BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16564
(157 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P46405|RS12_PIG 40S ribosomal protein S12 OS=Sus scrofa GN=RPS12 PE=2 SV=2
Length = 132
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/103 (74%), Positives = 88/103 (85%)
Query: 31 GVSDINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALC 90
GV D+N ALQ+VLKTA HDGLA+G+ EAAKALD+R+A LCVLA NCDEP Y KLV+ALC
Sbjct: 10 GVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALC 69
Query: 91 SEHQIPLIKVDNNKKLGEWAGLSKLDNMGKARKVVGCSCVVIK 133
+EHQI LIKVD+NKKLGEW GL K+D GK RKVVGCSCVV+K
Sbjct: 70 AEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVK 112
>sp|P25398|RS12_HUMAN 40S ribosomal protein S12 OS=Homo sapiens GN=RPS12 PE=1 SV=3
Length = 132
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/103 (74%), Positives = 88/103 (85%)
Query: 31 GVSDINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALC 90
GV D+N ALQ+VLKTA HDGLA+G+ EAAKALD+R+A LCVLA NCDEP Y KLV+ALC
Sbjct: 10 GVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALC 69
Query: 91 SEHQIPLIKVDNNKKLGEWAGLSKLDNMGKARKVVGCSCVVIK 133
+EHQI LIKVD+NKKLGEW GL K+D GK RKVVGCSCVV+K
Sbjct: 70 AEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVK 112
>sp|P84175|RS12_CHICK 40S ribosomal protein S12 OS=Gallus gallus GN=RPS12 PE=1 SV=2
Length = 132
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/103 (74%), Positives = 88/103 (85%)
Query: 31 GVSDINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALC 90
GV D+N ALQ+VLKTA HDGLA+G+ EAAKALD+R+A LCVLA NCDEP Y KLV+ALC
Sbjct: 10 GVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALC 69
Query: 91 SEHQIPLIKVDNNKKLGEWAGLSKLDNMGKARKVVGCSCVVIK 133
+EHQI LIKVD+NKKLGEW GL K+D GK RKVVGCSCVV+K
Sbjct: 70 AEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVK 112
>sp|Q76I81|RS12_BOVIN 40S ribosomal protein S12 OS=Bos taurus GN=RPS12 PE=2 SV=1
Length = 132
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/103 (74%), Positives = 88/103 (85%)
Query: 31 GVSDINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALC 90
GV D+N ALQ+VLKTA HDGLA+G+ EAAKALD+R+A LCVLA NCDEP Y KLV+ALC
Sbjct: 10 GVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALC 69
Query: 91 SEHQIPLIKVDNNKKLGEWAGLSKLDNMGKARKVVGCSCVVIK 133
+EHQI LIKVD+NKKLGEW GL K+D GK RKVVGCSCVV+K
Sbjct: 70 AEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVK 112
>sp|P47840|RS12_XENLA 40S ribosomal protein S12 OS=Xenopus laevis GN=rps12 PE=2 SV=2
Length = 132
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/103 (73%), Positives = 87/103 (84%)
Query: 31 GVSDINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALC 90
GV D+N ALQ+VLKTA HDGLA+G+ EAAKALD+R+A LCVLA NCDEP Y KLV+ALC
Sbjct: 10 GVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALC 69
Query: 91 SEHQIPLIKVDNNKKLGEWAGLSKLDNMGKARKVVGCSCVVIK 133
+E QI LIKVD+NKKLGEW GL K+D GK RKVVGCSCVV+K
Sbjct: 70 AEPQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVK 112
>sp|P63324|RS12_RAT 40S ribosomal protein S12 OS=Rattus norvegicus GN=Rps12 PE=1 SV=2
Length = 132
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/103 (73%), Positives = 87/103 (84%)
Query: 31 GVSDINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALC 90
GV D+N ALQ+VLKTA HDGLA+G+ EAAKALD+R+A LCVLA NCDEP Y KLV+AL
