BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16574
(152 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|389608533|dbj|BAM17876.1| similar to CG3800 [Papilio xuthus]
Length = 144
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 87/155 (56%), Gaps = 19/155 (12%)
Query: 5 STIQCYNCFDFGHYQYSCPQK--SSADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
S+ CY C GH+ C Q +S D ++ C+KCN GHFAR+C E+ CY C
Sbjct: 2 SSSVCYKCNRTGHFARECTQGGVASRDTGFNRQREKCFKCNRTGHFARDCKEEADRCYRC 61
Query: 63 SGQGHVAKDCT-VKSSIICYNCNSSGHFARNCP----NDSSKRCYACHQAGHMAKECPGQ 117
+G GH+A++C CYNCN +GH ARNCP + S + CY C++AGH+++ CP
Sbjct: 62 NGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDSSGQTCYTCNKAGHISRNCP-- 119
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
D + TCYVCG GH+S DC +++
Sbjct: 120 ----------DGTKTCYVCGKPGHISRDCDESERN 144
>gi|389610781|dbj|BAM19001.1| simila to CG3800 [Papilio polytes]
Length = 145
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 87/156 (55%), Gaps = 20/156 (12%)
Query: 5 STIQCYNCFDFGHYQYSCPQK---SSADARGDKVGIVCYKCNNYGHFARECATESVTCYN 61
S+ CY C GH+ C Q +S D ++ C+KCN GHFAR+C E+ CY
Sbjct: 2 SSSVCYKCNRTGHFARECTQGGGVASRDTGFNRQREKCFKCNRTGHFARDCKEEADRCYR 61
Query: 62 CSGQGHVAKDCT-VKSSIICYNCNSSGHFARNCP----NDSSKRCYACHQAGHMAKECPG 116
C+G GH+A++C CYNCN +GH ARNCP + S + CY C++AGH+++ CP
Sbjct: 62 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDSSGQTCYTCNKAGHISRNCP- 120
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
D + TCYVCG GH+S DC +++
Sbjct: 121 -----------DGTKTCYVCGKPGHISRDCDESERN 145
>gi|383858694|ref|XP_003704834.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Megachile
rotundata]
Length = 155
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 89/160 (55%), Gaps = 28/160 (17%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGD-----KVGIV-----CYKCNNYGHFARECA 53
S+ CY C GHY CPQ S ARGD + G V CYKCN YGHFAREC
Sbjct: 1 MSSSACYKCNRMGHYARECPQGSGGGARGDRGRDREGGFVRGRDKCYKCNQYGHFARECK 60
Query: 54 TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP---NDSSK----RCYACHQ 106
+ CY CSG GH+AKDC + CYNCN +GH AR+CP NDS + CY C++
Sbjct: 61 EDQDLCYRCSGVGHIAKDCQQGPEMSCYNCNKTGHIARSCPEGGNDSGRFAMQSCYNCNK 120
Query: 107 AGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GH+A+ C + GK TCY+CG GH+S +C
Sbjct: 121 TGHIARNCT-EAGGK----------TCYMCGKPGHISREC 149
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 47/111 (42%), Gaps = 19/111 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVG-----------IVCYKCNNYGHFARECATES 56
+CY C +GH+ C + R VG + CY CN GH AR C
Sbjct: 45 KCYKCNQYGHFARECKEDQDLCYRCSGVGHIAKDCQQGPEMSCYNCNKTGHIARSCPEGG 104
Query: 57 --------VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK 99
+CYNC+ GH+A++CT CY C GH +R C D K
Sbjct: 105 NDSGRFAMQSCYNCNKTGHIARNCTEAGGKTCYMCGKPGHISRECDQDDRK 155
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 37/91 (40%), Gaps = 31/91 (34%)
Query: 76 SSIICYNCNSSGHFARNCPN-------------------DSSKRCYACHQAGHMAKECPG 116
SS CY CN GH+AR CP +CY C+Q GH A+EC
Sbjct: 2 SSSACYKCNRMGHYARECPQGSGGGARGDRGRDREGGFVRGRDKCYKCNQYGHFARECK- 60
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
D L CY C GH++ DC+
Sbjct: 61 ----------EDQDL-CYRCSGVGHIAKDCQ 80
>gi|357619173|gb|EHJ71850.1| zinc finger protein [Danaus plexippus]
Length = 144
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 87/155 (56%), Gaps = 19/155 (12%)
Query: 5 STIQCYNCFDFGHYQYSCPQKS--SADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
S+ CY C GH+ C Q + DA ++ C+KCN GHFAR+C E+ CY C
Sbjct: 2 SSSVCYKCNRKGHFARECTQSGVGALDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRC 61
Query: 63 SGQGHVAKDCT-VKSSIICYNCNSSGHFARNCP----NDSSKRCYACHQAGHMAKECPGQ 117
+G GH+A++C CYNCN +GH ARNCP ++S++ CY C++ GH+++ CP
Sbjct: 62 NGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCNKTGHISRNCP-- 119
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
D + TCYVCG GH+S DC ++
Sbjct: 120 ----------DGTKTCYVCGKPGHISRDCDEADRN 144
>gi|289743447|gb|ADD20471.1| E3 ubiquitin ligase interacting with arginine methyltransferase
[Glossina morsitans morsitans]
Length = 150
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 81/158 (51%), Gaps = 25/158 (15%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSC-----PQKSSADARGDKVGIVCYKCNNYGHFARECATE 55
MS ST CY C GH+ C D R C+KCN YGHFAR C E
Sbjct: 1 MSMAST--CYKCNRTGHFARDCNFGGGGGGGGRDMRRGNNREKCFKCNQYGHFARACPEE 58
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR------CYACHQAGH 109
S CY C+G GH++KDCT + CY C+ GH+ARNCP S+ R CY C++ GH
Sbjct: 59 SERCYRCNGVGHISKDCTQPDNPTCYKCHKVGHWARNCPEASNDRSSSNISCYKCNRTGH 118
Query: 110 MAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
++K CP D + TCY CG GHL +C+
Sbjct: 119 ISKNCP------------DTAKTCYGCGKSGHLRRECE 144
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 19/110 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIV-----------CYKCNNYGHFAREC---- 52
+C+ C +GH+ +CP++S R + VG + CYKC+ GH+AR C
Sbjct: 41 KCFKCNQYGHFARACPEESERCYRCNGVGHISKDCTQPDNPTCYKCHKVGHWARNCPEAS 100
Query: 53 ---ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK 99
++ +++CY C+ GH++K+C ++ CY C SGH R C S+
Sbjct: 101 NDRSSSNISCYKCNRTGHISKNCP-DTAKTCYGCGKSGHLRRECEEKGSR 149
>gi|121543757|gb|ABM55551.1| zinc finger protein-like protein [Maconellicoccus hirsutus]
Length = 142
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 82/147 (55%), Gaps = 23/147 (15%)
Query: 9 CYNCFDFGHYQYSCPQ-KSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGH 67
CY C + GH+ CP + R +K CYKCN +GHFAR+C + CY C+ GH
Sbjct: 7 CYRCRETGHFARECPSFEPGKPIRREK----CYKCNAFGHFARDCKEDQDRCYRCNEIGH 62
Query: 68 VAKDCTV-KSSIICYNCNSSGHFARNCPNDSSK-------RCYACHQAGHMAKECPGQTA 119
+A+DC SS CY+C GH AR+CP+ SS CY C++AGHMA++CP
Sbjct: 63 IARDCVRSDSSPQCYSCKGIGHIARDCPDSSSNNSRHFSANCYNCNKAGHMARDCPNSGG 122
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GK TCYVC QGH+S DC
Sbjct: 123 GK----------TCYVCRKQGHISRDC 139
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 64/118 (54%), Gaps = 20/118 (16%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQ 65
+CY C FGH+ C + CY+CN GH AR+C + S CY+C G
Sbjct: 33 KCYKCNAFGHFARDCKEDQDR----------CYRCNEIGHIARDCVRSDSSPQCYSCKGI 82
Query: 66 GHVAKDCTVKSS-------IICYNCNSSGHFARNCPNDSS-KRCYACHQAGHMAKECP 115
GH+A+DC SS CYNCN +GH AR+CPN K CY C + GH++++CP
Sbjct: 83 GHIARDCPDSSSNNSRHFSANCYNCNKAGHMARDCPNSGGGKTCYVCRKQGHISRDCP 140
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE--SVT 58
+ S S+ QCY+C GH CP SS ++R CY CN GH AR+C T
Sbjct: 68 VRSDSSPQCYSCKGIGHIARDCPDSSSNNSR--HFSANCYNCNKAGHMARDCPNSGGGKT 125
Query: 59 CYNCSGQGHVAKDC 72
CY C QGH+++DC
Sbjct: 126 CYVCRKQGHISRDC 139
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 18/74 (24%)
Query: 79 ICYNCNSSGHFARNCPN------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLT 132
+CY C +GHFAR CP+ ++CY C+ GH A++C +
Sbjct: 6 MCYRCRETGHFARECPSFEPGKPIRREKCYKCNAFGHFARDC------------KEDQDR 53
Query: 133 CYVCGHQGHLSYDC 146
CY C GH++ DC
Sbjct: 54 CYRCNEIGHIARDC 67
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Query: 101 CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
CY C + GH A+ECP GK P+ CY C GH + DCK Q
Sbjct: 7 CYRCRETGHFARECPSFEPGK---PI--RREKCYKCNAFGHFARDCKEDQ 51
>gi|110759374|ref|XP_001119951.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis
mellifera]
gi|328780974|ref|XP_003249895.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis
mellifera]
gi|328780976|ref|XP_003249896.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis
mellifera]
gi|328780978|ref|XP_003249897.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis
mellifera]
gi|380028029|ref|XP_003697714.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis florea]
gi|380028031|ref|XP_003697715.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis florea]
gi|380028033|ref|XP_003697716.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis florea]
gi|380028035|ref|XP_003697717.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis florea]
gi|380028037|ref|XP_003697718.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Apis florea]
Length = 155
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 83/163 (50%), Gaps = 36/163 (22%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSAD-------------ARG-DKVGIVCYKCNNYGHFAR 50
S+ CY C GHY CPQ ARG DK CYKCN +GHFAR
Sbjct: 2 SSSACYKCNRMGHYARECPQGGGGGGRGDRGRDREGGFARGRDK----CYKCNQFGHFAR 57
Query: 51 ECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP---NDSSK----RCYA 103
EC + CY C G GH+AKDC + CYNCN +GH AR+CP NDS + CY
Sbjct: 58 ECKEDQDLCYRCQGVGHIAKDCQQGPEMSCYNCNKTGHMARSCPEGGNDSGRFGMQSCYN 117
Query: 104 CHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C++ GH A+ C + GK+ CY CG GHLS +C
Sbjct: 118 CNKTGHFARNCT-EVGGKA----------CYTCGKTGHLSREC 149
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 47/111 (42%), Gaps = 19/111 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVG-----------IVCYKCNNYGHFARECATES 56
+CY C FGH+ C + R VG + CY CN GH AR C
Sbjct: 45 KCYKCNQFGHFARECKEDQDLCYRCQGVGHIAKDCQQGPEMSCYNCNKTGHMARSCPEGG 104
Query: 57 --------VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK 99
+CYNC+ GH A++CT CY C +GH +R C D K
Sbjct: 105 NDSGRFGMQSCYNCNKTGHFARNCTEVGGKACYTCGKTGHLSRECDQDDRK 155
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 37/91 (40%), Gaps = 31/91 (34%)
Query: 76 SSIICYNCNSSGHFARNCPN-------------------DSSKRCYACHQAGHMAKECPG 116
SS CY CN GH+AR CP +CY C+Q GH A+EC
Sbjct: 2 SSSACYKCNRMGHYARECPQGGGGGGRGDRGRDREGGFARGRDKCYKCNQFGHFARECK- 60
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
D L CY C GH++ DC+
Sbjct: 61 ----------EDQDL-CYRCQGVGHIAKDCQ 80
>gi|156536895|ref|XP_001607266.1| PREDICTED: CCHC-type zinc finger protein CG3800-like isoform 2
[Nasonia vitripennis]
gi|156536897|ref|XP_001607260.1| PREDICTED: CCHC-type zinc finger protein CG3800-like isoform 1
[Nasonia vitripennis]
gi|345479376|ref|XP_003423939.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Nasonia
vitripennis]
Length = 155
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 84/159 (52%), Gaps = 28/159 (17%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIV----------CYKCNNYGHFARECAT 54
S+ CY C GH+ CPQ + RG C+KCN YGHFAREC
Sbjct: 2 SSSACYKCNRMGHFARECPQGGATGGRGGDRRDRDGGFGRGREKCFKCNQYGHFARECKE 61
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP---NDSSK----RCYACHQA 107
+ CY C+G GH+AKDC + CYNCN +GH AR+CP NDS + CY C++
Sbjct: 62 DQDLCYRCNGVGHIAKDCQQGPEMSCYNCNKTGHMARSCPESGNDSGRFNMQSCYTCNKT 121
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GH+A+ CP + GK TCY+C GH+S +C
Sbjct: 122 GHIARNCP-EGGGK----------TCYICHKTGHISREC 149
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 19/111 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVG-----------IVCYKCNNYGHFARECATES 56
+C+ C +GH+ C + R + VG + CY CN GH AR C
Sbjct: 45 KCFKCNQYGHFARECKEDQDLCYRCNGVGHIAKDCQQGPEMSCYNCNKTGHMARSCPESG 104
Query: 57 --------VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK 99
+CY C+ GH+A++C CY C+ +GH +R C D K
Sbjct: 105 NDSGRFNMQSCYTCNKTGHIARNCPEGGGKTCYICHKTGHISRECDQDDRK 155
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 31/91 (34%)
Query: 76 SSIICYNCNSSGHFARNCPNDSS-------------------KRCYACHQAGHMAKECPG 116
SS CY CN GHFAR CP + ++C+ C+Q GH A+EC
Sbjct: 2 SSSACYKCNRMGHFARECPQGGATGGRGGDRRDRDGGFGRGREKCFKCNQYGHFARECK- 60
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
D L CY C GH++ DC+
Sbjct: 61 ----------EDQDL-CYRCNGVGHIAKDCQ 80
>gi|340719027|ref|XP_003397959.1| PREDICTED: CCHC-type zinc finger protein CG3800-like isoform 1
[Bombus terrestris]
gi|340719029|ref|XP_003397960.1| PREDICTED: CCHC-type zinc finger protein CG3800-like isoform 2
[Bombus terrestris]
gi|350399027|ref|XP_003485390.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Bombus
impatiens]
Length = 155
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 83/164 (50%), Gaps = 36/164 (21%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSAD-------------ARG-DKVGIVCYKCNNYGHFA 49
S+ CY C GHY CPQ ARG DK CYKCN +GHFA
Sbjct: 1 MSSSACYKCNRMGHYARECPQGGGGGGRGDRGRDREGGFARGRDK----CYKCNQFGHFA 56
Query: 50 RECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP---NDSSK----RCY 102
REC + CY C G GH+AKDC + CYNCN +GH AR+CP NDS + CY
Sbjct: 57 RECKEDQDLCYRCQGVGHIAKDCQQGPEMSCYNCNKTGHMARSCPEGGNDSGRFGMQSCY 116
Query: 103 ACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C++ GH A+ C + GK+ CY CG GHLS +C
Sbjct: 117 NCNKTGHFARNCT-EVGGKA----------CYTCGKPGHLSREC 149
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 46/111 (41%), Gaps = 19/111 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVG-----------IVCYKCNNYGHFARECATES 56
+CY C FGH+ C + R VG + CY CN GH AR C
Sbjct: 45 KCYKCNQFGHFARECKEDQDLCYRCQGVGHIAKDCQQGPEMSCYNCNKTGHMARSCPEGG 104
Query: 57 --------VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK 99
+CYNC+ GH A++CT CY C GH +R C D K
Sbjct: 105 NDSGRFGMQSCYNCNKTGHFARNCTEVGGKACYTCGKPGHLSRECDQDDRK 155
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 37/91 (40%), Gaps = 31/91 (34%)
Query: 76 SSIICYNCNSSGHFARNCPN-------------------DSSKRCYACHQAGHMAKECPG 116
SS CY CN GH+AR CP +CY C+Q GH A+EC
Sbjct: 2 SSSACYKCNRMGHYARECPQGGGGGGRGDRGRDREGGFARGRDKCYKCNQFGHFARECK- 60
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
D L CY C GH++ DC+
Sbjct: 61 ----------EDQDL-CYRCQGVGHIAKDCQ 80
>gi|112982721|ref|NP_001037117.1| zinc finger protein [Bombyx mori]
gi|59858992|gb|AAX09282.1| zinc finger protein [Bombyx mori]
Length = 143
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 85/153 (55%), Gaps = 19/153 (12%)
Query: 5 STIQCYNCFDFGHYQYSCPQKS--SADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
S+ CY C GH+ C Q S D+ ++ C+KCN GHFAR+C E+ CY C
Sbjct: 2 SSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRC 61
Query: 63 SGQGHVAKDCT-VKSSIICYNCNSSGHFARNCP----NDSSKRCYACHQAGHMAKECPGQ 117
+G GH+A++C CYNCN +GH ARNCP +++ CY C+++GH+++ CP
Sbjct: 62 NGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCP-- 119
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
D + TCYVCG GH+S +C +
Sbjct: 120 ----------DGTKTCYVCGKPGHISRECDEAR 142
>gi|307198051|gb|EFN79104.1| Cellular nucleic acid-binding protein [Harpegnathos saltator]
Length = 154
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 85/158 (53%), Gaps = 27/158 (17%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIV---------CYKCNNYGHFARECATE 55
S+ CY C GH+ CPQ RGD+ C+KCN +GHFAREC +
Sbjct: 2 SSSACYKCNRMGHFARECPQGGGGGGRGDRGRDRDGFGRGREKCFKCNQFGHFARECKED 61
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP---NDSSK----RCYACHQAG 108
CY C+G GH+AKDC + CYNCN +GH AR+CP NDS + CY C++ G
Sbjct: 62 QDLCYRCNGVGHIAKDCQQGPELSCYNCNKTGHMARSCPEGGNDSGRFAMQSCYNCNKTG 121
Query: 109 HMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
H+A+ C + GK TCY+CG GH+S +C
Sbjct: 122 HIARNCT-EAGGK----------TCYICGKTGHISREC 148
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 19/111 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVG-----------IVCYKCNNYGHFARECATES 56
+C+ C FGH+ C + R + VG + CY CN GH AR C
Sbjct: 44 KCFKCNQFGHFARECKEDQDLCYRCNGVGHIAKDCQQGPELSCYNCNKTGHMARSCPEGG 103
Query: 57 --------VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK 99
+CYNC+ GH+A++CT CY C +GH +R C D K
Sbjct: 104 NDSGRFAMQSCYNCNKTGHIARNCTEAGGKTCYICGKTGHISRECDQDDRK 154
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 38/90 (42%), Gaps = 30/90 (33%)
Query: 76 SSIICYNCNSSGHFARNCPNDSS------------------KRCYACHQAGHMAKECPGQ 117
SS CY CN GHFAR CP ++C+ C+Q GH A+EC
Sbjct: 2 SSSACYKCNRMGHFARECPQGGGGGGRGDRGRDRDGFGRGREKCFKCNQFGHFARECK-- 59
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
D L CY C GH++ DC+
Sbjct: 60 ---------EDQDL-CYRCNGVGHIAKDCQ 79
>gi|307183595|gb|EFN70327.1| Cellular nucleic acid-binding protein [Camponotus floridanus]
Length = 154
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 81/158 (51%), Gaps = 27/158 (17%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIV---------CYKCNNYGHFARECATE 55
S+ CY C GH+ CPQ C+KCN +GHFAREC +
Sbjct: 2 SSSACYKCNRMGHFARECPQGGGGGRGDRGRDRDGGFGRGREKCFKCNQFGHFARECKED 61
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP---NDSSK----RCYACHQAG 108
CY C+G GH+AKDC + CYNCN +GH AR+CP NDS + CY C++ G
Sbjct: 62 QDLCYRCNGVGHIAKDCQQGPELSCYNCNKTGHMARSCPEGGNDSGRFAMQSCYNCNKTG 121
Query: 109 HMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
H+A+ C + GK TCY+CG GH+S +C
Sbjct: 122 HIARNCT-EAGGK----------TCYICGKTGHISREC 148
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 19/111 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVG-----------IVCYKCNNYGHFARECATES 56
+C+ C FGH+ C + R + VG + CY CN GH AR C
Sbjct: 44 KCFKCNQFGHFARECKEDQDLCYRCNGVGHIAKDCQQGPELSCYNCNKTGHMARSCPEGG 103
Query: 57 --------VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK 99
+CYNC+ GH+A++CT CY C +GH +R C D K
Sbjct: 104 NDSGRFAMQSCYNCNKTGHIARNCTEAGGKTCYICGKTGHISRECDQDDRK 154
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 38/90 (42%), Gaps = 30/90 (33%)
Query: 76 SSIICYNCNSSGHFARNCPNDSS------------------KRCYACHQAGHMAKECPGQ 117
SS CY CN GHFAR CP ++C+ C+Q GH A+EC
Sbjct: 2 SSSACYKCNRMGHFARECPQGGGGGRGDRGRDRDGGFGRGREKCFKCNQFGHFARECK-- 59
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
D L CY C GH++ DC+
Sbjct: 60 ---------EDQDL-CYRCNGVGHIAKDCQ 79
>gi|263173451|gb|ACY69944.1| E3 ubiquitin ligase [Cimex lectularius]
Length = 143
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 75/144 (52%), Gaps = 18/144 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CY C GHY CPQ + G + CYKCN +GHFAR+C + CY C+G GH+
Sbjct: 6 CYRCNRSGHYARDCPQSGDRERGGFRSKEKCYKCNRFGHFARDCKEDQDRCYRCNGVGHI 65
Query: 69 AKDCTVK-SSIICYNCNSSGHFARNCPNDSSKR-----CYACHQAGHMAKECPGQTAGKS 122
A++C CY CN +GH AR+CP CY C++ GH+A++CP
Sbjct: 66 ARECQQNPDEPSCYTCNKTGHMARDCPEQRENSRGGGACYTCNKQGHVARDCP------- 118
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDC 146
+ +CY CG GH+S +C
Sbjct: 119 -----ESVRSCYSCGKAGHISREC 137
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 65/123 (52%), Gaps = 18/123 (14%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT--ESVTCYNC 62
S +CY C FGH+ C + CY+CN GH AREC + +CY C
Sbjct: 32 SKEKCYKCNRFGHFARDCKEDQD----------RCYRCNGVGHIARECQQNPDEPSCYTC 81
Query: 63 SGQGHVAKDC-----TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
+ GH+A+DC + CY CN GH AR+CP +S + CY+C +AGH+++EC
Sbjct: 82 NKTGHMARDCPEQRENSRGGGACYTCNKQGHVARDCP-ESVRSCYSCGKAGHISRECNKN 140
Query: 118 TAG 120
+ G
Sbjct: 141 STG 143
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 20/100 (20%)
Query: 56 SVTCYNCSGQGHVAKDCT---------VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQ 106
S +CY C+ GH A+DC +S CY CN GHFAR+C D RCY C+
Sbjct: 3 SGSCYRCNRSGHYARDCPQSGDRERGGFRSKEKCYKCNRFGHFARDCKEDQD-RCYRCNG 61
Query: 107 AGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GH+A+EC ++P+ +CY C GH++ DC
Sbjct: 62 VGHIARECQ-----QNPD-----EPSCYTCNKTGHMARDC 91
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 21/81 (25%)
Query: 76 SSIICYNCNSSGHFARNCPND---------SSKRCYACHQAGHMAKECPGQTAGKSPEPV 126
+S CY CN SGH+AR+CP S ++CY C++ GH A++C
Sbjct: 2 NSGSCYRCNRSGHYARDCPQSGDRERGGFRSKEKCYKCNRFGHFARDCK----------- 50
Query: 127 VDMSLTCYVCGHQGHLSYDCK 147
+ CY C GH++ +C+
Sbjct: 51 -EDQDRCYRCNGVGHIARECQ 70
>gi|147835847|emb|CAN70803.1| hypothetical protein VITISV_044067 [Vitis vinifera]
Length = 1850
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 52/153 (33%), Positives = 72/153 (47%), Gaps = 25/153 (16%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT----- 58
T+ C+NC + GH +CP + +C+ C GH AR+C+ V
Sbjct: 1616 TTRSLCWNCQEPGHTASNCPNEG-----------ICHTCGKTGHLARDCSAPPVPPGDLR 1664
Query: 59 -CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
C NC QGH+A DCT + C NC +GH AR+C ND C C+ +GH+A++CP
Sbjct: 1665 LCNNCYKQGHIAADCTNDKA--CNNCRKTGHLARDCRNDPV--CNLCNVSGHVARQCPKA 1720
Query: 118 TA----GKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G P + C C GH+S DC
Sbjct: 1721 NVLGDRGGGPRSSGFRDIVCRNCQQLGHMSRDC 1753
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 21/106 (19%)
Query: 47 HFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC-----PNDSSKRC 101
H A EC T S+ C+NC GH A +C + IC+ C +GH AR+C P + C
Sbjct: 1610 HIASECTTRSL-CWNCQEPGHTASNCPNEG--ICHTCGKTGHLARDCSAPPVPPGDLRLC 1666
Query: 102 YACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
C++ GH+A +C A C C GHL+ DC+
Sbjct: 1667 NNCYKQGHIAADCTNDKA-------------CNNCRKTGHLARDCR 1699
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 12/73 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVG---------IVCYKCNNYGHFARECATESVTC 59
C C GH CP+ A+ GD+ G IVC C GH +R+CA + C
Sbjct: 1704 CNLCNVSGHVARQCPK---ANVLGDRGGGPRSSGFRDIVCRNCQQLGHMSRDCAAPLMIC 1760
Query: 60 YNCSGQGHVAKDC 72
NC G+GH+A +C
Sbjct: 1761 RNCGGRGHMAFEC 1773
>gi|24658883|ref|NP_611739.1| CG3800, isoform A [Drosophila melanogaster]
gi|320544295|ref|NP_001188992.1| CG3800, isoform B [Drosophila melanogaster]
gi|74866354|sp|Q8T8R1.1|Y3800_DROME RecName: Full=CCHC-type zinc finger protein CG3800
gi|18447272|gb|AAL68216.1| GM14667p [Drosophila melanogaster]
gi|21428610|gb|AAM49965.1| LD48005p [Drosophila melanogaster]
gi|23240122|gb|AAN16117.1| CG3800, isoform A [Drosophila melanogaster]
gi|220944564|gb|ACL84825.1| CG3800-PA [synthetic construct]
gi|220954442|gb|ACL89764.1| CG3800-PA [synthetic construct]
gi|318068677|gb|ADV37238.1| CG3800, isoform B [Drosophila melanogaster]
Length = 165
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 67/114 (58%), Gaps = 18/114 (15%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
CYKCN +GHFAR C E+ CY C+G GH++KDCT + CY CN +GH+ RNCP +
Sbjct: 57 CYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQADNPTCYRCNKTGHWVRNCPEAVN 116
Query: 99 KR------CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+R CY C++ GH++K CP + S TCY CG GHL +C
Sbjct: 117 ERGPTNVSCYKCNRTGHISKNCP------------ETSKTCYGCGKSGHLRREC 158
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CY C GH+ +CP+ + + RG + CYKCN GH ++ C S TCY C GH+
Sbjct: 98 CYRCNKTGHWVRNCPE--AVNERGP-TNVSCYKCNRTGHISKNCPETSKTCYGCGKSGHL 154
Query: 69 AKDCTVK 75
++C K
Sbjct: 155 RRECDEK 161
>gi|125811606|ref|XP_001361942.1| GA17695 [Drosophila pseudoobscura pseudoobscura]
gi|54637118|gb|EAL26521.1| GA17695 [Drosophila pseudoobscura pseudoobscura]
Length = 159
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 67/114 (58%), Gaps = 18/114 (15%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
CYKCN +GHFAR C E+ CY C+G GH++KDCT + CY CN +GH+ RNCP +
Sbjct: 51 CYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQADNPTCYRCNKTGHWVRNCPEAVN 110
Query: 99 KR------CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+R CY C++ GH++K CP + S TCY CG GHL +C
Sbjct: 111 ERGPANVSCYKCNRTGHISKNCP------------ETSKTCYGCGKSGHLRREC 152
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CY C GH+ +CP+ + + RG + CYKCN GH ++ C S TCY C GH+
Sbjct: 92 CYRCNKTGHWVRNCPE--AVNERGP-ANVSCYKCNRTGHISKNCPETSKTCYGCGKSGHL 148
Query: 69 AKDCTVK 75
++C K
Sbjct: 149 RRECDEK 155
>gi|213521422|gb|ACJ50597.1| zinc finger protein [Lutzomyia shannoni]
Length = 150
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 87/160 (54%), Gaps = 31/160 (19%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVG---------IVCYKCNNYGHFARE 51
MSST+ CY C GH+ C + DK+G CYKCN GHFARE
Sbjct: 1 MSSTT---CYKCNRPGHFARECT--AGVGGPRDKMGGGSNYGRNREKCYKCNQTGHFARE 55
Query: 52 CATESVTCYNCSGQGHVAKDCTVKS-SIICYNCNSSGHFARNCP----NDSSKRCYACHQ 106
C E+ CY C+G GH+A++C+ + CYNCN +GH AR+CP N S CY C++
Sbjct: 56 CKEEADRCYRCNGTGHIARECSQSADDPSCYNCNKTGHLARHCPEQIDNRQSMSCYNCNK 115
Query: 107 AGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+GH+++ CP GKS CY+CG GH+S +C
Sbjct: 116 SGHISRHCP--EGGKS----------CYICGKLGHISREC 143
>gi|332021507|gb|EGI61872.1| CCHC-type zinc finger protein [Acromyrmex echinatior]
Length = 143
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 76/148 (51%), Gaps = 27/148 (18%)
Query: 15 FGHYQYSCPQKSSADARGDKVGIV---------CYKCNNYGHFARECATESVTCYNCSGQ 65
GH+ CPQ C+KCN +GHFAREC + CY C+G
Sbjct: 1 MGHFARECPQGGGGGRGDRGRDRDGGFGRGREKCFKCNQFGHFARECKEDQDLCYRCNGV 60
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNCP---NDSSK----RCYACHQAGHMAKECPGQT 118
GH+AKDC + CYNCN +GH AR+CP NDS + CY C++ GH+A+ C +
Sbjct: 61 GHIAKDCQQGPELSCYNCNKTGHMARSCPEGGNDSGRFAMQSCYNCNKTGHIARNCT-EA 119
Query: 119 AGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GK TCY+CG GH+S +C
Sbjct: 120 GGK----------TCYICGKTGHISREC 137
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 19/111 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVG-----------IVCYKCNNYGHFARECATES 56
+C+ C FGH+ C + R + VG + CY CN GH AR C
Sbjct: 33 KCFKCNQFGHFARECKEDQDLCYRCNGVGHIAKDCQQGPELSCYNCNKTGHMARSCPEGG 92
Query: 57 --------VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK 99
+CYNC+ GH+A++CT CY C +GH +R C D K
Sbjct: 93 NDSGRFAMQSCYNCNKTGHIARNCTEAGGKTCYICGKTGHISRECDQDDRK 143
>gi|345479378|ref|XP_003423940.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Nasonia
vitripennis]
Length = 162
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 84/166 (50%), Gaps = 35/166 (21%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIV----------CYKCNNYGHFARECAT 54
S+ CY C GH+ CPQ + RG C+KCN YGHFAREC
Sbjct: 2 SSSACYKCNRMGHFARECPQGGATGGRGGDRRDRDGGFGRGREKCFKCNQYGHFARECKE 61
Query: 55 ESVTCYNCSGQGHVAKDCT-------VKSSIICYNCNSSGHFARNCP---NDSSK----R 100
+ CY C+G GH+AKDC + CYNCN +GH AR+CP NDS +
Sbjct: 62 DQDLCYRCNGVGHIAKDCQQFQYTGYQGPEMSCYNCNKTGHMARSCPESGNDSGRFNMQS 121
Query: 101 CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C++ GH+A+ CP + GK TCY+C GH+S +C
Sbjct: 122 CYTCNKTGHIARNCP-EGGGK----------TCYICHKTGHISREC 156
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES--------VTCY 60
CY C GH C Q +G + + CY CN GH AR C +CY
Sbjct: 66 CYRCNGVGHIAKDCQQFQYTGYQGPE--MSCYNCNKTGHMARSCPESGNDSGRFNMQSCY 123
Query: 61 NCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK 99
C+ GH+A++C CY C+ +GH +R C D K
Sbjct: 124 TCNKTGHIARNCPEGGGKTCYICHKTGHISRECDQDDRK 162
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 31/94 (32%)
Query: 76 SSIICYNCNSSGHFARNCPNDSS-------------------KRCYACHQAGHMAKECPG 116
SS CY CN GHFAR CP + ++C+ C+Q GH A+EC
Sbjct: 2 SSSACYKCNRMGHFARECPQGGATGGRGGDRRDRDGGFGRGREKCFKCNQYGHFARECK- 60
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
D L CY C GH++ DC+ Q
Sbjct: 61 ----------EDQDL-CYRCNGVGHIAKDCQQFQ 83
>gi|255710197|gb|ACU30918.1| E3 ubiquitin ligase methyltransferase [Ochlerotatus triseriatus]
Length = 136
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 68/113 (60%), Gaps = 17/113 (15%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVK-SSIICYNCNSSGHFARNCPNDS 97
CYKCN GHFAR+C + CY C+G GH+A+DC++ CYNCN SGH ARNCP S
Sbjct: 29 CYKCNQMGHFARDCKEDLDRCYRCNGSGHIARDCSLSPDDSCCYNCNQSGHLARNCPEKS 88
Query: 98 SKR----CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY C+++GH+++ CP T KS CY CG GHLS DC
Sbjct: 89 DRDMNVSCYNCNKSGHISRNCP--TGDKS----------CYSCGKIGHLSRDC 129
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 13/97 (13%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC---PNDSSKRCYACHQAGHMAKECP 115
CY C+ GH A+DC + CY CN SGH AR+C P+DS CY C+Q+GH+A+ CP
Sbjct: 29 CYKCNQMGHFARDCK-EDLDRCYRCNGSGHIARDCSLSPDDSC--CYNCNQSGHLARNCP 85
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
++ DM+++CY C GH+S +C KS
Sbjct: 86 EKSD-------RDMNVSCYNCNKSGHISRNCPTGDKS 115
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH +CP+KS D + + CY CN GH +R C T +CY+C GH+
Sbjct: 71 CYNCNQSGHLARNCPEKSDRD-----MNVSCYNCNKSGHISRNCPTGDKSCYSCGKIGHL 125
Query: 69 AKDCT 73
++DCT
Sbjct: 126 SRDCT 130
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 18/109 (16%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIV------------CYKCNNYGHFARECATE 55
+CY C GH+ C + R + G + CY CN GH AR C +
Sbjct: 28 KCYKCNQMGHFARDCKEDLDRCYRCNGSGHIARDCSLSPDDSCCYNCNQSGHLARNCPEK 87
Query: 56 S-----VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK 99
S V+CYNC+ GH++++C CY+C GH +R+C + +
Sbjct: 88 SDRDMNVSCYNCNKSGHISRNCPT-GDKSCYSCGKIGHLSRDCTENKGR 135
>gi|242017353|ref|XP_002429154.1| cellular nucleic acid binding protein, putative [Pediculus humanus
corporis]
gi|212514027|gb|EEB16416.1| cellular nucleic acid binding protein, putative [Pediculus humanus
corporis]
Length = 131
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 71/121 (58%), Gaps = 11/121 (9%)
Query: 5 STIQCYNCFDFGHYQYSCPQKS-SADARGDKVGIV---------CYKCNNYGHFARECAT 54
ST CY C GH+ CPQ +RG++ G C+KCN YGHFAREC
Sbjct: 2 STGLCYKCHQSGHFARLCPQGGGDRSSRGNRDGGNFGRGGGRDKCFKCNRYGHFARECIE 61
Query: 55 ESVTCYNCSGQGHVAKDCTVKSS-IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKE 113
E CY+C+ GH+A+DC SS CYNCN +GH ARNCP S K CY+C + GH+++
Sbjct: 62 EKDRCYHCNAVGHIARDCPQPSSEPSCYNCNKTGHIARNCPEGSLKSCYSCGKTGHISRH 121
Query: 114 C 114
C
Sbjct: 122 C 122
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 53/123 (43%), Gaps = 19/123 (15%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
+CYKC+ GHFAR C + G C+ CN GHFAR C +
Sbjct: 5 LCYKCHQSGHFARLCPQGGGD-RSSRGNRDGGNFGRGGGRDKCFKCNRYGHFARECIEEK 63
Query: 98 SKRCYACHQAGHMAKECP--------------GQTAGKSPEPVVDMSLTCYVCGHQGHLS 143
RCY C+ GH+A++CP G A PE + +CY CG GH+S
Sbjct: 64 D-RCYHCNAVGHIARDCPQPSSEPSCYNCNKTGHIARNCPEGSLK---SCYSCGKTGHIS 119
Query: 144 YDC 146
C
Sbjct: 120 RHC 122
>gi|403183422|gb|EJY58088.1| AAEL017419-PA [Aedes aegypti]
Length = 157
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 68/113 (60%), Gaps = 17/113 (15%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVK-SSIICYNCNSSGHFARNCPNDS 97
CYKCN GHFAR+C + CY C+G GH+A+DC++ CYNCN SGH ARNCP S
Sbjct: 50 CYKCNQMGHFARDCKEDLDRCYRCNGSGHIARDCSLSPDDSCCYNCNQSGHLARNCPEKS 109
Query: 98 SKR----CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY C+++GH+++ CP T KS CY CG GHLS DC
Sbjct: 110 DRDMNVSCYNCNKSGHISRNCP--TGDKS----------CYSCGKIGHLSRDC 150
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 70/144 (48%), Gaps = 37/144 (25%)
Query: 36 GIVCYKCNNYGHFARECAT------------------------ESVTCYNCSGQGHVAKD 71
G C+KC+ GH+AR+C CY C+ GH A+D
Sbjct: 3 GNTCFKCDRPGHYARDCQNVGGGGGGGRPGGPRDRQFGGGGGGRREKCYKCNQMGHFARD 62
Query: 72 CTVKSSIICYNCNSSGHFARNC---PNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVD 128
C + CY CN SGH AR+C P+DS CY C+Q+GH+A+ CP ++ D
Sbjct: 63 CK-EDLDRCYRCNGSGHIARDCSLSPDDSC--CYNCNQSGHLARNCPEKSD-------RD 112
Query: 129 MSLTCYVCGHQGHLSYDCKLVQKS 152
M+++CY C GH+S +C KS
Sbjct: 113 MNVSCYNCNKSGHISRNCPTGDKS 136
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH +CP+KS D + + CY CN GH +R C T +CY+C GH+
Sbjct: 92 CYNCNQSGHLARNCPEKSDRD-----MNVSCYNCNKSGHISRNCPTGDKSCYSCGKIGHL 146
Query: 69 AKDCT 73
++DCT
Sbjct: 147 SRDCT 151
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 18/109 (16%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIV------------CYKCNNYGHFARECATE 55
+CY C GH+ C + R + G + CY CN GH AR C +
Sbjct: 49 KCYKCNQMGHFARDCKEDLDRCYRCNGSGHIARDCSLSPDDSCCYNCNQSGHLARNCPEK 108
Query: 56 S-----VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK 99
S V+CYNC+ GH++++C CY+C GH +R+C + +
Sbjct: 109 SDRDMNVSCYNCNKSGHISRNCPT-GDKSCYSCGKIGHLSRDCTENKGR 156
>gi|158297099|ref|XP_317381.3| AGAP008075-PA [Anopheles gambiae str. PEST]
gi|157015032|gb|EAA12317.4| AGAP008075-PA [Anopheles gambiae str. PEST]
Length = 153
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 77/156 (49%), Gaps = 26/156 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIV---------CYKCNNYGHFARECATE 55
ST C+ C GHY C RG CYKCN GHFAR+C +
Sbjct: 3 STNTCFKCDRPGHYARDCQNVGGGGGRGVGGPRDRRDFGRREKCYKCNQMGHFARDCKED 62
Query: 56 SVTCYNCSGQGHVAKDCTVK-SSIICYNCNSSGHFARNCPNDSSKR----CYACHQAGHM 110
CY C+G GH+A+DC++ CYNCN SGH ARNCP S + CY C+++GH+
Sbjct: 63 LDRCYRCNGSGHIARDCSLSPDDSCCYNCNQSGHLARNCPEKSDRDMNVSCYNCNKSGHI 122
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++ CP +CY CG GHLS DC
Sbjct: 123 SRNCPSGDK------------SCYSCGKIGHLSRDC 146
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 69/137 (50%), Gaps = 32/137 (23%)
Query: 38 VCYKCNNYGHFARECAT-------------------ESVTCYNCSGQGHVAKDCTVKSSI 78
C+KC+ GH+AR+C CY C+ GH A+DC +
Sbjct: 6 TCFKCDRPGHYARDCQNVGGGGGRGVGGPRDRRDFGRREKCYKCNQMGHFARDCK-EDLD 64
Query: 79 ICYNCNSSGHFARNC---PNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
CY CN SGH AR+C P+DS CY C+Q+GH+A+ CP ++ DM+++CY
Sbjct: 65 RCYRCNGSGHIARDCSLSPDDSC--CYNCNQSGHLARNCPEKSD-------RDMNVSCYN 115
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+S +C KS
Sbjct: 116 CNKSGHISRNCPSGDKS 132
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH +CP+KS D + + CY CN GH +R C + +CY+C GH+
Sbjct: 88 CYNCNQSGHLARNCPEKSDRD-----MNVSCYNCNKSGHISRNCPSGDKSCYSCGKIGHL 142
Query: 69 AKDCT 73
++DCT
Sbjct: 143 SRDCT 147
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 18/109 (16%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIV------------CYKCNNYGHFARECATE 55
+CY C GH+ C + R + G + CY CN GH AR C +
Sbjct: 45 KCYKCNQMGHFARDCKEDLDRCYRCNGSGHIARDCSLSPDDSCCYNCNQSGHLARNCPEK 104
Query: 56 S-----VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK 99
S V+CYNC+ GH++++C CY+C GH +R+C + +
Sbjct: 105 SDRDMNVSCYNCNKSGHISRNCP-SGDKSCYSCGKIGHLSRDCTENKGR 152
>gi|300122852|emb|CBK23859.2| unnamed protein product [Blastocystis hominis]
Length = 158
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 85/166 (51%), Gaps = 36/166 (21%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES-----VTCYN 61
++CY C + GH CP + +++ ++ + CY C +GH +R+C +ES TCYN
Sbjct: 1 MECYVCGEKGHKARDCPNRENSN---NERPVKCYICGGFGHISRDCPSESGNRRETTCYN 57
Query: 62 CSGQGHVAKDCTVKSS----------IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMA 111
C GH+++DC + + IIC CN GH AR+CPND C+ CHQAGH+A
Sbjct: 58 CGKPGHISRDCPEEHTHPVNPQRSRVIICRKCNQEGHIARDCPNDIV--CHNCHQAGHVA 115
Query: 112 KEC-----------PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++C PG A P V C CG GH++ DC
Sbjct: 116 RDCPNEALCHNCNQPGHLARNCPNEGV-----CRKCGQSGHIARDC 156
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 65/108 (60%), Gaps = 6/108 (5%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVG-IVCYKCNNYGHFARECATESVTCYNCSGQGH 67
CYNC GH CP++ + + I+C KCN GH AR+C + + C+NC GH
Sbjct: 55 CYNCGKPGHISRDCPEEHTHPVNPQRSRVIICRKCNQEGHIARDCPND-IVCHNCHQAGH 113
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
VA+DC + +C+NCN GH ARNCPN+ C C Q+GH+A++CP
Sbjct: 114 VARDCP--NEALCHNCNQPGHLARNCPNEGV--CRKCGQSGHIARDCP 157
>gi|170031591|ref|XP_001843668.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870496|gb|EDS33879.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 160
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 68/113 (60%), Gaps = 17/113 (15%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVK-SSIICYNCNSSGHFARNCPNDS 97
CYKCN GHFAR+C + CY C+G GH+A++C++ CYNCN SGH ARNCP S
Sbjct: 53 CYKCNQMGHFARDCKEDLDRCYRCNGSGHIARECSLSPDDSCCYNCNQSGHLARNCPEKS 112
Query: 98 SK----RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY C+++GH+++ CP T KS CY CG GHLS DC
Sbjct: 113 DRDLNVSCYNCNKSGHISRNCP--TGDKS----------CYSCGKIGHLSRDC 153
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 69/147 (46%), Gaps = 40/147 (27%)
Query: 36 GIVCYKCNNYGHFARECAT---------------------------ESVTCYNCSGQGHV 68
G C+KC+ GH+AR+C CY C+ GH
Sbjct: 3 GNTCFKCDRPGHYARDCQNVGGGGGGGRPGGPRGGGERREFGGGGGRREKCYKCNQMGHF 62
Query: 69 AKDCTVKSSIICYNCNSSGHFARNC---PNDSSKRCYACHQAGHMAKECPGQTAGKSPEP 125
A+DC + CY CN SGH AR C P+DS CY C+Q+GH+A+ CP ++
Sbjct: 63 ARDCK-EDLDRCYRCNGSGHIARECSLSPDDSC--CYNCNQSGHLARNCPEKSD------ 113
Query: 126 VVDMSLTCYVCGHQGHLSYDCKLVQKS 152
D++++CY C GH+S +C KS
Sbjct: 114 -RDLNVSCYNCNKSGHISRNCPTGDKS 139
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH +CP+KS D + + CY CN GH +R C T +CY+C GH+
Sbjct: 95 CYNCNQSGHLARNCPEKSDRD-----LNVSCYNCNKSGHISRNCPTGDKSCYSCGKIGHL 149
Query: 69 AKDCT 73
++DCT
Sbjct: 150 SRDCT 154
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 18/109 (16%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIV------------CYKCNNYGHFARECATE 55
+CY C GH+ C + R + G + CY CN GH AR C +
Sbjct: 52 KCYKCNQMGHFARDCKEDLDRCYRCNGSGHIARECSLSPDDSCCYNCNQSGHLARNCPEK 111
Query: 56 S-----VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK 99
S V+CYNC+ GH++++C CY+C GH +R+C + +
Sbjct: 112 SDRDLNVSCYNCNKSGHISRNCPT-GDKSCYSCGKIGHLSRDCTENKGR 159
>gi|345562029|gb|EGX45101.1| hypothetical protein AOL_s00173g202 [Arthrobotrys oligospora ATCC
24927]
Length = 549
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------TCYNC 62
CYNC + GH +CPQ+ A D I C C+ GH AR+C E C NC
Sbjct: 295 CYNCKETGHVSRACPQERQARDPSDIPSIKCVNCDQEGHRARDCPEERKQRRNPNACRNC 354
Query: 63 SGQGHVAKDCTVK---SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+GH AK+C S++ C C GHF+++CP+ C C Q GH A ECP
Sbjct: 355 GEEGHEAKECEKPRDASNVQCRKCEKMGHFSKDCPDAPKMTCRNCDQEGHRAAECPEPKK 414
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
G +TC CG +GH DC +K
Sbjct: 415 G----------MTCNNCGEEGHRRVDCTNPRK 436
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 69/150 (46%), Gaps = 24/150 (16%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT--ESVTCY 60
S +QC C GH+ CP D + C C+ GH A EC + +TC
Sbjct: 369 DASNVQCRKCEKMGHFSKDCP---------DAPKMTCRNCDQEGHRAAECPEPKKGMTCN 419
Query: 61 NCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP---NDSSKRCYACHQAGHMAKECPGQ 117
NC +GH DCT IIC NC+ GH R+CP + + +C C + GH AKECP
Sbjct: 420 NCGEEGHRRVDCTNPRKIICNNCDEEGHVGRDCPKPRDPARVKCRNCDEMGHSAKECPKP 479
Query: 118 TAGKSPEPVVDMS-LTCYVCGHQGHLSYDC 146
DMS + C CG GH S +C
Sbjct: 480 R---------DMSRIKCNECGEMGHWSRNC 500
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 16/114 (14%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
C +CN GHFA EC + +C C +GH A C C CN+ GH CP
Sbjct: 55 ACRRCNEEGHFAAECPNQKCSC--CGQKGHSASKCPTPK---CNICNTEGHIPFECPQKD 109
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
++ C C + GHM KECP + + C C GH + +C +K
Sbjct: 110 NQACRHCGETGHMVKECP-----------IRANEPCRNCQQLGHRAAECTNQRK 152
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 14/109 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C C + GH+ CP + C C GH A +C T C C+ +GH+
Sbjct: 56 CRRCNEEGHFAAECPNQK------------CSCCGQKGHSASKCPT--PKCNICNTEGHI 101
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
+C K + C +C +GH + CP +++ C C Q GH A EC Q
Sbjct: 102 PFECPQKDNQACRHCGETGHMVKECPIRANEPCRNCQQLGHRAAECTNQ 150
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 44/98 (44%), Gaps = 20/98 (20%)
Query: 7 IQCYNCFDFGHYQYSC--PQKSSADARGDKVGIVCYKCNNYGHFARECATES----VTCY 60
+ C NC + GH + C P+K I+C C+ GH R+C V C
Sbjct: 416 MTCNNCGEEGHRRVDCTNPRK-----------IICNNCDEEGHVGRDCPKPRDPARVKCR 464
Query: 61 NCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCPN 95
NC GH AK+C S I C C GH++RNC N
Sbjct: 465 NCDEMGHSAKECPKPRDMSRIKCNECGEMGHWSRNCTN 502
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 10/78 (12%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES-VTCY 60
S T +C C GH + CPQK + C C GH +EC + C
Sbjct: 85 SKCPTPKCNICNTEGHIPFECPQKDNQ---------ACRHCGETGHMVKECPIRANEPCR 135
Query: 61 NCSGQGHVAKDCTVKSSI 78
NC GH A +CT + +
Sbjct: 136 NCQQLGHRAAECTNQRKM 153
>gi|146104187|ref|XP_001469754.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania infantum JPCM5]
gi|398024252|ref|XP_003865287.1| universal minicircle sequence binding protein (UMSBP), putative
[Leishmania donovani]
gi|134074124|emb|CAM72866.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania infantum JPCM5]
gi|322503524|emb|CBZ38610.1| universal minicircle sequence binding protein (UMSBP), putative
[Leishmania donovani]
Length = 271
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 80/183 (43%), Gaps = 42/183 (22%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE------- 55
+ S+ C NC GHY CP+ AD++GD C++C GH REC E
Sbjct: 12 TESSTSCRNCGKEGHYARECPE---ADSKGDGRSTTCFRCGEEGHMTRECPNEARSGAAG 68
Query: 56 SVTCYNCSGQGHVAKDCT------VKSSIICYNCNSSGHFARNCPND------------- 96
++TC+ C GH+++DC CYNC GH +R+CP+
Sbjct: 69 AMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYNCGQEGHLSRDCPSSQGGSRGGYGQKRG 128
Query: 97 ---------SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ CY C AGH++++CP G S TCY CG GH+S DC
Sbjct: 129 RSGAQGGYGGDRTCYKCGDAGHISRDCPNGQGGYS----GAGDRTCYKCGDAGHISRDCP 184
Query: 148 LVQ 150
Q
Sbjct: 185 NGQ 187
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 75/173 (43%), Gaps = 34/173 (19%)
Query: 7 IQCYNCFDFGHYQYSCP--QKSSADARGDKVGI-----------VCYKCNNYGHFAREC- 52
+CYNC GH CP Q S G K G CYKC + GH +R+C
Sbjct: 97 FECYNCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYGGDRTCYKCGDAGHISRDCP 156
Query: 53 -------ATESVTCYNCSGQGHVAKDC-------TVKSSIICYNCNSSGHFARNCP---- 94
TCY C GH+++DC + CY C SGH +R CP
Sbjct: 157 NGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSRECPSAGS 216
Query: 95 NDSSKR-CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
N S R CY C + GH+++ECP + G TCY CG GH+S DC
Sbjct: 217 NGSGDRTCYKCGKPGHISRECP-EAGGSYGGSRGGGDRTCYKCGEAGHISRDC 268
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 46/181 (25%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE------- 55
+ + C+ C + GH CP + A G CY C GH +R+C +
Sbjct: 66 AAGAMTCFRCGEAGHMSRDCPNSAKPGA---AKGFECYNCGQEGHLSRDCPSSQGGSRGG 122
Query: 56 ----------------SVTCYNCSGQGHVAKDC-------TVKSSIICYNCNSSGHFARN 92
TCY C GH+++DC + CY C +GH +R+
Sbjct: 123 YGQKRGRSGAQGGYGGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRD 182
Query: 93 CPND-------SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYD 145
CPN ++CY C ++GHM++ECP + S + TCY CG GH+S +
Sbjct: 183 CPNGQGGYSGAGDRKCYKCGESGHMSRECPSAGSNGSGD------RTCYKCGKPGHISRE 236
Query: 146 C 146
C
Sbjct: 237 C 237
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 56/131 (42%), Gaps = 27/131 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSA-DARGDKVGIVCYKCNNYGHFAREC--------ATESVTC 59
CY C D GH CP GD+ CYKC + GH +R+C C
Sbjct: 142 CYKCGDAGHISRDCPNGQGGYSGAGDRT---CYKCGDAGHISRDCPNGQGGYSGAGDRKC 198
Query: 60 YNCSGQGHVAKDCTVKSS-----IICYNCNSSGHFARNCPN----------DSSKRCYAC 104
Y C GH++++C S CY C GH +R CP + CY C
Sbjct: 199 YKCGESGHMSRECPSAGSNGSGDRTCYKCGKPGHISRECPEAGGSYGGSRGGGDRTCYKC 258
Query: 105 HQAGHMAKECP 115
+AGH++++CP
Sbjct: 259 GEAGHISRDCP 269
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 20/111 (18%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSA-DARGDKVGIVCYKCNNYGHFAREC------AT 54
S CY C D GH CP GD+ CYKC GH +REC +
Sbjct: 163 SGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRK---CYKCGESGHMSRECPSAGSNGS 219
Query: 55 ESVTCYNCSGQGHVAKDC----------TVKSSIICYNCNSSGHFARNCPN 95
TCY C GH++++C CY C +GH +R+CP+
Sbjct: 220 GDRTCYKCGKPGHISRECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDCPS 270
>gi|427787167|gb|JAA59035.1| Putative e3 ubiquitin ligase [Rhipicephalus pulchellus]
Length = 240
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 80/169 (47%), Gaps = 31/169 (18%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDK-------------------------VGIV 38
++T +CY C GH+ C Q + G +
Sbjct: 2 SATTECYKCHKLGHFARECFQDGGSGGGGRGGMGGGGGPRGGGRGASRGRMDYKPPIREK 61
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARNCPNDS 97
CYKCN GHFAR+C CY C+G GH++KDC + CYNC GH AR C +
Sbjct: 62 CYKCNRIGHFARDCKEAEDRCYRCNGTGHISKDCQHGPDEMSCYNCGKMGHIAREC-KEQ 120
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
K CY CH+ GH++++C Q +S +SL CY+CG GH+S DC
Sbjct: 121 EKTCYICHKQGHISRDCE-QDERRSG---AGLSLQCYLCGKLGHISRDC 165
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 80/164 (48%), Gaps = 27/164 (16%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIV------------CYKCNNYGHFARECATE 55
+CY C GH+ C + R + G + CY C GH AREC +
Sbjct: 61 KCYKCNRIGHFARDCKEAEDRCYRCNGTGHISKDCQHGPDEMSCYNCGKMGHIARECKEQ 120
Query: 56 SVTCYNCSGQGHVAKDCTVKS-------SIICYNCNSSGHFARNCPNDS--SKRCYACHQ 106
TCY C QGH+++DC S+ CY C GH +R+CPN ++CY C
Sbjct: 121 EKTCYICHKQGHISRDCEQDERRSGAGLSLQCYLCGKLGHISRDCPNSERDDRKCYNCGH 180
Query: 107 AGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
GH++++CP AG + + V D+ CY C +GH++ +C+ +
Sbjct: 181 LGHISRDCP--EAGGN-DAVADV---CYRCNERGHIARNCRSTR 218
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT---ESVTCYNCSGQ 65
CY C GH C Q G + + CY C GH +R+C + CYNC
Sbjct: 124 CYICHKQGHISRDCEQDERRSGAG--LSLQCYLCGKLGHISRDCPNSERDDRKCYNCGHL 181
Query: 66 GHVAKDCTVKS-----SIICYNCNSSGHFARNCPN-DSSKRCYACHQAGHMAKEC 114
GH+++DC + +CY CN GH ARNC + ++ RCY C + GH+A+EC
Sbjct: 182 GHISRDCPEAGGNDAVADVCYRCNERGHIARNCRSTRANNRCYHCGEVGHLAREC 236
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT--C 59
S +CYNC GH CP+ DA V VCY+CN GH AR C + C
Sbjct: 168 SERDDRKCYNCGHLGHISRDCPEAGGNDA----VADVCYRCNERGHIARNCRSTRANNRC 223
Query: 60 YNCSGQGHVAKDCTVKS 76
Y+C GH+A++C +K+
Sbjct: 224 YHCGEVGHLARECEMKA 240
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 25/128 (19%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAK--------------DCTVKSSIICYNCN 84
CYKC+ GHFAREC + + G D CY CN
Sbjct: 7 CYKCHKLGHFARECFQDGGSGGGGRGGMGGGGGPRGGGRGASRGRMDYKPPIREKCYKCN 66
Query: 85 SSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSY 144
GHFAR+C ++ RCY C+ GH++K+C P+ ++CY CG GH++
Sbjct: 67 RIGHFARDC-KEAEDRCYRCNGTGHISKDCQ-----HGPD-----EMSCYNCGKMGHIAR 115
Query: 145 DCKLVQKS 152
+CK +K+
Sbjct: 116 ECKEQEKT 123
>gi|157876792|ref|XP_001686738.1| putative universal minicircle sequence binding protein [Leishmania
major strain Friedlin]
gi|68129813|emb|CAJ09119.1| putative universal minicircle sequence binding protein [Leishmania
major strain Friedlin]
Length = 271
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 81/183 (44%), Gaps = 42/183 (22%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE------- 55
+ S+ C NC GHY CP+ AD++GD+ C++C GH +REC E
Sbjct: 12 TESSTSCRNCGKEGHYARECPE---ADSKGDERSTTCFRCGEEGHMSRECPNEARSGAAG 68
Query: 56 SVTCYNCSGQGHVAKDCT------VKSSIICYNCNSSGHFARNCPN-------------- 95
++TC+ C GH+++DC CY C GH +R+CP+
Sbjct: 69 AMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRG 128
Query: 96 --------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ CY C AGH++++CP G S TCY CG GH+S DC
Sbjct: 129 RSGAQGGYSGDRTCYKCGDAGHISRDCPNGQGGYS----GAGDRTCYKCGDAGHISRDCP 184
Query: 148 LVQ 150
Q
Sbjct: 185 NGQ 187
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 74/173 (42%), Gaps = 34/173 (19%)
Query: 7 IQCYNCFDFGHYQYSCP--QKSSADARGDKVGI-----------VCYKCNNYGHFAREC- 52
+CY C GH CP Q S G K G CYKC + GH +R+C
Sbjct: 97 FECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYSGDRTCYKCGDAGHISRDCP 156
Query: 53 -------ATESVTCYNCSGQGHVAKDC-------TVKSSIICYNCNSSGHFARNCPN--- 95
TCY C GH+++DC + CY C SGH +R CP+
Sbjct: 157 NGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSRECPSAGS 216
Query: 96 --DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
S + CY C + GH+++ECP + G TCY CG GH+S DC
Sbjct: 217 TGSSDRACYKCGKPGHISRECP-EAGGSYGGSRGGGDRTCYKCGEAGHISRDC 268
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 74/181 (40%), Gaps = 46/181 (25%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE------- 55
+ + C+ C + GH CP + A G CYKC GH +R+C +
Sbjct: 66 AAGAMTCFRCGEAGHMSRDCPNSAKPGA---AKGFECYKCGQEGHLSRDCPSSQGGSRGG 122
Query: 56 ----------------SVTCYNCSGQGHVAKDC-------TVKSSIICYNCNSSGHFARN 92
TCY C GH+++DC + CY C +GH +R+
Sbjct: 123 YGQKRGRSGAQGGYSGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRD 182
Query: 93 CPND-------SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYD 145
CPN ++CY C ++GHM++ECP S CY CG GH+S +
Sbjct: 183 CPNGQGGYSGAGDRKCYKCGESGHMSRECP------SAGSTGSSDRACYKCGKPGHISRE 236
Query: 146 C 146
C
Sbjct: 237 C 237
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 57/131 (43%), Gaps = 27/131 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSA-DARGDKVGIVCYKCNNYGHFAREC--------ATESVTC 59
CY C D GH CP GD+ CYKC + GH +R+C C
Sbjct: 142 CYKCGDAGHISRDCPNGQGGYSGAGDRT---CYKCGDAGHISRDCPNGQGGYSGAGDRKC 198
Query: 60 YNCSGQGHVAKDC-----TVKSSIICYNCNSSGHFARNCPN----------DSSKRCYAC 104
Y C GH++++C T S CY C GH +R CP + CY C
Sbjct: 199 YKCGESGHMSRECPSAGSTGSSDRACYKCGKPGHISRECPEAGGSYGGSRGGGDRTCYKC 258
Query: 105 HQAGHMAKECP 115
+AGH++++CP
Sbjct: 259 GEAGHISRDCP 269
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 20/111 (18%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSA-DARGDKVGIVCYKCNNYGHFARECATESVT-- 58
S CY C D GH CP GD+ CYKC GH +REC + T
Sbjct: 163 SGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRK---CYKCGESGHMSRECPSAGSTGS 219
Query: 59 ----CYNCSGQGHVAKDC----------TVKSSIICYNCNSSGHFARNCPN 95
CY C GH++++C CY C +GH +R+CP+
Sbjct: 220 SDRACYKCGKPGHISRECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDCPS 270
>gi|729704|sp|Q04832.1|HEXP_LEIMA RecName: Full=DNA-binding protein HEXBP; AltName:
Full=Hexamer-binding protein
gi|159342|gb|AAA29245.1| HEXBP DNA binding protein [Leishmania major]
Length = 271
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 81/183 (44%), Gaps = 42/183 (22%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE------- 55
+ S+ C NC GHY CP+ AD++GD+ C++C GH +REC E
Sbjct: 12 TESSTSCRNCGKEGHYARECPE---ADSKGDERSTTCFRCGEEGHMSRECPNEARSGAAG 68
Query: 56 SVTCYNCSGQGHVAKDCT------VKSSIICYNCNSSGHFARNCPN-------------- 95
++TC+ C GH+++DC CY C GH +R+CP+
Sbjct: 69 AMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRG 128
Query: 96 --------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ CY C AGH++++CP G S TCY CG GH+S DC
Sbjct: 129 RSGAQGGYSGDRTCYKCGDAGHISRDCPNGQGGYS----GAGDRTCYKCGDAGHISRDCP 184
Query: 148 LVQ 150
Q
Sbjct: 185 NGQ 187
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 74/173 (42%), Gaps = 34/173 (19%)
Query: 7 IQCYNCFDFGHYQYSCP--QKSSADARGDKVGI-----------VCYKCNNYGHFAREC- 52
+CY C GH CP Q S G K G CYKC + GH +R+C
Sbjct: 97 FECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYSGDRTCYKCGDAGHISRDCP 156
Query: 53 -------ATESVTCYNCSGQGHVAKDC-------TVKSSIICYNCNSSGHFARNCPNDSS 98
TCY C GH+++DC + CY C SGH +R CP+ S
Sbjct: 157 NGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSRECPSAGS 216
Query: 99 -----KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY C + GH+++ECP + G TCY CG GH+S DC
Sbjct: 217 TGSGDRACYKCGKPGHISRECP-EAGGSYGGSRGGGDRTCYKCGEAGHISRDC 268
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 74/181 (40%), Gaps = 46/181 (25%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE------- 55
+ + C+ C + GH CP + A G CYKC GH +R+C +
Sbjct: 66 AAGAMTCFRCGEAGHMSRDCPNSAKPGA---AKGFECYKCGQEGHLSRDCPSSQGGSRGG 122
Query: 56 ----------------SVTCYNCSGQGHVAKDC-------TVKSSIICYNCNSSGHFARN 92
TCY C GH+++DC + CY C +GH +R+
Sbjct: 123 YGQKRGRSGAQGGYSGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRD 182
Query: 93 CPND-------SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYD 145
CPN ++CY C ++GHM++ECP S CY CG GH+S +
Sbjct: 183 CPNGQGGYSGAGDRKCYKCGESGHMSRECP------SAGSTGSGDRACYKCGKPGHISRE 236
Query: 146 C 146
C
Sbjct: 237 C 237
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 56/131 (42%), Gaps = 27/131 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSA-DARGDKVGIVCYKCNNYGHFAREC--------ATESVTC 59
CY C D GH CP GD+ CYKC + GH +R+C C
Sbjct: 142 CYKCGDAGHISRDCPNGQGGYSGAGDRT---CYKCGDAGHISRDCPNGQGGYSGAGDRKC 198
Query: 60 YNCSGQGHVAKDCTVKSSI-----ICYNCNSSGHFARNCPN----------DSSKRCYAC 104
Y C GH++++C S CY C GH +R CP + CY C
Sbjct: 199 YKCGESGHMSRECPSAGSTGSGDRACYKCGKPGHISRECPEAGGSYGGSRGGGDRTCYKC 258
Query: 105 HQAGHMAKECP 115
+AGH++++CP
Sbjct: 259 GEAGHISRDCP 269
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 20/111 (18%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSA-DARGDKVGIVCYKCNNYGHFARECATESVT-- 58
S CY C D GH CP GD+ CYKC GH +REC + T
Sbjct: 163 SGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRK---CYKCGESGHMSRECPSAGSTGS 219
Query: 59 ----CYNCSGQGHVAKDC----------TVKSSIICYNCNSSGHFARNCPN 95
CY C GH++++C CY C +GH +R+CP+
Sbjct: 220 GDRACYKCGKPGHISRECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDCPS 270
>gi|318087050|gb|ADV40117.1| putative E3 ubiquitin ligase [Latrodectus hesperus]
Length = 175
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVG------IVCYKCNNYGHFARECATESVT 58
S+ +CY C GH+ CP G + CY C GHFAREC T
Sbjct: 2 SSNECYKCHKSGHFARDCPSGDGGRGGGYRGDSRSSSRASCYNCGRSGHFARECRESDKT 61
Query: 59 CYNCSGQGHVAKDCT------VKSSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMA 111
CY+C GH+++DCT + CY C GH +R+CPN+ R CY+C GH++
Sbjct: 62 CYSCGKSGHISRDCTQGGGGGSDRKMTCYTCGKPGHASRDCPNERDDRKCYSCGDTGHIS 121
Query: 112 KECP-GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
++CP G AG + + V CY C GH++ +C+ + S
Sbjct: 122 RDCPEGGNAGDNDDTV------CYRCNESGHIARNCRNSRPS 157
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE--SVTCYNC 62
S CY+C GH C Q G + CY C GH +R+C E CY+C
Sbjct: 58 SDKTCYSCGKSGHISRDCTQGGGG---GSDRKMTCYTCGKPGHASRDCPNERDDRKCYSC 114
Query: 63 SGQGHVAKDCTV------KSSIICYNCNSSGHFARNCPNDS-SKRCYACHQAGHMAKEC 114
GH+++DC +CY CN SGH ARNC N S +CY+C + GH+A+EC
Sbjct: 115 GDTGHISRDCPEGGNAGDNDDTVCYRCNESGHIARNCRNSRPSNKCYSCGEVGHIAREC 173
>gi|154345732|ref|XP_001568803.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania braziliensis MHOM/BR/75/M2904]
gi|134066145|emb|CAM43935.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 276
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 79/183 (43%), Gaps = 42/183 (22%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE------- 55
+ S C NC GHY CP+ ADA+GD+ C++C GH +REC E
Sbjct: 12 TESGTGCRNCGKEGHYARECPE---ADAKGDERSTTCFRCGEAGHMSRECPNEAKSGAAG 68
Query: 56 SVTCYNCSGQGHVAKDCT------VKSSIICYNCNSSGHFARNCPND------------- 96
++ C+ C GH+++DC CY C GH +R+CP+
Sbjct: 69 AMACFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGGRGGYGQKRG 128
Query: 97 ---------SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ CY C AGH++++CP G S TCY CG GH+S DC
Sbjct: 129 RNGAQGGYGGDRTCYKCGDAGHISRDCPNSQGGYS----GAGDRTCYKCGESGHISRDCP 184
Query: 148 LVQ 150
Q
Sbjct: 185 NSQ 187
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 74/181 (40%), Gaps = 41/181 (22%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE------- 55
+ + C+ C + GH CP + A G CYKC GH +R+C +
Sbjct: 66 AAGAMACFRCGEAGHMSRDCPNSAKPGA---AKGFECYKCGQEGHLSRDCPSSQGGGRGG 122
Query: 56 ----------------SVTCYNCSGQGHVAKDC-------TVKSSIICYNCNSSGHFARN 92
TCY C GH+++DC + CY C SGH +R+
Sbjct: 123 YGQKRGRNGAQGGYGGDRTCYKCGDAGHISRDCPNSQGGYSGAGDRTCYKCGESGHISRD 182
Query: 93 CPND-------SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYD 145
CPN + CY C + GHM++ECP + G TCY CG GH+S +
Sbjct: 183 CPNSQGGYSGAGDRTCYKCGKPGHMSRECP-EAGGSYGGSRGGGDRTCYKCGKPGHMSRE 241
Query: 146 C 146
C
Sbjct: 242 C 242
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 70/178 (39%), Gaps = 39/178 (21%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSA------------DARGDKVG-IVCYKCNNYGHFARECA 53
+CY C GH CP A+G G CYKC + GH +R+C
Sbjct: 97 FECYKCGQEGHLSRDCPSSQGGGRGGYGQKRGRNGAQGGYGGDRTCYKCGDAGHISRDCP 156
Query: 54 TE--------SVTCYNCSGQGHVAKDC-------TVKSSIICYNCNSSGHFARNCPN--- 95
TCY C GH+++DC + CY C GH +R CP
Sbjct: 157 NSQGGYSGAGDRTCYKCGESGHISRDCPNSQGGYSGAGDRTCYKCGKPGHMSRECPEAGG 216
Query: 96 -------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY C + GHM++ECP + G TCY CG GH+S DC
Sbjct: 217 SYGGSRGGGDRTCYKCGKPGHMSRECP-EAGGSYGGSRGGGDRTCYKCGDSGHISRDC 273
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 54/136 (39%), Gaps = 32/136 (23%)
Query: 9 CYNCFDFGHYQYSCPQKSSA-DARGDKVGIVCYKCNNYGHFARECATE--------SVTC 59
CY C D GH CP GD+ CYKC GH +R+C TC
Sbjct: 142 CYKCGDAGHISRDCPNSQGGYSGAGDRT---CYKCGESGHISRDCPNSQGGYSGAGDRTC 198
Query: 60 YNCSGQGHVAKDCT----------VKSSIICYNCNSSGHFARNCPN----------DSSK 99
Y C GH++++C CY C GH +R CP +
Sbjct: 199 YKCGKPGHMSRECPEAGGSYGGSRGGGDRTCYKCGKPGHMSRECPEAGGSYGGSRGGGDR 258
Query: 100 RCYACHQAGHMAKECP 115
CY C +GH++++CP
Sbjct: 259 TCYKCGDSGHISRDCP 274
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 25/116 (21%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSA-DARGDKVGIVCYKCNNYGHFARECAT------ 54
S CY C + GH CP GD+ CYKC GH +REC
Sbjct: 163 SGAGDRTCYKCGESGHISRDCPNSQGGYSGAGDRT---CYKCGKPGHMSRECPEAGGSYG 219
Query: 55 -----ESVTCYNCSGQGHVAKDCT----------VKSSIICYNCNSSGHFARNCPN 95
TCY C GH++++C CY C SGH +R+CP+
Sbjct: 220 GSRGGGDRTCYKCGKPGHMSRECPEAGGSYGGSRGGGDRTCYKCGDSGHISRDCPS 275
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 96 DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
+S C C + GH A+ECP A + S TC+ CG GH+S +C KS
Sbjct: 13 ESGTGCRNCGKEGHYARECPEADA-----KGDERSTTCFRCGEAGHMSRECPNEAKS 64
>gi|58004799|gb|AAW62459.1| cellular nucleic acid binding protein mutant delta-RGG [synthetic
construct]
Length = 162
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 80/159 (50%), Gaps = 17/159 (10%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARG-----DKVGIVCYKCNNYGHFARECATESVTC 59
S+ +C+ C GH+ CP SS+ RG + +CY+C GH A++C + C
Sbjct: 2 SSNECFKCGRTGHWARECPTFSSS--RGFQFISSSLPDICYRCGESGHLAKDCDLQEDAC 59
Query: 60 YNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP- 115
YNC GH+AKDC + CYNC GH AR+C + ++CY+C + GH+ K+C
Sbjct: 60 YNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDCEHADEQKCYSCGEFGHIQKDCTK 119
Query: 116 ------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
G T + + CY CG GHL+ +C +
Sbjct: 120 VKCYRCGDTGHVAINCSKTSEVNCYRCGESGHLARECTI 158
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 61/128 (47%), Gaps = 28/128 (21%)
Query: 39 CYKCNNYGHFARECATESVT-------------CYNCSGQGHVAKDCTVKSSIICYNCNS 85
C+KC GH+AREC T S + CY C GH+AKDC ++ CYNC
Sbjct: 6 CFKCGRTGHWARECPTFSSSRGFQFISSSLPDICYRCGESGHLAKDCDLQEDA-CYNCGR 64
Query: 86 SGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHL 142
GH A++C +R CY C + GH+A++C K CY CG GH+
Sbjct: 65 GGHIAKDCKEPRKEREQCCYNCGKPGHLARDCEHADEQK-----------CYSCGEFGHI 113
Query: 143 SYDCKLVQ 150
DC V+
Sbjct: 114 QKDCTKVK 121
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 24/89 (26%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR------------CYACHQAGHMAKECPGQTAGKSP 123
SS C+ C +GH+AR CP SS R CY C ++GH+AK+C Q
Sbjct: 2 SSNECFKCGRTGHWARECPTFSSSRGFQFISSSLPDICYRCGESGHLAKDCDLQED---- 57
Query: 124 EPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
CY CG GH++ DCK +K
Sbjct: 58 --------ACYNCGRGGHIAKDCKEPRKE 78
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C + GH A C+ T V CY C G
Sbjct: 103 KCYSCGEFGHIQKDCTK------------VKCYRCGDTGHVAINCSKTSEVNCYRCGESG 150
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 151 HLARECTIEAT 161
>gi|401420042|ref|XP_003874510.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322490746|emb|CBZ26010.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 298
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 81/183 (44%), Gaps = 42/183 (22%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE------- 55
+ S+ C NC GHY CP+ AD++GD+ C++C GH +REC E
Sbjct: 12 TESSTGCRNCGKEGHYARECPE---ADSKGDERSSTCFRCGEEGHMSRECPNEARSGAAG 68
Query: 56 SVTCYNCSGQGHVAKDCT------VKSSIICYNCNSSGHFARNCPND------------- 96
++TC+ C GH+++DC CY C GH +R+CP+
Sbjct: 69 AMTCFRCGEAGHMSRDCPNSAKQGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRG 128
Query: 97 ---------SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ CY C AGH++++CP G S TCY CG GH+S DC
Sbjct: 129 RNGAQGGYGGDRACYKCGDAGHISRDCPNGQGGYS----GAGDRTCYKCGDAGHISRDCP 184
Query: 148 LVQ 150
Q
Sbjct: 185 NGQ 187
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 68/163 (41%), Gaps = 34/163 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSA-DARGDKVGIVCYKCNNYGHFAREC--------ATESVTC 59
CY C D GH CP GD+ CYKC + GH +R+C C
Sbjct: 142 CYKCGDAGHISRDCPNGQGGYSGAGDRT---CYKCGDAGHISRDCPNGQGGYSGAGDRKC 198
Query: 60 YNCSGQGHVAKDCTVKSSI-----ICYNCNSSGHFARNCPN-----------DSSKRCYA 103
Y C GH++++C S CY C GH +R CP S + CY
Sbjct: 199 YKCGESGHISRECPSAGSTGSGDRTCYKCGKPGHISRECPEAGGSYGGSRGGGSDRTCYK 258
Query: 104 CHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C +AGHM++ECP S CY CG GH+S DC
Sbjct: 259 CGEAGHMSRECP------SAGGTGSGDRACYKCGEAGHISRDC 295
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 75/181 (41%), Gaps = 46/181 (25%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE------- 55
+ + C+ C + GH CP + +G G CYKC GH +R+C +
Sbjct: 66 AAGAMTCFRCGEAGHMSRDCPNSAK---QGAAKGFECYKCGQEGHLSRDCPSSQGGSRGG 122
Query: 56 ----------------SVTCYNCSGQGHVAKDC-------TVKSSIICYNCNSSGHFARN 92
CY C GH+++DC + CY C +GH +R+
Sbjct: 123 YGQKRGRNGAQGGYGGDRACYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRD 182
Query: 93 CPND-------SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYD 145
CPN ++CY C ++GH+++ECP S TCY CG GH+S +
Sbjct: 183 CPNGQGGYSGAGDRKCYKCGESGHISRECP------SAGSTGSGDRTCYKCGKPGHISRE 236
Query: 146 C 146
C
Sbjct: 237 C 237
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 60/137 (43%), Gaps = 26/137 (18%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSA-DARGDKVGIVCYKCNNYGHFAREC------AT 54
S CY C D GH CP GD+ CYKC GH +REC +
Sbjct: 163 SGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRK---CYKCGESGHISRECPSAGSTGS 219
Query: 55 ESVTCYNCSGQGHVAKDC-----------TVKSSIICYNCNSSGHFARNCPN-----DSS 98
TCY C GH++++C S CY C +GH +R CP+
Sbjct: 220 GDRTCYKCGKPGHISRECPEAGGSYGGSRGGGSDRTCYKCGEAGHMSRECPSAGGTGSGD 279
Query: 99 KRCYACHQAGHMAKECP 115
+ CY C +AGH++++CP
Sbjct: 280 RACYKCGEAGHISRDCP 296
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 21/111 (18%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------- 54
S +CY C + GH CP S + GD+ CYKC GH +REC
Sbjct: 191 SGAGDRKCYKCGESGHISRECPSAGSTGS-GDRT---CYKCGKPGHISRECPEAGGSYGG 246
Query: 55 -----ESVTCYNCSGQGHVAKDC-----TVKSSIICYNCNSSGHFARNCPN 95
TCY C GH++++C T CY C +GH +R+CP+
Sbjct: 247 SRGGGSDRTCYKCGEAGHMSRECPSAGGTGSGDRACYKCGEAGHISRDCPS 297
>gi|324514516|gb|ADY45891.1| DNA-binding protein HEXBP [Ascaris suum]
Length = 146
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 74/145 (51%), Gaps = 26/145 (17%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---- 57
++++ +CY C + GH+ +CP + S RG G CY C GHFAREC ++
Sbjct: 3 NNSAEDECYKCHEKGHFARNCPNQESGARRG--AGGDCYNCGQPGHFARECPSQRGGGGR 60
Query: 58 ------------TCYNCSGQGHVAKDCTVK-----SSIICYNCNSSGHFARNCP---NDS 97
CY C G GH A++C CYNC GH +R CP +D
Sbjct: 61 YGGRGGGRGGQSECYQCGGYGHFARECPSDRRGGGGGQKCYNCGKFGHISRECPESGSDQ 120
Query: 98 SKRCYACHQAGHMAKECPGQTAGKS 122
SKRCY CHQ GH+++ECP + G++
Sbjct: 121 SKRCYNCHQIGHISRECPEEAMGRN 145
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 95 NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
N + CY CH+ GH A+ CP Q +G D CY CG GH + +C
Sbjct: 4 NSAEDECYKCHEKGHFARNCPNQESGARRGAGGD----CYNCGQPGHFAREC 51
>gi|149689038|gb|ABR27834.1| E3 ubiquitin ligase [Triatoma infestans]
Length = 136
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 68/125 (54%), Gaps = 14/125 (11%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIV-----CYKCNNYGHFARECATESVTC 59
+++ CY C GH+ CPQ + G G CYKCN +GHFAREC + C
Sbjct: 2 NSVTCYRCNRSGHFARECPQGGDRGSGGGGGGGYRGREKCYKCNRFGHFARECKEDQDRC 61
Query: 60 YNCSGQGHVAKDCTVKS-SIICYNCNSSGHFARNCPND--------SSKRCYACHQAGHM 110
Y C+ GH+AKDC + CYNCN +GH AR CP SS CY C++ GHM
Sbjct: 62 YRCNNVGHIAKDCQQSTDEPSCYNCNKTGHIARECPEQRENSRGGYSSGPCYTCNKPGHM 121
Query: 111 AKECP 115
A++CP
Sbjct: 122 ARDCP 126
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 63/130 (48%), Gaps = 28/130 (21%)
Query: 37 IVCYKCNNYGHFARECATESV---------------TCYNCSGQGHVAKDCTVKSSIICY 81
+ CY+CN GHFAREC CY C+ GH A++C + CY
Sbjct: 4 VTCYRCNRSGHFARECPQGGDRGSGGGGGGGYRGREKCYKCNRFGHFARECK-EDQDRCY 62
Query: 82 NCNSSGHFARNCPNDSSK-RCYACHQAGHMAKECPGQ----TAGKSPEPVVDMSLTCYVC 136
CN+ GH A++C + + CY C++ GH+A+ECP Q G S P CY C
Sbjct: 63 RCNNVGHIAKDCQQSTDEPSCYNCNKTGHIARECPEQRENSRGGYSSGP-------CYTC 115
Query: 137 GHQGHLSYDC 146
GH++ DC
Sbjct: 116 NKPGHMARDC 125
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 26/86 (30%)
Query: 76 SSIICYNCNSSGHFARNCPNDSS--------------KRCYACHQAGHMAKECPGQTAGK 121
+S+ CY CN SGHFAR CP ++CY C++ GH A+EC
Sbjct: 2 NSVTCYRCNRSGHFARECPQGGDRGSGGGGGGGYRGREKCYKCNRFGHFAREC------- 54
Query: 122 SPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ CY C + GH++ DC+
Sbjct: 55 -----KEDQDRCYRCNNVGHIAKDCQ 75
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
ST CYNC GH CP++ ++RG CY CN GH AR+C +CY
Sbjct: 75 QQSTDEPSCYNCNKTGHIARECPEQRE-NSRGGYSSGPCYTCNKPGHMARDCPEGVRSCY 133
>gi|71418284|ref|XP_810806.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi strain CL Brener]
gi|70875395|gb|EAN88955.1| universal minicircle sequence binding protein (UMSBP), putative
[Trypanosoma cruzi]
Length = 193
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 69/159 (43%), Gaps = 31/159 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------TCYNC 62
CYNC GH CP + G G CY C GH +REC T CYNC
Sbjct: 46 CYNCGQPGHLSRECPTRPP----GAMGGRACYNCGQPGHLSRECPTRPPGAMGGRACYNC 101
Query: 63 SGQGHVAKDCTVKSSII-----CYNCNSSGHFARNCPNDSSK--------RCYACHQAGH 109
GH++++C + + CYNC GH +R CPN + CY C Q GH
Sbjct: 102 GQPGHLSRECPTRPPGVMGDRACYNCGRMGHLSRECPNRPAGGFRGVARGACYHCQQEGH 161
Query: 110 MAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+A++CP G CY CG GH+S C +
Sbjct: 162 LARDCPNAPPGG--------ERACYNCGQTGHISRACPV 192
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 71/155 (45%), Gaps = 23/155 (14%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------TCYNC 62
C+ C + GH+ CP A GD+ CY C GH +REC T CYNC
Sbjct: 20 CHRCGETGHFARECPNIPPG-AMGDRA---CYNCGQPGHLSRECPTRPPGAMGGRACYNC 75
Query: 63 SGQGHVAKDCTVKSS-----IICYNCNSSGHFARNCPNDSS-----KRCYACHQAGHMAK 112
GH++++C + CYNC GH +R CP + CY C + GH+++
Sbjct: 76 GQPGHLSRECPTRPPGAMGGRACYNCGQPGHLSRECPTRPPGVMGDRACYNCGRMGHLSR 135
Query: 113 ECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
ECP + AG CY C +GHL+ DC
Sbjct: 136 ECPNRPAGGF---RGVARGACYHCQQEGHLARDCP 167
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 61/128 (47%), Gaps = 22/128 (17%)
Query: 36 GIVCYKCNNYGHFAREC------ATESVTCYNCSGQGHVAKDCTVK-----SSIICYNCN 84
G C++C GHFAREC A CYNC GH++++C + CYNC
Sbjct: 17 GSTCHRCGETGHFARECPNIPPGAMGDRACYNCGQPGHLSRECPTRPPGAMGGRACYNCG 76
Query: 85 SSGHFARNCPND-----SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
GH +R CP + CY C Q GH+++ECP + G V CY CG
Sbjct: 77 QPGHLSRECPTRPPGAMGGRACYNCGQPGHLSRECPTRPPG------VMGDRACYNCGRM 130
Query: 140 GHLSYDCK 147
GHLS +C
Sbjct: 131 GHLSRECP 138
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----TCYNCSG 64
CYNC GH CP + + RG G CY C GH AR+C CYNC
Sbjct: 124 CYNCGRMGHLSRECPNRPAGGFRGVARG-ACYHCQQEGHLARDCPNAPPGGERACYNCGQ 182
Query: 65 QGHVAKDCTVK 75
GH+++ C VK
Sbjct: 183 TGHISRACPVK 193
>gi|391339398|ref|XP_003744037.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Metaseiulus
occidentalis]
Length = 182
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 68/118 (57%), Gaps = 13/118 (11%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
CYKCN GHFAR+C CY C+G GH+AKDC + + CYNC +GH AR CP +
Sbjct: 54 CYKCNRLGHFARDCKETEDRCYRCNGTGHIAKDCQ-QGEMSCYNCGKTGHIARECP-EVD 111
Query: 99 KRCYACHQAGHMAKECP---------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
K CY C + GH+ ++CP G+ S E +D CYVCG GH+S +C+
Sbjct: 112 KSCYRCGKPGHIFRDCPEDGQKCYTCGRFGHFSRECPLDRR--CYVCGQGGHISRECQ 167
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 59/120 (49%), Gaps = 13/120 (10%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIV----------CYKCNNYGHFARECATESV 57
+CY C GH+ C + R + G + CY C GH AREC
Sbjct: 53 KCYKCNRLGHFARDCKETEDRCYRCNGTGHIAKDCQQGEMSCYNCGKTGHIARECPEVDK 112
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
+CY C GH+ +DC + CY C GHF+R CP D +RCY C Q GH+++EC G+
Sbjct: 113 SCYRCGKPGHIFRDCP-EDGQKCYTCGRFGHFSRECPLD--RRCYVCGQGGHISRECQGE 169
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 57/123 (46%), Gaps = 19/123 (15%)
Query: 36 GIVCYKCNNYGHFARECATES------VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHF 89
G CY+C+ GHFAREC+ G+G CY CN GHF
Sbjct: 4 GSECYRCHRTGHFARECSLPDDGERRGPRGGGRGGRGGGRGGFRGGFREKCYKCNRLGHF 63
Query: 90 ARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
AR+C ++ RCY C+ GH+AK+C ++CY CG GH++ +C V
Sbjct: 64 ARDC-KETEDRCYRCNGTGHIAKDC------------QQGEMSCYNCGKTGHIARECPEV 110
Query: 150 QKS 152
KS
Sbjct: 111 DKS 113
>gi|300122354|emb|CBK22926.2| unnamed protein product [Blastocystis hominis]
Length = 158
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 79/169 (46%), Gaps = 38/169 (22%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA------TESVTCY 60
++CY C GH CP +S G CY C +GH AR+C TESV CY
Sbjct: 1 MECYVCGQSGHKARDCPNRSQQKP---GAGKKCYVCGGFGHVARDCPNQNGENTESV-CY 56
Query: 61 NCSGQGHVAKDCTVK----------SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
NC GH+A DC + +IIC NCN GHFAR+CPN+ C C Q GH+
Sbjct: 57 NCGKPGHIAADCPEERTSRPTGRAAKTIICRNCNKEGHFARDCPNEVV--CRNCRQPGHI 114
Query: 111 AKEC-----------PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
A++C PG A P V C+ CG GH + DC +
Sbjct: 115 ARDCTNQAVCRNCNQPGHFARDCPNETV-----CHKCGQSGHKARDCPM 158
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 14/92 (15%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
+ TI C NC GH+ CP + +VC C GH AR+C ++V C NC
Sbjct: 80 AAKTIICRNCNKEGHFARDCPNE-----------VVCRNCRQPGHIARDCTNQAV-CRNC 127
Query: 63 SGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
+ GH A+DC + +C+ C SGH AR+CP
Sbjct: 128 NQPGHFARDCP--NETVCHKCGQSGHKARDCP 157
>gi|443897220|dbj|GAC74561.1| vesicle coat complex AP-2, alpha subunit [Pseudozyma antarctica T-34]
Length = 1140
Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 48/151 (31%), Positives = 67/151 (44%), Gaps = 32/151 (21%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----TCYNCS 63
+C+NC + GH +C +ADA+ CY C GH +C T + CY C
Sbjct: 995 RCFNCLEPGHESSACEAPRTADAKQ------CYGCGGKGHIRADCPTPASGAAKACYTCG 1048
Query: 64 GQGHVAKDC---------TVKSSIICYNCNSSGHFARNCPNDSS-------------KRC 101
QGH A+DC + C NC HFA++C ++ K C
Sbjct: 1049 DQGHRARDCPQNPKPPAAAESKPVTCRNCGQPNHFAKDCKAPAAPGTAQPKPKKSKLKSC 1108
Query: 102 YACHQAGHMAKECPGQTAGKSPEPVVDMSLT 132
Y C+Q GH+AKECP Q ++P +LT
Sbjct: 1109 YTCNQPGHIAKECPQQPMAEAPGSNAAAALT 1139
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 59 CYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCPNDSS---KRCYACHQAGHMAK 112
C+NC GH + C + CY C GH +CP +S K CY C GH A+
Sbjct: 996 CFNCLEPGHESSACEAPRTADAKQCYGCGGKGHIRADCPTPASGAAKACYTCGDQGHRAR 1055
Query: 113 ECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+CP K P +TC CG H + DCK
Sbjct: 1056 DCPQNP--KPPAAAESKPVTCRNCGQPNHFAKDCK 1088
>gi|270010243|gb|EFA06691.1| hypothetical protein TcasGA2_TC009622 [Tribolium castaneum]
Length = 449
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 77/154 (50%), Gaps = 21/154 (13%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARG---DKVGIVCYKCNNYGHFARECATESV 57
MSS S CY C GH+ C Q + ++ C+KCN GH+AR+C +S
Sbjct: 304 MSSGSI--CYKCNQPGHFARECSQPGGREGGRGGFNRSREKCHKCNKTGHYARDCKEDSA 361
Query: 58 TCYNCSGQGHVAKDCTVKSSII-CYNCNSSGHFARNCPND---SSKRCYACHQAGHMAKE 113
CY C G+GH AKDC + CYNC GH AR+CP +++ C+ C + GH+++
Sbjct: 362 RCYRCYGEGHFAKDCLQSPDMPSCYNCRKPGHIARSCPEGGGVANETCHNCQRPGHISRN 421
Query: 114 CPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
CP T CY+C GHL DC+
Sbjct: 422 CPENTK------------ICYLCHKPGHLKRDCQ 443
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 13/97 (13%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTCYNCS 63
+CY C+ GH+ C Q + CY C GH AR C + TC+NC
Sbjct: 362 RCYRCYGEGHFAKDCLQSPDMPS--------CYNCRKPGHIARSCPEGGGVANETCHNCQ 413
Query: 64 GQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR 100
GH++++C +++ ICY C+ GH R+C + ++
Sbjct: 414 RPGHISRNCP-ENTKICYLCHKPGHLKRDCQENDYRK 449
>gi|387914596|gb|AFK10907.1| cellular nucleic acid-binding protein-like protein [Callorhinchus
milii]
Length = 167
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGD---KVGI-----VCYKCNNYGHFARECATES 56
S+ +C+ C GH+ CP K+G +CY+C GH A++C +
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRVRGIRGRCKIGFTAARDICYRCGESGHLAKDCDLQE 61
Query: 57 VTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKE 113
CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + GH+ K+
Sbjct: 62 DACYNCGKGGHIAKDCKEPKKEREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKD 121
Query: 114 CP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
C G+T + + CY CG GHL+ +C +
Sbjct: 122 CTKVKCYRCGETGHVAINCSKTSEVNCYRCGEAGHLARECPI 163
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 59/133 (44%), Gaps = 33/133 (24%)
Query: 39 CYKCNNYGHFARECATESV------------------TCYNCSGQGHVAKDCTVKSSIIC 80
C+KC GH+AREC T CY C GH+AKDC ++ C
Sbjct: 6 CFKCGRTGHWARECPTGGGRVRGIRGRCKIGFTAARDICYRCGESGHLAKDCDLQEDA-C 64
Query: 81 YNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCG 137
YNC GH A++C +R CY C + GH+A++C K CY CG
Sbjct: 65 YNCGKGGHIAKDCKEPKKEREQCCYNCGKPGHLARDCDHADEQK-----------CYSCG 113
Query: 138 HQGHLSYDCKLVQ 150
GH+ DC V+
Sbjct: 114 EFGHIQKDCTKVK 126
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH C CY C +GH ++C V CY C GHV
Sbjct: 88 CYNCGKPGHLARDCDHADEQK---------CYSCGEFGHIQKDCT--KVKCYRCGETGHV 136
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
A +C+ S + CY C +GH AR CP +++
Sbjct: 137 AINCSKTSEVNCYRCGEAGHLARECPIEAT 166
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 29/94 (30%)
Query: 76 SSIICYNCNSSGHFARNCPND-----------------SSKRCYACHQAGHMAKECPGQT 118
SS C+ C +GH+AR CP + CY C ++GH+AK+C Q
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRVRGIRGRCKIGFTAARDICYRCGESGHLAKDCDLQE 61
Query: 119 AGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
CY CG GH++ DCK +K
Sbjct: 62 D------------ACYNCGKGGHIAKDCKEPKKE 83
>gi|392881264|gb|AFM89464.1| cellular nucleic acid-binding protein-like protein [Callorhinchus
milii]
Length = 167
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGD---KVGI-----VCYKCNNYGHFARECATES 56
S+ +C+ C GH+ CP K+G +CY+C GH A++C +
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRVRGIRGRCKIGFTAARDICYRCGESGHLAKDCDLQE 61
Query: 57 VTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKE 113
CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + GH+ K+
Sbjct: 62 DACYNCGKGGHIAKDCKEPKKEREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIRKD 121
Query: 114 CP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
C G+T + + CY CG GHL+ +C +
Sbjct: 122 CTKVKCYRCGETGHVAINCSKTSEVNCYRCGEAGHLARECPI 163
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 59/133 (44%), Gaps = 33/133 (24%)
Query: 39 CYKCNNYGHFARECATESV------------------TCYNCSGQGHVAKDCTVKSSIIC 80
C+KC GH+AREC T CY C GH+AKDC ++ C
Sbjct: 6 CFKCGRTGHWARECPTGGGRVRGIRGRCKIGFTAARDICYRCGESGHLAKDCDLQEDA-C 64
Query: 81 YNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCG 137
YNC GH A++C +R CY C + GH+A++C K CY CG
Sbjct: 65 YNCGKGGHIAKDCKEPKKEREQCCYNCGKPGHLARDCDHADEQK-----------CYSCG 113
Query: 138 HQGHLSYDCKLVQ 150
GH+ DC V+
Sbjct: 114 EFGHIRKDCTKVK 126
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH C CY C +GH ++C V CY C GHV
Sbjct: 88 CYNCGKPGHLARDCDHADEQK---------CYSCGEFGHIRKDCT--KVKCYRCGETGHV 136
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
A +C+ S + CY C +GH AR CP +++
Sbjct: 137 AINCSKTSEVNCYRCGEAGHLARECPIEAT 166
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 29/94 (30%)
Query: 76 SSIICYNCNSSGHFARNCPND-----------------SSKRCYACHQAGHMAKECPGQT 118
SS C+ C +GH+AR CP + CY C ++GH+AK+C Q
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRVRGIRGRCKIGFTAARDICYRCGESGHLAKDCDLQE 61
Query: 119 AGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
CY CG GH++ DCK +K
Sbjct: 62 D------------ACYNCGKGGHIAKDCKEPKKE 83
>gi|291393360|ref|XP_002713212.1| PREDICTED: zinc finger protein 9 isoform 4 [Oryctolagus cuniculus]
gi|296225970|ref|XP_002758718.1| PREDICTED: cellular nucleic acid-binding protein isoform 3
[Callithrix jacchus]
gi|332261813|ref|XP_003279961.1| PREDICTED: cellular nucleic acid-binding protein isoform 5
[Nomascus leucogenys]
gi|338714532|ref|XP_003363103.1| PREDICTED: cellular nucleic acid-binding protein-like [Equus
caballus]
gi|397518586|ref|XP_003829465.1| PREDICTED: cellular nucleic acid-binding protein isoform 4 [Pan
paniscus]
gi|402887093|ref|XP_003906939.1| PREDICTED: cellular nucleic acid-binding protein [Papio anubis]
gi|410037477|ref|XP_003950236.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410951820|ref|XP_003982591.1| PREDICTED: cellular nucleic acid-binding protein isoform 4 [Felis
catus]
gi|194389826|dbj|BAG60429.1| unnamed protein product [Homo sapiens]
Length = 160
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGI-VCYKCNNYGHFARECATESVTCYNCS 63
S+ +C+ C GH+ CP G +CY+C GH A++C + CYNC
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHLAKDCDLQEDACYNCG 61
Query: 64 GQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP----- 115
GH+AKDC + CYNC GH AR+C + ++CY+C + GH+ K+C
Sbjct: 62 RGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCY 121
Query: 116 --GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
G+T + + CY CG GHL+ +C +
Sbjct: 122 RCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 156
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 59/126 (46%), Gaps = 26/126 (20%)
Query: 39 CYKCNNYGHFARECATESV-----------TCYNCSGQGHVAKDCTVKSSIICYNCNSSG 87
C+KC GH+AREC T CY C GH+AKDC ++ CYNC G
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHLAKDCDLQEDA-CYNCGRGG 64
Query: 88 HFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSY 144
H A++C +R CY C + GH+A++C K CY CG GH+
Sbjct: 65 HIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK-----------CYSCGEFGHIQK 113
Query: 145 DCKLVQ 150
DC V+
Sbjct: 114 DCTKVK 119
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 101 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 148
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 149 HLARECTIEAT 159
>gi|91086229|ref|XP_972436.1| PREDICTED: similar to zinc finger protein [Tribolium castaneum]
Length = 146
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 77/154 (50%), Gaps = 21/154 (13%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARG---DKVGIVCYKCNNYGHFARECATESV 57
MSS S CY C GH+ C Q + ++ C+KCN GH+AR+C +S
Sbjct: 1 MSSGSI--CYKCNQPGHFARECSQPGGREGGRGGFNRSREKCHKCNKTGHYARDCKEDSA 58
Query: 58 TCYNCSGQGHVAKDCTVKSSII-CYNCNSSGHFARNCPND---SSKRCYACHQAGHMAKE 113
CY C G+GH AKDC + CYNC GH AR+CP +++ C+ C + GH+++
Sbjct: 59 RCYRCYGEGHFAKDCLQSPDMPSCYNCRKPGHIARSCPEGGGVANETCHNCQRPGHISRN 118
Query: 114 CPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
CP T CY+C GHL DC+
Sbjct: 119 CPENTK------------ICYLCHKPGHLKRDCQ 140
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTCYN 61
+ +CY C+ GH+ C Q + CY C GH AR C + TC+N
Sbjct: 57 SARCYRCYGEGHFAKDCLQSPDMPS--------CYNCRKPGHIARSCPEGGGVANETCHN 108
Query: 62 CSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR 100
C GH++++C +++ ICY C+ GH R+C + ++
Sbjct: 109 CQRPGHISRNCP-ENTKICYLCHKPGHLKRDCQENDYRK 146
>gi|297798314|ref|XP_002867041.1| hypothetical protein ARALYDRAFT_491032 [Arabidopsis lyrata subsp.
