RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16562
(445 letters)
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus
cinereus) [TaxId: 5346]}
Length = 131
Score = 128 bits (323), Expect = 2e-36
Identities = 49/118 (41%), Positives = 65/118 (55%), Gaps = 6/118 (5%)
Query: 89 GCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID----REVTLHWHGVYQKV 144
V+ DGF RA + +N GP I+ K D ++V N + + R ++HWHG++Q+
Sbjct: 14 ANVSPDGFTRAGILVNGV-HGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRG 72
Query: 145 TPWMDGVPMVTQCPIPSSTTFRYKFP-AMPSGTFFYHSHVGLQKMDGLEGSMIIRTPK 201
T W DG V QCPI F YKF A +GTF+YHSH G Q DGL G M+I
Sbjct: 73 TNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDN 130
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2
[TaxId: 5325]}
Length = 130
Score = 128 bits (322), Expect = 2e-36
Identities = 45/116 (38%), Positives = 63/116 (54%), Gaps = 5/116 (4%)
Query: 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID----REVTLHWHGVYQKVTP 146
V+ DGF R + +N P P I KGD ++V + + + + ++HWHG +Q T
Sbjct: 15 VSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTN 74
Query: 147 WMDGVPMVTQCPIPSSTTFRYKFPAM-PSGTFFYHSHVGLQKMDGLEGSMIIRTPK 201
W DG V QCPI S +F Y F +GTF+YHSH+ Q DGL G ++ PK
Sbjct: 75 WADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPK 130
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId:
219653]}
Length = 136
Score = 127 bits (319), Expect = 7e-36
Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 91 VTADGF-ERAILSINRQLPGPSIQVCKGDTIIVDVKNHM----IDREVTLHWHGVYQKVT 145
+ DG R+ ++ P I D ++V + + + R ++HWHG +Q T
Sbjct: 14 LDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGT 73
Query: 146 PWMDGVPMVTQCPIPSSTTFRYKFPA-MPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTAD 204
MDG V QCPI + +F Y F +GT++YHSH+ Q DGL G+ ++ P D
Sbjct: 74 TEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPN--D 131
Query: 205 PHAEL 209
PH L
Sbjct: 132 PHLSL 136
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita
pepo var. medullosa) [TaxId: 3663]}
Length = 129
Score = 120 bits (302), Expect = 2e-33
Identities = 45/111 (40%), Positives = 67/111 (60%)
Query: 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDG 150
+ E ++ IN Q PGP+I+ GD+++V++ N + V +HWHG+ Q+ TPW DG
Sbjct: 15 WAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADG 74
Query: 151 VPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPK 201
++QC I TF Y F GTFFYH H+G+Q+ GL GS+I+ P+
Sbjct: 75 TASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQ 125
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2
[TaxId: 5325]}
Length = 170
Score = 120 bits (302), Expect = 5e-33
Identities = 53/162 (32%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 204 DPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPR 263
DPHA YD D S VI +TDW H+ + DA LING ++ ++P
Sbjct: 1 DPHASRYDVDNESTVITLTDWYHT------AARLGPRFPLGADATLINGLGRS--ASTPT 52
Query: 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPG 323
+ VQ KRY R++ SC F+I+ H L VI DG +PL+VDS+ +F
Sbjct: 53 AALAVINVQHGKRYRFRLVSISCD-PNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAA 111
Query: 324 DRVDVIIHTNQSNNLYWMQAKTLCDSI-----TAEAVLQYEG 360
R +++ NQ+ YW++A ++ A+L+Y+G
Sbjct: 112 QRYSFVLNANQTVGNYWIRANPNFGTVGFAGGINSAILRYQG 153
Score = 50.1 bits (119), Expect = 6e-08
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 382 DNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSV 441
++P + VQ KRY R++ SC F+I+ H L VI DG +PL+VDS+
Sbjct: 48 ASTPTAALAVINVQHGKRYRFRLVSISCD-PNYTFSIDGHNLTVIEVDGINSQPLLVDSI 106
Query: 442 TLFP 445
+F
Sbjct: 107 QIFA 110
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus
