Query psy16562
Match_columns 445
No_of_seqs 328 out of 2321
Neff 7.8
Searched_HMMs 29240
Date Sat Aug 17 00:22:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16562.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16562hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t6v_A Laccase; beta barrel, o 100.0 2.1E-70 7.2E-75 573.1 44.4 345 90-445 15-432 (495)
2 3pxl_A Laccase; 4-copper prote 100.0 4.9E-70 1.7E-74 570.5 45.2 353 58-445 4-430 (499)
3 1aoz_A Ascorbate oxidase; oxid 100.0 3.1E-70 1.1E-74 580.9 42.7 281 55-362 1-302 (552)
4 3sqr_A Laccase; multicopper ox 100.0 8.7E-70 3E-74 575.6 39.8 358 55-445 65-506 (580)
5 1zpu_A Iron transport multicop 100.0 3.5E-69 1.2E-73 569.7 40.1 347 56-445 1-443 (534)
6 1v10_A Laccase; multicopper bl 100.0 2.9E-68 1E-72 561.7 44.7 358 56-445 22-453 (521)
7 1hfu_A Laccase 1; oxidoreducta 100.0 1.5E-67 5E-72 554.4 42.6 341 90-445 15-432 (503)
8 2q9o_A Laccase-1; multicopper 100.0 1.4E-66 4.8E-71 552.9 43.2 278 54-362 30-316 (559)
9 2uxt_A Protein SUFI, SUFI; oxi 100.0 8.5E-65 2.9E-69 526.4 33.3 324 93-443 33-399 (451)
10 2xu9_A Laccase; oxidoreductase 100.0 3.9E-63 1.3E-67 512.8 33.6 340 55-445 14-402 (439)
11 3zx1_A Oxidoreductase, putativ 100.0 2.5E-62 8.6E-67 509.3 37.8 342 53-445 46-443 (481)
12 3od3_A Blue copper oxidase CUE 100.0 2.4E-62 8.1E-67 509.5 31.4 342 57-444 17-448 (488)
13 2wsd_A Spore coat protein A; o 100.0 7E-61 2.4E-65 504.7 36.2 334 91-445 39-471 (513)
14 3abg_A Bilirubin oxidase; clea 100.0 1.8E-60 6.3E-65 502.5 36.4 345 56-445 35-436 (534)
15 3aw5_A Multicopper oxidase; be 100.0 1.3E-61 4.6E-66 501.8 25.6 317 101-445 28-408 (448)
16 3gyr_A PHS, phenoxazinone synt 100.0 1.1E-59 3.7E-64 506.4 37.7 319 90-431 45-511 (612)
17 2g23_A PHS, phenoxazinone synt 100.0 1.4E-58 5E-63 492.5 36.6 333 55-430 30-510 (612)
18 3g5w_A Multicopper oxidase typ 100.0 5.7E-54 2E-58 425.8 33.9 266 57-362 2-278 (318)
19 2zwn_A Two-domain type laccase 100.0 1.7E-52 5.8E-57 419.1 35.5 267 56-362 2-279 (339)
20 1kbv_A ANIA, major outer membr 100.0 4.5E-49 1.5E-53 392.5 25.8 266 54-362 35-309 (327)
21 3gdc_A Multicopper oxidase; be 100.0 4.3E-48 1.5E-52 378.8 31.4 239 55-346 32-273 (288)
22 1mzy_A Copper-containing nitri 100.0 6.8E-46 2.3E-50 370.6 31.2 273 52-362 27-320 (333)
23 3kw8_A Laccase, putative coppe 100.0 1.7E-46 5.9E-51 365.3 26.0 230 53-353 3-260 (276)
24 1oe1_A Dissimilatory copper-co 100.0 2.9E-45 1E-49 366.5 32.0 271 54-362 29-320 (336)
25 2zoo_A Probable nitrite reduct 100.0 7.5E-46 2.6E-50 383.9 27.3 267 54-363 25-300 (442)
26 2j5w_A Ceruloplasmin, ferroxid 100.0 1.5E-45 5.1E-50 416.5 29.3 352 53-428 17-487 (1065)
27 2bw4_A Copper-containing nitri 100.0 2E-44 7E-49 360.9 29.4 270 54-362 35-326 (340)
28 3tas_A Small laccase, multi-co 100.0 1.7E-44 5.6E-49 357.4 25.4 205 96-346 28-256 (313)
29 3t9w_A Small laccase, multi-co 100.0 1.7E-44 5.9E-49 354.8 24.6 221 55-346 27-272 (299)
30 1sdd_A Coagulation factor V; c 100.0 9E-45 3.1E-49 358.2 7.5 219 98-346 49-285 (306)
31 1sdd_B Coagulation factor V; c 100.0 1.2E-42 4E-47 375.9 23.4 224 104-346 63-312 (647)
32 3cg8_A Laccase; oxidoreductase 100.0 3.4E-41 1.2E-45 337.3 24.8 237 53-361 44-307 (343)
33 2r7e_A Coagulation factor VIII 100.0 1E-42 3.5E-47 379.2 10.6 226 95-346 63-314 (742)
34 2r7e_B Coagulation factor VIII 100.0 1.4E-41 4.9E-46 370.9 16.1 269 54-346 130-441 (770)
35 2dv6_A Nitrite reductase; elec 100.0 1.2E-41 4.2E-46 352.8 14.6 308 98-445 44-395 (447)
36 2dv6_A Nitrite reductase; elec 100.0 3.4E-39 1.2E-43 334.5 28.6 248 93-362 178-435 (447)
37 2j5w_A Ceruloplasmin, ferroxid 100.0 2.1E-39 7E-44 366.4 14.4 320 96-445 616-1020(1065)
38 2r7e_A Coagulation factor VIII 100.0 3.4E-39 1.2E-43 351.6 3.5 222 104-346 446-696 (742)
39 2zwn_A Two-domain type laccase 99.9 1.5E-24 5.2E-29 216.5 9.6 179 244-445 22-233 (339)
40 3pxl_A Laccase; 4-copper prote 99.9 1.2E-22 4.2E-27 212.1 15.1 188 243-445 20-240 (499)
41 3t6v_A Laccase; beta barrel, o 99.9 1.6E-22 5.6E-27 211.1 14.9 188 243-445 21-243 (495)
42 3sqr_A Laccase; multicopper ox 99.9 2E-22 6.8E-27 213.4 13.8 184 243-445 84-307 (580)
43 3g5w_A Multicopper oxidase typ 99.9 5.2E-22 1.8E-26 196.4 13.3 180 245-445 22-232 (318)
44 1zpu_A Iron transport multicop 99.8 2.8E-21 9.6E-26 203.9 12.9 183 243-445 20-232 (534)
45 1v10_A Laccase; multicopper bl 99.8 5.5E-21 1.9E-25 201.2 14.5 187 244-445 42-266 (521)
46 1aoz_A Ascorbate oxidase; oxid 99.8 5.9E-21 2E-25 202.4 14.7 184 242-445 19-258 (552)
47 1hfu_A Laccase 1; oxidoreducta 99.8 6.1E-21 2.1E-25 200.1 14.7 187 243-445 21-239 (503)
48 2q9o_A Laccase-1; multicopper 99.8 7.3E-21 2.5E-25 201.8 13.0 182 245-445 55-269 (559)
49 3gdc_A Multicopper oxidase; be 99.8 1.8E-20 6E-25 183.0 12.6 180 244-445 53-250 (288)
50 2uxt_A Protein SUFI, SUFI; oxi 99.8 1.3E-20 4.3E-25 195.1 9.4 178 243-445 36-248 (451)
51 1kbv_A ANIA, major outer membr 99.8 2.6E-20 8.8E-25 185.0 10.2 173 244-445 57-268 (327)
52 3cg8_A Laccase; oxidoreductase 99.8 9.7E-20 3.3E-24 181.9 8.1 163 264-445 74-265 (343)
53 3t9w_A Small laccase, multi-co 99.8 3.6E-19 1.2E-23 174.5 10.7 164 264-445 55-246 (299)
54 3tas_A Small laccase, multi-co 99.8 4.2E-19 1.4E-23 175.2 10.3 165 264-445 39-230 (313)
55 3zx1_A Oxidoreductase, putativ 99.8 6.2E-19 2.1E-23 183.1 11.6 173 244-445 69-275 (481)
56 2xu9_A Laccase; oxidoreductase 99.8 4.7E-19 1.6E-23 182.8 8.4 176 244-445 34-242 (439)
57 3od3_A Blue copper oxidase CUE 99.8 6E-19 2E-23 183.3 8.9 177 244-445 35-249 (488)
58 3aw5_A Multicopper oxidase; be 99.8 6.6E-19 2.2E-23 182.0 7.6 173 248-445 28-239 (448)
59 3kw8_A Laccase, putative coppe 99.8 1.1E-18 3.8E-23 169.2 8.7 163 264-445 33-224 (276)
60 3abg_A Bilirubin oxidase; clea 99.7 2.5E-18 8.7E-23 181.1 10.0 174 244-445 56-273 (534)
61 2zoo_A Probable nitrite reduct 99.7 7.4E-18 2.5E-22 174.0 11.5 180 244-445 47-258 (442)
62 2wsd_A Spore coat protein A; o 99.7 8.9E-18 3E-22 176.5 9.7 183 244-445 45-296 (513)
63 3gyr_A PHS, phenoxazinone synt 99.7 2.1E-17 7E-22 177.3 11.3 177 245-445 53-332 (612)
64 1sdd_A Coagulation factor V; c 99.7 9.3E-18 3.2E-22 165.1 5.4 168 264-445 57-262 (306)
65 1sdd_B Coagulation factor V; c 99.7 4.2E-17 1.4E-21 176.1 10.7 171 264-445 66-289 (647)
66 2g23_A PHS, phenoxazinone synt 99.7 5.3E-17 1.8E-21 172.9 11.0 178 244-445 52-332 (612)
67 2bw4_A Copper-containing nitri 99.7 3.4E-16 1.2E-20 156.1 13.7 179 243-445 57-285 (340)
68 1mzy_A Copper-containing nitri 99.7 5.7E-16 1.9E-20 154.1 13.4 177 244-445 51-279 (333)
69 3cvb_A Plastocyanin; cupredoxi 99.6 1.4E-16 4.8E-21 131.4 4.9 89 105-199 14-105 (105)
70 1oe1_A Dissimilatory copper-co 99.6 2.7E-15 9.4E-20 149.3 14.5 178 244-445 52-279 (336)
71 2r7e_B Coagulation factor VIII 99.6 8.4E-16 2.9E-20 167.9 4.3 167 263-445 195-418 (770)
72 2cal_A Rusticyanin; iron respi 99.5 4.7E-14 1.6E-18 124.5 8.3 94 100-198 52-154 (154)
73 1iby_A Nitrosocyanin; RED copp 99.4 8.3E-13 2.9E-17 110.1 9.7 92 93-199 20-112 (112)
74 1fwx_A Nitrous oxide reductase 99.3 2.5E-12 8.5E-17 135.4 9.9 94 94-200 497-593 (595)
75 2ov0_A Amicyanin; beta-sandwic 99.2 1.1E-10 3.6E-15 96.2 10.2 80 103-198 26-105 (105)
76 2gim_A Plastocyanin; beta shee 99.0 7.6E-10 2.6E-14 90.9 7.9 82 109-198 19-105 (106)
77 2aan_A Auracyanin A; cupredoxi 98.9 7.4E-09 2.5E-13 89.4 10.0 91 106-198 31-139 (139)
78 4hci_A Cupredoxin 1; structura 98.8 1.8E-08 6.1E-13 81.9 8.5 85 98-198 16-100 (100)
79 2plt_A Plastocyanin; electron 98.7 1.7E-08 6E-13 81.4 7.1 80 110-198 18-98 (98)
80 1qhq_A Protein (auracyanin); e 98.7 2.5E-07 8.5E-12 79.8 12.6 92 106-198 29-139 (140)
81 1bxv_A Plastocyanin; copper pr 98.7 7.1E-08 2.4E-12 76.5 8.2 74 109-198 18-91 (91)
82 1pcs_A Plastocyanin; electron 98.6 7.9E-08 2.7E-12 77.5 8.1 81 109-198 18-98 (98)
83 3erx_A Pseudoazurin; copper pr 98.6 1.2E-07 4.2E-12 80.0 9.0 75 110-200 21-95 (123)
84 3tu6_A Pseudoazurin (blue copp 98.6 1.2E-07 4E-12 80.5 7.9 77 109-201 22-98 (127)
85 1b3i_A PETE protein, protein ( 98.5 1.2E-07 4.2E-12 76.2 6.9 77 110-198 19-97 (97)
86 1kdj_A Plastocyanin; electron 98.5 2.8E-07 9.6E-12 74.8 7.7 80 109-198 16-102 (102)
87 3ef4_A Pseudoazurin, blue copp 98.5 5.4E-07 1.8E-11 76.0 9.5 75 110-200 22-96 (124)
88 1byp_A Protein (plastocyanin); 98.5 5.1E-07 1.7E-11 72.9 8.8 77 110-198 17-99 (99)
89 1plc_A Plastocyanin; electron 98.5 6.2E-07 2.1E-11 72.4 8.8 77 110-198 17-99 (99)
90 1paz_A Pseudoazurin precursor; 98.3 2.1E-06 7.2E-11 72.4 8.8 76 109-200 20-95 (123)
91 1pmy_A Pseudoazurin; electron 98.3 1.9E-06 6.5E-11 72.7 8.1 76 109-200 20-95 (123)
92 3cvb_A Plastocyanin; cupredoxi 98.2 1.3E-06 4.4E-11 71.1 5.3 85 264-354 16-101 (105)
93 3c75_A Amicyanin; copper prote 98.2 8.8E-06 3E-10 69.4 9.7 79 104-198 54-132 (132)
94 1iuz_A Plastocyanin; electron 98.2 4.5E-06 1.5E-10 67.2 7.3 78 109-198 17-98 (98)
95 1iby_A Nitrosocyanin; RED copp 98.1 1.4E-05 4.6E-10 66.0 10.1 64 265-347 36-99 (112)
96 1cuo_A Protein (azurin ISO-2); 98.1 1.2E-05 4.2E-10 68.2 8.8 93 106-199 14-129 (129)
97 3ay2_A Lipid modified azurin p 98.0 3.8E-05 1.3E-09 68.0 11.5 93 106-199 54-167 (167)
98 1id2_A Amicyanin; beta barrel, 97.9 4.3E-05 1.5E-09 62.4 9.4 79 104-198 28-106 (106)
99 2ux6_A Pseudoazurin; type-1 co 97.9 3.5E-05 1.2E-09 64.8 8.0 73 110-200 21-93 (122)
100 2ccw_A Azurin II, AZN-2; elect 97.9 9.6E-05 3.3E-09 62.6 10.8 92 106-198 14-128 (129)
101 2aan_A Auracyanin A; cupredoxi 97.8 8.6E-05 2.9E-09 63.6 9.5 72 266-346 34-126 (139)
102 3sbq_A Nitrous-oxide reductase 97.8 6.9E-05 2.4E-09 77.8 9.6 95 92-199 538-637 (638)
103 2iaa_C Azurin; quinoprotein, t 97.7 8.4E-05 2.9E-09 62.9 7.9 91 106-198 13-127 (128)
104 1nwp_A Azurin; electron transp 97.7 0.00021 7.1E-09 60.5 10.2 91 106-198 14-128 (128)
105 1fwx_A Nitrous oxide reductase 97.6 0.00026 8.9E-09 74.6 12.0 67 264-347 510-577 (595)
106 4hci_A Cupredoxin 1; structura 97.6 0.00021 7.1E-09 57.5 8.7 70 267-355 28-98 (100)
107 2cal_A Rusticyanin; iron respi 97.6 0.00023 7.9E-09 62.2 9.4 94 247-355 52-152 (154)
108 2gim_A Plastocyanin; beta shee 97.3 5.8E-05 2E-09 61.3 1.5 82 266-353 19-101 (106)
109 2plt_A Plastocyanin; electron 96.9 0.003 1E-07 50.1 7.5 70 266-346 17-86 (98)
110 1qhq_A Protein (auracyanin); e 96.9 0.00071 2.4E-08 57.8 4.0 78 266-346 32-125 (140)
111 3fsa_A Azurin; copper, cupredo 96.8 0.0082 2.8E-07 50.2 9.8 88 107-198 15-125 (125)
112 2ov0_A Amicyanin; beta-sandwic 96.7 0.0022 7.4E-08 52.0 5.7 63 266-345 32-94 (105)
113 1pcs_A Plastocyanin; electron 96.7 0.0026 8.8E-08 50.5 6.0 76 266-353 18-94 (98)
114 1cuo_A Protein (azurin ISO-2); 96.7 0.0031 1.1E-07 53.2 6.7 81 266-346 17-115 (129)
115 1bxv_A Plastocyanin; copper pr 96.6 0.0069 2.3E-07 47.2 7.6 63 266-347 18-80 (91)
116 3ay2_A Lipid modified azurin p 96.6 0.0024 8.3E-08 56.3 5.4 89 266-355 57-164 (167)
117 2ccw_A Azurin II, AZN-2; elect 96.4 0.0044 1.5E-07 52.3 6.0 80 266-345 17-114 (129)
118 1nwp_A Azurin; electron transp 96.4 0.0074 2.5E-07 50.8 6.9 80 266-345 17-114 (128)
119 2iaa_C Azurin; quinoprotein, t 96.2 0.023 7.8E-07 47.8 9.2 79 266-345 16-113 (128)
120 1kdj_A Plastocyanin; electron 96.1 0.0067 2.3E-07 48.4 5.0 75 265-353 15-98 (102)
121 3erx_A Pseudoazurin; copper pr 96.0 0.0073 2.5E-07 50.5 5.0 69 266-353 20-89 (123)
122 1b3i_A PETE protein, protein ( 95.9 0.014 4.7E-07 46.1 6.3 75 266-353 18-93 (97)
123 2cua_A Protein (CUA); CUA cent 95.9 0.045 1.5E-06 46.4 9.5 72 110-198 60-134 (135)
124 3fsa_A Azurin; copper, cupredo 95.9 0.011 3.6E-07 49.5 5.4 80 266-345 17-114 (125)
125 1iuz_A Plastocyanin; electron 95.6 0.029 9.8E-07 44.5 7.0 72 264-346 15-86 (98)
126 1byp_A Protein (plastocyanin); 95.6 0.016 5.4E-07 45.9 5.2 77 266-353 16-95 (99)
127 3sbq_A Nitrous-oxide reductase 95.6 0.065 2.2E-06 55.8 11.0 66 264-347 555-622 (638)
128 1plc_A Plastocyanin; electron 95.4 0.018 6E-07 45.7 5.0 77 266-353 16-95 (99)
129 3tu6_A Pseudoazurin (blue copp 95.1 0.011 3.9E-07 49.6 3.0 62 266-346 22-83 (127)
130 3s8f_B Cytochrome C oxidase su 94.9 0.15 5E-06 44.8 9.6 74 110-199 93-168 (168)
131 3c75_A Amicyanin; copper prote 94.0 0.055 1.9E-06 45.5 4.8 63 266-345 59-121 (132)
132 3ef4_A Pseudoazurin, blue copp 93.7 0.042 1.4E-06 45.9 3.4 69 266-353 21-90 (124)
133 1id2_A Amicyanin; beta barrel, 93.2 0.096 3.3E-06 42.1 4.7 62 267-345 34-95 (106)
134 1paz_A Pseudoazurin precursor; 93.1 0.079 2.7E-06 44.0 4.2 60 266-347 20-82 (123)
135 1pmy_A Pseudoazurin; electron 93.0 0.077 2.6E-06 44.1 4.0 63 266-347 20-82 (123)
136 2cua_A Protein (CUA); CUA cent 92.8 0.74 2.5E-05 38.8 9.8 60 268-347 61-120 (135)
137 3s8f_B Cytochrome C oxidase su 91.4 1 3.6E-05 39.3 9.4 60 268-347 94-153 (168)
138 3isy_A Bsupi, intracellular pr 91.4 1 3.5E-05 37.1 8.8 73 273-346 16-102 (120)
139 2ux6_A Pseudoazurin; type-1 co 90.8 0.23 8E-06 41.1 4.4 61 266-345 20-80 (122)
140 2r39_A FIXG-related protein; s 74.5 5.1 0.00017 32.5 5.6 48 275-332 33-81 (118)
141 1cyx_A CYOA; electron transpor 72.5 17 0.00058 32.6 8.9 60 268-347 42-101 (205)
142 1cyx_A CYOA; electron transpor 56.8 13 0.00045 33.3 5.0 72 111-198 42-115 (205)
143 1xvs_A Protein APAG; MCSG APC2 51.8 19 0.00064 29.7 4.8 51 276-330 31-85 (126)
144 2f1e_A Protein APAG; APAG prot 49.3 21 0.00072 29.4 4.7 51 276-330 32-86 (127)
145 2gsm_B Cytochrome C oxidase su 48.6 49 0.0017 30.7 7.8 60 268-347 172-231 (262)
146 1tza_A APAG protein, SOR45; st 48.5 20 0.00068 29.9 4.5 51 276-330 31-85 (134)
147 1xq4_A Protein APAG; all beta 48.4 22 0.00077 29.8 4.8 51 276-330 36-90 (139)
148 3hb3_B Cytochrome C oxidase su 45.8 62 0.0021 30.7 8.1 61 267-347 189-249 (298)
149 1yew_A Particulate methane mon 43.1 29 0.001 33.7 5.3 76 119-196 267-378 (382)
150 1x9u_A Umecyanin; cupredoxin, 42.8 16 0.00055 29.6 3.0 36 166-201 71-107 (116)
151 1xwv_A DER F II; beta sheets, 41.7 41 0.0014 27.5 5.4 18 155-172 76-93 (129)
152 1nep_A EPV20, BNPC2, epididyma 40.2 31 0.0011 28.2 4.5 63 109-172 25-95 (130)
153 2r39_A FIXG-related protein; s 40.1 30 0.001 27.7 4.3 30 398-427 33-63 (118)
154 2p9r_A Alpha-2-M, alpha-2-macr 38.1 80 0.0027 24.2 6.5 68 271-345 13-84 (102)
155 1v54_B Cytochrome C oxidase po 37.0 61 0.0021 29.4 6.3 61 267-347 140-200 (227)
156 2gsm_B Cytochrome C oxidase su 34.8 47 0.0016 30.9 5.2 75 110-200 171-247 (262)
157 3isy_A Bsupi, intracellular pr 34.2 1.8E+02 0.0063 23.4 8.5 61 110-182 34-100 (120)
158 3rfr_A PMOB; membrane, oxidore 33.6 50 0.0017 32.4 5.3 76 119-196 301-410 (419)
159 3hb3_B Cytochrome C oxidase su 31.3 59 0.002 30.8 5.3 75 110-200 189-265 (298)
160 2wtp_A ORF131 protein, CZCE; m 27.3 30 0.001 28.6 2.2 19 268-286 72-90 (131)
161 1ws8_A Mavicyanin; oxidized fo 25.9 61 0.0021 25.7 3.8 35 166-200 71-105 (109)
162 1gui_A Laminarinase 16A; carbo 24.0 2.6E+02 0.0089 22.8 7.8 59 268-334 66-125 (155)
163 4ep8_B Urease subunit beta; al 23.9 86 0.003 24.5 4.1 63 268-332 12-83 (101)
164 3kmh_A D-lyxose isomerase; cup 23.9 1.7E+02 0.0057 26.7 6.6 65 267-343 129-194 (246)
165 4ubp_B Protein (urease (chain 23.1 80 0.0027 25.8 3.9 63 268-332 18-89 (126)
166 4ac7_B Urease subunit beta; hy 23.1 80 0.0027 25.8 3.9 63 268-332 18-89 (126)
167 2c34_A ICP, inhibitor of cyste 22.8 2.7E+02 0.0092 22.1 7.2 19 109-127 14-32 (116)
168 2wgn_B Inhibitor of cysteine p 22.3 3.1E+02 0.011 22.4 7.6 75 268-345 36-111 (132)
169 1fft_B Ubiquinol oxidase; elec 21.3 72 0.0025 30.4 3.9 60 268-347 152-211 (315)
170 2axw_A DRAD invasin; homodimer 20.0 3E+02 0.01 22.7 6.8 65 275-347 49-116 (134)
No 1
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=2.1e-70 Score=573.10 Aligned_cols=345 Identities=29% Similarity=0.551 Sum_probs=278.0
Q ss_pred eecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCC----CCceEeeCCcccCCCCCCCCCCcccccCCCCCCce
Q psy16562 90 CVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID----REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTF 165 (445)
Q Consensus 90 ~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~----~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~ 165 (445)
.+.+||++|.+|+|||++|||+|+|++||+|+|+|+|+|+. ++|||||||++|++++||||+|++|||||+||++|
T Consensus 15 ~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~sf 94 (495)
T 3t6v_A 15 DIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQCPIIVGNSF 94 (495)
T ss_dssp EECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEE
T ss_pred EEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCeE
Confidence 47799999999999999999999999999999999999984 37999999999999999999999999999999999
Q ss_pred EEEEec-CCCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEeeeeccCCCCccCCCCCCCCCCC
Q psy16562 166 RYKFPA-MPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIK 244 (445)
Q Consensus 166 ~Y~f~~-~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~ 244 (445)
+|+|++ .++||||||||.+.|+.+||+|+|||+++. ++...+|++|..|++|+++||+++..... . ......
T Consensus 95 tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~--~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~-~----~~~p~~ 167 (495)
T 3t6v_A 95 SYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPN--DPDANLYDVDDDTTIITLADWYHVLAKEM-G----AGGAIT 167 (495)
T ss_dssp EEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT--CTTGGGCSBCSGGGEEEEEEECSSCGGGS-C----SSSCCC
T ss_pred EEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCcc--ccccccCCCCCceeEEEEecccCCchhhh-c----cCCCCC
Confidence 999999 589999999999999999999999999874 35555688876688999999999865431 1 112247
Q ss_pred CCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCc
Q psy16562 245 PDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGD 324 (445)
Q Consensus 245 ~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGe 324 (445)
++++||||++.+.++ ....+.+.|+|++|++|||||||++.. +.+.|+|+||.|+||++||.+++|..++++.|+|||
T Consensus 168 ~d~~liNG~g~~~~~-~~~~~~~~~~v~~G~~~RlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGq 245 (495)
T 3t6v_A 168 ADSTLIDGLGRTHVN-VAAVPLSVITVEVGKRYRMRLVSISCD-PNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQ 245 (495)
T ss_dssp CSEEEETTBCCBSSS-CCCCCCCEEEECTTCEEEEEEEECCSS-CCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTC
T ss_pred CcEEEECCcCcCCCC-cccCCceEEEEcCCCEEEEEEEecCCC-eeEEEEECCCeEEEEEeCCcccCCEEeeeEEEcCce
Confidence 899999999764321 112456799999999999999999987 478999999999999999999999999999999999
Q ss_pred eEEEEEecCCCCceEEEEEEec--CCC---ceeeEEEEEcCCCCC-CCCCCCC--C---C--CC--------CC------
Q psy16562 325 RVDVIIHTNQSNNLYWMQAKTL--CDS---ITAEAVLQYEGEKLT-YVSKRPK--S---D--SF--------PR------ 377 (445)
Q Consensus 325 R~dv~v~~~~~~G~y~~~~~~~--~~~---~~~~ail~y~~~~~~-~~~~~P~--~---~--~~--------~~------ 377 (445)
||||+|++++++|+|||++... |.. ....|+|+|.+.... +....+. . . .+ +.
T Consensus 246 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~~~~L~p~~~~~~p~~~~~~~ 325 (495)
T 3t6v_A 246 RYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTKCLIETDLHPLSRNGVPGNPHQGG 325 (495)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSSBCCGGGCCBSSCCCCSSCSSTTC
T ss_pred EEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCccccccccccccccccCCCccCCCC
Confidence 9999999999889999999865 322 234699999875431 1100000 0 0 00 00
Q ss_pred ------------CCCC-CCCCCC-----c------------------cceeEeeCCcEEEEEEE-cCCCCccceEEEEeC
Q psy16562 378 ------------GKPK-DNSPRV-----P------------------MHFFKVQRDKRYLMRII-GGSCLACPLIFTIEK 420 (445)
Q Consensus 378 ------------~~~~-~~~~~~-----~------------------~~~~~v~~G~~~~~rli-N~s~~~Hp~~~hihg 420 (445)
+..+ .|+..+ + ...+.++.|++++|.|. |.+...||| ||||
T Consensus 326 ~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~--HLHG 403 (495)
T 3t6v_A 326 ADCNLNLSLGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPF--HLHG 403 (495)
T ss_dssp SSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEE--EETT
T ss_pred CcEEEEEEEEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcce--eecC
Confidence 0000 011111 0 11478899999999998 677788998 9999
Q ss_pred eeEEEEecCCccC----CCeEEeEEEecC
Q psy16562 421 HQLQVIASDGTAV----EPLVVDSVTLFP 445 (445)
Q Consensus 421 h~f~Vi~~dG~~~----~p~~~Dtv~v~p 445 (445)
|+|+|++.+|... .|.++||+.|.|
T Consensus 404 h~F~vl~~~g~~~~n~~~P~~rDtv~v~~ 432 (495)
T 3t6v_A 404 HDFAVSESASNSTSNYDDPIWRDVVSIGG 432 (495)
T ss_dssp CCEEEEECTTCCCCCSSSCCEESEEECCS
T ss_pred CcEEEEecCCCCCcccCCCCCccEEEcCC
Confidence 9999999988754 589999999864
No 2
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=4.9e-70 Score=570.45 Aligned_cols=353 Identities=30% Similarity=0.572 Sum_probs=284.6
Q ss_pred EEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCC----CCc
Q psy16562 58 CYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID----REV 133 (445)
Q Consensus 58 ~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~----~~t 133 (445)
..|+|+|++. .+.+||++|.+|+|||++|||+|+|++||+|+|+|+|+|+. ++|
T Consensus 4 ~~~~l~v~~~----------------------~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~t 61 (499)
T 3pxl_A 4 PVADLTITDA----------------------AVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKST 61 (499)
T ss_dssp SEEEEEEEEE----------------------EECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCB
T ss_pred ceEEEEEEEE----------------------EEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCce
Confidence 4688999864 47799999999999999999999999999999999999984 479
Q ss_pred eEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEec-CCCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCcccc
Q psy16562 134 TLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPA-MPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDF 212 (445)
Q Consensus 134 siHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~-~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~ 212 (445)
||||||++|++++||||+|++|||||+||++|+|+|++ .++||||||||.+.|+.+||+|+|||+++. ++....|++
T Consensus 62 siHwHGl~~~~~~~~DGv~~vtq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~--~~~~~~~~~ 139 (499)
T 3pxl_A 62 SIHWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPN--DPHASRYDV 139 (499)
T ss_dssp CEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTT--CTTGGGCSB
T ss_pred EEEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCc--ccccccCCC
Confidence 99999999999999999999999999999999999999 589999999999999999999999999874 345556888
Q ss_pred CCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEE
Q psy16562 213 DLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLI 292 (445)
Q Consensus 213 d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~ 292 (445)
|..|++|+++||+++..... ......++++||||++.+.++ ...+.+.|+|++|++|||||||++.. +.+.
T Consensus 140 d~~~~~l~l~Dw~~~~~~~~------~~~p~~~d~~liNG~~~~~~~--~~~~~~~~~v~~G~~~RlRliNa~~~-~~~~ 210 (499)
T 3pxl_A 140 DNDDTVITLADWYHTAAKLG------PRFPGGADATLINGKGRAPSD--SVAELSVIKVTKGKRYRFRLVSLSCN-PNHT 210 (499)
T ss_dssp CSGGGEEEEEEECSSCTTTS------CSSCSSCSEEEETTBCCCTTC--TTCCCCEEEECTTCEEEEEEEECCSS-CCEE
T ss_pred CCceEEEEEEcccCCccccc------cCCCCCCcEEEECCCCcCCCC--CCCCcceEEEcCCCEEEEEEEecCCC-eeEE
Confidence 76688999999999765431 112246899999999765321 22456799999999999999999987 4789
Q ss_pred EEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec--CCC---ceeeEEEEEcCCCCCCC-
Q psy16562 293 FTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CDS---ITAEAVLQYEGEKLTYV- 366 (445)
Q Consensus 293 ~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~~---~~~~ail~y~~~~~~~~- 366 (445)
|+|+||.|+||++||.+++|..++.+.|+|||||||+|++++++|+||+++... |.. ....|+|+|.+.....+
T Consensus 211 ~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~ 290 (499)
T 3pxl_A 211 FSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPT 290 (499)
T ss_dssp EEETTBCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCC
T ss_pred EEECCCeEEEEEECCcccCceEeeeEEECCCcEEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCC
Confidence 999999999999999999999999999999999999999999889999999865 322 23469999987643111
Q ss_pred CCC-CC------CC--CC-----C------------------CCCCC-CCCCCC-----c------------------cc
Q psy16562 367 SKR-PK------SD--SF-----P------------------RGKPK-DNSPRV-----P------------------MH 390 (445)
Q Consensus 367 ~~~-P~------~~--~~-----~------------------~~~~~-~~~~~~-----~------------------~~ 390 (445)
... +. .. .+ + .+..+ .|+..+ + ..
T Consensus 291 ~~~~~~~~~~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~ 370 (499)
T 3pxl_A 291 TNQTTSVKPLNEVDLHPLVSTPVPGAPSSGGVDKAINMAFNFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGS 370 (499)
T ss_dssp CCCCCCSSBCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTS
T ss_pred CCCCCCCcccccccccccccccCCCcccCCCCcEEEEEEEEecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCce
Confidence 000 00 00 00 0 00000 111111 0 12
Q ss_pred eeEeeCCcEEEEEEE---cCCCCccceEEEEeCeeEEEEecCCccC----CCeEEeEEEecC
Q psy16562 391 FFKVQRDKRYLMRII---GGSCLACPLIFTIEKHQLQVIASDGTAV----EPLVVDSVTLFP 445 (445)
Q Consensus 391 ~~~v~~G~~~~~rli---N~s~~~Hp~~~hihgh~f~Vi~~dG~~~----~p~~~Dtv~v~p 445 (445)
.+.++.|++++|.|. |.+...||| |||||+|+|++.+|... .|.++||+.|.|
T Consensus 371 v~~~~~g~~V~ivl~~~~n~~~~~HP~--HLHGh~F~Vl~~~g~~~~n~~~P~~rDtv~v~~ 430 (499)
T 3pxl_A 371 VYVLPSNASIEISFPATAAAPGAPHPF--HLHGHTFAVVRSAGSTVYNYDNPIFRDVVSTGT 430 (499)
T ss_dssp EEEECTTCEEEEEEECCTTSCSCSCEE--EETTCCEEEEECTTCCCCCSSSCCEESEEECCC
T ss_pred eEEecCCCEEEEEEecCcccCCCCccc--eecCCcEEEEeccCCcccccCCCCccceEEcCC
Confidence 478899999999999 667788998 99999999999887654 489999999864
No 3
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=3.1e-70 Score=580.93 Aligned_cols=281 Identities=31% Similarity=0.603 Sum_probs=238.8
Q ss_pred CceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCce
Q psy16562 55 PLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVT 134 (445)
Q Consensus 55 p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ts 134 (445)
+++++|+|+|++. .+.+||.++.+|+|||++|||+|+|++||+|+|+|+|+|+.++|+
T Consensus 1 ~~~~~y~~~v~~~----------------------~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~ts 58 (552)
T 1aoz_A 1 SQIRHYKWEVEYM----------------------FWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVV 58 (552)
T ss_dssp CCEEEEEEEEEEE----------------------EECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBC
T ss_pred CeEEEEEEEEEEE----------------------EEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCee
Confidence 5789999999963 467899999999999999999999999999999999999768999
Q ss_pred EeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccccCC
Q psy16562 135 LHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDL 214 (445)
Q Consensus 135 iHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~ 214 (445)
|||||++|.+++||||+|++|||+|+||++|+|+|++.++||||||||.+.|+++||+|+|||++++.. ..++++|
T Consensus 59 iHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~---~~~~~~d- 134 (552)
T 1aoz_A 59 IHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGK---KEPFHYD- 134 (552)
T ss_dssp EEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEEECSTTTGGGTCEEEEEEECCTTC---CCSSCCS-
T ss_pred EEeCCCccCCCcccCCCcccccCCcCCCCeEEEEEECCCCEEEEEEECchhHHhccCeeeEEEeCCccc---CCCCCCC-
Confidence 999999999999999999999999999999999999999999999999999999999999999987432 2345666
Q ss_pred cceEEEEeeeeccCCCCccCCCCCC--CCCCCCCeEEEccccCCCCCC---------------CCCcccceEEEecCcEE
Q psy16562 215 YSHVIIVTDWMHSMTDSKFPGNTYN--DTRIKPDAILINGQNQNPKDN---------------SPRVPMHFFKVQRDKRY 277 (445)
Q Consensus 215 ~e~~l~l~D~~~~~~~~~~~~~~~~--~~~~~~~~~lING~~~~~~~~---------------~~~~p~~~i~v~~G~~~ 277 (445)
.|++|+|+||++......+...... .....++.+||||++.+++.. ....+.+.++|++|++|
T Consensus 135 ~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~ 214 (552)
T 1aoz_A 135 GEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTY 214 (552)
T ss_dssp EEEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEE
T ss_pred ccceEEeecccCCCHHHHHhhhhcccccCCCCCCeEEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEE
Confidence 4899999999987654322111100 111357899999998763210 11123458999999999
Q ss_pred EEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEec-CCCCceEEEEEEec-C--CCceee
Q psy16562 278 LMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHT-NQSNNLYWMQAKTL-C--DSITAE 353 (445)
Q Consensus 278 rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~-~~~~G~y~~~~~~~-~--~~~~~~ 353 (445)
||||||++.. +.+.|+|+||.|+||++||++++|..++++.|+|||||||+|++ ++.+|+||++++.. | ....+.
T Consensus 215 RlRliNa~~~-~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~~~~~~~~ 293 (552)
T 1aoz_A 215 RIRIASTTAL-AALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGL 293 (552)
T ss_dssp EEEEEECCSS-CEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCCEE
T ss_pred EEEEEccccc-ceEEEEEcCcEEEEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCCCCCccEE
Confidence 9999999987 58999999999999999999999999999999999999999999 56679999999886 4 445678
Q ss_pred EEEEEcCCC
Q psy16562 354 AVLQYEGEK 362 (445)
Q Consensus 354 ail~y~~~~ 362 (445)
|+|+|.+..
T Consensus 294 ail~y~~~~ 302 (552)
T 1aoz_A 294 TLLNYLPNS 302 (552)
T ss_dssp EEEEETTSC
T ss_pred EEEEECCCC
Confidence 999998765
No 4
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=8.7e-70 Score=575.57 Aligned_cols=358 Identities=28% Similarity=0.461 Sum_probs=281.2
Q ss_pred CceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCce
Q psy16562 55 PLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVT 134 (445)
Q Consensus 55 p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ts 134 (445)
.++++|+|+|++. .+.+||+++.+|+|||++|||+|+|++||+|+|+|+|+|+.++|+
T Consensus 65 ~~~~~~~l~v~~~----------------------~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~ts 122 (580)
T 3sqr_A 65 GVTREYWLSVENS----------------------TITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTS 122 (580)
T ss_dssp CCEEEEEEEEEEE----------------------EECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBC
T ss_pred ceEEEEEEEEEEE----------------------EecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcce
Confidence 5677777777763 367899999999999999999999999999999999999867999
Q ss_pred EeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccccCC
Q psy16562 135 LHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDL 214 (445)
Q Consensus 135 iHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~ 214 (445)
|||||++|.+++||||+|++|||||+||++|+|+|++.++||||||||.+.|+.+||+|+|||+++.. ..||.|
T Consensus 123 IHwHGl~~~~t~~~DGvp~vTq~pI~PG~sftY~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~-----~~yD~d- 196 (580)
T 3sqr_A 123 IHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPAT-----ADYDED- 196 (580)
T ss_dssp EEETTCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCCCEEEEEEECSTTGGGGTCEEEEEEECCCS-----SCCSEE-
T ss_pred EEecccccCCCccccCCCccccCCCCCCCeEEEEEECCCCcceEEeecccccccCcCEEEEEeeCccc-----CCCCcc-
Confidence 99999999999999999999999999999999999999999999999999999999999999998743 235554
Q ss_pred cceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCC------CCCCcccceEEEecCcEEEEEEEccCCCc
Q psy16562 215 YSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKD------NSPRVPMHFFKVQRDKRYLMRIIGGSCLA 288 (445)
Q Consensus 215 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~------~~~~~p~~~i~v~~G~~~rlRliN~~~~~ 288 (445)
..+|+|+||+++...+.+.. ....+...++++||||++.+.+. +......+.++|++|++|||||||++...
T Consensus 197 -~~~l~l~Dw~~~~~~~~~~~-~~~~~~~~~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~ 274 (580)
T 3sqr_A 197 -VGVIFLQDWAHESVFEIWDT-ARLGAPPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDS 274 (580)
T ss_dssp -EEEEEEEEECSSCHHHHHHH-HTTSCCCCBSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSC
T ss_pred -ceEEEEEEEecCCHHHHHHH-HhccCCCCCceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCc
Confidence 24999999999865442221 11234567899999999876431 12234568999999999999999999874
Q ss_pred eeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec--CC----CceeeEEEEEcCCC
Q psy16562 289 CPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CD----SITAEAVLQYEGEK 362 (445)
Q Consensus 289 ~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~----~~~~~ail~y~~~~ 362 (445)
.+.|+|+||.|+||++||.+++|..++++.|+|||||||+|++++.+|+|||++... |. .....|||+|.+..
T Consensus 275 -~~~~~i~gh~~~VIa~DG~~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~ 353 (580)
T 3sqr_A 275 -HFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSS 353 (580)
T ss_dssp -CEEEEETTCCEEEEEETTEEEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTC
T ss_pred -eeeEEeCCceEEEEEeCCccCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCC
Confidence 899999999999999999999999999999999999999999999889999999876 42 23578999998754
Q ss_pred CCCCCCCC-CCC---------CC-C---CCC------------------CC-CCCCCC------c-------------c-
Q psy16562 363 LTYVSKRP-KSD---------SF-P---RGK------------------PK-DNSPRV------P-------------M- 389 (445)
Q Consensus 363 ~~~~~~~P-~~~---------~~-~---~~~------------------~~-~~~~~~------~-------------~- 389 (445)
...+...+ ... .+ + ... .+ .|+..+ | .
T Consensus 354 ~~~P~~~~~~~~~~~~~~~~~~L~P~~~~~~~~~~~~~~~l~~~~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~ 433 (580)
T 3sqr_A 354 IANPTSVGTTPRGTCEDEPVASLVPHLALDVGGYSLVDEQVSSAFTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTE 433 (580)
T ss_dssp CCCCCCCCCCCCCCSCCSCGGGCCBSSCCBCCSEEEEEEEEEEEESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGG
T ss_pred CCCCCCCCCCccchhhcccccccccCCCCCCCCccceEEEEEeccCCceeEEECCEecccCCCCCchhhhhcCCccCCCC
Confidence 32111000 000 00 0 000 00 011111 0 0
Q ss_pred -ceeEe----eCCcEEEEEEEcCC--CCccceEEEEeCeeEEEEecCCc------------cCCCeEEeEEEecC
Q psy16562 390 -HFFKV----QRDKRYLMRIIGGS--CLACPLIFTIEKHQLQVIASDGT------------AVEPLVVDSVTLFP 445 (445)
Q Consensus 390 -~~~~v----~~G~~~~~rliN~s--~~~Hp~~~hihgh~f~Vi~~dG~------------~~~p~~~Dtv~v~p 445 (445)
..+.+ +.|++++|.|.|.+ ...||| |||||+|+||+.+.. ...|.++||+.|.|
T Consensus 434 ~~~~~~~~~~~~~~~VeiVi~n~~~~~~~HP~--HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~ 506 (580)
T 3sqr_A 434 YNVVALEQTNANEEWVVYVIEDLTGFGIWHPI--HLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPG 506 (580)
T ss_dssp GCEEEECC----CCEEEEEEEECSSSCCCEEE--EESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECT
T ss_pred cceeecccccCCCcEEEEEEeCCCccccceee--EecCceEEEEecCCCccCccccccccccCCCceeeEEEeCC
Confidence 01233 45999999999987 678888 999999999988432 12378999999975
No 5
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-69 Score=569.68 Aligned_cols=347 Identities=27% Similarity=0.435 Sum_probs=280.4
Q ss_pred ceEEEEEEEEEeeecCccccccCCCcccccccceeecCCC-eEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCce
Q psy16562 56 LVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADG-FERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVT 134 (445)
Q Consensus 56 ~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG-~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ts 134 (445)
++++|+|+|++. .+.+|| .++.+|+|||++|||+|+|++||+|+|+|+|+|+.++|+
T Consensus 1 ~~~~~~~~v~~~----------------------~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~ts 58 (534)
T 1zpu_A 1 ETHTFNWTTGWD----------------------YRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTS 58 (534)
T ss_dssp CEEEEEEEEEEE----------------------EECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBC
T ss_pred CEEEEEEEEEEE----------------------EecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCee
Confidence 478999999974 357899 799999999999999999999999999999999878999
Q ss_pred EeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC-CCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccccC
Q psy16562 135 LHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM-PSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFD 213 (445)
Q Consensus 135 iHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~-~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d 213 (445)
|||||++|.+++||||+|++|||||+||++|+|+|++. ++||||||||.+.|+++||+|+|||+++. +| +++|
T Consensus 59 iHwHG~~~~~~~~~DG~~~vtq~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~--~p----~~~d 132 (534)
T 1zpu_A 59 MHFHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDS--FP----YDYD 132 (534)
T ss_dssp CEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTT--CC----SCCS
T ss_pred EEcCCcccCCCCcccCCCccccCCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCC--CC----CCCc
Confidence 99999999998999999999999999999999999999 99999999999999999999999999874 23 2444
Q ss_pred CcceEEEEeeeeccCCCCcc---CCCCC-CCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCce
Q psy16562 214 LYSHVIIVTDWMHSMTDSKF---PGNTY-NDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLAC 289 (445)
Q Consensus 214 ~~e~~l~l~D~~~~~~~~~~---~~~~~-~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~ 289 (445)
.|++|+|+||+++...+.+ ..... ......++.+||||+.. +.++|++|++|||||||++.. +
T Consensus 133 -~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~g~~~~~d~~liNG~~~-----------~~~~v~~g~~~RlRliNa~~~-~ 199 (534)
T 1zpu_A 133 -EELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNTMN-----------LTWEVQPDTTYLLRIVNVGGF-V 199 (534)
T ss_dssp -EEEEEEEEEECSSCHHHHHHHHSSTTCTTCCCCCCSEEEETTBSS-----------CEEECCSSCEEEEEEEECCSS-C
T ss_pred -ceEEEEeeccccCCHHHHHHHHhccccCCCCCCCCceEEECCCCc-----------eEEEEECCCEEEEEEEeccCC-c
Confidence 3799999999998654321 11111 12345789999999964 489999999999999999987 4
Q ss_pred eEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCC-CceEEEEEEec--C-------CCceeeEEEEEc
Q psy16562 290 PLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQS-NNLYWMQAKTL--C-------DSITAEAVLQYE 359 (445)
Q Consensus 290 ~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~-~G~y~~~~~~~--~-------~~~~~~ail~y~ 359 (445)
.+.|+|++|.|+||++||++++|..++.+.|+|||||||+|++++. .|+||+++... + ......++|+|.
T Consensus 200 ~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~ 279 (534)
T 1zpu_A 200 SQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYN 279 (534)
T ss_dssp CEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESC
T ss_pred eEEEEEcCCeeEEEeccCcCccccEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeC
Confidence 7999999999999999999999999999999999999999999864 47899998765 2 134567999998
Q ss_pred CCCCCCCC----CCCC-CC----------CC-----------------CCCC--CCCCCCCCc-----------------
Q psy16562 360 GEKLTYVS----KRPK-SD----------SF-----------------PRGK--PKDNSPRVP----------------- 388 (445)
Q Consensus 360 ~~~~~~~~----~~P~-~~----------~~-----------------~~~~--~~~~~~~~~----------------- 388 (445)
+....+.+ ..+. .+ .+ .++. ...|+..+.
T Consensus 280 ~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~ 359 (534)
T 1zpu_A 280 KTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQA 359 (534)
T ss_dssp TTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGT
T ss_pred CCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeecccCccc
Confidence 76432110 1111 00 00 0000 001111110
Q ss_pred ---------cceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCc--------------------cCCCeEEe
Q psy16562 389 ---------MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGT--------------------AVEPLVVD 439 (445)
Q Consensus 389 ---------~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~--------------------~~~p~~~D 439 (445)
...+.++.|++++|.|.|.+.+.||| |||||+|+||++++. ...|.|||
T Consensus 360 ~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~--HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RD 437 (534)
T 1zpu_A 360 NNSEIYGSNTHTFILEKDEIVEIVLNNQDTGTHPF--HLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRD 437 (534)
T ss_dssp TCGGGGCSSSCEEEECTTCEEEEEEEECSSSCEEE--EETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEES
T ss_pred CCCcccCCCceEEEeCCCCEEEEEEeCCCCCCCCe--EecCCceEEEeecCCccccccCcccccCccccccccCCCCeee
Confidence 12478999999999999999899998 999999999998853 12378999
Q ss_pred EEEecC
Q psy16562 440 SVTLFP 445 (445)
Q Consensus 440 tv~v~p 445 (445)
||.|.|
T Consensus 438 Tv~V~p 443 (534)
T 1zpu_A 438 TLYVRP 443 (534)
T ss_dssp EEEECT
T ss_pred EEEeCC
Confidence 999975
No 6
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=2.9e-68 Score=561.66 Aligned_cols=358 Identities=31% Similarity=0.555 Sum_probs=284.4
Q ss_pred ceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCe-EEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCC----
Q psy16562 56 LVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGF-ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID---- 130 (445)
Q Consensus 56 ~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~-~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~---- 130 (445)
...+|+|+|++. .+.+||+ ++.+|+|||++|||+|+|++||+|+|+|+|+|+.
T Consensus 22 ~~~~~~l~i~~~----------------------~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~ 79 (521)
T 1v10_A 22 ATVALDLHILNA----------------------NLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMR 79 (521)
T ss_dssp CCSEEEEEEEEE----------------------EECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSC
T ss_pred cCceEEEEEEEE----------------------EEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCC
Confidence 455799998863 4678999 9999999999999999999999999999999983
Q ss_pred CCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEec-CCCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCc
Q psy16562 131 REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPA-MPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAEL 209 (445)
Q Consensus 131 ~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~-~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~ 209 (445)
++|||||||+++.+++||||+|++|||||+||++|+|+|++ .++||||||||.+.|+++||+|+|||+++. ++....
T Consensus 80 ~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~--~~~~~~ 157 (521)
T 1v10_A 80 RATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPN--DPHLSL 157 (521)
T ss_dssp CCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT--CTTGGG
T ss_pred CCceEecCCeeccCCCccCCCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCc--cccccc
Confidence 79999999999998899999999999999999999999995 689999999999999999999999999874 344456
Q ss_pred cccCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCce
Q psy16562 210 YDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLAC 289 (445)
Q Consensus 210 ~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~ 289 (445)
|+.|..|++|+|+||+++...+.... .......++.++|||++.+.+. ....+.+.++|++|++|||||||++.. +
T Consensus 158 ~~~d~~e~~l~l~D~~~~~~~~~~~~--~~~~~~~~d~~liNG~~~~~~~-~~~~~~~~~~v~~G~~~RlRliNa~~~-~ 233 (521)
T 1v10_A 158 YDVDDASTVITIADWYHSLSTVLFPN--PNKAPPAPDTTLINGLGRNSAN-PSAGQLAVVSVQSGKRYRFRIVSTSCF-P 233 (521)
T ss_dssp CSBCSGGGEEEEEEECSSCCC---------CCCSCCSEEEETTBCCCSSC-GGGSCCCEEEECTTCEEEEEEEECCSS-C
T ss_pred CCCCCceeEEEEcccccCCHHHHhhc--cCCCCCCCCEEEECCcccCCCC-CCCCCceEEEECCCCEEEEEEEecCCc-c
Confidence 77765689999999999877653211 1122356899999999874321 112345799999999999999999987 4
Q ss_pred eEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec--CCC---ceeeEEEEEcCCCCC
Q psy16562 290 PLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CDS---ITAEAVLQYEGEKLT 364 (445)
Q Consensus 290 ~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~~---~~~~ail~y~~~~~~ 364 (445)
.+.|+|+||.|+||++||.+++|..++++.|+|||||||+|++++.+|+||++++.. +.. ....++|+|.+....
T Consensus 234 ~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~ 313 (521)
T 1v10_A 234 NYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVA 313 (521)
T ss_dssp CEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSC
T ss_pred cEEEEECCCeEEEEecCCccccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCC
Confidence 899999999999999999999999999999999999999999998789999999875 221 123589999875432
Q ss_pred -CCCC-------------------CCCC------C---CCC---CCC--CC-CCCCCCc---------------------
Q psy16562 365 -YVSK-------------------RPKS------D---SFP---RGK--PK-DNSPRVP--------------------- 388 (445)
Q Consensus 365 -~~~~-------------------~P~~------~---~~~---~~~--~~-~~~~~~~--------------------- 388 (445)
+... .|.. + .+. ++. .+ .|+..+.
T Consensus 314 ~p~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~ 393 (521)
T 1v10_A 314 EPTTSQNSGTALNEANLIPLINPGAPGNPVPGGADINLNLRIGRNATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLL 393 (521)
T ss_dssp CCCCCCCCSCBCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEECCSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSS
T ss_pred CCCCCCCcccccchhhcccCCcccCCCcccCCcceEEEEEEEecCCceeEEEECCCcccCCCCchhhhhhcCCcccccCC
Confidence 1100 0000 0 000 000 11 1111111
Q ss_pred --cceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccC----CCeEEeEEEe-cC
Q psy16562 389 --MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV----EPLVVDSVTL-FP 445 (445)
Q Consensus 389 --~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~----~p~~~Dtv~v-~p 445 (445)
...+.++.|++++|.++| .+.||| |||||+|+|++++|... .|.|||||.| .|
T Consensus 394 ~~~~~~~v~~g~~vei~l~N--~~~HP~--HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~ 453 (521)
T 1v10_A 394 PGGAVISLPANQVIEISIPG--GGNHPF--HLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGG 453 (521)
T ss_dssp STTTEEEECTTCEEEEEEEC--CBSCEE--EESSCCEEEEECTTCSCCCCSSCCEESEEECCBS
T ss_pred CCceEEEecCCCEEEEEEcC--CCCCCE--EEccceEEEEecCCCCccccCCCCeeeeEEeCCC
Confidence 124678999999999999 678998 99999999999998763 4899999999 54
No 7
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=1.5e-67 Score=554.35 Aligned_cols=341 Identities=34% Similarity=0.593 Sum_probs=274.6
Q ss_pred eecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCC----CCceEeeCCcccCCCCCCCCCCcccccCCCCCCce
Q psy16562 90 CVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID----REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTF 165 (445)
Q Consensus 90 ~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~----~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~ 165 (445)
.+.+||+++.+|+|||++ ||+|+|++||+|+|+|+|+|+. ++|||||||+++.+++||||+|++|||||+||++|
T Consensus 15 ~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq~~I~PG~~~ 93 (503)
T 1hfu_A 15 NVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHAF 93 (503)
T ss_dssp EECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEE
T ss_pred EECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccccCCcCCCCeE
Confidence 467899999999999999 9999999999999999999983 79999999999998889999999999999999999
Q ss_pred EEEEec-CCCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEeeeeccCCCCccCCCCCCCCCCC
Q psy16562 166 RYKFPA-MPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIK 244 (445)
Q Consensus 166 ~Y~f~~-~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~ 244 (445)
+|+|++ .++||||||||.+.|+++||+|+|||+++. ++....|+.|..|++|+|+||+++...+. . . ...