lyrata]
gi|297312877|gb|EFH43300.1| hypothetical protein ARALYDRAFT_491032 [Arabidopsis lyrata subsp.
lyrata]
Length = 257
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 67/132 (50%), Gaps = 28/132 (21%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV------CYKCNNYGHFARECATESVT---- 58
CYNC D GH+ C QKS + GD+ G CY C + GHFAR+C + VT
Sbjct: 126 CYNCGDAGHFARDCTQKSVGN--GDQRGAAGAGKDGCYNCGDIGHFARDCGNQKVTAGSV 183
Query: 59 --------CYNCSGQGHVAKDCTVKS--SIICYNCNSSGHFARNCP------NDSSKRCY 102
CY C G GH+A++C K S CY C SGH AR+C N +CY
Sbjct: 184 RSGGGSGSCYTCGGVGHIARECATKRQPSRGCYQCGGSGHLARDCDQRASGGNGGGNKCY 243
Query: 103 ACHQAGHMAKEC 114
+C + GH A+EC
Sbjct: 244 SCGKEGHFAREC 255
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT 54
CY C GH C Q++S G+ G CY C GHFAREC+
Sbjct: 215 CYQCGGSGHLARDCDQRASG---GNGGGNKCYSCGKEGHFARECSV 257
>gi|221114884|ref|XP_002154581.1| PREDICTED: DNA-binding protein HEXBP-like isoform 1 [Hydra
magnipapillata]
gi|449665534|ref|XP_004206169.1| PREDICTED: DNA-binding protein HEXBP-like isoform 2 [Hydra
magnipapillata]
Length = 209
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 74/155 (47%), Gaps = 24/155 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CY+C GH C Q+ G K CY+C GHFAR+C E CY C GH+
Sbjct: 63 CYSCGRSGHISRDCTQRG-----GRKGKQRCYRCGKDGHFARDCEGEEEMCYTCGKAGHI 117
Query: 69 AKDCTVKSSI-------ICYNCNSSGHFARNC--PNDSSKR----CYACHQAGHMAKECP 115
KDC S +CY+CN GHFAR C +DSS+ CY C++ GH A++C
Sbjct: 118 KKDCPESESFTSSTNEQVCYHCNKPGHFARECAEKDDSSRERDVTCYKCNEKGHFARDCH 177
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
++ K TC+ C GH + DC +
Sbjct: 178 NKSNDKK------NGNTCFKCHQVGHFARDCTEAE 206
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 80/175 (45%), Gaps = 39/175 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT----------ESVT 58
CY C + GHY +C + SS + K CY+C GH +R+C+ +S T
Sbjct: 4 CYKCGNEGHYARNCTEPSSTET-SQKSDKECYRCGEVGHLSRDCSKSSSGGGSGNFDSRT 62
Query: 59 CYNCSGQGHVAKDCT----VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
CY+C GH+++DCT K CY C GHFAR+C + + CY C +AGH+ K+C
Sbjct: 63 CYSCGRSGHISRDCTQRGGRKGKQRCYRCGKDGHFARDCEGE-EEMCYTCGKAGHIKKDC 121
Query: 115 P-----------------------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
P + + + + +TCY C +GH + DC
Sbjct: 122 PESESFTSSTNEQVCYHCNKPGHFARECAEKDDSSRERDVTCYKCNEKGHFARDC 176
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 59/131 (45%), Gaps = 34/131 (25%)
Query: 38 VCYKCNNYGHFARECATESVT---------CYNCSGQGHVAKDCTVK---------SSII 79
CYKC N GH+AR C S T CY C GH+++DC+ S
Sbjct: 3 TCYKCGNEGHYARNCTEPSSTETSQKSDKECYRCGEVGHLSRDCSKSSSGGGSGNFDSRT 62
Query: 80 CYNCNSSGHFARNCPNDSSK----RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
CY+C SGH +R+C + RCY C + GH A++C G+ CY
Sbjct: 63 CYSCGRSGHISRDCTQRGGRKGKQRCYRCGKDGHFARDCEGEEE------------MCYT 110
Query: 136 CGHQGHLSYDC 146
CG GH+ DC
Sbjct: 111 CGKAGHIKKDC 121
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 24/111 (21%)
Query: 58 TCYNCSGQGHVAKDCTV--------KSSIICYNCNSSGHFARNCP---------NDSSKR 100
TCY C +GH A++CT KS CY C GH +R+C N S+
Sbjct: 3 TCYKCGNEGHYARNCTEPSSTETSQKSDKECYRCGEVGHLSRDCSKSSSGGGSGNFDSRT 62
Query: 101 CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
CY+C ++GH++++C + K + CY CG GH + DC+ ++
Sbjct: 63 CYSCGRSGHISRDCTQRGGRKGKQ-------RCYRCGKDGHFARDCEGEEE 106
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES---- 56
SST+ CY+C GH+ C +K + D + CYKCN GHFAR+C +S
Sbjct: 128 TSSTNEQVCYHCNKPGHFARECAEKDDSSRERD---VTCYKCNEKGHFARDCHNKSNDKK 184
Query: 57 --VTCYNCSGQGHVAKDCT 73
TC+ C GH A+DCT
Sbjct: 185 NGNTCFKCHQVGHFARDCT 203
>gi|354488556|ref|XP_003506434.1| PREDICTED: cellular nucleic acid-binding protein-like [Cricetulus
griseus]
Length = 170
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 21/165 (12%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSS------ADARGDKVGI-----VCYKCNNYGHFARECA 53
S+ C+ C GH+ CP+ + + RG + +CY+C GH+A++C
Sbjct: 2 SSKTCFKCGRPGHWARECPKGGTRGRTPRSRGRGPQCSSASQSDICYRCGETGHYAKDCD 61
Query: 54 TESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
TCYNC +GH+AKDCT + CY C+ GH AR+C ++CY C + GH+
Sbjct: 62 LLQDTCYNCGKRGHIAKDCTQTKREREQCCYICSRPGHLARDCDRQEEQKCYTCGEFGHI 121
Query: 111 AKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
K+C G+ + ++CY CG GHL+ +C +
Sbjct: 122 QKDCTQIKCYRCGENGHMAVNCSKASEVSCYRCGEPGHLARECPI 166
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 61/137 (44%), Gaps = 36/137 (26%)
Query: 38 VCYKCNNYGHFAREC---------------------ATESVTCYNCSGQGHVAKDCTVKS 76
C+KC GH+AREC A++S CY C GH AKDC +
Sbjct: 5 TCFKCGRPGHWARECPKGGTRGRTPRSRGRGPQCSSASQSDICYRCGETGHYAKDCDLLQ 64
Query: 77 SIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTC 133
CYNC GH A++C +R CY C + GH+A++C Q K C
Sbjct: 65 DT-CYNCGKRGHIAKDCTQTKREREQCCYICSRPGHLARDCDRQEEQK-----------C 112
Query: 134 YVCGHQGHLSYDCKLVQ 150
Y CG GH+ DC ++
Sbjct: 113 YTCGEFGHIQKDCTQIK 129
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CY C GH C ++ CY C +GH ++C + CY C GH+
Sbjct: 91 CYICSRPGHLARDCDRQEEQK---------CYTCGEFGHIQKDCT--QIKCYRCGENGHM 139
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
A +C+ S + CY C GH AR CP +++
Sbjct: 140 AVNCSKASEVSCYRCGEPGHLARECPIEAT 169
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 97 SSKRCYACHQAGHMAKECP-GQTAGKSPEPV--------VDMSLTCYVCGHQGHLSYDCK 147
SSK C+ C + GH A+ECP G T G++P S CY CG GH + DC
Sbjct: 2 SSKTCFKCGRPGHWARECPKGGTRGRTPRSRGRGPQCSSASQSDICYRCGETGHYAKDCD 61
Query: 148 LVQKS 152
L+Q +
Sbjct: 62 LLQDT 66
>gi|291411194|ref|XP_002721877.1| PREDICTED: zinc finger protein 9 [Oryctolagus cuniculus]
Length = 171
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 75/161 (46%), Gaps = 28/161 (17%)
Query: 5 STIQCYNCFDFGHYQYSCPQKS--SADARGDKVGI---------VCYKCNNYGHFARECA 53
S +C+ C GH+ CP+K S +RG I +CY+C GH A+ C
Sbjct: 2 SNKECFKCGRSGHWARGCPRKEARSQGSRGRGRAIPGTSAMQADICYRCGESGHHAKNCD 61
Query: 54 TESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
CYNC GH+AKDC + CY C GH AR+C + ++CY+C + GH
Sbjct: 62 RLQDICYNCGKTGHIAKDCLEPKREREQYCYTCGRQGHLARDCTHLEEQKCYSCGEFGHF 121
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
KEC + CY CG GH++ +CK ++
Sbjct: 122 QKEC--------------TQVKCYRCGETGHVAINCKKAKQ 148
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 70/153 (45%), Gaps = 31/153 (20%)
Query: 1 MSSTSTIQ---CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV 57
+ TS +Q CY C + GH+ +C D++ +CY C GH A++C
Sbjct: 36 IPGTSAMQADICYRCGESGHHAKNC----------DRLQDICYNCGKTGHIAKDCLEPKR 85
Query: 58 T----CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKE 113
CY C QGH+A+DCT CY+C GHF + C + +CY C + GH+A
Sbjct: 86 EREQYCYTCGRQGHLARDCTHLEEQKCYSCGEFGHFQKEC---TQVKCYRCGETGHVAIN 142
Query: 114 CPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C + CY CG GHL+ +C
Sbjct: 143 CKKAK-----------QVNCYRCGEFGHLAREC 164
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 52/112 (46%), Gaps = 10/112 (8%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQGH 67
CYNC GH C + + CY C GH AR+C E CY+C GH
Sbjct: 67 CYNCGKTGHIAKDCLEPKREREQ------YCYTCGRQGHLARDCTHLEEQKCYSCGEFGH 120
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K+CT + CY C +GH A NC CY C + GH+A+EC + A
Sbjct: 121 FQKECT---QVKCYRCGETGHVAINCKKAKQVNCYRCGEFGHLARECDNEMA 169
>gi|336268999|ref|XP_003349261.1| hypothetical protein SMAC_05545 [Sordaria macrospora k-hell]
gi|380089834|emb|CCC12367.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 436
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 72/145 (49%), Gaps = 17/145 (11%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC + GH + SCP++ + ++V I C+ C+ GH R+C V C NC
Sbjct: 233 KCGNCGELGHIRKSCPEEPE---QKEEVVIKCFNCDEVGHRIRDCPIPRVDKFACKNCGQ 289
Query: 65 QGHVAKDCTVKSS---IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGK 121
GH DCT S + C CN +GHF+++CP + C C Q GHM+KEC
Sbjct: 290 NGHKVADCTEPRSAENVECRKCNETGHFSKDCPKTGPRGCRNCGQEGHMSKEC------- 342
Query: 122 SPEPVVDMSLTCYVCGHQGHLSYDC 146
EP ++ C C GH S +C
Sbjct: 343 -TEPKNMDNVQCRNCDEMGHFSKEC 366
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 21/135 (15%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTC 59
+ C NC GH C + SA+ + C KCN GHF+++C T C
Sbjct: 276 IPRVDKFACKNCGQNGHKVADCTEPRSAE------NVECRKCNETGHFSKDCPKTGPRGC 329
Query: 60 YNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCP---NDSSKRCYACHQAGHMAKE 113
NC +GH++K+CT ++ C NC+ GHF++ CP + + +C C + GH +
Sbjct: 330 RNCGQEGHMSKECTEPKNMDNVQCRNCDEMGHFSKECPKPRDITRVKCSNCQEMGHYKSK 389
Query: 114 CPGQTAGKSPEPVVD 128
CP P+VD
Sbjct: 390 CPN--------PLVD 396
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 14/71 (19%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
C CN GH+AR CPN + C C H+ KECP + C CG +
Sbjct: 47 CRRCNEEGHWARECPNAPAMTCRECGSPDHVVKECP--------------EVLCKNCGEK 92
Query: 140 GHLSYDCKLVQ 150
GH +C+ +
Sbjct: 93 GHRISECEAAR 103
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 38 VCYKCNNYGHFARECAT-ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
C +CN GH+AREC ++TC C HV K+C ++C NC GH C
Sbjct: 46 ACRRCNEEGHWARECPNAPAMTCRECGSPDHVVKEC---PEVLCKNCGEKGHRISEC 99
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQT 118
C C+ +GH A++C ++ C C S H + CP C C + GH EC
Sbjct: 47 CRRCNEEGHWARECPNAPAMTCRECGSPDHVVKECP---EVLCKNCGEKGHRISECEAAR 103
Query: 119 A 119
A
Sbjct: 104 A 104
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 11/70 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C C + GH+ CP + + C +C + H +EC V C NC +GH
Sbjct: 47 CRRCNEEGHWARECPNAPA---------MTCRECGSPDHVVKECP--EVLCKNCGEKGHR 95
Query: 69 AKDCTVKSSI 78
+C +I
Sbjct: 96 ISECEAARAI 105
>gi|241780604|ref|XP_002400201.1| E3 ubiquitin ligase, putative [Ixodes scapularis]
gi|215510686|gb|EEC20139.1| E3 ubiquitin ligase, putative [Ixodes scapularis]
Length = 181
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 63/121 (52%), Gaps = 15/121 (12%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARNCPNDS 97
CYKCN GHFAR+C CY C+G GH++KDC + CYNC GH AR C +
Sbjct: 11 CYKCNRIGHFARDCKEAEDRCYRCNGTGHISKDCQHGPDEMSCYNCGKMGHIARECK-EQ 69
Query: 98 SKRCYACHQAGHMAKECP------------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYD 145
K CY CH+ GH++++C G + P D CY CGH GH+S D
Sbjct: 70 EKTCYICHKQGHISRDCEQDERRCYLCGKLGHISRDCPSSERD-DRKCYNCGHLGHISRD 128
Query: 146 C 146
C
Sbjct: 129 C 129
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 21/157 (13%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIV------------CYKCNNYGHFARECATE 55
+CY C GH+ C + R + G + CY C GH AREC +
Sbjct: 10 KCYKCNRIGHFARDCKEAEDRCYRCNGTGHISKDCQHGPDEMSCYNCGKMGHIARECKEQ 69
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS--SKRCYACHQAGHMAKE 113
TCY C QGH+++DC + CY C GH +R+CP+ ++CY C GH++++
Sbjct: 70 EKTCYICHKQGHISRDCE-QDERRCYLCGKLGHISRDCPSSERDDRKCYNCGHLGHISRD 128
Query: 114 CPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
CP AG + + V D+ CY C +GH++ +C+ +
Sbjct: 129 CP--EAGGN-DTVADV---CYRCNERGHIARNCRSTR 159
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 63/132 (47%), Gaps = 23/132 (17%)
Query: 5 STIQCYNCFDFGHYQYSCPQKS------------SADARGDKVGIVCYKCNNYGHFAREC 52
+ CYNC GH C ++ S D D+ CY C GH +R+C
Sbjct: 49 DEMSCYNCGKMGHIARECKEQEKTCYICHKQGHISRDCEQDER--RCYLCGKLGHISRDC 106
Query: 53 AT---ESVTCYNCSGQGHVAKDCTVKS-----SIICYNCNSSGHFARNCPN-DSSKRCYA 103
+ + CYNC GH+++DC + +CY CN GH ARNC + ++ RCY
Sbjct: 107 PSSERDDRKCYNCGHLGHISRDCPEAGGNDTVADVCYRCNERGHIARNCRSTRTNNRCYH 166
Query: 104 CHQAGHMAKECP 115
C + GH+A+EC
Sbjct: 167 CGEVGHLARECE 178
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT--C 59
S +CYNC GH CP+ D V VCY+CN GH AR C + C
Sbjct: 109 SERDDRKCYNCGHLGHISRDCPEAGGNDT----VADVCYRCNERGHIARNCRSTRTNNRC 164
Query: 60 YNCSGQGHVAKDCTVKS 76
Y+C GH+A++C +K+
Sbjct: 165 YHCGEVGHLARECEMKA 181
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 11/73 (15%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
CY CN GHFAR+C ++ RCY C+ GH++K+C P+ ++CY CG
Sbjct: 11 CYKCNRIGHFARDCK-EAEDRCYRCNGTGHISKDCQ-----HGPD-----EMSCYNCGKM 59
Query: 140 GHLSYDCKLVQKS 152
GH++ +CK +K+
Sbjct: 60 GHIARECKEQEKT 72
>gi|448086305|ref|XP_004196068.1| Piso0_005509 [Millerozyma farinosa CBS 7064]
gi|359377490|emb|CCE85873.1| Piso0_005509 [Millerozyma farinosa CBS 7064]
Length = 178
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 75/157 (47%), Gaps = 31/157 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES--VTCYNCSGQG 66
CYNC + GH CPQ A + CY C + GH EC T+S CYNC G
Sbjct: 29 CYNCREAGHESNDCPQPKQASQK------QCYSCGDLGHLQGECPTQSQGSKCYNCGQFG 82
Query: 67 HVAKDCTVKS----------------SIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
H++K C+ S + CY C HFAR+C K CYAC + GH+
Sbjct: 83 HISKQCSSASGQAAVPKKANGARFPKAATCYKCGGPNHFARDCQAGLVK-CYACGKTGHI 141
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+KECP +G S ++ CY CG GH+S +C+
Sbjct: 142 SKECPAAASGDS------LAKACYQCGQVGHISKECE 172
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 56/119 (47%), Gaps = 9/119 (7%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCP 94
CYKC GH A C + CYNC GH + DC S CY+C GH CP
Sbjct: 8 TCYKCGEVGHLADNCQQQERLCYNCREAGHESNDCPQPKQASQKQCYSCGDLGHLQGECP 67
Query: 95 NDS-SKRCYACHQAGHMAKEC---PGQTA--GKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
S +CY C Q GH++K+C GQ A K+ + TCY CG H + DC+
Sbjct: 68 TQSQGSKCYNCGQFGHISKQCSSASGQAAVPKKANGARFPKAATCYKCGGPNHFARDCQ 126
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKV-------GIVCYKCNNYGHFARECATESVTCY 60
+CYNC FGH C S A K CYKC HFAR+C V CY
Sbjct: 74 KCYNCGQFGHISKQCSSASGQAAVPKKANGARFPKAATCYKCGGPNHFARDCQAGLVKCY 133
Query: 61 NCSGQGHVAKDCTVKSS-----IICYNCNSSGHFARNCPN 95
C GH++K+C +S CY C GH ++ C N
Sbjct: 134 ACGKTGHISKECPAAASGDSLAKACYQCGQVGHISKECEN 173
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT 58
++CY C GH CP A A GD + CY+C GH ++EC V
Sbjct: 127 AGLVKCYACGKTGHISKECP----AAASGDSLAKACYQCGQVGHISKECENADVV 177
>gi|380489650|emb|CCF36563.1| cellular nucleic acid-binding protein [Colletotrichum higginsianum]
Length = 275
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 70/149 (46%), Gaps = 24/149 (16%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC + GH SCPQ++ AR V I CY C GH R+C T V C NC
Sbjct: 72 KCSNCNELGHISKSCPQEAMEKAR---VTITCYNCGEEGHRVRDCPTPRVDKFACKNCGQ 128
Query: 65 QGHVAKDCT----VKSSIICYNCNSSGHFARNCPNDSSKRCYACH---QAGHMAKECPGQ 117
GH +C + + C C+ GHF+R+CP ACH GHM++EC
Sbjct: 129 SGHKVSECPEPRKAGADVECNKCHEMGHFSRDCPQGGGGGGRACHNCGNEGHMSREC--- 185
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
PEP + C C +GHLS DC
Sbjct: 186 -----PEP---RKIKCRNCDEEGHLSKDC 206
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 12/114 (10%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----TCYNCSG 64
C NC GH CP+ A A + C KC+ GHF+R+C C+NC
Sbjct: 123 CKNCGQSGHKVSECPEPRKAGA-----DVECNKCHEMGHFSRDCPQGGGGGGRACHNCGN 177
Query: 65 QGHVAKDCTVKSSIICYNCNSSGHFARNC--PNDSSK-RCYACHQAGHMAKECP 115
+GH++++C I C NC+ GH +++C P D S+ +C C + GH + CP
Sbjct: 178 EGHMSRECPEPRKIKCRNCDEEGHLSKDCDKPIDVSRIKCNNCGEMGHKSYRCP 231
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCS 63
+ ++C C + GH+ CPQ R C+ C N GH +REC + C NC
Sbjct: 144 ADVECNKCHEMGHFSRDCPQGGGGGGR------ACHNCGNEGHMSRECPEPRKIKCRNCD 197
Query: 64 GQGHVAKDCTVK---SSIICYNCNSSGHFARNCP 94
+GH++KDC S I C NC GH + CP
Sbjct: 198 EEGHLSKDCDKPIDVSRIKCNNCGEMGHKSYRCP 231
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Query: 99 KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++C C++ GH++K CP + K+ +++TCY CG +GH DC
Sbjct: 71 QKCSNCNELGHISKSCPQEAMEKA-----RVTITCYNCGEEGHRVRDC 113
>gi|301108595|ref|XP_002903379.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097751|gb|EEY55803.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 157
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 1 MSSTSTIQ--CYNCFDFGHYQYSCPQKSSADAR--GDKVGIVCYKCNNYGHFARECATES 56
M +T Q C+NC GH + CP+ S + G G C+ C GH R+C T +
Sbjct: 1 METTGADQRKCHNCGQGGHLRRDCPEAPSQEGGFGGYNSGAACFGCGKTGHLKRDCPTSA 60
Query: 57 --VTCYNCSGQGHVAKDCTVKSSII-CYNCNSSGHFARNCPND--SSKRCYACHQAGHMA 111
C+NC GH+ +DC ++ C+NC SGH R+CP + S++C+ C Q+GH+
Sbjct: 61 GGRACHNCGQVGHIRRDCPEEAQPPKCHNCGESGHLRRDCPQELRESRKCHHCGQSGHLR 120
Query: 112 KECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++CP + P D CY CG GH + +C
Sbjct: 121 RDCPDDSG-----PSED---KCYQCGDTGHWARNC 147
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES--VTCYN 61
S C+ C GH + CP + G C+ C GH R+C E+ C+N
Sbjct: 38 NSGAACFGCGKTGHLKRDCPTSAG--------GRACHNCGQVGHIRRDCPEEAQPPKCHN 89
Query: 62 CSGQGHVAKDCT--VKSSIICYNCNSSGHFARNCPND---SSKRCYACHQAGHMAKECPG 116
C GH+ +DC ++ S C++C SGH R+CP+D S +CY C GH A+ CPG
Sbjct: 90 CGESGHLRRDCPQELRESRKCHHCGQSGHLRRDCPDDSGPSEDKCYQCGDTGHWARNCPG 149
>gi|71416081|ref|XP_810084.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi strain CL Brener]
gi|70874565|gb|EAN88233.1| universal minicircle sequence binding protein (UMSBP), putative
[Trypanosoma cruzi]
Length = 193
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 67/159 (42%), Gaps = 31/159 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------TCYNC 62
CYNC GH CP + G G CY C GH +REC T CYNC
Sbjct: 46 CYNCGQPGHLSRECPTRPP----GAMGGRACYNCGQPGHLSRECPTRPPGAMGGRACYNC 101
Query: 63 SGQGHVAKDCTVKSS-----IICYNCNSSGHFARNCPNDSSK--------RCYACHQAGH 109
GH++++C + CYNC GH + CPN + CY C Q GH
Sbjct: 102 GQPGHLSRECPTRPPGAMGDRACYNCGRMGHLSHECPNRPAGGFRGVARGACYHCQQEGH 161
Query: 110 MAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+A++CP G CY CG GH+S C +
Sbjct: 162 LARDCPNAPPGG--------ERACYNCGQTGHISRACPV 192
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------TCYNC 62
C+ C + GH+ CP A GD+ CY C GH +REC T CYNC
Sbjct: 20 CHRCGETGHFARECPNIPPG-AMGDR---ACYNCGQPGHLSRECPTRPPGAMGGRACYNC 75
Query: 63 SGQGHVAKDCTVK-----SSIICYNCNSSGHFARNCPNDSS-----KRCYACHQAGHMAK 112
GH++++C + CYNC GH +R CP + CY C + GH++
Sbjct: 76 GQPGHLSRECPTRPPGAMGGRACYNCGQPGHLSRECPTRPPGAMGDRACYNCGRMGHLSH 135
Query: 113 ECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
ECP + AG CY C +GHL+ DC
Sbjct: 136 ECPNRPAGGF---RGVARGACYHCQQEGHLARDCP 167
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 63/133 (47%), Gaps = 22/133 (16%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC------ATESVTCYNCSGQGHVAKDCTVK-----SSII 79
R + G C++C GHFAREC A CYNC GH++++C +
Sbjct: 12 RIEGGGSTCHRCGETGHFARECPNIPPGAMGDRACYNCGQPGHLSRECPTRPPGAMGGRA 71
Query: 80 CYNCNSSGHFARNCPND-----SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
CYNC GH +R CP + CY C Q GH+++ECP + G CY
Sbjct: 72 CYNCGQPGHLSRECPTRPPGAMGGRACYNCGQPGHLSRECPTRPPG------AMGDRACY 125
Query: 135 VCGHQGHLSYDCK 147
CG GHLS++C
Sbjct: 126 NCGRMGHLSHECP 138
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----TCYNCSG 64
CYNC GH + CP + + RG G CY C GH AR+C CYNC
Sbjct: 124 CYNCGRMGHLSHECPNRPAGGFRGVARG-ACYHCQQEGHLARDCPNAPPGGERACYNCGQ 182
Query: 65 QGHVAKDCTVK 75
GH+++ C VK
Sbjct: 183 TGHISRACPVK 193
>gi|148666815|gb|EDK99231.1| cellular nucleic acid binding protein, isoform CRA_d [Mus musculus]
Length = 204
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 21/168 (12%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADAR-----------GDKVGIVCYKCNNYGHFAR 50
++ S+ +C+ C GH+ CP + +CY+C GH A+
Sbjct: 33 AAMSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAK 92
Query: 51 ECATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQA 107
+C + CYNC GH+AKDC + CYNC GH AR+C + ++CY+C +
Sbjct: 93 DCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEF 152
Query: 108 GHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
GH+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 153 GHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 200
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 59/136 (43%), Gaps = 36/136 (26%)
Query: 39 CYKCNNYGHFARECATESV---------------------TCYNCSGQGHVAKDCTVKSS 77
C+KC GH+AREC T CY C GH+AKDC ++
Sbjct: 40 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 99
Query: 78 IICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
CYNC GH A++C +R CY C + GH+A++C K CY
Sbjct: 100 A-CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK-----------CY 147
Query: 135 VCGHQGHLSYDCKLVQ 150
CG GH+ DC V+
Sbjct: 148 SCGEFGHIQKDCTKVK 163
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 145 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 192
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 193 HLARECTIEAT 203
>gi|164656387|ref|XP_001729321.1| hypothetical protein MGL_3356 [Malassezia globosa CBS 7966]
gi|159103212|gb|EDP42107.1| hypothetical protein MGL_3356 [Malassezia globosa CBS 7966]
Length = 171
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 63/121 (52%), Gaps = 17/121 (14%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT--------CY 60
C+ C + GH CP A+ARGD CY+C GH AR C + CY
Sbjct: 50 CFRCNEAGHVSRECPH---AEARGDAAAGECYRCGETGHIARMCPVSGGSGAPRNPRACY 106
Query: 61 NCSGQGHVAKDCT------VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
NC G GH+++DC+ +S+ CYNC + GH +R CP S + CY C + H+A +C
Sbjct: 107 NCGGVGHLSRDCSSAPGAAATASMKCYNCGNMGHLSRECPRPSQRSCYTCGSSDHLAAQC 166
Query: 115 P 115
P
Sbjct: 167 P 167
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 29/154 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV--TCYNCSGQG 66
CYNC GH +CP + CY C GH + +C + V TC+ C+ G
Sbjct: 7 CYNCGRPGHTIAACPSAGNP---------TCYNCGQQGHVSVDCTNQPVPKTCFRCNEAG 57
Query: 67 HVAKDCT------VKSSIICYNCNSSGHFARNCP-------NDSSKRCYACHQAGHMAKE 113
HV+++C ++ CY C +GH AR CP + + CY C GH++++
Sbjct: 58 HVSRECPHAEARGDAAAGECYRCGETGHIARMCPVSGGSGAPRNPRACYNCGGVGHLSRD 117
Query: 114 CPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
C +P S+ CY CG+ GHLS +C
Sbjct: 118 C-----SSAPGAAATASMKCYNCGNMGHLSRECP 146
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-------ATESVTCY 60
+CY C + GH CP + A + CY C GH +R+C AT S+ CY
Sbjct: 76 ECYRCGETGHIARMCPVSGGSGA--PRNPRACYNCGGVGHLSRDCSSAPGAAATASMKCY 133
Query: 61 NCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
NC GH++++C S CY C SS H A CP
Sbjct: 134 NCGNMGHLSRECPRPSQRSCYTCGSSDHLAAQCP 167
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS-SKRCYACHQAGHMAKECPG 116
+CYNC GH C + CYNC GH + +C N K C+ C++AGH+++ECP
Sbjct: 6 SCYNCGRPGHTIAACPSAGNPTCYNCGQQGHVSVDCTNQPVPKTCFRCNEAGHVSRECPH 65
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
A + CY CG GH++ C +
Sbjct: 66 AEARGD-----AAAGECYRCGETGHIARMCPV 92
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 9/56 (16%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV 57
++T++++CYNC + GH CP+ S CY C + H A +C +V
Sbjct: 125 AATASMKCYNCGNMGHLSRECPRPSQRS---------CYTCGSSDHLAAQCPQAAV 171
>gi|147899284|ref|NP_001084082.1| cellular nucleic acid binding protein [Xenopus laevis]
gi|1055224|gb|AAA81168.1| cellular nucleic acid binding protein [Xenopus laevis]
Length = 168
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 76/163 (46%), Gaps = 19/163 (11%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGI---------VCYKCNNYGHFARECATE 55
S+ +C+ C GH+ CP G + +CY+C GH A++C +
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRDICYRCGESGHLAKDCDLQ 61
Query: 56 SVTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAK 112
CYNC GH+AKDC + CYNC GH AR+C + RCY+C + GH+ K
Sbjct: 62 EDACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDCDHADEHRCYSCGEFGHIQK 121
Query: 113 ECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+C G+T + + CY CG GHL+ +C +
Sbjct: 122 DCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 164
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 34/134 (25%)
Query: 39 CYKCNNYGHFARECATESV-------------------TCYNCSGQGHVAKDCTVKSSII 79
C+KC GH+AREC T CY C GH+AKDC ++
Sbjct: 6 CFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRDICYRCGESGHLAKDCDLQEDA- 64
Query: 80 CYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVC 136
CYNC GH A++C +R CY C + GH+A++C + CY C
Sbjct: 65 CYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDCDHADEHR-----------CYSC 113
Query: 137 GHQGHLSYDCKLVQ 150
G GH+ DC V+
Sbjct: 114 GEFGHIQKDCTKVK 127
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 109 RCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 156
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 157 HLARECTIEAT 167
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 42/95 (44%), Gaps = 30/95 (31%)
Query: 76 SSIICYNCNSSGHFARNCPND----------------SSKR--CYACHQAGHMAKECPGQ 117
SS C+ C +GH+AR CP SS R CY C ++GH+AK+C Q
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRDICYRCGESGHLAKDCDLQ 61
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
CY CG GH++ DCK +K
Sbjct: 62 ED------------ACYNCGRGGHIAKDCKEPRKE 84
>gi|297263145|ref|XP_001093980.2| PREDICTED: hypothetical protein LOC705622 [Macaca mulatta]
Length = 343
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 21/168 (12%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADAR-----------GDKVGIVCYKCNNYGHFAR 50
++ S+ +C+ C GH+ CP + +CY+C GH A+
Sbjct: 172 AAMSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAK 231
Query: 51 ECATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQA 107
+C + CYNC GH+AKDC + CYNC GH AR+C + ++CY+C +
Sbjct: 232 DCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEF 291
Query: 108 GHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
GH+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 292 GHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 339
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 59/136 (43%), Gaps = 36/136 (26%)
Query: 39 CYKCNNYGHFARECATESV---------------------TCYNCSGQGHVAKDCTVKSS 77
C+KC GH+AREC T CY C GH+AKDC ++
Sbjct: 179 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 238
Query: 78 IICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
CYNC GH A++C +R CY C + GH+A++C K CY
Sbjct: 239 A-CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK-----------CY 286
Query: 135 VCGHQGHLSYDCKLVQ 150
CG GH+ DC V+
Sbjct: 287 SCGEFGHIQKDCTKVK 302
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + CY+C GH A C+ T V CY C G
Sbjct: 284 KCYSCGEFGHIQKDC------------TKVKCYRCGETGHVAINCSKTSEVNCYRCGESG 331
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 332 HLARECTIEAT 342
>gi|15233440|ref|NP_195326.1| cellular nucleic acid-binding protein [Arabidopsis thaliana]
gi|75318587|sp|O65639.1|CSP1_ARATH RecName: Full=Cold shock protein 1; Short=AtCSP1; AltName:
Full=Cold shock domain-containing protein 1
gi|3036806|emb|CAA18496.1| glycine-rich protein [Arabidopsis thaliana]
gi|7270554|emb|CAB81511.1| glycine-rich protein [Arabidopsis thaliana]
gi|110741941|dbj|BAE98911.1| glycine-rich protein [Arabidopsis thaliana]
gi|332661203|gb|AEE86603.1| cellular nucleic acid-binding protein [Arabidopsis thaliana]
Length = 299
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 76/170 (44%), Gaps = 34/170 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVG--IVCYKCNNYGHFARECATESV--------- 57
CYNC D GH+ C + D RG G CY C + GH AR+C +SV
Sbjct: 134 CYNCGDTGHFARDCTSAGNGDQRGATKGGNDGCYTCGDVGHVARDCTQKSVGNGDQRGAV 193
Query: 58 -----TCYNCSGQGHVAKDCTVK-----------SSIICYNCNSSGHFARNCPNDS--SK 99
CY C GH A+DCT K S CY+C GH AR+C S+
Sbjct: 194 KGGNDGCYTCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGVGHIARDCATKRQPSR 253
Query: 100 RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
CY C +GH+A++C + +G CY CG +GH + +C V
Sbjct: 254 GCYQCGGSGHLARDCDQRGSGGGGNDNA-----CYKCGKEGHFARECSSV 298
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 9 CYNCFDFGHYQYSC--PQKSSADARGDKVGIVCYKCNNYGHFARECATE----------- 55
CYNC + GH C R + G CY C + GHFAR+C +
Sbjct: 102 CYNCGELGHISKDCGIGGGGGGGERRSRGGEGCYNCGDTGHFARDCTSAGNGDQRGATKG 161
Query: 56 -SVTCYNCSGQGHVAKDCTVKS-------------SIICYNCNSSGHFARNCP------- 94
+ CY C GHVA+DCT KS + CY C GHFAR+C
Sbjct: 162 GNDGCYTCGDVGHVARDCTQKSVGNGDQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGN 221
Query: 95 ----NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
S CY+C GH+A++C +P S CY CG GHL+ DC
Sbjct: 222 VRSGGGGSGTCYSCGGVGHIARDCA-----TKRQP----SRGCYQCGGSGHLARDC 268
>gi|334342426|ref|XP_001378413.2| PREDICTED: cellular nucleic acid-binding protein-like isoform 1
[Monodelphis domestica]
gi|395516728|ref|XP_003762539.1| PREDICTED: cellular nucleic acid-binding protein isoform 1
[Sarcophilus harrisii]
Length = 177
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 79/172 (45%), Gaps = 28/172 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSS-------------ADARG-----DKVGIVCYKCNNYG 46
S+ +C+ C GH+ CP ARG + +CY+C G
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSARGFQFVSSSLPDICYRCGESG 61
Query: 47 HFARECATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYA 103
H A++C + CYNC GH+AKDC + CYNC GH AR+C + ++CY+
Sbjct: 62 HLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYS 121
Query: 104 CHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
C + GH+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 CGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 173
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 118 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 165
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 166 HLARECTIEAT 176
>gi|448081812|ref|XP_004194980.1| Piso0_005509 [Millerozyma farinosa CBS 7064]
gi|359376402|emb|CCE86984.1| Piso0_005509 [Millerozyma farinosa CBS 7064]
Length = 179
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 75/158 (47%), Gaps = 32/158 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES--VTCYNCSGQG 66
CYNC + GH CPQ A + CY C + GH +C T+S CYNC G
Sbjct: 29 CYNCREPGHESNDCPQPKQASQK------QCYSCGDLGHLQGDCPTQSQGSKCYNCGQFG 82
Query: 67 HVAKDCTVKS-----------------SIICYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
H++K CT S + CY C HFAR+C K CYAC + GH
Sbjct: 83 HISKQCTSASGQAAAAPKKANGARFSKAATCYKCGGPNHFARDCQAGLVK-CYACGKTGH 141
Query: 110 MAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
++KECP +G S ++ CY CG GH+S +C+
Sbjct: 142 ISKECPAAASGDS------LAKACYQCGQVGHISKECE 173
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCP 94
CYKC GH A C + CYNC GH + DC S CY+C GH +CP
Sbjct: 8 TCYKCGEVGHLADNCQQQQRLCYNCREPGHESNDCPQPKQASQKQCYSCGDLGHLQGDCP 67
Query: 95 NDS-SKRCYACHQAGHMAKECP---GQTAG---KSPEPVVDMSLTCYVCGHQGHLSYDCK 147
S +CY C Q GH++K+C GQ A K+ + TCY CG H + DC+
Sbjct: 68 TQSQGSKCYNCGQFGHISKQCTSASGQAAAAPKKANGARFSKAATCYKCGGPNHFARDCQ 127
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 44/101 (43%), Gaps = 13/101 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVG--------IVCYKCNNYGHFARECATESVTC 59
+CYNC FGH C S A K CYKC HFAR+C V C
Sbjct: 74 KCYNCGQFGHISKQCTSASGQAAAAPKKANGARFSKAATCYKCGGPNHFARDCQAGLVKC 133
Query: 60 YNCSGQGHVAKDCTVKSS-----IICYNCNSSGHFARNCPN 95
Y C GH++K+C +S CY C GH ++ C N
Sbjct: 134 YACGKTGHISKECPAAASGDSLAKACYQCGQVGHISKECEN 174
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT 58
++CY C GH CP A A GD + CY+C GH ++EC V
Sbjct: 131 VKCYACGKTGHISKECP----AAASGDSLAKACYQCGQVGHISKECENADVV 178
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 12/60 (20%)
Query: 99 KRCYACHQAGHMAKEC------------PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY C + GH+A C PG + P+P CY CG GHL DC
Sbjct: 7 RTCYKCGEVGHLADNCQQQQRLCYNCREPGHESNDCPQPKQASQKQCYSCGDLGHLQGDC 66
>gi|327265859|ref|XP_003217725.1| PREDICTED: cellular nucleic acid-binding protein-like [Anolis
carolinensis]
Length = 170
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR-----------GDKVGIVCYKCNNYGHFARECA 53
S+ +C+ C GH+ CP + +CY+C GH A++C
Sbjct: 2 SSNECFKCGRTGHWARECPTGMGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDCD 61
Query: 54 TESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
+ CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + GH+
Sbjct: 62 LQEDACYNCGRGGHIAKDCKEPRREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHI 121
Query: 111 AKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 166
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 59/136 (43%), Gaps = 36/136 (26%)
Query: 39 CYKCNNYGHFARECATESV---------------------TCYNCSGQGHVAKDCTVKSS 77
C+KC GH+AREC T CY C GH+AKDC ++
Sbjct: 6 CFKCGRTGHWARECPTGMGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 78 IICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
CYNC GH A++C +R CY C + GH+A++C K CY
Sbjct: 66 A-CYNCGRGGHIAKDCKEPRREREQCCYNCGKPGHLARDCDHADEQK-----------CY 113
Query: 135 VCGHQGHLSYDCKLVQ 150
CG GH+ DC V+
Sbjct: 114 SCGEFGHIQKDCTKVK 129
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 111 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 158
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 159 HLARECTIEAT 169
>gi|358389553|gb|EHK27145.1| hypothetical protein TRIVIDRAFT_188061 [Trichoderma virens Gv29-8]
Length = 458
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 73/145 (50%), Gaps = 15/145 (10%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+CYNC + GH C Q+ + + +K I CY C GH R+C V C NC
Sbjct: 259 KCYNCGELGHTTKGCSQEKT-EPSSEKPKISCYNCGAEGHRVRDCPEPRVDKFACKNCGK 317
Query: 65 QGHVAKDCTVK---SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGK 121
GH AK+C ++ C CN +GHFA++CP+ S+ C C Q GH++KEC
Sbjct: 318 SGHNAKECEEPPNMDNVECRKCNKTGHFAKDCPDGGSRACRNCGQEGHISKEC------- 370
Query: 122 SPEPVVDMSLTCYVCGHQGHLSYDC 146
+P ++TC C GH S +C
Sbjct: 371 -DQPKNMDNVTCRNCEETGHFSKEC 394
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 64/137 (46%), Gaps = 24/137 (17%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQ------------KSSADAR-----GDKVGIVCYKCNN 44
S I CYNC GH CP+ KS +A+ + + C KCN
Sbjct: 282 SEKPKISCYNCGAEGHRVRDCPEPRVDKFACKNCGKSGHNAKECEEPPNMDNVECRKCNK 341
Query: 45 YGHFARECATE-SVTCYNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNC--PNDSS 98
GHFA++C S C NC +GH++K+C ++ C NC +GHF++ C P D S
Sbjct: 342 TGHFAKDCPDGGSRACRNCGQEGHISKECDQPKNMDNVTCRNCEETGHFSKECPKPRDWS 401
Query: 99 K-RCYACHQAGHMAKEC 114
K +C C Q GH C
Sbjct: 402 KVQCSNCEQFGHTKVRC 418
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 26 SSADARGDKVGIVCYKCNNYGHFARECATE-SVTCYNCSGQGHVAKDCTVKSSIICYNCN 84
+ A A G C+ C GH EC TC+ C +GH+ KDC ++C NC
Sbjct: 56 NEAGASGAYANEKCFGCGEEGHRRAECPKAGEQTCHYCKKEGHMRKDCPEAPPMLCSNCG 115
Query: 85 SSGHFARNCPN 95
GHF +C N
Sbjct: 116 QEGHFRNSCEN 126
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
C+ C GH CP + C+ C + GHM K+CP ++P + C CG +
Sbjct: 69 CFGCGEEGHRRAECPKAGEQTCHYCKKEGHMRKDCP-----EAP------PMLCSNCGQE 117
Query: 140 GHLSYDCKLVQK 151
GH C+ +K
Sbjct: 118 GHFRNSCENARK 129
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 23/56 (41%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
C+ C +GH +C C+ C GH ++CP C C Q GH C
Sbjct: 69 CFGCGEEGHRRAECPKAGEQTCHYCKKEGHMRKDCPEAPPMLCSNCGQEGHFRNSC 124
>gi|433935|emb|CAA53777.1| UMS binding protein [Crithidia fasciculata]
Length = 116
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 66/120 (55%), Gaps = 18/120 (15%)
Query: 35 VGIVCYKCNNYGHFAREC--ATESVTCYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFAR 91
+ CYKC GH +REC A S TCYNC GH++++C + + CYNC S+ H +R
Sbjct: 3 AAVTCYKCGEAGHMSRECPKAAASRTCYNCGQTGHLSRECPSERKPKACYNCGSTEHLSR 62
Query: 92 NCPNDS-----SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CPN++ S+ CY C Q GH+++ECP + K CY CG HLS +C
Sbjct: 63 ECPNEAKTGADSRTCYNCGQTGHLSRECPSERKPKR----------CYNCGSTEHLSREC 112
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 16/122 (13%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV--TCYN 61
++ + CY C + GH CP+ +++ CY C GH +REC +E CYN
Sbjct: 2 SAAVTCYKCGEAGHMSRECPKAAASR--------TCYNCGQTGHLSRECPSERKPKACYN 53
Query: 62 CSGQGHVAKDC-----TVKSSIICYNCNSSGHFARNCPNDSS-KRCYACHQAGHMAKECP 115
C H++++C T S CYNC +GH +R CP++ KRCY C H+++ECP
Sbjct: 54 CGSTEHLSRECPNEAKTGADSRTCYNCGQTGHLSRECPSERKPKRCYNCGSTEHLSRECP 113
Query: 116 GQ 117
+
Sbjct: 114 DR 115
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 17/95 (17%)
Query: 74 VKSSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAGK------SPEPV 126
+ +++ CY C +GH +R CP ++ R CY C Q GH+++ECP + K S E +
Sbjct: 1 MSAAVTCYKCGEAGHMSRECPKAAASRTCYNCGQTGHLSRECPSERKPKACYNCGSTEHL 60
Query: 127 VDM----------SLTCYVCGHQGHLSYDCKLVQK 151
S TCY CG GHLS +C +K
Sbjct: 61 SRECPNEAKTGADSRTCYNCGQTGHLSRECPSERK 95
>gi|449473367|ref|XP_002187556.2| PREDICTED: cellular nucleic acid-binding protein isoform 1
[Taeniopygia guttata]
Length = 170
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR-----------GDKVGIVCYKCNNYGHFARECA 53
S+ +C+ C GH+ CP + +CY+C GH A++C
Sbjct: 2 SSNECFKCGRTGHWARECPTGMGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDCD 61
Query: 54 TESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
+ CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + GH+
Sbjct: 62 LQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHI 121
Query: 111 AKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 166
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 59/136 (43%), Gaps = 36/136 (26%)
Query: 39 CYKCNNYGHFARECATESV---------------------TCYNCSGQGHVAKDCTVKSS 77
C+KC GH+AREC T CY C GH+AKDC ++
Sbjct: 6 CFKCGRTGHWARECPTGMGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 78 IICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
CYNC GH A++C +R CY C + GH+A++C K CY
Sbjct: 66 A-CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK-----------CY 113
Query: 135 VCGHQGHLSYDCKLVQ 150
CG GH+ DC V+
Sbjct: 114 SCGEFGHIQKDCTKVK 129
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 111 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 158
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 159 HLARECTIEAT 169
>gi|149728229|ref|XP_001488727.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 3
[Equus caballus]
gi|291393358|ref|XP_002713211.1| PREDICTED: zinc finger protein 9 isoform 3 [Oryctolagus cuniculus]
gi|296225968|ref|XP_002758717.1| PREDICTED: cellular nucleic acid-binding protein isoform 2
[Callithrix jacchus]
gi|332261809|ref|XP_003279959.1| PREDICTED: cellular nucleic acid-binding protein isoform 3
[Nomascus leucogenys]
gi|397518584|ref|XP_003829464.1| PREDICTED: cellular nucleic acid-binding protein isoform 3 [Pan
paniscus]
gi|402887091|ref|XP_003906938.1| PREDICTED: cellular nucleic acid-binding protein [Papio anubis]
gi|410037475|ref|XP_003950235.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410951818|ref|XP_003982590.1| PREDICTED: cellular nucleic acid-binding protein isoform 3 [Felis
catus]
gi|16549164|dbj|BAB70769.1| unnamed protein product [Homo sapiens]
gi|119599677|gb|EAW79271.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_a [Homo sapiens]
gi|119599680|gb|EAW79274.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_a [Homo sapiens]
Length = 167
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 76/162 (46%), Gaps = 18/162 (11%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGI--------VCYKCNNYGHFARECATES 56
S+ +C+ C GH+ CP G +CY+C GH A++C +
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCDLQE 61
Query: 57 VTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKE 113
CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + GH+ K+
Sbjct: 62 DACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKD 121
Query: 114 CP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
C G+T + + CY CG GHL+ +C +
Sbjct: 122 CTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 163
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 33/133 (24%)
Query: 39 CYKCNNYGHFARECAT------------------ESVTCYNCSGQGHVAKDCTVKSSIIC 80
C+KC GH+AREC T + CY C GH+AKDC ++ C
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCDLQEDA-C 64
Query: 81 YNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCG 137
YNC GH A++C +R CY C + GH+A++C K CY CG
Sbjct: 65 YNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK-----------CYSCG 113
Query: 138 HQGHLSYDCKLVQ 150
GH+ DC V+
Sbjct: 114 EFGHIQKDCTKVK 126
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 108 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 155
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 156 HLARECTIEAT 166
>gi|291409842|ref|XP_002721203.1| PREDICTED: cellular nucleic acid binding protein-like isoform 2
[Oryctolagus cuniculus]
Length = 161
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGI-VCYKCNNYGHFAREC-ATESVTCYNC 62
S+ +C+ C GH+ CP G +CY+C GH A++C E CYNC
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHLAKDCDLQEDEACYNC 61
Query: 63 SGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP---- 115
GH+AKDC + CYNC GH AR+C + ++CY+C + GH+ K+C
Sbjct: 62 GRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKC 121
Query: 116 ---GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
G+T + + CY CG GHL+ +C +
Sbjct: 122 YRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 157
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 59/126 (46%), Gaps = 25/126 (19%)
Query: 39 CYKCNNYGHFARECATESV-----------TCYNCSGQGHVAKDCTVKSSIICYNCNSSG 87
C+KC GH+AREC T CY C GH+AKDC ++ CYNC G
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHLAKDCDLQEDEACYNCGRGG 65
Query: 88 HFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSY 144
H A++C +R CY C + GH+A++C K CY CG GH+
Sbjct: 66 HIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK-----------CYSCGEFGHIQK 114
Query: 145 DCKLVQ 150
DC V+
Sbjct: 115 DCTKVK 120
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 102 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 149
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 150 HLARECTIEAT 160
>gi|77735399|ref|NP_001029396.1| cellular nucleic acid-binding protein [Bos taurus]
gi|157909784|ref|NP_001103216.1| cellular nucleic acid-binding protein isoform 3 [Mus musculus]
gi|187608750|ref|NP_001120668.1| cellular nucleic acid-binding protein isoform 6 [Homo sapiens]
gi|356582435|ref|NP_001239194.1| cellular nucleic acid-binding protein isoform 2 [Canis lupus
familiaris]
gi|332261807|ref|XP_003279958.1| PREDICTED: cellular nucleic acid-binding protein isoform 2
[Nomascus leucogenys]
gi|332817847|ref|XP_003310041.1| PREDICTED: uncharacterized protein LOC460682 isoform 2 [Pan
troglodytes]
gi|332817851|ref|XP_003310042.1| PREDICTED: uncharacterized protein LOC460682 isoform 3 [Pan
troglodytes]
gi|334342424|ref|XP_003341812.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Monodelphis domestica]
gi|338714526|ref|XP_003363100.1| PREDICTED: cellular nucleic acid-binding protein-like [Equus
caballus]
gi|348553987|ref|XP_003462807.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Cavia porcellus]
gi|354482849|ref|XP_003503608.1| PREDICTED: cellular nucleic acid-binding protein isoform 2
[Cricetulus griseus]
gi|390475371|ref|XP_003734945.1| PREDICTED: cellular nucleic acid-binding protein [Callithrix
jacchus]
gi|395516730|ref|XP_003762540.1| PREDICTED: cellular nucleic acid-binding protein isoform 2
[Sarcophilus harrisii]
gi|397518582|ref|XP_003829463.1| PREDICTED: cellular nucleic acid-binding protein isoform 2 [Pan
paniscus]
gi|402887089|ref|XP_003906937.1| PREDICTED: cellular nucleic acid-binding protein [Papio anubis]
gi|410037470|ref|XP_003950233.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410951816|ref|XP_003982589.1| PREDICTED: cellular nucleic acid-binding protein isoform 2 [Felis
catus]
gi|426342038|ref|XP_004036323.1| PREDICTED: cellular nucleic acid-binding protein isoform 2 [Gorilla
gorilla gorilla]
gi|426342046|ref|XP_004036327.1| PREDICTED: cellular nucleic acid-binding protein isoform 6 [Gorilla
gorilla gorilla]
gi|110832801|sp|Q3T0Q6.1|CNBP_BOVIN RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|2136380|pir||A55499 zinc finger protein 9 - human
gi|292348|gb|AAA89198.1| nucleic acid binding protein [Mus sp.]