cinereus) [TaxId: 5346]}
Length = 172
Score = 116 bits (291), Expect = 2e-31
Identities = 51/165 (30%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 205 PHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRV 264
PHA LYD D + +I + DW H S +PDA LING+ + P
Sbjct: 1 PHAALYDEDDENTIITLADWYHIPAPSIQGAA-------QPDATLINGKGRYV--GGPAA 51
Query: 265 PMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGD 324
+ V++ K+Y MR+I SC F+I+ H+L +I DG EP VD + +F G
Sbjct: 52 ELSIVNVEQGKKYRMRLISLSCD-PNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQ 110
Query: 325 RVDVIIHTNQSNNLYWMQAKTLC---------DSITAEAVLQYEG 360
R ++ NQ + YW++A+ + A+L+Y G
Sbjct: 111 RYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAG 155
Score = 48.9 bits (116), Expect = 2e-07
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 369 RPKSDSFPRGKPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIAS 428
+P + P + V++ K+Y MR+I SC F+I+ H+L +I
Sbjct: 33 QPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCD-PNWQFSIDGHELTIIEV 91
Query: 429 DGTAVEPLVVDSVTLFP 445
DG EP VD + +F
Sbjct: 92 DGELTEPHTVDRLQIFT 108
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId:
219653]}
Length = 168
Score = 115 bits (289), Expect = 3e-31
Identities = 54/156 (34%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 210 YDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFF 269
YD D S VI + DW HS++ FP PD LING +N + S +
Sbjct: 1 YDVDDASTVITIADWYHSLSTVLFPNPNKAPPA--PDTTLINGLGRNSANPSAG-QLAVV 57
Query: 270 KVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVI 329
VQ KRY RI+ SC F+I+ H++ VI DG + +PL VDS+T+F G R V+
Sbjct: 58 SVQSGKRYRFRIVSTSCF-PNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVV 116
Query: 330 IHTNQSNNLYWMQA-----KTLCDSITAEAVLQYEG 360
+ NQ+ YW++A + A+ +Y+G
Sbjct: 117 VEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQG 152
Score = 53.2 bits (127), Expect = 5e-09
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 377 RGKPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPL 436
G+ N + VQ KRY RI+ SC F+I+ H++ VI DG + +PL
Sbjct: 42 LGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCF-PNYAFSIDGHRMTVIEVDGVSHQPL 100
Query: 437 VVDSVTLFP 445
VDS+T+F
Sbjct: 101 TVDSLTIFA 109
>d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId:
204285]}
Length = 181
Score = 115 bits (289), Expect = 4e-31
Identities = 46/187 (24%), Positives = 71/187 (37%), Gaps = 20/187 (10%)
Query: 210 YDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFF 269
YD DL V +TD+ + D N D +LING NP N+
Sbjct: 1 YDIDL--GVFPITDYYYRAADDLVHFTQNNAPPF-SDNVLINGTAVNP--NTGEGQYANV 55
Query: 270 KVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVI 329
+ KR+ +RI+ S ++ H + VIA+D V + VDS+ L G R DV+
Sbjct: 56 TLTPGKRHRLRILNTST-ENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVV 114
Query: 330 IHTNQSNNLYWMQAKTLC-------DSITAEAVLQYEGEKLTYVSKRPKSDSFPRGKPKD 382
I +++ + YW + A+ Y G P + P P D
Sbjct: 115 IDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAP----GGLPTDEGTP---PVD 167
Query: 383 NSPRVPM 389
+ +
Sbjct: 168 HQCLDTL 174
Score = 53.9 bits (129), Expect = 4e-09
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 378 GKPKD-NSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPL 436
G + N+ + KR+ +RI+ S ++ H + VIA+D V +
Sbjct: 40 GTAVNPNTGEGQYANVTLTPGKRHRLRILNTST-ENHFQVSLVNHTMTVIAADMVPVNAM 98
Query: 437 VVDSVTLFP 445
VDS+ L
Sbjct: 99 TVDSLFLAV 107
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId:
204285]}
Length = 162
Score = 104 bits (259), Expect = 5e-27
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Query: 89 GCVTADGF-ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPW 147
