BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16565
(377 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8ND76|CCNY_HUMAN Cyclin-Y OS=Homo sapiens GN=CCNY PE=1 SV=2
Length = 341
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/339 (63%), Positives = 258/339 (76%), Gaps = 20/339 (5%)
Query: 1 MGNKTSCCSYSTPTTQRKVHSKSSRFEEYVPEG----EESVGNLQHISEREPED---WET 53
MGN TSCC S+P +R HS R E Y P+ E++ NLQHIS+RE D E
Sbjct: 1 MGNTTSCCVSSSPKLRRNAHS---RLESYRPDTDLSREDTGCNLQHISDRENIDDLNMEF 57
Query: 54 DPSLHPKAGTIFLERSKLEQLVRVYQYNKNFSHIAADNRPLKKSSSCSTIYLDDSTVSQP 113
+PS HP+A TIFL +S+ + VR + + +H + +K SSCSTI+LDDSTVSQP
Sbjct: 58 NPSDHPRASTIFLSKSQTD--VREKRKSLFINH-HPPGQIARKYSSCSTIFLDDSTVSQP 114
Query: 114 NLKNTVKCSALAIYYYIKN--GNSYKYLEIFDEKLHPLTRDPVPEDYDRYPPEHRQIYKF 171
NLK T+KC ALAIYY+IKN + L+IFDE LHPL++ VP DYD++ PE +QIY+F
Sbjct: 115 NLKYTIKCVALAIYYHIKNRDPDGRMLLDIFDENLHPLSKSEVPPDYDKHNPEQKQIYRF 174
Query: 172 IRTLFNAAQLTAECAIITLVYLERLLTYAEVDITPGNWKRIVLGAILLASKVWDDQAVWN 231
+RTLF+AAQLTAECAI+TLVYLERLLTYAE+DI P NWKRIVLGAILLASKVWDDQAVWN
Sbjct: 175 VRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPANWKRIVLGAILLASKVWDDQAVWN 234
Query: 232 VDYCQILKDISVEDMNELERQFLEMLQFNINVPSSVYAKYYFDLRSLAESNDLTFPAEPL 291
VDYCQILKDI+VEDMNELERQFLE+LQFNINVPSSVYAKYYFDLRSLAE+N+L+FP EPL
Sbjct: 235 VDYCQILKDITVEDMNELERQFLELLQFNINVPSSVYAKYYFDLRSLAEANNLSFPLEPL 294
Query: 292 SKERAQKLEAMSIVYAKYYFDLRSLAE-----SNDLTFP 325
S+ERA KLEA+S + Y DLR A +++LT P
Sbjct: 295 SRERAHKLEAISRLCEDKYKDLRRSARKRSASADNLTLP 333
>sp|Q8BGU5|CCNY_MOUSE Cyclin-Y OS=Mus musculus GN=Ccny PE=1 SV=1
Length = 341
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/323 (65%), Positives = 251/323 (77%), Gaps = 15/323 (4%)
Query: 1 MGNKTSCCSYSTPTTQRKVHSKSSRFEEYVPEG----EESVGNLQHISEREPED---WET 53
MGN TSCC S+P +R HS R E Y P+ E++ NLQHIS+RE D E
Sbjct: 1 MGNTTSCCVSSSPKLRRNAHS---RLESYRPDTDLSREDTGCNLQHISDRENIDDLNMEF 57
Query: 54 DPSLHPKAGTIFLERSKLEQLVRVYQYNKNFSHIAADNRPLKKSSSCSTIYLDDSTVSQP 113
+PS HP+A TIFL +S+ + VR + + +H + +K SSCSTI+LDDSTVSQP
Sbjct: 58 NPSDHPRASTIFLSKSQTD--VREKRKSLFINH-HPPGQTSRKYSSCSTIFLDDSTVSQP 114
Query: 114 NLKNTVKCSALAIYYYIKN--GNSYKYLEIFDEKLHPLTRDPVPEDYDRYPPEHRQIYKF 171
NLK T+KC ALAIYY+IKN + L+IFDE LHPL++ VP DYD++ PE +QIY+F
Sbjct: 115 NLKYTIKCVALAIYYHIKNRDPDGRMLLDIFDENLHPLSKSEVPPDYDKHNPEQKQIYRF 174
Query: 172 IRTLFNAAQLTAECAIITLVYLERLLTYAEVDITPGNWKRIVLGAILLASKVWDDQAVWN 231
+RTLF+AAQLTAECAI+TLVYLERLLTYAE+DI P NWKRIVLGAILLASKVWDDQAVWN
Sbjct: 175 VRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPANWKRIVLGAILLASKVWDDQAVWN 234
Query: 232 VDYCQILKDISVEDMNELERQFLEMLQFNINVPSSVYAKYYFDLRSLAESNDLTFPAEPL 291
VDYCQILKDI+VEDMNELERQFLE+LQFNINVPSSVYAKYYFDLRSLAE+N+L+FP EPL
Sbjct: 235 VDYCQILKDITVEDMNELERQFLELLQFNINVPSSVYAKYYFDLRSLAEANNLSFPLEPL 294
Query: 292 SKERAQKLEAMSIVYAKYYFDLR 314
S+ERA KLEA+S + Y DLR
Sbjct: 295 SRERAHKLEAISRLCEDKYKDLR 317
>sp|Q08CI4|CCYL1_DANRE Cyclin-Y-like protein 1 OS=Danio rerio GN=ccnyl1 PE=2 SV=1
Length = 339
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/323 (62%), Positives = 253/323 (78%), Gaps = 11/323 (3%)
Query: 1 MGNKTSCCSYSTPTTQRKVHSKSSRFEEY---VPEGEESVGNLQHISERE-PEDW--ETD 54
MGN SCC +P+ K+ + R E+Y +++ LQHIS+RE P+D E++
Sbjct: 1 MGNTVSCCV--SPSGSPKLPRQVERLEDYQNNTDISDDTGPYLQHISDREVPDDLALESN 58
Query: 55 PSLHPKAGTIFLERSKLEQLVRVYQYNKNFSHIAADNRPLKKSSSCSTIYLDDSTVSQPN 114
PS H +A TIFL +S+ + VR + + + +H++ KK SSCSTI++DDSTVSQPN
Sbjct: 59 PSDHARASTIFLSKSQTD--VRDRRKSNHINHVSP-GLLSKKYSSCSTIFIDDSTVSQPN 115
Query: 115 LKNTVKCSALAIYYYIKNGNSYKYLEIFDEKLHPLTRDPVPEDYDRYPPEHRQIYKFIRT 174
LK+T+KC LAIYY+IKN +S + L+IFDEK+HPL+R+ VP+DY R PEH+ IY+F+RT
Sbjct: 116 LKSTIKCVTLAIYYHIKNRDSDRSLDIFDEKMHPLSREQVPDDYSRTDPEHKLIYRFVRT 175