T Consensus 94 ~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~--~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~-~-~-----~~~ 164 (503)
T 1hfu_A 94 LYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDN--DPHAALYDEDDENTIITLADWYHIPAPSI-Q-G-----AAQ 164 (503)
T ss_dssp EEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTT--CTTGGGCSBCSTTSEEEEEEECSSCGGGC-C---------C
T ss_pred EEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCC--CCcccCCCCCCceEEEEEcccccCChHHh-c-C-----CCC
Confidence 999994 689999999999999999999999999874 34445677765689999999999876542 1 1 146
Q ss_pred CCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCc
Q psy16562 245 PDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGD 324 (445)
Q Consensus 245 ~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGe 324 (445)
++.+||||++.+.+ ....+.+.|+|++|++|||||||++.. +.+.|+|++|.|+||++||.+++|..++++.|+|||
T Consensus 165 ~d~~liNG~~~~~~--~~~~~~~~~~v~~g~~~RlRliN~~~~-~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pge 241 (503)
T 1hfu_A 165 PDATLINGKGRYVG--GPAAELSIVNVEQGKKYRMRLISLSCD-PNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQ 241 (503)
T ss_dssp CSEEEETTBCCBTT--CCCCCCCEEEECTTCEEEEEEEECCSS-CCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTC
T ss_pred CCEEEECcccccCC--CCCCcceEEEEcCCCEEEEEEEecCCc-ccEEEEEcCceEEEEeccCccccccccCeEEEcccc
Confidence 89999999987532 123445899999999999999999987 479999999999999999999999999999999999
Q ss_pred eEEEEEecCCCCceEEEEEEec--CCC-------ceeeEEEEEcCCCCC-CCCC-CCCC------C-------CCCC---
Q psy16562 325 RVDVIIHTNQSNNLYWMQAKTL--CDS-------ITAEAVLQYEGEKLT-YVSK-RPKS------D-------SFPR--- 377 (445)
Q Consensus 325 R~dv~v~~~~~~G~y~~~~~~~--~~~-------~~~~ail~y~~~~~~-~~~~-~P~~------~-------~~~~--- 377 (445)
||||+|++++.+|+||+++... +.. ....++|+|.+.... +... .|.. . ..+.
T Consensus 242 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~~~l~~~~l~p~~~~~~p~~~~ 321 (503)
T 1hfu_A 242 RYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNPAQLNEADLHALIDPAAPGIPT 321 (503)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSCCBCCGGGCBBSSSCSCSSCSS
T ss_pred eEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCccCCCccccccccCccCCCCccc
Confidence 9999999998789999999865 111 123689999876432 1110 0100 0 0000
Q ss_pred --C-------------CCC-CCCCCCc-----------------------cceeEeeCCcEEEEEEE-cCCCCccceEEE
Q psy16562 378 --G-------------KPK-DNSPRVP-----------------------MHFFKVQRDKRYLMRII-GGSCLACPLIFT 417 (445)
Q Consensus 378 --~-------------~~~-~~~~~~~-----------------------~~~~~v~~G~~~~~rli-N~s~~~Hp~~~h 417 (445)
. ..+ .|+..+. ...+.++.|+++++.++ |.+.+.||| |
T Consensus 322 ~~~~~~~~~l~~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~--H 399 (503)
T 1hfu_A 322 PGAADVNLRFQLGFSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPRNQVVELVVPAGVLGGPHPF--H 399 (503)
T ss_dssp TTCSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECSSCEEEEEEECCSTTCCCEE--E
T ss_pred CCcceEEEEEEeeccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccCCCEEEEEEECCCCCCCCCE--E
Confidence 0 000 1111110 12467899999999999 456788998 9
Q ss_pred EeCeeEEEEecCCccC----CCeEEeEEEe-cC
Q psy16562 418 IEKHQLQVIASDGTAV----EPLVVDSVTL-FP 445 (445)
Q Consensus 418 ihgh~f~Vi~~dG~~~----~p~~~Dtv~v-~p 445 (445)
||||+|+|++++|... .|.|||||.| .|
T Consensus 400 LHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~pp 432 (503)
T 1hfu_A 400 LHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVT 432 (503)
T ss_dssp ETTCCEEEEECTTCCCCCCSSBCEESEEECCST
T ss_pred EecceEEEEecCCCCccccCCCCeeeeEEecCC
Confidence 9999999999998763 4899999999 54
No 8
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=1.4e-66 Score=552.92 Aligned_cols=278 Identities=31% Similarity=0.496 Sum_probs=236.4
Q ss_pred CCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeE-EEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCC
Q psy16562 54 KPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFE-RAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDRE 132 (445)
Q Consensus 54 ~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~-~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ 132 (445)
..++++|+|++++.. ..+.+||++ +.+|+|||++|||+|+|++||+|+|+|+|+|+.++
T Consensus 30 ~~~~~~~~l~~~~~~--------------------~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~ 89 (559)
T 2q9o_A 30 TGVTQSYVFNLTEVD--------------------NWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNG 89 (559)
T ss_dssp CCCEEEEEEEEEEEE--------------------EEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCC
T ss_pred CCeEEEEEEEEEEeE--------------------eeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCC
Confidence 456788999888642 236689998 99999999999999999999999999999996589
Q ss_pred ceEeeCCcccCCCCCCCCCCcccccCCCC-CCceEEEEecCCCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccc
Q psy16562 133 VTLHWHGVYQKVTPWMDGVPMVTQCPIPS-STTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYD 211 (445)
Q Consensus 133 tsiHwHG~~~~~~~~~DGvp~~tq~pI~p-G~~~~Y~f~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d 211 (445)
|||||||+++.+++||||+|++|||||+| |++|+|+|++.++||||||||.+.|+++||+|+|||+++.. ..||
T Consensus 90 tsiHwHG~~~~~~~~~DG~~~~tq~~I~P~G~~~~Y~f~~~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~-----~~~d 164 (559)
T 2q9o_A 90 TSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQINGPAS-----LPYD 164 (559)
T ss_dssp BCEEEETCCCTTCGGGSCCBTTTBCCBCTTTEEEEEEEECCSCEEEEEEECSTTGGGGTCEEEEEEECCCS-----SCCS
T ss_pred ceEEcCCCccCCCCCcCCCCccccCccCCCCCeEEEEEECCCCEEEEEEEcccchhcCCceEEEEecCCCc-----CCCc
Confidence 99999999999889999999999999999 99999999999999999999999999999999999998743 2355
Q ss_pred cCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeE
Q psy16562 212 FDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPL 291 (445)
Q Consensus 212 ~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~ 291 (445)
.| ..+|+|+||+++...+.+... .......++.++|||+..+.+ ..+...+.++|++|++|||||||++.. +.+
T Consensus 165 ~d--~~~l~l~Dw~~~~~~~~~~~~-~~~~~~~~d~~liNG~~~~~~--~~~g~~~~~~v~~g~~~RlRliNa~~~-~~~ 238 (559)
T 2q9o_A 165 ID--LGVFPITDYYYRAADDLVHFT-QNNAPPFSDNVLINGTAVNPN--TGEGQYANVTLTPGKRHRLRILNTSTE-NHF 238 (559)
T ss_dssp EE--EEEEEEEEECSSCHHHHHHHH-TTSCCCCBSEEEETTBCBCTT--TCCBCCCEEEECTTCEEEEEEEECCSS-CCE
T ss_pred cc--ceEEEEeccccCCHHHHhhhh-hcCCCCccceeEECCccccCc--CCCCCceEEEEcCCCEEEEEEEecCCC-ceE
Confidence 44 249999999998665422111 112345689999999987532 122345789999999999999999987 478
Q ss_pred EEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe--c--C---CCceeeEEEEEcCCC
Q psy16562 292 IFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT--L--C---DSITAEAVLQYEGEK 362 (445)
Q Consensus 292 ~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~--~--~---~~~~~~ail~y~~~~ 362 (445)
.|+|+||.|+||++||.+++|..++.+.|+|||||||+|++++.+|+||+++.. . | ......++|+|.+..
T Consensus 239 ~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~ 316 (559)
T 2q9o_A 239 QVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAP 316 (559)
T ss_dssp EEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSC
T ss_pred EEEECCCceEEEecCCcccCceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCC
Confidence 999999999999999999999999999999999999999999888999999987 3 3 334568999998764
No 9
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=8.5e-65 Score=526.39 Aligned_cols=324 Identities=18% Similarity=0.260 Sum_probs=256.6
Q ss_pred CCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC
Q psy16562 93 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM 172 (445)
Q Consensus 93 ~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~ 172 (445)
.||.++.+|+|||++|||+|+|++||+|+|+|+|+|+ ++|||||||++++++ |||+| ||+|+||++|+|+|++.
T Consensus 33 ~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~tsiHwHG~~~~~~--~DG~~---~~~i~PG~~~~Y~f~~~ 106 (451)
T 2uxt_A 33 TPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLT-ENVSMTVAGLQVPGP--LMGGP---ARMMSPNADWAPVLPIR 106 (451)
T ss_dssp CSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSS-SCBCEEEETCCCCGG--GSCSG---GGCBCTTCEECCEEECC
T ss_pred CCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCC-CCccEEECCccCCCC--CCCCC---cCcCCCCCeEEEEEEcC
Confidence 3788999999999999999999999999999999998 899999999999874 99998 89999999999999998
Q ss_pred C-CcceEEeccc----chhhhcCceeEEEEeCCCCCC-CCCCccccCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCC
Q psy16562 173 P-SGTFFYHSHV----GLQKMDGLEGSMIIRTPKTAD-PHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPD 246 (445)
Q Consensus 173 ~-~GT~wYH~H~----~~q~~~Gl~G~lIV~~~~~~~-p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~ 246 (445)
+ +||||||||. +.|+++||+|+|||+++.+.. +....|+ ..|++|+|+||+++...+.... .....+..++
T Consensus 107 ~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~--~~e~~l~l~D~~~~~~~~~~~~-~~~~~~~~~d 183 (451)
T 2uxt_A 107 QNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYG--VDDFPVIIQDKRLDNFGTPEYN-EPGSGGFVGD 183 (451)
T ss_dssp SCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBT--TTEEEEEEEEEEECTTSCEECC-CCSSSCCCCS
T ss_pred CCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCC--CceEEEEEEeeecCCCCceecc-cccCCCCcCC
Confidence 5 9999999998 789999999999999874321 1112232 2389999999999876553321 1234567789
Q ss_pred eEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEe-cccceEEEccCCCcc-eeeEecEEEecCCc
Q psy16562 247 AILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTI-EKHQLQVIASDGTAV-EPLVVDSVTLFPGD 324 (445)
Q Consensus 247 ~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i-~gh~~~via~DG~~v-~P~~~~~~~I~pGe 324 (445)
.++|||+.. |.|+|++| +|||||+|++.. +.+.|+| +||.|+||++||+++ +|..++++.|+|||
T Consensus 184 ~~liNG~~~-----------p~~~v~~g-~~RlRliNa~~~-~~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~pge 250 (451)
T 2uxt_A 184 TLLVNGVQS-----------PYVEVSRG-WVRLRLLNASNS-RRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGE 250 (451)
T ss_dssp EEEETTEES-----------CEEEECSS-EEEEEEEECCSS-CCEEEEETTSCCEEEEECSSSEEEEEEEESSEEECTTC
T ss_pred EEEECCccc-----------ceEEecCC-EEEEEEEccCCc-eeEEEEECCCCeEEEEEeCCCccCCceEeceEEECcee
Confidence 999999976 48999999 999999999987 5899999 899999999999998 69999999999999
Q ss_pred eEEEEEecCCCCceEEEEEEec--CC-----------CceeeEEEEEcCCCCC--CCCCCCC----CCCCC---------
Q psy16562 325 RVDVIIHTNQSNNLYWMQAKTL--CD-----------SITAEAVLQYEGEKLT--YVSKRPK----SDSFP--------- 376 (445)
Q Consensus 325 R~dv~v~~~~~~G~y~~~~~~~--~~-----------~~~~~ail~y~~~~~~--~~~~~P~----~~~~~--------- 376 (445)
||||+|++++ +|+||+++... +. .....++++|...... ....+|. .....
T Consensus 251 R~dvlv~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~p~~L~~~~~~~~~~~~~~~~ 329 (451)
T 2uxt_A 251 RREILVDMSN-GDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTDSLPMRLLPTEIMAGSPIRSRDI 329 (451)
T ss_dssp EEEEEEECTT-CCCEEEEC----------------CCCCSCCEEEEEEECSCCC----CCCSCSSSSCCCCCCCSEEEEE
T ss_pred EEEEEEEeCC-CCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCccccCccccCCCCCCCCCCcceEEE
Confidence 9999999997 68999998764 11 1223578888754321 1111111 10000
Q ss_pred --CCCCCCCCCCCcc--ceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCC---CeEEeEEEe
Q psy16562 377 --RGKPKDNSPRVPM--HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE---PLVVDSVTL 443 (445)
Q Consensus 377 --~~~~~~~~~~~~~--~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~---p~~~Dtv~v 443 (445)
...-..|+..+.. ..+.++.|++++|+|+|. +.||| |||||+|||+++||.++. |.|+|||.|
T Consensus 330 ~l~~~~~iNg~~f~~~~~~~~~~~G~~~~~~l~N~--~~HP~--HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v 399 (451)
T 2uxt_A 330 SLGDDPGINGQLWDVNRIDVTAQQGTWERWTVRAD--EPQAF--HIEGVMFQIRNVNGAMPFPEDRGWKDTVWV 399 (451)
T ss_dssp EECSSSSBTTBCCCTTCCCEEEETTCEEEEEEEEE--EEEEE--EETTCEEEEEEETTBCCCGGGSSCBSEEEE
T ss_pred EEeeEEEECCEeCCCCCCcEEcCCCCEEEEEEECC--CCcCe--EECCceEEEEeeCCcCCCcccCCCccEEEE
Confidence 0011133333332 247899999999999997 67888 999999999999998764 789999987
No 10
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=3.9e-63 Score=512.78 Aligned_cols=340 Identities=21% Similarity=0.304 Sum_probs=268.0
Q ss_pred CceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCce
Q psy16562 55 PLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVT 134 (445)
Q Consensus 55 p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ts 134 (445)
+.+.+|+++++.. .+..||.++.+|+|||++|||+|+|++||+|+|+|+|+|+ ++|+
T Consensus 14 ~~~~~~~l~~~~~----------------------~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~ts 70 (439)
T 2xu9_A 14 GGLLSLKLSATPT----------------------PLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLP-EPTN 70 (439)
T ss_dssp TTEEEEEEEEEEE----------------------EEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSS-SCBC
T ss_pred CCeEEEEEEEEEE----------------------EEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCC-CCcc
Confidence 4567888888764 3456799999999999999999999999999999999998 8999
Q ss_pred EeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC--CCcceEEeccc----chhhhcCceeEEEEeCCCCCCCCCC
Q psy16562 135 LHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM--PSGTFFYHSHV----GLQKMDGLEGSMIIRTPKTADPHAE 208 (445)
Q Consensus 135 iHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~--~~GT~wYH~H~----~~q~~~Gl~G~lIV~~~~~~~p~~~ 208 (445)
|||||+++.. ++||++ ++|+||++|+|+|+++ ++||||||||. +.|+++||+|+|||+++.+..+
T Consensus 71 iHwHG~~~~~--~~DG~~----~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~--- 141 (439)
T 2xu9_A 71 LHWHGLPISP--KVDDPF----LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIP--- 141 (439)
T ss_dssp CEEETCCCCT--TTSCTT----CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGSH---
T ss_pred eEeCCCCCCc--cccCCc----ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccCc---
Confidence 9999999865 899986 3699999999999985 79999999996 6899999999999998643211
Q ss_pred ccccCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCc
Q psy16562 209 LYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLA 288 (445)
Q Consensus 209 ~~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~ 288 (445)
....+ .|++|+|+||+++..............+..++.++|||+.. |.++|++| +|||||+|++..
T Consensus 142 ~~~~~-~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~~-----------p~l~v~~g-~~RlRliN~~~~- 207 (439)
T 2xu9_A 142 ELREA-EEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGALR-----------PTLVAQKA-TLRLRLLNASNA- 207 (439)
T ss_dssp HHHTS-EEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEES-----------CEEECSSS-EEEEEEEECCSS-
T ss_pred cCCCC-CcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCccC-----------CcEEecCC-eEEEEEEecCCC-
Confidence 11222 38999999999886411000000011235678999999965 48999999 999999999987
Q ss_pred eeEEEEecccceEEEccCCCcc-eeeEecEEEecCCceEEEEEecCCCCceEEEEEEec--CC-----------------
Q psy16562 289 CPLIFTIEKHQLQVIASDGTAV-EPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CD----------------- 348 (445)
Q Consensus 289 ~~~~~~i~gh~~~via~DG~~v-~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~----------------- 348 (445)
+.+.|+|+||.|+||++||+++ +|..++++.|+||||||++|++++ +|+||++++.. +.
T Consensus 208 ~~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (439)
T 2xu9_A 208 RYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGP 286 (439)
T ss_dssp CCEEEEETTBCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCS
T ss_pred ceEEEEECCceEEEEecCCCCCCCceEeceEEECCceeEEEEEEcCC-CceEEEEecccccCCccccccccccccccCCC
Confidence 4799999999999999999998 699999999999999999999998 89999999754 21
Q ss_pred -CceeeEEEEEcCCCCCCCCCCCC----CCCCCC--------------CCC-CCCCCCCcc--ceeEeeCCcEEEEEEEc
Q psy16562 349 -SITAEAVLQYEGEKLTYVSKRPK----SDSFPR--------------GKP-KDNSPRVPM--HFFKVQRDKRYLMRIIG 406 (445)
Q Consensus 349 -~~~~~ail~y~~~~~~~~~~~P~----~~~~~~--------------~~~-~~~~~~~~~--~~~~v~~G~~~~~rliN 406 (445)
.....++|+|.+.... .++|. ...+.. +.. ..|+..+.. ..+.++.|++++|+|+|
T Consensus 287 ~~~~~~~~l~~~~~~~~--~~~p~~l~~~~~l~~~~~~r~~~l~~~~~g~~~~iNg~~~~~~~~~~~~~~g~~~~~~~~N 364 (439)
T 2xu9_A 287 SRPETLLYLIAPKNPKP--LPLPKALSPFPTLPAPVVTRRLVLTEDMMAARFFINGQVFDHRRVDLKGQAQTVEVWEVEN 364 (439)
T ss_dssp CCCEEEEEEEECSSCCC--CCCCSCCCCCCCCCCCSEEEEEEEEEEGGGTEEEETTBCCCTTCCCEEECTTCEEEEEEEE
T ss_pred CCcceeEEEEecCCCcc--ccCcccCCCcccCCCCCcceEEEEEeeccCceEeECCEECCCCCCceecCCCCEEEEEEEc
Confidence 1245688999875421 11111 001100 000 123333322 24789999999999999
Q ss_pred CCCCccceEEEEeCeeEEEEecCCccCC-CeEEeEEEecC
Q psy16562 407 GSCLACPLIFTIEKHQLQVIASDGTAVE-PLVVDSVTLFP 445 (445)
Q Consensus 407 ~s~~~Hp~~~hihgh~f~Vi~~dG~~~~-p~~~Dtv~v~p 445 (445)
.+.+.||| |||||+|+|++++|.+.. |.|||||.|.|
T Consensus 365 ~~~~~HP~--HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p 402 (439)
T 2xu9_A 365 QGDMDHPF--HLHVHPFQVLSVGGRPFPYRAWKDVVNLKA 402 (439)
T ss_dssp CSSSCEEE--EESSCCBEEEEETTEECSSCCCBSEEEECT
T ss_pred CCCCCCCc--eeCCCcEEEEeeCCCCCCCCCCeEEEEeCC
Confidence 99999998 999999999999998764 89999999975
No 11
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2.5e-62 Score=509.28 Aligned_cols=342 Identities=21% Similarity=0.308 Sum_probs=264.6
Q ss_pred CCCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCC
Q psy16562 53 AKPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDRE 132 (445)
Q Consensus 53 ~~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ 132 (445)
....+.+|+|+++... ....+|.++.+|+|||++|||+|||++||+|+|+|+|+|+ ++
T Consensus 46 ~~~~~~~~~L~~~~~~---------------------~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~-~~ 103 (481)
T 3zx1_A 46 KEKNIFHATLEIKENH---------------------IELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLK-EA 103 (481)
T ss_dssp CSTTEEEEEEEEEEEE---------------------ECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSS-SC
T ss_pred cCCCeEEEEEEEEEEE---------------------EEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCC-CC
Confidence 3578899999999753 2335788999999999999999999999999999999998 89
Q ss_pred ceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCC--CcceEEeccc----chhhhcCceeEEEEeCCCCCCCC
Q psy16562 133 VTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMP--SGTFFYHSHV----GLQKMDGLEGSMIIRTPKTADPH 206 (445)
Q Consensus 133 tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~--~GT~wYH~H~----~~q~~~Gl~G~lIV~~~~~~~p~ 206 (445)
|||||||+++.+ +|||+| ||+|+||++|+|+|++++ +||||||||. +.|+++||+|+|||+++++.
T Consensus 104 tsiHwHGl~~~~--~~DG~p---q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~--- 175 (481)
T 3zx1_A 104 TTIHWHGVPVPP--DQDGSP---HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDA--- 175 (481)
T ss_dssp BCCEEETCCCCG--GGSCCT---TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCT---
T ss_pred eeEEecCcccCC--ccCCCc---cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCcccc---
Confidence 999999999854 899996 899999999999999985 8999999995 68999999999999987432
Q ss_pred CCccccCCcceEEEEeeeeccCCCCccCCC-CCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccC
Q psy16562 207 AELYDFDLYSHVIIVTDWMHSMTDSKFPGN-TYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGS 285 (445)
Q Consensus 207 ~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~-~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~ 285 (445)
.++++ +..|+|+||+++..++..... .....+..++.++|||+.+ |.++|++|+ ||||+|++
T Consensus 176 --~~~~~--~~~l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~~-----------p~l~v~~g~--RlRliNa~ 238 (481)
T 3zx1_A 176 --LSHLK--EKDLMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFK-----------PKIKLATNE--RIRIYNAT 238 (481)
T ss_dssp --TTTSE--EEEEEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEES-----------CEEEEETTE--EEEEEECC
T ss_pred --ccCCC--ceeEEEEEEeccCCCccccccchhhccCCcCCEEEECCccC-----------ceEEecCCC--EEEEEecC
Confidence 23444 344999999998765522110 0112345789999999976 489999998 99999999
Q ss_pred CCceeEEEEecccceEEEccCCCcc-eeeEecEEEecCCceEEEEEecCCCCceEEEEEEecC-------CCceee--EE
Q psy16562 286 CLACPLIFTIEKHQLQVIASDGTAV-EPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTLC-------DSITAE--AV 355 (445)
Q Consensus 286 ~~~~~~~~~i~gh~~~via~DG~~v-~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~~-------~~~~~~--ai 355 (445)
.. +.+.|+|++|.|+||++||.++ +|..++.+.|+|||||||+|++++ +++|.+.+.... ...... ..
T Consensus 239 ~~-~~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~~~~~~~ 316 (481)
T 3zx1_A 239 AA-RYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDAPK-DGNFKLESAYYDRDKMMVKEEPNTLFLAN 316 (481)
T ss_dssp SS-CCEEEEETTCEEEEEEETTEEEEEEEEESSEEECTTCEEEEEEECSS-CEEEEEEECCCCCCCSSCCCCCCCEEEEE
T ss_pred CC-eEEEEEECCCceEEEEcCCCccCCceEeCeEEECCccEEEEEEEcCC-CcEEEEEEecccccCccccCCCCceeEEE
Confidence 87 5899999999999999998776 599999999999999999999987 688888774431 011222 33
Q ss_pred EEEcCCCCCCCC---CCCCCC--------CCCCCC---------------------CCCCCCCCc--cceeEeeCCcEEE
Q psy16562 356 LQYEGEKLTYVS---KRPKSD--------SFPRGK---------------------PKDNSPRVP--MHFFKVQRDKRYL 401 (445)
Q Consensus 356 l~y~~~~~~~~~---~~P~~~--------~~~~~~---------------------~~~~~~~~~--~~~~~v~~G~~~~ 401 (445)
+++.+.+...+. +.|... .+.... -..|+..+. ...+.++.|++++
T Consensus 317 ~~~~~~~~~lP~~l~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~~~~~~~~~G~~v~ 396 (481)
T 3zx1_A 317 INLKKENVELPKNLKIFKPSEEPKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDLKRIDLSSKLGVVED 396 (481)
T ss_dssp EEEECCCCCCCSCSCCCCCCCCCCEEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCTTCCCEEEETTCCEE
T ss_pred EecCCCCccCCccccCCCCCCCCCcEEEEEEeccchhcccccccccccccccccceeEECCEeCCCCCceEEeCCCCEEE
Confidence 334332111111 111110 000000 012333332 1248899999999
Q ss_pred EEEEcCCCCccceEEEEeCeeEEEEec--CCccCC---CeEEeEEEecC
Q psy16562 402 MRIIGGSCLACPLIFTIEKHQLQVIAS--DGTAVE---PLVVDSVTLFP 445 (445)
Q Consensus 402 ~rliN~s~~~Hp~~~hihgh~f~Vi~~--dG~~~~---p~~~Dtv~v~p 445 (445)
|+|+|.+.+.||| |||||+|||+++ +|..+. +.|+|||.|.|
T Consensus 397 w~l~N~~~~~Hp~--HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~P 443 (481)
T 3zx1_A 397 WIVINKSHMDHPF--HIHGTQFELISSKLNGKVQKAEFRALRDTINVRP 443 (481)
T ss_dssp EEEEECSSSCEEE--EETTCCEEEEEEEETTEEEECSSCCEESEEEECT
T ss_pred EEEEcCCCCceeE--EEeccEEEEEEecccCCCCCcccCcccceEEECC
Confidence 9999999999998 999999999999 998763 68999999986
No 12
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=2.4e-62 Score=509.46 Aligned_cols=342 Identities=22% Similarity=0.296 Sum_probs=260.7
Q ss_pred eEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEe
Q psy16562 57 VCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLH 136 (445)
Q Consensus 57 ~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiH 136 (445)
...|+|+++... +..+|.++.+|+|||++|||+|++++||+|+|+|+|+|+ ++|+||
T Consensus 17 ~~~~~l~~~~~~----------------------~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~-~~tsiH 73 (488)
T 3od3_A 17 RNRIQLTIGAGQ----------------------STFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLT-EETTLH 73 (488)
T ss_dssp TSEEEEEEEEEE----------------------EEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSS-SCBCCE
T ss_pred CeeEEEEEEEEE----------------------EccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCc-CceeEe
Confidence 457999998653 223899999999999999999999999999999999999 899999
Q ss_pred eCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCC-CcceEEeccc----chhhhcCceeEEEEeCCCCCC-CCCCcc
Q psy16562 137 WHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMP-SGTFFYHSHV----GLQKMDGLEGSMIIRTPKTAD-PHAELY 210 (445)
Q Consensus 137 wHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~-~GT~wYH~H~----~~q~~~Gl~G~lIV~~~~~~~-p~~~~~ 210 (445)
|||+++.+ ++||+| ||+|+||++|+|+|++.+ +||||||||. +.|+++||+|+|||+++.+.. +....|
T Consensus 74 wHG~~~~~--~~DG~p---~~~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y 148 (488)
T 3od3_A 74 WHGLEVPG--EVDGGP---QGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQW 148 (488)
T ss_dssp EETCCCCH--HHHCCT---TCCBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCB
T ss_pred ecccccCc--ccCCCC---cCcCcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccC
Confidence 99999976 799997 899999999999999986 7999999996 689999999999999875422 122335
Q ss_pred ccCCcceEEEEeeeeccCCCCccCCCC--CCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCc
Q psy16562 211 DFDLYSHVIIVTDWMHSMTDSKFPGNT--YNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLA 288 (445)
Q Consensus 211 d~d~~e~~l~l~D~~~~~~~~~~~~~~--~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~ 288 (445)
+.| |++|+|+||+++..++...... ....+..++.++|||+.++ .+.+ +|++|||||||++..
T Consensus 149 ~~~--d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~~p-----------~~~v-~g~~~RlRliNas~~- 213 (488)
T 3od3_A 149 GID--DVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYP-----------QHAA-PRGWLRLRLLNGCNA- 213 (488)
T ss_dssp TTT--EEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBSSC-----------EEEE-EEEEEEEEEEECCSS-
T ss_pred Ccc--ceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCcCc-----------cEec-CCCEEEEEEEccCCC-
Confidence 555 8999999999976654222110 0123467899999999764 5655 578999999999986
Q ss_pred eeEEEEe-cccceEEEccCCCcc-eeeEecEEEecCCceEEEEEecCCCCceEEEEEEec---C----CCceeeEEEEEc
Q psy16562 289 CPLIFTI-EKHQLQVIASDGTAV-EPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL---C----DSITAEAVLQYE 359 (445)
Q Consensus 289 ~~~~~~i-~gh~~~via~DG~~v-~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~---~----~~~~~~ail~y~ 359 (445)
+.+.|+| ++|.|+||++||+++ +|..++++.|+|||||||+|++++ .+.|++.+... . .......+++..
T Consensus 214 ~~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~ 292 (488)
T 3od3_A 214 RSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVND-NKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQ 292 (488)
T ss_dssp CCEEEEETTCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECT-TCCEEEEECCCSSTTTTSTTTTSCEEEEEEE
T ss_pred ceeeeeecCCCeEEEEEeCCCcccCccEeceEEECCCCEEEEEEEeCC-CceEEEEEeccCCCCcccccccCccceeEec
Confidence 5899999 699999999999987 699999999999999999999997 67898877543 1 001111233322
Q ss_pred C-----CCCCCC-----CCCCCCCC-------C-C----------------------------------CC-C-------
Q psy16562 360 G-----EKLTYV-----SKRPKSDS-------F-P----------------------------------RG-K------- 379 (445)
Q Consensus 360 ~-----~~~~~~-----~~~P~~~~-------~-~----------------------------------~~-~------- 379 (445)
. ....|. +.+|+... + . .+ .
T Consensus 293 ~~~~~~~~~~P~~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 372 (488)
T 3od3_A 293 PIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGG 372 (488)
T ss_dssp EEEEECCCCCCSCCCCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCG
T ss_pred ccccCCCCCCCcccccCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccc
Confidence 1 111110 11122110 0 0 00 0
Q ss_pred --C-----CCCCCCCcc--ceeEeeCCcEEEEEEEcCC-CCccceEEEEeCeeEEEEecCCccCC---CeEEeEEEec
Q psy16562 380 --P-----KDNSPRVPM--HFFKVQRDKRYLMRIIGGS-CLACPLIFTIEKHQLQVIASDGTAVE---PLVVDSVTLF 444 (445)
Q Consensus 380 --~-----~~~~~~~~~--~~~~v~~G~~~~~rliN~s-~~~Hp~~~hihgh~f~Vi~~dG~~~~---p~~~Dtv~v~ 444 (445)
. ..|+..++. ..++++.|++++|+|+|.+ .+.||| |||||+|+|+++||.++. +.|+|||.|.
T Consensus 373 ~~~~~~~~~ING~~~~~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~--HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~ 448 (488)
T 3od3_A 373 KFDFHHANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPF--HIHGTQFRILSENGKPPAAHRAGWKDTVKVE 448 (488)
T ss_dssp GGCGGGCEEETTBCCCTTCCSEECCBSSCEEEEEECTTCCCCEEE--EETTCCBEEEEBTTBCCCGGGSSSBSEEEES
T ss_pred cccccceeeECCeeCCCCCCceEcCCCCEEEEEEEeCCCCCCccE--EEcCceEEEeccCCCccccccCCceeEEEeC
Confidence 0 123333331 2478999999999999998 678887 999999999999999876 4699999985
No 13
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=7e-61 Score=504.75 Aligned_cols=334 Identities=21% Similarity=0.282 Sum_probs=252.7
Q ss_pred ecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCC---------------------CCceEeeCCcccCCCCCCC
Q psy16562 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID---------------------REVTLHWHGVYQKVTPWMD 149 (445)
Q Consensus 91 ~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~---------------------~~tsiHwHG~~~~~~~~~D 149 (445)
+.+++.++.+|+|||++|||+|+|++||+|+|+|+|+|+. ++|||||||+++.. +||
T Consensus 39 ~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsiHwHGl~~~~--~~D 116 (513)
T 2wsd_A 39 LHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPD--DSD 116 (513)
T ss_dssp SSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCEEEETCCCCG--GGS
T ss_pred eCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEEEcCCCcCCC--ccC
Confidence 4456678999999999999999999999999999999973 28999999999974 799
Q ss_pred CCCc--ccccCCCCCCce---EEEEecC-CCcceEEecccc----hhhhcCceeEEEEeCCCCCCCCCCccccCCcceEE
Q psy16562 150 GVPM--VTQCPIPSSTTF---RYKFPAM-PSGTFFYHSHVG----LQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVI 219 (445)
Q Consensus 150 Gvp~--~tq~pI~pG~~~---~Y~f~~~-~~GT~wYH~H~~----~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l 219 (445)
|+|+ ++||+|+||++| +|+|++. ++||||||||.. .|+++||+|+|||+++.+.......+++ |++|
T Consensus 117 G~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~d~---d~~l 193 (513)
T 2wsd_A 117 GYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRLKLPSDEY---DVPL 193 (513)
T ss_dssp CCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGGGCCCCGGG---EEEE
T ss_pred CCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccccccCCCCCC---cEEE
Confidence 9996 799999999555 9999986 799999999984 5899999999999987532211112333 7999
Q ss_pred EEeeeeccCCCCccCCCC-----------CCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCc
Q psy16562 220 IVTDWMHSMTDSKFPGNT-----------YNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLA 288 (445)
Q Consensus 220 ~l~D~~~~~~~~~~~~~~-----------~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~ 288 (445)
+|+||+++...+.+.... ....+..++.+||||+.++ .++|+++ +|||||||++..
T Consensus 194 ~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~p-----------~~~v~~~-~~RlRliNa~~~- 260 (513)
T 2wsd_A 194 LITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVWP-----------YLEVEPR-KYRFRVINASNT- 260 (513)
T ss_dssp EEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEESC-----------EEECCSS-EEEEEEEECCSS-
T ss_pred EEEeeecCCCCceecccccccccccccccccccccccceEEECCcccc-----------eEEecCC-EEEEEEEccCCc-
Confidence 999999887654322210 0123457899999999864 7899875 899999999987
Q ss_pred eeEEEEeccc-ceEEEccCCCcc-eeeEecEEEecCCceEEEEEecCCCCceEEEEEEec--CCC----ceeeEEEEEcC
Q psy16562 289 CPLIFTIEKH-QLQVIASDGTAV-EPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CDS----ITAEAVLQYEG 360 (445)
Q Consensus 289 ~~~~~~i~gh-~~~via~DG~~v-~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~~----~~~~ail~y~~ 360 (445)
+.+.|+|++| .|+||++||+++ +|..++.+.|+|||||||+|++++.+|. |+..... |.. ....++++|..
T Consensus 261 ~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~-~~~l~~~~~~~~~~~~~~~~~il~~~~ 339 (513)
T 2wsd_A 261 RTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGE-SIILANSAGCGGDVNPETDANIMQFRV 339 (513)
T ss_dssp CCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTC-EEEEEECCCSSSSCCTTTTTEEEEEEC
T ss_pred ceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCc-EEEEEecccccccCCCCCCcceEEEEe
Confidence 5899999999 999999999998 6999999999999999999999986676 3333332 311 23457888875
Q ss_pred CCC--C-CCCCCCCC----CCCC----------------CCC----CCCCCCCCc-cceeEeeCCcEEEEEEEcCCCCcc
Q psy16562 361 EKL--T-YVSKRPKS----DSFP----------------RGK----PKDNSPRVP-MHFFKVQRDKRYLMRIIGGSCLAC 412 (445)
Q Consensus 361 ~~~--~-~~~~~P~~----~~~~----------------~~~----~~~~~~~~~-~~~~~v~~G~~~~~rliN~s~~~H 412 (445)
... . ....+|.. ..++ ... -..|+..+. ...+.++.|++++|.|+|.+.+.|
T Consensus 340 ~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~iNg~~~~~~~~~~~~~g~~~~w~l~N~~~~~H 419 (513)
T 2wsd_A 340 TKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGTQDEYGRPVLLLNNKRWHDPVTETPKVGTTEIWSIINPTRGTH 419 (513)
T ss_dssp CSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEEECTTSCEEEEETTBCTTSCCCBCCBTTCEEEEEEEECSSSCE
T ss_pred ccCcccCccCCCCccccCCCCcccCCCcceEEEEEEeecCCCCCceEeECCccCCCcccEecCCCCEEEEEEEcCCCCCc
Confidence 431 1 11111110 0000 000 012232222 124678999999999999998999
Q ss_pred ceEEEEeCeeEEEEecCCc---------------cC------CCeEEeEEEecC
Q psy16562 413 PLIFTIEKHQLQVIASDGT---------------AV------EPLVVDSVTLFP 445 (445)
Q Consensus 413 p~~~hihgh~f~Vi~~dG~---------------~~------~p~~~Dtv~v~p 445 (445)
|| |||||+|||+++++. +. .+.|+|||.|.|
T Consensus 420 P~--HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~p 471 (513)
T 2wsd_A 420 PI--HLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHA 471 (513)
T ss_dssp EE--EESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECT
T ss_pred CE--eEeCceEEEEEecCcccccccccccccccCCCCCCCccccCcccEEEeCC
Confidence 98 999999999998752 11 246999999976
No 14
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=1.8e-60 Score=502.55 Aligned_cols=345 Identities=19% Similarity=0.245 Sum_probs=263.0
Q ss_pred ceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceE
Q psy16562 56 LVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTL 135 (445)
Q Consensus 56 ~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsi 135 (445)
.+.+|+|+++... ..+.+||.++.+|+|||++|||+|+|++||+|+|+|+|+|+ ++|||
T Consensus 35 ~~~~~~l~~~~~~--------------------~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~-~~tsi 93 (534)
T 3abg_A 35 EIWYYEVEIKPFT--------------------HQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAE-APNSV 93 (534)
T ss_dssp CCEEEEEEEECCE--------------------ECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSS-SCBCE
T ss_pred ceEEEEEEEEEEE--------------------EEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCC-CCceE
Confidence 3578999998542 34677888899999999999999999999999999999998 89999
Q ss_pred eeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCC-CcceEEecccc----hhhhcCceeEEEEeCCCCCCCC-CCc
Q psy16562 136 HWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMP-SGTFFYHSHVG----LQKMDGLEGSMIIRTPKTADPH-AEL 209 (445)
Q Consensus 136 HwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~-~GT~wYH~H~~----~q~~~Gl~G~lIV~~~~~~~p~-~~~ 209 (445)
||||++++. +|||++ ||+|+||++|+|+|++.+ +||||||||.. .|+++||+|+|||+++.+.... ...
T Consensus 94 HwHGl~~~~--~~DG~~---~~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~ 168 (534)
T 3abg_A 94 HLHGSFSRA--AFDGWA---EDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSG 168 (534)
T ss_dssp EEETCCCCT--TTTTCS---SSCBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCC
T ss_pred EECCCcCCC--CCCCCC---CCCCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCcc
Confidence 999999876 799974 799999999999999985 78999999984 6889999999999988543211 111
Q ss_pred c-ccCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCc
Q psy16562 210 Y-DFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLA 288 (445)
Q Consensus 210 ~-d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~ 288 (445)
| ++ |++|+|+||+++..++.+.. .....+..++.++|||+.++ .++|++ ++|||||||++..
T Consensus 169 ~~~~---d~~l~l~d~~~~~~g~~~~~-~~~~~~~~gd~~lvNG~~~p-----------~~~v~~-~~~RlRliNa~~~- 231 (534)
T 3abg_A 169 YGEF---DIPMILTSKQYTANGNLVTT-NGELNSFWGDVIHVNGQPWP-----------FKNVEP-RKYRFRFLDAAVS- 231 (534)
T ss_dssp HHHH---SCCEEEEEECBCSSSCBCCC-TTCSSCCCCSEEEETTEESC-----------BCBCCS-SEEEEEEEECCSS-
T ss_pred CCcc---eEEEEEeeeeecCCCceecc-CCCCccccCceeccCCccCc-----------eEEecC-cEEEEEEEecCCc-
Confidence 2 33 58999999999866553322 11234456899999999764 688887 5999999999987
Q ss_pred eeEEEEecc-------cceEEEccCCCcc-eeeEecEEEecCCceEEEEEecCCCCc-eEEEEEEec---CC-----Cce
Q psy16562 289 CPLIFTIEK-------HQLQVIASDGTAV-EPLVVDSVTLFPGDRVDVIIHTNQSNN-LYWMQAKTL---CD-----SIT 351 (445)
Q Consensus 289 ~~~~~~i~g-------h~~~via~DG~~v-~P~~~~~~~I~pGeR~dv~v~~~~~~G-~y~~~~~~~---~~-----~~~ 351 (445)
+.+.|+|++ |.|+||++||+++ +|..++.+.|+|||||||+|++++.+| +||+++... |. ...
T Consensus 232 ~~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~ 311 (534)
T 3abg_A 232 RSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDN 311 (534)
T ss_dssp CCEEEEECCSSSTTCCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTT
T ss_pred ceEEEEEecccCcCCCccEEEEEeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCC
Confidence 478999987 9999999999854 699999999999999999999998667 699987532 21 123
Q ss_pred eeEEEEEcCCCCC---CCCCCCC---------CC-C----C-CC--CCC-CCCCCCCcc----ceeEeeCCcEEEEEEEc
Q psy16562 352 AEAVLQYEGEKLT---YVSKRPK---------SD-S----F-PR--GKP-KDNSPRVPM----HFFKVQRDKRYLMRIIG 406 (445)
Q Consensus 352 ~~ail~y~~~~~~---~~~~~P~---------~~-~----~-~~--~~~-~~~~~~~~~----~~~~v~~G~~~~~rliN 406 (445)
..++++|...... ....+|. .. . + .. ... ..|+..+.. ..+.++.|++++|.|.|
T Consensus 312 ~~~il~~~~~~~~~~~~~~~~P~~L~~~~~p~~~~~~~~~~~~~~~~~~w~iNG~~f~~~~~p~l~~v~~G~~~~w~i~N 391 (534)
T 3abg_A 312 TDKVMRFVVADDTTQPDTSVVPANLRDVPFPSPTTNTPRQFRFGRTGPTWTINGVAFADVQNRLLANVPVGTVERWELIN 391 (534)
T ss_dssp TSEEEEEECCCCSSCSCCCCCCCCCCCCSCCCCCCCCCEEEECSCCCSTTCCCCBTTBCTTSCCCCEECTTCEEEEEEEE
T ss_pred cceeEEEecCCCCcCCCCCCCccccccCCCCCCccccceEEEEeccCceeEECCcccCCCCCcceeeccCCCEEEEEEEc
Confidence 4588888644321 1111111 00 0 0 00 001 123333321 13678999999999999
Q ss_pred CCC-CccceEEEEeCeeEEEEec-CCc---cCCC---eEEeEEEecC
Q psy16562 407 GSC-LACPLIFTIEKHQLQVIAS-DGT---AVEP---LVVDSVTLFP 445 (445)
Q Consensus 407 ~s~-~~Hp~~~hihgh~f~Vi~~-dG~---~~~p---~~~Dtv~v~p 445 (445)
.+. +.||| |||||+|+|+++ +|. ...+ .|+|||.|.|
T Consensus 392 ~~~~~~HP~--HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~p 436 (534)
T 3abg_A 392 AGNGWTHPI--HIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGR 436 (534)
T ss_dssp CSSSCCCCE--EESSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCS
T ss_pred CCCCCCcCE--EECCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCC
Confidence 874 58998 999999999998 563 2222 6899999875
No 15
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=1.3e-61 Score=501.80 Aligned_cols=317 Identities=20% Similarity=0.321 Sum_probs=250.6
Q ss_pred EEECCC-CCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC-CCcceE
Q psy16562 101 LSINRQ-LPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM-PSGTFF 178 (445)
Q Consensus 101 ~~~Ng~-~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~-~~GT~w 178 (445)
|+|||+ +|||+|+|++||+|+|+|+|+|+ ++|||||||++++. +|||+|+ |+|+||++|+|+|+++ ++||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~-~~tsiHwHG~~~~~--~~DG~~~---~~i~PG~~~~Y~f~~~~~~GT~w 101 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLT-EPTIVHWHGFDVNW--HNDAHPS---FAITPGESYNYSFDVVNRAGTYL 101 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSS-SCBCEEEETCCCCH--HHHTCGG---GCBCTTCEEEEEEECCSCSEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCC-CceeEEeCCccCCC--ccCCCCC---ccCCCCCEEEEEEEcCCCCCceE
Confidence 999999 99999999999999999999998 89999999999964 7999998 9999999999999999 799999
Q ss_pred Eecc----cchhhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEeeeeccCCCCccCCC--CCCCCCCCCCeEEEcc
Q psy16562 179 YHSH----VGLQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGN--TYNDTRIKPDAILING 252 (445)
Q Consensus 179 YH~H----~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~--~~~~~~~~~~~~lING 252 (445)
|||| ++.|+++||+|+|||+++++. ...+||. .|++|+|+||+++. .+..... .....+..++.++|||
T Consensus 102 YH~H~~~~~~~q~~~Gl~G~liV~~~~~~--~~l~~d~--~e~~l~l~D~~~~~-~~~~~~~~~~~~~~~~~~~~~liNG 176 (448)
T 3aw5_A 102 YHPHPHGLTAKQFYMGQLGLVIVEDSGSD--LGFKYGV--NDLPLVISDRRFIG-GAPVYNPTPMEMIAGFLGNAVLVNG 176 (448)
T ss_dssp EEECCTTTHHHHHHTTCCEEEEEECTTTT--TTCCBTT--TEEEEEEEEEEEET-TEEECCCCHHHHHHCCCCSEEEETT
T ss_pred eccCCCCchHHHHhccceEEEEEeCCccc--cCCCCCC--ceEEEEEEeeccCC-CcccccccccccccCccccEEEECC
Confidence 9999 789999999999999987543 1112443 38999999999987 5422200 0012345789999999
Q ss_pred ccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEe--cc---cceEEEccCCCcce-eeEecEEEecCCceE
Q psy16562 253 QNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTI--EK---HQLQVIASDGTAVE-PLVVDSVTLFPGDRV 326 (445)
Q Consensus 253 ~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i--~g---h~~~via~DG~~v~-P~~~~~~~I~pGeR~ 326 (445)
+.. +.++|++| +|||||+|++.. +.+.|+| ++ |.|+||++||++++ |..++.+.|+|||||
T Consensus 177 ~~~-----------p~~~v~~g-~~RlRliNa~~~-~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~ 243 (448)
T 3aw5_A 177 VKD-----------AVFKLSGG-SYRLRLVNGSNA-RLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERA 243 (448)
T ss_dssp EET-----------CEEEEEEE-EEEEEEEECSSS-CCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEE
T ss_pred ccc-----------ceEEECCC-eEEEEEEcCCCc-ceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceE
Confidence 976 48999999 999999999987 5899999 99 99999999999999 999999999999999
Q ss_pred EEEEecCCCCceEEEEEEec--C-C-------------CceeeEEEEEcCCCCCC-CCCCCCCC--CCCC----------
Q psy16562 327 DVIIHTNQSNNLYWMQAKTL--C-D-------------SITAEAVLQYEGEKLTY-VSKRPKSD--SFPR---------- 377 (445)
Q Consensus 327 dv~v~~~~~~G~y~~~~~~~--~-~-------------~~~~~ail~y~~~~~~~-~~~~P~~~--~~~~---------- 377 (445)
||+|++++ +.||+++... | . .....++++|.+....+ +..++... .+..
T Consensus 244 dvlv~~~~--~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~L~~lp~~~~~~~~~~~~~l~~ 321 (448)
T 3aw5_A 244 EVVVELGE--GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEPPKPTRTRRFALSL 321 (448)
T ss_dssp EEEEEECS--EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCCCCSCCCCCCCCCSEEEEEEEEE
T ss_pred EEEEECCC--CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCccccCCCCCCCCCCCceEEEEEeC
Confidence 99999984 7899998754 1 1 12345778886543211 11111100 0000
Q ss_pred -CCCC-CCCCCCc--cceeE-eeCCcEEEEEEEcCC-CCccceEEEEeCeeEEEEecCCccC------------C---Ce
Q psy16562 378 -GKPK-DNSPRVP--MHFFK-VQRDKRYLMRIIGGS-CLACPLIFTIEKHQLQVIASDGTAV------------E---PL 436 (445)
Q Consensus 378 -~~~~-~~~~~~~--~~~~~-v~~G~~~~~rliN~s-~~~Hp~~~hihgh~f~Vi~~dG~~~------------~---p~ 436 (445)
...+ .|+..+. ...+. ++.|++++|+|.|.+ .+.||| |||||+|||++++|... . |.
T Consensus 322 ~~~~~~iNg~~~~~~~p~~~~~~~g~~v~~~i~N~~~~~~HP~--HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~ 399 (448)
T 3aw5_A 322 SGMQWTINGMFWNASNPLFEHVSVEGVELWEIVNDKASMPHPM--HLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLG 399 (448)
T ss_dssp ETTEEEETTBCCCTTCTTCCCEEECEEEEEEEEECSSSCCEEE--EESSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGS
T ss_pred CCceeeECCCcCCCCCCceeccCCCCeEEEEEEcCCCCCCcCE--EECCceEEEEEecCCCcccccccccccCCCccccC
Confidence 0000 2222221 11356 899999999999998 889998 99999999999998764 2 36
Q ss_pred EEeEEEecC
Q psy16562 437 VVDSVTLFP 445 (445)
Q Consensus 437 ~~Dtv~v~p 445 (445)
|||||.|.|
T Consensus 400 ~rDTv~v~p 408 (448)
T 3aw5_A 400 LKDTVLIWP 408 (448)
T ss_dssp CBSEEEECT
T ss_pred CccEEEeCC
Confidence 999999976
No 16
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=1.1e-59 Score=506.43 Aligned_cols=319 Identities=16% Similarity=0.197 Sum_probs=233.6
Q ss_pred eecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCC---------------------------------------
Q psy16562 90 CVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID--------------------------------------- 130 (445)
Q Consensus 90 ~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~--------------------------------------- 130 (445)
.+.+|+..+.+|+|||++|||+|+|++||+|+|+|+|+|+.
T Consensus 45 ~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (612)
T 3gyr_A 45 RLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVAAL 124 (612)
T ss_dssp CSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSCSCTTCCCCHHHHTC
T ss_pred eecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCccccccccccccccccccccC
Confidence 45667778899999999999999999999999999999962
Q ss_pred -CCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC-CCcceEEeccc----chhhhcCceeEEEEeCCCCCC
Q psy16562 131 -REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM-PSGTFFYHSHV----GLQKMDGLEGSMIIRTPKTAD 204 (445)
Q Consensus 131 -~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~-~~GT~wYH~H~----~~q~~~Gl~G~lIV~~~~~~~ 204 (445)
+.|+|||||+++.+ +|||+| ||+|+||++|+|+|++. ++||||||||. +.|+++||+|+|||+++.+..
T Consensus 125 ~~~ttiHwHGl~~~~--~~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl~G~liI~d~~~~~ 199 (612)
T 3gyr_A 125 PAWSVTHLHGAQTGG--GNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDEEDA 199 (612)
T ss_dssp CCCBCEEEETCCCCT--TTSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTTCEEEEEEECHHHHT
T ss_pred CCCceEEcCCCccCC--cccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhccceeEEEEcCccccc
Confidence 24789999999854 799975 99999999999999998 57999999996 789999999999999875433
Q ss_pred CCCCccccCCcceEEEEeeeeccCCCCccCC-----------------CCCCCCCCCCCeEEEccccCCCCCCCCCcccc
Q psy16562 205 PHAELYDFDLYSHVIIVTDWMHSMTDSKFPG-----------------NTYNDTRIKPDAILINGQNQNPKDNSPRVPMH 267 (445)
Q Consensus 205 p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~-----------------~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~ 267 (445)
.....++ .|++|+|+||+++...+.... ......+..++.++|||+.++
T Consensus 200 ~~~p~~d---~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~p----------- 265 (612)
T 3gyr_A 200 LGLPSGD---REIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIWP----------- 265 (612)
T ss_dssp TTCCCGG---GEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEESC-----------
T ss_pred cCCCCCC---ccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCccc-----------
Confidence 2222233 379999999998754331110 001123456799999999764
Q ss_pred eEEEecCcEEEEEEEccCCCceeEEEEeccc-------ceEEEccCCCcce-eeEe------cEEEecCCceEEEEEecC
Q psy16562 268 FFKVQRDKRYLMRIIGGSCLACPLIFTIEKH-------QLQVIASDGTAVE-PLVV------DSVTLFPGDRVDVIIHTN 333 (445)
Q Consensus 268 ~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh-------~~~via~DG~~v~-P~~~------~~~~I~pGeR~dv~v~~~ 333 (445)
.+.++. ++|||||||++.. +.+.|+|++| .|+|||+||++++ |+.+ +.+.|+|||||||+|+++
T Consensus 266 ~~~v~~-~~yRlRliNas~~-~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGeRydVlV~~~ 343 (612)
T 3gyr_A 266 YADVDD-GWYRLRLVNASNA-RIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFR 343 (612)
T ss_dssp EEEEES-SEEEEEEEECCSS-CCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECT
T ss_pred eEeccC-cEEEEEEEeccCC-cceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccceEEEEEEECC
Confidence 778874 6899999999987 5899999998 4999999999985 6655 479999999999999999
Q ss_pred CCCceEEEEEEec---C-------CCceeeEEEEEcCCCC--CCCCCCCCCC---------CCC-----------CCCCC
Q psy16562 334 QSNNLYWMQAKTL---C-------DSITAEAVLQYEGEKL--TYVSKRPKSD---------SFP-----------RGKPK 381 (445)
Q Consensus 334 ~~~G~y~~~~~~~---~-------~~~~~~ail~y~~~~~--~~~~~~P~~~---------~~~-----------~~~~~ 381 (445)
+.+|.+++..... + .......++.+..... .....+|... .+. .....
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (612)
T 3gyr_A 344 ALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGHRLIVLTPPGTKGS 423 (612)
T ss_dssp TCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEEEEEEEECTTCTTT
T ss_pred CCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccccccccccccccccccccccccccccccccc
Confidence 9777665443322 1 2233345666553221 1111111100 000 00000
Q ss_pred ------------------------------CCC---------CCC-ccceeEeeCCcEEEEEEEcCCCCccceEEEEeCe
Q psy16562 382 ------------------------------DNS---------PRV-PMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKH 421 (445)
Q Consensus 382 ------------------------------~~~---------~~~-~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh 421 (445)
.+. ..+ ....+.++.|++++|.|+|.+.+.||| |||||
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~g~~~~w~i~N~~~~~HP~--HLHG~ 501 (612)
T 3gyr_A 424 GGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTFNDGLGFTIGEGTHEQWTFLNLSPILHPM--HIHLA 501 (612)
T ss_dssp TTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECSTTSCCCEEEETTCEEEEEEEECSSSCEEE--EESSC
T ss_pred cccccccccccccccccccccccceeeeccCCCccccccccCccCCCCcceEeCCCCEEEEEEEcCCCCCcCE--eECCC
Confidence 000 000 011477899999999999999999998 99999
Q ss_pred eEEEEecCCc
Q psy16562 422 QLQVIASDGT 431 (445)
Q Consensus 422 ~f~Vi~~dG~ 431 (445)
+||||+++|.
T Consensus 502 ~F~Vl~~~g~ 511 (612)
T 3gyr_A 502 DFQVLGRDAY 511 (612)
T ss_dssp EEEEEEEEEE
T ss_pred cEEEEeecCC
Confidence 9999998764
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=1.4e-58 Score=492.50 Aligned_cols=333 Identities=16% Similarity=0.203 Sum_probs=247.6
Q ss_pred CceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCC---
Q psy16562 55 PLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDR--- 131 (445)
Q Consensus 55 p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~--- 131 (445)
+.+.+|++++...+ ..+.+++.++.+|+|||++|||||+|++||+|+|+|+|+|+..
T Consensus 30 ~~~~~~~l~~~~~~--------------------~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~ 89 (612)
T 2g23_A 30 EVTRETEIALRPTW--------------------VRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEY 89 (612)
T ss_dssp CTTBCEEEEEEEEE--------------------ECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCC
T ss_pred CCeEEEEEEEEEEE--------------------EEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccc
Confidence 34678999888753 2344566789999999999999999999999999999999832
Q ss_pred -------------------------------------CceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC-C
Q psy16562 132 -------------------------------------EVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM-P 173 (445)
Q Consensus 132 -------------------------------------~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~-~ 173 (445)
+|+|||||+++.. .+||+| ||+|+||++|+|+|++. +
T Consensus 90 ~~~~~~~p~~~~g~p~~~~~p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~--~~DG~p---~~~i~PG~s~~Y~f~~~~~ 164 (612)
T 2g23_A 90 PVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVAALPAWSVTHLHGAQTGG--GNDGWA---DNAVGFGDAQLSEYPNDHQ 164 (612)
T ss_dssp SEEEEEECCCSTTSCCGGGSCSCTTCCCCHHHHTCCCCBCEEEETCCCCT--TTSCCG---GGCBCTTCEEEEEECCCSC
T ss_pred cccccccccccCCCcccccccccccccccccccccCCceEEEcCCCCCCC--ccCCCC---cCCCCCCCeEEEEEEecCC
Confidence 2899999999976 599985 89999999999999997 7
Q ss_pred CcceEEecccc----hhhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEeeeeccCCCC-ccC------C----CCC
Q psy16562 174 SGTFFYHSHVG----LQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDS-KFP------G----NTY 238 (445)
Q Consensus 174 ~GT~wYH~H~~----~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D~~~~~~~~-~~~------~----~~~ 238 (445)
+||||||||.. .|+++||+|+|||+++++.......+|. |++|+|+||+++...+ .+. . ...
