Query psy16572
Match_columns 65
No_of_seqs 242 out of 1073
Neff 9.7
Searched_HMMs 46136
Date Fri Aug 16 16:27:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16572.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16572hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0752|consensus 99.7 1.4E-16 3.1E-21 93.8 5.2 58 6-65 229-286 (320)
2 PTZ00169 ADP/ATP transporter o 99.6 3.6E-16 7.9E-21 91.2 5.6 56 8-65 218-273 (300)
3 KOG0754|consensus 99.6 3E-17 6.5E-22 93.6 0.7 57 7-65 14-70 (294)
4 KOG0752|consensus 99.6 3.2E-16 6.9E-21 92.3 4.7 53 6-65 132-184 (320)
5 PF00153 Mito_carr: Mitochondr 99.6 5.9E-16 1.3E-20 77.2 4.9 55 6-65 10-64 (95)
6 KOG0764|consensus 99.6 1.5E-16 3.4E-21 91.8 1.2 57 5-65 110-166 (299)
7 KOG0757|consensus 99.6 1.8E-16 4E-21 91.5 1.3 55 6-65 133-187 (319)
8 KOG0764|consensus 99.6 7.9E-16 1.7E-20 88.9 3.8 61 2-65 7-67 (299)
9 KOG0751|consensus 99.6 2.5E-16 5.5E-21 96.7 1.4 57 8-65 354-410 (694)
10 KOG0762|consensus 99.6 1.7E-15 3.6E-20 86.5 4.3 49 8-65 209-257 (311)
11 KOG0753|consensus 99.6 2.3E-15 5.1E-20 87.4 4.7 56 5-65 230-285 (317)
12 KOG0750|consensus 99.6 2.9E-15 6.2E-20 86.0 4.9 54 6-65 217-270 (304)
13 KOG0751|consensus 99.6 7.1E-16 1.5E-20 94.8 2.5 53 8-65 546-598 (694)
14 PTZ00169 ADP/ATP transporter o 99.6 4.5E-15 9.8E-20 86.7 5.5 56 6-65 119-174 (300)
15 KOG0758|consensus 99.6 4.2E-16 9.1E-21 90.4 0.9 52 6-65 19-70 (297)
16 KOG0760|consensus 99.5 9.2E-15 2E-19 84.3 4.3 52 5-65 116-167 (302)
17 PTZ00168 mitochondrial carrier 99.5 3.1E-14 6.8E-19 81.9 4.8 47 6-65 185-231 (259)
18 KOG0759|consensus 99.5 7.6E-14 1.7E-18 80.6 5.5 53 5-65 202-254 (286)
19 KOG0753|consensus 99.5 3.3E-14 7.2E-19 82.7 4.0 58 8-65 27-85 (317)
20 KOG0762|consensus 99.5 8.5E-16 1.8E-20 87.7 -2.7 52 8-65 20-71 (311)
21 KOG0768|consensus 99.5 4.4E-14 9.6E-19 82.9 4.1 52 7-65 234-285 (323)
22 PTZ00168 mitochondrial carrier 99.5 7.3E-14 1.6E-18 80.4 4.8 49 6-65 90-139 (259)
23 KOG0760|consensus 99.5 8E-14 1.7E-18 80.4 4.6 61 5-65 207-267 (302)
24 KOG0758|consensus 99.5 1.2E-13 2.6E-18 80.4 4.9 52 7-65 216-267 (297)
25 KOG0756|consensus 99.4 4.3E-14 9.3E-19 82.3 2.0 53 6-65 215-267 (299)
26 KOG0765|consensus 99.4 2E-13 4.4E-18 79.4 4.5 53 4-65 250-302 (333)
27 KOG0766|consensus 99.4 6.4E-14 1.4E-18 79.4 1.0 52 5-65 218-269 (297)
28 KOG0769|consensus 99.4 3.4E-13 7.5E-18 77.9 3.7 58 4-65 7-64 (308)
29 KOG0757|consensus 99.3 2.8E-12 6.2E-17 74.4 4.7 49 8-65 241-289 (319)
30 KOG0755|consensus 99.3 4.9E-13 1.1E-17 76.6 0.3 53 13-65 35-87 (320)
31 KOG0759|consensus 99.3 2.7E-12 5.8E-17 74.3 3.0 57 7-65 103-159 (286)
32 KOG0749|consensus 99.3 4.5E-12 9.7E-17 73.2 3.1 47 13-65 226-272 (298)
33 KOG0754|consensus 99.3 3.3E-12 7.2E-17 73.2 2.5 55 7-65 209-263 (294)
34 KOG0765|consensus 99.3 2.6E-12 5.7E-17 74.8 2.1 43 16-65 49-91 (333)
35 KOG0761|consensus 99.3 1.4E-12 3.1E-17 76.9 1.1 54 12-65 32-118 (361)
36 KOG0761|consensus 99.3 4.8E-12 1E-16 74.7 3.2 58 5-65 267-324 (361)
37 KOG0768|consensus 99.2 3.4E-11 7.4E-16 70.9 4.9 50 5-65 141-190 (323)
38 KOG0036|consensus 99.2 1.6E-11 3.4E-16 74.4 2.9 48 8-65 386-433 (463)
39 KOG0767|consensus 99.1 4.7E-12 1E-16 73.5 -1.4 49 8-65 42-94 (333)
40 KOG0749|consensus 99.1 1.7E-11 3.7E-16 70.8 -0.5 54 9-65 124-177 (298)
41 KOG0770|consensus 99.1 4.6E-10 9.9E-15 65.3 5.1 60 5-64 128-192 (353)
42 KOG0036|consensus 99.0 3.4E-10 7.3E-15 68.8 3.1 50 8-65 290-339 (463)
43 KOG0755|consensus 99.0 9.2E-11 2E-15 67.5 0.5 51 8-65 236-286 (320)
44 KOG0766|consensus 98.9 4.2E-10 9.2E-15 64.1 2.0 47 8-65 22-68 (297)
45 KOG0770|consensus 98.9 1.3E-10 2.9E-15 67.5 -0.0 50 9-65 41-91 (353)
46 KOG0763|consensus 98.9 1.7E-09 3.7E-14 61.7 3.8 58 8-65 120-177 (301)
47 KOG0763|consensus 98.9 6.7E-11 1.4E-15 67.3 -2.7 45 12-65 27-71 (301)
48 KOG0769|consensus 98.9 2.7E-09 5.8E-14 62.1 3.3 58 8-65 110-168 (308)
49 KOG0767|consensus 98.8 1.7E-09 3.7E-14 63.1 2.2 49 8-65 143-191 (333)
50 KOG2954|consensus 98.8 5.7E-09 1.2E-13 62.3 3.6 58 8-65 284-350 (427)
51 KOG0750|consensus 98.7 1.3E-09 2.9E-14 63.0 -0.6 57 6-65 14-75 (304)
52 KOG0756|consensus 98.5 1.3E-08 2.9E-13 59.7 -0.4 48 15-65 123-170 (299)
53 KOG2745|consensus 98.3 3.2E-07 6.9E-12 53.7 1.5 52 8-64 144-195 (321)
54 KOG1519|consensus 98.3 1.6E-06 3.5E-11 49.2 4.0 43 15-65 226-270 (297)
55 KOG2745|consensus 97.5 0.00036 7.8E-09 41.3 5.1 59 7-65 23-88 (321)
56 KOG2954|consensus 89.0 0.27 5.9E-06 30.4 1.5 50 13-65 79-128 (427)
57 KOG1519|consensus 88.4 0.94 2E-05 26.3 3.3 45 8-65 38-82 (297)
58 KOG1484|consensus 79.9 4.8 0.0001 25.0 3.9 39 17-63 254-294 (354)
59 PRK12482 flagellar motor prote 76.2 3 6.5E-05 25.2 2.3 56 8-63 37-97 (287)
60 PRK09110 flagellar motor prote 73.9 4.1 8.9E-05 24.5 2.5 56 8-63 37-97 (283)
61 PF00473 CRF: Corticotropin-re 64.5 6.4 0.00014 16.7 1.4 17 16-32 5-21 (39)
62 PRK06926 flagellar motor prote 60.7 8.4 0.00018 23.1 2.0 54 8-63 44-101 (271)
63 PF06043 Reo_P9: Reovirus P9-l 59.9 27 0.0006 21.4 4.0 36 12-60 237-272 (333)
64 COG1963 Uncharacterized protei 58.6 14 0.00031 20.3 2.4 26 5-30 14-39 (153)
65 TIGR03818 MotA1 flagellar moto 53.6 19 0.00041 21.7 2.7 56 8-63 37-97 (282)
66 PF09882 DUF2109: Predicted me 51.9 29 0.00063 17.0 2.7 23 4-26 32-54 (78)
67 KOG1746|consensus 50.9 36 0.00078 17.8 3.2 27 6-33 56-82 (115)
68 PRK06743 flagellar motor prote 50.4 16 0.00034 21.8 2.0 54 8-63 36-93 (254)
69 COG4297 Uncharacterized protei 50.0 11 0.00025 20.6 1.2 17 49-65 35-51 (163)
70 smart00039 CRF corticotropin-r 49.5 14 0.00031 15.7 1.3 16 17-32 7-22 (40)
71 PF10295 DUF2406: Uncharacteri 41.2 16 0.00035 17.5 0.9 8 19-26 55-62 (69)
72 PF13384 HTH_23: Homeodomain-l 40.5 12 0.00025 15.9 0.3 18 46-63 32-49 (50)
73 smart00263 LYZ1 Alpha-lactalbu 40.5 20 0.00044 19.1 1.3 17 47-63 91-107 (127)
74 KOG1431|consensus 39.8 16 0.00034 22.0 0.9 17 17-33 73-89 (315)
75 PF02109 DAD: DAD family; Int 34.6 74 0.0016 16.7 3.3 27 6-33 53-79 (112)
76 PF06837 Fijivirus_P9-2: Fijiv 34.2 29 0.00062 20.0 1.3 14 17-30 14-27 (214)
77 PF08133 Nuclease_act: Anticod 34.1 33 0.00071 13.0 1.1 17 47-63 9-25 (26)
78 PF13518 HTH_28: Helix-turn-he 33.8 36 0.00077 14.2 1.4 20 45-64 26-45 (52)
79 COG4075 Uncharacterized conser 33.7 26 0.00057 18.0 1.0 14 51-64 19-32 (110)
80 PF10126 Nit_Regul_Hom: Unchar 33.3 26 0.00057 18.3 1.0 14 51-64 19-32 (110)
81 PF06842 DUF1242: Protein of u 32.9 14 0.0003 15.4 -0.1 8 57-64 28-35 (36)
82 PF07172 GRP: Glycine rich pro 30.5 81 0.0018 15.9 3.2 28 1-28 1-28 (95)
83 PRK08990 flagellar motor prote 29.6 83 0.0018 18.7 2.8 21 8-28 38-59 (254)
84 COG3046 Uncharacterized protei 29.3 1.2E+02 0.0027 19.9 3.5 28 6-33 261-288 (505)
85 PF13467 RHH_4: Ribbon-helix-h 29.3 64 0.0014 15.2 1.9 16 45-60 20-35 (67)
86 PF12301 CD99L2: CD99 antigen 28.6 33 0.00072 19.2 0.9 20 8-27 116-135 (169)
87 PRK09109 motC flagellar motor 27.6 69 0.0015 18.9 2.2 22 8-29 39-61 (246)
88 PF12590 Acyl-thio_N: Acyl-ATP 27.4 77 0.0017 17.0 2.1 16 2-17 93-108 (129)
89 cd00119 LYZ1 C-type lysozyme ( 26.7 41 0.00089 17.9 1.1 17 47-63 88-105 (123)
90 COG4043 Preprotein translocase 26.0 56 0.0012 17.0 1.4 17 47-63 56-72 (111)
91 PF00440 TetR_N: Bacterial reg 25.1 69 0.0015 13.3 1.9 13 49-61 3-15 (47)
92 PF15033 Kinocilin: Kinocilin 25.0 54 0.0012 17.1 1.3 21 10-32 48-68 (124)
93 COG1993 PII-like signaling pro 24.4 69 0.0015 16.8 1.6 18 45-62 22-39 (109)
94 PF07037 DUF1323: Putative tra 24.4 40 0.00087 18.0 0.7 14 51-64 101-114 (122)
95 PF11784 DUF3320: Protein of u 24.2 82 0.0018 13.9 1.8 14 47-60 13-26 (52)
96 PF15162 DUF4580: Domain of un 24.1 1.2E+02 0.0026 17.0 2.6 20 13-32 122-142 (162)
97 COG5499 Predicted transcriptio 22.5 66 0.0014 17.0 1.3 14 20-33 61-74 (120)
98 PF05415 Peptidase_C36: Beet n 21.8 1.2E+02 0.0025 15.5 2.1 19 14-32 15-33 (104)
99 PRK00944 hypothetical protein; 21.6 63 0.0014 18.6 1.2 12 16-27 180-191 (195)
100 PF04217 DUF412: Protein of un 21.5 1E+02 0.0022 17.0 1.9 36 22-57 100-135 (143)
101 PF14307 Glyco_tran_WbsX: Glyc 21.4 82 0.0018 19.4 1.8 22 43-64 172-193 (345)
102 KOG2623|consensus 21.1 1.1E+02 0.0024 20.0 2.2 13 21-33 191-203 (467)
103 PF12156 ATPase-cat_bd: Putati 21.0 54 0.0012 16.1 0.8 18 48-65 32-49 (88)
104 PRK05973 replicative DNA helic 20.8 1.9E+02 0.004 17.1 3.1 37 18-62 4-40 (237)
105 PF00062 Lys: C-type lysozyme/ 20.5 1E+02 0.0022 16.4 1.8 18 46-63 90-108 (125)
106 PF08528 Whi5: Whi5 like; Int 20.1 67 0.0014 12.2 0.8 8 24-31 2-9 (25)
No 1
>KOG0752|consensus
Probab=99.66 E-value=1.4e-16 Score=93.79 Aligned_cols=58 Identities=26% Similarity=0.439 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 6 EILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 6 ~~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
..++||+++.+++||||+||.|||+.... ......+++++++|+++|+++||+.||||
T Consensus 229 ~GalAG~~aqti~yPlD~vRrrmQ~~~~~--~~~~~~~~~~~~~~~~~i~~~EG~~gLYk 286 (320)
T KOG0752|consen 229 CGALAGAVAQTITYPLDTVRRRMQLGGLK--YFGGGFRYKGVLDAFRQIVKTEGVKGLYK 286 (320)
T ss_pred HHHHHHHHHhhhcccHHHHHHHHhccCcc--ccccccccccHHHHHHHHHHHhhhhhhhc
Confidence 34788899999999999999999998753 11234456899999999999999999997
No 2
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional
Probab=99.65 E-value=3.6e-16 Score=91.24 Aligned_cols=56 Identities=18% Similarity=0.427 Sum_probs=45.5
Q ss_pred HHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 8 LFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 8 ~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.++|++++++++|+|+||+|+|.+... .......|+++++++++|+++||++||||
T Consensus 218 ~~~g~~a~~~t~P~dvvktRlq~~~~~--~~~~~~~y~~~~~~~~~i~~~eG~~gly~ 273 (300)
T PTZ00169 218 QTVTILAGLISYPFDTVRRRMMMMSGR--KAKSEIQYTGTLDCWKKILKNEGLGGFFK 273 (300)
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHhcCc--ccCCCcccCcHHHHHHHHHHHhchhHhhc
Confidence 455778889999999999999997531 00123478999999999999999999997
No 3
>KOG0754|consensus
Probab=99.64 E-value=3e-17 Score=93.57 Aligned_cols=57 Identities=26% Similarity=0.391 Sum_probs=48.0
Q ss_pred HHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 7 ILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 7 ~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
..+||++..++.||+|+||||||.|... +......|++++||+.+|+|.||+.+|||
T Consensus 14 Gg~AG~~Ev~~myPLDVVKTRmQlq~~~--~~~~~~~Y~g~~Dc~~Ki~k~EG~s~lyk 70 (294)
T KOG0754|consen 14 GGSAGFSEVCLMYPLDVVKTRMQLQVTT--PFGGEVHYNGVMDCLVKIVKNEGLSSLYK 70 (294)
T ss_pred ccccchhhheeecchhhheeeeeeeccc--CCCCccccccHHHHHHHHHHhcchhhhhc
Confidence 3567777888999999999999999653 12345689999999999999999999997
No 4
>KOG0752|consensus
Probab=99.64 E-value=3.2e-16 Score=92.31 Aligned_cols=53 Identities=30% Similarity=0.570 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 6 EILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 6 ~~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
...+||+++++++||+|++|||+-+|.+. ..|+++++++++|+++||++||||
T Consensus 132 aGalAG~~a~~~tyPLDlvRtRLa~q~~~-------~~y~~l~~a~~~I~~~eGi~gfYr 184 (320)
T KOG0752|consen 132 AGALAGMTATLATYPLDLLRTRLAVQGEL-------KVYRGLLHAFKTIYREEGIRGFYR 184 (320)
T ss_pred HHHHHHHHHHHhcCcHHHhhhheeeeccc-------ccCCcHHHHHHHHHHhcchhhhhc
Confidence 45788899999999999999999998763 379999999999999999999997
No 5
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ]. Such proteins include: ADP, ATP carrier protein (ADP/ATP translocase); 2-oxoglutarate/malate carrier protein; phosphate carrier protein; tricarboxylate transport protein (or citrate transport protein); Graves disease carrier protein; yeast mitochondrial proteins MRS3 and MRS4; yeast mitochondrial FAD carrier protein; and many others. Structurally, these proteins can consist of up to three tandem repeats of a domain of approximately 100 residues, each domain containing two transmembrane regions.; PDB: 2LCK_A 2C3E_A 1OKC_A.