Query: 175 LFNAAQLTAECAIITLVYLERLLTYAEVDITPGNWKRIVLGAILLASKVWDDQAVWNVDY 234
LF+AAQLTAECAI+TLVYLERLLTYAE+DI P NWKRIVLGAILLASKVWDDQAVWNVDY
Sbjct: 176 LFSAAQLTAECAIVTLVYLERLLTYAELDICPSNWKRIVLGAILLASKVWDDQAVWNVDY 235
Query: 235 CQILKDISVEDMNELERQFLEMLQFNINVPSSVYAKYYFDLRSLAESNDLTFPAEPLSKE 294
CQILKDI+VEDMNE+ER FLE+LQFNINVP+SVYAKYYFDLRSLA+ N+L+FP EPLS E
Sbjct: 236 CQILKDITVEDMNEMERHFLELLQFNINVPASVYAKYYFDLRSLADDNNLSFPLEPLSNE 295
Query: 295 RAQKLEAMSIVYAKYYFDLRSLA 317
RAQKLEA+S + Y DL +A
Sbjct: 296 RAQKLEAISRLCEDKYKDLSRVA 318
>sp|Q6NRF4|CCY1B_XENLA Cyclin-Y-like protein 1-B OS=Xenopus laevis GN=ccnyl1-b PE=2 SV=1
Length = 343
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/325 (61%), Positives = 252/325 (77%), Gaps = 11/325 (3%)
Query: 1 MGNKTSCCSYSTPTTQ----RKVHSKSSRFEEYVPEGEESVG-NLQHISERE-PEDW--E 52
MGN +CC + + R+V + ++ V E G +LQHIS+R+ P D+ E
Sbjct: 1 MGNTVTCCVSPDASPKAGRDRRVAERGEPYQTQVELQETDPGPHLQHISDRDFPSDFNDE 60
Query: 53 TDPSLHPKAGTIFLERSKLEQLVRVYQYNKNFSHIAADNRPLKKSSSCSTIYLDDSTVSQ 112
+PS HP+A TIFL +S+ + VR + + + +H++ + KK SSCSTI+LDDSTVSQ
Sbjct: 61 CNPSDHPQASTIFLSKSQTD--VREKRKSNHINHVSP-GQLTKKYSSCSTIFLDDSTVSQ 117
Query: 113 PNLKNTVKCSALAIYYYIKNGNSYKYLEIFDEKLHPLTRDPVPEDYDRYPPEHRQIYKFI 172
PNL++T+KC LAIYY+IKN +S + L+IFDEKLHPLTR+ V +DY ++ P+H+ IY+F+
Sbjct: 118 PNLRSTIKCVTLAIYYHIKNRDSDRSLDIFDEKLHPLTREEVTDDYCKHDPDHKHIYRFV 177
Query: 173 RTLFNAAQLTAECAIITLVYLERLLTYAEVDITPGNWKRIVLGAILLASKVWDDQAVWNV 232
RTLF+AAQLTAECAI+TLVYLERLLTYAE+DI P NWKRIVLGAILLASKVWDDQAVWNV
Sbjct: 178 RTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPSNWKRIVLGAILLASKVWDDQAVWNV 237
Query: 233 DYCQILKDISVEDMNELERQFLEMLQFNINVPSSVYAKYYFDLRSLAESNDLTFPAEPLS 292
DYCQILKDI+VEDMNE+ER FLE+LQFNINVP+SVYAKYYFDLRSLA+ N+L+F EPLS
Sbjct: 238 DYCQILKDITVEDMNEMERHFLELLQFNINVPASVYAKYYFDLRSLADDNNLSFLLEPLS 297
Query: 293 KERAQKLEAMSIVYAKYYFDLRSLA 317
KERAQKLEA+S + Y DL A
Sbjct: 298 KERAQKLEAISRLCEDKYKDLSKAA 322
>sp|Q28EL0|CCYL1_XENTR Cyclin-Y-like protein 1 OS=Xenopus tropicalis GN=ccnyl1 PE=2 SV=1
Length = 343
Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/325 (62%), Positives = 252/325 (77%), Gaps = 11/325 (3%)
Query: 1 MGNKTSCCSY--STPTT--QRKVHSKSSRFEEYVPEGEESVG-NLQHISERE-PEDW--E 52
MGN +CC ++P R V + ++ V E G +LQHIS+RE P D+ E
Sbjct: 1 MGNTVTCCVSPDASPKAGRDRAVTERGEPYQAQVELQETDPGPHLQHISDREFPVDFHDE 60
Query: 53 TDPSLHPKAGTIFLERSKLEQLVRVYQYNKNFSHIAADNRPLKKSSSCSTIYLDDSTVSQ 112
+PS HP+A TIFL +S+ + VR + + + +H++ + KK SSCSTI+LDDSTVSQ
Sbjct: 61 PNPSDHPQASTIFLSKSQTD--VREKRKSNHINHVSP-GQLTKKYSSCSTIFLDDSTVSQ 117
Query: 113 PNLKNTVKCSALAIYYYIKNGNSYKYLEIFDEKLHPLTRDPVPEDYDRYPPEHRQIYKFI 172
PNL++T+KC LAIYY+IKN +S + LEIFDEKLHPLTR+ V +DY ++ P+H+ IY+F+
Sbjct: 118 PNLRSTIKCVTLAIYYHIKNRDSDRSLEIFDEKLHPLTREEVADDYCKHDPDHKHIYRFV 177
Query: 173 RTLFNAAQLTAECAIITLVYLERLLTYAEVDITPGNWKRIVLGAILLASKVWDDQAVWNV 232
RTLF+AAQLTAECAI+TLVYLERLLTYAE+DI P NWKRIVLGAILLASKVWDDQAVWNV
Sbjct: 178 RTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPSNWKRIVLGAILLASKVWDDQAVWNV 237
Query: 233 DYCQILKDISVEDMNELERQFLEMLQFNINVPSSVYAKYYFDLRSLAESNDLTFPAEPLS 292
DYCQILKDI+VEDMNE+ER FLE+LQFNINVP+SVYAKYYFDLRSLA+ N+L+F EPLS
Sbjct: 238 DYCQILKDITVEDMNEMERHFLELLQFNINVPASVYAKYYFDLRSLADDNNLSFLLEPLS 297
Query: 293 KERAQKLEAMSIVYAKYYFDLRSLA 317
KERAQKLEA+S + Y DL A
Sbjct: 298 KERAQKLEAISRLCEDKYKDLSKAA 322
>sp|Q8N7R7|CCYL1_HUMAN Cyclin-Y-like protein 1 OS=Homo sapiens GN=CCNYL1 PE=1 SV=2
Length = 359
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/331 (59%), Positives = 243/331 (73%), Gaps = 33/331 (9%)
Query: 1 MGNKTSCCSYSTPTTQRKVHSKSSRFEEYVPE-------------------------GEE 35
MGN +CC +P K+ ++ E Y GE
Sbjct: 1 MGNTLTCCV--SPNASPKLGRRAGSAELYCASDIYEAVSGDAVAVAPAVVEPAELDFGEG 58
Query: 36 SVGNLQHISERE-PEDW--ETDPSLHPKAGTIFLERSKLEQLVRVYQYNKNFSHIAADNR 92