T Consensus 165 aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~d~---d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~ 241 (612)
T 2g23_A 165 ATQWWYHDHAMNITRWNVMAGLYGTYLVRDDEEDALGLPSGDR---EIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSN 241 (612)
T ss_dssp SCEEEEEECCTTTHHHHTTTTCEEEEEEECHHHHTTTCCCGGG---EEEEEEEEECEEECTTSCEEEEEEEEEEEEESSC
T ss_pred CceEEEecccCCcchhhhhccceeEEEEcCcccccccCCCCcc---eEEEEEEEEeccCCcccccccccccccccccccc
Confidence 99999999984 5999999999999987532211122443 6999999999975431 110 0 000
Q ss_pred ------CCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEeccc-------ceEEEcc
Q psy16562 239 ------NDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKH-------QLQVIAS 305 (445)
Q Consensus 239 ------~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh-------~~~via~ 305 (445)
...+..++.+||||+.++ .++|++| +|||||||++.. +.+.|+|++| .|+|||+
T Consensus 242 ~~~g~p~~~~~~gd~~lVNG~~~p-----------~~~V~~g-~yRlRliNas~~-r~~~l~i~~h~g~~~~~~~~vIa~ 308 (612)
T 2g23_A 242 PETGKPVSIPFFGPYTTVNGRIWP-----------YADVDDG-WYRLRLVNASNA-RIYNLVLIDEDDRPVPGVVHQIGS 308 (612)
T ss_dssp SSSSCCEECCCCCSEEEETTEESC-----------EEEEESS-EEEEEEEECCSS-CCEEEEEECTTSCBCTTSEEEEEE
T ss_pred cccCcccccCCcCCEEEECCccCC-----------eEEecCC-eEEEEEEecCCC-eEEEEEEcCCCCccCCCcEEEEEe
Confidence 011357899999999764 8999999 999999999987 5899999999 7999999
Q ss_pred CCCcce-eeEec------EEEecCCceEEEEEecCCCCc-eEEEEEEecC----C-----CceeeEEEEEc--CCCCCCC
Q psy16562 306 DGTAVE-PLVVD------SVTLFPGDRVDVIIHTNQSNN-LYWMQAKTLC----D-----SITAEAVLQYE--GEKLTYV 366 (445)
Q Consensus 306 DG~~v~-P~~~~------~~~I~pGeR~dv~v~~~~~~G-~y~~~~~~~~----~-----~~~~~ail~y~--~~~~~~~ 366 (445)
||++++ |..++ .+.|+|||||||+|++++.+| +|+++..... . ......|+++. .......
T Consensus 309 DG~~l~~P~~~~~~~~~~~l~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~ 388 (612)
T 2g23_A 309 DGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDS 388 (612)
T ss_dssp TTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCC
T ss_pred CCeEccCCEEecccCcccEEEECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCC
Confidence 999995 99999 999999999999999998766 5777765421 0 01112344443 3221111
Q ss_pred CCCCCC-----CCCC----CC--------------CC---------------------------C---------CCCCCC
Q psy16562 367 SKRPKS-----DSFP----RG--------------KP---------------------------K---------DNSPRV 387 (445)
Q Consensus 367 ~~~P~~-----~~~~----~~--------------~~---------------------------~---------~~~~~~ 387 (445)
..+|.. ..+. .. .. . .|+..+
T Consensus 389 ~~~P~~L~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~ 468 (612)
T 2g23_A 389 FALPEVLSGSFRRMSHDIPHGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATF 468 (612)
T ss_dssp CCCCSSCCSSCCCCCTTSCCEEEEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECST
T ss_pred CCCChhhccccccCCcccccceeEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccC
Confidence 111211 0000 00 00 0 011111
Q ss_pred -ccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCC
Q psy16562 388 -PMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDG 430 (445)
Q Consensus 388 -~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG 430 (445)
....++++.|++++|+|+|.+.+.||| |||||+|||++++|
T Consensus 469 ~~~~~~~v~~G~~v~w~l~N~~~~~HPi--HlHg~~F~Vl~r~~ 510 (612)
T 2g23_A 469 NDGLGFTIGEGTHEQWTFLNLSPILHPM--HIHLADFQVLGRDA 510 (612)
T ss_dssp TSCCCEEEETTCEEEEEEEECSSSCEEE--EESSCCEEEEEEEE
T ss_pred CCCCceEecCCCEEEEEEEeCCCCCCCe--EEcCceEEEecccC
Confidence 122578999999999999999999998 99999999999753
No 18
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=5.7e-54 Score=425.82 Aligned_cols=266 Identities=26% Similarity=0.412 Sum_probs=222.6
Q ss_pred eEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEe
Q psy16562 57 VCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLH 136 (445)
Q Consensus 57 ~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiH 136 (445)
+++|+|+++... ....+|..+.+|+|||++|||+|+|++||+|+|+|+|.++ .+++||
T Consensus 2 ~~~~~l~~~~~~---------------------~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~siH 59 (318)
T 3g5w_A 2 KREFDLSIEDTR---------------------IVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTT-LPHTIH 59 (318)
T ss_dssp EEEEEEEEEEEE---------------------EEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSS-SCBCCE
T ss_pred eEEEEEEEEEEE---------------------EEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCC-CceeEE
Confidence 688999998753 2345789999999999999999999999999999999998 899999
Q ss_pred eCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhh---hcCceeEEEEeCCCCCCCCCCccccC
Q psy16562 137 WHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQK---MDGLEGSMIIRTPKTADPHAELYDFD 213 (445)
Q Consensus 137 wHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~---~~Gl~G~lIV~~~~~~~p~~~~~d~d 213 (445)
|||+++.+++++||+|++|||+|+||++++|+|+++++||||||||...+. .+||+|+|||++++.. ....++|
T Consensus 60 ~HG~~~~~~~~~DG~p~~t~~~i~PG~~~~y~f~~~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~---~~~~~~d 136 (318)
T 3g5w_A 60 WHGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKAEPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPL---PIEKTVT 136 (318)
T ss_dssp EETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCC---HHHHTCC
T ss_pred ecCcCCCCCcccCCCcccccccCCCCCEEEEEEEcCCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcc---ccccccc
Confidence 999999988899999999999999999999999999999999999986543 5899999999976422 1112344
Q ss_pred CcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEE
Q psy16562 214 LYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIF 293 (445)
Q Consensus 214 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~ 293 (445)
.|++|+|+||+++.... +. .....+..++.++|||+.++.. ..+++++|++|||||+|++.. .+.|
T Consensus 137 -~e~~l~l~dw~~~~~~~-~~--~~~~~~~~~d~~~ING~~~~~~--------~~l~v~~G~~vrlrliN~~~~--~h~~ 202 (318)
T 3g5w_A 137 -KDYILMLSDWVSSWANK-PG--EGGIPGDVFDYYTINAKSFPET--------QPIRVKKGDVIRLRLIGAGDH--VHAI 202 (318)
T ss_dssp -EEEEEEEEEECGGGTTC-TT--CCCCTTCCCCEEEETTBCBTSS--------CCEEECTTCEEEEEEEECSSS--CEEE
T ss_pred -ceeEEEEEeeccccccc-cc--cCCCCCCcCcEEEEcCcCCCCC--------ccEEeCCCCEEEEEEEeCCCc--eEEE
Confidence 37999999999864432 11 1112234678999999987532 358999999999999999975 4688
Q ss_pred EecccceEEEccCCCcc-eeeEecEEEecCCceEEEEEecCCCCceEEEEEEec-C-C-----CceeeEEEEEcCCC
Q psy16562 294 TIEKHQLQVIASDGTAV-EPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL-C-D-----SITAEAVLQYEGEK 362 (445)
Q Consensus 294 ~i~gh~~~via~DG~~v-~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~-~-~-----~~~~~ail~y~~~~ 362 (445)
+||||.|+||+.||.++ +|..++++.|.||||++++|++++ +|.|++|||.. . . .....++|.|.+..
T Consensus 203 hlhGh~f~vi~~dG~~~~~p~~~dtv~l~pger~~v~~~a~~-pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 203 HTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMDN-PGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EETTSCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECCS-CSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EECCcEEEEEecCCcccCCCccccEEEECCCCEEEEEEECCC-CeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 89999999999999998 588999999999999999999997 89999999987 2 1 13456899998865
No 19
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=1.7e-52 Score=419.14 Aligned_cols=267 Identities=27% Similarity=0.457 Sum_probs=222.1
Q ss_pred ceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceE
Q psy16562 56 LVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTL 135 (445)
Q Consensus 56 ~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsi 135 (445)
++++|+|+++... ....||.++.+|+|||++|||+|+|++||+|+|+|+|.++ .+++|
T Consensus 2 ~~~~~~l~~~~~~---------------------~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~-~~~si 59 (339)
T 2zwn_A 2 AEREFDMTIEEVT---------------------IKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTS-LPHTI 59 (339)
T ss_dssp CEEEEEEEEEEEE---------------------EEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESS-SCBCC
T ss_pred ceEEEEEEEEEEE---------------------EEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCC-CCccE
Confidence 4678999998743 2334799999999999999999999999999999999998 89999
Q ss_pred eeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccch--hhh-cCceeEEEEeCCCCCCCCCCcccc
Q psy16562 136 HWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGL--QKM-DGLEGSMIIRTPKTADPHAELYDF 212 (445)
Q Consensus 136 HwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~--q~~-~Gl~G~lIV~~~~~~~p~~~~~d~ 212 (445)
||||+++.+++||||+|++|||+|+||++|+|+|+++++||||||||... |.. +||+|++||+++.... .+..+
T Consensus 60 H~HG~~~~~~~~~DGvp~vtq~~I~PG~~~~y~f~~~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~---~~~~~ 136 (339)
T 2zwn_A 60 HWHGVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKADRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLP---IEKRV 136 (339)
T ss_dssp EEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCT---TGGGC
T ss_pred EeCCCCcCCCcccCCCCccccCccCCCCeEEEEEECCCCEEEEEEecCCchhhhhcCCceEeEEecCCCccc---ccccC
Confidence 99999999988999999999999999999999999999999999999864 777 9999999999764321 12233
Q ss_pred CCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEE
Q psy16562 213 DLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLI 292 (445)
Q Consensus 213 d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~ 292 (445)
| .|++|+|+||++..... . . ........++.++|||+.++. ...+++++|++|||||+|++.. .+.
T Consensus 137 d-~e~~l~l~d~~~~~~~~-~-~-~~g~~~~~~~~~~ING~~~~~--------~~~~~v~~G~~vrlrliN~~~~--~h~ 202 (339)
T 2zwn_A 137 T-KDVIMMMSTWESAVADK-Y-G-EGGTPMNVADYFSVNAKSFPL--------TQPLRVKKGDVVKIRFFGAGGG--IHA 202 (339)
T ss_dssp S-EEEEEEEEEECGGGTTC-T-T-CCCSTTSCCCEEEETTBCTTS--------SCCEEECTTCEEEEEEEECSSS--CEE
T ss_pred C-ceEEEEeeheecccccc-c-C-CCCCCccccceEEEccccCCC--------cccEEECCCCEEEEEEEeCCCc--eEE
Confidence 4 37999999998753321 1 0 001112357899999997653 2458999999999999999954 688
Q ss_pred EEecccceEEEccCCCcce-eeEecEEEecCCceEEEEEecCCCCceEEEEEEec--C-----CCceeeEEEEEcCCC
Q psy16562 293 FTIEKHQLQVIASDGTAVE-PLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--C-----DSITAEAVLQYEGEK 362 (445)
Q Consensus 293 ~~i~gh~~~via~DG~~v~-P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~-----~~~~~~ail~y~~~~ 362 (445)
|+||||.|+||+.||.+++ |..++++.|.||||++++|++++ +|.|++|||.. + ......++|+|.+..
T Consensus 203 ~hlhGh~f~vi~~DG~~~~~p~~~dtv~l~pg~r~~v~~~~~~-pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 203 MHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGERYDVIIEADN-PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEETTCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECCS-CSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEECCcEEEEEEeCCeecCCCcEEEEEEECCCCEEEEEEEeCC-CeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 9999999999999999997 88899999999999999999988 79999999976 2 223346899998765
No 20
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=4.5e-49 Score=392.47 Aligned_cols=266 Identities=18% Similarity=0.229 Sum_probs=218.3
Q ss_pred CCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCC-CC
Q psy16562 54 KPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID-RE 132 (445)
Q Consensus 54 ~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~-~~ 132 (445)
.+++.+|+|+++... ....||.++.+|+|||++|||+|+|++||+|+|+|+|.++. .+
T Consensus 35 ~~~~~~~~l~~~~~~---------------------~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~ 93 (327)
T 1kbv_A 35 YPAKVRVKMETVEKT---------------------MKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVP 93 (327)
T ss_dssp SCCEEEEEEEEEEEE---------------------EEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSC
T ss_pred CCCEEEEEEEEEEEE---------------------EEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCc
Confidence 468889999998753 22338999999999999999999999999999999999962 58
Q ss_pred ceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEeccc---chhhhcCceeEEEEeCCCCCCCCCCc
Q psy16562 133 VTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV---GLQKMDGLEGSMIIRTPKTADPHAEL 209 (445)
Q Consensus 133 tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~---~~q~~~Gl~G~lIV~~~~~~~p~~~~ 209 (445)
++|||||+. .+||++..+ .|.||++++|+|++.++||||||||. +.|+.+||+|+|||++++. .| .
T Consensus 94 ~~ih~HG~~-----~~dG~~~~~--~i~PG~~~~y~f~~~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~-~p---~ 162 (327)
T 1kbv_A 94 HNVDFHAAT-----GQGGGAAAT--FTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG-LP---K 162 (327)
T ss_dssp BCCEETTCC-----SGGGGTTTT--CBCTTEEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC-CC---C
T ss_pred eeeEeCccc-----cCCCCCcce--eecCCCEEEEEEECCCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC-CC---C
Confidence 999999985 378988654 59999999999999999999999996 6899999999999997632 12 2
Q ss_pred cccCCcceEEEEeeeeccCCCCcc---CCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCC
Q psy16562 210 YDFDLYSHVIIVTDWMHSMTDSKF---PGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSC 286 (445)
Q Consensus 210 ~d~d~~e~~l~l~D~~~~~~~~~~---~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~ 286 (445)
+ | .|++|+++||++....... ........+..++.++|||+.++.. ..+.+++++|++|||||+|++.
T Consensus 163 ~--d-~e~~l~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~~~iNG~~~~~~------~~~~l~v~~G~~vRlRliN~~~ 233 (327)
T 1kbv_A 163 V--D-KEFYIVQGDFYTKGKKGAQGLQPFDMDKAVAEQPEYVVFNGHVGALT------GDNALKAKAGETVRMYVGNGGP 233 (327)
T ss_dssp C--S-EEEEEEEEEECBSSCTTCCEEECBCHHHHHHTCCSEEEETTSTTTTS------GGGCEEEETTEEEEEEEEEEES
T ss_pred C--c-eEEEEEeeeeeccCccccccccccChhHhccCCCceEEEcCcccCCC------CceeEEeCCCCEEEEEEECCCC
Confidence 3 3 3799999999987532100 0000011124678999999987532 1257999999999999999997
Q ss_pred CceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec-C-CCceeeEEEEEcCCC
Q psy16562 287 LACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL-C-DSITAEAVLQYEGEK 362 (445)
Q Consensus 287 ~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~-~-~~~~~~ail~y~~~~ 362 (445)
. +.+.|+|+||.|+||+.||.+++|..++++.|+||||+|++|++++ +|.||+++|.. . ......++|+|.+..
T Consensus 234 ~-~~~~~~l~Gh~f~vi~~DG~~~~p~~~d~l~l~pGer~dv~v~~~~-pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 234 N-LVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDI-PGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp S-CCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEEECS-CEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred C-CceeEEEeCCEEEEEEcCCCcCCCCceeEEEECCCCEEEEEEEeCC-CeEEEEEeccccccccCCcEEEEEECCCC
Confidence 5 4789999999999999999999999999999999999999999997 79999999987 2 344568999998764
No 21
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=4.3e-48 Score=378.81 Aligned_cols=239 Identities=20% Similarity=0.253 Sum_probs=202.7
Q ss_pred CceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCce
Q psy16562 55 PLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVT 134 (445)
Q Consensus 55 p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ts 134 (445)
..+++|+++++... ....+|..+.+|+|||++|||+|+|++||+|+|+|+|.|+ ++++
T Consensus 32 ~~~~~~~l~~~~~~---------------------~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~-~~~~ 89 (288)
T 3gdc_A 32 RTLREWDIVAVDKD---------------------FEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGA-HPHT 89 (288)
T ss_dssp CEEEEEEEEEEEEE---------------------EEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSS-SCBC
T ss_pred CcEEEEEEEEEEEE---------------------EEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCC-Cccc
Confidence 55788999998643 2234599999999999999999999999999999999998 8999
Q ss_pred EeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccc---hhhhcCceeEEEEeCCCCCCCCCCccc
Q psy16562 135 LHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVG---LQKMDGLEGSMIIRTPKTADPHAELYD 211 (445)
Q Consensus 135 iHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~---~q~~~Gl~G~lIV~~~~~~~p~~~~~d 211 (445)
|||||++. .++||+|+++||+|+||++++|+|+++++||||||||.. .|+.+||+|+|||+++... .+
T Consensus 90 iH~HG~~~---~~~DG~p~~~~~~i~PG~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~------~~ 160 (288)
T 3gdc_A 90 IHFHGVHR---ATMDGTPGIGAGSIAPGQSFTYEFDATPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGR------PP 160 (288)
T ss_dssp CEESSCCC---GGGSCCTTSTTCSBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCC------CC
T ss_pred EEeccccc---cccCCCCCccceeECCCCEEEEEEEcCCCccEEEEecCcchHHHHhCcCeEEEEEeCCccC------CC
Confidence 99999973 489999999999999999999999999999999999986 7999999999999987432 12
Q ss_pred cCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeE
Q psy16562 212 FDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPL 291 (445)
Q Consensus 212 ~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~ 291 (445)
.| .|++|+++||+.++ +..++.++|||+.+.+ ..+.++++.|++||||++|++.....+
T Consensus 161 ~d-~e~~l~~~d~~~~~-------------g~~~~~~~iNG~~~~~-------~~~~l~v~~Ge~vr~~l~N~g~~~~~H 219 (288)
T 3gdc_A 161 AD-DEMVMVMNGYNTDG-------------GDDNEFYSVNGLPFHF-------MDFPVKVKQHELVRIHLINVLEYDPIN 219 (288)
T ss_dssp CS-EEEEEEEEEECCSS-------------TTCCSEEEETTSTTHH-------HHSCEEEETTCCEEEEEEECCCSSSEE
T ss_pred Cc-ceEEEEEeeEecCC-------------CCCcceEEECcccccc-------cCcccccCCCCEEEEEEEeCCCCCcce
Confidence 22 38999999998652 2246789999997631 123689999999999999998532257
Q ss_pred EEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec
Q psy16562 292 IFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 292 ~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~ 346 (445)
.|+||||.|.|++.++...+|...+++.|.|||++++++++++ +|.|.+|||..
T Consensus 220 ~fHlhG~~f~v~~~g~~~~~~~~~Dtv~v~pg~~~~v~~~~~~-pG~~~~hCH~~ 273 (288)
T 3gdc_A 220 SFHIHGNFFHYYPTGTMLTPSEYTDTISQVQGQRGILELRFPY-PGKFMFHAHKT 273 (288)
T ss_dssp EEEETTCCEEEEETTCCSSCSEEESEEEEETTCEEEEEECCCS-CEEEEEECSSH
T ss_pred eEEEcCCEEEEEcCCCccCCCceeeEEEeCCCceEEEEEECCC-CEEEEEEecCh
Confidence 8899999999998544333478899999999999999999987 89999999987
No 22
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=6.8e-46 Score=370.63 Aligned_cols=273 Identities=17% Similarity=0.174 Sum_probs=213.8
Q ss_pred CCCCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCC
Q psy16562 52 NAKPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDR 131 (445)
Q Consensus 52 ~~~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~ 131 (445)
.+.+++++|+|+++... ....+|.++.+|+|||++|||+|+|++||+|+|+|+|.
T Consensus 27 ~~~~~~~~~~l~~~~~~---------------------~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---- 81 (333)
T 1mzy_A 27 ASGPVINEFEMRIIEKE---------------------VQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---- 81 (333)
T ss_dssp SSSCCEEEEEEEEEEEE---------------------EEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC----
T ss_pred CCCCcEEEEEEEEEEEE---------------------EEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC----
Confidence 44688999999998753 22347999999999999999999999999999999998
Q ss_pred CceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccc-----hhhhcCceeEEEEeCCCCC-CC
Q psy16562 132 EVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVG-----LQKMDGLEGSMIIRTPKTA-DP 205 (445)
Q Consensus 132 ~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~-----~q~~~Gl~G~lIV~~~~~~-~p 205 (445)
.+++||||+++.+...+||.+.++| |+||++++|+|++.++||||||||.. .|+.+||+|+|||++++.. .+
T Consensus 82 ~~~~h~Hg~~~~~~~~~~~~~~~~~--i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~ 159 (333)
T 1mzy_A 82 PENTMPHNIDFHAATGALGGGGLTL--INPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDH 159 (333)
T ss_dssp TTCCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCT
T ss_pred CCCcccccceecCCCCCCCCCceeE--eCCCCEEEEEEECCCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCcccc
Confidence 4789999999876555666677774 99999999999999999999999985 7999999999999976432 12
Q ss_pred CCCccccCCcceEEEEeeeeccC--CCCc--cCCC-------CCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecC
Q psy16562 206 HAELYDFDLYSHVIIVTDWMHSM--TDSK--FPGN-------TYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRD 274 (445)
Q Consensus 206 ~~~~~d~d~~e~~l~l~D~~~~~--~~~~--~~~~-------~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G 274 (445)
...++++| .|++|+++||++.. .... +... .....+..++.++|||+..... ..+.++|++|
T Consensus 160 ~~~p~~~d-~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~~~------~~~~l~v~~G 232 (333)
T 1mzy_A 160 EGKPVRYD-TVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAVMDTLIPSHIVFNGAVGALT------GEGALKAKVG 232 (333)
T ss_dssp TSCBCCCS-EEEEEEEEEECCCBCTTSCBCCCSSHHHHHHHHHHHHTTTCCSEEEETTSTTTTS------GGGCEEEETT
T ss_pred ccCCCccc-hheeeeeeeeccCccccccccccccccccccchhHHhhccCCcEEEECCcccccC------CCcceEecCC
Confidence 22345555 37999999999842 2221 1100 0001235789999999975321 1357999999
Q ss_pred cEEEEEEEccCCCceeEEEEecccceEEEccCCCcce-ee-EecEEEecCCceEEEEEecCCCCceEEEEEEec--CCCc
Q psy16562 275 KRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE-PL-VVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CDSI 350 (445)
Q Consensus 275 ~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~-P~-~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~~~ 350 (445)
++||||++|++... .+++ +++|.++|++ ||.+++ |. .++++.|.||||+|++|++++ +|+||+|||.. +...
T Consensus 233 er~Rl~n~~~~~~~-~~h~-i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~-pG~y~~~ch~~~h~~~~ 308 (333)
T 1mzy_A 233 DNVLFVHSQPNRDS-RPHL-IGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQ-PGVYAYVNHNLIEAVHK 308 (333)
T ss_dssp CEEEEEEEESSSCB-CEEE-ETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHTT
T ss_pred CEEEEEECCCCCcc-ccEE-ECCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCC-CEEEEEecChhhhHhhC
Confidence 99999888776542 3443 8999999999 999997 44 589999999999999999998 79999999987 2255
Q ss_pred eeeEEEEEcCCC
Q psy16562 351 TAEAVLQYEGEK 362 (445)
Q Consensus 351 ~~~ail~y~~~~ 362 (445)
...++++|.+..
T Consensus 309 Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 309 GATAHVLVEGEW 320 (333)
T ss_dssp CCEEEEEEESCC
T ss_pred CCEEEEEEcCCC
Confidence 667889998743
No 23
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=1.7e-46 Score=365.26 Aligned_cols=230 Identities=21% Similarity=0.275 Sum_probs=191.7
Q ss_pred CCCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCC
Q psy16562 53 AKPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDRE 132 (445)
Q Consensus 53 ~~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ 132 (445)
...++++|+|+++... .+......+++||++|||+|||++||+|+|+|+|+|+ ++
T Consensus 3 ~~g~~~~~~l~~~~~~------------------------~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~-~~ 57 (276)
T 3kw8_A 3 AGGEVRHLKMYAEKLA------------------------DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMD-VR 57 (276)
T ss_dssp -CCCEEEEEEEEEECT------------------------TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSS-SC
T ss_pred CcceEEEEEEEEEeCC------------------------CCceecceeccCCcccCCeEEEECCCEEEEEEEECCC-CC
Confidence 3567899999998631 2334456678999999999999999999999999998 89
Q ss_pred ceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCC-------------CcceEEeccc------chhhhcCcee
Q psy16562 133 VTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMP-------------SGTFFYHSHV------GLQKMDGLEG 193 (445)
Q Consensus 133 tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~-------------~GT~wYH~H~------~~q~~~Gl~G 193 (445)
+||||||+++.. ++||++ +|||+|+||++|+|+|++.+ +||||||||. ..|+.+||+|
T Consensus 58 ~siH~HG~~~~~--~~DG~~-~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G 134 (276)
T 3kw8_A 58 ASLHVHGLDYEI--SSDGTA-MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYG 134 (276)
T ss_dssp BCCEESSSBCCG--GGSCCT-TTTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEE
T ss_pred ccEeecCcccCC--ccCCCc-CCcCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEE
Confidence 999999999976 799999 89999999999999999964 7999999998 3689999999
Q ss_pred EEEEeCCCCCCCCCCccccCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEec
Q psy16562 194 SMIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQR 273 (445)
Q Consensus 194 ~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~ 273 (445)
+|||+++.... . | .|++|+++|| +|||+.+. +.+.|+++.
T Consensus 135 ~liV~~~~~~~-----~--d-rE~~l~l~~~------------------------~iNG~~~~--------~~p~i~v~~ 174 (276)
T 3kw8_A 135 PVIVRRKGDVL-----P--D-ATHTIVFNDM------------------------TINNRKPH--------TGPDFEATV 174 (276)
T ss_dssp EEEEECTTCCC-----C--S-EEEEEEEETT------------------------EETTCCTT--------CCCCEEEET
T ss_pred EEEEecCCCcc-----c--c-cceEEEeccc------------------------ccceeccc--------CCCCEEEec
Confidence 99999875432 1 3 3788888764 78998653 357899999
Q ss_pred CcEEEEEEEccCCCceeEEEEecccceEEEccCCCcc----eeeEecEEEecCCceEEEEEecCC--CCceEEEEEEec-
Q psy16562 274 DKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV----EPLVVDSVTLFPGDRVDVIIHTNQ--SNNLYWMQAKTL- 346 (445)
Q Consensus 274 G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v----~P~~~~~~~I~pGeR~dv~v~~~~--~~G~y~~~~~~~- 346 (445)
|++|||||+|.+.. .+.|+||||.|.+++ ||... .+..++++.|.||+++++++.+++ .+|.|++|||..
T Consensus 175 G~~vri~l~N~~~~--~Hp~HlHG~~f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~~~ 251 (276)
T 3kw8_A 175 GDRVEIVMITHGEY--YHTFHMHGHRWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQS 251 (276)
T ss_dssp TCEEEEEEEEESSC--CEEEEETTCCEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHH
T ss_pred CCEEEEEEecCCCc--ceeEEEccceeEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCCch
Confidence 99999999999975 578889999999875 66432 245789999999999999999985 589999999987
Q ss_pred --CCCceee
Q psy16562 347 --CDSITAE 353 (445)
Q Consensus 347 --~~~~~~~ 353 (445)
..++.+.
T Consensus 252 H~~~GM~g~ 260 (276)
T 3kw8_A 252 HSDMGMVGL 260 (276)
T ss_dssp HHHTTCEEE
T ss_pred HhhCCCeEE
Confidence 3444444
No 24
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=2.9e-45 Score=366.47 Aligned_cols=271 Identities=18% Similarity=0.228 Sum_probs=211.0
Q ss_pred CCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCc
Q psy16562 54 KPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREV 133 (445)
Q Consensus 54 ~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~t 133 (445)
.+++++|+|++.... ..+.+||.++.+|+|||++|||+|+|++||+|+|+|+|.+.
T Consensus 29 ~~~~~~~~l~~~~~~--------------------~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---- 84 (336)
T 1oe1_A 29 GPKVVEFTMTIEEKK--------------------MVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---- 84 (336)
T ss_dssp CCCEEEEEEEEEEEE--------------------EECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT----
T ss_pred CCcEEEEEEEEEEEE--------------------EEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC----
Confidence 578899999998753 23457899999999999999999999999999999999974
Q ss_pred eEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEeccc----chhhhcCceeEEEEeCCCCC-CCCCC
Q psy16562 134 TLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV----GLQKMDGLEGSMIIRTPKTA-DPHAE 208 (445)
Q Consensus 134 siHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~----~~q~~~Gl~G~lIV~~~~~~-~p~~~ 208 (445)
++||||+++.+.+++||.+.++| |+||++|+|+|+++++||||||||. +.|+.+||+|+|||++++.. ++...
T Consensus 85 ~~~~h~~~~h~~~~~~~~~~~~~--i~pG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~ 162 (336)
T 1oe1_A 85 NAMPHNVDFHGATGALGGAKLTN--VNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGK 162 (336)
T ss_dssp CCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSC
T ss_pred CCccccceECCCCCCCCCcceEE--eCCCCEEEEEEECCCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccC
Confidence 46788888777667788777775 9999999999999999999999997 47999999999999976432 22333
Q ss_pred ccccCCcceEEEEeeeeccCCCC-ccCCCCCC----------CCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEE
Q psy16562 209 LYDFDLYSHVIIVTDWMHSMTDS-KFPGNTYN----------DTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRY 277 (445)
Q Consensus 209 ~~d~d~~e~~l~l~D~~~~~~~~-~~~~~~~~----------~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~ 277 (445)
+.++|. |++|+++||++..+.. .+...... ..+..++.++|||+.++.+ ..+.++|++|++|
T Consensus 163 ~~~~D~-e~~l~~~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~------~~~~l~v~~Gerv 235 (336)
T 1oe1_A 163 PLHYDR-AYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGALT------GANALTAKVGETV 235 (336)
T ss_dssp BCCCSE-EEEEEEEEECCCBCTTSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTTTS------GGGCEEEETTCEE
T ss_pred cccCCc-eeEeeeeeeeeccccCCceeecccccccccchhhHhhcCCCCEEEECCeeccCC------CCcceEcCCCCEE
Confidence 445553 7999999999853211 11100000 1135789999999976421 1368999999988
Q ss_pred EEEEEccCCCceeEE-EEecccceEEEccCCCcceee--EecEEEecCCceEEEEEecCCCCceEEEEEEec--CCCcee
Q psy16562 278 LMRIIGGSCLACPLI-FTIEKHQLQVIASDGTAVEPL--VVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CDSITA 352 (445)
Q Consensus 278 rlRliN~~~~~~~~~-~~i~gh~~~via~DG~~v~P~--~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~~~~~ 352 (445)
||+..+++.. +. ..|++|.++|++ ||.+++|. .++++.|.||||+|++|++++ +|+||+++|.. +.....
T Consensus 236 Rlin~~~~~~---~~~~~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~-pG~y~~~~h~~~~~~~~G~ 310 (336)
T 1oe1_A 236 LLIHSQANRD---TRPHLIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PGVYAYLNHNLIEAFELGA 310 (336)
T ss_dssp EEEEEESSSC---BCEEETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHTTSC
T ss_pred EEEecCCCCc---cceEEECCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC-CceEEEEechhhccccCCC
Confidence 7755544433 23 447999999998 99999853 468999999999999999998 79999999986 324556
Q ss_pred eEEEEEcCCC
Q psy16562 353 EAVLQYEGEK 362 (445)
Q Consensus 353 ~ail~y~~~~ 362 (445)
.++++|.+..
T Consensus 311 ~~~~~V~~~~ 320 (336)
T 1oe1_A 311 AGHIKVEGKW 320 (336)
T ss_dssp EEEEEEESCC
T ss_pred eEEEEECCCC
Confidence 7889998654
No 25
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=7.5e-46 Score=383.94 Aligned_cols=267 Identities=16% Similarity=0.207 Sum_probs=219.8
Q ss_pred CCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCC-CC
Q psy16562 54 KPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID-RE 132 (445)
Q Consensus 54 ~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~-~~ 132 (445)
.+.+.+|+|+++... ...+||..+.+|+|||++|||+|+|++||+|+|+|.|.|+. .+
T Consensus 25 ~~~~~~~~l~~~~~~---------------------~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~ 83 (442)
T 2zoo_A 25 HSAKVVINLETREQV---------------------GRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMP 83 (442)
T ss_dssp SCCEEEEEEEEEEEE---------------------EEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSC
T ss_pred CCcEEEEEEEEEEEE---------------------EEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCC
Confidence 467889999998753 22358999999999999999999999999999999999863 59
Q ss_pred ceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecc---cchhhhcCceeEEEEeCCCCCCCCCCc
Q psy16562 133 VTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSH---VGLQKMDGLEGSMIIRTPKTADPHAEL 209 (445)
Q Consensus 133 tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H---~~~q~~~Gl~G~lIV~~~~~~~p~~~~ 209 (445)
++|||||+.+ +||++..+ +|+||++++|+|++.++|||||||| .+.|+.+||+|+|||++++.. | .
T Consensus 84 ~~iH~HG~~~-----~dG~~~~~--~i~pg~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~-~---~ 152 (442)
T 2zoo_A 84 HNIDLHAVTG-----PGGGAESS--FTAPGHTSTFNFKALNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL-A---P 152 (442)
T ss_dssp BCCEETTCCS-----GGGGGGGC--CBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC-C---C
T ss_pred CCEEecCCcC-----CCCCCccE--EECCCCEEEEEEEcCCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC-C---C
Confidence 9999999873 78988755 6999999999999999999999997 469999999999999965321 1 2
Q ss_pred cccCCcceEEEEeeeeccCCCCccC---CCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCC
Q psy16562 210 YDFDLYSHVIIVTDWMHSMTDSKFP---GNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSC 286 (445)
Q Consensus 210 ~d~d~~e~~l~l~D~~~~~~~~~~~---~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~ 286 (445)
+| .|++|+++||++........ .......+..++.++|||+.++.. ..+.|++++|++|||||+|++.
T Consensus 153 ~d---~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~------~~~~l~v~~G~~vrlrliN~~~ 223 (442)
T 2zoo_A 153 VD---REYYLVQGDFYTKGEFGEAGLQPFDMAKAIDEDADYVVFNGSVGSTT------DENSLTAKVGETVRLYIGNGGP 223 (442)
T ss_dssp CS---EEEEEEEEEECBSSCTTCCEEECBCHHHHHTTCCSEEEETTSTTTTS------GGGCEEEETTCEEEEEEEEEES
T ss_pred CC---ceEEEEeeeeeccCcccccccccCChhHhccCCCCEEEECCCcCCCC------CCCceEeCCCCEEEEEEEeCCC
Confidence 33 37999999999875421100 000011235679999999976421 1258999999999999999987
Q ss_pred CceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEecC--CCceeeEEEEEcCCCC
Q psy16562 287 LACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTLC--DSITAEAVLQYEGEKL 363 (445)
Q Consensus 287 ~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~~--~~~~~~ail~y~~~~~ 363 (445)
. ..+.|+|+||.|+||+.||.+++|..++++.|.||||+|++|++++ +|+||+++|..+ ......++|+|.+...
T Consensus 224 ~-~~~~~~i~g~~~~vi~~DG~~~~p~~~~~~~l~pg~r~~v~v~~~~-~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 224 N-LVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVEV-PGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp S-CCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEECCS-CEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred C-CceeeEEcCCEEEEEecCCccCCCccceEEEECCCeeEEEEEEcCC-CCeEEEEecccccccccCceEEEEecCCCC
Confidence 5 4689999999999999999999999999999999999999999997 799999998873 3556789999987654
No 26
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=1.5e-45 Score=416.46 Aligned_cols=352 Identities=15% Similarity=0.164 Sum_probs=238.5
Q ss_pred CCCceEEEEEEEEEeeecCccccc--cC--CCcccc----cccceeecCCCeEEEEE-------EECCC--------CCC
Q psy16562 53 AKPLVCYYSFTLENYATVGPACAD--CL--KGNQKA----CRRKGCVTADGFERAIL-------SINRQ--------LPG 109 (445)
Q Consensus 53 ~~p~~~~y~~~i~~~~~~~~~~~~--~~--~~~~~~----~~~~~~~~~dG~~~~~~-------~~Ng~--------~PG 109 (445)
...++++|.+-+++.. |..... +. ....+. .....-....|..+..+ +||+. +||
T Consensus 17 ~~~~~r~y~i~~~~~~--w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PG 94 (1065)
T 2j5w_A 17 AWAKEKHYYIGIIETT--WDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLG 94 (1065)
T ss_dssp ---CEEEEEEEEEEEE--EESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSC
T ss_pred cccceeEEEEEEEEEE--eecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcC
Confidence 3467999999988653 211100 00 000000 01111222345555555 56766 999
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccC----CCCCCCCCCc--ccccCCCCCCceEEEEecCC----------
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQK----VTPWMDGVPM--VTQCPIPSSTTFRYKFPAMP---------- 173 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~----~~~~~DGvp~--~tq~pI~pG~~~~Y~f~~~~---------- 173 (445)
|+|||++||+|+|+|+|+|+ +++||||||++++ +.+|+||+++ +|||+|+||++|+|+|++.+
T Consensus 95 P~Ir~~~GD~v~v~v~N~l~-~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~ 173 (1065)
T 2j5w_A 95 PIIKAETGDKVYVHLKNLAS-RPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGN 173 (1065)
T ss_dssp CCEEEETTCEEEEEEEEESS-SCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCS
T ss_pred CeEEEeCCeEEEEEEEECCC-CCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCC
Confidence 99999999999999999999 8999999999987 5578899998 89999999999999999986
Q ss_pred CcceEEecccch--hhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEee------eeccCCCCccCCCC--CCCCC-
Q psy16562 174 SGTFFYHSHVGL--QKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTD------WMHSMTDSKFPGNT--YNDTR- 242 (445)
Q Consensus 174 ~GT~wYH~H~~~--q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D------~~~~~~~~~~~~~~--~~~~~- 242 (445)
+||||||||++. |+++||+|+|||++++... ...++++|. |++|+|+| |++......+.... ....+
T Consensus 174 aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~-~p~~~~~d~-e~~l~l~d~d~~~~w~~~~~~~~~~~~p~~~~~~~~ 251 (1065)
T 2j5w_A 174 CVTRIYHSHIDAPKDIASGLIGPLIICKKDSLD-KEKEKHIDR-EFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNE 251 (1065)
T ss_dssp EEEEEEECCSSHHHHHHHTCEEEEEEECTTCBS-SSSBTTCCE-EEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCCTTCH
T ss_pred ceEEEEEeccCchhHhhCccEEEEEEecCcccC-CCccCCCcc-ceEEEeeeecCCccccccchhhhhhcCccccccccc
Confidence 399999999875 4689999999999875432 112345553 89999994 55432111111000 00000
Q ss_pred ---CCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEE
Q psy16562 243 ---IKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVT 319 (445)
Q Consensus 243 ---~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~ 319 (445)
..+..++|||+.+.+ .+.++|++|++|||||+|++.....+.|+||||.|++ +|..++++.
T Consensus 252 ~~~~~~~~~~iNG~~~~~--------~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~v--------~p~~~dtv~ 315 (1065)
T 2j5w_A 252 DFQQSNRMYSVNGYTFGS--------LSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN--------KNYRIDTIN 315 (1065)
T ss_dssp HHHHHTEEEEETTEETTC--------CCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEEE--------TTEEESEEE
T ss_pred cccccCcEEEECCccCCC--------CcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEEE--------CCeeecEEE
Confidence 124579999997531 3578999999999999999965346899999999993 367899999
Q ss_pred ecCCceEEEEEecCCCCceEEEEEEec-CCCceeeEEEEEcCCCCCCCCCCCCC--------------------------
Q psy16562 320 LFPGDRVDVIIHTNQSNNLYWMQAKTL-CDSITAEAVLQYEGEKLTYVSKRPKS-------------------------- 372 (445)
Q Consensus 320 I~pGeR~dv~v~~~~~~G~y~~~~~~~-~~~~~~~ail~y~~~~~~~~~~~P~~-------------------------- 372 (445)
|+||||+||+|++++ +|.|+||||.. .......+.+++.+....+..+.|.-
T Consensus 316 I~pGer~dVlv~~~~-pG~y~i~~h~~~h~~~Gm~~~~~V~~~~~~~~~~~~~g~~~~~~~i~A~e~~wdy~~~~~~~~~ 394 (1065)
T 2j5w_A 316 LFPATLFDAYMVAQN-PGEWMLSCQNLNHLKAGLQAFFQVQECNKSSSKDNIRGKHVRHYYIAAEEIIWNYAPSGIDIFT 394 (1065)
T ss_dssp ECBTCEEEEEEECCS-CEEEEEEECSHHHHHTTCEEEEEEECSCCCCCCCCCTTSEEEEEEEEEEEEEEESCTTSBCTTT
T ss_pred ECCCcEEEEEEEeCC-CeeEEEEecCcchhhCCCEEEEEEecCCCccccccccccceeEEEEeceecccccCCCCccccc
Confidence 999999999999998 79999999977 21122344555554322110000100
Q ss_pred ------C-C-----CCCCCC------------------C-CCCCCCc--------cceeEeeCCcEEEEEEEcCCCCccc
Q psy16562 373 ------D-S-----FPRGKP------------------K-DNSPRVP--------MHFFKVQRDKRYLMRIIGGSCLACP 413 (445)
Q Consensus 373 ------~-~-----~~~~~~------------------~-~~~~~~~--------~~~~~v~~G~~~~~rliN~s~~~Hp 413 (445)
. . +.+... + .+..+.+ -+.+.++.|+++++.|.|.+...|+
T Consensus 395 ~~~~~~~~s~~~~~l~~~~~~ig~~y~k~v~~~y~d~~f~~~~~~~~~~~~~g~lgpvi~a~~gd~i~i~f~N~~~~~~s 474 (1065)
T 2j5w_A 395 KENLTAPGSDSAVFFEQGTTRIGGSYKKLVYREYTDASFTNRKERGPEEEHLGILGPVIWAEVGDTIRVTFHNKGAYPLS 474 (1065)
T ss_dssp CCBTTCTTCTTHHHHCCBTTBCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSSSCBC
T ss_pred ccccCCCcccchhhhccCCcccCceEeeeeeecccCCceEEcCcCCcccccccccCceEEEeCCCEEEEEEEECCCCCcc
Confidence 0 0 000000 0 0011111 1268999999999999999887777
Q ss_pred eEEEEeCeeEEEEec
Q psy16562 414 LIFTIEKHQLQVIAS 428 (445)
Q Consensus 414 ~~~hihgh~f~Vi~~ 428 (445)
+ |+||+.|.|.+.
T Consensus 475 ~--h~hG~~f~~~~~ 487 (1065)
T 2j5w_A 475 I--EPIGVRFNKNNE 487 (1065)
T ss_dssp C--EEESSBCCGGGC
T ss_pred C--cccceeeeccCC
Confidence 6 999999998875
No 27
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=2e-44 Score=360.94 Aligned_cols=270 Identities=18% Similarity=0.205 Sum_probs=208.5
Q ss_pred CCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCc
Q psy16562 54 KPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREV 133 (445)
Q Consensus 54 ~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~t 133 (445)
.+++.+|+|++.... ..+.+||..+.+|+|||++|||+|+|++||+|+|+|+|.+ +
T Consensus 35 ~~~~~~~~l~~~~~~--------------------~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~----~ 90 (340)
T 2bw4_A 35 GPRVVEFTMTIEEKK--------------------LVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD----T 90 (340)
T ss_dssp SCCEEEEEEEEEEEE--------------------EECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT----T
T ss_pred CCcEEEEEEEEEEEE--------------------EEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC----C
Confidence 478899999998753 2344679999999999999999999999999999999997 6
Q ss_pred eEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccc----hhhhcCceeEEEEeCCCCC-CCCCC
Q psy16562 134 TLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVG----LQKMDGLEGSMIIRTPKTA-DPHAE 208 (445)
Q Consensus 134 siHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~----~q~~~Gl~G~lIV~~~~~~-~p~~~ 208 (445)
++||||+++.+....||.+.++| |.||++++|+|+++++||||||||.. .|+.+||+|+|||++++.. +....
T Consensus 91 ~~~~hg~~~~~~~~~~~~~~~~~--i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~ 168 (340)
T 2bw4_A 91 NTLLHNIDFHAATGALGGGALTQ--VNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQ 168 (340)
T ss_dssp CCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSC
T ss_pred CCccCcceeCCcCCCCCCccceE--eCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCC
Confidence 79999999876544555555664 99999999999999999999999974 7999999999999986431 11122
Q ss_pred ccccCCcceEEEEeeeecc--CCCCccCCCCCC-----------CCCCCCCeEEEccccCCCCCCCCCcccceEEEecCc
Q psy16562 209 LYDFDLYSHVIIVTDWMHS--MTDSKFPGNTYN-----------DTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDK 275 (445)
Q Consensus 209 ~~d~d~~e~~l~l~D~~~~--~~~~~~~~~~~~-----------~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~ 275 (445)
+.++| .|++|+++||++. ..+. +.. +.. ..+..++.++|||+.+... ..+.++|++|+
T Consensus 169 p~~~d-~e~~l~l~D~~~~~~~~g~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~------~~~~l~v~~G~ 239 (340)
T 2bw4_A 169 PLTYD-KIYYVGEQDFYVPKDEAGN-YKK-YETPGEAYEDAVKAMRTLTPTHIVFNGAVGALT------GDHALTAAVGE 239 (340)
T ss_dssp EECCS-EEEEEEEEEECCCBCTTSC-BCC-CCSHHHHHHHHHHHHHTTCCSEEEETTSTTTTS------GGGCEEEETTC
T ss_pred CcCcc-eeEEEeeeeeeeccccCCc-ccc-cccccccccchhhHhhcCCCCEEEECCccCCcc------CCCceEcCCCC
Confidence 34455 3789999999984 2222 110 000 0135678999999976321 13689999999
Q ss_pred EEEEEEEccCCCceeEEEEecccceEEEccCCCcce-ee-EecEEEecCCceEEEEEecCCCCceEEEEEEec--CCCce
Q psy16562 276 RYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE-PL-VVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CDSIT 351 (445)
Q Consensus 276 ~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~-P~-~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~~~~ 351 (445)
++||++.|.+... .+. .+++|.++|++ ||.++. |. .++++.|.||||+|++|++++ +|.||+|||.. .....
T Consensus 240 r~Rl~n~~~~~~~-~~~-~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~-pG~y~~~~h~~~~h~~~G 315 (340)
T 2bw4_A 240 RVLVVHSQANRDT-RPH-LIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PGVYAYVNHNLIEAFELG 315 (340)
T ss_dssp EEEEEEEESSSCB-CEE-EETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHTTS
T ss_pred EEEEEECCCCCcc-ceE-EecCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC-CeeeEEEcCchHHHHhCC
Confidence 9988877766443 222 38999999997 998886 43 589999999999999999998 79999999986 22344
Q ss_pred eeEEEEEcCCC
Q psy16562 352 AEAVLQYEGEK 362 (445)
Q Consensus 352 ~~ail~y~~~~ 362 (445)
..++++|.+..
T Consensus 316 m~~~~~V~~~~ 326 (340)
T 2bw4_A 316 AAGHFKVTGEW 326 (340)
T ss_dssp CEEEEEEESCC
T ss_pred CEEEEEECCCC
Confidence 56788888754
No 28
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=1.7e-44 Score=357.36 Aligned_cols=205 Identities=21% Similarity=0.311 Sum_probs=174.4
Q ss_pred eEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC---
Q psy16562 96 FERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM--- 172 (445)
Q Consensus 96 ~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~--- 172 (445)
..+.++..||++|||+|||++||+|+|+|+|+|+ +++||||||+++.. .+||++ .+||+|+||++|+|+|++.
T Consensus 28 ~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~--~~dG~~-~~~~~i~PG~~~~Y~~~~~~P~ 103 (313)
T 3tas_A 28 MGYGLEKGKATIPGPLIELNEGDTLHIEFENTMD-VPVSLHVHGLDYEI--SSDGTK-QSRSDVEPGGTRTYTWRTHVPG 103 (313)
T ss_dssp EEEESSTTCCBSSCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG--GGSCST-TTTCCBCTTCEEEEEEBCCCCE
T ss_pred eeeeeecCCccccCCeEEEECCCEEEEEEEECCC-CCccEeecCCcCCc--cCCCCc-cccCCcCCCCEEEEEEEeccCC
Confidence 3566777899999999999999999999999998 89999999999865 799998 5999999999999999874
Q ss_pred ----------CCcceEEecccc------hhhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEeeeeccCCCCccCCC
Q psy16562 173 ----------PSGTFFYHSHVG------LQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGN 236 (445)
Q Consensus 173 ----------~~GT~wYH~H~~------~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~ 236 (445)
++||||||||.. .|+.+||+|+|||+++... .+ | .|++|+++||+
T Consensus 104 ~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~--d-~e~~l~~~d~t----------- 164 (313)
T 3tas_A 104 RRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LP--D-RTHTIVFNDMT----------- 164 (313)
T ss_dssp ECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CC--S-EEEEEEEETTE-----------
T ss_pred ccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----cc--c-ccceeeccchh-----------
Confidence 579999999963 4578999999999987432 12 3 37999999985
Q ss_pred CCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcce---ee
Q psy16562 237 TYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE---PL 313 (445)
Q Consensus 237 ~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~---P~ 313 (445)
+||+..+. .+.+.++.|++|||||+|++.. .+.|+||||.|.+++.||.... |.
T Consensus 165 -------------~Ng~~~~~--------~~~l~v~~Ge~vr~~liN~g~~--~hpfHlHGh~F~v~~~~~~~~~~~~~~ 221 (313)
T 3tas_A 165 -------------INNRPAHT--------GPDFEATVGDRVEFVMITHGEY--YHTFHLHGHRWADNRTGMLTGPDDPSQ 221 (313)
T ss_dssp -------------ETTCCTTC--------CCCEEEETTCEEEEEEEEESSC--CEEEEETTCCEESSTTSSCCSTTCCCC
T ss_pred -------------cccCCccc--------ccccccccCCEEEEEEeccccc--ceeeeecCCeeEEEEECCccCCCCCCe
Confidence 34444322 2568999999999999999965 4678899999999999887653 67
Q ss_pred EecEEEecCCceEEEEEecCC--CCceEEEEEEec
Q psy16562 314 VVDSVTLFPGDRVDVIIHTNQ--SNNLYWMQAKTL 346 (445)
Q Consensus 314 ~~~~~~I~pGeR~dv~v~~~~--~~G~y~~~~~~~ 346 (445)
.++++.|.||||++++|.+.+ .||.|.+|||..
T Consensus 222 ~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~ 256 (313)
T 3tas_A 222 VIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQ 256 (313)
T ss_dssp EESEEEECTTCEEEEEEETTTTTCSEEEEEEECSH
T ss_pred eeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCCh
Confidence 889999999999999998764 489999999987
No 29
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=1.7e-44 Score=354.81 Aligned_cols=221 Identities=20% Similarity=0.308 Sum_probs=183.8
Q ss_pred CceEEEEEEEEEeeecCccccccCCCcccccccceeecCCC-eEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCc
Q psy16562 55 PLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADG-FERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREV 133 (445)
Q Consensus 55 p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG-~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~t 133 (445)
..+++|++..|... +| ..+.++++||++|||+|||++||+|+|+|+|+|+ +++
T Consensus 27 ~~~~~~~~~a~~~~-------------------------~~~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~-~~~ 80 (299)
T 3t9w_A 27 GTTRRITMYAEKIS-------------------------DELYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTD-RVL 80 (299)
T ss_dssp CCEEEEEEEEEEEE-------------------------TTEEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSS-SCB
T ss_pred CCEEEEEEEEEecC-------------------------CCceeeeecCCCCCccCceEEEECCeEEEEEEEECCC-CCc
Confidence 55788888888532 22 3456667799999999999999999999999998 899
Q ss_pred eEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC-------------CCcceEEecccc------hhhhcCceeE
Q psy16562 134 TLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM-------------PSGTFFYHSHVG------LQKMDGLEGS 194 (445)
Q Consensus 134 siHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~-------------~~GT~wYH~H~~------~q~~~Gl~G~ 194 (445)
||||||+++.. +|||++ ++||+|+||++|+|+|+++ ++||||||||.. .|+++||+|+
T Consensus 81 siH~HG~~~~~--~~DG~~-~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~ 157 (299)
T 3t9w_A 81 SLHPHGVDYDV--NSDGTL-MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGA 157 (299)
T ss_dssp CCEESSSBCCG--GGSCCT-TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEE
T ss_pred cEEeCCcccCC--ccCCCc-cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccce
Confidence 99999999864 799997 7999999999999999986 579999999963 4788999999
Q ss_pred EEEeCCCCCCCCCCccccCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecC
Q psy16562 195 MIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRD 274 (445)
Q Consensus 195 lIV~~~~~~~p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G 274 (445)
|||+++.... + | .|++|++++|. +||+..++ .+.++++.|
T Consensus 158 liV~~~~~~~-----~--d-~e~~l~~~~~~------------------------~Ng~~~~~--------~p~l~v~~G 197 (299)
T 3t9w_A 158 LVVRRQGDLL-----P--K-RQFTVVFNDMM------------------------INNRAHHD--------APTFEANLG 197 (299)
T ss_dssp EEEECTTCCC-----C--S-EEEEEEEETTE------------------------ETTCCTTC--------CCEEEEETT
T ss_pred EEEecccccC-----c--c-ccceeeeeeee------------------------ecCccccc--------cccceecCC
Confidence 9999874322 2 3 37999988764 56665433 257999999
Q ss_pred cEEEEEEEccCCCceeEEEEecccceEEEccCCCcce---eeEecEEEecCCceEEEEEecCC--CCceEEEEEEec
Q psy16562 275 KRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE---PLVVDSVTLFPGDRVDVIIHTNQ--SNNLYWMQAKTL 346 (445)
Q Consensus 275 ~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~---P~~~~~~~I~pGeR~dv~v~~~~--~~G~y~~~~~~~ 346 (445)
++|||||+|++... +.|+||||.|.++..|+.... +..++++.|.||||++++|.+.+ .||.|++|||..
T Consensus 198 e~Vr~~liN~~~~~--HpfHlHGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~ 272 (299)
T 3t9w_A 198 ERVEWIAIGHGSNF--HTFHLHGHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQ 272 (299)
T ss_dssp CEEEEEEEEESSCC--CEEEETTCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSH
T ss_pred CEEEEEEEeccccc--eeeeEecceEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCH
Confidence 99999999999764 678899999999988877653 34689999999999999987654 389999999987
No 30
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=9e-45 Score=358.23 Aligned_cols=219 Identities=17% Similarity=0.217 Sum_probs=162.8
Q ss_pred EEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCccc----CCCCCCCCCCccc--ccCCCCCCceEEEEec
Q psy16562 98 RAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQ----KVTPWMDGVPMVT--QCPIPSSTTFRYKFPA 171 (445)
Q Consensus 98 ~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~----~~~~~~DGvp~~t--q~pI~pG~~~~Y~f~~ 171 (445)
++.+++| ++|||+|+|++||+|+|+|+|.|+ ++++|||||++. .+.+++||++.++ ||+|+||++|+|+|++
T Consensus 49 ~~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~ 126 (306)
T 1sdd_A 49 KPQSRTS-GLLGPTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWII 126 (306)
T ss_dssp CCCCSSC-CSCCCCEEEETTCEEEEEEEECSS-SCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEEC
T ss_pred ccccccC-CccCCEEEEeCCCEEEEEEEECCC-CcccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEe
Confidence 3456789 699999999999999999999998 899999999994 4445555555554 7999999999999999
Q ss_pred CC----------CcceEEecccch--hhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEeeeeccCCCCccCCCCCC
Q psy16562 172 MP----------SGTFFYHSHVGL--QKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYN 239 (445)
Q Consensus 172 ~~----------~GT~wYH~H~~~--q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~ 239 (445)
++ +||||||||.+. |+.+||+|+|||+++...+....+.+.| .|++|+++||... .. +.