gi|12653049|gb|AAH00288.1| CNBP protein [Homo sapiens]
gi|15928890|gb|AAH14911.1| CNBP protein [Homo sapiens]
gi|55730956|emb|CAH92196.1| hypothetical protein [Pongo abelii]
gi|74207292|dbj|BAE30832.1| unnamed protein product [Mus musculus]
gi|74226825|dbj|BAE27058.1| unnamed protein product [Mus musculus]
gi|74354088|gb|AAI02299.1| CCHC-type zinc finger, nucleic acid binding protein [Bos taurus]
gi|119599678|gb|EAW79272.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_b [Homo sapiens]
gi|119599681|gb|EAW79275.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_b [Homo sapiens]
gi|149036675|gb|EDL91293.1| cellular nucleic acid binding protein 1, isoform CRA_a [Rattus
norvegicus]
gi|296474617|tpg|DAA16732.1| TPA: cellular nucleic acid-binding protein [Bos taurus]
gi|380816310|gb|AFE80029.1| cellular nucleic acid-binding protein isoform 6 [Macaca mulatta]
gi|383421415|gb|AFH33921.1| cellular nucleic acid-binding protein isoform 6 [Macaca mulatta]
gi|384949298|gb|AFI38254.1| cellular nucleic acid-binding protein isoform 6 [Macaca mulatta]
gi|410221752|gb|JAA08095.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
gi|410253688|gb|JAA14811.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
gi|410293498|gb|JAA25349.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
Length = 170
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR-----------GDKVGIVCYKCNNYGHFARECA 53
S+ +C+ C GH+ CP + +CY+C GH A++C
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
Query: 54 TESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
+ CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + GH+
Sbjct: 62 LQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHI 121
Query: 111 AKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 166
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 59/136 (43%), Gaps = 36/136 (26%)
Query: 39 CYKCNNYGHFARECATESV---------------------TCYNCSGQGHVAKDCTVKSS 77
C+KC GH+AREC T CY C GH+AKDC ++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 78 IICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
CYNC GH A++C +R CY C + GH+A++C K CY
Sbjct: 66 A-CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK-----------CY 113
Query: 135 VCGHQGHLSYDCKLVQ 150
CG GH+ DC V+
Sbjct: 114 SCGEFGHIQKDCTKVK 129
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 111 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 158
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 159 HLARECTIEAT 169
>gi|54696092|gb|AAV38418.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein) [synthetic construct]
gi|61368826|gb|AAX43243.1| zinc finger protein 9 [synthetic construct]
Length = 171
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR-----------GDKVGIVCYKCNNYGHFARECA 53
S+ +C+ C GH+ CP + +CY+C GH A++C
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
Query: 54 TESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
+ CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + GH+
Sbjct: 62 LQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHI 121
Query: 111 AKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 166
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 59/136 (43%), Gaps = 36/136 (26%)
Query: 39 CYKCNNYGHFARECATESV---------------------TCYNCSGQGHVAKDCTVKSS 77
C+KC GH+AREC T CY C GH+AKDC ++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 78 IICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
CYNC GH A++C +R CY C + GH+A++C K CY
Sbjct: 66 A-CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK-----------CY 113
Query: 135 VCGHQGHLSYDCKLVQ 150
CG GH+ DC V+
Sbjct: 114 SCGEFGHIQKDCTKVK 129
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 13/73 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 111 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 158
Query: 67 HVAKDCTVKSSII 79
H+A++CT++++ +
Sbjct: 159 HLARECTIEATAL 171
>gi|66800555|ref|XP_629203.1| hypothetical protein DDB_G0293328 [Dictyostelium discoideum AX4]
gi|60462584|gb|EAL60788.1| hypothetical protein DDB_G0293328 [Dictyostelium discoideum AX4]
Length = 131
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 65/131 (49%), Gaps = 22/131 (16%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA------- 53
MS CY C + GH +CP+ A R CY CN GH +REC
Sbjct: 1 MSEIKEKSCYKCKEVGHISRNCPKNPEAGDR------ACYVCNVVGHLSRECPQNPQPTF 54
Query: 54 --TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK-------RCYAC 104
+ + CY C+G GH A+DC CYNC GH +++CP+ S++ +CY C
Sbjct: 55 EKKDPIKCYQCNGFGHFARDCRRGRDNKCYNCGGLGHISKDCPSPSTRGQGRDAAKCYKC 114
Query: 105 HQAGHMAKECP 115
+Q GH+AK CP
Sbjct: 115 NQPGHIAKACP 125
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 80 CYNCNSSGHFARNCPNDSS---KRCYACHQAGHMAKECPGQTAGKSPEPVVDMS--LTCY 134
CY C GH +RNCP + + CY C+ GH+++ECP ++P+P + + CY
Sbjct: 9 CYKCKEVGHISRNCPKNPEAGDRACYVCNVVGHLSRECP-----QNPQPTFEKKDPIKCY 63
Query: 135 VCGHQGHLSYDCK 147
C GH + DC+
Sbjct: 64 QCNGFGHFARDCR 76
>gi|347921162|ref|NP_001231665.1| zinc finger protein 9 [Danio rerio]
gi|347921635|ref|NP_956043.2| zinc finger protein 9 [Danio rerio]
Length = 163
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKV--GIVCYKCNNYGHFARECATESVTCY 60
ST +C+ C GH+ +CP RG + CY+C GH AR+C CY
Sbjct: 2 DMSTSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACY 61
Query: 61 NCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP-- 115
NC GH+++DC + CYNC +GH AR+C + + ++CY+C GH+ K C
Sbjct: 62 NCHRSGHISRDCKEPKKEREQCCYNCGKAGHVARDCDHANEQKCYSCGGFGHIQKLCDKV 121
Query: 116 -----GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
G+ + + + CY CG GHL+ DC +
Sbjct: 122 KCYRCGEIGHVAVQCSKATEVNCYNCGKTGHLARDCSI 159
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 27/127 (21%)
Query: 39 CYKCNNYGHFARECAT------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSS 86
C+ C GH+ + C + + CY C QGH+A+DC ++ CYNC+ S
Sbjct: 8 CFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCE-QTEDACYNCHRS 66
Query: 87 GHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLS 143
GH +R+C +R CY C +AGH+A++C K CY CG GH+
Sbjct: 67 GHISRDCKEPKKEREQCCYNCGKAGHVARDCDHANEQK-----------CYSCGGFGHIQ 115
Query: 144 YDCKLVQ 150
C V+
Sbjct: 116 KLCDKVK 122
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH C + CY C +GH + C + V CY C GHV
Sbjct: 84 CYNCGKAGHVARDCDHANEQK---------CYSCGGFGHIQKLC--DKVKCYRCGEIGHV 132
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
A C+ + + CYNC +GH AR+C ++S
Sbjct: 133 AVQCSKATEVNCYNCGKTGHLARDCSIEAS 162
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 23/88 (26%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR-----------CYACHQAGHMAKECPGQTAGKSPE 124
S+ C+ C SGH+ +NCPN R CY C + GH+A++C E
Sbjct: 4 STSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDC---------E 54
Query: 125 PVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
D CY C GH+S DCK +K
Sbjct: 55 QTED---ACYNCHRSGHISRDCKEPKKE 79
>gi|335306205|ref|XP_001926395.3| PREDICTED: cellular nucleic acid-binding protein-like [Sus scrofa]
Length = 171
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 76/166 (45%), Gaps = 22/166 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR------------GDKVGIVCYKCNNYGHFAREC 52
S +C+ C GH+ CP+ A R + I+CY+C GH A+ C
Sbjct: 2 SNKECFKCGRSGHWARGCPKGGGARGRGSRGRGRGPHCSSTTLPIICYRCGEPGHHAKNC 61
Query: 53 ATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
+ CYNC GH+AKDC + CY C GH AR+C ++CY+C + GH
Sbjct: 62 DLQEDICYNCGKSGHIAKDCMEPKRERDQCCYTCGRPGHLARDCDRQEEQKCYSCGERGH 121
Query: 110 MAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 IQKDCTQVRCYRCGETGHVAINCSKPSEVNCYRCGESGHLARECPI 167
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 65/133 (48%), Gaps = 18/133 (13%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIV--------------CYKCNNYGH 47
S+T I CY C + GH+ +C + K G + CY C GH
Sbjct: 41 STTLPIICYRCGEPGHHAKNCDLQEDICYNCGKSGHIAKDCMEPKRERDQCCYTCGRPGH 100
Query: 48 FAREC-ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQ 106
AR+C E CY+C +GH+ KDCT + CY C +GH A NC S CY C +
Sbjct: 101 LARDCDRQEEQKCYSCGERGHIQKDCT---QVRCYRCGETGHVAINCSKPSEVNCYRCGE 157
Query: 107 AGHMAKECPGQTA 119
+GH+A+ECP +T
Sbjct: 158 SGHLARECPIETT 170
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 62/137 (45%), Gaps = 37/137 (27%)
Query: 39 CYKCNNYGHFAREC----------------------ATESVTCYNCSGQGHVAKDCTVKS 76
C+KC GH+AR C T + CY C GH AK+C ++
Sbjct: 6 CFKCGRSGHWARGCPKGGGARGRGSRGRGRGPHCSSTTLPIICYRCGEPGHHAKNCDLQE 65
Query: 77 SIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTC 133
I CYNC SGH A++C +R CY C + GH+A++C Q K C
Sbjct: 66 DI-CYNCGKSGHIAKDCMEPKRERDQCCYTCGRPGHLARDCDRQEEQK-----------C 113
Query: 134 YVCGHQGHLSYDCKLVQ 150
Y CG +GH+ DC V+
Sbjct: 114 YSCGERGHIQKDCTQVR 130
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 9/54 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT 58
+ ++CY C + GH +C + S + CY+C GH AREC E+ T
Sbjct: 127 TQVRCYRCGETGHVAINCSKPSEVN---------CYRCGESGHLARECPIETTT 171
>gi|345329903|ref|XP_003431441.1| PREDICTED: cellular nucleic acid-binding protein-like
[Ornithorhynchus anatinus]
Length = 167
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 75/162 (46%), Gaps = 18/162 (11%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGI--------VCYKCNNYGHFARECATES 56
S +C+ C GH+ CP G +CY+C GH A++C +
Sbjct: 2 SNNECFKCGRSGHWARECPTGGGRGRGLRSRGRGGFSSGRDICYRCGESGHLAKDCDLQE 61
Query: 57 VTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKE 113
CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + GH+ K+
Sbjct: 62 DACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKD 121
Query: 114 CP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
C G+T + + CY CG GHL+ +C +
Sbjct: 122 CTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 163
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 59/133 (44%), Gaps = 33/133 (24%)
Query: 39 CYKCNNYGHFARECATESV------------------TCYNCSGQGHVAKDCTVKSSIIC 80
C+KC GH+AREC T CY C GH+AKDC ++ C
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGLRSRGRGGFSSGRDICYRCGESGHLAKDCDLQEDA-C 64
Query: 81 YNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCG 137
YNC GH A++C +R CY C + GH+A++C K CY CG
Sbjct: 65 YNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK-----------CYSCG 113
Query: 138 HQGHLSYDCKLVQ 150
GH+ DC V+
Sbjct: 114 EFGHIQKDCTKVK 126
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 108 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 155
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 156 HLARECTIEAT 166
>gi|34784873|gb|AAH56793.1| Zinc finger protein 9 [Danio rerio]
Length = 161
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 77/157 (49%), Gaps = 12/157 (7%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKV--GIVCYKCNNYGHFARECATESVTCYN 61
ST +C+ C GH+ +CP RG + CY+C GH AR+C CYN
Sbjct: 1 MSTSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACYN 60
Query: 62 CSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP--- 115
C GH+++DC + CYNC +GH AR+C + + ++CY+C GH+ K C
Sbjct: 61 CHRSGHISRDCKEPKKEREQCCYNCGKAGHVARDCDHANEQKCYSCGGFGHIQKLCDKVK 120
Query: 116 ----GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
G+ + + + CY CG GHL+ DC +
Sbjct: 121 CYRCGEIGHVAVQCSKATEVNCYNCGKTGHLARDCSI 157
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 27/127 (21%)
Query: 39 CYKCNNYGHFARECAT------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSS 86
C+ C GH+ + C + + CY C QGH+A+DC ++ CYNC+ S
Sbjct: 6 CFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCE-QTEDACYNCHRS 64
Query: 87 GHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLS 143
GH +R+C +R CY C +AGH+A++C K CY CG GH+
Sbjct: 65 GHISRDCKEPKKEREQCCYNCGKAGHVARDCDHANEQK-----------CYSCGGFGHIQ 113
Query: 144 YDCKLVQ 150
C V+
Sbjct: 114 KLCDKVK 120
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH C + CY C +GH + C + V CY C GHV
Sbjct: 82 CYNCGKAGHVARDCDHANEQK---------CYSCGGFGHIQKLC--DKVKCYRCGEIGHV 130
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
A C+ + + CYNC +GH AR+C ++S
Sbjct: 131 AVQCSKATEVNCYNCGKTGHLARDCSIEAS 160
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 23/88 (26%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR-----------CYACHQAGHMAKECPGQTAGKSPE 124
S+ C+ C SGH+ +NCPN R CY C + GH+A++C E
Sbjct: 2 STSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDC---------E 52
Query: 125 PVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
D CY C GH+S DCK +K
Sbjct: 53 QTED---ACYNCHRSGHISRDCKEPKKE 77
>gi|119599682|gb|EAW79276.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_d [Homo sapiens]
gi|383421413|gb|AFH33920.1| cellular nucleic acid-binding protein isoform 3 [Macaca mulatta]
Length = 171
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 22/166 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR------------GDKVGIVCYKCNNYGHFAREC 52
S+ +C+ C GH+ CP + +CY+C GH A++C
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFQFVSSSLPDICYRCGESGHLAKDC 61
Query: 53 ATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
+ CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + GH
Sbjct: 62 DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGH 121
Query: 110 MAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 IQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 167
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 112 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 159
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 160 HLARECTIEAT 170
>gi|2895760|gb|AAC32813.1| universal minicircle sequence binding protein [Crithidia
fasciculata]
gi|2895761|gb|AAC32814.1| universal minicircle sequence binding protein [Crithidia
fasciculata]
Length = 116
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 68/120 (56%), Gaps = 18/120 (15%)
Query: 35 VGIVCYKCNNYGHFAREC--ATESVTCYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFAR 91
+ CYKC GH +REC A S TCYNC GH++++C + + CYNC S+ H +R
Sbjct: 3 AAVTCYKCGEAGHMSRECPKAAASRTCYNCGQTGHLSRECPSERKPKACYNCGSTEHLSR 62
Query: 92 NCPNDS-----SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CPN++ S+ CY C Q+GH++++CP + K+ CY CG HLS +C
Sbjct: 63 ECPNEAKTGADSRTCYNCGQSGHLSRDCPSERKPKA----------CYNCGSTEHLSREC 112
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 16/122 (13%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE--SVTCYN 61
++ + CY C + GH CP+ +++ CY C GH +REC +E CYN
Sbjct: 2 SAAVTCYKCGEAGHMSRECPKAAASR--------TCYNCGQTGHLSRECPSERKPKACYN 53
Query: 62 CSGQGHVAKDC-----TVKSSIICYNCNSSGHFARNCPND-SSKRCYACHQAGHMAKECP 115
C H++++C T S CYNC SGH +R+CP++ K CY C H+++ECP
Sbjct: 54 CGSTEHLSRECPNEAKTGADSRTCYNCGQSGHLSRDCPSERKPKACYNCGSTEHLSRECP 113
Query: 116 GQ 117
+
Sbjct: 114 DR 115
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 15/100 (15%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE------S 56
+ ++ CYNC GH CP + A CY C + H +REC E S
Sbjct: 23 AAASRTCYNCGQTGHLSRECPSERKPKA--------CYNCGSTEHLSRECPNEAKTGADS 74
Query: 57 VTCYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNCPN 95
TCYNC GH+++DC + + CYNC S+ H +R CP+
Sbjct: 75 RTCYNCGQSGHLSRDCPSERKPKACYNCGSTEHLSRECPD 114
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 17/95 (17%)
Query: 74 VKSSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAGKS---------- 122
+ +++ CY C +GH +R CP ++ R CY C Q GH+++ECP + K+
Sbjct: 1 MSAAVTCYKCGEAGHMSRECPKAAASRTCYNCGQTGHLSRECPSERKPKACYNCGSTEHL 60
Query: 123 ----PEPVVDM--SLTCYVCGHQGHLSYDCKLVQK 151
P S TCY CG GHLS DC +K
Sbjct: 61 SRECPNEAKTGADSRTCYNCGQSGHLSRDCPSERK 95
>gi|310792827|gb|EFQ28288.1| zinc knuckle [Glomerella graminicola M1.001]
Length = 454
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 72/162 (44%), Gaps = 26/162 (16%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC + GH SCPQ++ AR + I CY C GH R+C T V C NC
Sbjct: 247 KCINCNELGHISKSCPQEAMEKAR---ITITCYNCGEEGHRVRDCPTPRVDKFACKNCGQ 303
Query: 65 QGHVAKDCT----VKSSIICYNCNSSGHFARNCPNDSSKRCYACH---QAGHMAKECP-- 115
GH +CT + C C+ GHF+R+CP ACH GH+++ECP
Sbjct: 304 SGHKVSECTEPRKAGDDVECNKCHEMGHFSRDCPQGGGGGGRACHNCGNEGHISRECPEP 363
Query: 116 -----------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G + +PV + C CG GH SY C
Sbjct: 364 RKIKCRNCDADGHLSKDCDKPVDVTRIKCNNCGEMGHKSYRC 405
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 25/135 (18%)
Query: 6 TIQCYNCFDFGHYQYSCP----------------QKSSADARGDKVG--IVCYKCNNYGH 47
TI CYNC + GH CP K S K G + C KC+ GH
Sbjct: 272 TITCYNCGEEGHRVRDCPTPRVDKFACKNCGQSGHKVSECTEPRKAGDDVECNKCHEMGH 331
Query: 48 FARECATESV----TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC--PNDSSK-R 100
F+R+C C+NC +GH++++C I C NC++ GH +++C P D ++ +
Sbjct: 332 FSRDCPQGGGGGGRACHNCGNEGHISRECPEPRKIKCRNCDADGHLSKDCDKPVDVTRIK 391
Query: 101 CYACHQAGHMAKECP 115
C C + GH + CP
Sbjct: 392 CNNCGEMGHKSYRCP 406
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQ 65
++C C + GH+ CPQ R C+ C N GH +REC + C NC
Sbjct: 321 VECNKCHEMGHFSRDCPQGGGGGGR------ACHNCGNEGHISRECPEPRKIKCRNCDAD 374
Query: 66 GHVAKDCTVK---SSIICYNCNSSGHFARNCPN 95
GH++KDC + I C NC GH + CPN
Sbjct: 375 GHLSKDCDKPVDVTRIKCNNCGEMGHKSYRCPN 407
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQGH 67
C+NC GH + CP++ C C GH R+C ++TC C +GH
Sbjct: 34 CFNCGQSGHNKADCPERPKG------FDGTCRACGQEGHSRRDCPDAPAMTCRICGEEGH 87
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNC 93
+ KDC K + C NC GH C
Sbjct: 88 IRKDCPQKPADACRNCLEEGHETVEC 113
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 14/96 (14%)
Query: 59 CYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
C+NC GH DC + C C GH R+CP+ + C C + GH+ K+CP
Sbjct: 34 CFNCGQSGHNKADCPERPKGFDGTCRACGQEGHSRRDCPDAPAMTCRICGEEGHIRKDCP 93
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
+ A C C +GH + +CK +K
Sbjct: 94 QKPAD-----------ACRNCLEEGHETVECKAPRK 118
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 38 VCYKCNNYGHFARECATESV----TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
C+ C GH +C TC C +GH +DC ++ C C GH ++C
Sbjct: 33 ACFNCGQSGHNKADCPERPKGFDGTCRACGQEGHSRRDCPDAPAMTCRICGEEGHIRKDC 92
Query: 94 PNDSSKRCYACHQAGHMAKEC 114
P + C C + GH EC
Sbjct: 93 PQKPADACRNCLEEGHETVEC 113
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Query: 99 KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++C C++ GH++K CP + K+ +++TCY CG +GH DC
Sbjct: 246 QKCINCNELGHISKSCPQEAMEKA-----RITITCYNCGEEGHRVRDC 288
>gi|345329901|ref|XP_003431440.1| PREDICTED: cellular nucleic acid-binding protein-like
[Ornithorhynchus anatinus]
Length = 170
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR-----------GDKVGIVCYKCNNYGHFARECA 53
S +C+ C GH+ CP + +CY+C GH A++C
Sbjct: 2 SNNECFKCGRSGHWARECPTGGGRGRGLRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
Query: 54 TESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
+ CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + GH+
Sbjct: 62 LQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHI 121
Query: 111 AKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 166
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 59/136 (43%), Gaps = 36/136 (26%)
Query: 39 CYKCNNYGHFARECATESV---------------------TCYNCSGQGHVAKDCTVKSS 77
C+KC GH+AREC T CY C GH+AKDC ++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGLRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 78 IICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
CYNC GH A++C +R CY C + GH+A++C K CY
Sbjct: 66 A-CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK-----------CY 113
Query: 135 VCGHQGHLSYDCKLVQ 150
CG GH+ DC V+
Sbjct: 114 SCGEFGHIQKDCTKVK 129
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 111 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 158
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 159 HLARECTIEAT 169
>gi|55925630|ref|NP_083434.1| zinc finger CCHC domain-containing protein 13 [Mus musculus]
gi|12854262|dbj|BAB29977.1| unnamed protein product [Mus musculus]
gi|21425582|emb|CAD33940.1| cellular nucleic acid binding-like protein [Mus musculus]
gi|148682147|gb|EDL14094.1| cellular nucleic acid binding protein 2 [Mus musculus]
gi|148877851|gb|AAI45773.1| Zinc finger, CCHC domain containing 13 [Mus musculus]
gi|148878274|gb|AAI45775.1| Zinc finger, CCHC domain containing 13 [Mus musculus]
Length = 170
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 79/169 (46%), Gaps = 24/169 (14%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGI-----------VCYKCNNYGHFA 49
MSS S C+ C GH+ CP+ + VCY+C GH+A
Sbjct: 1 MSSKS---CFKCGHSGHWARECPKGGTRGRTARGRTRGPQCSTANQSDVCYRCGETGHYA 57
Query: 50 RECATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQ 106
++C TCYNC +GH+AKDCT + CY C+ GH AR+C ++CY C +
Sbjct: 58 KDCDLLQDTCYNCGRRGHIAKDCTQAKREREQCCYICSQPGHLARDCNRQEEQKCYTCGE 117
Query: 107 AGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
GH+ K+C G+ + ++CY CG GHL+ +C +
Sbjct: 118 FGHIQKDCTQIKCYRCGENGHMAVNCSKTSEVSCYRCGESGHLARECPI 166
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 61/136 (44%), Gaps = 36/136 (26%)
Query: 39 CYKCNNYGHFAREC---------------------ATESVTCYNCSGQGHVAKDCTVKSS 77
C+KC + GH+AREC A +S CY C GH AKDC +
Sbjct: 6 CFKCGHSGHWARECPKGGTRGRTARGRTRGPQCSTANQSDVCYRCGETGHYAKDCDLLQD 65
Query: 78 IICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
CYNC GH A++C +R CY C Q GH+A++C Q K CY
Sbjct: 66 T-CYNCGRRGHIAKDCTQAKREREQCCYICSQPGHLARDCNRQEEQK-----------CY 113
Query: 135 VCGHQGHLSYDCKLVQ 150
CG GH+ DC ++
Sbjct: 114 TCGEFGHIQKDCTQIK 129
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CY C GH C ++ CY C +GH ++C + CY C GH+
Sbjct: 91 CYICSQPGHLARDCNRQEEQK---------CYTCGEFGHIQKDCT--QIKCYRCGENGHM 139
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
A +C+ S + CY C SGH AR CP +++
Sbjct: 140 AVNCSKTSEVSCYRCGESGHLARECPIEAT 169
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 97 SSKRCYACHQAGHMAKECP--------GQTAGKSPE-PVVDMSLTCYVCGHQGHLSYDCK 147
SSK C+ C +GH A+ECP + + P+ + S CY CG GH + DC
Sbjct: 2 SSKSCFKCGHSGHWARECPKGGTRGRTARGRTRGPQCSTANQSDVCYRCGETGHYAKDCD 61
Query: 148 LVQKS 152
L+Q +
Sbjct: 62 LLQDT 66
>gi|302421536|ref|XP_003008598.1| cellular nucleic acid-binding protein [Verticillium albo-atrum
VaMs.102]
gi|261351744|gb|EEY14172.1| cellular nucleic acid-binding protein [Verticillium albo-atrum
VaMs.102]
Length = 459
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 76/158 (48%), Gaps = 22/158 (13%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARG-DKVGIVCYKCNNYGHFARECAT---ESV 57
+ T +C NC + GH +C +AD + +KV I CY C+ GH R+C +
Sbjct: 225 APTGKPRCTNCKELGHISKNC----TADRQEIEKVSIRCYNCDEDGHRVRDCPVPRKDKF 280
Query: 58 TCYNCSGQGHVAKDCTVKSS---IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
C NC+ GH A DCT + + C C+ GHF+R+CP S+ C C Q GH+AKEC
Sbjct: 281 ACKNCNQPGHKAADCTEPRNADGVECNKCHEMGHFSRDCPQGGSRTCRNCDQEGHIAKEC 340
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
PEP + C C GH +C Q S
Sbjct: 341 --------PEP---RRMQCRNCDEYGHTGRECPKPQDS 367
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
TC NC GH+ ++C ++C CN GH R+CPN ++ C C Q GH+ EC
Sbjct: 40 TCNNCGEPGHMRRECPSLPPMVCIFCNEEGHMRRDCPNKPAEVCRNCQQEGHLVSEC 96
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 40/110 (36%), Gaps = 30/110 (27%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-ESVTCYNCSGQ 65
++C C + GH+ CPQ S C C+ GH A+EC + C NC
Sbjct: 304 VECNKCHEMGHFSRDCPQGGSR---------TCRNCDQEGHIAKECPEPRRMQCRNCDEY 354
Query: 66 GHVAKDCTVK--------------------SSIICYNCNSSGHFARNCPN 95
GH ++C S + C NC GH NC N
Sbjct: 355 GHTGRECPKPQDSKSKLSVPFLCPFANRSVSRVKCLNCGEMGHKKYNCTN 404
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 38 VCYKCNNYGHFARECAT-ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
C C GH REC + + C C+ +GH+ +DC K + +C NC GH C N
Sbjct: 40 TCNNCGEPGHMRRECPSLPPMVCIFCNEEGHMRRDCPNKPAEVCRNCQQEGHLVSECNN 98
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 11/73 (15%)
Query: 79 ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGH 138
C NC GH R CP+ C C++ GHM ++CP + A C C
Sbjct: 40 TCNNCGEPGHMRRECPSLPPMVCIFCNEEGHMRRDCPNKPA-----------EVCRNCQQ 88
Query: 139 QGHLSYDCKLVQK 151
+GHL +C +K
Sbjct: 89 EGHLVSECNNPRK 101
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 10/71 (14%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-TCYNCSGQGH 67
C NC + GH + CP +VC CN GH R+C + C NC +GH
Sbjct: 41 CNNCGEPGHMRRECPSLPP---------MVCIFCNEEGHMRRDCPNKPAEVCRNCQQEGH 91
Query: 68 VAKDCTVKSSI 78
+ +C I
Sbjct: 92 LVSECNNPRKI 102
>gi|392343296|ref|XP_003754844.1| PREDICTED: cellular nucleic acid-binding protein-like [Rattus
norvegicus]
gi|392355786|ref|XP_003752133.1| PREDICTED: cellular nucleic acid-binding protein-like [Rattus
norvegicus]
gi|149055591|gb|EDM07175.1| rCG38105 [Rattus norvegicus]
Length = 170
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 29/165 (17%)
Query: 9 CYNCFDFGHYQYSCPQ---------------KSSADARGDKVGIVCYKCNNYGHFARECA 53
C+ C GH+ CP+ + S+ ++ D VCY+C GH+A++C
Sbjct: 6 CFKCGRSGHWARECPKGGTRGRTTRGRTRGPQCSSASQSD----VCYRCGETGHYAKDCD 61
Query: 54 TESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
TCYNC +GH+AKDCT + CY C+ GH AR+C ++CY C + GH+
Sbjct: 62 LLQDTCYNCGRRGHIAKDCTQAKREREQCCYICSRPGHLARDCDRQEEQKCYTCGEFGHI 121
Query: 111 AKECPG---QTAGKSPEPVVDMS----LTCYVCGHQGHLSYDCKL 148
K+C G++ V+ S ++CY CG GHL+ +C +
Sbjct: 122 QKDCTQIKCYRCGENGHMAVNCSKASEVSCYRCGESGHLARECPI 166
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 62/139 (44%), Gaps = 36/139 (25%)
Query: 36 GIVCYKCNNYGHFAREC---------------------ATESVTCYNCSGQGHVAKDCTV 74
G C+KC GH+AREC A++S CY C GH AKDC +
Sbjct: 3 GKSCFKCGRSGHWARECPKGGTRGRTTRGRTRGPQCSSASQSDVCYRCGETGHYAKDCDL 62
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSL 131
CYNC GH A++C +R CY C + GH+A++C Q K
Sbjct: 63 LQDT-CYNCGRRGHIAKDCTQAKREREQCCYICSRPGHLARDCDRQEEQK---------- 111
Query: 132 TCYVCGHQGHLSYDCKLVQ 150
CY CG GH+ DC ++
Sbjct: 112 -CYTCGEFGHIQKDCTQIK 129
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CY C GH C ++ CY C +GH ++C + CY C GH+
Sbjct: 91 CYICSRPGHLARDCDRQEEQK---------CYTCGEFGHIQKDCT--QIKCYRCGENGHM 139
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
A +C+ S + CY C SGH AR CP +++
Sbjct: 140 AVNCSKASEVSCYRCGESGHLARECPIEAT 169
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES-VTCYNCSGQG 66
+CY C +FGH Q C Q I CY+C GH A C+ S V+CY C G
Sbjct: 111 KCYTCGEFGHIQKDCTQ------------IKCYRCGENGHMAVNCSKASEVSCYRCGESG 158
Query: 67 HVAKDCTVKSS 77
H+A++C ++++
Sbjct: 159 HLARECPIEAT 169
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Query: 97 SSKRCYACHQAGHMAKECP--------GQTAGKSPE-PVVDMSLTCYVCGHQGHLSYDCK 147
S K C+ C ++GH A+ECP + + P+ S CY CG GH + DC
Sbjct: 2 SGKSCFKCGRSGHWARECPKGGTRGRTTRGRTRGPQCSSASQSDVCYRCGETGHYAKDCD 61
Query: 148 LVQKS 152
L+Q +
Sbjct: 62 LLQDT 66
>gi|254210302|gb|AAO73520.2| cellular nucleic acid-binding protein [Danio rerio]
Length = 163
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKV--GIVCYKCNNYGHFARECATESVTCY 60
ST +C+ C GH+ +CP RG + CY+C GH AR+C CY
Sbjct: 2 DMSTSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACY 61
Query: 61 NCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP-- 115
NC GH+++DC + CYNC +GH AR+C + + ++CY+C GH K C
Sbjct: 62 NCHRSGHISRDCKEPKKEREQCCYNCGKAGHVARDCDHANEQKCYSCGGFGHFQKLCDKV 121
Query: 116 -----GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
G+ + + + CY CG GHL+ DC +
Sbjct: 122 KCYRCGEIGHVAVQCSKATEVNCYNCGKTGHLARDCSI 159
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 27/127 (21%)
Query: 39 CYKCNNYGHFARECAT------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSS 86
C+ C GH+ + C + + CY C QGH+A+DC ++ CYNC+ S
Sbjct: 8 CFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCE-QTEDACYNCHRS 66
Query: 87 GHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLS 143
GH +R+C +R CY C +AGH+A++C K CY CG GH
Sbjct: 67 GHISRDCKEPKKEREQCCYNCGKAGHVARDCDHANEQK-----------CYSCGGFGHFQ 115
Query: 144 YDCKLVQ 150
C V+
Sbjct: 116 KLCDKVK 122
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH C + CY C +GHF + C + V CY C GHV
Sbjct: 84 CYNCGKAGHVARDCDHANEQK---------CYSCGGFGHFQKLC--DKVKCYRCGEIGHV 132
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
A C+ + + CYNC +GH AR+C ++S
Sbjct: 133 AVQCSKATEVNCYNCGKTGHLARDCSIEAS 162
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 23/88 (26%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR-----------CYACHQAGHMAKECPGQTAGKSPE 124
S+ C+ C SGH+ +NCPN R CY C + GH+A++C E
Sbjct: 4 STSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDC---------E 54
Query: 125 PVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
D CY C GH+S DCK +K
Sbjct: 55 QTED---ACYNCHRSGHISRDCKEPKKE 79
>gi|335772494|gb|AEH58085.1| cellular nucleic acid-binding protein-like protein, partial [Equus
caballus]
Length = 166
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 74/162 (45%), Gaps = 21/162 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADAR-----------GDKVGIVCYKCNNYGHFARECATES 56
+C+ C GH+ CP + +CY+C GH A++C +
Sbjct: 1 ECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQE 60
Query: 57 VTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKE 113
CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + GH+ K+
Sbjct: 61 DACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKD 120
Query: 114 CP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
C G+T + + CY CG GHL+ +C +
Sbjct: 121 CTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 162
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 59/136 (43%), Gaps = 36/136 (26%)
Query: 39 CYKCNNYGHFARECATESV---------------------TCYNCSGQGHVAKDCTVKSS 77
C+KC GH+AREC T CY C GH+AKDC ++
Sbjct: 2 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 61
Query: 78 IICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
CYNC GH A++C +R CY C + GH+A++C K CY
Sbjct: 62 A-CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK-----------CY 109
Query: 135 VCGHQGHLSYDCKLVQ 150
CG GH+ DC V+
Sbjct: 110 SCGEFGHIQKDCTKVK 125
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 107 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 154
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 155 HLARECTIEAT 165
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 9/54 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT 58
+ ++CY C + GH +C + S + CY+C GH AREC E+
Sbjct: 122 TKVKCYRCGETGHVAINCSKTSE---------VNCYRCGESGHLARECTIEATA 166
>gi|3661541|gb|AAC61751.1| poly-zinc finger protein 1 [Trypanosoma cruzi]
Length = 193
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 66/159 (41%), Gaps = 31/159 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------TCYNC 62
CYNC GH CP + G G CY C GH +REC T CYNC
Sbjct: 46 CYNCGQPGHLSRGCPTRPP----GAMGGRACYNCGQPGHPSRECPTRPPGAMGGRACYNC 101
Query: 63 SGQGHVAKDCTVKSS-----IICYNCNSSGHFARNCPNDSSK--------RCYACHQAGH 109
GH++++C + CY C GH +R CPN + CY C Q GH
Sbjct: 102 GQPGHLSRECPTRPPGTMGDRACYKCGRMGHLSRECPNRPAGGFRGVARGACYHCQQEGH 161
Query: 110 MAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+A++CP G CY CG GH S C +
Sbjct: 162 LARDCPNAPPGG--------ERACYNCGQTGHTSRACPV 192
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 69/155 (44%), Gaps = 23/155 (14%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------TCYNC 62
C+ C + GH+ CP A GD+ CY C GH +R C T CYNC
Sbjct: 20 CHRCGETGHFARECPNIPPG-AMGDRA---CYNCGQPGHLSRGCPTRPPGAMGGRACYNC 75
Query: 63 SGQGHVAKDCTVKSS-----IICYNCNSSGHFARNCPNDSS-----KRCYACHQAGHMAK 112
GH +++C + CYNC GH +R CP + CY C + GH+++
Sbjct: 76 GQPGHPSRECPTRPPGAMGGRACYNCGQPGHLSRECPTRPPGTMGDRACYKCGRMGHLSR 135
Query: 113 ECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
ECP + AG CY C +GHL+ DC
Sbjct: 136 ECPNRPAGGF---RGVARGACYHCQQEGHLARDCP 167
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 59/128 (46%), Gaps = 22/128 (17%)
Query: 36 GIVCYKCNNYGHFAREC------ATESVTCYNCSGQGHVAKDCTVK-----SSIICYNCN 84
G C++C GHFAREC A CYNC GH+++ C + CYNC
Sbjct: 17 GSTCHRCGETGHFARECPNIPPGAMGDRACYNCGQPGHLSRGCPTRPPGAMGGRACYNCG 76
Query: 85 SSGHFARNCPND-----SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
GH +R CP + CY C Q GH+++ECP + G CY CG
Sbjct: 77 QPGHPSRECPTRPPGAMGGRACYNCGQPGHLSRECPTRPPG------TMGDRACYKCGRM 130
Query: 140 GHLSYDCK 147
GHLS +C
Sbjct: 131 GHLSRECP 138
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----TCYNCSG 64
CY C GH CP + + RG G CY C GH AR+C CYNC
Sbjct: 124 CYKCGRMGHLSRECPNRPAGGFRGVARG-ACYHCQQEGHLARDCPNAPPGGERACYNCGQ 182
Query: 65 QGHVAKDCTVK 75
GH ++ C VK
Sbjct: 183 TGHTSRACPVK 193
>gi|50471|emb|CAA45345.1| cellular nucleic acid binding protein clone 6 [Mus musculus]
gi|50473|emb|CAA77896.1| cellular nucleic acid binding protein clone 6 [Mus musculus]
Length = 170
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 74/162 (45%), Gaps = 21/162 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADAR-----------GDKVGIVCYKCNNYGHFARECATES 56
+C+ C GH+ CP + +CY+C GH A++C +
Sbjct: 5 ECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQE 64
Query: 57 VTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKE 113
CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + GH+ K+
Sbjct: 65 DACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKD 124
Query: 114 CP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
C G+T + + CY CG GHL+ +C +
Sbjct: 125 CTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 166
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 59/136 (43%), Gaps = 36/136 (26%)
Query: 39 CYKCNNYGHFARECATESV---------------------TCYNCSGQGHVAKDCTVKSS 77
C+KC GH+AREC T CY C GH+AKDC ++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 78 IICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
CYNC GH A++C +R CY C + GH+A++C K CY
Sbjct: 66 A-CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK-----------CY 113
Query: 135 VCGHQGHLSYDCKLVQ 150
CG GH+ DC V+
Sbjct: 114 SCGEFGHIQKDCTKVK 129
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 111 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 158
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 159 HLARECTIEAT 169
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPE-------PVVDMSL--TCYVCGHQGHLSYDCKL 148
S C+ C ++GH A+ECP V SL CY CG GHL+ DC L
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDL 62
Query: 149 VQKS 152
+ +
Sbjct: 63 QEDA 66
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 9/54 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT 58
+ ++CY C + GH +C + S + CY+C GH AREC E+
Sbjct: 126 TKVKCYRCGETGHVAINCSKTSE---------VNCYRCGESGHLARECTIEATA 170
>gi|431913718|gb|ELK15208.1| Cellular nucleic acid-binding protein [Pteropus alecto]
Length = 189
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 28/174 (16%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADA-------------RG-----DKVGIVCYKCNN 44
+ S+ +C+ C GH+ CP RG + +CY+C
Sbjct: 12 AMSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGE 71
Query: 45 YGHFARECATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRC 101
GH A++C + CYNC GH+AKDC + CYNC GH AR+C + ++C
Sbjct: 72 SGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKC 131
Query: 102 YACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
Y+C + GH+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 132 YSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 185
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 130 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 177
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 178 HLARECTIEAT 188
>gi|85099515|ref|XP_960800.1| hypothetical protein NCU08933 [Neurospora crassa OR74A]
gi|28922325|gb|EAA31564.1| predicted protein [Neurospora crassa OR74A]
gi|28950135|emb|CAD70993.1| conserved hypothetical protein [Neurospora crassa]
Length = 449
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 72/151 (47%), Gaps = 18/151 (11%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TC 59
S +C NC + GH + SCP++ A +++ I C+ C GH R+C V C
Sbjct: 233 SRGIPKCGNCGELGHIRKSCPEEG---AEKEELVIKCFNCEEVGHRIRDCPIPRVDKFAC 289
Query: 60 YNCSGQGHVAKDCTVKSS---IICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECP 115
NC GH A DCT S + C CN GHF+++CP R C C Q GHMAKEC
Sbjct: 290 KNCGQSGHRASDCTEPRSAEGVECRKCNEMGHFSKDCPQGGGPRGCRNCGQEGHMAKEC- 348
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
EP ++ C C GH S +C
Sbjct: 349 -------TEPKNMDNVQCRNCDEFGHFSKEC 372
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT-- 58
+ C NC GH C + SA+ G+ C KCN GHF+++C
Sbjct: 281 IPRVDKFACKNCGQSGHRASDCTEPRSAE------GVECRKCNEMGHFSKDCPQGGGPRG 334
Query: 59 CYNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCP---NDSSKRCYACHQAGHMAK 112
C NC +GH+AK+CT ++ C NC+ GHF++ CP + + +C C Q GH
Sbjct: 335 CRNCGQEGHMAKECTEPKNMDNVQCRNCDEFGHFSKECPKPRDITRVKCSNCQQMGHYKS 394
Query: 113 ECPGQTAGKSPEPVVD 128
+CP + P D
Sbjct: 395 KCPNPLVDEDAAPSFD 410
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 38 VCYKCNNYGHFARECA-TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
C++CN GH+AREC ++TC C HV KDC +S C NC GH C
Sbjct: 51 ACHRCNEEGHYARECPNAPAMTCRECDSPDHVVKDCPERS---CKNCGEKGHTIAKC 104
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 14/71 (19%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
C+ CN GH+AR CPN + C C H+ K+CP +C CG +
Sbjct: 52 CHRCNEEGHYARECPNAPAMTCRECDSPDHVVKDCP--------------ERSCKNCGEK 97
Query: 140 GHLSYDCKLVQ 150
GH C+ +
Sbjct: 98 GHTIAKCEAAR 108
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
C+ C+ +GH A++C ++ C C+S H ++CP S C C + GH +C
Sbjct: 51 ACHRCNEEGHYARECPNAPAMTCRECDSPDHVVKDCPERS---CKNCGEKGHTIAKCEAA 107
Query: 118 TA 119
A
Sbjct: 108 RA 109
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 11/70 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+ C + GHY CP + + C +C++ H ++C S C NC +GH
Sbjct: 52 CHRCNEEGHYARECPNAPA---------MTCRECDSPDHVVKDCPERS--CKNCGEKGHT 100
Query: 69 AKDCTVKSSI 78
C +I
Sbjct: 101 IAKCEAARAI 110
>gi|400621674|gb|AFP87471.1| vasa-like protein, partial [Nematostella vectensis]
Length = 906
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 23/152 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE-----SVTCYNCS 63
C+ C GH+ CP + G C+KC GHFAREC + + C+ C
Sbjct: 171 CHRCGQEGHFSRDCPNPPTRQGNGR----ACHKCGEEGHFARECPNQPSQGGARACHKCG 226
Query: 64 GQGHVAKDCTVKSS----IICYNCNSSGHFARNCPNDSSK-----RCYACHQAGHMAKEC 114
+GH A++C + S C+ C GHFAR CPN S+ C+ C + GH A++C
Sbjct: 227 EEGHFARECPNQPSQGGGRACHKCGEEGHFARECPNQPSQGGWCLTCHKCREEGHYARDC 286
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
P Q P + C+ CG +GH S +C
Sbjct: 287 PNQ-----PSQGMGGGGACHKCGKEGHFSREC 313
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 77/183 (42%), Gaps = 56/183 (30%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES------VTCYNC 62
C+ C + GH+ CP + S G C+KC GHFAREC + +TC+ C
Sbjct: 222 CHKCGEEGHFARECPNQPSQGG-----GRACHKCGEEGHFARECPNQPSQGGWCLTCHKC 276
Query: 63 SGQGHVAKDCTVKSS---------------------------------IICYNCNSSGHF 89
+GH A+DC + S C+ C GHF
Sbjct: 277 REEGHYARDCPNQPSQGMGGGGACHKCGKEGHFSRECPNQDSQRIGGGRNCHKCGQEGHF 336
Query: 90 ARNCPNDSSK---RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+R CPN +S+ C+ C + GH A+ECP G+ S TC+ CG GH S +C
Sbjct: 337 SRECPNQTSQGSGTCHKCGEVGHFARECP---TGRG------QSDTCHKCGETGHYSREC 387
Query: 147 KLV 149
+
Sbjct: 388 PTL 390
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 19/137 (13%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES-------VTC 59
+ C+ C + GHY CP + S G G C+KC GHF+REC + C
Sbjct: 271 LTCHKCREEGHYARDCPNQPSQGMGG---GGACHKCGKEGHFSRECPNQDSQRIGGGRNC 327
Query: 60 YNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCP--NDSSKRCYACHQAGHMAKEC 114
+ C +GH +++C T + S C+ C GHFAR CP S C+ C + GH ++EC
Sbjct: 328 HKCGQEGHFSRECPNQTSQGSGTCHKCGEVGHFARECPTGRGQSDTCHKCGETGHYSREC 387
Query: 115 P----GQTAGKSPEPVV 127
P G P P+
Sbjct: 388 PTLGNGGLDPNRPPPIT 404
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 65/136 (47%), Gaps = 21/136 (15%)
Query: 26 SSADARGDKVGI-VCYKCNNYGHFARECATESV------TCYNCSGQGHVAKDCTVKSS- 77
S R D+ G C++C GHF+R+C C+ C +GH A++C + S
Sbjct: 157 SGTTGRSDRGGGGACHRCGQEGHFSRDCPNPPTRQGNGRACHKCGEEGHFARECPNQPSQ 216
Query: 78 ---IICYNCNSSGHFARNCPNDSS----KRCYACHQAGHMAKECPGQTAGKSPEPVVDMS 130
C+ C GHFAR CPN S + C+ C + GH A+ECP Q +
Sbjct: 217 GGARACHKCGEEGHFARECPNQPSQGGGRACHKCGEEGHFARECPNQPSQGG------WC 270
Query: 131 LTCYVCGHQGHLSYDC 146
LTC+ C +GH + DC
Sbjct: 271 LTCHKCREEGHYARDC 286
>gi|170583718|ref|XP_001896707.1| Zinc knuckle family protein [Brugia malayi]
gi|158596020|gb|EDP34440.1| Zinc knuckle family protein [Brugia malayi]
gi|402582762|gb|EJW76707.1| zinc knuckle family protein [Wuchereria bancrofti]
Length = 147
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 70/143 (48%), Gaps = 30/143 (20%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCP-QKSSADARGDKVGIVCYKCNNYGHFARECATESV-- 57
MS+ +CY C + GH+ +CP Q A RG G C+ C GHFAREC +
Sbjct: 1 MSNNDPERCYKCNEKGHFARNCPTQIQEAGRRG--AGGDCFNCGQSGHFARECPNQRGGG 58
Query: 58 --------------TCYNCSGQGHVAKDCTVKSSI--------ICYNCNSSGHFARNCPN 95
CY C G GH A++C + + CYNC GH +R+CP+
Sbjct: 59 RYYGGRGGGRSGQSECYQCGGFGHFARECPTERRVGAAGGGNQKCYNCGRFGHISRDCPD 118
Query: 96 ---DSSKRCYACHQAGHMAKECP 115
D SKRCY C Q GH+++ECP
Sbjct: 119 SGSDQSKRCYNCQQIGHISRECP 141
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Query: 80 CYNCNSSGHFARNCP---NDSSKR-----CYACHQAGHMAKECPG----QTAGKSPEPVV 127
CY CN GHFARNCP ++ +R C+ C Q+GH A+ECP
Sbjct: 9 CYKCNEKGHFARNCPTQIQEAGRRGAGGDCFNCGQSGHFARECPNQRGGGRYYGGRGGGR 68
Query: 128 DMSLTCYVCGHQGHLSYDCKLVQK 151
CY CG GH + +C ++
Sbjct: 69 SGQSECYQCGGFGHFARECPTERR 92
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 95 NDSSKRCYACHQAGHMAKECPGQT--AGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
N+ +RCY C++ GH A+ CP Q AG+ C+ CG GH + +C
Sbjct: 3 NNDPERCYKCNEKGHFARNCPTQIQEAGRR-----GAGGDCFNCGQSGHFAREC 51
>gi|410899915|ref|XP_003963442.1| PREDICTED: cellular nucleic acid-binding protein-like [Takifugu
rubripes]
Length = 167
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 15/163 (9%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGI-----VCYKCNNYGHFARECATE 55
M +C+ C GH+ CP+ S RG + CY+C +GH AR+C
Sbjct: 1 MDLGGNNECFGCGRTGHWIKDCPKSSGPRGRGPRGRGRVKEQFCYRCGEHGHIARDCDQP 60
Query: 56 SVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAK 112
+CYNC GH+++DC + +CYNC +GH AR+C + + ++CY+C + GH+ K
Sbjct: 61 EDSCYNCHKSGHISRDCKEPKREREHLCYNCGKAGHVARDCEHANEQKCYSCGEFGHIQK 120
Query: 113 ECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
C G+ + + CY CG GH++ DC +
Sbjct: 121 LCDKVKCYRCGEIGHVAVQCSKASETNCYNCGKAGHVARDCTI 163
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 58/130 (44%), Gaps = 30/130 (23%)
Query: 39 CYKCNNYGHFARECATESVT---------------CYNCSGQGHVAKDCTVKSSIICYNC 83
C+ C GH+ ++C S CY C GH+A+DC + CYNC
Sbjct: 9 CFGCGRTGHWIKDCPKSSGPRGRGPRGRGRVKEQFCYRCGEHGHIARDCD-QPEDSCYNC 67
Query: 84 NSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQG 140
+ SGH +R+C +R CY C +AGH+A++C K CY CG G
Sbjct: 68 HKSGHISRDCKEPKREREHLCYNCGKAGHVARDCEHANEQK-----------CYSCGEFG 116
Query: 141 HLSYDCKLVQ 150
H+ C V+
Sbjct: 117 HIQKLCDKVK 126
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH C + CY C +GH + C + V CY C GHV
Sbjct: 88 CYNCGKAGHVARDCEHANEQK---------CYSCGEFGHIQKLC--DKVKCYRCGEIGHV 136
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
A C+ S CYNC +GH AR+C ++S
Sbjct: 137 AVQCSKASETNCYNCGKAGHVARDCTIEAS 166
>gi|326927837|ref|XP_003210095.1| PREDICTED: cellular nucleic acid-binding protein-like [Meleagris
gallopavo]
Length = 149
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 28/158 (17%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR-----------GDKVGIVCYKCNNYGHFARECA 53
S+ +C+ C GH+ CP + +CY+C GH A++C
Sbjct: 2 SSNECFKCGRTGHWARECPTGIGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDCD 61
Query: 54 TESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
+ CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + GH+
Sbjct: 62 LQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHI 121
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
K+C + CY CG GHL+ +C +
Sbjct: 122 QKDC--------------TKVKCYRCGESGHLARECTI 145
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 59/136 (43%), Gaps = 36/136 (26%)
Query: 39 CYKCNNYGHFARECATESV---------------------TCYNCSGQGHVAKDCTVKSS 77
C+KC GH+AREC T CY C GH+AKDC ++
Sbjct: 6 CFKCGRTGHWARECPTGIGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 78 IICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
CYNC GH A++C +R CY C + GH+A++C K CY
Sbjct: 66 A-CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK-----------CY 113
Query: 135 VCGHQGHLSYDCKLVQ 150
CG GH+ DC V+
Sbjct: 114 SCGEFGHIQKDCTKVK 129
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH C AD + CY C +GH ++C V CY C GH+
Sbjct: 91 CYNCGKPGHLARDCDH---ADEQ------KCYSCGEFGHIQKDCT--KVKCYRCGESGHL 139
Query: 69 AKDCTVKSS 77
A++CT++++
Sbjct: 140 ARECTIEAT 148
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 12/51 (23%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT 58
+CY+C +FGH Q C + + CY+C GH AREC E+
Sbjct: 111 KCYSCGEFGHIQKDCTK------------VKCYRCGESGHLARECTIEATA 149
>gi|410293500|gb|JAA25350.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
Length = 176
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 27/171 (15%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADA------------RG-----DKVGIVCYKCNNYGH 47
S+ +C+ C GH+ CP RG + +CY+C GH
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 61
Query: 48 FARECATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYAC 104
A++C + CYNC GH+AKDC + CYNC GH AR+C + ++CY+C
Sbjct: 62 LAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSC 121
Query: 105 HQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+ GH+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 GEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 172
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 117 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 164
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 165 HLARECTIEAT 175
>gi|383421411|gb|AFH33919.1| cellular nucleic acid-binding protein isoform 3 [Macaca mulatta]
gi|410221754|gb|JAA08096.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
Length = 176
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 27/171 (15%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADA------------RG-----DKVGIVCYKCNNYGH 47
S+ +C+ C GH+ CP RG + +CY+C GH
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFTSDRGFQFVSSSLPDICYRCGESGH 61
Query: 48 FARECATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYAC 104
A++C + CYNC GH+AKDC + CYNC GH AR+C + ++CY+C
Sbjct: 62 LAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSC 121
Query: 105 HQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+ GH+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 GEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 172
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 117 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 164
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 165 HLARECTIEAT 175
>gi|354622939|ref|NP_001133217.2| zinc finger protein 9 [Salmo salar]
gi|221220712|gb|ACM09017.1| Cellular nucleic acid-binding protein [Salmo salar]
Length = 167
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKV-----GIVCYKCNNYGHFARECATE 55
M +S+ +C+ C GH+ +CP+ S + + CY+C GH AR+C
Sbjct: 1 MEMSSSSECFRCGRPGHWIKNCPEAGSGGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQT 60
Query: 56 SVTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAK 112
CYNC GH+++DC + CY+C +GH AR+C + + ++CY+C GH+ K
Sbjct: 61 EDACYNCHRSGHISRDCKEPKKEREQCCYSCGKAGHVARDCDHANEQKCYSCGGFGHIQK 120
Query: 113 ECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
C G+ + + + CY CG+ GHL+ +C +
Sbjct: 121 LCDKVKCYRCGEIGHVAVQCSKASEVNCYKCGNTGHLAKECTI 163
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES-VTCYNCSGQG 66
+CY+C FGH Q C + + CY+C GH A +C+ S V CY C G
Sbjct: 108 KCYSCGGFGHIQKLCDK------------VKCYRCGEIGHVAVQCSKASEVNCYKCGNTG 155
Query: 67 HVAKDCTVKSS 77
H+AK+CT++++
Sbjct: 156 HLAKECTIEAT 166
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 26/93 (27%)
Query: 74 VKSSIICYNCNSSGHFARNCPNDSSKR--------------CYACHQAGHMAKECPGQTA 119
+ SS C+ C GH+ +NCP S CY C + GH+A++C
Sbjct: 3 MSSSSECFRCGRPGHWIKNCPEAGSGGRGRGRGRGRGKDLFCYRCGEQGHIARDC----- 57
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
E D CY C GH+S DCK +K
Sbjct: 58 ----EQTED---ACYNCHRSGHISRDCKEPKKE 83
>gi|393906109|gb|EJD74179.1| hypothetical protein LOAG_18462 [Loa loa]
Length = 145
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 71/141 (50%), Gaps = 28/141 (19%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCP-QKSSADARGDKVGIVCYKCNNYGHFARECATESV-- 57
MS+ + +CY C + GH+ +CP Q A RG G C+ C GHFAREC +
Sbjct: 1 MSNNDSDRCYKCNEKGHFARNCPTQIQEAVRRGG--GGDCFNCGQSGHFARECPNQRGGG 58
Query: 58 --------------TCYNCSGQGHVAKDCTVKSSI------ICYNCNSSGHFARNCPN-- 95
CY C G GH A++C + + CYNC GH +R+CP+
Sbjct: 59 RYYGGRGGGRSGQSECYQCGGFGHFARECPTERRVGGGGSQKCYNCGRFGHISRDCPDFG 118
Query: 96 -DSSKRCYACHQAGHMAKECP 115
D SKRCY C Q GH+++ECP
Sbjct: 119 SDQSKRCYNCQQIGHISRECP 139
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 50/123 (40%), Gaps = 32/123 (26%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
CYKCN GHFAR C T+ G G C+NC SGHFAR CPN
Sbjct: 9 CYKCNEKGHFARNCPTQIQEAVRRGGGGD------------CFNCGQSGHFARECPNQRG 56
Query: 99 K---------------RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLS 143
CY C GH A+ECP + S CY CG GH+S
Sbjct: 57 GGRYYGGRGGGRSGQSECYQCGGFGHFARECPTER-----RVGGGGSQKCYNCGRFGHIS 111
Query: 144 YDC 146
DC
Sbjct: 112 RDC 114
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 95 NDSSKRCYACHQAGHMAKECPGQTAGKSPEPV-VDMSLTCYVCGHQGHLSYDC 146
N+ S RCY C++ GH A+ CP Q E V C+ CG GH + +C
Sbjct: 3 NNDSDRCYKCNEKGHFARNCPTQIQ----EAVRRGGGGDCFNCGQSGHFAREC 51
>gi|410988851|ref|XP_004000690.1| PREDICTED: cellular nucleic acid-binding protein-like [Felis catus]
Length = 171
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 22/164 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGI------------VCYKCNNYGHFAREC 52
S +C+ C GH+ CP+ + G + + +CY+C GH A+ C
Sbjct: 2 SNKECFKCGRSGHWARGCPRGGGSQGHGARGRVRGSQCSSTNPSDICYRCGESGHHAKNC 61
Query: 53 ATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
CYNC GH+AKDC + CY C GH AR+C ++CY+C + GH
Sbjct: 62 DLLEDICYNCGRSGHIAKDCIEPKREREQCCYTCGRPGHLARDCDRQEEQKCYSCGEYGH 121
Query: 110 MAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ K+C G+ + + CY CG GHL+ +C
Sbjct: 122 IQKDCTQVKCYRCGEIGHMAINCSKTSEVNCYRCGESGHLAREC 165
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGH 67
CYNC GH C + + CY C GH AR+C E CY+C GH
Sbjct: 68 CYNCGRSGHIAKDCIEPKREREQ------CCYTCGRPGHLARDCDRQEEQKCYSCGEYGH 121
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
+ KDCT + CY C GH A NC S CY C ++GH+A+ECP
Sbjct: 122 IQKDCT---QVKCYRCGEIGHMAINCSKTSEVNCYRCGESGHLARECP 166
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CY C GH C ++ CY C YGH ++C V CY C GH+
Sbjct: 92 CYTCGRPGHLARDCDRQEEQK---------CYSCGEYGHIQKDCT--QVKCYRCGEIGHM 140
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
A +C+ S + CY C SGH AR CP +++
Sbjct: 141 AINCSKTSEVNCYRCGESGHLARECPTEAT 170
>gi|54696090|gb|AAV38417.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein) [synthetic construct]
gi|61368820|gb|AAX43242.1| zinc finger protein 9 [synthetic construct]
Length = 178
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 78/172 (45%), Gaps = 28/172 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADA-------------RG-----DKVGIVCYKCNNYG 46
S+ +C+ C GH+ CP RG + +CY+C G
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESG 61
Query: 47 HFARECATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYA 103
H A++C + CYNC GH+AKDC + CYNC GH AR+C + ++CY+
Sbjct: 62 HLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYS 121
Query: 104 CHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
C + GH+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 CGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 173
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 13/73 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 118 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 165
Query: 67 HVAKDCTVKSSII 79
H+A++CT++++ +
Sbjct: 166 HLARECTIEATAL 178
>gi|4827071|ref|NP_003409.1| cellular nucleic acid-binding protein isoform 3 [Homo sapiens]
gi|12018264|ref|NP_072120.1| cellular nucleic acid-binding protein [Rattus norvegicus]
gi|197099834|ref|NP_001126703.1| cellular nucleic acid-binding protein [Pongo abelii]
gi|356582433|ref|NP_001239193.1| cellular nucleic acid-binding protein isoform 1 [Canis lupus
familiaris]
gi|301764545|ref|XP_002917687.1| PREDICTED: cellular nucleic acid-binding protein-like [Ailuropoda
melanoleuca]
gi|332261811|ref|XP_003279960.1| PREDICTED: cellular nucleic acid-binding protein isoform 4
[Nomascus leucogenys]
gi|332817849|ref|XP_516737.3| PREDICTED: uncharacterized protein LOC460682 isoform 4 [Pan
troglodytes]
gi|338714528|ref|XP_003363101.1| PREDICTED: cellular nucleic acid-binding protein-like [Equus
caballus]
gi|344275961|ref|XP_003409779.1| PREDICTED: cellular nucleic acid-binding protein-like [Loxodonta
africana]
gi|348553985|ref|XP_003462806.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 1
[Cavia porcellus]
gi|354482847|ref|XP_003503607.1| PREDICTED: cellular nucleic acid-binding protein isoform 1
[Cricetulus griseus]
gi|390475369|ref|XP_002758716.2| PREDICTED: cellular nucleic acid-binding protein isoform 1
[Callithrix jacchus]
gi|397518580|ref|XP_003829462.1| PREDICTED: cellular nucleic acid-binding protein isoform 1 [Pan
paniscus]
gi|402887087|ref|XP_003906936.1| PREDICTED: cellular nucleic acid-binding protein [Papio anubis]
gi|403268271|ref|XP_003926201.1| PREDICTED: cellular nucleic acid-binding protein [Saimiri
boliviensis boliviensis]
gi|410037468|ref|XP_003950232.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410037472|ref|XP_003950234.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410037479|ref|XP_003950237.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410951814|ref|XP_003982588.1| PREDICTED: cellular nucleic acid-binding protein isoform 1 [Felis
catus]
gi|426342036|ref|XP_004036322.1| PREDICTED: cellular nucleic acid-binding protein isoform 1 [Gorilla
gorilla gorilla]
gi|426342040|ref|XP_004036324.1| PREDICTED: cellular nucleic acid-binding protein isoform 3 [Gorilla
gorilla gorilla]
gi|426342042|ref|XP_004036325.1| PREDICTED: cellular nucleic acid-binding protein isoform 4 [Gorilla
gorilla gorilla]
gi|426342044|ref|XP_004036326.1| PREDICTED: cellular nucleic acid-binding protein isoform 5 [Gorilla
gorilla gorilla]
gi|441665181|ref|XP_004091798.1| PREDICTED: cellular nucleic acid-binding protein [Nomascus
leucogenys]
gi|441665186|ref|XP_004091799.1| PREDICTED: cellular nucleic acid-binding protein [Nomascus
leucogenys]
gi|50401851|sp|P62634.1|CNBP_RAT RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|50401852|sp|P62633.1|CNBP_HUMAN RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|75054771|sp|Q5R5R5.1|CNBP_PONAB RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|8650478|gb|AAF78224.1|AF242550_1 cellular nucleic acid binding protein [Rattus norvegicus]
gi|643576|gb|AAA61975.1| SRE-binding protein [Homo sapiens]
gi|790571|gb|AAA91782.1| nucleic acid binding protein [Homo sapiens]
gi|809511|dbj|BAA08212.1| Cellular Nucleic Acid Binding Protein [Rattus norvegicus]
gi|26344578|dbj|BAC35938.1| unnamed protein product [Mus musculus]
gi|38328236|gb|AAH62225.1| CCHC-type zinc finger, nucleic acid binding protein [Rattus
norvegicus]
gi|40738013|gb|AAR89462.1| zinc finger protein 9 [Homo sapiens]
gi|40738017|gb|AAR89464.1| cellular nucleic acid binding protein [Rattus norvegicus]
gi|55732400|emb|CAH92901.1| hypothetical protein [Pongo abelii]
gi|62205335|gb|AAH93058.1| CCHC-type zinc finger, nucleic acid binding protein [Homo sapiens]
gi|67970964|dbj|BAE01824.1| unnamed protein product [Macaca fascicularis]
gi|71891589|dbj|BAE16993.1| cellular nucleic acid binding protein [Rattus norvegicus]
gi|71891591|dbj|BAE16994.1| cellular nucleic acid binding protein [Rattus norvegicus]
gi|74144600|dbj|BAE27288.1| unnamed protein product [Mus musculus]
gi|74191437|dbj|BAE30298.1| unnamed protein product [Mus musculus]
gi|74195828|dbj|BAE30476.1| unnamed protein product [Mus musculus]
gi|74211374|dbj|BAE26440.1| unnamed protein product [Mus musculus]
gi|74226682|dbj|BAE26992.1| unnamed protein product [Mus musculus]
gi|74226907|dbj|BAE27097.1| unnamed protein product [Mus musculus]
gi|74226950|dbj|BAE27117.1| unnamed protein product [Mus musculus]
gi|90084990|dbj|BAE91236.1| unnamed protein product [Macaca fascicularis]
gi|119599679|gb|EAW79273.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_c [Homo sapiens]
gi|119599683|gb|EAW79277.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_c [Homo sapiens]
gi|148666812|gb|EDK99228.1| cellular nucleic acid binding protein, isoform CRA_a [Mus musculus]
gi|149036676|gb|EDL91294.1| cellular nucleic acid binding protein 1, isoform CRA_b [Rattus
norvegicus]
gi|189067296|dbj|BAG37006.1| unnamed protein product [Homo sapiens]
gi|208965940|dbj|BAG72984.1| CCHC-type zinc finger, nucleic acid binding protein [synthetic
construct]
gi|281347013|gb|EFB22597.1| hypothetical protein PANDA_006035 [Ailuropoda melanoleuca]
gi|344253372|gb|EGW09476.1| Cellular nucleic acid-binding protein [Cricetulus griseus]
gi|351695335|gb|EHA98253.1| Cellular nucleic acid-binding protein [Heterocephalus glaber]
gi|387543018|gb|AFJ72136.1| cellular nucleic acid-binding protein isoform 3 [Macaca mulatta]
gi|410253690|gb|JAA14812.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
gi|440895043|gb|ELR47334.1| Cellular nucleic acid-binding protein [Bos grunniens mutus]
gi|444512840|gb|ELV10182.1| Cellular nucleic acid-binding protein [Tupaia chinensis]
Length = 177
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 78/172 (45%), Gaps = 28/172 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADA-------------RG-----DKVGIVCYKCNNYG 46
S+ +C+ C GH+ CP RG + +CY+C G
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESG 61
Query: 47 HFARECATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYA 103
H A++C + CYNC GH+AKDC + CYNC GH AR+C + ++CY+
Sbjct: 62 HLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYS 121
Query: 104 CHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
C + GH+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 CGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 173
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 118 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 165
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 166 HLARECTIEAT 176
>gi|58802483|gb|AAW82446.1| cellular nucleic acid-binding protein [Carassius gibelio]
Length = 163
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKV--GIVCYKCNNYGHFARECATESVTCYNC 62
ST +C+ C GH+ +CP RG + CY+C GH AR+C CYNC
Sbjct: 4 STSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACYNC 63
Query: 63 SGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP---- 115
GH+++DC + CYNC +GH AR+C + + ++CY+C GH+ K C
Sbjct: 64 HRSGHISRDCKEPKKEREQSCYNCGKAGHVARDCDHGNEQKCYSCGGFGHIQKLCDKVKC 123
Query: 116 ---GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
G+ + + + CY CG GHL+ +C +
Sbjct: 124 YRCGEIGHVAVQCSKATEVNCYNCGKTGHLARECTI 159
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 27/127 (21%)
Query: 39 CYKCNNYGHFARECAT------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSS 86
C+ C GH+ + C + + CY C QGH+A+DC ++ CYNC+ S
Sbjct: 8 CFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCE-QTEDACYNCHRS 66
Query: 87 GHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLS 143
GH +R+C +R CY C +AGH+A++C K CY CG GH+
Sbjct: 67 GHISRDCKEPKKEREQSCYNCGKAGHVARDCDHGNEQK-----------CYSCGGFGHIQ 115
Query: 144 YDCKLVQ 150
C V+
Sbjct: 116 KLCDKVK 122
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH C + CY C +GH + C + V CY C GHV
Sbjct: 84 CYNCGKAGHVARDCDHGNEQK---------CYSCGGFGHIQKLC--DKVKCYRCGEIGHV 132
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
A C+ + + CYNC +GH AR C ++S
Sbjct: 133 AVQCSKATEVNCYNCGKTGHLARECTIEAS 162
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 23/88 (26%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR-----------CYACHQAGHMAKECPGQTAGKSPE 124
S+ C+ C SGH+ +NCPN R CY C + GH+A++C E
Sbjct: 4 STSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDC---------E 54
Query: 125 PVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
D CY C GH+S DCK +K
Sbjct: 55 QTED---ACYNCHRSGHISRDCKEPKKE 79
>gi|115483228|ref|NP_001065207.1| Os10g0545300 [Oryza sativa Japonica Group]
gi|13357253|gb|AAK20050.1|AC025783_10 putative zinc finger protein [Oryza sativa Japonica Group]
gi|31433361|gb|AAP54880.1| Zinc knuckle family protein, expressed [Oryza sativa Japonica
Group]
gi|113639816|dbj|BAF27121.1| Os10g0545300 [Oryza sativa Japonica Group]
gi|125575582|gb|EAZ16866.1| hypothetical protein OsJ_32342 [Oryza sativa Japonica Group]
gi|215694396|dbj|BAG89389.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768319|dbj|BAH00548.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 247
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 73/154 (47%), Gaps = 26/154 (16%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------ESV 57
+S C+NC + GH SCP + +C C GH AREC+ E
Sbjct: 74 SSKDLCWNCKEPGHMANSCPNEG-----------ICRNCGKSGHIARECSAPPMLPGEMR 122
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP-- 115
C NC GH+A +CT + + C NC SGH ARNCPN+ C C+ +GH+A+ECP
Sbjct: 123 LCSNCYKPGHLAAECTNEKA--CNNCRKSGHLARNCPNEPV--CNLCNVSGHLARECPKS 178
Query: 116 ---GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ G P + C C GH+S DC
Sbjct: 179 DAINERGGPPPFRGGYSDVVCRACNQVGHMSRDC 212
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 68/151 (45%), Gaps = 29/151 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGI--------VCYKCNNYGHFARECATESVTCY 60
C NC GH+ CP + A G I +C+ C GH A C E + C
Sbjct: 41 CNNCKRPGHFARDCPNVALCHACGLPGHIAAECSSKDLCWNCKEPGHMANSCPNEGI-CR 99
Query: 61 NCSGQGHVAKDCTVKSSI-----ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
NC GH+A++C+ + +C NC GH A C N+ K C C ++GH+A+ CP
Sbjct: 100 NCGKSGHIARECSAPPMLPGEMRLCSNCYKPGHLAAECTNE--KACNNCRKSGHLARNCP 157
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
EPV C +C GHL+ +C
Sbjct: 158 N-------EPV------CNLCNVSGHLAREC 175
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 11/109 (10%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
+C C GHFAR+C ++ C+ C GH+A +C+ K +C+NC GH A +CPN+
Sbjct: 40 LCNNCKRPGHFARDCPNVAL-CHACGLPGHIAAECSSKD--LCWNCKEPGHMANSCPNEG 96
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C C ++GH+A+EC +P + C C GHL+ +C
Sbjct: 97 I--CRNCGKSGHIAREC------SAPPMLPGEMRLCSNCYKPGHLAAEC 137
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 56/140 (40%), Gaps = 29/140 (20%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
M C NC+ GH C + + C C GH AR C E V C
Sbjct: 116 MLPGEMRLCSNCYKPGHLAAECTNEKA-----------CNNCRKSGHLARNCPNEPV-CN 163
Query: 61 NCSGQGHVAKDCTVK----------------SSIICYNCNSSGHFARNCPNDSSKRCYAC 104
C+ GH+A++C S ++C CN GH +R+C + C+ C
Sbjct: 164 LCNVSGHLARECPKSDAINERGGPPPFRGGYSDVVCRACNQVGHMSRDCMAGAFMICHNC 223
Query: 105 HQAGHMAKECP-GQTAGKSP 123
GHMA ECP G+ + P
Sbjct: 224 GGRGHMAYECPSGRLMDRFP 243
>gi|198428176|ref|XP_002131221.1| PREDICTED: similar to universal minicircle sequence binding protein
(UMSBP), putative isoform 1 [Ciona intestinalis]
Length = 299
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 73/160 (45%), Gaps = 38/160 (23%)
Query: 9 CYNCFDFGHYQYSCPQ------KSSADAR--GDKVGIVCYKCNNYGHFARECATESVTCY 60
CY C GH+ CP + + D R G + C++C GH AR+C + CY
Sbjct: 112 CYKCGTPGHFARECPNDAADGIQRNEDRRPMGRRNNDYCFRCGQPGHMARDCLSAENACY 171
Query: 61 NCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS--------------SKRCYACHQ 106
NC +GH+A+DC ++ CY C +GH AR CP D+ +K+CY C
Sbjct: 172 NCYKEGHLARDCPEDNA--CYKCGKAGHLARKCPEDADRNGDARLNRREAGTKQCYLCQN 229
Query: 107 AGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GH+ CP TCY C +GH++ DC
Sbjct: 230 VGHIQANCP--------------EATCYRCHGEGHIARDC 255
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 26/135 (19%)
Query: 34 KVGIVCYKCNNYGHFARECATESVT------------------CYNCSGQGHVAKDCTVK 75
+ VCYKC GHFAREC ++ C+ C GH+A+DC +
Sbjct: 107 RDADVCYKCGTPGHFARECPNDAADGIQRNEDRRPMGRRNNDYCFRCGQPGHMARDC-LS 165
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDM----SL 131
+ CYNC GH AR+CP D++ CY C +AGH+A++CP + A ++ + ++ +
Sbjct: 166 AENACYNCYKEGHLARDCPEDNA--CYKCGKAGHLARKCP-EDADRNGDARLNRREAGTK 222
Query: 132 TCYVCGHQGHLSYDC 146
CY+C + GH+ +C
Sbjct: 223 QCYLCQNVGHIQANC 237
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 57/128 (44%), Gaps = 30/128 (23%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE------------- 55
CYNC+ GH CP+ + CYKC GH AR+C +
Sbjct: 170 CYNCYKEGHLARDCPEDN-----------ACYKCGKAGHLARKCPEDADRNGDARLNRRE 218
Query: 56 --SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKE 113
+ CY C GH+ +C CY C+ GH AR+CPN ++ CY C + GH A++
Sbjct: 219 AGTKQCYLCQNVGHIQANCP---EATCYRCHGEGHIARDCPN-GNEECYNCRRPGHKARD 274
Query: 114 CPGQTAGK 121
C G+
Sbjct: 275 CDEPRPGE 282
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 12/70 (17%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
T QCY C + GH Q +CP+ CY+C+ GH AR+C + CYNC
Sbjct: 218 EAGTKQCYLCQNVGHIQANCPE------------ATCYRCHGEGHIARDCPNGNEECYNC 265
Query: 63 SGQGHVAKDC 72
GH A+DC
Sbjct: 266 RRPGHKARDC 275
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 41/120 (34%), Gaps = 49/120 (40%)
Query: 76 SSIICYNCNSSGHFARNCPN-DSSKR---------------------------------- 100
S+ C+ C+ SGH+AR CP D +R
Sbjct: 44 SNDNCFICDKSGHWARECPESDEQQREYAPRTRGGFRGRGRGRGRGRGSYGGYGGYGGYG 103
Query: 101 --------CYACHQAGHMAKECPGQTAG--KSPEPVVDMSLT----CYVCGHQGHLSYDC 146
CY C GH A+ECP A + E M C+ CG GH++ DC
Sbjct: 104 TRQRDADVCYKCGTPGHFARECPNDAADGIQRNEDRRPMGRRNNDYCFRCGQPGHMARDC 163
>gi|291409840|ref|XP_002721202.1| PREDICTED: cellular nucleic acid binding protein-like isoform 1
[Oryctolagus cuniculus]
Length = 168
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 76/163 (46%), Gaps = 19/163 (11%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGI--------VCYKCNNYGHFAREC-ATE 55
S+ +C+ C GH+ CP G +CY+C GH A++C E
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCDLQE 61
Query: 56 SVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAK 112
CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + GH+ K
Sbjct: 62 DEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQK 121
Query: 113 ECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+C G+T + + CY CG GHL+ +C +
Sbjct: 122 DCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 164
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 32/133 (24%)
Query: 39 CYKCNNYGHFARECAT------------------ESVTCYNCSGQGHVAKDCTVKSSIIC 80
C+KC GH+AREC T + CY C GH+AKDC ++ C
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCDLQEDEAC 65
Query: 81 YNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCG 137
YNC GH A++C +R CY C + GH+A++C K CY CG
Sbjct: 66 YNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK-----------CYSCG 114
Query: 138 HQGHLSYDCKLVQ 150
GH+ DC V+
Sbjct: 115 EFGHIQKDCTKVK 127
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 109 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 156
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 157 HLARECTIEAT 167
>gi|89269563|emb|CAJ82604.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein) [Xenopus (Silurana) tropicalis]
gi|115292111|gb|AAI22021.1| cnbp protein [Xenopus (Silurana) tropicalis]
Length = 177
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 28/172 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR------------------GDKVGIVCYKCNNYG 46
S+ +C+ C GH+ CP + +CY+C G
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGRGRGRGGFSSSRGFQFISSSLPDICYRCGESG 61
Query: 47 HFARECATESVTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYA 103
H A++C + CYNC GH+AKDC + CYNC GH AR+C + ++CY+
Sbjct: 62 HLAKDCDLQEDACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDCDHADEQKCYS 121
Query: 104 CHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
C + GH+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 CGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 173
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 118 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 165
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 166 HLARECTIEAT 176
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 40/104 (38%), Gaps = 39/104 (37%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR---------------------------CYACHQAG 108
SS C+ C +GH+AR CP + CY C ++G
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGRGRGRGGFSSSRGFQFISSSLPDICYRCGESG 61
Query: 109 HMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
H+AK+C Q CY CG GH++ DCK +K
Sbjct: 62 HLAKDCDLQED------------ACYNCGRGGHIAKDCKEPRKE 93
>gi|343426719|emb|CBQ70247.1| related to GIS2-Putative zinc finger protein, proposed to be
involved in the RAS/cAMP signaling pathway [Sporisorium
reilianum SRZ2]
Length = 178
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---------- 58
CY C + GH CP + A G G CYKC +GH AR C T +
Sbjct: 50 CYKCNETGHISRECPTNPAPVAGGP--GGECYKCGQHGHIARACPTAGPSTRGGFGGAPR 107
Query: 59 -----CYNCSGQGHVAKDCTVKSSII-----CYNCNSSGHFARNCPNDSSKRCYACHQAG 108
CYNC G GH++++CT + CYNCN +GH +R CP +K CY C + G
Sbjct: 108 AGGRSCYNCGGVGHLSRECTSPAGAAAGGQRCYNCNENGHISRECPKPQTKSCYRCGEEG 167
Query: 109 HMAKECP 115
H++ CP
Sbjct: 168 HLSAACP 174
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 69/168 (41%), Gaps = 46/168 (27%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT--------CY 60
CYNC GH C ++ CYKCN GH +REC T CY
Sbjct: 28 CYNCGQQGHISSQCGMEAQPK--------TCYKCNETGHISRECPTNPAPVAGGPGGECY 79
Query: 61 NCSGQGHVAKDCTVKSSII--------------CYNCNSSGHFARNCPNDSS-----KRC 101
C GH+A+ C CYNC GH +R C + + +RC
Sbjct: 80 KCGQHGHIARACPTAGPSTRGGFGGAPRAGGRSCYNCGGVGHLSRECTSPAGAAAGGQRC 139
Query: 102 YACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
Y C++ GH+++ECP + +CY CG +GHLS C V
Sbjct: 140 YNCNENGHISRECP-----------KPQTKSCYRCGEEGHLSAACPQV 176
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS-SKRCYACHQAGHMAKECPG 116
TC+NC GH A C + CYNC GH + C ++ K CY C++ GH+++ECP
Sbjct: 6 TCFNCGQPGHNAAACPTAGNPSCYNCGQQGHISSQCGMEAQPKTCYKCNETGHISRECP- 64
Query: 117 QTAGKSPEPVV-DMSLTCYVCGHQGHLSYDCKLVQKS 152
+P PV CY CG GH++ C S
Sbjct: 65 ----TNPAPVAGGPGGECYKCGQHGHIARACPTAGPS 97
>gi|91179150|gb|ABE27759.1| vasa [Azumapecten farreri]
Length = 801
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 58/133 (43%), Gaps = 23/133 (17%)
Query: 39 CYKCNNYGHFARECATESVT--------CYNCSGQGHVAKDCTVKSSII-----CYNCNS 85
C+KC GHFAREC T C+ C +GH A++C C+ C
Sbjct: 170 CHKCGEDGHFARECPTGGGGRGGGGGGKCHKCGEEGHFARECPTGGGGGGGDRSCFKCGE 229
Query: 86 SGHFARNCPN------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
GH +R CP + C+ C + GHM++ECP G C+ CG Q
Sbjct: 230 QGHMSRECPKGGGGGGGGDRSCFKCGEQGHMSRECPSSGGGGGGG----GDRGCFKCGEQ 285
Query: 140 GHLSYDCKLVQKS 152
GH S +C +KS
Sbjct: 286 GHFSRECPNAEKS 298
Score = 79.0 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 21/126 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------TCYNC 62
C+ C + GH+ CP G C+KC GHFAREC T +C+ C
Sbjct: 170 CHKCGEDGHFARECPTGGGGRGGGGGGK--CHKCGEEGHFARECPTGGGGGGGDRSCFKC 227
Query: 63 SGQGHVAKDCTVKSSII------CYNCNSSGHFARNCPND-------SSKRCYACHQAGH 109
QGH++++C C+ C GH +R CP+ + C+ C + GH
Sbjct: 228 GEQGHMSRECPKGGGGGGGGDRSCFKCGEQGHMSRECPSSGGGGGGGGDRGCFKCGEQGH 287
Query: 110 MAKECP 115
++ECP
Sbjct: 288 FSRECP 293
>gi|156337146|ref|XP_001619808.1| hypothetical protein NEMVEDRAFT_v1g782 [Nematostella vectensis]
gi|156203704|gb|EDO27708.1| predicted protein [Nematostella vectensis]
Length = 624
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 66/148 (44%), Gaps = 36/148 (24%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSGQ 65
C C + GH+ CPQ +R C+KCN GHFAREC C+ C+
Sbjct: 36 CRKCGESGHFARDCPQGGGGGSR------TCHKCNEEGHFARECPNADSGGNKCFKCNES 89
Query: 66 GHVAKDC-----------TVKSSIICYNCNSSGHFARNCPN-------------DSSKRC 101
GH A++C S CY CN +GHFAR CPN S C
Sbjct: 90 GHFARECPNSGGGGGGFGGGSSGSTCYKCNETGHFARECPNAESNGGGFGGGGGSSDSTC 149
Query: 102 YACHQAGHMAKECPGQTAGKS---PEPV 126
+ C Q GH A+ECP ++A P+PV
Sbjct: 150 FKCQQTGHFARECPNESAAGENGIPKPV 177
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 60/127 (47%), Gaps = 19/127 (14%)
Query: 39 CYKCNNYGHFARECAT----ESVTCYNCSGQGHVAKDCTVKSS--IICYNCNSSGHFARN 92
C KC GHFAR+C S TC+ C+ +GH A++C S C+ CN SGHFAR
Sbjct: 36 CRKCGESGHFARDCPQGGGGGSRTCHKCNEEGHFARECPNADSGGNKCFKCNESGHFARE 95
Query: 93 CPNDSSKR-----------CYACHQAGHMAKECPGQTAGKSPEPVVDMS--LTCYVCGHQ 139
CPN CY C++ GH A+ECP + S TC+ C
Sbjct: 96 CPNSGGGGGGFGGGSSGSTCYKCNETGHFARECPNAESNGGGFGGGGGSSDSTCFKCQQT 155
Query: 140 GHLSYDC 146
GH + +C
Sbjct: 156 GHFAREC 162
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Query: 8 QCYNCFDFGHYQYSCPQ--KSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQ 65
+C+ C + GH+ CP G G CYKCN GHFAREC N
Sbjct: 82 KCFKCNESGHFARECPNSGGGGGGFGGGSSGSTCYKCNETGHFARECP-------NAESN 134
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
G S C+ C +GHFAR CPN+S+
Sbjct: 135 GGGFGGGGGSSDSTCFKCQQTGHFARECPNESA 167
>gi|387017354|gb|AFJ50795.1| Cellular nucleic acid binding protein [Crotalus adamanteus]
Length = 171
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 22/166 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR-----------GDKVGIVCYKCNNYGHFAREC- 52
S+ +C+ C GH+ CP + +CY+C GH A++C
Sbjct: 2 SSNECFKCGRTGHWARECPTGIGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDCD 61
Query: 53 ATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
E CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + GH
Sbjct: 62 LQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGH 121