+LQHIS+RE PED E++PS HP+A TIFL +S+ + VR + + + +H++ +
Sbjct: 59 EGHHLQHISDREMPEDLALESNPSDHPRASTIFLSKSQTD--VREKRKSNHLNHVSP-GQ 115
Query: 93 PLKKSSSCSTIYLDDSTVSQPNLKNTVKCSALAIYYYIKNGNSYKYLEIFDEKLHPLTRD 152
KK SSCSTI+LDDSTVSQPNL+ TVKC LAIYY+IKN ++ + L+IFDE+ HPLTR+
Sbjct: 116 LTKKYSSCSTIFLDDSTVSQPNLRTTVKCVTLAIYYHIKNRDANRSLDIFDERSHPLTRE 175
Query: 153 PVPEDYDRYPPEHRQIYKFIRTLFNAAQLTAECAIITLVYLERLLTYAEVDITPGNWKRI 212
VPE+Y ++ PEH+ IY+F+RTLF+AAQLTAECAI+TLVYLERLLTYAE+DI P NWKRI
Sbjct: 176 KVPEEYFKHDPEHKFIYRFVRTLFSAAQLTAECAIVTLVYLERLLTYAEIDICPTNWKRI 235
Query: 213 VLGAILLASKVWDDQAVWNVDYCQILKDISVEDMNELERQFLEMLQFNINVPSSVYAKYY 272
VLGAILLASKVWDDQAVWNVDYCQILKDI+VEDMNE+ER FLE+LQFNINVP+SVYAKYY
Sbjct: 236 VLGAILLASKVWDDQAVWNVDYCQILKDITVEDMNEMERHFLELLQFNINVPASVYAKYY 295
Query: 273 FDLRSLAESNDLTFPAEPLSKERAQKLEAMS 303
FDLRSLA+ N+L F PLSKERAQ LEA+S
Sbjct: 296 FDLRSLADDNNLNFLFAPLSKERAQNLEAIS 326
>sp|Q5U5D0|CCY1A_XENLA Cyclin-Y-like protein 1-A OS=Xenopus laevis GN=ccnyl1-a PE=2 SV=1
Length = 339
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/322 (60%), Positives = 242/322 (75%), Gaps = 9/322 (2%)
Query: 1 MGNKTSCCSY--STPTTQRKVHSKSSRFEEYVPEGEESVGNLQHISERE-PEDW--ETDP 55
MGN +CC S+P R S E Y +GE G++QH+S E P D E +P
Sbjct: 1 MGNTVTCCVSPDSSPKEGRDREVTESG-EPYQAQGEPQDGDVQHMSVWELPIDLSNERNP 59
Query: 56 SLHPKAGTIFLERSKLEQLVRVYQYNKNFSHIAADNRPLKKSSSCSTIYLDDSTVSQPNL 115
S + TIFL +S+ + VR + + + +HI+ + KK SSCSTI+LDDSTVSQPNL
Sbjct: 60 SDDAQTSTIFLCKSQTD--VREKRKSNHINHISP-GQLTKKYSSCSTIFLDDSTVSQPNL 116
Query: 116 KNTVKCSALAIYYYIKNGNSYKYLEIFDEKLHPLTRDPVPEDYDRYPPEHRQIYKFIRTL 175
++T+KC LAIYY+IKN +S + L+IFDEKLHP+TR+ V DY ++ P+H+ IY+F+RTL
Sbjct: 117 RSTIKCVTLAIYYHIKNRDSDRSLDIFDEKLHPITREEVAHDYCKHDPDHKHIYRFVRTL 176
Query: 176 FNAAQLTAECAIITLVYLERLLTYAEVDITPGNWKRIVLGAILLASKVWDDQAVWNVDYC 235
F+AAQLTAECAI+TLVYLERLLTYAE+DI P NWK+IVLGAILL+SKVWDDQAVWNVDYC
Sbjct: 177 FSAAQLTAECAIVTLVYLERLLTYAEIDICPSNWKQIVLGAILLSSKVWDDQAVWNVDYC 236
Query: 236 QILKDISVEDMNELERQFLEMLQFNINVPSSVYAKYYFDLRSLAESNDLTFPAEPLSKER 295
QI+KDI+VEDMNE+ER FLE+LQFNINV +SVYAKYYFDLRSLA+ N+L F EPLS ER
Sbjct: 237 QIMKDITVEDMNEMERHFLELLQFNINVTASVYAKYYFDLRSLADDNNLHFLLEPLSNER 296
Query: 296 AQKLEAMSIVYAKYYFDLRSLA 317
AQKLEA+S + Y DL A
Sbjct: 297 AQKLEAISRLCEDKYKDLSKAA 318
>sp|P34624|YOJ1_CAEEL Uncharacterized cyclin-like protein ZK353.1 OS=Caenorhabditis
elegans GN=ZK353.1 PE=1 SV=3
Length = 357
Score = 355 bits (912), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 181/329 (55%), Positives = 231/329 (70%), Gaps = 23/329 (6%)
Query: 1 MGNKTSCCSYSTPTTQRKVHSKSSRF-----------EEYVPEGEESVGNLQHISERE-P 48
MGN + C + + + K ++ ++ + P E S L HISERE
Sbjct: 1 MGNSSCCLRTRSSSGEDKSYNNDGQYIRTNQVEFQYVNQVFPRDETSTNFLPHISEREVT 60
Query: 49 EDWETDPSLHPKAGTIFLERSKLEQLVR-----VYQYNK---NFSHIAADNRPLKKSSSC 100
E +E DPS +P A F+ERSK E ++ Y + H R L+KSSSC
Sbjct: 61 EGYEEDPSTNPTARPTFMERSKSEMKLKDNRRSCYMLDALAAGGHHPGILPRSLRKSSSC 120
Query: 101 STIYLDDSTVSQPNLKNTVKCSALAIYYYI---KNGNSYKYLEIFDEKLHPLTRDPVPED 157
STIY+DDSTVSQP+LKNT+KC +LAIYY+I KN + +EIF+E+LHP+ RDP+P +
Sbjct: 121 STIYIDDSTVSQPHLKNTIKCISLAIYYHISNRKNRGHERLMEIFEERLHPIFRDPIPPE 180
Query: 158 YDRYPPEHRQIYKFIRTLFNAAQLTAECAIITLVYLERLLTYAEVDITPGNWKRIVLGAI 217
P+HR IY+F+R LF++AQLTAECAIITLVY+ERLL YAE+D+ P NW+R+VLG+I
Sbjct: 181 QMTRDPDHRNIYRFVRNLFSSAQLTAECAIITLVYIERLLNYAEMDLCPSNWRRVVLGSI 240
Query: 218 LLASKVWDDQAVWNVDYCQILKDISVEDMNELERQFLEMLQFNINVPSSVYAKYYFDLRS 277
+LASKVWDDQAVWNVDYCQIL+D +V+DMNELER+FLE L FNI VPSSVYAKYYFDLR+
Sbjct: 241 MLASKVWDDQAVWNVDYCQILRDTNVDDMNELERRFLECLDFNIEVPSSVYAKYYFDLRT 300
Query: 278 LAESNDLTFPAEPLSKERAQKLEAMSIVY 306
LA +NDL P +PL KERAQ+LEA+S V+
Sbjct: 301 LALANDLQLPIQPLYKERAQRLEALSRVF 329