Probab=99.64 E-value=5.9e-16 Score=77.17 Aligned_cols=55 Identities=29% Similarity=0.492 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 6 EILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 6 ~~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
..++||+++.++++|+|++|+|+|.... .....+.++++++++++++||++||||
T Consensus 10 ~g~~ag~~~~~~~~Pld~ik~~~q~~~~-----~~~~~~~~~~~~~~~i~~~~G~~~ly~ 64 (95)
T PF00153_consen 10 AGALAGAISTLVTYPLDTIKTRMQSESP-----SGKQPYQGVWQCLRKIYKEEGIRGLYR 64 (95)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHCCSC-----CCCSS-SSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhHHHHHhHhhccccc-----ccccccccccccccccchhhhhccccC
Confidence 4577888889999999999999992221 124578899999999999999999996
No 6
>KOG0764|consensus
Probab=99.61 E-value=1.5e-16 Score=91.78 Aligned_cols=57 Identities=33% Similarity=0.457 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 5 NEILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 5 ~~~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.+.+.||++..++|+|+.++|||++.|.... ....|+++++++++|+++||++||||
T Consensus 110 ~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~~----~~~~Y~~~f~a~rki~k~EG~rgLY~ 166 (299)
T KOG0764|consen 110 SSAAEAGAATTILTNPIWVVKTRLMLQSKNV----QSTAYKGMFDALRKIYKEEGFRGLYK 166 (299)
T ss_pred HHHHhhhHHHHHhcCCeEEEeehhhhhcccc----cccccccHHHHHHHHHHHHhHHHHHh
Confidence 3557788889999999999999999987642 23689999999999999999999996
No 7
>KOG0757|consensus
Probab=99.60 E-value=1.8e-16 Score=91.47 Aligned_cols=55 Identities=24% Similarity=0.321 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 6 EILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 6 ~~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
+.+.||++....++|+++||||||.+... ...+|.+.++|+++++++||++||||
T Consensus 133 sAasAgf~tstatNPIWlVKTRlQLd~~~-----~g~~~~~~~qc~~~Vy~~EG~rGfYk 187 (319)
T KOG0757|consen 133 AAASAGFATSTATNPIWLVKTRLQLDQKS-----RGSQYMNVWQCIRRVYHTEGFRGFYK 187 (319)
T ss_pred HHhhhHHHHhhccCceEEEeehhhhhccc-----CCcccccHHHHHHHHHHhhhhhHHhh
Confidence 44667788888999999999999998763 23689999999999999999999997
No 8
>KOG0764|consensus
Probab=99.60 E-value=7.9e-16 Score=88.90 Aligned_cols=61 Identities=23% Similarity=0.300 Sum_probs=52.5
Q ss_pred CChHHHHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 2 LGDNEILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 2 ~~~~~~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.|.++.++||++++++++|+|++|+|+|++... ....+.|+++++++++|+|.||++||||
T Consensus 7 ~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~---~~~~~~y~g~~~~~~tI~r~eG~rGLY~ 67 (299)
T KOG0764|consen 7 EPLIAGLSAGFASTLVVHPLDLVKIRFQASDGR---TSLRPAYKGIFGALKTIFRSEGLRGLYR 67 (299)
T ss_pred hhhhhhhhhhhhhhhhccchhHhhhhhhhccCc---cccchhhccHHHHHHHHHHhhhHHHHhc
Confidence 356788899999999999999999999999432 1235689999999999999999999997
No 9
>KOG0751|consensus
Probab=99.60 E-value=2.5e-16 Score=96.72 Aligned_cols=57 Identities=28% Similarity=0.440 Sum_probs=48.4
Q ss_pred HHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 8 LFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 8 ~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.+||+++.+++||+|+||||||.|.... .-..+..|++.+||++++++.||+.||||
T Consensus 354 SvAGavGATaVYPIDlvKTRMQnQRs~g-s~vge~~YkNS~DCfkKv~r~EG~~GLYr 410 (694)
T KOG0751|consen 354 SVAGAVGATAVYPIDLVKTRMQNQRSSG-SFVGELMYKNSFDCFKKVLRYEGFFGLYR 410 (694)
T ss_pred hhhccccceeEeeHHHHHHHHHhhcccc-ceeehhhhcchHHHHHHHHhhhhHHHHHh
Confidence 5788888999999999999999997631 11235689999999999999999999997
No 10
>KOG0762|consensus
Probab=99.59 E-value=1.7e-15 Score=86.52 Aligned_cols=49 Identities=24% Similarity=0.491 Sum_probs=44.9
Q ss_pred HHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 8 LFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 8 ~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
-.||+++++.+||+|+||+|+|.+.. .|+++.||+++-+++||++.|||
T Consensus 209 G~aGm~SWla~Yp~DVVKtrlQad~~---------~Y~g~~dC~~ks~r~eG~r~f~r 257 (311)
T KOG0762|consen 209 GTAGMASWLACYPLDVVKTRLQADHL---------AYEGIADCFRKSYRQEGYRVFFR 257 (311)
T ss_pred chhhHHHHHHhccHHHHHHHHhcccc---------chhhHHHHHHHHHHhcCceeehh
Confidence 45778999999999999999998865 79999999999999999999986
No 11
>KOG0753|consensus
Probab=99.59 E-value=2.3e-15 Score=87.43 Aligned_cols=56 Identities=30% Similarity=0.445 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 5 NEILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 5 ~~~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.+.+.||++++++..|.|||||||..|+. .....|++..||+.+++++||+.+|||
T Consensus 230 vSs~~AGl~aai~s~P~DVVKTRmMNqp~-----g~~~~Ykgs~DC~~k~v~~EG~~AlYK 285 (317)
T KOG0753|consen 230 VSSFCAGLAAAILSSPVDVVKTRMMNQPP-----GRGGLYKGSLDCLIKTVKNEGFFALYK 285 (317)
T ss_pred HHHHHHHHHHHHhcCcHHHHHhhhccCCC-----CcCccccchHHHHHHHHHhcChHHHHc
Confidence 57789999999999999999999999976 235689999999999999999999997
No 12
>KOG0750|consensus
Probab=99.58 E-value=2.9e-15 Score=86.03 Aligned_cols=54 Identities=26% Similarity=0.383 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 6 EILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 6 ~~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
+.+++|..+.+++.|+||||||+|.-.. ++..|+++++|+++++++||+.+|||
T Consensus 217 agl~~gs~sa~~vtPlDVvKTRiQ~~~~------ned~~~gi~d~~~~~lk~EGptAffK 270 (304)
T KOG0750|consen 217 AGLVAGSASAIVVTPLDVVKTRIQTLGD------NEDNYKGIFDCVKNTLKNEGPTAFFK 270 (304)
T ss_pred HHHHhhhhhhhhcccHHHHHHHHhhccc------CccccccHHHHHHHHHHhhChHHHhc
Confidence 4467778888999999999999996532 24589999999999999999999986
No 13
>KOG0751|consensus
Probab=99.58 E-value=7.1e-16 Score=94.80 Aligned_cols=53 Identities=26% Similarity=0.384 Sum_probs=45.5
Q ss_pred HHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 8 LFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 8 ~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
++||+-+..++.|.||||||+|+... ..+..|.|+++|+|+|+++||+++|||
T Consensus 546 aiAGvPAA~LvTPaDVIKTRLQvaaR-----aGqTtYnGv~d~~rkilkEEgp~afwK 598 (694)
T KOG0751|consen 546 AIAGVPAASLVTPADVIKTRLQVAAR-----AGQTTYNGVIDCFRKILKEEGPRAFWK 598 (694)
T ss_pred HhcCCchhhcCCHHHHHHHHheeccc-----cCCceechHHHHHHHHHHhhChHhhhc
Confidence 45555567889999999999999865 246689999999999999999999997
No 14
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional
Probab=99.58 E-value=4.5e-15 Score=86.66 Aligned_cols=56 Identities=27% Similarity=0.418 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 6 EILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 6 ~~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
+.++||++++++++|+|+||+|+|.+... .....|+++++++++|+++||++||||
T Consensus 119 aG~~ag~~~~~~~~P~d~vk~r~q~~~~~----~~~~~~~~~~~~~~~i~~~eG~~glyr 174 (300)
T PTZ00169 119 SGGLAGASSLLIVYPLDFARTRLASDIGK----GGDREFTGLFDCLMKISKQTGFLSLYQ 174 (300)
T ss_pred HHHHHHHHHHHHhChHHHHHHHHHhhccc----CccccCCCHHHHHHHHHHhhchHHhhc
Confidence 44678888899999999999999987431 113468999999999999999999997
No 15
>KOG0758|consensus
Probab=99.57 E-value=4.2e-16 Score=90.44 Aligned_cols=52 Identities=27% Similarity=0.380 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 6 EILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 6 ~~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
...++|++..++.||||+||+|+|.++.. .|++.++|+++++++||++||||
T Consensus 19 AG~~gG~~~vlVGhPfDTvKVRlQt~~~~--------~y~~~~~c~~~t~~~Eg~~GfYk 70 (297)
T KOG0758|consen 19 AGGVGGAAQVLVGHPFDTVKVRLQTQNTP--------VYKGTLDCVKKTLKNEGVKGFYK 70 (297)
T ss_pred HhhhhhhhhhhccCCccceEEeeeccCCC--------CcccHHHHHHHHHHhcchhhhhc
Confidence 34667788889999999999999999874 49999999999999999999997
No 16
>KOG0760|consensus
Probab=99.54 E-value=9.2e-15 Score=84.25 Aligned_cols=52 Identities=23% Similarity=0.356 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 5 NEILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 5 ~~~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
++..+|-+++..+..|+|+||.|||.... .|++.++|++.++|+||+.+|||
T Consensus 116 isG~~At~~sDAvm~P~dvVKQR~Qm~~~---------~y~sv~~ci~~v~r~EGl~AFYr 167 (302)
T KOG0760|consen 116 ISGACATLISDAVMNPFDVVKQRMQMYNS---------PYKSVWDCIRTVYRNEGLGAFYR 167 (302)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHhcccC---------CCccHHHHHHHHHHhcchhHhhh
Confidence 34445555566788999999999999865 79999999999999999999996
No 17
>PTZ00168 mitochondrial carrier protein; Provisional
Probab=99.51 E-value=3.1e-14 Score=81.92 Aligned_cols=47 Identities=19% Similarity=0.339 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 6 EILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 6 ~~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
..++||++++++++|+|+||||+|.+. ++..++++++ ++||++||||
T Consensus 185 aG~~ag~~a~~~t~P~DvvKtr~q~~~------------~~~~~~~~~i-~~eG~~glyr 231 (259)
T PTZ00168 185 CGGLAGGIAGFLTTPVDVIKSRQIIYG------------KSYIETVTEI-AEEGYLTFYK 231 (259)
T ss_pred HHHHHHHHHHHhCChHHHHHHHHHhcc------------ccHHHHHHHH-HHhCHHHHHc
Confidence 447788889999999999999999863 2568999999 9999999997
No 18
>KOG0759|consensus
Probab=99.49 E-value=7.6e-14 Score=80.62 Aligned_cols=53 Identities=25% Similarity=0.466 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 5 NEILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 5 ~~~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
...++||.++++++.|+|++|||+|..... .|++.+||+.++.|+||+.+|||
T Consensus 202 ~aS~~aG~vatv~s~PlDv~KTr~mN~~~~--------~y~g~~d~~~k~~k~eG~~~~~k 254 (286)
T KOG0759|consen 202 IASMIAGLVATVISQPLDVLKTRIMNMKPG--------EYKGLLDVLVKTVKKEGPLGFFK 254 (286)
T ss_pred HHHHHHHHHHHHhcChHHHHHHHHhhcCcc--------ccccHHHHHHHHHHHcCcchhhc
Confidence 356889999999999999999999988753 49999999999999999999997
No 19
>KOG0753|consensus
Probab=99.49 E-value=3.3e-14 Score=82.70 Aligned_cols=58 Identities=43% Similarity=0.705 Sum_probs=47.3
Q ss_pred HHHHHHHHHhhccHHHHHHHHhhcccccchhhhc-ccCCCHHHHHHHHHHhhccccccC
Q psy16572 8 LFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAK-LKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 8 ~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~-~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.+|..++-++++|+|+.|||||+|++........ .+|+++++.+..|.|+||+++||+
T Consensus 27 ~~aA~vAE~~TfPlD~tKtRLQiQGe~~~~~~~~~~~YrG~~~t~~~i~ReEG~~~Ly~ 85 (317)
T KOG0753|consen 27 GTAACVAELVTFPLDTTKTRLQIQGESAAAVFKKGAKYRGMLGTILTIVREEGLLSLYS 85 (317)
T ss_pred HHHHHHHHHhccccchhhhhhhccccccccccccccccccHHHHHHHHHHHhhhhhhhc
Confidence 4555666788999999999999998754332222 589999999999999999999985
No 20
>KOG0762|consensus
Probab=99.48 E-value=8.5e-16 Score=87.69 Aligned_cols=52 Identities=33% Similarity=0.498 Sum_probs=45.7
Q ss_pred HHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 8 LFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 8 ~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.++|++..++.||+|++|+|+|.|+.. .++|++.++|++.|++.||++||||
T Consensus 20 ~~GGvAGVl~GhPlDTvkVrlQtqs~~------~PqYrgtfhcfr~ivq~e~~~gLYr 71 (311)
T KOG0762|consen 20 GLGGVAGVLVGHPLDTVKVRLQTQSSK------SPQYRGTFHCFRRIVQIEGFSGLYR 71 (311)
T ss_pred cccccceeeecCCcceeEEEEeccCCC------CCccCchhHHHHHHHHHhhhhHHhh