Sbjct: 10 GVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALL 69
Query: 91 SEHQIPLIKVDNNKKLGEWAGLSKLDNMGKARKVVGCSCVVIK 133
+EHQI LIKVD+NKKLGEW GL K+D GK RKVVGCSCVV+K
Sbjct: 70 AEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVK 112
>sp|P63323|RS12_MOUSE 40S ribosomal protein S12 OS=Mus musculus GN=Rps12 PE=1 SV=2
Length = 132
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/103 (73%), Positives = 87/103 (84%)
Query: 31 GVSDINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALC 90
GV D+N ALQ+VLKTA HDGLA+G+ EAAKALD+R+A LCVLA NCDEP Y KLV+AL
Sbjct: 10 GVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALL 69
Query: 91 SEHQIPLIKVDNNKKLGEWAGLSKLDNMGKARKVVGCSCVVIK 133
+EHQI LIKVD+NKKLGEW GL K+D GK RKVVGCSCVV+K
Sbjct: 70 AEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVK 112
>sp|O13019|RS12_ORENI 40S ribosomal protein S12 OS=Oreochromis niloticus GN=rps12 PE=2
SV=3
Length = 132
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/103 (73%), Positives = 86/103 (83%)
Query: 31 GVSDINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALC 90
GV D+N AL +VLKTA HDGLA G+ EAAKALD+R+A LCVLA NCDEP Y KLV+ALC
Sbjct: 10 GVMDVNTALPEVLKTALIHDGLAPGIREAAKALDKRQAHLCVLAANCDEPMYVKLVEALC 69
Query: 91 SEHQIPLIKVDNNKKLGEWAGLSKLDNMGKARKVVGCSCVVIK 133
+EHQI LIKVD+NKKLGEW GL K+D GK RKVVGCSCVV+K
Sbjct: 70 AEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVK 112
>sp|P80455|RS12_DROME 40S ribosomal protein S12 OS=Drosophila melanogaster GN=RpS12 PE=2
SV=2
Length = 139
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/113 (63%), Positives = 89/113 (78%), Gaps = 2/113 (1%)
Query: 23 NVPSAND--EGVSDINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEP 80
+VPSA +G DIN ALQ+VLK + DGL G+H+A KALD+R+A LC+LA++ DEP
Sbjct: 7 DVPSAAPVLDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCILAESFDEP 66
Query: 81 AYKKLVQALCSEHQIPLIKVDNNKKLGEWAGLSKLDNMGKARKVVGCSCVVIK 133
YKKLV ALC+EHQIPLI+VD++KKLGEW+GL K+D GK RKV GCS VVIK
Sbjct: 67 NYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIK 119
>sp|O59936|RS12_ERYGR 40S ribosomal protein S12 OS=Erysiphe graminis subsp. hordei
GN=RPS12 PE=3 SV=1
Length = 132
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/131 (55%), Positives = 93/131 (70%), Gaps = 6/131 (4%)
Query: 27 ANDEGVSDINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLV 86
A +G + AL+ L+TA HDGLA+GL EA+KALDRREA +CVL + C+E AYKKL+
Sbjct: 6 ATPKGQMTVLDALKGALRTALMHDGLARGLREASKALDRREAHMCVLNEACEEEAYKKLI 65
Query: 87 QALCSEHQIPLIKVDNNKKLGEWAGLSKLDNMGKARKVVGCSCVVIKVRNWFLIICSRKS 146
ALCSEH+IPLIKV + K+LGEWAGL LD G ARKVV CSCVV+K NW S
Sbjct: 66 VALCSEHKIPLIKVPDGKQLGEWAGLCVLDREGNARKVVNCSCVVVK--NWG----EESS 119
Query: 147 TQVLSVNYNKS 157
+++ +NY ++
Sbjct: 120 ERMMLLNYFQT 130
>sp|Q9SMI3|RS12_CYAPA 40S ribosomal protein S12 OS=Cyanophora paradoxa GN=RPS12 PE=2 SV=1
Length = 136
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/107 (64%), Positives = 80/107 (74%)
Query: 26 SANDEGVSDINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKL 85
A G D+ AL++VLK A DGL +GLHE AKALD+R AQLCVLA N +EPAY +L
Sbjct: 10 EAAPSGTMDVMTALKEVLKKAMVVDGLKRGLHECAKALDQRSAQLCVLAANVNEPAYTRL 69
Query: 86 VQALCSEHQIPLIKVDNNKKLGEWAGLSKLDNMGKARKVVGCSCVVI 132
V+ALC+EH I LIKV NK+LGEW GL K+D GKARKVVGCSC VI
Sbjct: 70 VEALCAEHGINLIKVPENKQLGEWVGLCKIDKEGKARKVVGCSCAVI 116
