Query psy16569
Match_columns 385
No_of_seqs 200 out of 224
Neff 4.2
Searched_HMMs 29240
Date Fri Aug 16 16:22:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16569.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16569hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kif_A O6-methylguanine-DNA me 76.6 2.9 9.8E-05 35.0 4.6 53 188-254 2-60 (108)
2 3gva_A Alkyltransferase-like p 72.5 4.1 0.00014 34.5 4.6 53 188-254 4-62 (116)
3 2g7h_A Methylated-DNA--protein 65.8 6.6 0.00023 35.3 4.7 53 188-254 78-134 (167)
4 1wrj_A Methylated-DNA--protein 64.8 5.5 0.00019 35.2 3.9 53 188-254 70-126 (156)
5 1sfe_A ADA O6-methylguanine-DN 61.0 6.7 0.00023 35.4 3.9 53 188-254 95-153 (180)
6 1mgt_A MGMT, protein (O6-methy 58.9 8.8 0.0003 34.5 4.2 53 188-254 90-147 (174)
7 1eh6_A O6-alkylguanine-DNA alk 47.8 16 0.00054 33.7 4.1 53 188-254 92-151 (207)
8 3l00_A SNAP-TAG; protein TAG, 36.5 34 0.0012 31.0 4.3 53 188-254 95-154 (182)
9 2q9r_A Protein of unknown func 23.2 1.1E+02 0.0036 28.2 5.2 99 223-342 47-153 (200)
10 3anw_B GINS23, putative unchar 22.7 32 0.0011 31.0 1.6 93 180-277 71-166 (171)
11 3f7c_A Protein of unknown func 20.3 2.8E+02 0.0096 25.4 7.4 117 224-364 47-193 (200)
No 1
>2kif_A O6-methylguanine-DNA methyltransferase; methods development, solution structure, DNA base repair methylguanine methyltransferase; NMR {Vibrio parahaemolyticus AQ3810} PDB: 2kim_A
Probab=76.58 E-value=2.9 Score=35.01 Aligned_cols=53 Identities=19% Similarity=0.238 Sum_probs=41.1
Q ss_pred ccchHHHHHHHhhCCCceEecceecCCCccccccchhhHHH------HHHHHHHHhhcCCCCccccccccCCC
Q psy16569 188 SHFYNQVWDIMIRTPEGISVQGHILPQQPTLSNMTQSELTF------ALVAVWDIMIRTPEGISVQGHILPQQ 254 (385)
Q Consensus 188 ~~FY~~VW~iL~~~p~Gl~I~g~~~~~~~~~~n~~~~~~~~------~~~~~~~~~~~~p~~i~~~~~~L~~~ 254 (385)
.+|+.+||+.|..-|.|=+. |-+|+-= |-++|=..|-+.|-.+.|++||.-..
T Consensus 2 t~F~~~V~~~l~~IP~G~v~--------------TYg~iA~~~G~p~aaRaVG~Al~~Np~~~~iPcHRVv~s 60 (108)
T 2kif_A 2 DQFLVQIFAVIHQIPKGKVS--------------TYGEIAKMAGYPGYARHVGKALGNLPEGSKLPWFRVINS 60 (108)
T ss_dssp CHHHHHHHHHHTTCCTTCBE--------------EHHHHHHHHTCTTCHHHHHHHHHHSCTTCSSCCTTEECT
T ss_pred CHHHHHHHHHHhcCCCCCcE--------------eHHHHHHHhCCCCcHHHHHHHHHhCCCCCCCCCceeECC
Confidence 47999999999999985433 4444433 34778888999999999999998665
No 2
>3gva_A Alkyltransferase-like protein 1; alkylated DNA damage repair, DNA damage, DNA repair, DNA- binding, DNA binding protein; 2.00A {Schizosaccharomyces pombe} PDB: 3gx4_X* 3gyh_X* 4enj_A* 4enk_A* 4enm_A* 4enn_A* 4hdu_A* 4hdv_A*
Probab=72.50 E-value=4.1 Score=34.52 Aligned_cols=53 Identities=23% Similarity=0.274 Sum_probs=42.0
Q ss_pred ccchHHHHHHHhhCCCceEecceecCCCccccccchhhHHH------HHHHHHHHhhcCCCCccccccccCCC
Q psy16569 188 SHFYNQVWDIMIRTPEGISVQGHILPQQPTLSNMTQSELTF------ALVAVWDIMIRTPEGISVQGHILPQQ 254 (385)
Q Consensus 188 ~~FY~~VW~iL~~~p~Gl~I~g~~~~~~~~~~n~~~~~~~~------~~~~~~~~~~~~p~~i~~~~~~L~~~ 254 (385)
.+|+.+||+.|..-|.| ++ +|-+|+-- |-++|=..|-+.|-.|.|++||.-..
