Query psy16567
Match_columns 127
No_of_seqs 123 out of 1146
Neff 7.4
Searched_HMMs 29240
Date Fri Aug 16 16:20:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16567.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16567hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sqr_A Laccase; multicopper ox 100.0 1.2E-34 4E-39 241.6 13.8 110 17-126 77-190 (580)
2 3t6v_A Laccase; beta barrel, o 100.0 1.9E-34 6.5E-39 236.6 14.5 110 16-125 13-131 (495)
3 3pxl_A Laccase; 4-copper prote 100.0 2.1E-34 7.3E-39 236.5 14.2 111 16-126 12-131 (499)
4 1aoz_A Ascorbate oxidase; oxid 100.0 2.7E-34 9.3E-39 237.7 14.3 110 16-125 12-125 (552)
5 1v10_A Laccase; multicopper bl 100.0 1E-33 3.5E-38 233.1 14.0 111 15-125 31-151 (521)
6 1zpu_A Iron transport multicop 100.0 1.3E-33 4.3E-38 233.3 13.8 110 16-125 11-126 (534)
7 2q9o_A Laccase-1; multicopper 100.0 9.6E-34 3.3E-38 235.0 12.9 108 19-126 47-160 (559)
8 1hfu_A Laccase 1; oxidoreducta 100.0 1E-32 3.5E-37 226.3 13.7 109 16-125 13-130 (503)
9 3g5w_A Multicopper oxidase typ 100.0 2.3E-32 8E-37 213.3 11.5 104 21-125 17-127 (318)
10 3gdc_A Multicopper oxidase; be 100.0 2.1E-31 7.2E-36 205.1 12.1 101 21-125 49-156 (288)
11 3zx1_A Oxidoreductase, putativ 100.0 3.8E-31 1.3E-35 216.5 13.4 100 21-126 65-174 (481)
12 2zwn_A Two-domain type laccase 100.0 3.9E-31 1.3E-35 207.6 11.7 104 21-125 18-128 (339)
13 2uxt_A Protein SUFI, SUFI; oxi 100.0 6.8E-31 2.3E-35 213.1 8.9 98 22-125 34-140 (451)
14 3abg_A Bilirubin oxidase; clea 100.0 2.3E-30 7.7E-35 214.0 9.4 105 16-126 47-160 (534)
15 3od3_A Blue copper oxidase CUE 100.0 5.6E-30 1.9E-34 209.9 10.9 104 16-125 26-138 (488)
16 2xu9_A Laccase; oxidoreductase 100.0 1.2E-29 4.1E-34 204.9 12.5 103 16-125 25-137 (439)
17 3t9w_A Small laccase, multi-co 100.0 7.3E-30 2.5E-34 197.7 9.8 97 26-126 46-165 (299)
18 2wsd_A Spore coat protein A; o 100.0 1.8E-29 6.1E-34 207.5 9.9 108 16-125 36-178 (513)
19 3gyr_A PHS, phenoxazinone synt 100.0 3.3E-29 1.1E-33 207.8 11.3 105 15-125 42-196 (612)
20 3kw8_A Laccase, putative coppe 100.0 2.4E-29 8.3E-34 192.6 9.2 101 22-126 20-143 (276)
21 3tas_A Small laccase, multi-co 100.0 7.3E-29 2.5E-33 193.0 9.5 103 20-126 23-149 (313)
22 3aw5_A Multicopper oxidase; be 100.0 5.1E-29 1.7E-33 202.1 7.9 95 26-126 25-129 (448)
23 2g23_A PHS, phenoxazinone synt 99.9 2.5E-27 8.4E-32 198.6 10.7 105 16-125 43-196 (612)
24 1kbv_A ANIA, major outer membr 99.9 2.2E-26 7.5E-31 179.8 11.6 101 18-125 49-158 (327)
25 1oe1_A Dissimilatory copper-co 99.9 3.5E-26 1.2E-30 178.6 11.3 102 16-124 43-153 (336)
26 1mzy_A Copper-containing nitri 99.9 6.1E-26 2.1E-30 177.2 11.0 98 21-124 47-153 (333)
27 2bw4_A Copper-containing nitri 99.9 6.5E-26 2.2E-30 177.4 10.9 102 18-125 51-160 (340)
28 1sdd_A Coagulation factor V; c 99.9 2.6E-26 8.9E-31 178.0 8.0 94 28-125 51-168 (306)
29 2zoo_A Probable nitrite reduct 99.9 1.4E-25 4.8E-30 180.7 12.1 98 21-125 43-148 (442)
30 2j5w_A Ceruloplasmin, ferroxid 99.9 7.4E-26 2.5E-30 198.9 9.8 108 18-126 60-204 (1065)
31 2r7e_A Coagulation factor VIII 99.9 3.2E-26 1.1E-30 195.2 1.3 97 23-125 63-183 (742)
32 3cg8_A Laccase; oxidoreductase 99.9 1.1E-24 3.8E-29 171.4 9.0 90 32-125 71-183 (343)
33 1sdd_B Coagulation factor V; c 99.9 6.3E-25 2.2E-29 184.4 6.6 90 33-125 64-177 (647)
34 2r7e_B Coagulation factor VIII 99.9 1.7E-24 5.7E-29 185.3 6.6 89 34-125 195-299 (770)
35 2r7e_A Coagulation factor VIII 99.9 4.7E-23 1.6E-27 175.8 4.3 90 34-125 448-558 (742)
36 2dv6_A Nitrite reductase; elec 99.9 2.5E-21 8.5E-26 155.8 11.2 97 22-125 179-283 (447)
37 3kw8_A Laccase, putative coppe 99.8 1.7E-18 5.7E-23 132.4 10.0 94 29-125 157-267 (276)
38 2j5w_A Ceruloplasmin, ferroxid 99.7 1.1E-18 3.6E-23 153.6 5.5 96 24-124 616-718 (1065)
39 2dv6_A Nitrite reductase; elec 99.7 5.2E-18 1.8E-22 136.4 8.2 85 28-125 46-134 (447)
40 3cvb_A Plastocyanin; cupredoxi 99.7 5.5E-18 1.9E-22 111.5 5.5 86 34-123 15-105 (105)
41 1iby_A Nitrosocyanin; RED copp 99.7 7.8E-16 2.7E-20 102.8 11.6 92 18-123 17-112 (112)
42 3cg8_A Laccase; oxidoreductase 99.7 2.5E-16 8.4E-21 123.8 9.9 94 29-125 198-308 (343)
43 1fwx_A Nitrous oxide reductase 99.6 4E-15 1.4E-19 124.3 13.0 93 22-125 497-594 (595)
44 3zx1_A Oxidoreductase, putativ 99.6 1E-14 3.5E-19 119.3 9.2 95 28-123 372-481 (481)
45 3tas_A Small laccase, multi-co 99.5 3.8E-14 1.3E-18 109.9 10.0 95 29-125 163-273 (313)
46 3t9w_A Small laccase, multi-co 99.5 6E-14 2E-18 108.3 10.0 96 28-125 178-289 (299)
47 1sdd_B Coagulation factor V; c 99.5 6.5E-14 2.2E-18 117.6 10.5 98 25-124 225-328 (647)
48 3gdc_A Multicopper oxidase; be 99.5 4.8E-14 1.6E-18 108.1 8.5 98 23-122 177-287 (288)
49 2cal_A Rusticyanin; iron respi 99.5 7.8E-14 2.7E-18 98.6 8.9 101 18-122 29-154 (154)
50 2g23_A PHS, phenoxazinone synt 99.5 9.6E-14 3.3E-18 116.4 8.9 97 26-123 458-591 (612)
51 3g5w_A Multicopper oxidase typ 99.5 1.1E-13 3.8E-18 107.6 8.1 88 26-115 164-258 (318)
52 2ov0_A Amicyanin; beta-sandwic 99.5 5.2E-13 1.8E-17 88.3 10.1 80 31-122 26-105 (105)
53 2xu9_A Laccase; oxidoreductase 99.4 3.4E-13 1.2E-17 108.7 10.0 86 28-115 335-428 (439)
54 3t6v_A Laccase; beta barrel, o 99.4 3.3E-13 1.1E-17 110.6 9.4 85 38-124 374-471 (495)
55 3pxl_A Laccase; 4-copper prote 99.4 3.3E-13 1.1E-17 110.7 9.3 87 37-125 369-472 (499)
56 1sdd_A Coagulation factor V; c 99.4 6E-15 2E-19 114.1 -1.2 94 26-124 201-301 (306)
57 1hfu_A Laccase 1; oxidoreducta 99.4 6E-13 2E-17 109.0 10.1 84 38-122 373-469 (503)
58 1v10_A Laccase; multicopper bl 99.4 4.3E-13 1.5E-17 110.3 8.9 81 38-122 397-490 (521)
59 1zpu_A Iron transport multicop 99.4 8.4E-13 2.9E-17 109.0 9.6 77 38-115 370-469 (534)
60 2aan_A Auracyanin A; cupredoxi 99.4 4E-12 1.4E-16 87.7 10.5 88 34-122 31-139 (139)
61 2zwn_A Two-domain type laccase 99.4 1.8E-12 6.3E-17 101.3 8.7 88 25-114 164-258 (339)
62 3abg_A Bilirubin oxidase; clea 99.3 1.1E-12 3.8E-17 108.3 6.1 96 28-123 360-475 (534)
63 1kbv_A ANIA, major outer membr 99.3 7E-12 2.4E-16 97.6 9.0 98 26-124 198-308 (327)
64 2gim_A Plastocyanin; beta shee 99.3 4.2E-12 1.4E-16 83.3 6.5 81 37-123 19-106 (106)
65 3od3_A Blue copper oxidase CUE 99.3 2.7E-12 9.2E-17 105.2 6.6 86 28-115 379-478 (488)
66 4hci_A Cupredoxin 1; structura 99.3 2.4E-11 8.1E-16 79.4 9.9 84 25-122 15-100 (100)
67 2wsd_A Spore coat protein A; o 99.3 4.1E-12 1.4E-16 104.2 7.2 96 28-124 385-511 (513)
68 3gyr_A PHS, phenoxazinone synt 99.3 1.1E-11 3.9E-16 102.5 9.5 99 25-124 457-592 (612)
69 1aoz_A Ascorbate oxidase; oxid 99.3 6.7E-12 2.3E-16 103.7 6.8 77 39-115 418-513 (552)
70 2q9o_A Laccase-1; multicopper 99.2 1.6E-11 5.4E-16 101.8 8.4 76 40-115 406-509 (559)
71 3aw5_A Multicopper oxidase; be 99.2 1.7E-11 5.9E-16 99.2 6.5 90 28-121 325-447 (448)
72 2zoo_A Probable nitrite reduct 99.2 1.2E-10 4E-15 93.6 9.5 99 25-124 187-298 (442)
73 2r7e_B Coagulation factor VIII 99.2 1.2E-11 4.1E-16 106.0 3.5 87 27-115 355-444 (770)
74 2bw4_A Copper-containing nitri 99.1 1.7E-10 5.8E-15 89.8 9.5 96 26-124 215-325 (340)
75 2uxt_A Protein SUFI, SUFI; oxi 99.1 3.8E-11 1.3E-15 97.1 5.8 90 28-123 334-441 (451)
76 2plt_A Plastocyanin; electron 99.1 1.1E-10 3.8E-15 75.4 6.1 76 37-122 17-98 (98)
77 3sqr_A Laccase; multicopper ox 99.1 8.7E-11 3E-15 98.0 7.0 81 43-124 444-544 (580)
78 1mzy_A Copper-containing nitri 99.1 2.4E-10 8.2E-15 88.8 9.0 96 25-124 208-319 (333)
79 1qhq_A Protein (auracyanin); e 99.1 1.5E-09 5E-14 74.7 11.8 88 34-122 29-139 (140)
80 1pcs_A Plastocyanin; electron 99.1 1.8E-10 6.3E-15 74.5 5.0 79 37-122 18-98 (98)
81 1bxv_A Plastocyanin; copper pr 99.0 1.2E-09 4.1E-14 69.4 8.3 73 36-122 17-91 (91)
82 3ef4_A Pseudoazurin, blue copp 99.0 2.2E-09 7.7E-14 73.3 8.5 75 37-125 21-97 (124)
83 1b3i_A PETE protein, protein ( 99.0 1.4E-09 4.9E-14 70.1 7.0 76 37-122 18-97 (97)
84 3erx_A Pseudoazurin; copper pr 99.0 2.1E-09 7.1E-14 73.3 7.8 73 37-123 20-94 (123)
85 3tu6_A Pseudoazurin (blue copp 99.0 1.7E-09 5.9E-14 74.1 6.9 75 37-125 22-98 (127)
86 1oe1_A Dissimilatory copper-co 98.9 3.1E-09 1.1E-13 82.5 9.0 96 25-124 208-319 (336)
87 1byp_A Protein (plastocyanin); 98.9 2.9E-09 1E-13 68.8 7.1 76 37-122 16-99 (99)
88 3sbq_A Nitrous-oxide reductase 98.9 1.4E-08 4.7E-13 84.7 12.6 97 14-123 532-637 (638)
89 1kdj_A Plastocyanin; electron 98.9 4.5E-09 1.6E-13 68.3 7.5 80 37-122 16-102 (102)
90 3c75_A Amicyanin; copper prote 98.9 1E-08 3.5E-13 70.3 9.4 79 32-122 54-132 (132)
91 1plc_A Plastocyanin; electron 98.9 4.9E-09 1.7E-13 67.8 7.0 76 37-122 16-99 (99)
92 1id2_A Amicyanin; beta barrel, 98.8 2.4E-08 8.2E-13 65.8 8.9 79 32-122 28-106 (106)
93 1cuo_A Protein (azurin ISO-2); 98.8 3.9E-08 1.3E-12 67.4 8.4 88 35-123 15-129 (129)
94 1iuz_A Plastocyanin; electron 98.8 7.7E-08 2.6E-12 62.2 9.5 76 37-122 17-98 (98)
95 1paz_A Pseudoazurin precursor; 98.7 6.6E-08 2.2E-12 65.7 8.4 74 37-124 20-95 (123)
96 3ay2_A Lipid modified azurin p 98.7 1.4E-07 4.8E-12 67.4 10.1 89 34-123 54-167 (167)
97 1pmy_A Pseudoazurin; electron 98.7 6.7E-08 2.3E-12 65.6 8.0 74 37-124 20-95 (123)
98 2ux6_A Pseudoazurin; type-1 co 98.7 5.4E-08 1.8E-12 66.0 7.1 73 37-123 20-92 (122)
99 2iaa_C Azurin; quinoprotein, t 98.5 1.5E-06 5.2E-11 59.4 9.6 89 34-123 13-128 (128)
100 2ccw_A Azurin II, AZN-2; elect 98.5 4.4E-07 1.5E-11 62.1 6.8 89 34-123 14-129 (129)
101 1nwp_A Azurin; electron transp 98.4 1.9E-06 6.4E-11 58.9 8.4 88 34-122 14-128 (128)
102 2cua_A Protein (CUA); CUA cent 98.1 5.8E-05 2E-09 51.8 11.1 72 37-123 59-135 (135)
103 3fsa_A Azurin; copper, cupredo 97.9 9E-05 3.1E-09 50.4 9.5 86 35-121 15-124 (125)
104 3s8f_B Cytochrome C oxidase su 97.8 0.00021 7.1E-09 50.9 10.2 82 27-123 82-168 (168)
105 1cyx_A CYOA; electron transpor 94.0 0.23 7.9E-06 36.2 7.4 58 38-110 41-98 (205)
106 2gsm_B Cytochrome C oxidase su 91.6 0.99 3.4E-05 33.8 8.1 59 38-111 171-229 (262)
107 3hb3_B Cytochrome C oxidase su 91.1 1.2 4.1E-05 34.1 8.3 59 38-111 189-247 (298)
108 3isy_A Bsupi, intracellular pr 87.3 4.7 0.00016 26.7 9.1 36 75-110 59-100 (120)
109 1v54_B Cytochrome C oxidase po 86.6 2.8 9.6E-05 30.7 7.2 59 38-111 140-198 (227)
110 4ac7_B Urease subunit beta; hy 84.8 2.7 9.4E-05 28.1 5.8 60 39-99 18-89 (126)
111 4ubp_B Protein (urease (chain 84.8 2.7 9.4E-05 28.1 5.8 60 39-99 18-89 (126)
112 1fft_B Ubiquinol oxidase; elec 78.5 3.2 0.00011 31.9 5.0 58 38-110 151-208 (315)
113 3rfr_A PMOB; membrane, oxidore 76.1 1.4 4.6E-05 35.2 2.3 46 75-120 100-147 (419)
114 4ep8_B Urease subunit beta; al 74.5 7.5 0.00026 25.0 5.1 60 39-99 12-83 (101)
115 1xwv_A DER F II; beta sheets, 74.2 11 0.00038 24.7 6.3 61 37-99 24-92 (129)
116 3rfr_A PMOB; membrane, oxidore 74.1 6.9 0.00024 31.2 5.8 15 86-100 353-367 (419)
117 2c34_A ICP, inhibitor of cyste 71.2 14 0.00047 24.0 6.0 67 37-104 14-88 (116)
118 2f1e_A Protein APAG; APAG prot 71.0 8.1 0.00028 25.7 4.9 50 48-99 33-88 (127)
119 1xvs_A Protein APAG; MCSG APC2 70.5 7.4 0.00025 25.9 4.6 50 48-99 32-87 (126)
120 1e9y_A Urease subunit alpha; h 65.6 23 0.0008 26.1 6.7 80 17-99 84-188 (238)
121 1nep_A EPV20, BNPC2, epididyma 65.3 21 0.0007 23.4 6.0 63 37-100 25-95 (130)
122 1tza_A APAG protein, SOR45; st 64.3 9.1 0.00031 25.8 4.1 50 48-99 32-87 (134)
123 1yew_A Particulate methane mon 62.5 2.4 8.2E-05 33.4 1.0 33 86-118 83-117 (382)
124 2wgn_B Inhibitor of cysteine p 61.3 33 0.0011 22.8 7.5 70 34-104 31-104 (132)
125 2cio_B Inhibitor of cysteine p 59.2 34 0.0012 22.2 8.2 65 37-104 12-92 (121)
126 3qga_A UREA2, fusion of urease 58.7 22 0.00075 26.0 5.5 81 16-99 83-188 (225)
127 2h7w_A Chagasin; beta-strands, 55.7 30 0.001 22.9 5.5 65 37-104 32-103 (131)
128 1xq4_A Protein APAG; all beta 54.9 29 0.001 23.4 5.4 50 48-99 37-92 (139)
129 4ajy_V VON hippel-lindau disea 53.2 20 0.0007 24.9 4.4 52 35-96 8-60 (163)
130 2wtp_A ORF131 protein, CZCE; m 52.4 7.6 0.00026 26.2 2.0 17 40-56 73-89 (131)
131 3idu_A Uncharacterized protein 51.7 41 0.0014 22.1 5.6 61 41-108 28-93 (127)
132 2wnv_C C1Q chain C, complement 47.5 15 0.0005 24.1 2.9 16 38-53 93-108 (131)
133 2yev_B Cytochrome C oxidase su 52.7 4.1 0.00014 31.3 0.0 58 38-110 141-198 (337)
134 1lm8_V VHL, VON hippel-lindau 46.0 36 0.0012 23.6 4.7 49 38-96 8-57 (160)
135 2wnv_A C1Q chain A, complement 45.9 16 0.00054 24.0 2.9 17 38-54 94-110 (134)
136 2wnv_B C1Q chain B, complement 45.1 17 0.00057 24.0 2.9 17 38-54 95-111 (136)
137 2lu7_A Obscurin-like protein 1 41.3 52 0.0018 19.1 5.5 15 39-53 5-19 (84)
138 2hj1_A Hypothetical protein; s 41.2 9.4 0.00032 24.2 1.1 24 27-50 59-82 (97)
139 2xzz_A Protein-glutamine gamma 41.1 48 0.0016 20.9 4.5 51 47-103 23-77 (102)
140 3m86_A Amoebiasin-2; cysteine 40.2 38 0.0013 21.6 4.0 66 36-105 14-84 (111)
141 1yew_A Particulate methane mon 36.7 39 0.0013 26.6 4.1 60 27-96 68-128 (382)
142 2e6j_A Hydin protein; PAPD, st 33.8 71 0.0024 19.4 4.5 57 47-106 29-87 (112)
143 1gr3_A Collagen X; extracellul 33.7 22 0.00074 24.3 2.0 18 37-54 119-136 (160)
144 1tnr_A Tumor necrosis factor b 31.6 37 0.0013 22.5 2.9 20 35-54 107-126 (144)
145 1o91_A Collagen alpha 1(VIII) 31.2 25 0.00085 24.4 2.0 17 38-54 138-154 (178)
146 3kmh_A D-lyxose isomerase; cup 30.2 1.2E+02 0.0042 22.3 5.7 51 38-95 129-184 (246)
147 3ugn_A Tumor necrosis factor l 29.8 16 0.00054 25.4 0.8 22 35-56 129-150 (167)
148 3rpf_C Molybdopterin convertin 29.4 22 0.00076 20.6 1.3 24 27-50 43-67 (74)
149 1s55_A Tumor necrosis factor l 27.6 13 0.00044 25.2 -0.0 20 35-54 115-134 (156)
150 4gy7_A Urease; JACK bean, hydr 26.6 75 0.0026 27.4 4.6 59 40-99 144-214 (840)
151 1rj8_A Ectodysplasin-A isoform 26.5 38 0.0013 23.1 2.3 19 37-55 122-140 (164)
152 2lx7_A GAS-7, growth arrest-sp 26.3 14 0.00049 21.0 0.0 26 26-51 7-32 (60)
153 4f3j_A Complement C1Q tumor ne 26.2 35 0.0012 22.6 2.0 17 38-54 94-110 (148)
154 2ys4_A Hydrocephalus-inducing 25.9 1E+02 0.0035 19.3 4.2 56 40-104 37-95 (122)
155 3mjj_A Predicted acetamidase/f 25.3 51 0.0017 25.1 3.0 26 29-55 14-39 (301)
156 3b9t_A Twin-arginine transloca 25.2 49 0.0017 26.9 3.0 29 24-53 80-109 (484)
157 1x9u_A Umecyanin; cupredoxin, 24.9 1.2E+02 0.004 19.4 4.4 72 40-123 28-105 (116)
158 2q5w_D Molybdopterin convertin 23.9 31 0.0011 19.9 1.3 23 28-50 48-70 (77)
159 2l0d_A Cell surface protein; s 23.3 1.5E+02 0.0052 18.9 5.1 62 42-110 15-83 (114)
160 1u5x_A Tumor necrosis factor l 23.0 45 0.0015 22.1 2.1 20 36-55 103-122 (140)
161 2q8o_A GITR ligand; TNF, dimer 22.8 35 0.0012 22.8 1.5 21 35-55 94-114 (136)
162 3u7z_A Putative metal binding 22.8 47 0.0016 21.1 2.0 29 26-54 66-99 (101)
163 4ety_A LAIR-1, mlair1, leukocy 22.3 1.5E+02 0.0053 18.6 6.2 65 33-108 5-81 (118)
164 4g9s_B Inhibitor of G-type lys 22.0 64 0.0022 20.2 2.6 17 39-55 31-47 (111)
165 2qsv_A Uncharacterized protein 21.4 2.1E+02 0.0072 19.9 5.8 48 46-100 21-68 (220)
166 3jqw_A COLH protein, collagena 21.3 1.7E+02 0.0059 18.8 6.9 57 40-107 43-99 (121)
167 1kxg_A B lymphocyte stimulator 21.2 39 0.0013 23.0 1.5 22 35-56 113-134 (152)
168 3jqo_A TRAF protein; helical o 20.6 56 0.0019 23.8 2.3 17 37-53 197-213 (227)
169 4g4f_A Tumor necrosis factor l 20.5 54 0.0018 21.8 2.0 22 35-56 85-106 (126)
170 1dm9_A Hypothetical 15.5 KD pr 20.1 38 0.0013 22.3 1.2 23 30-52 37-59 (133)
No 1
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=1.2e-34 Score=241.63 Aligned_cols=110 Identities=38% Similarity=0.689 Sum_probs=103.2
Q ss_pred eEeecCCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEE
Q psy16567 17 GCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYK 96 (127)
Q Consensus 17 ~~v~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~ 96 (127)
..+.+||.++.+|+|||++|||+|++++||+|+|+|+|+++.++++|||||+.+...+|+||++.++|++|.||++|+|+
T Consensus 77 ~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vTq~pI~PG~sftY~ 156 (580)
T 3sqr_A 77 STITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYK 156 (580)
T ss_dssp EEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTTBCCBCTTCEEEEE
T ss_pred EEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccccCCCCCCCeEEEE
Confidence 45778999999999999999999999999999999999997468999999999987789999999999999999999999
Q ss_pred EeCCCceeeEEccCCCCCc----eeeEEEEcCCC
Q psy16567 97 FPAMPSGTFFYHSHVDRRP----YCPEIEEKKKT 126 (127)
Q Consensus 97 ~~~~~~Gt~~yH~H~~~~~----~g~liV~d~~~ 126 (127)
|+++++||||||||...|+ +|+|||++|++
T Consensus 157 f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~ 190 (580)
T 3sqr_A 157 FQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPAT 190 (580)
T ss_dssp EECCCCEEEEEEECSTTGGGGTCEEEEEEECCCS
T ss_pred EECCCCcceEEeecccccccCcCEEEEEeeCccc
Confidence 9999999999999998886 99999998764
No 2
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=1.9e-34 Score=236.61 Aligned_cols=110 Identities=34% Similarity=0.671 Sum_probs=102.5
Q ss_pred ceEeecCCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCC----CceEEEEeeeeeecCCCCCCCcccceeeeCCCC
Q psy16567 16 KGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID----REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSST 91 (127)
Q Consensus 16 ~~~v~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~----~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~ 91 (127)
...+.+||.++.+|+|||++|||+|++++||+|+|+|+|.+++ .+++|||||+.++..+|+||++.++|++|.||+
T Consensus 13 ~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~ 92 (495)
T 3t6v_A 13 NADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQCPIIVGN 92 (495)
T ss_dssp EEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTC
T ss_pred EEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCC
Confidence 4568899999999999999999999999999999999999983 369999999999877899999999999999999
Q ss_pred EEEEEEeC-CCceeeEEccCCCCCc----eeeEEEEcCC
Q psy16567 92 TFRYKFPA-MPSGTFFYHSHVDRRP----YCPEIEEKKK 125 (127)
Q Consensus 92 ~~~y~~~~-~~~Gt~~yH~H~~~~~----~g~liV~d~~ 125 (127)
+|+|+|++ +++||||||||...|. +|+|||++|.
T Consensus 93 sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~ 131 (495)
T 3t6v_A 93 SFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPN 131 (495)
T ss_dssp EEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred eEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCcc
Confidence 99999999 7899999999998886 9999999875
No 3
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=2.1e-34 Score=236.53 Aligned_cols=111 Identities=32% Similarity=0.703 Sum_probs=102.8
Q ss_pred ceEeecCCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCC----CceEEEEeeeeeecCCCCCCCcccceeeeCCCC
Q psy16567 16 KGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID----REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSST 91 (127)
Q Consensus 16 ~~~v~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~----~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~ 91 (127)
...+.+||.++.+|+|||++|||+|++++||+|+|+|+|.+++ .+++|||||+.++..+|+||++.++|++|.||+
T Consensus 12 ~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~ 91 (499)
T 3pxl_A 12 DAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCPISPGH 91 (499)
T ss_dssp EEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTC
T ss_pred EEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCC
Confidence 4568899999999999999999999999999999999999983 369999999999877899999999999999999
Q ss_pred EEEEEEeC-CCceeeEEccCCCCCc----eeeEEEEcCCC
Q psy16567 92 TFRYKFPA-MPSGTFFYHSHVDRRP----YCPEIEEKKKT 126 (127)
Q Consensus 92 ~~~y~~~~-~~~Gt~~yH~H~~~~~----~g~liV~d~~~ 126 (127)
+|+|+|++ +++||||||||...|. +|+|||++|..
T Consensus 92 s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~ 131 (499)
T 3pxl_A 92 SFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPND 131 (499)
T ss_dssp EEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTC
T ss_pred eEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcc
Confidence 99999999 7899999999998886 99999998753
No 4
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=2.7e-34 Score=237.74 Aligned_cols=110 Identities=35% Similarity=0.728 Sum_probs=103.7
Q ss_pred ceEeecCCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEE
Q psy16567 16 KGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRY 95 (127)
Q Consensus 16 ~~~v~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y 95 (127)
...+.+||.++.+|+|||++|||+|++++||+|+|+|+|.++.++++|||||+++...+|+||++.++|++|.||++++|
T Consensus 12 ~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~tY 91 (552)
T 1aoz_A 12 YMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFY 91 (552)
T ss_dssp EEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEE
T ss_pred EEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccCCcCCCCeEEE
Confidence 45688999999999999999999999999999999999999647999999999998888999999999999999999999
Q ss_pred EEeCCCceeeEEccCCCCCc----eeeEEEEcCC
Q psy16567 96 KFPAMPSGTFFYHSHVDRRP----YCPEIEEKKK 125 (127)
Q Consensus 96 ~~~~~~~Gt~~yH~H~~~~~----~g~liV~d~~ 125 (127)
+|+++++||||||||...|. +|+|||++++
T Consensus 92 ~f~~~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~ 125 (552)
T 1aoz_A 92 NFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQ 125 (552)
T ss_dssp EEECCSCEEEEEEECSTTTGGGTCEEEEEEECCT
T ss_pred EEECCCCEEEEEEECchhHHhccCeeeEEEeCCc
Confidence 99999999999999998886 9999999874
No 5
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=1e-33 Score=233.11 Aligned_cols=111 Identities=29% Similarity=0.522 Sum_probs=102.9
Q ss_pred cceEeecCCc-eEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCC----CceEEEEeeeeeecCCCCCCCcccceeeeCC
Q psy16567 15 RKGCVTADGF-ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID----REVTLHWHGVYQKVTPWMDGVPMVTQCPIPS 89 (127)
Q Consensus 15 ~~~~v~~~G~-~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~----~~~siH~HG~~~~~~~~~DG~~~~~~~~i~P 89 (127)
+...+.+||. ++.+|+|||++|||+|++++||+|+|+|+|++++ .+++|||||+++...+|+||++.++|++|.|
T Consensus 31 ~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~P 110 (521)
T 1v10_A 31 LNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIP 110 (521)
T ss_dssp EEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBTTTBCCBCT
T ss_pred EEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCCcceeeCCcCC
Confidence 3456889999 9999999999999999999999999999999973 6899999999997777999999999999999
Q ss_pred CCEEEEEEe-CCCceeeEEccCCCCCc----eeeEEEEcCC
Q psy16567 90 STTFRYKFP-AMPSGTFFYHSHVDRRP----YCPEIEEKKK 125 (127)
Q Consensus 90 G~~~~y~~~-~~~~Gt~~yH~H~~~~~----~g~liV~d~~ 125 (127)
|++++|+|+ ++++||||||||...|. +|+|||++|+
T Consensus 111 G~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 151 (521)
T 1v10_A 111 NESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPN 151 (521)
T ss_dssp TEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred CCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCc
Confidence 999999999 58899999999998886 9999999875
No 6
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-33 Score=233.31 Aligned_cols=110 Identities=36% Similarity=0.623 Sum_probs=103.0
Q ss_pred ceEeecCC-ceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEE
Q psy16567 16 KGCVTADG-FERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFR 94 (127)
Q Consensus 16 ~~~v~~~G-~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~ 94 (127)
...+.+|| .++.+|+|||++|||+|++++||+|+|+|+|.++..+++|||||+++...+|+||++.++|++|.||++++
T Consensus 11 ~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq~pI~PG~~~~ 90 (534)
T 1zpu_A 11 WDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPIAPGSTML 90 (534)
T ss_dssp EEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEE
T ss_pred EEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCccccCCcCCCCeEE
Confidence 34678999 89999999999999999999999999999999975799999999999877799999999999999999999
Q ss_pred EEEeCC-CceeeEEccCCCCCc----eeeEEEEcCC
Q psy16567 95 YKFPAM-PSGTFFYHSHVDRRP----YCPEIEEKKK 125 (127)
Q Consensus 95 y~~~~~-~~Gt~~yH~H~~~~~----~g~liV~d~~ 125 (127)
|+|+++ ++||||||||...|. +|+|||+++.
T Consensus 91 Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 126 (534)
T 1zpu_A 91 YNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDS 126 (534)
T ss_dssp EEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTT
T ss_pred EEEEeCccceeEEEEEcCcccccCcceeeEEeCCCC
Confidence 999997 999999999998886 9999999875
No 7
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=9.6e-34 Score=235.03 Aligned_cols=108 Identities=33% Similarity=0.557 Sum_probs=101.4
Q ss_pred eecCCce-EEEEEECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCC-CCEEEEE
Q psy16567 19 VTADGFE-RAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPS-STTFRYK 96 (127)
Q Consensus 19 v~~~G~~-~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~P-G~~~~y~ 96 (127)
+.++|++ +.+|+|||++|||+|++++||+|+|+|+|.+..++++|||||+++...+|+||++.++|++|.| |++++|+
T Consensus 47 ~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~tq~~I~P~G~~~~Y~ 126 (559)
T 2q9o_A 47 MGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYR 126 (559)
T ss_dssp ECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTTEEEEEE
T ss_pred ECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCccccCccCCCCCeEEEE
Confidence 7789998 9999999999999999999999999999999437899999999997777899999999999999 9999999
Q ss_pred EeCCCceeeEEccCCCCCc----eeeEEEEcCCC
Q psy16567 97 FPAMPSGTFFYHSHVDRRP----YCPEIEEKKKT 126 (127)
Q Consensus 97 ~~~~~~Gt~~yH~H~~~~~----~g~liV~d~~~ 126 (127)
|+++++||||||||...|. +|+|||++|++
T Consensus 127 f~~~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~ 160 (559)
T 2q9o_A 127 WRARQYGTSWYHSHFSAQYGNGVVGTIQINGPAS 160 (559)
T ss_dssp EECCSCEEEEEEECSTTGGGGTCEEEEEEECCCS
T ss_pred EECCCCEEEEEEEcccchhcCCceEEEEecCCCc
Confidence 9999999999999998886 99999998764
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=1e-32 Score=226.30 Aligned_cols=109 Identities=39% Similarity=0.692 Sum_probs=101.2
Q ss_pred ceEeecCCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCC----CceEEEEeeeeeecCCCCCCCcccceeeeCCCC
Q psy16567 16 KGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID----REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSST 91 (127)
Q Consensus 16 ~~~v~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~----~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~ 91 (127)
...+.+||.++.+|+|||++ ||+|++++||+|+|+|+|++++ ++++|||||+++...+|+||++.++|++|.||+
T Consensus 13 ~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq~~I~PG~ 91 (503)
T 1hfu_A 13 NANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGH 91 (503)
T ss_dssp EEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTBCCBCTTC
T ss_pred EEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccccCCcCCCC
Confidence 45588999999999999999 9999999999999999999973 689999999999777789999999999999999
Q ss_pred EEEEEEe-CCCceeeEEccCCCCCc----eeeEEEEcCC
Q psy16567 92 TFRYKFP-AMPSGTFFYHSHVDRRP----YCPEIEEKKK 125 (127)
Q Consensus 92 ~~~y~~~-~~~~Gt~~yH~H~~~~~----~g~liV~d~~ 125 (127)
+++|+|+ ++++||||||||...|. +|+|||++|+
T Consensus 92 ~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 130 (503)
T 1hfu_A 92 AFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDN 130 (503)
T ss_dssp EEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred eEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCC
Confidence 9999999 58899999999998886 9999999875
No 9
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.98 E-value=2.3e-32 Score=213.28 Aligned_cols=104 Identities=40% Similarity=0.640 Sum_probs=96.1
Q ss_pred cCCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCC
Q psy16567 21 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM 100 (127)
Q Consensus 21 ~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~ 100 (127)
.+|.++.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.+....++||++.+++++|.||++++|+|+++
T Consensus 17 ~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~p~~t~~~i~PG~~~~y~f~~~ 95 (318)
T 3g5w_A 17 VGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTT-LPHTIHWHGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKAE 95 (318)
T ss_dssp ETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSS-SCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECC
T ss_pred CCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCC-CceeEEecCcCCCCCcccCCCcccccccCCCCCEEEEEEEcC
Confidence 4688899999999999999999999999999999998 899999999998766679999999999999999999999999
Q ss_pred CceeeEEccCCCCC-------ceeeEEEEcCC
Q psy16567 101 PSGTFFYHSHVDRR-------PYCPEIEEKKK 125 (127)
Q Consensus 101 ~~Gt~~yH~H~~~~-------~~g~liV~d~~ 125 (127)
++||||||||...+ .+|+|||++++
T Consensus 96 ~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~ 127 (318)
T 3g5w_A 96 PAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKN 127 (318)
T ss_dssp SCEEEEEECCSSHHHHHHHSCCEEEEEEECSS
T ss_pred CCEEEEEEccCChhhhhccCCCEEEEEEcCCC
Confidence 99999999998643 28999998764
No 10
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.97 E-value=2.1e-31 Score=205.12 Aligned_cols=101 Identities=34% Similarity=0.531 Sum_probs=92.6
Q ss_pred cCCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCC
Q psy16567 21 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM 100 (127)
Q Consensus 21 ~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~ 100 (127)
.+|..+.+|+|||++|||+|++++||+|+|+|+|.++ ++++|||||+.. .++||++.+++++|.||++++|+|+++
T Consensus 49 ~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~-~~~~iH~HG~~~---~~~DG~p~~~~~~i~PG~~~~y~f~~~ 124 (288)
T 3gdc_A 49 APGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGA-HPHTIHFHGVHR---ATMDGTPGIGAGSIAPGQSFTYEFDAT 124 (288)
T ss_dssp ETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSS-SCBCCEESSCCC---GGGSCCTTSTTCSBCTTCEEEEEEECC
T ss_pred CCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCC-CcccEEeccccc---cccCCCCCccceeECCCCEEEEEEEcC
Confidence 3589999999999999999999999999999999999 899999999972 369999998889999999999999999
Q ss_pred CceeeEEccCCCC---Cc----eeeEEEEcCC
Q psy16567 101 PSGTFFYHSHVDR---RP----YCPEIEEKKK 125 (127)
Q Consensus 101 ~~Gt~~yH~H~~~---~~----~g~liV~d~~ 125 (127)
++||||||||... |. +|+|||+++.