>sp|P49196|RS12_CAEEL 40S ribosomal protein S12 OS=Caenorhabditis elegans GN=rps-12 PE=1
SV=2
Length = 140
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 81/113 (71%), Gaps = 2/113 (1%)
Query: 25 PSANDEGVSDINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKK 84
P+A +G D AL+ VL+ A DGLAKGLHE KALD+REA CVLA+NCDEP Y K
Sbjct: 12 PAAVAQGPMDKEGALRAVLRAAHHADGLAKGLHETCKALDKREAHFCVLAENCDEPQYVK 71
Query: 85 LVQALCSEHQIPLIKVDNNKKLGEWAGLSKLDNMGKARKVVGCSCVVIKVRNW 137
LV+ LC+EHQIPLIKV + K +GE+ GL K D GKARKVVGCS V V NW
Sbjct: 72 LVETLCAEHQIPLIKVADKKIIGEYCGLCKYDKEGKARKVVGCSSAV--VTNW 122
>sp|Q9XHS0|RS12_HORVU 40S ribosomal protein S12 OS=Hordeum vulgare GN=RPS12 PE=2 SV=1
Length = 143
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 80/100 (80%)
Query: 34 DINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEH 93
D+ ALQ V+K + AHDGL KGL EAAK++++ AQLCVLA++CD+P Y KLV+ALC+EH
Sbjct: 25 DLMTALQLVMKKSSAHDGLVKGLREAAKSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEH 84
Query: 94 QIPLIKVDNNKKLGEWAGLSKLDNMGKARKVVGCSCVVIK 133
+ L+ V + K LGEWAGL K+D GKARKVVGCSC+V+K
Sbjct: 85 NVHLVTVPSAKTLGEWAGLCKIDTEGKARKVVGCSCIVVK 124
>sp|O14062|RS12A_SCHPO 40S ribosomal protein S12-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps12a PE=3 SV=1
Length = 145
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 77/98 (78%)
Query: 35 INKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEHQ 94
+ AL++VLK A HDGLA+G+ EA+KALDRR+A LCVL ++CD+ AY KLV+ALC+E +
Sbjct: 29 VEDALKEVLKRALVHDGLARGIREASKALDRRQAHLCVLCESCDQEAYVKLVEALCAESE 88
Query: 95 IPLIKVDNNKKLGEWAGLSKLDNMGKARKVVGCSCVVI 132
PLIKV + K LGEWAGL LD G ARKVVGCSCV +
Sbjct: 89 TPLIKVADPKVLGEWAGLCVLDRDGNARKVVGCSCVAV 126
>sp|O74322|RS12B_SCHPO 40S ribosomal protein S12-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps12b PE=3 SV=1
Length = 148
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 61/98 (62%), Positives = 77/98 (78%)
Query: 35 INKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEHQ 94
+ +L++VLK A HDGLA+G+ EA+KALDRR+A LCVL ++CD+ AY KLV+ALC+E Q
Sbjct: 32 VEDSLKEVLKRALVHDGLARGIREASKALDRRQAHLCVLCESCDQEAYVKLVEALCAESQ 91
Query: 95 IPLIKVDNNKKLGEWAGLSKLDNMGKARKVVGCSCVVI 132
PL+KV + K LGEWAGL LD G ARKVVGCSCV +
Sbjct: 92 TPLVKVADPKILGEWAGLCVLDRDGNARKVVGCSCVAV 129
>sp|Q9SKZ3|RS122_ARATH 40S ribosomal protein S12-2 OS=Arabidopsis thaliana GN=RPS12C PE=2
SV=1
Length = 144
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 81/100 (81%)
Query: 34 DINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEH 93
D++ AL+ ++ +RA+ G+ +GLHE+AK +++R AQLCVLA++C++P Y KLV+ALC++H
Sbjct: 26 DVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNAQLCVLAEDCNQPDYVKLVKALCADH 85
Query: 94 QIPLIKVDNNKKLGEWAGLSKLDNMGKARKVVGCSCVVIK 133
I L+ V + K LGEWAGL K+D+ G ARKVVGCSC+VIK
Sbjct: 86 SIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVIK 125
>sp|Q54PX9|RS12_DICDI 40S ribosomal protein S12 OS=Dictyostelium discoideum GN=rps12 PE=1
SV=1
Length = 136
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 77/101 (76%)
Query: 33 SDINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSE 92
+D ALQ+V+K + A G+A+GLHE KALD+R A+LCVLA NCDEP + +LV+AL +E
Sbjct: 17 TDPMVALQKVIKESLAVQGVARGLHETVKALDKRTARLCVLASNCDEPNFVRLVKALATE 76
Query: 93 HQIPLIKVDNNKKLGEWAGLSKLDNMGKARKVVGCSCVVIK 133