>sp|Q4R871|CCYL2_MACFA Cyclin-Y-like protein 2 OS=Macaca fascicularis GN=CCNYL2 PE=2 SV=1
Length = 360
Score = 301 bits (770), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 153/269 (56%), Positives = 201/269 (74%), Gaps = 8/269 (2%)
Query: 39 NLQHISERE-PED--WETDPSLHPKAGTIFLERSKLE-QLVRVYQYNKNFSHIAADNRPL 94
++ HI ERE PED E++ S HPKA TIFL +S+ + Q R Y K+ S R
Sbjct: 63 HVHHICEREMPEDIPLESNSSDHPKASTIFLRKSQTDVQEKRKSNYTKHVS----TERFT 118
Query: 95 KKSSSCSTIYLDDSTVSQPNLKNTVKCSALAIYYYIKNGNSYKYLEIFDEKLHPLTRDPV 154
++ SSCSTI+LDDST SQP+L T+K LAIYY+IK ++ + L IFDE+LHPLTR+ V
Sbjct: 119 QQYSSCSTIFLDDSTASQPHLTMTLKSVTLAIYYHIKQRDADRSLGIFDERLHPLTREEV 178
Query: 155 PEDYDRYPPEHRQIYKFIRTLFNAAQLTAECAIITLVYLERLLTYAEVDITPGNWKRIVL 214
E+Y +Y PEH+ I++F+RTLF A +LTAE AI++L+Y+ERL++YA++DI P NWKRIVL
Sbjct: 179 LEEYFKYDPEHKFIFRFVRTLFKAIRLTAEFAIVSLIYIERLVSYADIDICPTNWKRIVL 238
Query: 215 GAILLASKVWDDQAVWNVDYCQILKDISVEDMNELERQFLEMLQFNINVPSSVYAKYYFD 274
GAILLASKVW D AVWN DYC++ ++I+VE+MNELERQFL+++ +NI V SVY+++YFD
Sbjct: 239 GAILLASKVWSDMAVWNEDYCKLFENITVEEMNELERQFLKLINYNIGVTGSVYSRFYFD 298
Query: 275 LRSLAESNDLTFPAEPLSKERAQKLEAMS 303
LRSLA N L P L +ERA KLEA S
Sbjct: 299 LRSLAHDNGLYSPVYLLDRERAWKLEAFS 327
>sp|Q5T2Q4|CCYL2_HUMAN Cyclin-Y-like protein 2 OS=Homo sapiens GN=CCNYL2 PE=2 SV=2
Length = 361
Score = 275 bits (702), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 146/277 (52%), Positives = 198/277 (71%), Gaps = 23/277 (8%)
Query: 39 NLQHISERE-PED--WETDPSLHPKAGTIFLERS-------KLEQLVRVYQYNKNFSHIA 88
++ HI ERE PED E +PS HPKA TIFL +S K +QL +V ++F+
Sbjct: 63 HMHHICEREMPEDIPLEPNPSDHPKASTIFLRKSQTDVQEKKKKQLCKVS--TEHFT--- 117
Query: 89 ADNRPLKKSSSCSTIYLDDSTVSQPNLKNTVK-CSALAIYYYIKNGNSYKYLEIFDEKLH 147
++ SSCSTI+LDDS SQP+L T+K C I Y ++++ L IFDE+LH
Sbjct: 118 ------QQYSSCSTIFLDDSIASQPHLTMTLKSCDLGTILSYQAKRDAHRSLGIFDEQLH 171
Query: 148 PLT-RDPVPEDYDRYPPEHRQIYKFIRTLFNAAQLTAECAIITLVYLERLLTYAEVDITP 206
PLT R V E+Y +Y PEH+ I++F+RTLF A +LTAE AI++L+Y+ERL++YA++DI P
Sbjct: 172 PLTVRKEVLEEYFKYDPEHKLIFRFVRTLFKAMRLTAEFAIVSLIYIERLVSYADIDICP 231
Query: 207 GNWKRIVLGAILLASKVWDDQAVWNVDYCQILKDISVEDMNELERQFLEMLQFNINVPSS 266
NWKRIVLGAILLASKVW D AVWN DYC++ K+I+VE+MNELERQFL+++ +N ++ +S
Sbjct: 232 TNWKRIVLGAILLASKVWSDMAVWNEDYCKLFKNITVEEMNELERQFLKLINYNNSITNS 291
Query: 267 VYAKYYFDLRSLAESNDLTFPAEPLSKERAQKLEAMS 303
VY+++YFDLR+LA +N L P L +ERA KLEA S
Sbjct: 292 VYSRFYFDLRTLAHNNGLYSPVYLLDRERAWKLEAFS 328
>sp|P0C7X3|CCYL3_HUMAN Putative cyclin-Y-like protein 3 OS=Homo sapiens GN=CCNYL3 PE=2
SV=1
Length = 344
Score = 196 bits (498), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/207 (47%), Positives = 143/207 (69%), Gaps = 12/207 (5%)
Query: 95 KKSSSCSTIYLDDSTVSQPNLKNTVKCSALAIYYYIKNGNSYKYLEIFDEKLHPLTRDPV 154
+K SCSTI LD+ST SQP+L++T++ + N + L IF+E +HPL ++ +
Sbjct: 15 RKYGSCSTILLDNSTASQPDLRHTLE----------RYAN--RSLAIFEEPVHPLPQEKL 62
Query: 155 PEDYDRYPPEHRQIYKFIRTLFNAAQLTAECAIITLVYLERLLTYAEVDITPGNWKRIVL 214
P ++ P+ I++ TLF +LTA CAI+ LVY++RLLT A +D+ P NWK+IVL
Sbjct: 63 PGKSFKHDPKRNCIFRHFCTLFQVIKLTAPCAIVALVYIKRLLTSANIDLCPTNWKKIVL 122
Query: 215 GAILLASKVWDDQAVWNVDYCQILKDISVEDMNELERQFLEMLQFNINVPSSVYAKYYFD 274
G +LLASKVW + +W+VD Q KD +VE+M+++E+ FLE+L+FNI+V +SVYAKYYFD
Sbjct: 123 GTMLLASKVWRNHGLWSVDDSQNSKDTAVENMSKMEKCFLELLEFNIHVSASVYAKYYFD 182
Query: 275 LRSLAESNDLTFPAEPLSKERAQKLEA 301
L +LA +DL F L K++AQKLE
Sbjct: 183 LCALANDHDLYFLFSFLHKDKAQKLEG 209
>sp|A8MT82|CTLFB_HUMAN Putative centaurin-gamma-like family member 11P OS=Homo sapiens
GN=CTGLF11P PE=5 SV=2
Length = 671
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
Query: 39 NLQHISERE-PEDWETDPSLHPKAGTIFLERSKLEQLVRVYQYNKNFSHIAADNRPLKKS 97
++ H+ +RE PE E +PS +P+A TIF +R+ +V + + N +H++ + R ++
Sbjct: 63 HMHHVRDREMPEALEFNPSANPEASTIF-QRNSQTDVVEIRRSNCT-NHVSTE-RFSQQY 119