T Consensus 4 t~Fq~~Vw~~l~~IP~G-----~v---------~TYg~IA~~~G~p~aaRaVG~Al~~Np~~i~IPCHRVV~s 62 (116)
T 3gva_A 4 DEFYTKVYDAVCEIPYG-----KV---------STYGEIARYVGMPSYARQVGQAMKHLHPETHVPWHRVINS 62 (116)
T ss_dssp HHHHHHHHHHHTTSCTT-----CB---------BCHHHHHHHTTCTTCHHHHHHHHHTSCTTCSSCGGGBCCT
T ss_pred cHHHHHHHHHHhcCCCC-----Ce---------EeHHHHHHHhCCCCcHHHHHHHHHhCCCCcCCCceEEECC
Confidence 47999999999999984 44 34555543 45778888999999999999998775
No 3
>2g7h_A Methylated-DNA--protein-cysteine methyltransferase; protein structure, DNA repair, DNA methyltransferase; NMR {Methanocaldococcus jannaschii}
Probab=65.76 E-value=6.6 Score=35.26 Aligned_cols=53 Identities=23% Similarity=0.260 Sum_probs=41.6
Q ss_pred ccchHHHHHHHhhCCCceEecceecCCCccccccchhhHHHHH----HHHHHHhhcCCCCccccccccCCC
Q psy16569 188 SHFYNQVWDIMIRTPEGISVQGHILPQQPTLSNMTQSELTFAL----VAVWDIMIRTPEGISVQGHILPQQ 254 (385)
Q Consensus 188 ~~FY~~VW~iL~~~p~Gl~I~g~~~~~~~~~~n~~~~~~~~~~----~~~~~~~~~~p~~i~~~~~~L~~~ 254 (385)
..|..+||+.|..-|.|=+. |-+++-=++ ++|=..|-+.|-.|.|++||.-..
T Consensus 78 t~Fq~~Vw~~l~~IP~G~t~--------------TYg~iA~~~G~p~RaVG~Al~~Np~~i~iPCHRVv~~ 134 (167)
T 2g7h_A 78 PEFTKKVLDIVKDIEFGKTL--------------TYGDIAKKLNTSPRAVGMALKRNPLPLIIPCHRVVAK 134 (167)
T ss_dssp SSCCHHHHHHHTTCCTTCCE--------------EHHHHHHHHTSCHHHHHHHHHTCSCTTTSGGGGEECS
T ss_pred HHHHHHHHHHhcCCCCCCEe--------------eHHHHHHHhCCCHHHHHHHHHhCCCCCccCceeEECC
Confidence 78999999999999985433 444443332 788888999999999999998765
No 4
>1wrj_A Methylated-DNA--protein-cysteine methyltransferase; 2.00A {Sulfolobus tokodaii}
Probab=64.84 E-value=5.5 Score=35.23 Aligned_cols=53 Identities=17% Similarity=0.177 Sum_probs=41.6
Q ss_pred ccchHHHHHHHhhCCCceEecceecCCCccccccchhhHHHHH----HHHHHHhhcCCCCccccccccCCC
Q psy16569 188 SHFYNQVWDIMIRTPEGISVQGHILPQQPTLSNMTQSELTFAL----VAVWDIMIRTPEGISVQGHILPQQ 254 (385)
Q Consensus 188 ~~FY~~VW~iL~~~p~Gl~I~g~~~~~~~~~~n~~~~~~~~~~----~~~~~~~~~~p~~i~~~~~~L~~~ 254 (385)
.+|..+||+.|..-|.| ++ +|-+|+-=++ ++|=..|-+.|-.|.|++||.-.+
T Consensus 70 t~fq~~V~~~l~~IP~G-----~~---------~tYg~iA~~~g~p~RaVG~A~~~np~~~~iPcHRVv~~ 126 (156)