+ DG + ++ IN + GP+I GDT+ V V N+++ ++HWHG++QK T
Sbjct: 45 NWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNL 104
Query: 148 MDGVPMVTQC-PIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTA 203
DG VT+C P Y++ A GT +YHSH Q +G+ G++ I P +
Sbjct: 105 HDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQINGPASL 161
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus)
[TaxId: 9913]}
Length = 180
Score = 93.6 bits (232), Expect = 5e-23
Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 19/125 (15%)
Query: 107 LPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVY----QKVTPWMDGVPMVTQC--PIP 160
L GP++ GD + V KN + +++H G+ + + D + + +
Sbjct: 57 LLGPTLYAEVGDIMKVHFKNKA-HKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVA 115
Query: 161 SSTTFRYKFPA----------MPSGTFFYHSHVGLQK--MDGLEGSMIIRTPKTADPHAE 208
+ Y++ P T Y+S+V L + GL G ++I T
Sbjct: 116 PGQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGT 175
Query: 209 LYDFD 213
F+
Sbjct: 176 QKMFE 180
>d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita
pepo var. medullosa) [TaxId: 3663]}
Length = 209
Score = 93.4 bits (231), Expect = 9e-23
Identities = 41/183 (22%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 210 YDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTR--IKPDAILINGQNQNPKDNSPRVPMH 267
+ +D ++++DW H + G + R +P IL+NG+ Q + + +
Sbjct: 2 FHYD-GEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSN 60
Query: 268 F---------------FKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEP 312
F V K Y +RI + L L F I HQL V+ +DG V+P
Sbjct: 61 LEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTAL-AALNFAIGNHQLLVVEADGNYVQP 119
Query: 313 LVVDSVTLFPGDRVDVIIHTNQSN-NLYWMQAKTLC---DSITAEAVLQYEGEKLTYVSK 368
+ ++ G+ V+I T+Q+ YW+ T ++ +L Y ++ +
Sbjct: 120 FYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPT 179
Query: 369 RPK 371
P
Sbjct: 180 SPP 182
Score = 47.9 bits (113), Expect = 6e-07
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 383 NSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVT 442
S + F V K Y +RI + L L F I HQL V+ +DG V+P +
Sbjct: 68 GSESCAPYIFHVSPKKTYRIRIASTTAL-AALNFAIGNHQLLVVEADGNYVQPFYTSDID 126
Query: 443 LFP 445
++
Sbjct: 127 IYS 129
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria
gonorrhoeae, AniA [TaxId: 485]}
Length = 151
Score = 91.3 bits (226), Expect = 1e-22
Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 10/117 (8%)
Query: 93 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVP 152
DG E + + +PG I+V +GDT+ V+ N+ + H V G
Sbjct: 41 DDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNP----SSTVPHNVDFHAATGQGG-- 94
Query: 153 MVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV---GLQKMDGLEGSMIIRTPKTADPH 206
T + F A+ G + YH V G+ +G+ G +++ PK P
Sbjct: 95 GAAATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVE-PKEGLPK 150
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 192
Score = 90.6 bits (224), Expect = 8e-22
Identities = 27/120 (22%), Positives = 37/120 (30%), Gaps = 19/120 (15%)
Query: 107 LPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVT----PWMDGVP--MVTQCPIP 160
GP I+ GD + V +KN T H HG+ + D +
Sbjct: 73 FLGPIIKAETGDKVYVHLKNLASR-PYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVY 131
Query: 161 SSTTFRYKFPA----------MPSGTFFYHSHVGL--QKMDGLEGSMIIRTPKTADPHAE 208
+ Y A T YHSH+ GL G +II + D E
Sbjct: 132 PGEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKE 191
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes
xylosoxidans [TaxId: 85698]}
Length = 159
Score = 89.4 bits (221), Expect = 1e-21
Identities = 22/112 (19%), Positives = 40/112 (35%), Gaps = 10/112 (8%)