Query: 98 SSCSTIYLDDSTVSQPNLKNTVKCSALAIYYYIKNGNSYKYLEIFDEKL 146
SSCSTI+LDDST SQ L T+ L I ++I ++ + L I DE+L
Sbjct: 120 SSCSTIFLDDSTASQHYLTMTIISVTLEIPHHITQRDADRSLSIPDEQL 168
>sp|Q5VW22|AGAP6_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 6
OS=Homo sapiens GN=AGAP6 PE=2 SV=1
Length = 663
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 66/110 (60%), Gaps = 4/110 (3%)
Query: 39 NLQHISERE-PEDWETDPSLHPKAGTIFLERSKLEQLVRVYQYNKNFSHIAADNRPLKKS 97
++ H+ +RE PE E +PS +P+A TIF +R+ +V + + N +H++A R ++
Sbjct: 63 HMHHVRDREMPEALEFNPSANPEASTIF-QRNSQTDVVEIRRSNCT-NHVSA-VRFSQQY 119
Query: 98 SSCSTIYLDDSTVSQPNLKNTVKCSALAIYYYIKNGNSYKYLEIFDEKLH 147
S CSTI+LDDST Q L T+ L I ++I ++ + L I DE+LH
Sbjct: 120 SLCSTIFLDDSTAIQHYLTMTIISVTLEIPHHITQRDADRTLSIPDEQLH 169
>sp|Q96P64|AGAP4_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 4
OS=Homo sapiens GN=AGAP4 PE=2 SV=2
Length = 663
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 65/110 (59%), Gaps = 4/110 (3%)
Query: 39 NLQHISERE-PEDWETDPSLHPKAGTIFLERSKLEQLVRVYQYNKNFSHIAADNRPLKKS 97
++ H+ +RE PE E +PS +P+A TIF +R+ +V + + N +H++ R ++
Sbjct: 63 HMHHVRDREMPEALEFNPSANPEASTIF-QRNSQTDVVEIRRSNCT-NHVST-VRFSQQY 119
Query: 98 SSCSTIYLDDSTVSQPNLKNTVKCSALAIYYYIKNGNSYKYLEIFDEKLH 147
S CSTI+LDDST Q L T+ L I ++I ++ + L I DE+LH
Sbjct: 120 SLCSTIFLDDSTAIQHYLTMTIISVTLEIPHHITQRDADRSLSIPDEQLH 169
>sp|Q5SRD3|AGAP8_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 8
OS=Homo sapiens GN=AGAP8 PE=2 SV=1
Length = 663
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 65/110 (59%), Gaps = 4/110 (3%)
Query: 39 NLQHISERE-PEDWETDPSLHPKAGTIFLERSKLEQLVRVYQYNKNFSHIAADNRPLKKS 97
++ H+ +RE PE E +PS +P+A TIF +R+ +V + + N +H++ R ++
Sbjct: 63 HMHHVRDREMPEALEFNPSANPEASTIF-QRNSQTDVVEIRRSNCT-NHVST-VRFSQQY 119
Query: 98 SSCSTIYLDDSTVSQPNLKNTVKCSALAIYYYIKNGNSYKYLEIFDEKLH 147
S CSTI+LDDST Q L T+ L I ++I ++ + L I DE+LH
Sbjct: 120 SLCSTIFLDDSTAIQHYLTMTIISVTLEIPHHITQRDADRSLSIPDEQLH 169
>sp|Q5VUJ5|AGAP7_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 7
OS=Homo sapiens GN=AGAP7 PE=2 SV=1
Length = 663
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 4/110 (3%)
Query: 39 NLQHISERE-PEDWETDPSLHPKAGTIFLERSKLEQLVRVYQYNKNFSHIAADNRPLKKS 97
++ H+ +RE PE E +PS +P+A TIF +R+ +V + + N +H++ + ++
Sbjct: 63 HMHHVRDREMPEALEFNPSANPEASTIF-QRNSQTDVVEIRRSNCT-NHVSTVHFS-QQY 119
Query: 98 SSCSTIYLDDSTVSQPNLKNTVKCSALAIYYYIKNGNSYKYLEIFDEKLH 147
S CSTI+LDDST Q L T+ L I ++I ++ + L I DE+LH
Sbjct: 120 SLCSTIFLDDSTAIQHYLTMTIISVTLEIPHHITQRDADRSLSIPDEQLH 169
>sp|A6NIR3|AGAP5_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 5
OS=Homo sapiens GN=AGAP5 PE=2 SV=2
Length = 686
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 52 ETDPSLHPKAGTIFLERSKLEQLVRVYQYNKNFSHIAADNRPLKKSSSCSTIYLDDSTVS 111
E +PS +P+A TIF +R+ +V + + N +H++ + R ++ SSCSTI+LDDST S
Sbjct: 100 EFNPSANPEASTIF-QRNSQTDVVEIRRSNCT-NHVSTE-RFSQQYSSCSTIFLDDSTAS 156
Query: 112 QPNLKNTVKCSALAIYYYIKNGNSYKYLEIFDEKLH 147
Q L T+ L I ++I ++ + L I DE+LH
Sbjct: 157 QHYLTMTIISVTLEIPHHITQRDADRSLSIPDEQLH 192
>sp|Q9LY16|CCU42_ARATH Cyclin-U4-2 OS=Arabidopsis thaliana GN=CYCU4-2 PE=1 SV=1
Length = 216
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 168 IYKFIRTLFNAAQLTAECAIITLVYLERLLTYAEV-DITPGNWKRIVLGAILLASKVWDD 226
I ++ +F A + C I+ +YL+R + + I N R+++ ++L+++K DD
Sbjct: 64 IRSYMERIFKYADCSDSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDD 123
Query: 227 QAVWNVDYCQILKDISVEDMNELERQFLEMLQFNINVPSSVYAKY 271
N Y ++ I+ E+MN LE FL + F +NV S Y Y
Sbjct: 124 LCYNNAFYAKV-GGITTEEMNLLELDFLFGIGFQLNVTISTYNDY 167
>sp|Q8LB60|CCU31_ARATH Cyclin-U3-1 OS=Arabidopsis thaliana GN=CYCU3-1 PE=1 SV=2
Length = 221
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