T 1wrj_A 70 NEFRIRVFKEVMRIKWG-----EV---------RTYKQVADAVKTSPRAVGTALSKNNVLLIIPCHRVIGE 126 (156)
T ss_dssp CHHHHHHHHHHTTSCTT-----CC---------EEHHHHHHHTTSCHHHHHHHHHTCSBTTTSCGGGEECS
T ss_pred CHHHHHHHHHHhCCCCC-----ce---------EcHHHHHHHhCCCccHHHHHHHhCCCCCccCCCeEECC
Confidence 47999999999999985 43 3444544333 788889999999999999998665
No 5
>1sfe_A ADA O6-methylguanine-DNA methyltransferase; enzyme, nucleic acid binding DNA repair protein, DNA-binding protein; 2.10A {Escherichia coli} SCOP: a.4.2.1 c.55.7.1
Probab=61.05 E-value=6.7 Score=35.40 Aligned_cols=53 Identities=25% Similarity=0.320 Sum_probs=41.4
Q ss_pred ccchHHHHHHHhhCCCceEecceecCCCccccccchhhHHH------HHHHHHHHhhcCCCCccccccccCCC
Q psy16569 188 SHFYNQVWDIMIRTPEGISVQGHILPQQPTLSNMTQSELTF------ALVAVWDIMIRTPEGISVQGHILPQQ 254 (385)
Q Consensus 188 ~~FY~~VW~iL~~~p~Gl~I~g~~~~~~~~~~n~~~~~~~~------~~~~~~~~~~~~p~~i~~~~~~L~~~ 254 (385)
.+|..+||+.|..-|.|=+. |-+|+-= |-++|=..|-+.|-.|.|++||.-..
T Consensus 95 t~Fq~~V~~~l~~IP~G~~~--------------tYg~iA~~~g~p~a~RaVg~A~~~np~~~~iPcHRVv~~ 153 (180)
T 1sfe_A 95 TAFQQQVWQALRTIPCGETV--------------SYQQLANAIGKPKAVRAVASACAANKLAIVIPCHRVVRG 153 (180)
T ss_dssp CHHHHHHHHHHTTSCTTCCE--------------EHHHHHHHTTCTTCHHHHHHHHHTCCBBTTBCGGGEECT
T ss_pred ChHHHHHHHHHhcCCCCCeE--------------eHHHHHHHhCCCchHHHHHHHHHhCCCCcccCcceEECC
Confidence 68999999999999985433 3333322 45788888999999999999998765
No 6
>1mgt_A MGMT, protein (O6-methylguanine-DNA methyltransferase); DNA repair protein, suicidal enzyme, hyperthermostability; 1.80A {Thermococcus kodakarensis} SCOP: a.4.2.1 c.55.7.1
Probab=58.92 E-value=8.8 Score=34.55 Aligned_cols=53 Identities=26% Similarity=0.307 Sum_probs=41.0
Q ss_pred ccchHHHHHHHh-hCCCceEecceecCCCccccccchhhHHHH----HHHHHHHhhcCCCCccccccccCCC
Q psy16569 188 SHFYNQVWDIMI-RTPEGISVQGHILPQQPTLSNMTQSELTFA----LVAVWDIMIRTPEGISVQGHILPQQ 254 (385)
Q Consensus 188 ~~FY~~VW~iL~-~~p~Gl~I~g~~~~~~~~~~n~~~~~~~~~----~~~~~~~~~~~p~~i~~~~~~L~~~ 254 (385)
.+|..+||+.|. +-|.|=+. |-+|+-=+ -++|=..|-+.|-.+.|++||.-..