H IPLI+V +NK LGEWAGL KLD ARKVV CS +VIK
Sbjct: 77 HNIPLIEVPDNKALGEWAGLCKLDKDLAARKVVACSTLVIK 117
>sp|Q9S9P1|RS121_ARATH 40S ribosomal protein S12-1 OS=Arabidopsis thaliana GN=RPS12A PE=2
SV=1
Length = 144
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 79/100 (79%)
Query: 34 DINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEH 93
D+ AL+ L+ ARA+ G+ +GLHE AK +++R AQL VLA++C++P Y KLV+ALC++H
Sbjct: 26 DLMTALELTLRKARAYGGVVRGLHECAKLIEKRVAQLVVLAEDCNQPDYVKLVKALCADH 85
Query: 94 QIPLIKVDNNKKLGEWAGLSKLDNMGKARKVVGCSCVVIK 133
++ L+ V + K LGEWAGL K+D+ G ARKVVGCSC+V+K
Sbjct: 86 EVRLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVVK 125
>sp|O97249|RS12_PLAF7 40S ribosomal protein S12 OS=Plasmodium falciparum (isolate 3D7)
GN=RPS12 PE=3 SV=1
Length = 141
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 75/114 (65%), Gaps = 1/114 (0%)
Query: 20 ATDNVPSANDEGVSDINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDE 79
+ DN ++ V D A+Q+V+K A HDGL G+ E K+++ +EA++C L+D C E
Sbjct: 6 SADNNVVVEEKAVFDNVTAIQKVIKNAHVHDGLKIGIREVIKSIESQEAKVCFLSDVCSE 65
Query: 80 PAYKKLVQALCSEHQIPLIKVDNNKK-LGEWAGLSKLDNMGKARKVVGCSCVVI 132
PAYKKL+ LC+E IPL V N+ K LG WAGL KLDN G ARK++G S V +
Sbjct: 66 PAYKKLITTLCAEKNIPLFMVQNDSKDLGHWAGLFKLDNEGNARKIIGASSVAV 119
>sp|Q03253|RS12_TRYBB 40S ribosomal protein S12 OS=Trypanosoma brucei brucei GN=RPS12
PE=2 SV=2
Length = 144
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 4 EKTKLKTTKIVVVQGTATDNVPSANDEGVSDINKALQQVLKTARAHDGLAKGLHEAAKAL 63
E+T L K V + D V A + + D AL+ VL AR +GL GL E +AL
Sbjct: 3 EETSLVADK--VPEPAVIDAVADAMPDSLED---ALRIVLMKARETNGLICGLSEVTRAL 57
Query: 64 DRREAQLCVLADNCDEPAYKKLVQALCSEHQIPLIKVDNNKKLGEWAGLSKLDNMGKARK 123
DRR A LCVLAD+C++ YKKLV AL ++ I L+ +D +KL +WAGL+++ G RK
Sbjct: 58 DRRTAHLCVLADDCEDEEYKKLVTALAKQNNIDLVSMDEREKLAQWAGLTRMAADGSVRK 117
Query: 124 VVGCSCVVIK 133
+ CSC+ ++
Sbjct: 118 TLKCSCLAVR 127
>sp|P48589|RS12_YEAST 40S ribosomal protein S12 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPS12 PE=1 SV=1
Length = 143
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 2/91 (2%)
Query: 35 INKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCS--E 92
I AL+ VL+TA HDGLA+GL E+ KAL R EA L VL + E KLV+ L + E
Sbjct: 24 IEDALKVVLRTALVHDGLARGLRESTKALTRGEALLVVLVSSVTEANIIKLVEGLANDPE 83
Query: 93 HQIPLIKVDNNKKLGEWAGLSKLDNMGKARK 123
+++PLIKV + K+LGEWAGL K+D G ARK
Sbjct: 84 NKVPLIKVADAKQLGEWAGLGKIDREGNARK 114
>sp|Q9YAX7|RL7A_AERPE 50S ribosomal protein L7Ae OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl7ae
PE=1 SV=1
Length = 127
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 33 SDINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSE 92
D+ + + +K AR + KG +E KA++R A+L V+A++ D P + LC E
Sbjct: 13 EDLAEKAYEAVKRARETGRIKKGTNETTKAVERGLAKLVVIAEDVDPPEIVMHLPLLCDE 72
Query: 93 HQIPLIKVDNNKKLGEWAGLS 113
+IP + V + K+LGE AG+
Sbjct: 73 KKIPYVYVPSKKRLGEAAGIE 93
>sp|B8D6E8|RL7A_DESK1 50S ribosomal protein L7Ae OS=Desulfurococcus kamchatkensis (strain
1221n / DSM 18924) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%)
Query: 36 NKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEHQI 95
+K Q + K + KG +E KA++R +A+L V+A++ D P + LC E +I
Sbjct: 17 DKVYQAISKVRETGGKIKKGTNETTKAVERGQAKLVVIAEDVDPPEIVAHLPLLCDEKKI 76
Query: 96 PLIKVDNNKKLGEWAGL 112
P + V + +KLG+ AG+
Sbjct: 77 PYVYVPSKQKLGQAAGI 93