Query: 143 DEKLHPLTRDPVPEDYDRYPPEHRQIYKFIRTLFNAAQLTAECAIITLVYLERLLTYAEV 202
D+K+ + D V R PPE I ++ +F + + C +I +Y++ L
Sbjct: 51 DDKILLGSPDSVTVFDGRSPPE-ISIAHYLDRIFKYSCCSPSCFVIAHIYIDHFLHKTRA 109
Query: 203 DITPGNWKRIVLGAILLASKVWDDQAVWNVDYCQILKDISVEDMNELERQFLEMLQFNIN 262
+ P N R+++ ++LA+KV+DD+ N Y ++ ++ ++N LE + L L F +
Sbjct: 110 LLKPLNVHRLIITTVMLAAKVFDDRYFNNAYYARV-GGVTTRELNRLEMELLFTLDFKLQ 168
Query: 263 VPSSVYAKY 271
V + +
Sbjct: 169 VDPQTFHTH 177
>sp|Q9FKF6|CCU43_ARATH Cyclin-U4-3 OS=Arabidopsis thaliana GN=CYCU4-3 PE=1 SV=1
Length = 219
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 149 LTRDPVPEDYDRYPPEHRQIYKFIRTLFNAAQLTAECAIITLVYLERLLTYAE-VDITPG 207
L++ P + I ++ +F A + C I+ +YL+R + + I
Sbjct: 43 LSQKQKPSSFTGVTKPSISIRSYLERIFEYANCSYSCYIVAYIYLDRFVKKQPFLPINSF 102
Query: 208 NWKRIVLGAILLASKVWDDQAVWNVDYCQILKDISVEDMNELERQFLEMLQFNINVPSSV 267
N R+++ ++L+++K DD + +N +Y + IS E+MN LE FL + F +NV S
Sbjct: 103 NVHRLIITSVLVSAKFMDDLS-YNNEYYAKVGGISREEMNMLELDFLFGIGFELNVTVST 161
Query: 268 YAKY 271
+ Y
Sbjct: 162 FNNY 165
>sp|Q7FAT5|CCP21_ORYSJ Cyclin-P2-1 OS=Oryza sativa subsp. japonica GN=CYCP2-1 PE=2 SV=1
Length = 217
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 168 IYKFIRTLFNAAQLTAECAIITLVYLERLLTYAEVDITPGNWKRIVLGAILLASKVWDDQ 227
++ F+ A ++ + ++ YL+RL V + N +R++ AIL+ASK +D+
Sbjct: 72 LHAFLERFSRYANVSPQVYVVAYAYLDRLRRGDGVRVVSANAQRLLTTAILVASKFVEDR 131
Query: 228 AVWNVDYCQILKDISVEDMNELERQFLEMLQFNINVPSSVYAKY 271
N Y + ++ +++ LE FL ++QF +NV SV+ Y
Sbjct: 132 NYKN-SYFAAVGGLTAAELSSLELDFLFLMQFRLNVSVSVFQSY 174
>sp|Q5T2P9|AGA10_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 10
OS=Homo sapiens GN=AGAP10 PE=2 SV=3
Length = 658
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 52 ETDPSLHPKAGTIFLERSKLEQLVRVYQYNKNFSHIAADNRPLKKSSSCSTIYLDDSTVS 111
E + S +P+A TIF +R+ +V + + N +H++ + R ++ SSCSTI+LDDST
Sbjct: 100 EFNSSANPEASTIF-QRNSQTDVVEIRRSNCT-NHVSTE-RFSQQYSSCSTIFLDDSTAI 156
Query: 112 QPNLKNTVKCSALAIYYYIKNGNSYKYLEIFDEKLH 147
Q L T+ L I ++I ++ + L I DE+LH
Sbjct: 157 QHYLTMTIISVTLEIPHHITQRDADRSLSIPDEQLH 192
>sp|O80513|CCU41_ARATH Cyclin-U4-1 OS=Arabidopsis thaliana GN=CYCU4-1 PE=1 SV=1
Length = 202
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 168 IYKFIRTLFNAAQLTAECAIITLVYLERLLTYAE--VDITPGNWKRIVLGAILLASKVWD 225
I ++ +F A + C ++ VYL+R T+ + + I N R+++ ++++A+K D
Sbjct: 54 IQSYLERIFKYANCSPSCFVVAYVYLDRF-THRQPSLPINSFNVHRLLITSVMVAAKFLD 112
Query: 226 DQAVWNVDYCQILKDISVEDMNELERQFLEMLQFNINVPSSVYAKYY 272
D N Y ++ IS ++MN LE FL L F +NV + + Y+
Sbjct: 113 DLYYNNAYYAKV-GGISTKEMNFLELDFLFGLGFELNVTPNTFNAYF 158
>sp|Q75HV0|CCP31_ORYSJ Cyclin-P3-1 OS=Oryza sativa subsp. japonica GN=CYCP3-1 PE=3 SV=1
Length = 236
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 175 LFNAAQLTAECAIITLVYLERLLTYAEVDITPGNWKRIVLGAILLASKVWDDQAVWNVDY 234
+F ++ + C ++ L+Y+ER L V +T + R+++ ++++A+K DD N Y
Sbjct: 86 IFKYSECSPSCFVLALIYMERYLQQPHVYMTSLSVHRLLITSVVVAAKFTDDAFFNNAFY 145
Query: 235 CQILKDISVEDMNELERQFLEMLQFNINVPSSVYAKYYFDL 275
++ IS +MN LE L L F + V + Y L
Sbjct: 146 ARV-GGISTVEMNRLELDLLFNLDFRLKVDLETFGSYCLQL 185
>sp|Q7XC35|CCP41_ORYSJ Cyclin-P4-1 OS=Oryza sativa subsp. japonica GN=CYCP4-1 PE=2 SV=1
Length = 212
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Query: 168 IYKFIRTLFNAAQLTAECAIITLVYLERLLTY-AEVDITPGNWKRIVLGAILLASKVWDD 226
I ++ +F A + C ++ +YL+R L + + N R+++ ++L A K DD
Sbjct: 57 IGGYLERIFRFANCSPSCYVVAYIYLDRFLRRRPALAVDSFNVHRLLITSVLTAVKFVDD 116
Query: 227 QAVWNVDYCQILKDISVEDMNELERQFLEMLQFNINVPSSVYAKYYFDLRS 277
+N Y + IS+ +MN LE FL + F++NV + +A Y L+S
Sbjct: 117 -ICYNNAYFARVGGISLMEMNYLEVDFLFGIAFDLNVTPAAFASYCAVLQS 166
>sp|Q9M205|CCU22_ARATH Cyclin-U2-2 OS=Arabidopsis thaliana GN=CYCU2-2 PE=1 SV=1
Length = 230