Confidence 345566778899999999999998764 5699999999999999999999997
No 21
>KOG0768|consensus
Probab=99.48 E-value=4.4e-14 Score=82.89 Aligned_cols=52 Identities=23% Similarity=0.305 Sum_probs=44.7
Q ss_pred HHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 7 ILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 7 ~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.++||.++..++.|+|+||||||++... ..+.++..++++|+++||+.|||+
T Consensus 234 Ga~AG~itA~lTTPlDViKTRiM~~~~~-------~~~~~~~~~i~~I~~eeG~~gl~k 285 (323)
T KOG0768|consen 234 GALAGGITAALTTPLDVIKTRIMLAKHG-------RSCSTLLRVIKSIYREEGFAGLFK 285 (323)
T ss_pred HHHhhhHHhhcCChHHHHHHHHhhcccc-------cchhHHHHHHHHHHHhcchHHHhh
Confidence 3677888889999999999999998763 345558999999999999999986
No 22
>PTZ00168 mitochondrial carrier protein; Provisional
Probab=99.48 E-value=7.3e-14 Score=80.41 Aligned_cols=49 Identities=18% Similarity=0.342 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhcccc-ccC
Q psy16572 6 EILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWA-LYS 65 (65)
Q Consensus 6 ~~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~g-lyr 65 (65)
..++||++++++++|+|+||+|+|.+.. .++++++++|+++||++| |||
T Consensus 90 ag~~Ag~~a~~~~~P~dvvKtRlQ~~~~-----------~~~~~~~~~i~~~eG~~g~~y~ 139 (259)
T PTZ00168 90 STSIAEITACIVRLPFEIVKQNMQVSGN-----------ISVLKTIYEITQREGLPSFLGK 139 (259)
T ss_pred HHHHHHHhhheeeChHHHHHHHHHhcCC-----------CcHHHHHHHHHHccCccccccc
Confidence 3467778888999999999999998742 479999999999999997 565
No 23
>KOG0760|consensus
Probab=99.47 E-value=8e-14 Score=80.43 Aligned_cols=61 Identities=26% Similarity=0.283 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 5 NEILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 5 ~~~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
+...+||.+++.++.|||+|||++|++...........+..++.+.+|.|++..|++||||
T Consensus 207 i~GalaGa~Aaa~TTPLDvvKT~Lq~q~s~~~~~~~~~k~~gi~~a~R~Iy~~~G~~gf~r 267 (302)
T KOG0760|consen 207 IAGALAGALAAALTTPLDVVKTLLQTQGSSALSILIRRKASGISDAFRTIYQKHGVKGFFR 267 (302)
T ss_pred HhhhhhHHHHHHhCCcHHHHHHHHHhhcchhhHHHHHHhhccHHHHHHHHHHhcCchhhhh
Confidence 3457778888899999999999999997643222345678899999999999999999986
No 24
>KOG0758|consensus
Probab=99.46 E-value=1.2e-13 Score=80.36 Aligned_cols=52 Identities=25% Similarity=0.385 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 7 ILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 7 ~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
..+||++.+.+++|+|++|+|+|.+++. ....++.++.++|+++||++||||
T Consensus 216 Gg~aG~a~W~~v~P~DvvKS~iQt~~~~-------~~~~~~~~~~k~i~~~~G~k~~yr 267 (297)
T KOG0758|consen 216 GGLAGIAFWLAVFPFDVVKSRLQTDPKP-------TYKNSIRSVAKKIYRKEGLKGFYR 267 (297)
T ss_pred hhHHHHhhHhhhccHHHHHHHHhcCCCC-------CccccHHHHHHHHHHhhchhhhhc
Confidence 3567778889999999999999999552 244577779999999999999997
No 25
>KOG0756|consensus
Probab=99.44 E-value=4.3e-14 Score=82.26 Aligned_cols=53 Identities=30% Similarity=0.404 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 6 EILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 6 ~~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
..++||.++.+-+.|+|+||||||..... ..++++.+|+.+|+++||+++|||
T Consensus 215 ~gaiaGa~sv~~~~PiDvvktRMqsl~s~-------~~~~~t~~~~~~I~k~eGlkafyk 267 (299)
T KOG0756|consen 215 SGAIAGAASVFGTQPIDVVKTRMQSLKSD-------KEYKQTIDCAYQILKSEGLKAFYK 267 (299)
T ss_pred hhhhccccccccCCCcHHHHHHhhhhhcc-------ccccchHHHhHHHHHhhhHHHHhc
Confidence 44677777788889999999999988653 345559999999999999999997
No 26
>KOG0765|consensus
Probab=99.43 E-value=2e-13 Score=79.40 Aligned_cols=53 Identities=25% Similarity=0.313 Sum_probs=46.3
Q ss_pred hHHHHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 4 DNEILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 4 ~~~~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
+.+..+||.+++++|+|+|+||||+|+.... +..+.+.+++++++||+.+|||
T Consensus 250 avsg~lag~tsti~TnPlD~irtRLQV~~~~---------~~~~~qt~r~L~~Eeg~~~f~k 302 (333)
T KOG0765|consen 250 AVSGALAGATSTILTNPLDTIRTRLQVHRGE---------SMPIIQTVRTLLREEGWAGFYK 302 (333)
T ss_pred ehhhhhhhhhHHHhcCcHHHHHHHHhhcccc---------cchHHHHHHHHHHhcCceeeec
Confidence 4567899999999999999999999998763 2346799999999999999997
No 27
>KOG0766|consensus
Probab=99.40 E-value=6.4e-14 Score=79.43 Aligned_cols=52 Identities=23% Similarity=0.473 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 5 NEILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 5 ~~~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.+.+++|+.++.++.|+|+||||||..+. +|.++.+.+..|+++||++|||.
T Consensus 218 ~sgi~sg~lAt~vT~Pfd~iKTrmQLeP~---------kf~n~~~~~tli~kneg~rgff~ 269 (297)
T KOG0766|consen 218 SSGIFSGILATLVTQPFDVIKTRMQLEPL---------KFQNIGQAVTLIFKNEGLRGFFQ 269 (297)
T ss_pred hHHHHHHHHHHHhcCchhhhhhhhccchH---------HhhhhhhheeeeeccccHHHHhh
Confidence 46689999999999999999999999876 78999999999999999999873
No 28
>KOG0769|consensus
Probab=99.39 E-value=3.4e-13 Score=77.92 Aligned_cols=58 Identities=31% Similarity=0.476 Sum_probs=49.8
Q ss_pred hHHHHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 4 DNEILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 4 ~~~~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
+.+.+++++++..++||+|++|+|+|.+... .+..+|++..+++.+|+++||+.+||+
T Consensus 7 A~sGAvGs~iA~t~~YPLDT~ksr~Q~e~~~----~~~~k~r~t~dvm~eiik~eg~lsLYq 64 (308)
T KOG0769|consen 7 ALSGAVGSLIAMTIFYPLDTVKSRLQAEVRV----RGQRKYRYTSDVMWEIIKEEGVLSLYQ 64 (308)
T ss_pred HhhhhHHHHHHHHhhcchHHHHHHHHHHHHh----hhccchhHHHHHHHHHHhccchHHHhc
Confidence 4566788889999999999999999998631 235689999999999999999999996
No 29
>KOG0757|consensus
Probab=99.32 E-value=2.8e-12 Score=74.38 Aligned_cols=49 Identities=29% Similarity=0.560 Sum_probs=43.9
Q ss_pred HHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 8 LFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 8 ~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.+|..+++.++||-||||||++-+.. +|+++++|++.++++||..||||
T Consensus 241 ~~aK~~As~iaYPHEVvRTRLReeg~---------KY~gfvqt~~~v~keEG~~~lYr 289 (319)
T KOG0757|consen 241 GLAKFIASIIAYPHEVVRTRLREEGT---------KYTGFVQTLKLVFKEEGYPGLYR 289 (319)
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHhcc---------chhhHHHHHHHHHHhcChHHHHh
Confidence 45557888999999999999997744 89999999999999999999996
No 30
>KOG0755|consensus
Probab=99.29 E-value=4.9e-13 Score=76.65 Aligned_cols=53 Identities=25% Similarity=0.340 Sum_probs=44.4
Q ss_pred HHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 13 LLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 13 ~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.+.++++|+|+||||+|.|++..........|+++.+.+..|.|+||++||-|
T Consensus 35 gA~~~TNPiEvIKtRiQLQGelaa~g~~a~~YKsv~qaf~~iakneGI~GLQk 87 (320)
T KOG0755|consen 35 GAVTFTNPIEVIKTRIQLQGELAARGPSARPYKSVGQAFSTIAKNEGIRGLQK 87 (320)
T ss_pred eeeEecChHHHhhhhhhhhhhhhccCCccchhhhhhhhhhhhhcccchHHHhc
Confidence 34578999999999999998765444456689999999999999999999843
No 31
>KOG0759|consensus
Probab=99.28 E-value=2.7e-12 Score=74.34 Aligned_cols=57 Identities=25% Similarity=0.368 Sum_probs=50.5
Q ss_pred HHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 7 ILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 7 ~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.++||+++.++..|.|++-+|||.+... +...+++|++.+|.+.+|+|+||+..|||
T Consensus 103 g~~AGa~Gg~vGtPadv~~VRMQ~D~~L--P~~~RRNYknv~dgL~rI~reEG~~~L~~ 159 (286)
T KOG0759|consen 103 GGIAGAIGGVVGTPADVANVRMQADGRL--PPEQRRNYKNVFDGLVRITREEGVTALFR 159 (286)
T ss_pred HHHHHHhhhhcCCHHHHHHHHHhccCCC--CHHHhhhhhhHhhHHhhhhhhhhHHHHHc
Confidence 3788899999999999999999998653 34567899999999999999999999986
No 32
>KOG0749|consensus
Probab=99.26 E-value=4.5e-12 Score=73.20 Aligned_cols=47 Identities=28% Similarity=0.462 Sum_probs=38.7
Q ss_pred HHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 13 LLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 13 ~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.+.+++||+|+||.||..... ...+|++++||+++|+++||..+|||
T Consensus 226 ~ag~~sYP~DTVRRRmm~~~~------~~~~Y~~TldC~rkI~k~EG~~affk 272 (298)
T KOG0749|consen 226 GAGLLSYPLDTVRRRMMQSKG------ADLKYTGTLDCWRKIYKEEGGKAFFK 272 (298)
T ss_pred hcccccccchHHHHHHhhccC------cccccCcHHHHHHHHHHHhchHHHhh
Confidence 345678999999999543332 25689999999999999999999986
No 33
>KOG0754|consensus
Probab=99.26 E-value=3.3e-12 Score=73.23 Aligned_cols=55 Identities=29% Similarity=0.376 Sum_probs=46.8
Q ss_pred HHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 7 ILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 7 ~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.++||.+++++..|+|++|.|+|.... .....+|+..+..+..++|+||+++|||
T Consensus 209 g~l~gtla~~ln~pfDVaKsRIQgpqp----~~~~~KY~wt~~ti~~vyrEEGF~ALYK 263 (294)
T KOG0754|consen 209 GALAGTLACVLNTPFDVAKSRIQGPQP----VPGERKYNWTLPTILTVYREEGFRALYK 263 (294)
T ss_pred HHhhhhhhhhccChhHHhHhhccCCCC----CCCeeccceechHHHHHHHHhhHHHHHh
Confidence 467888889999999999999997322 1346789999999999999999999996
No 34
>KOG0765|consensus
Probab=99.26 E-value=2.6e-12 Score=74.85 Aligned_cols=43 Identities=37% Similarity=0.594 Sum_probs=39.3
Q ss_pred HhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 16 IGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 16 ~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
...||+.++|||+|++.. +..|++++++..+|+|.||++||||
T Consensus 49 ~aLYP~~vlkTrlQVq~~-------~~vyrs~f~~~~~I~r~eG~~GLYR 91 (333)
T KOG0765|consen 49 TALYPLTVLKTRLQVQKK-------NTVYRSTFDAASKILRREGVRGLYR 91 (333)
T ss_pred eeeeehhhhhhHHhhccc-------cchhHHHHHHHHHHHHhcCCchhhh
Confidence 467999999999999986 3579999999999999999999997
No 35
>KOG0761|consensus
Probab=99.26 E-value=1.4e-12 Score=76.87 Aligned_cols=54 Identities=30% Similarity=0.521 Sum_probs=42.1
Q ss_pred HHHHHhhccHHHHHHHHhhccccc--------c-------h------------------hhhcccCCCHHHHHHHHHHhh
Q psy16572 12 LLLSIGTFPIDTAKTRLQVQGQQL--------D-------Q------------------QYAKLKYRGMTDVLLQISRKD 58 (65)
Q Consensus 12 ~~~~~~~~P~d~iktr~q~~~~~~--------~-------~------------------~~~~~~~~~~~~~~~~i~~~e 58 (65)
++.+++..|+||||+|||.|.... . + .....+|+|.+|.+.+|.|+|
T Consensus 32 viTs~~vtPLDVVKtRLQaQ~~~~~~~~~~~~~~kcf~~~N~l~~~L~~s~~~g~~~~~~~~~~qf~GT~Daf~KI~RhE 111 (361)
T KOG0761|consen 32 VITSLIVTPLDVVKTRLQAQAAPMSYSHSNSPGGKCFFYSNGLMQHLRSSGIEGKESICPKDPGQFKGTLDAFTKIARHE 111 (361)
T ss_pred eeeeeecchHHHHHHHHHhccCCCCcccccCcCcceeeecCccchhhhcccccCccccCCCCccccCChHHHHHHHHHhh
Confidence 446678899999999999986541 0 0 012347999999999999999
Q ss_pred ccccccC
Q psy16572 59 GFWALYS 65 (65)
Q Consensus 59 G~~glyr 65 (65)
|++.||+
T Consensus 112 GirsLWs 118 (361)
T KOG0761|consen 112 GIRSLWS 118 (361)
T ss_pred hhhhhhc
Confidence 9999885
No 36
>KOG0761|consensus
Probab=99.26 E-value=4.8e-12 Score=74.72 Aligned_cols=58 Identities=28% Similarity=0.301 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 5 NEILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 5 ~~~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.+.++||.+++++|+||||+|||-|++... ...+...++.+..+..||+++|++|||.