T Consensus 125 ~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~ 156 (288)
T 3gdc_A 125 PFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKE 156 (288)
T ss_dssp SCEEEEEECCCSSHHHHHHTTCEEEEEEECSS
T ss_pred CCccEEEEecCcchHHHHhCcCeEEEEEeCCc
Confidence 9999999999974 22 9999999764
No 11
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.97 E-value=3.8e-31 Score=216.48 Aligned_cols=100 Identities=31% Similarity=0.508 Sum_probs=90.5
Q ss_pred cCCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCC
Q psy16567 21 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM 100 (127)
Q Consensus 21 ~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~ 100 (127)
.+|+++.+|+|||++|||+||+++||+|+|+|+|.++ .+++|||||+.+++ ++||++ +++|.||++++|+|+++
T Consensus 65 ~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~-~~tsiHwHGl~~~~--~~DG~p---q~~I~PG~s~~Y~f~~~ 138 (481)
T 3zx1_A 65 IKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLK-EATTIHWHGVPVPP--DQDGSP---HDPILAGEERIYRFEIP 138 (481)
T ss_dssp STTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSS-SCBCCEEETCCCCG--GGSCCT---TSCBCTTCEEEEEEECC
T ss_pred cCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCC-CCeeEEecCcccCC--ccCCCc---cCcCCCCCeEEEEEeCC
Confidence 4789999999999999999999999999999999999 89999999999854 799986 68999999999999997
Q ss_pred C--ceeeEEccCCCCC----c----eeeEEEEcCCC
Q psy16567 101 P--SGTFFYHSHVDRR----P----YCPEIEEKKKT 126 (127)
Q Consensus 101 ~--~Gt~~yH~H~~~~----~----~g~liV~d~~~ 126 (127)
+ +||||||||.... . +|+|||+++++
T Consensus 139 ~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~ 174 (481)
T 3zx1_A 139 QDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKD 174 (481)
T ss_dssp TTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSC
T ss_pred CCCCceEEEeecCCCcchhhhhccceEEEEEcCccc
Confidence 5 7999999998543 2 99999998753
No 12
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.97 E-value=3.9e-31 Score=207.64 Aligned_cols=104 Identities=44% Similarity=0.712 Sum_probs=96.0
Q ss_pred cCCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCC
Q psy16567 21 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM 100 (127)
Q Consensus 21 ~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~ 100 (127)
.+|.++.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.+...+|+||++.+++++|.||++++|+|+++
T Consensus 18 ~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~-~~~siH~HG~~~~~~~~~DGvp~vtq~~I~PG~~~~y~f~~~ 96 (339)
T 2zwn_A 18 APGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTS-LPHTIHWHGVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKAD 96 (339)
T ss_dssp ETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESS-SCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECC
T ss_pred CCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCC-CCccEEeCCCCcCCCcccCCCCccccCccCCCCeEEEEEECC
Confidence 3699999999999999999999999999999999998 899999999999887789999999999999999999999999
Q ss_pred CceeeEEccCCCC-------CceeeEEEEcCC
Q psy16567 101 PSGTFFYHSHVDR-------RPYCPEIEEKKK 125 (127)
Q Consensus 101 ~~Gt~~yH~H~~~-------~~~g~liV~d~~ 125 (127)
++||||||||... ..+|++||+++.
T Consensus 97 ~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~ 128 (339)
T 2zwn_A 97 RIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQ 128 (339)
T ss_dssp SCEEEEEECCSSHHHHTTTSCCEEEEEEECSS
T ss_pred CCEEEEEEecCCchhhhhcCCceEeEEecCCC
Confidence 9999999999754 128999998653
No 13
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.97 E-value=6.8e-31 Score=213.12 Aligned_cols=98 Identities=21% Similarity=0.343 Sum_probs=89.7
Q ss_pred CCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCC
Q psy16567 22 DGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMP 101 (127)
Q Consensus 22 ~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~ 101 (127)
+|+++.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.+... +||++ +++|.||++++|+|++++
T Consensus 34 ~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~tsiHwHG~~~~~~--~DG~~---~~~i~PG~~~~Y~f~~~~ 107 (451)
T 2uxt_A 34 PGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLT-ENVSMTVAGLQVPGP--LMGGP---ARMMSPNADWAPVLPIRQ 107 (451)
T ss_dssp SSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSS-SCBCEEEETCCCCGG--GSCSG---GGCBCTTCEECCEEECCS
T ss_pred CCceeEEEEECCcccCceEEEeCCCEEEEEEEECCC-CCccEEECCccCCCC--CCCCC---cCcCCCCCeEEEEEEcCC
Confidence 789999999999999999999999999999999998 899999999998763 89987 689999999999999986
Q ss_pred -ceeeEEccCCCCC----c----eeeEEEEcCC
Q psy16567 102 -SGTFFYHSHVDRR----P----YCPEIEEKKK 125 (127)
Q Consensus 102 -~Gt~~yH~H~~~~----~----~g~liV~d~~ 125 (127)
+||||||||.... . +|+|||++++
T Consensus 108 ~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~ 140 (451)
T 2uxt_A 108 NAATLWYHANTPNRTAQQVYNGLAGMWLVEDEV 140 (451)
T ss_dssp CSEEEEEEECCTTTHHHHHHTTCEEEEEEECHH
T ss_pred CCcceEEecCCCCchhhhHhhcceEEEEEecCc
Confidence 9999999999553 2 9999999753
No 14
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.96 E-value=2.3e-30 Score=214.01 Aligned_cols=105 Identities=20% Similarity=0.277 Sum_probs=94.0
Q ss_pred ceEeecCCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEE
Q psy16567 16 KGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRY 95 (127)
Q Consensus 16 ~~~v~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y 95 (127)
...+.++|+++.+|+|||++|||+|++++||+|+|+|+|+++ .+++|||||++++. ++||++ +++|.||++++|
T Consensus 47 ~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~-~~tsiHwHGl~~~~--~~DG~~---~~~i~PG~~~~Y 120 (534)
T 3abg_A 47 THQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAE-APNSVHLHGSFSRA--AFDGWA---EDITEPGSFKDY 120 (534)
T ss_dssp EECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSS-SCBCEEEETCCCCT--TTTTCS---SSCBSSCSCCCE
T ss_pred EEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCC-CCceEEECCCcCCC--CCCCCC---CCCCCCCCeEEE
Confidence 455778898899999999999999999999999999999999 89999999998865 689975 568999999999
Q ss_pred EEeCCC-ceeeEEccCCCCCc--------eeeEEEEcCCC
Q psy16567 96 KFPAMP-SGTFFYHSHVDRRP--------YCPEIEEKKKT 126 (127)
Q Consensus 96 ~~~~~~-~Gt~~yH~H~~~~~--------~g~liV~d~~~ 126 (127)
+|++++ +||||||||...+. +|+|||+++++
T Consensus 121 ~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~ 160 (534)
T 3abg_A 121 YYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAE 160 (534)
T ss_dssp EECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTT
T ss_pred EEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcc
Confidence 999976 68999999998752 99999998764
No 15
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.96 E-value=5.6e-30 Score=209.90 Aligned_cols=104 Identities=27% Similarity=0.432 Sum_probs=92.7
Q ss_pred ceEeecCCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEE
Q psy16567 16 KGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRY 95 (127)
Q Consensus 16 ~~~v~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y 95 (127)
+..+.++|+++.+|+|||++|||+|++++||+|+|+|+|+++ .+++|||||+.+.. ++||++ +++|.||++++|
T Consensus 26 ~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~-~~tsiHwHG~~~~~--~~DG~p---~~~i~PG~~~~Y 99 (488)
T 3od3_A 26 AGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLT-EETTLHWHGLEVPG--EVDGGP---QGIIPPGGKRSV 99 (488)
T ss_dssp EEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSS-SCBCCEEETCCCCH--HHHCCT---TCCBCTTCEEEE
T ss_pred EEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCc-CceeEeecccccCc--ccCCCC---cCcCcCCCeEEE
Confidence 344555999999999999999999999999999999999999 89999999999865 689986 679999999999
Q ss_pred EEeCCC-ceeeEEccCCCCCc--------eeeEEEEcCC
Q psy16567 96 KFPAMP-SGTFFYHSHVDRRP--------YCPEIEEKKK 125 (127)
Q Consensus 96 ~~~~~~-~Gt~~yH~H~~~~~--------~g~liV~d~~ 125 (127)
+|++++ +||||||||..... +|+|||++++
T Consensus 100 ~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~ 138 (488)
T 3od3_A 100 TLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDE 138 (488)
T ss_dssp EEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHH
T ss_pred EEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCcc
Confidence 999976 69999999986532 9999999763
No 16
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.96 E-value=1.2e-29 Score=204.88 Aligned_cols=103 Identities=25% Similarity=0.501 Sum_probs=91.8
Q ss_pred ceEeecCCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEE
Q psy16567 16 KGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRY 95 (127)
Q Consensus 16 ~~~v~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y 95 (127)
+..+.++|+++.+|+|||++|||+|++++||+|+|+|+|+++ .+++|||||+++.. ++||++ . +|.||++++|
T Consensus 25 ~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~tsiHwHG~~~~~--~~DG~~-~---~I~PG~~~~Y 97 (439)
T 2xu9_A 25 PTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLP-EPTNLHWHGLPISP--KVDDPF-L---EIPPGESWTY 97 (439)
T ss_dssp EEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSS-SCBCCEEETCCCCT--TTSCTT-C---CBCTTCEEEE
T ss_pred EEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCC-CCcceEeCCCCCCc--cccCCc-c---cCCCCCeEEE
Confidence 456677899999999999999999999999999999999999 89999999999865 799985 2 5999999999
Q ss_pred EEeC--CCceeeEEccCCCC----Cc----eeeEEEEcCC
Q psy16567 96 KFPA--MPSGTFFYHSHVDR----RP----YCPEIEEKKK 125 (127)
Q Consensus 96 ~~~~--~~~Gt~~yH~H~~~----~~----~g~liV~d~~ 125 (127)
+|++ +++||||||||... |. +|+|||+++.
T Consensus 98 ~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~ 137 (439)
T 2xu9_A 98 EFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSL 137 (439)
T ss_dssp EEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGG
T ss_pred EEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCcc
Confidence 9997 47999999999865 22 9999999753
No 17
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.96 E-value=7.3e-30 Score=197.71 Aligned_cols=97 Identities=26% Similarity=0.437 Sum_probs=85.4
Q ss_pred EEEEEECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCC-----
Q psy16567 26 RAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM----- 100 (127)
Q Consensus 26 ~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~----- 100 (127)
+.+|.+||++|||+||+++||+|+|+|+|.++ ++++|||||+.+.. ++||++ .++++|.||++++|+|++.
T Consensus 46 ~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~-~~~siH~HG~~~~~--~~DG~~-~~~~~i~PG~t~~Y~~~~~~~~~~ 121 (299)
T 3t9w_A 46 YGLAPGGATVPGPVLEMWEGDTLEIDLVNTTD-RVLSLHPHGVDYDV--NSDGTL-MNGSAVMPGQTRRYTWRSHVGYRR 121 (299)
T ss_dssp EESSTTCCBSSCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG--GGSCCT-TTTCCBCTTCEEEEEEBCCCCEEC
T ss_pred eeecCCCCCccCceEEEECCeEEEEEEEECCC-CCccEEeCCcccCC--ccCCCc-cccCccCCCCeEEEEEEeeccccc
Confidence 34455699999999999999999999999999 89999999998865 689996 7789999999999999985
Q ss_pred --------CceeeEEccCCCCCc----------eeeEEEEcCCC
Q psy16567 101 --------PSGTFFYHSHVDRRP----------YCPEIEEKKKT 126 (127)
Q Consensus 101 --------~~Gt~~yH~H~~~~~----------~g~liV~d~~~ 126 (127)
++||||||||...+. +|+|||+++.+
T Consensus 122 ~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~ 165 (299)
T 3t9w_A 122 ADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD 165 (299)
T ss_dssp TTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC
T ss_pred CCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEecccc
Confidence 579999999986532 99999998764
No 18
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.96 E-value=1.8e-29 Score=207.48 Aligned_cols=108 Identities=20% Similarity=0.270 Sum_probs=92.1
Q ss_pred ceEeecCCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCC---------------------CceEEEEeeeeeecCC
Q psy16567 16 KGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID---------------------REVTLHWHGVYQKVTP 74 (127)
Q Consensus 16 ~~~v~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~---------------------~~~siH~HG~~~~~~~ 74 (127)
...+.+++.++.+|+|||++|||+|++++||+|+|+|+|+++. .+++|||||+.+..
T Consensus 36 ~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsiHwHGl~~~~-- 113 (513)
T 2wsd_A 36 THQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPD-- 113 (513)
T ss_dssp EECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCEEEETCCCCG--
T ss_pred eeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEEEcCCCcCCC--
Confidence 3445566678999999999999999999999999999999972 18999999999864
Q ss_pred CCCCCcc--cceeeeCCC---CEEEEEEeCC-CceeeEEccCCCCC--------ceeeEEEEcCC
Q psy16567 75 WMDGVPM--VTQCPIPSS---TTFRYKFPAM-PSGTFFYHSHVDRR--------PYCPEIEEKKK 125 (127)
Q Consensus 75 ~~DG~~~--~~~~~i~PG---~~~~y~~~~~-~~Gt~~yH~H~~~~--------~~g~liV~d~~ 125 (127)
++||++. +++++|.|| ++++|+|+++ ++||||||||.... .+|+|||+++.
T Consensus 114 ~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~ 178 (513)
T 2wsd_A 114 DSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPK 178 (513)
T ss_dssp GGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGG
T ss_pred ccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccc
Confidence 6899985 577789999 5559999985 79999999999753 29999999764
No 19
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.96 E-value=3.3e-29 Score=207.79 Aligned_cols=105 Identities=17% Similarity=0.255 Sum_probs=88.6
Q ss_pred cceEeecCCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCCCc----------------------------------
Q psy16567 15 RKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDRE---------------------------------- 60 (127)
Q Consensus 15 ~~~~v~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~---------------------------------- 60 (127)
...++.+++..+.+|+|||++|||+|++++||+|+|+|+|+++ .+
T Consensus 42 ~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~-~~~~~h~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (612)
T 3gyr_A 42 TWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIP-KGSEYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKD 120 (612)
T ss_dssp EEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCC-TTCCCSEEEEEECCCSTTSCCGGGSCSCTTCCCCHH
T ss_pred EEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCC-CCcccccccccccCCCCCCccccccccccccccccc
Confidence 3455667878899999999999999999999999999999986 44
Q ss_pred -------eEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCC-ceeeEEccCCCCC----c----eeeEEEEcC
Q psy16567 61 -------VTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMP-SGTFFYHSHVDRR----P----YCPEIEEKK 124 (127)
Q Consensus 61 -------~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~-~Gt~~yH~H~~~~----~----~g~liV~d~ 124 (127)
+++||||+++.. ++||++ +++|.||++|+|+|++++ +||||||+|..+. . +|+|||+++
T Consensus 121 ~~~~~~~ttiHwHGl~~~~--~~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl~G~liI~d~ 195 (612)
T 3gyr_A 121 VAALPAWSVTHLHGAQTGG--GNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDD 195 (612)
T ss_dssp HHTCCCCBCEEEETCCCCT--TTSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTTCEEEEEEECH
T ss_pred cccCCCCceEEcCCCccCC--cccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhccceeEEEEcCc
Confidence 577888887743 688865 789999999999999975 6999999998553 2 999999975
Q ss_pred C
Q psy16567 125 K 125 (127)
Q Consensus 125 ~ 125 (127)
+
T Consensus 196 ~ 196 (612)
T 3gyr_A 196 E 196 (612)
T ss_dssp H
T ss_pred c
Confidence 3
No 20
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.96 E-value=2.4e-29 Score=192.58 Aligned_cols=101 Identities=27% Similarity=0.442 Sum_probs=88.9
Q ss_pred CCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCC
Q psy16567 22 DGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMP 101 (127)
Q Consensus 22 ~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~ 101 (127)
+.....++++||++|||+||+++||+|+|+|+|.++ ++++|||||+.+.. ++||++ +++++|.||++++|+|++++
T Consensus 20 ~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~-~~~siH~HG~~~~~--~~DG~~-~t~~~i~pG~~~~Y~f~~~~ 95 (276)
T 3kw8_A 20 GQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMD-VRASLHVHGLDYEI--SSDGTA-MNKSDVEPGGTRTYTWRTHK 95 (276)
T ss_dssp SCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG--GGSCCT-TTTCSBCTTCEEEEEEECCC
T ss_pred CceecceeccCCcccCCeEEEECCCEEEEEEEECCC-CCccEeecCcccCC--ccCCCc-CCcCCCCCCCEEEEEEEcCC
Confidence 334456678899999999999999999999999998 99999999999865 699998 78899999999999999964
Q ss_pred -------------ceeeEEccCCCC------Cc----eeeEEEEcCCC
Q psy16567 102 -------------SGTFFYHSHVDR------RP----YCPEIEEKKKT 126 (127)
Q Consensus 102 -------------~Gt~~yH~H~~~------~~----~g~liV~d~~~ 126 (127)
+|+||||||... |. +|+|||+++.+
T Consensus 96 ~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~ 143 (276)
T 3kw8_A 96 PGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD 143 (276)
T ss_dssp CEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC
T ss_pred ccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCC
Confidence 699999999964 22 99999998753
No 21
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.95 E-value=7.3e-29 Score=192.96 Aligned_cols=103 Identities=27% Similarity=0.456 Sum_probs=87.9
Q ss_pred ecCCce-EEEEEECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEe
Q psy16567 20 TADGFE-RAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFP 98 (127)
Q Consensus 20 ~~~G~~-~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~ 98 (127)
.++|.. +.+|..|+++|||+||+++||+|+|+|+|.++ ++++|||||+.+.. .+||++ .++++|.||++++|+|+
T Consensus 23 ~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~--~~dG~~-~~~~~i~PG~~~~Y~~~ 98 (313)
T 3tas_A 23 LGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMD-VPVSLHVHGLDYEI--SSDGTK-QSRSDVEPGGTRTYTWR 98 (313)
T ss_dssp CGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG--GGSCST-TTTCCBCTTCEEEEEEB
T ss_pred cCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCC-CCccEeecCCcCCc--cCCCCc-cccCCcCCCCEEEEEEE
Confidence 345533 45567799999999999999999999999999 99999999998865 589997 57889999999999998
Q ss_pred CC-------------CceeeEEccCCCCCc----------eeeEEEEcCCC
Q psy16567 99 AM-------------PSGTFFYHSHVDRRP----------YCPEIEEKKKT 126 (127)
Q Consensus 99 ~~-------------~~Gt~~yH~H~~~~~----------~g~liV~d~~~ 126 (127)
+. ++||||||||...+. +|+|||+++.+
T Consensus 99 ~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~ 149 (313)
T 3tas_A 99 THVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD 149 (313)
T ss_dssp CCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC
T ss_pred eccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeecccc
Confidence 75 569999999986641 99999998754
No 22
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.95 E-value=5.1e-29 Score=202.06 Aligned_cols=95 Identities=22% Similarity=0.419 Sum_probs=85.1
Q ss_pred EEEEEECCC-CCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCC-Cce
Q psy16567 26 RAILSINRQ-LPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM-PSG 103 (127)
Q Consensus 26 ~~~~~~ng~-~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~-~~G 103 (127)
..+|+|||+ +|||+|++++||+|+|+|+|+++ .+++|||||+.+.. ++||++. ++|.||++++|+|+++ ++|
T Consensus 25 l~~~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~-~~tsiHwHG~~~~~--~~DG~~~---~~i~PG~~~~Y~f~~~~~~G 98 (448)
T 3aw5_A 25 ATASGYMAEGVLNPTIILRRGQRVDMTLKNKLT-EPTIVHWHGFDVNW--HNDAHPS---FAITPGESYNYSFDVVNRAG 98 (448)
T ss_dssp EETTEEEETTEESCEEEEETTCEEEEEEEECSS-SCBCEEEETCCCCH--HHHTCGG---GCBCTTCEEEEEEECCSCSE
T ss_pred EEEEEECCccccCceEEEeCCCEEEEEEEECCC-CceeEEeCCccCCC--ccCCCCC---ccCCCCCEEEEEEEcCCCCC
Confidence 344999999 99999999999999999999999 89999999999864 6899986 7899999999999997 799
Q ss_pred eeEEccCCCCC----c----eeeEEEEcCCC
Q psy16567 104 TFFYHSHVDRR----P----YCPEIEEKKKT 126 (127)
Q Consensus 104 t~~yH~H~~~~----~----~g~liV~d~~~ 126 (127)
|||||||.... . +|+|||+++++
T Consensus 99 T~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~ 129 (448)
T 3aw5_A 99 TYLYHPHPHGLTAKQFYMGQLGLVIVEDSGS 129 (448)
T ss_dssp EEEEEECCTTTHHHHHHTTCCEEEEEECTTT
T ss_pred ceEeccCCCCchHHHHhccceEEEEEeCCcc
Confidence 99999996443 2 99999998753
No 23
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.94 E-value=2.5e-27 Score=198.59 Aligned_cols=105 Identities=17% Similarity=0.246 Sum_probs=90.1
Q ss_pred ceEeecCCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCCC------------------------------------
Q psy16567 16 KGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDR------------------------------------ 59 (127)
Q Consensus 16 ~~~v~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~------------------------------------ 59 (127)
...+.+++.++.+|+|||++|||+|++++||+|+|+++|++++.
T Consensus 43 ~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~p~~~g~~~~~~~~ 122 (612)
T 2g23_A 43 WVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVA 122 (612)
T ss_dssp EECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSCSCTTCCCCHHHH
T ss_pred EEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCccccccccccccccccccc
Confidence 33455666789999999999999999999999999999999831
Q ss_pred ----ceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCC-CceeeEEccCCCC----Cc----eeeEEEEcCC
Q psy16567 60 ----EVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM-PSGTFFYHSHVDR----RP----YCPEIEEKKK 125 (127)
Q Consensus 60 ----~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~-~~Gt~~yH~H~~~----~~----~g~liV~d~~ 125 (127)
.+++||||+++.. .+||.+ +++|.||++++|+|+++ ++||||||||... |. +|+|||++++
T Consensus 123 ~~~~~tsiH~HG~~~~~--~~DG~p---~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~ 196 (612)
T 2g23_A 123 ALPAWSVTHLHGAQTGG--GNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDE 196 (612)
T ss_dssp TCCCCBCEEEETCCCCT--TTSCCG---GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTTTCEEEEEEECHH
T ss_pred ccCCceEEEcCCCCCCC--ccCCCC---cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhccceeEEEEcCcc
Confidence 1899999999865 489875 67899999999999996 7999999999976 32 9999999753
No 24
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.94 E-value=2.2e-26 Score=179.81 Aligned_cols=101 Identities=25% Similarity=0.387 Sum_probs=86.1
Q ss_pred Eeec-CCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCC-CceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEE
Q psy16567 18 CVTA-DGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID-REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRY 95 (127)
Q Consensus 18 ~v~~-~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~-~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y 95 (127)
.+.+ +|.++.+|+|||++|||+|++++||+|+|+|+|.+.. .++++||||+.. .||.+... .|.||++++|
T Consensus 49 ~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~-----~dG~~~~~--~i~PG~~~~y 121 (327)
T 1kbv_A 49 TMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGGAAAT--FTAPGRTSTF 121 (327)
T ss_dssp EEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGTTTT--CBCTTEEEEE
T ss_pred EEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcccc-----CCCCCcce--eecCCCEEEE
Confidence 3444 8999999999999999999999999999999999852 589999999852 67765432 5999999999
Q ss_pred EEeCCCceeeEEccCCCC---C----ceeeEEEEcCC
Q psy16567 96 KFPAMPSGTFFYHSHVDR---R----PYCPEIEEKKK 125 (127)
Q Consensus 96 ~~~~~~~Gt~~yH~H~~~---~----~~g~liV~d~~ 125 (127)
+|+++++||||||||... | ++|+|||++++
T Consensus 122 ~f~~~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~ 158 (327)
T 1kbv_A 122 SFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKE 158 (327)
T ss_dssp EEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECTT
T ss_pred EEECCCCeEEEEEeCCCChhhhhhcceEEEEEEecCC
Confidence 999999999999999853 2 29999999753
No 25
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.93 E-value=3.5e-26 Score=178.63 Aligned_cols=102 Identities=22% Similarity=0.320 Sum_probs=82.9
Q ss_pred ceEeecCCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCC-CceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEE
Q psy16567 16 KGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID-REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFR 94 (127)
Q Consensus 16 ~~~v~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~-~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~ 94 (127)
...+.+||.++.+|+|||++|||+|++++||+|+|+|+|.+.. ..|.+|+||.. +.||.+.+. .|.||++++
T Consensus 43 ~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~-----~~~~~~~~~--~i~pG~~~~ 115 (336)
T 1oe1_A 43 KMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGAT-----GALGGAKLT--NVNPGEQAT 115 (336)
T ss_dssp EEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTTCCSCBCCEETTSC-----SGGGGGGGC--CBCTTEEEE
T ss_pred EEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCCCCccccceECCCC-----CCCCCcceE--EeCCCCEEE
Confidence 3345567999999999999999999999999999999998641 45666666642 345544444 499999999
Q ss_pred EEEeCCCceeeEEccCCCCC--------ceeeEEEEcC
Q psy16567 95 YKFPAMPSGTFFYHSHVDRR--------PYCPEIEEKK 124 (127)
Q Consensus 95 y~~~~~~~Gt~~yH~H~~~~--------~~g~liV~d~ 124 (127)
|+|+++++||||||||.... ++|+|||+++
T Consensus 116 y~f~~~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~ 153 (336)
T 1oe1_A 116 LRFKADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPR 153 (336)
T ss_dssp EEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECT
T ss_pred EEEECCCCeEEEEecCCCCchhHHHhCCCeEEEEEecC
Confidence 99999999999999998652 2999999864
No 26
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.93 E-value=6.1e-26 Score=177.24 Aligned_cols=98 Identities=17% Similarity=0.184 Sum_probs=82.7
Q ss_pred cCCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCC
Q psy16567 21 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM 100 (127)
Q Consensus 21 ~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~ 100 (127)
.+|.++.+|+|||++|||+|++++||+|+|+|.|.. +++||||+++......||.+.++ .|.||++++|+|+++
T Consensus 47 ~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~----~~~h~Hg~~~~~~~~~~~~~~~~--~i~PG~~~~y~f~~~ 120 (333)
T 1mzy_A 47 DEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINPP----ENTMPHNIDFHAATGALGGGGLT--LINPGEKVVLRFKAT 120 (333)
T ss_dssp ETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECT----TCCSCBCCEETTSCSGGGGGGGC--CBCTTEEEEEEEECC
T ss_pred CCCcEEEEEEECCccCCCcEEecCCCEEEEEEEECC----CCcccccceecCCCCCCCCCcee--EeCCCCEEEEEEECC
Confidence 369999999999999999999999999999999973 57999999876432244444444 499999999999999
Q ss_pred CceeeEEccCCCC-----Cc----eeeEEEEcC
Q psy16567 101 PSGTFFYHSHVDR-----RP----YCPEIEEKK 124 (127)
Q Consensus 101 ~~Gt~~yH~H~~~-----~~----~g~liV~d~ 124 (127)
++||||||||... |. +|++||+++
T Consensus 121 ~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~ 153 (333)
T 1mzy_A 121 RAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPR 153 (333)
T ss_dssp SCEEEEEECCCSTTHHHHHHHTTCEEEEEEECT
T ss_pred CCEEEEEeecCCcccchhhhhCCCEEEEEEccC
Confidence 9999999999974 33 999999864
No 27
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.93 E-value=6.5e-26 Score=177.40 Aligned_cols=102 Identities=18% Similarity=0.255 Sum_probs=81.4
Q ss_pred EeecCCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEE
Q psy16567 18 CVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKF 97 (127)
Q Consensus 18 ~v~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~ 97 (127)
.+.+||.++.+|+|||++|||+|++++||+|+|+|.|.+ +++||||+++......||..... .|.||++++|+|
T Consensus 51 ~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~----~~~~~hg~~~~~~~~~~~~~~~~--~i~PG~~~~y~~ 124 (340)
T 2bw4_A 51 VIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD----TNTLLHNIDFHAATGALGGGALT--QVNPGEETTLRF 124 (340)
T ss_dssp ECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT----TCCSCBCCEETTSCSGGGGGGGC--CBCTTEEEEEEE
T ss_pred EECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC----CCCccCcceeCCcCCCCCCccce--EeCCCCEEEEEE
Confidence 344569999999999999999999999999999999986 35667776654322233333333 499999999999
Q ss_pred eCCCceeeEEccCCCC----Cc----eeeEEEEcCC
Q psy16567 98 PAMPSGTFFYHSHVDR----RP----YCPEIEEKKK 125 (127)
Q Consensus 98 ~~~~~Gt~~yH~H~~~----~~----~g~liV~d~~ 125 (127)
+++++||||||||... |. +|+|||++++
T Consensus 125 ~~~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~ 160 (340)
T 2bw4_A 125 KATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRD 160 (340)
T ss_dssp ECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTB
T ss_pred ECCCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCc
Confidence 9999999999999874 32 9999998753
No 28
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.93 E-value=2.6e-26 Score=177.99 Aligned_cols=94 Identities=20% Similarity=0.279 Sum_probs=79.0
Q ss_pred EEEECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCccc------c--eeeeCCCCEEEEEEeC
Q psy16567 28 ILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMV------T--QCPIPSSTTFRYKFPA 99 (127)
Q Consensus 28 ~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~------~--~~~i~PG~~~~y~~~~ 99 (127)
.+++| ++|||+|++++||+|+|+|+|.++ ++++|||||+.+.. .+||++.. + +++|.||++++|+|++
T Consensus 51 ~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~~--~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~ 126 (306)
T 1sdd_A 51 QSRTS-GLLGPTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYSK--FSEGASYSDHTLPMEKMDDAVAPGQEYTYEWII 126 (306)
T ss_dssp CCSSC-CSCCCCEEEETTCEEEEEEEECSS-SCBCCEEESSCCCT--TTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEEC
T ss_pred ccccC-CccCCEEEEeCCCEEEEEEEECCC-CcccEeecceeccc--ccCCCccCCCCcccccCCCccCCCCeEEEEEEe
Confidence 35678 589999999999999999999998 99999999999643 35665542 2 5899999999999999
Q ss_pred CCc----------eeeEEccCCCC--Cc----eeeEEEEcCC
Q psy16567 100 MPS----------GTFFYHSHVDR--RP----YCPEIEEKKK 125 (127)
Q Consensus 100 ~~~----------Gt~~yH~H~~~--~~----~g~liV~d~~ 125 (127)
+++ ||||||||... |. +|+|||+++.