Query: 110 MAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 IQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 167
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 59/136 (43%), Gaps = 35/136 (25%)
Query: 39 CYKCNNYGHFARECATESV---------------------TCYNCSGQGHVAKDCTVKSS 77
C+KC GH+AREC T CY C GH+AKDC ++
Sbjct: 6 CFKCGRTGHWARECPTGIGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 78 IICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
CYNC GH A++C +R CY C + GH+A++C K CY
Sbjct: 66 EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK-----------CY 114
Query: 135 VCGHQGHLSYDCKLVQ 150
CG GH+ DC V+
Sbjct: 115 SCGEFGHIQKDCTKVK 130
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 112 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 159
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 160 HLARECTIEAT 170
>gi|225449579|ref|XP_002283925.1| PREDICTED: cellular nucleic acid-binding protein [Vitis vinifera]
gi|296086261|emb|CBI31702.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 24/150 (16%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC------ATESV 57
ST C+NC + GH CP VC+ C GH AR+C A ++
Sbjct: 74 NSTTMCWNCKESGHLASQCPNDP-----------VCHMCGKMGHLARDCSSPGLPAHDAR 122
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP-G 116
C NC GH+A DCT + + C NC+ +GH AR+C N+ C C+ +GH+A++CP
Sbjct: 123 LCNNCYKPGHIAADCTNEKA--CNNCHKTGHLARDCLNEPV--CNICNISGHVARQCPKS 178
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ ++ P D +TC+ CG GH+S DC
Sbjct: 179 RLVPETGGPFRD--ITCHNCGQPGHISRDC 206
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 64/120 (53%), Gaps = 15/120 (12%)
Query: 29 DARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGH 88
D R + +C KC GHFAR+C +V C NC GH+A +C S+ +C+NC SGH
Sbjct: 31 DHRVHRQDYLCNKCKRPGHFARDCPNVTV-CNNCGLPGHIAAECN--STTMCWNCKESGH 87
Query: 89 FARNCPNDSSKRCYACHQAGHMAKEC--PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
A CPND C+ C + GH+A++C PG P D L C C GH++ DC
Sbjct: 88 LASQCPNDPV--CHMCGKMGHLARDCSSPGL-------PAHDARL-CNNCYKPGHIAADC 137
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSAD--------ARGDKVGIVCYKCNNYGHFARECAT------ 54
C NC+ GH C + + + AR VC CN GH AR+C
Sbjct: 124 CNNCYKPGHIAADCTNEKACNNCHKTGHLARDCLNEPVCNICNISGHVARQCPKSRLVPE 183
Query: 55 -----ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
+TC+NC GH+++DC S +IC NC GH + CP
Sbjct: 184 TGGPFRDITCHNCGQPGHISRDCV--SIVICNNCGGRGHQSFECP 226
>gi|125532839|gb|EAY79404.1| hypothetical protein OsI_34532 [Oryza sativa Indica Group]
Length = 255
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 75/162 (46%), Gaps = 34/162 (20%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------ESV 57
+S C+NC + GH SCP + +C C GH AREC+ E
Sbjct: 74 SSKDLCWNCKEPGHMANSCPNEG-----------ICRNCGKSGHIARECSAPPMLPGEMR 122
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
C NC GH+A +CT + + C NC SGH ARNCPN+ C C+ +GH+A+ECP
Sbjct: 123 LCSNCYKPGHLAAECTNEKA--CNNCRKSGHLARNCPNEPV--CNLCNVSGHLARECPKS 178
Query: 118 TA-----------GKSPEPVVD--MSLTCYVCGHQGHLSYDC 146
A G +P P + C C GH+S DC
Sbjct: 179 DAINERGGPPPFRGGAPPPFRGGYSDVVCRACNQVGHMSRDC 220
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 68/151 (45%), Gaps = 29/151 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGI--------VCYKCNNYGHFARECATESVTCY 60
C NC GH+ CP + A G I +C+ C GH A C E + C
Sbjct: 41 CNNCKRPGHFARDCPNVALCHACGLPGHIAAECSSKDLCWNCKEPGHMANSCPNEGI-CR 99
Query: 61 NCSGQGHVAKDCTVKSSI-----ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
NC GH+A++C+ + +C NC GH A C N+ K C C ++GH+A+ CP
Sbjct: 100 NCGKSGHIARECSAPPMLPGEMRLCSNCYKPGHLAAECTNE--KACNNCRKSGHLARNCP 157
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
EPV C +C GHL+ +C
Sbjct: 158 N-------EPV------CNLCNVSGHLAREC 175
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 11/109 (10%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
+C C GHFAR+C ++ C+ C GH+A +C+ K +C+NC GH A +CPN+
Sbjct: 40 LCNNCKRPGHFARDCPNVAL-CHACGLPGHIAAECSSKD--LCWNCKEPGHMANSCPNEG 96
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C C ++GH+A+EC +P + C C GHL+ +C
Sbjct: 97 I--CRNCGKSGHIAREC------SAPPMLPGEMRLCSNCYKPGHLAAEC 137
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 52/139 (37%), Gaps = 36/139 (25%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
M C NC+ GH C + + C C GH AR C E V C
Sbjct: 116 MLPGEMRLCSNCYKPGHLAAECTNEKA-----------CNNCRKSGHLARNCPNEPV-CN 163
Query: 61 NCSGQGHVAKDCTVK------------------------SSIICYNCNSSGHFARNCPND 96
C+ GH+A++C S ++C CN GH +R+C
Sbjct: 164 LCNVSGHLARECPKSDAINERGGPPPFRGGAPPPFRGGYSDVVCRACNQVGHMSRDCMAG 223
Query: 97 SSKRCYACHQAGHMAKECP 115
+ C+ C GHMA ECP
Sbjct: 224 AFMICHNCGGRGHMAYECP 242
>gi|189192671|ref|XP_001932674.1| cellular nucleic acid-binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978238|gb|EDU44864.1| cellular nucleic acid-binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 265
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 72/144 (50%), Gaps = 15/144 (10%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CYNCSGQ 65
C NC + GH + C Q+ +A + C C GH AR+C E V C NC +
Sbjct: 58 CGNCNELGHVRKHCKQEQAA-RENPQPETQCVYCQEIGHRARDCPKERVNRFACKNCKQE 116
Query: 66 GHVAKDCTVKSS---IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKS 122
GH AK+C S + C CN +GHF+++CPN +++ C C A H+AKEC
Sbjct: 117 GHNAKECPEPRSAEGVECRKCNETGHFSKDCPNVAARTCRNCGSADHIAKEC-------- 168
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDC 146
+P ++TC C GH S DC
Sbjct: 169 DQPRNPDTVTCRNCEEVGHFSKDC 192
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-TCY 60
+ C NC GH CP+ SA+ G+ C KCN GHF+++C + TC
Sbjct: 103 ERVNRFACKNCKQEGHNAKECPEPRSAE------GVECRKCNETGHFSKDCPNVAARTCR 156
Query: 61 NCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNC--PNDSSK-RCYACHQAGHMAKEC 114
NC H+AK+C ++ C NC GHF+++C P D SK +C C + GH C
Sbjct: 157 NCGSADHIAKECDQPRNPDTVTCRNCEEVGHFSKDCPKPRDYSKVKCSNCQEMGHTHVRC 216
Query: 115 PGQTA 119
A
Sbjct: 217 KAPKA 221
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 22/148 (14%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTCYNC 62
QC C + GH CP++ C C GH A+EC + E V C C
Sbjct: 85 TQCVYCQEIGHRARDCPKERVNR-------FACKNCKQEGHNAKECPEPRSAEGVECRKC 137
Query: 63 SGQGHVAKDCTVKSSIICYNCNSSGHFARNCP---NDSSKRCYACHQAGHMAKECPGQTA 119
+ GH +KDC ++ C NC S+ H A+ C N + C C + GH +K+C
Sbjct: 138 NETGHFSKDCPNVAARTCRNCGSADHIAKECDQPRNPDTVTCRNCEEVGHFSKDC----- 192
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
P+P + C C GH CK
Sbjct: 193 ---PKPRDYSKVKCSNCQEMGHTHVRCK 217
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 42/104 (40%), Gaps = 26/104 (25%)
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSSKR--------CYACHQAGHMAKECP----- 115
+DC V +C NCN GH ++C + + R C C + GH A++CP
Sbjct: 50 VEDCGVP---LCGNCNELGHVRKHCKQEQAARENPQPETQCVYCQEIGHRARDCPKERVN 106
Query: 116 ----------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
G A + PEP + C C GH S DC V
Sbjct: 107 RFACKNCKQEGHNAKECPEPRSAEGVECRKCNETGHFSKDCPNV 150
>gi|157909782|ref|NP_001103215.1| cellular nucleic acid-binding protein isoform 2 [Mus musculus]
gi|187608744|ref|NP_001120667.1| cellular nucleic acid-binding protein isoform 5 [Homo sapiens]
gi|68359739|gb|AAY96754.1| cellular nucleic acid binding protein beta variant 1 [Homo sapiens]
gi|74142441|dbj|BAE31974.1| unnamed protein product [Mus musculus]
Length = 171
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 22/166 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR-----------GDKVGIVCYKCNNYGHFAREC- 52
S+ +C+ C GH+ CP + +CY+C GH A++C
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
Query: 53 ATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
E CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + GH
Sbjct: 62 LQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGH 121
Query: 110 MAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 IQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 167
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 59/136 (43%), Gaps = 35/136 (25%)
Query: 39 CYKCNNYGHFARECATESV---------------------TCYNCSGQGHVAKDCTVKSS 77
C+KC GH+AREC T CY C GH+AKDC ++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 78 IICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
CYNC GH A++C +R CY C + GH+A++C K CY
Sbjct: 66 EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK-----------CY 114
Query: 135 VCGHQGHLSYDCKLVQ 150
CG GH+ DC V+
Sbjct: 115 SCGEFGHIQKDCTKVK 130
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 112 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 159
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 160 HLARECTIEAT 170
>gi|2665788|gb|AAB88490.1| cellular nucleic acid binding protein [Gallus gallus]
Length = 172
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 23/167 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR------------GDKVGIVCYKCNNYGHFAREC 52
S+ +C+ C GH+ CP + +CY+C GH A++C
Sbjct: 2 SSNECFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDC 61
Query: 53 -ATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAG 108
E CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + G
Sbjct: 62 DLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFG 121
Query: 109 HMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
H+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 HIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 168
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 113 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 160
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 161 HLARECTIEAT 171
>gi|294874952|ref|XP_002767169.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239868618|gb|EEQ99886.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 141
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CY 60
S+ C+ C + GH+ CPQ SS+ G + + CY C H AR+C E C+
Sbjct: 13 VSSSTCFICNEPGHFARDCPQASSSRPTGRRP-MNCYNCGKPDHLARDCPNEQTNQRPCF 71
Query: 61 NCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS--------------KRCYACHQ 106
C GH A+DCT + C+ C +GH AR+CPN+ + + C+ C +
Sbjct: 72 KCGKVGHFARDCTEPDTRACFRCGETGHLARDCPNEDTRPESERAPRGRSEGRNCFKCGK 131
Query: 107 AGHMAKECP 115
GH+A++CP
Sbjct: 132 PGHLARDCP 140
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 38 VCYKCNNYGHFARECATES---------VTCYNCSGQGHVAKDCTVKSS--IICYNCNSS 86
C+ CN GHFAR+C S + CYNC H+A+DC + + C+ C
Sbjct: 17 TCFICNEPGHFARDCPQASSSRPTGRRPMNCYNCGKPDHLARDCPNEQTNQRPCFKCGKV 76
Query: 87 GHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVV---DMSLTCYVCGHQGHLS 143
GHFAR+C ++ C+ C + GH+A++CP + E C+ CG GHL+
Sbjct: 77 GHFARDCTEPDTRACFRCGETGHLARDCPNEDTRPESERAPRGRSEGRNCFKCGKPGHLA 136
Query: 144 YDC 146
DC
Sbjct: 137 RDC 139
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 22/104 (21%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQ 65
+ CYNC H CP + + C+KC GHFAR+C ++ C+ C
Sbjct: 45 MNCYNCGKPDHLARDCPNEQTNQR-------PCFKCGKVGHFARDCTEPDTRACFRCGET 97
Query: 66 GHVAKDCTVKSSII--------------CYNCNSSGHFARNCPN 95
GH+A+DC + + C+ C GH AR+CPN
Sbjct: 98 GHLARDCPNEDTRPESERAPRGRSEGRNCFKCGKPGHLARDCPN 141
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 97 SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
SS C+ C++ GH A++CP ++ + P + CY CG HL+ DC Q
Sbjct: 14 SSSTCFICNEPGHFARDCPQASSSR---PTGRRPMNCYNCGKPDHLARDCPNEQ 64
>gi|330417907|ref|NP_001193408.1| zinc finger protein 9 [Bos taurus]
gi|296470847|tpg|DAA12962.1| TPA: zinc finger protein 9-like [Bos taurus]
Length = 171
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 22/166 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR------------GDKVGIVCYKCNNYGHFAREC 52
S+ +C+ C GH+ +C + A R + ++CY+C +GH+A++C
Sbjct: 2 SSKECFKCGRVGHWAPACSKGGGARGRGARGRGHGAQCSSTTLPVICYRCGKFGHYAKDC 61
Query: 53 ATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
CYNC GH+AKDC + CY C GH AR+C ++CY+C ++GH
Sbjct: 62 DLLDDICYNCGKSGHIAKDCAEPKREGERCCYTCGRPGHLARDCDRQEERKCYSCGKSGH 121
Query: 110 MAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+ K C G+ + + CY CG GHL+ +C +
Sbjct: 122 IQKYCTQVKCYRCGEIGHVAINCRKMNEVNCYRCGESGHLTRECPI 167
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 49/130 (37%), Gaps = 33/130 (25%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIV--------------CYKCNNYGH 47
S+T + CY C FGHY C K G + CY C GH
Sbjct: 41 STTLPVICYRCGKFGHYAKDCDLLDDICYNCGKSGHIAKDCAEPKREGERCCYTCGRPGH 100
Query: 48 FARECATES-------------------VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGH 88
AR+C + V CY C GHVA +C + + CY C SGH
Sbjct: 101 LARDCDRQEERKCYSCGKSGHIQKYCTQVKCYRCGEIGHVAINCRKMNEVNCYRCGESGH 160
Query: 89 FARNCPNDSS 98
R CP +++
Sbjct: 161 LTRECPIEAN 170
>gi|149642096|ref|XP_001505515.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Ornithorhynchus anatinus]
Length = 177
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 75/172 (43%), Gaps = 28/172 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR------------------GDKVGIVCYKCNNYG 46
S +C+ C GH+ CP + +CY+C G
Sbjct: 2 SNNECFKCGRSGHWARECPTGGGRGRGLRSRGRGGFSSGRGFQFVSSSLPDICYRCGESG 61
Query: 47 HFARECATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYA 103
H A++C + CYNC GH+AKDC + CYNC GH AR+C + ++CY+
Sbjct: 62 HLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYS 121
Query: 104 CHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
C + GH+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 CGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 173
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 118 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 165
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 166 HLARECTIEAT 176
>gi|45382487|ref|NP_990238.1| cellular nucleic acid-binding protein [Gallus gallus]
gi|6225175|sp|O42395.1|CNBP_CHICK RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|2232217|gb|AAB62243.1| cellular nucleic acid binding protein [Gallus gallus]
Length = 172
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 23/167 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR------------GDKVGIVCYKCNNYGHFAREC 52
S+ +C+ C GH+ CP + +CY+C GH A++C
Sbjct: 2 SSNECFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDC 61
Query: 53 -ATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAG 108
E CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + G
Sbjct: 62 DLQEDKACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFG 121
Query: 109 HMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
H+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 HIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 168
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 113 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 160
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 161 HLARECTIEAT 171
>gi|432865753|ref|XP_004070596.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 3
[Oryzias latipes]
Length = 164
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 12/160 (7%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVG--IVCYKCNNYGHFARECATESVT 58
M +S +C+ C GH+ CP S RG G + CY+C + GH AR+C
Sbjct: 1 MEMSSNSECFGCGRPGHWVKHCPNASGTRGRGRGRGRELFCYRCGDQGHMARDCDQTEDA 60
Query: 59 CYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
CYNC GH+++DC + +CY C +GH AR+C + + ++CY+C GH+ K C
Sbjct: 61 CYNCHRSGHISRDCKEPKKEREQLCYTCGKAGHMARDCDHANEQKCYSCGGFGHIQKLCD 120
Query: 116 -------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
G+ + CY CG GHL+ +C +
Sbjct: 121 KVKCYRCGEIGHVAVHCSKASETNCYNCGKAGHLAKECTI 160
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 60/127 (47%), Gaps = 27/127 (21%)
Query: 39 CYKCNNYGHFARECATES------------VTCYNCSGQGHVAKDCTVKSSIICYNCNSS 86
C+ C GH+ + C S + CY C QGH+A+DC ++ CYNC+ S
Sbjct: 9 CFGCGRPGHWVKHCPNASGTRGRGRGRGRELFCYRCGDQGHMARDCD-QTEDACYNCHRS 67
Query: 87 GHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLS 143
GH +R+C +R CY C +AGHMA++C K CY CG GH+
Sbjct: 68 GHISRDCKEPKKEREQLCYTCGKAGHMARDCDHANEQK-----------CYSCGGFGHIQ 116
Query: 144 YDCKLVQ 150
C V+
Sbjct: 117 KLCDKVK 123
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT-CYNCSGQG 66
+CY+C FGH Q C + + CY+C GH A C+ S T CYNC G
Sbjct: 105 KCYSCGGFGHIQKLCDK------------VKCYRCGEIGHVAVHCSKASETNCYNCGKAG 152
Query: 67 HVAKDCTVKSS 77
H+AK+CT++++
Sbjct: 153 HLAKECTIEAT 163
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 23/90 (25%)
Query: 74 VKSSIICYNCNSSGHFARNCPNDSSKR-----------CYACHQAGHMAKECPGQTAGKS 122
+ S+ C+ C GH+ ++CPN S R CY C GHMA++C
Sbjct: 3 MSSNSECFGCGRPGHWVKHCPNASGTRGRGRGRGRELFCYRCGDQGHMARDCD------- 55
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
CY C GH+S DCK +K
Sbjct: 56 -----QTEDACYNCHRSGHISRDCKEPKKE 80
>gi|343960683|dbj|BAK61931.1| cellular nucleic acid-binding protein [Pan troglodytes]
Length = 170
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR-----------GDKVGIVCYKCNNYGHFARECA 53
S+ +C+ C GH+ CP + +CY+C GH A++C
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
Query: 54 TESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
+ CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + GH+
Sbjct: 62 LQGDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHI 121
Query: 111 AKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
K+C G+T + + C CG GHL+ +C +
Sbjct: 122 QKDCTKVKCYRCGETGHVAINCSKTSEVNCSRCGESGHLARECTI 166
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 59/136 (43%), Gaps = 36/136 (26%)
Query: 39 CYKCNNYGHFARECATESV---------------------TCYNCSGQGHVAKDCTVKSS 77
C+KC GH+AREC T CY C GH+AKDC ++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQGD 65
Query: 78 IICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
CYNC GH A++C +R CY C + GH+A++C K CY
Sbjct: 66 A-CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK-----------CY 113
Query: 135 VCGHQGHLSYDCKLVQ 150
CG GH+ DC V+
Sbjct: 114 SCGEFGHIQKDCTKVK 129
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V C C G
Sbjct: 111 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCSRCGESG 158
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 159 HLARECTIEAT 169
>gi|294873524|ref|XP_002766658.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239867715|gb|EEQ99375.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 144
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 18/125 (14%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CYNCSGQ 65
C+ C + GH+ CPQ SS+ + + CY C H AR+C E C+ C
Sbjct: 19 CFICNEPGHFARDCPQASSSTRPTGRRPMNCYNCGKPDHLARDCPNEQTNQRPCFKCGQV 78
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS---------------KRCYACHQAGHM 110
GH A+DCT + C+ C +GH AR+CPN+ + + C+ C Q GH
Sbjct: 79 GHFARDCTAPDTRACFRCGETGHLARDCPNEDTRPESDRAPRGRGAEGRNCFKCGQPGHF 138
Query: 111 AKECP 115
A++CP
Sbjct: 139 ARDCP 143
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 16/124 (12%)
Query: 39 CYKCNNYGHFARECATES----------VTCYNCSGQGHVAKDCTVKSS--IICYNCNSS 86
C+ CN GHFAR+C S + CYNC H+A+DC + + C+ C
Sbjct: 19 CFICNEPGHFARDCPQASSSTRPTGRRPMNCYNCGKPDHLARDCPNEQTNQRPCFKCGQV 78
Query: 87 GHFARNCPNDSSKRCYACHQAGHMAKECPGQ----TAGKSPEPVVDMSLTCYVCGHQGHL 142
GHFAR+C ++ C+ C + GH+A++CP + + ++P C+ CG GH
Sbjct: 79 GHFARDCTAPDTRACFRCGETGHLARDCPNEDTRPESDRAPRGRGAEGRNCFKCGQPGHF 138
Query: 143 SYDC 146
+ DC
Sbjct: 139 ARDC 142
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 23/110 (20%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-ATESVTCY 60
+ + CYNC H CP + + C+KC GHFAR+C A ++ C+
Sbjct: 42 TGRRPMNCYNCGKPDHLARDCPNEQTNQR-------PCFKCGQVGHFARDCTAPDTRACF 94
Query: 61 NCSGQGHVAKDCTVKSSII---------------CYNCNSSGHFARNCPN 95
C GH+A+DC + + C+ C GHFAR+CPN
Sbjct: 95 RCGETGHLARDCPNEDTRPESDRAPRGRGAEGRNCFKCGQPGHFARDCPN 144
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 101 CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
C+ C++ GH A++CP A S P + CY CG HL+ DC Q
Sbjct: 19 CFICNEPGHFARDCP--QASSSTRPTGRRPMNCYNCGKPDHLARDCPNEQ 66
>gi|225427758|ref|XP_002267480.1| PREDICTED: zinc finger protein GIS2-like isoform 1 [Vitis vinifera]
Length = 258
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 67/116 (57%), Gaps = 11/116 (9%)
Query: 31 RGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFA 90
RG G +C C GH+AREC +V C+NCS GH+A +CT +S +C+NC GH A
Sbjct: 47 RGFSQGNLCKNCKRPGHYARECPNVAV-CHNCSLPGHIASECTTRS--LCWNCQEPGHTA 103
Query: 91 RNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
NCPN+ C+ C + GH+A++C P P D+ L C C QGH++ DC
Sbjct: 104 SNCPNEGI--CHTCGKTGHLARDC-----SAPPVPPGDLRL-CNNCYKQGHIAADC 151
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 72/153 (47%), Gaps = 25/153 (16%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------ 57
T+ C+NC + GH +CP + +C+ C GH AR+C+ V
Sbjct: 88 TTRSLCWNCQEPGHTASNCPNEG-----------ICHTCGKTGHLARDCSAPPVPPGDLR 136
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
C NC QGH+A DCT + C NC +GH AR+C ND C C+ +GH+A++CP
Sbjct: 137 LCNNCYKQGHIAADCT--NDKACNNCRKTGHLARDCRNDPV--CNLCNVSGHVARQCPKA 192
Query: 118 TA----GKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G P + C C GH+S DC
Sbjct: 193 NVLGDRGGGPRSSGFRDIVCRNCQQLGHMSRDC 225
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 12/73 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVG---------IVCYKCNNYGHFARECATESVTC 59
C C GH CP+ A+ GD+ G IVC C GH +R+CA + C
Sbjct: 176 CNLCNVSGHVARQCPK---ANVLGDRGGGPRSSGFRDIVCRNCQQLGHMSRDCAAPLMIC 232
Query: 60 YNCSGQGHVAKDC 72
NC G+GH+A +C
Sbjct: 233 RNCGGRGHMAFEC 245
>gi|229366404|gb|ACQ58182.1| Cellular nucleic acid-binding protein [Anoplopoma fimbria]
Length = 170
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 78/161 (48%), Gaps = 17/161 (10%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKV-------GIVCYKCNNYGHFARECATE 55
S+S+ +CY C GH+ CP S + + + CY+C + GH AR+C
Sbjct: 4 SSSSSECYQCGRSGHWAKHCPSSSMGSSGRGRGRGRGRGKDLFCYRCGDQGHMARDCDQT 63
Query: 56 SVTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAK 112
CYNC GH+++DC + +CY CN +GH AR+C + ++++CY+C GH+ K
Sbjct: 64 EDACYNCHRSGHISRDCKEPKKEREQLCYICNKAGHMARDCGHANNQKCYSCGGFGHIQK 123
Query: 113 ECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C G + CY CG GHL+ DC
Sbjct: 124 LCDKVKCYRCGDIGHVAVHCAKTSETNCYNCGTAGHLARDC 164
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQGH 67
CYNC GH C + + +CY CN GH AR+C + CY+C G GH
Sbjct: 67 CYNCHRSGHISRDCKEPKKEREQ------LCYICNKAGHMARDCGHANNQKCYSCGGFGH 120
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
+ K C + CY C GH A +C S CY C AGH+A++C +
Sbjct: 121 IQKLC---DKVKCYRCGDIGHVAVHCAKTSETNCYNCGTAGHLARDCTNE 167
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 63/132 (47%), Gaps = 32/132 (24%)
Query: 39 CYKCNNYGHFAREC-----------------ATESVTCYNCSGQGHVAKDCTVKSSIICY 81
CY+C GH+A+ C + + CY C QGH+A+DC ++ CY
Sbjct: 10 CYQCGRSGHWAKHCPSSSMGSSGRGRGRGRGRGKDLFCYRCGDQGHMARDCD-QTEDACY 68
Query: 82 NCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGH 138
NC+ SGH +R+C +R CY C++AGHMA++C K CY CG
Sbjct: 69 NCHRSGHISRDCKEPKKEREQLCYICNKAGHMARDCGHANNQK-----------CYSCGG 117
Query: 139 QGHLSYDCKLVQ 150
GH+ C V+
Sbjct: 118 FGHIQKLCDKVK 129
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 40/93 (43%), Gaps = 28/93 (30%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR----------------CYACHQAGHMAKECPGQTA 119
SS CY C SGH+A++CP+ S CY C GHMA++C QT
Sbjct: 6 SSSECYQCGRSGHWAKHCPSSSMGSSGRGRGRGRGRGKDLFCYRCGDQGHMARDCD-QTE 64
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
CY C GH+S DCK +K
Sbjct: 65 D-----------ACYNCHRSGHISRDCKEPKKE 86
>gi|432090075|gb|ELK23671.1| Cellular nucleic acid-binding protein [Myotis davidii]
Length = 142
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 10/121 (8%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCP 94
+CY+C GH A++C + CYNC GH+AKDC + CYNC GH AR+C
Sbjct: 18 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 77
Query: 95 NDSSKRCYACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ ++CY+C + GH+ K+C G+T + + CY CG GHL+ +C
Sbjct: 78 HADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECT 137
Query: 148 L 148
+
Sbjct: 138 I 138
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 15/96 (15%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKEC 114
CY C GH+AKDC ++ CYNC GH A++C +R CY C + GH+A++C
Sbjct: 18 ICYRCGESGHLAKDCDLQEDA-CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 76
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
K CY CG GH+ DC V+
Sbjct: 77 DHADEQK-----------CYSCGEFGHIQKDCTKVK 101
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 83 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 130
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 131 HLARECTIEAT 141
>gi|294948106|ref|XP_002785619.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239899598|gb|EER17415.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 141
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CY 60
S+ C+ C + GH+ CPQ SS+ G + + CY C H AR+C E C+
Sbjct: 13 VSSSTCFICNEPGHFARDCPQASSSRPTGRRP-MNCYNCGKPDHLARDCPNEQTNQRPCF 71
Query: 61 NCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS--------------KRCYACHQ 106
C GH A+DCT + C+ C +GH AR+CPN+ + + C+ C +
Sbjct: 72 KCGKVGHFARDCTEPDTRACFRCGQTGHLARDCPNEDTRPESERAPRGRSEGRNCFKCGK 131
Query: 107 AGHMAKECP 115
GH+A++CP
Sbjct: 132 PGHLARDCP 140
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 38 VCYKCNNYGHFARECATES---------VTCYNCSGQGHVAKDCTVKSS--IICYNCNSS 86
C+ CN GHFAR+C S + CYNC H+A+DC + + C+ C
Sbjct: 17 TCFICNEPGHFARDCPQASSSRPTGRRPMNCYNCGKPDHLARDCPNEQTNQRPCFKCGKV 76
Query: 87 GHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVV---DMSLTCYVCGHQGHLS 143
GHFAR+C ++ C+ C Q GH+A++CP + E C+ CG GHL+
Sbjct: 77 GHFARDCTEPDTRACFRCGQTGHLARDCPNEDTRPESERAPRGRSEGRNCFKCGKPGHLA 136
Query: 144 YDC 146
DC
Sbjct: 137 RDC 139
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 22/104 (21%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQ 65
+ CYNC H CP + + C+KC GHFAR+C ++ C+ C
Sbjct: 45 MNCYNCGKPDHLARDCPNEQTNQR-------PCFKCGKVGHFARDCTEPDTRACFRCGQT 97
Query: 66 GHVAKDCTVKSSII--------------CYNCNSSGHFARNCPN 95
GH+A+DC + + C+ C GH AR+CPN
Sbjct: 98 GHLARDCPNEDTRPESERAPRGRSEGRNCFKCGKPGHLARDCPN 141
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 97 SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
SS C+ C++ GH A++CP ++ + P + CY CG HL+ DC Q
Sbjct: 14 SSSTCFICNEPGHFARDCPQASSSR---PTGRRPMNCYNCGKPDHLARDCPNEQ 64
>gi|299752665|ref|XP_001841159.2| DNA-binding protein hexbp [Coprinopsis cinerea okayama7#130]
gi|298409943|gb|EAU80696.2| DNA-binding protein hexbp [Coprinopsis cinerea okayama7#130]
Length = 173
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 40/166 (24%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQG 66
C+NC FGH +CP+ + CY C GH +R+C A + +CY C +G
Sbjct: 7 CFNCGGFGHQAANCPKAGTP---------TCYNCGGEGHVSRDCTQAAKPKSCYRCGEEG 57
Query: 67 HVAKDCT--------VKSSIICYNCNSSGHFARNCPND-------SSKRCYACHQAGHMA 111
H+++DCT V CY C +GH AR+CP+ S K CY C GH++
Sbjct: 58 HLSRDCTSDNAAAGGVSRGGECYRCGKTGHLARSCPDSGYGSFGGSQKTCYTCGGVGHLS 117
Query: 112 KECP-----------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++C G + P+P CY CG +GH+S DC
Sbjct: 118 RDCVQGSKCYNCSSIGHISRDCPQP---QKRACYQCGQEGHISRDC 160
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--------ATESVTCY 60
CY C + GH C ++A A G G CY+C GH AR C TCY
Sbjct: 50 CYRCGEEGHLSRDCTSDNAA-AGGVSRGGECYRCGKTGHLARSCPDSGYGSFGGSQKTCY 108
Query: 61 NCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
C G GH+++DC S CYNC+S GH +R+CP + CY C Q GH++++CP
Sbjct: 109 TCGGVGHLSRDCVQGSK--CYNCSSIGHISRDCPQPQKRACYQCGQEGHISRDCP 161
>gi|26347241|dbj|BAC37269.1| unnamed protein product [Mus musculus]
Length = 171
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 22/166 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR-----------GDKVGIVCYKCNNYGHFAREC- 52
S+ +C+ C GH+ CP + +CY+C GH A++C
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGEPGHLAKDCD 61
Query: 53 ATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
E CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + GH
Sbjct: 62 LQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGH 121
Query: 110 MAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 IQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 167
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 59/136 (43%), Gaps = 35/136 (25%)
Query: 39 CYKCNNYGHFARECATESV---------------------TCYNCSGQGHVAKDCTVKSS 77
C+KC GH+AREC T CY C GH+AKDC ++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGEPGHLAKDCDLQED 65
Query: 78 IICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
CYNC GH A++C +R CY C + GH+A++C K CY
Sbjct: 66 EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK-----------CY 114
Query: 135 VCGHQGHLSYDCKLVQ 150
CG GH+ DC V+
Sbjct: 115 SCGEFGHIQKDCTKVK 130
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 112 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 159
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 160 HLARECTIEAT 170
>gi|197632621|gb|ACH71034.1| zinc finger protein 9-1 [Salmo salar]
Length = 165
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 17/163 (10%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKV-----GIVCYKCNNYGHFARECATE 55
MSS+S +C+ C GH+ +CP+ S + + CY+C GH AR+C
Sbjct: 1 MSSSS--ECFRCGRPGHWIKNCPEAGSGGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQT 58
Query: 56 SVTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAK 112
CYNC GH+++DC + CY+C +GH AR+C + + ++CY+C GH+ K
Sbjct: 59 EDACYNCHRSGHISRDCKEPKKEREQCCYSCGKAGHVARDCDHANEQKCYSCGGFGHIQK 118
Query: 113 ECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
C G+ + + + CY CG+ GHL+ +C +
Sbjct: 119 LCDKVKCYRCGEIGHVAVQCSKASEVNCYKCGNTGHLAKECTI 161
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES-VTCYNCSGQG 66
+CY+C FGH Q C + + CY+C GH A +C+ S V CY C G
Sbjct: 106 KCYSCGGFGHIQKLCDK------------VKCYRCGEIGHVAVQCSKASEVNCYKCGNTG 153
Query: 67 HVAKDCTVKSS 77
H+AK+CT++++
Sbjct: 154 HLAKECTIEAT 164
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 26/93 (27%)
Query: 74 VKSSIICYNCNSSGHFARNCPNDSSKR--------------CYACHQAGHMAKECPGQTA 119
+ SS C+ C GH+ +NCP S CY C + GH+A++C
Sbjct: 1 MSSSSECFRCGRPGHWIKNCPEAGSGGRGRGRGRGRGKDLFCYRCGEQGHIARDC----- 55
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
E D CY C GH+S DCK +K
Sbjct: 56 ----EQTED---ACYNCHRSGHISRDCKEPKKE 81
>gi|225707608|gb|ACO09650.1| Cellular nucleic acid-binding protein [Osmerus mordax]
Length = 165
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 13/161 (8%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGI---VCYKCNNYGHFARECATESV 57
M +S+ +C+ C GH+ +CP + CY+C GH AR+C
Sbjct: 1 MDMSSSSECFGCGRSGHWIKNCPNAGGRGRGRGRGRGKDQFCYRCGEQGHMARDCEQSED 60
Query: 58 TCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
CYNC GH+++DC + +CY+C +GH AR+C + + ++CY+C GH+ K C
Sbjct: 61 ACYNCHRTGHISRDCKEPKKEREQVCYSCGKAGHVARDCDHANEQKCYSCGGFGHIQKLC 120
Query: 115 P-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
G+ + + CY CG GHL+ +C +
Sbjct: 121 DKVKCYRCGEIGHVAVHCSKSNEMNCYNCGKTGHLAKECTI 161
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C FGH Q C + + CY+C GH A C+ + + CYNC G
Sbjct: 106 KCYSCGGFGHIQKLCDK------------VKCYRCGEIGHVAVHCSKSNEMNCYNCGKTG 153
Query: 67 HVAKDCTVKSS 77
H+AK+CT++++
Sbjct: 154 HLAKECTIEAT 164
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 24/91 (26%)
Query: 74 VKSSIICYNCNSSGHFARNCPN------------DSSKRCYACHQAGHMAKECPGQTAGK 121
+ SS C+ C SGH+ +NCPN + CY C + GHMA++C
Sbjct: 3 MSSSSECFGCGRSGHWIKNCPNAGGRGRGRGRGRGKDQFCYRCGEQGHMARDC------- 55
Query: 122 SPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
E D CY C GH+S DCK +K
Sbjct: 56 --EQSED---ACYNCHRTGHISRDCKEPKKE 81
>gi|255543853|ref|XP_002512989.1| cellular nucleic acid binding protein, putative [Ricinus communis]
gi|223548000|gb|EEF49492.1| cellular nucleic acid binding protein, putative [Ricinus communis]
Length = 252
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 31 RGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFA 90
RG +C C GHFAREC ++ C+NC GH+A +CT KS +C+NC GH A
Sbjct: 43 RGFSQNNLCKNCKRPGHFARECPNVAI-CHNCGLPGHIASECTTKS--LCWNCREPGHMA 99
Query: 91 RNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+CPN+ C+ C +AGH AKEC Q P P D+ L C C QGH++ DC
Sbjct: 100 SHCPNEGI--CHTCGKAGHRAKECTAQ-----PLPPGDLRL-CNNCYKQGHIAADC 147
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 67/149 (44%), Gaps = 21/149 (14%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------ 57
T+ C+NC + GH CP + +C+ C GH A+EC + +
Sbjct: 84 TTKSLCWNCREPGHMASHCPNEG-----------ICHTCGKAGHRAKECTAQPLPPGDLR 132
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
C NC QGH+A DCT + C NC +GH AR C ND C C+ AGH+A+ CP
Sbjct: 133 LCNNCYKQGHIAADCTNDKA--CNNCRKTGHLARECQNDPI--CNMCNVAGHVARHCPKA 188
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ C C GH+S DC
Sbjct: 189 NIFGDRRSSGYQDIVCRNCHQYGHMSRDC 217
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 56/127 (44%), Gaps = 25/127 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NC+ GH +AD DK C C GH AREC + + C C+ GHV
Sbjct: 134 CNNCYKQGHI--------AADCTNDKA---CNNCRKTGHLARECQNDPI-CNMCNVAGHV 181
Query: 69 AKDCTVKS-----------SIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP-G 116
A+ C + I+C NC+ GH +R+C C+ C GH A ECP G
Sbjct: 182 ARHCPKANIFGDRRSSGYQDIVCRNCHQYGHMSRDCMGPLMI-CHNCGGRGHRAVECPSG 240
Query: 117 QTAGKSP 123
+ + P
Sbjct: 241 RMMDRFP 247
>gi|4929293|gb|AAD33937.1|AF144698_1 cellular nucleic acid binding protein [Rhinella arenarum]
Length = 178
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 29/173 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR-------------------GDKVGIVCYKCNNY 45
S+ +C+ C GH+ CP + +CY+C
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 46 GHFARECATESVTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCY 102
GH A++C + CYNC GH+AKDC + CYNC GH AR+C + ++CY
Sbjct: 62 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDCEHADEQKCY 121
Query: 103 ACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+C + GH+ K+C G T + + CY CG GHL+ +C +
Sbjct: 122 SCGEFGHIQKDCTKVKCYRCGDTGHVAINCSKTSEVNCYRCGESGHLARECTI 174
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C + GH A C+ T V CY C G
Sbjct: 119 KCYSCGEFGHIQKDCTK------------VKCYRCGDTGHVAINCSKTSEVNCYRCGESG 166
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 167 HLARECTIEAT 177
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 40/105 (38%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR----------------------------CYACHQA 107
SS C+ C +GH+AR CP + CY C ++
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
GH+AK+C Q CY CG GH++ DCK +K
Sbjct: 62 GHLAKDCDLQED------------ACYNCGRGGHIAKDCKEPRKE 94
>gi|189524881|ref|XP_001922882.1| PREDICTED: cellular nucleic acid-binding protein isoform 1 [Danio
rerio]
gi|189524883|ref|XP_001922883.1| PREDICTED: cellular nucleic acid-binding protein isoform 2 [Danio
rerio]
gi|326671493|ref|XP_003199446.1| PREDICTED: cellular nucleic acid-binding protein [Danio rerio]
gi|326671495|ref|XP_003199447.1| PREDICTED: cellular nucleic acid-binding protein [Danio rerio]
Length = 161
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQ--KSSADARGDKVGIVCYKCNNYGHFARECATESVTCYN 61
S+ +C+ C GH+ +CP + RG + CY+C GH AR+C CYN
Sbjct: 1 MSSNECFGCGRTGHWIKNCPNAGRGRGKGRGRGKDLFCYRCGEPGHVARDCERTEDACYN 60
Query: 62 CSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP--- 115
C GH+++DC + +CYNC +GH AR+C + + ++CY+C GH+ K C
Sbjct: 61 CGRGGHISRDCKEPKKEREQVCYNCGKAGHMARDCDHANEQKCYSCGGFGHIQKGCEKVK 120
Query: 116 ----GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
G+ + + + CY CG GH++ +C +
Sbjct: 121 CYRCGEIGHVAVQCSKASEVNCYNCGKSGHVAKECTI 157
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 58/127 (45%), Gaps = 27/127 (21%)
Query: 39 CYKCNNYGHFARECAT------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSS 86
C+ C GH+ + C + + CY C GHVA+DC ++ CYNC
Sbjct: 6 CFGCGRTGHWIKNCPNAGRGRGKGRGRGKDLFCYRCGEPGHVARDCE-RTEDACYNCGRG 64
Query: 87 GHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLS 143
GH +R+C +R CY C +AGHMA++C K CY CG GH+
Sbjct: 65 GHISRDCKEPKKEREQVCYNCGKAGHMARDCDHANEQK-----------CYSCGGFGHIQ 113
Query: 144 YDCKLVQ 150
C+ V+
Sbjct: 114 KGCEKVK 120
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES-VTCYNCSGQG 66
+CY+C FGH Q C + + CY+C GH A +C+ S V CYNC G
Sbjct: 102 KCYSCGGFGHIQKGCEK------------VKCYRCGEIGHVAVQCSKASEVNCYNCGKSG 149
Query: 67 HVAKDCTVKSS 77
HVAK+CT++++
Sbjct: 150 HVAKECTIEAT 160
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 23/88 (26%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR-----------CYACHQAGHMAKECPGQTAGKSPE 124
SS C+ C +GH+ +NCPN R CY C + GH+A++C E
Sbjct: 2 SSNECFGCGRTGHWIKNCPNAGRGRGKGRGRGKDLFCYRCGEPGHVARDC---------E 52
Query: 125 PVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
D CY CG GH+S DCK +K
Sbjct: 53 RTED---ACYNCGRGGHISRDCKEPKKE 77
>gi|262072939|dbj|BAI47777.1| CCHC-type zinc finger, nucleic acid binding protein [Sus scrofa]
Length = 137
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 10/121 (8%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCP 94
+CY+C GH A++C + CYNC GH+AKDC + CYNC GH AR+C
Sbjct: 13 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 72
Query: 95 NDSSKRCYACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ ++CY+C + GH+ K+C G+T + + CY CG GHL+ +C
Sbjct: 73 HADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECT 132
Query: 148 L 148
+
Sbjct: 133 I 133
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 15/96 (15%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKEC 114
CY C GH+AKDC ++ CYNC GH A++C +R CY C + GH+A++C
Sbjct: 13 ICYRCGESGHLAKDCDLQEDA-CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 71
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
K CY CG GH+ DC V+
Sbjct: 72 DHADEQK-----------CYSCGEFGHIQKDCTKVK 96
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 78 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 125
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 126 HLARECTIEAT 136
>gi|297744732|emb|CBI37994.3| unnamed protein product [Vitis vinifera]
Length = 259
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 67/116 (57%), Gaps = 11/116 (9%)
Query: 31 RGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFA 90
RG G +C C GH+AREC +V C+NCS GH+A +CT +S +C+NC GH A
Sbjct: 35 RGFSQGNLCKNCKRPGHYARECPNVAV-CHNCSLPGHIASECTTRS--LCWNCQEPGHTA 91
Query: 91 RNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
NCPN+ C+ C + GH+A++C P P D+ L C C QGH++ DC
Sbjct: 92 SNCPNEGI--CHTCGKTGHLARDC-----SAPPVPPGDLRL-CNNCYKQGHIAADC 139
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 72/153 (47%), Gaps = 25/153 (16%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT----- 58
T+ C+NC + GH +CP + +C+ C GH AR+C+ V
Sbjct: 76 TTRSLCWNCQEPGHTASNCPNEG-----------ICHTCGKTGHLARDCSAPPVPPGDLR 124
Query: 59 -CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
C NC QGH+A DCT + C NC +GH AR+C ND C C+ +GH+A++CP
Sbjct: 125 LCNNCYKQGHIAADCT--NDKACNNCRKTGHLARDCRNDPV--CNLCNVSGHVARQCPKA 180
Query: 118 TA----GKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G P + C C GH+S DC
Sbjct: 181 NVLGDRGGGPRSSGFRDIVCRNCQQLGHMSRDC 213
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 12/73 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVG---------IVCYKCNNYGHFARECATESVTC 59
C C GH CP+ A+ GD+ G IVC C GH +R+CA + C
Sbjct: 164 CNLCNVSGHVARQCPK---ANVLGDRGGGPRSSGFRDIVCRNCQQLGHMSRDCAAPLMIC 220
Query: 60 YNCSGQGHVAKDC 72
NC G+GH+A +C
Sbjct: 221 RNCGGRGHMAFEC 233
>gi|432865749|ref|XP_004070594.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 1
[Oryzias latipes]
gi|432865751|ref|XP_004070595.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Oryzias latipes]
Length = 166
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVG----IVCYKCNNYGHFARECATES 56
M +S +C+ C GH+ CP S RG G + CY+C + GH AR+C
Sbjct: 1 MEMSSNSECFGCGRPGHWVKHCPNASGTRGRGRGRGRGKELFCYRCGDQGHMARDCDQTE 60
Query: 57 VTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKE 113
CYNC GH+++DC + +CY C +GH AR+C + + ++CY+C GH+ K
Sbjct: 61 DACYNCHRSGHISRDCKEPKKEREQLCYTCGKAGHMARDCDHANEQKCYSCGGFGHIQKL 120
Query: 114 CP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
C G+ + CY CG GHL+ +C +
Sbjct: 121 CDKVKCYRCGEIGHVAVHCSKASETNCYNCGKAGHLAKECTI 162
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 60/129 (46%), Gaps = 29/129 (22%)
Query: 39 CYKCNNYGHFARECATESVT--------------CYNCSGQGHVAKDCTVKSSIICYNCN 84
C+ C GH+ + C S T CY C QGH+A+DC ++ CYNC+
Sbjct: 9 CFGCGRPGHWVKHCPNASGTRGRGRGRGRGKELFCYRCGDQGHMARDCD-QTEDACYNCH 67
Query: 85 SSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGH 141
SGH +R+C +R CY C +AGHMA++C K CY CG GH
Sbjct: 68 RSGHISRDCKEPKKEREQLCYTCGKAGHMARDCDHANEQK-----------CYSCGGFGH 116
Query: 142 LSYDCKLVQ 150
+ C V+
Sbjct: 117 IQKLCDKVK 125
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT-CYNCSGQG 66
+CY+C FGH Q C + + CY+C GH A C+ S T CYNC G
Sbjct: 107 KCYSCGGFGHIQKLCDK------------VKCYRCGEIGHVAVHCSKASETNCYNCGKAG 154
Query: 67 HVAKDCTVKSS 77
H+AK+CT++++
Sbjct: 155 HLAKECTIEAT 165
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 25/92 (27%)
Query: 74 VKSSIICYNCNSSGHFARNCPNDSSKR-------------CYACHQAGHMAKECPGQTAG 120
+ S+ C+ C GH+ ++CPN S R CY C GHMA++C
Sbjct: 3 MSSNSECFGCGRPGHWVKHCPNASGTRGRGRGRGRGKELFCYRCGDQGHMARDCD----- 57
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
CY C GH+S DCK +K
Sbjct: 58 -------QTEDACYNCHRSGHISRDCKEPKKE 82
>gi|284925124|ref|NP_001165425.1| cellular nucleic acid binding protein b [Xenopus laevis]
gi|1531585|emb|CAA69031.1| cellular nucleic acid binding protein [Xenopus laevis]
Length = 178
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 29/173 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR-------------------GDKVGIVCYKCNNY 45
S+ +C+ C GH+ CP + +CY+C
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 46 GHFARECATESVTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCY 102
GH A++C + CYNC GH+AKDC + CYNC GH AR+C + ++CY
Sbjct: 62 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDCEHADEQKCY 121
Query: 103 ACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+C + GH+ K+C G T + + CY CG GHL+ +C +
Sbjct: 122 SCGEFGHIQKDCTKVKCYRCGDTGHVAINCSKTSEVNCYRCGESGHLARECTI 174
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C + GH A C+ T V CY C G
Sbjct: 119 KCYSCGEFGHIQKDCTK------------VKCYRCGDTGHVAINCSKTSEVNCYRCGESG 166
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 167 HLARECTIEAT 177
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 40/105 (38%), Gaps = 40/105 (38%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR----------------------------CYACHQA 107
SS C+ C SGH+AR CP + CY C ++
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
GH+AK+C Q CY CG GH++ DCK +K
Sbjct: 62 GHLAKDCDLQED------------ACYNCGRGGHIAKDCKEPRKE 94
>gi|340057209|emb|CCC51551.1| putative universal minicircle sequence binding protein (UMSBP)
[Trypanosoma vivax Y486]
Length = 198
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 70/159 (44%), Gaps = 26/159 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------ESVTCYNC 62
CYNC GH CP G + C+ C +GH +R+C CYNC
Sbjct: 46 CYNCGQPGHLSRECPTMPHGAVGGARA---CFTCGQFGHLSRDCPGMRGAGFGGRACYNC 102
Query: 63 SGQGHVAKDC------TVKSSIICYNCNSSGHFARNCP-------NDSSKRCYACHQAGH 109
GH+++DC + CYNC GH +R+CP ++ CY C Q GH
Sbjct: 103 GQPGHISRDCPGMRGGSSFGGRSCYNCGKVGHISRDCPTARGAYGGPQTRSCYHCQQEGH 162
Query: 110 MAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+A++CP A + V CY CG GH+S C +
Sbjct: 163 IARDCPNAPA----DGAVRGGGACYNCGQPGHISRACPV 197
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 64/131 (48%), Gaps = 22/131 (16%)
Query: 39 CYKCNNYGHFAREC------ATESVTCYNCSGQGHVAKDC------TVKSSIICYNCNSS 86
CY+C GHFAREC A CYNC GH++++C V + C+ C
Sbjct: 20 CYRCGEAGHFARECTNVPPGAMGDRACYNCGQPGHLSRECPTMPHGAVGGARACFTCGQF 79
Query: 87 GHFARNCPND-----SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGH 141
GH +R+CP + CY C Q GH++++CPG G S +CY CG GH
Sbjct: 80 GHLSRDCPGMRGAGFGGRACYNCGQPGHISRDCPGMRGGSS-----FGGRSCYNCGKVGH 134
Query: 142 LSYDCKLVQKS 152
+S DC + +
Sbjct: 135 ISRDCPTARGA 145
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 17/104 (16%)
Query: 58 TCYNCSGQGHVAKDCT-----VKSSIICYNCNSSGHFARNCPN------DSSKRCYACHQ 106
+CY C GH A++CT CYNC GH +R CP ++ C+ C Q
Sbjct: 19 SCYRCGEAGHFARECTNVPPGAMGDRACYNCGQPGHLSRECPTMPHGAVGGARACFTCGQ 78
Query: 107 AGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
GH++++CPG CY CG GH+S DC ++
Sbjct: 79 FGHLSRDCPGMRG------AGFGGRACYNCGQPGHISRDCPGMR 116
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 35/82 (42%), Gaps = 10/82 (12%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---- 57
SS CYNC GH CP ++ A G CY C GH AR+C
Sbjct: 119 SSFGGRSCYNCGKVGHISRDCP--TARGAYGGPQTRSCYHCQQEGHIARDCPNAPADGAV 176
Query: 58 ----TCYNCSGQGHVAKDCTVK 75
CYNC GH+++ C VK
Sbjct: 177 RGGGACYNCGQPGHISRACPVK 198
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 95 NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
D + CY C +AGH A+EC + P CY CG GHLS +C +
Sbjct: 14 EDGASSCYRCGEAGHFAREC------TNVPPGAMGDRACYNCGQPGHLSRECPTM 62
>gi|449266322|gb|EMC77386.1| Cellular nucleic acid-binding protein [Columba livia]
Length = 181
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 10/121 (8%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCP 94
+CY+C GH A++C + CYNC GH+AKDC + CYNC GH AR+C
Sbjct: 57 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 116
Query: 95 NDSSKRCYACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ ++CY+C + GH+ K+C G+T + + CY CG GHL+ +C
Sbjct: 117 HADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECT 176
Query: 148 L 148
+
Sbjct: 177 I 177
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 122 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 169
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 170 HLARECTIEAT 180
>gi|213623438|gb|AAI69746.1| CNBP protein [Xenopus laevis]
Length = 178
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 29/173 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR-------------------GDKVGIVCYKCNNY 45
S+ +C+ C GH+ CP + +CY+C
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 46 GHFARECATESVTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCY 102
GH A++C + CYNC GH+AKDC + CYNC GH AR+C + +CY
Sbjct: 62 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDCDHADEHKCY 121
Query: 103 ACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+C + GH+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 SCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 174
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 119 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 166
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 167 HLARECTIEAT 177
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 40/105 (38%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR----------------------------CYACHQA 107
SS C+ C +GH+AR CP + CY C ++
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
GH+AK+C Q CY CG GH++ DCK +K
Sbjct: 62 GHLAKDCDLQED------------ACYNCGRGGHIAKDCKEPRKE 94
>gi|99907876|gb|ABF68761.1| CNBP mutant S158A, partial [synthetic construct]
Length = 163
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKV--GIVCYKCNNYGHFARECATESVTCY 60
ST +C+ C GH+ +CP RG + CY+C GH AR+C CY
Sbjct: 2 DMSTSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACY 61
Query: 61 NCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP-- 115
NC H+++DC + CYNC +GH AR+C + + ++CY+C GH K C
Sbjct: 62 NCHRSXHISRDCKEPKKEREQCCYNCGKAGHVARDCDHANEQKCYSCGGFGHFQKLCDKV 121
Query: 116 -----GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
G+ + + + CY CG GHL+ DC +
Sbjct: 122 KCYRCGEIGHVAVQCSKATEVNCYNCGKTGHLARDCAI 159
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 27/127 (21%)
Query: 39 CYKCNNYGHFARECAT------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSS 86
C+ C GH+ + C + + CY C QGH+A+DC ++ CYNC+ S
Sbjct: 8 CFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCE-QTEDACYNCHRS 66
Query: 87 GHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLS 143
H +R+C +R CY C +AGH+A++C K CY CG GH
Sbjct: 67 XHISRDCKEPKKEREQCCYNCGKAGHVARDCDHANEQK-----------CYSCGGFGHFQ 115
Query: 144 YDCKLVQ 150
C V+
Sbjct: 116 KLCDKVK 122
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH C + CY C +GHF + C + V CY C GHV
Sbjct: 84 CYNCGKAGHVARDCDHANEQK---------CYSCGGFGHFQKLC--DKVKCYRCGEIGHV 132
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
A C+ + + CYNC +GH AR+C ++S
Sbjct: 133 AVQCSKATEVNCYNCGKTGHLARDCAIEAS 162
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 23/88 (26%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR-----------CYACHQAGHMAKECPGQTAGKSPE 124
S+ C+ C SGH+ +NCPN R CY C + GH+A++C E
Sbjct: 4 STSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDC---------E 54
Query: 125 PVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
D CY C H+S DCK +K
Sbjct: 55 QTED---ACYNCHRSXHISRDCKEPKKE 79
>gi|294882220|ref|XP_002769652.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239873234|gb|EER02370.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 144
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 18/125 (14%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CYNCSGQ 65
C+ C + GH+ CPQ +S+ + + CY C H AR+C E C+ C
Sbjct: 19 CFICNEPGHFARDCPQATSSSRPTGRRPMNCYNCGKPDHLARDCPNEQTNQRPCFKCGQV 78
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS---------------KRCYACHQAGHM 110
GH A+DCT + C+ C +GH AR+CPN+ + + C+ C Q GH
Sbjct: 79 GHFARDCTAPDTRACFRCGETGHLARDCPNEDTRPESDRAPRGRGAEGRNCFKCGQPGHF 138
Query: 111 AKECP 115
A++CP
Sbjct: 139 ARDCP 143
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 16/124 (12%)
Query: 39 CYKCNNYGHFAREC--ATES--------VTCYNCSGQGHVAKDCTVKSS--IICYNCNSS 86
C+ CN GHFAR+C AT S + CYNC H+A+DC + + C+ C
Sbjct: 19 CFICNEPGHFARDCPQATSSSRPTGRRPMNCYNCGKPDHLARDCPNEQTNQRPCFKCGQV 78
Query: 87 GHFARNCPNDSSKRCYACHQAGHMAKECPGQ----TAGKSPEPVVDMSLTCYVCGHQGHL 142
GHFAR+C ++ C+ C + GH+A++CP + + ++P C+ CG GH
Sbjct: 79 GHFARDCTAPDTRACFRCGETGHLARDCPNEDTRPESDRAPRGRGAEGRNCFKCGQPGHF 138
Query: 143 SYDC 146
+ DC
Sbjct: 139 ARDC 142
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 23/110 (20%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-ATESVTCY 60
+ + CYNC H CP + + C+KC GHFAR+C A ++ C+
Sbjct: 42 TGRRPMNCYNCGKPDHLARDCPNEQTNQR-------PCFKCGQVGHFARDCTAPDTRACF 94
Query: 61 NCSGQGHVAKDCTVKSSII---------------CYNCNSSGHFARNCPN 95
C GH+A+DC + + C+ C GHFAR+CPN
Sbjct: 95 RCGETGHLARDCPNEDTRPESDRAPRGRGAEGRNCFKCGQPGHFARDCPN 144
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 101 CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
C+ C++ GH A++CP T+ S P + CY CG HL+ DC Q
Sbjct: 19 CFICNEPGHFARDCPQATS--SSRPTGRRPMNCYNCGKPDHLARDCPNEQ 66
>gi|238490081|ref|XP_002376278.1| zinc knuckle domain protein (Byr3), putative [Aspergillus flavus
NRRL3357]
gi|83770972|dbj|BAE61105.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698666|gb|EED55006.1| zinc knuckle domain protein (Byr3), putative [Aspergillus flavus
NRRL3357]
gi|391871140|gb|EIT80305.1| E3 ubiquitin ligase interacting with arginine methyltransferase
[Aspergillus oryzae 3.042]
Length = 190
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 61/120 (50%), Gaps = 15/120 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADA-RGDKVGIVCYKCNNYGHFARECATESV---------- 57
CY C GH CPQ S D G G CYKC + GH AR C+
Sbjct: 72 CYRCSGVGHISRDCPQAPSGDGYSGATGGQECYKCGHVGHIARNCSQGGYSGDGYGGRQH 131
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS--SKRCYACHQAGHMAKECP 115
TCY+C G GH+A+DCT CYNC GH +R+CP+++ + CY C Q GH+ CP
Sbjct: 132 TCYSCGGHGHMARDCTHGQK--CYNCGEVGHVSRDCPSEARGERVCYKCKQPGHVQAACP 189
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
+T +CY C GH +C Q + CY C +GH AR+C T CYNC
Sbjct: 97 ATGGQECYKCGHVGHIARNCSQGGYSGDGYGGRQHTCYSCGGHGHMARDC-THGQKCYNC 155
Query: 63 SGQGHVAKDC--TVKSSIICYNCNSSGHFARNCPN 95
GHV++DC + +CY C GH CPN
Sbjct: 156 GEVGHVSRDCPSEARGERVCYKCKQPGHVQAACPN 190
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 53/126 (42%), Gaps = 34/126 (26%)
Query: 42 CNNYGHFAREC--ATESVTCYNCSGQGHVAKDCTVKSS----------IICYNCNSSGHF 89
C + REC A + CY CSG GH+++DC S CY C GH
Sbjct: 53 CVGFDDERRECTVAPKEKPCYRCSGVGHISRDCPQAPSGDGYSGATGGQECYKCGHVGHI 112
Query: 90 ARNCPNDSSKR---------CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQG 140
ARNC CY+C GHMA++C T G+ CY CG G
Sbjct: 113 ARNCSQGGYSGDGYGGRQHTCYSCGGHGHMARDC---THGQ----------KCYNCGEVG 159
Query: 141 HLSYDC 146
H+S DC
Sbjct: 160 HVSRDC 165
>gi|417396563|gb|JAA45315.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 178
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 29/173 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADA-------------RG-----DKVGIVCYKCNNYG 46
S+ +C+ C GH+ CP RG + +CY+C G
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLSDICYRCGESG 61
Query: 47 HFAREC-ATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRCY 102
H A++C E CYNC GH+AKDC + CYNC GH AR+C + ++CY
Sbjct: 62 HLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCY 121
Query: 103 ACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+C + GH+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 SCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 174
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 119 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 166
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 167 HLARECTIEAT 177
>gi|385301300|gb|EIF45501.1| zinc knuckle domain protein [Dekkera bruxellensis AWRI1499]
Length = 189
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 13/117 (11%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTC 59
T+T QC+NC GH + CP+ + CY C +GH A++C +E + C
Sbjct: 47 TNTKQCFNCGKIGHIRSECPEPPHRQ-------VKCYNCGKFGHVAKDCYAEKRSEKIVC 99
Query: 60 YNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS-SKRCYACHQAGHMAKECP 115
YNC G H+AKDC + CYNC +GH A+ C + S +K C+ C + GH+A+ CP
Sbjct: 100 YNCGGFNHLAKDCRA-DPVKCYNCGETGHLAKFCHSKSKAKVCFKCGEEGHLARFCP 155
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 66/146 (45%), Gaps = 23/146 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT---ESVTCYNCSGQ 65
CYNC H CP + + C+ C GH EC V CYNC
Sbjct: 28 CYNCRSPDHEAKDCPLPKQTNTK------QCFNCGKIGHIRSECPEPPHRQVKCYNCGKF 81
Query: 66 GHVAKDCTVK---SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKS 122
GHVAKDC + I+CYNC H A++C D K CY C + GH+AK C ++ K
Sbjct: 82 GHVAKDCYAEKRSEKIVCYNCGGFNHLAKDCRADPVK-CYNCGETGHLAKFCHSKSKAK- 139
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDCKL 148
C+ CG +GHL+ C +
Sbjct: 140 ---------VCFKCGEEGHLARFCPM 156
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 57/115 (49%), Gaps = 13/115 (11%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCP 94
CYKC GH A +C CYNC H AKDC + ++ C+NC GH CP
Sbjct: 7 TCYKCGLTGHKAEDCPQTQRLCYNCRSPDHEAKDCPLPKQTNTKQCFNCGKIGHIRSECP 66
Query: 95 NDSSK--RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ +CY C + GH+AK+C A K E +V CY CG HL+ DC+
Sbjct: 67 EPPHRQVKCYNCGKFGHVAKDC---YAEKRSEKIV-----CYNCGGFNHLAKDCR 113
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 13/98 (13%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP---NDSSKRCYACHQAGHMAKEC 114
TCY C GH A+DC ++ +CYNC S H A++CP ++K+C+ C + GH+ EC
Sbjct: 7 TCYKCGLTGHKAEDCP-QTQRLCYNCRSPDHEAKDCPLPKQTNTKQCFNCGKIGHIRSEC 65
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
PEP + CY CG GH++ DC ++S
Sbjct: 66 --------PEP-PHRQVKCYNCGKFGHVAKDCYAEKRS 94
>gi|359475089|ref|XP_003631583.1| PREDICTED: zinc finger protein GIS2-like isoform 2 [Vitis vinifera]
Length = 246
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 67/116 (57%), Gaps = 11/116 (9%)
Query: 31 RGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFA 90
RG G +C C GH+AREC +V C+NCS GH+A +CT +S +C+NC GH A
Sbjct: 35 RGFSQGNLCKNCKRPGHYARECPNVAV-CHNCSLPGHIASECTTRS--LCWNCQEPGHTA 91
Query: 91 RNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
NCPN+ C+ C + GH+A++C P P D+ L C C QGH++ DC
Sbjct: 92 SNCPNEGI--CHTCGKTGHLARDC-----SAPPVPPGDLRL-CNNCYKQGHIAADC 139
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 72/153 (47%), Gaps = 25/153 (16%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT----- 58
T+ C+NC + GH +CP + +C+ C GH AR+C+ V
Sbjct: 76 TTRSLCWNCQEPGHTASNCPNEG-----------ICHTCGKTGHLARDCSAPPVPPGDLR 124
Query: 59 -CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
C NC QGH+A DCT + C NC +GH AR+C ND C C+ +GH+A++CP
Sbjct: 125 LCNNCYKQGHIAADCT--NDKACNNCRKTGHLARDCRNDPV--CNLCNVSGHVARQCPKA 180
Query: 118 TA----GKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G P + C C GH+S DC
Sbjct: 181 NVLGDRGGGPRSSGFRDIVCRNCQQLGHMSRDC 213
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 12/73 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVG---------IVCYKCNNYGHFARECATESVTC 59
C C GH CP+ A+ GD+ G IVC C GH +R+CA + C
Sbjct: 164 CNLCNVSGHVARQCPK---ANVLGDRGGGPRSSGFRDIVCRNCQQLGHMSRDCAAPLMIC 220
Query: 60 YNCSGQGHVAKDC 72
NC G+GH+A +C
Sbjct: 221 RNCGGRGHMAFEC 233
>gi|189303765|gb|ACD85807.1| cellular nucleic acid-binding protein [Ctenopharyngodon idella]
Length = 163
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKV--GIVCYKCNNYGHFARECATESVTCYNC 62
ST +C C GH+ +CP RG + CY+C GH AR+C CYNC
Sbjct: 4 STSECSGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACYNC 63
Query: 63 SGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP---- 115
GH+++DC + CYNC +GH AR+C + + ++CY+C GH+ K C
Sbjct: 64 HRSGHISRDCKEPKKEREQCCYNCGKAGHVARDCDHANEQKCYSCGGFGHIQKLCDKVKC 123
Query: 116 ---GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
G+ + + + CY CG GHL+ +C +
Sbjct: 124 YRCGEIGHVAVQCSKATEVNCYNCGKTGHLARECTI 159
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 27/127 (21%)
Query: 39 CYKCNNYGHFARECAT------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSS 86
C C GH+ + C + + CY C QGH+A+DC ++ CYNC+ S
Sbjct: 8 CSGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCE-QTEDACYNCHRS 66
Query: 87 GHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLS 143
GH +R+C +R CY C +AGH+A++C K CY CG GH+
Sbjct: 67 GHISRDCKEPKKEREQCCYNCGKAGHVARDCDHANEQK-----------CYSCGGFGHIQ 115
Query: 144 YDCKLVQ 150
C V+
Sbjct: 116 KLCDKVK 122
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH C + CY C +GH + C + V CY C GHV
Sbjct: 84 CYNCGKAGHVARDCDHANEQK---------CYSCGGFGHIQKLC--DKVKCYRCGEIGHV 132
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
A C+ + + CYNC +GH AR C ++S
Sbjct: 133 AVQCSKATEVNCYNCGKTGHLARECTIEAS 162
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 23/88 (26%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR-----------CYACHQAGHMAKECPGQTAGKSPE 124
S+ C C SGH+ +NCPN R CY C + GH+A++C E
Sbjct: 4 STSECSGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDC---------E 54
Query: 125 PVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
D CY C GH+S DCK +K
Sbjct: 55 QTED---ACYNCHRSGHISRDCKEPKKE 79
>gi|169604969|ref|XP_001795905.1| hypothetical protein SNOG_05500 [Phaeosphaeria nodorum SN15]
gi|111065444|gb|EAT86564.1| hypothetical protein SNOG_05500 [Phaeosphaeria nodorum SN15]
Length = 458
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSGQ 65
C NC + GH + C Q+ + + G+ C C GH AR+C E + C NC +
Sbjct: 261 CGNCGELGHIRKHCKQEVPEEV-SVQPGVECVYCKEPGHRARDCPKERINPFACKNCKQE 319
Query: 66 GHVAKDCTVKSS---IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKS 122
GH +K+C S + C CN +GHF+++CPN + + C C H+AKEC
Sbjct: 320 GHNSKECPEPRSAENVECRKCNETGHFSKDCPNVAKRTCRNCDSEDHVAKEC-------- 371
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDC 146
PEP C C GH S DC
Sbjct: 372 PEPRNPEKQQCRNCEKFGHFSKDC 395
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 57/113 (50%), Gaps = 13/113 (11%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQGH 67
C NC GH CP+ SA+ + C KCN GHF+++C TC NC + H
Sbjct: 313 CKNCKQEGHNSKECPEPRSAE------NVECRKCNETGHFSKDCPNVAKRTCRNCDSEDH 366
Query: 68 VAKDCTVKSSII---CYNCNSSGHFARNCPN--DSSK-RCYACHQAGHMAKEC 114
VAK+C + C NC GHF+++CP D SK +C C Q GH K C
Sbjct: 367 VAKECPEPRNPEKQQCRNCEKFGHFSKDCPEPKDWSKIQCNNCQQFGHTIKRC 419
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 67/154 (43%), Gaps = 22/154 (14%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATES 56
+S ++C C + GH CP++ C C GH ++EC + E+
Sbjct: 282 VSVQPGVECVYCKEPGHRARDCPKERINP-------FACKNCKQEGHNSKECPEPRSAEN 334
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP---NDSSKRCYACHQAGHMAKE 113
V C C+ GH +KDC + C NC+S H A+ CP N ++C C + GH +K+
Sbjct: 335 VECRKCNETGHFSKDCPNVAKRTCRNCDSEDHVAKECPEPRNPEKQQCRNCEKFGHFSKD 394
Query: 114 CPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
C PEP + C C GH CK
Sbjct: 395 C--------PEPKDWSKIQCNNCQQFGHTIKRCK 420
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 52/122 (42%), Gaps = 23/122 (18%)
Query: 33 DKVGI-VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFAR 91
+ +G+ +C C GH + C E V ++ +V+ + C C GH AR
Sbjct: 254 EDIGVPLCGNCGELGHIRKHCKQE------------VPEEVSVQPGVECVYCKEPGHRAR 301
Query: 92 NCPNDSSKR--CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
+CP + C C Q GH +KECP EP ++ C C GH S DC V
Sbjct: 302 DCPKERINPFACKNCKQEGHNSKECP--------EPRSAENVECRKCNETGHFSKDCPNV 353
Query: 150 QK 151
K
Sbjct: 354 AK 355
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 38 VCYKCNNYGHFARECATE------SVTCYNCSGQGHVAKDCTVKS-----SIICYNCNSS 86
C CN GHFAREC + + C+NC GH DCT + + IC +C
Sbjct: 39 TCRICNQTGHFARECPDKPEGGGLTGECFNCGQVGHNKADCTNERVERPFNGICNSCGVE 98
Query: 87 GHFARNCPNDSSKRCYACHQAGHMAKEC 114
GH AR CP + K C C Q GH A +C
Sbjct: 99 GHSARTCPTNPMK-CKLCDQEGHKALDC 125
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQ 65
T +C+NC GH + C + +C C GH AR C T + C C +
Sbjct: 63 TGECFNCGQVGHNKADCTNERVERP----FNGICNSCGVEGHSARTCPTNPMKCKLCDQE 118
Query: 66 GHVAKDCTVKSSI 78
GH A DC + +
Sbjct: 119 GHKALDCDQRRMV 131
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 19/86 (22%)
Query: 80 CYNCNSSGHFARNCPNDS-----SKRCYACHQAGHMAKECPGQ--------------TAG 120
C CN +GHFAR CP+ + C+ C Q GH +C + G
Sbjct: 40 CRICNQTGHFARECPDKPEGGGLTGECFNCGQVGHNKADCTNERVERPFNGICNSCGVEG 99
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDC 146
S + C +C +GH + DC
Sbjct: 100 HSARTCPTNPMKCKLCDQEGHKALDC 125
>gi|338714530|ref|XP_003363102.1| PREDICTED: cellular nucleic acid-binding protein-like [Equus
caballus]
Length = 172
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 23/167 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR-----------GDKVGIVCYKCNNYGHFAREC- 52
S+ +C+ C GH+ CP + +CY+C GH A++C
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
Query: 53 -ATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAG 108
+ +CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + G
Sbjct: 62 LQEDGKSCYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFG 121
Query: 109 HMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
H+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 HIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 168
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 59/137 (43%), Gaps = 36/137 (26%)
Query: 39 CYKCNNYGHFARECATESV---------------------TCYNCSGQGHVAKDCTVKSS 77
C+KC GH+AREC T CY C GH+AKDC ++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 78 -IICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTC 133
CYNC GH A++C +R CY C + GH+A++C K C
Sbjct: 66 GKSCYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK-----------C 114
Query: 134 YVCGHQGHLSYDCKLVQ 150
Y CG GH+ DC V+
Sbjct: 115 YSCGEFGHIQKDCTKVK 131
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 113 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 160
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 161 HLARECTIEAT 171
>gi|310756752|gb|ADP20517.1| cellular nucleic acid binding protein [Fukomys anselli]
Length = 178
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 29/173 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADA-------------RG-----DKVGIVCYKCNNYG 46
S+ +C+ C GH+ CP RG + +CY+C G
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESG 61
Query: 47 HFAREC-ATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRCY 102
H A++C E CYNC GH+AKDC + CYNC GH AR+C + ++CY
Sbjct: 62 HLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCY 121
Query: 103 ACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+C + GH+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 SCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 174
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 119 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 166
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 167 HLARECTIEAT 177
>gi|302142593|emb|CBI19796.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 69/116 (59%), Gaps = 11/116 (9%)
Query: 31 RGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFA 90
RG G +C C GHFAREC ++ C NC+ GH+A +CT +S +C+NC GH A
Sbjct: 43 RGFSQGNLCNNCKRPGHFARECPNVAI-CNNCNLPGHIASECTTQS--LCWNCREPGHMA 99
Query: 91 RNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
NCPN+ C++C++ GH A++CP T G P D+ L C C QGH++ DC
Sbjct: 100 SNCPNEGI--CHSCNKTGHRARDCP--TPGL---PSGDLRL-CNNCYKQGHIAADC 147
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 75/156 (48%), Gaps = 27/156 (17%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------ 57
T+ C+NC + GH +CP + +C+ CN GH AR+C T +
Sbjct: 84 TTQSLCWNCREPGHMASNCPNEG-----------ICHSCNKTGHRARDCPTPGLPSGDLR 132
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP-- 115
C NC QGH+A DCT + C NC +GH AR+C N+ C C+ AGH+A++CP
Sbjct: 133 LCNNCYKQGHIAADCTNDKA--CKNCRKTGHIARDCQNEPV--CNLCNIAGHVARQCPKA 188
Query: 116 ---GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
G+ G + C C GH+S DC +
Sbjct: 189 EIFGERGGGGRNTGF-RDVICRSCNQVGHMSRDCMV 223
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 32/144 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NC GH+ CP + +C CN GH A EC T+S+ C+NC GH+
Sbjct: 51 CNNCKRPGHFARECPNVA-----------ICNNCNLPGHIASECTTQSL-CWNCREPGHM 98
Query: 69 AKDCTVKSSIICYNCNSSGHFARNC-----PNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
A +C + IC++CN +GH AR+C P+ + C C++ GH+A +C A
Sbjct: 99 ASNCPNEG--ICHSCNKTGHRARDCPTPGLPSGDLRLCNNCYKQGHIAADCTNDKA---- 152
Query: 124 EPVVDMSLTCYVCGHQGHLSYDCK 147
C C GH++ DC+
Sbjct: 153 ---------CKNCRKTGHIARDCQ 167
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 63/145 (43%), Gaps = 31/145 (21%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
+ S C NC+ GH +AD DK C C GH AR+C E V C
Sbjct: 126 LPSGDLRLCNNCYKQGHI--------AADCTNDKA---CKNCRKTGHIARDCQNEPV-CN 173
Query: 61 NCSGQGHVAKDC---------------TVKSSIICYNCNSSGHFARNCPNDSSKRCYACH 105
C+ GHVA+ C T +IC +CN GH +R+C S C C
Sbjct: 174 LCNIAGHVARQCPKAEIFGERGGGGRNTGFRDVICRSCNQVGHMSRDC-MVSLVICNNCG 232
Query: 106 QAGHMAKECPGQTAGKSPEPVVDMS 130
GHMA ECP +G+ + V+ MS
Sbjct: 233 GRGHMAFECP---SGRFMDLVICMS 254
>gi|58004792|gb|AAW62457.1| cellular nucleic acid binding protein mutant 2-7 [synthetic
construct]
Length = 128
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCP 94
+CY+C GH A++C + CYNC GH+AKDC + CYNC GH AR+C
Sbjct: 4 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDCE 63
Query: 95 NDSSKRCYACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ ++CY+C + GH+ K+C G T + + CY CG GHL+ +C
Sbjct: 64 HADEQKCYSCGEFGHIQKDCTKVKCYRCGDTGHVAINCSKTSEVNCYRCGESGHLARECT 123
Query: 148 L 148
+
Sbjct: 124 I 124
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 15/96 (15%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKEC 114
CY C GH+AKDC ++ CYNC GH A++C +R CY C + GH+A++C
Sbjct: 4 ICYRCGESGHLAKDCDLQEDA-CYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDC 62
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
K CY CG GH+ DC V+
Sbjct: 63 EHADEQK-----------CYSCGEFGHIQKDCTKVK 87
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C + GH A C+ T V CY C G
Sbjct: 69 KCYSCGEFGHIQKDCTK------------VKCYRCGDTGHVAINCSKTSEVNCYRCGESG 116
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 117 HLARECTIEAT 127
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 9/54 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT 58
+ ++CY C D GH +C + S + CY+C GH AREC E+
Sbjct: 84 TKVKCYRCGDTGHVAINCSKTSE---------VNCYRCGESGHLARECTIEATA 128
>gi|7304969|ref|NP_038521.1| cellular nucleic acid-binding protein isoform 1 [Mus musculus]
gi|187608732|ref|NP_001120665.1| cellular nucleic acid-binding protein isoform 2 [Homo sapiens]
gi|395847858|ref|XP_003796581.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 1
[Otolemur garnettii]
gi|395847860|ref|XP_003796582.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Otolemur garnettii]
gi|395847862|ref|XP_003796583.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 3
[Otolemur garnettii]
gi|50403746|sp|P53996.2|CNBP_MOUSE RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|854675|gb|AAB60490.1| cellular nucleic acid binding protein [Mus musculus]
gi|30059133|gb|AAO31613.1| cellular nucleic acid binding protein [Mus musculus]
gi|37194897|gb|AAH58723.1| Cellular nucleic acid binding protein [Mus musculus]
gi|40738015|gb|AAR89463.1| cellular nucleic acid binding protein [Mus musculus]
gi|54696094|gb|AAV38419.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein) [Homo sapiens]
gi|68304555|gb|AAY89856.1| cellular nucleic acid binding protein alpha variant 1 [Homo
sapiens]
gi|74194928|dbj|BAE26042.1| unnamed protein product [Mus musculus]
gi|74204641|dbj|BAE35390.1| unnamed protein product [Mus musculus]
gi|310756754|gb|ADP20518.1| cellular nucleic acid binding protein [Heterocephalus glaber]
Length = 178
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 29/173 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADA-------------RG-----DKVGIVCYKCNNYG 46
S+ +C+ C GH+ CP RG + +CY+C G
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESG 61
Query: 47 HFAREC-ATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRCY 102
H A++C E CYNC GH+AKDC + CYNC GH AR+C + ++CY
Sbjct: 62 HLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCY 121
Query: 103 ACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+C + GH+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 SCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 174
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 119 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 166
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 167 HLARECTIEAT 177
>gi|187608738|ref|NP_001120666.1| cellular nucleic acid-binding protein isoform 4 [Homo sapiens]
gi|291393356|ref|XP_002713210.1| PREDICTED: zinc finger protein 9 isoform 2 [Oryctolagus cuniculus]
gi|68359783|gb|AAY96755.1| cellular nucleic acid binding protein beta variant 2 [Homo sapiens]
Length = 172
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 23/167 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR-----------GDKVGIVCYKCNNYGHFARECA 53
S+ +C+ C GH+ CP + +CY+C GH A++C
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
Query: 54 TES--VTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAG 108
+ CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + G
Sbjct: 62 LQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFG 121
Query: 109 HMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
H+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 HIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 168
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 60/137 (43%), Gaps = 36/137 (26%)
Query: 39 CYKCNNYGHFARECATESV---------------------TCYNCSGQGHVAKDCTVKSS 77
C+KC GH+AREC T CY C GH+AKDC ++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 78 I-ICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTC 133
+ CYNC GH A++C +R CY C + GH+A++C K C
Sbjct: 66 VEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK-----------C 114
Query: 134 YVCGHQGHLSYDCKLVQ 150
Y CG GH+ DC V+
Sbjct: 115 YSCGEFGHIQKDCTKVK 131
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 113 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 160
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 161 HLARECTIEAT 171
>gi|429862592|gb|ELA37234.1| zinc knuckle transcription factor [Colletotrichum gloeosporioides
Nara gc5]
Length = 460
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 68/151 (45%), Gaps = 22/151 (14%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC + GH +CPQ + R V I CY C GH R+C T + C NC
Sbjct: 258 KCNNCDELGHTAKACPQDPNEKVR---VTITCYNCGEEGHRVRDCPTPRIDKFACKNCGQ 314
Query: 65 QGHVAKDCTVKSS---IICYNCNSSGHFARNCPN--DSSKRCYACHQAGHMAKECPGQTA 119
H +CT S + C CN GHF R+CP + C+ C Q GH++KEC
Sbjct: 315 SRHKVSECTEPRSAEGVECNKCNEMGHFGRDCPTAGGGGRSCHNCGQEGHISKEC----- 369
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
EP L C C +GH S DC Q
Sbjct: 370 ---TEP---RKLKCRNCDEEGHHSRDCDKPQ 394
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 66/142 (46%), Gaps = 33/142 (23%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKV----------------------GIVCYKCN 43
TI CYNC + GH CP R DK G+ C KCN
Sbjct: 283 TITCYNCGEEGHRVRDCPT-----PRIDKFACKNCGQSRHKVSECTEPRSAEGVECNKCN 337
Query: 44 NYGHFARECATES---VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC--PNDSS 98
GHF R+C T +C+NC +GH++K+CT + C NC+ GH +R+C P D +
Sbjct: 338 EMGHFGRDCPTAGGGGRSCHNCGQEGHISKECTEPRKLKCRNCDEEGHHSRDCDKPQDVT 397
Query: 99 K-RCYACHQAGHMAKECPGQTA 119
+ +C C + GH +CP A
Sbjct: 398 RIKCMNCGEMGHKKYKCPNPPA 419
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQGH 67
C+NC GH + CP+ + C C GH R+C + C +C +GH
Sbjct: 45 CFNCGQDGHNKADCPEPAKP------FDGECKGCGQQGHMRRDCPDAPPMACRSCGEEGH 98
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPN 95
+ KDC K +C NC+ GH NC N
Sbjct: 99 IRKDCPNKPPEVCRNCHEEGHLVVNCEN 126
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 38 VCYKCNNYGHFARECATESVT----CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
C+ C GH +C + C C QGH+ +DC + C +C GH ++C
Sbjct: 44 ACFNCGQDGHNKADCPEPAKPFDGECKGCGQQGHMRRDCPDAPPMACRSCGEEGHIRKDC 103
Query: 94 PNDSSKRCYACHQAGHMAKEC 114
PN + C CH+ GH+ C
Sbjct: 104 PNKPPEVCRNCHEEGHLVVNC 124