T Consensus 267 ~sG~iaGtvAAi~T~PfDV~KT~~QI~~~~---~~~~~~~~st~~~l~~i~~~~G~~~L~s 324 (361)
T KOG0761|consen 267 VSGFIAGTVAAIATCPFDVVKTRRQIEGGT---SDDDRMTRSTFMTLKTIWRTGGLKGLFS 324 (361)
T ss_pred hhhhHHHHHHHHHcCCchhhhHHHHHhcCC---CCCccccchhhhhhHHHHHccchhhhhh
Confidence 466899999999999999999999998652 1234456788888999999999999984
No 37
>KOG0768|consensus
Probab=99.20 E-value=3.4e-11 Score=70.94 Aligned_cols=50 Identities=24% Similarity=0.354 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 5 NEILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 5 ~~~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.+..+++++++.+-.|.|++|.|+|+... .+..+.++.|+++||++||||
T Consensus 141 ~A~slg~i~a~~irvP~EvvKQR~Q~~~~-----------~~~~~~~~~i~~~~G~~GlYr 190 (323)
T KOG0768|consen 141 VAGSLGEIVACLIRVPTEVVKQRAQAGQF-----------ERLCQILRSIISKEGFRGLYR 190 (323)
T ss_pred HHHHHHHHHHHhhhchHHHHHHHHHhhcc-----------chHHHHHHHHHHhhccchhhh
Confidence 45678888899999999999999998865 358999999999999999997
No 38
>KOG0036|consensus
Probab=99.18 E-value=1.6e-11 Score=74.40 Aligned_cols=48 Identities=25% Similarity=0.418 Sum_probs=42.6
Q ss_pred HHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 8 LFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 8 ~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.+++.++.+.+||+.+||||||.++. +.++.+|+++++++||++||||
T Consensus 386 t~S~tcGq~~syPL~lVRTRmQaq~~----------~~tm~g~f~~~l~~eG~~glyr 433 (463)
T KOG0036|consen 386 TISGTCGQTASYPLALVRTRMQAQGG----------KDTMSGCFQWTLRNEGFRGLYR 433 (463)
T ss_pred chhhhhcccccCcHHHHHHHHhccCC----------CCcHHHHHHHHHHhhhHHHHHh
Confidence 45667778899999999999999975 4689999999999999999997
No 39
>KOG0767|consensus
Probab=99.11 E-value=4.7e-12 Score=73.51 Aligned_cols=49 Identities=24% Similarity=0.364 Sum_probs=41.0
Q ss_pred HHHHHHHHH----hhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 8 LFGCLLLSI----GTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 8 ~~ag~~~~~----~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.++|++++- ...|+|+||+|||+++. +|+++.+.++.++++||++||||
T Consensus 42 ~lgG~lsCG~TH~aitPLDlvKcrmQv~P~---------kY~~~~~GFk~~iaeeG~rgl~~ 94 (333)
T KOG0767|consen 42 TLGGILSCGTTHTAITPLDLVKCRMQVDPA---------KYKSIVQGFKVTIAEEGVRGLAR 94 (333)
T ss_pred hhcceeccccccccccchhheeeeeeeChh---------hhccchhHHHHHHHhhhhHHHHh
Confidence 445555543 45599999999999987 79999999999999999999986
No 40
>KOG0749|consensus
Probab=99.06 E-value=1.7e-11 Score=70.84 Aligned_cols=54 Identities=26% Similarity=0.401 Sum_probs=44.5
Q ss_pred HHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 9 FGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 9 ~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.||..+.+++||||.++||+-.+... ...+++|+++.||+++|.+.+|+.||||
T Consensus 124 aaGatsL~fVYpLDfarTRLaaD~gk---~~~~R~f~Gl~Dc~~Ki~ksDGi~glYr 177 (298)
T KOG0749|consen 124 AAGATSLCFVYPLDFARTRLAADVGK---GGTEREFKGLIDCLKKIAKSDGIAGLYR 177 (298)
T ss_pred ccCceeEEEEeccchhhHHHHhhcCC---CCCCCCcccHHHHHHHHHccccchhhhh
Confidence 44555566799999999999987642 1236789999999999999999999997
No 41
>KOG0770|consensus
Probab=99.06 E-value=4.6e-10 Score=65.35 Aligned_cols=60 Identities=22% Similarity=0.253 Sum_probs=45.6
Q ss_pred HHHHHHHHHHH----HhhccHHHHHHHHhhcccccch-hhhcccCCCHHHHHHHHHHhhcccccc
Q psy16572 5 NEILFGCLLLS----IGTFPIDTAKTRLQVQGQQLDQ-QYAKLKYRGMTDVLLQISRKDGFWALY 64 (65)
Q Consensus 5 ~~~~~ag~~~~----~~~~P~d~iktr~q~~~~~~~~-~~~~~~~~~~~~~~~~i~~~eG~~gly 64 (65)
+..++||++.. ++--|.||+|+|||.|....++ -.....|......++.|+|+||+++||
T Consensus 128 ~~hl~AGfvGD~~~SfvYVPsEVlKtRlQlQGR~nnP~fqsgynY~~~rga~k~i~KeeG~k~lf 192 (353)
T KOG0770|consen 128 WAHLIAGFVGDTLGSFVYVPSEVLKTRLQLQGRNNNPVFQSGYNYGYYRGAFKAIWKEEGPKGLF 192 (353)
T ss_pred HHHHHHHHHHhhhcceEEeeHHHHHHHHhHhcccCCCcccCCCchHHHHHHHHHHHHHhCcchhh
Confidence 44577776654 4455999999999999754332 234567888889999999999999987
No 42
>KOG0036|consensus
Probab=99.00 E-value=3.4e-10 Score=68.78 Aligned_cols=50 Identities=26% Similarity=0.369 Sum_probs=43.9
Q ss_pred HHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 8 LFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 8 ~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.+||+++.+..||.|++|+|+|..... .+.+++++.++++.+||+++|||
T Consensus 290 glAGavAQ~~IYPmd~lKtRlq~~~~~--------~~~~~l~~ak~il~~eg~r~Fyk 339 (463)
T KOG0036|consen 290 GLAGAVAQTSIYPMDTLKTRLQCRPLG--------QGKGLLKLAKDILFQEGPRAFYK 339 (463)
T ss_pred CchhHHHHhhcChHHHHHHHhhccccc--------chhhhhhhhhhHHHhhhHHHHHh
Confidence 467788899999999999999998764 44599999999999999999986
No 43
>KOG0755|consensus
Probab=98.99 E-value=9.2e-11 Score=67.46 Aligned_cols=51 Identities=33% Similarity=0.492 Sum_probs=42.2
Q ss_pred HHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 8 LFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 8 ~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
+++|...++...|+|+|-||+-.|.. +..|++..||+.+++|.||+-||||
T Consensus 236 ~isG~~vsvam~p~Dvv~TRlYNQ~~-------d~lYkg~iDC~lk~lRsEGv~~lYK 286 (320)
T KOG0755|consen 236 LISGSGVSVAMTPFDVVTTRLYNQKV-------DELYKGPIDCILKTLRSEGVYALYK 286 (320)
T ss_pred hhcccceEEEecchHHHHHHHHhccc-------chhhcCcHHHHHHHHHhhhHHHHHh
Confidence 34444444567899999999999876 3589999999999999999999986
No 44
>KOG0766|consensus
Probab=98.94 E-value=4.2e-10 Score=64.12 Aligned_cols=47 Identities=32% Similarity=0.442 Sum_probs=40.6
Q ss_pred HHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 8 LFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 8 ~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.++|.++++..+|+|++|||+|.... .+++..+++|+++|++.+|||
T Consensus 22 ~~gG~~St~~lQPLDLLKTR~Qq~qr-----------~~l~k~l~~iv~~~s~l~LWk 68 (297)
T KOG0766|consen 22 SIGGTCSTLLLQPLDLLKTRLQQLQR-----------VGLLKVLLKIVRTESLLGLWK 68 (297)
T ss_pred ccccchhhhhcCcHHHHHHHHHHHHH-----------hhHHHHHHHHHhccchHHhhc
Confidence 45567888899999999999997654 489999999999999999997
No 45
>KOG0770|consensus
Probab=98.94 E-value=1.3e-10 Score=67.50 Aligned_cols=50 Identities=28% Similarity=0.254 Sum_probs=42.5
Q ss_pred HHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccc-cccC
Q psy16572 9 FGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFW-ALYS 65 (65)
Q Consensus 9 ~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~-glyr 65 (65)
++|..+....+|+|++|||.|.+.. -.+|+++.+|.+.||-+||++ |||+
T Consensus 41 IgGa~gd~~MHslDTvKTRqQ~a~~-------~nky~~m~~~yrTiw~eeGv~~GlY~ 91 (353)
T KOG0770|consen 41 IGGAFGDGMMHSLDTVKTRQQSAII-------MNKYQSMLQMYRTIWVEEGVKRGLYR 91 (353)
T ss_pred cccccccccccchhHHHHHHhhhhH-------HHHHHHHHHHHHHHhhhhchhhhhhc
Confidence 4455666789999999999998865 247889999999999999987 9986
No 46
>KOG0763|consensus
Probab=98.92 E-value=1.7e-09 Score=61.67 Aligned_cols=58 Identities=17% Similarity=0.160 Sum_probs=44.5
Q ss_pred HHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 8 LFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 8 ~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.+|.+.+.++.+|-|+||.|+|.-.+...........+..|...+.|+|++|++|||+
T Consensus 120 SlAa~Faal~LCPTELvKCkLQa~rEMk~~~~~a~~~~Tpwsv~r~I~k~~G~rGFy~ 177 (301)
T KOG0763|consen 120 SLAAAFAALVLCPTELVKCKLQAMREMKNSGKIAKSINTPWSVTRYILKKDGPRGFYH 177 (301)
T ss_pred hHHHHHHHHHhCcHHHHHHHHHHHHHHHhcccchhccCChHHHHHHHHhccCcceeee
Confidence 3444566778899999999999977643322223356788999999999999999985
No 47
>KOG0763|consensus
Probab=98.88 E-value=6.7e-11 Score=67.30 Aligned_cols=45 Identities=36% Similarity=0.583 Sum_probs=39.6
Q ss_pred HHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 12 LLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 12 ~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.+.....+|+|++|++||.-+. .|+++.+|+.+.|+++|++|||+
T Consensus 27 ~A~Vy~gQPlDTvKVK~QTFP~---------lYrg~~dC~l~TY~~dGlRGlYa 71 (301)
T KOG0763|consen 27 TACVYTGQPLDTVKVKMQTFPD---------LYRGLTDCFLKTYRQDGLRGLYA 71 (301)
T ss_pred ceeeeeCCCcceeeeehccChH---------HHhhHHHHHHHHHHHhhhhhhhc
Confidence 3344567899999999998876 79999999999999999999995
No 48
>KOG0769|consensus
Probab=98.86 E-value=2.7e-09 Score=62.10 Aligned_cols=58 Identities=22% Similarity=0.223 Sum_probs=48.0
Q ss_pred HHHHHHHHHhhccHHHHHHHHhhcccccc-hhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 8 LFGCLLLSIGTFPIDTAKTRLQVQGQQLD-QQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 8 ~~ag~~~~~~~~P~d~iktr~q~~~~~~~-~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
++||.+..+++.|+|++-||||.+..... .......|++..|.++.+-.+||+.+||+
T Consensus 110 a~AGsinvl~T~Plwvv~TRmqt~~~~~~~~~a~~~~~k~l~d~~~~~~~d~GIs~lw~ 168 (308)
T KOG0769|consen 110 AAAGSINVLLTTPLWVVNTRMQTSEFAESDQDAVPKLYKTLTDGLWAVAFDEGISALWK 168 (308)
T ss_pred HHHhhhHHHhcChHHHHHHHHHHHhhccccccccccchhhHHHHHHHhccccchHHHhc
Confidence 67888899999999999999999865432 22235678999999999999999999985
No 49
>KOG0767|consensus
Probab=98.84 E-value=1.7e-09 Score=63.07 Aligned_cols=49 Identities=20% Similarity=0.327 Sum_probs=42.4
Q ss_pred HHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 8 LFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 8 ~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
+.|.+.+.+...|+|-+|+|+|.++. --+++.+++-+|+++||+.||||
T Consensus 143 AsAEf~ADiaLcP~EA~KVRvQT~P~---------fa~~l~~~~pki~k~EG~~~fyk 191 (333)
T KOG0767|consen 143 ASAEFFADIALCPMEAVKVRVQTQPG---------FANTLRDGFPKIYKEEGLGGFYK 191 (333)
T ss_pred hHHHHHHHHHhCchhhheEEEeccCc---------ccchhHHHHHHHHHHhhhhhHhc
Confidence 44556778889999999999999875 45789999999999999999986
No 50
>KOG2954|consensus
Probab=98.80 E-value=5.7e-09 Score=62.31 Aligned_cols=58 Identities=28% Similarity=0.452 Sum_probs=45.4
Q ss_pred HHHHHHHHHhhccHHHHHHHHhhcccccc--hh-------hhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 8 LFGCLLLSIGTFPIDTAKTRLQVQGQQLD--QQ-------YAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 8 ~~ag~~~~~~~~P~d~iktr~q~~~~~~~--~~-------~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