T Consensus 127 ~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d-~e~~l~~~d~d~~--~~-~~----- 197 (306)
T 1sdd_A 127 SEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFE-KQHVLMFAVFDES--KS-WN----- 197 (306)
T ss_dssp CGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSC-CCCCCBCCEEETT--SS-SS-----
T ss_pred CCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCccc-ceEEEEEEecccc--cc-cc-----
Confidence 64 389999999865 8899999999999875433333334454 3799999998532 11 11
Q ss_pred CCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEE
Q psy16562 240 DTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVT 319 (445)
Q Consensus 240 ~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~ 319 (445)
...++.++|||+.+.+ .|.|++++|++|||||+|++.....+.|++|||.|.+ || ..++++.
T Consensus 198 --~~~~~~~~ING~~~~~--------~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~ 259 (306)
T 1sdd_A 198 --QTSSLMYTVNGYVNGT--------MPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAIT 259 (306)
T ss_dssp --CCCCEEECSSSCCSSC--------CCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCC
T ss_pred --cCCCcceeeCCEecCC--------CcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEE
Confidence 1346789999997632 3578999999999999999975334568899999986 88 3479999
Q ss_pred ecCCceEEEEEecCCCCceEEEEEEec
Q psy16562 320 LFPGDRVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 320 I~pGeR~dv~v~~~~~~G~y~~~~~~~ 346 (445)
|.||||++++|++++ +|.|++|||..
T Consensus 260 l~pger~~v~~~~~~-pG~~~~hch~~ 285 (306)
T 1sdd_A 260 LVSATSTTANMTVSP-EGRWTIASLIP 285 (306)
T ss_dssp EETTCCBC---------CCCCCBCCST
T ss_pred ECCCcEEEEEEEcCC-CeEEEEEeCCh
Confidence 999999999999987 79999999976
No 31
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=1.2e-42 Score=375.87 Aligned_cols=224 Identities=17% Similarity=0.237 Sum_probs=168.7
Q ss_pred CCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCccc--------ccCCCCCCceEEEEecCC--
Q psy16562 104 NRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVT--------QCPIPSSTTFRYKFPAMP-- 173 (445)
Q Consensus 104 Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~t--------q~pI~pG~~~~Y~f~~~~-- 173 (445)
|+++|||+|+|++||+|+|+|+|.|+ ++++|||||+++.. +|||+|+++ ||+|+||++|+|+|++++
T Consensus 63 ~~~~pGP~I~~~~Gd~v~v~~~N~l~-~~~siH~HGl~~~~--~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~ 139 (647)
T 1sdd_B 63 HLGILGPVIRAEVDDVIQVRFKNLAS-RPYSLHAHGLSYEK--SSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRS 139 (647)
T ss_dssp GGTTSCCCEEEETTCEEEEEECCCSS-SCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTT
T ss_pred ccCCcCceEEEeCCCEEEEEEEECCC-CceEEecCcceeCC--CCCCccccCCCCcccccCcccCCCCeEEEEEECCccc
Confidence 56899999999999999999999998 89999999999964 799999887 999999999999999985
Q ss_pred ----Cc----ceEEeccc--chhhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEe------eeeccCCCCccCCCC
Q psy16562 174 ----SG----TFFYHSHV--GLQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVT------DWMHSMTDSKFPGNT 237 (445)
Q Consensus 174 ----~G----T~wYH~H~--~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~------D~~~~~~~~~~~~~~ 237 (445)
+| |||||||. ..|+.+||+|+|||+++........ .+.+..|++|+|+ ||+++..........
T Consensus 140 gp~~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~-~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~ 218 (647)
T 1sdd_B 140 GPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKETN-MPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRA 218 (647)
T ss_dssp SCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTTSC-CCSSCCEEEEEEEEEEGGGSSCCC----------
T ss_pred CCCCCCCCceEEEEccCCCCcccccccCccCEEEeeCCCcccccC-CCCcceeEEEEEEeecCccccccccCcccccccC
Confidence 58 99999998 4799999999999998754321111 1222248999999 666654322100111
Q ss_pred CCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecE
Q psy16562 238 YNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDS 317 (445)
Q Consensus 238 ~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~ 317 (445)
....+..++.++|||+.++ .+.|+|++|++|||||+|++.....+.|++|||.|+|++.|| ..+++
T Consensus 219 ~~~~~~~~~~~~iNG~~~~---------~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~ 284 (647)
T 1sdd_B 219 SSEVKNSHEFHAINGMIYN---------LPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGV 284 (647)
T ss_dssp -----CCCEEEEETTBSSC---------CCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESS
T ss_pred CcchhhcCceeccCCEecC---------CCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccce
Confidence 1112346789999999652 368999999999999999996533688999999999999987 46799
Q ss_pred EEecCCceEEEEEecCCCCceEEEEEEec
Q psy16562 318 VTLFPGDRVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 318 ~~I~pGeR~dv~v~~~~~~G~y~~~~~~~ 346 (445)
+.|.||||+|++|++++ +|.|++|||..
T Consensus 285 v~l~pg~r~~v~~~~~~-pG~w~~hch~~ 312 (647)
T 1sdd_B 285 WPLLPGSFKTLEMKASK-PGWWLLDTEVG 312 (647)
T ss_dssp EEECTTEEEEEEEECCS-SEEEEEECCCH
T ss_pred EEECCCeEEEEEEEecc-ceEeecccCcc
Confidence 99999999999999998 79999999987
No 32
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=3.4e-41 Score=337.34 Aligned_cols=237 Identities=22% Similarity=0.273 Sum_probs=187.9
Q ss_pred CCCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCe-EEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCC
Q psy16562 53 AKPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGF-ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDR 131 (445)
Q Consensus 53 ~~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~-~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~ 131 (445)
...++++|+|+++... +|. ...++.+||++|||+|+|++||+|+|+|+|.++ +
T Consensus 44 ~~g~~~~~~l~~~~~~-------------------------~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~-~ 97 (343)
T 3cg8_A 44 AGGEVRHLKMYAEKLA-------------------------DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMD-V 97 (343)
T ss_dssp -CCCEEEEEEEEEECG-------------------------GGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSS-S
T ss_pred CCCeEEEEEEEEEEcc-------------------------CCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCC-C
Confidence 3578899999998631 121 112223589999999999999999999999998 8
Q ss_pred CceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCC-------------CcceEEeccc------chhhhcCce
Q psy16562 132 EVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMP-------------SGTFFYHSHV------GLQKMDGLE 192 (445)
Q Consensus 132 ~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~-------------~GT~wYH~H~------~~q~~~Gl~ 192 (445)
+++|||||+++. .++||++ ++||+|+||++|+|+|++.+ +||||||||. ..|+.+||+
T Consensus 98 ~~sih~HG~~~~--~~~DG~~-~t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~ 174 (343)
T 3cg8_A 98 RASLHVHGLDYE--ISSDGTA-MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLY 174 (343)
T ss_dssp CBCCEESSSBCC--GGGSCCT-TTTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCE
T ss_pred CeeEEecCcccC--CcCCCcc-cccccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCe
Confidence 999999999987 3899999 89999999999999999864 4899999996 378999999
Q ss_pred eEEEEeCCCCCCCCCCccccCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEe
Q psy16562 193 GSMIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQ 272 (445)
Q Consensus 193 G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~ 272 (445)
|++||+++.... +| .|++|+++|| +|||+..+. .+.|+++
T Consensus 175 G~~iV~~~~~~~-----pd---~e~~l~~~d~------------------------~iNG~~~~~--------~~~l~v~ 214 (343)
T 3cg8_A 175 GPVIVRRKGDVL-----PD---ATHTIVFNDM------------------------TINNRKPHT--------GPDFEAT 214 (343)
T ss_dssp EEEEEECTTCCC-----CS---EEEEEEEETT------------------------EETTCCTTC--------CCCEEEE
T ss_pred EEEEEecCCCCC-----CC---ceEEEEcccc------------------------eecccCCCC--------CccEEeC
Confidence 999999874321 22 3788888775 689986532 3689999
Q ss_pred cCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcce----eeEecEEEecCCceEEEEEecC--CCCceEEEEEEec
Q psy16562 273 RDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE----PLVVDSVTLFPGDRVDVIIHTN--QSNNLYWMQAKTL 346 (445)
Q Consensus 273 ~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~----P~~~~~~~I~pGeR~dv~v~~~--~~~G~y~~~~~~~ 346 (445)
.|++|||||+|.+.. .+.|+||||.|.|++ ||.... +...+++.|.|||+++|+|+++ ..+|.|++|||..
T Consensus 215 ~Ge~vri~l~N~g~~--~HpfHlHGh~f~v~~-~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~HCHi~ 291 (343)
T 3cg8_A 215 VGDRVEIVMITHGEY--YHTFHMHGHRWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQ 291 (343)
T ss_dssp TTCEEEEEEEEESSC--CEEEEETTCCEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSH
T ss_pred CCCEEEEEEEcCCcc--ccccEecCcEEEEec-cCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEeCCCH
Confidence 999999999999975 578889999999874 564432 3567999999999999999974 3489999999987
Q ss_pred -CCCceeeEEEEEcCC
Q psy16562 347 -CDSITAEAVLQYEGE 361 (445)
Q Consensus 347 -~~~~~~~ail~y~~~ 361 (445)
.......+++++...
T Consensus 292 ~H~~~GM~g~~~V~~~ 307 (343)
T 3cg8_A 292 SHSDMGMVGLFLVKKP 307 (343)
T ss_dssp HHHHTTCEEEEEEECT
T ss_pred HHHhccCcEEEEEecC
Confidence 222223445555543
No 33
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1e-42 Score=379.23 Aligned_cols=226 Identities=18% Similarity=0.187 Sum_probs=172.1
Q ss_pred CeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCc--------ccccCCCCCCceE
Q psy16562 95 GFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM--------VTQCPIPSSTTFR 166 (445)
Q Consensus 95 G~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~--------~tq~pI~pG~~~~ 166 (445)
|+.++.|+ ++|||+|||++||+|+|+|+|+|+ +++||||||+++.. +|||+|+ +|||+|+||++|+
T Consensus 63 ~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~-~~tsIHwHGl~~~~--~~DG~p~~Dg~~~~~vtq~~I~PG~s~t 136 (742)
T 2r7e_A 63 AKPRPPWM---GLLGPTIQAEVYDTVVITLKNMAS-HPVSLHAVGVSYWK--ASEGAEYDDQTSQREKEDDKVFPGGSHT 136 (742)
T ss_dssp SSCSTTTT---TTSEEEEEECSEEEEECCEECCSS-SCCCCCCSSSCCCS--SSSCCCSSCSCCSSSSSSSSCCTTCEEC
T ss_pred Cccccccc---CCcCCeEEEECCCEEEEEEEECCC-CCEeEEecCcccCc--cccCCccCCCCcccccccCcCCCCCeEE
Confidence 44444453 899999999999999999999998 89999999999864 4566554 8999999999999
Q ss_pred EEEecC----------CCcceEEecccch--hhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEee------eeccC
Q psy16562 167 YKFPAM----------PSGTFFYHSHVGL--QKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTD------WMHSM 228 (445)
Q Consensus 167 Y~f~~~----------~~GT~wYH~H~~~--q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D------~~~~~ 228 (445)
|+|+++ ++||||||||.+. |+.+||+|+|||+++....+.. ..+..|++|++++ |++..
T Consensus 137 Y~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~---~~~~~e~~l~~~~~de~~~w~~~~ 213 (742)
T 2r7e_A 137 YVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEK---TQTLHKFILLFAVFDEGKSWHSET 213 (742)
T ss_dssp CEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTT---TTCCCEECCCEECCCCSSSSCCCC
T ss_pred EEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCccc---CceeeEEEEEeecccCCccccccc
Confidence 999984 4699999999865 8999999999999875433211 1122578888865 33332
Q ss_pred CCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCC
Q psy16562 229 TDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGT 308 (445)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~ 308 (445)
....+............+.++|||+... ..+.|++++|++|||||+|++.....+.|+||||.|+|++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~ING~~~~--------~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg~--- 282 (742)
T 2r7e_A 214 KNSLMQDRDAASARAWPKMHTVNGYVNR--------SLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNH--- 282 (742)
T ss_dssp CC-------CCSCCCCCCCCEETTBCTB--------CCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETTE---
T ss_pred cccccccCCCccccccCceEEECCccCC--------CCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEeE---
Confidence 2111110000111223567899999652 13578999999999999999975335778899999999852
Q ss_pred cceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec
Q psy16562 309 AVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 309 ~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~ 346 (445)
.++++.|.||+++++++.+++ +|.|++|||..
T Consensus 283 -----~~Dtv~v~Pg~~~~v~~~~~~-pG~w~~hCH~~ 314 (742)
T 2r7e_A 283 -----RQASLEISPITFLTAQTLLMD-LGQFLLFCHIS 314 (742)
T ss_dssp -----ECCSCCCCTTCCCEEEECCCS-CSEECCCCCSS
T ss_pred -----ecceEEeCCCcEEEEEEEeCC-CeeEEEEeCCh
Confidence 256778899999999999988 79999999987
No 34
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=1.4e-41 Score=370.91 Aligned_cols=269 Identities=14% Similarity=0.138 Sum_probs=197.6
Q ss_pred CCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeE--EEEE------EECC-----------CCCCCeEEE
Q psy16562 54 KPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFE--RAIL------SINR-----------QLPGPSIQV 114 (445)
Q Consensus 54 ~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~--~~~~------~~Ng-----------~~PGPtI~v 114 (445)
...+++|.+.++... + +|-.+........++...+|.. +-++ +|++ ++|||+|+|
T Consensus 130 ~g~~r~y~i~a~e~~--w----dyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~ 203 (770)
T 2r7e_B 130 QKKTRHYFIAAVERL--W----DYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRA 203 (770)
T ss_dssp CCCCEEEEEEEEECC--C----CCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCC
T ss_pred CCCEEEEEEEEEEEE--E----eecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEE
Confidence 467899999998742 2 2222221111123444555522 2222 2222 689999999
Q ss_pred EcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC----------CCcceEEecccc
Q psy16562 115 CKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM----------PSGTFFYHSHVG 184 (445)
Q Consensus 115 ~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~----------~~GT~wYH~H~~ 184 (445)
++||+|+|+|+|+|+ ++++|||||+++..+.. ||+++ +||+|+||++|+|+|+++ ++||||||||..
T Consensus 204 ~~GD~v~v~~~N~l~-~~~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~ 280 (770)
T 2r7e_B 204 EVEDNIMVTFRNQAS-RPYSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVD 280 (770)
T ss_dssp CSSSCEEEEEECCSS-SCCCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSS
T ss_pred EcCCEEEEEEEECCC-CCcceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCC
Confidence 999999999999998 89999999999988643 69998 999999999999999998 799999999987
Q ss_pred h--hhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEee------eeccCCCCccCCCCCC--C----CCCCCCeEEE
Q psy16562 185 L--QKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTD------WMHSMTDSKFPGNTYN--D----TRIKPDAILI 250 (445)
Q Consensus 185 ~--q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D------~~~~~~~~~~~~~~~~--~----~~~~~~~~lI 250 (445)
. |+.+||+|+|||+++....+....... ..|++|++++ |+++.....+...... . -......++|
T Consensus 281 ~~~q~~~GL~G~liV~~~~~~~~~~~~~~~-d~E~vl~~~~~de~~swy~~~~~~~~~~~p~~~~~~d~~~~~~~~~~~I 359 (770)
T 2r7e_B 281 LEKDVHSGLIGPLLVCHTNTLNPAHGRQVT-VQEFALFFTIFDETKSWYFTENMERNCRAPCNIQMEDPTFKENYRFHAI 359 (770)
T ss_dssp SSHHHHTSCCEEEEEECSTTSCSSSCCCCS-SEEEECCCCEECCSSSSCTTGGGSSCSCCSSCCCSSSSSSTTTSCEECT
T ss_pred cHHHHhCCceeeEEECCCcccccccCCCcc-ceEEEEEEeecCccccchhccchhhcccCccccccCCccccccCCcccc
Confidence 5 899999999999987543321111112 2478888754 4444332212111000 0 0112456899
Q ss_pred ccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEE
Q psy16562 251 NGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVII 330 (445)
Q Consensus 251 NG~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v 330 (445)
||+...+ .+.+++++|++|||||+|++.....+.|+||||.|+|++.||. .++++.|.||||++++|
T Consensus 360 NG~~~~~--------~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~ 426 (770)
T 2r7e_B 360 NGYIMDT--------LPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEM 426 (770)
T ss_dssp TSCTTTT--------CCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEE
T ss_pred CCccCCC--------CCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEE
Confidence 9996532 3578999999999999999865346789999999999999983 68999999999999999
Q ss_pred ecCCCCceEEEEEEec
Q psy16562 331 HTNQSNNLYWMQAKTL 346 (445)
Q Consensus 331 ~~~~~~G~y~~~~~~~ 346 (445)
++++ +|.|.+|||..
T Consensus 427 ~ad~-pG~w~~hcH~~ 441 (770)
T 2r7e_B 427 LPSK-AGIWRVECLIG 441 (770)
T ss_dssp CCSS-CBCCCBCCCSH
T ss_pred EeCC-CCceEEEeccc
Confidence 9988 79999999977
No 35
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.2e-41 Score=352.78 Aligned_cols=308 Identities=15% Similarity=0.135 Sum_probs=207.2
Q ss_pred EEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcce
Q psy16562 98 RAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTF 177 (445)
Q Consensus 98 ~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~ 177 (445)
..+++|||++ ||+|+|++||+|+|+|+|.+. ..+++||||.. ..+||+|+||++++|.|++.++|||
T Consensus 44 g~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~-~~h~~~~~g~~-----------~~~~~~i~pG~~~~~~f~~~~~Gt~ 110 (447)
T 2dv6_A 44 GVGGDIDHKI-NPTLVVHEGETVQVNLVNGEG-AQHDVVVDQYA-----------ARSAIVNGKNASSTFSFVASKVGEF 110 (447)
T ss_dssp EESGGGTTCB-SCCEEEETTCEEEEEEECSSS-SCBCCEETTTT-----------EECCCBCSTTBEEEEEEECCSCEEE
T ss_pred ccceeecCCc-CCeEEEcCCCEEEEEEEcCCC-CceEEEEccCC-----------cccceecCCCCeEEEEEEcCCCEEE
Confidence 3456899999 999999999999999999997 56899999863 2378999999999999999999999
Q ss_pred EEecccchhhhcCceeEEEEeCCCCCCCCCCccc---cCCcceEEEEeeeeccCCCC-ccC---CCCCCCCCCCCCeEEE
Q psy16562 178 FYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYD---FDLYSHVIIVTDWMHSMTDS-KFP---GNTYNDTRIKPDAILI 250 (445)
Q Consensus 178 wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d---~d~~e~~l~l~D~~~~~~~~-~~~---~~~~~~~~~~~~~~lI 250 (445)
|||||...|+.+||+|.|+|+++........ ++ .+..+++..+ |+....... .+. .......+...+.++|
T Consensus 111 ~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~-~~~~~~~~~~~p~~~-d~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ 188 (447)
T 2dv6_A 111 NYYCSIAGHRQAGMEGNIQVLPGNRAEMKSS-GADITRDPADLPGPI-GPRQAKTVRIDLETVEVKGQLDDNTTYTYWTF 188 (447)
T ss_dssp EEECCSTTHHHHTCEEEEEEESSCCCCCCCS-SBCCBCCTTCSCCCC-CSCCCCEEEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred EEEeCCCChhhCCCEEEEEEeCCccccCCCc-chhhccChhhcCCcc-ccCCCcEEEEEEEEEEEEEeccCCceeEEEEE
Confidence 9999998999999999999998754321100 00 0000010000 110000000 000 0000012334578999
Q ss_pred ccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEE
Q psy16562 251 NGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVII 330 (445)
Q Consensus 251 NG~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v 330 (445)
||+ .++|+|++++|++||||++|.+... ..++||+|++ ++.||.+ +.+.|.||||++|+|
T Consensus 189 NG~----------~pgp~i~v~~G~~v~~rl~N~~~~~--~~~~ih~Hg~--~~~DG~~------~~~~i~pG~~~~~~~ 248 (447)
T 2dv6_A 189 NGK----------VPGPFLRVRVGDTVELHLKNHKDSL--MVHSVDFHGA--TGPGGAA------AFTQTDPGEETVVTF 248 (447)
T ss_dssp TTB----------BSCCCEEEETTCEEEEEEEECTTCS--SCBCCEETTC--CSGGGGG------GGCCBCTTCEEEEEE
T ss_pred CCc----------cCCCeEEecCCCEEEEEEEeCCCCc--eeEEEeeccc--cCCCCCC------ccEEeCCCCEEEEEE
Confidence 998 4568999999999999999998532 2334666765 3679974 223599999999999
Q ss_pred ecCCCCceEEEEEEec------CCCceeeEEEEEcCCCCCCCCC-----------CC-CCC-----C-----CCCC--C-
Q psy16562 331 HTNQSNNLYWMQAKTL------CDSITAEAVLQYEGEKLTYVSK-----------RP-KSD-----S-----FPRG--K- 379 (445)
Q Consensus 331 ~~~~~~G~y~~~~~~~------~~~~~~~ail~y~~~~~~~~~~-----------~P-~~~-----~-----~~~~--~- 379 (445)
++++ +|+||||+|.. ..++.+ .|.+.+....+... .+ ... . +... .
T Consensus 249 ~~~~-~G~~~yh~h~~~~~~~~~~Gl~g--~l~v~~~~~~P~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 325 (447)
T 2dv6_A 249 KALI-PGIYVYHCATPSVPTHITNGMYG--LLLVEPEGGLPQVDREFYVMQGEIYTVKSFGTSGEQEMDYEKLINEKPEY 325 (447)
T ss_dssp ECCS-CEEEEEECCSSSHHHHHHTTCEE--EEEEECTTCSCCCSEEEEEEEEEECBSSCTTCCEECCBBHHHHHTTCCSE
T ss_pred ECCC-CeEEEEEeCCCChHHHHhCCCEE--EEEEeCCCCCCCCCeeEEEEecccccCCcccccccccCChHHhhccCCCE
Confidence 9987 69999999863 244443 44444332111000 00 000 0 0000 0
Q ss_pred CCCCCCCCcc---ceeEeeCCcEEEEEEEcCCC-CccceEEEEeCeeEEEEecCCccCCC-e-EEeEEEecC
Q psy16562 380 PKDNSPRVPM---HFFKVQRDKRYLMRIIGGSC-LACPLIFTIEKHQLQVIASDGTAVEP-L-VVDSVTLFP 445 (445)
Q Consensus 380 ~~~~~~~~~~---~~~~v~~G~~~~~rliN~s~-~~Hp~~~hihgh~f~Vi~~dG~~~~p-~-~~Dtv~v~p 445 (445)
-..|+...+. ..+++++|+++||||+|++. ..||| |||||+|+||+.||.++.| . ++|+|.|.|
T Consensus 326 ~~iNG~~~~~~~~~~~~v~~g~~vrlrliN~~~~~~h~~--hlhGh~f~vv~~dG~~~~~p~~~~dtv~l~p 395 (447)
T 2dv6_A 326 FLFNGSVGSLTRSHPLYASVGETVRIFFGVGGPNFTSSF--HVIGEIFDHVYSLGSVVSPPLIGVQTVSVPP 395 (447)
T ss_dssp EEETTSTTCCCCCCCEEECTTCEEEEEEEEEESSCCEEE--EEETCCEEEECGGGCSSSCCEEEESEEEECT
T ss_pred EEECCcccCCCCCcceEECCCCEEEEEEEeCCCCceEeE--EEcCcEEEEEEcCCcccCCCcccccEEEECC
Confidence 0123332221 25889999999999999974 45665 9999999999999998874 4 699999976
No 36
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=3.4e-39 Score=334.50 Aligned_cols=248 Identities=20% Similarity=0.230 Sum_probs=199.7
Q ss_pred CCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCC-CCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEec
Q psy16562 93 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMI-DREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPA 171 (445)
Q Consensus 93 ~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~-~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~ 171 (445)
.+|..+.+|+|||++|||+|+|++||+++|+|+|.+. ...++|||||+. .+||+|..+| |.||++++|.|++
T Consensus 178 ~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~-----~~DG~~~~~~--i~pG~~~~~~~~~ 250 (447)
T 2dv6_A 178 DDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT-----GPGGAAAFTQ--TDPGEETVVTFKA 250 (447)
T ss_dssp ETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGGGGCC--BCTTCEEEEEEEC
T ss_pred cCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeecccc-----CCCCCCccEE--eCCCCEEEEEEEC
Confidence 3688899999999999999999999999999999986 357999999985 3799987664 9999999999999
Q ss_pred CCCcceEEecccc---hhhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEeeeeccCCCCcc---CCCCCCCCCCCC
Q psy16562 172 MPSGTFFYHSHVG---LQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKF---PGNTYNDTRIKP 245 (445)
Q Consensus 172 ~~~GT~wYH~H~~---~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D~~~~~~~~~~---~~~~~~~~~~~~ 245 (445)
+++||||||||.. .|..+||+|+|+|+++.. .| .+ | .|++++++||++....... ........+..+
T Consensus 251 ~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~-~P---~~--d-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 323 (447)
T 2dv6_A 251 LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG-LP---QV--D-REFYVMQGEIYTVKSFGTSGEQEMDYEKLINEKP 323 (447)
T ss_dssp CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC-SC---CC--S-EEEEEEEEEECBSSCTTCCEECCBBHHHHHTTCC
T ss_pred CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC-CC---CC--C-eeEEEEecccccCCcccccccccCChHHhhccCC
Confidence 9999999999963 788999999999987632 12 23 3 2688999999875331100 000000112357
Q ss_pred CeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCccee-e-EecEEEecCC
Q psy16562 246 DAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEP-L-VVDSVTLFPG 323 (445)
Q Consensus 246 ~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P-~-~~~~~~I~pG 323 (445)
+.++|||+.++.. +.+.+++++|++|||||+|++.. ..+.|+||||.|+||+.||.+++| . ..+++.|.||
T Consensus 324 ~~~~iNG~~~~~~------~~~~~~v~~g~~vrlrliN~~~~-~~h~~hlhGh~f~vv~~dG~~~~~p~~~~dtv~l~pg 396 (447)
T 2dv6_A 324 EYFLFNGSVGSLT------RSHPLYASVGETVRIFFGVGGPN-FTSSFHVIGEIFDHVYSLGSVVSPPLIGVQTVSVPPG 396 (447)
T ss_dssp SEEEETTSTTCCC------CCCCEEECTTCEEEEEEEEEESS-CCEEEEEETCCEEEECGGGCSSSCCEEEESEEEECTT
T ss_pred CEEEECCcccCCC------CCcceEECCCCEEEEEEEeCCCC-ceEeEEEcCcEEEEEEcCCcccCCCcccccEEEECCC
Confidence 8899999977531 12479999999999999999865 368899999999999999999874 4 5899999999
Q ss_pred ceEEEEEecCCCCceEEEEEEec-CCCceeeEEEEEcCCC
Q psy16562 324 DRVDVIIHTNQSNNLYWMQAKTL-CDSITAEAVLQYEGEK 362 (445)
Q Consensus 324 eR~dv~v~~~~~~G~y~~~~~~~-~~~~~~~ail~y~~~~ 362 (445)
||++++|++++ +|.|++|||.. .......++++|.+..
T Consensus 397 ~r~~i~~~~~~-pG~~~~hch~~~h~~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 397 GATIVDFKIDR-AGRYILVDHALSRLEHGLVGFLNVDGPK 435 (447)
T ss_dssp EEEEEEEECCS-CEEEEEEESSGGGGGGTCCEEEEECSCS
T ss_pred cEEEEEEECCC-CEEEEEEecCcCccccCCEEEEEEeCCC
Confidence 99999999997 79999999987 3334457899998764
No 37
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=2.1e-39 Score=366.41 Aligned_cols=320 Identities=11% Similarity=0.096 Sum_probs=225.4
Q ss_pred eEEEEEEECCCCCC--CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCC-CCCCCCCCcccccCCCCCCceEEEEecC
Q psy16562 96 FERAILSINRQLPG--PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKV-TPWMDGVPMVTQCPIPSSTTFRYKFPAM 172 (445)
Q Consensus 96 ~~~~~~~~Ng~~PG--PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~-~~~~DGvp~~tq~pI~pG~~~~Y~f~~~ 172 (445)
..+.+.++||++|| |+|++|+||+|+|+|.|. .+.+||||++|.+ ++++||++.+| |+|.||.+++|+|.+.
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~----g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA----GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWPD 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC----CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECCC
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC----CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEecC
Confidence 57899999999999 889999999999999965 4569999999998 99999999999 9999999999999999
Q ss_pred CCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEE----eeeeccCCCCccCCCCCCCCCCCCCeE
Q psy16562 173 PSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIV----TDWMHSMTDSKFPGNTYNDTRIKPDAI 248 (445)
Q Consensus 173 ~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l----~D~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (445)
++||||||||++.|+.+||.|+++|+++...+ ...+++|. |++++| +||++............ ..+..+..+
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~--~~~~~yd~-e~~~~iaa~~~dW~~~~~~~~~~~~~~-~~~~~p~~~ 766 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQS--EDSTFYLG-ERTYYIAAVEVEWDYSPQREWEKELHH-LQEQNVSNA 766 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCC--SCCCCCSE-EEEEEEEEEEEEEESCSCCHHHHHHHH-HHTCCCCCT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCcccc--CCccCCCc-ceEEEEeeeeccccCCcchhhhhhccC-CCccCccce
Confidence 99999999999999999999999999874322 22466764 899999 89999766531100000 000012222
Q ss_pred EEccccC-------------CCCCC-C-----------CCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEE
Q psy16562 249 LINGQNQ-------------NPKDN-S-----------PRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI 303 (445)
Q Consensus 249 lING~~~-------------~~~~~-~-----------~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~vi 303 (445)
++|+... +.+.+ + ...++|+|++++|+++++|++|.+.. .++||+|++.+.
T Consensus 767 ~~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~~----~~sih~HGl~~~ 842 (1065)
T 2j5w_A 767 FLDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMATR----PYSIHAHGVQTE 842 (1065)
T ss_dssp TTCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSSS----CBCCEESSCBCS
T ss_pred eecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCCC----CceEeecccccc
Confidence 2232110 00000 1 24678999999999999999999764 344788888776
Q ss_pred ccCCCcceeeEecEEEecCCceEEEEEecCCC---------CceEEEEEEec-----CCCceeeEEEEEcCCCCCC--CC
Q psy16562 304 ASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQS---------NNLYWMQAKTL-----CDSITAEAVLQYEGEKLTY--VS 367 (445)
Q Consensus 304 a~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~---------~G~y~~~~~~~-----~~~~~~~ail~y~~~~~~~--~~ 367 (445)
..+ ...|.||+++++.+.+.+. +|+||||+|.. ..++.+..++...+..... +.
T Consensus 843 ~~~----------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q~~~GL~G~liV~~~~~l~~~~~~~ 912 (1065)
T 2j5w_A 843 SST----------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYLKVFNPRR 912 (1065)
T ss_dssp CSC----------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEECCC-----CCCC
T ss_pred CCC----------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHhhhccccceeEecCcccccccCCCc
Confidence 542 2357899999999987653 26999999865 3566655454433211000 00
Q ss_pred ---------------------------CCCCCCCCCC------C-CCCCCCCCCc-cceeEeeCCcEEEEEEEcCC--CC
Q psy16562 368 ---------------------------KRPKSDSFPR------G-KPKDNSPRVP-MHFFKVQRDKRYLMRIIGGS--CL 410 (445)
Q Consensus 368 ---------------------------~~P~~~~~~~------~-~~~~~~~~~~-~~~~~v~~G~~~~~rliN~s--~~ 410 (445)
..|....+.. . .-..|+..+. ...+.++.|+++||+|+|.+ .+
T Consensus 913 d~D~~l~~~~~d~~~~~y~~~n~~~~~~~P~~v~~~~~~~~~~~~~~~iNG~~~~~~~~~~v~~G~~vr~~l~N~g~~~~ 992 (1065)
T 2j5w_A 913 KLEFALLFLVFDENESWYLDDNIKTYSDHPEKVNKDDEEFIESNKMHAINGRMFGNLQGLTMHVGDEVNWYLMGMGNEID 992 (1065)
T ss_dssp EEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCCTTCHHHHHHTEEEEETTBCTTCCCCCEEETTCEEEEEEEECCSTTC
T ss_pred ceEEEEEEEeecCCcceeeccCcccccCCccccCcchhhhhccCceEEECCccCCCCccEEeCCCCEEEEEEEeCCCCCc
Confidence 0000000000 0 0011222211 22578999999999999985 46
Q ss_pred ccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 411 ACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 411 ~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
.||| |||||+|+|++.+ |.++|||.|.|
T Consensus 993 ~Hpf--HlHG~~F~vv~~~-----p~~~DTv~v~p 1020 (1065)
T 2j5w_A 993 LHTV--HFHGHSFQYKHRG-----VYSSDVFDIFP 1020 (1065)
T ss_dssp CEEE--EESSCCEEETTTT-----CEEESEEEECT
T ss_pred ceeE--EEcccEEEEEecC-----CceeeEEEECC
Confidence 7887 9999999999875 88999999976
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=3.4e-39 Score=351.57 Aligned_cols=222 Identities=21% Similarity=0.262 Sum_probs=171.8
Q ss_pred CCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCC-----CCCcccccCCCCCCceEEEEecCC-Cc--
Q psy16562 104 NRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMD-----GVPMVTQCPIPSSTTFRYKFPAMP-SG-- 175 (445)
Q Consensus 104 Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~D-----Gvp~~tq~pI~pG~~~~Y~f~~~~-~G-- 175 (445)
...+|||+|||++||+|+|+|+|+|+ +++||||||+++. ++|+| |+++++||+|+||++|+|+|++++ +|
T Consensus 446 ~~g~pGP~Ir~~~GD~v~v~~~N~l~-~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg 523 (742)
T 2r7e_A 446 ESGILGPLLYGEVGDTLLIIFKNQAS-RPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPT 523 (742)
T ss_dssp SSCSCCCCCCCBTTCEEECCEECCSS-SCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCC
T ss_pred ccCCCCCeEEEECCCEEEEEEEeCCC-CCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCc
Confidence 34689999999999999999999998 8999999999985 45776 567789999999999999999974 43
Q ss_pred -------ceEEecccc--hhhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEeee------eccCCCCccCCCCCCC
Q psy16562 176 -------TFFYHSHVG--LQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTDW------MHSMTDSKFPGNTYND 240 (445)
Q Consensus 176 -------T~wYH~H~~--~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D~------~~~~~~~~~~~~~~~~ 240 (445)
|||||||.. .|+++||+|+|||+++...++...+++.|. |++|++++| ++......+.......
T Consensus 524 ~~d~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~-E~~l~~~~fde~~~wy~~~~~~~~~~~p~~v 602 (742)
T 2r7e_A 524 KSDPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDK-RNVILFSVFDENRSWYLTENIQRFLPNPAGV 602 (742)
T ss_dssp SSSCSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSC-CCEEEECBCCGGGSSCSHHHHHHHSSSSSCS
T ss_pred ccCCCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCc-eEEEEeeccccccccccccchhhcccCchhc
Confidence 999999985 468999999999998755444444455654 899999754 3321111111000000
Q ss_pred --CC----CCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeE
Q psy16562 241 --TR----IKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLV 314 (445)
Q Consensus 241 --~~----~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~ 314 (445)
.. .....++|||+.+.+ .+ +.+++|++|||||+|++.....+.|+||||.|+|+ +..
T Consensus 603 ~~~~~~~~~~~~~~~ING~~~~~--------~~-l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~ 665 (742)
T 2r7e_A 603 QLEDPEFQASNIMHSINGYVFDS--------LQ-LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVY 665 (742)
T ss_dssp CCCCHHHHGGGCCBCTTTTCSSC--------CC-CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSS
T ss_pred ccccccccccCceeeecCcCCCC--------Cc-EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------ccc
Confidence 00 011347899997532 13 89999999999999988643356788999999987 356
Q ss_pred ecEEEecCCceEEEEEecCCCCceEEEEEEec
Q psy16562 315 VDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 315 ~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~ 346 (445)
++++.|.||||++++|++++ +|.|++|||..
T Consensus 666 ~Dtv~l~Pg~~~~v~~~ad~-pG~w~~hcH~~ 696 (742)
T 2r7e_A 666 EDTLTLFPFSGETVFMSMEN-PGLWILGCHNS 696 (742)
T ss_dssp BCSSCCCCCSSEECCEECCC-CCCSCCEECCC
T ss_pred eeEEEECCCcEEEEEEEcCC-CeEEEEEeCCc
Confidence 78999999999999999987 79999999987
No 39
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.90 E-value=1.5e-24 Score=216.54 Aligned_cols=179 Identities=18% Similarity=0.256 Sum_probs=132.3
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEcc---CCCcceeeEecEEEe
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIAS---DGTAVEPLVVDSVTL 320 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~---DG~~v~P~~~~~~~I 320 (445)
....+++||+ .|+|+|+|++|+++|+||+|.+.. .++||+|++.+.+. ||++. ++++.|
T Consensus 22 ~~~~~~~NG~----------~pGP~I~v~~Gd~v~v~v~N~l~~----~~siH~HG~~~~~~~~~DGvp~----vtq~~I 83 (339)
T 2zwn_A 22 DYKVFGFNGQ----------VPGPLIHVQEGDDVIVNVTNNTSL----PHTIHWHGVHQKGTWRSDGVPG----VTQQPI 83 (339)
T ss_dssp EEEEEEETTB----------SSCCEEEEETTCEEEEEEEEESSS----CBCCEEETCCCTTCGGGSCCBT----TTBCCB
T ss_pred EEEEEEECCc----------cCCCeEEEECCCEEEEEEEECCCC----CccEEeCCCCcCCCcccCCCCc----cccCcc
Confidence 4578999998 678999999999999999999864 34699999999885 99753 578899
Q ss_pred cCCceEEEEEecCCCCceEEEEEEec-----C-CCceeeEEEEEcCCCCCCCCCCCCCC--C-----------CCC--CC
Q psy16562 321 FPGDRVDVIIHTNQSNNLYWMQAKTL-----C-DSITAEAVLQYEGEKLTYVSKRPKSD--S-----------FPR--GK 379 (445)
Q Consensus 321 ~pGeR~dv~v~~~~~~G~y~~~~~~~-----~-~~~~~~ail~y~~~~~~~~~~~P~~~--~-----------~~~--~~ 379 (445)
.|||||+|.|++++ +|+||||+|.. . .++.+..++.-......+. ..+.+ . ... +.
T Consensus 84 ~PG~~~~y~f~~~~-~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~--~~d~e~~l~l~d~~~~~~~~~~~~g~ 160 (339)
T 2zwn_A 84 EAGDSYTYKFKADR-IGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIEK--RVTKDVIMMMSTWESAVADKYGEGGT 160 (339)
T ss_dssp CTTCEEEEEEECCS-CEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTGG--GCSEEEEEEEEEECGGGTTCTTCCCS
T ss_pred CCCCeEEEEEECCC-CEEEEEEecCCchhhhhcCCceEeEEecCCCcccccc--cCCceEEEEeeheecccccccCCCCC
Confidence 99999999999986 89999999975 3 5666665554322111000 00000 0 000 00
Q ss_pred -------CCCCCCCCc-cceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCC-CeEEeEEEecC
Q psy16562 380 -------PKDNSPRVP-MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE-PLVVDSVTLFP 445 (445)
Q Consensus 380 -------~~~~~~~~~-~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~-p~~~Dtv~v~p 445 (445)
-..|+...+ ...+++++|+++||||+|++...||| |||||.|+||+.||.+++ |.++|++.|.|
T Consensus 161 ~~~~~~~~~ING~~~~~~~~~~v~~G~~vrlrliN~~~~~h~~--hlhGh~f~vi~~DG~~~~~p~~~dtv~l~p 233 (339)
T 2zwn_A 161 PMNVADYFSVNAKSFPLTQPLRVKKGDVVKIRFFGAGGGIHAM--HSHGHDMLVTHKDGLPLDSPYYADTVLVSP 233 (339)
T ss_dssp TTSCCCEEEETTBCTTSSCCEEECTTCEEEEEEEECSSSCEEE--EETTCCEEEEEETTEEEEEEEEESEEEECT
T ss_pred CccccceEEEccccCCCcccEEECCCCEEEEEEEeCCCceEEE--EECCcEEEEEEeCCeecCCCcEEEEEEECC
Confidence 012222222 12488999999999999999776665 999999999999999987 88999999976
No 40
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.88 E-value=1.2e-22 Score=212.14 Aligned_cols=188 Identities=21% Similarity=0.353 Sum_probs=139.0
Q ss_pred CCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCc-eeEEEEecccceEEE---ccCCCcceeeEecEE
Q psy16562 243 IKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLA-CPLIFTIEKHQLQVI---ASDGTAVEPLVVDSV 318 (445)
Q Consensus 243 ~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~-~~~~~~i~gh~~~vi---a~DG~~v~P~~~~~~ 318 (445)
.....++|||+ .|+|+|++++|+++++++.|..... .....+||||++.+. ..||. ..++++
T Consensus 20 ~~~~~~~~NG~----------~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv----~~vtq~ 85 (499)
T 3pxl_A 20 FSRQAVVVNGV----------TPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGP----AFINQC 85 (499)
T ss_dssp CCEEEEEETTB----------SSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCC----BTTTBC
T ss_pred cEEEEEEECCc----------ccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCC----CccccC
Confidence 45678999998 8899999999999999999998641 012456899999884 46994 346889
Q ss_pred EecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCCCCC---------CC--------------
Q psy16562 319 TLFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVSKRP---------KS-------------- 372 (445)
Q Consensus 319 ~I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~~~P---------~~-------------- 372 (445)
.|.||++|+|.|++++++|+||||+|.. ++++.+..||+-........-... ++
T Consensus 86 pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~~~~~p~~ 165 (499)
T 3pxl_A 86 PISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKLGPRFPGG 165 (499)
T ss_dssp CBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTTSCSSCSS
T ss_pred CCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCccccccCCCCC
Confidence 9999999999999966689999999986 578888766653322110000000 00
Q ss_pred -C-CCCCCC-CCCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 373 -D-SFPRGK-PKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 373 -~-~~~~~~-~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
+ .+.++. ...+........++|++|++|||||||++... .+.|+|+||.|+||+.||.+++|..+|+|.|+|
T Consensus 166 ~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~-~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~p 240 (499)
T 3pxl_A 166 ADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNP-NHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFA 240 (499)
T ss_dssp CSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSC-CEEEEETTBCEEEEEETTEEEEEEEESBEEECT
T ss_pred CcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCe-eEEEEECCCeEEEEEECCcccCceEeeeEEECC
Confidence 0 001111 11111112345789999999999999999876 688999999999999999999999999999976
No 41
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.88 E-value=1.6e-22 Score=211.14 Aligned_cols=188 Identities=19% Similarity=0.309 Sum_probs=139.0
Q ss_pred CCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCc-eeEEEEecccceEEE---ccCCCcceeeEecEE
Q psy16562 243 IKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLA-CPLIFTIEKHQLQVI---ASDGTAVEPLVVDSV 318 (445)
Q Consensus 243 ~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~-~~~~~~i~gh~~~vi---a~DG~~v~P~~~~~~ 318 (445)
.....++|||+ .|+|+|++++|+++++++.|..... .....+||||++.+. ..||.+ .++++
T Consensus 21 ~~~~~~~~NG~----------~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~----~vtq~ 86 (495)
T 3t6v_A 21 FVRPAVNAGGT----------FPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPA----FITQC 86 (495)
T ss_dssp CCEEEEEETTS----------SSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCB----TTTBC
T ss_pred ceEEEEEECCc----------ccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCC----ccccC
Confidence 45578999998 8899999999999999999998641 012456999999885 469943 36889
Q ss_pred EecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCC------------------------CCC-
Q psy16562 319 TLFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVS------------------------KRP- 370 (445)
Q Consensus 319 ~I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~------------------------~~P- 370 (445)
.|.||++|+|.|++++++|+||||+|.. ++++.+..|++-......... ..|
T Consensus 87 pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~~~~p~ 166 (495)
T 3t6v_A 87 PIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEMGAGGAI 166 (495)
T ss_dssp CBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGSCSSSCC
T ss_pred CCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhhccCCCC
Confidence 9999999999999966689999999986 578888766653322110000 000
Q ss_pred CCC-CCCCCCC-CCCCC-CCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 371 KSD-SFPRGKP-KDNSP-RVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 371 ~~~-~~~~~~~-~~~~~-~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
..+ .+.++.. ..+.+ ..+...++|++|++|||||||++... .+.|+|+||.|+||+.||.+++|..+|+|.|+|
T Consensus 167 ~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~-~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~p 243 (495)
T 3t6v_A 167 TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDP-NYDFSIDGHDMTIIETDGVDSQELTVDEIQIFA 243 (495)
T ss_dssp CCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSC-CEEEEETTCCEEEEEETTEEEEEEEESBEEECT
T ss_pred CCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCe-eEEEEECCCeEEEEEeCCcccCCEEeeeEEEcC
Confidence 000 0011111 01111 12345789999999999999998876 688999999999999999999999999999976
No 42
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.88 E-value=2e-22 Score=213.37 Aligned_cols=184 Identities=18% Similarity=0.241 Sum_probs=138.7
Q ss_pred CCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEE---ccCCCcceeeEecEEE
Q psy16562 243 IKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI---ASDGTAVEPLVVDSVT 319 (445)
Q Consensus 243 ~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~vi---a~DG~~v~P~~~~~~~ 319 (445)
.....++|||+ .|+|+|++++||+++++|.|..... ..+||||++.+. ..||. ..+++++
T Consensus 84 ~~~~~~~~NG~----------~PGP~I~~~~GD~v~V~v~N~l~~~---~tsIHwHGl~~~~t~~~DGv----p~vTq~p 146 (580)
T 3sqr_A 84 YTRSAMTFNGT----------VPGPAIIADWGDNLIIHVTNNLEHN---GTSIHWHGIRQLGSLEYDGV----PGVTQCP 146 (580)
T ss_dssp BCEEEEEETTB----------SSCCCEEEETTCEEEEEEEECCSSC---CBCEEETTCCCTTCGGGSCC----BTTTBCC
T ss_pred eEEEEEEECCc----------cCCceEEEeCCCEEEEEEEECCCCC---cceEEecccccCCCccccCC----CccccCC
Confidence 35678999999 8899999999999999999999631 345899999985 56995 3468999
Q ss_pred ecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCC------------------------CCCCCCC
Q psy16562 320 LFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTY------------------------VSKRPKS 372 (445)
Q Consensus 320 I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~------------------------~~~~P~~ 372 (445)
|.||++|+|.|+++| +|+||||+|.. ++++.+..||+-....... ....+..
T Consensus 147 I~PG~sftY~f~~~q-~GT~WYHsH~~~q~~~GL~G~lIV~~p~~~~yD~d~~~l~l~Dw~~~~~~~~~~~~~~~~~~~~ 225 (580)
T 3sqr_A 147 IAPGDTLTYKFQVTQ-YGTTWYHSHFSLQYGDGLFGPLIINGPATADYDEDVGVIFLQDWAHESVFEIWDTARLGAPPAL 225 (580)
T ss_dssp BCTTCEEEEEEECCC-CEEEEEEECSTTGGGGTCEEEEEEECCCSSCCSEEEEEEEEEEECSSCHHHHHHHHTTSCCCCB
T ss_pred CCCCCeEEEEEECCC-CcceEEeecccccccCcCEEEEEeeCcccCCCCccceEEEEEEEecCCHHHHHHHHhccCCCCC
Confidence 999999999999987 79999999986 5778887666532211100 0001111
Q ss_pred C-CCCCCCCC-CCC--------CCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEE
Q psy16562 373 D-SFPRGKPK-DNS--------PRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVT 442 (445)
Q Consensus 373 ~-~~~~~~~~-~~~--------~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~ 442 (445)
+ .+.++... .+. .......++|++|++|||||||++... .+.|+|+||.|+||+.||.+++|..+|+|.
T Consensus 226 d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~-~~~~~i~gh~~~VIa~DG~~v~P~~~~~l~ 304 (580)
T 3sqr_A 226 ENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDS-HFEFAIDNHTLTVIANDLVPIVPYTTDTLL 304 (580)
T ss_dssp SEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSC-CEEEEETTCCEEEEEETTEEEEEEEESSEE
T ss_pred ceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCc-eeeEEeCCceEEEEEeCCccCCceEeeEEE
Confidence 1 11222211 100 111234789999999999999999887 688999999999999999999999999999
Q ss_pred ecC
Q psy16562 443 LFP 445 (445)
Q Consensus 443 v~p 445 (445)
|.|
T Consensus 305 i~p 307 (580)
T 3sqr_A 305 IGI 307 (580)
T ss_dssp ECT
T ss_pred Ecc
Confidence 876
No 43
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.87 E-value=5.2e-22 Score=196.39 Aligned_cols=180 Identities=18% Similarity=0.240 Sum_probs=129.5
Q ss_pred CCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEE---ccCCCcceeeEecEEEec
Q psy16562 245 PDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI---ASDGTAVEPLVVDSVTLF 321 (445)
Q Consensus 245 ~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~vi---a~DG~~v~P~~~~~~~I~ 321 (445)
...+++||+ .|+|+|++++|+++++|+.|.+... .+||+|++.+. +.||.+. ++++.|.
T Consensus 22 ~~~~~~ng~----------~pGP~i~~~~Gd~v~v~~~N~l~~~----~siH~HG~~~~~~~~~DG~p~----~t~~~i~ 83 (318)
T 3g5w_A 22 FHTFAFNGQ----------VPAPLIHVMEGDDVTVNVTNMTTLP----HTIHWHGMLQRGTWQSDGVPH----ATQHAIE 83 (318)
T ss_dssp EEEEEETTB----------SSCCEEEEETTCEEEEEEEECSSSC----BCCEEETCCCTTCGGGSCCBT----TTBCCBC
T ss_pred EEEEEECCc----------cCCceEEEeCCCEEEEEEEeCCCCc----eeEEecCcCCCCCcccCCCcc----cccccCC
Confidence 468999998 7789999999999999999998653 34777877765 5799653 5678999
Q ss_pred CCceEEEEEecCCCCceEEEEEEec-C-----CCceeeEEEEEcCCCCCCCCCC-------CCCC----------CCCCC
Q psy16562 322 PGDRVDVIIHTNQSNNLYWMQAKTL-C-----DSITAEAVLQYEGEKLTYVSKR-------PKSD----------SFPRG 378 (445)
Q Consensus 322 pGeR~dv~v~~~~~~G~y~~~~~~~-~-----~~~~~~ail~y~~~~~~~~~~~-------P~~~----------~~~~~ 378 (445)
||++++|.+++++ +|+||||+|.. . .++.+..|+.-......+.... -++. ..+..
T Consensus 84 PG~~~~y~f~~~~-~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~~~d~e~~l~l~dw~~~~~~~~~~~~~~~~ 162 (318)
T 3g5w_A 84 PGDTFTYKFKAEP-AGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEKTVTKDYILMLSDWVSSWANKPGEGGIPGD 162 (318)
T ss_dssp TTCEEEEEEECCS-CEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHHTCCEEEEEEEEEECGGGTTCTTCCCCTTC
T ss_pred CCCEEEEEEEcCC-CEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccccccceeEEEEEeeccccccccccCCCCCC
Confidence 9999999999986 89999999975 1 4666655554222110000000 0000 00000
Q ss_pred ---CCCCCCCCCcc-ceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccC-CCeEEeEEEecC
Q psy16562 379 ---KPKDNSPRVPM-HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV-EPLVVDSVTLFP 445 (445)
Q Consensus 379 ---~~~~~~~~~~~-~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~-~p~~~Dtv~v~p 445 (445)
.-..|+..++. ..+++++|+++||||+|++...|+| |||||.|+||++||.++ +|.++|+|.|.|
T Consensus 163 ~~d~~~ING~~~~~~~~l~v~~G~~vrlrliN~~~~~h~~--hlhGh~f~vi~~dG~~~~~p~~~dtv~l~p 232 (318)
T 3g5w_A 163 VFDYYTINAKSFPETQPIRVKKGDVIRLRLIGAGDHVHAI--HTHGHISQIAFKDGFPLDKPIKGDTVLIGP 232 (318)
T ss_dssp CCCEEEETTBCBTSSCCEEECTTCEEEEEEEECSSSCEEE--EETTSCEEEEEETTEEEEEEEEESEEEECT
T ss_pred cCcEEEEcCcCCCCCccEEeCCCCEEEEEEEeCCCceEEE--EECCcEEEEEecCCcccCCCccccEEEECC
Confidence 00122222221 2489999999999999999888776 99999999999999988 589999999986
No 44
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.85 E-value=2.8e-21 Score=203.87 Aligned_cols=183 Identities=21% Similarity=0.281 Sum_probs=137.4
Q ss_pred CCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEE---ccCCCcceeeEecEEE
Q psy16562 243 IKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI---ASDGTAVEPLVVDSVT 319 (445)
Q Consensus 243 ~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~vi---a~DG~~v~P~~~~~~~ 319 (445)
.....+++||+ .|+|+|++++|+++++++.|..... ..+||||++.+. ..||.+ .++++.
T Consensus 20 ~~~~~~~~Ng~----------~PGP~i~~~~Gd~v~v~v~N~l~~~---~tsiHwHG~~~~~~~~~DG~~----~vtq~p 82 (534)
T 1zpu_A 20 KSRPVITCNGQ----------FPWPDITVNKGDRVQIYLTNGMNNT---NTSMHFHGLFQNGTASMDGVP----FLTQCP 82 (534)
T ss_dssp CCEEEEEETTB----------SSCCCEEEETTCEEEEEEECCCSSC---CBCCEEETCCCTTCGGGSCCB----TTTBCC
T ss_pred ceEEEEEECCc----------cCCccEEEECCCEEEEEEEeCCCCC---CeeEEcCCcccCCCCcccCCC----ccccCC
Confidence 45678999998 7889999999999999999999721 345899999885 469954 367899
Q ss_pred ecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCCCCC----CCC-----C----CCC-----C
Q psy16562 320 LFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVSKRP----KSD-----S----FPR-----G 378 (445)
Q Consensus 320 I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~~~P----~~~-----~----~~~-----~ 378 (445)
|.||++++|.|++++++|+||||+|.. ++++.+..||+-...+.......+ ++. . +.. +
T Consensus 83 I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~p~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~g 162 (534)
T 1zpu_A 83 IAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSFPYDYDEELSLSLSEWYHDLVTDLTKSFMSVYNPTG 162 (534)
T ss_dssp BCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTCCSCCSEEEEEEEEEECSSCHHHHHHHHSSTTCTTC
T ss_pred cCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCCCCCCcceEEEEeeccccCCHHHHHHHHhccccCCC
Confidence 999999999999996689999999987 577877766654332100000000 000 0 000 0
Q ss_pred C------CCCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 379 K------PKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 379 ~------~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
. ...|+.. ...++|++|++|||||+|++... .+.|+|+||.|+||+.||.+++|..+|+|.|+|
T Consensus 163 ~~~~~d~~liNG~~--~~~~~v~~g~~~RlRliNa~~~~-~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~ 232 (534)
T 1zpu_A 163 AEPIPQNLIVNNTM--NLTWEVQPDTTYLLRIVNVGGFV-SQYFWIEDHEMTVVEIDGITTEKNVTDMLYITV 232 (534)
T ss_dssp CCCCCSEEEETTBS--SCEEECCSSCEEEEEEEECCSSC-CEEEEETTBCEEEEEETTEEEEEEEESCEEECT
T ss_pred CCCCCceEEECCCC--ceEEEEECCCEEEEEEEeccCCc-eEEEEEcCCeeEEEeccCcCccccEeceEEECc
Confidence 0 0012221 23689999999999999999887 588999999999999999999999999999876
No 45
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.85 E-value=5.5e-21 Score=201.23 Aligned_cols=187 Identities=22% Similarity=0.345 Sum_probs=136.3
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCc-eeEEEEecccceEEE---ccCCCcceeeEecEEE
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLA-CPLIFTIEKHQLQVI---ASDGTAVEPLVVDSVT 319 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~-~~~~~~i~gh~~~vi---a~DG~~v~P~~~~~~~ 319 (445)
....+++||+ .|+|+|++++|+++++++.|..... .....+||||++.+. ..||++ .++++.