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 11/101 (10%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYN 61
S ++C C + GH+ CP G C+ C GH ++EC + C N
Sbjct: 327 SAEGVECNKCNEMGHFGRDCPTAGGG-------GRSCHNCGQEGHISKECTEPRKLKCRN 379
Query: 62 CSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCPNDSSK 99
C +GH ++DC + I C NC GH CPN ++
Sbjct: 380 CDEEGHHSRDCDKPQDVTRIKCMNCGEMGHKKYKCPNPPAE 420
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 14/96 (14%)
Query: 59 CYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
C+NC GH DC + C C GH R+CP+ C +C + GH+ K+CP
Sbjct: 45 CFNCGQDGHNKADCPEPAKPFDGECKGCGQQGHMRRDCPDAPPMACRSCGEEGHIRKDCP 104
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
K PE C C +GHL +C+ +K
Sbjct: 105 ----NKPPE-------VCRNCHEEGHLVVNCENPRK 129
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 99 KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++C C + GH AK CP + P V +++TCY CG +GH DC
Sbjct: 257 QKCNNCDELGHTAKACP-----QDPNEKVRVTITCYNCGEEGHRVRDC 299
>gi|50550507|ref|XP_502726.1| YALI0D12056p [Yarrowia lipolytica]
gi|49648594|emb|CAG80914.1| YALI0D12056p [Yarrowia lipolytica CLIB122]
Length = 197
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE--SVTCYNCSGQG 66
C+NC +FGH +CP+ + VCY C N GH +R+C E C+ C+ G
Sbjct: 15 CFNCGEFGHQVRACPRVGNP---------VCYNCGNDGHMSRDCTEEPKEKACFKCNQPG 65
Query: 67 HVAKDCTVKSSII-------CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
H+ K+C +I+ N + P S CY C + GH A+ C A
Sbjct: 66 HILKECPQNDAIVHDGAAPVAPNGEAPIGGEFGAPRGPSGVCYKCGKPGHFARACRSVPA 125
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
G +P P + +CY CG QGHLS DC + QK
Sbjct: 126 GGAP-PKFGRTQSCYSCGGQGHLSKDCTVGQK 156
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 63/136 (46%), Gaps = 32/136 (23%)
Query: 9 CYNCFDFGHYQYSCPQKSS-------------ADARGDKVGI------VCYKCNNYGHFA 49
C+ C GH CPQ + G + G VCYKC GHFA
Sbjct: 58 CFKCNQPGHILKECPQNDAIVHDGAAPVAPNGEAPIGGEFGAPRGPSGVCYKCGKPGHFA 117
Query: 50 RECAT-----------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
R C + + +CY+C GQGH++KDCTV CYNC S GH ++ C S
Sbjct: 118 RACRSVPAGGAPPKFGRTQSCYSCGGQGHLSKDCTVGQK--CYNCGSMGHVSKECGEAQS 175
Query: 99 KRCYACHQAGHMAKEC 114
+ CY C + GH+A +C
Sbjct: 176 RVCYNCKKPGHIAIKC 191
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 12/68 (17%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSG 64
T CY+C GH C VG CY C + GH ++EC +S CYNC
Sbjct: 135 TQSCYSCGGQGHLSKDC-----------TVGQKCYNCGSMGHVSKECGEAQSRVCYNCKK 183
Query: 65 QGHVAKDC 72
GH+A C
Sbjct: 184 PGHIAIKC 191
>gi|224085782|ref|XP_002307695.1| predicted protein [Populus trichocarpa]
gi|222857144|gb|EEE94691.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 71/136 (52%), Gaps = 12/136 (8%)
Query: 11 NCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAK 70
N + G Y+ ++ D RG +C+ C GHFAREC +V C NC GHVA
Sbjct: 12 NSYRDGPYRRETHRERDRD-RGFSQTNLCHNCKRAGHFARECPNAAV-CNNCGLPGHVAS 69
Query: 71 DCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMS 130
+CT + + C+NC GH A NCPN+ C+AC ++GH AK+CP +PEP
Sbjct: 70 ECTTQ--LQCWNCREPGHVASNCPNEGI--CHACGRSGHRAKDCP------NPEPSPGDV 119
Query: 131 LTCYVCGHQGHLSYDC 146
C C GH + DC
Sbjct: 120 RLCNNCYKPGHFAADC 135
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 77/179 (43%), Gaps = 57/179 (31%)
Query: 4 TSTIQCYNCFDFGHYQYSCP---------------------QKSSADARGDKVGIVCYKC 42
T+ +QC+NC + GH +CP + S D R +C C
Sbjct: 72 TTQLQCWNCREPGHVASNCPNEGICHACGRSGHRAKDCPNPEPSPGDVR------LCNNC 125
Query: 43 NNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP-------- 94
GHFA +C T C NC GH+A+DC ++ +C CN SGH AR C
Sbjct: 126 YKPGHFAADC-TNDKACKNCRKTGHMARDC--QNEPVCNLCNISGHVARQCTRGNSFPDR 182
Query: 95 ----NDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+SS R C C+Q GHM+++C G + C+ CG +GH + +C
Sbjct: 183 GGWGRNSSYRDVICRTCNQVGHMSRDCIGPM------------IICHNCGGRGHRAIEC 229
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 68/156 (43%), Gaps = 29/156 (18%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDK--------VGIVCYKCNNYGHFARECATE 55
+ T C+NC GH+ CP + + G + C+ C GH A C E
Sbjct: 34 SQTNLCHNCKRAGHFARECPNAAVCNNCGLPGHVASECTTQLQCWNCREPGHVASNCPNE 93
Query: 56 SVTCYNCSGQGHVAKDC-----TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
+ C+ C GH AKDC + +C NC GHFA +C ND K C C + GHM
Sbjct: 94 GI-CHACGRSGHRAKDCPNPEPSPGDVRLCNNCYKPGHFAADCTND--KACKNCRKTGHM 150
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
A++C EPV C +C GH++ C
Sbjct: 151 ARDCQN-------EPV------CNLCNISGHVARQC 173
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 54/122 (44%), Gaps = 28/122 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NC+ GH+ +AD DK C C GH AR+C E V C C+ GHV
Sbjct: 122 CNNCYKPGHF--------AADCTNDKA---CKNCRKTGHMARDCQNEPV-CNLCNISGHV 169
Query: 69 AKDCTVKSS---------------IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKE 113
A+ CT +S +IC CN GH +R+C C+ C GH A E
Sbjct: 170 ARQCTRGNSFPDRGGWGRNSSYRDVICRTCNQVGHMSRDCIGPMII-CHNCGGRGHRAIE 228
Query: 114 CP 115
CP
Sbjct: 229 CP 230
>gi|348502965|ref|XP_003439037.1| PREDICTED: cellular nucleic acid-binding protein-like [Oreochromis
niloticus]
Length = 166
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVG----IVCYKCNNYGHFARECATES 56
M +S +C+ C GH+ CP S + RG G + CY+C + GH AR+C
Sbjct: 1 MEMSSNSECFGCGRSGHWVKHCPNASGSRGRGRGRGRGKELFCYRCGDQGHMARDCDQTE 60
Query: 57 VTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKE 113
CYNC GH+++DC + +CY C +GH AR+C + + ++CY+C GH+ K
Sbjct: 61 DACYNCHRSGHISRDCKEPKKEREQLCYTCGKAGHMARDCDHANEQKCYSCGGFGHIQKL 120
Query: 114 CP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
C G+ + CY CG GHL+ +C +
Sbjct: 121 CDKVKCYRCGEIGHVAVHCSKASETNCYNCGKAGHLAKECTI 162
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 60/129 (46%), Gaps = 29/129 (22%)
Query: 39 CYKCNNYGHFARECAT--------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCN 84
C+ C GH+ + C + + CY C QGH+A+DC ++ CYNC+
Sbjct: 9 CFGCGRSGHWVKHCPNASGSRGRGRGRGRGKELFCYRCGDQGHMARDCD-QTEDACYNCH 67
Query: 85 SSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGH 141
SGH +R+C +R CY C +AGHMA++C K CY CG GH
Sbjct: 68 RSGHISRDCKEPKKEREQLCYTCGKAGHMARDCDHANEQK-----------CYSCGGFGH 116
Query: 142 LSYDCKLVQ 150
+ C V+
Sbjct: 117 IQKLCDKVK 125
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT-CYNCSGQG 66
+CY+C FGH Q C + + CY+C GH A C+ S T CYNC G
Sbjct: 107 KCYSCGGFGHIQKLCDK------------VKCYRCGEIGHVAVHCSKASETNCYNCGKAG 154
Query: 67 HVAKDCTVKSS 77
H+AK+CT++++
Sbjct: 155 HLAKECTIEAT 165
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 25/92 (27%)
Query: 74 VKSSIICYNCNSSGHFARNCPNDSSKR-------------CYACHQAGHMAKECPGQTAG 120
+ S+ C+ C SGH+ ++CPN S R CY C GHMA++C
Sbjct: 3 MSSNSECFGCGRSGHWVKHCPNASGSRGRGRGRGRGKELFCYRCGDQGHMARDCD----- 57
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
CY C GH+S DCK +K
Sbjct: 58 -------QTEDACYNCHRSGHISRDCKEPKKE 82
>gi|225458095|ref|XP_002279453.1| PREDICTED: zinc finger protein GIS2-like isoform 1 [Vitis vinifera]
Length = 254
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 69/116 (59%), Gaps = 11/116 (9%)
Query: 31 RGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFA 90
RG G +C C GHFAREC ++ C NC+ GH+A +CT +S +C+NC GH A
Sbjct: 43 RGFSQGNLCNNCKRPGHFARECPNVAI-CNNCNLPGHIASECTTQS--LCWNCREPGHMA 99
Query: 91 RNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
NCPN+ C++C++ GH A++CP T G P D+ L C C QGH++ DC
Sbjct: 100 SNCPNEGI--CHSCNKTGHRARDCP--TPGL---PSGDLRL-CNNCYKQGHIAADC 147
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 75/156 (48%), Gaps = 27/156 (17%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------ 57
T+ C+NC + GH +CP + +C+ CN GH AR+C T +
Sbjct: 84 TTQSLCWNCREPGHMASNCPNEG-----------ICHSCNKTGHRARDCPTPGLPSGDLR 132
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP-- 115
C NC QGH+A DCT + C NC +GH AR+C N+ C C+ AGH+A++CP
Sbjct: 133 LCNNCYKQGHIAADCTNDKA--CKNCRKTGHIARDCQNEPV--CNLCNIAGHVARQCPKA 188
Query: 116 ---GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
G+ G + C C GH+S DC +
Sbjct: 189 EIFGERGGGGRNTGF-RDVICRSCNQVGHMSRDCMV 223
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 32/144 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NC GH+ CP + +C CN GH A EC T+S+ C+NC GH+
Sbjct: 51 CNNCKRPGHFARECPNVA-----------ICNNCNLPGHIASECTTQSL-CWNCREPGHM 98
Query: 69 AKDCTVKSSIICYNCNSSGHFARNC-----PNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
A +C + IC++CN +GH AR+C P+ + C C++ GH+A +C A
Sbjct: 99 ASNCPNEG--ICHSCNKTGHRARDCPTPGLPSGDLRLCNNCYKQGHIAADCTNDKA---- 152
Query: 124 EPVVDMSLTCYVCGHQGHLSYDCK 147
C C GH++ DC+
Sbjct: 153 ---------CKNCRKTGHIARDCQ 167
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 59/140 (42%), Gaps = 29/140 (20%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
+ S C NC+ GH +AD DK C C GH AR+C E V C
Sbjct: 126 LPSGDLRLCNNCYKQGHI--------AADCTNDKA---CKNCRKTGHIARDCQNEPV-CN 173
Query: 61 NCSGQGHVAKDC---------------TVKSSIICYNCNSSGHFARNCPNDSSKRCYACH 105
C+ GHVA+ C T +IC +CN GH +R+C S C C
Sbjct: 174 LCNIAGHVARQCPKAEIFGERGGGGRNTGFRDVICRSCNQVGHMSRDC-MVSLVICNNCG 232
Query: 106 QAGHMAKECP-GQTAGKSPE 124
GHMA ECP G+ + P
Sbjct: 233 GRGHMAFECPSGRFMDRMPR 252
>gi|348570490|ref|XP_003471030.1| PREDICTED: cellular nucleic acid-binding protein-like [Cavia
porcellus]
Length = 169
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 24/166 (14%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGI------------VCYKCNNYGHFAREC 52
S +C+ C GH+ CP K A RG + +CY+C GH+A+ C
Sbjct: 2 SGKECFKCGRNGHWARECP-KGGARQRGFRSSDSGPQCSSASQSDICYRCGAAGHYAKNC 60
Query: 53 ATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
+ + CY+C GH+AKDC + CY C+ GH AR+C ++CY C ++GH
Sbjct: 61 DLQDI-CYSCGKSGHIAKDCPEPKQQKEQCCYTCSRPGHLARDCDQRKVQKCYTCGESGH 119
Query: 110 MAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+ K+C G+T + + CY CG GH++ +C +
Sbjct: 120 IQKDCAQVRCYRCGETGHMAMSCNKASEVNCYRCGEAGHIARECTV 165
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 66/139 (47%), Gaps = 37/139 (26%)
Query: 36 GIVCYKCNNYGHFAREC---------------------ATESVTCYNCSGQGHVAKDCTV 74
G C+KC GH+AREC A++S CY C GH AK+C +
Sbjct: 3 GKECFKCGRNGHWARECPKGGARQRGFRSSDSGPQCSSASQSDICYRCGAAGHYAKNCDL 62
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSL 131
+ ICY+C SGH A++CP ++ CY C + GH+A++C + K
Sbjct: 63 QD--ICYSCGKSGHIAKDCPEPKQQKEQCCYTCSRPGHLARDCDQRKVQK---------- 110
Query: 132 TCYVCGHQGHLSYDCKLVQ 150
CY CG GH+ DC V+
Sbjct: 111 -CYTCGESGHIQKDCAQVR 128
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES-VTCYNCSGQG 66
+CY C + GH Q C Q + CY+C GH A C S V CY C G
Sbjct: 110 KCYTCGESGHIQKDCAQ------------VRCYRCGETGHMAMSCNKASEVNCYRCGEAG 157
Query: 67 HVAKDCTVKSS 77
H+A++CTV+++
Sbjct: 158 HIARECTVEAT 168
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 9/54 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT 58
+ ++CY C + GH SC + S + CY+C GH AREC E+
Sbjct: 125 AQVRCYRCGETGHMAMSCNKASE---------VNCYRCGEAGHIARECTVEATA 169
>gi|354622941|ref|NP_001135177.2| zinc finger protein 9 [Salmo salar]
gi|221219922|gb|ACM08622.1| Cellular nucleic acid-binding protein [Salmo salar]
gi|221219978|gb|ACM08650.1| Cellular nucleic acid-binding protein [Salmo salar]
Length = 164
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKV---GIVCYKCNNYGHFARECATESVTC 59
S+ +C+ C GH+ +CP+ + + CY+C GH AR+C C
Sbjct: 2 EMSSSECFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDAC 61
Query: 60 YNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP- 115
YNC GH+++DC + CY+C +GH AR+C + + ++CY+C GH+ K C
Sbjct: 62 YNCHRSGHISRDCKEPKKEREQCCYSCGKAGHVARDCDHANEQKCYSCGGFGHIQKLCDK 121
Query: 116 ------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
G+ + + + CY CG+ GHL+ +C +
Sbjct: 122 VKCYRCGEIGHVAVQCSKASEVNCYKCGNTGHLAKECTI 160
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 28/128 (21%)
Query: 39 CYKCNNYGHFAREC-------------ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNS 85
C++C GH+ + C + + CY C QGH+A+DC ++ CYNC+
Sbjct: 8 CFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHIARDCE-QTEDACYNCHR 66
Query: 86 SGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHL 142
SGH +R+C +R CY+C +AGH+A++C K CY CG GH+
Sbjct: 67 SGHISRDCKEPKKEREQCCYSCGKAGHVARDCDHANEQK-----------CYSCGGFGHI 115
Query: 143 SYDCKLVQ 150
C V+
Sbjct: 116 QKLCDKVK 123
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES-VTCYNCSGQG 66
+CY+C FGH Q C + + CY+C GH A +C+ S V CY C G
Sbjct: 105 KCYSCGGFGHIQKLCDK------------VKCYRCGEIGHVAVQCSKASEVNCYKCGNTG 152
Query: 67 HVAKDCTVKSS 77
H+AK+CT++++
Sbjct: 153 HLAKECTIEAT 163
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 24/89 (26%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR------------CYACHQAGHMAKECPGQTAGKSP 123
SS C+ C GH+ +NCP + CY C + GH+A++C
Sbjct: 4 SSSECFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHIARDC--------- 54
Query: 124 EPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
E D CY C GH+S DCK +K
Sbjct: 55 EQTED---ACYNCHRSGHISRDCKEPKKE 80
>gi|408398051|gb|EKJ77187.1| hypothetical protein FPSE_02637 [Fusarium pseudograminearum CS3096]
Length = 435
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 69/149 (46%), Gaps = 18/149 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSGQ 65
C NC + GH C Q+ G K I CY C GH R+C + C NC
Sbjct: 244 CNNCKELGHVSKFCTQEKMERTDGPK--ISCYNCGADGHRVRDCPEPRIDKNACKNCGKS 301
Query: 66 GHVAKDCTVK---SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKS 122
GH DC +++ C C+ GHFA++CP + C C Q GHMAKEC
Sbjct: 302 GHKVADCEEPPNPANVECRKCSEVGHFAKDCPQGGGRACRNCGQEGHMAKEC-------- 353
Query: 123 PEPVVDMS-LTCYVCGHQGHLSYDCKLVQ 150
+ DMS +TC C QGH S +C L +
Sbjct: 354 -DQPRDMSTVTCRNCEQQGHYSKECPLPR 381
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 61/153 (39%), Gaps = 22/153 (14%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE----SV 57
+ I CYNC GH CP+ R DK C C GH +C +V
Sbjct: 265 TDGPKISCYNCGADGHRVRDCPE-----PRIDKN--ACKNCGKSGHKVADCEEPPNPANV 317
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC--PND-SSKRCYACHQAGHMAKEC 114
C CS GH AKDC C NC GH A+ C P D S+ C C Q GH +KEC
Sbjct: 318 ECRKCSEVGHFAKDCPQGGGRACRNCGQEGHMAKECDQPRDMSTVTCRNCEQQGHYSKEC 377
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
P P + C C GH CK
Sbjct: 378 --------PLPRDWSKVQCSNCQEYGHTKVRCK 402
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Query: 39 CYKCNNYGHFARECAT-ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
C+ C GH EC + + C C +GH+ KDC ++C NC GHF ++C +
Sbjct: 53 CFGCGEIGHRRAECPNPQEMACRYCKKEGHMRKDCPEAPPMVCENCGEEGHFRKHC--EK 110
Query: 98 SKRCYACHQAG---HMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSY 144
++ H A +A E Q ++ YV G +G ++Y
Sbjct: 111 PRKINRDHIADVHPEVAWEKIKQAVADRDVDDAKEAVNEYVKGIEGEITY 160
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
C+ C GH CPN C C + GHM K+CP ++P + C CG +
Sbjct: 53 CFGCGEIGHRRAECPNPQEMACRYCKKEGHMRKDCP-----EAP------PMVCENCGEE 101
Query: 140 GHLSYDCKLVQK 151
GH C+ +K
Sbjct: 102 GHFRKHCEKPRK 113
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 46/122 (37%), Gaps = 16/122 (13%)
Query: 33 DKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARN 92
DK V Y+ RE T + A + + +C NC GH ++
Sbjct: 197 DKKYTVSYRFVEKADRPREIEGWPKTREELLERLDDAGEIVDRGLPLCNNCKELGHVSKF 256
Query: 93 CPNDSSKR-------CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYD 145
C + +R CY C GH ++C PEP +D + C CG GH D
Sbjct: 257 CTQEKMERTDGPKISCYNCGADGHRVRDC--------PEPRIDKN-ACKNCGKSGHKVAD 307
Query: 146 CK 147
C+
Sbjct: 308 CE 309
>gi|427788709|gb|JAA59806.1| Putative protein self-association [Rhipicephalus pulchellus]
Length = 856
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 23/161 (14%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---------C 59
C+ C + GH CP S+ G G C+KC GH +R+C + C
Sbjct: 205 CFKCGEEGHMSRDCPNADSSSGGGRSGGRGCFKCGQEGHMSRDCPNSDSSGGGGGGGRGC 264
Query: 60 YNCSGQGHVAKDCTVKSSII-----CYNCNSSGHFARNCPNDSSKR----CYACHQAGHM 110
+ C +GH+++DC SS C+NC GH +R+CPN +R C+ C + GHM
Sbjct: 265 FKCGEEGHMSRDCPTASSDDRPKRGCFNCGEDGHMSRDCPNPQQERRSKGCFKCGEEGHM 324
Query: 111 AKECPGQTAGKSPEPVV-----DMSLTCYVCGHQGHLSYDC 146
+++CP AG D C+ C +GH++ DC
Sbjct: 325 SRDCPNPDAGGGRGGDTSGEGGDRPRGCFKCQQEGHMAKDC 365
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 70/161 (43%), Gaps = 32/161 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT----------ESVT 58
C+ C GH CP S G C+KC GH +R+C
Sbjct: 177 CFKCNQEGHMSRDCPNADSGGGG--GRGRGCFKCGEEGHMSRDCPNADSSSGGGRSGGRG 234
Query: 59 CYNCSGQGHVAKDCTVKSS--------IICYNCNSSGHFARNCP----NDSSKR-CYACH 105
C+ C +GH+++DC S C+ C GH +R+CP +D KR C+ C
Sbjct: 235 CFKCGQEGHMSRDCPNSDSSGGGGGGGRGCFKCGEEGHMSRDCPTASSDDRPKRGCFNCG 294
Query: 106 QAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ GHM+++CP + S C+ CG +GH+S DC
Sbjct: 295 EDGHMSRDCPNPQQERR-------SKGCFKCGEEGHMSRDC 328
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 31/141 (21%)
Query: 36 GIVCYKCNNYGHFARECAT--------ESVTCYNCSGQGHVAKDC---------TVKSSI 78
G C+KCN GH +R+C C+ C +GH+++DC
Sbjct: 174 GRACFKCNQEGHMSRDCPNADSGGGGGRGRGCFKCGEEGHMSRDCPNADSSSGGGRSGGR 233
Query: 79 ICYNCNSSGHFARNCPN-DSS-------KRCYACHQAGHMAKECPGQTAGKSPEPVVDMS 130
C+ C GH +R+CPN DSS + C+ C + GHM+++CP ++ P+
Sbjct: 234 GCFKCGQEGHMSRDCPNSDSSGGGGGGGRGCFKCGEEGHMSRDCPTASSDDRPK------ 287
Query: 131 LTCYVCGHQGHLSYDCKLVQK 151
C+ CG GH+S DC Q+
Sbjct: 288 RGCFNCGEDGHMSRDCPNPQQ 308
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 29/115 (25%)
Query: 9 CYNCFDFGHYQYSCPQKSSAD--ARGDKVGIVCYKCNNYGHFARECAT-----ESVTCYN 61
C+ C + GH CP SS D RG C+ C GH +R+C S C+
Sbjct: 264 CFKCGEEGHMSRDCPTASSDDRPKRG------CFNCGEDGHMSRDCPNPQQERRSKGCFK 317
Query: 62 CSGQGHVAKDCTVKSSII----------------CYNCNSSGHFARNCPNDSSKR 100
C +GH+++DC + C+ C GH A++C N+ R
Sbjct: 318 CGEEGHMSRDCPNPDAGGGRGGDTSGEGGDRPRGCFKCQQEGHMAKDCTNEPVPR 372
>gi|46137255|ref|XP_390319.1| hypothetical protein FG10143.1 [Gibberella zeae PH-1]
Length = 434
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 67/146 (45%), Gaps = 16/146 (10%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSGQ 65
C NC + GH C Q+ G K I CY C GH R+C V C NC
Sbjct: 244 CSNCRELGHISKFCTQEKMERTDGPK--ISCYNCGADGHRVRDCPEPRVDKNACKNCGKS 301
Query: 66 GHVAKDCTVK---SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKS 122
GH DC +++ C C+ GHFA++CP + C C Q GHMAKEC
Sbjct: 302 GHKVVDCEEPPNPANVECRKCSEVGHFAKDCPQGGGRACRNCGQEGHMAKEC-------- 353
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDCKL 148
+P ++TC C QGH S +C L
Sbjct: 354 DQPRDMSTVTCRNCEQQGHYSKECPL 379
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 61/153 (39%), Gaps = 22/153 (14%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE----SV 57
+ I CYNC GH CP+ R DK C C GH +C +V
Sbjct: 265 TDGPKISCYNCGADGHRVRDCPE-----PRVDKN--ACKNCGKSGHKVVDCEEPPNPANV 317
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC--PND-SSKRCYACHQAGHMAKEC 114
C CS GH AKDC C NC GH A+ C P D S+ C C Q GH +KEC
Sbjct: 318 ECRKCSEVGHFAKDCPQGGGRACRNCGQEGHMAKECDQPRDMSTVTCRNCEQQGHYSKEC 377
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
P P + C C GH CK
Sbjct: 378 --------PLPRDWSKVQCSNCQEYGHTKVRCK 402
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 39 CYKCNNYGHFARECAT-ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
C+ C GH EC + + C C +GH+ KDC ++C NC GHF ++C
Sbjct: 53 CFGCGEIGHRRAECPNPQEMACRYCKKEGHMRKDCPEAPPMVCENCGEEGHFRKHC 108
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
C+ C GH CPN C C + GHM K+CP ++P + C CG +
Sbjct: 53 CFGCGEIGHRRAECPNPQEMACRYCKKEGHMRKDCP-----EAP------PMVCENCGEE 101
Query: 140 GHLSYDCKLVQK 151
GH C+ +K
Sbjct: 102 GHFRKHCEKPRK 113
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 46/122 (37%), Gaps = 16/122 (13%)
Query: 33 DKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARN 92
DK V Y+ RE T + A + + +C NC GH ++
Sbjct: 197 DKKYTVSYRFVEKADRPREIEGWPKTREELLERLDDAGEIVDRGLPLCSNCRELGHISKF 256
Query: 93 CPNDSSKR-------CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYD 145
C + +R CY C GH ++C PEP VD + C CG GH D
Sbjct: 257 CTQEKMERTDGPKISCYNCGADGHRVRDC--------PEPRVDKN-ACKNCGKSGHKVVD 307
Query: 146 CK 147
C+
Sbjct: 308 CE 309
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 23/56 (41%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
C+ C GH +C + C C GH ++CP C C + GH K C
Sbjct: 53 CFGCGEIGHRRAECPNPQEMACRYCKKEGHMRKDCPEAPPMVCENCGEEGHFRKHC 108
>gi|342887520|gb|EGU87002.1| hypothetical protein FOXB_02396 [Fusarium oxysporum Fo5176]
Length = 457
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 69/145 (47%), Gaps = 17/145 (11%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSGQ 65
C NC + GH C Q+ + R D V I C+ C GH R+C V C NC
Sbjct: 253 CLNCKELGHISKFCTQEKTE--RSDAVKISCFNCGADGHRVRDCPEPRVDKNACKNCGKS 310
Query: 66 GHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAGK 121
GH A DC +++ C CN GHFA++CP R C C Q GH++K+C
Sbjct: 311 GHRAADCEEPPNPANVECRKCNEMGHFAKDCPQGGGSRACRNCGQEGHISKDC------- 363
Query: 122 SPEPVVDMSLTCYVCGHQGHLSYDC 146
+P ++TC C QGH S +C
Sbjct: 364 -DQPRDMSTVTCRNCEKQGHFSREC 387
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 59/127 (46%), Gaps = 23/127 (18%)
Query: 33 DKVGIVCYKCNNYGHFARECATES--------VTCYNCSGQGHVAKDCTVK--SSIICYN 82
D+ +C C GH ++ C E ++C+NC GH +DC C N
Sbjct: 247 DRGVPLCLNCKELGHISKFCTQEKTERSDAVKISCFNCGADGHRVRDCPEPRVDKNACKN 306
Query: 83 CNSSGHFARNC---PNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
C SGH A +C PN ++ C C++ GH AK+CP Q G S C CG +
Sbjct: 307 CGKSGHRAADCEEPPNPANVECRKCNEMGHFAKDCP-QGGG---------SRACRNCGQE 356
Query: 140 GHLSYDC 146
GH+S DC
Sbjct: 357 GHISKDC 363
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 62/138 (44%), Gaps = 25/138 (18%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKS---------------SAD--ARGDKVGIVCYKCNN 44
S I C+NC GH CP+ +AD + + C KCN
Sbjct: 274 SDAVKISCFNCGADGHRVRDCPEPRVDKNACKNCGKSGHRAADCEEPPNPANVECRKCNE 333
Query: 45 YGHFARECATE--SVTCYNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCPN--DS 97
GHFA++C S C NC +GH++KDC S++ C NC GHF+R CP D
Sbjct: 334 MGHFAKDCPQGGGSRACRNCGQEGHISKDCDQPRDMSTVTCRNCEKQGHFSRECPEPKDW 393
Query: 98 SK-RCYACHQAGHMAKEC 114
SK +C C + GH C
Sbjct: 394 SKVQCSNCQEYGHTKVRC 411
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 15/91 (16%)
Query: 63 SGQGHVAKDCTVKSSIICYNCNSSG--HFARNCPNDSSKRCYACHQAGHMAKECPGQTAG 120
+G G V + T C+ C +G H CPN C C Q GHM KECP
Sbjct: 45 NGDGFVGEQPTGNEK--CFGCGETGFSHRRAECPNPQEMTCRFCKQPGHMIKECP----D 98
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
K P + C CG +GH+ +C+ +K
Sbjct: 99 KPP-------MICENCGDEGHMRKNCEKPRK 122
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 39 CYKCNNYG--HFARECAT-ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
C+ C G H EC + +TC C GH+ K+C K +IC NC GH +NC
Sbjct: 60 CFGCGETGFSHRRAECPNPQEMTCRFCKQPGHMIKECPDKPPMICENCGDEGHMRKNC 117
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Query: 43 NNYGHFARECATESVTCYNCSGQG--HVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR 100
+N F E T + C+ C G H +C + C C GH + CP+
Sbjct: 44 DNGDGFVGEQPTGNEKCFGCGETGFSHRRAECPNPQEMTCRFCKQPGHMIKECPDKPPMI 103
Query: 101 CYACHQAGHMAKEC 114
C C GHM K C
Sbjct: 104 CENCGDEGHMRKNC 117
>gi|317137775|ref|XP_001727944.2| cellular nucleic acid-binding protein [Aspergillus oryzae RIB40]
Length = 171
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 61/120 (50%), Gaps = 15/120 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADA-RGDKVGIVCYKCNNYGHFARECATESV---------- 57
CY C GH CPQ S D G G CYKC + GH AR C+
Sbjct: 53 CYRCSGVGHISRDCPQAPSGDGYSGATGGQECYKCGHVGHIARNCSQGGYSGDGYGGRQH 112
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS--SKRCYACHQAGHMAKECP 115
TCY+C G GH+A+DCT CYNC GH +R+CP+++ + CY C Q GH+ CP
Sbjct: 113 TCYSCGGHGHMARDCT--HGQKCYNCGEVGHVSRDCPSEARGERVCYKCKQPGHVQAACP 170
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 65/128 (50%), Gaps = 14/128 (10%)
Query: 36 GIVCYKCNNYGHFARECATESV-TCYNCSGQGHVAKDCTV-KSSIICYNCNSSGHFARNC 93
G C+ C + H AR+C + TCYNC GQGHV+++CTV CY C+ GH +R+C
Sbjct: 7 GRGCFNCGDASHQARDCPKKGTPTCYNCGGQGHVSRECTVAPKEKPCYRCSGVGHISRDC 66
Query: 94 PNDSS----------KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLS 143
P S + CY C GH+A+ C G S + TCY CG GH++
Sbjct: 67 PQAPSGDGYSGATGGQECYKCGHVGHIARNC--SQGGYSGDGYGGRQHTCYSCGGHGHMA 124
Query: 144 YDCKLVQK 151
DC QK
Sbjct: 125 RDCTHGQK 132
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 69/183 (37%), Gaps = 58/183 (31%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYN 61
T C+NC D H CP+K + CY C GH +REC A + CY
Sbjct: 5 TRGRGCFNCGDASHQARDCPKKGTP---------TCYNCGGQGHVSRECTVAPKEKPCYR 55
Query: 62 CSGQGHVAKDCTVKSS----------IICYNCNSSGHFARNCPNDS-------------- 97
CSG GH+++DC S CY C GH ARNC
Sbjct: 56 CSGVGHISRDCPQAPSGDGYSGATGGQECYKCGHVGHIARNCSQGGYSGDGYGGRQHTCY 115
Query: 98 --------------SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLS 143
++CY C + GH++++CP + G+ CY C GH+
Sbjct: 116 SCGGHGHMARDCTHGQKCYNCGEVGHVSRDCPSEARGE---------RVCYKCKQPGHVQ 166
Query: 144 YDC 146
C
Sbjct: 167 AAC 169
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYN 61
+T +CY C GH +C Q + CY C +GH AR+C T CYN
Sbjct: 77 GATGGQECYKCGHVGHIARNCSQGGYSGDGYGGRQHTCYSCGGHGHMARDC-THGQKCYN 135
Query: 62 CSGQGHVAKDCT--VKSSIICYNCNSSGHFARNCPN 95
C GHV++DC + +CY C GH CPN
Sbjct: 136 CGEVGHVSRDCPSEARGERVCYKCKQPGHVQAACPN 171
>gi|301788510|ref|XP_002929671.1| PREDICTED: cellular nucleic acid-binding protein-like [Ailuropoda
melanoleuca]
Length = 206
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 22/169 (13%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSA------------DARGDKVGIVCYKCNNYGHFA 49
++ S+ +C+ GH+ CP+ + + + +CY+C GH A
Sbjct: 34 AAMSSNECFKGGWSGHWARGCPRAGGSRGRGARGRGRASPSSSTNLPDICYRCGESGHHA 93
Query: 50 RECATESVTCYNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCPNDSSKRCYACHQ 106
++C CYNC GH+AKDC + S CY C GH AR+C +CY+C +
Sbjct: 94 KDCDFLEALCYNCGRSGHIAKDCIERKRESEQCCYTCGRPGHLARDCDRQEEPKCYSCGE 153
Query: 107 AGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
GH+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 154 YGHIQKDCSQVKCYRCGETGHMAINCSKTSEVNCYRCGESGHLARECPM 202
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CY C GH C ++ CY C YGH ++C+ V CY C GH+
Sbjct: 127 CYTCGRPGHLARDCDRQEEPK---------CYSCGEYGHIQKDCS--QVKCYRCGETGHM 175
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
A +C+ S + CY C SGH AR CP +++
Sbjct: 176 AINCSKTSEVNCYRCGESGHLARECPMEAT 205
>gi|224080454|ref|XP_002306137.1| predicted protein [Populus trichocarpa]
gi|222849101|gb|EEE86648.1| predicted protein [Populus trichocarpa]
Length = 242
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 65/109 (59%), Gaps = 11/109 (10%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
+C C GH+AREC ++ C+NC GH+A +CT KS +C+NC GH A NCPN+
Sbjct: 38 LCKNCKRPGHYARECPNVAI-CHNCGLPGHIASECTTKS--LCWNCREPGHMASNCPNEG 94
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C+ C +AGH AKEC TA P P D+ L C C QGH++ DC
Sbjct: 95 I--CHTCGKAGHRAKEC---TA--PPMPPGDLRL-CNNCYKQGHIAADC 135
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 72/154 (46%), Gaps = 28/154 (18%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------ 57
T+ C+NC + GH +CP + +C+ C GH A+EC +
Sbjct: 72 TTKSLCWNCREPGHMASNCPNEG-----------ICHTCGKAGHRAKECTAPPMPPGDLR 120
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP-- 115
C NC QGH+A DCT + C NC +GH AR CPN+ C C+ AGH+A++CP
Sbjct: 121 LCNNCYKQGHIAADCTNDKA--CNNCRKTGHLARECPNEPI--CNMCNVAGHVARQCPKS 176
Query: 116 ---GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G G D + C C GH+S DC
Sbjct: 177 NMLGDRGGMRSGGYQD--IVCRNCHQYGHMSRDC 208
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
M C NC+ GH +AD DK C C GH AREC E + C
Sbjct: 114 MPPGDLRLCNNCYKQGHI--------AADCTNDKA---CNNCRKTGHLARECPNEPI-CN 161
Query: 61 NCSGQGHVAKDCTVKS--------------SIICYNCNSSGHFARNCPNDSSKRCYACHQ 106
C+ GHVA+ C + I+C NC+ GH +R+C C+ C
Sbjct: 162 MCNVAGHVARQCPKSNMLGDRGGMRSGGYQDIVCRNCHQYGHMSRDCMGPLMI-CHNCGG 220
Query: 107 AGHMAKECP-GQTAGKSPE 124
GH A ECP G+ + P+
Sbjct: 221 RGHRAIECPSGRMMDRYPQ 239
>gi|197632623|gb|ACH71035.1| zinc finger protein 9-2 [Salmo salar]
Length = 162
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 13/158 (8%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKV---GIVCYKCNNYGHFARECATESVTCY 60
S+ +C+ C GH+ +CP+ + + CY+C GH AR+C CY
Sbjct: 1 MSSSECFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACY 60
Query: 61 NCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP-- 115
NC GH+++DC + CY+C +GH AR+C + + ++CY+C GH+ K C
Sbjct: 61 NCHRSGHISRDCKEPKKEREQCCYSCGKAGHVARDCDHANEQKCYSCGGFGHIQKLCDKV 120
Query: 116 -----GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
G+ + + + CY CG+ GHL+ +C +
Sbjct: 121 KCYRCGEIGHVAVQCSKASEVNCYKCGNTGHLAKECTI 158
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 28/128 (21%)
Query: 39 CYKCNNYGHFAREC-------------ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNS 85
C++C GH+ + C + + CY C QGH+A+DC ++ CYNC+
Sbjct: 6 CFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHIARDCE-QTEDACYNCHR 64
Query: 86 SGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHL 142
SGH +R+C +R CY+C +AGH+A++C K CY CG GH+
Sbjct: 65 SGHISRDCKEPKKEREQCCYSCGKAGHVARDCDHANEQK-----------CYSCGGFGHI 113
Query: 143 SYDCKLVQ 150
C V+
Sbjct: 114 QKLCDKVK 121
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES-VTCYNCSGQG 66
+CY+C FGH Q C + + CY+C GH A +C+ S V CY C G
Sbjct: 103 KCYSCGGFGHIQKLCDK------------VKCYRCGEIGHVAVQCSKASEVNCYKCGNTG 150
Query: 67 HVAKDCTVKSS 77
H+AK+CT++++
Sbjct: 151 HLAKECTIEAT 161
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 24/89 (26%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR------------CYACHQAGHMAKECPGQTAGKSP 123
SS C+ C GH+ +NCP + CY C + GH+A++C
Sbjct: 2 SSSECFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHIARDC--------- 52
Query: 124 EPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
E D CY C GH+S DCK +K
Sbjct: 53 EQTED---ACYNCHRSGHISRDCKEPKKE 78
>gi|116201047|ref|XP_001226335.1| hypothetical protein CHGG_08408 [Chaetomium globosum CBS 148.51]
gi|88176926|gb|EAQ84394.1| hypothetical protein CHGG_08408 [Chaetomium globosum CBS 148.51]
Length = 222
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
+T QCY+C GH Q CP + G G CY C++ GH AR C V
Sbjct: 47 TTKAKQCYHCQGLGHVQAECP---TLRLSGAGAGNRCYNCDSIGHLARNCPNPPVPGAGR 103
Query: 63 SGQGHVAKDCTVKSSII-------CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
G V+ + CY C HFAR+C + +CYAC + GH++++C
Sbjct: 104 GGMVPRGGFAPVRGGFVGGPRPATCYKCGGPNHFARDC-QAQAMKCYACGKLGHISRDCT 162
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G P+ TCY CG GH+S DC
Sbjct: 163 APNGG----PLNTAGKTCYQCGEAGHISRDC 189
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 32/148 (21%)
Query: 8 QCYNCFDFGHYQYSCPQKSS--------------ADARGDKVG----IVCYKCNNYGHFA 49
+CYNC GH +CP A RG VG CYKC HFA
Sbjct: 79 RCYNCDSIGHLARNCPNPPVPGAGRGGMVPRGGFAPVRGGFVGGPRPATCYKCGGPNHFA 138
Query: 50 RECATESVTCYNCSGQGHVAKDCTVK-------SSIICYNCNSSGHFARNCPNDSSKRCY 102
R+C +++ CY C GH+++DCT + CY C +GH +R+C N +
Sbjct: 139 RDCQAQAMKCYACGKLGHISRDCTAPNGGPLNTAGKTCYQCGEAGHISRDCANKAGP--- 195
Query: 103 ACHQAGHMAKECPGQTAGKSPEPVVDMS 130
G M E A P+PV ++
Sbjct: 196 ----IGEMQPEVEMAGAPVMPQPVAPLA 219
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S CY C GH A C + CY C Q H + ECP P + CY
Sbjct: 5 SRRACYKCGELGHHAEAC-ASPHRLCYNCKQPNHESNECP--------MPRTTKAKQCYH 55
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ +C ++ S
Sbjct: 56 CQGLGHVQAECPTLRLS 72
>gi|403413797|emb|CCM00497.1| predicted protein [Fibroporia radiculosa]
Length = 178
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 62/133 (46%), Gaps = 19/133 (14%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSA--DARGDKVGIVCYKCNNYGHFARECATE--- 55
S T CY C GH CP ++A A G CY+C GH AR C
Sbjct: 42 TSETKAKACYRCGQEGHISRDCPDAANAPPGAIGGASTTECYRCGKTGHIARTCPDAASG 101
Query: 56 ------------SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYA 103
S TCY C G GH+++DC S CYNC+ GH +R+CP + CY
Sbjct: 102 GGYGGGGGGNFGSKTCYTCGGVGHLSRDCVQGSK--CYNCSGVGHISRDCPQPQRRACYT 159
Query: 104 CHQAGHMAKECPG 116
C GH++++CPG
Sbjct: 160 CGSEGHISRDCPG 172
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 77/179 (43%), Gaps = 50/179 (27%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT--CYNCSGQG 66
C+NC FGH +CP+ + CY C GH ++EC +E+ CY C +G
Sbjct: 7 CFNCGGFGHQAANCPKAGTP---------TCYNCGLEGHVSKECTSETKAKACYRCGQEG 57
Query: 67 HVAKDCT-----------VKSSIICYNCNSSGHFARNCP--------------NDSSKRC 101
H+++DC S+ CY C +GH AR CP N SK C
Sbjct: 58 HISRDCPDAANAPPGAIGGASTTECYRCGKTGHIARTCPDAASGGGYGGGGGGNFGSKTC 117
Query: 102 YACHQAGHMAKECP-----------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
Y C GH++++C G + P+P CY CG +GH+S DC V
Sbjct: 118 YTCGGVGHLSRDCVQGSKCYNCSGVGHISRDCPQP---QRRACYTCGSEGHISRDCPGV 173
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 36 GIVCYKCNNYGHFARECATESV-TCYNCSGQGHVAKDCTVKSSI-ICYNCNSSGHFARNC 93
G C+ C +GH A C TCYNC +GHV+K+CT ++ CY C GH +R+C
Sbjct: 4 GRGCFNCGGFGHQAANCPKAGTPTCYNCGLEGHVSKECTSETKAKACYRCGQEGHISRDC 63
Query: 94 PN-----------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDM---SLTCYVCGHQ 139
P+ S+ CY C + GH+A+ CP +G S TCY CG
Sbjct: 64 PDAANAPPGAIGGASTTECYRCGKTGHIARTCPDAASGGGYGGGGGGNFGSKTCYTCGGV 123
Query: 140 GHLSYDC 146
GHLS DC
Sbjct: 124 GHLSRDC 130
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGI-----VCYKCNNYGHFARECATE 55
+ ST +CY C GH +CP +S G G CY C GH +R+C +
Sbjct: 74 IGGASTTECYRCGKTGHIARTCPDAASGGGYGGGGGGNFGSKTCYTCGGVGHLSRDC-VQ 132
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK 99
CYNCSG GH+++DC CY C S GH +R+CP +++
Sbjct: 133 GSKCYNCSGVGHISRDCPQPQRRACYTCGSEGHISRDCPGVATE 176
>gi|255082406|ref|XP_002504189.1| predicted protein [Micromonas sp. RCC299]
gi|226519457|gb|ACO65447.1| predicted protein [Micromonas sp. RCC299]
Length = 938
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 55/115 (47%), Gaps = 24/115 (20%)
Query: 39 CYKCNNYGHFARECAT---ESVTCYNCSGQGHVAKDCTVKSSI----ICYNCNSSGHFAR 91
C+KC GH AREC E TC+ C GH+A+DC S C+ C SGH AR
Sbjct: 646 CHKCGMPGHIARECPNAPGEQRTCHVCGEGGHIARDCPQGPSRPEERACHVCGESGHLAR 705
Query: 92 NCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+CP + C+ C + GH A ECP C CG +GH++ DC
Sbjct: 706 DCPQST---CHNCGKPGHRAAECP--------------EARCRRCGEKGHMARDC 743
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 39/92 (42%), Gaps = 10/92 (10%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+ C + GH CPQ S C+ C GH AR+C TC+NC GH
Sbjct: 669 CHVCGEGGHIARDCPQGPSRPEER-----ACHVCGESGHLARDCPQS--TCHNCGKPGHR 721
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSSKR 100
A +C C C GH AR+C N R
Sbjct: 722 AAECPEAR---CRRCGEKGHMARDCVNPPMSR 750
>gi|50475|emb|CAA77897.1| cellular nucleic acid binding protein clone 14 [Mus musculus]
Length = 171
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 22/166 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR-----------GDKVGIVCYKCNNYGHFAREC- 52
S+ +C+ C GH+ CP + +CY+C GH A++C
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCD 61
Query: 53 ATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
E CYNC GH+AKDC + CYNC H AR+C + ++CY+C + GH
Sbjct: 62 LQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPDHLARDCDHADEQKCYSCGEFGH 121
Query: 110 MAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 IQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 167
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 58/136 (42%), Gaps = 35/136 (25%)
Query: 39 CYKCNNYGHFARECATESV---------------------TCYNCSGQGHVAKDCTVKSS 77
C+KC GH+AREC T CY C GH+AKDC ++
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 78 IICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
CYNC GH A++C +R CY C + H+A++C K CY
Sbjct: 66 EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPDHLARDCDHADEQK-----------CY 114
Query: 135 VCGHQGHLSYDCKLVQ 150
CG GH+ DC V+
Sbjct: 115 SCGEFGHIQKDCTKVK 130
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 112 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 159
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 160 HLARECTIEAT 170
>gi|254569552|ref|XP_002491886.1| Protein with seven cysteine-rich CCHC zinc-finger motifs, similar
to human CNBP [Komagataella pastoris GS115]
gi|238031683|emb|CAY69606.1| Protein with seven cysteine-rich CCHC zinc-finger motifs, similar
to human CNBP [Komagataella pastoris GS115]
gi|328351614|emb|CCA38013.1| Zinc finger protein GIS2 [Komagataella pastoris CBS 7435]
Length = 171
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNC- 93
C+KC GH A C E CYNC GH + DC SS CYNCN +GH C
Sbjct: 9 TCFKCGEVGHLAENCQQEQKLCYNCRAPGHESNDCPEPKQTSSKQCYNCNETGHVQSECE 68
Query: 94 -PNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
P ++K CY+C + GH ++ CP ++ S PV S CY C H + DC+
Sbjct: 69 QPKKAAK-CYSCGKLGHFSRHCPNSSSASSAGPVASSSTICYKCSGPNHFARDCQ 122
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 71/143 (49%), Gaps = 27/143 (18%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCS 63
TS+ QCYNC + GH Q C Q K CY C GHF+R C S S
Sbjct: 49 TSSKQCYNCNETGHVQSECEQ--------PKKAAKCYSCGKLGHFSRHCPNSSSA----S 96
Query: 64 GQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
G VA SS ICY C+ HFAR+C S +CYAC + GH++K+C +G S
Sbjct: 97 SAGPVAS-----SSTICYKCSGPNHFARDC-QAGSPKCYACGKLGHISKDC--TVSGGS- 147
Query: 124 EPVVDMSLTCYVCGHQGHLSYDC 146
+ CY CG QGH+S DC
Sbjct: 148 ------TKACYNCGEQGHISRDC 164
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVG--IVCYKCNNYGHFARECATESVTCYNCSGQ 65
+CY+C GH+ CP SSA + G +CYKC+ HFAR+C S CY C
Sbjct: 75 KCYSCGKLGHFSRHCPNSSSASSAGPVASSSTICYKCSGPNHFARDCQAGSPKCYACGKL 134
Query: 66 GHVAKDCTVK--SSIICYNCNSSGHFARNCP 94
GH++KDCTV S+ CYNC GH +R+CP
Sbjct: 135 GHISKDCTVSGGSTKACYNCGEQGHISRDCP 165
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
Query: 79 ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGH 138
C+ C GH A NC + K CY C GH + +CP EP S CY C
Sbjct: 9 TCFKCGEVGHLAENCQQEQ-KLCYNCRAPGHESNDCP--------EPKQTSSKQCYNCNE 59
Query: 139 QGHLSYDCKLVQKS 152
GH+ +C+ +K+
Sbjct: 60 TGHVQSECEQPKKA 73
>gi|395863010|ref|XP_003803706.1| PREDICTED: cellular nucleic acid-binding protein-like [Otolemur
garnettii]
Length = 170
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSS-----------ADARGDKVGIVCYKCNNYGHFARECA 53
S +C+ C GH+ CP+ + + +CY+C GH A+ C
Sbjct: 2 SNKECFKCGRSGHWARGCPRGGARGRGARGRGRGSPCSSTTFSDICYRCGESGHHAKNCD 61
Query: 54 TESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
CYNC GH+AKDC + CY+C GH AR+C + ++CY+C + GH+
Sbjct: 62 LLEDICYNCGRSGHIAKDCNEPKREREQCCYSCGRPGHLARDCDHQEEQKCYSCGEFGHI 121
Query: 111 AKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 QKDCTQVKCYRCGETGHVAINCSKATEVNCYRCGESGHLARECPI 166
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 61/136 (44%), Gaps = 36/136 (26%)
Query: 39 CYKCNNYGHFAREC---------------------ATESVTCYNCSGQGHVAKDCTVKSS 77
C+KC GH+AR C T S CY C GH AK+C +
Sbjct: 6 CFKCGRSGHWARGCPRGGARGRGARGRGRGSPCSSTTFSDICYRCGESGHHAKNCDLLED 65
Query: 78 IICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
I CYNC SGH A++C +R CY+C + GH+A++C Q K CY
Sbjct: 66 I-CYNCGRSGHIAKDCNEPKREREQCCYSCGRPGHLARDCDHQEEQK-----------CY 113
Query: 135 VCGHQGHLSYDCKLVQ 150
CG GH+ DC V+
Sbjct: 114 SCGEFGHIQKDCTQVK 129
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CY+C GH C + CY C +GH ++C V CY C GHV
Sbjct: 91 CYSCGRPGHLARDCDHQEEQK---------CYSCGEFGHIQKDCT--QVKCYRCGETGHV 139
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
A +C+ + + CY C SGH AR CP +++
Sbjct: 140 AINCSKATEVNCYRCGESGHLARECPIEAT 169
>gi|338729303|ref|XP_001505024.3| PREDICTED: cellular nucleic acid-binding protein-like [Equus
caballus]
Length = 170
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 73/163 (44%), Gaps = 21/163 (12%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSS-----------ADARGDKVGIVCYKCNNYGHFARECA 53
S+ C+ GH+ CP+ + + + +CY+C GH AR+C
Sbjct: 2 SSKDCFRGGRSGHWARGCPRGGARGRGARGRGRGSQGTSTTLPDICYRCGESGHHARDCH 61
Query: 54 TESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
CYNC GH+AKDCT + CY C GH AR+C ++CY+C + GH
Sbjct: 62 LLENICYNCGRSGHIAKDCTEPKREREQCCYTCGRRGHLARDCDRQEQQKCYSCGELGHF 121
Query: 111 AKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
K+C G+T + + CY CG GHL+ +C
Sbjct: 122 QKDCTQVKCYRCGETGHVAINCSKKNKVNCYRCGKPGHLAREC 164
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGH 67
CYNC GH C + + CY C GH AR+C E CY+C GH
Sbjct: 67 CYNCGRSGHIAKDCTEPKREREQ------CCYTCGRRGHLARDCDRQEQQKCYSCGELGH 120
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
KDCT + CY C +GH A NC + CY C + GH+A+ECP
Sbjct: 121 FQKDCT---QVKCYRCGETGHVAINCSKKNKVNCYRCGKPGHLARECP 165
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 58/136 (42%), Gaps = 36/136 (26%)
Query: 39 CYKCNNYGHFAREC---------------------ATESVTCYNCSGQGHVAKDCTVKSS 77
C++ GH+AR C T CY C GH A+DC + +
Sbjct: 6 CFRGGRSGHWARGCPRGGARGRGARGRGRGSQGTSTTLPDICYRCGESGHHARDCHLLEN 65
Query: 78 IICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
I CYNC SGH A++C +R CY C + GH+A++C Q K CY
Sbjct: 66 I-CYNCGRSGHIAKDCTEPKREREQCCYTCGRRGHLARDCDRQEQQK-----------CY 113
Query: 135 VCGHQGHLSYDCKLVQ 150
CG GH DC V+
Sbjct: 114 SCGELGHFQKDCTQVK 129
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CY C GH C ++ CY C GHF ++C V CY C GHV
Sbjct: 91 CYTCGRRGHLARDCDRQEQQK---------CYSCGELGHFQKDCT--QVKCYRCGETGHV 139
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
A +C+ K+ + CY C GH AR CP +++
Sbjct: 140 AINCSKKNKVNCYRCGKPGHLARECPTEAT 169
>gi|442762043|gb|JAA73180.1| Putative e3 ubiquitin ligase, partial [Ixodes ricinus]
Length = 179
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 66/142 (46%), Gaps = 22/142 (15%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDK-------------------VGIVCYKCN 43
S S +CY C GH+ C Q RG + CYKCN
Sbjct: 40 SMSATECYKCHKPGHFARECFQDGGGVGRGGGLGPRGGRGGPRGRMDYKPPIREKCYKCN 99
Query: 44 NYGHFARECATESVTCYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARNCPNDSSKRCY 102
GHFAR+C CY C+G GH++KDC + CYNC GH AR C + K CY
Sbjct: 100 RIGHFARDCKEAEDRCYRCNGTGHISKDCQHGPDEMSCYNCGKMGHIAREC-KEQEKTCY 158
Query: 103 ACHQAGHMAKECPGQTAGKSPE 124
CH+ GH++++C Q + PE
Sbjct: 159 ICHKQGHISRDCE-QDERRPPE 179
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 25/143 (17%)
Query: 24 QKSSADARGDKVG------IVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSS 77
++S+A A G + G CYKC+ GHFAREC + G G +
Sbjct: 25 RESTAGAEGARGGRRSMSATECYKCHKPGHFARECFQDGGGVGRGGGLGPRGGRGGPRGR 84
Query: 78 I--------ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDM 129
+ CY CN GHFAR+C ++ RCY C+ GH++K+C P+
Sbjct: 85 MDYKPPIREKCYKCNRIGHFARDC-KEAEDRCYRCNGTGHISKDCQ-----HGPD----- 133
Query: 130 SLTCYVCGHQGHLSYDCKLVQKS 152
++CY CG GH++ +CK +K+
Sbjct: 134 EMSCYNCGKMGHIARECKEQEKT 156
>gi|171694395|ref|XP_001912122.1| hypothetical protein [Podospora anserina S mat+]
gi|170947146|emb|CAP73951.1| unnamed protein product [Podospora anserina S mat+]
Length = 479
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC GH C + + R + + CY C+ GH R+C T V C NC
Sbjct: 276 KCRNCDQLGHISKHCKEDKRENER---IQVKCYNCDEVGHRVRDCPTPRVDKFACKNCGQ 332
Query: 65 QGHVAKDCTVKSS---IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGK 121
GH +C S + C CN +GHF+++CP+ + C C Q GHM+KEC
Sbjct: 333 PGHPVAECPEPRSAEGVECRKCNETGHFSKDCPSAGPRGCRNCGQEGHMSKEC------- 385
Query: 122 SPEPVVDMSLTCYVCGHQGHLSYDC 146
EP ++ C C GH S +C
Sbjct: 386 -TEPKNMDNVQCRNCDEMGHFSKEC 409
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 61/114 (53%), Gaps = 13/114 (11%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT-CYNCSGQGH 67
C NC GH CP+ SA+ G+ C KCN GHF+++C + C NC +GH
Sbjct: 327 CKNCGQPGHPVAECPEPRSAE------GVECRKCNETGHFSKDCPSAGPRGCRNCGQEGH 380
Query: 68 VAKDCTVK---SSIICYNCNSSGHFARNCPN--DSSK-RCYACHQAGHMAKECP 115
++K+CT ++ C NC+ GHF++ CP D S+ C CHQ GH CP
Sbjct: 381 MSKECTEPKNMDNVQCRNCDEMGHFSKECPKPPDWSRVECQNCHQKGHTKVRCP 434
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 16/100 (16%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT----ESVT 58
S ++C C + GH+ CP SA RG C C GH ++EC ++V
Sbjct: 345 SAEGVECRKCNETGHFSKDCP---SAGPRG------CRNCGQEGHMSKECTEPKNMDNVQ 395
Query: 59 CYNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCPN 95
C NC GH +K+C S + C NC+ GH CPN
Sbjct: 396 CRNCDEMGHFSKECPKPPDWSRVECQNCHQKGHTKVRCPN 435
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 13/88 (14%)
Query: 66 GHVAKDCTVKSSII--CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
GH DC+ + C C GH++++CP C AC H+ KECP AG
Sbjct: 71 GHNKADCSNPRKPLGACRRCGDEGHYSKDCPTAGPMTCNACGSTEHLRKECP--DAG--- 125
Query: 124 EPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
+ C CG +GH C+ +K
Sbjct: 126 ------PMLCKNCGEEGHTISACENARK 147
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 38 VCYKCNNYGHFARECATES-VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
C +C + GH++++C T +TC C H+ K+C ++C NC GH C N
Sbjct: 86 ACRRCGDEGHYSKDCPTAGPMTCNACGSTEHLRKECPDAGPMLCKNCGEEGHTISACEN 144
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 25/56 (44%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
C C +GH +KDC + C C S+ H + CP+ C C + GH C
Sbjct: 87 CRRCGDEGHYSKDCPTAGPMTCNACGSTEHLRKECPDAGPMLCKNCGEEGHTISAC 142
>gi|330912764|ref|XP_003296063.1| hypothetical protein PTT_04676 [Pyrenophora teres f. teres 0-1]
gi|311332086|gb|EFQ95837.1| hypothetical protein PTT_04676 [Pyrenophora teres f. teres 0-1]
Length = 512
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CYNCSGQ 65
C NC + GH + C Q+ + + C C GH AR+C E C NC +
Sbjct: 309 CNNCNELGHVRKHCKQEQ-PERENMQPETQCVYCQEVGHRARDCPKERTNPFACKNCKQE 367
Query: 66 GHVAKDCTVKSS---IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKS 122
GH +K+C S + C CN +GHF+++CPN +++ C C A HMAKEC
Sbjct: 368 GHNSKECPEPRSAEGVECRKCNETGHFSKDCPNVAARTCRNCGSADHMAKEC-------- 419
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDC 146
+P ++TC C GH S DC
Sbjct: 420 DQPRNPDTVTCRNCEKMGHFSKDC 443
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-TCYNC 62
T+ C NC GH CP+ SA+ G+ C KCN GHF+++C + TC NC
Sbjct: 356 TNPFACKNCKQEGHNSKECPEPRSAE------GVECRKCNETGHFSKDCPNVAARTCRNC 409
Query: 63 SGQGHVAKDCTVK---SSIICYNCNSSGHFARNCPN--DSSK-RCYACHQAGHMAKEC 114
H+AK+C ++ C NC GHF+++CP D SK +C C + GH C
Sbjct: 410 GSADHMAKECDQPRNPDTVTCRNCEKMGHFSKDCPEPRDYSKVKCSNCQEMGHTYVRC 467
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 63/147 (42%), Gaps = 22/147 (14%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTCYNCS 63
QC C + GH CP++ + C C GH ++EC + E V C C+
Sbjct: 337 QCVYCQEVGHRARDCPKERTNP-------FACKNCKQEGHNSKECPEPRSAEGVECRKCN 389
Query: 64 GQGHVAKDCTVKSSIICYNCNSSGHFARNCP---NDSSKRCYACHQAGHMAKECPGQTAG 120
GH +KDC ++ C NC S+ H A+ C N + C C + GH +K+C
Sbjct: 390 ETGHFSKDCPNVAARTCRNCGSADHMAKECDQPRNPDTVTCRNCEKMGHFSKDC------ 443
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDCK 147
PEP + C C GH CK
Sbjct: 444 --PEPRDYSKVKCSNCQEMGHTYVRCK 468
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 16/93 (17%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TESVT 58
S ++C C + GH+ CP ++ C C + H A+EC ++VT
Sbjct: 379 SAEGVECRKCNETGHFSKDCPNVAAR---------TCRNCGSADHMAKECDQPRNPDTVT 429
Query: 59 CYNCSGQGHVAKDCTVK---SSIICYNCNSSGH 88
C NC GH +KDC S + C NC GH
Sbjct: 430 CRNCEKMGHFSKDCPEPRDYSKVKCSNCQEMGH 462
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 12/74 (16%)
Query: 80 CYNCNSSGHFARNCPNDS------SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTC 133
C C +GHFAR+CP+ + CY C Q GH +CP + + TC
Sbjct: 107 CRICKQTGHFARDCPDKPEGGGGLTGECYNCGQVGHNKADCPNERVERP------FEGTC 160
Query: 134 YVCGHQGHLSYDCK 147
+C +GH + +CK
Sbjct: 161 KLCDQEGHRAVNCK 174
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 23/94 (24%)
Query: 79 ICYNCNSSGHFARNCPNDSSKR--------CYACHQAGHMAKECP--------------- 115
+C NCN GH ++C + +R C C + GH A++CP
Sbjct: 308 LCNNCNELGHVRKHCKQEQPERENMQPETQCVYCQEVGHRARDCPKERTNPFACKNCKQE 367
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
G + + PEP + C C GH S DC V
Sbjct: 368 GHNSKECPEPRSAEGVECRKCNETGHFSKDCPNV 401
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 33/81 (40%), Gaps = 19/81 (23%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C C GHFAR+C + +G+ CYNC GH +CPN+
Sbjct: 107 CRICKQTGHFARDCPDKPEGGGGLTGE--------------CYNCGQVGHNKADCPNERV 152
Query: 99 KR-----CYACHQAGHMAKEC 114
+R C C Q GH A C
Sbjct: 153 ERPFEGTCKLCDQEGHRAVNC 173
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 9/83 (10%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---- 57
+ S C C GH+ CP K G + CY C GH +C E V
Sbjct: 100 NDASDDSCRICKQTGHFARDCPDKPEG---GGGLTGECYNCGQVGHNKADCPNERVERPF 156
Query: 58 --TCYNCSGQGHVAKDCTVKSSI 78
TC C +GH A +C + ++
Sbjct: 157 EGTCKLCDQEGHRAVNCKSRRNV 179
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 95 NDSSK-RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
ND+S C C Q GH A++CP + PE ++ CY CG GH DC
Sbjct: 100 NDASDDSCRICKQTGHFARDCPDK-----PEGGGGLTGECYNCGQVGHNKADC 147
>gi|426257255|ref|XP_004022245.1| PREDICTED: cellular nucleic acid-binding protein-like [Ovis aries]
Length = 170
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 21/166 (12%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADAR-----------GDKVGIVCYKCNNYGHFAREC 52
S+ +C+ C GH+ C + + + ++CY+C GH A++C
Sbjct: 1 MSSKECFKCGRIGHWARGCSRGGARGRGARGRGRGAQCSSTTLPVICYRCGESGHHAKDC 60
Query: 53 ATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
CYNC GH+AKDC + CY C GH AR+C + ++CY+C + GH
Sbjct: 61 DLLDDICYNCGKSGHIAKDCAEPKREGERCCYTCGRPGHLARDCDHQEEQKCYSCGKRGH 120
Query: 110 MAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+ K+C G+ + + CY CG GHL+ +C +
Sbjct: 121 IQKDCTQVKCYRCGEIGHVAINCRKMSEVNCYRCGESGHLARECPI 166
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 63/136 (46%), Gaps = 36/136 (26%)
Query: 39 CYKCNNYGHFARECA---------------------TESVTCYNCSGQGHVAKDCTVKSS 77
C+KC GH+AR C+ T V CY C GH AKDC +
Sbjct: 6 CFKCGRIGHWARGCSRGGARGRGARGRGRGAQCSSTTLPVICYRCGESGHHAKDCDLLDD 65
Query: 78 IICYNCNSSGHFARNC--PNDSSKRC-YACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
I CYNC SGH A++C P +RC Y C + GH+A++C Q K CY
Sbjct: 66 I-CYNCGKSGHIAKDCAEPKREGERCCYTCGRPGHLARDCDHQEEQK-----------CY 113
Query: 135 VCGHQGHLSYDCKLVQ 150
CG +GH+ DC V+
Sbjct: 114 SCGKRGHIQKDCTQVK 129
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 48/109 (44%), Gaps = 25/109 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQGH 67
CYNC GH C + R CY C GH AR+C E CY+C +GH
Sbjct: 67 CYNCGKSGHIAKDCAEPKREGER------CCYTCGRPGHLARDCDHQEEQKCYSCGKRGH 120
Query: 68 VAKDCT-VK-----------------SSIICYNCNSSGHFARNCPNDSS 98
+ KDCT VK S + CY C SGH AR CP +++
Sbjct: 121 IQKDCTQVKCYRCGEIGHVAINCRKMSEVNCYRCGESGHLARECPIEAT 169
>gi|37220736|gb|AAQ89709.1| putative zinc finger protein [Hyacinthus orientalis]
Length = 244
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 69/149 (46%), Gaps = 21/149 (14%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT----- 58
T+ C+NC + GH C ++ VC+ CN GH AR+C+ ++
Sbjct: 78 TAKTLCWNCKEPGHMANECSNEA-----------VCHNCNKTGHLARDCSASGLSSFDTR 126
Query: 59 -CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
C NC GH+A DCT + C NC GH AR C ND C C+ +GH+A++CP
Sbjct: 127 LCNNCHRPGHIAADCT--NDKTCNNCRKPGHLARECTNDPV--CNVCNVSGHVARQCPKS 182
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ C VC GH+S DC
Sbjct: 183 NLPSEIHGGPFRDIICRVCNQPGHISRDC 211
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 11/123 (8%)
Query: 24 QKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNC 83
++ + RG + ++C C GHFAR+C+ +V C NC GH+A +CT K+ +C+NC
Sbjct: 30 RRDPREHRGFRQDVICKNCKRPGHFARDCSHIAV-CNNCGLPGHIAAECTAKT--LCWNC 86
Query: 84 NSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLS 143
GH A C N++ C+ C++ GH+A++C +G S D L C C GH++
Sbjct: 87 KEPGHMANECSNEAV--CHNCNKTGHLARDC--SASGLS---SFDTRL-CNNCHRPGHIA 138
Query: 144 YDC 146
DC
Sbjct: 139 ADC 141
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 54/126 (42%), Gaps = 25/126 (19%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
+SS T C NC GH +AD DK C C GH AREC + V C
Sbjct: 120 LSSFDTRLCNNCHRPGHI--------AADCTNDKT---CNNCRKPGHLARECTNDPV-CN 167
Query: 61 NCSGQGHVAKDCTVKS-----------SIICYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
C+ GHVA+ C + IIC CN GH +R+C C C GH
Sbjct: 168 VCNVSGHVARQCPKSNLPSEIHGGPFRDIICRVCNQPGHISRDCVGIVI--CNTCGGRGH 225
Query: 110 MAKECP 115
MA ECP
Sbjct: 226 MAYECP 231
>gi|58004785|gb|AAW62455.1| cellular nucleic acid binding protein mutant H128Q [synthetic
construct]
Length = 178
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 74/173 (42%), Gaps = 29/173 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR-------------------GDKVGIVCYKCNNY 45
S+ +C+ C GH+ CP + +CY+C
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 46 GHFARECATESVTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCY 102
GH A++C + CYNC GH+AKDC + CYNC GH AR+C + ++CY
Sbjct: 62 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDCEHADEQKCY 121
Query: 103 ACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+C + G + K+C G T + + CY CG GHL+ +C +
Sbjct: 122 SCGEFGQIQKDCTKVKCYRCGDTGHVAINCSKTSEVNCYRCGESGHLARECTI 174
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FG Q C + + CY+C + GH A C+ T V CY C G
Sbjct: 119 KCYSCGEFGQIQKDCTK------------VKCYRCGDTGHVAINCSKTSEVNCYRCGESG 166
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 167 HLARECTIEAT 177
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 40/105 (38%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR----------------------------CYACHQA 107
SS C+ C +GH+AR CP + CY C ++
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
GH+AK+C Q CY CG GH++ DCK +K
Sbjct: 62 GHLAKDCDLQED------------ACYNCGRGGHIAKDCKEPRKE 94
>gi|7263178|gb|AAF44118.1| cellular nucleic acid binding protein mutant H107Q [synthetic
construct]
Length = 178
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 74/173 (42%), Gaps = 29/173 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR-------------------GDKVGIVCYKCNNY 45
S+ +C+ C GH+ CP + +CY+C
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 46 GHFARECATESVTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCY 102
GH A++C + CYNC GH+AKDC + CYNC G AR+C + ++CY
Sbjct: 62 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGQLARDCEHADEQKCY 121
Query: 103 ACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+C + GH+ K+C G T + + CY CG GHL+ +C +
Sbjct: 122 SCGEFGHIQKDCTKVKCYRCGDTGHVAINCSKTSEVNCYRCGESGHLARECTI 174
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C + GH A C+ T V CY C G
Sbjct: 119 KCYSCGEFGHIQKDCTK------------VKCYRCGDTGHVAINCSKTSEVNCYRCGESG 166
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 167 HLARECTIEAT 177
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 40/105 (38%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR----------------------------CYACHQA 107
SS C+ C +GH+AR CP + CY C ++
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
GH+AK+C Q CY CG GH++ DCK +K
Sbjct: 62 GHLAKDCDLQED------------ACYNCGRGGHIAKDCKEPRKE 94
>gi|378732167|gb|EHY58626.1| cellular nucleic acid-binding protein [Exophiala dermatitidis
NIH/UT8656]
Length = 464
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 62/142 (43%), Gaps = 18/142 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE----SVTCYNCSG 64
C NC GH CP++ +++ + CY C GH R+C E C C
Sbjct: 247 CRNCEKVGHKTKDCPEEKMVR---EQLIVTCYLCGEQGHRVRDCTQERKKPGRACRICEA 303
Query: 65 QGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPE 124
+ H+AKDC + C NC + H AR CP+ + C C + H+A+ECP
Sbjct: 304 EDHIAKDCPNREKQTCRNCGAEDHMARECPDREKRTCRKCGEEDHIARECPNAP------ 357
Query: 125 PVVDMSLTCYVCGHQGHLSYDC 146
TC +C + H + DC
Sbjct: 358 -----KQTCNICDAEDHFAKDC 374
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 62/146 (42%), Gaps = 9/146 (6%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-ESVTCYNCSGQ 65
+ CY C + GH C Q+ K G C C H A++C E TC NC +
Sbjct: 272 VTCYLCGEQGHRVRDCTQERK------KPGRACRICEAEDHIAKDCPNREKQTCRNCGAE 325
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEP 125
H+A++C + C C H AR CPN + C C H AK+CP + P
Sbjct: 326 DHMARECPDREKRTCRKCGEEDHIARECPNAPKQTCNICDAEDHFAKDCP-KKGEPGLRP 384
Query: 126 VVDMS-LTCYVCGHQGHLSYDCKLVQ 150
D S + C +C +GH C +
Sbjct: 385 RRDWSQVVCSLCEQKGHGRARCPQAE 410
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 55/124 (44%), Gaps = 21/124 (16%)
Query: 33 DKVGIVCYKCNNYGHFARECATES-------VTCYNCSGQGHVAKDCT---VKSSIICYN 82
D+ +C C GH ++C E VTCY C QGH +DCT K C
Sbjct: 241 DRGVDLCRNCEKVGHKTKDCPEEKMVREQLIVTCYLCGEQGHRVRDCTQERKKPGRACRI 300
Query: 83 CNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHL 142
C + H A++CPN + C C HMA+ECP + TC CG + H+
Sbjct: 301 CEAEDHIAKDCPNREKQTCRNCGAEDHMARECPDRE-----------KRTCRKCGEEDHI 349
Query: 143 SYDC 146
+ +C
Sbjct: 350 AREC 353
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 38 VCYKCNNYGHFARECATESV--TCYNCSGQGHVAKDCTVKSSII--CYNCNSSGHFARNC 93
C C GHFAREC C+NC +GH +CT C NC GH +C
Sbjct: 33 ACRNCGQEGHFARECPEPRKMGACFNCGEEGHSKAECTAPRKFKGECRNCGEEGHMISDC 92
Query: 94 PNDSSKRCYACHQAGHMAKEC 114
P K C C Q GH A +C
Sbjct: 93 PTYVEK-CKNCQQEGHNAIDC 112
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 37/92 (40%), Gaps = 15/92 (16%)
Query: 59 CYNCSGQGHVAKDCTVKSSI-ICYNCNSSGHFARNC--PNDSSKRCYACHQAGHMAKECP 115
C NC +GH A++C + C+NC GH C P C C + GHM +CP
Sbjct: 34 CRNCGQEGHFARECPEPRKMGACFNCGEEGHSKAECTAPRKFKGECRNCGEEGHMISDCP 93
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
C C +GH + DCK
Sbjct: 94 TYVE------------KCKNCQQEGHNAIDCK 113
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 37/90 (41%), Gaps = 12/90 (13%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSGQ 65
C NC GH+ CP+ K+G C+ C GH EC C NC +
Sbjct: 34 CRNCGQEGHFARECPEPR-------KMG-ACFNCGEEGHSKAECTAPRKFKGECRNCGEE 85
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
GH+ DC C NC GH A +C N
Sbjct: 86 GHMISDCPTYVEK-CKNCQQEGHNAIDCKN 114
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 101 CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
C C + GH K+CP + + + +TCY+CG QGH DC +K
Sbjct: 247 CRNCEKVGHKTKDCPEEKMVRE-----QLIVTCYLCGEQGHRVRDCTQERK 292
>gi|319921907|gb|ADV78572.1| universal minicircle sequence-binding protein 2 [Leishmania
donovani]
Length = 175
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 67/121 (55%), Gaps = 16/121 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE--SVTCYNC 62
S I CY C + GH SCP+ ++ + CY C GH +R+C +E +CYNC
Sbjct: 62 SAITCYKCGEAGHMSRSCPRAAATRS--------CYNCGETGHMSRDCPSERKPKSCYNC 113
Query: 63 SGQGHVAKDCTVKS-----SIICYNCNSSGHFARNCPND-SSKRCYACHQAGHMAKECPG 116
H++++CT ++ + CYNC +GH +R+CPN+ K CY C H+++ECP
Sbjct: 114 GSTDHLSRECTNEAKAGADTRSCYNCGGTGHLSRDCPNERKPKSCYNCGSTDHLSRECPD 173
Query: 117 Q 117
+
Sbjct: 174 R 174
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 63/119 (52%), Gaps = 18/119 (15%)
Query: 36 GIVCYKCNNYGHFARECATESVT--CYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARN 92
I CYKC GH +R C + T CYNC GH+++DC + + CYNC S+ H +R
Sbjct: 63 AITCYKCGEAGHMSRSCPRAAATRSCYNCGETGHMSRDCPSERKPKSCYNCGSTDHLSRE 122
Query: 93 CPNDS-----SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C N++ ++ CY C GH++++CP + KS CY CG HLS +C
Sbjct: 123 CTNEAKAGADTRSCYNCGGTGHLSRDCPNERKPKS----------CYNCGSTDHLSREC 171
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 11/74 (14%)
Query: 74 VKSSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAGKSPEPVVDMSLT 132
+ S+I CY C +GH +R+CP ++ R CY C + GHM+++CP + KS
Sbjct: 60 IMSAITCYKCGEAGHMSRSCPRAAATRSCYNCGETGHMSRDCPSERKPKS---------- 109
Query: 133 CYVCGHQGHLSYDC 146
CY CG HLS +C
Sbjct: 110 CYNCGSTDHLSREC 123
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 10/51 (19%)
Query: 101 CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
CY C +AGHM++ CP A +S CY CG GH+S DC +K
Sbjct: 66 CYKCGEAGHMSRSCPRAAATRS----------CYNCGETGHMSRDCPSERK 106
>gi|98986202|dbj|BAE94497.1| Vasa [Polyandrocarpa misakiensis]
Length = 705
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 15/121 (12%)
Query: 39 CYKCNNYGHFARECA------TESVTCYNCSGQGHVAKDC----TVKSSIICYNCNSSGH 88
C+KC GH +R+C T++ C+ C +GH+++DC + SS C+ C GH
Sbjct: 71 CFKCGQEGHMSRDCTSGASGDTQAKKCFKCGEEGHMSRDCPSNTSTGSSKACFKCGEEGH 130
Query: 89 FARNCP---NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYD 145
+R CP N++SK C+ C + GHM++ECP + K + S C+ CG +GH+S +
Sbjct: 131 MSRECPNNNNNNSKACFKCGEEGHMSRECPNNNSSK--DGFGTSSRACFKCGEEGHMSRE 188
Query: 146 C 146
C
Sbjct: 189 C 189
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 69/134 (51%), Gaps = 24/134 (17%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT-----CYNCS 63
C+ C GH C +S D + K C+KC GH +R+C + + T C+ C
Sbjct: 71 CFKCGQEGHMSRDCTSGASGDTQAKK----CFKCGEEGHMSRDCPSNTSTGSSKACFKCG 126
Query: 64 GQGHVAKDC---TVKSSIICYNCNSSGHFARNCPND---------SSKRCYACHQAGHMA 111
+GH++++C +S C+ C GH +R CPN+ SS+ C+ C + GHM+
Sbjct: 127 EEGHMSRECPNNNNNNSKACFKCGEEGHMSRECPNNNSSKDGFGTSSRACFKCGEEGHMS 186
Query: 112 KECPGQTAGKSPEP 125
+ECP AG+ P+P
Sbjct: 187 RECP--KAGE-PDP 197
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 17/98 (17%)
Query: 58 TCYNCSGQGHVAKDCTVKSS-----IICYNCNSSGHFARNCPND----SSKRCYACHQAG 108
+C+ C +GH+++DCT +S C+ C GH +R+CP++ SSK C+ C + G
Sbjct: 70 SCFKCGQEGHMSRDCTSGASGDTQAKKCFKCGEEGHMSRDCPSNTSTGSSKACFKCGEEG 129
Query: 109 HMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
HM++ECP S C+ CG +GH+S +C
Sbjct: 130 HMSRECPNNNNNNSK--------ACFKCGEEGHMSREC 159
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 17/93 (18%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYN 61
S+ S+ C+ C + GH CP ++ +++ C+KC GH +REC
Sbjct: 115 STGSSKACFKCGEEGHMSRECPNNNNNNSK------ACFKCGEEGHMSRECPN------- 161
Query: 62 CSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
+ +KD SS C+ C GH +R CP
Sbjct: 162 ----NNSSKDGFGTSSRACFKCGEEGHMSRECP 190
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++ C+ C Q GHM+++C +G + + C+ CG +GH+S DC
Sbjct: 68 NRSCFKCGQEGHMSRDCTSGASGDT------QAKKCFKCGEEGHMSRDC 110
>gi|357114909|ref|XP_003559236.1| PREDICTED: DNA-binding protein HEXBP-like [Brachypodium distachyon]
Length = 301
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 69/145 (47%), Gaps = 17/145 (11%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE--SVTCYN 61
TS C+NC GH C ++ +C+ C+ GH AR+C T + C N
Sbjct: 140 TSKTVCWNCKKSGHIATECTNEA-----------LCHTCSKSGHLARDCPTSGSAKLCNN 188
Query: 62 CSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGK 121
C GH+A DCT + C NC SGH AR C ND C C+ +GH+A+ CP T
Sbjct: 189 CFQPGHIAVDCTNDRA--CNNCRQSGHIARECTNDPV--CNLCNVSGHLARACPKTTLAS 244
Query: 122 SPEPVVDMSLTCYVCGHQGHLSYDC 146
+ C +CG GH+S +C
Sbjct: 245 EIHGGPFRDILCRMCGQPGHISRNC 269
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 71/141 (50%), Gaps = 28/141 (19%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
+ C NC GH+ CP S+ C CN GHFA EC +++V C+NC G
Sbjct: 105 LSCKNCRRSGHFARDCPSAST-----------CNNCNLPGHFAAECTSKTV-CWNCKKSG 152
Query: 67 HVAKDCTVKSSIICYNCNSSGHFARNCPND-SSKRCYACHQAGHMAKECPGQTAGKSPEP 125
H+A +CT ++ +C+ C+ SGH AR+CP S+K C C Q GH+A +C A
Sbjct: 153 HIATECTNEA--LCHTCSKSGHLARDCPTSGSAKLCNNCFQPGHIAVDCTNDRA------ 204
Query: 126 VVDMSLTCYVCGHQGHLSYDC 146
C C GH++ +C
Sbjct: 205 -------CNNCRQSGHIAREC 218
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 54/125 (43%), Gaps = 25/125 (20%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYN 61
+S S C NCF GH C + C C GH AREC + V C
Sbjct: 179 TSGSAKLCNNCFQPGHIAVDCTNDRA-----------CNNCRQSGHIARECTNDPV-CNL 226
Query: 62 CSGQGHVAKDC---TVKSSI--------ICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
C+ GH+A+ C T+ S I +C C GH +RNC ++ C C GHM
Sbjct: 227 CNVSGHLARACPKTTLASEIHGGPFRDILCRMCGQPGHISRNCM--ATVICDTCGGRGHM 284
Query: 111 AKECP 115
+ ECP
Sbjct: 285 SYECP 289
>gi|198428174|ref|XP_002131234.1| PREDICTED: similar to universal minicircle sequence binding protein
(UMSBP), putative isoform 2 [Ciona intestinalis]
Length = 310
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 75/171 (43%), Gaps = 49/171 (28%)
Query: 9 CYNCFDFGHYQYSCPQ------KSSADAR--GDKVGIVCYKCNNYGHFAREC-------- 52
CY C GH+ CP + + D R G + C++C GH AR+C
Sbjct: 112 CYKCGTPGHFARECPNDAADGIQRNEDRRPMGRRNNDYCFRCGQPGHMARDCLSAENGRS 171
Query: 53 ---ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS------------ 97
AT TCYNC +GH+A+DC ++ CY C +GH AR CP D+
Sbjct: 172 RTGATNINTCYNCYKEGHLARDCPEDNA--CYKCGKAGHLARKCPEDADRNGDARLNRRE 229
Query: 98 --SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+K+CY C GH+ CP TCY C +GH++ DC
Sbjct: 230 AGTKQCYLCQNVGHIQANCP--------------EATCYRCHGEGHIARDC 266
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 35/141 (24%)
Query: 38 VCYKCNNYGHFARECATESVT------------------CYNCSGQGHVAKDC------- 72
VCYKC GHFAREC ++ C+ C GH+A+DC
Sbjct: 111 VCYKCGTPGHFARECPNDAADGIQRNEDRRPMGRRNNDYCFRCGQPGHMARDCLSAENGR 170
Query: 73 --TVKSSI-ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDM 129
T ++I CYNC GH AR+CP D++ CY C +AGH+A++CP + A ++ + ++
Sbjct: 171 SRTGATNINTCYNCYKEGHLARDCPEDNA--CYKCGKAGHLARKCP-EDADRNGDARLNR 227
Query: 130 ----SLTCYVCGHQGHLSYDC 146
+ CY+C + GH+ +C
Sbjct: 228 REAGTKQCYLCQNVGHIQANC 248
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 60/134 (44%), Gaps = 30/134 (22%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE------- 55
+T+ CYNC+ GH CP+ + CYKC GH AR+C +
Sbjct: 175 ATNINTCYNCYKEGHLARDCPEDN-----------ACYKCGKAGHLARKCPEDADRNGDA 223
Query: 56 --------SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQA 107
+ CY C GH+ +C CY C+ GH AR+CPN ++ CY C +
Sbjct: 224 RLNRREAGTKQCYLCQNVGHIQANCP---EATCYRCHGEGHIARDCPN-GNEECYNCRRP 279
Query: 108 GHMAKECPGQTAGK 121
GH A++C G+
Sbjct: 280 GHKARDCDEPRPGE 293
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 41/120 (34%), Gaps = 49/120 (40%)
Query: 76 SSIICYNCNSSGHFARNCPN-DSSKR---------------------------------- 100
S+ C+ C+ SGH+AR CP D +R
Sbjct: 44 SNDNCFICDKSGHWARECPESDEQQREYAPRTRGGFRGRGRGRGRGRGSYGGYGGYGGYG 103
Query: 101 --------CYACHQAGHMAKECPGQTAG--KSPEPVVDMSLT----CYVCGHQGHLSYDC 146
CY C GH A+ECP A + E M C+ CG GH++ DC
Sbjct: 104 TRQRDADVCYKCGTPGHFARECPNDAADGIQRNEDRRPMGRRNNDYCFRCGQPGHMARDC 163
>gi|317033248|ref|XP_001395135.2| zinc knuckle nucleic acid binding protein [Aspergillus niger CBS
513.88]
Length = 228
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 74/174 (42%), Gaps = 41/174 (23%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---- 58
S+S CYNC GH SCP+ + + + CY C GH +C T +
Sbjct: 22 SSSERLCYNCKQPGHESSSCPRPRTTETK------QCYNCQGLGHVQADCPTLRLNGANG 75
Query: 59 -CYNCSGQGHVAKDCTVKSS-------------------------IICYNCNSSGHFARN 92
CYNCS GH+A++C +S CY C HFAR+
Sbjct: 76 RCYNCSQPGHLARNCPAPASGAPRAPAPRGGFNSGFRGGYGYPRAATCYKCGGPNHFARD 135
Query: 93 CPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C + +CYAC + GH+++EC G P+ CY C GH+S DC
Sbjct: 136 C-QAQAMKCYACGKLGHISRECTAPNGG----PLSSAGKVCYKCSQAGHISRDC 184
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 62/131 (47%), Gaps = 21/131 (16%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + CYNC GH +CP
Sbjct: 7 ACYKCGNIGHYAEVCSSSERLCYNCKQPGHESSSCPRPRTTETKQCYNCQGLGHVQADCP 66
Query: 95 ----NDSSKRCYACHQAGHMAKECPGQTAG--KSPEPV------------VDMSLTCYVC 136
N ++ RCY C Q GH+A+ CP +G ++P P + TCY C
Sbjct: 67 TLRLNGANGRCYNCSQPGHLARNCPAPASGAPRAPAPRGGFNSGFRGGYGYPRAATCYKC 126
Query: 137 GHQGHLSYDCK 147
G H + DC+
Sbjct: 127 GGPNHFARDCQ 137
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 64/150 (42%), Gaps = 39/150 (26%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-------- 54
+T T QCYNC GH Q CP A G CY C+ GH AR C
Sbjct: 46 TTETKQCYNCQGLGHVQADCPTLRLNGANGR-----CYNCSQPGHLARNCPAPASGAPRA 100
Query: 55 ------------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC--P 94
+ TCY C G H A+DC ++ + CY C GH +R C P
Sbjct: 101 PAPRGGFNSGFRGGYGYPRAATCYKCGGPNHFARDCQAQA-MKCYACGKLGHISRECTAP 159
Query: 95 N-----DSSKRCYACHQAGHMAKECPGQTA 119
N + K CY C QAGH++++CP A
Sbjct: 160 NGGPLSSAGKVCYKCSQAGHISRDCPSNEA 189
>gi|148535009|gb|ABQ85432.1| CCHC-type zinc finger [Cricetulus griseus]
Length = 164
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 11/122 (9%)
Query: 38 VCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNC 93
+CY+C GH A++C E CYNC GH+AKDC + CYNC GH AR+C
Sbjct: 39 ICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 98
Query: 94 PNDSSKRCYACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ ++CY+C + GH+ K+C G+T + + CY CG GHL+ +C
Sbjct: 99 DHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 158
Query: 147 KL 148
+
Sbjct: 159 TI 160
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQGH 67
CYNC GH C + + CY C GH AR+C + CY+C GH
Sbjct: 61 CYNCGRGGHIAKDCKEPKREREQ------CCYNCGKPGHLARDCDHADEQKCYSCGEFGH 114
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
+ KDCT + CY C +GH A NC S CY C ++GH+A+EC
Sbjct: 115 IQKDCT---KVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 158
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECP 115
CY C GH+AKDC ++ CYNC GH A++C +R CY C + GH+A++C
Sbjct: 40 CYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 99
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
K CY CG GH+ DC V+
Sbjct: 100 HADEQK-----------CYSCGEFGHIQKDCTKVK 123
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 74 VKSSI--ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSL 131
V SS+ ICY C SGH A++C + CY C + GH+AK+C EP +
Sbjct: 32 VSSSLPDICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDC--------KEPKREREQ 83
Query: 132 TCYVCGHQGHLSYDC 146
CY CG GHL+ DC
Sbjct: 84 CCYNCGKPGHLARDC 98
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 105 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 152
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 153 HLARECTIEAT 163
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 9/54 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT 58
+ ++CY C + GH +C + S + CY+C GH AREC E+
Sbjct: 120 TKVKCYRCGETGHVAINCSKTSE---------VNCYRCGESGHLARECTIEATA 164
>gi|452983542|gb|EME83300.1| hypothetical protein MYCFIDRAFT_136456, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 425
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 66/143 (46%), Gaps = 14/143 (9%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT----CYNCS 63
+C NC GH +C Q+ A KV I C CN GH AR+C E + C NC
Sbjct: 223 KCSNCQQLGHIAKNCEQEKQEPA--GKVVITCAVCNAEGHRARDCTQERKSDKRGCKNCG 280
Query: 64 GQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
+ H+ K+C K+ +C NC GH C N+ +C C + GH +++C P
Sbjct: 281 SEDHMVKECPTKAPDVCRNCGEEGHRKTECTNERQMQCRNCDKWGHASRDC--------P 332
Query: 124 EPVVDMSLTCYVCGHQGHLSYDC 146
EP + C C GH S DC
Sbjct: 333 EPKNMDKVQCRNCDEFGHNSRDC 355
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 59/139 (42%), Gaps = 23/139 (16%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARG---------------DKVGIVCYKCNNYGHFAR 50
I C C GH C Q+ +D RG K VC C GH
Sbjct: 249 VITCAVCNAEGHRARDCTQERKSDKRGCKNCGSEDHMVKECPTKAPDVCRNCGEEGHRKT 308
Query: 51 ECATE-SVTCYNCSGQGHVAKDCTVKSS---IICYNCNSSGHFARNCPN--DSSK-RCYA 103
EC E + C NC GH ++DC + + C NC+ GH +R+CP D S+ C
Sbjct: 309 ECTNERQMQCRNCDKWGHASRDCPEPKNMDKVQCRNCDEFGHNSRDCPQPTDWSRVECSN 368
Query: 104 CHQAGHMAKECPGQTAGKS 122
CH+ GH K C + AGK
Sbjct: 369 CHEKGHTYKRCT-KPAGKE 386
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 12/85 (14%)
Query: 42 CNNYGHFARECATE-------SVTCYNCSGQGHVAKDCT---VKSSII--CYNCNSSGHF 89
C + GHFAR+C + C+NC GH DCT V+ C C + GH
Sbjct: 2 CGDEGHFARDCPEPRKDGGGLTGECFNCGEVGHNKADCTNPRVEREFTGTCNGCGAQGHR 61
Query: 90 ARNCPNDSSKRCYACHQAGHMAKEC 114
CP +RC CHQ GH+ EC
Sbjct: 62 KAECPVAPPRRCKVCHQDGHVTSEC 86
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 100 RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
+C C Q GH+AK C + EP + +TC VC +GH + DC +KS
Sbjct: 223 KCSNCQQLGHIAKNCEQEKQ----EPAGKVVITCAVCNAEGHRARDCTQERKS 271
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 37/96 (38%), Gaps = 22/96 (22%)
Query: 62 CSGQGHVAKDCTVKS------SIICYNCNSSGHFARNCPNDSSKR-----CYACHQAGHM 110
C +GH A+DC + C+NC GH +C N +R C C GH
Sbjct: 2 CGDEGHFARDCPEPRKDGGGLTGECFNCGEVGHNKADCTNPRVEREFTGTCNGCGAQGHR 61
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
ECP V C VC GH++ +C
Sbjct: 62 KAECP-----------VAPPRRCKVCHQDGHVTSEC 86
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 12/73 (16%)
Query: 83 CNSSGHFARNCPNDS------SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVC 136
C GHFAR+CP + C+ C + GH +C +P + + TC C
Sbjct: 2 CGDEGHFARDCPEPRKDGGGLTGECFNCGEVGHNKADC------TNPRVEREFTGTCNGC 55
Query: 137 GHQGHLSYDCKLV 149
G QGH +C +
Sbjct: 56 GAQGHRKAECPVA 68
>gi|213404984|ref|XP_002173264.1| cellular nucleic acid-binding protein [Schizosaccharomyces
japonicus yFS275]
gi|212001311|gb|EEB06971.1| cellular nucleic acid-binding protein [Schizosaccharomyces
japonicus yFS275]
Length = 175
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 34 KVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARN 92
+ G CY CN GH AREC S+ CYNC+ GH A +C+ + CYNC ++GH R+
Sbjct: 11 RTGPRCYNCNEIGHQARECVKGSI-CYNCNQTGHKANECSEPQREKACYNCGTAGHLVRD 69
Query: 93 CPN-----DSSKRCYACHQAGHMAKEC--PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYD 145
CP ++ CY C + GH+A+ C G AG P +L CY CG GH + D
Sbjct: 70 CPTAPPNPRANAECYKCGRVGHIARACRTSGPAAGGRP---GRSNLNCYACGSFGHQARD 126
Query: 146 C 146
C
Sbjct: 127 C 127
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 68/157 (43%), Gaps = 41/157 (26%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT--ESVTCYNCSGQ 65
+CYNC + GH C + G +CY CN GH A EC+ CYNC
Sbjct: 15 RCYNCNEIGHQARECVK-----------GSICYNCNQTGHKANECSEPQREKACYNCGTA 63
Query: 66 GHVAKDCTV-----KSSIICYNCNSSGHFARNC----------PNDSSKRCYACHQAGHM 110
GH+ +DC +++ CY C GH AR C P S+ CYAC GH
Sbjct: 64 GHLVRDCPTAPPNPRANAECYKCGRVGHIARACRTSGPAAGGRPGRSNLNCYACGSFGHQ 123
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
A++C + CY CG GH S++C+
Sbjct: 124 ARDC-------------TQGVKCYSCGKTGHRSFECE 147
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 66/156 (42%), Gaps = 40/156 (25%)
Query: 9 CYNCFDFGHYQYSC--PQKSSADARGDKVGIVCYKCNNYGHFARECATE------SVTCY 60
CYNC GH C PQ+ A CY C GH R+C T + CY
Sbjct: 35 CYNCNQTGHKANECSEPQREKA----------CYNCGTAGHLVRDCPTAPPNPRANAECY 84
Query: 61 NCSGQGHVAKDCTV----------KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
C GH+A+ C +S++ CY C S GH AR+C +CY+C + GH