>sp|A3DMR6|RL7A_STAMF 50S ribosomal protein L7Ae OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=rpl7ae PE=3 SV=1
Length = 128
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 33 SDINKALQQVLKTARAHDG-LAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCS 91
++ + + + +K AR G + KG +E KA++R A+L ++A++ D P + LC
Sbjct: 13 PELAEKVYEAVKKARETGGKIKKGTNETTKAVERGIAKLVIIAEDVDPPEIVAHLPLLCD 72
Query: 92 EHQIPLIKVDNNKKLGEWAGLS 113
E +IP + V + K+LGE AG+
Sbjct: 73 EKKIPYVYVPSKKRLGEAAGIE 94
>sp|B1Y9V4|RL7A_PYRNV 50S ribosomal protein L7Ae OS=Pyrobaculum neutrophilum (strain DSM
2338 / JCM 9278 / V24Sta) GN=rpl7ae PE=3 SV=1
Length = 151
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 33 SDINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSE 92
+D+ + +VL A+ + KG +EA KA++R A+L ++A++ D P + LC E
Sbjct: 28 ADVAEKALEVLSVAKQTGKIKKGTNEATKAVERGLAKLVLIAEDVDPPEVVAHLPLLCEE 87
Query: 93 HQIPLIKVDNNKKLGEWAGL 112
++P + V + +KLG+ AG+
Sbjct: 88 KKVPYVYVPSKEKLGKAAGI 107
>sp|A8A912|RL7A_IGNH4 50S ribosomal protein L7Ae OS=Ignicoccus hospitalis (strain KIN4/I
/ DSM 18386 / JCM 14125) GN=rpl7ae PE=3 SV=1
Length = 128
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 41 QVLKTARAHDG-LAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEHQIPLIK 99
+ L+ AR G + KG +E KA+D+ A+L ++A++ D P + LC E +IP +
Sbjct: 21 EALRKARESGGKIKKGTNETTKAVDKGLAKLVLIAEDVDPPEIVAHLPLLCEEKKIPYVY 80
Query: 100 VDNNKKLGEWAGLS 113
V + KKLGE AG+
Sbjct: 81 VPSKKKLGEAAGIE 94
>sp|P62427|RL7A_NANEQ 50S ribosomal protein L7Ae OS=Nanoarchaeum equitans (strain Kin4-M)
GN=rpl7ae PE=3 SV=1
Length = 125
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%)
Query: 22 DNVPSANDEGVSDINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPA 81
+ P E ++ + ++++ AR + KG +E KA++R +A+L ++A+N + P
Sbjct: 3 EKPPYVKFEVPEELANKVYELVRKARETGKIRKGTNETTKAVERGQAKLVIIAENVNPPE 62
Query: 82 YKKLVQALCSEHQIPLIKVDNNKKLGEWAGLS 113
+ ALC E +P + V + ++LG+ AG++
Sbjct: 63 IVMHLPALCEEKGVPYVYVPSKEELGKAAGIN 94
>sp|Q5JGR3|RL7A_PYRKO 50S ribosomal protein L7Ae OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rpl7ae PE=3 SV=2
Length = 123
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 36 NKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEHQI 95
KAL+ V + AR + KG +E KA++R +A+L ++A++ D + LC E +I
Sbjct: 17 EKALEAV-EIARDTGRIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEI 75
Query: 96 PLIKVDNNKKLGEWAGLS------KLDNMGKARKVV 125
P + V + K+LG AGL + GKAR++V
Sbjct: 76 PYVYVPSKKELGAAAGLEVPAASVAIIEPGKARELV 111
>sp|Q8ZTA5|RL7A_PYRAE 50S ribosomal protein L7Ae OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rpl7ae PE=3 SV=1
Length = 151
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 34 DINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEH 93
D+ + ++L AR + KG +E KA++R A+L ++A++ D P + LC E
Sbjct: 29 DVAEKALEILSIARQTGKIKKGTNETTKAVERGLAKLVLIAEDVDPPEVVAHLPLLCEEK 88
Query: 94 QIPLIKVDNNKKLGEWAGL 112
++P + V + +KLG+ AG+
Sbjct: 89 KVPYVYVPSKEKLGKAAGI 107
>sp|A2BK92|RL7A_HYPBU 50S ribosomal protein L7Ae OS=Hyperthermus butylicus (strain DSM
5456 / JCM 9403) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 41 QVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEHQIPLIKV 100
Q L+ AR + KG +E K ++R A+L ++A++ D P + LC E +IP + V
Sbjct: 21 QALEIARKTGKIKKGTNETTKCVERGLAKLVLIAEDVDPPEIVAHLPLLCEEKKIPYVYV 80