Query: 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDG 150
+ G ++ N +PGP++ V +GD + + + N H V
Sbjct: 46 IDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT----NAMPHNVEFHGATGAL- 100
Query: 151 VPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSH----VGLQKMDGLEGSMIIR 198
+ +F A SGTF YH V + G+ G++++
Sbjct: 101 -GGAKLTNVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVL 151
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 207
Score = 89.0 bits (220), Expect = 4e-21
Identities = 26/132 (19%), Positives = 39/132 (29%), Gaps = 23/132 (17%)
Query: 97 ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGV----------YQKVTP 146
ER + + GP I GDTI V N +++ GV Y
Sbjct: 73 ERGPEEEHLGILGPVIWAEVGDTIRVTFHNKG-AYPLSIEPIGVRFNKNNEGTYYSPNYN 131
Query: 147 WMDGVPMVTQCPIPSSTTFRYKFPAMPSG----------TFFYHSHVGLQK--MDGLEGS 194
+ + + TF Y++ Y+S V K GL G
Sbjct: 132 PQSRSVPPSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGP 191
Query: 195 MIIRTPKTADPH 206
M I + +
Sbjct: 192 MKICKKGSLHAN 203
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus
subtilis [TaxId: 1423]}
Length = 181
Score = 87.6 bits (216), Expect = 7e-21
Identities = 26/140 (18%), Positives = 43/140 (30%), Gaps = 29/140 (20%)
Query: 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMI--------------------- 129
+ D + N PGP+I+V + + + V N++
Sbjct: 38 LHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEP 97
Query: 130 DREVTLHWHGVYQKVTPWMDGVPMVTQCPI---PSSTTFRYKFPA-MPSGTFFYHSH--- 182
+ + +H HG ++ P Y +P +YH H
Sbjct: 98 EVKTVVHLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMA 157
Query: 183 -VGLQKMDGLEGSMIIRTPK 201
L GL G+ II PK
Sbjct: 158 LTRLNVYAGLVGAYIIHDPK 177
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia
coli [TaxId: 562]}
Length = 140
Score = 84.8 bits (209), Expect = 2e-20
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 11/119 (9%)
Query: 87 RKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTP 146
G T G N L GP++++ +G + VD+ N + + E TLHWHG+
Sbjct: 23 GAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTE-ETTLHWHGLEV--PG 79
Query: 147 WMDGVPMVTQCPIPSSTTFRYKFPA-MPSGTFFYHSH----VGLQKMDGLEGSMIIRTP 200
+DG P Q IP P+ T ++H H G Q GL G ++I
Sbjct: 80 EVDGGP---QGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDD 135
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes
xylosoxidans [TaxId: 85698]}
Length = 157
Score = 81.7 bits (201), Expect = 5e-19
Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 10/112 (8%)
Query: 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDG 150
+ +G E ++ N +PGP + V + D + + + N + H + G
Sbjct: 45 IDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINP----DTNTLLHNIDFHAATGALG 100
Query: 151 VPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSH----VGLQKMDGLEGSMIIR 198
+TQ + +F A G F YH V G+ G++++
Sbjct: 101 GGALTQ--VNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVL 150
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId:
920]}
Length = 153
Score = 77.2 bits (189), Expect = 2e-17
Identities = 13/108 (12%), Positives = 30/108 (27%), Gaps = 6/108 (5%)
Query: 96 FERAILSINRQLPGPSIQVCKGDTIIVDVKN--HMIDREVTLHWHG--VYQKVTPWMDGV 151
F ++ + P++++ G T+ V N + G
Sbjct: 47 FPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVA 105
Query: 152 PMVTQCPIPSSTTFRYKFP-AMPSGTFFYHSHVGLQKMDGLEGSMIIR 198
F +GT++Y + G G ++++
Sbjct: 106 GTGFSPVPKDGKFGYTNFTWHPTAGTYYYVCQIPGHAATGQFGKIVVK 153
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter
sphaeroides [TaxId: 1063]}
Length = 153
Score = 76.7 bits (188), Expect = 2e-17
Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 11/110 (10%)
Query: 93 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVP 152