T Consensus 42 ~~~~~~~NG~----------~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~----~vtq~~ 107 (521)
T 1v10_A 42 ARSAVTAEGT----------TIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPA----FVNQCP 107 (521)
T ss_dssp CEEEEEESSS----------SSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCB----TTTBCC
T ss_pred eEEEEEECCc----------cCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCCc----ceeeCC
Confidence 5678999998 7889999999999999999999720 002455899999884 369954 357889
Q ss_pred ecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCCCCC--CCC------------CCC----C-
Q psy16562 320 LFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVSKRP--KSD------------SFP----R- 377 (445)
Q Consensus 320 I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~~~P--~~~------------~~~----~- 377 (445)
|.||++++|.|++.+++|+||||+|.. .+++.+..||+-..+.....-..+ +.. .+. .
T Consensus 108 I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~~~~~~~~~~ 187 (521)
T 1v10_A 108 IIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTVLFPNPNKA 187 (521)
T ss_dssp BCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC-------CC
T ss_pred cCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHHHHhhccCCC
Confidence 999999999999655689999999987 477877766654332110000000 000 000 0
Q ss_pred ----CCCCCCCCC--------CccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 378 ----GKPKDNSPR--------VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 378 ----~~~~~~~~~--------~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
.....|+.. .+...++|++|++|||||+|++... .+.|||+||.|+||+.||.+++|..+|++.|+|
T Consensus 188 ~~~~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~-~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~p 266 (521)
T 1v10_A 188 PPAPDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFP-NYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFA 266 (521)
T ss_dssp CSCCSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSC-CEEEEETTCCEEEEEETTEEEEEEEESBEEECT
T ss_pred CCCCCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcc-cEEEEECCCeEEEEecCCccccceeeeeEEEcc
Confidence 000012211 1224789999999999999999887 688999999999999999999999999999876
No 46
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.85 E-value=5.9e-21 Score=202.44 Aligned_cols=184 Identities=20% Similarity=0.296 Sum_probs=137.0
Q ss_pred CCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc---cCCCcceeeEecEE
Q psy16562 242 RIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA---SDGTAVEPLVVDSV 318 (445)
Q Consensus 242 ~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via---~DG~~v~P~~~~~~ 318 (445)
+.....++|||+ .|+|+|++++|+++++++.|..... ..+||||++.+.. .||++- ++++
T Consensus 19 g~~~~~~~~Ng~----------~PGP~I~~~~GD~v~v~v~N~l~~~---~tsiHwHGl~~~~~~~~DGv~~----vtq~ 81 (552)
T 1aoz_A 19 CNENIVMGINGQ----------FPGPTIRANAGDSVVVELTNKLHTE---GVVIHWHGILQRGTPWADGTAS----ISQC 81 (552)
T ss_dssp SSCEEEEEETTB----------SSCCCEEEETTCEEEEEEEECCSSC---CBCEEEETCCCTTCGGGSCCBT----TTBC
T ss_pred CceEEEEEECCc----------cCCCcEEEeCCCEEEEEEEeCCCCC---CeeEEeCCCccCCCcccCCCcc----cccC
Confidence 345678999998 7889999999999999999999621 3458999998865 599643 6789
Q ss_pred EecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCCC---------------------------
Q psy16562 319 TLFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVSK--------------------------- 368 (445)
Q Consensus 319 ~I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~~--------------------------- 368 (445)
.|.||++++|.|++++ +|+||||+|.. .+++.+..||+-......+...
T Consensus 82 ~I~PG~s~tY~f~~~~-~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~ 160 (552)
T 1aoz_A 82 AINPGETFFYNFTVDN-PGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSSKP 160 (552)
T ss_dssp CBCTTCEEEEEEECCS-CEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSSCCSEEEEEEEEEECSSCHHHHHHHTTSSS
T ss_pred CcCCCCeEEEEEECCC-CEEEEEEECchhHHhccCeeeEEEeCCcccCCCCCCCccceEEeecccCCCHHHHHhhhhccc
Confidence 9999999999999965 89999999987 4778777776654321111000
Q ss_pred -----CCCCCCCCCCCCCCC------------------CCCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEE
Q psy16562 369 -----RPKSDSFPRGKPKDN------------------SPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQV 425 (445)
Q Consensus 369 -----~P~~~~~~~~~~~~~------------------~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~V 425 (445)
.|+. .+.++....+ ....+...++|++|++|||||||++... .+.|||+||.|+|
T Consensus 161 ~~~~~~~~~-~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~-~~~~~i~gh~~~v 238 (552)
T 1aoz_A 161 IRWIGEPQT-ILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALA-ALNFAIGNHQLLV 238 (552)
T ss_dssp CCCCCSCSE-EEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSC-EEEEEETTCCEEE
T ss_pred ccCCCCCCe-EEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccc-eEEEEEcCcEEEE
Confidence 0000 0111111100 0001122689999999999999998876 6889999999999
Q ss_pred EecCCccCCCeEEeEEEecC
Q psy16562 426 IASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 426 i~~dG~~~~p~~~Dtv~v~p 445 (445)
|+.||.+++|..+|++.|.|
T Consensus 239 i~~DG~~~~P~~~~~l~i~p 258 (552)
T 1aoz_A 239 VEADGNYVQPFYTSDIDIYS 258 (552)
T ss_dssp EEETTEEEEEEEESCEEECT
T ss_pred EEECCcccCceEEeEEEEcC
Confidence 99999999999999999876
No 47
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.85 E-value=6.1e-21 Score=200.09 Aligned_cols=187 Identities=21% Similarity=0.351 Sum_probs=136.2
Q ss_pred CCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCc-eeEEEEecccceEEE---ccCCCcceeeEecEE
Q psy16562 243 IKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLA-CPLIFTIEKHQLQVI---ASDGTAVEPLVVDSV 318 (445)
Q Consensus 243 ~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~-~~~~~~i~gh~~~vi---a~DG~~v~P~~~~~~ 318 (445)
.....+++||+ . +|+|++++|+++++++.|..... +....+||||++.+. ..||++ .++++
T Consensus 21 ~~~~~~~~NG~----------~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~----~vtq~ 85 (503)
T 1hfu_A 21 FTRAGILVNGV----------H-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGAD----GVNQC 85 (503)
T ss_dssp CCEEEEEETTB----------S-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCB----TTTBC
T ss_pred eEEEEEEECCc----------c-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCc----ccccC
Confidence 45578999998 6 68999999999999999999710 002345899999883 369954 35788
Q ss_pred EecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCCCCC--CCC--------------------
Q psy16562 319 TLFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVSKRP--KSD-------------------- 373 (445)
Q Consensus 319 ~I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~~~P--~~~-------------------- 373 (445)
.|.||++++|.|++.+++|+||||+|.. ++++.+..|++-..+........+ +..
T Consensus 86 ~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~~~~~~ 165 (503)
T 1hfu_A 86 PISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQGAAQP 165 (503)
T ss_dssp CBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC---CC
T ss_pred CcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhcCCCCC
Confidence 9999999999999655689999999987 577877776654332110000000 000
Q ss_pred --CCCCCCC-CCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 374 --SFPRGKP-KDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 374 --~~~~~~~-~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
.+.++.. ..+....+...++|++|++|||||+|++... .+.|||+||.|+||+.||.+++|..+|++.|+|
T Consensus 166 d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~-~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~p 239 (503)
T 1hfu_A 166 DATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDP-NWQFSIDGHELTIIEVDGELTEPHTVDRLQIFT 239 (503)
T ss_dssp SEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSC-CEEEEETTCCEEEEEETTEEEEEEEESBEEECT
T ss_pred CEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcc-cEEEEEcCceEEEEeccCccccccccCeEEEcc
Confidence 0011111 1111112235789999999999999999887 688999999999999999999999999999876
No 48
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.84 E-value=7.3e-21 Score=201.84 Aligned_cols=182 Identities=19% Similarity=0.207 Sum_probs=134.8
Q ss_pred CCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEE---ccCCCcceeeEecEEEec
Q psy16562 245 PDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI---ASDGTAVEPLVVDSVTLF 321 (445)
Q Consensus 245 ~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~vi---a~DG~~v~P~~~~~~~I~ 321 (445)
...+++||+ .|+|+|++++|+++++++.|..... ..+||||++.+. ..||++ .++++.|.
T Consensus 55 ~~~~~~Ng~----------~PGP~i~~~~GD~v~v~v~N~l~~~---~tsiHwHG~~~~~~~~~DG~~----~~tq~~I~ 117 (559)
T 2q9o_A 55 EKVMLINGN----------IMGPNIVANWGDTVEVTVINNLVTN---GTSIHWHGIXQKDTNLHDGAN----GVTECPIP 117 (559)
T ss_dssp EEEEEETTB----------SSCCCEEEETTCEEEEEEEEECSSC---CBCEEEETCCCTTCGGGSCCB----TTTBCCBC
T ss_pred eEEEEECCc----------ccCCcEEEeCCCEEEEEEEeCCCCC---CceEEcCCCccCCCCCcCCCC----ccccCccC
Confidence 578999998 7889999999999999999999432 345899999884 469954 35788999
Q ss_pred C-CceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCC------------------------CCCCCC
Q psy16562 322 P-GDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVS------------------------KRPKSD 373 (445)
Q Consensus 322 p-GeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~------------------------~~P~~~ 373 (445)
| |++++|.|+++| +|+||||+|.. ..++.+..||+-......... ..+..+
T Consensus 118 P~G~~~~Y~f~~~q-~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~d~d~~~l~l~Dw~~~~~~~~~~~~~~~~~~~~d 196 (559)
T 2q9o_A 118 PKGGQRTYRWRARQ-YGTSWYHSHFSAQYGNGVVGTIQINGPASLPYDIDLGVFPITDYYYRAADDLVHFTQNNAPPFSD 196 (559)
T ss_dssp TTTEEEEEEEECCS-CEEEEEEECSTTGGGGTCEEEEEEECCCSSCCSEEEEEEEEEEECSSCHHHHHHHHTTSCCCCBS
T ss_pred CCCCeEEEEEECCC-CEEEEEEEcccchhcCCceEEEEecCCCcCCCcccceEEEEeccccCCHHHHhhhhhcCCCCccc
Confidence 9 999999999987 89999999987 477777766653221110000 000000
Q ss_pred -CCCCCCCCC-CCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 374 -SFPRGKPKD-NSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 374 -~~~~~~~~~-~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
.+.++.... ....-....+++++|++|||||||++... .+.|||+||.|+||+.||.+++|..+|++.|+|
T Consensus 197 ~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~-~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~p 269 (559)
T 2q9o_A 197 NVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTEN-HFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAV 269 (559)
T ss_dssp EEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSC-CEEEEETTBCEEEEEETTEEEEEEEESCEEECT
T ss_pred eeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCc-eEEEEECCCceEEEecCCcccCceEeCeEEEcc
Confidence 011111100 00000134689999999999999999887 688999999999999999999999999999876
No 49
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.83 E-value=1.8e-20 Score=182.97 Aligned_cols=180 Identities=9% Similarity=0.064 Sum_probs=128.6
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPG 323 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pG 323 (445)
....+++||+ .|+|+|++++|+++++++.|.+... .. ||+|++...+.||.+. ++++.|.||
T Consensus 53 ~~~~~~~ng~----------~pgP~i~~~~Gd~v~v~~~N~~~~~--~~--iH~HG~~~~~~DG~p~----~~~~~i~PG 114 (288)
T 3gdc_A 53 IFKGWSYNGR----------IPGPTLWAREGDALRIHFTNAGAHP--HT--IHFHGVHRATMDGTPG----IGAGSIAPG 114 (288)
T ss_dssp EEEEEEETTB----------SSCCEEEEETTCEEEEEEEECSSSC--BC--CEESSCCCGGGSCCTT----STTCSBCTT
T ss_pred EEEEEEECCc----------cCCCcEEEeCCCEEEEEEEeCCCCc--cc--EEeccccccccCCCCC----ccceeECCC
Confidence 4578999998 6789999999999999999998753 33 6666666667899764 467889999
Q ss_pred ceEEEEEecCCCCceEEEEEEec------CCCceeeEEEEEcCCCCCCCCCC----CCCCCCCCCC----CCCCCCCCc-
Q psy16562 324 DRVDVIIHTNQSNNLYWMQAKTL------CDSITAEAVLQYEGEKLTYVSKR----PKSDSFPRGK----PKDNSPRVP- 388 (445)
Q Consensus 324 eR~dv~v~~~~~~G~y~~~~~~~------~~~~~~~ail~y~~~~~~~~~~~----P~~~~~~~~~----~~~~~~~~~- 388 (445)
++++|.|++++ +|+||||+|.. ..++.+..|+.-........... -++. ...+. -..|+..++
T Consensus 115 ~~~~y~f~~~~-~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~~~d~e~~l~~~d~~-~~~g~~~~~~~iNG~~~~~ 192 (288)
T 3gdc_A 115 QSFTYEFDATP-FGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRPPADDEMVMVMNGYN-TDGGDDNEFYSVNGLPFHF 192 (288)
T ss_dssp CEEEEEEECCS-CEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCCCCSEEEEEEEEEEC-CSSTTCCSEEEETTSTTHH
T ss_pred CEEEEEEEcCC-CccEEEEecCcchHHHHhCcCeEEEEEeCCccCCCCcceEEEEEeeEe-cCCCCCcceEEECcccccc
Confidence 99999999975 89999999974 36777776664433211000000 0000 00000 012333332
Q ss_pred -cceeEeeCCcEEEEEEEcCCCC--ccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 389 -MHFFKVQRDKRYLMRIIGGSCL--ACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 389 -~~~~~v~~G~~~~~rliN~s~~--~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
...++++.|+++||||+|.+.. .||| |||||+|+|++.++....|.++||+.|.|
T Consensus 193 ~~~~l~v~~Ge~vr~~l~N~g~~~~~H~f--HlhG~~f~v~~~g~~~~~~~~~Dtv~v~p 250 (288)
T 3gdc_A 193 MDFPVKVKQHELVRIHLINVLEYDPINSF--HIHGNFFHYYPTGTMLTPSEYTDTISQVQ 250 (288)
T ss_dssp HHSCEEEETTCCEEEEEEECCCSSSEEEE--EETTCCEEEEETTCCSSCSEEESEEEEET
T ss_pred cCcccccCCCCEEEEEEEeCCCCCcceeE--EEcCCEEEEEcCCCccCCCceeeEEEeCC
Confidence 2358999999999999999854 4777 99999999998655555579999999976
No 50
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.82 E-value=1.3e-20 Score=195.09 Aligned_cols=178 Identities=16% Similarity=0.187 Sum_probs=132.7
Q ss_pred CCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc-cCCCcceeeEecEEEec
Q psy16562 243 IKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA-SDGTAVEPLVVDSVTLF 321 (445)
Q Consensus 243 ~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via-~DG~~v~P~~~~~~~I~ 321 (445)
.....+++||+ .|+|+|++++|+++++++.|..... .+||||++.+-. .||++ ++.|.
T Consensus 36 ~~~~~~~~ng~----------~pGP~i~~~~Gd~v~v~~~N~l~~~----tsiHwHG~~~~~~~DG~~-------~~~i~ 94 (451)
T 2uxt_A 36 TRASVWGINGR----------YLGPTIRVWKGDDVKLIYSNRLTEN----VSMTVAGLQVPGPLMGGP-------ARMMS 94 (451)
T ss_dssp SSSCCEEETTS----------SBCCEEEEETTCEEEEEEEECSSSC----BCEEEETCCCCGGGSCSG-------GGCBC
T ss_pred ceeEEEEECCc----------ccCceEEEeCCCEEEEEEEECCCCC----ccEEECCccCCCCCCCCC-------cCcCC
Confidence 45678999998 7889999999999999999999753 448899888865 59965 57799
Q ss_pred CCceEEEEEecCCCCceEEEEEEec-------CCCceeeEEEEEcCCCCCCCCC---CCCCCCCCC-------C------
Q psy16562 322 PGDRVDVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQYEGEKLTYVSK---RPKSDSFPR-------G------ 378 (445)
Q Consensus 322 pGeR~dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~---~P~~~~~~~-------~------ 378 (445)
||++++|.|++++++|+||||+|.. +.++.+..|++-......+.+. .-+...+++ +
T Consensus 95 PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~~~ 174 (451)
T 2uxt_A 95 PNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNE 174 (451)
T ss_dssp TTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEECCC
T ss_pred CCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCceeccc
Confidence 9999999999998789999999973 4778887776543221110000 000000000 0
Q ss_pred ---------CCCCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEE-eCeeEEEEecCCccC-CCeEEeEEEecC
Q psy16562 379 ---------KPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTI-EKHQLQVIASDGTAV-EPLVVDSVTLFP 445 (445)
Q Consensus 379 ---------~~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hi-hgh~f~Vi~~dG~~~-~p~~~Dtv~v~p 445 (445)
....|+... +.+++++| +|||||+|++... .+.||| |||.|+||+.||.++ +|..+|++.|+|
T Consensus 175 ~~~~~~~~d~~liNG~~~--p~~~v~~g-~~RlRliNa~~~~-~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~p 248 (451)
T 2uxt_A 175 PGSGGFVGDTLLVNGVQS--PYVEVSRG-WVRLRLLNASNSR-RYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAP 248 (451)
T ss_dssp CSSSCCCCSEEEETTEES--CEEEECSS-EEEEEEEECCSSC-CEEEEETTSCCEEEEECSSSEEEEEEEESSEEECT
T ss_pred ccCCCCcCCEEEECCccc--ceEEecCC-EEEEEEEccCCce-eEEEEECCCCeEEEEEeCCCccCCceEeceEEECc
Confidence 000122212 36899999 9999999999876 688999 899999999999987 699999999876
No 51
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.81 E-value=2.6e-20 Score=185.01 Aligned_cols=173 Identities=14% Similarity=0.154 Sum_probs=124.0
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPG 323 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pG 323 (445)
....+++||+ .|+|+|+|++|++++||++|.+....++. +|+|++. +.||.+. ...|.||
T Consensus 57 ~~~~~~~ng~----------~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~--ih~HG~~--~~dG~~~------~~~i~PG 116 (327)
T 1kbv_A 57 EYRYWTFDGD----------VPGRMIRVREGDTVEVEFSNNPSSTVPHN--VDFHAAT--GQGGGAA------ATFTAPG 116 (327)
T ss_dssp EEEEEEETTB----------SSCCBEEEETTCEEEEEEEECTTCSSCBC--CEETTCC--SGGGGTT------TTCBCTT
T ss_pred EEEEEEECCc----------cCCCeEEEeCCCEEEEEEEECCCCCCcee--eEeCccc--cCCCCCc------ceeecCC
Confidence 4467999998 67899999999999999999985322344 5556553 6788642 1249999
Q ss_pred ceEEEEEecCCCCceEEEEEEec------CCCceeeEEEEEcCCCCCCCCCCCCCCC---------C-C-----------
Q psy16562 324 DRVDVIIHTNQSNNLYWMQAKTL------CDSITAEAVLQYEGEKLTYVSKRPKSDS---------F-P----------- 376 (445)
Q Consensus 324 eR~dv~v~~~~~~G~y~~~~~~~------~~~~~~~ail~y~~~~~~~~~~~P~~~~---------~-~----------- 376 (445)
++++|.|++++ +|+||||+|.. ..++.+..+++ .... . |..+. . .
T Consensus 117 ~~~~y~f~~~~-~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~-~~~~-~-----p~~d~e~~l~~~d~~~~~~~~~~g~~~~ 188 (327)
T 1kbv_A 117 RTSTFSFKALQ-PGLYIYHCAVAPVGMHIANGMYGLILVE-PKEG-L-----PKVDKEFYIVQGDFYTKGKKGAQGLQPF 188 (327)
T ss_dssp EEEEEEEECCS-CEEEEEECCCSSHHHHHHTTCEEEEEEE-CTTC-C-----CCCSEEEEEEEEEECBSSCTTCCEEECB
T ss_pred CEEEEEEECCC-CeEEEEEeCCCChhhhhhcceEEEEEEe-cCCC-C-----CCCceEEEEEeeeeeccCcccccccccc
Confidence 99999999988 79999999863 36676665554 2211 1 11100 0 0
Q ss_pred ---------CCCCCCCCCCCcc---ceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEec
Q psy16562 377 ---------RGKPKDNSPRVPM---HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLF 444 (445)
Q Consensus 377 ---------~~~~~~~~~~~~~---~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~ 444 (445)
......|+...+. ..+++++|++|||||+|++... .+.||||||.|+||+.||.+++|..+|++.|.
T Consensus 189 ~~~~~~~~~~~~~~iNG~~~~~~~~~~l~v~~G~~vRlRliN~~~~~-~~~~~l~Gh~f~vi~~DG~~~~p~~~d~l~l~ 267 (327)
T 1kbv_A 189 DMDKAVAEQPEYVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNL-VSSFHVIGEIFDKVYVEGGKLINENVQSTIVP 267 (327)
T ss_dssp CHHHHHHTCCSEEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSC-CEEEEEETCCBSEEEGGGSSCEECSBSEEEEC
T ss_pred ChhHhccCCCceEEEcCcccCCCCceeEEeCCCCEEEEEEECCCCCC-ceeEEEeCCEEEEEEcCCCcCCCCceeEEEEC
Confidence 0000123333322 3589999999999999998644 45669999999999999999999999999997
Q ss_pred C
Q psy16562 445 P 445 (445)
Q Consensus 445 p 445 (445)
|
T Consensus 268 p 268 (327)
T 1kbv_A 268 A 268 (327)
T ss_dssp T
T ss_pred C
Confidence 6
No 52
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.79 E-value=9.7e-20 Score=181.88 Aligned_cols=163 Identities=15% Similarity=0.198 Sum_probs=118.7
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEE-EccCCCcceeeEecEEEecCCceEEEEEecCCC-------
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQV-IASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQS------- 335 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~v-ia~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~------- 335 (445)
.|+|+|++++|+++|+||+|.+.. ++. ||+|++.+ ++.||.++ +++.|.|||+++|.|+++++
T Consensus 74 ~pGP~I~v~~Gd~v~v~~~N~l~~--~~s--ih~HG~~~~~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~ 144 (343)
T 3cg8_A 74 VPGPLIEVNEGDTLHIEFTNTMDV--RAS--LHVHGLDYEISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGT 144 (343)
T ss_dssp SSCCCEEEETTCEEEEEEEECSSS--CBC--CEESSSBCCGGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSC
T ss_pred ccCCEEEEECCCEEEEEEEECCCC--Cee--EEecCcccCCcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccc
Confidence 778999999999999999999965 233 77777666 67899764 57789999999999999763
Q ss_pred -----CceEEEEEEec---------CCCceeeEEEEEcCCCCCCCCCCCCCC--CCCCCCCCCCCCCC-ccceeEeeCCc
Q psy16562 336 -----NNLYWMQAKTL---------CDSITAEAVLQYEGEKLTYVSKRPKSD--SFPRGKPKDNSPRV-PMHFFKVQRDK 398 (445)
Q Consensus 336 -----~G~y~~~~~~~---------~~~~~~~ail~y~~~~~~~~~~~P~~~--~~~~~~~~~~~~~~-~~~~~~v~~G~ 398 (445)
.|+||||+|.. ..++.+..|++..+.. .|+.+ .+.+.. ..|+..+ ....+.++.|+
T Consensus 145 ~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~------~pd~e~~l~~~d~-~iNG~~~~~~~~l~v~~Ge 217 (343)
T 3cg8_A 145 WRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV------LPDATHTIVFNDM-TINNRKPHTGPDFEATVGD 217 (343)
T ss_dssp EECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC------CCSEEEEEEEETT-EETTCCTTCCCCEEEETTC
T ss_pred cCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC------CCCceEEEEcccc-eecccCCCCCccEEeCCCC
Confidence 48899999851 3567777777655432 12211 111110 1222221 22368999999
Q ss_pred EEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCC----CeEEeEEEecC
Q psy16562 399 RYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE----PLVVDSVTLFP 445 (445)
Q Consensus 399 ~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~----p~~~Dtv~v~p 445 (445)
++||+|+|.+.+.||| |||||+|+|++ +|.... +.++||+.|.|
T Consensus 218 ~vri~l~N~g~~~Hpf--HlHGh~f~v~~-~G~~~~p~~~~~~~Dtv~v~P 265 (343)
T 3cg8_A 218 RVEIVMITHGEYYHTF--HMHGHRWADNR-TGILTGPDDPSRVIDNKITGP 265 (343)
T ss_dssp EEEEEEEEESSCCEEE--EETTCCEESSS-SSSCCSTTCCCCEESEEEECT
T ss_pred EEEEEEEcCCcccccc--EecCcEEEEec-cCcccCCCCcccceeeEEeCC
Confidence 9999999999888887 99999999974 565432 47899999976
No 53
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.78 E-value=3.6e-19 Score=174.53 Aligned_cols=164 Identities=14% Similarity=0.191 Sum_probs=119.6
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEE-ccCCCcceeeEecEEEecCCceEEEEEecCC--------
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI-ASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQ-------- 334 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~vi-a~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~-------- 334 (445)
.|+|+|++++||+++++|.|.+... .+||+|++.+- +.||.++ ++..|.||++++|.+++++
T Consensus 55 ~PGP~i~~~~GD~v~v~~~N~l~~~----~siH~HG~~~~~~~DG~~~-----~~~~i~PG~t~~Y~~~~~~~~~~~~~~ 125 (299)
T 3t9w_A 55 VPGPVLEMWEGDTLEIDLVNTTDRV----LSLHPHGVDYDVNSDGTLM-----NGSAVMPGQTRRYTWRSHVGYRRADGS 125 (299)
T ss_dssp SSCCCEEEETTCEEEEEEEECSSSC----BCCEESSSBCCGGGSCCTT-----TTCCBCTTCEEEEEEBCCCCEECTTSC
T ss_pred ccCceEEEECCeEEEEEEEECCCCC----ccEEeCCcccCCccCCCcc-----ccCccCCCCeEEEEEEeecccccCCCc
Confidence 7899999999999999999998753 34788887664 4699653 5677999999999999863
Q ss_pred ----CCceEEEEEEec---------CCCceeeEEEEEcCCCCCCCCCCCCCC--CCCCCCCCCCCCC-CccceeEeeCCc
Q psy16562 335 ----SNNLYWMQAKTL---------CDSITAEAVLQYEGEKLTYVSKRPKSD--SFPRGKPKDNSPR-VPMHFFKVQRDK 398 (445)
Q Consensus 335 ----~~G~y~~~~~~~---------~~~~~~~ail~y~~~~~~~~~~~P~~~--~~~~~~~~~~~~~-~~~~~~~v~~G~ 398 (445)
.+|+||||+|.. ..++.+..|+.-.+.. .|+.+ .+.+... .++.. .....++++.|+
T Consensus 126 ~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~------~~d~e~~l~~~~~~-~Ng~~~~~~p~l~v~~Ge 198 (299)
T 3t9w_A 126 WAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL------LPKRQFTVVFNDMM-INNRAHHDAPTFEANLGE 198 (299)
T ss_dssp EECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC------CCSEEEEEEEETTE-ETTCCTTCCCEEEEETTC
T ss_pred CCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc------Cccccceeeeeeee-ecCccccccccceecCCC
Confidence 469999999864 1466676666533321 12221 1111110 11111 122368999999
Q ss_pred EEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCC---CeEEeEEEecC
Q psy16562 399 RYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE---PLVVDSVTLFP 445 (445)
Q Consensus 399 ~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~---p~~~Dtv~v~p 445 (445)
++||+|+|.+...||| |||||.|+|+..++.... +.++|++.|.|
T Consensus 199 ~Vr~~liN~~~~~Hpf--HlHGh~F~v~~~g~~~~~~~~~~~~Dtv~v~P 246 (299)
T 3t9w_A 199 RVEWIAIGHGSNFHTF--HLHGHRWLDNRTGMRTSEYDPSPLIDIKDLNP 246 (299)
T ss_dssp EEEEEEEEESSCCCEE--EETTCCEESSSSSSCCSTTCCCCEESEEECCT
T ss_pred EEEEEEEeccccceee--eEecceEEEEecccccCCcCCCCceeeEEeCC
Confidence 9999999999988887 999999999999887665 45889998876
No 54
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.78 E-value=4.2e-19 Score=175.24 Aligned_cols=165 Identities=13% Similarity=0.159 Sum_probs=120.3
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEE-ccCCCcceeeEecEEEecCCceEEEEEecCC--------
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI-ASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQ-------- 334 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~vi-a~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~-------- 334 (445)
.|+|+|+++.||+++++|.|.+... .+||+|++.+- +.||.+. ++..|.||++++|.+++.+
T Consensus 39 ~PGP~i~~~~Gd~v~v~~~N~l~~~----~siH~HG~~~~~~~dG~~~-----~~~~i~PG~~~~Y~~~~~~P~~~~~~~ 109 (313)
T 3tas_A 39 IPGPLIELNEGDTLHIEFENTMDVP----VSLHVHGLDYEISSDGTKQ-----SRSDVEPGGTRTYTWRTHVPGRRADGT 109 (313)
T ss_dssp SSCCCEEEETTCEEEEEEEECSSSC----BCCEESSSBCCGGGSCSTT-----TTCCBCTTCEEEEEEBCCCCEECTTSC
T ss_pred ccCCeEEEECCCEEEEEEEECCCCC----ccEeecCCcCCccCCCCcc-----ccCCcCCCCEEEEEEEeccCCcccccc
Confidence 7899999999999999999998753 34788888764 4599653 5667999999999998752
Q ss_pred ----CCceEEEEEEec---------CCCceeeEEEEEcCCCCCCCCCCCCCC--CCCCCCCCCCCCCCccceeEeeCCcE
Q psy16562 335 ----SNNLYWMQAKTL---------CDSITAEAVLQYEGEKLTYVSKRPKSD--SFPRGKPKDNSPRVPMHFFKVQRDKR 399 (445)
Q Consensus 335 ----~~G~y~~~~~~~---------~~~~~~~ail~y~~~~~~~~~~~P~~~--~~~~~~~~~~~~~~~~~~~~v~~G~~ 399 (445)
+.|+||||+|.. ..++.+..|+.-.+.. .++.+ .+.+.....+........+.++.|++
T Consensus 110 ~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~------~~d~e~~l~~~d~t~Ng~~~~~~~~l~v~~Ge~ 183 (313)
T 3tas_A 110 WRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV------LPDRTHTIVFNDMTINNRPAHTGPDFEATVGDR 183 (313)
T ss_dssp EECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB------CCSEEEEEEEETTEETTCCTTCCCCEEEETTCE
T ss_pred ccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc------cccccceeeccchhcccCCcccccccccccCCE
Confidence 369999999864 2567777666543321 12211 11111100111111223589999999
Q ss_pred EEEEEEcCCCCccceEEEEeCeeEEEEecCCccCC---CeEEeEEEecC
Q psy16562 400 YLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE---PLVVDSVTLFP 445 (445)
Q Consensus 400 ~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~---p~~~Dtv~v~p 445 (445)
+||||+|.+.+.||| |||||.|+|+..||.... |.++||+.|.|
T Consensus 184 vr~~liN~g~~~hpf--HlHGh~F~v~~~~~~~~~~~~~~~~Dtv~l~P 230 (313)
T 3tas_A 184 VEFVMITHGEYYHTF--HLHGHRWADNRTGMLTGPDDPSQVIDNKICGP 230 (313)
T ss_dssp EEEEEEEESSCCEEE--EETTCCEESSTTSSCCSTTCCCCEESEEEECT
T ss_pred EEEEEecccccceee--eecCCeeEEEEECCccCCCCCCeeeeEEEeCC
Confidence 999999999888876 999999999999987664 78999999986
No 55
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.77 E-value=6.2e-19 Score=183.12 Aligned_cols=173 Identities=17% Similarity=0.210 Sum_probs=129.2
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc-cCCCcceeeEecEEEecC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA-SDGTAVEPLVVDSVTLFP 322 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via-~DG~~v~P~~~~~~~I~p 322 (445)
....+++||+ .|+|+|++++|+++++++.|..... .+||||++.+-. .||.+ ++.|.|
T Consensus 69 ~~~~~~~NG~----------~PGPtIr~~~Gd~v~v~v~N~l~~~----tsiHwHGl~~~~~~DG~p-------q~~I~P 127 (481)
T 3zx1_A 69 KTLFYTYNGL----------VPAPKIEVFEGDKLEILVKNKLKEA----TTIHWHGVPVPPDQDGSP-------HDPILA 127 (481)
T ss_dssp CEEEEEETTB----------SSCCBEEEETTCEEEEEEEECSSSC----BCCEEETCCCCGGGSCCT-------TSCBCT
T ss_pred EEEEEEECCC----------CCCceEEEECCcEEEEEEEeCCCCC----eeEEecCcccCCccCCCc-------cCcCCC
Confidence 4578999998 7889999999999999999999753 458899988754 59963 578999
Q ss_pred CceEEEEEecCCC-CceEEEEEEec-------CCCceeeEEEEEcCCCCCCCCCCCC-------C-----CCCC------
Q psy16562 323 GDRVDVIIHTNQS-NNLYWMQAKTL-------CDSITAEAVLQYEGEKLTYVSKRPK-------S-----DSFP------ 376 (445)
Q Consensus 323 GeR~dv~v~~~~~-~G~y~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~~P~-------~-----~~~~------ 376 (445)
|++++|.|+++++ +|+||||+|.. ..++.+..||+-....... +|. + ..+.
T Consensus 128 G~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~---~~~~~l~l~D~~~~~~g~~~~~~~~~ 204 (481)
T 3zx1_A 128 GEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSH---LKEKDLMISDLRLDENAQIPNNNLND 204 (481)
T ss_dssp TCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTT---SEEEEEEEEEECCBTTSCCCCCCHHH
T ss_pred CCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccC---CCceeEEEEEEeccCCCccccccchh
Confidence 9999999999875 69999999963 3778887776544322110 010 0 0000
Q ss_pred ------CCCCCCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccC-CCeEEeEEEecC
Q psy16562 377 ------RGKPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV-EPLVVDSVTLFP 445 (445)
Q Consensus 377 ------~~~~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~-~p~~~Dtv~v~p 445 (445)
......|+... +.+++++|+ ||||+|++... .+.|+|+||.|+||+.||..+ +|..+|++.|+|
T Consensus 205 ~~~g~~gd~~lvNG~~~--p~l~v~~g~--RlRliNa~~~~-~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~l~p 275 (481)
T 3zx1_A 205 WLNGREGEFVLINGQFK--PKIKLATNE--RIRIYNATAAR-YLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSP 275 (481)
T ss_dssp HHHCCCCSEEEETTEES--CEEEEETTE--EEEEEECCSSC-CEEEEETTCEEEEEEETTEEEEEEEEESSEEECT
T ss_pred hccCCcCCEEEECCccC--ceEEecCCC--EEEEEecCCCe-EEEEEECCCceEEEEcCCCccCCceEeCeEEECC
Confidence 00001122222 268999999 99999999887 689999999999999998765 589999998876
No 56
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.76 E-value=4.7e-19 Score=182.79 Aligned_cols=176 Identities=15% Similarity=0.199 Sum_probs=127.1
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc-cCCCcceeeEecEEEecC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA-SDGTAVEPLVVDSVTLFP 322 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via-~DG~~v~P~~~~~~~I~p 322 (445)
....+++||+ .|+|+|++++||++++++.|..... .+||||++.+-. .||.+ +.|.|
T Consensus 34 ~~~~~~~ng~----------~pGP~i~~~~Gd~v~v~~~N~l~~~----tsiHwHG~~~~~~~DG~~--------~~I~P 91 (439)
T 2xu9_A 34 RATLLTYGGS----------FPGPTLRVRPRDTVRLTLENRLPEP----TNLHWHGLPISPKVDDPF--------LEIPP 91 (439)
T ss_dssp EEEEEEETTB----------SSCCEEEECTTCEEEEEEEECSSSC----BCCEEETCCCCTTTSCTT--------CCBCT
T ss_pred eEEEEEECCc----------ccCCEEEEeCCCEEEEEEEECCCCC----cceEeCCCCCCccccCCc--------ccCCC
Confidence 4578999998 7889999999999999999999753 348888887754 68854 23999
Q ss_pred CceEEEEEecC-CCCceEEEEEEec-------CCCceeeEEEEEcCCCCCCCCCCCCCCC-----------CCC------
Q psy16562 323 GDRVDVIIHTN-QSNNLYWMQAKTL-------CDSITAEAVLQYEGEKLTYVSKRPKSDS-----------FPR------ 377 (445)
Q Consensus 323 GeR~dv~v~~~-~~~G~y~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~~P~~~~-----------~~~------ 377 (445)
|++|+|.|+++ +++|+||||+|.. ..++.+..|++-..+.........+... +..
T Consensus 92 G~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~~~~~e~~l~l~D~~~~~~~~~~~~~~~~ 171 (439)
T 2xu9_A 92 GESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPELREAEEHLLVLKDLALQGGRPAPHTPMDW 171 (439)
T ss_dssp TCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGSHHHHTSEEEEEEEEEECEETTEECCCCHHHH
T ss_pred CCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccCccCCCCCcEEEEEEeeeeCCCCcCCCCcccc
Confidence 99999999975 3589999999963 4677777666432211000000000000 000
Q ss_pred ------CCCCCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccC-CCeEEeEEEecC
Q psy16562 378 ------GKPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV-EPLVVDSVTLFP 445 (445)
Q Consensus 378 ------~~~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~-~p~~~Dtv~v~p 445 (445)
.....|+.. ...+++++| +|||||+|++... .+.|||+||.|+||+.||.++ +|..+|++.|+|
T Consensus 172 ~~g~~~~~~~iNG~~--~p~l~v~~g-~~RlRliN~~~~~-~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~l~p 242 (439)
T 2xu9_A 172 MNGKEGDLVLVNGAL--RPTLVAQKA-TLRLRLLNASNAR-YYRLALQDHPLYLIAADGGFLEEPLEVSELLLAP 242 (439)
T ss_dssp HHCCCCSEEEETTEE--SCEEECSSS-EEEEEEEECCSSC-CEEEEETTBCEEEEEETTEEEEEEEEESCEEECT
T ss_pred ccCCCCCEEEECCcc--CCcEEecCC-eEEEEEEecCCCc-eEEEEECCceEEEEecCCCCCCCceEeceEEECC
Confidence 000112221 236899999 9999999999887 588999999999999999997 699999999876
No 57
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.76 E-value=6e-19 Score=183.32 Aligned_cols=177 Identities=21% Similarity=0.267 Sum_probs=128.1
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc-cCCCcceeeEecEEEecC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA-SDGTAVEPLVVDSVTLFP 322 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via-~DG~~v~P~~~~~~~I~p 322 (445)
....+++||+ .|+|+|++++|+++++++.|..... .+||||++.+-. .||.+ ++.|.|
T Consensus 35 ~~~~~~~NG~----------~pGP~i~~~~Gd~v~v~~~N~l~~~----tsiHwHG~~~~~~~DG~p-------~~~i~P 93 (488)
T 3od3_A 35 TATTWGYNGN----------LLGPAVKLQRGKAVTVDIYNQLTEE----TTLHWHGLEVPGEVDGGP-------QGIIPP 93 (488)
T ss_dssp EEEEEEESSS----------SBCCEEEEETTCEEEEEEEECSSSC----BCCEEETCCCCHHHHCCT-------TCCBCT
T ss_pred EEEEEEECCc----------CCCCeEEEeCCeEEEEEEEeCCcCc----eeEeecccccCcccCCCC-------cCcCcC
Confidence 4568999998 7889999999999999999998753 348888888754 59964 577999
Q ss_pred CceEEEEEecCCCCceEEEEEEec-------CCCceeeEEEEEcCCCCCCCCCCCCCC---CCC------C-C-------
Q psy16562 323 GDRVDVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQYEGEKLTYVSKRPKSD---SFP------R-G------- 378 (445)
Q Consensus 323 GeR~dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~~P~~~---~~~------~-~------- 378 (445)
|++++|.|.+++++|+||||+|.. ..++.+..||+-........+..-+.+ .++ . +
T Consensus 94 G~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~~~~ 173 (488)
T 3od3_A 94 GGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLD 173 (488)
T ss_dssp TCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCCCCS
T ss_pred CCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceecccc
Confidence 999999999998789999999973 377777766654322111100000000 000 0 0
Q ss_pred -----------CCCCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEE-eCeeEEEEecCCccC-CCeEEeEEEecC
Q psy16562 379 -----------KPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTI-EKHQLQVIASDGTAV-EPLVVDSVTLFP 445 (445)
Q Consensus 379 -----------~~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hi-hgh~f~Vi~~dG~~~-~p~~~Dtv~v~p 445 (445)
....|+...+ .+ ..+|++|||||+|++... .|.|+| +||.|+||+.||.++ +|..+|+|.|+|
T Consensus 174 ~~~~~~g~~gd~~lvNG~~~p--~~-~v~g~~~RlRliNas~~~-~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l~p 249 (488)
T 3od3_A 174 VMTAAVGWFGDTLLTNGAIYP--QH-AAPRGWLRLRLLNGCNAR-SLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLM 249 (488)
T ss_dssp HHHHHHCCCCSEEEETTBSSC--EE-EEEEEEEEEEEEECCSSC-CEEEEETTCCCEEEEEETTEEEEEEEEESCEEECT
T ss_pred ccccccCCCCCEEEEcCCcCc--cE-ecCCCEEEEEEEccCCCc-eeeeeecCCCeEEEEEeCCCcccCccEeceEEECC
Confidence 0011222222 23 347889999999998776 788999 799999999999986 699999999876
No 58
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.75 E-value=6.6e-19 Score=182.01 Aligned_cols=173 Identities=16% Similarity=0.176 Sum_probs=128.0
Q ss_pred EEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc-cCCCcceeeEecEEEecCCceE
Q psy16562 248 ILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA-SDGTAVEPLVVDSVTLFPGDRV 326 (445)
Q Consensus 248 ~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via-~DG~~v~P~~~~~~~I~pGeR~ 326 (445)
+++||+. .|+|+|++++|+++++++.|..... .+||||++.+-. .||++. +.|.||+++
T Consensus 28 ~~~Ng~~---------~pGP~i~~~~Gd~v~v~~~N~l~~~----tsiHwHG~~~~~~~DG~~~-------~~i~PG~~~ 87 (448)
T 3aw5_A 28 SGYMAEG---------VLNPTIILRRGQRVDMTLKNKLTEP----TIVHWHGFDVNWHNDAHPS-------FAITPGESY 87 (448)
T ss_dssp TEEEETT---------EESCEEEEETTCEEEEEEEECSSSC----BCEEEETCCCCHHHHTCGG-------GCBCTTCEE
T ss_pred EEECCcc---------ccCceEEEeCCCEEEEEEEECCCCc----eeEEeCCccCCCccCCCCC-------ccCCCCCEE
Confidence 7889972 3568999999999999999999753 348888888754 599654 679999999
Q ss_pred EEEEecCCCCceEEEEEEec-------CCCceeeEEEEEcCCCCCCCCCC-CCCCCCC------CC--------------
Q psy16562 327 DVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQYEGEKLTYVSKR-PKSDSFP------RG-------------- 378 (445)
Q Consensus 327 dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~~-P~~~~~~------~~-------------- 378 (445)
+|.|++++++|+||||+|.. ..++.+..|++-.... .+.... .+...++ .+
T Consensus 88 ~Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~ 166 (448)
T 3aw5_A 88 NYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFKYGVNDLPLVISDRRFIGGAPVYNPTPMEMIAG 166 (448)
T ss_dssp EEEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTTT-TTCCBTTTEEEEEEEEEEEETTEEECCCCHHHHHHC
T ss_pred EEEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeCCccc-cCCCCCCceEEEEEEeeccCCCcccccccccccccC
Confidence 99999997789999999942 4778888776544332 000000 0000000 00
Q ss_pred ----CCCCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEE--eC---eeEEEEecCCccCC-CeEEeEEEecC
Q psy16562 379 ----KPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTI--EK---HQLQVIASDGTAVE-PLVVDSVTLFP 445 (445)
Q Consensus 379 ----~~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hi--hg---h~f~Vi~~dG~~~~-p~~~Dtv~v~p 445 (445)
....|+.. ...+++++| +|||||+|++... .+.||| ++ |.|+||+.||.+++ |..+|++.|+|
T Consensus 167 ~~~~~~liNG~~--~p~~~v~~g-~~RlRliNa~~~~-~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~p 239 (448)
T 3aw5_A 167 FLGNAVLVNGVK--DAVFKLSGG-SYRLRLVNGSNAR-LYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAP 239 (448)
T ss_dssp CCCSEEEETTEE--TCEEEEEEE-EEEEEEEECSSSC-CEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECT
T ss_pred ccccEEEECCcc--cceEEECCC-eEEEEEEcCCCcc-eEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECC
Confidence 00012221 236899999 9999999999886 688999 99 99999999999999 99999999876
No 59
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.75 E-value=1.1e-18 Score=169.22 Aligned_cols=163 Identities=15% Similarity=0.199 Sum_probs=118.4
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEE-ccCCCcceeeEecEEEecCCceEEEEEecCCC-------
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI-ASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQS------- 335 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~vi-a~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~------- 335 (445)
.|+|+|++++|+++++++.|.... ..+||+|++.+- ..||.+ ++++.|.||+++.|.++++++
T Consensus 33 ~pGP~i~~~~Gd~v~v~~~N~~~~----~~siH~HG~~~~~~~DG~~-----~t~~~i~pG~~~~Y~f~~~~~~~~~~g~ 103 (276)
T 3kw8_A 33 VPGPLIEVNEGDTLHIEFTNTMDV----RASLHVHGLDYEISSDGTA-----MNKSDVEPGGTRTYTWRTHKPGRRDDGT 103 (276)
T ss_dssp SSCCCEEEETTCEEEEEEEECSSS----CBCCEESSSBCCGGGSCCT-----TTTCSBCTTCEEEEEEECCCCEECTTSC
T ss_pred ccCCeEEEECCCEEEEEEEECCCC----CccEeecCcccCCccCCCc-----CCcCCCCCCCEEEEEEEcCCccccccCc
Confidence 789999999999999999999864 234778877764 469975 467889999999999999762
Q ss_pred -----CceEEEEEEec---------CCCceeeEEEEEcCCCCCCCCCCCCCC--CCCCCCCCCCCCCC-ccceeEeeCCc
Q psy16562 336 -----NNLYWMQAKTL---------CDSITAEAVLQYEGEKLTYVSKRPKSD--SFPRGKPKDNSPRV-PMHFFKVQRDK 398 (445)
Q Consensus 336 -----~G~y~~~~~~~---------~~~~~~~ail~y~~~~~~~~~~~P~~~--~~~~~~~~~~~~~~-~~~~~~v~~G~ 398 (445)
+|+||||+|.. ..++.+..|+.-.+... |+.+ .+.+.. ..|+..+ +...++++.|+
T Consensus 104 ~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~~------~drE~~l~l~~~-~iNG~~~~~~p~i~v~~G~ 176 (276)
T 3kw8_A 104 WRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL------PDATHTIVFNDM-TINNRKPHTGPDFEATVGD 176 (276)
T ss_dssp EECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC------CSEEEEEEEETT-EETTCCTTCCCCEEEETTC
T ss_pred cCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCcc------cccceEEEeccc-ccceecccCCCCEEEecCC
Confidence 58999999872 35677776665443221 1211 111110 1222221 23368999999
Q ss_pred EEEEEEEcCCCCccceEEEEeCeeEEEEecCCccC----CCeEEeEEEecC
Q psy16562 399 RYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV----EPLVVDSVTLFP 445 (445)
Q Consensus 399 ~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~----~p~~~Dtv~v~p 445 (445)
++||+|+|.+.+.||| |||||.|+|++ +|... .+.++|++.|.|
T Consensus 177 ~vri~l~N~~~~~Hp~--HlHG~~f~v~~-~G~~~~p~~~~~~~Dtv~v~p 224 (276)
T 3kw8_A 177 RVEIVMITHGEYYHTF--HMHGHRWADNR-TGILTGPDDPSRVIDNKITGP 224 (276)
T ss_dssp EEEEEEEEESSCCEEE--EETTCCEESSS-SSSCCSTTCCCCEESEEEECT
T ss_pred EEEEEEecCCCcceeE--EEccceeEEec-cCccCCCcccccCCccEEeCC
Confidence 9999999999888887 99999999975 56432 247999999976
No 60
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.74 E-value=2.5e-18 Score=181.11 Aligned_cols=174 Identities=19% Similarity=0.209 Sum_probs=127.1
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc-cCCCcceeeEecEEEecC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA-SDGTAVEPLVVDSVTLFP 322 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via-~DG~~v~P~~~~~~~I~p 322 (445)
....+++||+ .|+|+|++++|+++++++.|.+... .+||||++.+-. .||++ +..|.|
T Consensus 56 ~~~~~~~NG~----------~PGPtI~~~~Gd~v~v~v~N~l~~~----tsiHwHGl~~~~~~DG~~-------~~~i~P 114 (534)
T 3abg_A 56 SADLVGYDGM----------SPGPTFQVPRGVETVVRFINNAEAP----NSVHLHGSFSRAAFDGWA-------EDITEP 114 (534)
T ss_dssp CEECBEETSC----------SSEEEEEEETTCCEEEEEEECSSSC----BCEEEETCCCCTTTTTCS-------SSCBSS
T ss_pred ceeEEEECCc----------CcCceEEEeCCcEEEEEEEECCCCC----ceEEECCCcCCCCCCCCC-------CCCCCC
Confidence 4567899998 7899999999999999999999753 358888887754 59963 345899
Q ss_pred CceEEEEEecCCCCceEEEEEEec-------CCCceeeEEEEEcCCCCCCCCCCCC------CC------------CCCC
Q psy16562 323 GDRVDVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQYEGEKLTYVSKRPK------SD------------SFPR 377 (445)
Q Consensus 323 GeR~dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~~P~------~~------------~~~~ 377 (445)
|++++|.|.+++++|+||||+|.. ++++.+..||+-...... .+|. .. .+..
T Consensus 115 G~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~---~lp~~~~~~d~~l~l~d~~~~~~g~~~~ 191 (534)
T 3abg_A 115 GSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDAL---NLPSGYGEFDIPMILTSKQYTANGNLVT 191 (534)
T ss_dssp CSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTS---CTTCCHHHHSCCEEEEEECBCSSSCBCC
T ss_pred CCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCccccc---CCCccCCcceEEEEEeeeeecCCCceec
Confidence 999999999998789999999985 267777766654332211 1111 00 0000
Q ss_pred CCC----------CCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeC-------eeEEEEecCCcc-CCCeEEe
Q psy16562 378 GKP----------KDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEK-------HQLQVIASDGTA-VEPLVVD 439 (445)
Q Consensus 378 ~~~----------~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihg-------h~f~Vi~~dG~~-~~p~~~D 439 (445)
... ..|+.. ...+++++ ++|||||+|++... .+.|+|++ |.|+||+.||.. .+|..+|
T Consensus 192 ~~~~~~~~~gd~~lvNG~~--~p~~~v~~-~~~RlRliNa~~~~-~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~ 267 (534)
T 3abg_A 192 TNGELNSFWGDVIHVNGQP--WPFKNVEP-RKYRFRFLDAAVSR-SFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTS 267 (534)
T ss_dssp CTTCSSCCCCSEEEETTEE--SCBCBCCS-SEEEEEEEECCSSC-CEEEEECCSSSTTCCCCEEEEEETTEEEEEEEEES
T ss_pred cCCCCccccCceeccCCcc--CceEEecC-cEEEEEEEecCCcc-eEEEEEecccCcCCCccEEEEEeCCCcccCceEec
Confidence 000 011111 12467877 48999999999887 68899987 999999999984 5699999
Q ss_pred EEEecC
Q psy16562 440 SVTLFP 445 (445)
Q Consensus 440 tv~v~p 445 (445)
+|.|+|
T Consensus 268 ~l~l~p 273 (534)
T 3abg_A 268 LLYISM 273 (534)
T ss_dssp CEEECT
T ss_pred eEEECC
Confidence 998876
No 61
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.73 E-value=7.4e-18 Score=174.01 Aligned_cols=180 Identities=11% Similarity=0.048 Sum_probs=122.7
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPG 323 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pG 323 (445)
....++|||+ .|+|+|+++.|++++|++.|......++.+++| ++. ..||... ...|.||
T Consensus 47 ~~~~~~~ng~----------~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~H--G~~--~~dG~~~------~~~i~pg 106 (442)
T 2zoo_A 47 EYVFWSFGET----------VPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLH--AVT--GPGGGAE------SSFTAPG 106 (442)
T ss_dssp EEEEEEETTB----------SSCCBEEEETTCEEEEEEEECTTCSSCBCCEET--TCC--SGGGGGG------GCCBCTT
T ss_pred EEEEEEECCc----------CCCCcEEEeCCCEEEEEEEECCCCCCCCCEEec--CCc--CCCCCCc------cEEECCC
Confidence 4467999998 567899999999999999999753224454444 443 4688543 2359999
Q ss_pred ceEEEEEecCCCCceEEEEEEec------CCCceeeEEEEEcCCCCCCCCCCC----CCC---C----------------
Q psy16562 324 DRVDVIIHTNQSNNLYWMQAKTL------CDSITAEAVLQYEGEKLTYVSKRP----KSD---S---------------- 374 (445)
Q Consensus 324 eR~dv~v~~~~~~G~y~~~~~~~------~~~~~~~ail~y~~~~~~~~~~~P----~~~---~---------------- 374 (445)
++++|.|++++ +|+||||+|.. ..++.+..+++-...........+ ++. .
T Consensus 107 ~~~~y~f~~~~-~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~ 185 (442)
T 2zoo_A 107 HTSTFNFKALN-PGLYIYHCATAPVGMHIANGMYGLILVEPKEGLAPVDREYYLVQGDFYTKGEFGEAGLQPFDMAKAID 185 (442)
T ss_dssp CEEEEEEECCS-CEEEEEECCCSSHHHHHHTTCEEEEEEECTTCCCCCSEEEEEEEEEECBSSCTTCCEEECBCHHHHHT
T ss_pred CEEEEEEEcCC-CeEEEEecCCCChHHHHhCccEEEEEEeCCCCCCCCCceEEEEeeeeeccCcccccccccCChhHhcc
Confidence 99999999987 89999999742 366777666553221100000000 000 0
Q ss_pred CCCCCCCCCCCCCcc---ceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 375 FPRGKPKDNSPRVPM---HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 375 ~~~~~~~~~~~~~~~---~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
........|+...+. ..+.++.|+++||||+|++... .+.||||||.|+||+.||.+++|.++|++.|.|
T Consensus 186 ~~~~~~liNG~~~~~~~~~~l~v~~G~~vrlrliN~~~~~-~~~~~i~g~~~~vi~~DG~~~~p~~~~~~~l~p 258 (442)
T 2zoo_A 186 EDADYVVFNGSVGSTTDENSLTAKVGETVRLYIGNGGPNL-VSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPA 258 (442)
T ss_dssp TCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEEEESSC-CEEEEEETCCBSEEEGGGSSCEECSBSEEEECT
T ss_pred CCCCEEEECCCcCCCCCCCceEeCCCCEEEEEEEeCCCCC-ceeeEEcCCEEEEEecCCccCCCccceEEEECC
Confidence 000000123333321 3589999999999999997643 355699999999999999999999999999876
No 62
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.72 E-value=8.9e-18 Score=176.47 Aligned_cols=183 Identities=17% Similarity=0.226 Sum_probs=129.8
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCcee------------------EEEEecccceEEEc-
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACP------------------LIFTIEKHQLQVIA- 304 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~------------------~~~~i~gh~~~via- 304 (445)
....+++||+ .|+|+|++++|+++++++.|....... ...+||||++.+-.