T Consensus 90 t~Fq~~V~~~l~~~IP~G~~~--------------TYg~iA~~~G~p~RaVG~A~~~Np~~~~iPcHRVv~~ 147 (174)
T 1mgt_A 90 TPFEKKVYEWLTKNVKRGSVI--------------TYGDLAKALNTSPRAVGGAMKRNPYPIVVPCHRVVAH 147 (174)
T ss_dssp CHHHHHHHHHHHHHSCTTCCE--------------EHHHHHHHTTSCHHHHHHHHHTCSCTTTSCGGGEEBT
T ss_pred ChHHHHHHHHHHccCCCCceE--------------eHHHHHHHhCCCHHHHHHHHHhCCCCCcCCcCeEECC
Confidence 579999999999 99985433 44444333 3778888999999999999997664
No 7
>1eh6_A O6-alkylguanine-DNA alkyltransferase; methyltransferase, DNA repair; 2.00A {Homo sapiens} SCOP: a.4.2.1 c.55.7.1 PDB: 1eh7_A 1eh8_A*
Probab=47.84 E-value=16 Score=33.70 Aligned_cols=53 Identities=25% Similarity=0.273 Sum_probs=41.3
Q ss_pred ccchHHH-HHHHhhCCCceEecceecCCCccccccchhhHHH------HHHHHHHHhhcCCCCccccccccCCC
Q psy16569 188 SHFYNQV-WDIMIRTPEGISVQGHILPQQPTLSNMTQSELTF------ALVAVWDIMIRTPEGISVQGHILPQQ 254 (385)
Q Consensus 188 ~~FY~~V-W~iL~~~p~Gl~I~g~~~~~~~~~~n~~~~~~~~------~~~~~~~~~~~~p~~i~~~~~~L~~~ 254 (385)
.+|..+| |+.|..-|.|=+. |-+|+-- |-++|=..|-+.|-.|.|++||.-..
T Consensus 92 t~Fq~~V~~~~l~~IP~G~~~--------------TYg~iA~~~G~p~a~RaVG~A~~~Np~~~~iPCHRVv~~ 151 (207)
T 1eh6_A 92 ESFTRQVLWKLLKVVKFGEVI--------------SYQQLAALAGNPKAARAVGGAMRGNPVPILIPCHRVVCS 151 (207)
T ss_dssp CCHHHHHHHHHHHHCCTTCCE--------------EHHHHHHHTTCTTCHHHHHHHTTSCSSBTTBCGGGEECT
T ss_pred CHHHHHHHHHHhhcCCCCcEE--------------CHHHHHHHHCCCCcHHHHHHHHHhCCCCCcCCCCeEECC
Confidence 4799999 9999999985443 3344432 45788888999999999999998765
No 8
>3l00_A SNAP-TAG; protein TAG, protein engineering, benzylguanine, benzylated transferase; HET: BCS; 1.70A {Homo sapiens} PDB: 3kzy_A* 3kzz_A* 1yfh_A* 1t39_A* 1qnt_A 1t38_A*
Probab=36.49 E-value=34 Score=30.97 Aligned_cols=53 Identities=25% Similarity=0.182 Sum_probs=39.8
Q ss_pred ccchHHHHH-HHhhCCCceEecceecCCCccccccchhhHHH------HHHHHHHHhhcCCCCccccccccCCC
Q psy16569 188 SHFYNQVWD-IMIRTPEGISVQGHILPQQPTLSNMTQSELTF------ALVAVWDIMIRTPEGISVQGHILPQQ 254 (385)
Q Consensus 188 ~~FY~~VW~-iL~~~p~Gl~I~g~~~~~~~~~~n~~~~~~~~------~~~~~~~~~~~~p~~i~~~~~~L~~~ 254 (385)
..|..+||. ++..-|.|=++ |-+|+-- |-++|=..|-+.|-.|.|++||.-..