T Consensus 127 ~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~ 168 (306)
T 1sdd_A 127 SEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKG 168 (306)
T ss_dssp CGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTT
T ss_pred CCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCC
Confidence 654 89999999876 32 9999999874
No 29
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.93 E-value=1.4e-25 Score=180.68 Aligned_cols=98 Identities=27% Similarity=0.387 Sum_probs=84.5
Q ss_pred cCCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCC-CceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeC
Q psy16567 21 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID-REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPA 99 (127)
Q Consensus 21 ~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~-~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~ 99 (127)
.+|.++.+|+|||++|||+|++++||+|+|+|.|.++. ++|+|||||+.. .||.+... +|.||++++|+|++
T Consensus 43 ~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~~~~~--~i~pg~~~~y~f~~ 115 (442)
T 2zoo_A 43 ADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGGAESS--FTAPGHTSTFNFKA 115 (442)
T ss_dssp ETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGGGC--CBCTTCEEEEEEEC
T ss_pred CCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCCCccE--EECCCCEEEEEEEc
Confidence 48999999999999999999999999999999999752 589999999863 57765432 69999999999999
Q ss_pred CCceeeEEccCCCC---C----ceeeEEEEcCC
Q psy16567 100 MPSGTFFYHSHVDR---R----PYCPEIEEKKK 125 (127)
Q Consensus 100 ~~~Gt~~yH~H~~~---~----~~g~liV~d~~ 125 (127)
+++||||||||... | ++|+|||++++
T Consensus 116 ~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~ 148 (442)
T 2zoo_A 116 LNPGLYIYHCATAPVGMHIANGMYGLILVEPKE 148 (442)
T ss_dssp CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTT
T ss_pred CCCeEEEEecCCCChHHHHhCccEEEEEEeCCC
Confidence 99999999998643 2 29999998653
No 30
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=99.93 E-value=7.4e-26 Score=198.91 Aligned_cols=108 Identities=25% Similarity=0.307 Sum_probs=90.9
Q ss_pred EeecCCceEEEE-------EECCC--------CCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeec----CCCCCC
Q psy16567 18 CVTADGFERAIL-------SINRQ--------LPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKV----TPWMDG 78 (127)
Q Consensus 18 ~v~~~G~~~~~~-------~~ng~--------~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~----~~~~DG 78 (127)
.+..+|+.+.+. +||+. +|||+||+++||+|+|+|+|.++ ++++|||||+.++. .+|.||
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PGP~Ir~~~GD~v~v~v~N~l~-~~tsiHwHGl~~~~~~DG~~~~dg 138 (1065)
T 2j5w_A 60 PDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLGPIIKAETGDKVYVHLKNLAS-RPYTFHSHGITYYKEHEGAIYPDN 138 (1065)
T ss_dssp SSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSCCCEEEETTCEEEEEEEEESS-SCBCCEESSSBCCGGGCCCCSCCC
T ss_pred CcccCCeEeEEEEEEecceeecCCcccccccCCcCCeEEEeCCeEEEEEEEECCC-CCeeEEeCCccCCcccCCcccCCC
Confidence 344556555555 56666 89999999999999999999999 89999999999873 356788
Q ss_pred Ccc--cceeeeCCCCEEEEEEeCCC----------ceeeEEccCCCCCc------eeeEEEEcCCC
Q psy16567 79 VPM--VTQCPIPSSTTFRYKFPAMP----------SGTFFYHSHVDRRP------YCPEIEEKKKT 126 (127)
Q Consensus 79 ~~~--~~~~~i~PG~~~~y~~~~~~----------~Gt~~yH~H~~~~~------~g~liV~d~~~ 126 (127)
+++ +++++|.||++++|+|++.+ +||||||||.+.++ +|+|||+++++
T Consensus 139 ~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~ 204 (1065)
T 2j5w_A 139 TTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDS 204 (1065)
T ss_dssp CCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSEEEEEEECCSSHHHHHHHTCEEEEEEECTTC
T ss_pred CCcccccccccCCCCEEEEEEEeccccCCccCCCCceEEEEEeccCchhHhhCccEEEEEEecCcc
Confidence 776 67899999999999999976 39999999998763 99999998753
No 31
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.91 E-value=3.2e-26 Score=195.23 Aligned_cols=97 Identities=24% Similarity=0.224 Sum_probs=81.6
Q ss_pred CceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcc--------cceeeeCCCCEEE
Q psy16567 23 GFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM--------VTQCPIPSSTTFR 94 (127)
Q Consensus 23 G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~--------~~~~~i~PG~~~~ 94 (127)
|+.+..|+ ++|||+||+++||+|+|+|+|.++ ++++|||||+.+.. ++||++. +++++|.||++++
T Consensus 63 ~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~-~~tsIHwHGl~~~~--~~DG~p~~Dg~~~~~vtq~~I~PG~s~t 136 (742)
T 2r7e_A 63 AKPRPPWM---GLLGPTIQAEVYDTVVITLKNMAS-HPVSLHAVGVSYWK--ASEGAEYDDQTSQREKEDDKVFPGGSHT 136 (742)
T ss_dssp SSCSTTTT---TTSEEEEEECSEEEEECCEECCSS-SCCCCCCSSSCCCS--SSSCCCSSCSCCSSSSSSSSCCTTCEEC
T ss_pred Cccccccc---CCcCCeEEEECCCEEEEEEEECCC-CCEeEEecCcccCc--cccCCccCCCCcccccccCcCCCCCeEE
Confidence 33444443 799999999999999999999998 99999999998754 4566554 6789999999999
Q ss_pred EEEeCC----------CceeeEEccCCCCC--c----eeeEEEEcCC
Q psy16567 95 YKFPAM----------PSGTFFYHSHVDRR--P----YCPEIEEKKK 125 (127)
Q Consensus 95 y~~~~~----------~~Gt~~yH~H~~~~--~----~g~liV~d~~ 125 (127)
|+|++. ++||||||||.+.. . +|+|||++++
T Consensus 137 Y~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~ 183 (742)
T 2r7e_A 137 YVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREG 183 (742)
T ss_dssp CEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSS
T ss_pred EEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCc
Confidence 999974 35999999999873 2 9999999865
No 32
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.91 E-value=1.1e-24 Score=171.44 Aligned_cols=90 Identities=30% Similarity=0.521 Sum_probs=80.3
Q ss_pred CCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCc---------
Q psy16567 32 NRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPS--------- 102 (127)
Q Consensus 32 ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~--------- 102 (127)
||++|||+|++++||+|+|+|+|.++ .+++|||||+.+.. ++||++ +++++|.||++++|+|+++++
T Consensus 71 ng~~pGP~I~v~~Gd~v~v~~~N~l~-~~~sih~HG~~~~~--~~DG~~-~t~~~I~PG~~~~y~f~~~~pg~~~~g~~~ 146 (343)
T 3cg8_A 71 KASVPGPLIEVNEGDTLHIEFTNTMD-VRASLHVHGLDYEI--SSDGTA-MNKSDVEPGGTRTYTWRTHKPGRRDDGTWR 146 (343)
T ss_dssp CCBSSCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG--GGSCCT-TTTCSBCTTCEEEEEEECCCCEECTTSCEE
T ss_pred CCCccCCEEEEECCCEEEEEEEECCC-CCeeEEecCcccCC--cCCCcc-cccccccCCCEEEEEEEeCCCCcccccccC
Confidence 69999999999999999999999998 89999999999864 699998 778899999999999998653
Q ss_pred ----eeeEEccCCCC------Cc----eeeEEEEcCC
Q psy16567 103 ----GTFFYHSHVDR------RP----YCPEIEEKKK 125 (127)
Q Consensus 103 ----Gt~~yH~H~~~------~~----~g~liV~d~~ 125 (127)
|+||||||... |. +|++||+++.
T Consensus 147 ~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~ 183 (343)
T 3cg8_A 147 PGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG 183 (343)
T ss_dssp CCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT
T ss_pred CCCceEEEEecCccccccchhhhhcCCeEEEEEecCC
Confidence 89999999743 22 9999999765
No 33
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.91 E-value=6.3e-25 Score=184.36 Aligned_cols=90 Identities=27% Similarity=0.338 Sum_probs=70.1
Q ss_pred CCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccc--------eeeeCCCCEEEEEEeCCC---
Q psy16567 33 RQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVT--------QCPIPSSTTFRYKFPAMP--- 101 (127)
Q Consensus 33 g~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~--------~~~i~PG~~~~y~~~~~~--- 101 (127)
.++|||+|++++||+|+|+|+|.++ .+++|||||+.+.. ++||++.++ +++|.||++++|+|++++
T Consensus 64 ~~~pGP~I~~~~Gd~v~v~~~N~l~-~~~siH~HGl~~~~--~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~g 140 (647)
T 1sdd_B 64 LGILGPVIRAEVDDVIQVRFKNLAS-RPYSLHAHGLSYEK--SSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSG 140 (647)
T ss_dssp GTTSCCCEEEETTCEEEEEECCCSS-SCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTS
T ss_pred cCCcCceEEEeCCCEEEEEEEECCC-CceEEecCcceeCC--CCCCccccCCCCcccccCcccCCCCeEEEEEECCcccC
Confidence 4789999999999999999999999 89999999999864 699998765 889999999999999975
Q ss_pred ---ce----eeEEccCCCC--C----ceeeEEEEcCC
Q psy16567 102 ---SG----TFFYHSHVDR--R----PYCPEIEEKKK 125 (127)
Q Consensus 102 ---~G----t~~yH~H~~~--~----~~g~liV~d~~ 125 (127)
+| |||||||.+. | .+|+|||++++
T Consensus 141 p~~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~ 177 (647)
T 1sdd_B 141 PENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKG 177 (647)
T ss_dssp CCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTT
T ss_pred CCCCCCCceEEEEccCCCCcccccccCccCEEEeeCC
Confidence 58 9999999953 2 29999999875
No 34
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.90 E-value=1.7e-24 Score=185.29 Aligned_cols=89 Identities=19% Similarity=0.205 Sum_probs=80.5
Q ss_pred CCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCC----------Cce
Q psy16567 34 QLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM----------PSG 103 (127)
Q Consensus 34 ~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~----------~~G 103 (127)
++|||+||+++||+|+|+|+|.++ ++++|||||+.+.... .||++. ++++|.||++++|+|++. ++|
T Consensus 195 ~~pGP~Ir~~~GD~v~v~~~N~l~-~~~siH~HG~~~~~~~-~dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~G 271 (770)
T 2r7e_B 195 GLLGPYIRAEVEDNIMVTFRNQAS-RPYSFYSSLISYEEDQ-RQGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCK 271 (770)
T ss_dssp CSCCCCCCCCSSSCEEEEEECCSS-SCCCCCBTTCCCCCCS-SSCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEE
T ss_pred CCCCCeEEEEcCCEEEEEEEECCC-CCcceeeccccccccc-CCCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCe
Confidence 579999999999999999999998 8999999999988754 369876 789999999999999997 789
Q ss_pred eeEEccCCCCCc------eeeEEEEcCC
Q psy16567 104 TFFYHSHVDRRP------YCPEIEEKKK 125 (127)
Q Consensus 104 t~~yH~H~~~~~------~g~liV~d~~ 125 (127)
|||||||.+... +|+|||+++.
T Consensus 272 t~wYHsh~~~~~q~~~GL~G~liV~~~~ 299 (770)
T 2r7e_B 272 AWAYSSDVDLEKDVHSGLIGPLLVCHTN 299 (770)
T ss_dssp EEEECCCSSSSHHHHTSCCEEEEEECST
T ss_pred eEEeeccCCcHHHHhCCceeeEEECCCc
Confidence 999999998742 9999999875
No 35
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.87 E-value=4.7e-23 Score=175.78 Aligned_cols=90 Identities=27% Similarity=0.384 Sum_probs=77.7
Q ss_pred CCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCC-----CCcccceeeeCCCCEEEEEEeCCC-c-----
Q psy16567 34 QLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMD-----GVPMVTQCPIPSSTTFRYKFPAMP-S----- 102 (127)
Q Consensus 34 ~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~D-----G~~~~~~~~i~PG~~~~y~~~~~~-~----- 102 (127)
.+|||+||+++||+|+|+|+|.++ ++++|||||+.+.. +|+| |++.+++++|.||++++|+|++.+ +
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~-~~~siHwHGl~~~~-~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~ 525 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQAS-RPYNIYPHGITDVR-PLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKS 525 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSS-SCBCCEETTCSEEC-CTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCC-CCcCEEecccccCC-cccccccCCCCcccccccCCCCCeEEEEEEeccccCCccc
Confidence 579999999999999999999999 99999999998753 4565 456667899999999999999964 3
Q ss_pred ----eeeEEccCCCCCc------eeeEEEEcCC
Q psy16567 103 ----GTFFYHSHVDRRP------YCPEIEEKKK 125 (127)
Q Consensus 103 ----Gt~~yH~H~~~~~------~g~liV~d~~ 125 (127)
||||||||...+. +|+|||+++.
T Consensus 526 d~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~ 558 (742)
T 2r7e_A 526 DPRCLTRYYSSFVNMERDLASGLIGPLLICYKE 558 (742)
T ss_dssp SCSCCCCEEECCSSSSSTGGGSCCEECCCBCCC
T ss_pred CCCceEEEEecCcchhhhhhccceeeEEEcCcc
Confidence 3999999997753 9999999764
No 36
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=99.85 E-value=2.5e-21 Score=155.79 Aligned_cols=97 Identities=24% Similarity=0.339 Sum_probs=83.2
Q ss_pred CCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCC-CCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCC
Q psy16567 22 DGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMI-DREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM 100 (127)
Q Consensus 22 ~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~-~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~ 100 (127)
+|....+|+|||++|+|+|++++||+++|+|.|.+. ...++|||||+. ..||.+... .|.||++++|.|+++
T Consensus 179 ~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~-----~~DG~~~~~--~i~pG~~~~~~~~~~ 251 (447)
T 2dv6_A 179 DNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT-----GPGGAAAFT--QTDPGEETVVTFKAL 251 (447)
T ss_dssp TTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGGGGC--CBCTTCEEEEEEECC
T ss_pred CCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeecccc-----CCCCCCccE--EeCCCCEEEEEEECC
Confidence 688889999999999999999999999999999974 267999999975 268876543 489999999999999
Q ss_pred CceeeEEccCCCC---C----ceeeEEEEcCC
Q psy16567 101 PSGTFFYHSHVDR---R----PYCPEIEEKKK 125 (127)
Q Consensus 101 ~~Gt~~yH~H~~~---~----~~g~liV~d~~ 125 (127)
++|+||||||... | ++|+|||+++.
T Consensus 252 ~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~ 283 (447)
T 2dv6_A 252 IPGIYVYHCATPSVPTHITNGMYGLLLVEPEG 283 (447)
T ss_dssp SCEEEEEECCSSSHHHHHHTTCEEEEEEECTT
T ss_pred CCeEEEEEeCCCChHHHHhCCCEEEEEEeCCC
Confidence 9999999999742 2 29999998653
No 37
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.77 E-value=1.7e-18 Score=132.35 Aligned_cols=94 Identities=21% Similarity=0.340 Sum_probs=78.6
Q ss_pred EEECCCC--CCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCC--------cccceeeeCCCCEEEEEEe
Q psy16567 29 LSINRQL--PGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGV--------PMVTQCPIPSSTTFRYKFP 98 (127)
Q Consensus 29 ~~~ng~~--pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~--------~~~~~~~i~PG~~~~y~~~ 98 (127)
|+|||+. +.|.|++++||+|+|+|.|... +.|+||+||+.+... .+|. .......|.||+++++.|.
T Consensus 157 ~~iNG~~~~~~p~i~v~~G~~vri~l~N~~~-~~Hp~HlHG~~f~v~--~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~ 233 (276)
T 3kw8_A 157 MTINNRKPHTGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQII 233 (276)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEE
T ss_pred cccceecccCCCCEEEecCCEEEEEEecCCC-cceeEEEccceeEEe--ccCccCCCcccccCCccEEeCCCceEEEEEE
Confidence 7999997 7899999999999999999988 899999999876542 3442 1234456899999999999
Q ss_pred CC---CceeeEEccCCCCCc----eeeEEEEcCC
Q psy16567 99 AM---PSGTFFYHSHVDRRP----YCPEIEEKKK 125 (127)
Q Consensus 99 ~~---~~Gt~~yH~H~~~~~----~g~liV~d~~ 125 (127)
++ ++|+||||||+..|. .|.++|++++
T Consensus 234 ~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~ 267 (276)
T 3kw8_A 234 AGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 267 (276)
T ss_dssp TTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred eccCCCCCeEEEECCCchHhhCCCeEEEEEeCCC
Confidence 97 699999999986664 9999998765
No 38
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=99.74 E-value=1.1e-18 Score=153.64 Aligned_cols=96 Identities=19% Similarity=0.179 Sum_probs=86.2
Q ss_pred ceEEEEEECCCCCC--CeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeec-CCCCCCCcccceeeeCCCCEEEEEEeCC
Q psy16567 24 FERAILSINRQLPG--PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKV-TPWMDGVPMVTQCPIPSSTTFRYKFPAM 100 (127)
Q Consensus 24 ~~~~~~~~ng~~pg--P~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~-~~~~DG~~~~~~~~i~PG~~~~y~~~~~ 100 (127)
....+.++||++|| |.|++.+||+|+|+|.|... .+||||+++.. ..++||++..+ ++|.||.+++|+|.++
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~g~----~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSAGN----EADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWPD 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECCCS----TTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECCC
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcCCC----cceEEeeEEeCCceeecCeecce-EeecCCceEEEEEecC
Confidence 56789999999998 78999999999999998654 49999998877 77899998877 9999999999999999
Q ss_pred CceeeEEccCCCCCc----eeeEEEEcC
Q psy16567 101 PSGTFFYHSHVDRRP----YCPEIEEKK 124 (127)
Q Consensus 101 ~~Gt~~yH~H~~~~~----~g~liV~d~ 124 (127)
++||||||||+..|+ .|+++|+++
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~ 718 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQC 718 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECC
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCC
Confidence 999999999997765 999999765
No 39
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=99.73 E-value=5.2e-18 Score=136.42 Aligned_cols=85 Identities=14% Similarity=0.108 Sum_probs=73.8
Q ss_pred EEEECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCceeeEE
Q psy16567 28 ILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFY 107 (127)
Q Consensus 28 ~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~~y 107 (127)
+.++||++ +|+|+|++||+|+|+|+|.+. ..|++||||... .++++|.||++++|.|+++++|+|||
T Consensus 46 ~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~-~~h~~~~~g~~~-----------~~~~~i~pG~~~~~~f~~~~~Gt~~y 112 (447)
T 2dv6_A 46 GGDIDHKI-NPTLVVHEGETVQVNLVNGEG-AQHDVVVDQYAA-----------RSAIVNGKNASSTFSFVASKVGEFNY 112 (447)
T ss_dssp SGGGTTCB-SCCEEEETTCEEEEEEECSSS-SCBCCEETTTTE-----------ECCCBCSTTBEEEEEEECCSCEEEEE
T ss_pred ceeecCCc-CCeEEEcCCCEEEEEEEcCCC-CceEEEEccCCc-----------ccceecCCCCeEEEEEEcCCCEEEEE
Confidence 45679999 999999999999999999998 669999998642 13567999999999999999999999
Q ss_pred ccCCCCCc----eeeEEEEcCC
Q psy16567 108 HSHVDRRP----YCPEIEEKKK 125 (127)
Q Consensus 108 H~H~~~~~----~g~liV~d~~ 125 (127)
|||...|. +|+|+|+++.
T Consensus 113 ~~~~~~h~~~Gm~G~i~V~~~~ 134 (447)
T 2dv6_A 113 YCSIAGHRQAGMEGNIQVLPGN 134 (447)
T ss_dssp ECCSTTHHHHTCEEEEEEESSC
T ss_pred EeCCCChhhCCCEEEEEEeCCc
Confidence 99987764 8999998765
No 40
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.72 E-value=5.5e-18 Score=111.45 Aligned_cols=86 Identities=17% Similarity=0.234 Sum_probs=65.9
Q ss_pred CCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCC--CCCCCcccceeeeCCCCEEEEEEeC-CCceeeEEccC
Q psy16567 34 QLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTP--WMDGVPMVTQCPIPSSTTFRYKFPA-MPSGTFFYHSH 110 (127)
Q Consensus 34 ~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~--~~DG~~~~~~~~i~PG~~~~y~~~~-~~~Gt~~yH~H 110 (127)
+|++|.|++++||+|+ |.|.+. .+|++|+||...+... ..|+.+ ..+..+.||++++|.|++ +++|+||||||
T Consensus 15 ~f~p~~i~v~~Gd~V~--~~N~~~-~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T 3cvb_A 15 QFEPANVTVHPGDTVK--WVNNKL-PPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCA 90 (105)
T ss_dssp CEESSEEEECTTEEEE--EEECSS-CCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECT
T ss_pred EEeCCEEEEcCCCEEE--EEECCC-CCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeC
Confidence 5678999999999986 579887 8999999998654210 012111 234578999999999999 79999999999
Q ss_pred CCCC--ceeeEEEEc
Q psy16567 111 VDRR--PYCPEIEEK 123 (127)
Q Consensus 111 ~~~~--~~g~liV~d 123 (127)
.... +.|.|+|+|
T Consensus 91 ~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 PHRGAGMVGKITVEG 105 (105)
T ss_dssp TTGGGTCEEEEEECC
T ss_pred CchhcCCEEEEEEcC
Confidence 5443 599999975
No 41
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.67 E-value=7.8e-16 Score=102.77 Aligned_cols=92 Identities=21% Similarity=0.147 Sum_probs=73.7
Q ss_pred EeecCCceEEEE-EECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEE
Q psy16567 18 CVTADGFERAIL-SINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYK 96 (127)
Q Consensus 18 ~v~~~G~~~~~~-~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~ 96 (127)
....+|.....+ .+|.+++++.|++++||+|+++++|... . +|++.... .|. ...+.||++++|.
T Consensus 17 ~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~-~-----~H~~~i~~----~~~----~~~i~pG~~~~~~ 82 (112)
T 1iby_A 17 ELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSP-I-----SEGFSIDA----FGV----QEVIKAGETKTIS 82 (112)
T ss_dssp EEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSS-S-----CEEEEEGG----GTE----EEEECTTCEEEEE
T ss_pred cEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCC-C-----eEEEEEcC----CCc----eeEeCCCCEEEEE
Confidence 345667666664 8888888899999999999999999976 4 56665532 122 3358999999999
Q ss_pred EeCCCceeeEEccCCCCC---ceeeEEEEc
Q psy16567 97 FPAMPSGTFFYHSHVDRR---PYCPEIEEK 123 (127)
Q Consensus 97 ~~~~~~Gt~~yH~H~~~~---~~g~liV~d 123 (127)
|+++++|+|+||||...+ +.|.|+|+|
T Consensus 83 f~~~~~G~y~~~C~~~~~~~~M~g~i~V~~ 112 (112)
T 1iby_A 83 FTADKAGAFTIWCQLHPKNIHLPGTLNVVE 112 (112)
T ss_dssp EECCSCEEEEEBCSSSCTTTBCCEEEEEEC
T ss_pred EECCCCEEEEEECCCCCchHHCEEEEEEeC
Confidence 999999999999988665 799999975
No 42
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.67 E-value=2.5e-16 Score=123.82 Aligned_cols=94 Identities=21% Similarity=0.353 Sum_probs=75.9
Q ss_pred EEECCCC--CCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCc--------ccceeeeCCCCEEEEEEe
Q psy16567 29 LSINRQL--PGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVP--------MVTQCPIPSSTTFRYKFP 98 (127)
Q Consensus 29 ~~~ng~~--pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~--------~~~~~~i~PG~~~~y~~~ 98 (127)
|+|||+. ..|.|++++||+|+|+|.|... ..|+||+||..+... .+|.. ......|.||+++++.|+
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~g~-~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~ 274 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQII 274 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEE
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcCCc-cccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEE
Confidence 7899986 3688999999999999999998 899999999876542 23321 123446899999999999
Q ss_pred C---CCceeeEEccCCCCCc----eeeEEEEcCC
Q psy16567 99 A---MPSGTFFYHSHVDRRP----YCPEIEEKKK 125 (127)
Q Consensus 99 ~---~~~Gt~~yH~H~~~~~----~g~liV~d~~ 125 (127)
+ +++|+|+||||...+. .|.++|++++
T Consensus 275 ~~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~ 308 (343)
T 3cg8_A 275 AGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 308 (343)
T ss_dssp TTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred ECCCCCCeeEEEeCCCHHHHhccCcEEEEEecCC
Confidence 5 7899999999986664 8899997543
No 43
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.62 E-value=4e-15 Score=124.26 Aligned_cols=93 Identities=22% Similarity=0.203 Sum_probs=73.4
Q ss_pred CCceEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCC
Q psy16567 22 DGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMP 101 (127)
Q Consensus 22 ~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~ 101 (127)
++.+..+|++|+++++|.|++++||+|+++++|....... +||+.... .|. ...+.||++++|.|++++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv---~Hgf~ip~----~gv----~~~i~PG~t~t~~Fta~~ 565 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL---THGFTMGN----YGV----AMEIGPQMTSSVTFVAAN 565 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC---CEEEEETT----TTE----EEEECTTCEEEEEEECCS
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc---eeeEEecC----CCc----ceeeCCCCeEEEEEECCC
Confidence 4578899999999999999999999999999997641111 36665432 222 135899999999999999
Q ss_pred ceeeEEccC-----CCCCceeeEEEEcCC
Q psy16567 102 SGTFFYHSH-----VDRRPYCPEIEEKKK 125 (127)
Q Consensus 102 ~Gt~~yH~H-----~~~~~~g~liV~d~~ 125 (127)
+|+|||||| .+..+.|.|+|++++
T Consensus 566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 999999999 344569999998764
No 44
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.56 E-value=1e-14 Score=119.28 Aligned_cols=95 Identities=16% Similarity=0.132 Sum_probs=75.7
Q ss_pred EEEECCCCCC---CeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCC-CCCc-------ccceeeeCCCCEEEEE
Q psy16567 28 ILSINRQLPG---PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWM-DGVP-------MVTQCPIPSSTTFRYK 96 (127)
Q Consensus 28 ~~~~ng~~pg---P~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~-DG~~-------~~~~~~i~PG~~~~y~ 96 (127)
.|++||+..+ |.+++++|++++++|.|... +.|+||+||..+...... +|.+ ......|.||++.+.+
T Consensus 372 ~~~iNG~~~~~~~~~~~~~~G~~v~w~l~N~~~-~~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~ 450 (481)
T 3zx1_A 372 MFLINRKSYDLKRIDLSSKLGVVEDWIVINKSH-MDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLR 450 (481)
T ss_dssp TEEETTBCCCTTCCCEEEETTCCEEEEEEECSS-SCEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEE
T ss_pred eeEECCEeCCCCCceEEeCCCCEEEEEEEcCCC-CceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEE
Confidence 3999999775 67999999999999999877 899999999876542210 3321 1223458999999999
Q ss_pred EeCCCceeeEEccCCCCCc----eeeEEEEc
Q psy16567 97 FPAMPSGTFFYHSHVDRRP----YCPEIEEK 123 (127)
Q Consensus 97 ~~~~~~Gt~~yH~H~~~~~----~g~liV~d 123 (127)
|.++.+|.|+||||...|. .+.+.|++
T Consensus 451 ~~~d~pG~w~~HCHil~H~d~GMm~~~~V~~ 481 (481)
T 3zx1_A 451 MKQDFKGLRMYHCHILEHEDLGMMGNLEVKE 481 (481)
T ss_dssp ECCCSCEEEEEEESSHHHHHTTCEEEEEEEC
T ss_pred EEcCCCeeEEEEcCChHHHhcCCceEEEEeC
Confidence 9999999999999986664 88888863
No 45
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.53 E-value=3.8e-14 Score=109.91 Aligned_cols=95 Identities=20% Similarity=0.267 Sum_probs=75.1
Q ss_pred EEECCCCC--CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcc-------cceeeeCCCCEEEEEEeC
Q psy16567 29 LSINRQLP--GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM-------VTQCPIPSSTTFRYKFPA 99 (127)
Q Consensus 29 ~~~ng~~p--gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~-------~~~~~i~PG~~~~y~~~~ 99 (127)
|++|++.. .|.|.++.||+|+++|.|..+ +.+++|+||..+... +.|+... .....|.||+++++.+.+
T Consensus 163 ~t~Ng~~~~~~~~l~v~~Ge~vr~~liN~g~-~~hpfHlHGh~F~v~-~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a 240 (313)
T 3tas_A 163 MTINNRPAHTGPDFEATVGDRVEFVMITHGE-YYHTFHLHGHRWADN-RTGMLTGPDDPSQVIDNKICGPADSFGFQVIA 240 (313)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCEESS-TTSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred hhcccCCcccccccccccCCEEEEEEecccc-cceeeeecCCeeEEE-EECCccCCCCCCeeeeEEEeCCCcceEEEEEe
Confidence 67888743 478999999999999999987 899999999877543 2444221 223458999999999987
Q ss_pred C---CceeeEEccCCCCCc----eeeEEEEcCC
Q psy16567 100 M---PSGTFFYHSHVDRRP----YCPEIEEKKK 125 (127)
Q Consensus 100 ~---~~Gt~~yH~H~~~~~----~g~liV~d~~ 125 (127)
. +||+|+||||+..+. .|.++|++++
T Consensus 241 ~~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d 273 (313)
T 3tas_A 241 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 273 (313)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred ccCCCCEeEEEEeCChHHHHCCCeEEEEEECCC
Confidence 4 689999999986665 8889998764
No 46
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.52 E-value=6e-14 Score=108.32 Aligned_cols=96 Identities=17% Similarity=0.212 Sum_probs=74.0
Q ss_pred EEEECCCCC--CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCc-------ccceeeeCCCCEEEEEEe
Q psy16567 28 ILSINRQLP--GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVP-------MVTQCPIPSSTTFRYKFP 98 (127)
Q Consensus 28 ~~~~ng~~p--gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~-------~~~~~~i~PG~~~~y~~~ 98 (127)
.|.+|++.. .|.|.++.||+|+++|.|..+ ..++||+||..+.... .++.. ......|.||+++++.+.
T Consensus 178 ~~~~Ng~~~~~~p~l~v~~Ge~Vr~~liN~~~-~~HpfHlHGh~F~v~~-~g~~~~~~~~~~~~Dtv~v~PGe~~~~~vi 255 (299)
T 3t9w_A 178 DMMINNRAHHDAPTFEANLGERVEWIAIGHGS-NFHTFHLHGHRWLDNR-TGMRTSEYDPSPLIDIKDLNPGVSFGFQVI 255 (299)
T ss_dssp TTEETTCCTTCCCEEEEETTCEEEEEEEEESS-CCCEEEETTCCEESSS-SSSCCSTTCCCCEESEEECCTTCEEEEEEE
T ss_pred eeeecCccccccccceecCCCEEEEEEEeccc-cceeeeEecceEEEEe-cccccCCcCCCCceeeEEeCCceeEEEEEE
Confidence 367898754 488999999999999999998 8899999998765322 22211 122335899999999987
Q ss_pred C---CCceeeEEccCCCCCc----eeeEEEEcCC
Q psy16567 99 A---MPSGTFFYHSHVDRRP----YCPEIEEKKK 125 (127)
Q Consensus 99 ~---~~~Gt~~yH~H~~~~~----~g~liV~d~~ 125 (127)
+ ++||+|+||||+..+. .|.+.|++++
T Consensus 256 a~~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~ 289 (299)
T 3t9w_A 256 AGEGVGPGMWMYHCHVQNHSDMGMAGMFLVRNAD 289 (299)
T ss_dssp TTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred EeeCCCCeeEEEEcCCHHHHhcCCeEEEEEECCC
Confidence 6 4699999999997665 8888998654
No 47
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.51 E-value=6.5e-14 Score=117.56 Aligned_cols=98 Identities=12% Similarity=0.139 Sum_probs=79.9
Q ss_pred eEEEEEECCCC-CCCeEEEecCCEEEEEEEcCCCC-CceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCc
Q psy16567 25 ERAILSINRQL-PGPSIQVCKGDTIIVDVKNHMID-REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPS 102 (127)
Q Consensus 25 ~~~~~~~ng~~-pgP~i~v~~Gd~v~v~~~N~~~~-~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~ 102 (127)
...++++||+. +.|.|++++|++|+++|.|.... ..|++|+||+.+.... .|+. ......|.||+++++.|.++++
T Consensus 225 ~~~~~~iNG~~~~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~-~d~~-~~d~v~l~pg~r~~v~~~~~~p 302 (647)
T 1sdd_B 225 SHEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENG-TQQH-QLGVWPLLPGSFKTLEMKASKP 302 (647)
T ss_dssp CCEEEEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECS-SSCE-EESSEEECTTEEEEEEEECCSS
T ss_pred cCceeccCCEecCCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEec-CCCc-ccceEEECCCeEEEEEEEeccc
Confidence 35679999987 46899999999999999998753 3799999998876543 5654 2344568999999999999999
Q ss_pred eeeEEccCCCCCc----eeeEEEEcC
Q psy16567 103 GTFFYHSHVDRRP----YCPEIEEKK 124 (127)
Q Consensus 103 Gt~~yH~H~~~~~----~g~liV~d~ 124 (127)
|+|+||||...+. .+.++|.++
T Consensus 303 G~w~~hch~~~h~~~Gm~~~~~V~~~ 328 (647)
T 1sdd_B 303 GWWLLDTEVGEIQRAGMQTPFLIVDR 328 (647)
T ss_dssp EEEEEECCCHHHHTTTCEEEEEEECT
T ss_pred eEeecccCcccccccccccceeeecc
Confidence 9999999985554 888888643
No 48
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.50 E-value=4.8e-14 Score=108.15 Aligned_cols=98 Identities=13% Similarity=0.083 Sum_probs=75.3
Q ss_pred CceEEEEEECCCCCC---CeEEEecCCEEEEEEEcCCCC-CceEEEEeeeeeecCCCCCCCc-----ccceeeeCCCCEE
Q psy16567 23 GFERAILSINRQLPG---PSIQVCKGDTIIVDVKNHMID-REVTLHWHGVYQKVTPWMDGVP-----MVTQCPIPSSTTF 93 (127)
Q Consensus 23 G~~~~~~~~ng~~pg---P~i~v~~Gd~v~v~~~N~~~~-~~~siH~HG~~~~~~~~~DG~~-----~~~~~~i~PG~~~ 93 (127)
|....+|++||+..+ +.|.++.|++|++++.|.... ..|++|+||..+... .+|.. ......|.||++.
T Consensus 177 g~~~~~~~iNG~~~~~~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~--~~g~~~~~~~~~Dtv~v~pg~~~ 254 (288)
T 3gdc_A 177 GDDNEFYSVNGLPFHFMDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYY--PTGTMLTPSEYTDTISQVQGQRG 254 (288)
T ss_dssp TTCCSEEEETTSTTHHHHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEE--ETTCCSSCSEEESEEEEETTCEE
T ss_pred CCCcceEEECcccccccCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEE--cCCCccCCCceeeEEEeCCCceE
Confidence 444568999998653 469999999999999998751 359999999876542 23321 1233357899999
Q ss_pred EEEEeCCCceeeEEccCCCCCc----eeeEEEE
Q psy16567 94 RYKFPAMPSGTFFYHSHVDRRP----YCPEIEE 122 (127)
Q Consensus 94 ~y~~~~~~~Gt~~yH~H~~~~~----~g~liV~ 122 (127)
+..|.+++||+|+||||...+. .|.+.|.
T Consensus 255 ~v~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~ 287 (288)
T 3gdc_A 255 ILELRFPYPGKFMFHAHKTEFAELGWMGFFEVS 287 (288)
T ss_dssp EEEECCCSCEEEEEECSSHHHHTTTCEEEEEEE
T ss_pred EEEEECCCCEEEEEEecChHHHhcCCCEEEEEe
Confidence 9999999999999999986654 7777774
No 49
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.50 E-value=7.8e-14 Score=98.57 Aligned_cols=101 Identities=16% Similarity=0.247 Sum_probs=65.3
Q ss_pred EeecCCceEEEEEEC-C-CC----------CCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCC---ccc
Q psy16567 18 CVTADGFERAILSIN-R-QL----------PGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGV---PMV 82 (127)
Q Consensus 18 ~v~~~G~~~~~~~~n-g-~~----------pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~---~~~ 82 (127)
.|..+|.+.++.... - .+ ++|.|++++||+|+|+++|...... |.+.+......+.+.. ..+
T Consensus 29 ~v~~~~~~v~v~~~~~~~~~~~~~~~~~g~~~p~i~V~~GD~V~~~~tN~~~~~~---H~~~i~~~~~~~~~~~~~~~~~ 105 (154)
T 2cal_A 29 TVTYSGKTVHVVAAAVLPGFPFPSFEVHDKKNPTLEIPAGATVDVTFINTNKGFG---HSFDITKKGPPYAVMPVIDPIV 105 (154)
T ss_dssp EEECCSSEEEEEEEESCTTSCSSCEEETTEESCEEEECTTCEEEEEEEECCTTCC---CCCEEESCCSCCCSSCCCCSEE
T ss_pred eEEecCCEEEEEEEEcccCCccccccccCCCCCEEEEeCCCEEEEEEEcCCCCee---eEEEEeecCcchhccccccccc
Confidence 677888666543321 1 11 3489999999999999999742133 3333332111111100 000
Q ss_pred c----eeeeCCCC--EEEEEEeCCCceeeEEccCCCCCc----eeeEEEE
Q psy16567 83 T----QCPIPSST--TFRYKFPAMPSGTFFYHSHVDRRP----YCPEIEE 122 (127)
Q Consensus 83 ~----~~~i~PG~--~~~y~~~~~~~Gt~~yH~H~~~~~----~g~liV~ 122 (127)
. ...|.||+ +.+|.|++ ++|+||||||..+|. .|.|+|+
T Consensus 106 ~~~~~~~~i~PG~sgt~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 106 AGTGFSPVPKDGKFGYTDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEBCCCCCCBTTBEEEEEEEECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred cccccccccCCCCceEEEEEEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 0 01578999 99999999 999999999986664 9999984
No 50
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.47 E-value=9.6e-14 Score=116.40 Aligned_cols=97 Identities=15% Similarity=0.098 Sum_probs=74.5
Q ss_pred EEEEEECCCCC--CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCC-----------CCCC-------------
Q psy16567 26 RAILSINRQLP--GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPW-----------MDGV------------- 79 (127)
Q Consensus 26 ~~~~~~ng~~p--gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~-----------~DG~------------- 79 (127)
...|++||+.. .+.+++++|++++++|.|... +.|+||+||..+..... .+|.