T Consensus 45 ~~~~~~~NG~----------~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsiHwHGl~~~~~ 114 (513)
T 2wsd_A 45 PTRLWGYNGL----------FPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPDD 114 (513)
T ss_dssp CEEEEEETTB----------SSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCEEEETCCCCGG
T ss_pred CceEEEECCC----------ccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEEEcCCCcCCCc
Confidence 4578999998 788999999999999999999964100 14568999988764
Q ss_pred cCCCcceeeEecEEEecCC---ceEEEEEecCCCCceEEEEEEec-------CCCceeeEEEEEcCCCCCCCCCCCCCC-
Q psy16562 305 SDGTAVEPLVVDSVTLFPG---DRVDVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQYEGEKLTYVSKRPKSD- 373 (445)
Q Consensus 305 ~DG~~v~P~~~~~~~I~pG---eR~dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~~P~~~- 373 (445)
.||.+-. .+.+..|.|| ++++|.|.+++++|+||||+|.. +.++.+..||+-...... .+|..+
T Consensus 115 ~DG~p~~--~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~---~lp~~d~ 189 (513)
T 2wsd_A 115 SDGYPEA--WFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRL---KLPSDEY 189 (513)
T ss_dssp GSCCTTS--CBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGGG---CCCCGGG
T ss_pred cCCCCcc--cccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccccc---cCCCCCC
Confidence 5997642 2345578888 55599999887799999999985 256777766654322110 011100
Q ss_pred ---------------CC--CC--------------------CCCCCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEE
Q psy16562 374 ---------------SF--PR--------------------GKPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIF 416 (445)
Q Consensus 374 ---------------~~--~~--------------------~~~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~ 416 (445)
.+ .. .....|+... ..++++.+ +|||||+|++... .+.|
T Consensus 190 d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~--p~~~v~~~-~~RlRliNa~~~~-~~~~ 265 (513)
T 2wsd_A 190 DVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW--PYLEVEPR-KYRFRVINASNTR-TYNL 265 (513)
T ss_dssp EEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES--CEEECCSS-EEEEEEEECCSSC-CEEE
T ss_pred cEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc--ceEEecCC-EEEEEEEccCCcc-eEEE
Confidence 00 00 0000111111 24778775 8999999999876 6889
Q ss_pred EEeCe-eEEEEecCCccC-CCeEEeEEEecC
Q psy16562 417 TIEKH-QLQVIASDGTAV-EPLVVDSVTLFP 445 (445)
Q Consensus 417 hihgh-~f~Vi~~dG~~~-~p~~~Dtv~v~p 445 (445)
+|++| .|+||+.||.++ +|..+|++.|+|
T Consensus 266 ~i~~~~~~~via~DG~~~~~P~~~~~l~l~p 296 (513)
T 2wsd_A 266 SLDNGGDFIQIGSDGGLLPRSVKLNSFSLAP 296 (513)
T ss_dssp EETTCCCEEEEEETTEEEEEEEEESEEEECT
T ss_pred EECCCCeEEEEccCCCcccCceEeCeEEECC
Confidence 99999 999999999998 699999999976
No 63
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.71 E-value=2.1e-17 Score=177.32 Aligned_cols=177 Identities=17% Similarity=0.184 Sum_probs=121.5
Q ss_pred CCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeE---------------------------------
Q psy16562 245 PDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPL--------------------------------- 291 (445)
Q Consensus 245 ~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~--------------------------------- 291 (445)
...+.+||+ .|+|+|++++|+++++++.|.......+
T Consensus 53 t~~~gyNg~----------~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (612)
T 3gyr_A 53 TLMWGYDGQ----------VPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVA 122 (612)
T ss_dssp EEEEEETTB----------SSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSCSCTTCCCCHHHH
T ss_pred ceEEEECCc----------ccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCccccccccccccccccccc
Confidence 357899998 8899999999999999999998543221
Q ss_pred ----EEEecccceEEEc-cCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec-------CCCceeeEEEEEc
Q psy16562 292 ----IFTIEKHQLQVIA-SDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQYE 359 (445)
Q Consensus 292 ----~~~i~gh~~~via-~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~y~ 359 (445)
..+||||++.+-. .||+ .++.|.||++|+|.|.++|++|+||||+|.. .+++.+..||+-.
T Consensus 123 ~~~~~ttiHwHGl~~~~~~DGv-------~q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl~G~liI~d~ 195 (612)
T 3gyr_A 123 ALPAWSVTHLHGAQTGGGNDGW-------ADNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDD 195 (612)
T ss_dssp TCCCCBCEEEETCCCCTTTSCC-------GGGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTTCEEEEEEECH
T ss_pred cCCCCceEEcCCCccCCcccCc-------ccCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhccceeEEEEcCc
Confidence 2357888887643 4884 3677999999999999999889999999963 4777777666533
Q ss_pred CCCCCCCCCCCCCC----CCC-----------------------------CC-----------CCCCCCCCCccceeEee
Q psy16562 360 GEKLTYVSKRPKSD----SFP-----------------------------RG-----------KPKDNSPRVPMHFFKVQ 395 (445)
Q Consensus 360 ~~~~~~~~~~P~~~----~~~-----------------------------~~-----------~~~~~~~~~~~~~~~v~ 395 (445)
.+... .+|..+ .++ .. ....|+... ..+.++
T Consensus 196 ~~~~~---~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~--p~~~v~ 270 (612)
T 3gyr_A 196 EEDAL---GLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW--PYADVD 270 (612)
T ss_dssp HHHTT---TCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES--CEEEEE
T ss_pred ccccc---CCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc--ceEecc
Confidence 22111 011100 000 00 000111111 134554
Q ss_pred CCcEEEEEEEcCCCCccceEEEEeCee-------EEEEecCCccCC-CeEE------eEEEecC
Q psy16562 396 RDKRYLMRIIGGSCLACPLIFTIEKHQ-------LQVIASDGTAVE-PLVV------DSVTLFP 445 (445)
Q Consensus 396 ~G~~~~~rliN~s~~~Hp~~~hihgh~-------f~Vi~~dG~~~~-p~~~------Dtv~v~p 445 (445)
+++|||||||++... .|.|+|.+|. |+||+.||.+++ |+.+ +.|.|+|
T Consensus 271 -~~~yRlRliNas~~~-~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~p 332 (612)
T 3gyr_A 271 -DGWYRLRLVNASNAR-IYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAP 332 (612)
T ss_dssp -SSEEEEEEEECCSSC-CEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECT
T ss_pred -CcEEEEEEEeccCCc-ceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEecc
Confidence 568999999999887 6899999984 999999998874 5443 4677765
No 64
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.69 E-value=9.3e-18 Score=165.06 Aligned_cols=168 Identities=11% Similarity=0.015 Sum_probs=105.7
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEE-ccCCCcce----eeEecEEEecCCceEEEEEecCCCC--
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI-ASDGTAVE----PLVVDSVTLFPGDRVDVIIHTNQSN-- 336 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~vi-a~DG~~v~----P~~~~~~~I~pGeR~dv~v~~~~~~-- 336 (445)
.++|+|++++|+++++||+|.+.. .++||+|++.+. +.||.+.. +....++.|.|||+++|.|++++++
T Consensus 57 ~pGP~I~v~~Gd~v~v~~~N~l~~----~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp 132 (306)
T 1sdd_A 57 LLGPTLYAEVGDIMKVHFKNKAHK----PLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGP 132 (306)
T ss_dssp SCCCCEEEETTCEEEEEEEECSSS----CBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSC
T ss_pred ccCCEEEEeCCCEEEEEEEECCCC----cccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCC
Confidence 446899999999999999998864 345888888864 57998753 2233468999999999999998753
Q ss_pred -------ceEEEEEEec-----CCCceeeEEEEEcCCCCCCC-CCCC--CCCCCCC----CC---------CCCCCCCCc
Q psy16562 337 -------NLYWMQAKTL-----CDSITAEAVLQYEGEKLTYV-SKRP--KSDSFPR----GK---------PKDNSPRVP 388 (445)
Q Consensus 337 -------G~y~~~~~~~-----~~~~~~~ail~y~~~~~~~~-~~~P--~~~~~~~----~~---------~~~~~~~~~ 388 (445)
|+||||+|.. ..++.+..|+.-.+...... .... +...+.. .. -..|+....
T Consensus 133 ~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~d~~~~~~~~~~~~~~ING~~~~ 212 (306)
T 1sdd_A 133 THDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESKSWNQTSSLMYTVNGYVNG 212 (306)
T ss_dssp CSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEEETTSSSSCCCCEEECSSSCCSS
T ss_pred CCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEecccccccccCCCcceeeCCEecC
Confidence 6999999965 36677765554333211110 0001 1111111 00 113333321
Q ss_pred -cceeEeeCCcEEEEEEEcCCCC--ccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 389 -MHFFKVQRDKRYLMRIIGGSCL--ACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 389 -~~~~~v~~G~~~~~rliN~s~~--~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
...++++.|+++||||+|++.. .|+| |||||.|++ || ..+|++.|.|
T Consensus 213 ~~p~l~v~~G~~vrlrliN~g~~~~~h~~--hlhG~~~~~---dG-----~~~dtv~l~p 262 (306)
T 1sdd_A 213 TMPDITVCAHDHISWHLIGMSSGPELFSI--HFNGQVLEQ---NH-----HKISAITLVS 262 (306)
T ss_dssp CCCCCCCCCC------BBCCCSSSCEECC--BCSSTTCEE---TT-----EECSCCCEET
T ss_pred CCcceEEcCCCEEEEEEEeCCCCCccEEE--EECCcEeee---CC-----EEcceEEECC
Confidence 2357899999999999999875 4555 999999986 66 3466666654
No 65
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.69 E-value=4.2e-17 Score=176.08 Aligned_cols=171 Identities=9% Similarity=0.062 Sum_probs=110.0
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEE-EccCCCcce---e-eEecEEEecCCceEEEEEecCCC---
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQV-IASDGTAVE---P-LVVDSVTLFPGDRVDVIIHTNQS--- 335 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~v-ia~DG~~v~---P-~~~~~~~I~pGeR~dv~v~~~~~--- 335 (445)
.|+|+|++++|+++++||.|.+... .+||+|++.+ .+.||.+.. | ..+.++.|.||++++|.|++++.
T Consensus 66 ~pGP~I~~~~Gd~v~v~~~N~l~~~----~siH~HGl~~~~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp 141 (647)
T 1sdd_B 66 ILGPVIRAEVDDVIQVRFKNLASRP----YSLHAHGLSYEKSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGP 141 (647)
T ss_dssp TSCCCEEEETTCEEEEEECCCSSSC----BCCEEETCC---------------------CCBCTTCCEECCEECCTTTSC
T ss_pred CcCceEEEeCCCEEEEEEEECCCCc----eEEecCcceeCCCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCC
Confidence 7789999999999999999999753 4588888887 567997642 1 23458899999999999999884
Q ss_pred --Cc----eEEEEEEec-----CCCceeeEEEEEcCCCCC---CCCCCCCCCCCCC-------------C----------
Q psy16562 336 --NN----LYWMQAKTL-----CDSITAEAVLQYEGEKLT---YVSKRPKSDSFPR-------------G---------- 378 (445)
Q Consensus 336 --~G----~y~~~~~~~-----~~~~~~~ail~y~~~~~~---~~~~~P~~~~~~~-------------~---------- 378 (445)
+| +||||+|.. ..++.+..|+...+.... .+....+...++. .
T Consensus 142 ~~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~~ 221 (647)
T 1sdd_B 142 ENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASSE 221 (647)
T ss_dssp CSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC-------------
T ss_pred CCCCCCceEEEEccCCCCcccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCCcc
Confidence 47 999999984 477877766665433211 0000000000000 0
Q ss_pred ------CCCCCCCCCccceeEeeCCcEEEEEEEcCCCC--ccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 379 ------KPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCL--ACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 379 ------~~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~--~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
....|+...+...+++++|+++||||+|++.. .|+| |||||.|+|++.|| ..+|++.|.|
T Consensus 222 ~~~~~~~~~iNG~~~~~p~l~v~~G~~vrlrliN~~~~~~~h~~--hlhG~~f~vi~~d~-----~~~d~v~l~p 289 (647)
T 1sdd_B 222 VKNSHEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVV--HFHGQTLLENGTQQ-----HQLGVWPLLP 289 (647)
T ss_dssp --CCCEEEEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEE--EETTCCEEECSSSC-----EEESSEEECT
T ss_pred hhhcCceeccCCEecCCCCeEEcCCCEEEEEEEeCCCCCcceeE--EEcCcEEEEecCCC-----cccceEEECC
Confidence 00122332233468999999999999999864 5655 99999999998875 4677777765
No 66
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.69 E-value=5.3e-17 Score=172.88 Aligned_cols=178 Identities=17% Similarity=0.182 Sum_probs=131.1
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCcee---------------------------------
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACP--------------------------------- 290 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~--------------------------------- 290 (445)
....+.+||+ .|+|+|++++|+++++++.|.......
T Consensus 52 ~t~~~~ynG~----------~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~p~~~g~~~~~~~ 121 (612)
T 2g23_A 52 PTLMWGYDGQ----------VPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDV 121 (612)
T ss_dssp CEEEEEETTB----------SSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSCSCTTCCCCHHH
T ss_pred ceEEEEECCc----------cCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccccccccccccccc
Confidence 4578999998 788999999999999999999975211
Q ss_pred ----EEEEecccceEEEc-cCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec-------CCCceeeEEEEE
Q psy16562 291 ----LIFTIEKHQLQVIA-SDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQY 358 (445)
Q Consensus 291 ----~~~~i~gh~~~via-~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~y 358 (445)
-..++|+|++.+-. .||.+ ++.|.||++++|.|.+++++|+||||+|.. ..++.+..||+-
T Consensus 122 ~~~~~~tsiH~HG~~~~~~~DG~p-------~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~ 194 (612)
T 2g23_A 122 AALPAWSVTHLHGAQTGGGNDGWA-------DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRD 194 (612)
T ss_dssp HTCCCCBCEEEETCCCCTTTSCCG-------GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTTTCEEEEEEEC
T ss_pred cccCCceEEEcCCCCCCCccCCCC-------cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhccceeEEEEcC
Confidence 02568999988753 59964 446999999999999987799999999985 367777766653
Q ss_pred cCCCCCCCCCCCCCC----CCC-------C---------------------------------CCCCCCCCCCccceeEe
Q psy16562 359 EGEKLTYVSKRPKSD----SFP-------R---------------------------------GKPKDNSPRVPMHFFKV 394 (445)
Q Consensus 359 ~~~~~~~~~~~P~~~----~~~-------~---------------------------------~~~~~~~~~~~~~~~~v 394 (445)
..... ..+|..+ .++ . .....|+.. ...++|
T Consensus 195 ~~~~~---~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~--~p~~~V 269 (612)
T 2g23_A 195 DEEDA---LGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRI--WPYADV 269 (612)
T ss_dssp HHHHT---TTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEE--SCEEEE
T ss_pred ccccc---ccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCcc--CCeEEe
Confidence 32111 0111110 000 0 000112221 126899
Q ss_pred eCCcEEEEEEEcCCCCccceEEEEeCe-------eEEEEecCCccCC-CeEEe------EEEecC
Q psy16562 395 QRDKRYLMRIIGGSCLACPLIFTIEKH-------QLQVIASDGTAVE-PLVVD------SVTLFP 445 (445)
Q Consensus 395 ~~G~~~~~rliN~s~~~Hp~~~hihgh-------~f~Vi~~dG~~~~-p~~~D------tv~v~p 445 (445)
++| +|||||+|++... .|.|+|++| .|+||+.||.+++ |..+| +|.|+|
T Consensus 270 ~~g-~yRlRliNas~~r-~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~p 332 (612)
T 2g23_A 270 DDG-WYRLRLVNASNAR-IYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAP 332 (612)
T ss_dssp ESS-EEEEEEEECCSSC-CEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECT
T ss_pred cCC-eEEEEEEecCCCe-EEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECC
Confidence 999 9999999999887 689999999 8999999999995 89998 899876
No 67
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.67 E-value=3.4e-16 Score=156.13 Aligned_cols=179 Identities=14% Similarity=0.108 Sum_probs=116.0
Q ss_pred CCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecC
Q psy16562 243 IKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 322 (445)
Q Consensus 243 ~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~p 322 (445)
.....+++||+ .|+|+|++++|+++++|++|.+...+.+.+++|++.. +.||.++ + .|.|
T Consensus 57 ~~~~~~~~ng~----------~pgP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~~-----~--~i~P 116 (340)
T 2bw4_A 57 TEIHAMTFNGS----------VPGPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGAL-----T--QVNP 116 (340)
T ss_dssp CEEEEEEETTB----------SSCCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG-----C--CBCT
T ss_pred cEEEEEEECCC----------CCCCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCccc-----e--EeCC
Confidence 34578999998 6679999999999999999998432233333333221 1233222 2 3999
Q ss_pred CceEEEEEecCCCCceEEEEEEec-------CCCceeeEEEEEcCCCC----CCCC---CC----CCC------C-CCC-
Q psy16562 323 GDRVDVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQYEGEKL----TYVS---KR----PKS------D-SFP- 376 (445)
Q Consensus 323 GeR~dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~y~~~~~----~~~~---~~----P~~------~-~~~- 376 (445)
||+++|.|++++ +|+||||+|.. ..++.+..+++-..... .+.. .. .++ + .+.
T Consensus 117 G~~~~y~~~~~~-~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~g~~~~ 195 (340)
T 2bw4_A 117 GEETTLRFKATK-PGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPLTYDKIYYVGEQDFYVPKDEAGNYKK 195 (340)
T ss_dssp TEEEEEEEECCS-CEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEECCSEEEEEEEEEECCCBCTTSCBCC
T ss_pred CCEEEEEEECCC-CeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCcCcceeEEEeeeeeeeccccCCcccc
Confidence 999999999987 89999999963 36777765554332100 0000 00 000 0 000
Q ss_pred ----------------C---CCCCCCCCCCc---cceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCC
Q psy16562 377 ----------------R---GKPKDNSPRVP---MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE 434 (445)
Q Consensus 377 ----------------~---~~~~~~~~~~~---~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~ 434 (445)
. ..-..|+.... ...+++++|+++||++.|.+...|++ |+|+|.|+|++ ||.++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~~~~~l~v~~G~r~Rl~n~~~~~~~~~~--~i~gh~~~Vi~-dG~~~~ 272 (340)
T 2bw4_A 196 YETPGEAYEDAVKAMRTLTPTHIVFNGAVGALTGDHALTAAVGERVLVVHSQANRDTRPH--LIGGHGDYVWA-TGKFRN 272 (340)
T ss_dssp CCSHHHHHHHHHHHHHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEE--EETCCEEEEET-TCCTTS
T ss_pred cccccccccchhhHhhcCCCCEEEECCccCCccCCCceEcCCCCEEEEEECCCCCccceE--EecCcceEEeC-CCcccC
Confidence 0 00012333221 24689999999999888887777665 79999999997 888876
Q ss_pred C--eEEeEEEecC
Q psy16562 435 P--LVVDSVTLFP 445 (445)
Q Consensus 435 p--~~~Dtv~v~p 445 (445)
+ .++|+|.|.|
T Consensus 273 ~p~~~~dtv~l~p 285 (340)
T 2bw4_A 273 PPDLDQETWLIPG 285 (340)
T ss_dssp CCEEEESCCCBCT
T ss_pred CccccceEEEeCC
Confidence 4 3679988865
No 68
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.65 E-value=5.7e-16 Score=154.07 Aligned_cols=177 Identities=12% Similarity=0.066 Sum_probs=117.3
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCc-ceeeEecEEEecC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTA-VEPLVVDSVTLFP 322 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~-v~P~~~~~~~I~p 322 (445)
....+++||+ .|+|+|++++|+++++|+.|.+.. +|+|++.+-+.+|.. ..+ ++ .|.|
T Consensus 51 ~~~~~~~ng~----------~pgP~i~~~~Gd~v~v~~~N~~~~-------~h~Hg~~~~~~~~~~~~~~--~~--~i~P 109 (333)
T 1mzy_A 51 YLQAMTFDGS----------IPGPLMIVHEGDYVELTLINPPEN-------TMPHNIDFHAATGALGGGG--LT--LINP 109 (333)
T ss_dssp EEEEEEETTB----------SSCCEEEEETTCEEEEEEEECTTC-------CSCBCCEETTSCSGGGGGG--GC--CBCT
T ss_pred EEEEEEECCc----------cCCCcEEecCCCEEEEEEEECCCC-------cccccceecCCCCCCCCCc--ee--EeCC
Confidence 4568899998 677999999999999999999632 677887765543321 111 22 3999
Q ss_pred CceEEEEEecCCCCceEEEEEEec--------CCCceeeEEEEEcCCCCCCCCCCCCCC------------------CCC
Q psy16562 323 GDRVDVIIHTNQSNNLYWMQAKTL--------CDSITAEAVLQYEGEKLTYVSKRPKSD------------------SFP 376 (445)
Q Consensus 323 GeR~dv~v~~~~~~G~y~~~~~~~--------~~~~~~~ail~y~~~~~~~~~~~P~~~------------------~~~ 376 (445)
|++++|.|++++ +|+||||+|.. ..++.+..|+.-......+......++ .+.
T Consensus 110 G~~~~y~f~~~~-~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~g~~~ 188 (333)
T 1mzy_A 110 GEKVVLRFKATR-AGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYIPKDEDGTYM 188 (333)
T ss_dssp TEEEEEEEECCS-CEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBCTTSCBC
T ss_pred CCEEEEEEECCC-CEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeeccCcccccccc
Confidence 999999999987 89999999862 367777766653321100000000000 000
Q ss_pred ----------------CC-C---CCCCCCCCc---cceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccC
Q psy16562 377 ----------------RG-K---PKDNSPRVP---MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV 433 (445)
Q Consensus 377 ----------------~~-~---~~~~~~~~~---~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~ 433 (445)
.. . -..|+...+ ...+++++|+++||+++|.+...+++ +||+|.|+|++ ||.++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~~~~~~~l~v~~Ger~Rl~n~~~~~~~~~h--~i~~h~~~Vi~-dG~~~ 265 (333)
T 1mzy_A 189 RFSDPSEGYEDMVAVMDTLIPSHIVFNGAVGALTGEGALKAKVGDNVLFVHSQPNRDSRPH--LIGGHGDLVWE-TGKFH 265 (333)
T ss_dssp CCSSHHHHHHHHHHHHTTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEE--EETCCEEEEET-TCCTT
T ss_pred ccccccccccchhHHhhccCCcEEEECCcccccCCCcceEecCCCEEEEEECCCCCccccE--EECCCCeEEEe-CCccc
Confidence 00 0 012333221 23589999999988888876655433 57899999999 99998
Q ss_pred CC-e-EEeEEEecC
Q psy16562 434 EP-L-VVDSVTLFP 445 (445)
Q Consensus 434 ~p-~-~~Dtv~v~p 445 (445)
++ . ++|++.|.|
T Consensus 266 ~~p~~~~dtv~l~p 279 (333)
T 1mzy_A 266 NAPERDLETWFIRG 279 (333)
T ss_dssp SCCEEEESBCCBCT
T ss_pred CCCccCcceEEECC
Confidence 74 3 689998875
No 69
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.63 E-value=1.4e-16 Score=131.37 Aligned_cols=89 Identities=17% Similarity=0.296 Sum_probs=72.3
Q ss_pred CCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCC--CCCCCCCcccccCCCCCCceEEEEec-CCCcceEEec
Q psy16562 105 RQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVT--PWMDGVPMVTQCPIPSSTTFRYKFPA-MPSGTFFYHS 181 (445)
Q Consensus 105 g~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~--~~~DGvp~~tq~pI~pG~~~~Y~f~~-~~~GT~wYH~ 181 (445)
-+|++|+|++++||+|+ +.|.+. .++++||||..++.. ..+||.+ .+++.|.||++++|.|.+ .++|+|||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~-~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C 89 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKL-PPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYC 89 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSS-CCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEEC
T ss_pred cEEeCCEEEEcCCCEEE--EEECCC-CCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEe
Confidence 36889999999999975 679976 789999999876431 0133332 356789999999999999 5999999999
Q ss_pred ccchhhhcCceeEEEEeC
Q psy16562 182 HVGLQKMDGLEGSMIIRT 199 (445)
Q Consensus 182 H~~~q~~~Gl~G~lIV~~ 199 (445)
| .|...||.|.|+|++
T Consensus 90 ~--~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 90 A--PHRGAGMVGKITVEG 105 (105)
T ss_dssp T--TTGGGTCEEEEEECC
T ss_pred C--CchhcCCEEEEEEcC
Confidence 9 577889999999964
No 70
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.62 E-value=2.7e-15 Score=149.28 Aligned_cols=178 Identities=12% Similarity=0.109 Sum_probs=115.0
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPG 323 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pG 323 (445)
....+++||+ .|+|+|++++|+++++|+.|.+...+.+.+++|++.. +.||..+ + .|.||
T Consensus 52 ~~~~~~~ng~----------~pgP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~---~~~~~~~-----~--~i~pG 111 (336)
T 1oe1_A 52 TLQAMTFNGS----------MPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG---ALGGAKL-----T--NVNPG 111 (336)
T ss_dssp EEEEEEETTB----------SSCCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG-----C--CBCTT
T ss_pred EEEEEEECCc----------cCCCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC---CCCCcce-----E--EeCCC
Confidence 4578999998 6789999999999999999997543455666666542 2233222 2 39999
Q ss_pred ceEEEEEecCCCCceEEEEEEec-------CCCceeeEEEEEcCCCCCCCCCCCCCC------------------CC---
Q psy16562 324 DRVDVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQYEGEKLTYVSKRPKSD------------------SF--- 375 (445)
Q Consensus 324 eR~dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~~P~~~------------------~~--- 375 (445)
++++|.|++++ +|+||||+|.. ..++.+..|++.......+......++ .+
T Consensus 112 ~~~~y~f~~~~-~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~~~~g~~~~~ 190 (336)
T 1oe1_A 112 EQATLRFKADR-SGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPKGPDGKYKDY 190 (336)
T ss_dssp EEEEEEEECCS-CEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBCTTSSBCCC
T ss_pred CEEEEEEECCC-CeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeeccccCCceeec
Confidence 99999999987 89999999963 367777767664332110000000000 00
Q ss_pred CC-----------------CCCCCCCCCCc---cceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCC
Q psy16562 376 PR-----------------GKPKDNSPRVP---MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEP 435 (445)
Q Consensus 376 ~~-----------------~~~~~~~~~~~---~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p 435 (445)
.. .....|+.... ...+++++|+++||+..+.+...++ ++||+|.|+|++ ||.+++|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~l~v~~GervRlin~~~~~~~~~--~~i~gh~~~Vi~-DG~~~~p 267 (336)
T 1oe1_A 191 ATLAESYGDTVQVMRTLTPSHIVFNGKVGALTGANALTAKVGETVLLIHSQANRDTRP--HLIGGHGDWVWE-TGKFANP 267 (336)
T ss_dssp SSTGGGHHHHHHHHHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCE--EETTCCEEEEET-TCCTTSC
T ss_pred ccccccccchhhHhhcCCCCEEEECCeeccCCCCcceEcCCCCEEEEEecCCCCccce--EEECCcCceEeC-CCcCcCC
Confidence 00 00012222221 2468999999887755554444433 256999999997 9999886
Q ss_pred e--EEeEEEecC
Q psy16562 436 L--VVDSVTLFP 445 (445)
Q Consensus 436 ~--~~Dtv~v~p 445 (445)
. ++|++.|.|
T Consensus 268 ~~~~~dtv~i~p 279 (336)
T 1oe1_A 268 PQRDLETWFIRG 279 (336)
T ss_dssp CEEEESBCCBCT
T ss_pred ccccceEEEECC
Confidence 3 468888765
No 71
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.56 E-value=8.4e-16 Score=167.86 Aligned_cols=167 Identities=7% Similarity=0.061 Sum_probs=115.2
Q ss_pred CcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEcc--CCCcceeeEecEEEecCCceEEEEEecCC------
Q psy16562 263 RVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIAS--DGTAVEPLVVDSVTLFPGDRVDVIIHTNQ------ 334 (445)
Q Consensus 263 ~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~--DG~~v~P~~~~~~~I~pGeR~dv~v~~~~------ 334 (445)
..|+|+|+++.|++++++|.|.+... .+||+|++.+-.. ||++- .++.|.||++++|.+++++
T Consensus 195 ~~pGP~Ir~~~GD~v~v~~~N~l~~~----~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~ 265 (770)
T 2r7e_B 195 GLLGPYIRAEVEDNIMVTFRNQASRP----YSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTK 265 (770)
T ss_dssp CSCCCCCCCCSSSCEEEEEECCSSSC----CCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCS
T ss_pred CCCCCeEEEEcCCEEEEEEEECCCCC----cceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCcc
Confidence 37889999999999999999998652 3588888776532 48642 4678999999999999985
Q ss_pred ---CCceEEEEEEec-----CCCceeeEEEEEcCCCCCC---CCCCCCCCCC----------------------CC----
Q psy16562 335 ---SNNLYWMQAKTL-----CDSITAEAVLQYEGEKLTY---VSKRPKSDSF----------------------PR---- 377 (445)
Q Consensus 335 ---~~G~y~~~~~~~-----~~~~~~~ail~y~~~~~~~---~~~~P~~~~~----------------------~~---- 377 (445)
++|+||||+|.. ..++.+..|+.-.+..... ....-++..+ +.
T Consensus 266 ~d~~~Gt~wYHsh~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~~~~~~p~~~~~ 345 (770)
T 2r7e_B 266 DEFDCKAWAYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENMERNCRAPCNIQM 345 (770)
T ss_dssp SCCSEEEEEECCCSSSSHHHHTSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGSSCSCCSSCCCS
T ss_pred CCCCCeeEEeeccCCcHHHHhCCceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchhhcccCcccccc
Confidence 579999999986 2667776665543321100 0000000000 00
Q ss_pred ---------CCCCCCCCCC-ccceeEeeCCcEEEEEEEcCCCC--ccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 378 ---------GKPKDNSPRV-PMHFFKVQRDKRYLMRIIGGSCL--ACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 378 ---------~~~~~~~~~~-~~~~~~v~~G~~~~~rliN~s~~--~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
..-..|+... ....++++.|+++||||+|++.+ .||| |||||.|+|++.||. ++|||.|.|
T Consensus 346 ~d~~~~~~~~~~~ING~~~~~~~~l~v~~Ge~vr~rliN~g~~~~~H~f--HlhGh~f~Vv~~dg~-----~~Dtv~l~P 418 (770)
T 2r7e_B 346 EDPTFKENYRFHAINGYIMDTLPGLVMAQDQRIRWYLLSMGSNENIHSI--HFSGHVFTVRKKEEY-----KMALYNLYP 418 (770)
T ss_dssp SSSSSTTTSCEECTTSCTTTTCCCCCCCSSSCEEEECCCCCSSSCCCEE--EBSSCCEECCSSSCC-----EESEEECCT
T ss_pred CCccccccCCccccCCccCCCCCCeEEeCCCEEEEEEEeCCCCcceEEE--EEcCCEEEEEecCCc-----eeeEEEECC
Confidence 0001222222 12357899999999999999764 6776 999999999999873 888988876
No 72
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.49 E-value=4.7e-14 Score=124.55 Aligned_cols=94 Identities=15% Similarity=0.245 Sum_probs=72.1
Q ss_pred EEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCC------CCcc-cccCCCCCC--ceEEEEe
Q psy16562 100 ILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDG------VPMV-TQCPIPSST--TFRYKFP 170 (445)
Q Consensus 100 ~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DG------vp~~-tq~pI~pG~--~~~Y~f~ 170 (445)
-..++|. ++|+|+|++||+|++++.|... ...|++.+.+.++++.+. .++. ....|.||+ +++|.|+
T Consensus 52 ~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~---~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft 127 (154)
T 2cal_A 52 SFEVHDK-KNPTLEIPAGATVDVTFINTNK---GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWH 127 (154)
T ss_dssp CEEETTE-ESCEEEECTTCEEEEEEEECCT---TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEEC
T ss_pred cccccCC-CCCEEEEeCCCEEEEEEEcCCC---CeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEE
Confidence 3455665 6899999999999999999732 456777777655544321 0010 001689999 9999999
Q ss_pred cCCCcceEEecccchhhhcCceeEEEEe
Q psy16562 171 AMPSGTFFYHSHVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 171 ~~~~GT~wYH~H~~~q~~~Gl~G~lIV~ 198 (445)
+ ++||||||||...|..+||+|.|+|+
T Consensus 128 ~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 128 P-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp C-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred E-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 9 99999999999889999999999984
No 73
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.40 E-value=8.3e-13 Score=110.12 Aligned_cols=92 Identities=23% Similarity=0.224 Sum_probs=73.5
Q ss_pred CCCeEEEE-EEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEec
Q psy16562 93 ADGFERAI-LSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPA 171 (445)
Q Consensus 93 ~dG~~~~~-~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~ 171 (445)
.+|..... ..+|++|++|.|++++||+|++++.|... . +||+.... .|. +..+.||++++|.|++
T Consensus 20 ~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~-~-----~H~~~i~~----~~~----~~~i~pG~~~~~~f~~ 85 (112)
T 1iby_A 20 VEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSP-I-----SEGFSIDA----FGV----QEVIKAGETKTISFTA 85 (112)
T ss_dssp ETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSS-S-----CEEEEEGG----GTE----EEEECTTCEEEEEEEC
T ss_pred eccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCC-C-----eEEEEEcC----CCc----eeEeCCCCEEEEEEEC
Confidence 45665555 58999999999999999999999999975 2 67776543 132 4579999999999999
Q ss_pred CCCcceEEecccchhhhcCceeEEEEeC
Q psy16562 172 MPSGTFFYHSHVGLQKMDGLEGSMIIRT 199 (445)
Q Consensus 172 ~~~GT~wYH~H~~~q~~~Gl~G~lIV~~ 199 (445)
.++|+||||||...+.. +|.|.|+|.+
T Consensus 86 ~~~G~y~~~C~~~~~~~-~M~g~i~V~~ 112 (112)
T 1iby_A 86 DKAGAFTIWCQLHPKNI-HLPGTLNVVE 112 (112)
T ss_dssp CSCEEEEEBCSSSCTTT-BCCEEEEEEC
T ss_pred CCCEEEEEECCCCCchH-HCEEEEEEeC
Confidence 99999999998654433 3999999964
No 74
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.33 E-value=2.5e-12 Score=135.42 Aligned_cols=94 Identities=22% Similarity=0.273 Sum_probs=76.7
Q ss_pred CCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCC
Q psy16562 94 DGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMP 173 (445)
Q Consensus 94 dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~ 173 (445)
++++..+|++|++||+|+|+|++||+|++.++|.+..... +||+.... .|+ ++.|.||++++|.|++.+
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv---~Hgf~ip~----~gv----~~~i~PG~t~t~~Fta~~ 565 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL---THGFTMGN----YGV----AMEIGPQMTSSVTFVAAN 565 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC---CEEEEETT----TTE----EEEECTTCEEEEEEECCS
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc---eeeEEecC----CCc----ceeeCCCCeEEEEEECCC
Confidence 5678899999999999999999999999999998652111 47776543 232 247999999999999999
Q ss_pred CcceEEeccc---chhhhcCceeEEEEeCC
Q psy16562 174 SGTFFYHSHV---GLQKMDGLEGSMIIRTP 200 (445)
Q Consensus 174 ~GT~wYH~H~---~~q~~~Gl~G~lIV~~~ 200 (445)
+|+||||||. ..|. ||+|.|+|+++
T Consensus 566 pGtY~yhC~e~Cg~~H~--gM~G~IiV~p~ 593 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHM--EMRGRMLVEPK 593 (595)
T ss_dssp CEEEEEECCSCCSTTCT--TCEEEEEEECC
T ss_pred CEEEEEECCCCCCCCcc--CCEEEEEEEcC
Confidence 9999999993 2443 99999999865
No 75
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.18 E-value=1.1e-10 Score=96.18 Aligned_cols=80 Identities=18% Similarity=0.284 Sum_probs=64.7
Q ss_pred ECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecc
Q psy16562 103 INRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSH 182 (445)
Q Consensus 103 ~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H 182 (445)
-+..|-.+.|+|++||+|+ +.|... .++++|+++. +||.....+..|.||++++|.| .++|+|||||+
T Consensus 26 ~~~~F~P~~i~v~~Gd~V~--~~N~d~-~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf--~~~G~y~y~C~ 93 (105)
T 2ov0_A 26 AKMKYETPELHVKVGDTVT--WINREA-MPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF--TEAGTYDYHCT 93 (105)
T ss_dssp ETTEESSSEEEECTTCEEE--EEECSS-SCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE--CSCEEEEEECS
T ss_pred eecEEcCCEEEECCCCEEE--EEECCC-CCEEEEEcCC-------CCCcccccccccCCCCEEEEEe--CCCEEEEEEeC
Confidence 4667888999999999965 568876 6888888852 3666655666799999999988 68999999998
Q ss_pred cchhhhcCceeEEEEe
Q psy16562 183 VGLQKMDGLEGSMIIR 198 (445)
Q Consensus 183 ~~~q~~~Gl~G~lIV~ 198 (445)
... ||.|.|+|+
T Consensus 94 ~H~----gM~G~i~V~ 105 (105)
T 2ov0_A 94 PHP----FMRGKVVVE 105 (105)
T ss_dssp SCT----TCEEEEEEC
T ss_pred CCC----CCEEEEEEC
Confidence 632 999999984
No 76
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=99.00 E-value=7.6e-10 Score=90.87 Aligned_cols=82 Identities=15% Similarity=0.274 Sum_probs=61.3
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCC----cccccCCCCCCceEEEEec-CCCcceEEeccc
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVP----MVTQCPIPSSTTFRYKFPA-MPSGTFFYHSHV 183 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp----~~tq~pI~pG~~~~Y~f~~-~~~GT~wYH~H~ 183 (445)
-+.|++++||+|++ .|... .++++|.|+...+. .+|.. ..+.-.+.||++++|.|++ .++|+||||||
T Consensus 19 P~~i~v~~Gd~V~~--~n~~~-~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~- 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNNKV-PPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE- 91 (106)
T ss_dssp SSEEEECTTCEEEE--EECSS-SCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT-
T ss_pred CCEEEECCCCEEEE--EECCC-CCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC-
Confidence 37999999998754 58764 57888888754321 22320 0122358999999999988 69999999999
Q ss_pred chhhhcCceeEEEEe
Q psy16562 184 GLQKMDGLEGSMIIR 198 (445)
Q Consensus 184 ~~q~~~Gl~G~lIV~ 198 (445)
.|...||.|.|+|.
T Consensus 92 -~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 92 -PHRGAGMVGKITVA 105 (106)
T ss_dssp -TTGGGTCEEEEEEC
T ss_pred -ChhhcCcEEEEEEc
Confidence 67778999999996
No 77
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.88 E-value=7.4e-09 Score=89.44 Aligned_cols=91 Identities=14% Similarity=0.163 Sum_probs=66.1
Q ss_pred CCCCCeEEEEcCCEEEEEEEecCCCC-CceEeeCCccc--------C----C--CCC-CCCCCc--ccccCCCCCCceEE
Q psy16562 106 QLPGPSIQVCKGDTIIVDVKNHMIDR-EVTLHWHGVYQ--------K----V--TPW-MDGVPM--VTQCPIPSSTTFRY 167 (445)
Q Consensus 106 ~~PGPtI~v~~GD~v~V~v~N~l~~~-~tsiHwHG~~~--------~----~--~~~-~DGvp~--~tq~pI~pG~~~~Y 167 (445)
.|--+.|+|++||+|+++|+|... . +++++.|+... . + ..+ -++.+. ...-.|.||+++++
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~-~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v 109 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSA-VQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEV 109 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCS-SCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCC-CCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEE
Confidence 455579999999999999999865 5 67777776321 0 0 000 001010 01124899999999
Q ss_pred EEecCCCcceEEecccchhhhcCceeEEEEe
Q psy16562 168 KFPAMPSGTFFYHSHVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 168 ~f~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~ 198 (445)
.|+++++|+|+||||...|.. ||.|.|+|+
T Consensus 110 ~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 110 TFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 999999999999999887888 999999984
No 78
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.78 E-value=1.8e-08 Score=81.90 Aligned_cols=85 Identities=14% Similarity=0.156 Sum_probs=65.4
Q ss_pred EEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcce
Q psy16562 98 RAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTF 177 (445)
Q Consensus 98 ~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~ 177 (445)
..+-.-|..|=-..|+++.||+|++.+.|... ..+++...+.... -.+.||++.+|.|++.++|+|
T Consensus 16 v~V~~~~~~F~P~~i~v~~G~tV~~~~~n~d~-~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~~~~G~Y 81 (100)
T 4hci_A 16 IEVELNDDYFNPNVITIPINESTTLLLKNKGK-SEHTFTIKKLGID-------------VVVESGKEKNITVKPKSAGTY 81 (100)
T ss_dssp EEEEEETTEEESSEEEECTTSCEEEEEEECSS-SCEEEEEGGGTEE-------------EEECTTCEEEEEECCCSCEEE
T ss_pred EEEEEECCEEeCCEEEECCCCEEEEEEEcCCC-ceEEEEEecCCcc-------------eeecCCcceeEEEecccCceE
Confidence 34444466665568999999999999999865 4555554443211 147899999999999999999
Q ss_pred EEecccchhhhcCceeEEEEe
Q psy16562 178 FYHSHVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 178 wYH~H~~~q~~~Gl~G~lIV~ 198 (445)
.|+|. .|...||.|.|||+
T Consensus 82 ~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 82 ELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp EEECT--TTGGGTCEEEEEEC
T ss_pred EEECc--cccCCCCEEEEEEC
Confidence 99996 46678999999995
No 79
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.73 E-value=1.7e-08 Score=81.41 Aligned_cols=80 Identities=13% Similarity=0.167 Sum_probs=58.5
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCC-CcccccCCCCCCceEEEEecCCCcceEEecccchhhh
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGV-PMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKM 188 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGv-p~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~ 188 (445)
+.|++++||+|+ +.|... .++++|+|+...+. ..|.. ...+.-.+.||+++++.|. ++|+|+|||+ .|..
T Consensus 18 ~~i~v~~G~~V~--~~n~~~-~~H~~~~~~~~~p~--~~~~~~~~~~~~~~~pG~~~~~tf~--~~G~y~y~C~--~H~~ 88 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAG-FPHNIVFDEDAIPS--GVNADAISRDDYLNAPGETYSVKLT--AAGEYGYYCE--PHQG 88 (98)
T ss_dssp SEEEECTTCEEE--EEECSS-CCEEEEECGGGSCT--TCCHHHHCEEEEECSTTCEEEEECC--SCEEEEEECG--GGGG
T ss_pred CEEEECCCCEEE--EEECCC-CceEEEEeCCCCCC--ccccccccccceecCCCCEEEEEeC--CCeEEEEEcC--Cccc
Confidence 689999999876 578864 68999999864321 11100 0011225899999999875 8999999999 5777
Q ss_pred cCceeEEEEe
Q psy16562 189 DGLEGSMIIR 198 (445)
Q Consensus 189 ~Gl~G~lIV~ 198 (445)
.||.|.|+|+
T Consensus 89 ~gM~G~i~V~ 98 (98)
T 2plt_A 89 AGMVGKIIVQ 98 (98)
T ss_dssp GTCEEEEEEC
T ss_pred cCCeEEEEEC
Confidence 7999999984
No 80
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.66 E-value=2.5e-07 Score=79.81 Aligned_cols=92 Identities=12% Similarity=0.165 Sum_probs=65.6
Q ss_pred CCCCCeEEEEcCCEEEEEEEe--cCCCCCceEeeCCc------------ccC----CCCCCCCCCcc-cccCCCCCCceE
Q psy16562 106 QLPGPSIQVCKGDTIIVDVKN--HMIDREVTLHWHGV------------YQK----VTPWMDGVPMV-TQCPIPSSTTFR 166 (445)
Q Consensus 106 ~~PGPtI~v~~GD~v~V~v~N--~l~~~~tsiHwHG~------------~~~----~~~~~DGvp~~-tq~pI~pG~~~~ 166 (445)
+|--+.|+|+.||+|++++.| ... ..++++.++. ... ..+..|....+ .--.|.||++.+
T Consensus 29 ~F~P~~i~v~~G~tV~~~~~N~~~~~-~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~ 107 (140)
T 1qhq_A 29 AFAQTSLSLPANTVVRLDFVNQNNLG-VQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGS 107 (140)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCSSC-CCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEE
T ss_pred eEeCCeEEECCCCEEEEEEECCCCCC-CceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeE
Confidence 455579999999999999999 544 5666666631 000 00000100000 012579999999
Q ss_pred EEEecCCCcceEEecccchhhhcCceeEEEEe
Q psy16562 167 YKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 167 Y~f~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~ 198 (445)
+.|++..+|+|||||+...|...||.|.|+|.
T Consensus 108 ~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 108 VTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 99999999999999998888888999999996
No 81
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.65 E-value=7.1e-08 Score=76.53 Aligned_cols=74 Identities=19% Similarity=0.323 Sum_probs=55.5
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhh
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKM 188 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~ 188 (445)
-+.|+++.||+|++ .|... .++++|.++.. ++. .....+.||+++++.| .++|+|||||+ .+..
T Consensus 18 P~~i~v~~Gd~V~~--~n~~~-~~H~v~~~~~~----~~~-----~~~~~~~~g~~~~~~f--~~~G~y~~~C~--~H~~ 81 (91)
T 1bxv_A 18 PSTIEIQAGDTVQW--VNNKL-APHNVVVEGQP----ELS-----HKDLAFSPGETFEATF--SEPGTYTYYCE--PHRG 81 (91)
T ss_dssp SSEEEECTTCEEEE--EECSS-CCEEEEETTCG----GGC-----EEEEECSTTCEEEEEC--CSCEEEEEECT--TTGG
T ss_pred CCEEEECCCCEEEE--EECCC-CCcEEEEeCCC----ccC-----cccceeCCCCEEEEEe--CCCEEEEEEeC--CCcc
Confidence 46899999999864 57654 57888887621 010 1223589999988877 78999999999 5666
Q ss_pred cCceeEEEEe
Q psy16562 189 DGLEGSMIIR 198 (445)
Q Consensus 189 ~Gl~G~lIV~ 198 (445)
.||.|.|+|+
T Consensus 82 ~gM~g~i~V~ 91 (91)
T 1bxv_A 82 AGMVGKIVVQ 91 (91)
T ss_dssp GTCEEEEEEC
T ss_pred CCCEEEEEEC
Confidence 7999999984
No 82
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.64 E-value=7.9e-08 Score=77.54 Aligned_cols=81 Identities=11% Similarity=0.222 Sum_probs=57.2
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhh
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKM 188 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~ 188 (445)
-+.|++++||+|++ .|... .++++|.++...++. .+++.. .....+.||+++++.| .++|+|+|||+ .|..
T Consensus 18 P~~i~v~~G~~V~~--~n~~~-~~H~~~~~~~~~pg~-~~~~~~-~~~~~~~pG~~~~~tf--~~~G~y~~~C~--~H~~ 88 (98)
T 1pcs_A 18 PSTVTIKAGEEVKW--VNNKL-SPHNIVFDADGVPAD-TAAKLS-HKGLLFAAGESFTSTF--TEPGTYTYYCE--PHRG 88 (98)
T ss_dssp SSEEEECTTCEEEE--EECSS-CCEEEEECCSSSCHH-HHHHHC-EEEEECSTTCEEEEEC--CSCEEEEEECG--GGTT
T ss_pred CCEEEECCCCEEEE--EECCC-CCcEEEEeCCCCCcc-cccccc-ccccccCCCCEEEEEc--CCCeEEEEEcC--Cccc
Confidence 36899999998764 57754 578888876432100 000000 1123589999999988 68999999999 6777
Q ss_pred cCceeEEEEe
Q psy16562 189 DGLEGSMIIR 198 (445)
Q Consensus 189 ~Gl~G~lIV~ 198 (445)
.||.|.|+|+
T Consensus 89 ~gM~G~i~V~ 98 (98)
T 1pcs_A 89 AGMVGKVVVE 98 (98)
T ss_dssp TTCEEEEEEC
T ss_pred cCCeEEEEEC
Confidence 8999999984
No 83
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.61 E-value=1.2e-07 Score=79.97 Aligned_cols=75 Identities=13% Similarity=0.112 Sum_probs=52.9
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhhc
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMD 189 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~~ 189 (445)
..|+|++||+|++.+.| . + |++......+-+|.... -+.||++++|.| .++|+|||+|. .|...
T Consensus 21 ~~i~V~~GdtV~f~~~~--~--~-----H~v~~~~~~~P~g~~~f---~~~pg~t~s~TF--~~pG~y~y~C~--~H~~~ 84 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTD--K--S-----HNVEAIKEILPEGVESF---KSKINESYTLTV--TEPGLYGVKCT--PHFGM 84 (123)
T ss_dssp SEEEECTTEEEEEEESS--T--T-----CCCEECTTSSCTTCCCC---BCCTTCCEEEEE--CSCEEEEEECG--GGTTT
T ss_pred CEEEECCCCEEEEEECC--C--C-----ceEEEcCCcCCCCccce---ecCCCCEEEEEe--CCCeEEEEEeC--CCCcC
Confidence 68999999997776665 2 2 33332211122343111 357899998888 58999999998 67778
Q ss_pred CceeEEEEeCC
Q psy16562 190 GLEGSMIIRTP 200 (445)
Q Consensus 190 Gl~G~lIV~~~ 200 (445)
||.|.|+|.++
T Consensus 85 GM~G~I~V~~~ 95 (123)
T 3erx_A 85 GMVGLVQVGDA 95 (123)
T ss_dssp TCEEEEEESSS
T ss_pred CcEEEEEECCC
Confidence 99999999863
No 84
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.58 E-value=1.2e-07 Score=80.52 Aligned_cols=77 Identities=16% Similarity=0.216 Sum_probs=52.7
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhh
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKM 188 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~ 188 (445)
-+.|+|++||+|.+.+.|. + |++.......-+|.... -+.||++++|.| ..+|+|||||. .|..
T Consensus 22 P~~i~V~~GDtVtf~n~~~----~-----H~v~~~~~~~P~g~~~f---~s~pGet~s~TF--~~pG~y~y~C~--~H~~ 85 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK----G-----HNSALMKGGAPEGAETW---KGKINEEITVTL--SKPGVYMYQCA--PHVG 85 (127)
T ss_dssp SSEEEECTTCEEEEECSSS----S-----CCCEECTTCSCTTCCCC---BCCTTCCCEEEC--CSCEEEEEECT--TTGG
T ss_pred CCEEEECCCCEEEEEECCC----C-----ceEEEccCcCCCCccce---ecCCCCEEEEEe--CCCeEEEEEeC--CCCc
Confidence 3799999999976555442 2 44432211112332111 357999988888 68999999998 4677
Q ss_pred cCceeEEEEeCCC
Q psy16562 189 DGLEGSMIIRTPK 201 (445)
Q Consensus 189 ~Gl~G~lIV~~~~ 201 (445)
.||.|.|+|.++.
T Consensus 86 ~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 86 MGMIGAIVVGEPA 98 (127)
T ss_dssp GTCEEEEEESSCT
T ss_pred CCcEEEEEECcCC
Confidence 8999999998763
No 85
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.55 E-value=1.2e-07 Score=76.24 Aligned_cols=77 Identities=14% Similarity=0.330 Sum_probs=54.9
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcc--cccCCCCCCceEEEEecCCCcceEEecccchhh
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMV--TQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQK 187 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~--tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~ 187 (445)
+.|++++||+| ++.|... .+++++.++... .+|...+ ..-.+.||+++++.| .++|+|+|||+ .|.
T Consensus 19 ~~i~v~~G~~V--~~~n~~~-~~H~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~tf--~~~G~y~y~C~--~H~ 86 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKV-GPHNVIFDKVPA-----GESAPALSNTKLAIAPGSFYSVTL--GTPGTYSFYCT--PHR 86 (97)
T ss_dssp SEEEECTTCEE--EEEECSS-CCCCBEEEECCT-----TSCHHHHCBCCCCCSCSCCEEEEC--CSCSEEEEECS--STT
T ss_pred CEEEECCCCEE--EEEECCC-CCeEEEEeCCCC-----ccccccccccceecCCCCEEEEEe--CCCeEEEEEcc--Chh
Confidence 68999999986 5568653 466666665432 1121110 112578999999887 78999999999 666
Q ss_pred hcCceeEEEEe
Q psy16562 188 MDGLEGSMIIR 198 (445)
Q Consensus 188 ~~Gl~G~lIV~ 198 (445)
..||.|.|+|+
T Consensus 87 ~~gM~G~i~V~ 97 (97)
T 1b3i_A 87 GAGMVGTITVE 97 (97)
T ss_dssp TTTCEEEEEEC
T ss_pred hcCCEEEEEEC
Confidence 77999999984
No 86
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.49 E-value=2.8e-07 Score=74.82 Aligned_cols=80 Identities=13% Similarity=0.140 Sum_probs=54.7
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCC-----CCCCCcc--cccCCCCCCceEEEEecCCCcceEEec
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPW-----MDGVPMV--TQCPIPSSTTFRYKFPAMPSGTFFYHS 181 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~-----~DGvp~~--tq~pI~pG~~~~Y~f~~~~~GT~wYH~ 181 (445)
-+.|+|++||+|+ +.|... .+++++.+.- .... ++..+.+ +.-.+.||+++++.| .++|+|+|||
T Consensus 16 P~~i~v~~G~tV~--~~n~~~-~~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf--~~~G~y~y~C 87 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVGE-TGHNIVFDIP---AGAPGTVASELKAASMDENDLLSEDEPSFKAKV--STPGTYTFYC 87 (102)
T ss_dssp SSEEEECTTCCEE--EEECSS-SCBCCEECCC---TTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC--CSCEEEEEEC
T ss_pred CCEEEECCCCEEE--EEECCC-CCeEEEEeCc---ccccccccchhhcccccccceecCCCCEEEEEe--CCCeEEEEEe
Confidence 3689999999976 568754 4666666621 0000 0000111 122478999988877 7899999999
Q ss_pred ccchhhhcCceeEEEEe
Q psy16562 182 HVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 182 H~~~q~~~Gl~G~lIV~ 198 (445)
+ .|...||.|.|+|+
T Consensus 88 ~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 88 T--PHKSANMKGTLTVK 102 (102)
T ss_dssp S--TTGGGTCEEEEEEC
T ss_pred C--CCcccCCeEEEEEC
Confidence 9 77778999999984
No 87
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.48 E-value=5.4e-07 Score=76.04 Aligned_cols=75 Identities=15% Similarity=0.123 Sum_probs=53.0
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhhc
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMD 189 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~~ 189 (445)
..|+|++||+|. ++|.. .++++..+... .-+|... --+.||++|+|.| +.+|+|+|||- .|...
T Consensus 22 ~~i~V~~GDTV~--f~n~~--~~Hnv~~~~~~-----~p~g~~~---~~~~pg~t~s~TF--~~~G~y~Y~C~--~H~~~ 85 (124)
T 3ef4_A 22 GFVKVEAGDTVK--FVPTD--KSHNAESVREV-----WPEGVAP---VKGGFSKEVVFNA--EKEGLYVLKCA--PHYGM 85 (124)
T ss_dssp SEEEECTTCEEE--EECSS--SSCCCEECTTT-----SCTTSCC---CBCCTTCCEEEEC--CSSEEEEEECT--TTGGG
T ss_pred CEEEECCCCEEE--EEECC--CCccEEEeCCc-----CCCCccc---cccCCCCEEEEEe--CCCeEEEEEcC--CCCcC
Confidence 699999999975 55553 24455444211 1233221 1367999988888 58999999995 67778
Q ss_pred CceeEEEEeCC
Q psy16562 190 GLEGSMIIRTP 200 (445)
Q Consensus 190 Gl~G~lIV~~~ 200 (445)
||.|.|+|.+|
T Consensus 86 GM~G~I~V~~p 96 (124)
T 3ef4_A 86 GMVVLVQVGKP 96 (124)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEECCC
Confidence 99999999875
No 88
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.48 E-value=5.1e-07 Score=72.86 Aligned_cols=77 Identities=13% Similarity=0.187 Sum_probs=56.1
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCc------ccccCCCCCCceEEEEecCCCcceEEeccc
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM------VTQCPIPSSTTFRYKFPAMPSGTFFYHSHV 183 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~------~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~ 183 (445)
+.|++++||+|+ +.|... .++++|.++... .+|... ...-.+.||+++++.|. ++|+|+|||+
T Consensus 17 ~~i~v~~G~tV~--~~n~~~-~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~--~~G~y~~~C~- 85 (99)
T 1byp_A 17 SDLSIASGEKIT--FKNNAG-FPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT--EKGTYKFYCA- 85 (99)
T ss_dssp SEEEECTTEEEE--EEECSS-CCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC--SCEEEEEECG-
T ss_pred CEEEECCCCEEE--EEECCC-CcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC--CCcEEEEEcC-
Confidence 589999999864 578864 577788776432 122210 01124789999999885 8999999999
Q ss_pred chhhhcCceeEEEEe
Q psy16562 184 GLQKMDGLEGSMIIR 198 (445)
Q Consensus 184 ~~q~~~Gl~G~lIV~ 198 (445)
.|...||.|.|+|+
T Consensus 86 -~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 -PHAGAGMVGKVTVN 99 (99)
T ss_dssp -GGTTTTCEEEEEEC
T ss_pred -CccccCCEEEEEEC
Confidence 67777999999984
No 89
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.45 E-value=6.2e-07 Score=72.39 Aligned_cols=77 Identities=14% Similarity=0.229 Sum_probs=55.1
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCc------ccccCCCCCCceEEEEecCCCcceEEeccc
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM------VTQCPIPSSTTFRYKFPAMPSGTFFYHSHV 183 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~------~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~ 183 (445)
+.|++++||+|+ +.|... .+++++.++... .+|... ...-.+.||+++++.|. ++|+|+|||+
T Consensus 17 ~~i~v~~G~tV~--~~n~~~-~~H~v~~~~~~~-----p~~~~~~~~~~~~~~~~~~~G~~~~~tf~--~~G~y~~~C~- 85 (99)
T 1plc_A 17 SEFSISPGEKIV--FKNNAG-FPHNIVFDEDSI-----PSGVDASKISMSEEDLLNAKGETFEVALS--NKGEYSFYCS- 85 (99)
T ss_dssp SEEEECTTCEEE--EEECSS-CCBCCEECTTSS-----CTTCCHHHHCCCTTCCBCSTTCEEEEECC--SCEEEEEECG-
T ss_pred CEEEECCCCEEE--EEECCC-CceEEEEeCCCC-----cccccccccccccCccccCCCCEEEEEEC--CCceEEEEcC-
Confidence 689999999775 578754 567777665322 122110 01124789999988875 8999999999
Q ss_pred chhhhcCceeEEEEe
Q psy16562 184 GLQKMDGLEGSMIIR 198 (445)
Q Consensus 184 ~~q~~~Gl~G~lIV~ 198 (445)
.|...||.|.|+|+
T Consensus 86 -~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 -PHQGAGMVGKVTVN 99 (99)
T ss_dssp -GGTTTTCEEEEEEC
T ss_pred -CCcccCCEEEEEEC
Confidence 67778999999984
No 90
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.30 E-value=2.1e-06 Score=72.39 Aligned_cols=76 Identities=12% Similarity=0.113 Sum_probs=50.7
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhh
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKM 188 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~ 188 (445)
-+.|+|++||+|+ +.|... + |.+.......-+|.... ...||++++|.| ..+|+|+|+|. .|..