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 168 IYKFIRTLFNAAQLTAECAIITLVYLERLL-TYAEVDITPGNWKRIVLGAILLASKVWDD 226
I ++ +F + ++ VY++R T I+ N R+++ I++ASK +D
Sbjct: 77 IQSYLGRIFRYTKAGPSVYVVAYVYIDRFCQTNPGFRISLTNVHRLLITTIMIASKYVED 136
Query: 227 QAVWNVDYCQILKDISVEDMNELERQFLEMLQFNINVPSSVYAKY 271
N + ++ + ED+N+LE +FL ++ F ++V SV+ Y
Sbjct: 137 LNYRNSYFAKV-GGLETEDLNKLELEFLFLMGFKLHVNVSVFESY 180
>sp|Q9SHD3|CCU21_ARATH Cyclin-U2-1 OS=Arabidopsis thaliana GN=CYCU2-1 PE=1 SV=1
Length = 222
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 168 IYKFIRTLFNAAQLTAECAIITLVYLERLLTYAE-VDITPGNWKRIVLGAILLASKVWDD 226
I ++ +F + ++ VY++R + I+ N R+++ I++ASK +D
Sbjct: 71 IQSYLERIFRYTKAGPSVYVVAYVYIDRFCQNNQGFRISLTNVHRLLITTIMIASKYVED 130
Query: 227 QAVWNVDYCQILKDISVEDMNELERQFLEMLQFNINVPSSVYAKY 271
N + ++ + ED+N LE +FL ++ F ++V SV+ Y
Sbjct: 131 MNYKNSYFAKV-GGLETEDLNNLELEFLFLMGFKLHVNVSVFESY 174
>sp|P24867|PCL1_YEAST PHO85 cyclin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PCL1 PE=1 SV=1
Length = 279
Score = 40.8 bits (94), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 101/232 (43%), Gaps = 32/232 (13%)
Query: 153 PVPEDYDRYPPEHRQIYKFIR--TLFNAAQLTAECAIITLVYLERLLTYAEVDIT--PGN 208
P + R P I + +R ++ LTA C YL +L D T P
Sbjct: 44 PGEKHLTRLPSLMTFITRLVRYTNVYTPTLLTAAC------YLNKLKRILPRDATGLPST 97
Query: 209 WKRIVLGAILLASKVWDDQAVWNVDYCQILKDI-SVEDMNELERQFLEMLQFNINVPSSV 267
RI L ++L++K +D + N + + + ++ED+N +ERQ L++L +++ V +
Sbjct: 98 IHRIFLACLILSAKFHNDSSPLNKHWARYTDGLFTLEDINLMERQLLQLLNWDLRVNTE- 156
Query: 268 YAKYYFDLRSLAESNDLTFPAEPLSKERAQKLEAM--------SIVYAKYYFDL----RS 315
DL+ L E ++R + +M S + + F L R+
Sbjct: 157 --DLILDLQPLLEPIKQDLARSSDQRKRINMMMSMNRRTCAGTSPIRSNNRFKLYEKQRN 214
Query: 316 LAESNDLTFPAEPLSKERAQKLEAMSRIMEDKMLRNN----IKKWSSLDNVN 363
++ ++DL+ S ++L+ ++ I + + N ++KW+ DNVN
Sbjct: 215 VSIASDLSSATLVDSCNDLRRLKDVTNIANNTVANTNYVRTVEKWN--DNVN 264
>sp|Q9LJ45|CCU11_ARATH Cyclin-U1-1 OS=Arabidopsis thaliana GN=CYCU1-1 PE=1 SV=1
Length = 210
Score = 39.3 bits (90), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 168 IYKFIRTLFNAAQLTAECAIITLVYLERLL-TYAEVDITPGNWKRIVLGAILLASKVWDD 226
I K++ ++ + + C ++ VY++RL + + N R+++ +++A+K+ DD
Sbjct: 69 IAKYLERIYKYTKCSPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDD 128
Query: 227 QAVWNVDYCQILKDISVEDMNELERQFLEMLQFNINVPSSVYAKYYFDLRSLAESND 283
N Y ++ +S D+N++E + L +L F + V V+ Y F L + ND
Sbjct: 129 VHYNNEFYARV-GGVSNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQLND 184
>sp|Q06712|PREG_NEUCR Nuc-1 negative regulatory protein preg OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=preg PE=1 SV=1
Length = 483
Score = 36.6 bits (83), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 168 IYKFIRTLFNAAQLTAECAIITLVYLERLLT-YAEVDITPGNWKRIVLGAILLASKVWDD 226
+ ++ L A L+ + + Y++RL Y++ I R ++ A +A+K D
Sbjct: 316 VLDYLHRLAKHAYLSPPILLSMVYYIDRLCALYSDFTINTLTVHRFLITAATVAAKGLSD 375
Query: 227 QAVWNVDYCQILKDISVEDMNELERQFLEMLQFNINVPSSVYAKYYFDL 275
+ N Y ++ + V ++N LE +FL + + I V YY L
Sbjct: 376 SFLTNTLYARV-GGVRVAELNMLELEFLHRVDWKIVPDPDVLVAYYGGL 423
>sp|Q659K0|CCNB3_CANFA G2/mitotic-specific cyclin-B3 OS=Canis familiaris GN=CCNB3 PE=2 SV=1
Length = 1330
Score = 36.2 bits (82), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 12/148 (8%)
Query: 179 AQLTAECAIITLVYLERLLTYAEVDITPGNWKRIVLG--AILLASKVWDDQAVWNVDYCQ 236
Q+T E + TL +L+ + +++ K +LG A L+A+K + D+
Sbjct: 1114 VQMTFEMSHETLYLAVKLVDHYLMEVICKRDKLQLLGSTAFLIAAKFEEPCPPCVDDFLY 1173
Query: 237 ILKDI-SVEDMNELERQFLEMLQFNINVPSSV-----YAK-YYFDLRSLAESN---DLTF 286
I DI +M +E L+ L+F+IN+P + YA+ + +++L S ++T
Sbjct: 1174 ICDDIYQRHEMLSMEISILQTLKFDINIPIAYHFLRRYARCLHASMKTLTLSRFICEMTL 1233
Query: 287 PAEPLSKERAQKLEAMSIVYAKYYFDLR 314
+ERA KL A S + A Y LR
Sbjct: 1234 QEYDYVQERASKLAAGSFLLALYMMKLR 1261