+ ++ + +PGP + V +GD + + + N H + G
Sbjct: 45 DEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINPP----ENTMPHNIDFHAATGALGGG 100
Query: 153 MVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVG-----LQKMDGLEGSMII 197
+T I +F A +G F YH G + G+ G +++
Sbjct: 101 GLT--LINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVSGMAGCIMV 148
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 179
Score = 76.2 bits (187), Expect = 7e-17
Identities = 25/114 (21%), Positives = 37/114 (32%), Gaps = 22/114 (19%)
Query: 97 ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQ 156
ER + + GP + GD + + KN R ++H HGV T
Sbjct: 73 ERKAEEEHLGILGPQLHADVGDKVKIIFKNMA-TRPYSIHAHGVQ---------TESSTV 122
Query: 157 CPIPSSTTFRYKFPAM----------PSGTFFYHSHVGLQK--MDGLEGSMIIR 198
P T Y + + Y+S V K GL G +I+
Sbjct: 123 TPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVC 176
>d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia
coli [TaxId: 562]}
Length = 165
Score = 72.0 bits (176), Expect = 1e-15
Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 15/134 (11%)
Query: 211 DFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRI--KPDAILINGQNQNPKDNSPRVPMHF 268
+ + +IV D S + D +L NG
Sbjct: 5 QWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGA-----------IYPQ 53
Query: 269 FKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV-EPLVVDSVTLFPGDRVD 327
R +R++ G T + L VIASDG + EP+ V + + G+R +
Sbjct: 54 HAAPRG-WLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFE 112
Query: 328 VIIHTNQSNNLYWM 341
V++ N + +
Sbjct: 113 VLVEVNDNKPFDLV 126
Score = 43.5 bits (102), Expect = 8e-06
Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 387 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV-EPLVVDSVTLFP 445
R +R++ G T + L VIASDG + EP+ V + +
Sbjct: 49 AIYPQHAAPRG-WLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLM 107
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 149
Score = 69.4 bits (169), Expect = 8e-15
Identities = 16/100 (16%), Positives = 32/100 (32%), Gaps = 3/100 (3%)
Query: 100 ILSINRQLPG--PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQC 157
+ +IN ++ G + + GD + + + ++ H GV
Sbjct: 48 MHAINGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLH-TVHFHGHSFQYKHRGVYSSDVF 106
Query: 158 PIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMII 197
I T + G + H HV G+E + +
Sbjct: 107 DIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTV 146
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos
taurus) [TaxId: 9913]}
Length = 139
Score = 67.1 bits (163), Expect = 4e-14
Identities = 13/120 (10%), Positives = 35/120 (29%), Gaps = 1/120 (0%)
Query: 78 LKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHW 137
R+ P +++ + + + + + N R++
Sbjct: 20 YDKKPTRSWRRASSEVKNSHEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIH-VV 78
Query: 138 HGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMII 197
H Q + + P+ + + A G + + VG + G++ +I
Sbjct: 79 HFHGQTLLENGTQQHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVGEIQRAGMQTPFLI 138
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus)
[TaxId: 9913]}
Length = 116
Score = 65.5 bits (159), Expect = 9e-14
Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 8/95 (8%)
Query: 102 SINRQLPG--PSIQVCKGDTIIVDVKNHMIDREV-TLHWHGVYQKVTPWMDGVPMVTQCP 158
++N + G P I VC D I + E+ ++H++G ++
Sbjct: 25 TVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNG-----QVLEQNHHKISAIT 79
Query: 159 IPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEG 193
+ S+T+ P G + S + G++
Sbjct: 80 LVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQA 114