T Consensus 20 P~~i~V~~GdtV~--f~~~~~--~-----H~v~~~~~~~p~~~~~~---~~~pG~t~~~tF--~~~G~y~y~C~--~H~~ 83 (123)
T 1paz_A 20 PAYIKANPGDTVT--FIPVDK--G-----HNVESIKDMIPEGAEKF---KSKINENYVLTV--TQPGAYLVKCT--PHYA 83 (123)
T ss_dssp SSEEEECTTCEEE--EEESSS--S-----CCCEECTTCSCTTCCCC---BCCTTCCEEEEC--CSCEEEEEECT--TTGG
T ss_pred CCEEEECCCCEEE--EEECCC--C-----eEEEEecccCCCCccce---ecCCCCEEEEEe--CCCEEEEEEeC--Cccc
Confidence 3689999999975 555532 3 43332111112332111 246899888777 58999999996 4677
Q ss_pred cCceeEEEEeCC
Q psy16562 189 DGLEGSMIIRTP 200 (445)
Q Consensus 189 ~Gl~G~lIV~~~ 200 (445)
.||.|.|+|.++
T Consensus 84 ~gM~G~I~V~~~ 95 (123)
T 1paz_A 84 MGMIALIAVGDS 95 (123)
T ss_dssp GTCEEEEEESSS
T ss_pred CCCEEEEEEcCC
Confidence 899999999864
No 91
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.28 E-value=1.9e-06 Score=72.67 Aligned_cols=76 Identities=17% Similarity=0.152 Sum_probs=51.2
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhh
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKM 188 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~ 188 (445)
-+.|+|++||+|+ +.|... + |.+.......-||.... .+.||++++|.| ..+|+|+|+|. .|..
T Consensus 20 P~~i~V~~GdtV~--f~n~~~--~-----H~v~~~~~~~p~~~~~~---~~~pG~t~~~tF--~~~G~y~y~C~--~H~~ 83 (123)
T 1pmy_A 20 PALVRLKPGDSIK--FLPTDK--G-----HNVETIKGMAPDGADYV---KTTVGQEAVVKF--DKEGVYGFKCA--PHYM 83 (123)
T ss_dssp SSEEEECTTCEEE--EECSSS--S-----CCCEECTTSSCTTCCCC---BCCTTSCEEEEC--CSCEEEEEECS--TTTT
T ss_pred CCEEEECCCCEEE--EEECCC--C-----cEEEEecccCCCCccce---ecCCCCEEEEEe--CCCeEEEEEeC--Cccc
Confidence 3689999999955 566532 3 33332211122332111 357999988877 58999999997 4667
Q ss_pred cCceeEEEEeCC
Q psy16562 189 DGLEGSMIIRTP 200 (445)
Q Consensus 189 ~Gl~G~lIV~~~ 200 (445)
.||.|.|+|.++
T Consensus 84 ~gM~G~I~V~~~ 95 (123)
T 1pmy_A 84 MGMVALVVVGDK 95 (123)
T ss_dssp TTCEEEEEESSC
T ss_pred cCCEEEEEEcCC
Confidence 899999999864
No 92
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=98.21 E-value=1.3e-06 Score=71.10 Aligned_cols=85 Identities=8% Similarity=0.117 Sum_probs=55.9
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEE
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQA 343 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~ 343 (445)
++.+.|++++|++++| .|.+.. .+.+++++..+.. .+|........+++.|.||+++++.|.+++.+|+|||+|
T Consensus 16 f~p~~i~v~~Gd~V~~--~N~~~~--~H~v~~~~~~~~~--~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C 89 (105)
T 3cvb_A 16 FEPANVTVHPGDTVKW--VNNKLP--PHNILFDDKQVPG--ASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYC 89 (105)
T ss_dssp EESSEEEECTTEEEEE--EECSSC--CEEEEECTTSSGG--GCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEEC
T ss_pred EeCCEEEEcCCCEEEE--EECCCC--CCeEEEeCCCCCc--ccccccccccccccccCCCCeEEEEEecCCCCeeEEEEe
Confidence 4567999999999865 588754 4566666654321 111111111246788999999999998854589999999
Q ss_pred EecC-CCceeeE
Q psy16562 344 KTLC-DSITAEA 354 (445)
Q Consensus 344 ~~~~-~~~~~~a 354 (445)
+..+ .++.+..
T Consensus 90 ~~H~~~GM~G~i 101 (105)
T 3cvb_A 90 APHRGAGMVGKI 101 (105)
T ss_dssp TTTGGGTCEEEE
T ss_pred CCchhcCCEEEE
Confidence 8542 3454443
No 93
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.16 E-value=8.8e-06 Score=69.41 Aligned_cols=79 Identities=13% Similarity=0.241 Sum_probs=55.9
Q ss_pred CCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEeccc
Q psy16562 104 NRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV 183 (445)
Q Consensus 104 Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~ 183 (445)
+-.|=-+.|++++||+|++ .|... .++++++... .+|........+.||++++|.| .++|+|+|||-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~-~~H~v~~~~~-------~~g~~~~~s~~l~pG~t~~~tF--~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEV-MPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITF--NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSS-SCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE--CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCC-CceEEEEeCC-------CCCcccccccccCCCCEEEEEc--CCCEEEEEEeCC
Confidence 4455557999999999864 58765 4566665432 1222222333588999999988 589999999965
Q ss_pred chhhhcCceeEEEEe
Q psy16562 184 GLQKMDGLEGSMIIR 198 (445)
Q Consensus 184 ~~q~~~Gl~G~lIV~ 198 (445)
|. ||.|.|+|+
T Consensus 122 --H~--gM~G~I~V~ 132 (132)
T 3c75_A 122 --HP--FMRGKVIVE 132 (132)
T ss_dssp --CT--TCEEEEEEC
T ss_pred --Cc--CCEEEEEEC
Confidence 22 999999984
No 94
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.15 E-value=4.5e-06 Score=67.23 Aligned_cols=78 Identities=14% Similarity=0.109 Sum_probs=54.2
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCc----ccccCCCCCCceEEEEecCCCcceEEecccc
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM----VTQCPIPSSTTFRYKFPAMPSGTFFYHSHVG 184 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~----~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~ 184 (445)
-+.|+|++||+|+ +.|... .++++....-. +-+|.-. ...-.+.||+++++.| .++|+|+|+|-.
T Consensus 17 P~~i~v~~GdtV~--~~n~~~-~~H~v~~~~~~-----~p~g~~~~~~~~~~~~~~~g~~~~~tf--~~~G~y~y~C~~- 85 (98)
T 1iuz_A 17 PSKISVAAGEAIE--FVNNAG-FPHNIVFDEDA-----VPAGVDADAISYDDYLNSKGETVVRKL--STPGVYGVYCEP- 85 (98)
T ss_dssp SSEEEECTTCEEE--EEECSS-CCEEEEECTTS-----SCTTCCHHHHCEEEEECSTTCEEEEEC--CSCEEEEEECTT-
T ss_pred CCEEEECCCCEEE--EEECCC-CCEEEEEeCCC-----CccccccccccccccccCCCCEEEEEc--CCCEEEEEEchh-
Confidence 3689999999865 457754 56666655421 1123211 0112488999988887 689999999974
Q ss_pred hhhhcCceeEEEEe
Q psy16562 185 LQKMDGLEGSMIIR 198 (445)
Q Consensus 185 ~q~~~Gl~G~lIV~ 198 (445)
|...||.|.|+|+
T Consensus 86 -H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 86 -HAGAGMKMTITVQ 98 (98)
T ss_dssp -TGGGTCEEEEEEC
T ss_pred -hccCCCEEEEEEC
Confidence 6667999999984
No 95
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.13 E-value=1.4e-05 Score=65.97 Aligned_cols=64 Identities=9% Similarity=0.109 Sum_probs=50.4
Q ss_pred ccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEE
Q psy16562 265 PMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAK 344 (445)
Q Consensus 265 p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~ 344 (445)
..+.|++++|++++|++.|.... .+.+.+.+. | -+..+.||+++++.|.+++ +|+||++|+
T Consensus 36 ~p~~i~v~~G~~V~~~~~n~d~~--~H~~~i~~~--------~--------~~~~i~pG~~~~~~f~~~~-~G~y~~~C~ 96 (112)
T 1iby_A 36 EPETLVVKKGDAVKVVVENKSPI--SEGFSIDAF--------G--------VQEVIKAGETKTISFTADK-AGAFTIWCQ 96 (112)
T ss_dssp ESCEEEEETTCEEEEEEEECSSS--CEEEEEGGG--------T--------EEEEECTTCEEEEEEECCS-CEEEEEBCS
T ss_pred cCCEEEEeCCCEEEEEEEECCCC--eEEEEEcCC--------C--------ceeEeCCCCEEEEEEECCC-CEEEEEECC
Confidence 34689999999999999999853 234444432 2 1567999999999999876 899999998
Q ss_pred ecC
Q psy16562 345 TLC 347 (445)
Q Consensus 345 ~~~ 347 (445)
..|
T Consensus 97 ~~~ 99 (112)
T 1iby_A 97 LHP 99 (112)
T ss_dssp SSC
T ss_pred CCC
Confidence 765
No 96
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.07 E-value=1.2e-05 Score=68.22 Aligned_cols=93 Identities=12% Similarity=0.017 Sum_probs=59.9
Q ss_pred CCCCCeEEEEcC-CEEEEEEEecCCC------CCceEeeCCccc-------CCCCCCCCC----Cc-c-cccCCCCCCce
Q psy16562 106 QLPGPSIQVCKG-DTIIVDVKNHMID------REVTLHWHGVYQ-------KVTPWMDGV----PM-V-TQCPIPSSTTF 165 (445)
Q Consensus 106 ~~PGPtI~v~~G-D~v~V~v~N~l~~------~~tsiHwHG~~~-------~~~~~~DGv----p~-~-tq~pI~pG~~~ 165 (445)
+|=-..|.|++| |+|.|.|.|...- ....|-=+|..+ ...+.++=+ +. + ..--|.||++.
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 343358999999 9999999998531 122222222110 000011111 11 0 11247899999
Q ss_pred EEEEecC---CCcceEEecccchhhhcCceeEEEEeC
Q psy16562 166 RYKFPAM---PSGTFFYHSHVGLQKMDGLEGSMIIRT 199 (445)
Q Consensus 166 ~Y~f~~~---~~GT~wYH~H~~~q~~~Gl~G~lIV~~ 199 (445)
++.|+++ ++|+|||.|-...|.. ||.|-|+|.+
T Consensus 94 svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 9999997 9999999998766666 8999999963
No 97
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.03 E-value=3.8e-05 Score=67.95 Aligned_cols=93 Identities=11% Similarity=0.063 Sum_probs=59.8
Q ss_pred CCCCCeEEE-EcCCEEEEEEEecCCC------CCceEeeCCcccC------CCCCCC----CCCc-c-cccCCCCCCceE
Q psy16562 106 QLPGPSIQV-CKGDTIIVDVKNHMID------REVTLHWHGVYQK------VTPWMD----GVPM-V-TQCPIPSSTTFR 166 (445)
Q Consensus 106 ~~PGPtI~v-~~GD~v~V~v~N~l~~------~~tsiHwHG~~~~------~~~~~D----Gvp~-~-tq~pI~pG~~~~ 166 (445)
+|=-..|.| +.||+|+|.|+|...- ...+|--+|.... ....++ +-+. + ..--|.||++++
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~s 133 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESS 133 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEE
Confidence 454458999 9999999999998641 1222222221000 000001 0010 1 112479999999
Q ss_pred EEEecC--CCcceEEecccchhhhcCceeEEEEeC
Q psy16562 167 YKFPAM--PSGTFFYHSHVGLQKMDGLEGSMIIRT 199 (445)
Q Consensus 167 Y~f~~~--~~GT~wYH~H~~~q~~~Gl~G~lIV~~ 199 (445)
+.|+++ ++|+|||+|-...|.. ||.|-|+|.+
T Consensus 134 vtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 134 LTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp EEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred EEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 999988 8999999998766666 8999999963
No 98
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.93 E-value=4.3e-05 Score=62.40 Aligned_cols=79 Identities=13% Similarity=0.228 Sum_probs=52.5
Q ss_pred CCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEeccc
Q psy16562 104 NRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV 183 (445)
Q Consensus 104 Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~ 183 (445)
+-.|=-..|+|+.||+|+ +.|... .++++...... .|........+.||+++++.| .++|+|+|+|-.
T Consensus 28 ~~~F~P~~i~V~~G~tV~--~~N~d~-~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf--~~~G~y~~~C~~ 95 (106)
T 1id2_A 28 KMKYLTPEVTIKAGETVY--WVNGEV-MPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF--NEAGSYDYFCTP 95 (106)
T ss_dssp TTEESSSEEEECTTCEEE--EEECSS-SCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE--CSCEEEEEECSS
T ss_pred ecEEeCCEEEECCCCEEE--EEECCC-CcEEEEEeCCC-------CCcccccccccCCCCEEEEEe--CCCEEEEEEeCC
Confidence 445545799999999976 457754 34444433211 111111112478999999888 689999999975
Q ss_pred chhhhcCceeEEEEe
Q psy16562 184 GLQKMDGLEGSMIIR 198 (445)
Q Consensus 184 ~~q~~~Gl~G~lIV~ 198 (445)
|. ||.|.|+|+
T Consensus 96 --H~--~M~G~I~V~ 106 (106)
T 1id2_A 96 --HP--FMRGKVIVE 106 (106)
T ss_dssp --CT--TCEEEEEEC
T ss_pred --CC--CCEEEEEEC
Confidence 32 999999984
No 99
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.88 E-value=3.5e-05 Score=64.75 Aligned_cols=73 Identities=16% Similarity=0.223 Sum_probs=48.4
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhhc
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMD 189 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~~ 189 (445)
+.|+|++||+|. +.|... . |++........+|.... .+.||++++|.| +++|+|+|+|-. |..
T Consensus 21 ~~i~V~~GdtV~--f~n~d~--~-----H~v~~~~~~~p~~~~~~---~~~~g~t~~~tF--~~~G~y~y~C~~--H~~- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVT--FIPTDK--G-----HNVETIKGMIPDGAEAF---KSKINENYKVTF--TAPGVYGVKCTP--HPF- 83 (122)
T ss_dssp SEEEECTTEEEE--EEESSS--S-----CCCEECTTCSCTTCCCC---BCCTTCCEEEEE--CSCEEEEEEETT--EEE-
T ss_pred CEEEECCCCEEE--EEECCC--C-----cEEEEcccccCCCccee---ecCCCCEEEEEe--CCCEEEEEEeCC--Ccc-
Confidence 689999999865 556632 3 44433211112232111 357899998888 589999999975 222
Q ss_pred CceeEEEEeCC
Q psy16562 190 GLEGSMIIRTP 200 (445)
Q Consensus 190 Gl~G~lIV~~~ 200 (445)
|.|.|+|.++
T Consensus 84 -M~G~I~V~~~ 93 (122)
T 2ux6_A 84 -MVGVVQVGDA 93 (122)
T ss_dssp -EEEEEEESSS
T ss_pred -CEEEEEEeCC
Confidence 9999999864
No 100
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.88 E-value=9.6e-05 Score=62.64 Aligned_cols=92 Identities=14% Similarity=0.076 Sum_probs=58.3
Q ss_pred CCCCCeEEE-EcCCEEEEEEEecCCC------CCceEeeCCccc-------CCCCCCC----CCCc-c-cccCCCCCCce
Q psy16562 106 QLPGPSIQV-CKGDTIIVDVKNHMID------REVTLHWHGVYQ-------KVTPWMD----GVPM-V-TQCPIPSSTTF 165 (445)
Q Consensus 106 ~~PGPtI~v-~~GD~v~V~v~N~l~~------~~tsiHwHG~~~-------~~~~~~D----Gvp~-~-tq~pI~pG~~~ 165 (445)
+|=-..|.| +.||+|+|.|.|...- ....|-=+|..+ ...+.+| +-+. + ..--|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEE
Confidence 343358999 9999999999998641 112222222100 0000111 0111 1 11247999999
Q ss_pred EEEEecC--CCcc-eEEecccchhhhcCceeEEEEe
Q psy16562 166 RYKFPAM--PSGT-FFYHSHVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 166 ~Y~f~~~--~~GT-~wYH~H~~~q~~~Gl~G~lIV~ 198 (445)
+..|+++ ++|+ |||.|-...|.. ||.|-|+|.
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 94 SVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 9999997 7766 999998766666 899999996
No 101
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=97.80 E-value=8.6e-05 Score=63.61 Aligned_cols=72 Identities=11% Similarity=0.160 Sum_probs=51.1
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCC-----------------Ccce----eeEecEEEecCCc
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDG-----------------TAVE----PLVVDSVTLFPGD 324 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG-----------------~~v~----P~~~~~~~I~pGe 324 (445)
.+.|+|++|++|+|++.|.+... .|.|.+...+. .++. ....++..|.|||
T Consensus 34 p~~i~v~~G~~V~~~~~N~~~~~--------~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGe 105 (139)
T 2aan_A 34 KTELTVSAGQTVTIRFKNNSAVQ--------QHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNE 105 (139)
T ss_dssp CSEEEECTTCEEEEEEECCCSSC--------CBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTC
T ss_pred CCeEEECCCCEEEEEEEeCCCCC--------CeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCC
Confidence 46899999999999999998541 34444443210 1111 1234566689999
Q ss_pred eEEEEEecCCCCceEEEEEEec
Q psy16562 325 RVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 325 R~dv~v~~~~~~G~y~~~~~~~ 346 (445)
++++.|++++ +|+|+|+|+..
T Consensus 106 t~~v~f~~~~-pG~y~f~C~~~ 126 (139)
T 2aan_A 106 TVEVTFTAPA-AGTYLYICTVP 126 (139)
T ss_dssp EEEEEEECCS-SEEEEEECCST
T ss_pred EEEEEEECCC-CeEEEEEcCCC
Confidence 9999999986 89999999854
No 102
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.77 E-value=6.9e-05 Score=77.78 Aligned_cols=95 Identities=23% Similarity=0.254 Sum_probs=66.5
Q ss_pred cCCCe--EEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEE
Q psy16562 92 TADGF--ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKF 169 (445)
Q Consensus 92 ~~dG~--~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f 169 (445)
..+|. ...+...+-.|--+.|+|.+||+|++.++|.... .-. .||...+. -|+- .-+.||++.++.|
T Consensus 538 ~RdGnkV~V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~v-eDV--iHSF~IPs----lGIK----~DaiPGrtnsvtF 606 (638)
T 3sbq_A 538 IRDGNKVRVYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQI-EDV--SHGFVVVN----HGVS----MEISPQQTSSITF 606 (638)
T ss_dssp EEETTEEEEEEEEETTEESCCEEEEETTCEEEEEEEECCCS-TTC--CEEEEETT----TTEE----EEECTTCEEEEEE
T ss_pred ccCCceEEEEEEEEcccccCCEEEEecCceeEEEEecCCcC-CCc--eeeeEecC----CCce----eeeCCCCeEEEEE
Confidence 34553 3345556667777899999999999999996320 111 24443322 1211 1478999999999
Q ss_pred ecCCCcceEEeccc--c-hhhhcCceeEEEEeC
Q psy16562 170 PAMPSGTFFYHSHV--G-LQKMDGLEGSMIIRT 199 (445)
Q Consensus 170 ~~~~~GT~wYH~H~--~-~q~~~Gl~G~lIV~~ 199 (445)
++.++|+|||+|.. + .| .+|.|-|+|++
T Consensus 607 tadkPGvY~y~CSE~CGa~H--s~M~G~ViVEP 637 (638)
T 3sbq_A 607 VADKPGLHWYYCSWFCHALH--MEMVGRMMVEP 637 (638)
T ss_dssp ECCSCEEEEEECCSCCSTTC--TTCEEEEEEEC
T ss_pred EcCCCEEEEEECCCcCCCCc--ccceEEEEEec
Confidence 99999999999984 2 22 37999999985
No 103
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.72 E-value=8.4e-05 Score=62.91 Aligned_cols=91 Identities=14% Similarity=0.076 Sum_probs=58.6
Q ss_pred CCCCCeEEE-EcCCEEEEEEEecCCCCC-----ceEee--CCccc-------CCCCCCC----CCCc-c-cccCCCCCCc
Q psy16562 106 QLPGPSIQV-CKGDTIIVDVKNHMIDRE-----VTLHW--HGVYQ-------KVTPWMD----GVPM-V-TQCPIPSSTT 164 (445)
Q Consensus 106 ~~PGPtI~v-~~GD~v~V~v~N~l~~~~-----tsiHw--HG~~~-------~~~~~~D----Gvp~-~-tq~pI~pG~~ 164 (445)
+|=-..|.| +.|++|+|+|.|... .+ +++-+ .+..+ ...+.+| +-+. + ..--|.||++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~-~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes 91 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGK-LPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGET 91 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSC-SCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCE
T ss_pred eEecCEEEEecCCcEEEEEEEECCC-CcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCE
Confidence 444458999 999999999999864 22 22221 11000 0000111 1111 1 1124799999
Q ss_pred eEEEEecC--CCcc-eEEecccchhhhcCceeEEEEe
Q psy16562 165 FRYKFPAM--PSGT-FFYHSHVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 165 ~~Y~f~~~--~~GT-~wYH~H~~~q~~~Gl~G~lIV~ 198 (445)
+++.|+++ ++|+ |+|.|-...|.. ||.|-|+|.
T Consensus 92 ~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 92 DSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred EEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 99999998 8995 999998766666 899999996
No 104
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.71 E-value=0.00021 Score=60.47 Aligned_cols=91 Identities=9% Similarity=0.035 Sum_probs=58.5
Q ss_pred CCCCCeEEE-EcCCEEEEEEEecCCCCC-----ceEee--CCcc-------cCCCCCCCCCC----c-c-cccCCCCCCc
Q psy16562 106 QLPGPSIQV-CKGDTIIVDVKNHMIDRE-----VTLHW--HGVY-------QKVTPWMDGVP----M-V-TQCPIPSSTT 164 (445)
Q Consensus 106 ~~PGPtI~v-~~GD~v~V~v~N~l~~~~-----tsiHw--HG~~-------~~~~~~~DGvp----~-~-tq~pI~pG~~ 164 (445)
+|=-..|.| +.||+|+|+|.|... .+ +++-. .|.. +...+.++=++ . + .---|.||++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~-~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet 92 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGS-LPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEK 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSS-CCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCE
T ss_pred cEecCEEEEecCCCEEEEEEEECCC-CcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCE
Confidence 343458999 999999999999864 21 22221 2211 00000111111 1 1 0114899999
Q ss_pred eEEEEecC--CCcc-eEEecccchhhhcCceeEEEEe
Q psy16562 165 FRYKFPAM--PSGT-FFYHSHVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 165 ~~Y~f~~~--~~GT-~wYH~H~~~q~~~Gl~G~lIV~ 198 (445)
++..|+++ .+|+ |+|.|-...|.. ||.|-|+|.
T Consensus 93 ~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 93 DSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred EEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 99999997 7887 999998766666 899999984
No 105
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.65 E-value=0.00026 Score=74.58 Aligned_cols=67 Identities=13% Similarity=0.257 Sum_probs=52.1
Q ss_pred cccceEEEecCcEEEEEEEccCCC-ceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEE
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCL-ACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQ 342 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~-~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~ 342 (445)
++++.|+|++|++++|++.|.... ...+.|++.++.+ .+.+.||+..++.|++++ +|+||||
T Consensus 510 f~pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv----------------~~~i~PG~t~t~~Fta~~-pGtY~yh 572 (595)
T 1fwx_A 510 FSIESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGV----------------AMEIGPQMTSSVTFVAAN-PGVYWYY 572 (595)
T ss_dssp ESCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE----------------EEEECTTCEEEEEEECCS-CEEEEEE
T ss_pred ccCCEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCc----------------ceeeCCCCeEEEEEECCC-CEEEEEE
Confidence 667899999999999999997632 1245555555432 157899999999999987 8999999
Q ss_pred EEecC
Q psy16562 343 AKTLC 347 (445)
Q Consensus 343 ~~~~~ 347 (445)
|+..|
T Consensus 573 C~e~C 577 (595)
T 1fwx_A 573 CQWFC 577 (595)
T ss_dssp CCSCC
T ss_pred CCCCC
Confidence 98554
No 106
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=97.63 E-value=0.00021 Score=57.51 Aligned_cols=70 Identities=10% Similarity=0.195 Sum_probs=52.2
Q ss_pred ceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec
Q psy16562 267 HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 267 ~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~ 346 (445)
..|++++|++|+|.+.|.+.. .+.|.+++... ...+.||+..++.|++++ +|+|.|+|...
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~~--~H~~~~~~~~~----------------~~~~~pg~~~~~~~t~~~-~G~Y~y~C~~H 88 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGKS--EHTFTIKKLGI----------------DVVVESGKEKNITVKPKS-AGTYELICRYH 88 (100)
T ss_dssp SEEEECTTSCEEEEEEECSSS--CEEEEEGGGTE----------------EEEECTTCEEEEEECCCS-CEEEEEECTTT
T ss_pred CEEEECCCCEEEEEEEcCCCc--eEEEEEecCCc----------------ceeecCCcceeEEEeccc-CceEEEECccc
Confidence 479999999999999999864 35555554332 235789999999999987 79999999654
Q ss_pred C-CCceeeEE
Q psy16562 347 C-DSITAEAV 355 (445)
Q Consensus 347 ~-~~~~~~ai 355 (445)
| .++.+..+
T Consensus 89 ~~~gM~G~i~ 98 (100)
T 4hci_A 89 LLKGMEGKVI 98 (100)
T ss_dssp GGGTCEEEEE
T ss_pred cCCCCEEEEE
Confidence 3 44444433
No 107
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.62 E-value=0.00023 Score=62.18 Aligned_cols=94 Identities=12% Similarity=0.080 Sum_probs=54.2
Q ss_pred eEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEeccc--ceEEEccCCCcceeeEecEEEecCCc
Q psy16562 247 AILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKH--QLQVIASDGTAVEPLVVDSVTLFPGD 324 (445)
Q Consensus 247 ~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh--~~~via~DG~~v~P~~~~~~~I~pGe 324 (445)
.+.++|... |.|+|++|++++|++.|.+... .+.+.+... .+.....+ ..+.+.......|.|||
T Consensus 52 ~~~~~g~~~-----------p~i~V~~GD~V~~~~tN~~~~~-~H~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~i~PG~ 118 (154)
T 2cal_A 52 SFEVHDKKN-----------PTLEIPAGATVDVTFINTNKGF-GHSFDITKKGPPYAVMPVI-DPIVAGTGFSPVPKDGK 118 (154)
T ss_dssp CEEETTEES-----------CEEEECTTCEEEEEEEECCTTC-CCCCEEESCCSCCCSSCCC-CSEEEEBCCCCCCBTTB
T ss_pred cccccCCCC-----------CEEEEeCCCEEEEEEEcCCCCe-eeEEEEeecCcchhccccc-cccccccccccccCCCC
Confidence 567777633 5899999999999999975321 222222211 11000000 00100000112679999
Q ss_pred --eEEEEEecCCCCceEEEEEEec--C-CCceeeEE
Q psy16562 325 --RVDVIIHTNQSNNLYWMQAKTL--C-DSITAEAV 355 (445)
Q Consensus 325 --R~dv~v~~~~~~G~y~~~~~~~--~-~~~~~~ai 355 (445)
+.++.|++ + +|+|||+|+.. | .++.+..+
T Consensus 119 sgt~t~tft~-~-pGtY~y~C~~~gH~~~GM~G~Ii 152 (154)
T 2cal_A 119 FGYTDFTWHP-T-AGTYYYVCQIPGMAATGMFGKIV 152 (154)
T ss_dssp EEEEEEEECC-C-SEEEEEECCSTTTGGGTCEEEEE
T ss_pred ceEEEEEEEE-C-CceEEEECCCCCHHHCCCEEEEE
Confidence 88999998 6 89999999754 3 34444433
No 108
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=97.31 E-value=5.8e-05 Score=61.31 Aligned_cols=82 Identities=7% Similarity=0.091 Sum_probs=49.0
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
.+.|+|++|++++|. |.+.. .+.+.+++..+. ..+|........+.+.+.||+++++.|.++..+|+|||+|+.
T Consensus 19 P~~i~v~~Gd~V~~~--n~~~~--~H~~~~~~~~~~--~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~~ 92 (106)
T 2gim_A 19 PAKLTIKPGDTVEFL--NNKVP--PHNVVFDAALNP--AKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCEP 92 (106)
T ss_dssp SSEEEECTTCEEEEE--ECSSS--CCCBEECSSSST--TCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECTT
T ss_pred CCEEEECCCCEEEEE--ECCCC--CceEEEeCCCCc--ccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeCC
Confidence 468999999998875 77643 234444432210 011211000112456789999999988774458999999984
Q ss_pred cC-CCceee
Q psy16562 346 LC-DSITAE 353 (445)
Q Consensus 346 ~~-~~~~~~ 353 (445)
.+ .++.+.
T Consensus 93 H~~~GM~G~ 101 (106)
T 2gim_A 93 HRGAGMVGK 101 (106)
T ss_dssp TGGGTCEEE
T ss_pred hhhcCcEEE
Confidence 33 244443
No 109
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=96.86 E-value=0.003 Score=50.10 Aligned_cols=70 Identities=10% Similarity=0.217 Sum_probs=45.6
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
.+.|++++|++++| .|.+.. .+.+.+++..+ -+|..-.....+...+.||+++.+.| ++ +|.|+|+|+.
T Consensus 17 P~~i~v~~G~~V~~--~n~~~~--~H~~~~~~~~~----p~~~~~~~~~~~~~~~~pG~~~~~tf--~~-~G~y~y~C~~ 85 (98)
T 2plt_A 17 PKTLTIKSGETVNF--VNNAGF--PHNIVFDEDAI----PSGVNADAISRDDYLNAPGETYSVKL--TA-AGEYGYYCEP 85 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSC--CEEEEECGGGS----CTTCCHHHHCEEEEECSTTCEEEEEC--CS-CEEEEEECGG
T ss_pred CCEEEECCCCEEEE--EECCCC--ceEEEEeCCCC----CCccccccccccceecCCCCEEEEEe--CC-CeEEEEEcCC
Confidence 46899999999887 677643 45665654321 02211100123567899999998865 44 8999999975
Q ss_pred c
Q psy16562 346 L 346 (445)
Q Consensus 346 ~ 346 (445)
.
T Consensus 86 H 86 (98)
T 2plt_A 86 H 86 (98)
T ss_dssp G
T ss_pred c
Confidence 4
No 110
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=96.85 E-value=0.00071 Score=57.83 Aligned_cols=78 Identities=9% Similarity=0.068 Sum_probs=49.1
Q ss_pred cceEEEecCcEEEEEEEc--cCCCceeEEEEeccc--ceEEE-------ccCCCcce-----eeEecEEEecCCceEEEE
Q psy16562 266 MHFFKVQRDKRYLMRIIG--GSCLACPLIFTIEKH--QLQVI-------ASDGTAVE-----PLVVDSVTLFPGDRVDVI 329 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN--~~~~~~~~~~~i~gh--~~~vi-------a~DG~~v~-----P~~~~~~~I~pGeR~dv~ 329 (445)
...|+|++|++|+|++.| .+.. .+.+.+... .+.-. ..+..++. ....++..|.||++.++.
T Consensus 32 P~~i~v~~G~tV~~~~~N~~~~~~--~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~ 109 (140)
T 1qhq_A 32 QTSLSLPANTVVRLDFVNQNNLGV--QHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVT 109 (140)
T ss_dssp CSEEEEETTCEEEEEEEECCSSCC--CBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEE
T ss_pred CCeEEECCCCEEEEEEECCCCCCC--ceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEE
Confidence 358999999999999999 4432 233333211 00000 00111111 123455678999999999
Q ss_pred EecCCCCceEEEEEEec
Q psy16562 330 IHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 330 v~~~~~~G~y~~~~~~~ 346 (445)
|++++ +|.|+|+|...
T Consensus 110 ~~~~~-~G~y~f~C~~~ 125 (140)
T 1qhq_A 110 FRTPA-PGTYLYICTFP 125 (140)
T ss_dssp EECCS-SEEEEEECCST
T ss_pred EEeCC-CeeEEEEeCCc
Confidence 99976 89999999854
No 111
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=96.78 E-value=0.0082 Score=50.17 Aligned_cols=88 Identities=13% Similarity=0.156 Sum_probs=54.2
Q ss_pred CCCCeEEEEc-CCEEEEEEEecCCC------CCceEee---------CCcccC-CCCCCC-CCCcc--cccCCCCCCceE
Q psy16562 107 LPGPSIQVCK-GDTIIVDVKNHMID------REVTLHW---------HGVYQK-VTPWMD-GVPMV--TQCPIPSSTTFR 166 (445)
Q Consensus 107 ~PGPtI~v~~-GD~v~V~v~N~l~~------~~tsiHw---------HG~~~~-~~~~~D-Gvp~~--tq~pI~pG~~~~ 166 (445)
|=-..|.|+. |++|+|+|.|...- ....|-- -|+... ...++. +-+.+ .-.-|.||++++
T Consensus 15 F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~ 94 (125)
T 3fsa_A 15 FNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDS 94 (125)
T ss_dssp BSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEE
T ss_pred EecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEE
Confidence 4456899986 99999999999741 1222211 111110 001110 11111 111379999999
Q ss_pred EEEecC---CCcceEEecccchhhhcCceeEEEEe
Q psy16562 167 YKFPAM---PSGTFFYHSHVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 167 Y~f~~~---~~GT~wYH~H~~~q~~~Gl~G~lIV~ 198 (445)
..|+.+ ++|+|.|-|. .|. ||.|-|+|.
T Consensus 95 vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 95 VTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 999998 8999999999 444 899999984
No 112
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=96.72 E-value=0.0022 Score=51.96 Aligned_cols=63 Identities=10% Similarity=0.084 Sum_probs=41.4
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
.+.|+|++|++++| .|.... .+.+.++. ..||.. . .++-.|.||+++++.| ++ +|+|||+|+.
T Consensus 32 P~~i~v~~Gd~V~~--~N~d~~--~H~v~~~~------~~~g~~--~--~~~~~~~pG~~~~~tf--~~-~G~y~y~C~~ 94 (105)
T 2ov0_A 32 TPELHVKVGDTVTW--INREAM--PHNVHFVA------GVLGEA--A--LKGPMMKKEQAYSLTF--TE-AGTYDYHCTP 94 (105)
T ss_dssp SSEEEECTTCEEEE--EECSSS--CBCCEECT------TTSSSS--C--EECCCBCTTEEEEEEE--CS-CEEEEEECSS
T ss_pred CCEEEECCCCEEEE--EECCCC--CEEEEEcC------CCCCcc--c--ccccccCCCCEEEEEe--CC-CEEEEEEeCC
Confidence 46899999999877 487753 23333332 124431 1 1223478999998876 44 8999999965
No 113
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=96.70 E-value=0.0026 Score=50.55 Aligned_cols=76 Identities=7% Similarity=0.084 Sum_probs=47.1
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...|++++|++++|+ |.+.. .+.+.+++...- +.+ -.....+...+.||+++.+.| ++ +|.|+|+|+.
T Consensus 18 P~~i~v~~G~~V~~~--n~~~~--~H~~~~~~~~~p--g~~---~~~~~~~~~~~~pG~~~~~tf--~~-~G~y~~~C~~ 85 (98)
T 1pcs_A 18 PSTVTIKAGEEVKWV--NNKLS--PHNIVFDADGVP--ADT---AAKLSHKGLLFAAGESFTSTF--TE-PGTYTYYCEP 85 (98)
T ss_dssp SSEEEECTTCEEEEE--ECSSC--CEEEEECCSSSC--HHH---HHHHCEEEEECSTTCEEEEEC--CS-CEEEEEECGG
T ss_pred CCEEEECCCCEEEEE--ECCCC--CcEEEEeCCCCC--ccc---cccccccccccCCCCEEEEEc--CC-CeEEEEEcCC
Confidence 458999999999886 76543 355555442210 000 000113567899999998865 44 8999999985
Q ss_pred cC-CCceee
Q psy16562 346 LC-DSITAE 353 (445)
Q Consensus 346 ~~-~~~~~~ 353 (445)
.+ .++.+.
T Consensus 86 H~~~gM~G~ 94 (98)
T 1pcs_A 86 HRGAGMVGK 94 (98)
T ss_dssp GTTTTCEEE
T ss_pred ccccCCeEE
Confidence 43 244444
No 114
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=96.70 E-value=0.0031 Score=53.22 Aligned_cols=81 Identities=10% Similarity=0.097 Sum_probs=48.4
Q ss_pred cceEEEecC-cEEEEEEEccCCCc---eeEEEEecccce-EEEccC----C---Ccce---ee-EecEEEecCCceEEEE
Q psy16562 266 MHFFKVQRD-KRYLMRIIGGSCLA---CPLIFTIEKHQL-QVIASD----G---TAVE---PL-VVDSVTLFPGDRVDVI 329 (445)
Q Consensus 266 ~~~i~v~~G-~~~rlRliN~~~~~---~~~~~~i~gh~~-~via~D----G---~~v~---P~-~~~~~~I~pGeR~dv~ 329 (445)
...|+|++| ++++|.+.|.+... ..+.|.|..... .-++.| | .++. +. ...+-.|.|||++++.
T Consensus 17 p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~svt 96 (129)
T 1cuo_A 17 TRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVK 96 (129)
T ss_dssp CSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEE
T ss_pred cCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEEE
Confidence 468999999 99999999998531 123333322210 000000 0 1111 10 0123358999999999
Q ss_pred EecC--CCCceEEEEEEec
Q psy16562 330 IHTN--QSNNLYWMQAKTL 346 (445)
Q Consensus 330 v~~~--~~~G~y~~~~~~~ 346 (445)
|+++ ..+|+|||.|...
T Consensus 97 f~~~~~~~~G~Y~f~C~~p 115 (129)
T 1cuo_A 97 FKVSALSKDEAYTYFCSYP 115 (129)
T ss_dssp EEGGGCCTTSCEEEECCST
T ss_pred EeccccCCCceEEEEeCCC
Confidence 9987 2389999999643
No 115
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=96.57 E-value=0.0069 Score=47.16 Aligned_cols=63 Identities=11% Similarity=0.158 Sum_probs=43.3
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...+++++|++++|+ |.+.. .+.+.+++. . +...+...+.||+.+.+.| ++ +|.|+|+|+.
T Consensus 18 P~~i~v~~Gd~V~~~--n~~~~--~H~v~~~~~---------~---~~~~~~~~~~~g~~~~~~f--~~-~G~y~~~C~~ 78 (91)
T 1bxv_A 18 PSTIEIQAGDTVQWV--NNKLA--PHNVVVEGQ---------P---ELSHKDLAFSPGETFEATF--SE-PGTYTYYCEP 78 (91)
T ss_dssp SSEEEECTTCEEEEE--ECSSC--CEEEEETTC---------G---GGCEEEEECSTTCEEEEEC--CS-CEEEEEECTT
T ss_pred CCEEEECCCCEEEEE--ECCCC--CcEEEEeCC---------C---ccCcccceeCCCCEEEEEe--CC-CEEEEEEeCC
Confidence 458999999999876 66533 345555441 1 1123557789999988865 44 8999999985
Q ss_pred cC
Q psy16562 346 LC 347 (445)
Q Consensus 346 ~~ 347 (445)
.|
T Consensus 79 H~ 80 (91)
T 1bxv_A 79 HR 80 (91)
T ss_dssp TG
T ss_pred Cc
Confidence 45
No 116
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=96.57 E-value=0.0024 Score=56.31 Aligned_cols=89 Identities=10% Similarity=0.109 Sum_probs=52.1
Q ss_pred cceEEE-ecCcEEEEEEEccCCCce---eEEEEecccc-eEEEcc------CCCcce---e-eEecEEEecCCceEEEEE
Q psy16562 266 MHFFKV-QRDKRYLMRIIGGSCLAC---PLIFTIEKHQ-LQVIAS------DGTAVE---P-LVVDSVTLFPGDRVDVII 330 (445)
Q Consensus 266 ~~~i~v-~~G~~~rlRliN~~~~~~---~~~~~i~gh~-~~via~------DG~~v~---P-~~~~~~~I~pGeR~dv~v 330 (445)
...|+| ++|++|+|.|.|.+...+ .+.|.|.... +.-++. +-.+++ + ....+..|.||+++++.|
T Consensus 57 P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~svtf 136 (167)
T 3ay2_A 57 TKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTL 136 (167)
T ss_dssp CSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred cceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEEEEE
Confidence 458999 999999999999985410 1233332211 000000 001121 1 112334689999999999
Q ss_pred ecC--CCCceEEEEEEecC--CCceeeEE
Q psy16562 331 HTN--QSNNLYWMQAKTLC--DSITAEAV 355 (445)
Q Consensus 331 ~~~--~~~G~y~~~~~~~~--~~~~~~ai 355 (445)
+++ + +|+|||.|...| .++.+..+
T Consensus 137 ~~~~lk-pG~Y~f~Ct~PgH~~gM~G~i~ 164 (167)
T 3ay2_A 137 DPAKLA-DGDYKFACTFPGHGALMNGKVT 164 (167)
T ss_dssp CGGGGT-TSCEEEECCSTTGGGTSEEEEE
T ss_pred ecCCCC-CcEEEEEcCCCCchhcCEEEEE
Confidence 987 5 799999996432 34444433
No 117
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=96.44 E-value=0.0044 Score=52.31 Aligned_cols=80 Identities=14% Similarity=0.125 Sum_probs=47.7
Q ss_pred cceEEE-ecCcEEEEEEEccCCCc---eeEEEEecccc-eEEEc-------cCCCcce---e-eEecEEEecCCceEEEE
Q psy16562 266 MHFFKV-QRDKRYLMRIIGGSCLA---CPLIFTIEKHQ-LQVIA-------SDGTAVE---P-LVVDSVTLFPGDRVDVI 329 (445)
Q Consensus 266 ~~~i~v-~~G~~~rlRliN~~~~~---~~~~~~i~gh~-~~via-------~DG~~v~---P-~~~~~~~I~pGeR~dv~ 329 (445)
...|+| ++|++|+|.+.|.+... ..+.|.|.... +.-++ .+-.++. + ....+-.|.|||++++.
T Consensus 17 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~svt 96 (129)
T 2ccw_A 17 VKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVT 96 (129)
T ss_dssp CSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEEE
Confidence 458999 99999999999998531 01333333221 00000 0111111 1 11123358999999999
Q ss_pred EecC--CCCceEEEEEEe
Q psy16562 330 IHTN--QSNNLYWMQAKT 345 (445)
Q Consensus 330 v~~~--~~~G~y~~~~~~ 345 (445)
|+++ +++++|||.|.-
T Consensus 97 f~~~~l~~G~~Y~f~C~~ 114 (129)
T 2ccw_A 97 FDVSKIAAGENYAYFCSF 114 (129)
T ss_dssp EEGGGSCTTCCEEEECCS
T ss_pred EeccccCCCceEEEEeCC
Confidence 9997 644569999864
No 118
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=96.35 E-value=0.0074 Score=50.80 Aligned_cols=80 Identities=14% Similarity=0.210 Sum_probs=47.1
Q ss_pred cceEEE-ecCcEEEEEEEccCCCc---eeEEEEecccc-eEEEcc-------CCCcce---e-eEecEEEecCCceEEEE
Q psy16562 266 MHFFKV-QRDKRYLMRIIGGSCLA---CPLIFTIEKHQ-LQVIAS-------DGTAVE---P-LVVDSVTLFPGDRVDVI 329 (445)
Q Consensus 266 ~~~i~v-~~G~~~rlRliN~~~~~---~~~~~~i~gh~-~~via~-------DG~~v~---P-~~~~~~~I~pGeR~dv~ 329 (445)
...|+| ++|++|+|.+.|.+... ..++|.|.... +.-++. +-.+++ + ....+-.|.|||++++.
T Consensus 17 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svt 96 (128)
T 1nwp_A 17 TKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVT 96 (128)
T ss_dssp CSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEE
Confidence 458999 99999999999998541 01333332211 000000 111221 1 11122358999999999
Q ss_pred EecC--CCCceEEEEEEe
Q psy16562 330 IHTN--QSNNLYWMQAKT 345 (445)
Q Consensus 330 v~~~--~~~G~y~~~~~~ 345 (445)
|+++ ++.++|+|.|..
T Consensus 97 f~~~~l~~G~~Y~f~C~~ 114 (128)
T 1nwp_A 97 FDVSKLAAGEKYGFFCSF 114 (128)
T ss_dssp EEGGGSCTTSCEEEECCS
T ss_pred EeccccCCCceEEEEECC
Confidence 9987 533449999864
No 119
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=96.22 E-value=0.023 Score=47.76 Aligned_cols=79 Identities=11% Similarity=0.120 Sum_probs=47.0
Q ss_pred cceEEE-ecCcEEEEEEEccCCCc---eeEEEEecccc-eEEEc-------cCCCcce---e-eEecEEEecCCceEEEE
Q psy16562 266 MHFFKV-QRDKRYLMRIIGGSCLA---CPLIFTIEKHQ-LQVIA-------SDGTAVE---P-LVVDSVTLFPGDRVDVI 329 (445)
Q Consensus 266 ~~~i~v-~~G~~~rlRliN~~~~~---~~~~~~i~gh~-~~via-------~DG~~v~---P-~~~~~~~I~pGeR~dv~ 329 (445)
...|+| ++|++++|.+.|.+... ..+++.|.... +.-++ .|-.++. + ....+-.|.|||++++.
T Consensus 16 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~vt 95 (128)
T 2iaa_C 16 TKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSVT 95 (128)
T ss_dssp CSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEEEE
Confidence 458999 99999999999998531 01233332211 00000 0111121 1 11123358999999999
Q ss_pred EecC--CCCc-eEEEEEEe
Q psy16562 330 IHTN--QSNN-LYWMQAKT 345 (445)
Q Consensus 330 v~~~--~~~G-~y~~~~~~ 345 (445)
|+++ + +| +|+|.|..
T Consensus 96 f~~~~l~-~G~~Y~f~C~~ 113 (128)
T 2iaa_C 96 FDVSKLK-EGEDYAFFCSF 113 (128)
T ss_dssp EESSCCC-TTCCEEEECCS
T ss_pred EeccccC-CCceEEEEECC
Confidence 9987 5 67 59999864
No 120
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=96.06 E-value=0.0067 Score=48.45 Aligned_cols=75 Identities=5% Similarity=-0.040 Sum_probs=45.2
Q ss_pred ccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCc-------cee-eEecEEEecCCceEEEEEecCCCC
Q psy16562 265 PMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTA-------VEP-LVVDSVTLFPGDRVDVIIHTNQSN 336 (445)
Q Consensus 265 p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~-------v~P-~~~~~~~I~pGeR~dv~v~~~~~~ 336 (445)
..+.|+|++|++|+|+ |.+... |.+.+..-++.. ..+ ...+.+.+.||+++++.| ++ +
T Consensus 15 ~P~~i~v~~G~tV~~~--n~~~~~---------H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf--~~-~ 80 (102)
T 1kdj_A 15 YPDSITVSAGEAVEFT--LVGETG---------HNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV--ST-P 80 (102)
T ss_dssp ESSEEEECTTCCEEEE--ECSSSC---------BCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC--CS-C
T ss_pred eCCEEEECCCCEEEEE--ECCCCC---------eEEEEeCcccccccccchhhcccccccceecCCCCEEEEEe--CC-C
Confidence 3468999999999875 776432 233322223321 001 112456789999988855 44 8
Q ss_pred ceEEEEEEecC-CCceee
Q psy16562 337 NLYWMQAKTLC-DSITAE 353 (445)
Q Consensus 337 G~y~~~~~~~~-~~~~~~ 353 (445)
|+|+|+|+..+ .++.+.
T Consensus 81 G~y~y~C~~H~~~gM~G~ 98 (102)
T 1kdj_A 81 GTYTFYCTPHKSANMKGT 98 (102)
T ss_dssp EEEEEECSTTGGGTCEEE
T ss_pred eEEEEEeCCCcccCCeEE
Confidence 99999998443 244444
No 121
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=96.00 E-value=0.0073 Score=50.46 Aligned_cols=69 Identities=13% Similarity=0.146 Sum_probs=43.1
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...|+|++|++|+|.+.|.+ |.+...+ + ..|.....+.+.||+.+++.| ++ +|.|||+|..
T Consensus 20 P~~i~V~~GdtV~f~~~~~~------------H~v~~~~--~--~~P~g~~~f~~~pg~t~s~TF--~~-pG~y~y~C~~ 80 (123)
T 3erx_A 20 PAFVRAEPGDVINFVPTDKS------------HNVEAIK--E--ILPEGVESFKSKINESYTLTV--TE-PGLYGVKCTP 80 (123)
T ss_dssp SSEEEECTTEEEEEEESSTT------------CCCEECT--T--SSCTTCCCCBCCTTCCEEEEE--CS-CEEEEEECGG
T ss_pred CCEEEECCCCEEEEEECCCC------------ceEEEcC--C--cCCCCccceecCCCCEEEEEe--CC-CeEEEEEeCC
Confidence 45899999999999877732 2222221 1 001112234467999988877 44 7999999986
Q ss_pred cC-CCceee
Q psy16562 346 LC-DSITAE 353 (445)
Q Consensus 346 ~~-~~~~~~ 353 (445)
.| .++.+.
T Consensus 81 H~~~GM~G~ 89 (123)
T 3erx_A 81 HFGMGMVGL 89 (123)
T ss_dssp GTTTTCEEE
T ss_pred CCcCCcEEE
Confidence 53 344443
No 122
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=95.95 E-value=0.014 Score=46.12 Aligned_cols=75 Identities=8% Similarity=0.068 Sum_probs=43.6
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...|+|++|++++|+ |.+... +.+.++...+ -+|. .....+...+.||+++++.| ++ +|.|+|+|+.
T Consensus 18 P~~i~v~~G~~V~~~--n~~~~~--H~~~~~~~~~----~~~~--~~~~~~~~~~~~g~~~~~tf--~~-~G~y~y~C~~ 84 (97)
T 1b3i_A 18 PKALSISAGDTVEFV--MNKVGP--HNVIFDKVPA----GESA--PALSNTKLAIAPGSFYSVTL--GT-PGTYSFYCTP 84 (97)
T ss_dssp SSEEEECTTCEEEEE--ECSSCC--CCBEEEECCT----TSCH--HHHCBCCCCCSCSCCEEEEC--CS-CSEEEEECSS
T ss_pred CCEEEECCCCEEEEE--ECCCCC--eEEEEeCCCC----cccc--ccccccceecCCCCEEEEEe--CC-CeEEEEEccC
Confidence 357999999998775 765322 2222222111 0110 00112456789999998865 44 8999999985
Q ss_pred cC-CCceee
Q psy16562 346 LC-DSITAE 353 (445)
Q Consensus 346 ~~-~~~~~~ 353 (445)
.+ .++.+.
T Consensus 85 H~~~gM~G~ 93 (97)
T 1b3i_A 85 HRGAGMVGT 93 (97)
T ss_dssp TTTTTCEEE
T ss_pred hhhcCCEEE
Confidence 43 244443
No 123
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.88 E-value=0.045 Score=46.38 Aligned_cols=72 Identities=13% Similarity=0.259 Sum_probs=53.2
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEeccc--c-hh
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV--G-LQ 186 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~--~-~q 186 (445)
..|.+..|++|++.+.|.. . .|+...+. .|.- .-+.||+.-++.|++.++|+|.|+|.- + .|
T Consensus 60 ~~l~Vp~G~~V~~~vts~D--V-----~Hsf~ip~----~~~k----~d~~PG~~~~~~~~~~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD--V-----IHGFHVEG----TNIN----VEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS--S-----CEEEEETT----SSCE----EEECBTBCEEEEEECCSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeCC--c-----cceEEecC----CCce----eEeCCCCcEEEEEEcCCCEEEEEECcccCCCCc
Confidence 4899999999999999873 2 24444332 1111 136789999999999999999999963 2 33
Q ss_pred hhcCceeEEEEe
Q psy16562 187 KMDGLEGSMIIR 198 (445)
Q Consensus 187 ~~~Gl~G~lIV~ 198 (445)
.+|.|-++|.
T Consensus 125 --~~M~g~v~V~ 134 (135)
T 2cua_A 125 --QNMFGTIVVK 134 (135)
T ss_dssp --TTCEEEEEEE
T ss_pred --CCCEEEEEEE
Confidence 3899999886
No 124
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=95.87 E-value=0.011 Score=49.47 Aligned_cols=80 Identities=11% Similarity=0.226 Sum_probs=48.5
Q ss_pred cceEEEec-CcEEEEEEEccCCCc---eeEEEEeccc-ceEEEc-------cCCCccee----eEecEEEecCCceEEEE
Q psy16562 266 MHFFKVQR-DKRYLMRIIGGSCLA---CPLIFTIEKH-QLQVIA-------SDGTAVEP----LVVDSVTLFPGDRVDVI 329 (445)
Q Consensus 266 ~~~i~v~~-G~~~rlRliN~~~~~---~~~~~~i~gh-~~~via-------~DG~~v~P----~~~~~~~I~pGeR~dv~ 329 (445)
...|+|++ |+++||.|.|.+... ..+++-|... .+.-++ .|-.++++ +...+-.|.|||++++.
T Consensus 17 p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vt 96 (125)
T 3fsa_A 17 TNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVT 96 (125)
T ss_dssp CSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEE
Confidence 45899976 999999999999541 0122223210 000001 12234432 22344469999999999
Q ss_pred EecCC--CCceEEEEEEe
Q psy16562 330 IHTNQ--SNNLYWMQAKT 345 (445)
Q Consensus 330 v~~~~--~~G~y~~~~~~ 345 (445)
|+++. .+|+|.|.|..
T Consensus 97 f~~~~l~~~G~y~f~C~g 114 (125)
T 3fsa_A 97 FDVSKLKEGEQYMFFCAA 114 (125)
T ss_dssp EEGGGC---CCEEEECSS
T ss_pred EeCcCcCCCccEEEEcCC
Confidence 99982 47999998873
No 125
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=95.63 E-value=0.029 Score=44.45 Aligned_cols=72 Identities=10% Similarity=0.124 Sum_probs=43.1
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEE
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQA 343 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~ 343 (445)
+....|+|++|++++|. |.... .+.+.+....+ -+|........+...+.||+++++.| ++ +|.|+|+|
T Consensus 15 F~P~~i~v~~GdtV~~~--n~~~~--~H~v~~~~~~~----p~g~~~~~~~~~~~~~~~g~~~~~tf--~~-~G~y~y~C 83 (98)
T 1iuz_A 15 FVPSKISVAAGEAIEFV--NNAGF--PHNIVFDEDAV----PAGVDADAISYDDYLNSKGETVVRKL--ST-PGVYGVYC 83 (98)
T ss_dssp EESSEEEECTTCEEEEE--ECSSC--CEEEEECTTSS----CTTCCHHHHCEEEEECSTTCEEEEEC--CS-CEEEEEEC
T ss_pred EeCCEEEECCCCEEEEE--ECCCC--CEEEEEeCCCC----ccccccccccccccccCCCCEEEEEc--CC-CEEEEEEc
Confidence 33468999999998875 66543 34444332100 01211111112346799999998866 44 89999998
Q ss_pred Eec
Q psy16562 344 KTL 346 (445)
Q Consensus 344 ~~~ 346 (445)
...