>sp|P40186|PCL7_YEAST PHO85 cyclin-7 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PCL7 PE=1 SV=3
Length = 285
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 207 GNWKRIVLGAILLASKVWDDQAVWNVDYCQILKDISVEDMNELERQFLEMLQFNINVPSS 266
GN R+++ + + +K D N Y ++ IS++++N LE QFL + F + V
Sbjct: 211 GNIHRLLITGVTICTKFLSDFFYSNSRYAKV-GGISLQELNHLELQFLILCDFKLLVSVE 269
Query: 267 VYAKY 271
KY
Sbjct: 270 EMQKY 274
>sp|P05465|DHGA_ACICA Quinoprotein glucose dehydrogenase A OS=Acinetobacter calcoaceticus
GN=gdhA PE=3 SV=1
Length = 801
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 53/148 (35%), Gaps = 32/148 (21%)
Query: 54 DPSLHPKAGTIFLERSKLEQLVRVYQYNKNFSHI----------AADNRPLKKSSSCSTI 103
DP+ P GT F+ S Y + ++ D LK+ + S +
Sbjct: 390 DPNAMPGEGTTFVHNSPNAWAPLAYDAKLDIVYVPTGVGTPDIWGGDRTELKERYANSML 449
Query: 104 YLDDSTV-------------------SQPNL---KNTVKCSALAIYYYIKNGNSYKYLEI 141
++ ST SQP+L KN + AIY K GN++
Sbjct: 450 AINASTGKLVWNFQTTHHDLWDMDVPSQPSLADIKNKAGQTVPAIYVLTKTGNAFVLDRR 509
Query: 142 FDEKLHPLTRDPVPEDYDRYPPEHRQIY 169
+ + P+T PVP+ R P + Y
Sbjct: 510 NGQPIVPVTEKPVPQTVKRGPQTKGEFY 537
>sp|Q9SA32|CCB31_ARATH Putative cyclin-B3-1 OS=Arabidopsis thaliana GN=CYCB3-1 PE=2 SV=2
Length = 396
Score = 32.7 bits (73), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 181 LTAECAIITLVYLERLLTYAEVDITPGNWKRIVLGAILLASKVWDDQAVWNVDYCQI-LK 239
L E +T+ L+R L ++V I + I L A+LLASK D D I +
Sbjct: 192 LMHETLYLTMDLLDRYL--SQVPIHKNEMQLIGLTALLLASKYEDYWHPRIKDLISISAE 249
Query: 240 DISVEDMNELERQFLEMLQFNINVPSSVYAKYYFDLRSL--AESN 282
+ E + +ER L+ L+F +N P+ Y F LR L A+SN
Sbjct: 250 SYTREQILGMERSMLKQLKFRLNAPTP----YVFMLRFLKAAQSN 290
>sp|P11365|GAG_IPMA Retrovirus-related Gag polyprotein OS=Mouse intracisternal
a-particle MIA14 GN=gag PE=4 SV=2
Length = 827
Score = 32.0 bits (71), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 169 YKFIRTLFNAAQLTAECAIITLVYLERLLTYAEVDITPGNWKRIVLGAILLASKVWDDQA 228
Y I+ L + + A TLV L+RL A + +TP +W+ +V A+ + K + +A
Sbjct: 234 YLQIKELAESVRKYGTNANFTLVQLDRL---AGMALTPADWQTVVKAALPMMGKYMEWRA 290
Query: 229 VWN 231
+W+
Sbjct: 291 LWH 293
>sp|Q5QMN4|RDR4_ORYSJ Probable RNA-dependent RNA polymerase 4 OS=Oryza sativa subsp.
japonica GN=RDR4 PE=2 SV=2
Length = 1183
Score = 31.6 bits (70), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 150 TRDPVPEDYDRYPPEHRQIYKFIRTLFNAAQLTAECAIITLVYLERLLT 198
T+ PED++ E ++F++T F + A A LVY++RLLT
Sbjct: 910 TKQKGPEDFNESELERVLFHEFLKTRFAPSYARATAATNWLVYMDRLLT 958
>sp|Q8Y4B9|ATPD_LISMO ATP synthase subunit delta OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=atpH PE=3 SV=1
Length = 179
Score = 31.6 bits (70), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 26/146 (17%)
Query: 228 AVWNVDYCQILKDISVEDMNELE------RQFLEMLQ---FNI----NVPSSVYAKYYFD 274
A++ V + L D+ E++ EL+ + F+++L+ F N+ S+V+ K
Sbjct: 14 ALFQVAQDKDLVDVFSEELTELKAALKANKDFVKLLENPTFTTEQKKNLASAVFEKINPT 73
Query: 275 LRSLAESNDLTFPAEPLSKERAQKLEAMSIVYAKYYFDLRSLAESNDLTFPAEPLSKERA 334
LR F + + R L ++ VY K DLR +A+++ + PLS+
Sbjct: 74 LRD--------FIYLLIDRSREDYLSVIADVYQKRVNDLRGVADAD--VYSVVPLSE--- 120
Query: 335 QKLEAMSRIMEDKMLRNNIKKWSSLD 360
Q+L A+SR+ KM + + + +D
Sbjct: 121 QELTALSRVFATKMNKTKLNIQNHID 146
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,397,259
Number of Sequences: 539616
Number of extensions: 5720489
Number of successful extensions: 15706
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 15630
Number of HSP's gapped (non-prelim): 76
length of query: 377
length of database: 191,569,459
effective HSP length: 119
effective length of query: 258
effective length of database: 127,355,155
effective search space: 32857629990
effective search space used: 32857629990
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)