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 145
Score = 64.8 bits (157), Expect = 3e-13
Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 6/99 (6%)
Query: 102 SINRQLPG--PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPI 159
S+N + G P + +CKGD+++ + + + HG+Y ++ +
Sbjct: 49 SMNGFMYGNQPGLTMCKGDSVVWYLFSAGNEA----DVHGIYFSGNTYLWRGERRDTANL 104
Query: 160 PSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIR 198
T+ GTF G++ +
Sbjct: 105 FPQTSLTLHMWPDTEGTFNVECLTTDHYTGGMKQKYTVN 143
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 146
Score = 61.8 bits (149), Expect = 3e-12
Identities = 13/99 (13%), Positives = 28/99 (28%), Gaps = 6/99 (6%)
Query: 102 SINRQLPG--PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPI 159
S+N G P + +C D + + + H + + + +
Sbjct: 50 SVNGYTFGSLPGLSMCAEDRVKWYLFGMGNEV----DVHAAFFHGQALTNKNYRIDTINL 105
Query: 160 PSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIR 198
+T F A G + GL+ ++
Sbjct: 106 FPATLFDAYMVAQNPGEWMLSCQNLNHLKAGLQAFFQVQ 144
>d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus
subtilis [TaxId: 1423]}
Length = 174
Score = 61.7 bits (149), Expect = 6e-12
Identities = 23/133 (17%), Positives = 49/133 (36%), Gaps = 7/133 (5%)
Query: 211 DFDLYSHVIIVTDWMHSMTDS-KFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFF 269
++D+ +++TD + S +P N + P+ ++ +
Sbjct: 6 EYDV---PLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGE-TILVNGKVWPYL 61
Query: 270 KVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE-PLVVDSVTLFPGDRVDV 328
+V+ +Y R+I S + I SDG + + ++S +L P +R D+
Sbjct: 62 EVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDI 120
Query: 329 IIHTNQSNNLYWM 341
II +
Sbjct: 121 IIDFTAYEGESII 133
Score = 33.9 bits (77), Expect = 0.015
Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Query: 387 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE-PLVVDSVTLFP 445
+ +V+ +Y R+I S + I SDG + + ++S +L P
Sbjct: 56 KVWPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAP 114
>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos
taurus) [TaxId: 9913]}
Length = 67
Score = 44.2 bits (104), Expect = 8e-07
Identities = 13/64 (20%), Positives = 21/64 (32%), Gaps = 12/64 (18%)
Query: 158 PIPSSTTFRYKFPAMPSG----------TFFYHSHV--GLQKMDGLEGSMIIRTPKTADP 205
I + T+ Y + A + Y+S V GL G ++I T D
Sbjct: 2 AIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDK 61
Query: 206 HAEL 209
+
Sbjct: 62 ETNM 65
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria
gonorrhoeae, AniA [TaxId: 485]}
Length = 151
Score = 43.6 bits (102), Expect = 8e-06
Identities = 14/100 (14%), Positives = 36/100 (36%), Gaps = 6/100 (6%)
Query: 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDG----VPMVTQCPIPSSTTF 165
+++ G+T+ + V N + + H G +++G V +P+ +
Sbjct: 51 NALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKV-YVEGGKLINENVQSTIVPAGGSA 109
Query: 166 RYKFPAMPSGTFFYHSHVGLQKMD-GLEGSMIIRTPKTAD 204
+F G + H + + G G + + + +
Sbjct: 110 IVEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAENPE 149
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas
europaea [TaxId: 915]}
Length = 112
Score = 32.8 bits (74), Expect = 0.019
Identities = 20/108 (18%), Positives = 35/108 (32%), Gaps = 16/108 (14%)
Query: 91 VTADG-FERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMD 149
+ +G + I + N ++ V KGD + V V+N +
Sbjct: 18 LNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENK----SPISEGFSIDA------- 66
Query: 150 GVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMII 197
Q I + T F A +G F + K L G++ +
Sbjct: 67 ---FGVQEVIKAGETKTISFTADKAGAFTIWCQL-HPKNIHLPGTLNV 110
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus
cinereus) [TaxId: 5346]}