T Consensus 458 ~~~~~iNG~~~~~~~~~~v~~G~~v~w~l~N~~~-~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~ 536 (612)
T 2g23_A 458 TKTYRRTAATFNDGLGFTIGEGTHEQWTFLNLSP-ILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVP 536 (612)
T ss_dssp EEEEEEEECSTTSCCCEEEETTCEEEEEEEECSS-SCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECC
T ss_pred eeEEEECCccCCCCCceEecCCCEEEEEEEeCCC-CCCCeEEcCceEEEecccCcccccccccccCcccccccccccccC
Confidence 45799999743 578999999999999999987 89999999987653210 0110
Q ss_pred ------cccceeeeCCCCEEEEEEeCC-CceeeEEccCCCCCc----eeeEEEEc
Q psy16567 80 ------PMVTQCPIPSSTTFRYKFPAM-PSGTFFYHSHVDRRP----YCPEIEEK 123 (127)
Q Consensus 80 ------~~~~~~~i~PG~~~~y~~~~~-~~Gt~~yH~H~~~~~----~g~liV~d 123 (127)
.......|.||++.+++|.++ .+|.|+||||+..|. .+.+.|.+
T Consensus 537 ~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~V~p 591 (612)
T 2g23_A 537 LAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMP 591 (612)
T ss_dssp CCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEEEEEC
T ss_pred CCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCceEEEECc
Confidence 011223478999999999998 999999999986554 88888864
No 51
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.47 E-value=1.1e-13 Score=107.61 Aligned_cols=88 Identities=23% Similarity=0.288 Sum_probs=72.2
Q ss_pred EEEEEECCCCCC--CeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcc-----cceeeeCCCCEEEEEEe
Q psy16567 26 RAILSINRQLPG--PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM-----VTQCPIPSSTTFRYKFP 98 (127)
Q Consensus 26 ~~~~~~ng~~pg--P~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~-----~~~~~i~PG~~~~y~~~ 98 (127)
...|++||+... +.|++++|++++++|.|... ..+++|+||+.+.... .||.+. .....|.||++.+..|.
T Consensus 164 ~d~~~ING~~~~~~~~l~v~~G~~vrlrliN~~~-~~h~~hlhGh~f~vi~-~dG~~~~~p~~~dtv~l~pger~~v~~~ 241 (318)
T 3g5w_A 164 FDYYTINAKSFPETQPIRVKKGDVIRLRLIGAGD-HVHAIHTHGHISQIAF-KDGFPLDKPIKGDTVLIGPGERYDVILN 241 (318)
T ss_dssp CCEEEETTBCBTSSCCEEECTTCEEEEEEEECSS-SCEEEEETTSCEEEEE-ETTEEEEEEEEESEEEECTTCEEEEEEE
T ss_pred CcEEEEcCcCCCCCccEEeCCCCEEEEEEEeCCC-ceEEEEECCcEEEEEe-cCCcccCCCccccEEEECCCCEEEEEEE
Confidence 467999998532 45999999999999999988 7899999998776543 677532 23345899999999999
Q ss_pred CCCceeeEEccCCCCCc
Q psy16567 99 AMPSGTFFYHSHVDRRP 115 (127)
Q Consensus 99 ~~~~Gt~~yH~H~~~~~ 115 (127)
++++|.|+||||...|.
T Consensus 242 a~~pG~w~~hCH~~~H~ 258 (318)
T 3g5w_A 242 MDNPGLWMIHDHVDTHT 258 (318)
T ss_dssp CCSCSEEEEEESSGGGS
T ss_pred CCCCeeEEEEeccHHHh
Confidence 99999999999986653
No 52
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.46 E-value=5.2e-13 Score=88.27 Aligned_cols=80 Identities=18% Similarity=0.214 Sum_probs=61.6
Q ss_pred ECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCceeeEEccC
Q psy16567 31 INRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSH 110 (127)
Q Consensus 31 ~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H 110 (127)
-+..|..+.|++++||+|++ .|... ..|++|+++. .||........+.||++++|.| +++|+|+|||+
T Consensus 26 ~~~~F~P~~i~v~~Gd~V~~--~N~d~-~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf--~~~G~y~y~C~ 93 (105)
T 2ov0_A 26 AKMKYETPELHVKVGDTVTW--INREA-MPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF--TEAGTYDYHCT 93 (105)
T ss_dssp ETTEESSSEEEECTTCEEEE--EECSS-SCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE--CSCEEEEEECS
T ss_pred eecEEcCCEEEECCCCEEEE--EECCC-CCEEEEEcCC-------CCCcccccccccCCCCEEEEEe--CCCEEEEEEeC
Confidence 34556678999999999765 58876 7888888752 2444323333588999999888 69999999999
Q ss_pred CCCCceeeEEEE
Q psy16567 111 VDRRPYCPEIEE 122 (127)
Q Consensus 111 ~~~~~~g~liV~ 122 (127)
....+.|.|+|+
T Consensus 94 ~H~gM~G~i~V~ 105 (105)
T 2ov0_A 94 PHPFMRGKVVVE 105 (105)
T ss_dssp SCTTCEEEEEEC
T ss_pred CCCCCEEEEEEC
Confidence 877789999985
No 53
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.45 E-value=3.4e-13 Score=108.69 Aligned_cols=86 Identities=16% Similarity=0.155 Sum_probs=68.6
Q ss_pred EEEECCCCC---CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCC-----cccceeeeCCCCEEEEEEeC
Q psy16567 28 ILSINRQLP---GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGV-----PMVTQCPIPSSTTFRYKFPA 99 (127)
Q Consensus 28 ~~~~ng~~p---gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~-----~~~~~~~i~PG~~~~y~~~~ 99 (127)
.|++||+.. .+.+.++.|++++++|.|... +.|+||+||+.+.... .+|. +......|.||+..+.+|.+
T Consensus 335 ~~~iNg~~~~~~~~~~~~~~g~~~~~~~~N~~~-~~HP~HLHG~~F~Vl~-~~g~~~~~p~~rDTv~v~p~~~v~i~f~a 412 (439)
T 2xu9_A 335 RFFINGQVFDHRRVDLKGQAQTVEVWEVENQGD-MDHPFHLHVHPFQVLS-VGGRPFPYRAWKDVVNLKAGEVARLLVPL 412 (439)
T ss_dssp EEEETTBCCCTTCCCEEECTTCEEEEEEEECSS-SCEEEEESSCCBEEEE-ETTEECSSCCCBSEEEECTTCEEEEEEEC
T ss_pred eEeECCEECCCCCCceecCCCCEEEEEEEcCCC-CCCCceeCCCcEEEEe-eCCCCCCCCCCeEEEEeCCCCEEEEEEEc
Confidence 589999753 245999999999999999987 8999999998765432 2331 11233458899999999999
Q ss_pred CCceeeEEccCCCCCc
Q psy16567 100 MPSGTFFYHSHVDRRP 115 (127)
Q Consensus 100 ~~~Gt~~yH~H~~~~~ 115 (127)
+++|.|+||||+..|.
T Consensus 413 dnpG~w~~HCHil~H~ 428 (439)
T 2xu9_A 413 REKGRTVFHCHIVEHE 428 (439)
T ss_dssp CSCEEEEEEESSHHHH
T ss_pred CCCCCEEEECCcchhh
Confidence 9999999999997765
No 54
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.44 E-value=3.3e-13 Score=110.62 Aligned_cols=85 Identities=18% Similarity=0.221 Sum_probs=63.6
Q ss_pred CeEEEecCCEEEEEEE-cCCCCCceEEEEeeeeeecCCCCCCCc--------ccceeeeCC-CCEEEEEEeCCCceeeEE
Q psy16567 38 PSIQVCKGDTIIVDVK-NHMIDREVTLHWHGVYQKVTPWMDGVP--------MVTQCPIPS-STTFRYKFPAMPSGTFFY 107 (127)
Q Consensus 38 P~i~v~~Gd~v~v~~~-N~~~~~~~siH~HG~~~~~~~~~DG~~--------~~~~~~i~P-G~~~~y~~~~~~~Gt~~y 107 (127)
++++++.|+.|+|.|. |... ..|+||+||+.+.... .+|.. ......|.| |+...++|.+++||.|+|
T Consensus 374 ~v~~~~~g~~V~ivl~~n~~~-~~HP~HLHGh~F~vl~-~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~ 451 (495)
T 3t6v_A 374 SVISLPSNSTIEIALPAGAAG-GPHPFHLHGHDFAVSE-SASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFL 451 (495)
T ss_dssp SEEEECTTCEEEEEEECCSSS-CCCEEEETTCCEEEEE-CTTCCCCCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEE
T ss_pred ceEEecCCCEEEEEEccCCCC-CCcceeecCCcEEEEe-cCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEE
Confidence 4689999999999998 5555 8999999998765332 22221 112224665 899999999999999999
Q ss_pred ccCCCCCc---eeeEEEEcC
Q psy16567 108 HSHVDRRP---YCPEIEEKK 124 (127)
Q Consensus 108 H~H~~~~~---~g~liV~d~ 124 (127)
|||+..|. ....++|+|
T Consensus 452 HCHi~~H~~~Gm~~~~~e~~ 471 (495)
T 3t6v_A 452 HCHIDWHLDAGFAIVFAEDI 471 (495)
T ss_dssp EESCHHHHHTTCEEEEEETH
T ss_pred EecchhHhhcCCeEEEEECh
Confidence 99997776 555666654
No 55
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.44 E-value=3.3e-13 Score=110.74 Aligned_cols=87 Identities=16% Similarity=0.240 Sum_probs=64.4
Q ss_pred CCeEEEecCCEEEEEEE---cCCCCCceEEEEeeeeeecCCCCCCCc--------ccceeeeCC---CCEEEEEEeCCCc
Q psy16567 37 GPSIQVCKGDTIIVDVK---NHMIDREVTLHWHGVYQKVTPWMDGVP--------MVTQCPIPS---STTFRYKFPAMPS 102 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~---N~~~~~~~siH~HG~~~~~~~~~DG~~--------~~~~~~i~P---G~~~~y~~~~~~~ 102 (127)
+++++++.|+.|+|.|. |... ..|+||+||+.+.... .+|.. ......|.| |+...++|.+++|
T Consensus 369 ~~v~~~~~g~~V~ivl~~~~n~~~-~~HP~HLHGh~F~Vl~-~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnP 446 (499)
T 3pxl_A 369 GSVYVLPSNASIEISFPATAAAPG-APHPFHLHGHTFAVVR-SAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNP 446 (499)
T ss_dssp TSEEEECTTCEEEEEEECCTTSCS-CSCEEEETTCCEEEEE-CTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSC
T ss_pred ceeEEecCCCEEEEEEecCcccCC-CCccceecCCcEEEEe-ccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcCCC
Confidence 35689999999999999 5555 7899999998764322 22211 112223554 9999999999999
Q ss_pred eeeEEccCCCCCc---eeeEEEEcCC
Q psy16567 103 GTFFYHSHVDRRP---YCPEIEEKKK 125 (127)
Q Consensus 103 Gt~~yH~H~~~~~---~g~liV~d~~ 125 (127)
|.|+||||+..|. ....++|+|+
T Consensus 447 G~W~~HCHi~~H~~~Gm~~~~~e~~~ 472 (499)
T 3pxl_A 447 GPWFLHCHIDFHLEGGFAVVMAEDTP 472 (499)
T ss_dssp EEEEEEESSHHHHHTTCEEEEEESGG
T ss_pred ceEEEEeCChhHhhCCCcEEEEEChh
Confidence 9999999998776 5666777653
No 56
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.43 E-value=6e-15 Score=114.06 Aligned_cols=94 Identities=17% Similarity=0.234 Sum_probs=60.3
Q ss_pred EEEEEECCCCCC--CeEEEecCCEEEEEEEcCCCC-CceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCc
Q psy16567 26 RAILSINRQLPG--PSIQVCKGDTIIVDVKNHMID-REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPS 102 (127)
Q Consensus 26 ~~~~~~ng~~pg--P~i~v~~Gd~v~v~~~N~~~~-~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~ 102 (127)
..++++||+..+ |.|++++|++++++|.|.... ..+++|+||..+. .||.. .....|.||+++++.|+++++
T Consensus 201 ~~~~~ING~~~~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~----~dG~~-~dtv~l~pger~~v~~~~~~p 275 (306)
T 1sdd_A 201 SLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLE----QNHHK-ISAITLVSATSTTANMTVSPE 275 (306)
T ss_dssp CEEECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCE----ETTEE-CSCCCEETTCCBC--------
T ss_pred CcceeeCCEecCCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEee----eCCEE-cceEEECCCcEEEEEEEcCCC
Confidence 467999999764 889999999999999999863 3688999997653 36643 344568999999999999999
Q ss_pred eeeEEccCCCCCc----eeeEEEEcC
Q psy16567 103 GTFFYHSHVDRRP----YCPEIEEKK 124 (127)
Q Consensus 103 Gt~~yH~H~~~~~----~g~liV~d~ 124 (127)
|+|+||||...+. .|.+.|++.
T Consensus 276 G~~~~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 276 GRWTIASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred eEEEEEeCChHHHhcCCeEEEEEecC
Confidence 9999999998775 777788653
No 57
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.43 E-value=6e-13 Score=108.99 Aligned_cols=84 Identities=14% Similarity=0.236 Sum_probs=63.4
Q ss_pred CeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCc--------ccceeee-CCCCEEEEEEeCCCceeeEEc
Q psy16567 38 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVP--------MVTQCPI-PSSTTFRYKFPAMPSGTFFYH 108 (127)
Q Consensus 38 P~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~--------~~~~~~i-~PG~~~~y~~~~~~~Gt~~yH 108 (127)
++++++.|++|+|.+.|+...+.|+||+||+.+.... .+|.. ......| .||+..+.+|.+++||.|+||
T Consensus 373 ~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~-~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~H 451 (503)
T 1hfu_A 373 SVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVR-SAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFH 451 (503)
T ss_dssp SEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEE-CTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEE
T ss_pred eEEEccCCCEEEEEEECCCCCCCCCEEEecceEEEEe-cCCCCccccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEe
Confidence 4689999999999999543238999999998876433 22221 1223357 799999999999999999999
Q ss_pred cCCCCCc----eeeEEEE
Q psy16567 109 SHVDRRP----YCPEIEE 122 (127)
Q Consensus 109 ~H~~~~~----~g~liV~ 122 (127)
||+..|. .+.++|.
T Consensus 452 CHil~H~~~GM~~~~~v~ 469 (503)
T 1hfu_A 452 CHIEFHLMNGLAIVFAED 469 (503)
T ss_dssp ESSHHHHHTTCEEEEEEC
T ss_pred cCchhHhhCCCeEEEEEC
Confidence 9997765 5555553
No 58
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.42 E-value=4.3e-13 Score=110.29 Aligned_cols=81 Identities=19% Similarity=0.275 Sum_probs=62.8
Q ss_pred CeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCc--------ccceeee-CCCCEEEEEEeCCCceeeEEc
Q psy16567 38 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVP--------MVTQCPI-PSSTTFRYKFPAMPSGTFFYH 108 (127)
Q Consensus 38 P~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~--------~~~~~~i-~PG~~~~y~~~~~~~Gt~~yH 108 (127)
++++++.|++|+|.+.| . +.|+||+||+.+.... .+|.. ......| .||+....+|.+++||.|+||
T Consensus 397 ~~~~v~~g~~vei~l~N--~-~~HP~HLHGh~F~Vl~-~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~H 472 (521)
T 1v10_A 397 AVISLPANQVIEISIPG--G-GNHPFHLHGHNFDVVR-TPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLH 472 (521)
T ss_dssp TEEEECTTCEEEEEEEC--C-BSCEEEESSCCEEEEE-CTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEE
T ss_pred eEEEecCCCEEEEEEcC--C-CCCCEEEccceEEEEe-cCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEe
Confidence 46899999999999999 5 7899999998776443 22221 1223357 799999999999999999999
Q ss_pred cCCCCCc----eeeEEEE
Q psy16567 109 SHVDRRP----YCPEIEE 122 (127)
Q Consensus 109 ~H~~~~~----~g~liV~ 122 (127)
||+..|. .+.++|.
T Consensus 473 CHi~~H~~~GM~~~~~v~ 490 (521)
T 1v10_A 473 CHIDWHLEAGLAVVFAED 490 (521)
T ss_dssp ESCHHHHTTTCEEEEEES
T ss_pred eChHHHHhCCCeEEEEEC
Confidence 9996665 5555553
No 59
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.40 E-value=8.4e-13 Score=108.96 Aligned_cols=77 Identities=16% Similarity=0.243 Sum_probs=60.3
Q ss_pred CeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCC-------C---C-------------cccceeeeCCCCEEE
Q psy16567 38 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMD-------G---V-------------PMVTQCPIPSSTTFR 94 (127)
Q Consensus 38 P~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~D-------G---~-------------~~~~~~~i~PG~~~~ 94 (127)
..+.++.|+.|+|+|.|... +.|+||+||+.+....... | . +......|.||+...
T Consensus 370 ~~~~~~~g~~v~ivi~N~~~-~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~ 448 (534)
T 1zpu_A 370 HTFILEKDEIVEIVLNNQDT-GTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFV 448 (534)
T ss_dssp CEEEECTTCEEEEEEEECSS-SCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEE
T ss_pred eEEEeCCCCEEEEEEeCCCC-CCCCeEecCCceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEE
Confidence 35899999999999999987 8999999998765432111 2 0 011223478999999
Q ss_pred EEEeCCCceeeEEccCCCCCc
Q psy16567 95 YKFPAMPSGTFFYHSHVDRRP 115 (127)
Q Consensus 95 y~~~~~~~Gt~~yH~H~~~~~ 115 (127)
.+|.+++||.|+||||+..|.
T Consensus 449 IrF~aDNPG~W~~HCHi~~H~ 469 (534)
T 1zpu_A 449 IRFKADNPGVWFFHCHIEWHL 469 (534)
T ss_dssp EEEECCSCEEEEEEECCHHHH
T ss_pred EEEEeCCCeeEEEEeCchhHh
Confidence 999999999999999997776
No 60
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.38 E-value=4e-12 Score=87.71 Aligned_cols=88 Identities=14% Similarity=0.111 Sum_probs=63.7
Q ss_pred CCCCCeEEEecCCEEEEEEEcCCCCC-ceEEEEeeeeee--------c------CCC-CCCCcc--cceeeeCCCCEEEE
Q psy16567 34 QLPGPSIQVCKGDTIIVDVKNHMIDR-EVTLHWHGVYQK--------V------TPW-MDGVPM--VTQCPIPSSTTFRY 95 (127)
Q Consensus 34 ~~pgP~i~v~~Gd~v~v~~~N~~~~~-~~siH~HG~~~~--------~------~~~-~DG~~~--~~~~~i~PG~~~~y 95 (127)
.|-.+.|++++||+|+|+|+|... . .|.+++++.... . ..+ .++.+. .....|.||+++++
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~-~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v 109 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSA-VQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEV 109 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCS-SCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCC-CCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEE
Confidence 344578999999999999999887 7 899999874310 0 000 011010 11224799999999
Q ss_pred EEeCCCceeeEEccCCCCC---ceeeEEEE
Q psy16567 96 KFPAMPSGTFFYHSHVDRR---PYCPEIEE 122 (127)
Q Consensus 96 ~~~~~~~Gt~~yH~H~~~~---~~g~liV~ 122 (127)
.|+++++|+|+||||+..| +.|.|+|+
T Consensus 110 ~f~~~~pG~y~f~C~~~~H~~GM~G~i~V~ 139 (139)
T 2aan_A 110 TFTAPAAGTYLYICTVPGHYPLMQGKLVVN 139 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTTTSEEEEEEC
T ss_pred EEECCCCeEEEEEcCCCChHHcCEEEEEEC
Confidence 9999999999999998664 58888884
No 61
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.36 E-value=1.8e-12 Score=101.32 Aligned_cols=88 Identities=24% Similarity=0.335 Sum_probs=71.8
Q ss_pred eEEEEEECCCCCC--CeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcc-----cceeeeCCCCEEEEEE
Q psy16567 25 ERAILSINRQLPG--PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM-----VTQCPIPSSTTFRYKF 97 (127)
Q Consensus 25 ~~~~~~~ng~~pg--P~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~-----~~~~~i~PG~~~~y~~ 97 (127)
....|++||+... +.|.+++|++++++|.|... ..++||+||..+.... .||.+. .....|.||+++++.|
T Consensus 164 ~~~~~~ING~~~~~~~~~~v~~G~~vrlrliN~~~-~~h~~hlhGh~f~vi~-~DG~~~~~p~~~dtv~l~pg~r~~v~~ 241 (339)
T 2zwn_A 164 VADYFSVNAKSFPLTQPLRVKKGDVVKIRFFGAGG-GIHAMHSHGHDMLVTH-KDGLPLDSPYYADTVLVSPGERYDVII 241 (339)
T ss_dssp CCCEEEETTBCTTSSCCEEECTTCEEEEEEEECSS-SCEEEEETTCCEEEEE-ETTEEEEEEEEESEEEECTTCEEEEEE
T ss_pred ccceEEEccccCCCcccEEECCCCEEEEEEEeCCC-ceEEEEECCcEEEEEE-eCCeecCCCcEEEEEEECCCCEEEEEE
Confidence 3568999998532 44999999999999999987 7999999998766443 687532 2334578999999999
Q ss_pred eCCCceeeEEccCCCCC
Q psy16567 98 PAMPSGTFFYHSHVDRR 114 (127)
Q Consensus 98 ~~~~~Gt~~yH~H~~~~ 114 (127)
+++++|.|++|||...+
T Consensus 242 ~~~~pG~w~~hch~~~H 258 (339)
T 2zwn_A 242 EADNPGRFIFHDHVDTH 258 (339)
T ss_dssp ECCSCSEEEEEECCGGG
T ss_pred EeCCCeeEEEEEechhh
Confidence 99999999999998664
No 62
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.33 E-value=1.1e-12 Score=108.33 Aligned_cols=96 Identities=17% Similarity=0.032 Sum_probs=71.5
Q ss_pred EEEECCCCCC----C-eEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCC----------cccceeeeCCCCE
Q psy16567 28 ILSINRQLPG----P-SIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGV----------PMVTQCPIPSSTT 92 (127)
Q Consensus 28 ~~~~ng~~pg----P-~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~----------~~~~~~~i~PG~~ 92 (127)
.|++||+... | .+.++.|++++++|.|....+.|+||+||+.+......+|. .......|.||+.
T Consensus 360 ~w~iNG~~f~~~~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~pg~~ 439 (534)
T 3abg_A 360 TWTINGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRET 439 (534)
T ss_dssp TTCCCCBTTBCTTSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCSSEE
T ss_pred eeEECCcccCCCCCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCCCCE
Confidence 4789997532 3 46899999999999998742589999999876544322331 1122334789999
Q ss_pred EEEEEe-CCCceeeEEccCCCCCc----eeeEEEEc
Q psy16567 93 FRYKFP-AMPSGTFFYHSHVDRRP----YCPEIEEK 123 (127)
Q Consensus 93 ~~y~~~-~~~~Gt~~yH~H~~~~~----~g~liV~d 123 (127)
.+.+|. ++++|.|+||||+..|. .+.+.|..
T Consensus 440 v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 475 (534)
T 3abg_A 440 VVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATV 475 (534)
T ss_dssp EEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECS
T ss_pred EEEEEEECCCCccEEEecChHHHHhcCCceEEEEEe
Confidence 999998 89999999999997774 66666654
No 63
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.31 E-value=7e-12 Score=97.59 Aligned_cols=98 Identities=15% Similarity=0.160 Sum_probs=76.9
Q ss_pred EEEEEECCCCCC----CeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcc----cceeeeCCCCEEEEEE
Q psy16567 26 RAILSINRQLPG----PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM----VTQCPIPSSTTFRYKF 97 (127)
Q Consensus 26 ~~~~~~ng~~pg----P~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~----~~~~~i~PG~~~~y~~ 97 (127)
...+++||+... +.|.+++|+++++||.|......+.+|+||+.+... +.||.+. +....|.||++++..|
T Consensus 198 ~~~~~iNG~~~~~~~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi-~~DG~~~~p~~~d~l~l~pGer~dv~v 276 (327)
T 1kbv_A 198 PEYVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKV-YVEGGKLINENVQSTIVPAGGSAIVEF 276 (327)
T ss_dssp CSEEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEE-EGGGSSCEECSBSEEEECTTEEEEEEE
T ss_pred CceEEEcCcccCCCCceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEE-EcCCCcCCCCceeEEEECCCCEEEEEE
Confidence 457899998643 579999999999999998754689999999876543 3677522 3344589999999999
Q ss_pred eCCCceeeEEccCCCCC-----ceeeEEEEcC
Q psy16567 98 PAMPSGTFFYHSHVDRR-----PYCPEIEEKK 124 (127)
Q Consensus 98 ~~~~~Gt~~yH~H~~~~-----~~g~liV~d~ 124 (127)
+++++|.||+|||...+ ..+.|.|+.+
T Consensus 277 ~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~ 308 (327)
T 1kbv_A 277 KVDIPGNYTLVDHSIFRAFNKGALGQLKVEGA 308 (327)
T ss_dssp EECSCEEEEEEESSTHHHHHSSCEEEEEEESC
T ss_pred EeCCCeEEEEEeccccccccCCcEEEEEECCC
Confidence 99999999999998665 2666666643
No 64
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=99.30 E-value=4.2e-12 Score=83.32 Aligned_cols=81 Identities=14% Similarity=0.169 Sum_probs=58.4
Q ss_pred CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCc----ccceeeeCCCCEEEEEEeC-CCceeeEEccCC
Q psy16567 37 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVP----MVTQCPIPSSTTFRYKFPA-MPSGTFFYHSHV 111 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~----~~~~~~i~PG~~~~y~~~~-~~~Gt~~yH~H~ 111 (127)
.+.|++++||+|++ .|... ..|++++|+...+. .+|.. ......+.||+++++.|++ +++|+|||||+.
T Consensus 19 P~~i~v~~Gd~V~~--~n~~~-~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~~ 92 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNNKV-PPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCEP 92 (106)
T ss_dssp SSEEEECTTCEEEE--EECSS-SCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECTT
T ss_pred CCEEEECCCCEEEE--EECCC-CCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeCC
Confidence 47899999999865 58775 78999988754321 12210 0112248999999999988 799999999984
Q ss_pred CC--CceeeEEEEc
Q psy16567 112 DR--RPYCPEIEEK 123 (127)
Q Consensus 112 ~~--~~~g~liV~d 123 (127)
.. .+.|.|+|++
T Consensus 93 H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 93 HRGAGMVGKITVAG 106 (106)
T ss_dssp TGGGTCEEEEEECC
T ss_pred hhhcCcEEEEEEcC
Confidence 33 2599999963
No 65
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.30 E-value=2.7e-12 Score=105.18 Aligned_cols=86 Identities=15% Similarity=0.097 Sum_probs=65.4
Q ss_pred EEEECCCCC---CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcc-------cceeeeCCCCEEEEEE
Q psy16567 28 ILSINRQLP---GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM-------VTQCPIPSSTTFRYKF 97 (127)
Q Consensus 28 ~~~~ng~~p---gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~-------~~~~~i~PG~~~~y~~ 97 (127)
.|+|||+.. .|.+++++|++++++|.|....+.|+||+||..+.... .+|.+. .....|. |++.++.+
T Consensus 379 ~~~ING~~~~~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~-~~g~~~~~~~~~~kDTV~v~-g~~~~i~~ 456 (488)
T 3od3_A 379 ANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILS-ENGKPPAAHRAGWKDTVKVE-GNVSEVLV 456 (488)
T ss_dssp CEEETTBCCCTTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEE-BTTBCCCGGGSSSBSEEEES-SSEEEEEE
T ss_pred eeeECCeeCCCCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEec-cCCCccccccCCceeEEEeC-CCEEEEEE
Confidence 489999863 36799999999999999988437899999998776532 344321 1223467 99999999
Q ss_pred eCC----CceeeEEccCCCCCc
Q psy16567 98 PAM----PSGTFFYHSHVDRRP 115 (127)
Q Consensus 98 ~~~----~~Gt~~yH~H~~~~~ 115 (127)
.++ .+|.|+||||...|.
T Consensus 457 ~f~~~~~~~G~~m~HCH~l~He 478 (488)
T 3od3_A 457 KFNHDAPKEHAYMAHCHLLEHE 478 (488)
T ss_dssp CBCSCCCGGGCEEEEESSHHHH
T ss_pred EeccCCCCCCCEEEeCCchHHH
Confidence 874 468999999986654
No 66
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=99.30 E-value=2.4e-11 Score=79.40 Aligned_cols=84 Identities=11% Similarity=-0.001 Sum_probs=63.1
Q ss_pred eEEEEEECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCcee
Q psy16567 25 ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGT 104 (127)
Q Consensus 25 ~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt 104 (127)
...+-.-|..|-...|+++.||+|+++++|... ..|.+...+... ...+.||++.++.|+++++|+
T Consensus 15 ~v~V~~~~~~F~P~~i~v~~G~tV~~~~~n~d~-~~H~~~~~~~~~-------------~~~~~pg~~~~~~~t~~~~G~ 80 (100)
T 4hci_A 15 VIEVELNDDYFNPNVITIPINESTTLLLKNKGK-SEHTFTIKKLGI-------------DVVVESGKEKNITVKPKSAGT 80 (100)
T ss_dssp CEEEEEETTEEESSEEEECTTSCEEEEEEECSS-SCEEEEEGGGTE-------------EEEECTTCEEEEEECCCSCEE
T ss_pred EEEEEEECCEEeCCEEEECCCCEEEEEEEcCCC-ceEEEEEecCCc-------------ceeecCCcceeEEEecccCce
Confidence 334444456665678999999999999999876 565554433221 124789999999999999999
Q ss_pred eEEccCCC--CCceeeEEEE
Q psy16567 105 FFYHSHVD--RRPYCPEIEE 122 (127)
Q Consensus 105 ~~yH~H~~--~~~~g~liV~ 122 (127)
|.|+|... ..|.|.|+||
T Consensus 81 Y~y~C~~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 81 YELICRYHLLKGMEGKVIVK 100 (100)
T ss_dssp EEEECTTTGGGTCEEEEEEC
T ss_pred EEEECccccCCCCEEEEEEC
Confidence 99999754 3469999996
No 67
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.29 E-value=4.1e-12 Score=104.22 Aligned_cols=96 Identities=18% Similarity=0.112 Sum_probs=71.3
Q ss_pred EEEECCCCC-C-CeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCC---------------CCCc---------c
Q psy16567 28 ILSINRQLP-G-PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWM---------------DGVP---------M 81 (127)
Q Consensus 28 ~~~~ng~~p-g-P~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~---------------DG~~---------~ 81 (127)
.|.+||+.. . +.+.++.|++++++|.|... +.|+||+||+.+...... .|.+ .
T Consensus 385 ~~~iNg~~~~~~~~~~~~~g~~~~w~l~N~~~-~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (513)
T 2wsd_A 385 VLLLNNKRWHDPVTETPKVGTTEIWSIINPTR-GTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGW 463 (513)
T ss_dssp EEEETTBCTTSCCCBCCBTTCEEEEEEEECSS-SCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSC
T ss_pred eEeECCccCCCcccEecCCCCEEEEEEEcCCC-CCcCEeEeCceEEEEEecCcccccccccccccccCCCCCCCccccCc
Confidence 578999854 3 34799999999999999887 899999999875432110 0111 1
Q ss_pred cceeeeCCCCEEEEEEeC-CCceeeEEccCCCCCc----eeeEEEEcC
Q psy16567 82 VTQCPIPSSTTFRYKFPA-MPSGTFFYHSHVDRRP----YCPEIEEKK 124 (127)
Q Consensus 82 ~~~~~i~PG~~~~y~~~~-~~~Gt~~yH~H~~~~~----~g~liV~d~ 124 (127)
.....|.||+..++.+.+ +++|.|+||||+..|. .+.+.|.++
T Consensus 464 rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~~ 511 (513)
T 2wsd_A 464 KDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITDP 511 (513)
T ss_dssp BSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBCC
T ss_pred ccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeCC
Confidence 223357899998888887 7899999999996664 788888654
No 68
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.28 E-value=1.1e-11 Score=102.52 Aligned_cols=99 Identities=15% Similarity=0.102 Sum_probs=72.1
Q ss_pred eEEEEEECCCCC--CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCC----CCC--------------------
Q psy16567 25 ERAILSINRQLP--GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPW----MDG-------------------- 78 (127)
Q Consensus 25 ~~~~~~~ng~~p--gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~----~DG-------------------- 78 (127)
....|.+|++.. ...+.++.|+.++++|.|... +.|+||+||+.+..... .++
T Consensus 457 ~~~~~~~n~~~~~~~~~~~~~~g~~~~w~i~N~~~-~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (612)
T 3gyr_A 457 RTKTYRRTARTFNDGLGFTIGEGTHEQWTFLNLSP-ILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPV 535 (612)
T ss_dssp CEEEEEEEECSTTSCCCEEEETTCEEEEEEEECSS-SCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEEC
T ss_pred ccccccccCccCCCCcceEeCCCCEEEEEEEcCCC-CCcCEeECCCcEEEEeecCCcCcccccccccccccccccccccc
Confidence 456688888754 356899999999999999988 89999999987643210 000
Q ss_pred ------CcccceeeeCCCCEEEEEEe-CCCceeeEEccCCCCCc----eeeEEEEcC
Q psy16567 79 ------VPMVTQCPIPSSTTFRYKFP-AMPSGTFFYHSHVDRRP----YCPEIEEKK 124 (127)
Q Consensus 79 ------~~~~~~~~i~PG~~~~y~~~-~~~~Gt~~yH~H~~~~~----~g~liV~d~ 124 (127)
........|.||+..+.+|. ++++|.|+||||+..|. .+.+.|-+|
T Consensus 536 ~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p 592 (612)
T 3gyr_A 536 PLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPP 592 (612)
T ss_dssp CCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECH
T ss_pred CcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCC
Confidence 00012234789999999998 68999999999997774 666666544
No 69
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.26 E-value=6.7e-12 Score=103.71 Aligned_cols=77 Identities=22% Similarity=0.260 Sum_probs=59.3
Q ss_pred eEEEecCCEEEEEEEcCCC-----CCceEEEEeeeeeecCCCCCCC--------------cccceeeeCCCCEEEEEEeC
Q psy16567 39 SIQVCKGDTIIVDVKNHMI-----DREVTLHWHGVYQKVTPWMDGV--------------PMVTQCPIPSSTTFRYKFPA 99 (127)
Q Consensus 39 ~i~v~~Gd~v~v~~~N~~~-----~~~~siH~HG~~~~~~~~~DG~--------------~~~~~~~i~PG~~~~y~~~~ 99 (127)
+++++.|+.|+|.|.|... ...|+||+||+.+......+|. +......|.||+....+|.+
T Consensus 418 ~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~a 497 (552)
T 1aoz_A 418 VYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVA 497 (552)
T ss_dssp CEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEEC
T ss_pred EEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEc
Confidence 4899999999999999864 1469999999876432211222 11223457899999999999
Q ss_pred CCceeeEEccCCCCCc
Q psy16567 100 MPSGTFFYHSHVDRRP 115 (127)
Q Consensus 100 ~~~Gt~~yH~H~~~~~ 115 (127)
++||.|+||||+..|.