T Consensus 95 t~Fq~~Vw~~ll~~IP~G~t~--------------tYg~iA~~~g~p~a~RaVG~A~~~Np~~i~iPCHRVv~~ 154 (182)
T 3l00_A 95 ESFTRQVLWKLLKVVKFGEVI--------------SYSHLAALAGNPAATAAVKTALSGNPVPILIPCHRVVQG 154 (182)
T ss_dssp CCHHHHHHHHHHHHCCTTCCE--------------EHHHHHHHTTCTTCHHHHHHHHHTCSSBTTBCGGGEESB
T ss_pred CHHHHHHHHHHHhhCCCCCEE--------------eHHHHHHHhCCCChHHHHHHHHHhCCCCCeeCceEEECC
Confidence 369999996 67788875433 3444432 45788889999999999999998765
No 9
>2q9r_A Protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.91A {Shewanella baltica}
Probab=23.19 E-value=1.1e+02 Score=28.24 Aligned_cols=99 Identities=12% Similarity=0.228 Sum_probs=65.6
Q ss_pred hhhHHHHHHHHHHHhhcCCCCccccccccCCCccccccCcchhhHHHHHHHHHcCCCCCc----c-hhHHHHHHHHHHHH
Q psy16569 223 QSELTFALVAVWDIMIRTPEGISVQGHILPQQPTLSNMTQSELTFALLIEEILNHITYPE----Y-RQIIVELLSIVSTI 297 (385)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~p~~i~~~~~~L~~~~tlseMT~gE~~FAl~VE~lLn~I~~PE----Y-RQl~VE~L~vl~~i 297 (385)
..-+.-+|-.||+.|. .+ ..+.||..+.|.+-..||.|+ | ---.+.|..+|+.+
T Consensus 47 ~~~~r~~LdlvWe~l~--------------~k-------~~kinfe~qLeklE~~iPd~~d~d~yGvyPA~DAc~ALs~~ 105 (200)
T 2q9r_A 47 PAVLSTALELLWQSLY--------------DP-------KLKFNIDVHLQRLEDNTPEPADFEAYGVYPAMDAVVAISTL 105 (200)
T ss_dssp HHHHHHHHHHHHHHHH--------------CT-------TCCCCHHHHHHHHHHTCCCGGGCCSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh--------------cc-------chhcCHHHHHHHHHhhCCChhhcccccccHHHHHHHHHHHH
Confidence 3457779999999542 11 246799999999999999987 1 11244777777766
Q ss_pred HhhCCCCccCCcccHHHHHHHHHHHhhhhhc---hhHHhHHHHhccCc
Q psy16569 298 LLRNPELSFRKQLDLDELVNNAYHMFCKDNN---IERKDMKSFYAAKQ 342 (385)
Q Consensus 298 ~e~np~l~f~~~i~ld~lv~~A~~~f~~d~~---~~~~~~~~Fy~~~P 342 (385)
+..=.+--.++.+++.++....+..|.+-+. .....++.|..+.|
T Consensus 106 l~~~~~~~~~~a~~iS~~S~~TVa~fie~q~~~e~~~~el~~~i~~h~ 153 (200)
T 2q9r_A 106 LGAIQGKIEEDIVNISKLSSSTVANYIEAISDVDLVDEALDDFVFAHE 153 (200)
T ss_dssp HHHHHHTCHHHHHTHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSH
T ss_pred HHhcccchHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHhhcccCh
Confidence 5443221225789999999999999886431 11445555544444
No 10
>3anw_B GINS23, putative uncharacterized protein; SLD5 superfamily, DNA replication, replication; 2.65A {Thermococcus kodakarensis}
Probab=22.68 E-value=32 Score=30.97 Aligned_cols=93 Identities=13% Similarity=0.054 Sum_probs=45.1
Q ss_pred ccccccCCccchHHHHHHHhhCCC--ceEecceecCCCccccccchhhHHHHHHHHHHHhhcCCCCcccc-ccccCCCcc
Q psy16569 180 EGCWCRVPSHFYNQVWDIMIRTPE--GISVQGHILPQQPTLSNMTQSELTFALVAVWDIMIRTPEGISVQ-GHILPQQPT 256 (385)
Q Consensus 180 ~GaLnRvP~~FY~~VW~iL~~~p~--Gl~I~g~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~i~~~-~~~L~~~~t 256 (385)
.=.|..+|.+||.+|=..+..-.. +=..++.. +.=++.-.||.=+-..+=++..+-=.=|..- ..+-.++..
T Consensus 71 ~~~L~~LP~dFY~rvr~yI~~Le~ei~~~~~~d~-----~~~~~kl~elk~~~~~l~~L~~~Ri~KIv~la~~~~~~~ei 145 (171)
T 3anw_B 71 SEPLTLLPEGLYERAEFYAYYLENYVRLNPRESV-----DTINVKLTKLANLRKKLRDLKLIRFNKILKAVMLRPNSLEL 145 (171)
T ss_dssp SSSCCCCCTTHHHHHHHHHHHHHHHTTCCC------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--CCHHH
T ss_pred cCccccCCHHHHHHHHHHHHHHHHHHHhccCcch-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 348899999999999887763310 00000110 0001111233333333222222211111000 001122345
Q ss_pred ccccCcchhhHHHHHHHHHcC
Q psy16569 257 LSNMTQSELTFALLIEEILNH 277 (385)
Q Consensus 257 lseMT~gE~~FAl~VE~lLn~ 277 (385)
++-|||.|..+...+...+|.