Sbjct: 85 KCGRVGHIARACRTSGPAAGGRPGRSNLNCYACGSFGHQARDC--TQGVKCYSCGKTGHR 142
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ EC G+ CY C GH++ DC
Sbjct: 143 SFECEQSGGGQ----------LCYKCNQPGHIAVDC 168
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVG---IVCYKCNNYGHFARECATESVTCYN 61
+ +CY C GH +C ++S A G + G + CY C ++GH AR+C T+ V CY+
Sbjct: 79 ANAECYKCGRVGHIARAC--RTSGPAAGGRPGRSNLNCYACGSFGHQARDC-TQGVKCYS 135
Query: 62 CSGQGHVAKDCTVKSS-IICYNCNSSGHFARNC 93
C GH + +C +CY CN GH A +C
Sbjct: 136 CGKTGHRSFECEQSGGGQLCYKCNQPGHIAVDC 168
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 8/54 (14%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV 57
T ++CY+C GH + C Q G +CYKCN GH A +CA +
Sbjct: 128 TQGVKCYSCGKTGHRSFECEQSGG--------GQLCYKCNQPGHIAVDCAQAPI 173
>gi|7263180|gb|AAF44119.1| cellular nucleic acid binding protein mutant H128D [synthetic
construct]
Length = 178
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 74/173 (42%), Gaps = 29/173 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR-------------------GDKVGIVCYKCNNY 45
S+ +C+ C GH+ CP + +CY+C
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 46 GHFARECATESVTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCY 102
GH A++C + CYNC GH+AKDC + CYNC GH AR+C + ++CY
Sbjct: 62 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDCEHADEQKCY 121
Query: 103 ACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+C + G + K+C G T + + CY CG GHL+ +C +
Sbjct: 122 SCGEFGDIQKDCTKVKCYRCGDTGHVAINCSKTSEVNCYRCGESGHLARECTI 174
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 10/79 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSS---------ADARGDKVGIVCYKCNNYGHFARECA-TESVT 58
CYNC GH C D + D + CY+C + GH A C+ T V
Sbjct: 99 CYNCGKPGHLARDCEHADEQKCYSCGEFGDIQKDCTKVKCYRCGDTGHVAINCSKTSEVN 158
Query: 59 CYNCSGQGHVAKDCTVKSS 77
CY C GH+A++CT++++
Sbjct: 159 CYRCGESGHLARECTIEAT 177
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 40/105 (38%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR----------------------------CYACHQA 107
SS C+ C +GH+AR CP + CY C ++
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
GH+AK+C Q CY CG GH++ DCK +K
Sbjct: 62 GHLAKDCDLQED------------ACYNCGRGGHIAKDCKEPRKE 94
>gi|348540577|ref|XP_003457764.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 1
[Oreochromis niloticus]
Length = 161
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 75/157 (47%), Gaps = 12/157 (7%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKV--GIVCYKCNNYGHFARECATESVTCYN 61
S+ +C+ C GH+ +CP +G + CY+C GH AR+C CYN
Sbjct: 1 MSSNECFGCGHSGHWVKNCPSGGRGRGKGRGRGKDLFCYRCGELGHVARDCERTEDACYN 60
Query: 62 CSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP--- 115
C + H+++DC + +CYNC +GH ARNC + ++CY+C GH+ K C
Sbjct: 61 CGREDHISRDCKEPKKEREQLCYNCGKAGHMARNCNHAHEQKCYSCGSFGHIQKCCEKVK 120
Query: 116 ----GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
G+ + L CY G GHL+ +C +
Sbjct: 121 CYRCGEIGHVAVHCSKASELNCYNYGKSGHLAKECTI 157
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES-VTCYNCSGQG 66
+CY+C FGH Q C + + CY+C GH A C+ S + CYN G
Sbjct: 102 KCYSCGSFGHIQKCCEK------------VKCYRCGEIGHVAVHCSKASELNCYNYGKSG 149
Query: 67 HVAKDCTVKSS 77
H+AK+CT++++
Sbjct: 150 HLAKECTIEAT 160
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 23/88 (26%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR-----------CYACHQAGHMAKECPGQTAGKSPE 124
SS C+ C SGH+ +NCP+ R CY C + GH+A++C E
Sbjct: 2 SSNECFGCGHSGHWVKNCPSGGRGRGKGRGRGKDLFCYRCGELGHVARDC---------E 52
Query: 125 PVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
D CY CG + H+S DCK +K
Sbjct: 53 RTED---ACYNCGREDHISRDCKEPKKE 77
>gi|324508138|gb|ADY43440.1| DNA-binding protein HEXBP [Ascaris suum]
Length = 172
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 76/169 (44%), Gaps = 48/169 (28%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSS----------------------ADARGDK--VGI 37
S+++ +CY C + GH+ +CP + S A+ G + G
Sbjct: 3 SNSAEDECYKCHEKGHFARNCPNQESGARRGAGGARHRAACIACVVQSAEYGGSRRVAGG 62
Query: 38 VCYKCNNYGHFARECATESV----------------TCYNCSGQGHVAKDCTVK-----S 76
CY C GHFAREC ++ CY C G GH A++C
Sbjct: 63 DCYNCGQPGHFARECPSQRGGGGRYGGRGGGRGGQSECYQCGGYGHFARECPSDRRGGGG 122
Query: 77 SIICYNCNSSGHFARNCP---NDSSKRCYACHQAGHMAKECPGQTAGKS 122
CYNC GH +R CP +D SKRCY CHQ GH+++ECP + G++
Sbjct: 123 GQKCYNCGKFGHISRECPESGSDQSKRCYNCHQIGHISRECPEEAMGRN 171
>gi|427783997|gb|JAA57450.1| Putative e3 ubiquitin ligase [Rhipicephalus pulchellus]
Length = 146
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 67/147 (45%), Gaps = 28/147 (19%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDK-------------------------VGIV 38
++T +CY C GH+ C Q + G +
Sbjct: 2 SATTECYKCHKLGHFARECFQDGGSGGGGRGGMGGGGGPRGGGRGASRGRMDYKPPIREK 61
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARNCPNDS 97
CYKCN GHFAR+C CY C+G GH++KDC + CYNC GH AR C +
Sbjct: 62 CYKCNRIGHFARDCKEAEDRCYRCNGTGHISKDCQHGPDEMSCYNCGKMGHIAREC-KEQ 120
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPE 124
K CY CH+ GH++++C Q + PE
Sbjct: 121 EKTCYICHKQGHISRDCE-QDERRRPE 146
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 53/152 (34%)
Query: 39 CYKCNNYGHFARECATESV-----------------------------------TCYNCS 63
CYKC+ GHFAREC + CY C+
Sbjct: 7 CYKCHKLGHFARECFQDGGSGGGGRGGMGGGGGPRGGGRGASRGRMDYKPPIREKCYKCN 66
Query: 64 GQGHVAKDCTVKSSIICYNCNSSGHFARNC---PNDSSKRCYACHQAGHMAKECPGQTAG 120
GH A+DC ++ CY CN +GH +++C P++ S CY C + GH+A+EC Q
Sbjct: 67 RIGHFARDCK-EAEDRCYRCNGTGHISKDCQHGPDEMS--CYNCGKMGHIARECKEQEK- 122
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
TCY+C QGH+S DC+ ++
Sbjct: 123 -----------TCYICHKQGHISRDCEQDERR 143
>gi|187608726|ref|NP_001120664.1| cellular nucleic acid-binding protein isoform 1 [Homo sapiens]
gi|291393354|ref|XP_002713209.1| PREDICTED: zinc finger protein 9 isoform 1 [Oryctolagus cuniculus]
gi|355564532|gb|EHH21032.1| hypothetical protein EGK_04008 [Macaca mulatta]
gi|355786375|gb|EHH66558.1| hypothetical protein EGM_03574 [Macaca fascicularis]
Length = 179
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 30/174 (17%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADA-------------RG-----DKVGIVCYKCNNYG 46
S+ +C+ C GH+ CP RG + +CY+C G
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESG 61
Query: 47 HFARECATES--VTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRC 101
H A++C + CYNC GH+AKDC + CYNC GH AR+C + ++C
Sbjct: 62 HLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKC 121
Query: 102 YACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
Y+C + GH+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 122 YSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 175
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 120 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 167
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 168 HLARECTIEAT 178
>gi|407919077|gb|EKG12332.1| Zinc finger CCHC-type protein [Macrophomina phaseolina MS6]
Length = 495
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 63/114 (55%), Gaps = 13/114 (11%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQGH 67
C NC FGH CP+ SA+ G+ C KC+ GHF+ +C T +TC NC +GH
Sbjct: 335 CRNCKQFGHNSRDCPEPRSAE------GVECRKCHEMGHFSNDCPNTPKMTCRNCGEEGH 388
Query: 68 VAKDCTVK---SSIICYNCNSSGHFARNC--PNDSSK-RCYACHQAGHMAKECP 115
A +C+ S++ C NC+ GHF++ C P D S+ +C C + GH K CP
Sbjct: 389 KASECSKPRDPSTVTCRNCDELGHFSKECPKPRDWSRVKCSICEEMGHGPKRCP 442
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CYNCSG 64
+C NC GH + +C ++ A + + C C+ GH AR+C E + C NC
Sbjct: 283 KCDNCGGLGHTRRACKEEREEPA--GRPEVKCMVCSELGHRARDCKQERINPFLCRNCKQ 340
Query: 65 QGHVAKDCTVKSS---IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGK 121
GH ++DC S + C C+ GHF+ +CPN C C + GH A EC
Sbjct: 341 FGHNSRDCPEPRSAEGVECRKCHEMGHFSNDCPNTPKMTCRNCGEEGHKASEC------- 393
Query: 122 SPEPVVDMSLTCYVCGHQGHLSYDC 146
+P ++TC C GH S +C
Sbjct: 394 -SKPRDPSTVTCRNCDELGHFSKEC 417
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 42/109 (38%), Gaps = 15/109 (13%)
Query: 38 VCYKCNNYGHFARECATESVT---CYNCSGQGHVAKDCTVKSSIICYN-----CNSSGHF 89
C C+ GHFAR+C C+NC G+ DCT +N C GH
Sbjct: 61 ACRNCDEEGHFARDCPQPKKMAGECFNCGEVGYNKADCTNPKVDRPFNGECRICKEIGHP 120
Query: 90 ARNCPNDSSKRCYACHQAGHMAKECPGQTA-------GKSPEPVVDMSL 131
A CP C C + GH+ EC A K+ E DM +
Sbjct: 121 AAQCPQKPPTTCKNCLKEGHVTSECTAARAVNFAGIEDKTDEEAWDMLI 169
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 18/95 (18%)
Query: 59 CYNCSGQGHVAKDCTVKSSII--CYNCNSSGHFARNCPNDSSKR-----CYACHQAGHMA 111
C NC +GH A+DC + C+NC G+ +C N R C C + GH A
Sbjct: 62 CRNCDEEGHFARDCPQPKKMAGECFNCGEVGYNKADCTNPKVDRPFNGECRICKEIGHPA 121
Query: 112 KECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+CP + TC C +GH++ +C
Sbjct: 122 AQCPQKPP-----------TTCKNCLKEGHVTSEC 145
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 20/90 (22%)
Query: 9 CYNCFDFGHYQYSCPQK---------------SSADARGDKVGIV----CYKCNNYGHFA 49
C NC + GH+ CPQ + AD KV C C GH A
Sbjct: 62 CRNCDEEGHFARDCPQPKKMAGECFNCGEVGYNKADCTNPKVDRPFNGECRICKEIGHPA 121
Query: 50 RECATES-VTCYNCSGQGHVAKDCTVKSSI 78
+C + TC NC +GHV +CT ++
Sbjct: 122 AQCPQKPPTTCKNCLKEGHVTSECTAARAV 151
>gi|58004789|gb|AAW62456.1| cellular nucleic acid binding protein mutant H128A [synthetic
construct]
Length = 178
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 74/173 (42%), Gaps = 29/173 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR-------------------GDKVGIVCYKCNNY 45
S+ +C+ C GH+ CP + +CY+C
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 46 GHFARECATESVTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCY 102
GH A++C + CYNC GH+AKDC + CYNC GH AR+C + ++CY
Sbjct: 62 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDCEHADEQKCY 121
Query: 103 ACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+C + G + K+C G T + + CY CG GHL+ +C +
Sbjct: 122 SCGEFGAIQKDCTKVKCYRCGDTGHVAINCSKTSEVNCYRCGESGHLARECTI 174
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FG Q C + + CY+C + GH A C+ T V CY C G
Sbjct: 119 KCYSCGEFGAIQKDCTK------------VKCYRCGDTGHVAINCSKTSEVNCYRCGESG 166
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 167 HLARECTIEAT 177
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 40/105 (38%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR----------------------------CYACHQA 107
SS C+ C +GH+AR CP + CY C ++
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
GH+AK+C Q CY CG GH++ DCK +K
Sbjct: 62 GHLAKDCDLQED------------ACYNCGRGGHIAKDCKEPRKE 94
>gi|366986513|ref|XP_003673023.1| hypothetical protein NCAS_0A00720 [Naumovozyma castellii CBS 4309]
gi|342298886|emb|CCC66632.1| hypothetical protein NCAS_0A00720 [Naumovozyma castellii CBS 4309]
Length = 161
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 70/158 (44%), Gaps = 35/158 (22%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSG 64
S CYNC GH Q CP+ + + + CY C GH EC + CYNC+
Sbjct: 21 SEKLCYNCNKPGHVQSECPEPRTVEHK------QCYNCGETGHVKSECTVQR--CYNCNQ 72
Query: 65 QGHVAKDCTV----------------KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAG 108
GH++KDC + + CY C H A++CP SK CY+C + G
Sbjct: 73 TGHISKDCPEPRKPREPRNNGRFGANRHGMTCYKCGEPNHMAKDCPQSESK-CYSCGKFG 131
Query: 109 HMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
HM+++CP K CY C GH+S DC
Sbjct: 132 HMSRDCPDGPKEK----------VCYNCNETGHISRDC 159
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 68/162 (41%), Gaps = 46/162 (28%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TESVTCY 60
S C+ C GH C + +CY CN GH EC E CY
Sbjct: 2 SQKACFVCGKIGHLAEDCDSEK-----------LCYNCNKPGHVQSECPEPRTVEHKQCY 50
Query: 61 NCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR----------------CYAC 104
NC GHV +CTV+ CYNCN +GH +++CP R CY C
Sbjct: 51 NCGETGHVKSECTVQR---CYNCNQTGHISKDCPEPRKPREPRNNGRFGANRHGMTCYKC 107
Query: 105 HQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ HMAK+CP Q+ K CY CG GH+S DC
Sbjct: 108 GEPNHMAKDCP-QSESK-----------CYSCGKFGHMSRDC 137
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
Query: 1 MSSTSTIQ-CYNCFDFGHYQYSCPQ-------KSSADARGDKVGIVCYKCNNYGHFAREC 52
+ S T+Q CYNC GH CP+ +++ ++ G+ CYKC H A++C
Sbjct: 58 VKSECTVQRCYNCNQTGHISKDCPEPRKPREPRNNGRFGANRHGMTCYKCGEPNHMAKDC 117
Query: 53 ATESVTCYNCSGQGHVAKDCTV-KSSIICYNCNSSGHFARNCPN 95
CY+C GH+++DC +CYNCN +GH +R+CPN
Sbjct: 118 PQSESKCYSCGKFGHMSRDCPDGPKEKVCYNCNETGHISRDCPN 161
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 31/126 (24%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE------------ 55
QCYNC + GH + C + CY CN GH +++C
Sbjct: 48 QCYNCGETGHVKSECTVQR------------CYNCNQTGHISKDCPEPRKPREPRNNGRF 95
Query: 56 -----SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGH 109
+TCY C H+AKDC +S CY+C GH +R+CP+ ++ CY C++ GH
Sbjct: 96 GANRHGMTCYKCGEPNHMAKDCP-QSESKCYSCGKFGHMSRDCPDGPKEKVCYNCNETGH 154
Query: 110 MAKECP 115
++++CP
Sbjct: 155 ISRDCP 160
>gi|190347077|gb|EDK39288.2| hypothetical protein PGUG_03386 [Meyerozyma guilliermondii ATCC
6260]
Length = 175
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 75/163 (46%), Gaps = 37/163 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT--ESVTCYNCSGQG 66
CYNC GH CP+ + CY C + GH +C T + CYNC G
Sbjct: 29 CYNCRKPGHESTECPEPKQPSQK------QCYSCGDLGHVQSDCPTSAQGAKCYNCGQFG 82
Query: 67 HVAKDCT------------------VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAG 108
H++K+C+ K+ CY C HFAR+C S +CYAC +AG
Sbjct: 83 HISKNCSEGGRPAAASTGSAPAPKFSKNGTTCYKCGGPNHFARDC-QAGSLKCYACGKAG 141
Query: 109 HMAKEC-PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
H++K+C G AG + TCY CG GH+S DC+ Q
Sbjct: 142 HISKDCNAGGDAG---------AKTCYNCGKAGHISRDCEESQ 175
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQK---------SSADARGDKVGIVCYKCNNYGHFAREC 52
+S +CYNC FGH +C + S+ + K G CYKC HFAR+C
Sbjct: 68 TSAQGAKCYNCGQFGHISKNCSEGGRPAAASTGSAPAPKFSKNGTTCYKCGGPNHFARDC 127
Query: 53 ATESVTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNC 93
S+ CY C GH++KDC + CYNC +GH +R+C
Sbjct: 128 QAGSLKCYACGKAGHISKDCNAGGDAGAKTCYNCGKAGHISRDC 171
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 55/121 (45%), Gaps = 11/121 (9%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCP 94
CYKC GH A C CYNC GH + +C S CY+C GH +CP
Sbjct: 8 TCYKCGEVGHLADNCQQTERLCYNCRKPGHESTECPEPKQPSQKQCYSCGDLGHVQSDCP 67
Query: 95 NDS-SKRCYACHQAGHMAKEC------PGQTAGKSPEPVVDMS-LTCYVCGHQGHLSYDC 146
+ +CY C Q GH++K C + G +P P + TCY CG H + DC
Sbjct: 68 TSAQGAKCYNCGQFGHISKNCSEGGRPAAASTGSAPAPKFSKNGTTCYKCGGPNHFARDC 127
Query: 147 K 147
+
Sbjct: 128 Q 128
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 12/60 (20%)
Query: 99 KRCYACHQAGHMAKEC------------PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY C + GH+A C PG + + PEP CY CG GH+ DC
Sbjct: 7 RTCYKCGEVGHLADNCQQTERLCYNCRKPGHESTECPEPKQPSQKQCYSCGDLGHVQSDC 66
>gi|146416071|ref|XP_001484005.1| hypothetical protein PGUG_03386 [Meyerozyma guilliermondii ATCC
6260]
Length = 175
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 75/163 (46%), Gaps = 37/163 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT--ESVTCYNCSGQG 66
CYNC GH CP+ + CY C + GH +C T + CYNC G
Sbjct: 29 CYNCRKPGHESTECPEPKQPSQK------QCYSCGDLGHVQLDCPTSAQGAKCYNCGQFG 82
Query: 67 HVAKDCT------------------VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAG 108
H++K+C+ K+ CY C HFAR+C S +CYAC +AG
Sbjct: 83 HISKNCSEGGRPAAASTGSAPAPKFSKNGTTCYKCGGPNHFARDC-QAGSLKCYACGKAG 141
Query: 109 HMAKEC-PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
H++K+C G AG + TCY CG GH+S DC+ Q
Sbjct: 142 HISKDCNAGGDAG---------AKTCYNCGKAGHISRDCEESQ 175
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQK---------SSADARGDKVGIVCYKCNNYGHFAREC 52
+S +CYNC FGH +C + S+ + K G CYKC HFAR+C
Sbjct: 68 TSAQGAKCYNCGQFGHISKNCSEGGRPAAASTGSAPAPKFSKNGTTCYKCGGPNHFARDC 127
Query: 53 ATESVTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNC 93
S+ CY C GH++KDC + CYNC +GH +R+C
Sbjct: 128 QAGSLKCYACGKAGHISKDCNAGGDAGAKTCYNCGKAGHISRDC 171
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 55/121 (45%), Gaps = 11/121 (9%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCP 94
CYKC GH A C CYNC GH + +C S CY+C GH +CP
Sbjct: 8 TCYKCGEVGHLADNCQQTERLCYNCRKPGHESTECPEPKQPSQKQCYSCGDLGHVQLDCP 67
Query: 95 NDS-SKRCYACHQAGHMAKEC------PGQTAGKSPEPVVDMS-LTCYVCGHQGHLSYDC 146
+ +CY C Q GH++K C + G +P P + TCY CG H + DC
Sbjct: 68 TSAQGAKCYNCGQFGHISKNCSEGGRPAAASTGSAPAPKFSKNGTTCYKCGGPNHFARDC 127
Query: 147 K 147
+
Sbjct: 128 Q 128
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 12/60 (20%)
Query: 99 KRCYACHQAGHMAKEC------------PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY C + GH+A C PG + + PEP CY CG GH+ DC
Sbjct: 7 RTCYKCGEVGHLADNCQQTERLCYNCRKPGHESTECPEPKQPSQKQCYSCGDLGHVQLDC 66
>gi|71004674|ref|XP_757003.1| hypothetical protein UM00856.1 [Ustilago maydis 521]
gi|46096697|gb|EAK81930.1| hypothetical protein UM00856.1 [Ustilago maydis 521]
Length = 189
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 60/126 (47%), Gaps = 21/126 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----------- 57
CY C + GH CP ++ G CYKC +GH AR C T
Sbjct: 62 CYKCSETGHISRECP--TNPAPAAGGPGGECYKCGQHGHIARACPTAGGSSRGGFGGARS 119
Query: 58 ---TCYNCSGQGHVAKDCTVKSSII-----CYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
+CYNC G GH++++CT + CYNCN SGH +R CP +K CY C GH
Sbjct: 120 GGRSCYNCGGVGHLSRECTSPAGAAAGGQRCYNCNESGHISRECPKPQTKSCYRCGDEGH 179
Query: 110 MAKECP 115
++ CP
Sbjct: 180 LSAACP 185
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 70/167 (41%), Gaps = 45/167 (26%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT--------CY 60
CYNC GH C ++ CYKC+ GH +REC T CY
Sbjct: 40 CYNCGQQGHISSQCGMEAQPK--------TCYKCSETGHISRECPTNPAPAAGGPGGECY 91
Query: 61 NCSGQGHVAKDCTVKSSII-------------CYNCNSSGHFARNCPNDSS-----KRCY 102
C GH+A+ C CYNC GH +R C + + +RCY
Sbjct: 92 KCGQHGHIARACPTAGGSSRGGFGGARSGGRSCYNCGGVGHLSRECTSPAGAAAGGQRCY 151
Query: 103 ACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
C+++GH+++ECP + +CY CG +GHLS C +
Sbjct: 152 NCNESGHISRECP-----------KPQTKSCYRCGDEGHLSAACPQI 187
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 11/112 (9%)
Query: 46 GHFARECATE-SVTCYNCSGQGHVAKDCTVKSSI-ICYNCNSSGHFARNCPND------- 96
GH A C T + +CYNC QGH++ C +++ CY C+ +GH +R CP +
Sbjct: 26 GHNAAACPTAGNPSCYNCGQQGHISSQCGMEAQPKTCYKCSETGHISRECPTNPAPAAGG 85
Query: 97 SSKRCYACHQAGHMAKECP--GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C Q GH+A+ CP G ++ +CY CG GHLS +C
Sbjct: 86 PGGECYKCGQHGHIARACPTAGGSSRGGFGGARSGGRSCYNCGGVGHLSREC 137
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 63 SGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS-SKRCYACHQAGHMAKECPGQTAGK 121
S GH A C + CYNC GH + C ++ K CY C + GH+++ECP A
Sbjct: 23 SSAGHNAAACPTAGNPSCYNCGQQGHISSQCGMEAQPKTCYKCSETGHISRECPTNPAPA 82
Query: 122 SPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
+ CY CG GH++ C
Sbjct: 83 A----GGPGGECYKCGQHGHIARACPTA 106
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 12/81 (14%)
Query: 68 VAKDCTVKSSIICYNC--NSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEP 125
VA S ++C + +S+GH A CP + CY C Q GH++ +C G +P
Sbjct: 5 VADSTDPMSMLLCGDAPTSSAGHNAAACPTAGNPSCYNCGQQGHISSQC-----GMEAQP 59
Query: 126 VVDMSLTCYVCGHQGHLSYDC 146
TCY C GH+S +C
Sbjct: 60 K-----TCYKCSETGHISREC 75
>gi|384486824|gb|EIE79004.1| hypothetical protein RO3G_03709 [Rhizopus delemar RA 99-880]
Length = 160
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 59/124 (47%), Gaps = 21/124 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-------------- 54
CY C GH C Q S D G CY CN GH +R+C
Sbjct: 42 CYKCSQPGHMSRDCTQSSYTD------GPTCYSCNQVGHMSRDCPEGNSGGYSSRGGYGG 95
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKE 113
+CY C GH ++DCT S CYNC +SGH +R+C + R CY C Q GH+A++
Sbjct: 96 SRASCYTCGQSGHFSRDCTAGQSPKCYNCGNSGHISRDCDQPAQARACYKCQQVGHIARD 155
Query: 114 CPGQ 117
CP +
Sbjct: 156 CPSE 159
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 68/131 (51%), Gaps = 29/131 (22%)
Query: 34 KVGIVCYKCNNYGHFARECATESV--TCYNCSGQGHVAKDCTVKS---SIICYNCNSSGH 88
KV +CY C GH +++C CY CS GH+++DCT S CY+CN GH
Sbjct: 15 KVASLCYNCRQEGHMSKDCTEPPAEKLCYKCSQPGHMSRDCTQSSYTDGPTCYSCNQVGH 74
Query: 89 FARNCPNDSSKR-------------CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
+R+CP +S CY C Q+GH +++C TAG+SP+ CY
Sbjct: 75 MSRDCPEGNSGGYSSRGGYGGSRASCYTCGQSGHFSRDC---TAGQSPK--------CYN 123
Query: 136 CGHQGHLSYDC 146
CG+ GH+S DC
Sbjct: 124 CGNSGHISRDC 134
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 46 GHFARECATESVTCYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARNCPNDS---SKRC 101
GH AR+C+ + CYNC +GH++KDCT + +CY C+ GH +R+C S C
Sbjct: 7 GHQARDCSKVASLCYNCRQEGHMSKDCTEPPAEKLCYKCSQPGHMSRDCTQSSYTDGPTC 66
Query: 102 YACHQAGHMAKECP--GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
Y+C+Q GHM+++CP S +CY CG GH S DC Q
Sbjct: 67 YSCNQVGHMSRDCPEGNSGGYSSRGGYGGSRASCYTCGQSGHFSRDCTAGQ 117
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 35/155 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TESVTCYNCSG 64
CYNC GH C + + +CYKC+ GH +R+C T+ TCY+C+
Sbjct: 20 CYNCRQEGHMSKDCTEPPAEK--------LCYKCSQPGHMSRDCTQSSYTDGPTCYSCNQ 71
Query: 65 QGHVAKDCT-------------VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMA 111
GH+++DC S CY C SGHF+R+C S +CY C +GH++
Sbjct: 72 VGHMSRDCPEGNSGGYSSRGGYGGSRASCYTCGQSGHFSRDCTAGQSPKCYNCGNSGHIS 131
Query: 112 KECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++C ++ CY C GH++ DC
Sbjct: 132 RDCDQPAQARA----------CYKCQQVGHIARDC 156
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 8/50 (16%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE 55
+ +CYNC + GH C Q + A A CYKC GH AR+C +E
Sbjct: 118 SPKCYNCGNSGHISRDCDQPAQARA--------CYKCQQVGHIARDCPSE 159
>gi|146104178|ref|XP_001469751.1| universal minicircle sequence binding protein [Leishmania infantum
JPCM5]
gi|134074121|emb|CAM72863.1| universal minicircle sequence binding protein [Leishmania infantum
JPCM5]
Length = 115
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 66/121 (54%), Gaps = 16/121 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV--TCYNC 62
S I CY C + GH SCP+ + V CY C GH +R+C +E +CYNC
Sbjct: 2 SAITCYKCGEAGHMSRSCPRAA--------VTRSCYNCGETGHMSRDCPSERKPKSCYNC 53
Query: 63 SGQGHVAKDCTVKS-----SIICYNCNSSGHFARNCPNDSS-KRCYACHQAGHMAKECPG 116
H++++CT ++ + CYNC +GH +R+CPN+ K CY C H+++ECP
Sbjct: 54 GSTDHLSRECTNEAKAGADTRSCYNCGGTGHMSRDCPNERKPKSCYNCGSTDHLSRECPD 113
Query: 117 Q 117
+
Sbjct: 114 R 114
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 64/118 (54%), Gaps = 18/118 (15%)
Query: 37 IVCYKCNNYGHFARECATESVT--CYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNC 93
I CYKC GH +R C +VT CYNC GH+++DC + + CYNC S+ H +R C
Sbjct: 4 ITCYKCGEAGHMSRSCPRAAVTRSCYNCGETGHMSRDCPSERKPKSCYNCGSTDHLSREC 63
Query: 94 PNDS-----SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
N++ ++ CY C GHM+++CP + KS CY CG HLS +C
Sbjct: 64 TNEAKAGADTRSCYNCGGTGHMSRDCPNERKPKS----------CYNCGSTDHLSREC 111
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 11/78 (14%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
S+I CY C +GH +R+CP + R CY C + GHM+++CP + KS CY
Sbjct: 2 SAITCYKCGEAGHMSRSCPRAAVTRSCYNCGETGHMSRDCPSERKPKS----------CY 51
Query: 135 VCGHQGHLSYDCKLVQKS 152
CG HLS +C K+
Sbjct: 52 NCGSTDHLSRECTNEAKA 69
>gi|378730825|gb|EHY57284.1| cellular nucleic acid-binding protein [Exophiala dermatitidis
NIH/UT8656]
Length = 231
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
+T T QCY+C GH Q CP + G G CY C GH AR C T S
Sbjct: 47 TTETKQCYHCQGLGHVQADCP---TLRISGGPAGGRCYSCGQIGHLARNCPTPSAAPAPR 103
Query: 63 SGQGHVAKDCTVKSSII------CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
G+G S++ CY C H+AR+C + +CYAC + GH++++C
Sbjct: 104 GGRGGYGSGFRGGYSVVNNRAATCYKCGGPNHYARDC-QAQAMKCYACGKLGHISRDCTA 162
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
G P+ TCY CG GH+S DC +
Sbjct: 163 PNGG----PLNAAGKTCYKCGQPGHISKDCTTAE 192
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 61/134 (45%), Gaps = 24/134 (17%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
CYKC N GH+A C + CYNC GH + C + + CY+C GH +CP
Sbjct: 8 ACYKCGNVGHYAEVCTSSERLCYNCKQPGHESNQCPLPRTTETKQCYHCQGLGHVQADCP 67
Query: 95 N------DSSKRCYACHQAGHMAKECPGQTAGKSPEP---------------VVDMSLTC 133
+ RCY+C Q GH+A+ CP +A +P V + + TC
Sbjct: 68 TLRISGGPAGGRCYSCGQIGHLARNCPTPSAAPAPRGGRGGYGSGFRGGYSVVNNRAATC 127
Query: 134 YVCGHQGHLSYDCK 147
Y CG H + DC+
Sbjct: 128 YKCGGPNHYARDCQ 141
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
CY C + GH+A C S + CY C Q GH + +CP P + CY C
Sbjct: 9 CYKCGNVGHYAEVC-TSSERLCYNCKQPGHESNQCP--------LPRTTETKQCYHCQGL 59
Query: 140 GHLSYDCKLVQKS 152
GH+ DC ++ S
Sbjct: 60 GHVQADCPTLRIS 72
>gi|358395603|gb|EHK44990.1| hypothetical protein TRIATDRAFT_166172, partial [Trichoderma
atroviride IMI 206040]
Length = 404
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 70/145 (48%), Gaps = 15/145 (10%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+CYNC + H +C Q+ A +K I CY C N GH R+C V C NC
Sbjct: 236 KCYNCSELSHTSKACTQERVEHA-SEKPKISCYNCGNEGHRVRDCPEPRVDKFACKNCGK 294
Query: 65 QGHVAKDCTVK---SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGK 121
GH +C ++ C CN +GHFA++CP+ S+ C C Q GH++K+C
Sbjct: 295 SGHKIAECPEPPNMDNVECRKCNKTGHFAKDCPDGGSRACRNCGQEGHISKDC------- 347
Query: 122 SPEPVVDMSLTCYVCGHQGHLSYDC 146
+P +TC C GH S +C
Sbjct: 348 -DQPRNMDLVTCRNCEETGHYSKEC 371
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 64/158 (40%), Gaps = 22/158 (13%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT----ESV 57
S I CYNC + GH CP+ R DK C C GH EC ++V
Sbjct: 259 SEKPKISCYNCGNEGHRVRDCPE-----PRVDK--FACKNCGKSGHKIAECPEPPNMDNV 311
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP---NDSSKRCYACHQAGHMAKEC 114
C C+ GH AKDC S C NC GH +++C N C C + GH +KEC
Sbjct: 312 ECRKCNKTGHFAKDCPDGGSRACRNCGQEGHISKDCDQPRNMDLVTCRNCEETGHYSKEC 371
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
P+P + C C GH CK K
Sbjct: 372 --------PKPRDWSKVQCTNCEEYGHTKVRCKQPPKD 401
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 11 NCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-ESVTCYNCSGQGHVA 69
N +D G Y K + G+ C+ C GH EC E+ TC C +GH+
Sbjct: 24 NNYDDGGY------KGDVNDAGEYGNDKCFGCGEEGHRRAECPNAEAQTCRYCKKEGHMV 77
Query: 70 KDCTVKSSIICYNCNSSGHFARNCPN 95
KDC K + C NC GHF ++C N
Sbjct: 78 KDCPDKPPMTCGNCGEEGHFRKDCEN 103
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
C+ C GH CPN ++ C C + GHM K+CP + +TC CG +
Sbjct: 46 CFGCGEEGHRRAECPNAEAQTCRYCKKEGHMVKDCPDKPP-----------MTCGNCGEE 94
Query: 140 GHLSYDCKLVQK 151
GH DC+ +K
Sbjct: 95 GHFRKDCENARK 106
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
C+ C +GH +C + C C GH ++CP+ C C + GH K+C
Sbjct: 46 CFGCGEEGHRRAECPNAEAQTCRYCKKEGHMVKDCPDKPPMTCGNCGEEGHFRKDC 101
>gi|451994035|gb|EMD86507.1| hypothetical protein COCHEDRAFT_1116571 [Cochliobolus
heterostrophus C5]
Length = 450
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE---SVTCYNCSGQ 65
C NC + GH + C Q+ + + I C C GH AR+C E C NC +
Sbjct: 249 CGNCGELGHIRKYCKQEQ-VERDTHQPEIQCVNCKEIGHRARDCTKERFNPFACKNCKQE 307
Query: 66 GHVAKDCTVKSS---IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKS 122
GH AK+C S + C CN GHF+++CPN +++ C C HMAKEC ++
Sbjct: 308 GHNAKECPEPRSAEGVECRKCNEMGHFSKDCPNVAARTCRNCGSTEHMAKEC---YQPRN 364
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDC 146
P+ VV C C GH S DC
Sbjct: 365 PDTVV-----CRNCEQMGHFSRDC 383
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-TCYNCSGQGH 67
C NC GH CP+ SA+ G+ C KCN GHF+++C + TC NC H
Sbjct: 301 CKNCKQEGHNAKECPEPRSAE------GVECRKCNEMGHFSKDCPNVAARTCRNCGSTEH 354
Query: 68 VAKDC---TVKSSIICYNCNSSGHFARNCPN--DSSK-RCYACHQAGHMAKECPGQTA 119
+AK+C +++C NC GHF+R+CP D SK +C C + GH K C A
Sbjct: 355 MAKECYQPRNPDTVVCRNCEQMGHFSRDCPEPKDWSKHKCSNCGELGHGPKRCKAPIA 412
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 63/148 (42%), Gaps = 22/148 (14%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTCYNC 62
IQC NC + GH C ++ C C GH A+EC + E V C C
Sbjct: 276 IQCVNCKEIGHRARDCTKERFNP-------FACKNCKQEGHNAKECPEPRSAEGVECRKC 328
Query: 63 SGQGHVAKDCTVKSSIICYNCNSSGHFARNC---PNDSSKRCYACHQAGHMAKECPGQTA 119
+ GH +KDC ++ C NC S+ H A+ C N + C C Q GH +++C
Sbjct: 329 NEMGHFSKDCPNVAARTCRNCGSTEHMAKECYQPRNPDTVVCRNCEQMGHFSRDC----- 383
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
PEP C CG GH CK
Sbjct: 384 ---PEPKDWSKHKCSNCGELGHGPKRCK 408
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 37/102 (36%), Gaps = 23/102 (22%)
Query: 71 DCTVKSSIICYNCNSSGHFARNCPNDSSKR--------CYACHQAGHMAKEC-------- 114
D + +C NC GH + C + +R C C + GH A++C
Sbjct: 240 DVQDRGVPLCGNCGELGHIRKYCKQEQVERDTHQPEIQCVNCKEIGHRARDCTKERFNPF 299
Query: 115 -------PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
G A + PEP + C C GH S DC V
Sbjct: 300 ACKNCKQEGHNAKECPEPRSAEGVECRKCNEMGHFSKDCPNV 341
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 12/74 (16%)
Query: 80 CYNCNSSGHFARNCPNDS------SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTC 133
C C SGH+AR+CP+ + C+ C Q GH +C + + C
Sbjct: 47 CRICKQSGHYARDCPSKPEGGSGLTGECFNCGQVGHNKADCTNERVQRP------FDGVC 100
Query: 134 YVCGHQGHLSYDCK 147
+C GH + DCK
Sbjct: 101 KLCDQPGHRAIDCK 114
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 26 SSADARGDKVGIVCYKCNNYGHFARECATE-------SVTCYNCSGQGHVAKDCTVKS-- 76
+ ADA GD C C GH+AR+C ++ + C+NC GH DCT +
Sbjct: 37 AGADAGGDDS---CRICKQSGHYARDCPSKPEGGSGLTGECFNCGQVGHNKADCTNERVQ 93
Query: 77 ---SIICYNCNSSGHFARNC 93
+C C+ GH A +C
Sbjct: 94 RPFDGVCKLCDQPGHRAIDC 113
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 29/76 (38%), Gaps = 9/76 (11%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------TCYNC 62
C C GHY CP K G + C+ C GH +C E V C C
Sbjct: 47 CRICKQSGHYARDCPSKPEG---GSGLTGECFNCGQVGHNKADCTNERVQRPFDGVCKLC 103
Query: 63 SGQGHVAKDCTVKSSI 78
GH A DC + S+
Sbjct: 104 DQPGHRAIDCKSRRSV 119
>gi|146104175|ref|XP_001469750.1| putative universal minicircle sequence binding protein [Leishmania
infantum JPCM5]
gi|398024244|ref|XP_003865283.1| universal minicircle sequence binding protein, putative [Leishmania
donovani]
gi|134074120|emb|CAM72862.1| putative universal minicircle sequence binding protein [Leishmania
infantum JPCM5]
gi|322503520|emb|CBZ38606.1| universal minicircle sequence binding protein, putative [Leishmania
donovani]
Length = 115
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 67/121 (55%), Gaps = 16/121 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV--TCYNC 62
S I CY C + GH SCP+ ++ + CY C GH +R+C +E +CYNC
Sbjct: 2 SAITCYKCGEAGHMSRSCPRAAATRS--------CYNCGETGHMSRDCPSERKPKSCYNC 53
Query: 63 SGQGHVAKDCTVKS-----SIICYNCNSSGHFARNCPNDSS-KRCYACHQAGHMAKECPG 116
H++++CT ++ + CYNC +GH +R+CPN+ K CY C H+++ECP
Sbjct: 54 GSTDHLSRECTNEAKAGADTRSCYNCGGTGHLSRDCPNERKPKSCYNCGSTDHLSRECPD 113
Query: 117 Q 117
+
Sbjct: 114 R 114
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 63/118 (53%), Gaps = 18/118 (15%)
Query: 37 IVCYKCNNYGHFARECATESVT--CYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNC 93
I CYKC GH +R C + T CYNC GH+++DC + + CYNC S+ H +R C
Sbjct: 4 ITCYKCGEAGHMSRSCPRAAATRSCYNCGETGHMSRDCPSERKPKSCYNCGSTDHLSREC 63
Query: 94 PNDS-----SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
N++ ++ CY C GH++++CP + KS CY CG HLS +C
Sbjct: 64 TNEAKAGADTRSCYNCGGTGHLSRDCPNERKPKS----------CYNCGSTDHLSREC 111
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 11/78 (14%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
S+I CY C +GH +R+CP ++ R CY C + GHM+++CP + KS CY
Sbjct: 2 SAITCYKCGEAGHMSRSCPRAAATRSCYNCGETGHMSRDCPSERKPKS----------CY 51
Query: 135 VCGHQGHLSYDCKLVQKS 152
CG HLS +C K+
Sbjct: 52 NCGSTDHLSRECTNEAKA 69
>gi|449461615|ref|XP_004148537.1| PREDICTED: DNA-binding protein HEXBP-like [Cucumis sativus]
gi|449519884|ref|XP_004166964.1| PREDICTED: DNA-binding protein HEXBP-like [Cucumis sativus]
Length = 260
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 11/116 (9%)
Query: 31 RGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFA 90
RG +C C GHFAREC ++ C+NC GH+A +CT KS +C+NC GH A
Sbjct: 39 RGFSRDNLCKNCKRPGHFARECPNVAI-CHNCGLPGHIASECTTKS--LCWNCREPGHMA 95
Query: 91 RNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+CPN+ C+ C +AGH A++C TA P P D+ L C C QGH++ DC
Sbjct: 96 SSCPNEGI--CHTCGKAGHRARDC---TA--PPMPPGDLRL-CNNCYKQGHIAADC 143
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 78/183 (42%), Gaps = 55/183 (30%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------ 57
T+ C+NC + GH SCP + +C+ C GH AR+C +
Sbjct: 80 TTKSLCWNCREPGHMASSCPNEG-----------ICHTCGKAGHRARDCTAPPMPPGDLR 128
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG- 116
C NC QGH+A DCT + + C NC +GH AR+CPND C C+ +GH+A++CP
Sbjct: 129 LCNNCYKQGHIAADCTNEKA--CNNCRKTGHLARDCPNDPI--CNLCNVSGHVARQCPKS 184
Query: 117 ---------------------------------QTAGKSPEPVVDMSLTCYVCGHQGHLS 143
Q G + + C+ CG +GHL+
Sbjct: 185 NVLGDRGDRGISSGGGSGRGSGSGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLA 244
Query: 144 YDC 146
Y+C
Sbjct: 245 YEC 247
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NC GH+ CP + +C+ C GH A EC T+S+ C+NC GH+
Sbjct: 47 CKNCKRPGHFARECPNVA-----------ICHNCGLPGHIASECTTKSL-CWNCREPGHM 94
Query: 69 AKDCTVKSSIICYNCNSSGHFARNC-----PNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
A C + IC+ C +GH AR+C P + C C++ GH+A +C + A
Sbjct: 95 ASSCPNEG--ICHTCGKAGHRARDCTAPPMPPGDLRLCNNCYKQGHIAADCTNEKA---- 148
Query: 124 EPVVDMSLTCYVCGHQGHLSYDC 146
C C GHL+ DC
Sbjct: 149 ---------CNNCRKTGHLARDC 162
>gi|289540929|gb|ADD09600.1| zinc knuckle (ccHc-type) family protein [Trifolium repens]
Length = 256
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 51/179 (28%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----- 57
ST ++ C+NC + GH SCP + +C+ C GH AREC+ S+
Sbjct: 80 STKSV-CWNCKEPGHMANSCPNEG-----------ICHTCGKTGHRARECSAPSMPPGDL 127
Query: 58 -TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
C+NC QGH+A +CT + + C NC +GH AR+CPND C C+ +GH+A++CP
Sbjct: 128 RLCHNCYKQGHIAVECTNEKA--CNNCRKTGHLARDCPNDPI--CNVCNVSGHVARQCPK 183
Query: 117 -----------------------------QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
Q G + + C+ CG +GHL+Y+C
Sbjct: 184 SNVIGDHSGRGSFRGAGGGGYRDVMCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYEC 242
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 11/117 (9%)
Query: 30 ARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHF 89
+RG +C C GH+AREC +V C+NC GH+A +C+ KS +C+NC GH
Sbjct: 38 SRGFSRDNLCKNCKRPGHYARECPNVAV-CHNCGLPGHIASECSTKS--VCWNCKEPGHM 94
Query: 90 ARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
A +CPN+ C+ C + GH A+EC + P D+ L C+ C QGH++ +C
Sbjct: 95 ANSCPNEGI--CHTCGKTGHRARECSAPSM-----PPGDLRL-CHNCYKQGHIAVEC 143
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 66/143 (46%), Gaps = 32/143 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NC GHY CP + VC+ C GH A EC+T+SV C+NC GH+
Sbjct: 47 CKNCKRPGHYARECPNVA-----------VCHNCGLPGHIASECSTKSV-CWNCKEPGHM 94
Query: 69 AKDCTVKSSIICYNCNSSGHFARNC-----PNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
A C + IC+ C +GH AR C P + C+ C++ GH+A EC + A
Sbjct: 95 ANSCPNEG--ICHTCGKTGHRARECSAPSMPPGDLRLCHNCYKQGHIAVECTNEKA---- 148
Query: 124 EPVVDMSLTCYVCGHQGHLSYDC 146
C C GHL+ DC
Sbjct: 149 ---------CNNCRKTGHLARDC 162
>gi|401420034|ref|XP_003874506.1| universal minicircle sequence binding protein,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322490742|emb|CBZ26006.1| universal minicircle sequence binding protein,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 115
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 67/121 (55%), Gaps = 16/121 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV--TCYNC 62
S I CY C + GH SCP+ ++ + CY C GH +R+C +E +CYNC
Sbjct: 2 SAITCYKCGEAGHMSRSCPRAAATRS--------CYNCGETGHLSRDCPSERKPKSCYNC 53
Query: 63 SGQGHVAKDCTVKS-----SIICYNCNSSGHFARNCPNDSS-KRCYACHQAGHMAKECPG 116
H++++CT ++ + CYNC +GH +R+CPN+ K CY C H+++ECP
Sbjct: 54 GSTEHLSRECTNEAKAGADTRSCYNCGGTGHMSRDCPNERKPKSCYNCGSTEHLSRECPD 113
Query: 117 Q 117
+
Sbjct: 114 R 114
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 63/118 (53%), Gaps = 18/118 (15%)
Query: 37 IVCYKCNNYGHFARECATESVT--CYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNC 93
I CYKC GH +R C + T CYNC GH+++DC + + CYNC S+ H +R C
Sbjct: 4 ITCYKCGEAGHMSRSCPRAAATRSCYNCGETGHLSRDCPSERKPKSCYNCGSTEHLSREC 63
Query: 94 PNDS-----SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
N++ ++ CY C GHM+++CP + KS CY CG HLS +C
Sbjct: 64 TNEAKAGADTRSCYNCGGTGHMSRDCPNERKPKS----------CYNCGSTEHLSREC 111
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 11/78 (14%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
S+I CY C +GH +R+CP ++ R CY C + GH++++CP + KS CY
Sbjct: 2 SAITCYKCGEAGHMSRSCPRAAATRSCYNCGETGHLSRDCPSERKPKS----------CY 51
Query: 135 VCGHQGHLSYDCKLVQKS 152
CG HLS +C K+
Sbjct: 52 NCGSTEHLSRECTNEAKA 69
>gi|157876786|ref|XP_001686735.1| universal minicircle sequence binding protein [Leishmania major
strain Friedlin]
gi|68129810|emb|CAJ09116.1| universal minicircle sequence binding protein [Leishmania major
strain Friedlin]
Length = 175
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 16/121 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE--SVTCYNC 62
S + CY C + GH SCP+ ++ + CY C GH +R+C +E +CYNC
Sbjct: 62 SAVTCYKCGEAGHMSRSCPRAAATRS--------CYNCGETGHMSRDCPSERKPKSCYNC 113
Query: 63 SGQGHVAKDCTVKS-----SIICYNCNSSGHFARNCPND-SSKRCYACHQAGHMAKECPG 116
H++++CT ++ + CYNC +GH +R+CPN+ K CY C H+++ECP
Sbjct: 114 GSTDHLSRECTNEAKAGADTRSCYNCGGTGHLSRDCPNERKPKSCYNCGSTDHLSRECPD 173
Query: 117 Q 117
+
Sbjct: 174 R 174
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 18/119 (15%)
Query: 36 GIVCYKCNNYGHFARECATESVT--CYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARN 92
+ CYKC GH +R C + T CYNC GH+++DC + + CYNC S+ H +R
Sbjct: 63 AVTCYKCGEAGHMSRSCPRAAATRSCYNCGETGHMSRDCPSERKPKSCYNCGSTDHLSRE 122
Query: 93 CPNDS-----SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C N++ ++ CY C GH++++CP + KS CY CG HLS +C
Sbjct: 123 CTNEAKAGADTRSCYNCGGTGHLSRDCPNERKPKS----------CYNCGSTDHLSREC 171
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 15/100 (15%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE------S 56
+ +T CYNC + GH CP + + CY C + H +REC E +
Sbjct: 82 AAATRSCYNCGETGHMSRDCPSERKPKS--------CYNCGSTDHLSRECTNEAKAGADT 133
Query: 57 VTCYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNCPN 95
+CYNC G GH+++DC + CYNC S+ H +R CP+
Sbjct: 134 RSCYNCGGTGHLSRDCPNERKPKSCYNCGSTDHLSRECPD 173
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 11/80 (13%)
Query: 74 VKSSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAGKSPEPVVDMSLT 132
+ S++ CY C +GH +R+CP ++ R CY C + GHM+++CP + KS
Sbjct: 60 IMSAVTCYKCGEAGHMSRSCPRAAATRSCYNCGETGHMSRDCPSERKPKS---------- 109
Query: 133 CYVCGHQGHLSYDCKLVQKS 152
CY CG HLS +C K+
Sbjct: 110 CYNCGSTDHLSRECTNEAKA 129
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 12/66 (18%)
Query: 88 HFARNCPND--SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYD 145
HF R+ P+ S+ CY C +AGHM++ CP A +S CY CG GH+S D
Sbjct: 51 HFCRSRPSIIMSAVTCYKCGEAGHMSRSCPRAAATRS----------CYNCGETGHMSRD 100
Query: 146 CKLVQK 151
C +K
Sbjct: 101 CPSERK 106
>gi|401420036|ref|XP_003874507.1| universal minicircle sequence binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490743|emb|CBZ26007.1| universal minicircle sequence binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 182
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 67/121 (55%), Gaps = 16/121 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE--SVTCYNC 62
S I CY C + GH SCP+ ++ + CY C GH +R+C +E +CYNC
Sbjct: 69 SAITCYKCGEAGHMSRSCPRAAATRS--------CYNCGETGHMSRDCPSERKPKSCYNC 120
Query: 63 SGQGHVAKDCTVKS-----SIICYNCNSSGHFARNCPND-SSKRCYACHQAGHMAKECPG 116
H++++CT ++ + CYNC +GH +R+CPN+ K CY C H+++ECP
Sbjct: 121 GSTEHLSRECTNEAKAGADTRSCYNCGGTGHMSRDCPNERKPKSCYNCGSTEHLSRECPD 180
Query: 117 Q 117
+
Sbjct: 181 R 181
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 63/119 (52%), Gaps = 18/119 (15%)
Query: 36 GIVCYKCNNYGHFARECATESVT--CYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARN 92
I CYKC GH +R C + T CYNC GH+++DC + + CYNC S+ H +R
Sbjct: 70 AITCYKCGEAGHMSRSCPRAAATRSCYNCGETGHMSRDCPSERKPKSCYNCGSTEHLSRE 129
Query: 93 CPNDS-----SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C N++ ++ CY C GHM+++CP + KS CY CG HLS +C
Sbjct: 130 CTNEAKAGADTRSCYNCGGTGHMSRDCPNERKPKS----------CYNCGSTEHLSREC 178
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 11/74 (14%)
Query: 74 VKSSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAGKSPEPVVDMSLT 132
+ S+I CY C +GH +R+CP ++ R CY C + GHM+++CP + KS
Sbjct: 67 IMSAITCYKCGEAGHMSRSCPRAAATRSCYNCGETGHMSRDCPSERKPKS---------- 116
Query: 133 CYVCGHQGHLSYDC 146
CY CG HLS +C
Sbjct: 117 CYNCGSTEHLSREC 130
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 10/51 (19%)
Query: 101 CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
CY C +AGHM++ CP A +S CY CG GH+S DC +K
Sbjct: 73 CYKCGEAGHMSRSCPRAAATRS----------CYNCGETGHMSRDCPSERK 113
>gi|365988276|ref|XP_003670969.1| hypothetical protein NDAI_0F04080 [Naumovozyma dairenensis CBS 421]
gi|343769740|emb|CCD25726.1| hypothetical protein NDAI_0F04080 [Naumovozyma dairenensis CBS 421]
Length = 158
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 68/151 (45%), Gaps = 32/151 (21%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH Q CPQ + + + CY C GH EC + CYNC+ GH+
Sbjct: 25 CYNCNQPGHVQSECPQPRTVEHK------QCYNCGETGHVRSECTVQR--CYNCNQTGHI 76
Query: 69 AKDCTV-------------KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
+KDC S + CY C H A++C +S +CY C GH++++CP
Sbjct: 77 SKDCPEPKKPYNSNNRRGGNSRVSCYKCGGPNHMAKDC-TESDPKCYNCGNTGHLSRDCP 135
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
K TCY C GH+S DC
Sbjct: 136 EGPREK----------TCYKCNETGHISRDC 156
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 28/123 (22%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--------------A 53
QCYNC + GH + C + CY CN GH +++C
Sbjct: 48 QCYNCGETGHVRSECTVQR------------CYNCNQTGHISKDCPEPKKPYNSNNRRGG 95
Query: 54 TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN-DSSKRCYACHQAGHMAK 112
V+CY C G H+AKDCT +S CYNC ++GH +R+CP K CY C++ GH+++
Sbjct: 96 NSRVSCYKCGGPNHMAKDCT-ESDPKCYNCGNTGHLSRDCPEGPREKTCYKCNETGHISR 154
Query: 113 ECP 115
+CP
Sbjct: 155 DCP 157
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 69/159 (43%), Gaps = 43/159 (27%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTCY 60
S CY C GH C + +CY CN GH EC E CY
Sbjct: 2 SQRACYVCGKIGHLAEDCDSEK-----------LCYNCNQPGHVQSECPQPRTVEHKQCY 50
Query: 61 NCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP------NDSSKR-------CYACHQA 107
NC GHV +CTV+ CYNCN +GH +++CP N +++R CY C
Sbjct: 51 NCGETGHVRSECTVQR---CYNCNQTGHISKDCPEPKKPYNSNNRRGGNSRVSCYKCGGP 107
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
HMAK+C + CY CG+ GHLS DC
Sbjct: 108 NHMAKDC------------TESDPKCYNCGNTGHLSRDC 134
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 1 MSSTSTIQ-CYNCFDFGHYQYSCPQK----SSADARGDKVGIVCYKCNNYGHFARECATE 55
+ S T+Q CYNC GH CP+ +S + RG + CYKC H A++C
Sbjct: 58 VRSECTVQRCYNCNQTGHISKDCPEPKKPYNSNNRRGGNSRVSCYKCGGPNHMAKDCTES 117
Query: 56 SVTCYNCSGQGHVAKDCTV-KSSIICYNCNSSGHFARNCPN 95
CYNC GH+++DC CY CN +GH +R+CPN
Sbjct: 118 DPKCYNCGNTGHLSRDCPEGPREKTCYKCNETGHISRDCPN 158
>gi|157876783|ref|XP_001686734.1| putative universal minicircle sequence binding protein [Leishmania
major strain Friedlin]
gi|68129809|emb|CAJ09115.1| putative universal minicircle sequence binding protein [Leishmania
major strain Friedlin]
Length = 115
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 16/121 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV--TCYNC 62
S + CY C + GH SCP+ ++ + CY C GH +R+C +E +CYNC
Sbjct: 2 SAVTCYKCGEAGHMSRSCPRAAATRS--------CYNCGETGHMSRDCPSERKPKSCYNC 53
Query: 63 SGQGHVAKDCTVKS-----SIICYNCNSSGHFARNCPNDSS-KRCYACHQAGHMAKECPG 116
H++++CT ++ + CYNC +GH +R+CPN+ K CY C H+++ECP
Sbjct: 54 GSTDHLSRECTNEAKAGADTRSCYNCGGTGHLSRDCPNERKPKSCYNCGSTDHLSRECPD 113
Query: 117 Q 117
+
Sbjct: 114 R 114
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 18/118 (15%)
Query: 37 IVCYKCNNYGHFARECATESVT--CYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNC 93
+ CYKC GH +R C + T CYNC GH+++DC + + CYNC S+ H +R C
Sbjct: 4 VTCYKCGEAGHMSRSCPRAAATRSCYNCGETGHMSRDCPSERKPKSCYNCGSTDHLSREC 63
Query: 94 PNDS-----SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
N++ ++ CY C GH++++CP + KS CY CG HLS +C
Sbjct: 64 TNEAKAGADTRSCYNCGGTGHLSRDCPNERKPKS----------CYNCGSTDHLSREC 111
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 15/100 (15%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE------S 56
+ +T CYNC + GH CP ++ CY C + H +REC E +
Sbjct: 22 AAATRSCYNCGETGHMSRDCPS--------ERKPKSCYNCGSTDHLSRECTNEAKAGADT 73
Query: 57 VTCYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNCPN 95
+CYNC G GH+++DC + CYNC S+ H +R CP+
Sbjct: 74 RSCYNCGGTGHLSRDCPNERKPKSCYNCGSTDHLSRECPD 113
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 11/78 (14%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
S++ CY C +GH +R+CP ++ R CY C + GHM+++CP + KS CY
Sbjct: 2 SAVTCYKCGEAGHMSRSCPRAAATRSCYNCGETGHMSRDCPSERKPKS----------CY 51
Query: 135 VCGHQGHLSYDCKLVQKS 152
CG HLS +C K+
Sbjct: 52 NCGSTDHLSRECTNEAKA 69
>gi|160948183|emb|CAL91030.1| DEAD box helicase [Macrostomum lignano]
Length = 860
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
VCYKCN GHFAREC A+ CY CN S HFAR CPN
Sbjct: 295 VCYKCNQSGHFARECPN--------------AEAGGGGGGSGCYKCNQSSHFARECPNAD 340
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSP 123
++ C+ C + H++ +CP AG +P
Sbjct: 341 ARACFRCKETDHISADCPNVAAGDAP 366
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 36/74 (48%), Gaps = 17/74 (22%)
Query: 79 ICYNCNSSGHFARNCPNDSS------KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLT 132
+CY CN SGHFAR CPN + CY C+Q+ H A+ECP A
Sbjct: 295 VCYKCNQSGHFARECPNAEAGGGGGGSGCYKCNQSSHFARECPNADA-----------RA 343
Query: 133 CYVCGHQGHLSYDC 146
C+ C H+S DC
Sbjct: 344 CFRCKETDHISADC 357
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQGH 67
CY C GH+ CP +A+A G G CYKCN HFAREC ++ C+ C H
Sbjct: 296 CYKCNQSGHFARECP---NAEAGGGGGGSGCYKCNQSSHFARECPNADARACFRCKETDH 352
Query: 68 VAKDC 72
++ DC
Sbjct: 353 ISADC 357
>gi|358374535|dbj|GAA91126.1| zinc knuckle domain protein [Aspergillus kawachii IFO 4308]
Length = 228
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 74/174 (42%), Gaps = 41/174 (23%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---- 58
S+S CYNC GH SCP+ + + + CY C GH +C T +
Sbjct: 22 SSSERLCYNCKQPGHESSSCPRPRTTETK------QCYNCQGLGHVQADCPTLRLNGANG 75
Query: 59 -CYNCSGQGHVAKDCTVKSS-------------------------IICYNCNSSGHFARN 92
CYNCS GH+A++C +S CY C HFAR+
Sbjct: 76 RCYNCSQPGHLARNCPAPASGAPRAPAPRGGFNSGFRGGYGYPRAATCYKCGGPNHFARD 135
Query: 93 CPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C + K CYAC + GH++++C G P+ CY C GH+S DC
Sbjct: 136 CQAQAMK-CYACGKLGHISRDCTAPNGG----PLSSAGKVCYKCSQAGHISRDC 184
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 62/131 (47%), Gaps = 21/131 (16%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + CYNC GH +CP
Sbjct: 7 ACYKCGNIGHYAEVCSSSERLCYNCKQPGHESSSCPRPRTTETKQCYNCQGLGHVQADCP 66
Query: 95 ----NDSSKRCYACHQAGHMAKECPGQTAG--KSPEPV------------VDMSLTCYVC 136
N ++ RCY C Q GH+A+ CP +G ++P P + TCY C
Sbjct: 67 TLRLNGANGRCYNCSQPGHLARNCPAPASGAPRAPAPRGGFNSGFRGGYGYPRAATCYKC 126
Query: 137 GHQGHLSYDCK 147
G H + DC+
Sbjct: 127 GGPNHFARDCQ 137
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 65/150 (43%), Gaps = 39/150 (26%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-------- 54
+T T QCYNC GH Q CP A G CY C+ GH AR C
Sbjct: 46 TTETKQCYNCQGLGHVQADCPTLRLNGANGR-----CYNCSQPGHLARNCPAPASGAPRA 100
Query: 55 ------------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC--P 94
+ TCY C G H A+DC ++ + CY C GH +R+C P
Sbjct: 101 PAPRGGFNSGFRGGYGYPRAATCYKCGGPNHFARDCQAQA-MKCYACGKLGHISRDCTAP 159
Query: 95 N-----DSSKRCYACHQAGHMAKECPGQTA 119
N + K CY C QAGH++++CP A
Sbjct: 160 NGGPLSSAGKVCYKCSQAGHISRDCPNNEA 189
>gi|281200716|gb|EFA74934.1| hypothetical protein PPL_11968 [Polysphondylium pallidum PN500]
Length = 254
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 72/156 (46%), Gaps = 31/156 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES---------VTC 59
C+NC GH CP A G CY C N GH +REC +S C
Sbjct: 65 CFNCGKPGHISRECPD----GAAGAGNTGSCYNCGNTGHISRECPNKSERNDRSGGDRAC 120
Query: 60 YNCSGQGHVAKDCTVK-SSIICYNCNSSGHFARNCPNDSS--------KRCYACHQAGHM 110
+NC GH+++DCT SS C+ C +GH +R+C K+C+ C+Q GH+
Sbjct: 121 FNCGKTGHMSRDCTQGGSSAGCFKCGKTGHISRDCTESGGSDRGHGGDKKCFKCNQTGHI 180
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+++CP + +C+ CG GH S +C
Sbjct: 181 SRDCPNSDS---------QGPSCFNCGESGHKSREC 207
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 17/124 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR--GDKVGIVCYKCNNYGHFAREC--ATESVTCY 60
+T CYNC + GH CP KS + R GD+ C+ C GH +R+C S C+
Sbjct: 87 NTGSCYNCGNTGHISRECPNKSERNDRSGGDRA---CFNCGKTGHMSRDCTQGGSSAGCF 143
Query: 61 NCSGQGHVAKDCTVKSS--------IICYNCNSSGHFARNCPNDSSK--RCYACHQAGHM 110
C GH+++DCT C+ CN +GH +R+CPN S+ C+ C ++GH
Sbjct: 144 KCGKTGHISRDCTESGGSDRGHGGDKKCFKCNQTGHISRDCPNSDSQGPSCFNCGESGHK 203
Query: 111 AKEC 114
++EC
Sbjct: 204 SREC 207
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 22/153 (14%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC------ATESVTCYNC 62
C+ C GH C Q +D + G C+ C GH +REC A + +CYNC
Sbjct: 39 CFKCGKPGHMSRECTQGGGSD----RGGNNCFNCGKPGHISRECPDGAAGAGNTGSCYNC 94
Query: 63 SGQGHVAKDCTVKSS--------IICYNCNSSGHFARNCP-NDSSKRCYACHQAGHMAKE 113
GH++++C KS C+NC +GH +R+C SS C+ C + GH++++
Sbjct: 95 GNTGHISRECPNKSERNDRSGGDRACFNCGKTGHMSRDCTQGGSSAGCFKCGKTGHISRD 154
Query: 114 CPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C T + C+ C GH+S DC
Sbjct: 155 C---TESGGSDRGHGGDKKCFKCNQTGHISRDC 184
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA---TESVTCYN 61
S+ C+ C GH C + +D RG C+KCN GH +R+C ++ +C+N
Sbjct: 138 SSAGCFKCGKTGHISRDCTESGGSD-RGHGGDKKCFKCNQTGHISRDCPNSDSQGPSCFN 196
Query: 62 CSGQGHVAKDCT 73
C GH +++CT
Sbjct: 197 CGESGHKSRECT 208
>gi|158257670|dbj|BAF84808.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 12/123 (9%)
Query: 38 VCYKCNNYGHFARECATES--VTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARN 92
+CY+C GH A++C + CYNC GH+AKDC + CYNC GH AR+
Sbjct: 53 ICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARD 112
Query: 93 CPNDSSKRCYACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYD 145
C + ++CY+C + GH+ K+C G+T + + CY CG GHL+ +
Sbjct: 113 CDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARE 172
Query: 146 CKL 148
C +
Sbjct: 173 CTI 175
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 59/143 (41%), Gaps = 43/143 (30%)
Query: 40 YKCNNYGHFARECATESV----------------------------TCYNCSGQGHVAKD 71
+KC GH+AREC T CY C GH+AKD
Sbjct: 7 FKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAKD 66
Query: 72 CTVKSSI-ICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVV 127
C ++ + CYNC GH A++C +R CY C + GH+A++C K
Sbjct: 67 CDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK------ 120
Query: 128 DMSLTCYVCGHQGHLSYDCKLVQ 150
CY CG GH+ DC V+
Sbjct: 121 -----CYSCGEFGHIQKDCTKVK 138
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 120 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 167
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 168 HLARECTIEAT 178
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 9/54 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT 58
+ ++CY C + GH +C + S + CY+C GH AREC E+
Sbjct: 135 TKVKCYRCGETGHVAINCSKTSE---------VNCYRCGESGHLARECTIEATA 179
>gi|242032467|ref|XP_002463628.1| hypothetical protein SORBIDRAFT_01g003240 [Sorghum bicolor]
gi|241917482|gb|EER90626.1| hypothetical protein SORBIDRAFT_01g003240 [Sorghum bicolor]
Length = 258
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CY 60
TS C+NC + GH C ++ +C+ CN GH AR+C T C
Sbjct: 96 TSQTICWNCKESGHIASECKNEA-----------LCHTCNKTGHLARDCPTSGANVKLCN 144
Query: 61 NCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAG 120
C GH A DCT + + C NC GH AR C ND C C+ +GH+A+ CP T
Sbjct: 145 KCFKPGHFAVDCTNERA--CNNCRQPGHIARECKNDPV--CNLCNVSGHVARVCPKTTLA 200
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ + C +CG GH+S +C
Sbjct: 201 SEIQGGPFRDILCRICGQPGHISRNC 226
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 29/143 (20%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
+ C NC GH+ CP + C CN GHFA EC ++++ C+NC G
Sbjct: 61 LVCKNCRRPGHFAKECPSAPT-----------CNNCNLPGHFAAECTSQTI-CWNCKESG 108
Query: 67 HVAKDCTVKSSIICYNCNSSGHFARNCPNDSS--KRCYACHQAGHMAKECPGQTAGKSPE 124
H+A +C K+ +C+ CN +GH AR+CP + K C C + GH A +C + A
Sbjct: 109 HIASEC--KNEALCHTCNKTGHLARDCPTSGANVKLCNKCFKPGHFAVDCTNERA----- 161
Query: 125 PVVDMSLTCYVCGHQGHLSYDCK 147
C C GH++ +CK
Sbjct: 162 --------CNNCRQPGHIARECK 176
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 58/137 (42%), Gaps = 40/137 (29%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+ C GH CP S A+ + +C KC GHFA +C E C NC GH+
Sbjct: 120 CHTCNKTGHLARDCPT-SGANVK------LCNKCFKPGHFAVDCTNERA-CNNCRQPGHI 171
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDS------------------------SKRCYA- 103
A++C K+ +C CN SGH AR CP + S+ C A
Sbjct: 172 AREC--KNDPVCNLCNVSGHVARVCPKTTLASEIQGGPFRDILCRICGQPGHISRNCIAT 229
Query: 104 -----CHQAGHMAKECP 115
C GHM+ ECP
Sbjct: 230 IICDTCGGRGHMSYECP 246
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 22/113 (19%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSAD--------ARGDKVGIVCYKCNNYGHFARECA 53
S + C CF GH+ C + + + AR K VC CN GH AR C
Sbjct: 136 SGANVKLCNKCFKPGHFAVDCTNERACNNCRQPGHIARECKNDPVCNLCNVSGHVARVCP 195
Query: 54 TES------------VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
+ + C C GH++++C ++IIC C GH + CP
Sbjct: 196 KTTLASEIQGGPFRDILCRICGQPGHISRNCI--ATIICDTCGGRGHMSYECP 246
>gi|320591584|gb|EFX04023.1| zinc knuckle nucleic acid-binding protein [Grosmannia clavigera
kw1407]
Length = 228
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 75/181 (41%), Gaps = 48/181 (26%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---- 58
S++ CYNC GH CP + DA+ CY C GH +C T ++
Sbjct: 23 SSAERLCYNCKQPGHESNGCPLPRTTDAK------QCYHCQGLGHVQADCPTLRLSGAAT 76
Query: 59 ---CYNCSGQGHVAKDCTVKSSI------------------------------ICYNCNS 85
CY+C QGH+A+ C ++ CY C
Sbjct: 77 GGRCYSCGQQGHLARACPTPNAAGLGRGVALPPRGGFAGYGRGGFAVGGPRPATCYKCGG 136
Query: 86 SGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYD 145
HFAR+C + +CYAC + GH+++EC G P+ TCY CG GH+S D
Sbjct: 137 PNHFARDC-QAQAMKCYACGKLGHISRECTAPNGG----PLNTAGKTCYQCGEAGHISRD 191
Query: 146 C 146
C
Sbjct: 192 C 192
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 69/169 (40%), Gaps = 47/169 (27%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-------- 54
+T QCY+C GH Q CP + G G CY C GH AR C T
Sbjct: 47 TTDAKQCYHCQGLGHVQADCP---TLRLSGAATGGRCYSCGQQGHLARACPTPNAAGLGR 103
Query: 55 -----------------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFAR 91
TCY C G H A+DC ++ + CY C GH +R
Sbjct: 104 GVALPPRGGFAGYGRGGFAVGGPRPATCYKCGGPNHFARDCQAQA-MKCYACGKLGHISR 162
Query: 92 NCP-------NDSSKRCYACHQAGHMAKECP-----GQTAGKSPEPVVD 128
C N + K CY C +AGH++++CP G+ + + P P+ +
Sbjct: 163 ECTAPNGGPLNTAGKTCYQCGEAGHISRDCPQKNTNGEVSAEIPIPIPE 211
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S CY C + GH+A C + + + CY C Q GH + CP P + CY
Sbjct: 5 SRRACYKCGNVGHYAEVC-SSAERLCYNCKQPGHESNGCP--------LPRTTDAKQCYH 55
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ DC ++ S
Sbjct: 56 CQGLGHVQADCPTLRLS 72
>gi|149237715|ref|XP_001524734.1| zinc-finger protein GIS2 [Lodderomyces elongisporus NRRL YB-4239]
gi|146451331|gb|EDK45587.1| zinc-finger protein GIS2 [Lodderomyces elongisporus NRRL YB-4239]
Length = 178
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 74/149 (49%), Gaps = 26/149 (17%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCS 63
T++ QCY+C D GH Q CP ++ G CY C +GH ++ C ES +
Sbjct: 48 TNSKQCYSCGDVGHIQTECPNQAQ--------GTKCYNCGQFGHISKNCTQES------N 93
Query: 64 GQGHVAKDCT------VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
GQ H A S CY C HFAR+C + K CYAC +AGH++K+C Q
Sbjct: 94 GQTHAAPAFRKSYGRGPASGTTCYKCGGPNHFARDCQAGNVK-CYACGKAGHISKDCNSQ 152
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G +P S TCY CG GH+S +C
Sbjct: 153 --GGAPNA---GSKTCYNCGKPGHISKEC 176
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 59/124 (47%), Gaps = 13/124 (10%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCP 94
CYKC GH A +C E CYNC GH + DC +S CY+C GH CP
Sbjct: 8 TCYKCGEVGHVADDCTQEERLCYNCHKPGHESGDCPDPKQTNSKQCYSCGDVGHIQTECP 67
Query: 95 NDS-SKRCYACHQAGHMAKECPGQTAGKS-PEPVVDMS--------LTCYVCGHQGHLSY 144
N + +CY C Q GH++K C ++ G++ P S TCY CG H +
Sbjct: 68 NQAQGTKCYNCGQFGHISKNCTQESNGQTHAAPAFRKSYGRGPASGTTCYKCGGPNHFAR 127
Query: 145 DCKL 148
DC+
Sbjct: 128 DCQA 131
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 12/60 (20%)
Query: 99 KRCYACHQAGHMAKEC------------PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY C + GH+A +C PG +G P+P S CY CG GH+ +C
Sbjct: 7 RTCYKCGEVGHVADDCTQEERLCYNCHKPGHESGDCPDPKQTNSKQCYSCGDVGHIQTEC 66
>gi|427783995|gb|JAA57449.1| Putative e3 ubiquitin ligase [Rhipicephalus pulchellus]
Length = 178
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 63/137 (45%), Gaps = 27/137 (19%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDK-------------------------VGIV 38
++T +CY C GH+ C Q + G +
Sbjct: 2 SATTECYKCHKLGHFARECFQDGGSGGGGRGGMGGGGGPRGGGRGASRGRMDYKPPIREK 61
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARNCPNDS 97
CYKCN GHFAR+C CY C+G GH++KDC + CYNC GH AR C +
Sbjct: 62 CYKCNRIGHFARDCKEAEDRCYRCNGTGHISKDCQHGPDEMSCYNCGKMGHIAREC-KEQ 120
Query: 98 SKRCYACHQAGHMAKEC 114
K CY CH+ GH++++C
Sbjct: 121 EKTCYICHKQGHISRDC 137
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 68/151 (45%), Gaps = 53/151 (35%)
Query: 39 CYKCNNYGHFARECATESVT-----------------------------------CYNCS 63
CYKC+ GHFAREC + + CY C+
Sbjct: 7 CYKCHKLGHFARECFQDGGSGGGGRGGMGGGGGPRGGGRGASRGRMDYKPPIREKCYKCN 66
Query: 64 GQGHVAKDCTVKSSIICYNCNSSGHFARNC---PNDSSKRCYACHQAGHMAKECPGQTAG 120
GH A+DC ++ CY CN +GH +++C P++ S CY C + GH+A+EC Q
Sbjct: 67 RIGHFARDCK-EAEDRCYRCNGTGHISKDCQHGPDEMS--CYNCGKMGHIARECKEQEK- 122
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
TCY+C QGH+S DC+ ++
Sbjct: 123 -----------TCYICHKQGHISRDCEQDER 142
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 13/94 (13%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQ 65
+CY C GH+ C + A+ R CY+CN GH +++C + ++CYNC
Sbjct: 61 KCYKCNRIGHFARDCKE---AEDR-------CYRCNGTGHISKDCQHGPDEMSCYNCGKM 110
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK 99
GH+A++C + CY C+ GH +R+C D +
Sbjct: 111 GHIARECKEQEKT-CYICHKQGHISRDCEQDERR 143
>gi|358346811|ref|XP_003637458.1| Transcription elongation factor SPT6 [Medicago truncatula]
gi|355503393|gb|AES84596.1| Transcription elongation factor SPT6 [Medicago truncatula]
Length = 2159
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 67/163 (41%), Gaps = 30/163 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----------T 58
CY C + GH C Q+ CYKC GH AREC E T
Sbjct: 1431 CYKCGESGHMARECTQEGGGGGGRGGG-GSCYKCGESGHMARECTQEGGGGGRGGGGGGT 1489
Query: 59 CYNCSGQGHVAKDCTVKSSII--------CYNCNSSGHFARNCPNDSSKR-------CYA 103
CY C GH+A+DCT + CY C SGH AR C + CY
Sbjct: 1490 CYKCGESGHMARDCTQEGGGGGGRGGGGSCYKCGESGHMARECTQEGGGGGRGGGGTCYK 1549
Query: 104 CHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C ++GHMA+EC + G CY CG GH++ +C
Sbjct: 1550 CGESGHMARECTQEGGGGG----GRGGGACYKCGESGHMAREC 1588
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 69/164 (42%), Gaps = 31/164 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---------TC 59
CY C + GH C Q+ CYKC GH AREC E +C
Sbjct: 1402 CYKCGESGHMARECTQEGGGGGGRGGG-GSCYKCGESGHMARECTQEGGGGGGRGGGGSC 1460
Query: 60 YNCSGQGHVAKDCTVKSSI---------ICYNCNSSGHFARNCPNDSSKR--------CY 102
Y C GH+A++CT + CY C SGH AR+C + CY
Sbjct: 1461 YKCGESGHMARECTQEGGGGGRGGGGGGTCYKCGESGHMARDCTQEGGGGGGRGGGGSCY 1520
Query: 103 ACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C ++GHMA+EC + G TCY CG GH++ +C
Sbjct: 1521 KCGESGHMARECTQEGGGGG----RGGGGTCYKCGESGHMAREC 1560
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 67/164 (40%), Gaps = 30/164 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE---------SVTC 59
C+ C + GH C Q+ CYKC GH AREC E +C
Sbjct: 1373 CHKCGESGHMARECTQEGGGGGGRGGG-GSCYKCGESGHMARECTQEGGGGGGRGGGGSC 1431
Query: 60 YNCSGQGHVAKDCTVKSSII--------CYNCNSSGHFARNCPNDSSKR---------CY 102
Y C GH+A++CT + CY C SGH AR C + CY
Sbjct: 1432 YKCGESGHMARECTQEGGGGGGRGGGGSCYKCGESGHMARECTQEGGGGGRGGGGGGTCY 1491
Query: 103 ACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C ++GHMA++C T +CY CG GH++ +C
Sbjct: 1492 KCGESGHMARDC---TQEGGGGGGRGGGGSCYKCGESGHMAREC 1532
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 57/150 (38%), Gaps = 42/150 (28%)
Query: 39 CYKCNNYGHFARECATE---------------SVTCYNCSGQGHVAKDCTVK-------- 75
CYKC GH AREC E CY C GH+A++CT +
Sbjct: 1930 CYKCGESGHMARECTQEGGGGRGGGGRGGGRGGGACYKCGESGHMARECTQEGGGGGGRG 1989
Query: 76 ---SSIICYNCNSSGHFARNCPNDSSKR----------------CYACHQAGHMAKECPG 116
CY C SGH AR C + CY C ++GHMA+EC
Sbjct: 1990 GGRGGGACYKCGESGHMARECTQEGGGGGGWGGGGRGGGSGGGACYKCGESGHMARECTQ 2049
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ G CY CG GH++ +C
Sbjct: 2050 EGGGGGGRGGGRGGGACYKCGESGHMAREC 2079
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 68/189 (35%), Gaps = 51/189 (26%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGI-----VCYKCNNYGHFARECATE-------- 55
CY C + GH C Q+ G G CYKC GH AREC E
Sbjct: 1930 CYKCGESGHMARECTQEGGGGRGGGGRGGGRGGGACYKCGESGHMARECTQEGGGGGGRG 1989
Query: 56 ----SVTCYNCSGQGHVAKDCTVK----------------SSIICYNCNSSGHFARNCPN 95
CY C GH+A++CT + CY C SGH AR C
Sbjct: 1990 GGRGGGACYKCGESGHMARECTQEGGGGGGWGGGGRGGGSGGGACYKCGESGHMARECTQ 2049
Query: 96 DSSKR-----------CYACHQAGHMAKECPGQ-------TAGKSPEPVVDMSLTCYVCG 137
+ CY C ++GHMA+EC + G CY CG
Sbjct: 2050 EGGGGGGRGGGRGGGACYKCGESGHMARECTQEGGGGGGGGWGGGGRGGGSGGGACYKCG 2109
Query: 138 HQGHLSYDC 146
GH++ DC
Sbjct: 2110 ESGHMARDC 2118
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 64/190 (33%), Gaps = 52/190 (27%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGI--VCYKCNNYGHFARECATESV--------- 57
CY C + GH C Q+ CYKC GH AREC E
Sbjct: 1965 CYKCGESGHMARECTQEGGGGGGRGGGRGGGACYKCGESGHMARECTQEGGGGGGWGGGG 2024
Query: 58 --------TCYNCSGQGHVAKDCTVKSSI-----------ICYNCNSSGHFARNCPNDSS 98
CY C GH+A++CT + CY C SGH AR C +
Sbjct: 2025 RGGGSGGGACYKCGESGHMARECTQEGGGGGGRGGGRGGGACYKCGESGHMARECTQEGG 2084
Query: 99 KR------------------CYACHQAGHMAKECPGQ----TAGKSPEPVVDMSLTCYVC 136
CY C ++GHMA++C + CY C
Sbjct: 2085 GGGGGGWGGGGRGGGSGGGACYKCGESGHMARDCTQEGGGGGGWGGGGRGGGSGGNCYKC 2144
Query: 137 GHQGHLSYDC 146
G GH + +C
Sbjct: 2145 GESGHFAREC 2154
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 58/163 (35%), Gaps = 52/163 (31%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGI-------VCYKCNNYGHFARECATESV---- 57
CY C + GH C Q+ G CYKC GH AREC E
Sbjct: 1997 CYKCGESGHMARECTQEGGGGGGWGGGGRGGGSGGGACYKCGESGHMARECTQEGGGGGG 2056
Query: 58 --------TCYNCSGQGHVAKDCTVKSSI------------------ICYNCNSSGHFAR 91
CY C GH+A++CT + CY C SGH AR
Sbjct: 2057 RGGGRGGGACYKCGESGHMARECTQEGGGGGGGGWGGGGRGGGSGGGACYKCGESGHMAR 2116
Query: 92 NCPNDSSK---------------RCYACHQAGHMAKECPGQTA 119
+C + CY C ++GH A+ECP TA
Sbjct: 2117 DCTQEGGGGGGWGGGGRGGGSGGNCYKCGESGHFARECPASTA 2159
>gi|310796854|gb|EFQ32315.1| zinc knuckle [Glomerella graminicola M1.001]
Length = 182
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 62/138 (44%), Gaps = 30/138 (21%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA------------ 53
T CY C GH CPQ + G CYKC GH AR C
Sbjct: 45 TKSCYRCGQAGHISRDCPQGGNVGGGGGPSSSECYKCGEVGHVARNCPKSGGGYGGGQGG 104
Query: 54 -------------TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS-- 98
TCY+C G GH+++DCT S CYNC +GHF+R+CP +SS
Sbjct: 105 YGGGYGGGGGYGGASQKTCYSCGGYGHMSRDCTNGSK--CYNCGENGHFSRDCPKESSGG 162
Query: 99 -KRCYACHQAGHMAKECP 115
K CY C Q GH+ +CP
Sbjct: 163 EKICYKCQQPGHVQSQCP 180
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 70/175 (40%), Gaps = 51/175 (29%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----------TE 55
+CYNC + GH CP+ G K CY+C GH +R+C
Sbjct: 22 AAKCYNCGNEGHMSRDCPE-------GPKDTKSCYRCGQAGHISRDCPQGGNVGGGGGPS 74
Query: 56 SVTCYNCSGQGHVAKDCT------------------------VKSSIICYNCNSSGHFAR 91
S CY C GHVA++C S CY+C GH +R
Sbjct: 75 SSECYKCGEVGHVARNCPKSGGGYGGGQGGYGGGYGGGGGYGGASQKTCYSCGGYGHMSR 134
Query: 92 NCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+C N S +CY C + GH +++CP +++G CY C GH+ C
Sbjct: 135 DCTNGS--KCYNCGENGHFSRDCPKESSGG--------EKICYKCQQPGHVQSQC 179
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 60/135 (44%), Gaps = 25/135 (18%)
Query: 37 IVCYKCNNYGHFARECATE-SVTCYNCSGQGHVAKDCT--VKSSIICYNCNSSGHFARNC 93
++ C GH AREC + CYNC +GH+++DC K + CY C +GH +R+C
Sbjct: 2 LLAAVCGAAGHQARECPNRGAAKCYNCGNEGHMSRDCPEGPKDTKSCYRCGQAGHISRDC 61
Query: 94 PN---------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSL------------- 131
P SS CY C + GH+A+ CP G
Sbjct: 62 PQGGNVGGGGGPSSSECYKCGEVGHVARNCPKSGGGYGGGQGGYGGGYGGGGGYGGASQK 121
Query: 132 TCYVCGHQGHLSYDC 146
TCY CG GH+S DC
Sbjct: 122 TCYSCGGYGHMSRDC 136
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 48/110 (43%), Gaps = 19/110 (17%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGI---------------VCYKCNNYGHFA 49
S+ +CY C + GH +CP+ G CY C YGH +
Sbjct: 74 SSSECYKCGEVGHVARNCPKSGGGYGGGQGGYGGGYGGGGGYGGASQKTCYSCGGYGHMS 133
Query: 50 RECATESVTCYNCSGQGHVAKDCTVKSS---IICYNCNSSGHFARNCPND 96
R+C T CYNC GH ++DC +SS ICY C GH CPN+
Sbjct: 134 RDC-TNGSKCYNCGENGHFSRDCPKESSGGEKICYKCQQPGHVQSQCPNN 182
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC 52
T+ +CYNC + GH+ CP++SS + +CYKC GH +C
Sbjct: 137 TNGSKCYNCGENGHFSRDCPKESSGGEK------ICYKCQQPGHVQSQC 179
>gi|195619936|gb|ACG31798.1| cellular nucleic acid-binding protein [Zea mays]
gi|414873648|tpg|DAA52205.1| TPA: cellular nucleic acid-binding protein [Zea mays]
Length = 254
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CY 60
T C+NC + GH C ++ +C+ CN GH AR+C T C
Sbjct: 94 TLQTVCWNCKESGHIASECKNEA-----------LCHACNKTGHLARDCPTSGANVKLCN 142
Query: 61 NCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAG 120
C GH+A DCT + + C NC GH AR C ND C C+ +GH+A+ CP T
Sbjct: 143 KCFKSGHIAVDCTNERA--CNNCRQPGHIARECKNDPV--CNLCNVSGHVARVCPKTTLA 198
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ + C +CG GH+S +C
Sbjct: 199 SVIQGGPFRDILCRICGQPGHISRNC 224
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 69/141 (48%), Gaps = 29/141 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NC GH+ CP +C CN GHFA EC ++V C+NC GH+
Sbjct: 61 CKNCRRPGHFAKECPSAP-----------MCNNCNLPGHFAAECTLQTV-CWNCKESGHI 108
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS--KRCYACHQAGHMAKECPGQTAGKSPEPV 126
A +C K+ +C+ CN +GH AR+CP + K C C ++GH+A +C + A
Sbjct: 109 ASEC--KNEALCHACNKTGHLARDCPTSGANVKLCNKCFKSGHIAVDCTNERA------- 159
Query: 127 VDMSLTCYVCGHQGHLSYDCK 147
C C GH++ +CK
Sbjct: 160 ------CNNCRQPGHIARECK 174
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 57/137 (41%), Gaps = 40/137 (29%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+ C GH CP S A+ + +C KC GH A +C E C NC GH+
Sbjct: 118 CHACNKTGHLARDCPT-SGANVK------LCNKCFKSGHIAVDCTNERA-CNNCRQPGHI 169
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDS------------------------SKRCYA- 103
A++C K+ +C CN SGH AR CP + S+ C A
Sbjct: 170 AREC--KNDPVCNLCNVSGHVARVCPKTTLASVIQGGPFRDILCRICGQPGHISRNCMAT 227
Query: 104 -----CHQAGHMAKECP 115
C GHM+ ECP
Sbjct: 228 IICDTCGGRGHMSYECP 244
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 22/113 (19%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSAD--------ARGDKVGIVCYKCNNYGHFARECA 53
S + C CF GH C + + + AR K VC CN GH AR C
Sbjct: 134 SGANVKLCNKCFKSGHIAVDCTNERACNNCRQPGHIARECKNDPVCNLCNVSGHVARVCP 193
Query: 54 TES------------VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
+ + C C GH++++C ++IIC C GH + CP
Sbjct: 194 KTTLASVIQGGPFRDILCRICGQPGHISRNCM--ATIICDTCGGRGHMSYECP 244
>gi|47223220|emb|CAG11355.1| unnamed protein product [Tetraodon nigroviridis]
Length = 167
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVG-----IVCYKCNNYGHFARECATE 55
M C+ C GH+ +CP S RG + + CY+C + GH ++C
Sbjct: 1 MDLGGNSDCFGCGRPGHWVKNCPTSSGLRGRGPRGRGRGKELFCYRCGDQGHMVKDCDQT 60
Query: 56 SVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAK 112
+CYNC GH+++DC + CYNC +GH AR C + + ++C+ C GH+ K
Sbjct: 61 EDSCYNCHKSGHISRDCKEPKREREQQCYNCGKAGHMARECDHANEQKCFTCGTLGHIQK 120
Query: 113 ECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
C G + + TCY CG GH++ DC +
Sbjct: 121 LCDKVKCYRCGGIGHVALQCSKASETTCYNCGKAGHVAKDCTI 163
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 60/130 (46%), Gaps = 30/130 (23%)
Query: 39 CYKCNNYGHFARECATES---------------VTCYNCSGQGHVAKDCTVKSSIICYNC 83
C+ C GH+ + C T S + CY C QGH+ KDC ++ CYNC
Sbjct: 9 CFGCGRPGHWVKNCPTSSGLRGRGPRGRGRGKELFCYRCGDQGHMVKDCD-QTEDSCYNC 67
Query: 84 NSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQG 140
+ SGH +R+C +R CY C +AGHMA+EC K C+ CG G
Sbjct: 68 HKSGHISRDCKEPKREREQQCYNCGKAGHMARECDHANEQK-----------CFTCGTLG 116
Query: 141 HLSYDCKLVQ 150
H+ C V+
Sbjct: 117 HIQKLCDKVK 126
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 11/91 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGH 67
QCYNC GH C + C+ C GH + C + V CY C G GH
Sbjct: 87 QCYNCGKAGHMARECDHANEQK---------CFTCGTLGHIQKLC--DKVKCYRCGGIGH 135
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
VA C+ S CYNC +GH A++C ++S
Sbjct: 136 VALQCSKASETTCYNCGKAGHVAKDCTIEAS 166
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 101 CYACHQAGHMAKECP---GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
C+ C + GH K CP G L CY CG QGH+ DC + S
Sbjct: 9 CFGCGRPGHWVKNCPTSSGLRGRGPRGRGRGKELFCYRCGDQGHMVKDCDQTEDS 63
>gi|50422497|ref|XP_459816.1| DEHA2E11682p [Debaryomyces hansenii CBS767]
gi|49655484|emb|CAG88055.1| DEHA2E11682p [Debaryomyces hansenii CBS767]
Length = 172
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 72/155 (46%), Gaps = 30/155 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES--VTCYNCSGQG 66
CYNC GH CP A + CY C + GH +C T+S CYNC G
Sbjct: 29 CYNCRQPGHESNDCPAPKQATQK------QCYSCGDLGHVQSDCPTQSQGAKCYNCGQFG 82
Query: 67 HVAKDCTV---------------KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMA 111
H++K+CT K + CY C H+AR+C K CYAC + GH++
Sbjct: 83 HISKNCTEAGNESAKKPASSKLQKPATTCYKCGGPNHYARDCQAGVVK-CYACGKTGHIS 141
Query: 112 KECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
K+C + G+ S TCY CG GH+S +C
Sbjct: 142 KDCNSASGGEF------TSKTCYNCGKSGHISKEC 170
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCPN 95
CYKC GH A C E CYNC GH + DC CY+C GH +CP
Sbjct: 9 CYKCGEAGHLADNCQQEQRLCYNCRQPGHESNDCPAPKQATQKQCYSCGDLGHVQSDCPT 68
Query: 96 DS-SKRCYACHQAGHMAKEC--PGQTAGKSP--EPVVDMSLTCYVCGHQGHLSYDCK 147
S +CY C Q GH++K C G + K P + + TCY CG H + DC+
Sbjct: 69 QSQGAKCYNCGQFGHISKNCTEAGNESAKKPASSKLQKPATTCYKCGGPNHYARDCQ 125
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 61/128 (47%), Gaps = 30/128 (23%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------------- 54
QCY+C D GH Q CP +S G CY C +GH ++ C
Sbjct: 52 QCYSCGDLGHVQSDCPTQSQ--------GAKCYNCGQFGHISKNCTEAGNESAKKPASSK 103
Query: 55 ---ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS-----SKRCYACHQ 106
+ TCY C G H A+DC + CY C +GH +++C + S SK CY C +
Sbjct: 104 LQKPATTCYKCGGPNHYARDCQA-GVVKCYACGKTGHISKDCNSASGGEFTSKTCYNCGK 162
Query: 107 AGHMAKEC 114
+GH++KEC
Sbjct: 163 SGHISKEC 170
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 11/103 (10%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQ------KSSADARGDKVGIVCYKCNNYGHFARECATE 55
+ + +CYNC FGH +C + K A ++ K CYKC H+AR+C
Sbjct: 68 TQSQGAKCYNCGQFGHISKNCTEAGNESAKKPASSKLQKPATTCYKCGGPNHYARDCQAG 127
Query: 56 SVTCYNCSGQGHVAKDCTVKS-----SIICYNCNSSGHFARNC 93
V CY C GH++KDC S S CYNC SGH ++ C
Sbjct: 128 VVKCYACGKTGHISKDCNSASGGEFTSKTCYNCGKSGHISKEC 170
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 14/92 (15%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP---NDSSKRCYACHQAGHMAKEC 114
+CY C GH+A +C + +CYNC GH + +CP + K+CY+C GH+ +C
Sbjct: 8 SCYKCGEAGHLADNCQ-QEQRLCYNCRQPGHESNDCPAPKQATQKQCYSCGDLGHVQSDC 66
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
P Q+ G CY CG GH+S +C
Sbjct: 67 PTQSQG----------AKCYNCGQFGHISKNC 88
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 12/60 (20%)
Query: 99 KRCYACHQAGHMAKEC------------PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY C +AGH+A C PG + P P CY CG GH+ DC
Sbjct: 7 RSCYKCGEAGHLADNCQQEQRLCYNCRQPGHESNDCPAPKQATQKQCYSCGDLGHVQSDC 66
>gi|348540579|ref|XP_003457765.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Oreochromis niloticus]
Length = 170
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 21/166 (12%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARG-----------DKVGIVCYKCNNYGHFAREC 52
S+ +C+ C GH+ +CP +G + + CY+C GH AR+C
Sbjct: 1 MSSNECFGCGHSGHWVKNCPSGGRGRGKGRGRGKGDTHHQTSMNLFCYRCGELGHVARDC 60
Query: 53 ATESVTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
CYNC + H+++DC + +CYNC +GH ARNC + ++CY+C GH
Sbjct: 61 ERTEDACYNCGREDHISRDCKEPKKEREQLCYNCGKAGHMARNCNHAHEQKCYSCGSFGH 120
Query: 110 MAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+ K C G+ + L CY G GHL+ +C +
Sbjct: 121 IQKCCEKVKCYRCGEIGHVAVHCSKASELNCYNYGKSGHLAKECTI 166
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES-VTCYNCSGQG 66
+CY+C FGH Q C + + CY+C GH A C+ S + CYN G
Sbjct: 111 KCYSCGSFGHIQKCCEK------------VKCYRCGEIGHVAVHCSKASELNCYNYGKSG 158
Query: 67 HVAKDCTVKSS 77
H+AK+CT++++
Sbjct: 159 HLAKECTIEAT 169
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 32/97 (32%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR--------------------CYACHQAGHMAKECP 115
SS C+ C SGH+ +NCP+ R CY C + GH+A++C
Sbjct: 2 SSNECFGCGHSGHWVKNCPSGGRGRGKGRGRGKGDTHHQTSMNLFCYRCGELGHVARDC- 60