T Consensus 498 DNPG~W~~HCHi~~H~ 513 (552)
T 1aoz_A 498 DNPGVWAFHCHIEPHL 513 (552)
T ss_dssp CSCEEEEEEESSHHHH
T ss_pred CCCeEEEEEeeehhHh
Confidence 9999999999998776
No 70
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.24 E-value=1.6e-11 Score=101.77 Aligned_cols=76 Identities=17% Similarity=0.117 Sum_probs=54.1
Q ss_pred EEEecCCEEEEEEEcCCC----CCceEEEEeeeeeecCCCCC---------CCc---------------ccceeeeCCCC
Q psy16567 40 IQVCKGDTIIVDVKNHMI----DREVTLHWHGVYQKVTPWMD---------GVP---------------MVTQCPIPSST 91 (127)
Q Consensus 40 i~v~~Gd~v~v~~~N~~~----~~~~siH~HG~~~~~~~~~D---------G~~---------------~~~~~~i~PG~ 91 (127)
+.+++++++++.+.|+.. .+.|+||+||+.+....... |.. ......|.||+
T Consensus 406 ~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g 485 (559)
T 2q9o_A 406 VQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGG 485 (559)
T ss_dssp EEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTS
T ss_pred EEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCc
Confidence 778887777765554422 37999999998765332111 211 12233478999
Q ss_pred EEEEEEeCCCceeeEEccCCCCCc
Q psy16567 92 TFRYKFPAMPSGTFFYHSHVDRRP 115 (127)
Q Consensus 92 ~~~y~~~~~~~Gt~~yH~H~~~~~ 115 (127)
....+|.+++||.|+||||+..|.
T Consensus 486 ~v~IrF~adNPG~W~~HCHil~H~ 509 (559)
T 2q9o_A 486 WLLLAFRTDNPGAWLFHCHIAWHV 509 (559)
T ss_dssp EEEEEEECCSCEEEEEEECCHHHH
T ss_pred cEEEEEEcCCCeeEEEEecchhHh
Confidence 999999999999999999997776
No 71
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.20 E-value=1.7e-11 Score=99.17 Aligned_cols=90 Identities=17% Similarity=0.146 Sum_probs=67.2
Q ss_pred EEEECCCCC---CCeEE-EecCCEEEEEEEcCC-CCCceEEEEeeeeeecCCCCCCCc-------------------ccc
Q psy16567 28 ILSINRQLP---GPSIQ-VCKGDTIIVDVKNHM-IDREVTLHWHGVYQKVTPWMDGVP-------------------MVT 83 (127)
Q Consensus 28 ~~~~ng~~p---gP~i~-v~~Gd~v~v~~~N~~-~~~~~siH~HG~~~~~~~~~DG~~-------------------~~~ 83 (127)
.|++||+.. .|.+. ++.|++++++|.|.. . +.|+||+||+.+.... .+|.. ...
T Consensus 325 ~~~iNg~~~~~~~p~~~~~~~g~~v~~~i~N~~~~-~~HP~HLHG~~F~Vl~-~~G~~~~~~~~~~~~~~~~p~~~~~rD 402 (448)
T 3aw5_A 325 QWTINGMFWNASNPLFEHVSVEGVELWEIVNDKAS-MPHPMHLHGFPMWIIE-RKDSPRQVAELAVDNRGRLPTDLGLKD 402 (448)
T ss_dssp EEEETTBCCCTTCTTCCCEEECEEEEEEEEECSSS-CCEEEEESSSCBEEEE-EESCCHHHHTTCCSTTCCCGGGGSCBS
T ss_pred eeeECCCcCCCCCCceeccCCCCeEEEEEEcCCCC-CCcCEEECCceEEEEE-ecCCCcccccccccccCCCccccCCcc
Confidence 399999853 35677 999999999999988 6 8999999998765332 22321 122
Q ss_pred eeeeCCCCEEEEE--Ee---CCCceeeEEccCCCCCc----eeeEEE
Q psy16567 84 QCPIPSSTTFRYK--FP---AMPSGTFFYHSHVDRRP----YCPEIE 121 (127)
Q Consensus 84 ~~~i~PG~~~~y~--~~---~~~~Gt~~yH~H~~~~~----~g~liV 121 (127)
...|.||++.+.. |. +++| |+||||+..|. .+.+.|
T Consensus 403 Tv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V 447 (448)
T 3aw5_A 403 TVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAV 447 (448)
T ss_dssp EEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEE
T ss_pred EEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEe
Confidence 3357899999777 98 8888 99999997765 555554
No 72
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.16 E-value=1.2e-10 Score=93.57 Aligned_cols=99 Identities=18% Similarity=0.197 Sum_probs=76.8
Q ss_pred eEEEEEECCCCCC----CeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcc----cceeeeCCCCEEEEE
Q psy16567 25 ERAILSINRQLPG----PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM----VTQCPIPSSTTFRYK 96 (127)
Q Consensus 25 ~~~~~~~ng~~pg----P~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~----~~~~~i~PG~~~~y~ 96 (127)
....+++||+... |.|.++.|++++++|.|......+++|+||...... +.||.+. .....|.||++.++.
T Consensus 187 ~~~~~liNG~~~~~~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi-~~DG~~~~p~~~~~~~l~pg~r~~v~ 265 (442)
T 2zoo_A 187 DADYVVFNGSVGSTTDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTV-YVEGGSLKNHNVQTTLIPAGGAAIVE 265 (442)
T ss_dssp CCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEE-EGGGSSCEECSBSEEEECTTEEEEEE
T ss_pred CCCEEEECCCcCCCCCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEE-ecCCccCCCccceEEEECCCeeEEEE
Confidence 4467899999643 689999999999999997654679999999876543 3677532 223358899999999
Q ss_pred EeCCCceeeEEccCCCCC-----ceeeEEEEcC
Q psy16567 97 FPAMPSGTFFYHSHVDRR-----PYCPEIEEKK 124 (127)
Q Consensus 97 ~~~~~~Gt~~yH~H~~~~-----~~g~liV~d~ 124 (127)
++++++|+||+|||...+ +.+.|.|...
T Consensus 266 v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~ 298 (442)
T 2zoo_A 266 FKVEVPGTFILVDHSIFRAFNKGALAMLKVEGP 298 (442)
T ss_dssp EECCSCEEEEEEESSTHHHHTTSCEEEEEEESC
T ss_pred EEcCCCCeEEEEecccccccccCceEEEEecCC
Confidence 999999999999997544 2666666643
No 73
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.15 E-value=1.2e-11 Score=106.00 Aligned_cols=87 Identities=9% Similarity=0.080 Sum_probs=71.2
Q ss_pred EEEEECCCCCC--CeEEEecCCEEEEEEEcCCCC-CceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCce
Q psy16567 27 AILSINRQLPG--PSIQVCKGDTIIVDVKNHMID-REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSG 103 (127)
Q Consensus 27 ~~~~~ng~~pg--P~i~v~~Gd~v~v~~~N~~~~-~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~G 103 (127)
.+++|||+..+ |.|+++.|++++++|.|.... ..|+||+||+.+.... .||. ......|.||++.++.|.++++|
T Consensus 355 ~~~~ING~~~~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~-~dg~-~~Dtv~l~Pg~~~~v~~~ad~pG 432 (770)
T 2r7e_B 355 RFHAINGYIMDTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRK-KEEY-KMALYNLYPGVFETVEMLPSKAG 432 (770)
T ss_dssp CEECTTSCTTTTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCS-SSCC-EESEEECCTTCCCEEEECCSSCB
T ss_pred CccccCCccCCCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEe-cCCc-eeeEEEECCCeEEEEEEEeCCCC
Confidence 57899999753 779999999999999998652 3799999999877543 5654 23345689999999999999999
Q ss_pred eeEEccCCCCCc
Q psy16567 104 TFFYHSHVDRRP 115 (127)
Q Consensus 104 t~~yH~H~~~~~ 115 (127)
.|++|||...|.
T Consensus 433 ~w~~hcH~~~H~ 444 (770)
T 2r7e_B 433 IWRVECLIGEHL 444 (770)
T ss_dssp CCCBCCCSHHHH
T ss_pred ceEEEecccccc
Confidence 999999986554
No 74
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.15 E-value=1.7e-10 Score=89.81 Aligned_cols=96 Identities=14% Similarity=0.075 Sum_probs=68.7
Q ss_pred EEEEEECCCCC----CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcc------cceeeeCCCCEEEE
Q psy16567 26 RAILSINRQLP----GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM------VTQCPIPSSTTFRY 95 (127)
Q Consensus 26 ~~~~~~ng~~p----gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~------~~~~~i~PG~~~~y 95 (127)
...|++||+.. .|.|.+++|++++|++.|... ..+..|.||+.... +.||... +....|.||++++.
T Consensus 215 ~~~~~iNG~~~~~~~~~~l~v~~G~r~Rl~n~~~~~-~~~~~~i~gh~~~V--i~dG~~~~~p~~~~dtv~l~pGer~~v 291 (340)
T 2bw4_A 215 PTHIVFNGAVGALTGDHALTAAVGERVLVVHSQANR-DTRPHLIGGHGDYV--WATGKFRNPPDLDQETWLIPGGTAGAA 291 (340)
T ss_dssp CSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSS-CBCEEEETCCEEEE--ETTCCTTSCCEEEESCCCBCTTEEEEE
T ss_pred CCEEEECCccCCccCCCceEcCCCCEEEEEECCCCC-ccceEEecCcceEE--eCCCcccCCccccceEEEeCCCceEEE
Confidence 35799999864 388999999999988877654 33444455544433 2466431 12235789999999
Q ss_pred EEeCCCceeeEEccCCCC-C----ceeeEEEEcC
Q psy16567 96 KFPAMPSGTFFYHSHVDR-R----PYCPEIEEKK 124 (127)
Q Consensus 96 ~~~~~~~Gt~~yH~H~~~-~----~~g~liV~d~ 124 (127)
.++++++|.||||||... + +.|.+.|+++
T Consensus 292 ~v~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~ 325 (340)
T 2bw4_A 292 FYTFRQPGVYAYVNHNLIEAFELGAAGHFKVTGE 325 (340)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTSCEEEEEEESC
T ss_pred EEECCCCeeeEEEcCchHHHHhCCCEEEEEECCC
Confidence 999999999999999863 3 2677888754
No 75
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.14 E-value=3.8e-11 Score=97.14 Aligned_cols=90 Identities=13% Similarity=0.078 Sum_probs=67.9
Q ss_pred EEEECCCCC---CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcc-------cceeeeCCCCEEEEEE
Q psy16567 28 ILSINRQLP---GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM-------VTQCPIPSSTTFRYKF 97 (127)
Q Consensus 28 ~~~~ng~~p---gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~-------~~~~~i~PG~~~~y~~ 97 (127)
.|++||+.. .+.+.++.|++++++|.|. +.|+||+||..+.... .+|.+. .....| |++.+.+|
T Consensus 334 ~~~iNg~~f~~~~~~~~~~~G~~~~~~l~N~---~~HP~HLHGh~F~Vl~-~~G~~~~~~~p~~rDTv~v--g~~~~i~~ 407 (451)
T 2uxt_A 334 DPGINGQLWDVNRIDVTAQQGTWERWTVRAD---EPQAFHIEGVMFQIRN-VNGAMPFPEDRGWKDTVWV--DGQVELLV 407 (451)
T ss_dssp SSSBTTBCCCTTCCCEEEETTCEEEEEEEEE---EEEEEEETTCEEEEEE-ETTBCCCGGGSSCBSEEEE--EEEEEEEE
T ss_pred EEEECCEeCCCCCCcEEcCCCCEEEEEEECC---CCcCeEECCceEEEEe-eCCcCCCcccCCCccEEEE--CCEEEEEE
Confidence 488999753 3569999999999999997 4799999998776433 355321 122234 88999999
Q ss_pred eCCCcee----eEEccCCCCCc----eeeEEEEc
Q psy16567 98 PAMPSGT----FFYHSHVDRRP----YCPEIEEK 123 (127)
Q Consensus 98 ~~~~~Gt----~~yH~H~~~~~----~g~liV~d 123 (127)
.++++|. |+||||...|. .+.+.|.+
T Consensus 408 ~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~ 441 (451)
T 2uxt_A 408 YFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNP 441 (451)
T ss_dssp ECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEEC
T ss_pred EeCCCCCCCCceEEeCCchhHHhCCCcEEEEEcc
Confidence 9988877 99999997665 66676654
No 76
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=99.12 E-value=1.1e-10 Score=75.44 Aligned_cols=76 Identities=13% Similarity=0.120 Sum_probs=55.4
Q ss_pred CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcc----cceeeeCCCCEEEEEEeCCCceeeEEccCCC
Q psy16567 37 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM----VTQCPIPSSTTFRYKFPAMPSGTFFYHSHVD 112 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~----~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H~~ 112 (127)
.+.|++++||+|++ .|... .+|++|+++...+ +|... .....+.||+++++.|. ++|+|+|||+..
T Consensus 17 P~~i~v~~G~~V~~--~n~~~-~~H~~~~~~~~~p-----~~~~~~~~~~~~~~~~pG~~~~~tf~--~~G~y~y~C~~H 86 (98)
T 2plt_A 17 PKTLTIKSGETVNF--VNNAG-FPHNIVFDEDAIP-----SGVNADAISRDDYLNAPGETYSVKLT--AAGEYGYYCEPH 86 (98)
T ss_dssp SSEEEECTTCEEEE--EECSS-CCEEEEECGGGSC-----TTCCHHHHCEEEEECSTTCEEEEECC--SCEEEEEECGGG
T ss_pred CCEEEECCCCEEEE--EECCC-CceEEEEeCCCCC-----CccccccccccceecCCCCEEEEEeC--CCeEEEEEcCCc
Confidence 46799999998765 78876 7899999875432 22110 11235799999988775 899999999854
Q ss_pred C--CceeeEEEE
Q psy16567 113 R--RPYCPEIEE 122 (127)
Q Consensus 113 ~--~~~g~liV~ 122 (127)
. .+.|.|+|+
T Consensus 87 ~~~gM~G~i~V~ 98 (98)
T 2plt_A 87 QGAGMVGKIIVQ 98 (98)
T ss_dssp GGGTCEEEEEEC
T ss_pred cccCCeEEEEEC
Confidence 4 458999884
No 77
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.12 E-value=8.7e-11 Score=97.98 Aligned_cols=81 Identities=14% Similarity=0.211 Sum_probs=58.7
Q ss_pred ecCCEEEEEEEcCC--CCCceEEEEeeeeeecCCCCCCC---------------cccceeeeCCCCEEEEEEeCCCceee
Q psy16567 43 CKGDTIIVDVKNHM--IDREVTLHWHGVYQKVTPWMDGV---------------PMVTQCPIPSSTTFRYKFPAMPSGTF 105 (127)
Q Consensus 43 ~~Gd~v~v~~~N~~--~~~~~siH~HG~~~~~~~~~DG~---------------~~~~~~~i~PG~~~~y~~~~~~~Gt~ 105 (127)
+.|+.|+|.|.|.. . ..|+||+||+.+.......|. +......|.|++....+|.+++||.|
T Consensus 444 ~~~~~VeiVi~n~~~~~-~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W 522 (580)
T 3sqr_A 444 ANEEWVVYVIEDLTGFG-IWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522 (580)
T ss_dssp --CCEEEEEEEECSSSC-CCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEE
T ss_pred CCCcEEEEEEeCCCccc-cceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCCeee
Confidence 35999999999987 6 799999999865432211111 11223347899999999999999999
Q ss_pred EEccCCCCCc---eeeEEEEcC
Q psy16567 106 FYHSHVDRRP---YCPEIEEKK 124 (127)
Q Consensus 106 ~yH~H~~~~~---~g~liV~d~ 124 (127)
++|||+..|. .+..++|++
T Consensus 523 ~~HCHi~~H~~~Gm~~~~~e~~ 544 (580)
T 3sqr_A 523 LLHCHIAWHASEGLAMQFVESQ 544 (580)
T ss_dssp EEEECSHHHHHTTCEEEEEESG
T ss_pred EEEECcHHHhhCCCcEEEEECH
Confidence 9999998876 455556554
No 78
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.12 E-value=2.4e-10 Score=88.82 Aligned_cols=96 Identities=15% Similarity=0.094 Sum_probs=68.5
Q ss_pred eEEEEEECCCCC----CCeEEEecCCEEEEEEEcCCCC-CceEEEEeeeeeecCCCCCCCcc------cceeeeCCCCEE
Q psy16567 25 ERAILSINRQLP----GPSIQVCKGDTIIVDVKNHMID-REVTLHWHGVYQKVTPWMDGVPM------VTQCPIPSSTTF 93 (127)
Q Consensus 25 ~~~~~~~ng~~p----gP~i~v~~Gd~v~v~~~N~~~~-~~~siH~HG~~~~~~~~~DG~~~------~~~~~i~PG~~~ 93 (127)
....|+|||+.. .+.|.+++|+++||++.|.... ..+.+|.|++.+. .||... .....|.||++.
T Consensus 208 ~~~~~~ING~~~~~~~~~~l~v~~Ger~Rl~n~~~~~~~~~h~i~~h~~~Vi----~dG~~~~~p~~~~dtv~l~pGer~ 283 (333)
T 1mzy_A 208 IPSHIVFNGAVGALTGEGALKAKVGDNVLFVHSQPNRDSRPHLIGGHGDLVW----ETGKFHNAPERDLETWFIRGGTAG 283 (333)
T ss_dssp CCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEE----TTCCTTSCCEEEESBCCBCTTEEE
T ss_pred CCcEEEECCcccccCCCcceEecCCCEEEEEECCCCCccccEEECCCCeEEE----eCCcccCCCccCcceEEECCCceE
Confidence 345799999852 3679999999999988876531 1344555665542 366532 223358999999
Q ss_pred EEEEeCCCceeeEEccCCCCC-----ceeeEEEEcC
Q psy16567 94 RYKFPAMPSGTFFYHSHVDRR-----PYCPEIEEKK 124 (127)
Q Consensus 94 ~y~~~~~~~Gt~~yH~H~~~~-----~~g~liV~d~ 124 (127)
+..++++++|.||||||...+ +.|.+-|+++
T Consensus 284 ~v~v~a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~ 319 (333)
T 1mzy_A 284 AALYKFLQPGVYAYVNHNLIEAVHKGATAHVLVEGE 319 (333)
T ss_dssp EEEEECCSCEEEEEEESSHHHHHTTCCEEEEEEESC
T ss_pred EEEEEcCCCEEEEEecChhhhHhhCCCEEEEEEcCC
Confidence 999999999999999998533 2777777644
No 79
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=99.11 E-value=1.5e-09 Score=74.74 Aligned_cols=88 Identities=9% Similarity=0.020 Sum_probs=61.5
Q ss_pred CCCCCeEEEecCCEEEEEEEc--CCCCCceEEEEeeee--eec-------C----CC---CCCCcc-cceeeeCCCCEEE
Q psy16567 34 QLPGPSIQVCKGDTIIVDVKN--HMIDREVTLHWHGVY--QKV-------T----PW---MDGVPM-VTQCPIPSSTTFR 94 (127)
Q Consensus 34 ~~pgP~i~v~~Gd~v~v~~~N--~~~~~~~siH~HG~~--~~~-------~----~~---~DG~~~-~~~~~i~PG~~~~ 94 (127)
.|-.+.|+++.||+|+++|+| ... ..|.++++... ... . .+ .|.... .....|.||++.+
T Consensus 29 ~F~P~~i~v~~G~tV~~~~~N~~~~~-~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~ 107 (140)
T 1qhq_A 29 AFAQTSLSLPANTVVRLDFVNQNNLG-VQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGS 107 (140)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCSSC-CCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEE
T ss_pred eEeCCeEEECCCCEEEEEEECCCCCC-CceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeE
Confidence 344578999999999999999 666 78998887421 000 0 00 010000 0112478999999
Q ss_pred EEEeCCCceeeEEccCCCCC----ceeeEEEE
Q psy16567 95 YKFPAMPSGTFFYHSHVDRR----PYCPEIEE 122 (127)
Q Consensus 95 y~~~~~~~Gt~~yH~H~~~~----~~g~liV~ 122 (127)
+.|.++.+|+|+|+|++..| +.|.|+|.
T Consensus 108 ~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 108 VTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 99999999999999997555 48888885
No 80
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=99.05 E-value=1.8e-10 Score=74.48 Aligned_cols=79 Identities=11% Similarity=0.149 Sum_probs=54.2
Q ss_pred CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCceeeEEccCCCC--C
Q psy16567 37 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVDR--R 114 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H~~~--~ 114 (127)
.+.|++++||+|+++ |... ..|++++++...+... .++.. .....+.||+++++.| +++|+|+|||+... .
T Consensus 18 P~~i~v~~G~~V~~~--n~~~-~~H~~~~~~~~~pg~~-~~~~~-~~~~~~~pG~~~~~tf--~~~G~y~~~C~~H~~~g 90 (98)
T 1pcs_A 18 PSTVTIKAGEEVKWV--NNKL-SPHNIVFDADGVPADT-AAKLS-HKGLLFAAGESFTSTF--TEPGTYTYYCEPHRGAG 90 (98)
T ss_dssp SSEEEECTTCEEEEE--ECSS-CCEEEEECCSSSCHHH-HHHHC-EEEEECSTTCEEEEEC--CSCEEEEEECGGGTTTT
T ss_pred CCEEEECCCCEEEEE--ECCC-CCcEEEEeCCCCCccc-ccccc-ccccccCCCCEEEEEc--CCCeEEEEEcCCccccC
Confidence 467999999998754 7765 6889888765321000 00000 1123579999998877 68999999997544 3
Q ss_pred ceeeEEEE
Q psy16567 115 PYCPEIEE 122 (127)
Q Consensus 115 ~~g~liV~ 122 (127)
+.|.|+|+
T Consensus 91 M~G~i~V~ 98 (98)
T 1pcs_A 91 MVGKVVVE 98 (98)
T ss_dssp CEEEEEEC
T ss_pred CeEEEEEC
Confidence 69999984
No 81
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=99.04 E-value=1.2e-09 Score=69.41 Aligned_cols=73 Identities=18% Similarity=0.207 Sum_probs=52.6
Q ss_pred CCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCceeeEEccCCCC--
Q psy16567 36 PGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVDR-- 113 (127)
Q Consensus 36 pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H~~~-- 113 (127)
-.+.|+++.||+|++ .|... ..|+++.++.. ++. .....+.||+++++.| +++|+|+|||+...
T Consensus 17 ~P~~i~v~~Gd~V~~--~n~~~-~~H~v~~~~~~----~~~-----~~~~~~~~g~~~~~~f--~~~G~y~~~C~~H~~~ 82 (91)
T 1bxv_A 17 EPSTIEIQAGDTVQW--VNNKL-APHNVVVEGQP----ELS-----HKDLAFSPGETFEATF--SEPGTYTYYCEPHRGA 82 (91)
T ss_dssp ESSEEEECTTCEEEE--EECSS-CCEEEEETTCG----GGC-----EEEEECSTTCEEEEEC--CSCEEEEEECTTTGGG
T ss_pred eCCEEEECCCCEEEE--EECCC-CCcEEEEeCCC----ccC-----cccceeCCCCEEEEEe--CCCEEEEEEeCCCccC
Confidence 346799999999875 47765 67888877621 000 1123579999988877 78999999999543
Q ss_pred CceeeEEEE
Q psy16567 114 RPYCPEIEE 122 (127)
Q Consensus 114 ~~~g~liV~ 122 (127)
.+.|.|+|+
T Consensus 83 gM~g~i~V~ 91 (91)
T 1bxv_A 83 GMVGKIVVQ 91 (91)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 358888884
No 82
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.99 E-value=2.2e-09 Score=73.27 Aligned_cols=75 Identities=13% Similarity=0.030 Sum_probs=50.6
Q ss_pred CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCceeeEEccCCCC--C
Q psy16567 37 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVDR--R 114 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H~~~--~ 114 (127)
.+.|+++.||+|++. |.. .+|++..+.. .+.+|... ..+.||+++++.| +.+|+|+|+|-... .
T Consensus 21 P~~i~V~~GDTV~f~--n~~--~~Hnv~~~~~-----~~p~g~~~---~~~~pg~t~s~TF--~~~G~y~Y~C~~H~~~G 86 (124)
T 3ef4_A 21 PGFVKVEAGDTVKFV--PTD--KSHNAESVRE-----VWPEGVAP---VKGGFSKEVVFNA--EKEGLYVLKCAPHYGMG 86 (124)
T ss_dssp SSEEEECTTCEEEEE--CSS--SSCCCEECTT-----TSCTTSCC---CBCCTTCCEEEEC--CSSEEEEEECTTTGGGT
T ss_pred CCEEEECCCCEEEEE--ECC--CCccEEEeCC-----cCCCCccc---cccCCCCEEEEEe--CCCeEEEEEcCCCCcCC
Confidence 368999999998755 543 3555544321 12233211 1367999888777 68999999996443 3
Q ss_pred ceeeEEEEcCC
Q psy16567 115 PYCPEIEEKKK 125 (127)
Q Consensus 115 ~~g~liV~d~~ 125 (127)
+.|.|+|.+|.
T Consensus 87 M~G~I~V~~p~ 97 (124)
T 3ef4_A 87 MVVLVQVGKPV 97 (124)
T ss_dssp CEEEEEESSCT
T ss_pred CEEEEEECCCC
Confidence 69999998864
No 83
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.98 E-value=1.4e-09 Score=70.08 Aligned_cols=76 Identities=14% Similarity=0.184 Sum_probs=53.8
Q ss_pred CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcc--cceeeeCCCCEEEEEEeCCCceeeEEccCCCC-
Q psy16567 37 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM--VTQCPIPSSTTFRYKFPAMPSGTFFYHSHVDR- 113 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~--~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H~~~- 113 (127)
.+.|++++||+|+ |.|... ..|+++.++... .++... .....+.||+++++.| +++|+|+|||+.+.
T Consensus 18 P~~i~v~~G~~V~--~~n~~~-~~H~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~tf--~~~G~y~y~C~~H~~ 87 (97)
T 1b3i_A 18 PKALSISAGDTVE--FVMNKV-GPHNVIFDKVPA-----GESAPALSNTKLAIAPGSFYSVTL--GTPGTYSFYCTPHRG 87 (97)
T ss_dssp SSEEEECTTCEEE--EEECSS-CCCCBEEEECCT-----TSCHHHHCBCCCCCSCSCCEEEEC--CSCSEEEEECSSTTT
T ss_pred CCEEEECCCCEEE--EEECCC-CCeEEEEeCCCC-----ccccccccccceecCCCCEEEEEe--CCCeEEEEEccChhh
Confidence 4689999999975 458765 678888877542 112100 0112478999998877 79999999998554
Q ss_pred -CceeeEEEE
Q psy16567 114 -RPYCPEIEE 122 (127)
Q Consensus 114 -~~~g~liV~ 122 (127)
.+.|.|+|+
T Consensus 88 ~gM~G~i~V~ 97 (97)
T 1b3i_A 88 AGMVGTITVE 97 (97)
T ss_dssp TTCEEEEEEC
T ss_pred cCCEEEEEEC
Confidence 358999884
No 84
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.97 E-value=2.1e-09 Score=73.28 Aligned_cols=73 Identities=11% Similarity=0.001 Sum_probs=50.3
Q ss_pred CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCceeeEEccCCCCC--
Q psy16567 37 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVDRR-- 114 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H~~~~-- 114 (127)
...|++++||+|++.+.| . . |++......+.+|... ..+.||+++++.| +++|+|+|+|.....
T Consensus 20 P~~i~V~~GdtV~f~~~~--~--~-----H~v~~~~~~~P~g~~~---f~~~pg~t~s~TF--~~pG~y~y~C~~H~~~G 85 (123)
T 3erx_A 20 PAFVRAEPGDVINFVPTD--K--S-----HNVEAIKEILPEGVES---FKSKINESYTLTV--TEPGLYGVKCTPHFGMG 85 (123)
T ss_dssp SSEEEECTTEEEEEEESS--T--T-----CCCEECTTSSCTTCCC---CBCCTTCCEEEEE--CSCEEEEEECGGGTTTT
T ss_pred CCEEEECCCCEEEEEECC--C--C-----ceEEEcCCcCCCCccc---eecCCCCEEEEEe--CCCeEEEEEeCCCCcCC
Confidence 467999999999887766 2 3 3333321112344311 1357999888888 689999999964444
Q ss_pred ceeeEEEEc
Q psy16567 115 PYCPEIEEK 123 (127)
Q Consensus 115 ~~g~liV~d 123 (127)
|.|.|+|++
T Consensus 86 M~G~I~V~~ 94 (123)
T 3erx_A 86 MVGLVQVGD 94 (123)
T ss_dssp CEEEEEESS
T ss_pred cEEEEEECC
Confidence 799999987
No 85
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.95 E-value=1.7e-09 Score=74.06 Aligned_cols=75 Identities=12% Similarity=0.091 Sum_probs=50.4
Q ss_pred CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCceeeEEccCCCCC--
Q psy16567 37 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVDRR-- 114 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H~~~~-- 114 (127)
.+.|++++||+|++.+.|. . |++......+.+|... ..+.||++++|.| +++|+|+|+|..+..
T Consensus 22 P~~i~V~~GDtVtf~n~~~----~-----H~v~~~~~~~P~g~~~---f~s~pGet~s~TF--~~pG~y~y~C~~H~~~G 87 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK----G-----HNSALMKGGAPEGAET---WKGKINEEITVTL--SKPGVYMYQCAPHVGMG 87 (127)
T ss_dssp SSEEEECTTCEEEEECSSS----S-----CCCEECTTCSCTTCCC---CBCCTTCCCEEEC--CSCEEEEEECTTTGGGT
T ss_pred CCEEEECCCCEEEEEECCC----C-----ceEEEccCcCCCCccc---eecCCCCEEEEEe--CCCeEEEEEeCCCCcCC
Confidence 4789999999988665442 3 4443321111233211 1357999877777 789999999975544
Q ss_pred ceeeEEEEcCC
Q psy16567 115 PYCPEIEEKKK 125 (127)
Q Consensus 115 ~~g~liV~d~~ 125 (127)
+.|.|+|+++.
T Consensus 88 M~G~I~V~~~~ 98 (127)
T 3tu6_A 88 MIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEESSCT
T ss_pred cEEEEEECcCC
Confidence 69999999864
No 86
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=98.95 E-value=3.1e-09 Score=82.53 Aligned_cols=96 Identities=16% Similarity=0.140 Sum_probs=67.4
Q ss_pred eEEEEEECCCCC----CCeEEEecCCEEEEEEEcCCCC-CceEEEEeeeeeecCCCCCCCccc------ceeeeCCCCEE
Q psy16567 25 ERAILSINRQLP----GPSIQVCKGDTIIVDVKNHMID-REVTLHWHGVYQKVTPWMDGVPMV------TQCPIPSSTTF 93 (127)
Q Consensus 25 ~~~~~~~ng~~p----gP~i~v~~Gd~v~v~~~N~~~~-~~~siH~HG~~~~~~~~~DG~~~~------~~~~i~PG~~~ 93 (127)
....+++||+.. .|.|.+++|++++|...|.... ..+.+|.|++.+ +.||.... ....|.||+++
T Consensus 208 ~~~~~liNG~~~~~~~~~~l~v~~GervRlin~~~~~~~~~~~i~gh~~~V----i~DG~~~~p~~~~~dtv~i~pGer~ 283 (336)
T 1oe1_A 208 TPSHIVFNGKVGALTGANALTAKVGETVLLIHSQANRDTRPHLIGGHGDWV----WETGKFANPPQRDLETWFIRGGSAG 283 (336)
T ss_dssp CCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEETTCCEEEE----ETTCCTTSCCEEEESBCCBCTTEEE
T ss_pred CCCEEEECCeeccCCCCcceEcCCCCEEEEEecCCCCccceEEECCcCceE----eCCCcCcCCccccceEEEECCCCcE
Confidence 446899999864 3889999999998866655431 123334444443 24776321 23347899999
Q ss_pred EEEEeCCCceeeEEccCCCCC-----ceeeEEEEcC
Q psy16567 94 RYKFPAMPSGTFFYHSHVDRR-----PYCPEIEEKK 124 (127)
Q Consensus 94 ~y~~~~~~~Gt~~yH~H~~~~-----~~g~liV~d~ 124 (127)
+..++++++|+||||||...+ +.|.+.|+++
T Consensus 284 dvlv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~ 319 (336)
T 1oe1_A 284 AALYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGK 319 (336)
T ss_dssp EEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEESC
T ss_pred EEEEEcCCCceEEEEechhhccccCCCeEEEEECCC
Confidence 999999999999999998432 2788888754
No 87
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.93 E-value=2.9e-09 Score=68.81 Aligned_cols=76 Identities=11% Similarity=0.069 Sum_probs=54.0
Q ss_pred CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcc------cceeeeCCCCEEEEEEeCCCceeeEEccC
Q psy16567 37 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM------VTQCPIPSSTTFRYKFPAMPSGTFFYHSH 110 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~------~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H 110 (127)
.+.|++++||+|+ |.|... .+|++++++... .+|... .....+.||+++++.|. ++|+|+|||+
T Consensus 16 P~~i~v~~G~tV~--~~n~~~-~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~--~~G~y~~~C~ 85 (99)
T 1byp_A 16 PSDLSIASGEKIT--FKNNAG-FPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT--EKGTYKFYCA 85 (99)
T ss_dssp SSEEEECTTEEEE--EEECSS-CCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC--SCEEEEEECG
T ss_pred CCEEEECCCCEEE--EEECCC-CcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC--CCcEEEEEcC
Confidence 4679999999865 478876 788888876432 122110 11124789999998885 8999999998
Q ss_pred CCC--CceeeEEEE
Q psy16567 111 VDR--RPYCPEIEE 122 (127)
Q Consensus 111 ~~~--~~~g~liV~ 122 (127)
... .+.|.|+|+
T Consensus 86 ~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 PHAGAGMVGKVTVN 99 (99)
T ss_dssp GGTTTTCEEEEEEC
T ss_pred CccccCCEEEEEEC
Confidence 544 458999884
No 88
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=98.93 E-value=1.4e-08 Score=84.71 Aligned_cols=97 Identities=22% Similarity=0.206 Sum_probs=70.6
Q ss_pred CcceEeecCCceE--EEEEECCCCCCCeEEEecCCEEEEEEEcCCC--CCceEEEEeeeeeecCCCCCCCcccceeeeCC
Q psy16567 14 RRKGCVTADGFER--AILSINRQLPGPSIQVCKGDTIIVDVKNHMI--DREVTLHWHGVYQKVTPWMDGVPMVTQCPIPS 89 (127)
Q Consensus 14 ~~~~~v~~~G~~~--~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~--~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~P 89 (127)
+..+.|..+|.+. .+...+-.|-.+.|++++|++|++.++|... +.. |++..+. -|. ..-+.|
T Consensus 532 ~~~~~v~RdGnkV~V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDVi-----HSF~IPs----lGI----K~DaiP 598 (638)
T 3sbq_A 532 DTDNKVIRDGNKVRVYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVS-----HGFVVVN----HGV----SMEISP 598 (638)
T ss_dssp TTCCEEEEETTEEEEEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCC-----EEEEETT----TTE----EEEECT
T ss_pred ccccccccCCceEEEEEEEEcccccCCEEEEecCceeEEEEecCCcCCCce-----eeeEecC----CCc----eeeeCC
Confidence 4456677888654 4455556666788999999999999999742 133 5544422 121 124799
Q ss_pred CCEEEEEEeCCCceeeEEccCC-----CCCceeeEEEEc
Q psy16567 90 STTFRYKFPAMPSGTFFYHSHV-----DRRPYCPEIEEK 123 (127)
Q Consensus 90 G~~~~y~~~~~~~Gt~~yH~H~-----~~~~~g~liV~d 123 (127)
|++.++.|+++++|+|+|+|.. +..|.|.|+|+.