Query: 101 DNNKKLGEWAGLS 113
+ K+LGE AG+
Sbjct: 81 PSKKRLGEAAGIE 93
>sp|B6YWH9|RL7A_THEON 50S ribosomal protein L7Ae OS=Thermococcus onnurineus (strain NA1)
GN=rpl7ae PE=3 SV=1
Length = 123
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 36 NKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEHQI 95
KAL+ V + AR + KG +E KA++R +A+L ++A++ D + LC E +I
Sbjct: 17 EKALEAV-ELARDTGRIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEI 75
Query: 96 PLIKVDNNKKLGEWAGLS------KLDNMGKARKVVGCSCVVIKVRNWF 138
P I V + K+LG AG+ + GK R++V + +KVR
Sbjct: 76 PYIYVPSKKELGAAAGIEVPAASVAIIEPGKGRELV--EEIAMKVRELM 122
>sp|A3MTA9|RL7A_PYRCJ 50S ribosomal protein L7Ae OS=Pyrobaculum calidifontis (strain JCM
11548 / VA1) GN=rpl7ae PE=3 SV=1
Length = 149
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 33 SDINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSE 92
SD+ + ++L AR + KG +E KA++R A+L ++A++ D P + LC E
Sbjct: 28 SDVAEKALEILSIARQTGKIKKGTNETTKAVERGLAKLVLIAEDVDPPEVVAHLPLLCEE 87
Query: 93 HQIPLIKVDNNKKLG 107
++P + V + +KLG
Sbjct: 88 KKVPYVYVPSKEKLG 102
>sp|P62009|RL7A_PYRHO 50S ribosomal protein L7Ae OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl7ae PE=1 SV=1
Length = 123
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 36 NKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEHQI 95
KALQ V + AR + KG +E KA++R +A+L ++A++ D + LC E +I
Sbjct: 17 EKALQAV-EIARDTGKIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEI 75
Query: 96 PLIKVDNNKKLGEWAGLSK------LDNMGKARKVVGCSCVVIKVRNWF 138
P I V + K+LG AG+ + GKAR +V + +KVR
Sbjct: 76 PYIYVPSKKELGAAAGIEVAAASVAIIEPGKARDLV--EEIAMKVRELM 122
>sp|P62008|RL7A_PYRAB 50S ribosomal protein L7Ae OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rpl7ae PE=1 SV=1
Length = 123
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 36 NKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEHQI 95
KALQ V + AR + KG +E KA++R +A+L ++A++ D + LC E +I
Sbjct: 17 EKALQAV-EIARDTGKIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEI 75
Query: 96 PLIKVDNNKKLGEWAGLSK------LDNMGKARKVVGCSCVVIKVRNWF 138
P I V + K+LG AG+ + GKAR +V + +KVR
Sbjct: 76 PYIYVPSKKELGAAAGIEVAAASVAIIEPGKARDLV--EEIAMKVRELM 122
>sp|Q8U160|RL7A_PYRFU 50S ribosomal protein L7Ae OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rpl7ae PE=1 SV=2
Length = 123
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 36 NKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEHQI 95
KALQ V + AR + KG +E KA++R +A+L ++A++ D + LC E +I
Sbjct: 17 EKALQAV-EIARDTGKIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEI 75
Query: 96 PLIKVDNNKKLG 107
P I V + K+LG
Sbjct: 76 PYIYVPSKKELG 87
>sp|A4YIL9|RL7A_METS5 50S ribosomal protein L7Ae OS=Metallosphaera sedula (strain ATCC
51363 / DSM 5348) GN=rpl7ae PE=3 SV=1
Length = 125
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 36 NKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEHQI 95
KAL+ LK A+ + KG +EA KA++R +A+L ++A++ + LC E +I
Sbjct: 17 EKALE-ALKKAKETGKIRKGTNEATKAIERGQAKLVLIAEDVQPEEIVAHLPPLCEEKKI 75
Query: 96 PLIKVDNNKKLGEWAGL 112
P I V K +GE GL
Sbjct: 76 PYIYVPTKKGIGEACGL 92
>sp|A5UJN3|RL7A_METS3 50S ribosomal protein L7Ae OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=rpl7ae PE=3 SV=1
Length = 123
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 40 QQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEHQIPLIK 99