T Consensus 146 l~rLTpEEk~iy~~l~~~i~~ 166 (171)
T 3anw_B 146 LSRLAPEERRIYLQMSKIRNE 166 (171)
T ss_dssp HTTSCHHHHHHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHHHHHH
Confidence 788999999999998887764
No 11
>3f7c_A Protein of unknown function (DUF416); structural genomics, joint center for structural genomics, J protein structure initiative; HET: CIT; 2.00A {Marinobacter aquaeolei VT8}
Probab=20.26 E-value=2.8e+02 Score=25.37 Aligned_cols=117 Identities=13% Similarity=0.198 Sum_probs=74.4
Q ss_pred hhHHHHHHHHHHHhhcCCCCccccccccCCCccccccCcchhhHHHHHHHHHcCCCCCc----c-hhHHHHHHHHHHHHH
Q psy16569 224 SELTFALVAVWDIMIRTPEGISVQGHILPQQPTLSNMTQSELTFALLIEEILNHITYPE----Y-RQIIVELLSIVSTIL 298 (385)
Q Consensus 224 ~~~~~~~~~~~~~~~~~p~~i~~~~~~L~~~~tlseMT~gE~~FAl~VE~lLn~I~~PE----Y-RQl~VE~L~vl~~i~ 298 (385)
.-+.-+|-.||+. |..+ ....||..+.|.+=..||.|+ | ---.+.|..+|+.++
T Consensus 47 ~~~r~~LdlvWe~--------------L~~k-------~~kinfe~qLeklE~~~Pd~~dfd~yGvyPA~DAc~ALs~ll 105 (200)
T 3f7c_A 47 GKMRQLLDLAWDM--------------LQKD-------VADAAIPQLLSKLETLCPNVDEYDAYGVYPAFDFCQLLEQAL 105 (200)
T ss_dssp HHHHHHHHHHHHH--------------TTSC-------CCGGGHHHHHHHHHHHCCCGGGCCSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--------------Hhcc-------ccccCHHHHHHHHHhcCCChhhcccccchHHHHHHHHHHHHH
Confidence 4567799999994 3222 235799999999999999987 1 112347777777655
Q ss_pred hh--CCCCccCCcccHHHHHHHHHHHhhhhhchh---HH--------------------hHHHHhccCcchhhhHHHHHH
Q psy16569 299 LR--NPELSFRKQLDLDELVNNAYHMFCKDNNIE---RK--------------------DMKSFYAAKQSITTGYLARAV 353 (385)
Q Consensus 299 e~--np~l~f~~~i~ld~lv~~A~~~f~~d~~~~---~~--------------------~~~~Fy~~~P~~~~~yl~~Av 353 (385)
.. +++. ++.+++.++-...+..|.+-+... .. ++-.+-...|. ...=+.+++
T Consensus 106 ~~~~~~~~--~~a~~vS~lS~~TVa~f~e~~~~~el~~~el~~~~~~h~lm~~E~~~Q~~l~~~L~~~~~-~~~e~ik~L 182 (200)
T 3f7c_A 106 LNRLNPNK--HRATEASQLATRTVMDFVEMSEGEGMDENELVRVFEHHPLLKDDKLFQRDTVMALYYYRT-PKEAFLAEL 182 (200)
T ss_dssp HHHHCTTS--CCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCS-SHHHHHHHH
T ss_pred HHHHcCCH--HHHHHHHHHHHHHHHHHHHHhcCcCCCcHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCcc-CCHHHHHHH
Confidence 33 3333 788999999999999887543100 11 22222223332 344677888
Q ss_pred HHHHhcCCccc
Q psy16569 354 VNNVLKGGELA 364 (385)
Q Consensus 354 ~~~ll~~~~~~ 364 (385)
.+.+..+|+..
T Consensus 183 r~~~~~~GvSN 193 (200)
T 3f7c_A 183 RAGAANDGVSN 193 (200)
T ss_dssp HHHHHGGGCCT
T ss_pred HHHHHHcCccc
Confidence 88888877654
Done!