T Consensus 599 GrtnsvtFtadkPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 599 QQTSSITFVADKPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp TCEEEEEEECCSCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCeEEEEEEcCCCEEEEEECCCcCCCCcccceEEEEEec
Confidence 9999999999999999999973 334699999975
No 89
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.91 E-value=4.5e-09 Score=68.26 Aligned_cols=80 Identities=10% Similarity=0.014 Sum_probs=51.9
Q ss_pred CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeec-----CCCCCCCcccceeeeCCCCEEEEEEeCCCceeeEEccCC
Q psy16567 37 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKV-----TPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV 111 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~-----~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H~ 111 (127)
.+.|++++||+|++ .|... .+|+++++.-.... .....+.. .....+.||+++++.| +++|+|+|+|+.
T Consensus 16 P~~i~v~~G~tV~~--~n~~~-~~H~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pG~~~~~tf--~~~G~y~y~C~~ 89 (102)
T 1kdj_A 16 PDSITVSAGEAVEF--TLVGE-TGHNIVFDIPAGAPGTVASELKAASMD-ENDLLSEDEPSFKAKV--STPGTYTFYCTP 89 (102)
T ss_dssp SSEEEECTTCCEEE--EECSS-SCBCCEECCCTTCCHHHHHHHHHTSCC-TTCCBBTTBCEEEECC--CSCEEEEEECST
T ss_pred CCEEEECCCCEEEE--EECCC-CCeEEEEeCcccccccccchhhccccc-ccceecCCCCEEEEEe--CCCeEEEEEeCC
Confidence 47799999999875 58765 67888776210000 00000000 0122478999988877 799999999995
Q ss_pred CC--CceeeEEEE
Q psy16567 112 DR--RPYCPEIEE 122 (127)
Q Consensus 112 ~~--~~~g~liV~ 122 (127)
.. .+.|.|+|+
T Consensus 90 H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 90 HKSANMKGTLTVK 102 (102)
T ss_dssp TGGGTCEEEEEEC
T ss_pred CcccCCeEEEEEC
Confidence 44 359999884
No 90
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.91 E-value=1e-08 Score=70.28 Aligned_cols=79 Identities=13% Similarity=0.153 Sum_probs=55.8
Q ss_pred CCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCceeeEEccCC
Q psy16567 32 NRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV 111 (127)
Q Consensus 32 ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H~ 111 (127)
+-.|-.+.|+++.||+|++ .|... .+|++++... .+|........+.||+++++.| +++|+|+|+|-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~-~~H~v~~~~~-------~~g~~~~~s~~l~pG~t~~~tF--~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEV-MPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITF--NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSS-SCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE--CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCC-CceEEEEeCC-------CCCcccccccccCCCCEEEEEc--CCCEEEEEEeCC
Confidence 4445557899999999875 48766 6666655321 1121112222478999999888 689999999987
Q ss_pred CCCceeeEEEE
Q psy16567 112 DRRPYCPEIEE 122 (127)
Q Consensus 112 ~~~~~g~liV~ 122 (127)
+..+.|.|+|+
T Consensus 122 H~gM~G~I~V~ 132 (132)
T 3c75_A 122 HPFMRGKVIVE 132 (132)
T ss_dssp CTTCEEEEEEC
T ss_pred CcCCEEEEEEC
Confidence 66779999985
No 91
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.89 E-value=4.9e-09 Score=67.82 Aligned_cols=76 Identities=12% Similarity=0.105 Sum_probs=52.9
Q ss_pred CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcc------cceeeeCCCCEEEEEEeCCCceeeEEccC
Q psy16567 37 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM------VTQCPIPSSTTFRYKFPAMPSGTFFYHSH 110 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~------~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H 110 (127)
.+.|++++||+|++ .|... .+|+++.+.... .+|... .....+.||+++++.| +++|+|+|+|+
T Consensus 16 P~~i~v~~G~tV~~--~n~~~-~~H~v~~~~~~~-----p~~~~~~~~~~~~~~~~~~~G~~~~~tf--~~~G~y~~~C~ 85 (99)
T 1plc_A 16 PSEFSISPGEKIVF--KNNAG-FPHNIVFDEDSI-----PSGVDASKISMSEEDLLNAKGETFEVAL--SNKGEYSFYCS 85 (99)
T ss_dssp SSEEEECTTCEEEE--EECSS-CCBCCEECTTSS-----CTTCCHHHHCCCTTCCBCSTTCEEEEEC--CSCEEEEEECG
T ss_pred CCEEEECCCCEEEE--EECCC-CceEEEEeCCCC-----cccccccccccccCccccCCCCEEEEEE--CCCceEEEEcC
Confidence 46899999998765 78776 678887765322 122110 0112478999988877 48999999998
Q ss_pred CCC--CceeeEEEE
Q psy16567 111 VDR--RPYCPEIEE 122 (127)
Q Consensus 111 ~~~--~~~g~liV~ 122 (127)
.+. .+.|.|+|+
T Consensus 86 ~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 PHQGAGMVGKVTVN 99 (99)
T ss_dssp GGTTTTCEEEEEEC
T ss_pred CCcccCCEEEEEEC
Confidence 544 458999884
No 92
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.83 E-value=2.4e-08 Score=65.81 Aligned_cols=79 Identities=13% Similarity=0.148 Sum_probs=53.8
Q ss_pred CCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCceeeEEccCC
Q psy16567 32 NRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV 111 (127)
Q Consensus 32 ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H~ 111 (127)
+-.|-.+.|+++.||+|++. |... ..|++..... ..|........+.||+++++.| +++|+|.|+|-.
T Consensus 28 ~~~F~P~~i~V~~G~tV~~~--N~d~-~~H~v~~~~~-------~~~~~~~~s~~l~~g~~~~~tf--~~~G~y~~~C~~ 95 (106)
T 1id2_A 28 KMKYLTPEVTIKAGETVYWV--NGEV-MPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITF--NEAGSYDYFCTP 95 (106)
T ss_dssp TTEESSSEEEECTTCEEEEE--ECSS-SCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE--CSCEEEEEECSS
T ss_pred ecEEeCCEEEECCCCEEEEE--ECCC-CcEEEEEeCC-------CCCcccccccccCCCCEEEEEe--CCCEEEEEEeCC
Confidence 44455578999999998754 8765 5555544321 1111111112478999998888 689999999988
Q ss_pred CCCceeeEEEE
Q psy16567 112 DRRPYCPEIEE 122 (127)
Q Consensus 112 ~~~~~g~liV~ 122 (127)
+..+.|.|+|+
T Consensus 96 H~~M~G~I~V~ 106 (106)
T 1id2_A 96 HPFMRGKVIVE 106 (106)
T ss_dssp CTTCEEEEEEC
T ss_pred CCCCEEEEEEC
Confidence 66779999984
No 93
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.76 E-value=3.9e-08 Score=67.42 Aligned_cols=88 Identities=11% Similarity=-0.011 Sum_probs=56.8
Q ss_pred CCCCeEEEecC-CEEEEEEEcCCCCCc-----eEEEEeeeeee---------c---CCC---CCCCcccceeeeCCCCEE
Q psy16567 35 LPGPSIQVCKG-DTIIVDVKNHMIDRE-----VTLHWHGVYQK---------V---TPW---MDGVPMVTQCPIPSSTTF 93 (127)
Q Consensus 35 ~pgP~i~v~~G-d~v~v~~~N~~~~~~-----~siH~HG~~~~---------~---~~~---~DG~~~~~~~~i~PG~~~ 93 (127)
|-...|.|++| |+|+|+|+|... .+ |.+-+-..... . ..+ .|..-......|.||++.
T Consensus 15 F~p~~i~V~~G~~~vtv~~~N~g~-~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 15 YSTRSISVPASCAEFTVNFEHKGH-MPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CSCSEEEEETTCSEEEEEEEECSS-SCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred EccCeEEEcCCCeEEEEEEEECCC-CcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 44467999999 999999999875 33 44433221000 0 000 011000011247899999
Q ss_pred EEEEeCC---CceeeEEccCCCCC---ceeeEEEEc
Q psy16567 94 RYKFPAM---PSGTFFYHSHVDRR---PYCPEIEEK 123 (127)
Q Consensus 94 ~y~~~~~---~~Gt~~yH~H~~~~---~~g~liV~d 123 (127)
++.|+++ ++|+|+|.|-.-+| +.|.|+|++
T Consensus 94 svtf~~~~~~~~G~Y~f~C~~pgH~~~M~G~i~V~~ 129 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCTTTSEEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCCchHcCEEEEEEeC
Confidence 9999987 99999999965443 599999974
No 94
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.76 E-value=7.7e-08 Score=62.17 Aligned_cols=76 Identities=13% Similarity=0.027 Sum_probs=52.3
Q ss_pred CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcc----cceeeeCCCCEEEEEEeCCCceeeEEccCCC
Q psy16567 37 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM----VTQCPIPSSTTFRYKFPAMPSGTFFYHSHVD 112 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~----~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H~~ 112 (127)
.+.|++++||+|++ .|... ..|++....- .+.+|... .....+.||+++++.| +++|+|+|+|-.+
T Consensus 17 P~~i~v~~GdtV~~--~n~~~-~~H~v~~~~~-----~~p~g~~~~~~~~~~~~~~~g~~~~~tf--~~~G~y~y~C~~H 86 (98)
T 1iuz_A 17 PSKISVAAGEAIEF--VNNAG-FPHNIVFDED-----AVPAGVDADAISYDDYLNSKGETVVRKL--STPGVYGVYCEPH 86 (98)
T ss_dssp SSEEEECTTCEEEE--EECSS-CCEEEEECTT-----SSCTTCCHHHHCEEEEECSTTCEEEEEC--CSCEEEEEECTTT
T ss_pred CCEEEECCCCEEEE--EECCC-CCEEEEEeCC-----CCccccccccccccccccCCCCEEEEEc--CCCEEEEEEchhh
Confidence 47899999999775 57765 5676655431 11233211 1112578999988877 7999999999875
Q ss_pred C--CceeeEEEE
Q psy16567 113 R--RPYCPEIEE 122 (127)
Q Consensus 113 ~--~~~g~liV~ 122 (127)
. .+.|.|+|+
T Consensus 87 ~~~gM~G~I~V~ 98 (98)
T 1iuz_A 87 AGAGMKMTITVQ 98 (98)
T ss_dssp GGGTCEEEEEEC
T ss_pred ccCCCEEEEEEC
Confidence 5 569999984
No 95
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.72 E-value=6.6e-08 Score=65.68 Aligned_cols=74 Identities=8% Similarity=-0.005 Sum_probs=47.9
Q ss_pred CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCceeeEEccCCCC--C
Q psy16567 37 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVDR--R 114 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H~~~--~ 114 (127)
.+.|+++.||+|++ .|... .|++..+ .....+|.... .+.||+++++.| +.+|+|+|+|..+. .
T Consensus 20 P~~i~V~~GdtV~f--~~~~~--~H~v~~~-----~~~~p~~~~~~---~~~pG~t~~~tF--~~~G~y~y~C~~H~~~g 85 (123)
T 1paz_A 20 PAYIKANPGDTVTF--IPVDK--GHNVESI-----KDMIPEGAEKF---KSKINENYVLTV--TQPGAYLVKCTPHYAMG 85 (123)
T ss_dssp SSEEEECTTCEEEE--EESSS--SCCCEEC-----TTCSCTTCCCC---BCCTTCCEEEEC--CSCEEEEEECTTTGGGT
T ss_pred CCEEEECCCCEEEE--EECCC--CeEEEEe-----cccCCCCccce---ecCCCCEEEEEe--CCCEEEEEEeCCcccCC
Confidence 47899999999865 45432 3443332 11122332111 256899877666 68999999996544 5
Q ss_pred ceeeEEEEcC
Q psy16567 115 PYCPEIEEKK 124 (127)
Q Consensus 115 ~~g~liV~d~ 124 (127)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1paz_A 86 MIALIAVGDS 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred CEEEEEEcCC
Confidence 6999999873
No 96
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.70 E-value=1.4e-07 Score=67.38 Aligned_cols=89 Identities=10% Similarity=0.023 Sum_probs=57.6
Q ss_pred CCCCCeEEE-ecCCEEEEEEEcCCCCCc-----eEEEEeeeee-e-------cC---CC---CCCCcccceeeeCCCCEE
Q psy16567 34 QLPGPSIQV-CKGDTIIVDVKNHMIDRE-----VTLHWHGVYQ-K-------VT---PW---MDGVPMVTQCPIPSSTTF 93 (127)
Q Consensus 34 ~~pgP~i~v-~~Gd~v~v~~~N~~~~~~-----~siH~HG~~~-~-------~~---~~---~DG~~~~~~~~i~PG~~~ 93 (127)
+|-...|.| +.||+|+|+|+|... .+ |.+-+-.... . .. .+ .|.........|.||++.
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~-~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~ 132 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGT-QPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEES 132 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSC-SCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecceEEEecCCCEEEEEEEECCC-CccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEE
Confidence 454567999 999999999999876 43 4433311100 0 00 00 011000011247999999
Q ss_pred EEEEeCC--CceeeEEccCCCCC---ceeeEEEEc
Q psy16567 94 RYKFPAM--PSGTFFYHSHVDRR---PYCPEIEEK 123 (127)
Q Consensus 94 ~y~~~~~--~~Gt~~yH~H~~~~---~~g~liV~d 123 (127)
++.|+++ ++|+|+|+|-+-+| +.|-|+|++
T Consensus 133 svtf~~~~lkpG~Y~f~Ct~PgH~~gM~G~i~V~~ 167 (167)
T 3ay2_A 133 SLTLDPAKLADGDYKFACTFPGHGALMNGKVTLVD 167 (167)
T ss_dssp EEEECGGGGTTSCEEEECCSTTGGGTSEEEEEEEC
T ss_pred EEEEecCCCCCcEEEEEcCCCCchhcCEEEEEEeC
Confidence 9999987 89999999976554 599999974
No 97
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.70 E-value=6.7e-08 Score=65.64 Aligned_cols=74 Identities=14% Similarity=0.033 Sum_probs=48.4
Q ss_pred CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCceeeEEccCCCC--C
Q psy16567 37 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVDR--R 114 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H~~~--~ 114 (127)
.+.|+++.||+|++ .|... .|++..+ ...+.+|.... .+.||+++++.| +.+|+|+|+|..+. .
T Consensus 20 P~~i~V~~GdtV~f--~n~~~--~H~v~~~-----~~~~p~~~~~~---~~~pG~t~~~tF--~~~G~y~y~C~~H~~~g 85 (123)
T 1pmy_A 20 PALVRLKPGDSIKF--LPTDK--GHNVETI-----KGMAPDGADYV---KTTVGQEAVVKF--DKEGVYGFKCAPHYMMG 85 (123)
T ss_dssp SSEEEECTTCEEEE--ECSSS--SCCCEEC-----TTSSCTTCCCC---BCCTTSCEEEEC--CSCEEEEEECSTTTTTT
T ss_pred CCEEEECCCCEEEE--EECCC--CcEEEEe-----cccCCCCccce---ecCCCCEEEEEe--CCCeEEEEEeCCccccC
Confidence 47899999999765 55532 3333322 11123332111 357999877766 68999999996544 5
Q ss_pred ceeeEEEEcC
Q psy16567 115 PYCPEIEEKK 124 (127)
Q Consensus 115 ~~g~liV~d~ 124 (127)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1pmy_A 86 MVALVVVGDK 95 (123)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEEcCC
Confidence 6999999863
No 98
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=98.68 E-value=5.4e-08 Score=65.98 Aligned_cols=73 Identities=12% Similarity=0.046 Sum_probs=50.1
Q ss_pred CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCceeeEEccCCCCCce
Q psy16567 37 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVDRRPY 116 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H~~~~~~ 116 (127)
.+.|++++||+|++ .|... .|+++... ....+|.... .+.||+++++.| +++|+|+|+|-.+..|.
T Consensus 20 P~~i~V~~GdtV~f--~n~d~--~H~v~~~~-----~~~p~~~~~~---~~~~g~t~~~tF--~~~G~y~y~C~~H~~M~ 85 (122)
T 2ux6_A 20 PASLKVAPGDTVTF--IPTDK--GHNVETIK-----GMIPDGAEAF---KSKINENYKVTF--TAPGVYGVKCTPHPFMV 85 (122)
T ss_dssp SSEEEECTTEEEEE--EESSS--SCCCEECT-----TCSCTTCCCC---BCCTTCCEEEEE--CSCEEEEEEETTEEEEE
T ss_pred CCEEEECCCCEEEE--EECCC--CcEEEEcc-----cccCCCccee---ecCCCCEEEEEe--CCCEEEEEEeCCCccCE
Confidence 46899999998775 45532 34443322 1112332111 357899988888 68999999998866689
Q ss_pred eeEEEEc
Q psy16567 117 CPEIEEK 123 (127)
Q Consensus 117 g~liV~d 123 (127)
|.|+|.+
T Consensus 86 G~I~V~~ 92 (122)
T 2ux6_A 86 GVVQVGD 92 (122)
T ss_dssp EEEEESS
T ss_pred EEEEEeC
Confidence 9999987
No 99
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=98.47 E-value=1.5e-06 Score=59.37 Aligned_cols=89 Identities=12% Similarity=0.003 Sum_probs=57.2
Q ss_pred CCCCCeEEE-ecCCEEEEEEEcCCCCCc-----eEEEEeeeee---------ec---C---CCCCCCcccceeeeCCCCE
Q psy16567 34 QLPGPSIQV-CKGDTIIVDVKNHMIDRE-----VTLHWHGVYQ---------KV---T---PWMDGVPMVTQCPIPSSTT 92 (127)
Q Consensus 34 ~~pgP~i~v-~~Gd~v~v~~~N~~~~~~-----~siH~HG~~~---------~~---~---~~~DG~~~~~~~~i~PG~~ 92 (127)
+|-...|.| +.|++|+|+|+|... .+ |.+-+=.... .. . +..|..-......|.||++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~-~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes 91 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGK-LPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGET 91 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSC-SCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCE
T ss_pred eEecCEEEEecCCcEEEEEEEECCC-CcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCE
Confidence 344567999 999999999999876 43 5544322100 00 0 0011100001124799999
Q ss_pred EEEEEeCC--Ccee-eEEccCCCCC---ceeeEEEEc
Q psy16567 93 FRYKFPAM--PSGT-FFYHSHVDRR---PYCPEIEEK 123 (127)
Q Consensus 93 ~~y~~~~~--~~Gt-~~yH~H~~~~---~~g~liV~d 123 (127)
.++.|.+. ++|+ |+|.|.+-+| +.|.|+|.+
T Consensus 92 ~~vtf~~~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~~ 128 (128)
T 2iaa_C 92 DSVTFDVSKLKEGEDYAFFCSFPGHWSIMKGTIELGS 128 (128)
T ss_dssp EEEEEESSCCCTTCCEEEECCSTTCTTTSEEEEEECC
T ss_pred EEEEEeccccCCCceEEEEECCCChhHCCEEEEEEeC
Confidence 99999998 8985 9999976444 599999853
No 100
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.46 E-value=4.4e-07 Score=62.13 Aligned_cols=89 Identities=11% Similarity=-0.040 Sum_probs=56.3
Q ss_pred CCCCCeEEE-ecCCEEEEEEEcCCCCCc-----eEEEEeeeee---------ec---C---CCCCCCcccceeeeCCCCE
Q psy16567 34 QLPGPSIQV-CKGDTIIVDVKNHMIDRE-----VTLHWHGVYQ---------KV---T---PWMDGVPMVTQCPIPSSTT 92 (127)
Q Consensus 34 ~~pgP~i~v-~~Gd~v~v~~~N~~~~~~-----~siH~HG~~~---------~~---~---~~~DG~~~~~~~~i~PG~~ 92 (127)
+|-...|.| +.||+|+|+|+|... .+ |.+-+-.... .. . +..|..-......|.||++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~-~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet 92 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGK-MAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGES 92 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSC-CCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCE
T ss_pred cEecceEEEecCCCEEEEEEEECCC-cccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCE
Confidence 344467999 999999999999876 43 5443321100 00 0 0011100001124799999
Q ss_pred EEEEEeCC--Ccee-eEEccCCCCC---ceeeEEEEc
Q psy16567 93 FRYKFPAM--PSGT-FFYHSHVDRR---PYCPEIEEK 123 (127)
Q Consensus 93 ~~y~~~~~--~~Gt-~~yH~H~~~~---~~g~liV~d 123 (127)
.++.|+++ .+|. |+|.|-.-+| +.|.|+|.+
T Consensus 93 ~svtf~~~~l~~G~~Y~f~C~~pgH~~gM~G~i~V~~ 129 (129)
T 2ccw_A 93 DSVTFDVSKIAAGENYAYFCSFPGHWAMMKGTLKLGS 129 (129)
T ss_dssp EEEEEEGGGSCTTCCEEEECCSTTGGGTSEEEEEECC
T ss_pred EEEEEeccccCCCceEEEEeCCCChhHcCEEEEEEeC
Confidence 99999997 7765 9999976554 499999853
No 101
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=98.38 E-value=1.9e-06 Score=58.89 Aligned_cols=88 Identities=9% Similarity=-0.011 Sum_probs=55.8
Q ss_pred CCCCCeEEE-ecCCEEEEEEEcCCCCCc-----eEEEEeeeee------ecCC---CCC----CCcc-c-ceeeeCCCCE
Q psy16567 34 QLPGPSIQV-CKGDTIIVDVKNHMIDRE-----VTLHWHGVYQ------KVTP---WMD----GVPM-V-TQCPIPSSTT 92 (127)
Q Consensus 34 ~~pgP~i~v-~~Gd~v~v~~~N~~~~~~-----~siH~HG~~~------~~~~---~~D----G~~~-~-~~~~i~PG~~ 92 (127)
+|-...|.| +.|++|+|+|+|... .+ |.+-+-.... .... .++ +.+. + ....|.||++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~-~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet 92 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGS-LPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEK 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSS-CCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCE
T ss_pred cEecCEEEEecCCCEEEEEEEECCC-CcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCE
Confidence 344567999 999999999999876 43 5544321100 0000 000 0000 0 0114799999
Q ss_pred EEEEEeCC--Ccee-eEEccCCCCC---ceeeEEEE
Q psy16567 93 FRYKFPAM--PSGT-FFYHSHVDRR---PYCPEIEE 122 (127)
Q Consensus 93 ~~y~~~~~--~~Gt-~~yH~H~~~~---~~g~liV~ 122 (127)
.++.|.+. .+|+ |+|.|-+-+| +.|.|+|.
T Consensus 93 ~svtf~~~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 128 (128)
T 1nwp_A 93 DSVTFDVSKLAAGEKYGFFCSFPGHISMMKGTVTLK 128 (128)
T ss_dssp EEEEEEGGGSCTTSCEEEECCSTTCGGGSEEEEEEC
T ss_pred EEEEEeccccCCCceEEEEECCCChhHCCEEEEEEC
Confidence 99999997 7876 9999976554 48888873
No 102
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=98.10 E-value=5.8e-05 Score=51.81 Aligned_cols=72 Identities=10% Similarity=0.158 Sum_probs=52.6
Q ss_pred CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCceeeEEccC-----C
Q psy16567 37 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSH-----V 111 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H-----~ 111 (127)
...|.++.|++|++.++|.. .. |++..+. .|. ..-+.||+..++.|+++++|+|.|.|. .
T Consensus 59 P~~l~Vp~G~~V~~~vts~D--V~-----Hsf~ip~----~~~----k~d~~PG~~~~~~~~~~~~G~y~~~C~e~CG~~ 123 (135)
T 2cua_A 59 PNPIEVPQGAEIVFKITSPD--VI-----HGFHVEG----TNI----NVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLG 123 (135)
T ss_dssp SSSEEEETTSEEEEEEEBSS--SC-----EEEEETT----SSC----EEEECBTBCEEEEEECCSCEEEEEECCSCCSTT
T ss_pred CCEEEEcCCCEEEEEEEeCC--cc-----ceEEecC----CCc----eeEeCCCCcEEEEEEcCCCEEEEEECcccCCCC
Confidence 35799999999999999963 33 4554432 111 123689999999999999999999993 3
Q ss_pred CCCceeeEEEEc
Q psy16567 112 DRRPYCPEIEEK 123 (127)
Q Consensus 112 ~~~~~g~liV~d 123 (127)
+..+.|.++|.+
T Consensus 124 H~~M~g~v~V~~ 135 (135)
T 2cua_A 124 HQNMFGTIVVKE 135 (135)
T ss_dssp STTCEEEEEEEC
T ss_pred cCCCEEEEEEEC
Confidence 445588888753
No 103
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.95 E-value=9e-05 Score=50.41 Aligned_cols=86 Identities=10% Similarity=0.013 Sum_probs=52.9
Q ss_pred CCCCeEEEec-CCEEEEEEEcCCCCCc-----eEEEEe-----------eeeee-cCCCC-CCCccc--ceeeeCCCCEE
Q psy16567 35 LPGPSIQVCK-GDTIIVDVKNHMIDRE-----VTLHWH-----------GVYQK-VTPWM-DGVPMV--TQCPIPSSTTF 93 (127)
Q Consensus 35 ~pgP~i~v~~-Gd~v~v~~~N~~~~~~-----~siH~H-----------G~~~~-~~~~~-DG~~~~--~~~~i~PG~~~ 93 (127)
|-...|.|++ |++|+|+|+|... .+ |.+=+= |+... ...+. .+-+.+ ....|.||++.
T Consensus 15 F~p~~i~V~~~Ge~V~~~l~N~G~-~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 15 FNTNAITVDKSCKQFTVNLSHPGN-LPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp BSCSEEEECTTCSEEEEEEECCSS-CCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EecCEEEEecCCCEEEEEEEECCc-ccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 4457799986 9999999999986 43 444221 01000 00000 011111 11237999999
Q ss_pred EEEEeCC---CceeeEEccCCCCCceeeEEE
Q psy16567 94 RYKFPAM---PSGTFFYHSHVDRRPYCPEIE 121 (127)
Q Consensus 94 ~y~~~~~---~~Gt~~yH~H~~~~~~g~liV 121 (127)
+..|++. ++|+|.|.|..+..+.|.|+|
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~gH~~M~G~v~V 124 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCAAHAAMKGTLTL 124 (125)
T ss_dssp EEEEEGGGC---CCEEEECSSSTTCEEEEEE
T ss_pred EEEEeCcCcCCCccEEEEcCCCCCcEEEEEE
Confidence 9999987 899999999733345888887
No 104
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=97.83 E-value=0.00021 Score=50.90 Aligned_cols=82 Identities=11% Similarity=0.163 Sum_probs=56.9
Q ss_pred EEEEECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCceeeE
Q psy16567 27 AILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFF 106 (127)
Q Consensus 27 ~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~~ 106 (127)
++...+-.+-...|.++.|++|++.++|. + .. |++..+.. |. +.-+.||+.-++.|.++++|+|+
T Consensus 82 ~m~a~~~~f~Pn~l~VP~G~~Vr~~vTS~-D-Vi-----Hsf~IP~l----gi----k~da~PG~~n~~~~~~~kpG~y~ 146 (168)
T 3s8f_B 82 YVLAFAFGYQPNPIEVPQGAEIVFKITSP-D-VI-----HGFHVEGT----NI----NVEVLPGEVSTVRYTFKRPGEYR 146 (168)
T ss_dssp EEEEETTEEESSSEEEETTSEEEEEEECS-S-SC-----EEEEETTS----SC----EEEECTTBCEEEEEECCSCEEEE
T ss_pred EEEEEeceEecCEEEEeCCCeEEEEEecC-C-ce-----EEEEECCC----Ce----EEEecCCceeEEEEEeCCCEEEE
Confidence 33333333334679999999999999996 3 44 44444321 11 11367999999999999999999
Q ss_pred EccCC-----CCCceeeEEEEc
Q psy16567 107 YHSHV-----DRRPYCPEIEEK 123 (127)
Q Consensus 107 yH~H~-----~~~~~g~liV~d 123 (127)
+.|.- ...+.|-++|++
T Consensus 147 g~Cse~CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 147 IICNQYCGLGHQNMFGTIVVKE 168 (168)
T ss_dssp EECCSCCSTTGGGCEEEEEEEC
T ss_pred EECCcCCCCCcCCCEEEEEEeC
Confidence 99973 223488888874
No 105
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=94.02 E-value=0.23 Score=36.18 Aligned_cols=58 Identities=16% Similarity=0.096 Sum_probs=44.2
Q ss_pred CeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCceeeEEccC
Q psy16567 38 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSH 110 (127)
Q Consensus 38 P~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H 110 (127)
..|.+..|+.|++.+++.. .- |++.++.. | + +.-+-||..-...|.++++|+|+..|.
T Consensus 41 n~l~lP~g~~V~~~lTS~D--Vi-----HSF~IP~l----g---v-K~daiPGr~n~l~~~~~~pG~y~g~Cs 98 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNS--VM-----HSFFIPRL----G---S-QIYAMAGMQTRLHLIANEPGTYDGICA 98 (205)
T ss_dssp SEEEEETTSCEEEEEEESS--SC-----EEEEEGGG----T---E-EEEECTTCCEEEEECCSSSEEEEEEEC
T ss_pred ceEEEeCCCEEEEEEecCC--ce-----eeEEeccc----C---c-EEEecCCceEEEEEEeCCCeEEEEEcc
Confidence 4599999999999999864 23 56555431 1 1 122679999999999999999999995
No 106
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=91.58 E-value=0.99 Score=33.84 Aligned_cols=59 Identities=20% Similarity=0.169 Sum_probs=44.1
Q ss_pred CeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCceeeEEccCC
Q psy16567 38 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV 111 (127)
Q Consensus 38 P~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H~ 111 (127)
..|.+..|+.|++.+++.. .- |+...+.. | + +.-+-||+.-...|.++++|+|...|.-
T Consensus 171 n~l~lP~g~~v~~~~tS~D--Vi-----Hsf~ip~l----~---~-k~da~PG~~n~~~~~~~~~G~y~g~Cse 229 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD--VI-----HSWTVPAF----G---V-KQDAVPGRLAQLWFRAEREGIFFGQCSE 229 (262)
T ss_dssp SCEEEETTSEEEEEEEESS--SC-----EEEEEGGG----T---E-EEEECBTCCEEEEEECCSCEEEEECCCS
T ss_pred ceEEEecCCEEEEEEEECc--cc-----ceeeeccc----C---c-eEEecCCceeEEEEecCCcEEEEEEChH
Confidence 3599999999999999864 33 55555421 1 1 1125789999999999999999999963
No 107
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=91.14 E-value=1.2 Score=34.10 Aligned_cols=59 Identities=15% Similarity=0.135 Sum_probs=44.1
Q ss_pred CeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCceeeEEccCC
Q psy16567 38 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV 111 (127)
Q Consensus 38 P~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H~ 111 (127)
..|.+..|+.|++.+++.. .- |+...+.. |. +.-+-||..-...|.++++|+|...|.-
T Consensus 189 N~lvlP~g~~V~~~ltS~D--Vi-----Hsf~iP~l----g~----k~daiPG~~n~~~~~~~~~G~y~g~CsE 247 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD--VI-----HAWTIPAF----AV----KQDAVPGRIAQLWFSVDQEGVYFGQCSE 247 (298)
T ss_dssp SCEEEESSSEEEEEEEESS--SC-----EEEEEGGG----TE----EEEECTTCCEEEEEECSSSEEEEECCCS
T ss_pred ceEEEEcCCEEEEEEEeCC--cc-----ceeeEccc----Cc----eEEecCCceEEEEEEeCCCEEEEEEccc
Confidence 4699999999999999864 33 55554321 11 1125789999999999999999999963
No 108
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=87.28 E-value=4.7 Score=26.67 Aligned_cols=36 Identities=11% Similarity=0.129 Sum_probs=26.6
Q ss_pred CCCCCcc---cceeeeCCCCEEEEEEeCC---CceeeEEccC
Q psy16567 75 WMDGVPM---VTQCPIPSSTTFRYKFPAM---PSGTFFYHSH 110 (127)
Q Consensus 75 ~~DG~~~---~~~~~i~PG~~~~y~~~~~---~~Gt~~yH~H 110 (127)
|+|+..+ .....++||++.+|+...+ .||+|..+.-
T Consensus 59 wS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Ytl~a~ 100 (120)
T 3isy_A 59 YSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYEVKVT 100 (120)
T ss_dssp TTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEEEEEEE
T ss_pred ccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccEEEEEE
Confidence 5777544 3344689999999999886 4799987653
No 109
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=86.57 E-value=2.8 Score=30.65 Aligned_cols=59 Identities=10% Similarity=0.001 Sum_probs=43.8
Q ss_pred CeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCceeeEEccCC
Q psy16567 38 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV 111 (127)
Q Consensus 38 P~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H~ 111 (127)
..+.+..|+.|++.++... .- |+...+.. |. .. -.-||+.-...|.++++|+|...|.-
T Consensus 140 n~lvlP~~~~Vr~~vtS~D--Vi-----Hsf~vP~l----g~---K~-DaiPGr~n~~~~~~~~~G~y~g~Cse 198 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED--VL-----HSWAVPSL----GL---KT-DAIPGRLNQTTLMSSRPGLYYGQCSE 198 (227)
T ss_dssp SCEEEETTSCEEEEEEESS--SC-----EEEEEGGG----TE---EE-EECTTCCEEEEECCSSCEEEEECCCS
T ss_pred ceEEEecCCEEEEEEEeCc--cc-----ceeeeccc----Cc---EE-EecCCceEEEEEecCCcEEEEEEehh
Confidence 5699999999999999854 33 55544321 11 11 25789999999999999999999963
No 110
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=84.75 E-value=2.7 Score=28.13 Aligned_cols=60 Identities=20% Similarity=0.296 Sum_probs=35.8
Q ss_pred eEEEecC-CEEEEEEEcCCCCCceEE--EEeeeeeecCCCCC-----C----CcccceeeeCCCCEEEEEEeC
Q psy16567 39 SIQVCKG-DTIIVDVKNHMIDREVTL--HWHGVYQKVTPWMD-----G----VPMVTQCPIPSSTTFRYKFPA 99 (127)
Q Consensus 39 ~i~v~~G-d~v~v~~~N~~~~~~~si--H~HG~~~~~~~~~D-----G----~~~~~~~~i~PG~~~~y~~~~ 99 (127)
.|.+++| ++++|++.|..+ .+.-+ |+|=.........| | .|.-+..-.+||++++..+..
T Consensus 18 ~I~lN~gr~~~~l~V~NtGD-RPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~ 89 (126)
T 4ac7_B 18 EIEINAGREKTTIRVSNTGD-RPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTE 89 (126)
T ss_dssp EEETTTTSCEEEEEEEECSS-SCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCC-CCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEE
Confidence 3777777 689999999998 77666 44432221111111 1 011122236899999999874
No 111
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=84.75 E-value=2.7 Score=28.13 Aligned_cols=60 Identities=20% Similarity=0.296 Sum_probs=35.8
Q ss_pred eEEEecC-CEEEEEEEcCCCCCceEE--EEeeeeeecCCCCC-----C----CcccceeeeCCCCEEEEEEeC
Q psy16567 39 SIQVCKG-DTIIVDVKNHMIDREVTL--HWHGVYQKVTPWMD-----G----VPMVTQCPIPSSTTFRYKFPA 99 (127)
Q Consensus 39 ~i~v~~G-d~v~v~~~N~~~~~~~si--H~HG~~~~~~~~~D-----G----~~~~~~~~i~PG~~~~y~~~~ 99 (127)
.|.+++| ++++|++.|..+ .+.-+ |+|=.........| | .|.-+..-.+||++++..+..
T Consensus 18 ~I~lN~gr~~~~l~V~NtGD-RPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV~ 89 (126)
T 4ubp_B 18 EIEINAGREKTTIRVSNTGD-RPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELTE 89 (126)
T ss_dssp EEETTTTSCEEEEEEEECSS-SCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCC-CCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEEE
Confidence 3777777 689999999998 77666 44432221111111 1 011122236899999999874
No 112
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=78.47 E-value=3.2 Score=31.91 Aligned_cols=58 Identities=14% Similarity=0.065 Sum_probs=42.6
Q ss_pred CeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCceeeEEccC
Q psy16567 38 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSH 110 (127)
Q Consensus 38 P~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H 110 (127)
..|.+..|+.|++.++... .- |++..+.. | +. .-+-||..-...|.++++|+|...|.