T Consensus 84 ~~H 86 (98)
T 1iuz_A 84 EPH 86 (98)
T ss_dssp TTT
T ss_pred hhh
Confidence 644
No 126
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=95.57 E-value=0.016 Score=45.93 Aligned_cols=77 Identities=10% Similarity=0.208 Sum_probs=45.4
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcce--eeEecEEEecCCceEEEEEecCCCCceEEEEE
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE--PLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQA 343 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~--P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~ 343 (445)
...|+|++|++++| .|.+.. .+.+.++...+ .+|.... ....+.+.+.||+++.+.|+ + +|.|+|+|
T Consensus 16 P~~i~v~~G~tV~~--~n~~~~--~H~~~~~~~~~----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~--~-~G~y~~~C 84 (99)
T 1byp_A 16 PSDLSIASGEKITF--KNNAGF--PHNDLFDKKEV----PAGVDVTKISMPEEDLLNAPGEEYSVTLT--E-KGTYKFYC 84 (99)
T ss_dssp SSEEEECTTEEEEE--EECSSC--CBCCEECTTSS----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC--S-CEEEEEEC
T ss_pred CCEEEECCCCEEEE--EECCCC--cceEEEeCCCC----ccccccccccccccceeeCCCCEEEEEeC--C-CcEEEEEc
Confidence 45899999999877 677643 23333433211 1221110 00123467899999998764 4 89999999
Q ss_pred EecC-CCceee
Q psy16562 344 KTLC-DSITAE 353 (445)
Q Consensus 344 ~~~~-~~~~~~ 353 (445)
+..+ .++.+.
T Consensus 85 ~~H~~~gM~G~ 95 (99)
T 1byp_A 85 APHAGAGMVGK 95 (99)
T ss_dssp GGGTTTTCEEE
T ss_pred CCccccCCEEE
Confidence 8543 344443
No 127
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.57 E-value=0.065 Score=55.81 Aligned_cols=66 Identities=14% Similarity=0.267 Sum_probs=51.9
Q ss_pred cccceEEEecCcEEEEEEEccCC--CceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEE
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSC--LACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWM 341 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~--~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~ 341 (445)
+....|+|+.|++|+|.+.|... . -.+.|.|.++++. +.+.||+...+.|++++ +|.||+
T Consensus 555 FsP~eI~VP~GdtVrfiLTN~D~veD-ViHSF~IPslGIK----------------~DaiPGrtnsvtFtadk-PGvY~y 616 (638)
T 3sbq_A 555 FGVQEFTVKQGDEVTVTITNIDQIED-VSHGFVVVNHGVS----------------MEISPQQTSSITFVADK-PGLHWY 616 (638)
T ss_dssp ESCCEEEEETTCEEEEEEEECCCSTT-CCEEEEETTTTEE----------------EEECTTCEEEEEEECCS-CEEEEE
T ss_pred ccCCEEEEecCceeEEEEecCCcCCC-ceeeeEecCCCce----------------eeeCCCCeEEEEEEcCC-CEEEEE
Confidence 44568999999999999999752 2 2566666655433 25889999999999987 799999
Q ss_pred EEEecC
Q psy16562 342 QAKTLC 347 (445)
Q Consensus 342 ~~~~~~ 347 (445)
+|.-.|
T Consensus 617 ~CSE~C 622 (638)
T 3sbq_A 617 YCSWFC 622 (638)
T ss_dssp ECCSCC
T ss_pred ECCCcC
Confidence 998765
No 128
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=95.43 E-value=0.018 Score=45.70 Aligned_cols=77 Identities=8% Similarity=0.217 Sum_probs=45.0
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcce--eeEecEEEecCCceEEEEEecCCCCceEEEEE
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE--PLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQA 343 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~--P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~ 343 (445)
.+.|+|++|++++| .|.+.. .+.+.++...+ -+|.... ....+.+.+.||+++++.| ++ +|+|+|+|
T Consensus 16 P~~i~v~~G~tV~~--~n~~~~--~H~v~~~~~~~----p~~~~~~~~~~~~~~~~~~~G~~~~~tf--~~-~G~y~~~C 84 (99)
T 1plc_A 16 PSEFSISPGEKIVF--KNNAGF--PHNIVFDEDSI----PSGVDASKISMSEEDLLNAKGETFEVAL--SN-KGEYSFYC 84 (99)
T ss_dssp SSEEEECTTCEEEE--EECSSC--CBCCEECTTSS----CTTCCHHHHCCCTTCCBCSTTCEEEEEC--CS-CEEEEEEC
T ss_pred CCEEEECCCCEEEE--EECCCC--ceEEEEeCCCC----cccccccccccccCccccCCCCEEEEEE--CC-CceEEEEc
Confidence 46899999998877 677643 23333433211 0221100 0012335689999998866 44 89999999
Q ss_pred EecC-CCceee
Q psy16562 344 KTLC-DSITAE 353 (445)
Q Consensus 344 ~~~~-~~~~~~ 353 (445)
...+ .++.+.
T Consensus 85 ~~H~~~gM~G~ 95 (99)
T 1plc_A 85 SPHQGAGMVGK 95 (99)
T ss_dssp GGGTTTTCEEE
T ss_pred CCCcccCCEEE
Confidence 8543 344443
No 129
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=95.09 E-value=0.011 Score=49.57 Aligned_cols=62 Identities=11% Similarity=0.139 Sum_probs=39.0
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...|+|++|++|+|.+.|. +|.+...+ +. + |.....+.+.||+++++.| ++ +|.|||+|..
T Consensus 22 P~~i~V~~GDtVtf~n~~~------------~H~v~~~~--~~-~-P~g~~~f~s~pGet~s~TF--~~-pG~y~y~C~~ 82 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK------------GHNSALMK--GG-A-PEGAETWKGKINEEITVTL--SK-PGVYMYQCAP 82 (127)
T ss_dssp SSEEEECTTCEEEEECSSS------------SCCCEECT--TC-S-CTTCCCCBCCTTCCCEEEC--CS-CEEEEEECTT
T ss_pred CCEEEECCCCEEEEEECCC------------CceEEEcc--Cc-C-CCCccceecCCCCEEEEEe--CC-CeEEEEEeCC
Confidence 4689999999998876653 13332221 10 0 1111234457999988776 44 8999999975
Q ss_pred c
Q psy16562 346 L 346 (445)
Q Consensus 346 ~ 346 (445)
.
T Consensus 83 H 83 (127)
T 3tu6_A 83 H 83 (127)
T ss_dssp T
T ss_pred C
Confidence 4
No 130
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=94.86 E-value=0.15 Score=44.82 Aligned_cols=74 Identities=15% Similarity=0.292 Sum_probs=54.3
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEeccc--chhh
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV--GLQK 187 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~--~~q~ 187 (445)
..|.+..|++|++.++|.. . .|+...+.. |+ +--+.||+.-+..|+++++|+|++.|.- |. .
T Consensus 93 n~l~VP~G~~Vr~~vTS~D--V-----iHsf~IP~l----gi----k~da~PG~~n~~~~~~~kpG~y~g~Cse~CG~-~ 156 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSPD--V-----IHGFHVEGT----NI----NVEVLPGEVSTVRYTFKRPGEYRIICNQYCGL-G 156 (168)
T ss_dssp SSEEEETTSEEEEEEECSS--S-----CEEEEETTS----SC----EEEECTTBCEEEEEECCSCEEEEEECCSCCST-T
T ss_pred CEEEEeCCCeEEEEEecCC--c-----eEEEEECCC----Ce----EEEecCCceeEEEEEeCCCEEEEEECCcCCCC-C
Confidence 5799999999999999973 2 245544321 11 1135689999999999999999999983 42 2
Q ss_pred hcCceeEEEEeC
Q psy16562 188 MDGLEGSMIIRT 199 (445)
Q Consensus 188 ~~Gl~G~lIV~~ 199 (445)
-.+|.|-++|++
T Consensus 157 Hs~M~g~V~V~e 168 (168)
T 3s8f_B 157 HQNMFGTIVVKE 168 (168)
T ss_dssp GGGCEEEEEEEC
T ss_pred cCCCEEEEEEeC
Confidence 247999999863
No 131
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=94.02 E-value=0.055 Score=45.53 Aligned_cols=63 Identities=10% Similarity=0.119 Sum_probs=39.5
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...|+|++|++++|+ |.... ++.+.+.... +|. .. .+.-.+.||+++++.| ++ +|.|+|+|..
T Consensus 59 P~~i~V~~GdtV~~~--N~d~~--~H~v~~~~~~------~g~--~~--~~s~~l~pG~t~~~tF--~~-~G~y~y~C~~ 121 (132)
T 3c75_A 59 TPEVTIKAGETVYWV--NGEVM--PHNVAFKKGI------VGE--DA--FRGEMMTKDQAYAITF--NE-AGSYDYFCTP 121 (132)
T ss_dssp SSEEEECTTCEEEEE--ECSSS--CBCCEECTTT------SSS--SC--EECCCBCTTEEEEEEE--CS-CEEEEEECSS
T ss_pred CCEEEECCCCEEEEE--ECCCC--ceEEEEeCCC------CCc--cc--ccccccCCCCEEEEEc--CC-CEEEEEEeCC
Confidence 358999999999875 77643 2233332111 121 01 1233578999999877 44 7999999854
No 132
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=93.72 E-value=0.042 Score=45.86 Aligned_cols=69 Identities=13% Similarity=-0.001 Sum_probs=41.1
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...|+|++|++|+|...+ . ++++.+ . ++ .+ |.....+.+.||++|++.| ++ +|.|+|+|..
T Consensus 21 P~~i~V~~GDTV~f~n~~---~--~Hnv~~-------~--~~-~~-p~g~~~~~~~pg~t~s~TF--~~-~G~y~Y~C~~ 81 (124)
T 3ef4_A 21 PGFVKVEAGDTVKFVPTD---K--SHNAES-------V--RE-VW-PEGVAPVKGGFSKEVVFNA--EK-EGLYVLKCAP 81 (124)
T ss_dssp SSEEEECTTCEEEEECSS---S--SCCCEE-------C--TT-TS-CTTSCCCBCCTTCCEEEEC--CS-SEEEEEECTT
T ss_pred CCEEEECCCCEEEEEECC---C--CccEEE-------e--CC-cC-CCCccccccCCCCEEEEEe--CC-CeEEEEEcCC
Confidence 458999999998876443 1 122222 1 11 00 2112344567999988876 44 7999999975
Q ss_pred cC-CCceee
Q psy16562 346 LC-DSITAE 353 (445)
Q Consensus 346 ~~-~~~~~~ 353 (445)
.| .++.+.
T Consensus 82 H~~~GM~G~ 90 (124)
T 3ef4_A 82 HYGMGMVVL 90 (124)
T ss_dssp TGGGTCEEE
T ss_pred CCcCCCEEE
Confidence 53 344443
No 133
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=93.15 E-value=0.096 Score=42.13 Aligned_cols=62 Identities=8% Similarity=0.085 Sum_probs=38.5
Q ss_pred ceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 267 HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 267 ~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
..|+|++|++++|+ |..... +.+.+.... .|. .. .+.-.|.||+++.+.| ++ +|.|+|+|..
T Consensus 34 ~~i~V~~G~tV~~~--N~d~~~--H~v~~~~~~------~~~--~~--~~s~~l~~g~~~~~tf--~~-~G~y~~~C~~ 95 (106)
T 1id2_A 34 PEVTIKAGETVYWV--NGEVMP--HNVAFKKGI------VGE--DA--FRGEMMTKDQAYAITF--NE-AGSYDYFCTP 95 (106)
T ss_dssp SEEEECTTCEEEEE--ECSSSC--BCCEECTTT------SSS--SC--EECCCBCTTEEEEEEE--CS-CEEEEEECSS
T ss_pred CEEEECCCCEEEEE--ECCCCc--EEEEEeCCC------CCc--cc--ccccccCCCCEEEEEe--CC-CEEEEEEeCC
Confidence 58999999999876 776432 232222111 010 01 1223578999998876 44 7999999865
No 134
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=93.12 E-value=0.079 Score=44.05 Aligned_cols=60 Identities=10% Similarity=0.185 Sum_probs=37.4
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc---cCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEE
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA---SDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQ 342 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via---~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~ 342 (445)
...|+|++|++|+|...+. +|.+...+ -|| ...+.+.||+++.+.| ++ +|.|+|+
T Consensus 20 P~~i~V~~GdtV~f~~~~~------------~H~v~~~~~~~p~~-------~~~~~~~pG~t~~~tF--~~-~G~y~y~ 77 (123)
T 1paz_A 20 PAYIKANPGDTVTFIPVDK------------GHNVESIKDMIPEG-------AEKFKSKINENYVLTV--TQ-PGAYLVK 77 (123)
T ss_dssp SSEEEECTTCEEEEEESSS------------SCCCEECTTCSCTT-------CCCCBCCTTCCEEEEC--CS-CEEEEEE
T ss_pred CCEEEECCCCEEEEEECCC------------CeEEEEecccCCCC-------ccceecCCCCEEEEEe--CC-CEEEEEE
Confidence 4589999999998765443 13333221 022 1123346999877665 44 8999999
Q ss_pred EEecC
Q psy16562 343 AKTLC 347 (445)
Q Consensus 343 ~~~~~ 347 (445)
|...|
T Consensus 78 C~~H~ 82 (123)
T 1paz_A 78 CTPHY 82 (123)
T ss_dssp CTTTG
T ss_pred eCCcc
Confidence 96543
No 135
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=93.04 E-value=0.077 Score=44.15 Aligned_cols=63 Identities=13% Similarity=0.145 Sum_probs=37.6
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...|+|++|++|+|...+. +|.+.... |-. |.....+.+.||+++.+.| ++ +|.|+|+|..
T Consensus 20 P~~i~V~~GdtV~f~n~~~------------~H~v~~~~-~~~---p~~~~~~~~~pG~t~~~tF--~~-~G~y~y~C~~ 80 (123)
T 1pmy_A 20 PALVRLKPGDSIKFLPTDK------------GHNVETIK-GMA---PDGADYVKTTVGQEAVVKF--DK-EGVYGFKCAP 80 (123)
T ss_dssp SSEEEECTTCEEEEECSSS------------SCCCEECT-TSS---CTTCCCCBCCTTSCEEEEC--CS-CEEEEEECST
T ss_pred CCEEEECCCCEEEEEECCC------------CcEEEEec-ccC---CCCccceecCCCCEEEEEe--CC-CeEEEEEeCC
Confidence 3589999999988754432 23333321 000 1111223457999887666 44 7999999975
Q ss_pred cC
Q psy16562 346 LC 347 (445)
Q Consensus 346 ~~ 347 (445)
.|
T Consensus 81 H~ 82 (123)
T 1pmy_A 81 HY 82 (123)
T ss_dssp TT
T ss_pred cc
Confidence 44
No 136
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=92.77 E-value=0.74 Score=38.75 Aligned_cols=60 Identities=17% Similarity=0.313 Sum_probs=45.4
Q ss_pred eEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEecC
Q psy16562 268 FFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTLC 347 (445)
Q Consensus 268 ~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~~ 347 (445)
.|.++.|+++||++.|... .+.|.+....+ .+.+.||+.-.+.+++++ +|.|++.|.-.|
T Consensus 61 ~l~Vp~G~~V~~~vts~DV---~Hsf~ip~~~~----------------k~d~~PG~~~~~~~~~~~-~G~y~~~C~e~C 120 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPDV---IHGFHVEGTNI----------------NVEVLPGEVSTVRYTFKR-PGEYRIICNQYC 120 (135)
T ss_dssp SEEEETTSEEEEEEEBSSS---CEEEEETTSSC----------------EEEECBTBCEEEEEECCS-CEEEEEECCSCC
T ss_pred EEEEcCCCEEEEEEEeCCc---cceEEecCCCc----------------eeEeCCCCcEEEEEEcCC-CEEEEEECcccC
Confidence 6999999999999998752 34555544332 245678988888899887 799999996654
No 137
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=91.40 E-value=1 Score=39.34 Aligned_cols=60 Identities=17% Similarity=0.313 Sum_probs=46.7
Q ss_pred eEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEecC
Q psy16562 268 FFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTLC 347 (445)
Q Consensus 268 ~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~~ 347 (445)
.+.++.|+++||++.|... .+.|.|...++ .+.+.||+.-.+.+.+++ +|.|++.|.-.|
T Consensus 94 ~l~VP~G~~Vr~~vTS~DV---iHsf~IP~lgi----------------k~da~PG~~n~~~~~~~k-pG~y~g~Cse~C 153 (168)
T 3s8f_B 94 PIEVPQGAEIVFKITSPDV---IHGFHVEGTNI----------------NVEVLPGEVSTVRYTFKR-PGEYRIICNQYC 153 (168)
T ss_dssp SEEEETTSEEEEEEECSSS---CEEEEETTSSC----------------EEEECTTBCEEEEEECCS-CEEEEEECCSCC
T ss_pred EEEEeCCCeEEEEEecCCc---eEEEEECCCCe----------------EEEecCCceeEEEEEeCC-CEEEEEECCcCC
Confidence 6899999999999999742 45666655433 234678998889999987 799999997655
No 138
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=91.37 E-value=1 Score=37.09 Aligned_cols=73 Identities=14% Similarity=0.115 Sum_probs=49.1
Q ss_pred cCcEE--EEEEEccCCCceeEEEEecccceEE--EccCCCcce--------eeEecEEEecCCceEEEEEecCC--CCce
Q psy16562 273 RDKRY--LMRIIGGSCLACPLIFTIEKHQLQV--IASDGTAVE--------PLVVDSVTLFPGDRVDVIIHTNQ--SNNL 338 (445)
Q Consensus 273 ~G~~~--rlRliN~~~~~~~~~~~i~gh~~~v--ia~DG~~v~--------P~~~~~~~I~pGeR~dv~v~~~~--~~G~ 338 (445)
.|+.+ .|.+.|.+...+.+.|. .|+.+.+ ...+|..+- +.......|.|||...|....++ .||+
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~-Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFS-TGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEES-SSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeC-CCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 44444 46778888765554444 4555444 444565542 23457889999999999999884 4799
Q ss_pred EEEEEEec
Q psy16562 339 YWMQAKTL 346 (445)
Q Consensus 339 y~~~~~~~ 346 (445)
|.+++...
T Consensus 95 Ytl~a~l~ 102 (120)
T 3isy_A 95 YEVKVTFK 102 (120)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEE
Confidence 99988655
No 139
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=90.76 E-value=0.23 Score=41.06 Aligned_cols=61 Identities=13% Similarity=0.147 Sum_probs=37.0
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...|+|++|++|+|.. ... +|.+.... | .+ |.....+.+.||+++.+.| ++ +|.|+|.|..
T Consensus 20 P~~i~V~~GdtV~f~n--~d~----------~H~v~~~~--~-~~-p~~~~~~~~~~g~t~~~tF--~~-~G~y~y~C~~ 80 (122)
T 2ux6_A 20 PASLKVAPGDTVTFIP--TDK----------GHNVETIK--G-MI-PDGAEAFKSKINENYKVTF--TA-PGVYGVKCTP 80 (122)
T ss_dssp SSEEEECTTEEEEEEE--SSS----------SCCCEECT--T-CS-CTTCCCCBCCTTCCEEEEE--CS-CEEEEEEETT
T ss_pred CCEEEECCCCEEEEEE--CCC----------CcEEEEcc--c-cc-CCCcceeecCCCCEEEEEe--CC-CEEEEEEeCC
Confidence 4589999999988864 332 23333321 1 00 1111223457999988777 44 7999999954
No 140
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=74.52 E-value=5.1 Score=32.49 Aligned_cols=48 Identities=8% Similarity=0.253 Sum_probs=35.0
Q ss_pred cEEEEEEEccCCCceeEEEEeccc-ceEEEccCCCcceeeEecEEEecCCceEEEEEec
Q psy16562 275 KRYLMRIIGGSCLACPLIFTIEKH-QLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHT 332 (445)
Q Consensus 275 ~~~rlRliN~~~~~~~~~~~i~gh-~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~ 332 (445)
-.|+|+|+|.....+.+.+++.|. ++.+++ + ..+.+.||+..++.|..
T Consensus 33 N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-------~---~~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 33 NTYTLKVINKTQQVQEYNLDVKGLNDVSWYG-------K---QTIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEEECSSSCEEEEEEEESCSSCEEES-------C---CEEEECTTCEEEEEEEE
T ss_pred EEEEEEEEECCCCCEEEEEEEeCCcccEEeC-------C---CcEEECCCCEEEEEEEE
Confidence 479999999998878888888774 344432 1 14889999987765543
No 141
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=72.54 E-value=17 Score=32.60 Aligned_cols=60 Identities=13% Similarity=0.176 Sum_probs=45.9
Q ss_pred eEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEecC
Q psy16562 268 FFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTLC 347 (445)
Q Consensus 268 ~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~~ 347 (445)
.+.+..|+.+||+|.+... .+.|.|...++.+ ...||..-.+.+.+++ +|.|+..|.-.|
T Consensus 42 ~l~lP~g~~V~~~lTS~DV---iHSF~IP~lgvK~----------------daiPGr~n~l~~~~~~-pG~y~g~CsE~C 101 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNSV---MHSFFIPRLGSQI----------------YAMAGMQTRLHLIANE-PGTYDGICAEIC 101 (205)
T ss_dssp EEEEETTSCEEEEEEESSS---CEEEEEGGGTEEE----------------EECTTCCEEEEECCSS-SEEEEEEECSCC
T ss_pred eEEEeCCCEEEEEEecCCc---eeeEEecccCcEE----------------EecCCceEEEEEEeCC-CeEEEEEccccc
Confidence 6899999999999998764 3566676555443 3457777778888887 899999997776
No 142
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=56.82 E-value=13 Score=33.33 Aligned_cols=72 Identities=17% Similarity=0.161 Sum_probs=51.2
Q ss_pred eEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEeccc--chhhh
Q psy16562 111 SIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV--GLQKM 188 (445)
Q Consensus 111 tI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~--~~q~~ 188 (445)
.|.+..|+.|++.+++..- .||..++.. | .+.-+-||..-...|.+.++|+|+..|.- |.. -
T Consensus 42 ~l~lP~g~~V~~~lTS~DV-------iHSF~IP~l----g----vK~daiPGr~n~l~~~~~~pG~y~g~CsE~CG~~-H 105 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNSV-------MHSFFIPRL----G----SQIYAMAGMQTRLHLIANEPGTYDGICAEICGPG-H 105 (205)
T ss_dssp EEEEETTSCEEEEEEESSS-------CEEEEEGGG----T----EEEEECTTCCEEEEECCSSSEEEEEEECSCCSTT-S
T ss_pred eEEEeCCCEEEEEEecCCc-------eeeEEeccc----C----cEEEecCCceEEEEEEeCCCeEEEEEcccccccc-h
Confidence 6999999999999998742 255544321 1 11235689999999999999999999973 322 2
Q ss_pred cCceeEEEEe
Q psy16562 189 DGLEGSMIIR 198 (445)
Q Consensus 189 ~Gl~G~lIV~ 198 (445)
..|.+-++|.
T Consensus 106 s~M~~~v~vv 115 (205)
T 1cyx_A 106 SGMKFKAIAT 115 (205)
T ss_dssp TTCCEEEEEE
T ss_pred hhceEEEEEE
Confidence 2577778877
No 143
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=51.84 E-value=19 Score=29.72 Aligned_cols=51 Identities=16% Similarity=0.181 Sum_probs=30.9
Q ss_pred EEEEEEEccCCCceeEEEEecccceEEEccCCCcce---e-eEecEEEecCCceEEEEE
Q psy16562 276 RYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE---P-LVVDSVTLFPGDRVDVII 330 (445)
Q Consensus 276 ~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~---P-~~~~~~~I~pGeR~dv~v 330 (445)
.|++||.|.+...+. +-...+.+...||..-+ + +...+=.|.|||.|.|.=
T Consensus 31 aY~I~I~N~~~~~vQ----L~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtS 85 (126)
T 1xvs_A 31 AYLITIKNLSSQTVQ----LMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSS 85 (126)
T ss_dssp EEEEEEEECSSSCEE----EEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEEE
T ss_pred EEEEEEEECCCCCEE----EEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEeC
Confidence 589999999976432 33334455555554322 1 112455799999888764
No 144
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=49.27 E-value=21 Score=29.43 Aligned_cols=51 Identities=18% Similarity=0.301 Sum_probs=29.6
Q ss_pred EEEEEEEccCCCceeEEEEecccceEEEccCCCcce----eeEecEEEecCCceEEEEE
Q psy16562 276 RYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE----PLVVDSVTLFPGDRVDVII 330 (445)
Q Consensus 276 ~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~----P~~~~~~~I~pGeR~dv~v 330 (445)
.|++||.|.+...+. +-...+.+...||..-+ -+...+=.|.|||.|.|.=
T Consensus 32 aY~I~I~N~~~~~vQ----L~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtS 86 (127)
T 2f1e_A 32 AYSIRIQNAGAVPAR----LVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYTS 86 (127)
T ss_dssp EEEEEEEECSSSCEE----EEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEEEE
T ss_pred EEEEEEEeCCCCCEE----EEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEeC
Confidence 589999999976432 22333444444543221 0112355699999888753
No 145
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=48.63 E-value=49 Score=30.70 Aligned_cols=60 Identities=15% Similarity=0.340 Sum_probs=45.2
Q ss_pred eEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEecC
Q psy16562 268 FFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTLC 347 (445)
Q Consensus 268 ~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~~ 347 (445)
.+.+..|+.+||++.+... .+.|.|...+..+- .-||..-.+.+.+++ +|.|+..|.-.|
T Consensus 172 ~l~lP~g~~v~~~~tS~DV---iHsf~ip~l~~k~d----------------a~PG~~n~~~~~~~~-~G~y~g~Cse~C 231 (262)
T 2gsm_B 172 AMVVPVNKTVVVQVTGADV---IHSWTVPAFGVKQD----------------AVPGRLAQLWFRAER-EGIFFGQCSELC 231 (262)
T ss_dssp CEEEETTSEEEEEEEESSS---CEEEEEGGGTEEEE----------------ECBTCCEEEEEECCS-CEEEEECCCSCC
T ss_pred eEEEecCCEEEEEEEECcc---cceeeecccCceEE----------------ecCCceeEEEEecCC-cEEEEEEChHhc
Confidence 6899999999999997754 35666766555442 456777777788877 799999887666
No 146
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=48.53 E-value=20 Score=29.87 Aligned_cols=51 Identities=20% Similarity=0.274 Sum_probs=30.7
Q ss_pred EEEEEEEccCCCceeEEEEecccceEEEccCCCcce---e-eEecEEEecCCceEEEEE
Q psy16562 276 RYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE---P-LVVDSVTLFPGDRVDVII 330 (445)
Q Consensus 276 ~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~---P-~~~~~~~I~pGeR~dv~v 330 (445)
.|++||.|.+...+. +-...+.+...||...+ + +...+=.|.|||.|.|.=
T Consensus 31 aY~ItI~N~~~~~vQ----L~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~YtS 85 (134)
T 1tza_A 31 SYTITIINLGEQAAK----LETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYTS 85 (134)
T ss_dssp EEEEEEEECSSSCEE----EEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEEEEE
T ss_pred EEEEEEEeCCCCCEE----EEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceEEcC
Confidence 589999999976432 33333455555554322 1 112455799999888753
No 147
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=48.45 E-value=22 Score=29.77 Aligned_cols=51 Identities=16% Similarity=0.239 Sum_probs=30.4
Q ss_pred EEEEEEEccCCCceeEEEEecccceEEEccCCCcce----eeEecEEEecCCceEEEEE
Q psy16562 276 RYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE----PLVVDSVTLFPGDRVDVII 330 (445)
Q Consensus 276 ~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~----P~~~~~~~I~pGeR~dv~v 330 (445)
.|++||.|.+...+. +-...+.+.+.||...+ -+...+=.|.|||.|.|.=
T Consensus 36 aY~ItI~N~~~~~vQ----L~sRhW~ItD~~G~~~eV~G~GVVGeqPvL~PGe~F~YtS 90 (139)
T 1xq4_A 36 AYTVRITNTGSHPAQ----VISRHWIITDGEERVQEVRGLGVVGQQPLLAPGETFEYTS 90 (139)
T ss_dssp EEEEEEEECSSSCEE----EEEEEEEEECTTSCEEEEEEESSSSCCCEECTTCEEEEEE
T ss_pred EEEEEEEeCCCCCEE----EEecEEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEcC
Confidence 589999999976432 33333445555554322 1122455799999888753
No 148
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=45.76 E-value=62 Score=30.66 Aligned_cols=61 Identities=20% Similarity=0.349 Sum_probs=46.3
Q ss_pred ceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec
Q psy16562 267 HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 267 ~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~ 346 (445)
..+.+..|+.+||++.+... .+.|.|...+..+ ..-||..-.+.+.+++ +|.|+..|.-.
T Consensus 189 N~lvlP~g~~V~~~ltS~DV---iHsf~iP~lg~k~----------------daiPG~~n~~~~~~~~-~G~y~g~CsE~ 248 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATDV---IHAWTIPAFAVKQ----------------DAVPGRIAQLWFSVDQ-EGVYFGQCSEL 248 (298)
T ss_dssp SCEEEESSSEEEEEEEESSS---CEEEEEGGGTEEE----------------EECTTCCEEEEEECSS-SEEEEECCCSC
T ss_pred ceEEEEcCCEEEEEEEeCCc---cceeeEcccCceE----------------EecCCceEEEEEEeCC-CEEEEEEcccc
Confidence 36899999999999998664 3566676555444 3457777778888887 79999999776
Q ss_pred C
Q psy16562 347 C 347 (445)
Q Consensus 347 ~ 347 (445)
|
T Consensus 249 C 249 (298)
T 3hb3_B 249 C 249 (298)
T ss_dssp C
T ss_pred c
Confidence 6
No 149
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=43.13 E-value=29 Score=33.70 Aligned_cols=76 Identities=14% Similarity=0.264 Sum_probs=0.0
Q ss_pred EEEEEEEecCCC-------CCceEeeCCcccCCCCCCCCCC-------ccc---ccCCCCCCceEEEEecCCC-------
Q psy16562 119 TIIVDVKNHMID-------REVTLHWHGVYQKVTPWMDGVP-------MVT---QCPIPSSTTFRYKFPAMPS------- 174 (445)
Q Consensus 119 ~v~V~v~N~l~~-------~~tsiHwHG~~~~~~~~~DGvp-------~~t---q~pI~pG~~~~Y~f~~~~~------- 174 (445)
++.++|+|+... ...+++|-.-.+.. +..+.| +++ ..||+||++.+.+.+++.+
T Consensus 267 ~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~--~~~~~P~~lla~~gL~vsd~~pI~PGETr~~~v~a~da~WeveRL 344 (382)
T 1yew_A 267 RMKLTITNHGNSPIRLGEFYTASVRFLDSDVYK--DTTGYPEDLLAEDGLSVSDNSPLAPGETRTVDVTASDAAWEVYRL 344 (382)
T ss_dssp EEEEEEEECSSSCEEEEEEECSSCEEECTTTCC--CCSCCCGGGEETTCEEESCCSCBCTTCEEEEEEEEECHHHHHTCG
T ss_pred EEEEEEEcCCCCceEeeeEEeccEEEeCCcccc--cCCCChHHhhccCCceeCCCCCcCCCceeEEEEEeehHHHHHHHh
Q ss_pred ------------cceEEecccchhhhcCceeEEE
Q psy16562 175 ------------GTFFYHSHVGLQKMDGLEGSMI 196 (445)
Q Consensus 175 ------------GT~wYH~H~~~q~~~Gl~G~lI 196 (445)
|.+++.+-.+.....-+.|++|
T Consensus 345 ~~l~~D~dSrfgGLLfF~d~~G~r~~~~I~~pvI 378 (382)
T 1yew_A 345 SDIIYDPDSRFAGLLFFFDATGNRQVVQIDAPLI 378 (382)
T ss_dssp GGGGGSSCCEEEEEEEEEETTSCEEEEEEEEECE
T ss_pred hhhhcCcccceeEEEEEEcCCCCEEEEeccCccc
No 150
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=42.79 E-value=16 Score=29.59 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=29.5
Q ss_pred EEEEecCCCcceEEecccchhhhcCceeEE-EEeCCC
Q psy16562 166 RYKFPAMPSGTFFYHSHVGLQKMDGLEGSM-IIRTPK 201 (445)
Q Consensus 166 ~Y~f~~~~~GT~wYH~H~~~q~~~Gl~G~l-IV~~~~ 201 (445)
...+++..+|++||-|-.+.|=..||..+| .|..+.
T Consensus 71 ~~~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~ 107 (116)
T 1x9u_A 71 PVKIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGG 107 (116)
T ss_dssp SEEEECCSCEEEEEECCSTTTTTTTCEEEEEEECC--
T ss_pred CeEEEECCCCCEEEECCCCCccccCCEEEEEEECCCC
Confidence 357888899999999988878788999999 887653
No 151
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=41.74 E-value=41 Score=27.51 Aligned_cols=18 Identities=17% Similarity=0.495 Sum_probs=15.7
Q ss_pred cccCCCCCCceEEEEecC
Q psy16562 155 TQCPIPSSTTFRYKFPAM 172 (445)
Q Consensus 155 tq~pI~pG~~~~Y~f~~~ 172 (445)
+.|||.+|+.++|.+..+
T Consensus 76 ~~CPl~~G~~~~y~~~~~ 93 (129)
T 1xwv_A 76 MKCPLVKGQQYDAKYTWN 93 (129)
T ss_dssp SCSSBCTTCEEEEEEEEE
T ss_pred ccCcccCCEEEEEEEEeE
Confidence 789999999999997653
No 152
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=40.23 E-value=31 Score=28.24 Aligned_cols=63 Identities=21% Similarity=0.285 Sum_probs=33.2
Q ss_pred CCeEEEEcCCEEEEEEE---ecCCCCCceEee----CCcccC-CCCCCCCCCcccccCCCCCCceEEEEecC
Q psy16562 109 GPSIQVCKGDTIIVDVK---NHMIDREVTLHW----HGVYQK-VTPWMDGVPMVTQCPIPSSTTFRYKFPAM 172 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~---N~l~~~~tsiHw----HG~~~~-~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~ 172 (445)
.+.=.+..|..+.|.+. |... ....... .|+..+ ..+..|+=..-+.|||.+|+.++|.+.++
T Consensus 25 ~~PC~l~rG~~~~i~i~f~~~~~~-~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 25 TQPCKLHRGQSYSVNVTFTSNTQS-QSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp SSSEEEETTCEEEEEEEEEESSCB-SCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred CCCCEEEcCCeEEEEEEEEccccc-ceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 34455666666666655 2211 1222222 233332 11223433223689999999999988764
No 153
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=40.13 E-value=30 Score=27.71 Aligned_cols=30 Identities=7% Similarity=0.161 Sum_probs=23.6
Q ss_pred cEEEEEEEcCCCCccceEEEEeCe-eEEEEe
Q psy16562 398 KRYLMRIIGGSCLACPLIFTIEKH-QLQVIA 427 (445)
Q Consensus 398 ~~~~~rliN~s~~~Hp~~~hihgh-~f~Vi~ 427 (445)
..|.++|+|.+...|.|.|.+.|. .++++.
T Consensus 33 N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g 63 (118)
T 2r39_A 33 NTYTLKVINKTQQVQEYNLDVKGLNDVSWYG 63 (118)
T ss_dssp EEEEEEEEECSSSCEEEEEEEESCSSCEEES
T ss_pred EEEEEEEEECCCCCEEEEEEEeCCcccEEeC
Confidence 389999999998888888888773 366554
No 154
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=38.09 E-value=80 Score=24.15 Aligned_cols=68 Identities=9% Similarity=0.077 Sum_probs=37.4
Q ss_pred EecCcEEEEEEEccCCCceeEEEEeccc--ceEEEccCCCcceeeEecEEEecCCceEEEEEecCC--CCceEEEEEEe
Q psy16562 271 VQRDKRYLMRIIGGSCLACPLIFTIEKH--QLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQ--SNNLYWMQAKT 345 (445)
Q Consensus 271 v~~G~~~rlRliN~~~~~~~~~~~i~gh--~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~--~~G~y~~~~~~ 345 (445)
-++|+++++|++-......+. .+- .+.+...+|..+.- ..........+...|..+. ..|.|.+++..
T Consensus 13 YrPGetV~~~~~~~~~~~~p~----~~~~~~v~l~dp~g~~v~~---~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDENFHPL----NELIPLVYIQDPKGNRIAQ---WQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGGGCBC----CCEEEEEEEECTTSCEEEE---EEEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred cCCCCEEEEEEEEECCCCcCC----CCCceEEEEECCCCCEEEE---EEeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 478999999987554332221 111 34455567754321 1122223445666666654 35999998865
No 155
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=36.98 E-value=61 Score=29.37 Aligned_cols=61 Identities=13% Similarity=0.232 Sum_probs=44.8
Q ss_pred ceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec
Q psy16562 267 HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 267 ~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~ 346 (445)
..+.+..|+.+|+.+..+.. .+.+.+...++.+= .-||..-.+.+.+++ +|.|+..|.-.
T Consensus 140 n~lvlP~~~~Vr~~vtS~DV---iHsf~vP~lg~K~D----------------aiPGr~n~~~~~~~~-~G~y~g~Cse~ 199 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSEDV---LHSWAVPSLGLKTD----------------AIPGRLNQTTLMSSR-PGLYYGQCSEI 199 (227)
T ss_dssp SCEEEETTSCEEEEEEESSS---CEEEEEGGGTEEEE----------------ECTTCCEEEEECCSS-CEEEEECCCSC
T ss_pred ceEEEecCCEEEEEEEeCcc---cceeeecccCcEEE----------------ecCCceEEEEEecCC-cEEEEEEehhh
Confidence 36899999999999988664 35666766555542 346666667777877 79999988666
Q ss_pred C
Q psy16562 347 C 347 (445)
Q Consensus 347 ~ 347 (445)
|
T Consensus 200 C 200 (227)
T 1v54_B 200 C 200 (227)
T ss_dssp C
T ss_pred c
Confidence 6
No 156
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=34.80 E-value=47 Score=30.88 Aligned_cols=75 Identities=17% Similarity=0.189 Sum_probs=51.3
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEeccc--chhh
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV--GLQK 187 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~--~~q~ 187 (445)
..|.+..|+.|++.+++..- .||...+.. | + +.-.-||..-...|.++++|+|+..|.- |..-
T Consensus 171 n~l~lP~g~~v~~~~tS~DV-------iHsf~ip~l----~---~-k~da~PG~~n~~~~~~~~~G~y~g~Cse~CG~~H 235 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGADV-------IHSWTVPAF----G---V-KQDAVPGRLAQLWFRAEREGIFFGQCSELCGISH 235 (262)
T ss_dssp SCEEEETTSEEEEEEEESSS-------CEEEEEGGG----T---E-EEEECBTCCEEEEEECCSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEECcc-------cceeeeccc----C---c-eEEecCCceeEEEEecCCcEEEEEEChHhcccCc
Confidence 35999999999999998743 244444321 1 1 1124578888899999999999999973 4222
Q ss_pred hcCceeEEEEeCC
Q psy16562 188 MDGLEGSMIIRTP 200 (445)
Q Consensus 188 ~~Gl~G~lIV~~~ 200 (445)
+ .|.+.++|.++
T Consensus 236 ~-~M~~~v~vv~~ 247 (262)
T 2gsm_B 236 A-YMPITVKVVSE 247 (262)
T ss_dssp G-GCCEEEEEECH
T ss_pred c-cCeEEEEEEcH
Confidence 2 46677777654
No 157
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=34.24 E-value=1.8e+02 Score=23.42 Aligned_cols=61 Identities=11% Similarity=0.121 Sum_probs=40.8
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcc---cccCCCCCCceEEEEecC---CCcceEEecc
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMV---TQCPIPSSTTFRYKFPAM---PSGTFFYHSH 182 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~---tq~pI~pG~~~~Y~f~~~---~~GT~wYH~H 182 (445)
=+|+...|.+..+.|.+.-. ...|- |+||-... ..-.|+||++.+|+...+ .+|+|..+.-
T Consensus 34 v~l~f~Sgq~~Df~v~d~~G----~~Vwr--------wS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Ytl~a~ 100 (120)
T 3isy_A 34 IEFQFSTGQKFELVVYDSEH----KERYR--------YSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYEVKVT 100 (120)
T ss_dssp EEEEESSSCCEEEEEECTTC----CEEEE--------TTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEEEEEEE
T ss_pred EEEEeCCCCEEEEEEECCCC----CEEEE--------ccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccEEEEEE
Confidence 36777777777777776432 12221 67776542 233489999999999887 4898877654
No 158
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=33.65 E-value=50 Score=32.45 Aligned_cols=76 Identities=20% Similarity=0.292 Sum_probs=0.0
Q ss_pred EEEEEEEecCCC-------CCceEeeCCc--ccCCCCCCC------CCCcccccCCCCCCceEEEEecCCC---------
Q psy16562 119 TIIVDVKNHMID-------REVTLHWHGV--YQKVTPWMD------GVPMVTQCPIPSSTTFRYKFPAMPS--------- 174 (445)
Q Consensus 119 ~v~V~v~N~l~~-------~~tsiHwHG~--~~~~~~~~D------Gvp~~tq~pI~pG~~~~Y~f~~~~~--------- 174 (445)
++.++|+|+... ...+++|-.- ....+.+.| |.. .-. ||+||++.+.+.+++.+
T Consensus 301 ~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~-pI~PGETrt~~V~a~da~WeveRL~~ 378 (419)
T 3rfr_A 301 TINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDD-VIAPGESKEIVVKIQDARWDIERLSD 378 (419)
T ss_dssp EEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCC-CBCTTCEEEEEEEEECHHHHHTTGGG
T ss_pred EEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCC-CcCCCcceEEEEEeehHHHHHHHHhh
Q ss_pred ----------cceEEecccchhhhcCceeEEE
Q psy16562 175 ----------GTFFYHSHVGLQKMDGLEGSMI 196 (445)
Q Consensus 175 ----------GT~wYH~H~~~q~~~Gl~G~lI 196 (445)
|.+++.+-.+.....-+.|++|
T Consensus 379 l~~D~dSrfgGLLfF~d~~G~r~i~~I~~pvI 410 (419)
T 3rfr_A 379 LAYDTDSQVGGLLFFFTPDGKRFAAEIGGPVI 410 (419)
T ss_dssp GGGSSSCEEEEEEEEECSSSCEEEEEEEEECE
T ss_pred hhcCchhheeEEEEEEcCCCCEEEEeccCccc
No 159
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=31.27 E-value=59 Score=30.83 Aligned_cols=75 Identities=13% Similarity=0.139 Sum_probs=51.7
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEeccc--chhh
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV--GLQK 187 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~--~~q~ 187 (445)
..|.+..|+.|++.+++..- .|+...+.- | + +--.-||..-+..|.++++|+|+..|.- |..-
T Consensus 189 N~lvlP~g~~V~~~ltS~DV-------iHsf~iP~l----g---~-k~daiPG~~n~~~~~~~~~G~y~g~CsE~CG~~H 253 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATDV-------IHAWTIPAF----A---V-KQDAVPGRIAQLWFSVDQEGVYFGQCSELCGINH 253 (298)
T ss_dssp SCEEEESSSEEEEEEEESSS-------CEEEEEGGG----T---E-EEEECTTCCEEEEEECSSSEEEEECCCSCCSTTT
T ss_pred ceEEEEcCCEEEEEEEeCCc-------cceeeEccc----C---c-eEEecCCceEEEEEEeCCCEEEEEEcccccCcCc
Confidence 46999999999999998643 244443221 1 1 1124578888899999999999999983 3222
Q ss_pred hcCceeEEEEeCC
Q psy16562 188 MDGLEGSMIIRTP 200 (445)
Q Consensus 188 ~~Gl~G~lIV~~~ 200 (445)
..|-+.+.|.++
T Consensus 254 -s~M~~~v~vvs~ 265 (298)
T 3hb3_B 254 -AYMPIVVKAVSQ 265 (298)
T ss_dssp -TSCCEEEEEECH
T ss_pred -cCCeeEEEEEcH
Confidence 247777777754
No 160
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=27.26 E-value=30 Score=28.60 Aligned_cols=19 Identities=11% Similarity=0.111 Sum_probs=16.9
Q ss_pred eEEEecCcEEEEEEEccCC
Q psy16562 268 FFKVQRDKRYLMRIIGGSC 286 (445)
Q Consensus 268 ~i~v~~G~~~rlRliN~~~ 286 (445)
.|+|+.||+|||.+.|...
T Consensus 72 ~InV~~GETVrF~v~nkt~ 90 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEKIV 90 (131)
T ss_dssp EEEEETTCEEEEEETTEEE
T ss_pred EEEecCCCEEEEEeCCcEE
Confidence 5999999999999998864
No 161
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=25.85 E-value=61 Score=25.75 Aligned_cols=35 Identities=14% Similarity=0.198 Sum_probs=29.2
Q ss_pred EEEEecCCCcceEEecccchhhhcCceeEEEEeCC
Q psy16562 166 RYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTP 200 (445)
Q Consensus 166 ~Y~f~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~ 200 (445)
...+++..+|++||-|-...|=..||..+|.|...
T Consensus 71 ~~~v~L~~~G~~yFic~~~gHC~~GmKl~I~V~~~ 105 (109)
T 1ws8_A 71 ADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPG 105 (109)
T ss_dssp EEEEECCSSEEEEEECCSTTTTTTTCEEEEEECC-
T ss_pred CEEEEECCCcCEEEECCCCCcccCCCEEEEEEcCC
Confidence 45788899999999998877878899999998654
No 162
>1gui_A Laminarinase 16A; carbohydrate binding module, CBM, glucan, cellulose; HET: BGC; 1.9A {Thermotoga maritima} SCOP: b.18.1.14
Probab=23.95 E-value=2.6e+02 Score=22.77 Aligned_cols=59 Identities=12% Similarity=0.142 Sum_probs=33.6
Q ss_pred eEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecC-CceEEEEEecCC
Q psy16562 268 FFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP-GDRVDVIIHTNQ 334 (445)
Q Consensus 268 ~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~p-GeR~dv~v~~~~ 334 (445)
.+.+++|++|+|.+--.+...+.+.+.|.. .+.+........+.+.. =+.|++.|++..
T Consensus 66 ~i~l~~G~~Y~lsf~aka~~~~~i~v~l~~--------~~~~~~~~~~~~~~lt~~w~~~~~~ft~~~ 125 (155)
T 1gui_A 66 WIGLYRGKTYTISFKAKADTPRPINVKILQ--------NHDPWTNYFAQTVNLTADWQTFTFTYTHPD 125 (155)
T ss_dssp EEECCTTCEEEEEEEEEESSCEEEEEEEEC--------SSTTCCEEEEEEEEECSSCEEEEEEEECCT
T ss_pred cEEeCCCCEEEEEEEEEeCCCCcEEEEEEc--------CCCChHHheeccEeeCCCCEEEEEEEEcCC
Confidence 478899999998887766544445444321 12222222223444544 356777777765
No 163
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=23.93 E-value=86 Score=24.53 Aligned_cols=63 Identities=13% Similarity=0.121 Sum_probs=43.7
Q ss_pred eEEEecC-cEEEEEEEccCCCceeEEEEecccceEEEc--------cCCCcceeeEecEEEecCCceEEEEEec
Q psy16562 268 FFKVQRD-KRYLMRIIGGSCLACPLIFTIEKHQLQVIA--------SDGTAVEPLVVDSVTLFPGDRVDVIIHT 332 (445)
Q Consensus 268 ~i~v~~G-~~~rlRliN~~~~~~~~~~~i~gh~~~via--------~DG~~v~P~~~~~~~I~pGeR~dv~v~~ 332 (445)
.|.+.+| +++.+.+.|.+.. ++++.-|-|-+.+-. +=|..+.-...+.+...|||.-+|.+..
T Consensus 12 ~I~lN~gr~~~~l~V~NtGDR--PIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~r~V~LV~ 83 (101)
T 4ep8_B 12 QIALNTGRATCRVVVENHGDR--PIQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVELVA 83 (101)
T ss_dssp EEECSTTCCEEEEEEEECSSS--CEEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEECTTCEEEEEEEE
T ss_pred cEEEcCCCCEEEEEEEeCCCc--ceEEccccChhHcCcceeecHhhccCceecccCCCeEeeCCCCeEEEEEEE
Confidence 4666666 5678999999975 788777777655532 2244444333578888999999988864
No 164
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=23.87 E-value=1.7e+02 Score=26.74 Aligned_cols=65 Identities=12% Similarity=0.130 Sum_probs=36.7
Q ss_pred ceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceE-EEEE
Q psy16562 267 HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLY-WMQA 343 (445)
Q Consensus 267 ~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y-~~~~ 343 (445)
..|..+-|.++.++|-|..... . ++ ..-..+..||....-...+.+.|.|||++.+. ||.| |+.+
T Consensus 129 EdiinRgGG~L~v~Ly~~~~~~-~----~~-~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~------Pg~~H~F~a 194 (246)
T 3kmh_A 129 EDIINRGGGNLIVELWNADSNE-Q----TA-DSDITVVIDGCRQKHTAGSQLRLSPGESICLP------PGLYHSFWA 194 (246)
T ss_dssp EEEEEEEESCEEEEEEEBCTTS-S----BC-CSCEEEEETTEEEEECTTCEEEECTTCEEEEC------TTEEEEEEE
T ss_pred ccEEecCCCeEEEEEEecCCCc-c----cc-CCCeEEecCCeEEEeCCCCEEEECCCCeEecC------CCCEEEEEe
Confidence 4566666667777777776432 1 11 12223334554322112378999999998853 6776 4444
No 165
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=23.06 E-value=80 Score=25.75 Aligned_cols=63 Identities=14% Similarity=0.220 Sum_probs=43.9
Q ss_pred eEEEecC-cEEEEEEEccCCCceeEEEEecccceEEEc---cC-----CCcceeeEecEEEecCCceEEEEEec
Q psy16562 268 FFKVQRD-KRYLMRIIGGSCLACPLIFTIEKHQLQVIA---SD-----GTAVEPLVVDSVTLFPGDRVDVIIHT 332 (445)
Q Consensus 268 ~i~v~~G-~~~rlRliN~~~~~~~~~~~i~gh~~~via---~D-----G~~v~P~~~~~~~I~pGeR~dv~v~~ 332 (445)
.|.+.+| ++++|.+.|.+.. ++++.-|-|-+.+-. .| |..+.-...+.+...||+.-+|.+..
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDR--PIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~ 89 (126)
T 4ubp_B 18 EIEINAGREKTTIRVSNTGDR--PIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTE 89 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSS--CEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCC--CEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEE
Confidence 4666676 5778999999975 788777777665532 13 54444333577888899988888764
No 166
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=23.06 E-value=80 Score=25.75 Aligned_cols=63 Identities=14% Similarity=0.220 Sum_probs=43.9
Q ss_pred eEEEecC-cEEEEEEEccCCCceeEEEEecccceEEEc---cC-----CCcceeeEecEEEecCCceEEEEEec
Q psy16562 268 FFKVQRD-KRYLMRIIGGSCLACPLIFTIEKHQLQVIA---SD-----GTAVEPLVVDSVTLFPGDRVDVIIHT 332 (445)
Q Consensus 268 ~i~v~~G-~~~rlRliN~~~~~~~~~~~i~gh~~~via---~D-----G~~v~P~~~~~~~I~pGeR~dv~v~~ 332 (445)
.|.+.+| ++++|.+.|.+.. ++++.-|-|-+.+-. .| |..+.-...+.+...||+.-+|.+..
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDR--PIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~ 89 (126)
T 4ac7_B 18 EIEINAGREKTTIRVSNTGDR--PIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTE 89 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSS--CEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCC--CEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEE
Confidence 4666676 5778999999975 788777777665532 13 54444333577888899988888764
No 167
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=22.78 E-value=2.7e+02 Score=22.05 Aligned_cols=19 Identities=16% Similarity=0.240 Sum_probs=16.4
Q ss_pred CCeEEEEcCCEEEEEEEec
Q psy16562 109 GPSIQVCKGDTIIVDVKNH 127 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~ 127 (445)
|-+|.++.||++.|.|.-+
T Consensus 14 ~~~i~~~~Ge~~~I~L~~N 32 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGN 32 (116)
T ss_dssp CCCEEECSSCCEEEEEECC
T ss_pred CcEEEEcCCCEEEEEeCCC
Confidence 4589999999999999854
No 168
>2wgn_B Inhibitor of cysteine peptidase compnd 3; hydrolase inhibitor, dynamics, peptidase inhibitor, cathepsi hydrolase inhibitor; NMR {Pseudomonas aeruginosa}
Probab=22.27 E-value=3.1e+02 Score=22.35 Aligned_cols=75 Identities=7% Similarity=-0.028 Sum_probs=41.6
Q ss_pred eEEEecCcEEEEEEEccCCCceeEEEEecccc-eEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 268 FFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQ-LQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 268 ~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~-~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
.|+++.|+++.++|--....-....+....-. +..+. |-.+. |...+.-.++.|-...+.|++.+ +|...+....
T Consensus 36 tI~v~~Ge~~~I~L~~NPTTGY~W~~~~~~~~vl~~l~-~~~y~-~~~~~~~~vGagG~~~w~f~A~~-~G~~~i~~~Y 111 (132)
T 2wgn_B 36 PLKLTQGQELVLTLPSNPTTGFRWELRNPAASVLKRLG-PEVYS-NSEEDSGLVGSGGESTWRFRVAA-SGDDRLELVY 111 (132)
T ss_dssp CEEECTTCEEEEEECCCTTTSCEEEEEECCTTTEEECC-SCCSC-SSCSSCCCSSSSCCEEEEEEECS-CEEEEEEEEE
T ss_pred EEEEcCCCEEEEEeCCCCCCCeEEEEecCCCceEEecc-cceec-CCCCccCCcCCCceEEEEEEEcC-CceEEEEEEE
Confidence 68999999999988744433234444432222 22222 11111 11122334666777778888877 6877665543
No 169
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=21.27 E-value=72 Score=30.45 Aligned_cols=60 Identities=12% Similarity=0.104 Sum_probs=44.1
Q ss_pred eEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEecC
Q psy16562 268 FFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTLC 347 (445)
Q Consensus 268 ~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~~ 347 (445)
.+.+..|+.+||++..... .+.|.|...+..+ ..-||..-.+.+.+++ +|.|+..|.-.|
T Consensus 152 ~l~lP~g~~V~~~lTS~DV---iHsf~IP~lg~k~----------------DaiPGr~n~~~~~~~~-~G~y~g~CsE~C 211 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSNSV---MNSFFIPRLGSQI----------------YAMAGMQTRLHLIANE-PGTYDGISASYS 211 (315)
T ss_dssp BCCCCSSSEEEEEECBSSS---CEEEEEGGGTEEE----------------EECBTSCEEEEEECCS-CBCCEEBCCSCC
T ss_pred eEEEeCCCEEEEEEEeCCc---cceeeecccCcEE----------------eecCCcceeeEEecCC-CeEEEEeccccc
Confidence 5778899999999987654 3566666555444 3456777777788887 799999887666
No 170
>2axw_A DRAD invasin; homodimer, beta-sandwich, immunoglobulin-like fold, swapped terminal strands, cell invasion; HET: GOL; 1.05A {Escherichia coli} SCOP: b.2.3.2
Probab=20.03 E-value=3e+02 Score=22.65 Aligned_cols=65 Identities=17% Similarity=0.185 Sum_probs=39.2
Q ss_pred cEEEEEEEccCCCceeEEEEecccceEEEc-cCCCcceeeEecEEEecCCceEEEEEecCC--CCceEEEEEEecC
Q psy16562 275 KRYLMRIIGGSCLACPLIFTIEKHQLQVIA-SDGTAVEPLVVDSVTLFPGDRVDVIIHTNQ--SNNLYWMQAKTLC 347 (445)
Q Consensus 275 ~~~rlRliN~~~~~~~~~~~i~gh~~~via-~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~--~~G~y~~~~~~~~ 347 (445)
.+|+|+ -|... +.+.+.|.|.++.-.. .+|.-+- .-.-.-.+-||++++-+| .+++|.+.....|
T Consensus 49 ~~Yil~-~~~~~--h~LrVRLgG~gW~pd~~~~g~Giv-----~~~~e~~~~FdVv~DGnQ~V~~D~Y~lsv~g~~ 116 (134)
T 2axw_A 49 ERYVVQ-SKDGR--HELRVRTGGDGWSPVKGEGGKGVS-----RPGQEEQVFFDVMADGNQDIAPGEYRFSVGGAC 116 (134)
T ss_dssp SEEEEE-ETTSS--CEEEEEEECTTCEECCSTTCCSEE-----EECCSSEEEEEEEESSSBCCCSEEEEEEEEEEE
T ss_pred cEEEEE-cCCCc--cEEEEEEcCCCccCCcccCCceEE-----EecCCcceEEEEEEeCCEecCCCeEEEEEEEEE
Confidence 578888 55553 3678888887776654 4442220 000122345788888777 4789988876543
Done!