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
E D CY CG + H+S DCK +K
Sbjct: 61 --------ERTED---ACYNCGREDHISRDCKEPKKE 86
>gi|444314443|ref|XP_004177879.1| hypothetical protein TBLA_0A05670 [Tetrapisispora blattae CBS 6284]
gi|387510918|emb|CCH58360.1| hypothetical protein TBLA_0A05670 [Tetrapisispora blattae CBS 6284]
Length = 173
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 36/163 (22%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSG 64
S CYNC GH Q C + +A+ + CY C GH EC + CY+C
Sbjct: 22 SEKLCYNCNQPGHLQSECTMERTAEFK------QCYACGETGHVRSECTAQ--RCYSCGE 73
Query: 65 QGHVAKDCTVKSS-------------------IICYNCNSSGHFARNCPNDSSKRCYACH 105
GH+++DC +S + CY C H AR+C SK CY+C
Sbjct: 74 TGHMSRDCPSGNSNGRRGGRFHNNRGGAGGSRVSCYKCGGPNHMARDCLQSESK-CYSCG 132
Query: 106 QAGHMAKECP--GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ GH+A++CP G + G S + V CY CG GH+S DC
Sbjct: 133 KFGHLARDCPASGMSGGASNDRV------CYACGESGHISRDC 169
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 15/120 (12%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCP 94
CY C GH A +C +E + CYNC+ GH+ +CT++ + CY C +GH C
Sbjct: 6 ACYVCGKIGHLADDCESEKL-CYNCNQPGHLQSECTMERTAEFKQCYACGETGHVRSEC- 63
Query: 95 NDSSKRCYACHQAGHMAKECP-----GQTAGK---SPEPVVDMSLTCYVCGHQGHLSYDC 146
+++RCY+C + GHM+++CP G+ G+ + ++CY CG H++ DC
Sbjct: 64 --TAQRCYSCGETGHMSRDCPSGNSNGRRGGRFHNNRGGAGGSRVSCYKCGGPNHMARDC 121
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 17/111 (15%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKV----------GIVCYKCNNYGHFARE 51
S + +CY+C + GH CP +S RG + + CYKC H AR+
Sbjct: 61 SECTAQRCYSCGETGHMSRDCPSGNSNGRRGGRFHNNRGGAGGSRVSCYKCGGPNHMARD 120
Query: 52 CATESVTCYNCSGQGHVAKDCT-------VKSSIICYNCNSSGHFARNCPN 95
C CY+C GH+A+DC + +CY C SGH +R+CP+
Sbjct: 121 CLQSESKCYSCGKFGHLARDCPASGMSGGASNDRVCYACGESGHISRDCPS 171
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 37/86 (43%), Gaps = 18/86 (20%)
Query: 74 VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP-------------GQTAG 120
+ S CY C GH A +C +S K CY C+Q GH+ EC G+T
Sbjct: 1 MNSQKACYVCGKIGHLADDC--ESEKLCYNCNQPGHLQSECTMERTAEFKQCYACGETGH 58
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDC 146
E CY CG GH+S DC
Sbjct: 59 VRSECTAQR---CYSCGETGHMSRDC 81
>gi|238504168|ref|XP_002383316.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
flavus NRRL3357]
gi|220690787|gb|EED47136.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
flavus NRRL3357]
Length = 482
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQG 66
C NC H CP SA+ G+ C +CN GHFA++C A TC NC +
Sbjct: 320 CRNCGSSEHKAAECPNPRSAE------GVECKRCNEVGHFAKDCPQAPAPRTCRNCGSED 373
Query: 67 HVAKDCTVK---SSIICYNCNSSGHFARNCP--NDSSK-RCYACHQAGHMAKECP 115
H+A+DC S++ C NC+ GHF+R+CP D SK +C C + GH K CP
Sbjct: 374 HIARDCDKPRDISTVTCRNCDEVGHFSRDCPKKKDWSKVKCNNCGEMGHTVKRCP 428
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 65/146 (44%), Gaps = 18/146 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT---ESVTCYNCSG 64
+C NC + GH C ++ R V + C C+ GH AR+C + C NC
Sbjct: 269 KCSNCGEMGHTARGCKEEHVVHER---VEVKCVNCSAVGHRARDCTEPRRDRFACRNCGS 325
Query: 65 QGHVAKDCTVKSS---IICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAG 120
H A +C S + C CN GHFA++CP + R C C H+A++C
Sbjct: 326 SEHKAAECPNPRSAEGVECKRCNEVGHFAKDCPQAPAPRTCRNCGSEDHIARDC------ 379
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDC 146
+P ++TC C GH S DC
Sbjct: 380 --DKPRDISTVTCRNCDEVGHFSRDC 403
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
Query: 59 CYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
C NC GH A++C + + C+NC G P C C+Q GH A +CP
Sbjct: 58 CRNCGSDGHFARNCPEPRKGMACFNCGEEGKAECTKPRVFKGTCRVCNQEGHPASQCP-- 115
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
+ P V C C +GH + DCK +K
Sbjct: 116 ---ERPPDV------CKNCKMEGHRTIDCKENRK 140
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 13/89 (14%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC GH+ +CP+ + G+ C+ C G EC V TC C+
Sbjct: 57 KCRNCGSDGHFARNCPEP--------RKGMACFNCGEEGKA--ECTKPRVFKGTCRVCNQ 106
Query: 65 QGHVAKDCTVKSSIICYNCNSSGHFARNC 93
+GH A C + +C NC GH +C
Sbjct: 107 EGHPASQCPERPPDVCKNCKMEGHRTIDC 135
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT 58
ST+ C NC + GH+ CP+K D + C C GH + C + V
Sbjct: 384 DISTVTCRNCDEVGHFSRDCPKKK------DWSKVKCNNCGEMGHTVKRCPSAVVN 433
>gi|116197715|ref|XP_001224669.1| hypothetical protein CHGG_07013 [Chaetomium globosum CBS 148.51]
gi|88178292|gb|EAQ85760.1| hypothetical protein CHGG_07013 [Chaetomium globosum CBS 148.51]
Length = 200
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 63/131 (48%), Gaps = 23/131 (17%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-------- 57
T CY C GH +CP G + G CYKC GH AR C+ +
Sbjct: 71 TKTCYRCGQPGHISRNCPTDGGGGHSGGQSGAECYKCGEIGHIARNCSKGNAYGGGYGGG 130
Query: 58 ----------TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS---KRCYAC 104
TCY+C G GHV++DC S CYNC SGH +R+CP +S+ K CY C
Sbjct: 131 GFGGGGYGQKTCYSCGGVGHVSRDCVNGSK--CYNCGVSGHVSRDCPKESTGGEKICYKC 188
Query: 105 HQAGHMAKECP 115
Q GH+ +CP
Sbjct: 189 QQPGHVQSQCP 199
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 71/166 (42%), Gaps = 44/166 (26%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES----------V 57
+CYNC GH CP+ G K CY+C GH +R C T+
Sbjct: 50 KCYNCGGEGHMSRDCPE-------GPKDTKTCYRCGQPGHISRNCPTDGGGGHSGGQSGA 102
Query: 58 TCYNCSGQGHVAKDCTVKSSI-----------------ICYNCNSSGHFARNCPNDSSKR 100
CY C GH+A++C+ ++ CY+C GH +R+C N S +
Sbjct: 103 ECYKCGEIGHIARNCSKGNAYGGGYGGGGFGGGGYGQKTCYSCGGVGHVSRDCVNGS--K 160
Query: 101 CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C +GH++++CP ++ G CY C GH+ C
Sbjct: 161 CYNCGVSGHVSRDCPKESTGG--------EKICYKCQQPGHVQSQC 198
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 55/118 (46%), Gaps = 18/118 (15%)
Query: 47 HFARECATE-SVTCYNCSGQGHVAKDCT--VKSSIICYNCNSSGHFARNCPNDSSK---- 99
++AR+C + CYNC G+GH+++DC K + CY C GH +RNCP D
Sbjct: 38 NWARDCPNRGAAKCYNCGGEGHMSRDCPEGPKDTKTCYRCGQPGHISRNCPTDGGGGHSG 97
Query: 100 -----RCYACHQAGHMAKECPGQTAGKSPEPVVDMSL------TCYVCGHQGHLSYDC 146
CY C + GH+A+ C A TCY CG GH+S DC
Sbjct: 98 GQSGAECYKCGEIGHIARNCSKGNAYGGGYGGGGFGGGGYGQKTCYSCGGVGHVSRDC 155
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGI--------VCYKCNNYGHFARECATESVTC 59
+CY C + GH +C + ++ G CY C GH +R+C S C
Sbjct: 103 ECYKCGEIGHIARNCSKGNAYGGGYGGGGFGGGGYGQKTCYSCGGVGHVSRDCVNGS-KC 161
Query: 60 YNCSGQGHVAKDCTVKSS---IICYNCNSSGHFARNCPN 95
YNC GHV++DC +S+ ICY C GH CPN
Sbjct: 162 YNCGVSGHVSRDCPKESTGGEKICYKCQQPGHVQSQCPN 200
>gi|357467429|ref|XP_003603999.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355493047|gb|AES74250.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|388502654|gb|AFK39393.1| unknown [Medicago truncatula]
Length = 269
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 67/117 (57%), Gaps = 11/117 (9%)
Query: 30 ARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHF 89
+RG +C C GH+AREC +V C+NC GH+A +C+ KS +C+NC SGH
Sbjct: 44 SRGFSRDNLCKNCKRPGHYARECPNVAV-CHNCGLPGHIASECSTKS--VCWNCKESGHM 100
Query: 90 ARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
A NCPN+ C+ C + GH A+EC + P D+ L C+ C QGH++ +C
Sbjct: 101 ASNCPNEGI--CHTCGKTGHRARECSAPSL-----PPGDLRL-CHNCYKQGHIAAEC 149
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 83/186 (44%), Gaps = 58/186 (31%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----- 57
ST ++ C+NC + GH +CP + +C+ C GH AREC+ S+
Sbjct: 86 STKSV-CWNCKESGHMASNCPNEG-----------ICHTCGKTGHRARECSAPSLPPGDL 133
Query: 58 -TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
C+NC QGH+A +CT + + C NC +GH AR+CPND C C+ +GH+A++CP
Sbjct: 134 RLCHNCYKQGHIAAECTNEKA--CNNCRKTGHLARDCPNDPI--CNVCNVSGHLARQCPK 189
Query: 117 ------------------------------------QTAGKSPEPVVDMSLTCYVCGHQG 140
Q G + + C+ CG +G
Sbjct: 190 SDVIGDHRGRGSFRGAGGGVAAGGGGGYRDVVCRNCQQFGHMSRDCMGPLMICHNCGGRG 249
Query: 141 HLSYDC 146
HL+Y+C
Sbjct: 250 HLAYEC 255
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 67/143 (46%), Gaps = 32/143 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NC GHY CP + VC+ C GH A EC+T+SV C+NC GH+
Sbjct: 53 CKNCKRPGHYARECPNVA-----------VCHNCGLPGHIASECSTKSV-CWNCKESGHM 100
Query: 69 AKDCTVKSSIICYNCNSSGHFARNC-----PNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
A +C + IC+ C +GH AR C P + C+ C++ GH+A EC + A
Sbjct: 101 ASNCPNEG--ICHTCGKTGHRARECSAPSLPPGDLRLCHNCYKQGHIAAECTNEKA---- 154
Query: 124 EPVVDMSLTCYVCGHQGHLSYDC 146
C C GHL+ DC
Sbjct: 155 ---------CNNCRKTGHLARDC 168
>gi|149036677|gb|EDL91295.1| cellular nucleic acid binding protein 1, isoform CRA_c [Rattus
norvegicus]
Length = 139
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 64/130 (49%), Gaps = 20/130 (15%)
Query: 39 CYKCNNYGHFARECATESV----------TCYNCSGQGHVAKDCT---VKSSIICYNCNS 85
C+KC GH+AREC T CYNC GH+AKDC + CYNC
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRACYNCGRGGHIAKDCKEPKREREQCCYNCGK 65
Query: 86 SGHFARNCPNDSSKRCYACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGH 138
GH AR+C + ++CY+C + GH+ K+C G+T + + CY CG
Sbjct: 66 PGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGE 125
Query: 139 QGHLSYDCKL 148
GHL+ +C +
Sbjct: 126 SGHLARECTI 135
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 38/80 (47%), Gaps = 17/80 (21%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR---------CYACHQAGHMAKECPGQTAGKSPEPV 126
SS C+ C SGH+AR CP + CY C + GH+AK+C EP
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRACYNCGRGGHIAKDC--------KEPK 53
Query: 127 VDMSLTCYVCGHQGHLSYDC 146
+ CY CG GHL+ DC
Sbjct: 54 REREQCCYNCGKPGHLARDC 73
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 80 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 127
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 128 HLARECTIEAT 138
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 97 SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
SS C+ C ++GH A+ECP T G + CY CG GH++ DCK ++
Sbjct: 2 SSNECFKCGRSGHWARECP--TGGGRGRGMRSRGRACYNCGRGGHIAKDCKEPKRE 55
>gi|296484090|tpg|DAA26205.1| TPA: zinc finger protein 9-like [Bos taurus]
Length = 170
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 21/166 (12%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADAR------------GDKVGIVCYKCNNYGHFARE 51
S+ +C+ C GH+ +C + A R + ++CY+C +GH+A++
Sbjct: 1 MSSKECFKCGRVGHWAPACSKGGRARGRGARGRGHGAQCSSTTLPVICYRCGKFGHYAKD 60
Query: 52 CATESVTCYNCSGQGHVAKDCTV--KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
C CYNC GH+AKDC + + + +GH AR+C ++CY+C + GH
Sbjct: 61 CDLLDDICYNCGKXGHIAKDCAEPKREESVLLHLWQTGHLARDCDRQEERKCYSCGKXGH 120
Query: 110 MAKECPGQTAGKSPEPV-VDMS------LTCYVCGHQGHLSYDCKL 148
+ + C + E V V ++ + CY CG GHL+ +C +
Sbjct: 121 IQQYCTQVKCYRCGEIVHVAINCRKMNEVNCYRCGESGHLTRECPI 166
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 48/139 (34%), Gaps = 52/139 (37%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES----- 56
S+T + CY C FGHY C D + +CY C GH A++CA
Sbjct: 41 STTLPVICYRCGKFGHYAKDC----------DLLDDICYNCGKXGHIAKDCAEPKREESV 90
Query: 57 -------------------------------------VTCYNCSGQGHVAKDCTVKSSII 79
V CY C HVA +C + +
Sbjct: 91 LLHLWQTGHLARDCDRQEERKCYSCGKXGHIQQYCTQVKCYRCGEIVHVAINCRKMNEVN 150
Query: 80 CYNCNSSGHFARNCPNDSS 98
CY C SGH R CP +++
Sbjct: 151 CYRCGESGHLTRECPIEAN 169
>gi|255648279|gb|ACU24592.1| unknown [Glycine max]
Length = 254
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 31 RGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFA 90
RG +C C GH+AREC ++ C+NC GH+A +CT KS +C+NC GH A
Sbjct: 37 RGFSRDNLCKNCKRPGHYARECPNVAI-CHNCGLPGHIASECTTKS--LCWNCKEPGHMA 93
Query: 91 RNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+CPN+ C+ C +AGH A+EC P P D+ L C C QGH++ +C
Sbjct: 94 SSCPNEGI--CHTCGKAGHRAREC-----SAPPMPPGDLRL-CNNCYKQGHIAAEC 141
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 78/179 (43%), Gaps = 51/179 (28%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT----- 58
T+ C+NC + GH SCP + +C+ C GH AREC+ +
Sbjct: 78 TTKSLCWNCKEPGHMASSCPNEG-----------ICHTCGKAGHRARECSAPPMPPGDLR 126
Query: 59 -CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG- 116
C NC QGH+A +CT + + C N +GH AR+CPND C C+ +GH+A++CP
Sbjct: 127 LCNNCYKQGHIAAECTNEKA--CNNYRKTGHLARDCPNDPI--CNLCNVSGHVARQCPKA 182
Query: 117 -----------------------------QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
Q G + + C+ CG +GHL+Y+C
Sbjct: 183 NVLGDRSGGGGGARGGGGGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYEC 241
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 25/149 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NC GHY CP + +C+ C GH A EC T+S+ C+NC GH+
Sbjct: 45 CKNCKRPGHYARECPNVA-----------ICHNCGLPGHIASECTTKSL-CWNCKEPGHM 92
Query: 69 AKDCTVKSSIICYNCNSSGHFARNC-----PNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
A C + IC+ C +GH AR C P + C C++ GH+A EC + A +
Sbjct: 93 ASSCPNEG--ICHTCGKAGHRARECSAPPMPPGDLRLCNNCYKQGHIAAECTNEKACNNY 150
Query: 124 EPVVDMSL------TCYVCGHQGHLSYDC 146
++ C +C GH++ C
Sbjct: 151 RKTGHLARDCPNDPICNLCNVSGHVARQC 179
>gi|320040571|gb|EFW22504.1| zinc knuckle protein [Coccidioides posadasii str. Silveira]
gi|392862016|gb|EAS37384.2| zinc knuckle domain-containing protein [Coccidioides immitis RS]
Length = 199
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 64/116 (55%), Gaps = 13/116 (11%)
Query: 39 CYKCNNYGHFARECATE-SVTCYNCSGQGHVAKDCTVKS-SIICYNCNSSGHFARNCPND 96
C+ C + H AR+C + SV CYNC G+GHV++DC + CY C +GH +R+CP
Sbjct: 7 CFTCGDSAHQARDCPKKGSVICYNCGGEGHVSRDCNEPAKEKSCYRCGLTGHISRDCPQA 66
Query: 97 SS------KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY C Q GH+++ECP G+S E CY CG GH+S +C
Sbjct: 67 GESGGARGQECYKCGQVGHISRECP--QGGESGEA---RGQECYKCGQVGHISRNC 117
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 61/129 (47%), Gaps = 27/129 (20%)
Query: 8 QCYNCFDFGHYQYSCPQK-SSADARGDKVGIVCYKCNNYGHFARECATES---------- 56
+CY C GH CPQ S +ARG + CYKC GH +R C S
Sbjct: 76 ECYKCGQVGHISRECPQGGESGEARGQE----CYKCGQVGHISRNCGQYSGYNGGGYNAG 131
Query: 57 --------VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND--SSKRCYACHQ 106
+TCY+C G GH A+DCT CYNC +GH +R+C + + CY C Q
Sbjct: 132 SYRYGNRPLTCYSCGGYGHRARDCT--QGQKCYNCGETGHVSRDCTTEGKGERVCYKCKQ 189
Query: 107 AGHMAKECP 115
GH+ CP
Sbjct: 190 PGHVQAACP 198
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 72/164 (43%), Gaps = 31/164 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQG 66
C+ C D H CP+K S ++CY C GH +R+C + +CY C G
Sbjct: 7 CFTCGDSAHQARDCPKKGS---------VICYNCGGEGHVSRDCNEPAKEKSCYRCGLTG 57
Query: 67 HVAKDCTVKSSI------ICYNCNSSGHFARNCPNDSS------KRCYACHQAGHMAKEC 114
H+++DC CY C GH +R CP + CY C Q GH+++ C
Sbjct: 58 HISRDCPQAGESGGARGQECYKCGQVGHISRECPQGGESGEARGQECYKCGQVGHISRNC 117
Query: 115 PGQTAGKSPEPVVDMS-------LTCYVCGHQGHLSYDCKLVQK 151
GQ +G + S LTCY CG GH + DC QK
Sbjct: 118 -GQYSGYNGGGYNAGSYRYGNRPLTCYSCGGYGHRARDCTQGQK 160
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 66/162 (40%), Gaps = 38/162 (23%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-------ATESVTCYN 61
CY C GH CPQ A G G CYKC GH +REC CY
Sbjct: 50 CYRCGLTGHISRDCPQ---AGESGGARGQECYKCGQVGHISRECPQGGESGEARGQECYK 106
Query: 62 CSGQGHVAKDCTVKSS-----------------IICYNCNSSGHFARNCPNDSSKRCYAC 104
C GH++++C S + CY+C GH AR+C ++CY C
Sbjct: 107 CGQVGHISRNCGQYSGYNGGGYNAGSYRYGNRPLTCYSCGGYGHRARDCTQ--GQKCYNC 164
Query: 105 HQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ GH++++C + G+ CY C GH+ C
Sbjct: 165 GETGHVSRDCTTEGKGE---------RVCYKCKQPGHVQAAC 197
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADA--------RGDKVGIVCYKCNNYGHFARECATESVTC 59
+CY C GH +C Q S + R + CY C YGH AR+C T+ C
Sbjct: 103 ECYKCGQVGHISRNCGQYSGYNGGGYNAGSYRYGNRPLTCYSCGGYGHRARDC-TQGQKC 161
Query: 60 YNCSGQGHVAKDCTV--KSSIICYNCNSSGHFARNCPN 95
YNC GHV++DCT K +CY C GH CPN
Sbjct: 162 YNCGETGHVSRDCTTEGKGERVCYKCKQPGHVQAACPN 199
>gi|347828477|emb|CCD44174.1| hypothetical protein [Botryotinia fuckeliana]
Length = 503
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 66/148 (44%), Gaps = 22/148 (14%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTCYNC 62
+QC+NC + GH CP R DK C C GH ++EC + E V C NC
Sbjct: 315 VQCFNCSEIGHRVRDCPI-----PREDK--FACRNCKKSGHSSKECPEPRSAEGVECKNC 367
Query: 63 SGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ GH ++DC +C NCN GH A++C N+ C C + GH KEC
Sbjct: 368 NEIGHFSRDCPTGGGGDGGLCRNCNQPGHRAKDCTNERVMICRNCDEEGHTGKEC----- 422
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
P+P + C C GH CK
Sbjct: 423 ---PKPRDYSRVQCQNCKQMGHTKVRCK 447
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT-- 58
+ C NC GH CP+ SA+ G+ C CN GHF+R+C T
Sbjct: 332 IPREDKFACRNCKKSGHSSKECPEPRSAE------GVECKNCNEIGHFSRDCPTGGGGDG 385
Query: 59 --CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND---SSKRCYACHQAGHMAKE 113
C NC+ GH AKDCT + +IC NC+ GH + CP S +C C Q GH
Sbjct: 386 GLCRNCNQPGHRAKDCTNERVMICRNCDEEGHTGKECPKPRDYSRVQCQNCKQMGHTKVR 445
Query: 114 C 114
C
Sbjct: 446 C 446
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 20/126 (15%)
Query: 33 DKVGIVCYKCNNYGHFARECATE-------SVTCYNCSGQGHVAKDCTV--KSSIICYNC 83
D+ +C +CN GH + C E V C+NCS GH +DC + + C NC
Sbjct: 284 DRGVPLCSRCNELGHTVKHCTEERVDGERVQVQCFNCSEIGHRVRDCPIPREDKFACRNC 343
Query: 84 NSSGHFARNCPNDSSK---RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQG 140
SGH ++ CP S C C++ GH +++CP C C G
Sbjct: 344 KKSGHSSKECPEPRSAEGVECKNCNEIGHFSRDCPTGGG--------GDGGLCRNCNQPG 395
Query: 141 HLSYDC 146
H + DC
Sbjct: 396 HRAKDC 401
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 39 CYKCNNYGHFARECA--TESVTCYNCSGQGHVAKDCTVKS-----SIICYNCNSSGHFAR 91
C+ C GH EC ++ +CYNC +GH +CT + + C C SGH A
Sbjct: 73 CFNCGEEGHSKAECTQPPKARSCYNCGEEGHTKAECTNPAVAREFTGTCRICEQSGHRAS 132
Query: 92 NCPNDSSKRCYACHQAGHMAKEC 114
CP+ K C C + GH EC
Sbjct: 133 GCPSAPPKLCNNCKEEGHSILEC 155
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 36/93 (38%), Gaps = 14/93 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------TCYNC 62
C+NC + GH + C Q A + CY C GH EC +V TC C
Sbjct: 73 CFNCGEEGHSKAECTQPPKARS--------CYNCGEEGHTKAECTNPAVAREFTGTCRIC 124
Query: 63 SGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
GH A C +C NC GH C N
Sbjct: 125 EQSGHRASGCPSAPPKLCNNCKEEGHSILECKN 157
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 59 CYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARNCPNDSSKR-----CYACHQAGHMAK 112
C+NC +GH +CT + CYNC GH C N + R C C Q+GH A
Sbjct: 73 CFNCGEEGHSKAECTQPPKARSCYNCGEEGHTKAECTNPAVAREFTGTCRICEQSGHRAS 132
Query: 113 ECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
CP S P + C C +GH +CK +K
Sbjct: 133 GCP------SAPPKL-----CNNCKEEGHSILECKNPRK 160
>gi|71416083|ref|XP_810085.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi strain CL Brener]
gi|51340810|gb|AAU01009.1| nucleic acid binding protein [Trypanosoma cruzi]
gi|70874566|gb|EAN88234.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi]
Length = 134
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 61/130 (46%), Gaps = 21/130 (16%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----- 57
+ + CYNC GH CP + A GD+ CY C GH +REC T
Sbjct: 7 TRGSRACYNCGQPGHLSRECPTRPPG-AMGDRA---CYNCGRMGHLSRECPTRPPGAMGD 62
Query: 58 -TCYNCSGQGHVAKDCTVKSSI--------ICYNCNSSGHFARNCPN---DSSKRCYACH 105
CYNC GH++++C + + CY+C GH AR+CPN + CY C
Sbjct: 63 RACYNCGRMGHLSRECPNRPAGGFRGVARGACYHCQQEGHLARDCPNAPPGGERACYNCG 122
Query: 106 QAGHMAKECP 115
Q GH ++ CP
Sbjct: 123 QTGHTSRACP 132
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 56/130 (43%), Gaps = 27/130 (20%)
Query: 38 VCYKCNNYGHFARECATESV------TCYNCSGQGHVAKDCTVKSS-----IICYNCNSS 86
CY C GH +REC T CYNC GH++++C + CYNC
Sbjct: 12 ACYNCGQPGHLSRECPTRPPGAMGDRACYNCGRMGHLSRECPTRPPGAMGDRACYNCGRM 71
Query: 87 GHFARNCPNDSSK--------RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGH 138
GH +R CPN + CY C Q GH+A++CP G CY CG
Sbjct: 72 GHLSRECPNRPAGGFRGVARGACYHCQQEGHLARDCPNAPPGG--------ERACYNCGQ 123
Query: 139 QGHLSYDCKL 148
GH S C +
Sbjct: 124 TGHTSRACPV 133
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSS-----IICYNCNSSGHFARNCPNDSS-----KRCYACH 105
S CYNC GH++++C + CYNC GH +R CP + CY C
Sbjct: 10 SRACYNCGQPGHLSRECPTRPPGAMGDRACYNCGRMGHLSRECPTRPPGAMGDRACYNCG 69
Query: 106 QAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ GH+++ECP + AG CY C +GHL+ DC
Sbjct: 70 RMGHLSRECPNRPAGGF---RGVARGACYHCQQEGHLARDC 107
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPNDSS-----KRCYACHQAGHMAKECPGQTAGKS 122
+A + + S CYNC GH +R CP + CY C + GH+++ECP +
Sbjct: 1 MADNAMTRGSRACYNCGQPGHLSRECPTRPPGAMGDRACYNCGRMGHLSRECPTRP---- 56
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDC 146
P CY CG GHLS +C
Sbjct: 57 --PGAMGDRACYNCGRMGHLSREC 78
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----TCYNCSG 64
CYNC GH CP + + RG G CY C GH AR+C CYNC
Sbjct: 65 CYNCGRMGHLSRECPNRPAGGFRGVARG-ACYHCQQEGHLARDCPNAPPGGERACYNCGQ 123
Query: 65 QGHVAKDCTVK 75
GH ++ C VK
Sbjct: 124 TGHTSRACPVK 134
>gi|356516892|ref|XP_003527126.1| PREDICTED: zinc finger protein GIS2-like [Glycine max]
Length = 259
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 31 RGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFA 90
RG +C C GH+AREC ++ C+NC GH+A +CT KS +C+NC GH A
Sbjct: 39 RGFSRDNLCKNCKRPGHYARECPNVAI-CHNCGLPGHIASECTTKS--LCWNCKEPGHMA 95
Query: 91 RNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+CPN+ C+ C +AGH A+EC P P D+ L C C QGH++ +C
Sbjct: 96 SSCPNEGI--CHTCGKAGHRAREC-----SAPPMPPGDLRL-CNNCYKQGHIAAEC 143
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 79/182 (43%), Gaps = 54/182 (29%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT----- 58
T+ C+NC + GH SCP + +C+ C GH AREC+ +
Sbjct: 80 TTKSLCWNCKEPGHMASSCPNEG-----------ICHTCGKAGHRARECSAPPMPPGDLR 128
Query: 59 -CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG- 116
C NC QGH+A +CT + + C NC +GH AR+CPND C C+ +GH+A++CP
Sbjct: 129 LCNNCYKQGHIAAECTNEKA--CNNCRKTGHLARDCPNDPI--CNLCNVSGHVARQCPKA 184
Query: 117 --------------------------------QTAGKSPEPVVDMSLTCYVCGHQGHLSY 144
Q G + + C+ CG +GHL+Y
Sbjct: 185 NVLGDRSGGGGGGGGARGGGGGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAY 244
Query: 145 DC 146
+C
Sbjct: 245 EC 246
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 64/143 (44%), Gaps = 32/143 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NC GHY CP + +C+ C GH A EC T+S+ C+NC GH+
Sbjct: 47 CKNCKRPGHYARECPNVA-----------ICHNCGLPGHIASECTTKSL-CWNCKEPGHM 94
Query: 69 AKDCTVKSSIICYNCNSSGHFARNC-----PNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
A C + IC+ C +GH AR C P + C C++ GH+A EC + A
Sbjct: 95 ASSCPNEG--ICHTCGKAGHRARECSAPPMPPGDLRLCNNCYKQGHIAAECTNEKA---- 148
Query: 124 EPVVDMSLTCYVCGHQGHLSYDC 146
C C GHL+ DC
Sbjct: 149 ---------CNNCRKTGHLARDC 162
>gi|356508208|ref|XP_003522851.1| PREDICTED: zinc finger protein GIS2-like [Glycine max]
Length = 254
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 31 RGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFA 90
RG +C C GH+AREC ++ C+NC GH+A +CT KS +C+NC GH A
Sbjct: 37 RGFSRDNLCKNCKRPGHYARECPNVAI-CHNCGLPGHIASECTTKS--LCWNCKEPGHMA 93
Query: 91 RNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+CPN+ C+ C +AGH A+EC P P D+ L C C QGH++ +C
Sbjct: 94 SSCPNEGI--CHTCGKAGHRAREC-----SAPPMPPGDLRL-CNNCYKQGHIAAEC 141
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 51/179 (28%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT----- 58
T+ C+NC + GH SCP + +C+ C GH AREC+ +
Sbjct: 78 TTKSLCWNCKEPGHMASSCPNEG-----------ICHTCGKAGHRARECSAPPMPPGDLR 126
Query: 59 -CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG- 116
C NC QGH+A +CT + + C NC +GH AR+CPND C C+ +GH+A++CP
Sbjct: 127 LCNNCYKQGHIAAECTNEKA--CNNCRKTGHLARDCPNDPI--CNLCNVSGHVARQCPKA 182
Query: 117 -----------------------------QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
Q G + + C+ CG +GHL+Y+C
Sbjct: 183 NVLGDRSGGGGGARGGGGGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYEC 241
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 64/143 (44%), Gaps = 32/143 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NC GHY CP + +C+ C GH A EC T+S+ C+NC GH+
Sbjct: 45 CKNCKRPGHYARECPNVA-----------ICHNCGLPGHIASECTTKSL-CWNCKEPGHM 92
Query: 69 AKDCTVKSSIICYNCNSSGHFARNC-----PNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
A C + IC+ C +GH AR C P + C C++ GH+A EC + A
Sbjct: 93 ASSCPNEG--ICHTCGKAGHRARECSAPPMPPGDLRLCNNCYKQGHIAAECTNEKA---- 146
Query: 124 EPVVDMSLTCYVCGHQGHLSYDC 146
C C GHL+ DC
Sbjct: 147 ---------CNNCRKTGHLARDC 160
>gi|146182859|ref|XP_001025435.2| Zinc knuckle family protein [Tetrahymena thermophila]
gi|146143687|gb|EAS05190.2| Zinc knuckle family protein [Tetrahymena thermophila SB210]
Length = 1748
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 32/154 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---------TC 59
C+ C GH CP + + K G C+KC GHF+++C C
Sbjct: 1478 CFKCNQEGHMSKDCP-----NQQQKKSG--CFKCGEEGHFSKDCPNPQKQQQQKPRGGAC 1530
Query: 60 YNCSGQGHVAKDC----TVKSSIICYNCNSSGHFARNCPNDSS---KRCYACHQAGHMAK 112
+ C +GH++KDC + C+ C GH +++CPN + +C+ C+Q GHM+K
Sbjct: 1531 FKCGEEGHISKDCPNPQKQQQKNTCFKCKQEGHISKDCPNSQNSGGNKCFNCNQEGHMSK 1590
Query: 113 ECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+CP + K C+ CG +GH S +C
Sbjct: 1591 DCPNPSQKKK---------GCFNCGEEGHQSREC 1615
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 11/125 (8%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-----ESVTCYNCS 63
C+ C + GH+ CP + + G C+KC GH +++C + TC+ C
Sbjct: 1501 CFKCGEEGHFSKDCPNPQKQQQQKPRGG-ACFKCGEEGHISKDCPNPQKQQQKNTCFKCK 1559
Query: 64 GQGHVAKDCTVKSSI---ICYNCNSSGHFARNCPNDSSKR--CYACHQAGHMAKECPGQT 118
+GH++KDC + C+NCN GH +++CPN S K+ C+ C + GH ++EC +
Sbjct: 1560 QEGHISKDCPNSQNSGGNKCFNCNQEGHMSKDCPNPSQKKKGCFNCGEEGHQSRECTKER 1619
Query: 119 AGKSP 123
+ P
Sbjct: 1620 KERPP 1624
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CYNCSGQ 65
C+ C GH C + +G K C+KCN GH +++C + C+ C +
Sbjct: 1451 CFKCGKVGHMAKDC---TEPQQQGRKQSGACFKCNQEGHMSKDCPNQQQKKSGCFKCGEE 1507
Query: 66 GHVAKDCTVKSSII--------CYNCNSSGHFARNCPNDSSKR----CYACHQAGHMAKE 113
GH +KDC C+ C GH +++CPN ++ C+ C Q GH++K+
Sbjct: 1508 GHFSKDCPNPQKQQQQKPRGGACFKCGEEGHISKDCPNPQKQQQKNTCFKCKQEGHISKD 1567
Query: 114 CPG-QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CP Q +G + C+ C +GH+S DC
Sbjct: 1568 CPNSQNSGGN---------KCFNCNQEGHMSKDC 1592
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 24/132 (18%)
Query: 32 GDKVGIVCYKCNNYGHFARECAT-------ESVTCYNCSGQGHVAKDCTVKSSII--CYN 82
G G C+KC GH A++C +S C+ C+ +GH++KDC + C+
Sbjct: 1444 GGNKGKGCFKCGKVGHMAKDCTEPQQQGRKQSGACFKCNQEGHMSKDCPNQQQKKSGCFK 1503
Query: 83 CNSSGHFARNCPNDSSKR--------CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
C GHF+++CPN ++ C+ C + GH++K+CP + TC+
Sbjct: 1504 CGEEGHFSKDCPNPQKQQQQKPRGGACFKCGEEGHISKDCPNPQKQQQKN-------TCF 1556
Query: 135 VCGHQGHLSYDC 146
C +GH+S DC
Sbjct: 1557 KCKQEGHISKDC 1568
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 59 CYNCSGQGHVAKDCTV------KSSIICYNCNSSGHFARNCPNDSSKR--CYACHQAGHM 110
C+ C GH+AKDCT K S C+ CN GH +++CPN K+ C+ C + GH
Sbjct: 1451 CFKCGKVGHMAKDCTEPQQQGRKQSGACFKCNQEGHMSKDCPNQQQKKSGCFKCGEEGHF 1510
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
+K+CP + C+ CG +GH+S DC QK
Sbjct: 1511 SKDCPNPQKQQQ---QKPRGGACFKCGEEGHISKDCPNPQK 1548
>gi|154301789|ref|XP_001551306.1| hypothetical protein BC1G_10046 [Botryotinia fuckeliana B05.10]
Length = 533
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 66/148 (44%), Gaps = 22/148 (14%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTCYNC 62
+QC+NC + GH CP R DK C C GH ++EC + E V C NC
Sbjct: 274 VQCFNCGEIGHRVRDCPI-----PREDK--FACRNCKKSGHSSKECPEPRSAEGVECKNC 326
Query: 63 SGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ GH ++DC +C NCN GH A++C N+ C C + GH KEC
Sbjct: 327 NEIGHFSRDCPTGGGGDGGLCRNCNQPGHRAKDCTNERVMICRNCDEEGHTGKEC----- 381
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
P+P + C C GH CK
Sbjct: 382 ---PKPRDYSRVQCQNCKQMGHTKVRCK 406
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 53/126 (42%), Gaps = 20/126 (15%)
Query: 33 DKVGIVCYKCNNYGHFARECATE-------SVTCYNCSGQGHVAKDCTV--KSSIICYNC 83
D+ +C +CN GH + C E V C+NC GH +DC + + C NC
Sbjct: 243 DRGVPLCSRCNELGHTVKHCTEERVDGERVQVQCFNCGEIGHRVRDCPIPREDKFACRNC 302
Query: 84 NSSGHFARNCPNDSSK---RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQG 140
SGH ++ CP S C C++ GH +++CP C C G
Sbjct: 303 KKSGHSSKECPEPRSAEGVECKNCNEIGHFSRDCPTGGG--------GDGGLCRNCNQPG 354
Query: 141 HLSYDC 146
H + DC
Sbjct: 355 HRAKDC 360
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-TCYN 61
S ++C NC + GH+ CP D +C CN GH A++C E V C N
Sbjct: 317 SAEGVECKNCNEIGHFSRDCPTGGGGDG------GLCRNCNQPGHRAKDCTNERVMICRN 370
Query: 62 CSGQGHVAKDCTVK---SSIICYNCNSSGHFARNC 93
C +GH K+C S + C NC GH C
Sbjct: 371 CDEEGHTGKECPKPRDYSRVQCQNCKQMGHTKVRC 405
Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Query: 58 TCYNCSGQGHVAKDCTVKS-----SIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAK 112
+CYNC +GH +CT + + C C SGH A CP+ K C C + GH
Sbjct: 53 SCYNCGEEGHTKAECTNPAVAREFTGTCRICEQSGHRASGCPSAPPKLCNNCKEEGHSIL 112
Query: 113 EC 114
EC
Sbjct: 113 EC 114
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 24/63 (38%), Gaps = 6/63 (9%)
Query: 39 CYKCNNYGHFARECATESV------TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARN 92
CY C GH EC +V TC C GH A C +C NC GH
Sbjct: 54 CYNCGEEGHTKAECTNPAVAREFTGTCRICEQSGHRASGCPSAPPKLCNNCKEEGHSILE 113
Query: 93 CPN 95
C N
Sbjct: 114 CKN 116
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 16/77 (20%)
Query: 80 CYNCNSSGHFARNCPNDSSKR-----CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
CYNC GH C N + R C C Q+GH A CP S P + C
Sbjct: 54 CYNCGEEGHTKAECTNPAVAREFTGTCRICEQSGHRASGCP------SAPPKL-----CN 102
Query: 135 VCGHQGHLSYDCKLVQK 151
C +GH +CK +K
Sbjct: 103 NCKEEGHSILECKNPRK 119
>gi|161752|gb|AAC37171.1| cnjB [Tetrahymena thermophila]
gi|737494|prf||1922371A cnjB gene
Length = 1748
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 32/154 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---------TC 59
C+ C GH CP + + K G C+KC GHF+++C C
Sbjct: 1478 CFKCNQEGHMSKDCP-----NQQQKKSG--CFKCGEEGHFSKDCPNPQKQQQQKPRGGAC 1530
Query: 60 YNCSGQGHVAKDC----TVKSSIICYNCNSSGHFARNCPNDSS---KRCYACHQAGHMAK 112
+ C +GH++KDC + C+ C GH +++CPN + +C+ C+Q GHM+K
Sbjct: 1531 FKCGEEGHISKDCPNPQKQQQKNTCFKCKQEGHISKDCPNSQNSGGNKCFNCNQEGHMSK 1590
Query: 113 ECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+CP + K C+ CG +GH S +C
Sbjct: 1591 DCPNPSQKKK---------GCFNCGEEGHQSREC 1615
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 11/125 (8%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-----ESVTCYNCS 63
C+ C + GH+ CP + + G C+KC GH +++C + TC+ C
Sbjct: 1501 CFKCGEEGHFSKDCPNPQKQQQQKPRGG-ACFKCGEEGHISKDCPNPQKQQQKNTCFKCK 1559
Query: 64 GQGHVAKDCTVKSSI---ICYNCNSSGHFARNCPNDSSKR--CYACHQAGHMAKECPGQT 118
+GH++KDC + C+NCN GH +++CPN S K+ C+ C + GH ++EC +
Sbjct: 1560 QEGHISKDCPNSQNSGGNKCFNCNQEGHMSKDCPNPSQKKKGCFNCGEEGHQSRECTKER 1619
Query: 119 AGKSP 123
+ P
Sbjct: 1620 KERPP 1624
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CYNCSGQ 65
C+ C GH C + +G K C+KCN GH +++C + C+ C +
Sbjct: 1451 CFKCGKVGHMAKDC---TEPQQQGRKQSGACFKCNQEGHMSKDCPNQQQKKSGCFKCGEE 1507
Query: 66 GHVAKDCTVKSSII--------CYNCNSSGHFARNCPNDSSKR----CYACHQAGHMAKE 113
GH +KDC C+ C GH +++CPN ++ C+ C Q GH++K+
Sbjct: 1508 GHFSKDCPNPQKQQQQKPRGGACFKCGEEGHISKDCPNPQKQQQKNTCFKCKQEGHISKD 1567
Query: 114 CPG-QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CP Q +G + C+ C +GH+S DC
Sbjct: 1568 CPNSQNSGGN---------KCFNCNQEGHMSKDC 1592
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 24/132 (18%)
Query: 32 GDKVGIVCYKCNNYGHFARECAT-------ESVTCYNCSGQGHVAKDCTVKSSII--CYN 82
G G C+KC GH A++C +S C+ C+ +GH++KDC + C+
Sbjct: 1444 GGNKGKGCFKCGKVGHMAKDCTEPQQQGRKQSGACFKCNQEGHMSKDCPNQQQKKSGCFK 1503
Query: 83 CNSSGHFARNCPNDSSKR--------CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
C GHF+++CPN ++ C+ C + GH++K+CP + TC+
Sbjct: 1504 CGEEGHFSKDCPNPQKQQQQKPRGGACFKCGEEGHISKDCPNPQKQQQKN-------TCF 1556
Query: 135 VCGHQGHLSYDC 146
C +GH+S DC
Sbjct: 1557 KCKQEGHISKDC 1568
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 59 CYNCSGQGHVAKDCTV------KSSIICYNCNSSGHFARNCPNDSSKR--CYACHQAGHM 110
C+ C GH+AKDCT K S C+ CN GH +++CPN K+ C+ C + GH
Sbjct: 1451 CFKCGKVGHMAKDCTEPQQQGRKQSGACFKCNQEGHMSKDCPNQQQKKSGCFKCGEEGHF 1510
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
+K+CP + C+ CG +GH+S DC QK
Sbjct: 1511 SKDCPNPQKQQQ---QKPRGGACFKCGEEGHISKDCPNPQK 1548
>gi|242035205|ref|XP_002464997.1| hypothetical protein SORBIDRAFT_01g030150 [Sorghum bicolor]
gi|241918851|gb|EER91995.1| hypothetical protein SORBIDRAFT_01g030150 [Sorghum bicolor]
Length = 261
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 40/163 (24%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------ESVTCYNC 62
C+NC + GH SCP + +C C GH AR+C E + C NC
Sbjct: 79 CWNCKEPGHMANSCPNEG-----------ICRNCGKSGHIARDCTAPPVPPGEVILCSNC 127
Query: 63 SGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP-----GQ 117
GH ++CT + + C NC SGH ARNC ND C C+ AGH+A+ECP G+
Sbjct: 128 YKPGHFREECTNEKA--CNNCRQSGHIARNCTNDPV--CNLCNVAGHLARECPKSDKLGE 183
Query: 118 TAGKSPEPVVDMS--------------LTCYVCGHQGHLSYDC 146
G P V + C C GH+S DC
Sbjct: 184 RGGPPPFRGVGAPFRGVGVPFRGGFSDVICRACNQIGHMSRDC 226
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
+C C GHFAR+C + +V C+ C GH+A +C+ K IC+NC GH A +CPN+
Sbjct: 40 LCNNCKRPGHFARDCPSVAV-CHTCGLPGHIAAECSSKG--ICWNCKEPGHMANSCPNEG 96
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGH 138
C C ++GH+A++C TA P V + CY GH
Sbjct: 97 I--CRNCGKSGHIARDC---TAPPVPPGEVILCSNCYKPGH 132
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 55/145 (37%), Gaps = 42/145 (28%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
+ I C NC+ GH++ C + + C C GH AR C + V C
Sbjct: 116 VPPGEVILCSNCYKPGHFREECTNEKA-----------CNNCRQSGHIARNCTNDPV-CN 163
Query: 61 NCSGQGHVAKDCTVK------------------------------SSIICYNCNSSGHFA 90
C+ GH+A++C S +IC CN GH +
Sbjct: 164 LCNVAGHLARECPKSDKLGERGGPPPFRGVGAPFRGVGVPFRGGFSDVICRACNQIGHMS 223
Query: 91 RNCPNDSSKRCYACHQAGHMAKECP 115
R+C + C+ C GHMA ECP
Sbjct: 224 RDCMAGAFMICHNCGGRGHMAYECP 248
>gi|119499962|ref|XP_001266738.1| zinc knuckle transcription factor (CnjB), putative [Neosartorya
fischeri NRRL 181]
gi|119414903|gb|EAW24841.1| zinc knuckle transcription factor (CnjB), putative [Neosartorya
fischeri NRRL 181]
Length = 491
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 65/122 (53%), Gaps = 15/122 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQG 66
C NC H CP SA+ G+ C +CN GHFA++C A TC NC +
Sbjct: 331 CRNCGSPEHKAADCPNPRSAE------GVECKRCNEMGHFAKDCPQAPAPRTCRNCGSED 384
Query: 67 HVAKDCTVK---SSIICYNCNSSGHFARNCP--NDSSK-RCYACHQAGHMAKECPGQTAG 120
H+A+DC S++ C NC GHF+R+CP D SK +C C + GH+ K CP Q A
Sbjct: 385 HMARDCDKPRDVSTVTCRNCEEVGHFSRDCPQKKDWSKVKCNNCGEMGHIIKRCP-QAAS 443
Query: 121 KS 122
+S
Sbjct: 444 ES 445
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 67/146 (45%), Gaps = 18/146 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC + GH C ++ A D+V + C CN GH AR+C V C NC
Sbjct: 280 KCSNCGEMGHTARGCKEER---ALVDRVEVKCVNCNASGHRARDCTEPRVDRFACRNCGS 336
Query: 65 QGHVAKDCTVKSS---IICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAG 120
H A DC S + C CN GHFA++CP + R C C HMA++C
Sbjct: 337 PEHKAADCPNPRSAEGVECKRCNEMGHFAKDCPQAPAPRTCRNCGSEDHMARDC------ 390
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDC 146
+P ++TC C GH S DC
Sbjct: 391 --DKPRDVSTVTCRNCEEVGHFSRDC 414
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 11/84 (13%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC H+ CP+ + G+ C+ C GH EC V C CS
Sbjct: 66 KCRNCGGDSHFARECPEP--------RKGMACFNCGEEGHSKAECTKPRVFKGPCRICSK 117
Query: 65 QGHVAKDCTVKSSIICYNCNSSGH 88
+GH A +C + +C NC S GH
Sbjct: 118 EGHPAAECPDRPPDVCKNCQSEGH 141
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 39 CYKCNNYGHFARECAT--ESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNC 93
C C HFAREC + + C+NC +GH +CT K + C C+ GH A C
Sbjct: 67 CRNCGGDSHFARECPEPRKGMACFNCGEEGHSKAECT-KPRVFKGPCRICSKEGHPAAEC 125
Query: 94 PNDSSKRCYACHQAGHMAKEC 114
P+ C C GH EC
Sbjct: 126 PDRPPDVCKNCQSEGHKTIEC 146
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 14/96 (14%)
Query: 59 CYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNC--PNDSSKRCYACHQAGHMAKECP 115
C NC G H A++C + + C+NC GH C P C C + GH A ECP
Sbjct: 67 CRNCGGDSHFARECPEPRKGMACFNCGEEGHSKAECTKPRVFKGPCRICSKEGHPAAECP 126
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
+ P V C C +GH + +C +K
Sbjct: 127 DRP------PDV-----CKNCQSEGHKTIECTENRK 151
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 10/89 (11%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC---ATESVTC 59
ST+ C NC + GH+ CPQK D + C C GH + C A+ES
Sbjct: 395 DVSTVTCRNCEEVGHFSRDCPQKK------DWSKVKCNNCGEMGHIIKRCPQAASESFGQ 448
Query: 60 YNCSGQGHVA-KDCTVKSSIICYNCNSSG 87
N Q + A D ++ N N+ G
Sbjct: 449 DNNDIQANGAGDDWNTDTAAPVSNENTDG 477
>gi|363747942|ref|XP_003644189.1| hypothetical protein Ecym_1118 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887821|gb|AET37372.1| hypothetical protein Ecym_1118 [Eremothecium cymbalariae
DBVPG#7215]
Length = 162
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 73/156 (46%), Gaps = 35/156 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH Q C SA+ + CY C GH EC + C+NC+ GH+
Sbjct: 25 CYNCNQPGHIQSECTLPRSAEHK------QCYNCGETGHVRGECNIQK--CFNCNQAGHI 76
Query: 69 AKDC----------------TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAK 112
+KDC T S + CY C H A++C D +K CY+C ++GH+++
Sbjct: 77 SKDCPEPRRSRFSTSRASFSTKSSKVSCYRCGGPNHMAKDCLQDETK-CYSCGKSGHISR 135
Query: 113 ECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+CP + K TCY C GH+S DC +
Sbjct: 136 DCPSGPSEK----------TCYNCNEPGHISRDCPV 161
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 64/126 (50%), Gaps = 31/126 (24%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-------------- 53
QCYNC + GH RG+ C+ CN GH +++C
Sbjct: 48 QCYNCGETGH------------VRGECNIQKCFNCNQAGHISKDCPEPRRSRFSTSRASF 95
Query: 54 ---TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN-DSSKRCYACHQAGH 109
+ V+CY C G H+AKDC ++ CY+C SGH +R+CP+ S K CY C++ GH
Sbjct: 96 STKSSKVSCYRCGGPNHMAKDC-LQDETKCYSCGKSGHISRDCPSGPSEKTCYNCNEPGH 154
Query: 110 MAKECP 115
++++CP
Sbjct: 155 ISRDCP 160
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 12/117 (10%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCP 94
CY C GH A C +E + CYNC+ GH+ +CT+ S CYNC +GH C
Sbjct: 5 ACYVCGKLGHLADNCDSERL-CYNCNQPGHIQSECTLPRSAEHKQCYNCGETGHVRGEC- 62
Query: 95 NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMS-----LTCYVCGHQGHLSYDC 146
+ ++C+ C+QAGH++K+CP + S ++CY CG H++ DC
Sbjct: 63 --NIQKCFNCNQAGHISKDCPEPRRSRFSTSRASFSTKSSKVSCYRCGGPNHMAKDC 117
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 65/162 (40%), Gaps = 46/162 (28%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTCY 60
S CY C GH +C + +CY CN GH EC + E CY
Sbjct: 2 SQKACYVCGKLGHLADNCDSER-----------LCYNCNQPGHIQSECTLPRSAEHKQCY 50
Query: 61 NCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR----------------CYAC 104
NC GHV +C ++ C+NCN +GH +++CP R CY C
Sbjct: 51 NCGETGHVRGECNIQK---CFNCNQAGHISKDCPEPRRSRFSTSRASFSTKSSKVSCYRC 107
Query: 105 HQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
HMAK+C + CY CG GH+S DC
Sbjct: 108 GGPNHMAKDC------------LQDETKCYSCGKSGHISRDC 137
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 44/98 (44%), Gaps = 19/98 (19%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS---KRCYACHQAGHMAKEC 114
CY C GH+A +C S +CYNCN GH C S K+CY C + GH+ EC
Sbjct: 5 ACYVCGKLGHLADNCD--SERLCYNCNQPGHIQSECTLPRSAEHKQCYNCGETGHVRGEC 62
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
Q C+ C GH+S DC ++S
Sbjct: 63 NIQK--------------CFNCNQAGHISKDCPEPRRS 86
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 12/75 (16%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT--ESVTC 59
+ +S + CY C H C Q + CY C GH +R+C + TC
Sbjct: 97 TKSSKVSCYRCGGPNHMAKDCLQDETK----------CYSCGKSGHISRDCPSGPSEKTC 146
Query: 60 YNCSGQGHVAKDCTV 74
YNC+ GH+++DC V
Sbjct: 147 YNCNEPGHISRDCPV 161
>gi|401623989|gb|EJS42066.1| gis2p [Saccharomyces arboricola H-6]
Length = 153
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 66/153 (43%), Gaps = 32/153 (20%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TESVTCY 60
S CY C GH C + +CY CN GH +C E CY
Sbjct: 2 SQKACYVCGKIGHLAEDCDSER-----------LCYNCNKPGHVQTDCTMPRTVEFKQCY 50
Query: 61 NCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND------SSKRCYACHQAGHMAKEC 114
NC GHV +CTV+ C+NCN +GH +R CP S CY C HMAK+C
Sbjct: 51 NCGETGHVRSECTVQR---CFNCNQTGHISRECPEPKKASRFSKVSCYKCGGPNHMAKDC 107
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ G + CY CG GH+S DC+
Sbjct: 108 MKEDGGNG--------MKCYTCGQAGHMSRDCQ 132
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 62/118 (52%), Gaps = 24/118 (20%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-------ESVTCY 60
QCYNC + GH + C + C+ CN GH +REC V+CY
Sbjct: 48 QCYNCGETGHVRSECTVQR------------CFNCNQTGHISRECPEPKKASRFSKVSCY 95
Query: 61 NCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
C G H+AKDC + + + CY C +GH +R+C ND K CY C++ GH++KECP
Sbjct: 96 KCGGPNHMAKDCMKEDGGNGMKCYTCGQAGHMSRDCQND--KLCYNCNETGHISKECP 151
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 30/147 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH Q C + + + CY C GH EC + C+NC+ GH+
Sbjct: 25 CYNCNKPGHVQTDCTMPRTVEFK------QCYNCGETGHVRSECTVQR--CFNCNQTGHI 76
Query: 69 AKDCTVK------SSIICYNCNSSGHFARNCPND---SSKRCYACHQAGHMAKECPGQTA 119
+++C S + CY C H A++C + + +CY C QAGHM+++C
Sbjct: 77 SRECPEPKKASRFSKVSCYKCGGPNHMAKDCMKEDGGNGMKCYTCGQAGHMSRDCQNDK- 135
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C GH+S +C
Sbjct: 136 ------------LCYNCNETGHISKEC 150
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 1 MSSTSTIQ-CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES--- 56
+ S T+Q C+NC GH CP+ A +R KV CYKC H A++C E
Sbjct: 58 VRSECTVQRCFNCNQTGHISRECPEPKKA-SRFSKVS--CYKCGGPNHMAKDCMKEDGGN 114
Query: 57 -VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
+ CY C GH+++DC ++ +CYNCN +GH ++ CP
Sbjct: 115 GMKCYTCGQAGHMSRDC--QNDKLCYNCNETGHISKECP 151
>gi|148666813|gb|EDK99229.1| cellular nucleic acid binding protein, isoform CRA_b [Mus musculus]
Length = 140
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 64/131 (48%), Gaps = 21/131 (16%)
Query: 39 CYKCNNYGHFARECATESV-----------TCYNCSGQGHVAKDCT---VKSSIICYNCN 84
C+KC GH+AREC T CYNC GH+AKDC + CYNC
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGACYNCGRGGHIAKDCKEPKREREQCCYNCG 65
Query: 85 SSGHFARNCPNDSSKRCYACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCG 137
GH AR+C + ++CY+C + GH+ K+C G+T + + CY CG
Sbjct: 66 KPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCG 125
Query: 138 HQGHLSYDCKL 148
GHL+ +C +
Sbjct: 126 ESGHLARECTI 136
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQGH 67
CYNC GH C + + CY C GH AR+C + CY+C GH
Sbjct: 37 CYNCGRGGHIAKDCKEPKREREQ------CCYNCGKPGHLARDCDHADEQKCYSCGEFGH 90
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
+ KDCT + CY C +GH A NC S CY C ++GH+A+EC
Sbjct: 91 IQKDCT---KVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 134
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 18/81 (22%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR----------CYACHQAGHMAKECPGQTAGKSPEP 125
SS C+ C SGH+AR CP + CY C + GH+AK+C EP
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGACYNCGRGGHIAKDC--------KEP 53
Query: 126 VVDMSLTCYVCGHQGHLSYDC 146
+ CY CG GHL+ DC
Sbjct: 54 KREREQCCYNCGKPGHLARDC 74
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 81 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 128
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 129 HLARECTIEAT 139
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 9/54 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT 58
+ ++CY C + GH +C + S + CY+C GH AREC E+
Sbjct: 96 TKVKCYRCGETGHVAINCSKTSE---------VNCYRCGESGHLARECTIEATA 140
>gi|223947177|gb|ACN27672.1| unknown [Zea mays]
gi|413932600|gb|AFW67151.1| hypothetical protein ZEAMMB73_637389 [Zea mays]
Length = 256
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 70/150 (46%), Gaps = 24/150 (16%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CY 60
TS C+NC + GH C ++ +C+ CN GH AR+C T C
Sbjct: 92 TSKTVCWNCKEPGHIASECKNEA-----------LCHTCNKTGHLARDCPTSGANVKLCN 140
Query: 61 NCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAG 120
C GH+A DCT + + C NC GH AR C ND C C+ +GH+A+ CP T
Sbjct: 141 KCFKSGHIAVDCTNERA--CNNCRQPGHIARECKNDPV--CNLCNVSGHVARVCPKTTLA 196
Query: 121 KSPE----PVVDMSLTCYVCGHQGHLSYDC 146
P D + C +CG GH+S +C
Sbjct: 197 SEIHIQGGPFRD--ILCRICGQPGHISRNC 224
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 29/143 (20%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
+ C NC GH+ CP + C CN GHFA EC +++V C+NC G
Sbjct: 57 LVCKNCRRPGHFAKECPSAPT-----------CNNCNLPGHFAAECTSKTV-CWNCKEPG 104
Query: 67 HVAKDCTVKSSIICYNCNSSGHFARNCPNDSS--KRCYACHQAGHMAKECPGQTAGKSPE 124
H+A +C K+ +C+ CN +GH AR+CP + K C C ++GH+A +C + A
Sbjct: 105 HIASEC--KNEALCHTCNKTGHLARDCPTSGANVKLCNKCFKSGHIAVDCTNERA----- 157
Query: 125 PVVDMSLTCYVCGHQGHLSYDCK 147
C C GH++ +CK
Sbjct: 158 --------CNNCRQPGHIARECK 172
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 57/139 (41%), Gaps = 42/139 (30%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+ C GH CP S A+ + +C KC GH A +C E C NC GH+
Sbjct: 116 CHTCNKTGHLARDCPT-SGANVK------LCNKCFKSGHIAVDCTNERA-CNNCRQPGHI 167
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDS--------------------------SKRCY 102
A++C K+ +C CN SGH AR CP + S+ C
Sbjct: 168 AREC--KNDPVCNLCNVSGHVARVCPKTTLASEIHIQGGPFRDILCRICGQPGHISRNCM 225
Query: 103 A------CHQAGHMAKECP 115
A C GHM+ ECP
Sbjct: 226 ATVICDTCGGRGHMSYECP 244
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 24/115 (20%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSAD--------ARGDKVGIVCYKCNNYGHFARECA 53
S + C CF GH C + + + AR K VC CN GH AR C
Sbjct: 132 SGANVKLCNKCFKSGHIAVDCTNERACNNCRQPGHIARECKNDPVCNLCNVSGHVARVCP 191
Query: 54 TES--------------VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
+ + C C GH++++C +++IC C GH + CP
Sbjct: 192 KTTLASEIHIQGGPFRDILCRICGQPGHISRNCM--ATVICDTCGGRGHMSYECP 244
>gi|380494230|emb|CCF33305.1| zinc knuckle [Colletotrichum higginsianum]
Length = 226
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 74/180 (41%), Gaps = 46/180 (25%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---- 58
S++ CYNC GH CP + +A+ CY C GH +C T ++
Sbjct: 23 SSAERLCYNCKQPGHESNGCPLPRTTEAK------QCYHCQGLGHVQADCPTLRLSGAGT 76
Query: 59 ---CYNCSGQGHVAKDCTVKSSI----------------------------ICYNCNSSG 87
CYNC GH+A+ C + + CY C
Sbjct: 77 SGRCYNCGQPGHLARACPSPAGVNMGRGGPVPRGAFGGYGRGGFAGGPRPATCYKCGGPN 136
Query: 88 HFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
HFAR+C + +CYAC + GH++++C G P+ TCY CG GH+S DC
Sbjct: 137 HFARDC-QAQAMKCYACGKLGHISRDCTAPNGG----PLNTAGKTCYQCGEAGHISRDCP 191
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 60/136 (44%), Gaps = 26/136 (19%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + + CY+C GH +CP
Sbjct: 8 ACYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQADCP 67
Query: 95 N------DSSKRCYACHQAGHMAKECP---GQTAGK-SPEP-------------VVDMSL 131
+S RCY C Q GH+A+ CP G G+ P P
Sbjct: 68 TLRLSGAGTSGRCYNCGQPGHLARACPSPAGVNMGRGGPVPRGAFGGYGRGGFAGGPRPA 127
Query: 132 TCYVCGHQGHLSYDCK 147
TCY CG H + DC+
Sbjct: 128 TCYKCGGPNHFARDCQ 143
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 71/165 (43%), Gaps = 42/165 (25%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES------ 56
+T QCY+C GH Q CP + G CY C GH AR C + +
Sbjct: 47 TTEAKQCYHCQGLGHVQADCP---TLRLSGAGTSGRCYNCGQPGHLARACPSPAGVNMGR 103
Query: 57 -----------------------VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
TCY C G H A+DC ++ + CY C GH +R+C
Sbjct: 104 GGPVPRGAFGGYGRGGFAGGPRPATCYKCGGPNHFARDCQAQA-MKCYACGKLGHISRDC 162
Query: 94 P-------NDSSKRCYACHQAGHMAKECPGQ-TAGKSPEPVVDMS 130
N + K CY C +AGH++++CP + T G+ P VD++
Sbjct: 163 TAPNGGPLNTAGKTCYQCGEAGHISRDCPQKATNGEIPN-EVDLT 206
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S CY C + GH+A C + + + CY C Q GH + CP P + CY
Sbjct: 5 SRRACYKCGNVGHYAEVC-SSAERLCYNCKQPGHESNGCP--------LPRTTEAKQCYH 55
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ DC ++ S
Sbjct: 56 CQGLGHVQADCPTLRLS 72
>gi|400594711|gb|EJP62544.1| cellular nucleic acid-binding protein [Beauveria bassiana ARSEF
2860]
Length = 179
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 62/124 (50%), Gaps = 24/124 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----------- 57
CY C GH CP A G+ CYKC GH AR C S
Sbjct: 61 CYKCGQPGHLSRECP-----TAGGNGQSTECYKCGEMGHIARHCTKSSYGGSYGASYNGG 115
Query: 58 ---TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS---KRCYACHQAGHMA 111
TCY+C G GH++++C + + CYNC SGH++R+CP +S+ K CY C Q+GH+
Sbjct: 116 AGKTCYSCGGYGHMSRECV--NGMRCYNCGESGHYSRDCPKESTGGEKICYKCQQSGHVQ 173
Query: 112 KECP 115
CP
Sbjct: 174 AACP 177
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 70/130 (53%), Gaps = 14/130 (10%)
Query: 26 SSADARGDKVGIVCYKCNNYGHFARECATES-VTCYNCSGQGHVAKDCT--VKSSIICYN 82
++A +RG CY C N GH AR+C ++ CYNC +GH++++C+ +K + CY
Sbjct: 9 AAAPSRG-----ACYSCGNSGHQARDCPSKGPAKCYNCGNEGHLSRECSEPMKENKSCYK 63
Query: 83 CNSSGHFARNCP----NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVD--MSLTCYVC 136
C GH +R CP N S CY C + GH+A+ C + G S + TCY C
Sbjct: 64 CGQPGHLSRECPTAGGNGQSTECYKCGEMGHIARHCTKSSYGGSYGASYNGGAGKTCYSC 123
Query: 137 GHQGHLSYDC 146
G GH+S +C
Sbjct: 124 GGYGHMSREC 133
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 73/165 (44%), Gaps = 42/165 (25%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT---ESVT 58
++ S CY+C + GH CP K A CY C N GH +REC+ E+ +
Sbjct: 10 AAPSRGACYSCGNSGHQARDCPSKGPAK---------CYNCGNEGHLSRECSEPMKENKS 60
Query: 59 CYNCSGQGHVAKDCTVKS----SIICYNCNSSGHFARNCPNDS-------------SKRC 101
CY C GH++++C S CY C GH AR+C S K C
Sbjct: 61 CYKCGQPGHLSRECPTAGGNGQSTECYKCGEMGHIARHCTKSSYGGSYGASYNGGAGKTC 120
Query: 102 YACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
Y+C GHM++EC V+ + CY CG GH S DC
Sbjct: 121 YSCGGYGHMSREC------------VN-GMRCYNCGESGHYSRDC 152
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 69/162 (42%), Gaps = 35/162 (21%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-----ESV 57
S +CYNC + GH C + K CYKC GH +REC T +S
Sbjct: 32 SKGPAKCYNCGNEGHLSRECSEPM-------KENKSCYKCGQPGHLSRECPTAGGNGQST 84
Query: 58 TCYNCSGQGHVAKDCTVKS-------------SIICYNCNSSGHFARNCPNDSSKRCYAC 104
CY C GH+A+ CT S CY+C GH +R C N RCY C
Sbjct: 85 ECYKCGEMGHIARHCTKSSYGGSYGASYNGGAGKTCYSCGGYGHMSRECVN--GMRCYNC 142
Query: 105 HQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++GH +++CP ++ G CY C GH+ C
Sbjct: 143 GESGHYSRDCPKESTGG--------EKICYKCQQSGHVQAAC 176
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARG----DKVGIVCYKCNNYGHFARECATESVTCYN 61
+ +CY C + GH C + S + G G CY C YGH +REC + CYN
Sbjct: 83 STECYKCGEMGHIARHCTKSSYGGSYGASYNGGAGKTCYSCGGYGHMSRECVN-GMRCYN 141
Query: 62 CSGQGHVAKDCTVKSS---IICYNCNSSGHFARNCPND 96
C GH ++DC +S+ ICY C SGH CPN+
Sbjct: 142 CGESGHYSRDCPKESTGGEKICYKCQQSGHVQAACPNN 179
>gi|346970998|gb|EGY14450.1| zinc finger protein GIS2 [Verticillium dahliae VdLs.17]
Length = 204
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 74/167 (44%), Gaps = 45/167 (26%)
Query: 3 STSTIQCYNCFDFGHYQYSCP--QKSSADARGDKVGIVCYKCNNYGHFARECATES---- 56
+T QCY+C GH Q CP + S A G CY C GH AR C T +
Sbjct: 28 TTEAKQCYHCQGLGHVQADCPTLRLSGAGTSGR-----CYNCGQPGHLARTCPTPAGVGL 82
Query: 57 -------------------------VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFAR 91
TCY C G H A+DC ++ + CY C GH +R
Sbjct: 83 GRGAPVPRGGYGGFARGGFAGGPRPATCYKCGGPNHFARDCQAQA-MKCYACGKLGHISR 141
Query: 92 NCP-------NDSSKRCYACHQAGHMAKECPGQTA-GKSPEPVVDMS 130
+C N + K CY C +AGH++++CP + A G+ P VVD++
Sbjct: 142 DCTAPNGGPLNTAGKTCYQCGEAGHISRDCPQKVANGEIPNDVVDLN 188
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 60/169 (35%), Gaps = 62/169 (36%)
Query: 37 IVCYKCNNYGHFARECA----TESVTCYNCSGQGHVAKDCTV------KSSIICYNCNSS 86
+ + GH + C TE+ CY+C G GHV DC +S CYNC
Sbjct: 8 LSAFATTQPGHESNGCPLPRTTEAKQCYHCQGLGHVQADCPTLRLSGAGTSGRCYNCGQP 67
Query: 87 GHFARNCPNDS------------------------------------------------S 98
GH AR CP + +
Sbjct: 68 GHLARTCPTPAGVGLGRGAPVPRGGYGGFARGGFAGGPRPATCYKCGGPNHFARDCQAQA 127
Query: 99 KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+CYAC + GH++++C G P+ TCY CG GH+S DC
Sbjct: 128 MKCYACGKLGHISRDCTAPNGG----PLNTAGKTCYQCGEAGHISRDCP 172
>gi|358388038|gb|EHK25632.1| hypothetical protein TRIVIDRAFT_167877 [Trichoderma virens Gv29-8]
Length = 178
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 17/126 (13%)
Query: 38 VCYKCNNYGHFARECATES-VTCYNCSGQGHVAKDCT--VKSSIICYNCNSSGHFARNCP 94
CY C + GH AR+C T+ CYNC G+GH+++DCT +K + CY C GH +R+CP
Sbjct: 8 ACYSCGSTGHQARDCPTKGPAKCYNCGGEGHISRDCTEPMKDNKSCYKCGQQGHISRDCP 67
Query: 95 ------NDSSKRCYACHQAGHMAKECP--------GQTAGKSPEPVVDMSLTCYVCGHQG 140
+ S CY C + GH+A+ CP G S TCY CG G
Sbjct: 68 QAGGAGSGQSTECYKCGEKGHIARSCPKSGGGFGGNSYGGNSGGYGGGAGKTCYSCGGYG 127
Query: 141 HLSYDC 146
H+S +C
Sbjct: 128 HMSREC 133
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 62/130 (47%), Gaps = 28/130 (21%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----------- 57
CY C GH CPQ A G CYKC GH AR C
Sbjct: 53 CYKCGQQGHISRDCPQAGGA---GSGQSTECYKCGEKGHIARSCPKSGGGFGGNSYGGNS 109
Query: 58 ---------TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS---KRCYACH 105
TCY+C G GH++++C + + CYNC SGH++R+CP +S+ K CY C
Sbjct: 110 GGYGGGAGKTCYSCGGYGHMSRECV--NGMKCYNCGESGHYSRDCPKESAGGEKICYKCQ 167
Query: 106 QAGHMAKECP 115
Q+GH+ +CP
Sbjct: 168 QSGHVQAQCP 177
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 69/174 (39%), Gaps = 50/174 (28%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT---ESV 57
M T CY+C GH CP K A CY C GH +R+C ++
Sbjct: 1 MDYTPRGACYSCGSTGHQARDCPTKGPAK---------CYNCGGEGHISRDCTEPMKDNK 51
Query: 58 TCYNCSGQGHVAKDCTVKS------SIICYNCNSSGHFARNCPN---------------- 95
+CY C QGH+++DC S CY C GH AR+CP
Sbjct: 52 SCYKCGQQGHISRDCPQAGGAGSGQSTECYKCGEKGHIARSCPKSGGGFGGNSYGGNSGG 111
Query: 96 ---DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ K CY+C GHM++EC + CY CG GH S DC
Sbjct: 112 YGGGAGKTCYSCGGYGHMSRECV-------------NGMKCYNCGESGHYSRDC 152
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDK----------VGIVCYKCNNYGHFAREC 52
S + +CY C + GH SCP+ G CY C YGH +REC
Sbjct: 74 SGQSTECYKCGEKGHIARSCPKSGGGFGGNSYGGNSGGYGGGAGKTCYSCGGYGHMSREC 133
Query: 53 ATESVTCYNCSGQGHVAKDCTVKSS---IICYNCNSSGHFARNCPN 95
+ CYNC GH ++DC +S+ ICY C SGH CPN
Sbjct: 134 VN-GMKCYNCGESGHYSRDCPKESAGGEKICYKCQQSGHVQAQCPN 178
>gi|242824530|ref|XP_002488277.1| zinc knuckle nucleic acid binding protein, putative [Talaromyces
stipitatus ATCC 10500]
gi|218713198|gb|EED12623.1| zinc knuckle nucleic acid binding protein, putative [Talaromyces
stipitatus ATCC 10500]
Length = 265
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 71/163 (43%), Gaps = 43/163 (26%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----- 57
+T T QCY+C GH Q CP + G G CY C GH AR C T ++
Sbjct: 46 TTETKQCYHCQGLGHVQADCP---TLRLNGGANGGRCYGCGQPGHLARNCPTPNIQTGAG 102
Query: 58 -------------------------TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARN 92
TCY C G H A+DC + ++ CY C GH +R+
Sbjct: 103 RGSGAPRGNFGGSLRGGFGGYPRAATCYKCGGPNHFARDCQAQ-AMKCYACGKLGHISRD 161
Query: 93 C--PN-----DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVD 128
C PN + K CY C QAGH++++CP T P+P D
Sbjct: 162 CTAPNGGPLSSAGKVCYKCSQAGHISRDCP--TNENKPQPSAD 202
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 61/137 (44%), Gaps = 27/137 (19%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC+ + H + C + CY+C GH +CP
Sbjct: 7 ACYKCGNIGHYAEVCSSAERLCYNCTYRCHESNACPRPRTTETKQCYHCQGLGHVQADCP 66
Query: 95 N------DSSKRCYACHQAGHMAKECPGQT----AGK-SPEPVVDM-------------S 130
+ RCY C Q GH+A+ CP AG+ S P + +
Sbjct: 67 TLRLNGGANGGRCYGCGQPGHLARNCPTPNIQTGAGRGSGAPRGNFGGSLRGGFGGYPRA 126
Query: 131 LTCYVCGHQGHLSYDCK 147
TCY CG H + DC+
Sbjct: 127 ATCYKCGGPNHFARDCQ 143
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 67/181 (37%), Gaps = 61/181 (33%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTCY 60
S CY C + GHY C SSA+ +CY C H + C TE+ CY
Sbjct: 4 SRRACYKCGNIGHYAEVC---SSAER-------LCYNCTYRCHESNACPRPRTTETKQCY 53
Query: 61 NCSGQGHVAKDCTV------KSSIICYNCNSSGHFARNCPNDS----------------- 97
+C G GHV DC + CY C GH ARNCP +
Sbjct: 54 HCQGLGHVQADCPTLRLNGGANGGRCYGCGQPGHLARNCPTPNIQTGAGRGSGAPRGNFG 113
Query: 98 ------------SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYD 145
+ CY C H A++C Q ++ CY CG GH+S D
Sbjct: 114 GSLRGGFGGYPRAATCYKCGGPNHFARDCQAQ------------AMKCYACGKLGHISRD 161
Query: 146 C 146
C
Sbjct: 162 C 162
>gi|225710484|gb|ACO11088.1| DNA-binding protein HEXBP [Caligus rogercresseyi]
Length = 397
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Query: 39 CYKCNNYGHFARECATESV---TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
C+KC GHF+REC TESV C+ C GH +++C C+NC GH +R+CP
Sbjct: 280 CFKCGKEGHFSREC-TESVGGSNCFKCGEVGHFSRECPTGGGDKCFNCKQEGHISRDCPE 338
Query: 96 DSSKRCYACHQAGHMAKECP 115
+ CY C++ GHM++ECP
Sbjct: 339 KRNVSCYNCNETGHMSRECP 358
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES-VTCYNCSGQGH 67
C+ C GH+ C + G C+KC GHF+REC T C+NC +GH
Sbjct: 280 CFKCGKEGHFSRECTESVG--------GSNCFKCGEVGHFSRECPTGGGDKCFNCKQEGH 331
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCP 94
+++DC K ++ CYNCN +GH +R CP
Sbjct: 332 ISRDCPEKRNVSCYNCNETGHMSRECP 358
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 12/89 (13%)
Query: 59 CYNCSGQGHVAKDCTVK-SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
C+ C +GH +++CT C+ C GHF+R CP +C+ C Q GH++++CP +
Sbjct: 280 CFKCGKEGHFSRECTESVGGSNCFKCGEVGHFSRECPTGGGDKCFNCKQEGHISRDCPEK 339
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+++CY C GH+S +C
Sbjct: 340 -----------RNVSCYNCNETGHMSREC 357
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 9/45 (20%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC 52
+C+NC GH CP+K + + CY CN GH +REC
Sbjct: 322 KCFNCKQEGHISRDCPEKRN---------VSCYNCNETGHMSREC 357
>gi|242247059|ref|NP_001156049.1| zinc finger protein-like [Acyrthosiphon pisum]
gi|239789225|dbj|BAH71250.1| ACYPI000340 [Acyrthosiphon pisum]
Length = 202
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 69/149 (46%), Gaps = 44/149 (29%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSS-IICYNCNSSGHFARNCPNDS 97
CYKCN GH AR+C + CY C G GH+A+DC+ +S CYNC +GH AR CP++
Sbjct: 55 CYKCNRSGHIARDCKDKD-RCYRCDGVGHIARDCSQSASEPSCYNCRKTGHLARECPDER 113
Query: 98 SKR-------------------CYACHQAGHMAKEC--------------------PGQT 118
+ R CY C++ GH +++C G
Sbjct: 114 ADRGSGGGMGGGGMGGGGSSSTCYNCNKIGHFSRDCMESRNGGSGNYSALCRNCNGSGHM 173
Query: 119 AGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
A PE +CY CG QGHLS +C+
Sbjct: 174 ARDCPEG---NKQSCYNCGEQGHLSRECR 199
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 66/149 (44%), Gaps = 39/149 (26%)
Query: 35 VGIVCYKCNNYGHFAREC----------------------------ATESVTCYNCSGQG 66
G++CY+CN GHFAR+C + CY C+ G
Sbjct: 3 AGVMCYRCNRSGHFARDCRDSGSVSSATFSRGGRGGGERGGIGGGSSDRETNCYKCNRSG 62
Query: 67 HVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK-RCYACHQAGHMAKECPGQTAGK---- 121
H+A+DC K CY C+ GH AR+C +S+ CY C + GH+A+ECP + A +
Sbjct: 63 HIARDCKDKDR--CYRCDGVGHIARDCSQSASEPSCYNCRKTGHLARECPDERADRGSGG 120
Query: 122 ----SPEPVVDMSLTCYVCGHQGHLSYDC 146
S TCY C GH S DC
Sbjct: 121 GMGGGGMGGGGSSSTCYNCNKIGHFSRDC 149
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 60/134 (44%), Gaps = 35/134 (26%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---------- 57
+CY C GH C Q +S + CY C GH AREC E
Sbjct: 73 RCYRCDGVGHIARDCSQSASEPS--------CYNCRKTGHLARECPDERADRGSGGGMGG 124
Query: 58 ----------TCYNCSGQGHVAKDCTVKS-------SIICYNCNSSGHFARNCPNDSSKR 100
TCYNC+ GH ++DC S +C NCN SGH AR+CP + +
Sbjct: 125 GGMGGGGSSSTCYNCNKIGHFSRDCMESRNGGSGNYSALCRNCNGSGHMARDCPEGNKQS 184
Query: 101 CYACHQAGHMAKEC 114
CY C + GH+++EC
Sbjct: 185 CYNCGEQGHLSREC 198
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 40/100 (40%)
Query: 74 VKSSIICYNCNSSGHFARNCPN---------------------------DSSKRCYACHQ 106
+ + ++CY CN SGHFAR+C + D CY C++
Sbjct: 1 MSAGVMCYRCNRSGHFARDCRDSGSVSSATFSRGGRGGGERGGIGGGSSDRETNCYKCNR 60
Query: 107 AGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+GH+A++C + CY C GH++ DC
Sbjct: 61 SGHIARDCKDKD-------------RCYRCDGVGHIARDC 87
>gi|121702271|ref|XP_001269400.1| zinc knuckle domain protein [Aspergillus clavatus NRRL 1]
gi|119397543|gb|EAW07974.1| zinc knuckle domain protein [Aspergillus clavatus NRRL 1]
Length = 177
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 59/126 (46%), Gaps = 21/126 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKV---GIVCYKCNNYGHFARECA------------ 53
CY C GH CPQ + D G G CYKC GH AR C+
Sbjct: 53 CYRCGVAGHISRECPQSGAGDNYGGPSTGGGQECYKCGQVGHIARNCSQGGNYGGGYGGG 112
Query: 54 --TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS--SKRCYACHQAGH 109
TCY+C G GH+A+DCT CYNC GH +R+CP ++ + CY C Q GH
Sbjct: 113 FGGRQQTCYSCGGFGHMARDCT--QGQKCYNCGEVGHVSRDCPTEAKGERVCYKCKQPGH 170
Query: 110 MAKECP 115
+ CP
Sbjct: 171 VQAACP 176
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 64/132 (48%), Gaps = 16/132 (12%)
Query: 36 GIVCYKCNNYGHFARECATESV-TCYNCSGQGHVAKDCTV-KSSIICYNCNSSGHFARNC 93
G C+ C + H AR+C + TCYNC GQGHV+++CTV CY C +GH +R C
Sbjct: 7 GRGCFNCGDASHQARDCPKKGTPTCYNCGGQGHVSRECTVAPKEKSCYRCGVAGHISREC 66
Query: 94 PNDSS------------KRCYACHQAGHMAKECP--GQTAGKSPEPVVDMSLTCYVCGHQ 139
P + + CY C Q GH+A+ C G G TCY CG
Sbjct: 67 PQSGAGDNYGGPSTGGGQECYKCGQVGHIARNCSQGGNYGGGYGGGFGGRQQTCYSCGGF 126
Query: 140 GHLSYDCKLVQK 151
GH++ DC QK
Sbjct: 127 GHMARDCTQGQK 138
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 66/171 (38%), Gaps = 49/171 (28%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQG 66
C+NC D H CP+K + CY C GH +REC A + +CY C G
Sbjct: 10 CFNCGDASHQARDCPKKGTP---------TCYNCGGQGHVSRECTVAPKEKSCYRCGVAG 60
Query: 67 HVAKDC------------TVKSSIICYNCNSSGHFARNCPNDS-------------SKRC 101
H++++C + CY C GH ARNC + C
Sbjct: 61 HISRECPQSGAGDNYGGPSTGGGQECYKCGQVGHIARNCSQGGNYGGGYGGGFGGRQQTC 120
Query: 102 YACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
Y+C GHMA++C CY CG GH+S DC K
Sbjct: 121 YSCGGFGHMARDC-------------TQGQKCYNCGEVGHVSRDCPTEAKG 158
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGI----VCYKCNNYGHFARECATESV 57
S+ +CY C GH +C Q + CY C +GH AR+C T+
Sbjct: 79 STGGGQECYKCGQVGHIARNCSQGGNYGGGYGGGFGGRQQTCYSCGGFGHMARDC-TQGQ 137
Query: 58 TCYNCSGQGHVAKDC--TVKSSIICYNCNSSGHFARNCPN 95
CYNC GHV++DC K +CY C GH CPN
Sbjct: 138 KCYNCGEVGHVSRDCPTEAKGERVCYKCKQPGHVQAACPN 177
>gi|400598844|gb|EJP66551.1| zinc knuckle protein [Beauveria bassiana ARSEF 2860]
Length = 224
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQK--SSADARGDKVGIVCYKCNNYGHFARECATESVTC 59
+ ++ +CYNC GH +CP +A RG +G Y N+G TC
Sbjct: 73 GNATSGRCYNCGQPGHLARACPNPVGPAAMGRGAPMGRGGYAGGNFGRGGFAGGPRPATC 132
Query: 60 YNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP-------NDSSKRCYACHQAGHMAK 112
Y C G H A+DC ++ + CY C GH +R+C N + K CY C +AGH+++
Sbjct: 133 YKCGGPNHFARDCQAQA-MKCYACGKLGHISRDCTAPNGGPLNTAGKTCYQCGEAGHISR 191
Query: 113 ECPGQTAGKSPEPVVDMSLT 132
+CP Q A +PE ++ +T
Sbjct: 192 DCP-QKAAVAPEINNEVDMT 210
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 59/139 (42%), Gaps = 29/139 (20%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + + CY+C GH +CP
Sbjct: 8 ACYKCGNVGHYAEVCSSSERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQADCP 67
Query: 95 ------NDSSKRCYACHQAGHMAKECP--------------------GQTAGKSPEPVVD 128
N +S RCY C Q GH+A+ CP G G+
Sbjct: 68 TLRLTGNATSGRCYNCGQPGHLARACPNPVGPAAMGRGAPMGRGGYAGGNFGRGGFAGGP 127
Query: 129 MSLTCYVCGHQGHLSYDCK 147
TCY CG H + DC+
Sbjct: 128 RPATCYKCGGPNHFARDCQ 146
>gi|395847274|ref|XP_003796305.1| PREDICTED: cellular nucleic acid-binding protein [Otolemur
garnettii]
Length = 185
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGI--------VCYKCNNYGHFARECATES 56
S+ +C+ C GH+ CP G +CY+C GH A++C +
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCDLQE 61
Query: 57 VTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKE 113
CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + GH+ K+
Sbjct: 62 DACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKD 121
Query: 114 C 114
C
Sbjct: 122 C 122
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 33/133 (24%)
Query: 39 CYKCNNYGHFARECAT------------------ESVTCYNCSGQGHVAKDCTVKSSIIC 80
C+KC GH+AREC T + CY C GH+AKDC ++ C
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCDLQEDA-C 64
Query: 81 YNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCG 137
YNC GH A++C +R CY C + GH+A++C K CY CG
Sbjct: 65 YNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK-----------CYSCG 113
Query: 138 HQGHLSYDCKLVQ 150
GH+ DC V+
Sbjct: 114 EFGHIQKDCTKVK 126
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 20/127 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT----CYNCSG 64
CY C + GH C + A CY C GH A++C CYNC
Sbjct: 44 CYRCGESGHLAKDCDLQEDA----------CYNCGRGGHIAKDCKEPKREREQCCYNCGK 93
Query: 65 QGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPE 124
GH+A+DC CY+C GH ++C + +CY H + ++ +++ +
Sbjct: 94 PGHLARDCDHADEQKCYSCGEFGHIQKDC---TKVKCYRKHDCSDLPEK---RSSAPTRR 147
Query: 125 PVVDMSL 131
PV L
Sbjct: 148 PVAAPGL 154
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 29/94 (30%)
Query: 76 SSIICYNCNSSGHFARNCPND---------------SSKR--CYACHQAGHMAKECPGQT 118
SS C+ C SGH+AR CP +S R CY C ++GH+AK+C Q
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCDLQE 61
Query: 119 AGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
CY CG GH++ DCK ++
Sbjct: 62 DA------------CYNCGRGGHIAKDCKEPKRE 83
>gi|145229969|ref|XP_001389293.1| zinc knuckle transcription factor (CnjB) [Aspergillus niger CBS
513.88]
gi|134055407|emb|CAK37116.1| unnamed protein product [Aspergillus niger]
Length = 481
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 14/126 (11%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNC 62
+ C NC H CP SA+ + C +CN GHFA++C A TC NC
Sbjct: 319 NVFACRNCGAEDHKASECPNPRSAE------NVECKRCNEMGHFAKDCPQAPPPRTCRNC 372
Query: 63 SGQGHVAKDCTVK---SSIICYNCNSSGHFARNCPND---SSKRCYACHQAGHMAKECPG 116
+ H+AKDC S++ C NC+ GHF+R+CP S +C C + GH K CP
Sbjct: 373 GSEDHIAKDCDKPRDVSTVTCRNCDEVGHFSRDCPKKRDYSRVKCNNCGEMGHTIKRCPT 432
Query: 117 QTAGKS 122
A +
Sbjct: 433 ANAAED 438
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 64/146 (43%), Gaps = 18/146 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES---VTCYNCSG 64
+C NC GH C ++ +VG+ C C+ GH AR+C C NC
Sbjct: 272 KCSNCGVLGHTARGCKEEREERE---RVGVKCVNCSADGHRARDCPEPRRNVFACRNCGA 328
Query: 65 QGHVAKDCTVKSS---IICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAG 120
+ H A +C S + C CN GHFA++CP R C C H+AK+C
Sbjct: 329 EDHKASECPNPRSAENVECKRCNEMGHFAKDCPQAPPPRTCRNCGSEDHIAKDC------ 382
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDC 146
P V ++TC C GH S DC
Sbjct: 383 DKPRDV--STVTCRNCDEVGHFSRDC 406
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC GH+ +CP+ + + C+ C GH EC V C C+
Sbjct: 58 RCRNCGSDGHFARNCPEP--------RKDMACFNCGEDGHNKSECTKPRVFKGACRICNK 109
Query: 65 QGHVAKDCTVKSSIICYNCNSSGHFARNC 93
+GH A +C K +C NC GH +C
Sbjct: 110 EGHPAAECPEKGPDVCKNCKMEGHKTMDC 138
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 36/84 (42%), Gaps = 19/84 (22%)
Query: 80 CYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKEC---------------PGQTAGKSP 123
C NC S GHFARNCP C+ C + GH EC G A + P
Sbjct: 59 CRNCGSDGHFARNCPEPRKDMACFNCGEDGHNKSECTKPRVFKGACRICNKEGHPAAECP 118
Query: 124 EPVVDMSLTCYVCGHQGHLSYDCK 147
E D+ C C +GH + DCK
Sbjct: 119 EKGPDV---CKNCKMEGHKTMDCK 139
>gi|259149113|emb|CAY82355.1| Gis2p [Saccharomyces cerevisiae EC1118]
gi|365763461|gb|EHN04989.1| Gis2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 153
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 62/118 (52%), Gaps = 24/118 (20%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-------ESVTCY 60
QCYNC + GH + C + C+ CN GH +REC V+CY
Sbjct: 48 QCYNCGEIGHVRSECTVQR------------CFNCNQTGHISRECPEPKKTSRFSKVSCY 95
Query: 61 NCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
C G H+AKDC + S + CY C +GH +R+C ND + CY C++ GH++K+CP
Sbjct: 96 KCGGPNHMAKDCMKEDGISGLKCYTCGQAGHMSRDCQND--RLCYNCNETGHISKDCP 151
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 64/149 (42%), Gaps = 32/149 (21%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TESVTCYNCSG 64
CY C GH C + +CY CN GH +C E CYNC
Sbjct: 6 CYVCGKIGHLAEDCDSER-----------LCYNCNKPGHVQTDCTMPRTVEFKQCYNCGE 54
Query: 65 QGHVAKDCTVKSSIICYNCNSSGHFARNCPND------SSKRCYACHQAGHMAKECPGQT 118
GHV +CTV+ C+NCN +GH +R CP S CY C HMAK+C +
Sbjct: 55 IGHVRSECTVQR---CFNCNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKDCMKED 111
Query: 119 AGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
L CY CG GH+S DC+
Sbjct: 112 GISG--------LKCYTCGQAGHMSRDCQ 132
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 62/113 (54%), Gaps = 14/113 (12%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCP 94
CY C GH A +C +E + CYNC+ GHV DCT+ ++ CYNC GH C
Sbjct: 5 ACYVCGKIGHLAEDCDSERL-CYNCNKPGHVQTDCTMPRTVEFKQCYNCGEIGHVRSEC- 62
Query: 95 NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMS-LTCYVCGHQGHLSYDC 146
+ +RC+ C+Q GH+++ECP P+ S ++CY CG H++ DC
Sbjct: 63 --TVQRCFNCNQTGHISRECP------EPKKTSRFSKVSCYKCGGPNHMAKDC 107
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 65/147 (44%), Gaps = 30/147 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH Q C + + + CY C GH EC + C+NC+ GH+
Sbjct: 25 CYNCNKPGHVQTDCTMPRTVEFK------QCYNCGEIGHVRSECTVQR--CFNCNQTGHI 76
Query: 69 AKDCTVK------SSIICYNCNSSGHFARNCPND---SSKRCYACHQAGHMAKECPGQTA 119
+++C S + CY C H A++C + S +CY C QAGHM+++C
Sbjct: 77 SRECPEPKKTSRFSKVSCYKCGGPNHMAKDCMKEDGISGLKCYTCGQAGHMSRDCQNDRL 136
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C GH+S DC
Sbjct: 137 -------------CYNCNETGHISKDC 150
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 1 MSSTSTIQ-CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES--- 56
+ S T+Q C+NC GH CP+ +R KV CYKC H A++C E
Sbjct: 58 VRSECTVQRCFNCNQTGHISRECPEPKKT-SRFSKVS--CYKCGGPNHMAKDCMKEDGIS 114
Query: 57 -VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
+ CY C GH+++DC ++ +CYNCN +GH +++CP
Sbjct: 115 GLKCYTCGQAGHMSRDC--QNDRLCYNCNETGHISKDCP 151
>gi|226503759|ref|NP_001149324.1| DNA-binding protein HEXBP [Zea mays]
gi|194697746|gb|ACF82957.1| unknown [Zea mays]
gi|195626396|gb|ACG35028.1| DNA-binding protein HEXBP [Zea mays]
gi|224035195|gb|ACN36673.1| unknown [Zea mays]
gi|414867604|tpg|DAA46161.1| TPA: DNA-binding protein HEXBP isoform 1 [Zea mays]
gi|414867605|tpg|DAA46162.1| TPA: DNA-binding protein HEXBP isoform 2 [Zea mays]
Length = 261
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 72/163 (44%), Gaps = 40/163 (24%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------ESVTCYNC 62
C+NC + GH SCP + +C C GH AR+C E + C NC
Sbjct: 79 CWNCKEPGHMANSCPNEG-----------ICRNCGKSGHIARDCTAPPVPPGEVILCSNC 127
Query: 63 SGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP-----GQ 117
GH ++CT + + C NC SGH ARNC ND C C+ AGH+A++CP G+
Sbjct: 128 YKPGHFREECTNEKA--CNNCRQSGHLARNCTNDPV--CNLCNVAGHLARQCPKSDTLGE 183
Query: 118 TAGKSP-----EPVVDM---------SLTCYVCGHQGHLSYDC 146
G P P D+ + C C GH S DC
Sbjct: 184 RGGPPPFRGVGAPFHDVGAPFRGGFSDVVCRACNQIGHTSRDC 226
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
+C C GHFAREC + +V C+ C GH+A +C+ K +C+NC GH A +CPN+
Sbjct: 40 LCNNCKRPGHFARECPSVAV-CHTCGLPGHIAAECSSKG--VCWNCKEPGHMANSCPNEG 96
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGH 138
C C ++GH+A++C TA P V + CY GH
Sbjct: 97 I--CRNCGKSGHIARDC---TAPPVPPGEVILCSNCYKPGH 132
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 54/145 (37%), Gaps = 42/145 (28%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
+ I C NC+ GH++ C + + C C GH AR C + V C
Sbjct: 116 VPPGEVILCSNCYKPGHFREECTNEKA-----------CNNCRQSGHLARNCTNDPV-CN 163
Query: 61 NCSGQGHVAKDCTVK------------------------------SSIICYNCNSSGHFA 90
C+ GH+A+ C S ++C CN GH +
Sbjct: 164 LCNVAGHLARQCPKSDTLGERGGPPPFRGVGAPFHDVGAPFRGGFSDVVCRACNQIGHTS 223
Query: 91 RNCPNDSSKRCYACHQAGHMAKECP 115
R+C + C+ C GHMA ECP
Sbjct: 224 RDCMAGAFMICHNCGGRGHMAYECP 248
>gi|67423413|dbj|BAD99524.1| VASA RNA helicase [Moina macrocopa]
Length = 843
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 62/123 (50%), Gaps = 14/123 (11%)
Query: 39 CYKCNNYGHFARECATESV------TCYNCSGQGHVAKDCT-----VKSSIICYNCNSSG 87
C+ C + H +REC TCYNC GH++++C S CYNC G
Sbjct: 204 CFNCGDTNHMSRECPNPKKEGNSRGTCYNCGDSGHMSRECPNPKKESSSRGTCYNCQQEG 263
Query: 88 HFARNCPN---DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSY 144
H +++CPN + S+ C C + GHMA+ECP + + + C+ CG +GH S
Sbjct: 264 HMSKDCPNPKVERSRGCRNCGEDGHMARECPSKNGDGNGGGDRGGNRACFNCGEEGHQSK 323
Query: 145 DCK 147
DC+
Sbjct: 324 DCE 326
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 73/161 (45%), Gaps = 35/161 (21%)
Query: 9 CYNCFDFGHYQYSCPQ-KSSADARGDKVGIVCYKCNNYGHFAREC------ATESVTCYN 61
C+NC D H CP K ++RG CY C + GH +REC ++ TCYN
Sbjct: 204 CFNCGDTNHMSRECPNPKKEGNSRG-----TCYNCGDSGHMSRECPNPKKESSSRGTCYN 258
Query: 62 CSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKR-----------CYACHQA 107
C +GH++KDC V+ S C NC GH AR CP+ + C+ C +
Sbjct: 259 CQQEGHMSKDCPNPKVERSRGCRNCGEDGHMARECPSKNGDGNGGGDRGGNRACFNCGEE 318
Query: 108 GHMAKEC--PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GH +K+C P + G C+ C H++ DC
Sbjct: 319 GHQSKDCEKPRTSKGGG-------GGACFRCQSTDHMAKDC 352
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 24/110 (21%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE------- 55
S+S CYNC GH CP +RG C C GH AREC ++
Sbjct: 250 SSSRGTCYNCQQEGHMSKDCPNPKVERSRG------CRNCGEDGHMARECPSKNGDGNGG 303
Query: 56 -----SVTCYNCSGQGHVAKDCTVKSSI------ICYNCNSSGHFARNCP 94
+ C+NC +GH +KDC + C+ C S+ H A++CP
Sbjct: 304 GDRGGNRACFNCGEEGHQSKDCEKPRTSKGGGGGACFRCQSTDHMAKDCP 353