T Consensus 151 n~l~lP~g~~V~~~lTS~D--Vi-----Hsf~IP~l----g---~k-~DaiPGr~n~~~~~~~~~G~y~g~Cs 208 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSNS--VM-----NSFFIPRL----G---SQ-IYAMAGMQTRLHLIANEPGTYDGISA 208 (315)
T ss_dssp SBCCCCSSSEEEEEECBSS--SC-----EEEEEGGG----T---EE-EEECBTSCEEEEEECCSCBCCEEBCC
T ss_pred ceEEEeCCCEEEEEEEeCC--cc-----ceeeeccc----C---cE-EeecCCcceeeEEecCCCeEEEEecc
Confidence 4588999999999998753 33 55554321 1 11 12578999999999999999999995
No 113
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=76.09 E-value=1.4 Score=35.20 Aligned_cols=46 Identities=9% Similarity=0.206 Sum_probs=32.4
Q ss_pred CCCCCcccceeeeCCCCEEEEEEeC--CCceeeEEccCCCCCceeeEE
Q psy16567 75 WMDGVPMVTQCPIPSSTTFRYKFPA--MPSGTFFYHSHVDRRPYCPEI 120 (127)
Q Consensus 75 ~~DG~~~~~~~~i~PG~~~~y~~~~--~~~Gt~~yH~H~~~~~~g~li 120 (127)
|..|.+......+..|+.+.|+..+ ..||+|.-|.-++....|++|
T Consensus 100 ~ing~p~~~s~~l~~G~~Y~fki~lkaR~PG~~HVH~~lNV~~~Gp~i 147 (419)
T 3rfr_A 100 FIGEQFAPRSVSLEIGKDYAFSINLRGRRAGRWHVHAQINVEGGGPII 147 (419)
T ss_dssp EETTEECSSCBCCCTTCEEEEEEEEEECSCEEEEEEEEEEETTTEEEE
T ss_pred hhcCcCCcceEEecCCCeEeEEEEEecccCcccccceeEeeccCCCCc
Confidence 4445444333458899999998876 689999888876666566654
No 114
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=74.52 E-value=7.5 Score=25.02 Aligned_cols=60 Identities=23% Similarity=0.206 Sum_probs=35.7
Q ss_pred eEEEecC-CEEEEEEEcCCCCCceEE--EEeeeeeecCCCCCCC---------cccceeeeCCCCEEEEEEeC
Q psy16567 39 SIQVCKG-DTIIVDVKNHMIDREVTL--HWHGVYQKVTPWMDGV---------PMVTQCPIPSSTTFRYKFPA 99 (127)
Q Consensus 39 ~i~v~~G-d~v~v~~~N~~~~~~~si--H~HG~~~~~~~~~DG~---------~~~~~~~i~PG~~~~y~~~~ 99 (127)
.|.+++| +++++.+.|..+ .+.-+ |.|=.........|-. |.-+..-.+||++++.++..
T Consensus 12 ~I~lN~gr~~~~l~V~NtGD-RPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~r~V~LV~ 83 (101)
T 4ep8_B 12 QIALNTGRATCRVVVENHGD-RPIQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVELVA 83 (101)
T ss_dssp EEECSTTCCEEEEEEEECSS-SCEEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEECTTCEEEEEEEE
T ss_pred cEEEcCCCCEEEEEEEeCCC-cceEEccccChhHcCcceeecHhhccCceecccCCCeEeeCCCCeEEEEEEE
Confidence 3777777 689999999998 77665 4443222111112211 11122236899999999874
No 115
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=74.17 E-value=11 Score=24.69 Aligned_cols=61 Identities=10% Similarity=0.233 Sum_probs=34.6
Q ss_pred CCeEEEecCCEEEEEEE---cCCCCCceEEEEee----eeeecC-CCCCCCcccceeeeCCCCEEEEEEeC
Q psy16567 37 GPSIQVCKGDTIIVDVK---NHMIDREVTLHWHG----VYQKVT-PWMDGVPMVTQCPIPSSTTFRYKFPA 99 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~---N~~~~~~~siH~HG----~~~~~~-~~~DG~~~~~~~~i~PG~~~~y~~~~ 99 (127)
.+.=.+++|+.+.|.+. |... .......++ +..+-. ...|+= ....||+.+|+.++|.+..
T Consensus 24 ~~pC~l~rG~~~~i~~~f~~~~~~-~~l~~~v~~~~~g~~ip~p~~~~daC-~~~~CPl~~G~~~~y~~~~ 92 (129)
T 1xwv_A 24 SDPCIIHRGKPFTLEALFDANQNT-KTAKIEIKASLDGLEIDVPGIDTNAC-HFMKCPLVKGQQYDAKYTW 92 (129)
T ss_dssp TSCEEEETTSEEEEEEEEECCSCB-SCCEEEEEEEETTEEECCCSCCCBGG-GTSCSSBCTTCEEEEEEEE
T ss_pred CCCCEEeCCCeEEEEEEEECCCcc-ceEEEEEEEEEcCEEeecCCCCCCcc-CCccCcccCCEEEEEEEEe
Confidence 34557888988877776 2221 233333333 333211 112322 2367899999999999765
No 116
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=74.13 E-value=6.9 Score=31.18 Aligned_cols=15 Identities=7% Similarity=-0.062 Sum_probs=13.6
Q ss_pred eeCCCCEEEEEEeCC
Q psy16567 86 PIPSSTTFRYKFPAM 100 (127)
Q Consensus 86 ~i~PG~~~~y~~~~~ 100 (127)
||.|||+++....++
T Consensus 353 pI~PGETrt~~V~a~ 367 (419)
T 3rfr_A 353 VIAPGESKEIVVKIQ 367 (419)
T ss_dssp CBCTTCEEEEEEEEE
T ss_pred CcCCCcceEEEEEee
Confidence 899999999998874
No 117
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=71.24 E-value=14 Score=23.98 Aligned_cols=67 Identities=9% Similarity=-0.001 Sum_probs=36.9
Q ss_pred CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcc----c----ceeeeCCCCEEEEEEeCCCcee
Q psy16567 37 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM----V----TQCPIPSSTTFRYKFPAMPSGT 104 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~----~----~~~~i~PG~~~~y~~~~~~~Gt 104 (127)
+-+|+++.||++.|.|.-+-. ......+....-......+|... . ....+..|....+.|.+..+|+
T Consensus 14 ~~~i~~~~Ge~~~I~L~~NPt-TGY~W~~~~~~~~~~l~~~gl~~~s~y~~~~~~~~~vG~gG~~~~~f~a~~~G~ 88 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGNPT-TGYMWTRVGFVGKDVLSDEILEVVCKYTPTPSSTPMVGVGGIYVVLVKPRKRGH 88 (116)
T ss_dssp CCCEEECSSCCEEEEEECCTT-SSCEEEETTCTTSSCCCCSSEEEEEEEECCCCSSSSSCCCCEEEEEEEECSSSS
T ss_pred CcEEEEcCCCEEEEEeCCCCC-CCcEEEEecCCCcccccccccEEEEeEEeCCCCCCCcCCCceEEEEEEEeCCce
Confidence 468999999999999985433 33333333210000000111100 0 0112567889999999988873
No 118
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=70.97 E-value=8.1 Score=25.74 Aligned_cols=50 Identities=16% Similarity=0.120 Sum_probs=25.9
Q ss_pred EEEEEEcCCCCCce---EEEEeeeeeecCC---CCCCCcccceeeeCCCCEEEEEEeC
Q psy16567 48 IIVDVKNHMIDREV---TLHWHGVYQKVTP---WMDGVPMVTQCPIPSSTTFRYKFPA 99 (127)
Q Consensus 48 v~v~~~N~~~~~~~---siH~HG~~~~~~~---~~DG~~~~~~~~i~PG~~~~y~~~~ 99 (127)
.+|++.|... .+. +=||.=.+..+.- .-+|+-+ .+..|.||++|+|.=-.
T Consensus 33 Y~I~I~N~~~-~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-~qP~L~PGe~f~YtSg~ 88 (127)
T 2f1e_A 33 YSIRIQNAGA-VPARLVARHWQITDGNGRTEQVDGEGVVG-EQPWLRPGEAFHYTSGV 88 (127)
T ss_dssp EEEEEEECSS-SCEEEEEEEEEEEETTSCEEEEEESSBTT-BCCEECTTCEEEEEEEE
T ss_pred EEEEEEeCCC-CCEEEEeceEEEEeCCCCEEEEECCCeec-CCCcCCCCCceEEeCCc
Confidence 4688888876 332 2355433211000 0123311 24457999998887543
No 119
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=70.52 E-value=7.4 Score=25.94 Aligned_cols=50 Identities=20% Similarity=0.212 Sum_probs=25.3
Q ss_pred EEEEEEcCCCCCce---EEEEeeeeeecCC---CCCCCcccceeeeCCCCEEEEEEeC
Q psy16567 48 IIVDVKNHMIDREV---TLHWHGVYQKVTP---WMDGVPMVTQCPIPSSTTFRYKFPA 99 (127)
Q Consensus 48 v~v~~~N~~~~~~~---siH~HG~~~~~~~---~~DG~~~~~~~~i~PG~~~~y~~~~ 99 (127)
.+|++.|... .+. +=||.=.+..+.- .-+|+- -.+..|.||++|+|.=-.
T Consensus 32 Y~I~I~N~~~-~~vQL~sRhW~Itd~~g~~~eV~G~GVV-G~qP~L~PGe~f~YtSg~ 87 (126)
T 1xvs_A 32 YLITIKNLSS-QTVQLMSRRWLITDADGKQTVVEGDGVV-GEQPRIKANDEYTYSSGT 87 (126)
T ss_dssp EEEEEEECSS-SCEEEEEEEEEEEETTCCEEEEEEESBT-TBCCEECTTCEEEEEEEE
T ss_pred EEEEEEECCC-CCEEEEecEEEEEeCCCCEEEEECCceE-cCCCcCCCCCceEEeCCc
Confidence 4678888776 332 2255432211000 012221 124457999988887643
No 120
>1e9y_A Urease subunit alpha; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=65.59 E-value=23 Score=26.06 Aligned_cols=80 Identities=21% Similarity=0.303 Sum_probs=44.9
Q ss_pred eEeecCCceEEEEEE-------CCCCCCCe------EEEecC-CEEEEEEEcCCCCCceEE--EEeeeeeecCCCCC---
Q psy16567 17 GCVTADGFERAILSI-------NRQLPGPS------IQVCKG-DTIIVDVKNHMIDREVTL--HWHGVYQKVTPWMD--- 77 (127)
Q Consensus 17 ~~v~~~G~~~~~~~~-------ng~~pgP~------i~v~~G-d~v~v~~~N~~~~~~~si--H~HG~~~~~~~~~D--- 77 (127)
+...+||.. +.++ +|.+||.. |.++.| +++++.+.|..+ .|.-+ |+|=+........|
T Consensus 84 EatFpDGTk--LVTVh~PI~~~~gmiPGei~~~~g~I~lN~gr~~~~l~V~NtGD-RPIQVGSHyHF~E~N~aL~FDR~~ 160 (238)
T 1e9y_A 84 EAMFPDGTK--LVTVHTPIEANGKLVPGELFLKNEDITINEGKKAVSVKVKNVGD-RPVQIGSHFHFFEVNRCLDFDREK 160 (238)
T ss_dssp EEEETTEEE--EEEEECCSCCCSSCCTTCEECCSCEEETTTTCCCCEEEEEECSS-SCEEEETTSCGGGSCTTEESCGGG
T ss_pred EEEcCCCCE--EEEeecCCCcccCCCCCeEEcCCCCeeeCCCCCeEEEEEEeCCC-CceEeccccchHhcCccccccHHH
Confidence 456678743 2222 34456643 556666 488999999998 77665 44433221111112
Q ss_pred --C----CcccceeeeCCCCEEEEEEeC
Q psy16567 78 --G----VPMVTQCPIPSSTTFRYKFPA 99 (127)
Q Consensus 78 --G----~~~~~~~~i~PG~~~~y~~~~ 99 (127)
| .|.-+..-..||++++..+..
T Consensus 161 A~G~RLdIpAGTAVRFEPG~~r~V~LV~ 188 (238)
T 1e9y_A 161 TFGKRLDIAAGTAVRFEPGEEKSVELID 188 (238)
T ss_dssp GTTEEECSSTTCEEEECTTCEEEEEEEE
T ss_pred hCCcccCcCCCCeEeeCCCCeeEEEEEE
Confidence 1 011122236899999999875
No 121
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=65.34 E-value=21 Score=23.37 Aligned_cols=63 Identities=22% Similarity=0.334 Sum_probs=36.0
Q ss_pred CCeEEEecCCEEEEEEE---cCCCCCceEEEEee----eeeec-CCCCCCCcccceeeeCCCCEEEEEEeCC
Q psy16567 37 GPSIQVCKGDTIIVDVK---NHMIDREVTLHWHG----VYQKV-TPWMDGVPMVTQCPIPSSTTFRYKFPAM 100 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~---N~~~~~~~siH~HG----~~~~~-~~~~DG~~~~~~~~i~PG~~~~y~~~~~ 100 (127)
.+.=.+++|+.+.|.+. |... ......+|+ +..+- ....|+=.....||+.+|+.++|.+.+.
T Consensus 25 ~~PC~l~rG~~~~i~i~f~~~~~~-~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 25 TQPCKLHRGQSYSVNVTFTSNTQS-QSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp SSSEEEETTCEEEEEEEEEESSCB-SCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred CCCCEEEcCCeEEEEEEEEccccc-ceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 35567888998887776 3222 223334444 33321 1113332112579999999999987653
No 122
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=64.26 E-value=9.1 Score=25.79 Aligned_cols=50 Identities=20% Similarity=0.206 Sum_probs=25.3
Q ss_pred EEEEEEcCCCCCce---EEEEeeeeeecCC---CCCCCcccceeeeCCCCEEEEEEeC
Q psy16567 48 IIVDVKNHMIDREV---TLHWHGVYQKVTP---WMDGVPMVTQCPIPSSTTFRYKFPA 99 (127)
Q Consensus 48 v~v~~~N~~~~~~~---siH~HG~~~~~~~---~~DG~~~~~~~~i~PG~~~~y~~~~ 99 (127)
.+|++.|... .+. +=||.=.+..+.- .-+|+- -.+..|.||++|+|.=-.
T Consensus 32 Y~ItI~N~~~-~~vQL~sRhW~Itd~~g~~~eV~G~GVV-GeqP~L~PGe~F~YtSg~ 87 (134)
T 1tza_A 32 YTITIINLGE-QAAKLETRHWIITDANGKTSEVQGAGVV-GETPTIPPNTAYQYTSGT 87 (134)
T ss_dssp EEEEEEECSS-SCEEEEEEEEEEEETTSCEEEEEEESBT-TBCCEECTTEEEEEEEEE
T ss_pred EEEEEEeCCC-CCEEEEecEEEEEeCCCCEEEEEcCceE-cCCCcCCCCCceEEcCCc
Confidence 4688888876 332 2255432211000 012221 124457999988887643
No 123
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=62.47 E-value=2.4 Score=33.44 Aligned_cols=33 Identities=12% Similarity=0.290 Sum_probs=24.6
Q ss_pred eeCCCCEEEEEEeC--CCceeeEEccCCCCCceee
Q psy16567 86 PIPSSTTFRYKFPA--MPSGTFFYHSHVDRRPYCP 118 (127)
Q Consensus 86 ~i~PG~~~~y~~~~--~~~Gt~~yH~H~~~~~~g~ 118 (127)
.+..|+.+.|+..+ ..||+|.-|.-++....|+
T Consensus 83 ~le~G~~Y~fki~lkAR~PG~~HVH~~lNV~~~GP 117 (382)
T 1yew_A 83 RLEIGKTYDFRVVLKARRPGDWHVHTMMNVQGGGP 117 (382)
T ss_dssp CCCTTCEEEEEEEEEECSCEEEEEEEEEEESSSCB
T ss_pred EecCCCeEeEEEEEecccCccccceeeEeecCCCC
Confidence 47899999888876 6899998887654444443
No 124
>2wgn_B Inhibitor of cysteine peptidase compnd 3; hydrolase inhibitor, dynamics, peptidase inhibitor, cathepsi hydrolase inhibitor; NMR {Pseudomonas aeruginosa}
Probab=61.31 E-value=33 Score=22.76 Aligned_cols=70 Identities=10% Similarity=0.112 Sum_probs=38.3
Q ss_pred CCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecC-CCCCCC--cc-cceeeeCCCCEEEEEEeCCCcee
Q psy16567 34 QLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVT-PWMDGV--PM-VTQCPIPSSTTFRYKFPAMPSGT 104 (127)
Q Consensus 34 ~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~-~~~DG~--~~-~~~~~i~PG~~~~y~~~~~~~Gt 104 (127)
.--+-+|+++.||++.|.|.-+-. ......+....-... .-.+-. +. .....+..|....+.|++.++|+
T Consensus 31 ~~~g~tI~v~~Ge~~~I~L~~NPT-TGY~W~~~~~~~~vl~~l~~~~y~~~~~~~~~vGagG~~~w~f~A~~~G~ 104 (132)
T 2wgn_B 31 ADDCSPLKLTQGQELVLTLPSNPT-TGFRWELRNPAASVLKRLGPEVYSNSEEDSGLVGSGGESTWRFRVAASGD 104 (132)
T ss_dssp SSCCSCEEECTTCEEEEEECCCTT-TSCEEEEEECCTTTEEECCSCCSCSSCSSCCCSSSSCCEEEEEEECSCEE
T ss_pred ccCCcEEEEcCCCEEEEEeCCCCC-CCeEEEEecCCCceEEecccceecCCCCccCCcCCCceEEEEEEEcCCce
Confidence 334667999999999999974332 233333322110000 000110 00 01223667888999999998884
No 125
>2cio_B Inhibitor of cysteine peptidase; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Trypanosoma brucei}
Probab=59.25 E-value=34 Score=22.24 Aligned_cols=65 Identities=14% Similarity=0.199 Sum_probs=36.4
Q ss_pred CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCC--------cccce--------eeeCCCCEEEEEEeCC
Q psy16567 37 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGV--------PMVTQ--------CPIPSSTTFRYKFPAM 100 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~--------~~~~~--------~~i~PG~~~~y~~~~~ 100 (127)
+-+|.++.||++.|.|.-+-. ......+.+..-.. -.||. +.... ..+..|....+.|.+.
T Consensus 12 ~~ti~l~~Ge~~~I~L~~NPt-TGY~W~~~~~~~~~--l~~~~~~v~~~y~~~~~~~~~~~~~~~~vG~gG~~~~~fka~ 88 (121)
T 2cio_B 12 NKTIRMVIGETFTIELESNPT-TGYTWLRSGLAGTE--LSDCTFAIQSKFNNRAPHDNHKNHRRLLVGAGGTMVLEVKAL 88 (121)
T ss_pred CcEEEEcCCCEEEEEeCCCCC-CCeEEEEecCcccc--CCCccEEEeeeEEcCCCCcccccccccEeCCCceEEEEEEEe
Confidence 456999999999999974333 23333333310000 01110 00000 0367788899999998
Q ss_pred Ccee
Q psy16567 101 PSGT 104 (127)
Q Consensus 101 ~~Gt 104 (127)
.+|+
T Consensus 89 ~~G~ 92 (121)
T 2cio_B 89 KAGK 92 (121)
T ss_pred cCce
Confidence 8884
No 126
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=58.72 E-value=22 Score=26.01 Aligned_cols=81 Identities=17% Similarity=0.231 Sum_probs=45.3
Q ss_pred ceEeecCCceEEEEEE------CCCCCCCe-------EEEecC-CEEEEEEEcCCCCCceEE--EEeeeeeecCCCCC--
Q psy16567 16 KGCVTADGFERAILSI------NRQLPGPS-------IQVCKG-DTIIVDVKNHMIDREVTL--HWHGVYQKVTPWMD-- 77 (127)
Q Consensus 16 ~~~v~~~G~~~~~~~~------ng~~pgP~-------i~v~~G-d~v~v~~~N~~~~~~~si--H~HG~~~~~~~~~D-- 77 (127)
-+...+||.. ..++ ....||.. |.++.| +++++.+.|..+ .|.-+ |+|=+........|
T Consensus 83 VEatFpDGTk--LVTVh~PI~~~~~~PGei~~~~~g~I~lN~gr~~~~l~V~NtGD-RPIQVGSHyHF~E~N~aL~FDR~ 159 (225)
T 3qga_A 83 VEANFPDGTK--LVTVNWPIEPDDFKAGEIKFASDKDIELNAGKEITELKVTNKGP-KSLHVGSHFHFFEANRALEFDRE 159 (225)
T ss_dssp EEEEETTEEE--EEEEESCBCCCSCCTTCEECSCSCCEETTTTCCCEEEEEEECSS-SCEEEETTSCGGGSCTTEESCGG
T ss_pred eeEEcCCCCE--EEEeccCccCCCCCCCeEeccCCCceecCCCCceEEEEEEECCC-CceeeccccchhhcCchhhccHH
Confidence 3455677743 2222 22356655 666777 589999999998 77666 44422221111111
Q ss_pred ---C----CcccceeeeCCCCEEEEEEeC
Q psy16567 78 ---G----VPMVTQCPIPSSTTFRYKFPA 99 (127)
Q Consensus 78 ---G----~~~~~~~~i~PG~~~~y~~~~ 99 (127)
| .|.-+..-..||++++..+..
T Consensus 160 ~A~G~RLdIpAGTavRFEPG~~k~V~LV~ 188 (225)
T 3qga_A 160 KAYGKRLDIPSGNTLRIGAGETKTVHLIP 188 (225)
T ss_dssp GGTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred HhCCcccccCCCCeEeeCCCCeeEEEEEE
Confidence 1 011122236899999999874
No 127
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=55.70 E-value=30 Score=22.94 Aligned_cols=65 Identities=11% Similarity=0.170 Sum_probs=36.0
Q ss_pred CCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCc-----c--cceeeeCCCCEEEEEEeCCCcee
Q psy16567 37 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVP-----M--VTQCPIPSSTTFRYKFPAMPSGT 104 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~-----~--~~~~~i~PG~~~~y~~~~~~~Gt 104 (127)
+-+|+++.||++.|.|.-+-. ......+....- ..-.|+.. . .....+..|....+.|.+.++|+
T Consensus 32 ~~~I~v~~Ge~~~I~L~~NPT-TGY~W~~~~~~~--~~L~~~~~~v~~~y~p~~~~~vGagG~~~w~f~A~~~G~ 103 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSNPT-TGFAWYFEGGTK--ESPNESMFTVENKYFPPDSKLLGAGGTEHFHVTVKAAGT 103 (131)
T ss_dssp TCEEEECTTCEEEEEEEECGG-GSCEEEBTTTBS--SCSCTTTEEEEEEEECCTTCCTTCCEEEEEEEEECSSEE
T ss_pred CCEEEEeCCCEEEEEeCCCCC-CCeEEEEecCCC--ccccccceeecceeeeCCCCCcCCCcEEEEEEEEccCce
Confidence 568999999999999984432 222222211100 00011110 0 01113567788999999988884
No 128
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=54.90 E-value=29 Score=23.38 Aligned_cols=50 Identities=20% Similarity=0.139 Sum_probs=25.2
Q ss_pred EEEEEEcCCCCCce---EEEEeeeeeecCC---CCCCCcccceeeeCCCCEEEEEEeC
Q psy16567 48 IIVDVKNHMIDREV---TLHWHGVYQKVTP---WMDGVPMVTQCPIPSSTTFRYKFPA 99 (127)
Q Consensus 48 v~v~~~N~~~~~~~---siH~HG~~~~~~~---~~DG~~~~~~~~i~PG~~~~y~~~~ 99 (127)
.+|++.|... .+. +=||.=.+..+.- .-+|+- -.+..|.||++|+|.=-.
T Consensus 37 Y~ItI~N~~~-~~vQL~sRhW~ItD~~G~~~eV~G~GVV-GeqPvL~PGe~F~YtSg~ 92 (139)
T 1xq4_A 37 YTVRITNTGS-HPAQVISRHWIITDGEERVQEVRGLGVV-GQQPLLAPGETFEYTSGC 92 (139)
T ss_dssp EEEEEEECSS-SCEEEEEEEEEEECTTSCEEEEEEESSS-SCCCEECTTCEEEEEEEE
T ss_pred EEEEEEeCCC-CCEEEEecEEEEEeCCCCEEEEECCCee-cCCCcCCCCCceEEcCCc
Confidence 4688888876 332 2255322211000 012221 124457999988887643
No 129
>4ajy_V VON hippel-lindau disease tumor suppressor; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 3zrc_C 3zrf_C* 3ztc_C* 3zun_C 4awj_C* 1lqb_C 3ztd_C* 4b95_C* 1lm8_V 1vcb_C 4b9k_C*
Probab=53.16 E-value=20 Score=24.91 Aligned_cols=52 Identities=25% Similarity=0.308 Sum_probs=33.8
Q ss_pred CCCCeEEE-ecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEE
Q psy16567 35 LPGPSIQV-CKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYK 96 (127)
Q Consensus 35 ~pgP~i~v-~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~ 96 (127)
-+.|.+|- +-+..+.|+|.|..+ .+.-+-|-. .+|.+ .....+.||+.+...
T Consensus 8 ~~~p~lRS~~S~~~~~V~FvN~s~-~~V~v~WID--------y~G~~-~~Y~tL~PG~~~~~~ 60 (163)
T 4ajy_V 8 RPRPVLRSVNSREPSQVIFCNRSP-RVVLPVWLN--------FDGEP-QPYPTLPPGTGRRIH 60 (163)
T ss_dssp --CCSSCCCCCCCEEEEEEEECSS-SCEEEEEEC--------TTSCE-EECCCBCTTEEEEEE
T ss_pred cCCCcccCCCCCceEEEEEEeCCC-CeEEEEEEC--------CCCCE-EEeeeeCCCCeEEec
Confidence 34455543 446899999999998 788887733 33432 233358999988754
No 130
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=52.38 E-value=7.6 Score=26.18 Aligned_cols=17 Identities=18% Similarity=0.413 Sum_probs=15.4
Q ss_pred EEEecCCEEEEEEEcCC
Q psy16567 40 IQVCKGDTIIVDVKNHM 56 (127)
Q Consensus 40 i~v~~Gd~v~v~~~N~~ 56 (127)
|.|+.|++|++.+.|..
T Consensus 73 InV~~GETVrF~v~nkt 89 (131)
T 2wtp_A 73 VNVDSGETVAFRAGEKI 89 (131)
T ss_dssp EEEETTCEEEEEETTEE
T ss_pred EEecCCCEEEEEeCCcE
Confidence 99999999999998853
No 131
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=51.72 E-value=41 Score=22.08 Aligned_cols=61 Identities=16% Similarity=0.121 Sum_probs=33.7
Q ss_pred EEecCC--EEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCccc-ceeeeCCCCEEEEEEe--CCCceeeEEc
Q psy16567 41 QVCKGD--TIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMV-TQCPIPSSTTFRYKFP--AMPSGTFFYH 108 (127)
Q Consensus 41 ~v~~Gd--~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~-~~~~i~PG~~~~y~~~--~~~~Gt~~yH 108 (127)
.++.|+ ++.+++.|.+. .+.. +..+.- +.||.... ....+.||++.++.|. ...+|+|-.-
T Consensus 28 ~v~~G~~~ti~vtV~N~G~-~~a~----~~~V~l--yvng~~v~t~~v~La~G~s~tv~f~~~~~~~G~~~v~ 93 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGG-IGVP----STKVRV--YINGTLYKNWTVSLGPKEEKVLTFNWTPTQEGMYRIN 93 (127)
T ss_dssp EECTTCCEEEEEEEEECSS-SCEE----EEEEEE--EETTEEEEEEEEEECTTCEEEEEEEECCSSCEEEEEE
T ss_pred cccCCCEEEEEEEEEECCC-CccC----CcEEEE--EECCEEEeeEEeccCCCCeEEEEEEEEcCCCcEEEEE
Confidence 556777 55677789887 3321 222211 24553221 1224889998666665 4567877543
No 132
>2wnv_C C1Q chain C, complement C1Q subcomponent subunit C; immune system, secreted, collagen, recognition, disulfide bond, innate immunity; HET: NAG; 1.25A {Homo sapiens} PDB: 2jg8_C 2wnu_C* 2jg9_C* 1pk6_C
Probab=47.45 E-value=15 Score=24.09 Aligned_cols=16 Identities=13% Similarity=0.300 Sum_probs=14.2
Q ss_pred CeEEEecCCEEEEEEE
Q psy16567 38 PSIQVCKGDTIIVDVK 53 (127)
Q Consensus 38 P~i~v~~Gd~v~v~~~ 53 (127)
-+|.+++||+|.|++.
T Consensus 93 ~~L~L~~GD~V~v~~~ 108 (131)
T 2wnv_C 93 VLLRLQVGEEVWLAVN 108 (131)
T ss_dssp EEEEECTTCEEEEEEE
T ss_pred EEEEECCCCEEEEEEe
Confidence 4689999999999985
No 133
>2yev_B Cytochrome C oxidase subunit 2; electron transport; HET: FME 5PL HAS 4AG 7E8 HEC 7E9; 2.36A {Thermus thermophilus}
Probab=52.69 E-value=4.1 Score=31.34 Aligned_cols=58 Identities=10% Similarity=0.117 Sum_probs=40.5
Q ss_pred CeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCceeeEEccC
Q psy16567 38 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSH 110 (127)
Q Consensus 38 P~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H 110 (127)
..|.+..|+.|++.++... .- |+...+.. |.. .-.-||..-...|.++++|+|...|-
T Consensus 141 n~l~~P~~~~v~~~~ts~D--Vi-----Hsf~vp~~----~~k----~d~~PG~~~~~~~~~~~~G~y~g~c~ 198 (337)
T 2yev_B 141 NELVLPAGVPVELEITSKD--VI-----HSFWVPGL----AGK----RDAIPGQTTRISFEPKEPGLYYGFCA 198 (337)
Confidence 4588899999999988643 23 44444321 111 11568988899999999999998884
No 134
>1lm8_V VHL, VON hippel-lindau disease tumor suppressor; regulation, tumor suppressor, oxygen sensing, transcription; 1.85A {Homo sapiens} SCOP: b.3.3.1 PDB: 1vcb_C 1lqb_C 3zrf_C 3zrc_C
Probab=46.01 E-value=36 Score=23.56 Aligned_cols=49 Identities=24% Similarity=0.322 Sum_probs=33.1
Q ss_pred CeEEEe-cCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEE
Q psy16567 38 PSIQVC-KGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYK 96 (127)
Q Consensus 38 P~i~v~-~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~ 96 (127)
|.++-. -+....|+|.|... .+.-+-| ++ .+|.+ .....+.||+.+...
T Consensus 8 ~~lrS~~s~~~~~V~FvN~s~-~~V~v~W--ID------y~G~~-v~Y~~L~PG~~~~q~ 57 (160)
T 1lm8_V 8 PVLRSVNSREPSQVIFCNRSP-RVVLPVW--LN------FDGEP-QPYPTLPPGTGRRIH 57 (160)
T ss_dssp CSSCCCCCCCEEEEEEEECSS-SCEEEEE--EC------TTSCE-EECCCBCTTEEEEEE
T ss_pred CcccCCCCCceEEEEEEeCCC-CeEEEEE--EC------CCCCE-EEeeeeCCCCEEeCC
Confidence 334433 45789999999998 8888888 22 34443 234458999988754
No 135
>2wnv_A C1Q chain A, complement C1Q subcomponent subunit A; immune system, secreted, collagen, recognition, disulfide bond, innate immunity; HET: NAG; 1.25A {Homo sapiens} PDB: 2jg8_A 2wnu_A* 2jg9_A* 1pk6_A
Probab=45.91 E-value=16 Score=23.97 Aligned_cols=17 Identities=24% Similarity=0.386 Sum_probs=14.8
Q ss_pred CeEEEecCCEEEEEEEc
Q psy16567 38 PSIQVCKGDTIIVDVKN 54 (127)
Q Consensus 38 P~i~v~~Gd~v~v~~~N 54 (127)
-+|.+++||+|.|++..
T Consensus 94 ~~L~L~~GD~V~l~~~~ 110 (134)
T 2wnv_A 94 MVLQLQQGDQVWVEKDP 110 (134)
T ss_dssp EEEEECTTCEEEEEEEE
T ss_pred EEEEECCCCEEEEEEeC
Confidence 56999999999999864
No 136
>2wnv_B C1Q chain B, complement C1Q subcomponent subunit B; immune system, secreted, collagen, recognition, disulfide bond, innate immunity; HET: NAG; 1.25A {Homo sapiens} PDB: 2jg8_B 2wnu_B* 2jg9_B* 1pk6_B
Probab=45.08 E-value=17 Score=24.01 Aligned_cols=17 Identities=6% Similarity=0.397 Sum_probs=14.7
Q ss_pred CeEEEecCCEEEEEEEc
Q psy16567 38 PSIQVCKGDTIIVDVKN 54 (127)
Q Consensus 38 P~i~v~~Gd~v~v~~~N 54 (127)
-+|.+++||+|.|++..
T Consensus 95 ~~L~L~~GD~V~v~~~~ 111 (136)
T 2wnv_B 95 MVLKLEQGENVFLQATD 111 (136)
T ss_dssp EEEEECTTCEEEEEEEE
T ss_pred EEEEECCCCEEEEEEeC
Confidence 46999999999999863
No 137
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=41.31 E-value=52 Score=19.12 Aligned_cols=15 Identities=13% Similarity=0.268 Sum_probs=11.6
Q ss_pred eEEEecCCEEEEEEE
Q psy16567 39 SIQVCKGDTIIVDVK 53 (127)
Q Consensus 39 ~i~v~~Gd~v~v~~~ 53 (127)
-+++.+|+.+++...
T Consensus 5 ~v~~~~G~~v~l~C~ 19 (84)
T 2lu7_A 5 RVRSTPGGDLELVVH 19 (84)
T ss_dssp CEEECTTSCEEEECC
T ss_pred EEEEecCCCEEEEEE
Confidence 378888998888764
No 138
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=41.18 E-value=9.4 Score=24.18 Aligned_cols=24 Identities=17% Similarity=0.094 Sum_probs=19.7
Q ss_pred EEEEECCCCCCCeEEEecCCEEEE
Q psy16567 27 AILSINRQLPGPSIQVCKGDTIIV 50 (127)
Q Consensus 27 ~~~~~ng~~pgP~i~v~~Gd~v~v 50 (127)
....+||++-.+.-.++.||+|+|
T Consensus 59 ~~V~Vng~~v~~d~~L~dGDRVEI 82 (97)
T 2hj1_A 59 NKIGIFSRPIKLTDVLKEGDRIEI 82 (97)
T ss_dssp SEEEEEECSCCTTCBCCTTCEEEE
T ss_pred cEEEEcCEECCCCccCCCCCEEEE
Confidence 367888887667778999999997
No 139
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=41.12 E-value=48 Score=20.86 Aligned_cols=51 Identities=14% Similarity=0.149 Sum_probs=29.7
Q ss_pred EEEEEEEcCCCC--CceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCC--Cce
Q psy16567 47 TIIVDVKNHMID--REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM--PSG 103 (127)
Q Consensus 47 ~v~v~~~N~~~~--~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~--~~G 103 (127)
.++|.|+|-++. ..-.+++-|--.. .+ .......|.||++..+++... .+|
T Consensus 23 ~v~vsf~NPL~~~L~~c~~~vEG~GL~-----~~-~~~~~~~v~pg~~~~~~~~~~P~~~G 77 (102)
T 2xzz_A 23 EVQIVFKNPLPVTLTNVVFRLEGSGLQ-----RP-KILNVGDIGGNETVTLRQSFVPVRPG 77 (102)
T ss_dssp EEEEEEECCSSSCBCSEEEEEEETTTE-----EE-EEEEECCBCTTCEEEEEEEECCCSCS
T ss_pred EEEEEEECCCCCcccCEEEEEECCCCC-----cc-eEEEcCcCCCCCEEEEEEEEecCccc
Confidence 677889999883 1234454442211 11 112223589999998888763 455
No 140
>3m86_A Amoebiasin-2; cysteine protease inhibitor, protease, protein binding; HET: 1PE; 1.65A {Entamoeba histolytica} PDB: 3m88_A
Probab=40.16 E-value=38 Score=21.56 Aligned_cols=66 Identities=8% Similarity=0.062 Sum_probs=35.6
Q ss_pred CCCeEEEecCCEEEEEEEcCCCCCceEEEEeee----eeecCCC-CCCCcccceeeeCCCCEEEEEEeCCCceee
Q psy16567 36 PGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGV----YQKVTPW-MDGVPMVTQCPIPSSTTFRYKFPAMPSGTF 105 (127)
Q Consensus 36 pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~----~~~~~~~-~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~ 105 (127)
-+-+|.++.||++.|.|.=+-. ......+... ......+ .+ + .....+..|....+.|.+..+|+.