++|.++.-++.||+|+|--||+.|+...- +. .-..+|.|++||.+.++.+||+.||||
T Consensus 284 ~~aml~TdvilyPfETIlHRl~iQGTRTiIDNlDtGysvvpi~t~Y~G~fDC~rt~~~sEGv~glYk 350 (427)
T KOG2954|consen 284 LIAMLTTDVILYPFETILHRLYIQGTRTIIDNLDTGYSVVPILTKYSGYFDCYRTTLESEGVWGLYK 350 (427)
T ss_pred HHHHHhhhhhhccHHHHHHHHhccceeeeeeccCCcceeeEeeeccchHHHHHHHHHHhhhHHHHHh
Confidence 44555566788999999999999986421 10 113489999999999999999999996
No 51
>KOG0750|consensus
Probab=98.73 E-value=1.3e-09 Score=63.04 Aligned_cols=57 Identities=32% Similarity=0.408 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhc-----cccccC
Q psy16572 6 EILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDG-----FWALYS 65 (65)
Q Consensus 6 ~~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG-----~~glyr 65 (65)
+..+||++...+++|+|+||+|+|++.... .....|+++.+|..+.++-+| +.|+|+
T Consensus 14 ngg~aGiigvscvfPvDlvktRLqnq~~~~---~g~~~yn~~~dc~~~s~~~~~~~~~~f~Gmy~ 75 (304)
T KOG0750|consen 14 NGGIAGIIGVSCVFPIDLVKTRLQNQHGKI---TGKRQYNGVIDCDKKSARAGGKATSLFPGMYR 75 (304)
T ss_pred cCcceeeeeEEEEeeHHHhHHHHhhcccCc---ccccccchhhhhhhhhhhccCchhhhcccccc
Confidence 446777888889999999999999985421 235689999999999999998 888886
No 52
>KOG0756|consensus
Probab=98.53 E-value=1.3e-08 Score=59.70 Aligned_cols=48 Identities=21% Similarity=0.383 Sum_probs=38.1
Q ss_pred HHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 15 SIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 15 ~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.++..|+|.|||+++.+....+ ...+++++++++++|+|+||++|+||
T Consensus 123 v~~v~P~e~vKta~i~~~~~~~---~~~~~~g~~~~~~~IvkeeGi~gi~~ 170 (299)
T KOG0756|consen 123 VAVVTPMECVKTAFIQDKKSPS---PKYKQKGFIHVVRHIVKEEGIRGIYR 170 (299)
T ss_pred eEEeeceeeeeehhhhhccCCC---cccccccHHHHHHHHHHhcCcccccc
Confidence 3467899999999887755321 23345799999999999999999996
No 53
>KOG2745|consensus
Probab=98.29 E-value=3.2e-07 Score=53.74 Aligned_cols=52 Identities=17% Similarity=0.273 Sum_probs=44.3
Q ss_pred HHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhcccccc
Q psy16572 8 LFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALY 64 (65)
Q Consensus 8 ~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~gly 64 (65)
.+.-+++.++++||.+|-.|..+|-. +++.+|.+..+.+-+|+|+||+.|||
T Consensus 144 ~v~~~~~v~~ahPFhVi~~R~maQfV-----GrEtkYtg~~~Sl~~I~kqEG~~GfF 195 (321)
T KOG2745|consen 144 SVIRVVAVVAAHPFHVISLRQMAQFV-----GRETKYTGLVGSLATIGKQEGIAGFF 195 (321)
T ss_pred HHHHHHHHhhcCceeeeeHHHHHHHH-----cccchhhHHHHHHHHHHHhcchhhHH
Confidence 45556778899999999999988754 23668999999999999999999987
No 54
>KOG1519|consensus
Probab=98.27 E-value=1.6e-06 Score=49.17 Aligned_cols=43 Identities=26% Similarity=0.386 Sum_probs=34.1
Q ss_pred HHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhh--ccccccC
Q psy16572 15 SIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKD--GFWALYS 65 (65)
Q Consensus 15 ~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~e--G~~glyr 65 (65)
.++.+|+.+||+|||++-.. +|.+....+++||.+. .+.+||+
T Consensus 226 ~~~FFPi~VvKt~MQsqiG~--------efqS~~KVFqkiW~~RdRkL~~Lf~ 270 (297)
T KOG1519|consen 226 GFLFFPINVVKTRMQSQIGG--------EFQSFPKVFQKIWLERDRKLINLFR 270 (297)
T ss_pred HHhhccHHHHHHHHHHHhCc--------cccchHHHHHHHHHHhhHHHHHHHh
Confidence 45688999999999998653 7889999999999654 3555553
No 55
>KOG2745|consensus
Probab=97.52 E-value=0.00036 Score=41.31 Aligned_cols=59 Identities=24% Similarity=0.243 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhhccHHHHHHHHhhcccccchh-------hhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 7 ILFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQ-------YAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 7 ~~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
.++.+.--+.+.+|++.+|+-+|...++.++. ......++++.-.++|-+.+|..|+||
T Consensus 23 ~~~l~lg~saLs~Pl~y~K~LIQlGhEPlpp~~g~~I~gR~v~~LP~~fsYakhI~~idG~~gl~r 88 (321)
T KOG2745|consen 23 RFILRLGLSALSHPLEYVKTLIQLGHEPLPPTKGRNILGRPVLFLPNFFSYAKHIGTIDGYIGLYR 88 (321)
T ss_pred HHHHHhhHHHhhchHHHHHHHHHhCCCCCCCCccceecCccceeCccHHHHHHHHhcccccchhhh
Confidence 35556666778999999999999987654321 112245789999999999999999996
No 56
>KOG2954|consensus
Probab=88.97 E-value=0.27 Score=30.38 Aligned_cols=50 Identities=16% Similarity=0.223 Sum_probs=34.2
Q ss_pred HHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 13 LLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 13 ~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
...++.+|+-|+|.+.|+..... ...-.--....++.+..|+.|+..|||
T Consensus 79 TenllsHPc~VLRrQCQV~~~a~---~yHLtPftlip~i~~~~rrQGl~tlWK 128 (427)
T KOG2954|consen 79 TENLLSHPCGVLRRQCQVYNAAG---SYHLTPFTLIPVIVHLHRRQGLTTLWK 128 (427)
T ss_pred HHhhhcCchhhhhhHhhhhhhcc---ceeccceeeeehhhhhhhhccHHHHHh
Confidence 34678999999999999876420 000011245677888888889888886
No 57
>KOG1519|consensus
Probab=88.39 E-value=0.94 Score=26.25 Aligned_cols=45 Identities=29% Similarity=0.320 Sum_probs=22.6
Q ss_pred HHHHHHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccccC
Q psy16572 8 LFGCLLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWALYS 65 (65)
Q Consensus 8 ~~ag~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyr 65 (65)
++|+++...++ | +..|+-+|.+--. ..+.+.+.++ |.+|++.+||
T Consensus 38 ~~a~~~nv~i~-P-~~~kVLfrqqly~----------~kT~~aF~qL-R~~GfRn~YR 82 (297)
T KOG1519|consen 38 CCAAFNNVAIT-P-PIQKVLFRQQLYG----------IKTRDAFLQL-RRDGFRNLYR 82 (297)
T ss_pred HHHHhhhhhcC-h-HHHHHHHHHHHhc----------chHHHHHHHH-HHhhHHHHHh
Confidence 44444444444 4 4555555544221 2445555544 5667776665
No 58
>KOG1484|consensus
Probab=79.89 E-value=4.8 Score=25.04 Aligned_cols=39 Identities=26% Similarity=0.304 Sum_probs=28.0
Q ss_pred hhccH--HHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhccccc
Q psy16572 17 GTFPI--DTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWAL 63 (65)
Q Consensus 17 ~~~P~--d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~gl 63 (65)
.++|+ +..+.-+|..+.. .-+..-+|+++|-..+|+.++
T Consensus 254 sv~PL~k~s~~iLLq~tPp~--------~~~~l~~cl~~Is~~~gV~~v 294 (354)
T KOG1484|consen 254 SVLPLLKYSGKILLQRTPPH--------LENSLKQCLRQISTLDGVTSV 294 (354)
T ss_pred HHHHHHHHHHHHHHhcCChh--------hhhHHHHHHHHhhccccceee
Confidence 46787 6677788876542 334677899999999997653
No 59
>PRK12482 flagellar motor protein MotA; Provisional
Probab=76.16 E-value=3 Score=25.19 Aligned_cols=56 Identities=18% Similarity=0.182 Sum_probs=28.9
Q ss_pred HHHH-HHHHHhhccHHHHHHHHhhccccc-chhhhcccCCCH---HHHHHHHHHhhccccc
Q psy16572 8 LFGC-LLLSIGTFPIDTAKTRLQVQGQQL-DQQYAKLKYRGM---TDVLLQISRKDGFWAL 63 (65)
Q Consensus 8 ~~ag-~~~~~~~~P~d~iktr~q~~~~~~-~~~~~~~~~~~~---~~~~~~i~~~eG~~gl 63 (65)
.++| +.+.++.+|++.+|.-+..-...- .+......|... +-.+.+..|+||+.+|
T Consensus 37 V~GGt~ga~lis~p~~~~~~~~k~~~~~f~~~~~~~~~y~~~i~~lv~ls~~aRr~GllaL 97 (287)
T PRK12482 37 ILGAGIGAMILGNPKSVLKEMWHQIKGVIRRKEYGVEFQRQLLLLLYELLEMVQEGGLKRL 97 (287)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHHHHHHHHhcCHHHH
Confidence 4444 455678999999986554321100 000011112233 3445566788887664
No 60
>PRK09110 flagellar motor protein MotA; Validated
Probab=73.88 E-value=4.1 Score=24.51 Aligned_cols=56 Identities=25% Similarity=0.336 Sum_probs=28.4
Q ss_pred HHHH-HHHHHhhccHHHHHHHHhhcccccc-hhhhcccCCCHHHHHHH---HHHhhccccc
Q psy16572 8 LFGC-LLLSIGTFPIDTAKTRLQVQGQQLD-QQYAKLKYRGMTDVLLQ---ISRKDGFWAL 63 (65)
Q Consensus 8 ~~ag-~~~~~~~~P~d~iktr~q~~~~~~~-~~~~~~~~~~~~~~~~~---i~~~eG~~gl 63 (65)
.++| +.+.++.+|++.+|.-...-...-. +......|....+.+.+ ..|++|+.+|
T Consensus 37 V~Ggtlga~lv~~p~~~i~~~~k~~~~~f~~~~~~~~~~~~li~~l~~l~~~aRk~GllaL 97 (283)
T PRK09110 37 IGGAALGAFIVGNPGKAIKATLKALPKLFKGPKYKKADYMDLLALLYELLRKARQEGMMAL 97 (283)
T ss_pred HHHhHHHHHHHcCCHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHhcCHHHH
Confidence 3444 4456789999999976543221000 00011223334444433 6678887654
No 61
>PF00473 CRF: Corticotropin-releasing factor family; InterPro: IPR000187 Corticotropin-releasing factor (CRF), urotensin-I, urocortin and sauvagine form a family of related neuropeptides in vertebrates. The family can be grouped into 2 separate paralogous lineages, with urotensin-I, urocortin and sauvagine in one group and CRF forming the other group. Urocortin and sauvagine appear to represent orthologues of fish urotensin-I in mammals and amphibians, respectively. The peptides have a variety of physiological effects on stress and anxiety, vasoregulation, thermoregulation, growth and metabolism, metamorphosis and reproduction in various species, and are all released as preprohormones []. CRF [] is a hormone found mainly in the paraventricular nucleus of the mammalian hypothalamus that regulates the release of corticotropin (ACTH) from the pituitary gland. From here, CRF is transported to the anterior pituitary, stimulating adrenocorticotropic hormone (ACTH) release via CRF type 1 receptors, thereby activating the hypothalamo-pituitary-adrenocortical axis (HPA) and thus glucocorticoid release. CRF is evolutionary related to a number of other active peptides. Urocortin acts in vitro to stimulate the secretion of adrenocorticotropic hormone. Urotensin is found in the teleost caudal neurosecretory system and may play a role in osmoregulation and as a corticotropin-releasing factor. Urotensin-I is released from the urophysis of fish, and produces ACTH and subsequent cortisol release in vivo. The nonhormonal portion of the prohormone is thought to be the urotensin binding protein (urophysin). Sauvagine (P01144 from SWISSPROT), isolated from frog skin, has a potent hypotensive and diuretic effect.; GO: 0005179 hormone activity, 0005576 extracellular region; PDB: 3EHU_C 3EHT_B 2RMF_A 3N96_G.