++ LKTA+ +AKG +E K ++R +A L V+A++ D + L E +IP I
Sbjct: 20 EEALKTAQDSGKVAKGTNEVTKFIERGDAALVVIAEDVDPAEIVAHIPVLADEKEIPYIY 79
Query: 100 VDNNKKLGEWAGLS 113
+ +++G AGL+
Sbjct: 80 LPTKEQVGGAAGLT 93
>sp|C5A1V9|RL7A_THEGJ 50S ribosomal protein L7Ae OS=Thermococcus gammatolerans (strain
DSM 15229 / JCM 11827 / EJ3) GN=rpl7ae PE=3 SV=1
Length = 123
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 36 NKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEHQI 95
KAL+ V + AR + KG +E KA++R +A+L ++A++ D + LC E +I
Sbjct: 17 EKALEAV-EIARDTGRIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEI 75
Query: 96 PLIKVDNNKKLG 107
P I V + K+LG
Sbjct: 76 PYIYVPSKKELG 87
>sp|Q4J8P1|RL7A_SULAC 50S ribosomal protein L7Ae OS=Sulfolobus acidocaldarius (strain
ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB
11770) GN=rpl7ae PE=3 SV=1
Length = 126
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 41 QVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEHQIPLIKV 100
+ +K A+ + KG +E KA++R +A+L V+A++ + LC E +IP + V
Sbjct: 21 EAVKKAKDSGKIKKGTNETTKAVERSQAKLVVIAEDVQPEEIVAHLPLLCEEKKIPYVYV 80
Query: 101 DNNKKLGEWAGL 112
+ K LGE GL
Sbjct: 81 PSKKSLGEACGL 92
>sp|C3N8Q2|RL7A_SULIY 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 34 DINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEH 93
D+ + + ++ A+ + KG +E KA++R +A+L V+A++ + LC E
Sbjct: 14 DLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEK 73
Query: 94 QIPLIKVDNNKKLGEWAGL 112
+IP + V + K LGE GL
Sbjct: 74 KIPYVYVSSKKALGEACGL 92
>sp|C3NMR6|RL7A_SULIN 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 34 DINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEH 93
D+ + + ++ A+ + KG +E KA++R +A+L V+A++ + LC E
Sbjct: 14 DLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEK 73
Query: 94 QIPLIKVDNNKKLGEWAGL 112
+IP + V + K LGE GL
Sbjct: 74 KIPYVYVSSKKALGEACGL 92
>sp|C3MYY9|RL7A_SULIM 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain M.14.25
/ Kamchatka #1) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 34 DINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEH 93
D+ + + ++ A+ + KG +E KA++R +A+L V+A++ + LC E
Sbjct: 14 DLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEK 73
Query: 94 QIPLIKVDNNKKLGEWAGL 112
+IP + V + K LGE GL
Sbjct: 74 KIPYVYVSSKKALGEACGL 92
>sp|C3MJN1|RL7A_SULIL 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 34 DINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEH 93
D+ + + ++ A+ + KG +E KA++R +A+L V+A++ + LC E
Sbjct: 14 DLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEK 73
Query: 94 QIPLIKVDNNKKLGEWAGL 112
+IP + V + K LGE GL
Sbjct: 74 KIPYVYVSSKKALGEACGL 92
>sp|C4KJ77|RL7A_SULIK 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain M.16.4
/ Kamchatka #3) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 34 DINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEH 93
D+ + + ++ A+ + KG +E KA++R +A+L V+A++ + LC E
Sbjct: 14 DLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEK 73
Query: 94 QIPLIKVDNNKKLGEWAGL 112
+IP + V + K LGE GL
Sbjct: 74 KIPYVYVSSKKALGEACGL 92
>sp|C3N038|RL7A_SULIA 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain
M.16.27) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 34 DINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEH 93