T Consensus 14 ~g~~I~v~~Ge~~~I~L~~Npt-TGY~W~~~~~~~~~~l~~~~~~~~--p-~~~~~vG~gG~~~~~f~a~~~G~~ 84 (111)
T 3m86_A 14 DHATLHISFNDLIKIQLRTNPS-TGYAWNIEYPTDTFSLSQDTIKAE--P-HPSGMVGFPSIREIQLKPLKVGTT 84 (111)
T ss_dssp TTCEEEECTTCEEEEEEEECGG-GTCEEEEECCTTTEEEEEEEEEEC--C-CSTTTSSCSEEEEEEEEESSCEEE
T ss_pred CCcEEEEcCCCEEEEEECCCCC-CCeEEEEecCCCcEEEcccceEeC--C-CCCCCCCCCeeEEEEEEEeCCeEE
Confidence 4678999999999999983322 1222221111 0000000 00 0 001125667888999999888853
No 141
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=36.73 E-value=39 Score=26.62 Aligned_cols=60 Identities=23% Similarity=0.115 Sum_probs=41.1
Q ss_pred EEEE-ECCCCCCCeEEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEE
Q psy16567 27 AILS-INRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYK 96 (127)
Q Consensus 27 ~~~~-~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~ 96 (127)
+.+. +||++++-.+.++.|..+...+.-..- .+=.-|.|=+- + -.|+.| .+.||+..+.+
T Consensus 68 r~~~~ing~~~~~s~~le~G~~Y~fki~lkAR-~PG~~HVH~~l--N--V~~~GP-----iiGPG~~v~I~ 128 (382)
T 1yew_A 68 RKESYIGGQLVPRSVRLEIGKTYDFRVVLKAR-RPGDWHVHTMM--N--VQGGGP-----IIGPGKWITVE 128 (382)
T ss_dssp EEEEEETTEECSSCBCCCTTCEEEEEEEEEEC-SCEEEEEEEEE--E--ESSSCB-----CCCCEEEEEEE
T ss_pred hhhhhhcCcCCCceEEecCCCeEeEEEEEecc-cCccccceeeE--e--ecCCCC-----CcCCceEEEEe
Confidence 3343 488877788899999998888777665 66677777653 2 245554 36788777765
No 142
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.81 E-value=71 Score=19.44 Aligned_cols=57 Identities=11% Similarity=-0.106 Sum_probs=30.3
Q ss_pred EEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEe--CCCceeeE
Q psy16567 47 TIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFP--AMPSGTFF 106 (127)
Q Consensus 47 ~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~--~~~~Gt~~ 106 (127)
+..+.|.|... .+..+.+.= .....+..=...-...+|.||++...... ++..|.|-
T Consensus 29 ~~~~~l~N~g~-~p~~~~~~~--~~~~~~~~f~v~p~~g~i~pg~~~~i~V~f~~~~~g~f~ 87 (112)
T 2e6j_A 29 CYEAILYNKGS-IDALFNMTP--PTSALGACFVFSPKEGIIEPSGVQAIQISFSSIILGNFE 87 (112)
T ss_dssp EEEEEEEECCS-SCEEEEECC--CSSHHHHHCEEESSEEEECTTBCCEEEEEECCCCCEEEE
T ss_pred EEEEEEEECCc-ceEEEEEec--CCccccCcEEEECCcCEECCCCEEEEEEEEECCCcceEE
Confidence 34689999988 777776631 00000000000112346899977665555 45677653
No 143
>1gr3_A Collagen X; extracellular matrix, connective tissue; HET: CPS; 2.0A {Homo sapiens} SCOP: b.22.1.1
Probab=33.70 E-value=22 Score=24.30 Aligned_cols=18 Identities=17% Similarity=0.379 Sum_probs=15.2
Q ss_pred CCeEEEecCCEEEEEEEc
Q psy16567 37 GPSIQVCKGDTIIVDVKN 54 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~N 54 (127)
.-+|.+++||+|.|++..
T Consensus 119 s~vL~L~~GD~Vwv~~~~ 136 (160)
T 1gr3_A 119 SAIIDLTENDQVWLQLPN 136 (160)
T ss_dssp EEEEEECTTCEEEEECCC
T ss_pred EEEEEECCCCEEEEEEec
Confidence 356999999999999854
No 144
>1tnr_A Tumor necrosis factor beta; complex(lymphokine/receptor); 2.85A {Homo sapiens} SCOP: b.22.1.1
Probab=31.60 E-value=37 Score=22.52 Aligned_cols=20 Identities=20% Similarity=0.451 Sum_probs=16.7
Q ss_pred CCCCeEEEecCCEEEEEEEc
Q psy16567 35 LPGPSIQVCKGDTIIVDVKN 54 (127)
Q Consensus 35 ~pgP~i~v~~Gd~v~v~~~N 54 (127)
+.|-++.+++||+|.|++.|
T Consensus 107 y~ggvf~L~~GD~l~v~v~~ 126 (144)
T 1tnr_A 107 YHGAAFQLTQGDQLSTHTDG 126 (144)
T ss_dssp EEEEEEEECTTCEEEEEEEC
T ss_pred EEeeEEEeCCCCEEEEEeCC
Confidence 34567999999999999876
No 145
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1
Probab=31.16 E-value=25 Score=24.44 Aligned_cols=17 Identities=12% Similarity=0.384 Sum_probs=14.6
Q ss_pred CeEEEecCCEEEEEEEc
Q psy16567 38 PSIQVCKGDTIIVDVKN 54 (127)
Q Consensus 38 P~i~v~~Gd~v~v~~~N 54 (127)
-+|.+++||+|.|++..
T Consensus 138 ~vL~L~~GD~Vwl~l~~ 154 (178)
T 1o91_A 138 AVLLLRPGDQVFLQMPS 154 (178)
T ss_dssp EEEEECTTCEEEEECCC
T ss_pred EEEEECCCCEEEEEEec
Confidence 46999999999998754
No 146
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=30.21 E-value=1.2e+02 Score=22.33 Aligned_cols=51 Identities=24% Similarity=0.302 Sum_probs=26.2
Q ss_pred CeEEEecCCEEEEEEEcCCCC-----CceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEE
Q psy16567 38 PSIQVCKGDTIIVDVKNHMID-----REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRY 95 (127)
Q Consensus 38 P~i~v~~Gd~v~v~~~N~~~~-----~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y 95 (127)
..|+.+-|-.+.|.|-|...+ .+..+..-|....... | ....+.||++++.
T Consensus 129 EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~a---G----~~i~L~PGESiTl 184 (246)
T 3kmh_A 129 EDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTA---G----SQLRLSPGESICL 184 (246)
T ss_dssp EEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECT---T----CEEEECTTCEEEE
T ss_pred ccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCC---C----CEEEECCCCeEec
Confidence 346666666777777776542 2344444443322111 1 1224688888764
No 147
>3ugn_A Tumor necrosis factor ligand superfamily member 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAG; 2.59A {Homo sapiens} PDB: 4en0_A*
Probab=29.75 E-value=16 Score=25.38 Aligned_cols=22 Identities=18% Similarity=0.412 Sum_probs=18.6
Q ss_pred CCCCeEEEecCCEEEEEEEcCC
Q psy16567 35 LPGPSIQVCKGDTIIVDVKNHM 56 (127)
Q Consensus 35 ~pgP~i~v~~Gd~v~v~~~N~~ 56 (127)
+.|-++.+++||+|.|.+.+..
T Consensus 129 ylGGvf~L~~GD~L~V~Vs~~~ 150 (167)
T 3ugn_A 129 FLGGVVHLEAGEEVVVRVLDER 150 (167)
T ss_dssp EEEEEEEECTTCEEEEEEESCC
T ss_pred eeceeEEeCCCCEEEEEeCChh
Confidence 4567899999999999998864
No 148
>3rpf_C Molybdopterin converting factor, subunit 1 (MOAD); MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=29.36 E-value=22 Score=20.65 Aligned_cols=24 Identities=21% Similarity=0.382 Sum_probs=17.5
Q ss_pred EEEEECCCC-CCCeEEEecCCEEEE
Q psy16567 27 AILSINRQL-PGPSIQVCKGDTIIV 50 (127)
Q Consensus 27 ~~~~~ng~~-pgP~i~v~~Gd~v~v 50 (127)
....+|+.+ +.+.-.++.||+|.|
T Consensus 43 ~~vavN~~~v~~~~~~l~~gDeV~i 67 (74)
T 3rpf_C 43 CAIALNDHLIDNLNTPLKDGDVISL 67 (74)
T ss_dssp CEEEESSSEECCTTCCCCTTCEEEE
T ss_pred cEEEECCEEcCCCCcCCCCCCEEEE
Confidence 456778877 666667888888876
No 149
>1s55_A Tumor necrosis factor ligand superfamily member 11; cytokine; 1.90A {Mus musculus} SCOP: b.22.1.1 PDB: 1iqa_A 3qbq_A 3me2_A 1jtz_X 3nzy_A
Probab=27.59 E-value=13 Score=25.16 Aligned_cols=20 Identities=25% Similarity=0.365 Sum_probs=14.2
Q ss_pred CCCCeEEEecCCEEEEEEEc
Q psy16567 35 LPGPSIQVCKGDTIIVDVKN 54 (127)
Q Consensus 35 ~pgP~i~v~~Gd~v~v~~~N 54 (127)
+.|-++.+++||+|.|++.+
T Consensus 115 y~ggvf~L~~GD~l~v~v~~ 134 (156)
T 1s55_A 115 NVGGFFKLRAGEEISIQVSN 134 (156)
T ss_dssp EEEEEEEECTTEEEEEEESC
T ss_pred eeeeEEEeCCCCEEEEEeCC
Confidence 34567888888888887643
No 150
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=26.56 E-value=75 Score=27.43 Aligned_cols=59 Identities=15% Similarity=0.211 Sum_probs=34.2
Q ss_pred EEEecC-CEEEEEEEcCCCCCceEE--EEeeeeeecCCCCC-----C----CcccceeeeCCCCEEEEEEeC
Q psy16567 40 IQVCKG-DTIIVDVKNHMIDREVTL--HWHGVYQKVTPWMD-----G----VPMVTQCPIPSSTTFRYKFPA 99 (127)
Q Consensus 40 i~v~~G-d~v~v~~~N~~~~~~~si--H~HG~~~~~~~~~D-----G----~~~~~~~~i~PG~~~~y~~~~ 99 (127)
|.+++| ++++++++|..+ ++..+ |.|=+........| | .|.-+..-.+||++++..+..
T Consensus 144 ~~~~~~~~~~~~~v~~~~~-r~~~v~sh~hf~e~n~~l~fdr~~~~g~rl~~~~g~~~rf~pg~~~~v~l~~ 214 (840)
T 4gy7_A 144 LTLNIGRKAVILKVTSKGD-RPIQVGSHYHFIEVNPYLTFDRRKAYGMRLNIAAGTAVRFEPGDCKSVTLVS 214 (840)
T ss_dssp EECSCSCEEEEEEEEECCS-SCEEEETTSCGGGSCTTEEBCHHHHTTEEECSCTTCEEEECTTCEEEEEEEE
T ss_pred eEecCCCceEEEEEEeCCC-CceEeccccchhhcCcccccchhhhccccccccCCCceeeCCCCeeEEEEEE
Confidence 555666 478899999998 77666 44433221111112 1 111122236899999999874
No 151
>1rj8_A Ectodysplasin-A isoform EDA-A2; TNF domain, jelly roll, splice variant, trimer, hormone-GROW complex; 2.23A {Homo sapiens} SCOP: b.22.1.1 PDB: 1rj7_A
Probab=26.49 E-value=38 Score=23.10 Aligned_cols=19 Identities=11% Similarity=0.024 Sum_probs=15.9
Q ss_pred CCeEEEecCCEEEEEEEcC
Q psy16567 37 GPSIQVCKGDTIIVDVKNH 55 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~N~ 55 (127)
|-++++++||+|.|++.+.
T Consensus 122 GgV~~L~~GD~l~v~v~~~ 140 (164)
T 1rj8_A 122 AGVCLLKARQKIAVKMVHA 140 (164)
T ss_dssp EEEEEECTTCEEEEEECSC
T ss_pred eeEEEeCCCCEEEEEecCC
Confidence 5579999999999998543
No 152
>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}
Probab=26.26 E-value=14 Score=20.95 Aligned_cols=26 Identities=15% Similarity=0.364 Sum_probs=19.5
Q ss_pred EEEEEECCCCCCCeEEEecCCEEEEE
Q psy16567 26 RAILSINRQLPGPSIQVCKGDTIIVD 51 (127)
Q Consensus 26 ~~~~~~ng~~pgP~i~v~~Gd~v~v~ 51 (127)
+.++.|.++-+...|.+++||.|.|.
T Consensus 7 rAlydy~~~~~~e~Ls~~~Gd~i~v~ 32 (60)
T 2lx7_A 7 RTLYPFSGERHGQGLRFAAGELITLL 32 (60)
T ss_dssp EESCCCCSCCCSSCCCCCTTCEEEBS
T ss_pred EECcccCCCCCCCCccCCCCCEEEEe
Confidence 44567777766666999999998863
No 153
>4f3j_A Complement C1Q tumor necrosis factor-related PROT; late-onset retinal macular degeneration, L-ORMD, L-ORD, AMD, related macular degeneration; 1.34A {Homo sapiens}
Probab=26.24 E-value=35 Score=22.56 Aligned_cols=17 Identities=18% Similarity=0.223 Sum_probs=13.9
Q ss_pred CeEEEecCCEEEEEEEc
Q psy16567 38 PSIQVCKGDTIIVDVKN 54 (127)
Q Consensus 38 P~i~v~~Gd~v~v~~~N 54 (127)
-+|.+++||+|.|++..
T Consensus 94 ~il~L~~GD~V~v~~~~ 110 (148)
T 4f3j_A 94 AMVRLEPEDQVWVQVGV 110 (148)
T ss_dssp EEEEECTTCEEEEECCS
T ss_pred EEEEcCCCCEEEEEEEc
Confidence 35899999999998743
No 154
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.88 E-value=1e+02 Score=19.35 Aligned_cols=56 Identities=13% Similarity=0.124 Sum_probs=33.9
Q ss_pred EEEecCCEEEEEEEcCCCCCceEEEEeeee-eecCCCCCCCcccceeeeCCCCEEEEEEeC--CCcee
Q psy16567 40 IQVCKGDTIIVDVKNHMIDREVTLHWHGVY-QKVTPWMDGVPMVTQCPIPSSTTFRYKFPA--MPSGT 104 (127)
Q Consensus 40 i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~-~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~--~~~Gt 104 (127)
..+..-.+..+.+.|... .+..+.|.-.. +... | ....+.||++....... .+.|.
T Consensus 37 ~~v~~~~~~~~~l~N~g~-~~~~f~~~~~~~F~i~------P--~~g~L~pg~~~~i~V~F~P~~~g~ 95 (122)
T 2ys4_A 37 CPVKYSTQKILLVRNIGN-KNAVFHIKTCRPFSIE------P--AIGTLNVGESMQLEVEFEPQSVGD 95 (122)
T ss_dssp EESSSCEEEEEEEECCSS-SCEEEEEECCTTEEEE------S--SEEEECTTCEEEEEEEECCSSSBC
T ss_pred eecCCeEEEEEEEEECCC-CCEEEEEecCCCeEEE------C--CcCEECCCCEEEEEEEEEcCCCcc
Confidence 334444567788999987 78888776421 0000 1 12358999988776664 45554
No 155
>3mjj_A Predicted acetamidase/formamidase; beta/alpha structure, hydrolase; 1.99A {Thermoanaerobacter tengcongensis} PDB: 3tkk_A
Probab=25.30 E-value=51 Score=25.08 Aligned_cols=26 Identities=23% Similarity=0.466 Sum_probs=19.3
Q ss_pred EEECCCCCCCeEEEecCCEEEEEEEcC
Q psy16567 29 LSINRQLPGPSIQVCKGDTIIVDVKNH 55 (127)
Q Consensus 29 ~~~ng~~pgP~i~v~~Gd~v~v~~~N~ 55 (127)
+.++... .|.++++.||+|++.-...
T Consensus 14 ~~~~~~~-~Pvl~V~~Gd~v~~et~D~ 39 (301)
T 3mjj_A 14 FAFSKEN-KPAISVKSGDELEVETMDA 39 (301)
T ss_dssp SEECTTS-CCSEEEETTCEEEEEECCT
T ss_pred EEECCCC-CCEEEECCCCEEEEEEEec
Confidence 4455544 4999999999999975543
No 156
>3b9t_A Twin-arginine translocation pathway signal protei; YP_546212.1, predicted acetamidase/formamidase, acetamidase/formamidase family; 1.58A {Methylobacillus flagellatus KT}
Probab=25.22 E-value=49 Score=26.90 Aligned_cols=29 Identities=14% Similarity=0.276 Sum_probs=21.6
Q ss_pred ceEEEEE-ECCCCCCCeEEEecCCEEEEEEE
Q psy16567 24 FERAILS-INRQLPGPSIQVCKGDTIIVDVK 53 (127)
Q Consensus 24 ~~~~~~~-~ng~~pgP~i~v~~Gd~v~v~~~ 53 (127)
.++..|. |+... .|+++++.||+|+|.-.
T Consensus 80 ~~tv~wg~fs~~~-~PvltV~sGd~V~ieT~ 109 (484)
T 3b9t_A 80 DKTVSWGFFSKSL-KPVVELESGDFATIETL 109 (484)
T ss_dssp TTTEEESEECTTS-CCSEEECTTCEEEEEEC
T ss_pred CCceEeCCcCCCC-CceEEECCCCEEEEEEe
Confidence 4455676 45443 59999999999999854
No 157
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=24.89 E-value=1.2e+02 Score=19.44 Aligned_cols=72 Identities=11% Similarity=0.052 Sum_probs=37.6
Q ss_pred EEEecCCEEEEEEEcCCCCCceEEEEee-eeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCceeeEEccCCCCC----
Q psy16567 40 IQVCKGDTIIVDVKNHMIDREVTLHWHG-VYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVDRR---- 114 (127)
Q Consensus 40 i~v~~Gd~v~v~~~N~~~~~~~siH~HG-~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~~yH~H~~~~---- 114 (127)
++++.||.|.+.+... .|++.--. -.+.. .-..+ + + .....|. ..+.++.+|.+||.|-...|
T Consensus 28 ~~f~vGD~L~F~y~~~----~HsV~~V~~~~y~~-C~~~~-~-~--~~~~~G~---~~v~l~~~G~~yFic~~~~HC~~G 95 (116)
T 1x9u_A 28 KTFRVGDELEFDFAAG----MHDVAVVTKDAFDN-CKKEN-P-I--SHMTTPP---VKIMLNTTGPQYYICTVGDHCRVG 95 (116)
T ss_dssp CCEETTCEEEECCCTT----TCCEEEECHHHHHT-TCCSS-C-S--EEECSSS---EEEECCSCEEEEEECCSTTTTTTT
T ss_pred ccCcCCCEEEEEecCC----CCeEEEEChhhcCc-cCCCC-C-c--cccCCCC---eEEEECCCCCEEEECCCCCccccC
Confidence 6899999999877542 23321100 00000 10110 0 0 0123343 46788899999999976444
Q ss_pred ceeeE-EEEc
Q psy16567 115 PYCPE-IEEK 123 (127)
Q Consensus 115 ~~g~l-iV~d 123 (127)
+-..| .|..
T Consensus 96 mkl~In~V~~ 105 (116)
T 1x9u_A 96 QKLSINVVGA 105 (116)
T ss_dssp CEEEEEEECC
T ss_pred CEEEEEEECC
Confidence 24455 5543
No 158
>2q5w_D Molybdopterin converting factor, subunit 1; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_B*
Probab=23.94 E-value=31 Score=19.87 Aligned_cols=23 Identities=17% Similarity=0.237 Sum_probs=16.6
Q ss_pred EEEECCCCCCCeEEEecCCEEEE
Q psy16567 28 ILSINRQLPGPSIQVCKGDTIIV 50 (127)
Q Consensus 28 ~~~~ng~~pgP~i~v~~Gd~v~v 50 (127)
+..+||++-...-.++.||+|.|
T Consensus 48 ~v~vNg~~v~~~~~L~~gD~V~i 70 (77)
T 2q5w_D 48 QVAVNEEFVQKSDFIQPNDTVAL 70 (77)
T ss_dssp EEEETTEEECTTSEECTTCEEEE
T ss_pred EEEECCEECCCCCCcCCCCEEEE
Confidence 57778875444567888998876
No 159
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=23.31 E-value=1.5e+02 Score=18.91 Aligned_cols=62 Identities=11% Similarity=0.224 Sum_probs=31.9
Q ss_pred EecCC--EEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccc--eeeeCCCCEEE--EEEeCC-CceeeEEccC
Q psy16567 42 VCKGD--TIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVT--QCPIPSSTTFR--YKFPAM-PSGTFFYHSH 110 (127)
Q Consensus 42 v~~Gd--~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~--~~~i~PG~~~~--y~~~~~-~~Gt~~yH~H 110 (127)
..+|+ ++.++++|.+....-++-+ ..+.||..... -..+.+|++.+ |.|.+. .+|+|-.--.
T Consensus 15 ~~~~~~~ti~atVkN~G~~~a~~~~V-------~ly~~g~~v~t~~v~~LaaG~s~tv~~~w~~~~~~G~ytl~a~ 83 (114)
T 2l0d_A 15 VVPNTVNTMTATIENQGNKDSTSFNV-------SLLVDGIVVDTQTVTSLESENSTNVDFHWTLDGTANSYTLTVN 83 (114)
T ss_dssp ECTTSEEEEEEEEEECSSSCBCCEEE-------EEEETTEEEEEEEESCBCBTCEEEEEEEEECCCSCSEEEEEEE
T ss_pred cCCCCeEEEEEEEEECCCCCCCCEEE-------EEEECCEEEcceecccccCCCEEEEEEEEeecCcCceEEEEEE
Confidence 44555 5567788988632222111 11245542111 11367898755 556665 4788865443
No 160
>1u5x_A Tumor necrosis factor ligand superfamily member 1; TNFSF, cytokine, jelly-roll, trimer, hormone-growth factor C; 1.80A {Mus musculus} SCOP: b.22.1.1 PDB: 1u5y_A 1u5z_A 3k48_A 1xu1_A 1xu2_A
Probab=22.99 E-value=45 Score=22.08 Aligned_cols=20 Identities=20% Similarity=0.376 Sum_probs=16.8
Q ss_pred CCCeEEEecCCEEEEEEEcC
Q psy16567 36 PGPSIQVCKGDTIIVDVKNH 55 (127)
Q Consensus 36 pgP~i~v~~Gd~v~v~~~N~ 55 (127)
.|-++++++||+|.|++.+.
T Consensus 103 ~gGvf~L~~GD~l~v~v~~~ 122 (140)
T 1u5x_A 103 SAGVFHLHQGDIITVKIPRA 122 (140)
T ss_dssp EEEEEEECTTCEEEEEESST
T ss_pred EeeEEEeCCCCEEEEEecCC
Confidence 46679999999999997764
No 161
>2q8o_A GITR ligand; TNF, dimer, unknown function; 1.75A {Mus musculus} SCOP: b.22.1.1 PDB: 3fc0_A 2qdn_A 3b9i_A
Probab=22.81 E-value=35 Score=22.83 Aligned_cols=21 Identities=19% Similarity=0.319 Sum_probs=17.2
Q ss_pred CCCCeEEEecCCEEEEEEEcC
Q psy16567 35 LPGPSIQVCKGDTIIVDVKNH 55 (127)
Q Consensus 35 ~pgP~i~v~~Gd~v~v~~~N~ 55 (127)
..|-++.+++||+|.|++.+.
T Consensus 94 ylGGVF~L~~GD~L~v~v~~~ 114 (136)
T 2q8o_A 94 PIGGVYELHAGDNIYLKFNSK 114 (136)
T ss_dssp EEEEEEEECTTCEEEEEESCG
T ss_pred eecceeecCCCCEEEEEeCCh
Confidence 457789999999999997653
No 162
>3u7z_A Putative metal binding protein rumgna_00854; the binding protein, transport protein, structural genomics, center for structural genomics; 1.30A {Ruminococcus gnavus}
Probab=22.79 E-value=47 Score=21.09 Aligned_cols=29 Identities=14% Similarity=0.180 Sum_probs=20.4
Q ss_pred EEEEE--ECCCCCC---CeEEEecCCEEEEEEEc
Q psy16567 26 RAILS--INRQLPG---PSIQVCKGDTIIVDVKN 54 (127)
Q Consensus 26 ~~~~~--~ng~~pg---P~i~v~~Gd~v~v~~~N 54 (127)
+..|. .||..+. --+.++.||.|++++..
T Consensus 66 ~~yW~~~vng~~~~~Ga~~~~v~dGD~i~~~~t~ 99 (101)
T 3u7z_A 66 QQWWCITKGGEQVNTSADQTPVSDGDAFELTLKE 99 (101)
T ss_dssp TEEEEEEETTEECCSCGGGCBCCTTCEEEEEEEE
T ss_pred CCEEEEEECCEEhhhchhheEecCCCEEEEEEec
Confidence 34454 4887543 34889999999999864
No 163
>4ety_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, extra celluar domain, domain swappin nysgrc, structural genomics; 1.90A {Mus musculus}
Probab=22.30 E-value=1.5e+02 Score=18.60 Aligned_cols=65 Identities=15% Similarity=0.230 Sum_probs=32.4
Q ss_pred CCCCCCeEE------EecCCEEEEEEEcCCCCCc---eEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeC---C
Q psy16567 33 RQLPGPSIQ------VCKGDTIIVDVKNHMIDRE---VTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPA---M 100 (127)
Q Consensus 33 g~~pgP~i~------v~~Gd~v~v~~~N~~~~~~---~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~---~ 100 (127)
|.+|-|.|. +..|+.|.|+= -... .. ..++|+ .||.....+....++...+|.+.. +
T Consensus 5 g~lpkPsL~a~P~~vV~~G~~VTL~C-~~~~-~~~~~~~f~L~---------k~g~~~~~~~~~~~~~~a~f~i~~vt~~ 73 (118)
T 4ety_A 5 GSLPDITIFPNSSLMISQGTFVTVVC-SYSD-KHDLYNMVRLE---------KDGSTFMEKSTEPYKTEDEFEIGPVNET 73 (118)
T ss_dssp -CCCEEEEECCSEEEEETTCCEEEEE-ECTT-TGGGCCEEEEE---------ETTEEEEEEECCSSSSEEEEEECSCCGG
T ss_pred CCCCCCEEEEeCCCcccCCCcEEEEE-CCCC-CCcccCEEEEE---------ECCcCccccccCCCCcceEEEeCccCcc
Confidence 456666665 44678888776 4332 10 344442 344321111122355666666653 3
Q ss_pred CceeeEEc
Q psy16567 101 PSGTFFYH 108 (127)
Q Consensus 101 ~~Gt~~yH 108 (127)
++|.|...
T Consensus 74 daG~Y~C~ 81 (118)
T 4ety_A 74 ITGHYSCI 81 (118)
T ss_dssp GCEEEEEE
T ss_pred CCeEEEEE
Confidence 67886543
No 164
>4g9s_B Inhibitor of G-type lysozyme, goose-type lysozyme; hydrolase inhibitor, hydrolase-hydrolase inhibitor; HET: FLC; 0.95A {Escherichia coli} PDB: 4dy3_A* 4dxz_A* 4dy5_A
Probab=22.02 E-value=64 Score=20.25 Aligned_cols=17 Identities=24% Similarity=0.415 Sum_probs=14.6
Q ss_pred eEEEecCCEEEEEEEcC
Q psy16567 39 SIQVCKGDTIIVDVKNH 55 (127)
Q Consensus 39 ~i~v~~Gd~v~v~~~N~ 55 (127)
+|+++.|+++.|++...
T Consensus 31 ~~~a~aGQ~l~v~l~s~ 47 (111)
T 4g9s_B 31 TFYAKKGQKVHVSISNE 47 (111)
T ss_dssp EEEECTTCEEEEEESCT
T ss_pred EEEecCCCEEEEEEecC
Confidence 48999999999998764
No 165
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=21.41 E-value=2.1e+02 Score=19.86 Aligned_cols=48 Identities=4% Similarity=-0.039 Sum_probs=29.4
Q ss_pred CEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCC
Q psy16567 46 DTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM 100 (127)
Q Consensus 46 d~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~ 100 (127)
...++.+.|... .+..++.- ..+ .+..- .....+|+||++-...++.+
T Consensus 21 ~~~~~~i~N~g~-~pl~i~~~--~~p--~~~~~--~~~~~~I~PG~~g~I~vt~~ 68 (220)
T 2qsv_A 21 GVVRLVVNNTDE-SDLQVAVV--SLP--SFVSL--DDRAFRLQAREPRELNLSLA 68 (220)
T ss_dssp CEEEEEEEECSS-SCEEEEEE--ECC--TTEEC--SCCEEEECSSSCEEEEEEEC
T ss_pred ceEEEEEEeCCC-CceEEEec--cCC--CceEe--eeCcceeCCCCceEEEEEEc
Confidence 456788999988 67776653 221 11110 12335799999877777664
No 166
>3jqw_A COLH protein, collagenase; beta-barrel, dual calcium site, cell adhesion; 2.00A {Clostridium histolyticum} SCOP: b.23.2.0 PDB: 3jqx_A
Probab=21.29 E-value=1.7e+02 Score=18.80 Aligned_cols=57 Identities=14% Similarity=0.221 Sum_probs=32.6
Q ss_pred EEEecCCEEEEEEEcCCCCCceEEEEeeeeeecCCCCCCCcccceeeeCCCCEEEEEEeCCCceeeEE
Q psy16567 40 IQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFY 107 (127)
Q Consensus 40 i~v~~Gd~v~v~~~N~~~~~~~siH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~~~~~~~Gt~~y 107 (127)
|.+..-..|.|.|.|... . -+.|-=.+ .++ ..+.... .-|......|.++.||+|..
T Consensus 43 F~V~~~g~v~I~l~~~~~-~--~~~w~ly~------~~~-nyv~y~~-~~gn~~~~~~~~~~pGkYYl 99 (121)
T 3jqw_A 43 FDVITPGEVKIDINKLGY-G--GATWVVYD------ENN-NAVSYAT-DDGQNLSGKFKADKPGRYYI 99 (121)
T ss_dssp EEESSCEEEEEEEEECSS-S--EEEEEEEC------TTS-CEEEECE-ECSSEEEEEEEECSCEEEEE
T ss_pred EEeCCCCeEEEEEEecCC-C--cEEEEEEe------CCC-CeEEEec-cCCCEEEEEEEeCCCeeEEE
Confidence 677778899999999643 2 23331111 121 1222222 33667777788888887654
No 167
>1kxg_A B lymphocyte stimulator; BAFF, TALL-1, thank, ZTNF4, cytokine, TNF superfamily, jellyroll, beta-sandwich; HET: CIT; 2.00A {Homo sapiens} SCOP: b.22.1.1 PDB: 1kd7_A 1otz_A 1oqe_A 1jh5_A 1oqd_A
Probab=21.22 E-value=39 Score=22.96 Aligned_cols=22 Identities=9% Similarity=0.196 Sum_probs=18.1
Q ss_pred CCCCeEEEecCCEEEEEEEcCC
Q psy16567 35 LPGPSIQVCKGDTIIVDVKNHM 56 (127)
Q Consensus 35 ~pgP~i~v~~Gd~v~v~~~N~~ 56 (127)
+.|-++++++||+|.|++.+..
T Consensus 113 y~GGVf~L~~GD~L~v~v~~~~ 134 (152)
T 1kxg_A 113 YSAGIAKLEEGDELQLAIPREN 134 (152)
T ss_dssp EEEEEEEECTTCEEEEEESSTT
T ss_pred EEheeEEeCCCCEEEEEecCCC
Confidence 3467799999999999988743
No 168
>3jqo_A TRAF protein; helical outer membrane TM, outer membrane protein complex, plasmid, transport protein; HET: LDA; 2.60A {Escherichia coli}
Probab=20.56 E-value=56 Score=23.80 Aligned_cols=17 Identities=24% Similarity=0.385 Sum_probs=14.7
Q ss_pred CCeEEEecCCEEEEEEE
Q psy16567 37 GPSIQVCKGDTIIVDVK 53 (127)
Q Consensus 37 gP~i~v~~Gd~v~v~~~ 53 (127)
.|||.+++|++|.|-+.
T Consensus 197 ~PTl~i~~G~~v~I~V~ 213 (227)
T 3jqo_A 197 PPTLYDQQGDAVSIFVA 213 (227)
T ss_dssp CCEEEECTTCEEEEECC
T ss_pred CCeEEECCCCEEEEEEe
Confidence 59999999999998653
No 169
>4g4f_A Tumor necrosis factor ligand superfamily member 1; glucocorticoid-induced TNF receptor ligand, immune system, T structural genomics; 1.85A {Otolemur garnettii}
Probab=20.46 E-value=54 Score=21.80 Aligned_cols=22 Identities=18% Similarity=0.167 Sum_probs=18.8
Q ss_pred CCCCeEEEecCCEEEEEEEcCC
Q psy16567 35 LPGPSIQVCKGDTIIVDVKNHM 56 (127)
Q Consensus 35 ~pgP~i~v~~Gd~v~v~~~N~~ 56 (127)
..|-++.+++||+|-|++.|..
T Consensus 85 ~~GGVF~L~~GD~Ifv~vn~~~ 106 (126)
T 4g4f_A 85 DVGGTYEFHAGDIIDLIFDDEH 106 (126)
T ss_dssp CCCEEEEECTTCEEEEEESCGG
T ss_pred ecccEEEeCCCCEEEEEEcCHH
Confidence 4678899999999999988754
No 170
>1dm9_A Hypothetical 15.5 KD protein in MRCA-PCKA intergenic region; heat shock proteins, protein-RNA interactions, ribosome, structural genomics; 2.00A {Escherichia coli} SCOP: d.66.1.3 PDB: 3bbu_A
Probab=20.06 E-value=38 Score=22.30 Aligned_cols=23 Identities=26% Similarity=0.156 Sum_probs=16.0
Q ss_pred EECCCCCCCeEEEecCCEEEEEE
Q psy16567 30 SINRQLPGPSIQVCKGDTIIVDV 52 (127)
Q Consensus 30 ~~ng~~pgP~i~v~~Gd~v~v~~ 52 (127)
.+||+.--|...++.||.|.|.+
T Consensus 37 ~VNG~~vk~s~~V~~GD~I~I~~ 59 (133)
T 1dm9_A 37 HYNGQRSKPSKIVELNATLTLRQ 59 (133)
T ss_dssp EETTEECCTTCBCCTTCEEEEEE
T ss_pred EECCEEcCCCCEeCCCCEEEEEe
Confidence 46776445666778888888765
Done!