Probab=64.45 E-value=6.4 Score=16.69 Aligned_cols=17 Identities=12% Similarity=0.229 Sum_probs=13.5
Q ss_pred HhhccHHHHHHHHhhcc
Q psy16572 16 IGTFPIDTAKTRLQVQG 32 (65)
Q Consensus 16 ~~~~P~d~iktr~q~~~ 32 (65)
.+..|+|+++.++....
T Consensus 5 SIdl~~~vLR~~l~~~~ 21 (39)
T PF00473_consen 5 SIDLTFHVLRQRLELER 21 (39)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHH
Confidence 46679999999987654
No 62
>PRK06926 flagellar motor protein MotP; Reviewed
Probab=60.69 E-value=8.4 Score=23.11 Aligned_cols=54 Identities=17% Similarity=0.146 Sum_probs=27.7
Q ss_pred HHHH-HHHHHhhccHHHHHHHHhhcccccchhhhcccCCCH---HHHHHHHHHhhccccc
Q psy16572 8 LFGC-LLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGM---TDVLLQISRKDGFWAL 63 (65)
Q Consensus 8 ~~ag-~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~---~~~~~~i~~~eG~~gl 63 (65)
.++| +.+.++.+|+..+|.-+..-...-. .....+... +--+-+..|++|+.+|
T Consensus 44 V~GGt~~a~lis~p~~~~~~~~k~l~~~f~--~~~~~~~~~i~~l~~la~~aRk~GlLaL 101 (271)
T PRK06926 44 VTGGLCAALFISFSPKDLKLAPRVLKQAFQ--SQEDDVEELVQTFVSLSEKARREGLLSL 101 (271)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHhcCHHHH
Confidence 4444 4567789999999874433211000 001122222 3334456678887654
No 63
>PF06043 Reo_P9: Reovirus P9-like family; InterPro: IPR009268 These proteins of unknown function are found in Rice black streaked dwarf virus (RBSDV) and other viruses.; PDB: 3VJJ_B.
Probab=59.91 E-value=27 Score=21.43 Aligned_cols=36 Identities=25% Similarity=0.407 Sum_probs=19.8
Q ss_pred HHHHHhhccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhcc
Q psy16572 12 LLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGF 60 (65)
Q Consensus 12 ~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~ 60 (65)
..+++--||+|.+|-.++..- ++...+.+.++++|+
T Consensus 237 ~latF~nypf~~lR~~L~s~i-------------s~p~~i~q~i~k~GL 272 (333)
T PF06043_consen 237 QLATFDNYPFDLLRFQLSSLI-------------SVPNSILQRIAKDGL 272 (333)
T ss_dssp HHHH-TT-BHHHHHHH-SS------------------HHHHHHHHHS-S
T ss_pred eeecCCCCcHHHHHHHhhhhc-------------CChHHHHHHHHhcCc
Confidence 356677899999987776542 344566777777774
No 64
>COG1963 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=58.61 E-value=14 Score=20.33 Aligned_cols=26 Identities=23% Similarity=0.156 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHhhccHHHHHHHHhh
Q psy16572 5 NEILFGCLLLSIGTFPIDTAKTRLQV 30 (65)
Q Consensus 5 ~~~~~ag~~~~~~~~P~d~iktr~q~ 30 (65)
.+..+|...+.++-.|++.+|+|--.
T Consensus 14 lsal~a~~~AQvIKv~I~~~~~rk~~ 39 (153)
T COG1963 14 LSALVAILLAQVIKVLIELIRTRKLN 39 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 45567777788888999999998543
No 65
>TIGR03818 MotA1 flagellar motor stator protein MotA. This model represents one family of MotA proteins which are often not identified by the "transporter, MotA/TolQ/ExbB proton channel family" model, pfam01618.
Probab=53.59 E-value=19 Score=21.73 Aligned_cols=56 Identities=23% Similarity=0.323 Sum_probs=27.6
Q ss_pred HHHH-HHHHHhhccHHHHHHHHhhccccc-chhhhcccCCCHHH---HHHHHHHhhccccc
Q psy16572 8 LFGC-LLLSIGTFPIDTAKTRLQVQGQQL-DQQYAKLKYRGMTD---VLLQISRKDGFWAL 63 (65)
Q Consensus 8 ~~ag-~~~~~~~~P~d~iktr~q~~~~~~-~~~~~~~~~~~~~~---~~~~i~~~eG~~gl 63 (65)
.++| +.+.++.+|++.+|.-...-...- .+..+...|....+ -+.+..|++|+.+|
T Consensus 37 V~Ggtlga~lis~p~~~~~~~~~~~~~~f~~~~~~~~~~~~li~~l~~la~~aR~~GllaL 97 (282)
T TIGR03818 37 IGGAAIGAFIIANPPKVLKETLKGLPKVFKGSKYGKADYLDLLSLLYELLRKARREGLMAI 97 (282)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHhcCHHHH
Confidence 3444 445678999999986543221100 00000112333333 34456678887654
No 66
>PF09882 DUF2109: Predicted membrane protein (DUF2109); InterPro: IPR019214 This entry is found in various hypothetical archaeal proteins and has no known function.
Probab=51.92 E-value=29 Score=17.00 Aligned_cols=23 Identities=9% Similarity=0.043 Sum_probs=18.4
Q ss_pred hHHHHHHHHHHHHhhccHHHHHH
Q psy16572 4 DNEILFGCLLLSIGTFPIDTAKT 26 (65)
Q Consensus 4 ~~~~~~ag~~~~~~~~P~d~ikt 26 (65)
..+++++|.++..+-+|+..+-.
T Consensus 32 v~~F~iaalIaL~i~~P~g~iaA 54 (78)
T PF09882_consen 32 VINFAIAALIALYIKSPMGAIAA 54 (78)
T ss_pred HHHHHHHHHHHHHhCCcHHHHHH
Confidence 35789999999999999876644
No 67
>KOG1746|consensus
Probab=50.91 E-value=36 Score=17.77 Aligned_cols=27 Identities=22% Similarity=0.405 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHhhccc
Q psy16572 6 EILFGCLLLSIGTFPIDTAKTRLQVQGQ 33 (65)
Q Consensus 6 ~~~~ag~~~~~~~~P~d~iktr~q~~~~ 33 (65)
|.+++|.++++-.. .-.+--|||..+.
T Consensus 56 NSFLSGfIscVg~f-VLavclR~q~n~q 82 (115)
T KOG1746|consen 56 NSFLSGFISCVGQF-VLAVCLRIQVNQQ 82 (115)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHhccc
Confidence 55778877764433 2346779998765
No 68
>PRK06743 flagellar motor protein MotP; Reviewed
Probab=50.43 E-value=16 Score=21.77 Aligned_cols=54 Identities=13% Similarity=0.092 Sum_probs=27.4
Q ss_pred HHHH-HHHHHhhccHHHHHHHHhhcccccchhhhcccCCCH---HHHHHHHHHhhccccc
Q psy16572 8 LFGC-LLLSIGTFPIDTAKTRLQVQGQQLDQQYAKLKYRGM---TDVLLQISRKDGFWAL 63 (65)
Q Consensus 8 ~~ag-~~~~~~~~P~d~iktr~q~~~~~~~~~~~~~~~~~~---~~~~~~i~~~eG~~gl 63 (65)
.++| +.+.++.+|++.++.-...-...-. .....|... +-.+-+..|++|+.+|
T Consensus 36 V~GGt~ga~li~~p~~~i~~~~k~~~~~f~--~~~~~~~~~i~~l~~la~~aRr~GlLaL 93 (254)
T PRK06743 36 VIGGTTATIVVAYRFGEIKKYTKSIFTVLH--RREEDLEQLTDLFVDFSKKSKKHGLLSL 93 (254)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHhcCHHHH
Confidence 4445 4556789999999865533221000 001122222 3334456677887654
No 69
>COG4297 Uncharacterized protein containing double-stranded beta helix domain [Function unknown]
Probab=50.03 E-value=11 Score=20.63 Aligned_cols=17 Identities=6% Similarity=0.270 Sum_probs=14.4
Q ss_pred HHHHHHHHhhccccccC
Q psy16572 49 DVLLQISRKDGFWALYS 65 (65)
Q Consensus 49 ~~~~~i~~~eG~~glyr 65 (65)
.-+..+++..||+|.|+
T Consensus 35 ~~~e~~~~~~gW~gsW~ 51 (163)
T COG4297 35 AQVEDHFKANGWFGSWR 51 (163)
T ss_pred HHHHHHHhhcCCccccc
Confidence 34788999999999986
No 70
>smart00039 CRF corticotropin-releasing factor.
Probab=49.47 E-value=14 Score=15.71 Aligned_cols=16 Identities=19% Similarity=0.341 Sum_probs=12.9
Q ss_pred hhccHHHHHHHHhhcc
Q psy16572 17 GTFPIDTAKTRLQVQG 32 (65)
Q Consensus 17 ~~~P~d~iktr~q~~~ 32 (65)
+..|+|+++.++....
T Consensus 7 Idl~~~vLR~~l~~e~ 22 (40)
T smart00039 7 IDLTFDLLRQRLELEK 22 (40)
T ss_pred cccHHHHHHHHHHHHH
Confidence 5679999999887654
No 71
>PF10295 DUF2406: Uncharacterised protein (DUF2406); InterPro: IPR018809 This entry represents a family of small proteins conserved in fungi. The function is not known.
Probab=41.20 E-value=16 Score=17.50 Aligned_cols=8 Identities=38% Similarity=0.742 Sum_probs=5.8
Q ss_pred ccHHHHHH
Q psy16572 19 FPIDTAKT 26 (65)
Q Consensus 19 ~P~d~ikt 26 (65)
-|||+||.
T Consensus 55 RPLDTIRs 62 (69)
T PF10295_consen 55 RPLDTIRS 62 (69)
T ss_pred CchHHHHH
Confidence 38888874
No 72
>PF13384 HTH_23: Homeodomain-like domain; PDB: 2X48_C.
Probab=40.50 E-value=12 Score=15.87 Aligned_cols=18 Identities=17% Similarity=0.219 Sum_probs=4.4
Q ss_pred CHHHHHHHHHHhhccccc
Q psy16572 46 GMTDVLLQISRKDGFWAL 63 (65)
Q Consensus 46 ~~~~~~~~i~~~eG~~gl 63 (65)
++..-+.+-|+++|+-||
T Consensus 32 ~Tv~~w~kr~~~~G~~gL 49 (50)
T PF13384_consen 32 STVYRWIKRYREEGLEGL 49 (50)
T ss_dssp HHHHHHHT----------
T ss_pred HHHHHHHHHccccccccc
Confidence 445556666777888776
No 73
>smart00263 LYZ1 Alpha-lactalbumin / lysozyme C.
Probab=40.46 E-value=20 Score=19.11 Aligned_cols=17 Identities=18% Similarity=0.081 Sum_probs=13.9
Q ss_pred HHHHHHHHHHhhccccc
Q psy16572 47 MTDVLLQISRKDGFWAL 63 (65)
Q Consensus 47 ~~~~~~~i~~~eG~~gl 63 (65)
-..|+++|++++|+.+.
T Consensus 91 dv~CAk~I~~~~G~~aW 107 (127)
T smart00263 91 DVKCAKKIVSDQGIDAW 107 (127)
T ss_pred HHHHHHHHHHHcCchHH
Confidence 36899999999998653
No 74
>KOG1431|consensus
Probab=39.77 E-value=16 Score=22.04 Aligned_cols=17 Identities=24% Similarity=0.511 Sum_probs=14.8
Q ss_pred hhccHHHHHHHHhhccc
Q psy16572 17 GTFPIDTAKTRLQVQGQ 33 (65)
Q Consensus 17 ~~~P~d~iktr~q~~~~ 33 (65)
.+||+|.++..+|.+..
T Consensus 73 ~~ynldF~r~Nl~indN 89 (315)
T KOG1431|consen 73 NTYNLDFIRKNLQINDN 89 (315)
T ss_pred CCCchHHHhhcceechh
Confidence 68999999999998763
No 75
>PF02109 DAD: DAD family; InterPro: IPR003038 Members of this family are thought to be integral membrane proteins. Some members of this family have been shown to cause apoptosis if mutated [], these proteins are known as DAD for defender against death. The family also includes the epsilon subunit of the oligosaccharyltransferase that is involved in N-linked glycosylation [].; GO: 0016021 integral to membrane
Probab=34.56 E-value=74 Score=16.69 Aligned_cols=27 Identities=19% Similarity=0.437 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHhhccc
Q psy16572 6 EILFGCLLLSIGTFPIDTAKTRLQVQGQ 33 (65)
Q Consensus 6 ~~~~ag~~~~~~~~P~d~iktr~q~~~~ 33 (65)
+.++||.++++-.. .=.+--|+|..+.
T Consensus 53 NaFLsGf~s~VG~f-VL~vsLR~Q~~p~ 79 (112)
T PF02109_consen 53 NAFLSGFISCVGQF-VLTVSLRIQLNPE 79 (112)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHhcccc
Confidence 56778877664433 2357789999854
No 76
>PF06837 Fijivirus_P9-2: Fijivirus P9-2 protein; InterPro: IPR009650 This family consists of several Fijivirus specific P9-2 proteins from Rice black streaked dwarf virus (RBSDV) and Fiji disease virus. The function of this family is unknown.