Length = 200
Score = 31.7 bits (71), Expect = 0.11
Identities = 17/105 (16%), Positives = 31/105 (29%), Gaps = 8/105 (7%)
Query: 108 PGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPI-------- 159
G ++ + + + V ++ H HG V P+
Sbjct: 68 AGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLG 127
Query: 160 PSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTAD 204
+ +F G +F+H H+ M+GL T D
Sbjct: 128 VTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTVD 172
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia
coli [TaxId: 562]}
Length = 181
Score = 29.6 bits (66), Expect = 0.47
Identities = 11/83 (13%), Positives = 19/83 (22%), Gaps = 9/83 (10%)
Query: 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIP--------- 160
P KG + H HG ++ P +
Sbjct: 85 PMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVEGNV 144
Query: 161 SSTTFRYKFPAMPSGTFFYHSHV 183
S ++ A + H H+
Sbjct: 145 SEVLVKFNHDAPKEHAYMAHCHL 167
>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 28.3 bits (62), Expect = 1.9
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 158 PIPSSTTFRYKFPAMPSGTFFY 179
PI STTF+ PA P GT+ Y
Sbjct: 28 PISLSTTFKQSSPANPIGTYEY 49
>d2vn6a1 b.2.2.2 (A:12-152) Cohesin domain {Clostridium
cellulolyticum [TaxId: 1521]}
Length = 141
Score = 26.4 bits (58), Expect = 4.0
Identities = 13/60 (21%), Positives = 18/60 (30%), Gaps = 8/60 (13%)
Query: 313 LVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTLCDSITAEAVLQYEGEKLTYVSKRPKS 372
+ V + PGD V V + K + T L Y+ L VS
Sbjct: 4 VTVGTANGKPGDTVTVPVTFADVAK-----MKNVG---TCNFYLGYDASLLEVVSVDAGP 55
>d1vyia_ d.293.1.1 (A:) Phosphoprotein M1, C-terminal domain {Rabies
virus, strain CVS-11 [TaxId: 11292]}
Length = 111
Score = 26.0 bits (57), Expect = 4.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 159 IPSSTTFRYKFPAMPSGTFFYH 180
I S + +YKFP+ SG F Y+
Sbjct: 20 IAESFSKKYKFPSRSSGIFLYN 41
>d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes
xylosoxidans [TaxId: 85698]}
Length = 173
Score = 26.4 bits (58), Expect = 5.8
Identities = 18/98 (18%), Positives = 33/98 (33%), Gaps = 14/98 (14%)
Query: 122 VDVKNHMIDREVTLHWHG-----VYQ--KVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPS 174
V V + +R+ H G V+ K D P ++ Y F
Sbjct: 76 VLVVHSQANRDTRPHLIGGHGDYVWATGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ--P 133
Query: 175 GTFFYHSHVGLQKMD-GLEGSMIIRTPKTADPHAELYD 211
G + Y +H ++ + G G + T + + +L
Sbjct: 134 GVYAYVNHNLIEAFELGAAGHFKV----TGEWNDDLMT 167
>d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId:
1108]}
Length = 139
Score = 26.0 bits (56), Expect = 6.6
Identities = 11/110 (10%), Positives = 26/110 (23%), Gaps = 26/110 (23%)
Query: 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCP----------- 158
S+ + + +D N H + T
Sbjct: 32 TSLSLPANTVVRLDFVNQ----NNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP 87
Query: 159 -----------IPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMII 197
+ + + F GT+ Y + G++G++ +
Sbjct: 88 DTPNALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTV 137
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.137 0.426
Gapped
Lambda K H
0.267 0.0587 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,718,797
Number of extensions: 81582
Number of successful extensions: 287
Number of sequences better than 10.0: 1
Number of HSP's gapped: 225
Number of HSP's successfully gapped: 45
Length of query: 445
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 357
Effective length of database: 1,199,356
Effective search space: 428170092
Effective search space used: 428170092
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (24.9 bits)