D+ + + ++ A+ + KG +E KA++R +A+L V+A++ + LC E
Sbjct: 14 DLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEK 73
Query: 94 QIPLIKVDNNKKLGEWAGL 112
+IP + V + K LGE GL
Sbjct: 74 KIPYVYVSSKKALGEACGL 92
>sp|Q466D1|RL7A_METBF 50S ribosomal protein L7Ae OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=rpl7ae PE=3 SV=1
Length = 120
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 36 NKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEHQI 95
NKAL+ L+ AR + KG +EA KA++R A+L ++A++ + + L E +
Sbjct: 15 NKALE-ALELARDTGKIKKGTNEATKAIERGNAKLVLIAEDIEPAEIIAHIAPLSEEKKA 73
Query: 96 PLIKVDNNKKLGEWAGLSKLDNMGKARKVVGCSCVVI 132
P I + N K+LG +GL V C+ V I
Sbjct: 74 PYIFIKNQKELGAASGLG-----------VSCATVAI 99
>sp|O29494|RL7A_ARCFU 50S ribosomal protein L7Ae OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rpl7ae PE=1 SV=1
Length = 119
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 36 NKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEHQI 95
N+AL +L+ R + KG +E KA++R A+L +A++ D P + LC E +
Sbjct: 13 NEALS-LLEKVRESGKVKKGTNETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNV 71
Query: 96 PLIKVDNNKKLGEWAGL------SKLDNMGKARKVVG 126
P I V + LG G+ + + N G+ RK +G
Sbjct: 72 PYIYVKSKNDLGRAVGIEVPCASAAIINEGELRKELG 108
>sp|Q8TQL9|RL7A_METAC 50S ribosomal protein L7Ae OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=rpl7ae PE=3
SV=1
Length = 120
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 36 NKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEHQI 95
NKAL+ L+ AR + KG +EA KA++R A+L ++A++ + + L E +
Sbjct: 15 NKALE-ALELARDTGKIKKGTNEATKAIERGNAKLVLIAEDIEPAEIVAHIGPLSEEKKA 73
Query: 96 PLIKVDNNKKLGEWAGLSKLDNMGKARKVVGCSCVVI 132
P I + N K+LG +GL V C+ V I
Sbjct: 74 PYIFIKNQKELGAASGLG-----------VSCATVAI 99
>sp|P55858|RL7A_SULSO 50S ribosomal protein L7Ae OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rpl7ae PE=1 SV=2
Length = 127
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%)
Query: 34 DINKALQQVLKTARAHDGLAKGLHEAAKALDRREAQLCVLADNCDEPAYKKLVQALCSEH 93
D+ + + ++ A+ + KG +E KA++R +A+L ++A++ + LC E
Sbjct: 14 DLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVIIAEDVQPEEIVAHLPLLCDEK 73
Query: 94 QIPLIKVDNNKKLGEWAGL 112
+IP + V + K LGE GL
Sbjct: 74 KIPYVYVSSKKALGEACGL 92
>sp|P24523|GA45A_CRIGR Growth arrest and DNA damage-inducible protein GADD45 alpha
OS=Cricetulus griseus GN=GADD45A PE=2 SV=1
Length = 165
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 30 EGVSDINKALQQVLKTARAHDGLAKGLHEAAKAL--DRREAQLCVLADNCDEP------A 81
E + + AL++VL AR+ + G++EAAK L D LC+LA + D+
Sbjct: 14 ERMDTVGDALEEVLSKARSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQI 73
Query: 82 YKKLVQALCSEHQIPLIKVDNNKKLGE 108
+ L+QA C E+ I +++V N +L E
Sbjct: 74 HFTLIQAFCCENDINILRVSNPGRLAE 100
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,608,670
Number of Sequences: 539616
Number of extensions: 1932300
Number of successful extensions: 5616
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 5502
Number of HSP's gapped (non-prelim): 132
length of query: 157
length of database: 191,569,459
effective HSP length: 108
effective length of query: 49
effective length of database: 133,290,931
effective search space: 6531255619
effective search space used: 6531255619
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)