Probab=34.16 E-value=29 Score=20.03 Aligned_cols=14 Identities=21% Similarity=0.347 Sum_probs=12.2
Q ss_pred hhccHHHHHHHHhh
Q psy16572 17 GTFPIDTAKTRLQV 30 (65)
Q Consensus 17 ~~~P~d~iktr~q~ 30 (65)
.-.|+++.|+|+|+
T Consensus 14 f~cPf~laKiq~~~ 27 (214)
T PF06837_consen 14 FNCPFELAKIQIES 27 (214)
T ss_pred eccchHHHHHHHHh
Confidence 44699999999998
No 77
>PF08133 Nuclease_act: Anticodon nuclease activator family; InterPro: IPR012585 This family consists of the anticodon nuclease activator proteins. Pre-existing host tRNAs are reprocessed during Bacteriophage T4 infection of certain Escherichia coli strains. In this pathway, tRNA(Lys) is cleaved 5, by the anticodon nuclease to the wobble base and is later restored in polynucleotide kinase and RNA ligase reactions [].; GO: 0004518 nuclease activity, 0050792 regulation of viral reproduction
Probab=34.13 E-value=33 Score=12.97 Aligned_cols=17 Identities=6% Similarity=0.159 Sum_probs=11.2
Q ss_pred HHHHHHHHHHhhccccc
Q psy16572 47 MTDVLLQISRKDGFWAL 63 (65)
Q Consensus 47 ~~~~~~~i~~~eG~~gl 63 (65)
+.+..++-++..|+.|+
T Consensus 9 vmqfyr~nlk~~gvfg~ 25 (26)
T PF08133_consen 9 VMQFYRHNLKTKGVFGR 25 (26)
T ss_pred HHHHHHhhccccccccc
Confidence 45666677777777663
No 78
>PF13518 HTH_28: Helix-turn-helix domain
Probab=33.78 E-value=36 Score=14.24 Aligned_cols=20 Identities=20% Similarity=0.180 Sum_probs=14.7
Q ss_pred CCHHHHHHHHHHhhcccccc
Q psy16572 45 RGMTDVLLQISRKDGFWALY 64 (65)
Q Consensus 45 ~~~~~~~~~i~~~eG~~gly 64 (65)
.+...-+.+.++++|+.||.
T Consensus 26 ~~tv~~w~~~y~~~G~~~l~ 45 (52)
T PF13518_consen 26 RSTVYRWIKRYREGGIEGLK 45 (52)
T ss_pred HhHHHHHHHHHHhcCHHHhc
Confidence 35567778888888887764
No 79
>COG4075 Uncharacterized conserved protein, homolog of nitrogen regulatory protein PII [Function unknown]
Probab=33.71 E-value=26 Score=18.04 Aligned_cols=14 Identities=14% Similarity=0.387 Sum_probs=11.3
Q ss_pred HHHHHHhhcccccc
Q psy16572 51 LLQISRKDGFWALY 64 (65)
Q Consensus 51 ~~~i~~~eG~~gly 64 (65)
...++...|+.|||
T Consensus 19 aiN~mad~GiTGFf 32 (110)
T COG4075 19 AINIMADAGITGFF 32 (110)
T ss_pred HHHHHHhcCcceEE
Confidence 45678889999987
No 80
>PF10126 Nit_Regul_Hom: Uncharacterized protein, homolog of nitrogen regulatory protein PII; InterPro: IPR019296 This family consists of various hypothetical archaeal proteins. It includes a putative nitrogen regulatory protein PII homolog.
Probab=33.27 E-value=26 Score=18.28 Aligned_cols=14 Identities=14% Similarity=0.356 Sum_probs=10.8
Q ss_pred HHHHHHhhcccccc
Q psy16572 51 LLQISRKDGFWALY 64 (65)
Q Consensus 51 ~~~i~~~eG~~gly 64 (65)
.-.++.+.|+.|||
T Consensus 19 aINaLte~GITGFy 32 (110)
T PF10126_consen 19 AINALTEGGITGFY 32 (110)
T ss_pred HHHHHHhcCccEEE
Confidence 44577888999987
No 81
>PF06842 DUF1242: Protein of unknown function (DUF1242); InterPro: IPR009653 This family consists of a number of eukaryotic proteins of around 72 residues in length. The function of this family is unknown.
Probab=32.86 E-value=14 Score=15.40 Aligned_cols=8 Identities=38% Similarity=0.941 Sum_probs=5.0
Q ss_pred hhcccccc
Q psy16572 57 KDGFWALY 64 (65)
Q Consensus 57 ~eG~~gly 64 (65)
++|++|+|
T Consensus 28 k~G~~G~f 35 (36)
T PF06842_consen 28 KTGFRGVF 35 (36)
T ss_pred Cccccccc
Confidence 46777754
No 82
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=30.48 E-value=81 Score=15.89 Aligned_cols=28 Identities=25% Similarity=0.325 Sum_probs=18.2
Q ss_pred CCChHHHHHHHHHHHHhhccHHHHHHHH
Q psy16572 1 MLGDNEILFGCLLLSIGTFPIDTAKTRL 28 (65)
Q Consensus 1 ~~~~~~~~~ag~~~~~~~~P~d~iktr~ 28 (65)
|.+.+-++++-+++.++.-..|+.-.++
T Consensus 1 MaSK~~llL~l~LA~lLlisSevaa~~~ 28 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALLLISSEVAAREL 28 (95)
T ss_pred CchhHHHHHHHHHHHHHHHHhhhhhHHh
Confidence 6666777777777776655556655444
No 83
>PRK08990 flagellar motor protein PomA; Reviewed
Probab=29.56 E-value=83 Score=18.74 Aligned_cols=21 Identities=19% Similarity=0.368 Sum_probs=13.4
Q ss_pred HHHH-HHHHHhhccHHHHHHHH
Q psy16572 8 LFGC-LLLSIGTFPIDTAKTRL 28 (65)
Q Consensus 8 ~~ag-~~~~~~~~P~d~iktr~ 28 (65)
.++| +.+.++.+|+.-++.-+
T Consensus 38 V~GGt~ga~l~~~~~~~~~~~~ 59 (254)
T PRK08990 38 VFGGSLFVVLMKFNLGQFFGAV 59 (254)
T ss_pred HHHHHHHHHHhhccHHHHHHHH
Confidence 4444 44566789987777544
No 84
>COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase [General function prediction only]
Probab=29.34 E-value=1.2e+02 Score=19.94 Aligned_cols=28 Identities=14% Similarity=0.114 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHhhccHHHHHHHHhhccc
Q psy16572 6 EILFGCLLLSIGTFPIDTAKTRLQVQGQ 33 (65)
Q Consensus 6 ~~~~ag~~~~~~~~P~d~iktr~q~~~~ 33 (65)
+.+++-.+..-+..|+||++.-+-+-..
T Consensus 261 HSllS~alNigLL~PleVi~Aa~~Ay~~ 288 (505)
T COG3046 261 HSLLSFALNIGLLTPLEVIRAALKAYRE 288 (505)
T ss_pred HHHHHHHhhccCCCHHHHHHHHHHhhcc
Confidence 4466666777788999999998776544
No 85
>PF13467 RHH_4: Ribbon-helix-helix domain; PDB: 3KK4_C.
Probab=29.25 E-value=64 Score=15.25 Aligned_cols=16 Identities=25% Similarity=0.499 Sum_probs=12.4
Q ss_pred CCHHHHHHHHHHhhcc
Q psy16572 45 RGMTDVLLQISRKDGF 60 (65)
Q Consensus 45 ~~~~~~~~~i~~~eG~ 60 (65)
..+|+++.+|.+.+|.
T Consensus 20 ~~FW~~L~eiA~~~g~ 35 (67)
T PF13467_consen 20 PAFWDALEEIAAREGL 35 (67)
T ss_dssp HHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHHcCC
Confidence 3579999999988885
No 86
>PF12301 CD99L2: CD99 antigen like protein 2; InterPro: IPR022078 This family of proteins is found in eukaryotes. Proteins in this family are typically between 165 and 237 amino acids in length. CD99L2 and CD99 are involved in trans-endothelial migration of neutrophils in vitro and in the recruitment of neutrophils into inflamed peritoneum.
Probab=28.62 E-value=33 Score=19.25 Aligned_cols=20 Identities=0% Similarity=0.014 Sum_probs=8.5
Q ss_pred HHHHHHHHHhhccHHHHHHH
Q psy16572 8 LFGCLLLSIGTFPIDTAKTR 27 (65)
Q Consensus 8 ~~ag~~~~~~~~P~d~iktr 27 (65)
.+||+++++++.-+--|-..
T Consensus 116 ~IaGIvsav~valvGAvsSy 135 (169)
T PF12301_consen 116 TIAGIVSAVVVALVGAVSSY 135 (169)
T ss_pred hhhhHHHHHHHHHHHHHHHH
Confidence 34444444444433334333
No 87
>PRK09109 motC flagellar motor protein; Reviewed
Probab=27.60 E-value=69 Score=18.89 Aligned_cols=22 Identities=18% Similarity=0.224 Sum_probs=15.1
Q ss_pred HHHH-HHHHHhhccHHHHHHHHh
Q psy16572 8 LFGC-LLLSIGTFPIDTAKTRLQ 29 (65)
Q Consensus 8 ~~ag-~~~~~~~~P~d~iktr~q 29 (65)
.++| +.+.++.+|++.+|.-..
T Consensus 39 V~Ggt~~a~~i~~~~~~~~~~~~ 61 (246)
T PRK09109 39 VIGGTLGAVLLQTPLAVFKRAFK 61 (246)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHH
Confidence 3444 455778999999886543
No 88
>PF12590 Acyl-thio_N: Acyl-ATP thioesterase; InterPro: IPR021113 This entry represents the N-terminal domain of acyl-ATP thioesterases from bacteria and eukaryotes. These proteins are typically between 120 and 131 amino acids in length. The plant acyl-acyl carrier protein (ACP) thioesterases (TEs) play an essential role in chain termination during de novo fatty acid synthesis [].; GO: 0016790 thiolester hydrolase activity
Probab=27.39 E-value=77 Score=17.04 Aligned_cols=16 Identities=19% Similarity=0.173 Sum_probs=11.7
Q ss_pred CChHHHHHHHHHHHHh
Q psy16572 2 LGDNEILFGCLLLSIG 17 (65)
Q Consensus 2 ~~~~~~~~ag~~~~~~ 17 (65)
||++++++|.+...++
T Consensus 93 LPDWSMLLAAITTIFl 108 (129)
T PF12590_consen 93 LPDWSMLLAAITTIFL 108 (129)
T ss_pred CccHHHHHHHHHHHHH
Confidence 6889999988655443
No 89
>cd00119 LYZ1 C-type lysozyme (1, 4-beta-N-acetylmuramidase, LYZ) and alpha-lactalbumin (lactose synthase B protein, LA). They have a close evolutionary relationship and similar tertiary structure, however, functionally they are quite different. Lysozymes have primarily bacteriolytic function; hydrolysis of peptidoglycan of prokaryotic cell walls and transglycosylation. LA is a calcium-binding metalloprotein that is expressed exclusively in the mammary gland during lactation. LA is the regulatory subunit of the enzyme lactose synthase. The association of LA with the catalytic component of lactose synthase, galactosyltransferase, alters the acceptor substrate specificity of this glycosyltransferase, facilitating biosynthesis of lactose.
Probab=26.67 E-value=41 Score=17.87 Aligned_cols=17 Identities=24% Similarity=0.247 Sum_probs=13.5
Q ss_pred HHHHHHHHHHhh-ccccc
Q psy16572 47 MTDVLLQISRKD-GFWAL 63 (65)
Q Consensus 47 ~~~~~~~i~~~e-G~~gl 63 (65)
-..|.++|+++. |+.+.
T Consensus 88 ~i~CAk~I~~~~~G~~aW 105 (123)
T cd00119 88 DIKCAKKIVKEHQGFDAW 105 (123)
T ss_pred HHHHHHHHHhcCCCchhH
Confidence 478899999987 87653
No 90
>COG4043 Preprotein translocase subunit Sec61beta [Intracellular trafficking, secretion, and vesicular transport]
Probab=25.98 E-value=56 Score=16.98 Aligned_cols=17 Identities=12% Similarity=0.216 Sum_probs=13.3
Q ss_pred HHHHHHHHHHhhccccc
Q psy16572 47 MTDVLLQISRKDGFWAL 63 (65)
Q Consensus 47 ~~~~~~~i~~~eG~~gl 63 (65)
..+.|+.++++||+-.+
T Consensus 56 ~Y~tF~~mlreepiE~v 72 (111)
T COG4043 56 VYDTFEEMLREEPIENV 72 (111)
T ss_pred ehhHHHHHHHhcChhhh
Confidence 47889999999987544
No 91
>PF00440 TetR_N: Bacterial regulatory proteins, tetR family; InterPro: IPR001647 This entry represents a DNA-binding domain with a helix-turn-helix (HTH) structure that is found in several bacterial and archaeal transcriptional regulators, such as TetR, the tetracycline resistance repressor. Numerous other transcriptional regulatory proteins also contain HTH-type DNA-binding domains, and can be grouped into subfamiles based on sequence similarity. The domain represented by this entry is found in a subfamily of proteins that includes the transcriptional regulators TetR, TetC, AcrR, BetI, Bm3R1, EnvR, QacR, MtrR, TcmR, Ttk, YbiH, and YhgD [, , ]. Many of these proteins function as repressors that control the level of susceptibility to hydrophobic antibiotics and detergents. They all have similar molecular weights, ranging from 21 to 25 kDa. The helix-turn-helix motif is located in the initial third of the protein. The 3D structure of the homodimeric TetR protein complexed with 7-chloro-tetracycline-magnesium has been determined to 2.1 A resolution []. TetR folds into ten alpha-helices with connecting turns and loops. The three N-terminal alpha-helices of the repressor form the DNA-binding domain: this structural motif encompasses an HTH fold with an inverse orientation compared with that of other DNA-binding proteins.; GO: 0003677 DNA binding; PDB: 3NPI_B 3IUV_A 3CCY_A 2JK3_A 2FX0_A 2JJ7_A 2WV1_B 3BTI_D 3BR6_E 3BR5_A ....
Probab=25.12 E-value=69 Score=13.34 Aligned_cols=13 Identities=15% Similarity=0.407 Sum_probs=6.2
Q ss_pred HHHHHHHHhhccc
Q psy16572 49 DVLLQISRKDGFW 61 (65)
Q Consensus 49 ~~~~~i~~~eG~~ 61 (65)
+...+++.++|+.
T Consensus 3 ~aa~~l~~~~G~~ 15 (47)
T PF00440_consen 3 EAALELFAEKGYE 15 (47)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCHH
Confidence 3444455555544
No 92
>PF15033 Kinocilin: Kinocilin protein
Probab=24.98 E-value=54 Score=17.09 Aligned_cols=21 Identities=29% Similarity=0.401 Sum_probs=12.6
Q ss_pred HHHHHHHhhccHHHHHHHHhhcc
Q psy16572 10 GCLLLSIGTFPIDTAKTRLQVQG 32 (65)
Q Consensus 10 ag~~~~~~~~P~d~iktr~q~~~ 32 (65)
||.--.++.||+ +|.|++.+.
T Consensus 48 aglgll~~~yPf--l~arfnldh 68 (124)
T PF15033_consen 48 AGLGLLILAYPF--LKARFNLDH 68 (124)
T ss_pred hHHHHHHHhccc--chhhcCccc
Confidence 333334567887 788876653
No 93
>COG1993 PII-like signaling protein [Signal transduction mechanisms]
Probab=24.41 E-value=69 Score=16.76 Aligned_cols=18 Identities=11% Similarity=0.403 Sum_probs=14.7
Q ss_pred CCHHHHHHHHHHhhcccc
Q psy16572 45 RGMTDVLLQISRKDGFWA 62 (65)
Q Consensus 45 ~~~~~~~~~i~~~eG~~g 62 (65)
+.+...+.+.++++|++|
T Consensus 22 kp~~~~iverlre~Gi~G 39 (109)
T COG1993 22 KPLYEAIVERLREEGIRG 39 (109)
T ss_pred eEHHHHHHHHHHHcCcCc
Confidence 457888999999998776
No 94
>PF07037 DUF1323: Putative transcription regulator (DUF1323); InterPro: IPR010749 This family consists of several hypothetical Enterobacterial proteins of around 120 residues in length. The function of this family is unknown.
Probab=24.38 E-value=40 Score=17.96 Aligned_cols=14 Identities=14% Similarity=0.325 Sum_probs=9.3
Q ss_pred HHHHHHhhcccccc
Q psy16572 51 LLQISRKDGFWALY 64 (65)
Q Consensus 51 ~~~i~~~eG~~gly 64 (65)
+...+..||+.||.
T Consensus 101 L~~lL~REGI~G~L 114 (122)
T PF07037_consen 101 LTSLLLREGISGFL 114 (122)
T ss_pred HHHHHHHhhHHHHH
Confidence 34456678888873
No 95
>PF11784 DUF3320: Protein of unknown function (DUF3320); InterPro: IPR021754 This family is conserved in Proteobacteria and Chlorobi families. Many members are annotated as being putative DNA helicase-related proteins.
Probab=24.24 E-value=82 Score=13.85 Aligned_cols=14 Identities=21% Similarity=0.363 Sum_probs=10.8
Q ss_pred HHHHHHHHHHhhcc
Q psy16572 47 MTDVLLQISRKDGF 60 (65)
Q Consensus 47 ~~~~~~~i~~~eG~ 60 (65)
+.+.+.+|+..||+
T Consensus 13 L~~~i~~Iv~~EgP 26 (52)
T PF11784_consen 13 LARMIRQIVEVEGP 26 (52)
T ss_pred HHHHHHHHHHHcCC
Confidence 56778888888885
No 96
>PF15162 DUF4580: Domain of unknown function (DUF4580)
Probab=24.07 E-value=1.2e+02 Score=16.99 Aligned_cols=20 Identities=15% Similarity=0.139 Sum_probs=14.9
Q ss_pred HHHHhhcc-HHHHHHHHhhcc
Q psy16572 13 LLSIGTFP-IDTAKTRLQVQG 32 (65)
Q Consensus 13 ~~~~~~~P-~d~iktr~q~~~ 32 (65)
++....-| .|.|+-|||.-.
T Consensus 122 iAK~t~kP~~~~I~~Rm~~~k 142 (162)
T PF15162_consen 122 IAKTTSKPYCDVICYRMITAK 142 (162)
T ss_pred HHHHhcCCcHHHHHHHHHHHH
Confidence 34556778 899999998643
No 97
>COG5499 Predicted transcription regulator containing HTH domain [Transcription]
Probab=22.52 E-value=66 Score=16.97 Aligned_cols=14 Identities=21% Similarity=0.503 Sum_probs=11.8
Q ss_pred cHHHHHHHHhhccc
Q psy16572 20 PIDTAKTRLQVQGQ 33 (65)
Q Consensus 20 P~d~iktr~q~~~~ 33 (65)
|.++||+.|+.-+.
T Consensus 61 pve~I~t~Md~~gl 74 (120)
T COG5499 61 PVEVIRTLMDQYGL 74 (120)
T ss_pred HHHHHHHHHHHhCC
Confidence 79999999987654
No 98
>PF05415 Peptidase_C36: Beet necrotic yellow vein furovirus-type papain-like endopeptidase; InterPro: IPR008746 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases correspond to MEROPS peptidase family C36 (clan CA). The type example is beet necrotic yellow vein furovirus-type papain-like endopeptidase (beet necrotic yellow vein virus), which is involved in processing the viral polyprotein.
Probab=21.79 E-value=1.2e+02 Score=15.45 Aligned_cols=19 Identities=5% Similarity=-0.034 Sum_probs=14.4
Q ss_pred HHHhhccHHHHHHHHhhcc
Q psy16572 14 LSIGTFPIDTAKTRLQVQG 32 (65)
Q Consensus 14 ~~~~~~P~d~iktr~q~~~ 32 (65)
+-.+...+|.++..||.+.
T Consensus 15 s~~L~~T~e~l~~~M~An~ 33 (104)
T PF05415_consen 15 SECLGVTLEKLDNLMQANV 33 (104)
T ss_pred HHHhcchHHHHHHHHHhhH
Confidence 3345567899999999873
No 99
>PRK00944 hypothetical protein; Provisional
Probab=21.61 E-value=63 Score=18.60 Aligned_cols=12 Identities=17% Similarity=0.459 Sum_probs=9.2
Q ss_pred HhhccHHHHHHH
Q psy16572 16 IGTFPIDTAKTR 27 (65)
Q Consensus 16 ~~~~P~d~iktr 27 (65)
++.+|+|.||.=
T Consensus 180 MLv~P~eAik~W 191 (195)
T PRK00944 180 MLVWPVEAIKQW 191 (195)
T ss_pred hhhccHHHHHHH
Confidence 357899999863
No 100
>PF04217 DUF412: Protein of unknown function, DUF412; InterPro: IPR007334 This family consists of bacterial uncharacterised proteins.
Probab=21.47 E-value=1e+02 Score=16.97 Aligned_cols=36 Identities=22% Similarity=0.409 Sum_probs=21.2
Q ss_pred HHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHh
Q psy16572 22 DTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRK 57 (65)
Q Consensus 22 d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 57 (65)
.-|+.+++.++....+....+.|....+.+++..++
T Consensus 100 ~ei~~Kl~~~g~~~~~~~~~P~Y~dLA~lL~~Af~~ 135 (143)
T PF04217_consen 100 HEIRQKLQEQGIALQPVKSKPRYQDLAELLKRAFKQ 135 (143)
T ss_pred HHHHHHHHHcCCccCCCCCCCCHHHHHHHHHHHHHH
Confidence 346667776654333334456677777777766654
No 101
>PF14307 Glyco_tran_WbsX: Glycosyltransferase WbsX
Probab=21.36 E-value=82 Score=19.38 Aligned_cols=22 Identities=14% Similarity=0.329 Sum_probs=17.7
Q ss_pred cCCCHHHHHHHHHHhhcccccc
Q psy16572 43 KYRGMTDVLLQISRKDGFWALY 64 (65)
Q Consensus 43 ~~~~~~~~~~~i~~~eG~~gly 64 (65)
..+.+++.+++..++.|+.|+|
T Consensus 172 d~~~~~~~wr~~a~~~G~~giy 193 (345)
T PF14307_consen 172 DIKEMIERWREEAKEAGLPGIY 193 (345)
T ss_pred CHHHHHHHHHHHHHHcCCCceE
Confidence 3456788899999999998876
No 102
>KOG2623|consensus
Probab=21.06 E-value=1.1e+02 Score=19.99 Aligned_cols=13 Identities=31% Similarity=0.442 Sum_probs=10.3
Q ss_pred HHHHHHHHhhccc
Q psy16572 21 IDTAKTRLQVQGQ 33 (65)
Q Consensus 21 ~d~iktr~q~~~~ 33 (65)
-|.|++|+|+...
T Consensus 191 r~SV~~RLes~~G 203 (467)
T KOG2623|consen 191 RDSVKSRLESPNG 203 (467)
T ss_pred HHHHHHhhcCCCC
Confidence 4889999998654
No 103
>PF12156 ATPase-cat_bd: Putative metal-binding domain of cation transport ATPase; InterPro: IPR021993 This domain is found in bacteria, and is approximately 90 amino acids in length. It is found associated with PF00403 from PFAM, PF00122 from PFAM, PF00702 from PFAM. The cysteine-rich nature and composition suggest this might be a cation-binding domain; most members are annotated as being cation transport ATPases.
Probab=20.99 E-value=54 Score=16.13 Aligned_cols=18 Identities=17% Similarity=0.435 Sum_probs=13.4
Q ss_pred HHHHHHHHHhhccccccC
Q psy16572 48 TDVLLQISRKDGFWALYS 65 (65)
Q Consensus 48 ~~~~~~i~~~eG~~glyr 65 (65)
-..+.+++..+|+..+|+
T Consensus 32 C~~V~~~i~~~gL~~yY~ 49 (88)
T PF12156_consen 32 CQAVYQLIHENGLESYYQ 49 (88)
T ss_pred HHHHHHHHHHcchHHHHh
Confidence 455677888888888874
No 104
>PRK05973 replicative DNA helicase; Provisional
Probab=20.75 E-value=1.9e+02 Score=17.09 Aligned_cols=37 Identities=19% Similarity=0.327 Sum_probs=22.0
Q ss_pred hccHHHHHHHHhhcccccchhhhcccCCCHHHHHHHHHHhhcccc
Q psy16572 18 TFPIDTAKTRLQVQGQQLDQQYAKLKYRGMTDVLLQISRKDGFWA 62 (65)
Q Consensus 18 ~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~g 62 (65)
+.|+..+|.+-..-.. ..-...-.++-++-++||+.+
T Consensus 4 ~~~~~~~~~~a~~~~~--------~~~~~~~~~~~~~a~~~g~~~ 40 (237)
T PRK05973 4 SAPIYHLKRKAKLLSR--------AQNIPLHEALDRIAAEEGFSS 40 (237)
T ss_pred chHHHHHHHHHHHHHH--------hcCCcHHHHHHHHHHHhccch
Confidence 4566666665432221 123456777888888888764
No 105
>PF00062 Lys: C-type lysozyme/alpha-lactalbumin family; InterPro: IPR001916 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 22 GH22 from CAZY comprises enzymes with two known activities; lysozyme type C (3.2.1.17 from EC) and alpha-lactalbumins. Asp and/or the carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base. Alpha-lactalbumin [, ] is a milk protein that acts as the regulatory subunit of lactose synthetase, acting to promote the conversion of galactosyltransferase to lactose synthase, which is essential for milk production. In the mammary gland, alpha-lactalbumin changes the substrate specificity of galactosyltransferase from N-acetylglucosamine to glucose. Lysozymes (3.2.1.17 from EC) act as bacteriolytic enzymes by hydrolyzing the beta(1->4) bonds between N-acetylglucosamine and N-acetylmuramic acid in the peptidoglycan of prokaryotic cell walls. It has also been recruited for a digestive role in certain ruminants and colobine monkeys []. There are at least five different classes of lysozymes []: C (chicken type), G (goose type), phage-type (T4), fungi (Chalaropsis), and bacterial (Bacillus subtilis). There are few similarities in the sequences of the different types of lysozymes. Lysozyme type C and alpha-lactalbumin are similar both in terms of primary sequence and structure, and probably evolved from a common ancestral protein []. Around 35 to 40% of the residues are conserved in both proteins as well as the positions of the four disulphide bonds. There is, however, no similarity in function. Another significant difference between the two enzymes is that all lactalbumins have the ability to bind calcium [], while this property is restricted to only a few lysozymes []. The binding site was deduced using high resolution X-ray structure analysis and was shown to consist of three aspartic acid residues. It was first suggested that calcium bound to lactalbumin stabilised the structure, but recently it has been claimed that calcium controls the release of lactalbumin from the golgi membrane and that the pattern of ion binding may also affect the catalytic properties of the lactose synthetase complex.; PDB: 1HFX_A 1HMK_A 1HFY_B 1FKQ_A 1FKV_A 3B0K_B 1HML_A 1B9O_A 1A4V_A 3B0O_A ....
Probab=20.53 E-value=1e+02 Score=16.40 Aligned_cols=18 Identities=22% Similarity=0.167 Sum_probs=13.9
Q ss_pred CHHHHHHHHH-Hhhccccc
Q psy16572 46 GMTDVLLQIS-RKDGFWAL 63 (65)
Q Consensus 46 ~~~~~~~~i~-~~eG~~gl 63 (65)
.-..|+++|+ ..+|+...
T Consensus 90 ddi~Cak~I~~~~~G~~aW 108 (125)
T PF00062_consen 90 DDIRCAKKIYREPQGFNAW 108 (125)
T ss_dssp HHHHHHHHHHTHHTGGGGS
T ss_pred HHHHHHHHHHcCcccchhh
Confidence 4578999999 78888653
No 106
>PF08528 Whi5: Whi5 like; InterPro: IPR013734 This is a short conserved sequence found in the Nrm1/Whi5 transcription factors. Nrm1 is a negative regulatory component of the MBF complex involved in cell-cycle-dependent transcription []. Whi5 is a transcriptional repressor that negatively regulates G1-specific, SBF- and MBF-dependent transcription [, ].
Probab=20.12 E-value=67 Score=12.15 Aligned_cols=8 Identities=50% Similarity=0.708 Sum_probs=5.2
Q ss_pred HHHHHhhc
Q psy16572 24 AKTRLQVQ 31 (65)
Q Consensus 24 iktr~q~~ 31 (65)
+|+|+|.-
T Consensus 2 Lr~RL~lA 9 (25)
T PF08528_consen 2 LRTRLQLA 9 (25)
T ss_pred HHHHHhHh
Confidence 47777754
Done!