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
S+ C+ C HM++ECP +P+ + TCY CG GH+S +C +K
Sbjct: 201 SRGCFNCGDTNHMSRECP------NPKKEGNSRGTCYNCGDSGHMSRECPNPKK 248
>gi|154345718|ref|XP_001568796.1| putative universal minicircle sequence binding protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134066138|emb|CAM43928.1| putative universal minicircle sequence binding protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|449310630|gb|AGE92542.1| universal minicircle sequence binding protein [Leishmania
braziliensis]
Length = 115
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 16/121 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV--TCYNC 62
S + CY C + GH SCP+ ++ + CY C GH +R+C +E +C+NC
Sbjct: 2 SALTCYKCGEAGHMSRSCPRVAATRS--------CYNCGETGHMSRDCPSERKPKSCFNC 53
Query: 63 SGQGHVAKDCTVKS-----SIICYNCNSSGHFARNCPNDSS-KRCYACHQAGHMAKECPG 116
H++++CT ++ + CYNC +GH +R+CPN+ K CY C H+++ECP
Sbjct: 54 GSTEHLSRECTNEAKAGADTRSCYNCGGTGHLSRDCPNERKPKSCYNCGSTEHLSRECPD 113
Query: 117 Q 117
+
Sbjct: 114 R 114
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 63/118 (53%), Gaps = 18/118 (15%)
Query: 37 IVCYKCNNYGHFARECATESVT--CYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNC 93
+ CYKC GH +R C + T CYNC GH+++DC + + C+NC S+ H +R C
Sbjct: 4 LTCYKCGEAGHMSRSCPRVAATRSCYNCGETGHMSRDCPSERKPKSCFNCGSTEHLSREC 63
Query: 94 PNDS-----SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
N++ ++ CY C GH++++CP + KS CY CG HLS +C
Sbjct: 64 TNEAKAGADTRSCYNCGGTGHLSRDCPNERKPKS----------CYNCGSTEHLSREC 111
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAGKS------------ 122
S++ CY C +GH +R+CP ++ R CY C + GHM+++CP + KS
Sbjct: 2 SALTCYKCGEAGHMSRSCPRVAATRSCYNCGETGHMSRDCPSERKPKSCFNCGSTEHLSR 61
Query: 123 ----PEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
+ +CY CG GHLS DC +K
Sbjct: 62 ECTNEAKAGADTRSCYNCGGTGHLSRDCPNERK 94
>gi|401843026|gb|EJT44984.1| GIS2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 153
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 14/113 (12%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCP 94
CY C GH A +C +E + CYNC+ GHV DCT+ ++ CYNC +GH C
Sbjct: 5 ACYVCGKIGHLAEDCDSERL-CYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSEC- 62
Query: 95 NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMS-LTCYVCGHQGHLSYDC 146
+ +RC+ C+Q GH++KECP P+ S ++CY CG H++ DC
Sbjct: 63 --AVQRCFNCNQTGHISKECP------EPKKATRFSKVSCYKCGGPNHMAKDC 107
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 68/150 (45%), Gaps = 30/150 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH Q C + + + CY C GH ECA + C+NC+ GH+
Sbjct: 25 CYNCNKPGHVQTDCTMPRTVEFK------QCYNCGETGHVRSECAVQR--CFNCNQTGHI 76
Query: 69 AKDC------TVKSSIICYNCNSSGHFARNCPND---SSKRCYACHQAGHMAKECPGQTA 119
+K+C T S + CY C H A++C + S +CY C QAGHM+++C
Sbjct: 77 SKECPEPKKATRFSKVSCYKCGGPNHMAKDCMKEDGASGLKCYTCGQAGHMSRDCQN--- 133
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
CY C GH+S DC V
Sbjct: 134 ----------DRLCYNCNETGHISKDCSKV 153
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 24/117 (20%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-------ESVTCY 60
QCYNC + GH + C + C+ CN GH ++EC V+CY
Sbjct: 48 QCYNCGETGHVRSECAVQR------------CFNCNQTGHISKECPEPKKATRFSKVSCY 95
Query: 61 NCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
C G H+AKDC + S + CY C +GH +R+C ND + CY C++ GH++K+C
Sbjct: 96 KCGGPNHMAKDCMKEDGASGLKCYTCGQAGHMSRDCQND--RLCYNCNETGHISKDC 150
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES----V 57
S + +C+NC GH CP+ A R KV CYKC H A++C E +
Sbjct: 60 SECAVQRCFNCNQTGHISKECPEPKKA-TRFSKVS--CYKCGGPNHMAKDCMKEDGASGL 116
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
CY C GH+++DC ++ +CYNCN +GH +++C
Sbjct: 117 KCYTCGQAGHMSRDC--QNDRLCYNCNETGHISKDC 150
>gi|50291237|ref|XP_448051.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527362|emb|CAG61002.1| unnamed protein product [Candida glabrata]
Length = 155
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 24/119 (20%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----------ATESV 57
QCYNC + GH + C + C+ CN GH +REC A+++V
Sbjct: 48 QCYNCGETGHVKSECSIQR------------CFNCNQTGHVSRECPEPRKGRFGAASKNV 95
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECP 115
+CY C G HVA+DC +++ CY+C GH +R+CPN +++ CY C++ GH++++CP
Sbjct: 96 SCYKCGGPNHVARDC-MQTDTKCYSCGRFGHVSRDCPNGPNEKVCYNCNETGHISRDCP 153
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 9/112 (8%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCP 94
CY C GH A +C +E + CYNC+ GHV +CT+ ++ CYNC +GH C
Sbjct: 5 ACYVCGKIGHLADDCDSERL-CYNCNQPGHVQSECTMPRTVEHKQCYNCGETGHVKSEC- 62
Query: 95 NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
S +RC+ C+Q GH+++ECP G+ +++CY CG H++ DC
Sbjct: 63 --SIQRCFNCNQTGHVSRECPEPRKGRF--GAASKNVSCYKCGGPNHVARDC 110
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 28/150 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH Q C + + + CY C GH EC+ + C+NC+ GHV
Sbjct: 25 CYNCNQPGHVQSECTMPRTVEHK------QCYNCGETGHVKSECSIQR--CFNCNQTGHV 76
Query: 69 AKDC---------TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+++C ++ CY C H AR+C +K CY+C + GH++++CP
Sbjct: 77 SRECPEPRKGRFGAASKNVSCYKCGGPNHVARDCMQTDTK-CYSCGRFGHVSRDCPNGPN 135
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
K CY C GH+S DC ++
Sbjct: 136 EK----------VCYNCNETGHISRDCPVL 155
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYN 61
S S +C+NC GH CP+ + CYKC H AR+C CY+
Sbjct: 60 SECSIQRCFNCNQTGHVSRECPEPRKGRFGAASKNVSCYKCGGPNHVARDCMQTDTKCYS 119
Query: 62 CSGQGHVAKDC-TVKSSIICYNCNSSGHFARNCP 94
C GHV++DC + +CYNCN +GH +R+CP
Sbjct: 120 CGRFGHVSRDCPNGPNEKVCYNCNETGHISRDCP 153
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 63/155 (40%), Gaps = 39/155 (25%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTCY 60
S CY C GH C + +CY CN GH EC E CY
Sbjct: 2 SQKACYVCGKIGHLADDCDSER-----------LCYNCNQPGHVQSECTMPRTVEHKQCY 50
Query: 61 NCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---------CYACHQAGHMA 111
NC GHV +C+++ C+NCN +GH +R CP R CY C H+A
Sbjct: 51 NCGETGHVKSECSIQR---CFNCNQTGHVSRECPEPRKGRFGAASKNVSCYKCGGPNHVA 107
Query: 112 KECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++C + CY CG GH+S DC
Sbjct: 108 RDC------------MQTDTKCYSCGRFGHVSRDC 130
>gi|413932599|gb|AFW67150.1| hypothetical protein ZEAMMB73_637389 [Zea mays]
Length = 218
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 71/148 (47%), Gaps = 26/148 (17%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
+ C NC GH+ CP + C CN GHFA EC +++V C+NC G
Sbjct: 57 LVCKNCRRPGHFAKECPSAPT-----------CNNCNLPGHFAAECTSKTV-CWNCKEPG 104
Query: 67 HVAK----DCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKS 122
H+A DCT + + C NC GH AR C ND C C+ +GH+A+ CP T
Sbjct: 105 HIASHIAVDCTNERA--CNNCRQPGHIARECKNDPV--CNLCNVSGHVARVCPKTTLASE 160
Query: 123 PE----PVVDMSLTCYVCGHQGHLSYDC 146
P D + C +CG GH+S +C
Sbjct: 161 IHIQGGPFRD--ILCRICGQPGHISRNC 186
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 56/125 (44%), Gaps = 23/125 (18%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCS 63
TS C+NC + GH + D ++ C C GH AREC + V C C+
Sbjct: 92 TSKTVCWNCKEPGHIA----SHIAVDCTNERA---CNNCRQPGHIARECKNDPV-CNLCN 143
Query: 64 GQGHVAKDC---TVKSSI----------ICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
GHVA+ C T+ S I +C C GH +RNC ++ C C GHM
Sbjct: 144 VSGHVARVCPKTTLASEIHIQGGPFRDILCRICGQPGHISRNC--MATVICDTCGGRGHM 201
Query: 111 AKECP 115
+ ECP
Sbjct: 202 SYECP 206
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
Query: 78 IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA-GKSPEP-------VVDM 129
++C NC GHFA+ CP S+ C C+ GH A EC +T EP VD
Sbjct: 57 LVCKNCRRPGHFAKECP--SAPTCNNCNLPGHFAAECTSKTVCWNCKEPGHIASHIAVDC 114
Query: 130 S--LTCYVCGHQGHLSYDCK 147
+ C C GH++ +CK
Sbjct: 115 TNERACNNCRQPGHIARECK 134
>gi|319921905|gb|ADV78571.1| universal minicircle sequence-binding protein 1 [Leishmania
donovani]
Length = 115
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 16/121 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV--TCYNC 62
S + CY C + GH SCP+ ++ + CY C H +R+C +E +CYNC
Sbjct: 2 SAVTCYKCGEAGHMSRSCPRAAATRS--------CYNCGETSHMSRDCPSERKPKSCYNC 53
Query: 63 SGQGHVAKDCTVKS-----SIICYNCNSSGHFARNCPNDSS-KRCYACHQAGHMAKECPG 116
H++++CT ++ + CYNC +GH +R+CPN+ K CY C H+++ECP
Sbjct: 54 GSTDHLSRECTNEAKAGADTRSCYNCGGTGHLSRDCPNERKPKSCYNCGSTDHLSRECPD 113
Query: 117 Q 117
+
Sbjct: 114 R 114
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 18/119 (15%)
Query: 36 GIVCYKCNNYGHFARECATESVT--CYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARN 92
+ CYKC GH +R C + T CYNC H+++DC + + CYNC S+ H +R
Sbjct: 3 AVTCYKCGEAGHMSRSCPRAAATRSCYNCGETSHMSRDCPSERKPKSCYNCGSTDHLSRE 62
Query: 93 CPNDS-----SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C N++ ++ CY C GH++++CP + KS CY CG HLS +C
Sbjct: 63 CTNEAKAGADTRSCYNCGGTGHLSRDCPNERKPKS----------CYNCGSTDHLSREC 111
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 15/100 (15%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE------S 56
+ +T CYNC + H CP ++ CY C + H +REC E +
Sbjct: 22 AAATRSCYNCGETSHMSRDCPS--------ERKPKSCYNCGSTDHLSRECTNEAKAGADT 73
Query: 57 VTCYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNCPN 95
+CYNC G GH+++DC + CYNC S+ H +R CP+
Sbjct: 74 RSCYNCGGTGHLSRDCPNERKPKSCYNCGSTDHLSRECPD 113
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 11/78 (14%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
S++ CY C +GH +R+CP ++ R CY C + HM+++CP + KS CY
Sbjct: 2 SAVTCYKCGEAGHMSRSCPRAAATRSCYNCGETSHMSRDCPSERKPKS----------CY 51
Query: 135 VCGHQGHLSYDCKLVQKS 152
CG HLS +C K+
Sbjct: 52 NCGSTDHLSRECTNEAKA 69
>gi|52345636|ref|NP_001004865.1| zinc finger protein 9 [Xenopus (Silurana) tropicalis]
gi|49257796|gb|AAH74704.1| CCHC-type zinc finger, nucleic acid binding protein [Xenopus
(Silurana) tropicalis]
Length = 138
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 21/131 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR------------------GDKVGIVCYKCNNYG 46
S+ +C+ C GH+ CP + +CY+C G
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGRGRGRGGFSSSRGFQFISSSLPDICYRCGESG 61
Query: 47 HFARECATESVTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYA 103
H A++C + CYNC GH+AKDC + CYNC GH AR+C + ++CY+
Sbjct: 62 HLAKDCDLQEDACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDCDHADEQKCYS 121
Query: 104 CHQAGHMAKEC 114
C + GH+A+EC
Sbjct: 122 CGEFGHLAREC 132
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 56/115 (48%), Gaps = 16/115 (13%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT-----VKSSI--ICYNCNSSGHFAR 91
C+KC GH+AREC T G+G + + SS+ ICY C SGH A+
Sbjct: 6 CFKCGRTGHWARECPTGGGRGRGGRGRGRGGFSSSRGFQFISSSLPDICYRCGESGHLAK 65
Query: 92 NCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+C + CY C + GH+AK+C EP + CY CG GHL+ DC
Sbjct: 66 DC-DLQEDACYNCGRGGHIAKDCK--------EPRKEREQCCYNCGKPGHLARDC 111
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQGH 67
CYNC GH C + + CY C GH AR+C + CY+C GH
Sbjct: 74 CYNCGRGGHIAKDCKEPRKEREQ------CCYNCGKPGHLARDCDHADEQKCYSCGEFGH 127
Query: 68 VAKDCTVKSS 77
+A++CT++++
Sbjct: 128 LARECTIEAT 137
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 40/104 (38%), Gaps = 39/104 (37%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR---------------------------CYACHQAG 108
SS C+ C +GH+AR CP + CY C ++G
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGRGRGRGGFSSSRGFQFISSSLPDICYRCGESG 61
Query: 109 HMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
H+AK+C Q CY CG GH++ DCK +K
Sbjct: 62 HLAKDCDLQED------------ACYNCGRGGHIAKDCKEPRKE 93
>gi|326533496|dbj|BAK05279.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1027
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 23/127 (18%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
+C+KCN GHF+REC + T Y A +S +C+ CN GHF+R+CP +
Sbjct: 878 LCFKCNQPGHFSRECPQQEATSYRSPAANANA------NSGLCFKCNQPGHFSRDCPGQA 931
Query: 98 SKR--------------CYACHQAGHMAKECPGQTA---GKSPEPVVDMSLTCYVCGHQG 140
+ CY C+Q GH A++CPGQ A G S + CY C G
Sbjct: 932 ANSYGASAGVNAGAAGLCYKCNQTGHFARDCPGQAANSYGASAGANSGTAGLCYKCNQPG 991
Query: 141 HLSYDCK 147
H + DC+
Sbjct: 992 HFARDCQ 998
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 25/130 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGI-----VCYKCNNYGHFARECATESVTCYNCS 63
C+ C GH+ CPQ+ + R +C+KCN GHF+R+C ++ Y S
Sbjct: 879 CFKCNQPGHFSRECPQQEATSYRSPAANANANSGLCFKCNQPGHFSRDCPGQAANSYGAS 938
Query: 64 GQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR--------------CYACHQAGH 109
++ +CY CN +GHFAR+CP ++ CY C+Q GH
Sbjct: 939 A------GVNAGAAGLCYKCNQTGHFARDCPGQAANSYGASAGANSGTAGLCYKCNQPGH 992
Query: 110 MAKECPGQTA 119
A++C GQ A
Sbjct: 993 FARDCQGQAA 1002
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 9 CYNCFDFGHYQYSCPQKS------SADARGDKVGIVCYKCNNYGHFARECATESVT 58
CY C GH+ CP ++ SA A G+ CYKCN GHFAR+C ++ T
Sbjct: 949 CYKCNQTGHFARDCPGQAANSYGASAGANSGTAGL-CYKCNQPGHFARDCQGQAAT 1003
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 46/121 (38%), Gaps = 43/121 (35%)
Query: 53 ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP------------------ 94
AT S+T Y +++C+V C SS H +NCP
Sbjct: 823 ATPSITRY--------SQNCSV--------CGSSEHSVQNCPAVAMDMQQPAASGYAASS 866
Query: 95 ------NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDM---SLTCYVCGHQGHLSYD 145
S C+ C+Q GH ++ECP Q A P + S C+ C GH S D
Sbjct: 867 YGSSPGEAGSGLCFKCNQPGHFSRECPQQEATSYRSPAANANANSGLCFKCNQPGHFSRD 926
Query: 146 C 146
C
Sbjct: 927 C 927
>gi|322710166|gb|EFZ01741.1| hypothetical protein MAA_02970 [Metarhizium anisopliae ARSEF 23]
Length = 452
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 65/150 (43%), Gaps = 16/150 (10%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TC 59
T +C+NC + GH C Q+ + + I C C GH R+C V C
Sbjct: 242 DTGLRKCHNCGELGHSSKFCTQEKVE--KKAQPAISCSNCGGEGHRIRDCPEPRVDKFAC 299
Query: 60 YNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
NC GH A DC ++ C C GH ++CP S+ C C Q GHMAKEC
Sbjct: 300 RNCGKSGHRASDCEEPPNLDNMECRKCGEKGHMGKDCPQGGSRACRNCGQEGHMAKEC-- 357
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+P ++TC C GH S DC
Sbjct: 358 ------DQPRNMDNVTCRNCEKTGHFSRDC 381
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 61/149 (40%), Gaps = 22/149 (14%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT----ESVTCYN 61
I C NC GH CP+ R DK C C GH A +C +++ C
Sbjct: 273 AISCSNCGGEGHRIRDCPE-----PRVDK--FACRNCGKSGHRASDCEEPPNLDNMECRK 325
Query: 62 CSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP---NDSSKRCYACHQAGHMAKECPGQT 118
C +GH+ KDC S C NC GH A+ C N + C C + GH +++C
Sbjct: 326 CGEKGHMGKDCPQGGSRACRNCGQEGHMAKECDQPRNMDNVTCRNCEKTGHFSRDC---- 381
Query: 119 AGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
PEP + C C GH CK
Sbjct: 382 ----PEPKDWSKVQCSNCQKFGHTKVRCK 406
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT-CYNCSGQ 65
++C C GH + +CP + + +A D C+ C GH A +C T T C C +
Sbjct: 26 VKCGACSQEGHEEANCPNQHT-EAGNDDANNKCFNCGETGHRAADCPTPRDTACRYCKKE 84
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
GH+ +DC K ++C NC GH +NC N
Sbjct: 85 GHMIRDCPDKPPMVCDNCGQEGHMRKNCEN 114
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 43/110 (39%), Gaps = 9/110 (8%)
Query: 14 DFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---------CYNCSG 64
D+G+ + D+ ++ + C C+ GH C + C+NC
Sbjct: 3 DWGNSGDNWGSAGGNDSGWNQPQVKCGACSQEGHEEANCPNQHTEAGNDDANNKCFNCGE 62
Query: 65 QGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
GH A DC C C GH R+CP+ C C Q GHM K C
Sbjct: 63 TGHRAADCPTPRDTACRYCKKEGHMIRDCPDKPPMVCDNCGQEGHMRKNC 112
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 19/99 (19%)
Query: 57 VTCYNCSGQGHVAKDCTVK--------SSIICYNCNSSGHFARNCPNDSSKRCYACHQAG 108
V C CS +GH +C + ++ C+NC +GH A +CP C C + G
Sbjct: 26 VKCGACSQEGHEEANCPNQHTEAGNDDANNKCFNCGETGHRAADCPTPRDTACRYCKKEG 85
Query: 109 HMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
HM ++CP K P + C CG +GH+ +C+
Sbjct: 86 HMIRDCP----DKPP-------MVCDNCGQEGHMRKNCE 113
>gi|358390183|gb|EHK39589.1| hypothetical protein TRIATDRAFT_302941 [Trichoderma atroviride IMI
206040]
Length = 176
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 66/124 (53%), Gaps = 15/124 (12%)
Query: 38 VCYKCNNYGHFARECATES-VTCYNCSGQGHVAKDCT--VKSSIICYNCNSSGHFARNCP 94
CY C N GH AR+C T+ CYNC G+GH+++DCT +K + CY C GH +R+CP
Sbjct: 8 ACYSCGNAGHQARDCPTKGPAKCYNCGGEGHLSRDCTEPMKDNKSCYKCGQPGHISRDCP 67
Query: 95 NDSSK-------RCYACHQAGHMAKECP-----GQTAGKSPEPVVDMSLTCYVCGHQGHL 142
+ CY C + GH+A+ CP G + G + TCY CG GH+
Sbjct: 68 QAGAAGGGQAGTECYKCGEKGHIARSCPKSGFGGNSYGGNSGYGGGAGKTCYSCGGYGHM 127
Query: 143 SYDC 146
S +C
Sbjct: 128 SREC 131
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 63/127 (49%), Gaps = 24/127 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----------- 57
CY C GH CPQ +A + G CYKC GH AR C
Sbjct: 53 CYKCGQPGHISRDCPQAGAAGG--GQAGTECYKCGEKGHIARSCPKSGFGGNSYGGNSGY 110
Query: 58 ------TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS---KRCYACHQAG 108
TCY+C G GH++++C + + CYNC SGH++R+CP +++ K CY C Q G
Sbjct: 111 GGGAGKTCYSCGGYGHMSRECV--NGMKCYNCGESGHYSRDCPKEAAGGEKICYKCQQGG 168
Query: 109 HMAKECP 115
H+ +CP
Sbjct: 169 HVQAQCP 175
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 69/172 (40%), Gaps = 48/172 (27%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA---TESV 57
M CY+C + GH CP K A CY C GH +R+C ++
Sbjct: 1 MDYAPRGACYSCGNAGHQARDCPTKGPAK---------CYNCGGEGHLSRDCTEPMKDNK 51
Query: 58 TCYNCSGQGHVAKDCT-------VKSSIICYNCNSSGHFARNCPND-------------- 96
+CY C GH+++DC ++ CY C GH AR+CP
Sbjct: 52 SCYKCGQPGHISRDCPQAGAAGGGQAGTECYKCGEKGHIARSCPKSGFGGNSYGGNSGYG 111
Query: 97 --SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ K CY+C GHM++EC + CY CG GH S DC
Sbjct: 112 GGAGKTCYSCGGYGHMSREC-------------VNGMKCYNCGESGHYSRDC 150
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 46/99 (46%), Gaps = 11/99 (11%)
Query: 7 IQCYNCFDFGHYQYSCPQKS-------SADARGDKVGIVCYKCNNYGHFARECATESVTC 59
+CY C + GH SCP+ G G CY C YGH +REC + C
Sbjct: 79 TECYKCGEKGHIARSCPKSGFGGNSYGGNSGYGGGAGKTCYSCGGYGHMSRECVN-GMKC 137
Query: 60 YNCSGQGHVAKDCTVKSS---IICYNCNSSGHFARNCPN 95
YNC GH ++DC +++ ICY C GH CPN
Sbjct: 138 YNCGESGHYSRDCPKEAAGGEKICYKCQQGGHVQAQCPN 176
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 65/168 (38%), Gaps = 41/168 (24%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES------ 56
+ +CYNC GH C + K CYKC GH +R+C
Sbjct: 24 TKGPAKCYNCGGEGHLSRDCTEPM-------KDNKSCYKCGQPGHISRDCPQAGAAGGGQ 76
Query: 57 --VTCYNCSGQGHVAKDCT----------------VKSSIICYNCNSSGHFARNCPNDSS 98
CY C +GH+A+ C + CY+C GH +R C N
Sbjct: 77 AGTECYKCGEKGHIARSCPKSGFGGNSYGGNSGYGGGAGKTCYSCGGYGHMSRECVN--G 134
Query: 99 KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+CY C ++GH +++CP + AG CY C GH+ C
Sbjct: 135 MKCYNCGESGHYSRDCPKEAAGG--------EKICYKCQQGGHVQAQC 174
>gi|154345720|ref|XP_001568797.1| universal minicircle sequence binding protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134066139|emb|CAM43929.1| universal minicircle sequence binding protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|449310608|gb|AGE92531.1| universal minicircle sequence binding protein [Leishmania
braziliensis]
Length = 115
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 16/121 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV--TCYNC 62
S + CY C + GH SCP+ ++ + CY C GH +R+C +E +C+NC
Sbjct: 2 SALTCYKCGEAGHMSRSCPRVAATRS--------CYNCGETGHMSRDCPSERKPKSCFNC 53
Query: 63 SGQGHVAKDCTVKS-----SIICYNCNSSGHFARNCPNDSS-KRCYACHQAGHMAKECPG 116
H++++CT ++ + CYNC +GH +R+CPN+ K CY C H+++ECP
Sbjct: 54 GSTEHLSRECTNEAKAGADTRSCYNCGGTGHMSRDCPNERKPKSCYNCGSTEHLSRECPD 113
Query: 117 Q 117
+
Sbjct: 114 R 114
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 18/118 (15%)
Query: 37 IVCYKCNNYGHFARECATESVT--CYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNC 93
+ CYKC GH +R C + T CYNC GH+++DC + + C+NC S+ H +R C
Sbjct: 4 LTCYKCGEAGHMSRSCPRVAATRSCYNCGETGHMSRDCPSERKPKSCFNCGSTEHLSREC 63
Query: 94 PNDS-----SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
N++ ++ CY C GHM+++CP + KS CY CG HLS +C
Sbjct: 64 TNEAKAGADTRSCYNCGGTGHMSRDCPNERKPKS----------CYNCGSTEHLSREC 111
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 11/78 (14%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
S++ CY C +GH +R+CP ++ R CY C + GHM+++CP + KS C+
Sbjct: 2 SALTCYKCGEAGHMSRSCPRVAATRSCYNCGETGHMSRDCPSERKPKS----------CF 51
Query: 135 VCGHQGHLSYDCKLVQKS 152
CG HLS +C K+
Sbjct: 52 NCGSTEHLSRECTNEAKA 69
>gi|429849218|gb|ELA24622.1| zinc knuckle domain protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 185
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 61/133 (45%), Gaps = 26/133 (19%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC------------- 52
T CY C GH CPQ + CYKC GH AR C
Sbjct: 55 TKSCYRCGQAGHISRDCPQGGNVGGG-GASSSECYKCGEVGHIARNCPKSGGGYGGGGAC 113
Query: 53 -------ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS---KRCY 102
TCY+C G GH+++DCT S CYNC +GHF+R+CP +SS K CY
Sbjct: 114 YNSGGYGGASQKTCYSCGGYGHMSRDCTNGSK--CYNCGENGHFSRDCPKESSGGEKICY 171
Query: 103 ACHQAGHMAKECP 115
C Q GH+ +CP
Sbjct: 172 KCQQPGHVQSQCP 184
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 38 VCYKCNNYGHFARECATE-SVTCYNCSGQGHVAKDCT--VKSSIICYNCNSSGHFARNCP 94
C+ C GH AREC + CYNC +GH+++DC K + CY C +GH +R+CP
Sbjct: 13 TCFTCGAAGHQARECPNRGAAKCYNCGNEGHMSRDCPEGPKDTKSCYRCGQAGHISRDCP 72
Query: 95 ND--------SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMS--------LTCYVCGH 138
SS CY C + GH+A+ CP G S TCY CG
Sbjct: 73 QGGNVGGGGASSSECYKCGEVGHIARNCPKSGGGYGGGGACYNSGGYGGASQKTCYSCGG 132
Query: 139 QGHLSYDC 146
GH+S DC
Sbjct: 133 YGHMSRDC 140
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 67/168 (39%), Gaps = 52/168 (30%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT---ESVTCYNCSGQ 65
C+ C GH CP + +A CY C N GH +R+C ++ +CY C
Sbjct: 14 CFTCGAAGHQARECPNRGAAK---------CYNCGNEGHMSRDCPEGPKDTKSCYRCGQA 64
Query: 66 GHVAKDCT--------VKSSIICYNCNSSGHFARNCPND-------------------SS 98
GH+++DC SS CY C GH ARNCP S
Sbjct: 65 GHISRDCPQGGNVGGGGASSSECYKCGEVGHIARNCPKSGGGYGGGGACYNSGGYGGASQ 124
Query: 99 KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
K CY+C GHM+++C CY CG GH S DC
Sbjct: 125 KTCYSCGGYGHMSRDC-------------TNGSKCYNCGENGHFSRDC 159
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 48 FARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN--DSSKRCYACH 105
F A + TC+ C GH A++C + + CYNC + GH +R+CP +K CY C
Sbjct: 3 FQGSAAPPARTCFTCGAAGHQARECPNRGAAKCYNCGNEGHMSRDCPEGPKDTKSCYRCG 62
Query: 106 QAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
QAGH++++CP S CY CG GH++ +C
Sbjct: 63 QAGHISRDCPQGGNVGG---GGASSSECYKCGEVGHIARNC 100
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 70/169 (41%), Gaps = 45/169 (26%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA---------TES 56
+CYNC + GH CP+ G K CY+C GH +R+C S
Sbjct: 32 AAKCYNCGNEGHMSRDCPE-------GPKDTKSCYRCGQAGHISRDCPQGGNVGGGGASS 84
Query: 57 VTCYNCSGQGHVAKDCTVK-------------------SSIICYNCNSSGHFARNCPNDS 97
CY C GH+A++C S CY+C GH +R+C N S
Sbjct: 85 SECYKCGEVGHIARNCPKSGGGYGGGGACYNSGGYGGASQKTCYSCGGYGHMSRDCTNGS 144
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+CY C + GH +++CP +++G CY C GH+ C
Sbjct: 145 --KCYNCGENGHFSRDCPKESSGG--------EKICYKCQQPGHVQSQC 183
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 14/105 (13%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKS----------SADARGDKVGIVCYKCNNYGHFARECA 53
S+ +CY C + GH +CP+ ++ G CY C YGH +R+C
Sbjct: 82 ASSSECYKCGEVGHIARNCPKSGGGYGGGGACYNSGGYGGASQKTCYSCGGYGHMSRDC- 140
Query: 54 TESVTCYNCSGQGHVAKDCTVKSS---IICYNCNSSGHFARNCPN 95
T CYNC GH ++DC +SS ICY C GH CPN
Sbjct: 141 TNGSKCYNCGENGHFSRDCPKESSGGEKICYKCQQPGHVQSQCPN 185
>gi|67537882|ref|XP_662715.1| hypothetical protein AN5111.2 [Aspergillus nidulans FGSC A4]
gi|40743102|gb|EAA62292.1| hypothetical protein AN5111.2 [Aspergillus nidulans FGSC A4]
Length = 176
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA--------------T 54
CY C GH CPQ + + G CYKC GH AR C+
Sbjct: 56 CYRCGAVGHISRECPQ--AGENERPAGGQECYKCGRVGHIARNCSQGGSYGGGFGGGYGG 113
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS--SKRCYACHQAGHMAK 112
TCY+C G GH+A+DCT CYNC +GH +R+CP ++ + CY C Q GH+
Sbjct: 114 RQQTCYSCGGFGHMARDCTQGQK--CYNCGETGHVSRDCPTEAKGERVCYQCKQPGHIQS 171
Query: 113 ECP 115
CP
Sbjct: 172 ACP 174
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 36 GIVCYKCNNYGHFARECATESV-TCYNCS-----GQGHVAKDCTV-KSSIICYNCNSSGH 88
G VC+ C H AR+C + TCYNC GQGHV+++CTV CY C + GH
Sbjct: 5 GRVCFNCGEATHQARDCPKKGTPTCYNCGVLDRLGQGHVSRECTVAPKEKSCYRCGAVGH 64
Query: 89 FARNCPNDSS-------KRCYACHQAGHMAKECP--GQTAGKSPEPVVDMSLTCYVCGHQ 139
+R CP + CY C + GH+A+ C G G TCY CG
Sbjct: 65 ISRECPQAGENERPAGGQECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGGF 124
Query: 140 GHLSYDCKLVQK 151
GH++ DC QK
Sbjct: 125 GHMARDCTQGQK 136
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 70/177 (39%), Gaps = 50/177 (28%)
Query: 9 CYNCFDFGHYQYSCPQKSSAD----ARGDKVG--------------IVCYKCNNYGHFAR 50
C+NC + H CP+K + D++G CY+C GH +R
Sbjct: 8 CFNCGEATHQARDCPKKGTPTCYNCGVLDRLGQGHVSRECTVAPKEKSCYRCGAVGHISR 67
Query: 51 ECATESVT--------CYNCSGQGHVAKDCT-------------VKSSIICYNCNSSGHF 89
EC CY C GH+A++C+ CY+C GH
Sbjct: 68 ECPQAGENERPAGGQECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGGFGHM 127
Query: 90 ARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
AR+C ++CY C + GH++++CP + G+ CY C GH+ C
Sbjct: 128 ARDC--TQGQKCYNCGETGHVSRDCPTEAKGER---------VCYQCKQPGHIQSAC 173
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGI----VCYKCNNYGHFARECATESVTCYNCS 63
+CY C GH +C Q S CY C +GH AR+C T+ CYNC
Sbjct: 83 ECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGGFGHMARDC-TQGQKCYNCG 141
Query: 64 GQGHVAKDC--TVKSSIICYNCNSSGHFARNCPND 96
GHV++DC K +CY C GH CPN+
Sbjct: 142 ETGHVSRDCPTEAKGERVCYQCKQPGHIQSACPNN 176
>gi|310792945|gb|EFQ28406.1| zinc knuckle [Glomerella graminicola M1.001]
Length = 229
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 74/179 (41%), Gaps = 46/179 (25%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---- 58
S++ CYNC GH CP + +A+ CY C GH +C T ++
Sbjct: 23 SSAERLCYNCKQPGHESNGCPLPRTTEAK------QCYHCQGLGHVQADCPTLRLSGAGT 76
Query: 59 ---CYNCSGQGHVAKDCTVKSSI----------------------------ICYNCNSSG 87
CYNC GH+A+ C + + CY C
Sbjct: 77 SGRCYNCGQPGHLARACPSPAGVNMGRGGPVPRGAYGGYGRGGFTGGPRPATCYKCGGPN 136
Query: 88 HFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
HFAR+C + +CYAC + GH++++C G P+ TCY CG GH+S DC
Sbjct: 137 HFARDC-QAQAMKCYACGKLGHISRDCTAPNGG----PLNTAGKTCYQCGEAGHISRDC 190
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 71/167 (42%), Gaps = 44/167 (26%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES------ 56
+T QCY+C GH Q CP + G CY C GH AR C + +
Sbjct: 47 TTEAKQCYHCQGLGHVQADCP---TLRLSGAGTSGRCYNCGQPGHLARACPSPAGVNMGR 103
Query: 57 -----------------------VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
TCY C G H A+DC ++ + CY C GH +R+C
Sbjct: 104 GGPVPRGAYGGYGRGGFTGGPRPATCYKCGGPNHFARDCQAQA-MKCYACGKLGHISRDC 162
Query: 94 P-------NDSSKRCYACHQAGHMAKECPGQ-TAGKSPEPVVDMSLT 132
N + K CY C +AGH++++CP + T G+ P D+ LT
Sbjct: 163 TAPNGGPLNTAGKTCYQCGEAGHISRDCPQKNTNGEIPN---DVDLT 206
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 60/136 (44%), Gaps = 26/136 (19%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + + CY+C GH +CP
Sbjct: 8 ACYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQADCP 67
Query: 95 N------DSSKRCYACHQAGHMAKECP---GQTAGK-SPEP-------------VVDMSL 131
+S RCY C Q GH+A+ CP G G+ P P
Sbjct: 68 TLRLSGAGTSGRCYNCGQPGHLARACPSPAGVNMGRGGPVPRGAYGGYGRGGFTGGPRPA 127
Query: 132 TCYVCGHQGHLSYDCK 147
TCY CG H + DC+
Sbjct: 128 TCYKCGGPNHFARDCQ 143
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S CY C + GH+A C + + + CY C Q GH + CP P + CY
Sbjct: 5 SRRACYKCGNVGHYAEVC-SSAERLCYNCKQPGHESNGCP--------LPRTTEAKQCYH 55
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ DC ++ S
Sbjct: 56 CQGLGHVQADCPTLRLS 72
>gi|71418282|ref|XP_810805.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi strain CL Brener]
gi|16225904|gb|AAL16022.1|AF420314_1 zinc finger protein PDZ5 [Trypanosoma cruzi]
gi|70875394|gb|EAN88954.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi]
Length = 134
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 60/130 (46%), Gaps = 21/130 (16%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----- 57
+ + CYNC GH CP + GD+ CY C GH +REC T
Sbjct: 7 TRGSRACYNCGQPGHLSRECPTRPPG-VMGDRA---CYNCGRMGHLSRECPTRPPGVMGD 62
Query: 58 -TCYNCSGQGHVAKDCTVKSSI--------ICYNCNSSGHFARNCPN---DSSKRCYACH 105
CYNC GH++++C + + CY+C GH AR+CPN + CY C
Sbjct: 63 RACYNCGRMGHLSRECPNRPAGGFRGVARGACYHCQQEGHLARDCPNAPPGGERACYNCG 122
Query: 106 QAGHMAKECP 115
Q GH ++ CP
Sbjct: 123 QTGHTSRACP 132
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 62/141 (43%), Gaps = 30/141 (21%)
Query: 27 SADARGDKVGIVCYKCNNYGHFARECATESV------TCYNCSGQGHVAKDCTVKSSII- 79
+A RG + CY C GH +REC T CYNC GH++++C + +
Sbjct: 4 NAMTRGSRA---CYNCGQPGHLSRECPTRPPGVMGDRACYNCGRMGHLSRECPTRPPGVM 60
Query: 80 ----CYNCNSSGHFARNCPNDSSK--------RCYACHQAGHMAKECPGQTAGKSPEPVV 127
CYNC GH +R CPN + CY C Q GH+A++CP G
Sbjct: 61 GDRACYNCGRMGHLSRECPNRPAGGFRGVARGACYHCQQEGHLARDCPNAPPGG------ 114
Query: 128 DMSLTCYVCGHQGHLSYDCKL 148
CY CG GH S C +
Sbjct: 115 --ERACYNCGQTGHTSRACPV 133
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPNDSS-----KRCYACHQAGHMAKECPGQTAGKS 122
+A + + S CYNC GH +R CP + CY C + GH+++ECP + G
Sbjct: 1 MADNAMTRGSRACYNCGQPGHLSRECPTRPPGVMGDRACYNCGRMGHLSRECPTRPPG-- 58
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDC 146
V CY CG GHLS +C
Sbjct: 59 ----VMGDRACYNCGRMGHLSREC 78
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----TCYNCSG 64
CYNC GH CP + + RG G CY C GH AR+C CYNC
Sbjct: 65 CYNCGRMGHLSRECPNRPAGGFRGVARG-ACYHCQQEGHLARDCPNAPPGGERACYNCGQ 123
Query: 65 QGHVAKDCTVK 75
GH ++ C VK
Sbjct: 124 TGHTSRACPVK 134
>gi|1399347|gb|AAB03264.1| DNA binding protein, partial [Gallus gallus]
Length = 106
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 18/113 (15%)
Query: 38 VCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNC 93
+CY+C GH A++C E CYNC GH+AKDC + CYNC GH AR+C
Sbjct: 8 ICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 67
Query: 94 PNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ ++CY+C + GH+ K+C + CY CG GH++ +C
Sbjct: 68 DHADKQKCYSCGEFGHIQKDC--------------TKVKCYRCGETGHVTINC 106
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 14/96 (14%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKEC 114
CY C GH+AKDC ++ CYNC GH A++C +R CY C + GH+A++C
Sbjct: 8 ICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 67
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
K CY CG GH+ DC V+
Sbjct: 68 DHADKQK-----------CYSCGEFGHIQKDCTKVK 92
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 16/118 (13%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT-- 58
MSS+ CY C + GH C D + D+ CY C GH A++C
Sbjct: 1 MSSSLPDICYRCGESGHLAKDC------DLQEDEA---CYNCGRGGHIAKDCKEPKRERE 51
Query: 59 --CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
CYNC GH+A+DC CY+C GH ++C + +CY C + GH+ C
Sbjct: 52 QCCYNCGKPGHLARDCDHADKQKCYSCGEFGHIQKDC---TKVKCYRCGETGHVTINC 106
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 79 ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGH 138
ICY C SGH A++C + CY C + GH+AK+C EP + CY CG
Sbjct: 8 ICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDC--------KEPKREREQCCYNCGK 59
Query: 139 QGHLSYDCKLVQK 151
GHL+ DC K
Sbjct: 60 PGHLARDCDHADK 72
>gi|321469269|gb|EFX80250.1| putative germ-line specific RNA helicase vasa protein [Daphnia
pulex]
Length = 761
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 68/150 (45%), Gaps = 24/150 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------TCYNC 62
CY C + GH CP +S GD+ C+KC GH AR+C T TC+ C
Sbjct: 131 CYKCGEEGHMSRECPNSNSGGGGGDRT---CHKCQQPGHMARDCPTGGGGGGGDRTCHKC 187
Query: 63 SGQGHVAKDCTVKS---SIICYNCNSSGHFARNCPNDSS---KRCYACHQAGHMAKECPG 116
GH+A+DC C+ C +GH AR+CP + C C AGHMA+ECP
Sbjct: 188 QQPGHMARDCPTGGGGGDRACHKCQETGHMARDCPTGGGGGPRTCNKCGDAGHMARECPS 247
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G + C+ C GH + +C
Sbjct: 248 GGGGDT---------KCFKCYKLGHSTKEC 268
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 12/97 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----TCYNCSG 64
C+ C GH CP + GD+ C+KC GH AR+C T TC C
Sbjct: 184 CHKCQQPGHMARDCP---TGGGGGDRA---CHKCQETGHMARDCPTGGGGGPRTCNKCGD 237
Query: 65 QGHVAKDCTVKS--SIICYNCNSSGHFARNCPNDSSK 99
GH+A++C C+ C GH + CP+ +K
Sbjct: 238 AGHMARECPSGGGGDTKCFKCYKLGHSTKECPDPYNK 274
>gi|255716112|ref|XP_002554337.1| KLTH0F02904p [Lachancea thermotolerans]
gi|238935720|emb|CAR23900.1| KLTH0F02904p [Lachancea thermotolerans CBS 6340]
Length = 162
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 71/154 (46%), Gaps = 33/154 (21%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH Q C + + + CY C GH EC + CYNC+ GH+
Sbjct: 27 CYNCNQPGHVQSDCTMAKTVEFK------QCYNCGETGHVKSECDVQ--RCYNCNQTGHI 78
Query: 69 AKDC--------------TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
++DC + + + CY C H A++C SK CYAC + GH++K+C
Sbjct: 79 SRDCADPKKPRFAGGAAPSRANKVSCYRCGGPNHMAKDCLQSDSK-CYACGKVGHISKDC 137
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
P ++ K TCY C GH+S DC +
Sbjct: 138 PAGSSAK----------TCYNCNEAGHISRDCPV 161
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 29/124 (23%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-------------- 53
QCYNC + GH + C + CY CN GH +R+CA
Sbjct: 50 QCYNCGETGHVKSECDVQR------------CYNCNQTGHISRDCADPKKPRFAGGAAPS 97
Query: 54 -TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS-KRCYACHQAGHMA 111
V+CY C G H+AKDC ++S CY C GH +++CP SS K CY C++AGH++
Sbjct: 98 RANKVSCYRCGGPNHMAKDC-LQSDSKCYACGKVGHISKDCPAGSSAKTCYNCNEAGHIS 156
Query: 112 KECP 115
++CP
Sbjct: 157 RDCP 160
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 62/117 (52%), Gaps = 14/117 (11%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCP 94
CY C GH A +C +E + CYNC+ GHV DCT+ ++ CYNC +GH C
Sbjct: 7 ACYVCGKIGHLAEDCESERL-CYNCNQPGHVQSDCTMAKTVEFKQCYNCGETGHVKSEC- 64
Query: 95 NDSSKRCYACHQAGHMAKEC-----PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+RCY C+Q GH++++C P G +P +S CY CG H++ DC
Sbjct: 65 --DVQRCYNCNQTGHISRDCADPKKPRFAGGAAPSRANKVS--CYRCGGPNHMAKDC 117
>gi|303322458|ref|XP_003071222.1| zinc knuckle containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240110921|gb|EER29077.1| zinc knuckle containing protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 195
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 61/129 (47%), Gaps = 27/129 (20%)
Query: 8 QCYNCFDFGHYQYSCPQK-SSADARGDKVGIVCYKCNNYGHFARECATES---------- 56
+CY C GH CPQ S +ARG + CYKC GH +R C S
Sbjct: 72 ECYKCGQVGHISRECPQGGESGEARGQE----CYKCGQVGHISRNCGQYSGYNGGGYNAG 127
Query: 57 --------VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND--SSKRCYACHQ 106
+TCY+C G GH A+DCT CYNC +GH +R+C + + CY C Q
Sbjct: 128 SYRYGNRPLTCYSCGGYGHRARDCTQGQK--CYNCGETGHVSRDCTTEGKGERVCYKCKQ 185
Query: 107 AGHMAKECP 115
GH+ CP
Sbjct: 186 PGHVQAACP 194
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 66/162 (40%), Gaps = 38/162 (23%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-------TESVTCYN 61
CY C GH CPQ A G G CYKC GH +REC CY
Sbjct: 46 CYRCGLTGHISRDCPQ---AGESGGARGQECYKCGQVGHISRECPQGGESGEARGQECYK 102
Query: 62 CSGQGHVAKDCTVKS-----------------SIICYNCNSSGHFARNCPNDSSKRCYAC 104
C GH++++C S + CY+C GH AR+C ++CY C
Sbjct: 103 CGQVGHISRNCGQYSGYNGGGYNAGSYRYGNRPLTCYSCGGYGHRARDC--TQGQKCYNC 160
Query: 105 HQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ GH++++C + G+ CY C GH+ C
Sbjct: 161 GETGHVSRDCTTEGKGER---------VCYKCKQPGHVQAAC 193
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADA--------RGDKVGIVCYKCNNYGHFARECATESVTC 59
+CY C GH +C Q S + R + CY C YGH AR+C T+ C
Sbjct: 99 ECYKCGQVGHISRNCGQYSGYNGGGYNAGSYRYGNRPLTCYSCGGYGHRARDC-TQGQKC 157
Query: 60 YNCSGQGHVAKDCTV--KSSIICYNCNSSGHFARNCPN 95
YNC GHV++DCT K +CY C GH CPN
Sbjct: 158 YNCGETGHVSRDCTTEGKGERVCYKCKQPGHVQAACPN 195
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 50/113 (44%), Gaps = 20/113 (17%)
Query: 58 TCYNCSGQGHVAKDCTVKSSI------ICYNCNSSGHFARNCPNDSS------KRCYACH 105
+CY C GH+++DC CY C GH +R CP + CY C
Sbjct: 45 SCYRCGLTGHISRDCPQAGESGGARGQECYKCGQVGHISRECPQGGESGEARGQECYKCG 104
Query: 106 QAGHMAKECPGQTAGKSPEPVVDMS-------LTCYVCGHQGHLSYDCKLVQK 151
Q GH+++ C GQ +G + S LTCY CG GH + DC QK
Sbjct: 105 QVGHISRNC-GQYSGYNGGGYNAGSYRYGNRPLTCYSCGGYGHRARDCTQGQK 156
>gi|226292807|gb|EEH48227.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 238
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 68/155 (43%), Gaps = 22/155 (14%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---- 58
+T T QCY+C GH Q CP + G CY CN GH AR C + +
Sbjct: 56 TTETKQCYHCQGLGHVQADCP---TLRLNGGATSGRCYNCNILGHLARNCPSTGMQGAGR 112
Query: 59 -------CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMA 111
+N +G A + CY C HFAR+C S K CYAC + GH++
Sbjct: 113 GVPSARGVFNSPFRGAFAG---YARTATCYKCGGPNHFARDCQAQSMK-CYACGKLGHIS 168
Query: 112 KECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++C G P+ + CY C GH+S DC
Sbjct: 169 RDCTAPNGG----PLSSVGKVCYKCSQAGHISRDC 199
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 26/118 (22%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADA---------------RGDKVG----IVCYKCNNYGHF 48
+CYNC GH +CP A RG G CYKC HF
Sbjct: 88 RCYNCNILGHLARNCPSTGMQGAGRGVPSARGVFNSPFRGAFAGYARTATCYKCGGPNHF 147
Query: 49 ARECATESVTCYNCSGQGHVAKDCTVK-----SSI--ICYNCNSSGHFARNCPNDSSK 99
AR+C +S+ CY C GH+++DCT SS+ +CY C+ +GH +R+CP ++++
Sbjct: 148 ARDCQAQSMKCYACGKLGHISRDCTAPNGGPLSSVGKVCYKCSQAGHISRDCPTNTTE 205
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 51/131 (38%), Gaps = 46/131 (35%)
Query: 50 RECATESVTCYNCSGQGHVAKDCTV------KSSIICYNCNSSGHFARNCPNDS------ 97
R TE+ CY+C G GHV DC +S CYNCN GH ARNCP+
Sbjct: 53 RPRTTETKQCYHCQGLGHVQADCPTLRLNGGATSGRCYNCNILGHLARNCPSTGMQGAGR 112
Query: 98 ----------------------SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
+ CY C H A++C Q S+ CY
Sbjct: 113 GVPSARGVFNSPFRGAFAGYARTATCYKCGGPNHFARDCQAQ------------SMKCYA 160
Query: 136 CGHQGHLSYDC 146
CG GH+S DC
Sbjct: 161 CGKLGHISRDC 171
>gi|323331856|gb|EGA73268.1| Gis2p [Saccharomyces cerevisiae AWRI796]
gi|323346793|gb|EGA81072.1| Gis2p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352848|gb|EGA85150.1| Gis2p [Saccharomyces cerevisiae VL3]
Length = 114
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 62/118 (52%), Gaps = 24/118 (20%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-------ESVTCY 60
QCYNC + GH + C + C+ CN GH +REC V+CY
Sbjct: 9 QCYNCGETGHVRSECTVQR------------CFNCNQTGHISRECPEPKKTSRFSKVSCY 56
Query: 61 NCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
C G H+AKDC + S + CY C +GH +R+C ND + CY C++ GH++K+CP
Sbjct: 57 KCGGPNHMAKDCMKEDGISGLKCYTCGQAGHMSRDCQND--RLCYNCNETGHISKDCP 112
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 48/101 (47%), Gaps = 17/101 (16%)
Query: 53 ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND------SSKRCYACHQ 106
E CYNC GHV +CTV+ C+NCN +GH +R CP S CY C
Sbjct: 4 TVEFKQCYNCGETGHVRSECTVQR---CFNCNQTGHISRECPEPKKTSRFSKVSCYKCGG 60
Query: 107 AGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
HMAK+C + L CY CG GH+S DC+
Sbjct: 61 PNHMAKDCMKEDG--------ISGLKCYTCGQAGHMSRDCQ 93
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 1 MSSTSTIQ-CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES--- 56
+ S T+Q C+NC GH CP+ +R KV CYKC H A++C E
Sbjct: 19 VRSECTVQRCFNCNQTGHISRECPEPKKT-SRFSKVS--CYKCGGPNHMAKDCMKEDGIS 75
Query: 57 -VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
+ CY C GH+++DC ++ +CYNCN +GH +++CP
Sbjct: 76 GLKCYTCGQAGHMSRDC--QNDRLCYNCNETGHISKDCP 112
>gi|401420040|ref|XP_003874509.1| putative poly-zinc finger protein 2 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490745|emb|CBZ26009.1| putative poly-zinc finger protein 2 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 135
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 37 IVCYKCNNYGHFAREC--ATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFAR 91
+VCY+C GH +REC A +S C+ C GHVAK+C C+ C GH AR
Sbjct: 1 MVCYRCGGVGHQSRECTSAADSAPCFRCGKPGHVAKECVSTITAEEAPCFYCQKPGHRAR 60
Query: 92 NCPNDSSK----RCYACHQAGHMAKECP--------------GQTAGKSPEPVVDMSLTC 133
+CP+ K CY C Q GH+A ECP G++ +P+ V +C
Sbjct: 61 DCPDAPPKSETVMCYNCSQKGHIASECPNPAHCYLCNEDGHIGRSCPTAPKRSV-AEKSC 119
Query: 134 YVCGHQGHLSYDC 146
CG +GHL DC
Sbjct: 120 RKCGKKGHLRKDC 132
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-----TES 56
S+ + C+ C GH C +A+ C+ C GH AR+C +E+
Sbjct: 18 SAADSAPCFRCGKPGHVAKECVSTITAEE------APCFYCQKPGHRARDCPDAPPKSET 71
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND-----SSKRCYACHQAGHMA 111
V CYNCS +GH+A +C + CY CN GH R+CP + K C C + GH+
Sbjct: 72 VMCYNCSQKGHIASECP--NPAHCYLCNEDGHIGRSCPTAPKRSVAEKSCRKCGKKGHLR 129
Query: 112 KECP 115
K+CP
Sbjct: 130 KDCP 133
>gi|403216232|emb|CCK70729.1| hypothetical protein KNAG_0F00600 [Kazachstania naganishii CBS
8797]
Length = 157
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 2 SSTSTIQCYNCFDFGHYQYSC--PQKSSADARGDKVGIVCYKCNNYGHFARECATESVTC 59
S S +C+NC GH C P+K A A G + G+ CYKC H AR+C E C
Sbjct: 60 SECSVQRCFNCNQTGHISKDCTEPRKPRAQAAGGR-GMSCYKCGGPNHLARDCQQEDTKC 118
Query: 60 YNCSGQGHVAKDCTV-KSSIICYNCNSSGHFARNCP 94
Y+C GH+++DC +CYNCN SGH +R+CP
Sbjct: 119 YSCGNFGHISRDCPDGPGDKVCYNCNQSGHISRDCP 154
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 67/148 (45%), Gaps = 29/148 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH Q C + + + CY C GH EC+ + C+NC+ GH+
Sbjct: 25 CYNCGQPGHVQSECTLPRTVEHK------QCYNCGETGHVKSECSVQR--CFNCNQTGHI 76
Query: 69 AKDCTVKSS----------IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQT 118
+KDCT + CY C H AR+C + +K CY+C GH++++CP
Sbjct: 77 SKDCTEPRKPRAQAAGGRGMSCYKCGGPNHLARDCQQEDTK-CYSCGNFGHISRDCPDGP 135
Query: 119 AGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
K CY C GH+S DC
Sbjct: 136 GDK----------VCYNCNQSGHISRDC 153
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 63/115 (54%), Gaps = 12/115 (10%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCP 94
C+ C GH A EC ++ + CYNC GHV +CT+ ++ CYNC +GH C
Sbjct: 5 ACFVCGKIGHLAEECDSDKL-CYNCGQPGHVQSECTLPRTVEHKQCYNCGETGHVKSEC- 62
Query: 95 NDSSKRCYACHQAGHMAKECPGQTAGKSP--EPVVDMSLTCYVCGHQGHLSYDCK 147
S +RC+ C+Q GH++K+C T + P + ++CY CG HL+ DC+
Sbjct: 63 --SVQRCFNCNQTGHISKDC---TEPRKPRAQAAGGRGMSCYKCGGPNHLARDCQ 112
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 25/120 (20%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-----------ES 56
QCYNC + GH + C + C+ CN GH +++C
Sbjct: 48 QCYNCGETGHVKSECSVQR------------CFNCNQTGHISKDCTEPRKPRAQAAGGRG 95
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN-DSSKRCYACHQAGHMAKECP 115
++CY C G H+A+DC + CY+C + GH +R+CP+ K CY C+Q+GH++++CP
Sbjct: 96 MSCYKCGGPNHLARDCQ-QEDTKCYSCGNFGHISRDCPDGPGDKVCYNCNQSGHISRDCP 154
>gi|259484556|tpe|CBF80881.1| TPA: zinc knuckle domain protein (Byr3), putative (AFU_orthologue;
AFUA_1G07630) [Aspergillus nidulans FGSC A4]
Length = 171
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA--------------T 54
CY C GH CPQ + + G CYKC GH AR C+
Sbjct: 51 CYRCGAVGHISRECPQ--AGENERPAGGQECYKCGRVGHIARNCSQGGSYGGGFGGGYGG 108
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS--SKRCYACHQAGHMAK 112
TCY+C G GH+A+DCT CYNC +GH +R+CP ++ + CY C Q GH+
Sbjct: 109 RQQTCYSCGGFGHMARDCTQGQK--CYNCGETGHVSRDCPTEAKGERVCYQCKQPGHIQS 166
Query: 113 ECP 115
CP
Sbjct: 167 ACP 169
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 36 GIVCYKCNNYGHFARECATESV-TCYNCSGQGHVAKDCTV-KSSIICYNCNSSGHFARNC 93
G VC+ C H AR+C + TCYNC GQGHV+++CTV CY C + GH +R C
Sbjct: 5 GRVCFNCGEATHQARDCPKKGTPTCYNCGGQGHVSRECTVAPKEKSCYRCGAVGHISREC 64
Query: 94 PNDSS-------KRCYACHQAGHMAKECP--GQTAGKSPEPVVDMSLTCYVCGHQGHLSY 144
P + CY C + GH+A+ C G G TCY CG GH++
Sbjct: 65 PQAGENERPAGGQECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGGFGHMAR 124
Query: 145 DCKLVQK 151
DC QK
Sbjct: 125 DCTQGQK 131
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 68/166 (40%), Gaps = 44/166 (26%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQG 66
C+NC + H CP+K + CY C GH +REC A + +CY C G
Sbjct: 8 CFNCGEATHQARDCPKKGTP---------TCYNCGGQGHVSRECTVAPKEKSCYRCGAVG 58
Query: 67 HVAKDCT-------VKSSIICYNCNSSGHFARNCPN-------------DSSKRCYACHQ 106
H++++C CY C GH ARNC + CY+C
Sbjct: 59 HISRECPQAGENERPAGGQECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGG 118
Query: 107 AGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
GHMA++C T G+ CY CG GH+S DC K
Sbjct: 119 FGHMARDC---TQGQK----------CYNCGETGHVSRDCPTEAKG 151
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 67/166 (40%), Gaps = 46/166 (27%)
Query: 5 STIQCYNCFDFGHYQYSC---PQKSSADARGDKVGIVCYKCNNYGHFARECATESVT--- 58
T CYNC GH C P++ S CY+C GH +REC
Sbjct: 25 GTPTCYNCGGQGHVSRECTVAPKEKS-----------CYRCGAVGHISRECPQAGENERP 73
Query: 59 -----CYNCSGQGHVAKDCT-------------VKSSIICYNCNSSGHFARNCPNDSSKR 100
CY C GH+A++C+ CY+C GH AR+C ++
Sbjct: 74 AGGQECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGGFGHMARDC--TQGQK 131
Query: 101 CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C + GH++++CP + G+ CY C GH+ C
Sbjct: 132 CYNCGETGHVSRDCPTEAKGE---------RVCYQCKQPGHIQSAC 168
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGI----VCYKCNNYGHFARECATESVTCYNCS 63
+CY C GH +C Q S CY C +GH AR+C T+ CYNC
Sbjct: 78 ECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGGFGHMARDC-TQGQKCYNCG 136
Query: 64 GQGHVAKDC--TVKSSIICYNCNSSGHFARNCPND 96
GHV++DC K +CY C GH CPN+
Sbjct: 137 ETGHVSRDCPTEAKGERVCYQCKQPGHIQSACPNN 171
>gi|50304733|ref|XP_452322.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641455|emb|CAH01173.1| KLLA0C02805p [Kluyveromyces lactis]
Length = 156
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 64/119 (53%), Gaps = 25/119 (21%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-----------ATES 56
QCYNC + GH + C + CY C+ +GH +REC +
Sbjct: 48 QCYNCGETGHVKTECTVQK------------CYNCDGFGHISRECDQPKRFRNNERSGPK 95
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN-DSSKRCYACHQAGHMAKEC 114
V+CY C G H+AKDC +KS CYNC +GH +++C N ++ K CY C+ GH+AK+C
Sbjct: 96 VSCYKCGGPNHIAKDC-LKSEPTCYNCGQAGHLSKDCQNGENEKVCYNCNGVGHIAKDC 153
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 64/155 (41%), Gaps = 44/155 (28%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT----ESVTCYNCSG 64
CY C GH C + +CY CN GH EC E CYNC
Sbjct: 6 CYICGKLGHLASDCDSEK-----------LCYNCNKPGHVQSECTVPKTVEFKQCYNCGE 54
Query: 65 QGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR------------CYACHQAGHMAK 112
GHV +CTV+ CYNC+ GH +R C D KR CY C H+AK
Sbjct: 55 TGHVKTECTVQK---CYNCDGFGHISREC--DQPKRFRNNERSGPKVSCYKCGGPNHIAK 109
Query: 113 ECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+C + TCY CG GHLS DC+
Sbjct: 110 DC------------LKSEPTCYNCGQAGHLSKDCQ 132
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 8/114 (7%)
Query: 36 GIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARN 92
G CY C GH A +C +E + CYNC+ GHV +CTV ++ CYNC +GH
Sbjct: 3 GKACYICGKLGHLASDCDSEKL-CYNCNKPGHVQSECTVPKTVEFKQCYNCGETGHVKTE 61
Query: 93 CPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C + ++CY C GH+++EC ++ E ++CY CG H++ DC
Sbjct: 62 C---TVQKCYNCDGFGHISRECDQPKRFRNNE-RSGPKVSCYKCGGPNHIAKDC 111
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
Query: 1 MSSTSTIQ-CYNCFDFGHYQYSC--PQKSSADAR-GDKVGIVCYKCNNYGHFARECATES 56
+ + T+Q CYNC FGH C P++ + R G KV CYKC H A++C
Sbjct: 58 VKTECTVQKCYNCDGFGHISRECDQPKRFRNNERSGPKVS--CYKCGGPNHIAKDCLKSE 115
Query: 57 VTCYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNC 93
TCYNC GH++KDC ++ +CYNCN GH A++C
Sbjct: 116 PTCYNCGQAGHLSKDCQNGENEKVCYNCNGVGHIAKDC 153
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 64/152 (42%), Gaps = 29/152 (19%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSG 64
S CYNC GH Q C + + + CY C GH EC + CYNC G
Sbjct: 21 SEKLCYNCNKPGHVQSECTVPKTVEFK------QCYNCGETGHVKTECTVQK--CYNCDG 72
Query: 65 QGHVAKDCTVKS----------SIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
GH++++C + CY C H A++C S CY C QAGH++K+C
Sbjct: 73 FGHISRECDQPKRFRNNERSGPKVSCYKCGGPNHIAKDCLK-SEPTCYNCGQAGHLSKDC 131
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
K CY C GH++ DC
Sbjct: 132 QNGENEK----------VCYNCNGVGHIAKDC 153
>gi|260943696|ref|XP_002616146.1| hypothetical protein CLUG_03387 [Clavispora lusitaniae ATCC 42720]
gi|238849795|gb|EEQ39259.1| hypothetical protein CLUG_03387 [Clavispora lusitaniae ATCC 42720]
Length = 171
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 66/133 (49%), Gaps = 30/133 (22%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA--------- 53
+ + QCY C D GH + CP A+G K CY C+ +GH +REC
Sbjct: 44 TAESKQCYLCGDIGHIRGDCPN----SAQGSK----CYNCSEFGHISRECPKNEGAAPAA 95
Query: 54 ---------TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP---NDSSKRC 101
T+S TCY C G H AKDC S+ CY+C SGH ++ C + +K C
Sbjct: 96 PAHKKSGKFTKSPTCYKCGGPNHFAKDCQA-GSVKCYSCGKSGHISKECTLASDKVTKSC 154
Query: 102 YACHQAGHMAKEC 114
Y C Q GH+AK+C
Sbjct: 155 YNCGQTGHIAKDC 167
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 34/160 (21%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQG 66
CYNC GH +CP+ +A+++ CY C + GH +C + + CYNCS G
Sbjct: 26 CYNCRQAGHESSACPEPKTAESK------QCYLCGDIGHIRGDCPNSAQGSKCYNCSEFG 79
Query: 67 HVAKDC-----------------TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
H++++C S CY C HFA++C S K CY+C ++GH
Sbjct: 80 HISRECPKNEGAAPAAPAHKKSGKFTKSPTCYKCGGPNHFAKDCQAGSVK-CYSCGKSGH 138
Query: 110 MAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
++KEC + ++ +CY CG GH++ DC V
Sbjct: 139 ISKECTLASD--------KVTKSCYNCGQTGHIAKDCVPV 170
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARG---DKVG-----IVCYKCNNYGHFARECA 53
+S +CYNC +FGH CP+ A K G CYKC HFA++C
Sbjct: 65 NSAQGSKCYNCSEFGHISRECPKNEGAAPAAPAHKKSGKFTKSPTCYKCGGPNHFAKDCQ 124
Query: 54 TESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNC 93
SV CY+C GH++K+CT+ S + CYNC +GH A++C
Sbjct: 125 AGSVKCYSCGKSGHISKECTLASDKVTKSCYNCGQTGHIAKDC 167
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPN 95
CYKC GH A C + CYNC GH + C S CY C GH +CPN
Sbjct: 6 CYKCGESGHIADNCQQQERLCYNCRQAGHESSACPEPKTAESKQCYLCGDIGHIRGDCPN 65
Query: 96 DS-SKRCYACHQAGHMAKECPGQTAGK------SPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ +CY C + GH+++ECP S TCY CG H + DC+
Sbjct: 66 SAQGSKCYNCSEFGHISRECPKNEGAAPAAPAHKKSGKFTKSPTCYKCGGPNHFAKDCQ 124
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 14/92 (15%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND---SSKRCYACHQAGHMAKEC 114
+CY C GH+A +C + +CYNC +GH + CP SK+CY C GH+ +C
Sbjct: 5 SCYKCGESGHIADNCQQQER-LCYNCRQAGHESSACPEPKTAESKQCYLCGDIGHIRGDC 63
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
P G CY C GH+S +C
Sbjct: 64 PNSAQGS----------KCYNCSEFGHISREC 85
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 12/60 (20%)
Query: 99 KRCYACHQAGHMAKEC------------PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY C ++GH+A C G + PEP S CY+CG GH+ DC
Sbjct: 4 RSCYKCGESGHIADNCQQQERLCYNCRQAGHESSACPEPKTAESKQCYLCGDIGHIRGDC 63
>gi|407917903|gb|EKG11203.1| Zinc finger CCHC-type protein [Macrophomina phaseolina MS6]
Length = 176
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 59/127 (46%), Gaps = 25/127 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC---------------- 52
CY C GH CP+ A G G CYKC GH AR C
Sbjct: 54 CYRCGKVGHLSRECPE---GGAPGMGAGQECYKCGKVGHIARNCNSYGGGFGGGYGGGSG 110
Query: 53 --ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS--KRCYACHQAG 108
TCY+C G GH+++DCT CYNC GH +R+CP+++S + CY C Q G
Sbjct: 111 FGGPRGQTCYSCGGYGHMSRDCT--QGQKCYNCGEVGHLSRDCPSETSNERVCYKCKQPG 168
Query: 109 HMAKECP 115
H+ CP
Sbjct: 169 HVQAACP 175
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 68/140 (48%), Gaps = 20/140 (14%)
Query: 26 SSADARGDKVGIVCYKCNNYGHFARECATE-SVTCYNCSGQGHVAKDC-TVKSSIICYNC 83
S+ ARG CY C + H AR+C T+ + TCYNC QGH+++DC ++ CY C
Sbjct: 4 SAPPARG------CYNCGDTSHQARDCPTKGNPTCYNCGEQGHLSRDCQQPQAEKPCYRC 57
Query: 84 NSSGHFARNCPN------DSSKRCYACHQAGHMAKEC------PGQTAGKSPEPVVDMSL 131
GH +R CP + + CY C + GH+A+ C G G
Sbjct: 58 GKVGHLSRECPEGGAPGMGAGQECYKCGKVGHIARNCNSYGGGFGGGYGGGSGFGGPRGQ 117
Query: 132 TCYVCGHQGHLSYDCKLVQK 151
TCY CG GH+S DC QK
Sbjct: 118 TCYSCGGYGHMSRDCTQGQK 137
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 70/183 (38%), Gaps = 48/183 (26%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKS-------------SADARGDKVGIVCYKCNNYGH 47
S+ CYNC D H CP K S D + + CY+C GH
Sbjct: 3 FSAPPARGCYNCGDTSHQARDCPTKGNPTCYNCGEQGHLSRDCQQPQAEKPCYRCGKVGH 62
Query: 48 FARECATESVT-------CYNCSGQGHVAKDCTV-----------------KSSIICYNC 83
+REC CY C GH+A++C CY+C
Sbjct: 63 LSRECPEGGAPGMGAGQECYKCGKVGHIARNCNSYGGGFGGGYGGGSGFGGPRGQTCYSC 122
Query: 84 NSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLS 143
GH +R+C ++CY C + GH++++CP +T+ + CY C GH+
Sbjct: 123 GGYGHMSRDC--TQGQKCYNCGEVGHLSRDCPSETSNE---------RVCYKCKQPGHVQ 171
Query: 144 YDC 146
C
Sbjct: 172 AAC 174
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Query: 8 QCYNCFDFGHYQYSC--------PQKSSADARGDKVGIVCYKCNNYGHFARECATESVTC 59
+CY C GH +C G G CY C YGH +R+C T+ C
Sbjct: 80 ECYKCGKVGHIARNCNSYGGGFGGGYGGGSGFGGPRGQTCYSCGGYGHMSRDC-TQGQKC 138
Query: 60 YNCSGQGHVAKDCTVKSS--IICYNCNSSGHFARNCPN 95
YNC GH+++DC ++S +CY C GH CPN
Sbjct: 139 YNCGEVGHLSRDCPSETSNERVCYKCKQPGHVQAACPN 176
>gi|365758739|gb|EHN00566.1| Gis2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 153
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 14/113 (12%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCP 94
CY C GH A +C +E + CYNC+ GHV DCT+ ++ CYNC +GH C
Sbjct: 5 ACYVCGKIGHLAEDCDSERL-CYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSEC- 62
Query: 95 NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMS-LTCYVCGHQGHLSYDC 146
+ +RC+ C+Q GH+++ECP P+ S ++CY CG H++ DC
Sbjct: 63 --AVQRCFNCNQTGHISRECP------EPKKATRFSKVSCYKCGGPNHMAKDC 107
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 64/153 (41%), Gaps = 32/153 (20%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TESVTCY 60
S CY C GH C + +CY CN GH +C E CY
Sbjct: 2 SQKACYVCGKIGHLAEDCDSER-----------LCYNCNKPGHVQTDCTMPRTVEFKQCY 50
Query: 61 NCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND------SSKRCYACHQAGHMAKEC 114
NC GHV +C V+ C+NCN +GH +R CP S CY C HMAK+C
Sbjct: 51 NCGETGHVRSECAVQR---CFNCNQTGHISRECPEPKKATRFSKVSCYKCGGPNHMAKDC 107
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ L CY CG GH+S DC+
Sbjct: 108 MKEDGASG--------LKCYTCGQAGHMSRDCQ 132
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 24/117 (20%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-------ESVTCY 60
QCYNC + GH + C + C+ CN GH +REC V+CY
Sbjct: 48 QCYNCGETGHVRSECAVQR------------CFNCNQTGHISRECPEPKKATRFSKVSCY 95
Query: 61 NCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
C G H+AKDC + S + CY C +GH +R+C ND + CY C++ GH++K+C
Sbjct: 96 KCGGPNHMAKDCMKEDGASGLKCYTCGQAGHMSRDCQND--RLCYNCNETGHISKDC 150
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 68/150 (45%), Gaps = 30/150 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH Q C + + + CY C GH ECA + C+NC+ GH+
Sbjct: 25 CYNCNKPGHVQTDCTMPRTVEFK------QCYNCGETGHVRSECAVQR--CFNCNQTGHI 76
Query: 69 AKDC------TVKSSIICYNCNSSGHFARNCPND---SSKRCYACHQAGHMAKECPGQTA 119
+++C T S + CY C H A++C + S +CY C QAGHM+++C
Sbjct: 77 SRECPEPKKATRFSKVSCYKCGGPNHMAKDCMKEDGASGLKCYTCGQAGHMSRDCQN--- 133
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
CY C GH+S DC V
Sbjct: 134 ----------DRLCYNCNETGHISKDCSKV 153
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES----V 57
S + +C+NC GH CP+ A R KV CYKC H A++C E +
Sbjct: 60 SECAVQRCFNCNQTGHISRECPEPKKA-TRFSKVS--CYKCGGPNHMAKDCMKEDGASGL 116
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
CY C GH+++DC ++ +CYNCN +GH +++C
Sbjct: 117 KCYTCGQAGHMSRDC--QNDRLCYNCNETGHISKDC 150
>gi|71747588|ref|XP_822849.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
gi|70832517|gb|EAN78021.1| universal minicircle sequence binding protein (UMSBP), putative
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|261332660|emb|CBH15655.1| predicted zinc finger protein [Trypanosoma brucei gambiense DAL972]
Length = 140
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 59/133 (44%), Gaps = 27/133 (20%)
Query: 38 VCYKCNNYGHFARECATE--------SVTCYNCSGQGHVAKDC-------TVKSSIICYN 82
CY C GH +REC +CYNC H+++DC + CYN
Sbjct: 12 TCYNCGQPGHMSRECPNARSGGNMGGGRSCYNCGQPDHISRDCPNARTGGNMGGGRSCYN 71
Query: 83 CNSSGHFARNCPNDSS-------KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
C GH +R+CPN S + CY C Q GH+A+ECP +P C+
Sbjct: 72 CGRPGHISRDCPNARSGGNMGGGRACYHCQQEGHIARECP-----NAPADAAAGGRACFN 126
Query: 136 CGHQGHLSYDCKL 148
CG GHLS C +
Sbjct: 127 CGQPGHLSRACPV 139
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPNDSS-------KRCYACHQAGHMAKECPGQTAG 120
+A + + ++ CYNC GH +R CPN S + CY C Q H++++CP G
Sbjct: 1 MADNMQMSNARTCYNCGQPGHMSRECPNARSGGNMGGGRSCYNCGQPDHISRDCPNARTG 60
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
+ + +CY CG GH+S DC +
Sbjct: 61 GN----MGGGRSCYNCGRPGHISRDCPNAR 86
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 16/100 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE--------SVTCY 60
CYNC H CP + G G CY C GH +R+C CY
Sbjct: 41 CYNCGQPDHISRDCPNARTGGNMGG--GRSCYNCGRPGHISRDCPNARSGGNMGGGRACY 98
Query: 61 NCSGQGHVAKDC------TVKSSIICYNCNSSGHFARNCP 94
+C +GH+A++C C+NC GH +R CP
Sbjct: 99 HCQQEGHIARECPNAPADAAAGGRACFNCGQPGHLSRACP 138
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-------ATESVTCYN 61
CYNC GH CP S G G CY C GH AREC A C+N
Sbjct: 69 CYNCGRPGHISRDCPNARSGGNMGG--GRACYHCQQEGHIARECPNAPADAAAGGRACFN 126
Query: 62 CSGQGHVAKDCTVK 75
C GH+++ C VK
Sbjct: 127 CGQPGHLSRACPVK 140
>gi|294942030|ref|XP_002783361.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239895776|gb|EER15157.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 135
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 22/151 (14%)
Query: 1 MSSTSTIQ-CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTC 59
M++T+ Q C+ C + GHY +CP++ D+R + CY C H AR+C +
Sbjct: 1 MAATAPSQACFICNETGHYARNCPRQFDDDSRARRRPQNCYNCGQPDHLARDCPKDQ--- 57
Query: 60 YNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP---G 116
+ C+ C GHFAR+CP+ ++ C+ C Q+GH+A+ECP
Sbjct: 58 ---------------SNDRPCFKCQQVGHFARDCPSADTRNCFRCGQSGHLARECPNEEN 102
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ C+ CG GHL+ +C+
Sbjct: 103 NQDNNNNNRGGGGGRNCFHCGKPGHLARNCR 133
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 22/102 (21%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-ESVTCYNCSGQGH 67
CYNC H CP+ S D C+KC GHFAR+C + ++ C+ C GH
Sbjct: 40 CYNCGQPDHLARDCPKDQSNDR-------PCFKCQQVGHFARDCPSADTRNCFRCGQSGH 92
Query: 68 VAKDCTVKSSII--------------CYNCNSSGHFARNCPN 95
+A++C + + C++C GH ARNC N
Sbjct: 93 LARECPNEENNQDNNNNNRGGGGGRNCFHCGKPGHLARNCRN 134
>gi|221222052|gb|ACM09687.1| Cellular nucleic acid-binding protein [Salmo salar]
Length = 140
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKV---GIVCYKCNNYGHFARECATESVTC 59
S+ +C+ C GH+ +CP+ + + CY+C GH AR+C C
Sbjct: 2 EMSSSECFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDAC 61
Query: 60 YNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
YNC GH+++DC + CY+C GH + C +CY C + GH+A +C
Sbjct: 62 YNCHRSGHISRDCDHANEQKCYSCGGFGHIQKLC---DKVKCYRCGEIGHVAVQCS---- 114
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
K+ E + CY CG+ GHL+ +C +
Sbjct: 115 -KASE------VNCYKCGNTGHLAKECTI 136
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES-VTCYNCSGQG 66
+CY+C FGH Q C + + CY+C GH A +C+ S V CY C G
Sbjct: 81 KCYSCGGFGHIQKLCDK------------VKCYRCGEIGHVAVQCSKASEVNCYKCGNTG 128
Query: 67 HVAKDCTVKSS 77
H+AK+CT++++
Sbjct: 129 HLAKECTIEAT 139
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 24/107 (22%)
Query: 56 SVTCYNCSGQGHVAKDC------------TVKSSIICYNCNSSGHFARNCPNDSSKRCYA 103
S C+ C GH K+C + CY C GH AR+C + CY
Sbjct: 5 SSECFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQ-TEDACYN 63
Query: 104 CHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
CH++GH++++C K CY CG GH+ C V+
Sbjct: 64 CHRSGHISRDCDHANEQK-----------CYSCGGFGHIQKLCDKVK 99
>gi|6324074|ref|NP_014144.1| Gis2p [Saccharomyces cerevisiae S288c]
gi|1730843|sp|P53849.1|GIS2_YEAST RecName: Full=Zinc finger protein GIS2
gi|1255963|emb|CAA65489.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1302303|emb|CAA96162.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45269894|gb|AAS56328.1| YNL255C [Saccharomyces cerevisiae]
gi|151944292|gb|EDN62570.1| gig suppressor [Saccharomyces cerevisiae YJM789]
gi|190409228|gb|EDV12493.1| zinc-finger protein GIS2 [Saccharomyces cerevisiae RM11-1a]
gi|256272390|gb|EEU07373.1| Gis2p [Saccharomyces cerevisiae JAY291]
gi|285814410|tpg|DAA10304.1| TPA: Gis2p [Saccharomyces cerevisiae S288c]
gi|323303323|gb|EGA57119.1| Gis2p [Saccharomyces cerevisiae FostersB]
gi|323307479|gb|EGA60750.1| Gis2p [Saccharomyces cerevisiae FostersO]
gi|323335863|gb|EGA77141.1| Gis2p [Saccharomyces cerevisiae Vin13]
gi|349580694|dbj|GAA25853.1| K7_Gis2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297096|gb|EIW08197.1| Gis2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 153
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 62/118 (52%), Gaps = 24/118 (20%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-------ESVTCY 60
QCYNC + GH + C + C+ CN GH +REC V+CY
Sbjct: 48 QCYNCGETGHVRSECTVQR------------CFNCNQTGHISRECPEPKKTSRFSKVSCY 95
Query: 61 NCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
C G H+AKDC + S + CY C +GH +R+C ND + CY C++ GH++K+CP
Sbjct: 96 KCGGPNHMAKDCMKEDGISGLKCYTCGQAGHMSRDCQND--RLCYNCNETGHISKDCP 151
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 14/113 (12%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCP 94
CY C GH A +C +E + CYNC+ GHV DCT+ ++ CYNC +GH C
Sbjct: 5 ACYVCGKIGHLAEDCDSERL-CYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSEC- 62
Query: 95 NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMS-LTCYVCGHQGHLSYDC 146
+ +RC+ C+Q GH+++ECP P+ S ++CY CG H++ DC
Sbjct: 63 --TVQRCFNCNQTGHISRECP------EPKKTSRFSKVSCYKCGGPNHMAKDC 107
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 64/149 (42%), Gaps = 32/149 (21%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TESVTCYNCSG 64
CY C GH C + +CY CN GH +C E CYNC
Sbjct: 6 CYVCGKIGHLAEDCDSER-----------LCYNCNKPGHVQTDCTMPRTVEFKQCYNCGE 54
Query: 65 QGHVAKDCTVKSSIICYNCNSSGHFARNCPND------SSKRCYACHQAGHMAKECPGQT 118
GHV +CTV+ C+NCN +GH +R CP S CY C HMAK+C +
Sbjct: 55 TGHVRSECTVQR---CFNCNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKDCMKED 111
Query: 119 AGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
L CY CG GH+S DC+
Sbjct: 112 GISG--------LKCYTCGQAGHMSRDCQ 132
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 65/147 (44%), Gaps = 30/147 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH Q C + + + CY C GH EC + C+NC+ GH+
Sbjct: 25 CYNCNKPGHVQTDCTMPRTVEFK------QCYNCGETGHVRSECTVQR--CFNCNQTGHI 76
Query: 69 AKDCTVK------SSIICYNCNSSGHFARNCPND---SSKRCYACHQAGHMAKECPGQTA 119
+++C S + CY C H A++C + S +CY C QAGHM+++C
Sbjct: 77 SRECPEPKKTSRFSKVSCYKCGGPNHMAKDCMKEDGISGLKCYTCGQAGHMSRDCQN--- 133
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C GH+S DC
Sbjct: 134 ----------DRLCYNCNETGHISKDC 150
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 1 MSSTSTIQ-CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES--- 56
+ S T+Q C+NC GH CP+ +R KV CYKC H A++C E
Sbjct: 58 VRSECTVQRCFNCNQTGHISRECPEPKKT-SRFSKVS--CYKCGGPNHMAKDCMKEDGIS 114
Query: 57 -VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
+ CY C GH+++DC ++ +CYNCN +GH +++CP
Sbjct: 115 GLKCYTCGQAGHMSRDC--QNDRLCYNCNETGHISKDCP 151
>gi|388515269|gb|AFK45696.1| unknown [Medicago truncatula]
Length = 269
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 22/119 (18%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----- 57
ST ++ C+NC + GH +CP + +C+ C GH AREC+ S+
Sbjct: 86 STKSV-CWNCKESGHMASNCPNEG-----------ICHTCGKTGHRARECSAPSLPPGDL 133
Query: 58 -TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
C+NC QGH+A +CT + + C NC +GH AR+CPND C C+ +GH+A++CP
Sbjct: 134 RLCHNCYKQGHIAAECTNEKA--CNNCRKTGHLARDCPNDPI--CNVCNVSGHLARQCP 188
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 11/117 (9%)
Query: 30 ARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHF 89
+RG +C C GH+A EC +V C+NC GH+A +C+ KS +C+NC SGH
Sbjct: 44 SRGFSRDNLCKNCKRPGHYAGECPNVAV-CHNCGLPGHIASECSTKS--VCWNCKESGHM 100
Query: 90 ARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
A NCPN+ C+ C + GH A+EC + P D+ L C+ C QGH++ +C
Sbjct: 101 ASNCPNEGI--CHTCGKTGHRARECSAPSL-----PPGDLRL-CHNCYKQGHIAAEC 149
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 67/143 (46%), Gaps = 32/143 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NC GHY CP + VC+ C GH A EC+T+SV C+NC GH+
Sbjct: 53 CKNCKRPGHYAGECPNVA-----------VCHNCGLPGHIASECSTKSV-CWNCKESGHM 100
Query: 69 AKDCTVKSSIICYNCNSSGHFARNC-----PNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
A +C + IC+ C +GH AR C P + C+ C++ GH+A EC + A
Sbjct: 101 ASNCPNEG--ICHTCGKTGHRARECSAPSLPPGDLRLCHNCYKQGHIAAECTNEKA---- 154
Query: 124 EPVVDMSLTCYVCGHQGHLSYDC 146
C C GHL+ DC
Sbjct: 155 ---------CNNCRKTGHLARDC 168
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 37 IVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDC 72
+VC C +GH +R+C + C+NC G GH+A +C
Sbjct: 220 VVCRNCQQFGHMSRDCMGPLMICHNCGGCGHLAYEC 255
>gi|317454930|gb|ADV19261.1| putative zinc finger protein-like protein [Helleborus orientalis]
Length = 156
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 67/145 (46%), Gaps = 21/145 (14%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------TCYN 61
C+NC + GH C K +C+ C GH AREC+ + C N
Sbjct: 1 MCWNCKESGHVANQC-----------KNDPICHICGKTGHIARECSGSGLPLHDLRLCNN 49
Query: 62 CSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGK 121
C GH+A CT + + C NC +GH AR CPN+ C C+ AGH+A++CP +
Sbjct: 50 CYKPGHIAAACTNEKA--CNNCRKTGHLARECPNEPV--CNLCNVAGHVARQCPKSSLAS 105
Query: 122 SPEPVVDMSLTCYVCGHQGHLSYDC 146
+ C CG GH+S DC
Sbjct: 106 EITGGPFRDIVCRSCGLPGHISRDC 130
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 24/103 (23%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES------- 56
T+ C NC GH CP + VC CN GH AR+C S
Sbjct: 61 TNEKACNNCRKTGHLARECPNEP-----------VCNLCNVAGHVARQCPKSSLASEITG 109
Query: 57 -----VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
+ C +C GH+++DC + ++C NC GH CP
Sbjct: 110 GPFRDIVCRSCGLPGHISRDCG-GAIVVCNNCGGRGHHPFECP 151
>gi|342888969|gb|EGU88180.1| hypothetical protein FOXB_01318 [Fusarium oxysporum Fo5176]
Length = 223
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 78/206 (37%), Gaps = 73/206 (35%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TES 56
MSS S CY C + GHY C SSA+ +CY C GH + C TE+
Sbjct: 1 MSSLSRRACYKCGNVGHYAEVC---SSAER-------LCYNCKQPGHESNGCPLPRTTEA 50
Query: 57 VTCYNCSGQGHVAKDCTV------KSSIICYNCNSSGHFARNCPND-------------- 96
CY+C G GHV DC +S CYNC GH AR CPN
Sbjct: 51 KQCYHCQGLGHVQADCPTLRLSGTGTSGRCYNCGQPGHLARACPNPVGPTMGRGAPMGRG 110
Query: 97 -----------------------------------SSKRCYACHQAGHMAKECPGQTAGK 121
+ +CYAC + GH++++C G
Sbjct: 111 GFPGGYGRGGFAGGPRPATCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGG- 169
Query: 122 SPEPVVDMSLTCYVCGHQGHLSYDCK 147
P+ TCY CG GH+S DC
Sbjct: 170 ---PLNTAGKTCYQCGEAGHISRDCP 192
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 67/164 (40%), Gaps = 44/164 (26%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA--------- 53
+T QCY+C GH Q CP + G CY C GH AR C
Sbjct: 47 TTEAKQCYHCQGLGHVQADCP---TLRLSGTGTSGRCYNCGQPGHLARACPNPVGPTMGR 103
Query: 54 ---------------------TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARN 92
TCY C G H A+DC ++ + CY C GH +R+
Sbjct: 104 GAPMGRGGFPGGYGRGGFAGGPRPATCYKCGGPNHFARDCQAQA-MKCYACGKLGHISRD 162
Query: 93 CP-------NDSSKRCYACHQAGHMAKECPGQTA---GKSPEPV 126
C N + K CY C +AGH++++CP + A G+ P+ V
Sbjct: 163 CTAPNGGPLNTAGKTCYQCGEAGHISRDCPQKNAPGVGEIPQEV 206
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S CY C + GH+A C + + + CY C Q GH + CP P + CY
Sbjct: 5 SRRACYKCGNVGHYAEVC-SSAERLCYNCKQPGHESNGCP--------LPRTTEAKQCYH 55
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ DC ++ S
Sbjct: 56 CQGLGHVQADCPTLRLS 72
>gi|322697703|gb|EFY89480.1| zinc knuckle domain containing protein [Metarhizium acridum CQMa
102]
Length = 223
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 72/180 (40%), Gaps = 47/180 (26%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---- 58
S+S CYNC GH CP + +A+ CY C GH +C T ++
Sbjct: 23 SSSERLCYNCKQPGHESNGCPLPRTTEAK------QCYHCQGLGHVQADCPTLRLSGSAT 76
Query: 59 ---CYNCSGQGHVAKDCT-----------------------------VKSSIICYNCNSS 86
CYNC GH+A+ C CY C
Sbjct: 77 SGRCYNCGQPGHLARACPNPVGPMGRGAPMGRGGFAGGFAGRGGFSGGPRPATCYKCGGP 136
Query: 87 GHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
HFAR+C + +CYAC + GH++++C G P+ TCY CG GH+S DC
Sbjct: 137 NHFARDC-QAQAMKCYACGKLGHISRDCTAPNGG----PLNTAGKTCYQCGEAGHISRDC 191
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 66/164 (40%), Gaps = 41/164 (25%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA--------- 53
+T QCY+C GH Q CP + G CY C GH AR C
Sbjct: 47 TTEAKQCYHCQGLGHVQADCP---TLRLSGSATSGRCYNCGQPGHLARACPNPVGPMGRG 103
Query: 54 ---------------------TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARN 92
TCY C G H A+DC ++ + CY C GH +R+
Sbjct: 104 APMGRGGFAGGFAGRGGFSGGPRPATCYKCGGPNHFARDCQAQA-MKCYACGKLGHISRD 162
Query: 93 CP-------NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDM 129
C N + K CY C +AGH++++CP + A P VDM
Sbjct: 163 CTAPNGGPLNTAGKTCYQCGEAGHISRDCPQKNASGEIAPEVDM 206
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 59/137 (43%), Gaps = 27/137 (19%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + + CY+C GH +CP
Sbjct: 8 ACYKCGNVGHYAEVCSSSERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQADCP 67
Query: 95 ------NDSSKRCYACHQAGHMAKECP---GQTAGKSP---------------EPVVDMS 130
+ +S RCY C Q GH+A+ CP G +P
Sbjct: 68 TLRLSGSATSGRCYNCGQPGHLARACPNPVGPMGRGAPMGRGGFAGGFAGRGGFSGGPRP 127
Query: 131 LTCYVCGHQGHLSYDCK 147
TCY CG H + DC+
Sbjct: 128 ATCYKCGGPNHFARDCQ 144
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S CY C + GH+A C + S + CY C Q GH + CP P + CY
Sbjct: 5 SRRACYKCGNVGHYAEVC-SSSERLCYNCKQPGHESNGCP--------LPRTTEAKQCYH 55
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ DC ++ S
Sbjct: 56 CQGLGHVQADCPTLRLS 72
>gi|340057210|emb|CCC51552.1| putative universal minicircle sequence binding protein (UMSBP)
[Trypanosoma vivax Y486]
Length = 138
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 63/137 (45%), Gaps = 26/137 (18%)
Query: 31 RGDKVGIVCYKCNNYGHFARECA------TESVTCYNCSGQGHVAKDCTVK------SSI 78
RGD+ CY C GH +REC + CYNC GH+++DC
Sbjct: 8 RGDRS---CYNCGQPGHISRECPGARSGNADGRACYNCGQPGHISRDCPGMRGGSSFGGR 64
Query: 79 ICYNCNSSGHFARNCP-------NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSL 131
CYNC GH +R+CP ++ CY C Q GH+A++CP A + V
Sbjct: 65 SCYNCGKVGHISRDCPTARGAYGGPQTRSCYHCQQEGHIARDCPNAPA----DGAVRGGG 120
Query: 132 TCYVCGHQGHLSYDCKL 148
CY CG GH+S C +
Sbjct: 121 ACYNCGQPGHISRACPV 137
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 60/136 (44%), Gaps = 25/136 (18%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------ 54
M CYNC GH CP S +A G CY C GH +R+C
Sbjct: 5 MQPRGDRSCYNCGQPGHISRECPGARSGNADGR----ACYNCGQPGHISRDCPGMRGGSS 60
Query: 55 -ESVTCYNCSGQGHVAKDCTVKSSII-------CYNCNSSGHFARNCPN---DSSKR--- 100
+CYNC GH+++DC CY+C GH AR+CPN D + R
Sbjct: 61 FGGRSCYNCGKVGHISRDCPTARGAYGGPQTRSCYHCQQEGHIARDCPNAPADGAVRGGG 120
Query: 101 -CYACHQAGHMAKECP 115
CY C Q GH+++ CP
Sbjct: 121 ACYNCGQPGHISRACP 136
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 35/82 (42%), Gaps = 10/82 (12%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---- 57
SS CYNC GH CP ++ A G CY C GH AR+C
Sbjct: 59 SSFGGRSCYNCGKVGHISRDCP--TARGAYGGPQTRSCYHCQQEGHIARDCPNAPADGAV 116
Query: 58 ----TCYNCSGQGHVAKDCTVK 75
CYNC GH+++ C VK
Sbjct: 117 RGGGACYNCGQPGHISRACPVK 138
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 89 FARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
A N + CY C Q GH+++ECPG +G + CY CG GH+S DC
Sbjct: 1 MADNMQPRGDRSCYNCGQPGHISRECPGARSGNA------DGRACYNCGQPGHISRDCPG 54
Query: 149 VQ 150
++
Sbjct: 55 MR 56
>gi|315056357|ref|XP_003177553.1| hypothetical protein MGYG_01625 [Arthroderma gypseum CBS 118893]
gi|311339399|gb|EFQ98601.1| hypothetical protein MGYG_01625 [Arthroderma gypseum CBS 118893]
Length = 472
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 66/146 (45%), Gaps = 18/146 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC GH SC ++ S R V + C C GH AR+C V C NC
Sbjct: 264 KCSNCGQMGHIMKSCKEEHSVVER---VEVKCVNCKQPGHRARDCKEARVDRFACRNCGK 320
Query: 65 QGHVAKDCTVKSS---IICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAG 120
GH + +CT S + C CN GHFA++CP R C C HM K+C
Sbjct: 321 GGHRSNECTEPRSAEGVECKRCNEVGHFAKDCPQGGGSRACRNCGSEDHMVKDC------ 374
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDC 146
+P ++TC+ C GH S DC
Sbjct: 375 --DQPRNMATVTCHNCEEMGHFSRDC 398
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 14/129 (10%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE--SVTC 59
+ C NC GH C + SA+ G+ C +CN GHFA++C S C
Sbjct: 308 ARVDRFACRNCGKGGHRSNECTEPRSAE------GVECKRCNEVGHFAKDCPQGGGSRAC 361
Query: 60 YNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNC--PNDSSK-RCYACHQAGHMAKE 113
NC + H+ KDC +++ C+NC GHF+R+C D SK +C C + GH +
Sbjct: 362 RNCGSEDHMVKDCDQPRNMATVTCHNCEEMGHFSRDCTKKKDWSKVKCSCCGEMGHTIRR 421
Query: 114 CPGQTAGKS 122
CP A ++
Sbjct: 422 CPQAPADEN 430
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Query: 36 GIVCYKCNNYGHFARECATE---SVTCYNCSGQGHVAKDCTVKSSII--CYNCNSSGHFA 90
G C C GHFAREC S C+NC +GH DC C C GH A
Sbjct: 47 GDTCRNCGQAGHFARECPEPRKLSGACFNCGQEGHNKSDCPNPRIFTGTCRICEKEGHPA 106
Query: 91 RNCPNDSSKRCYACHQAGHMAKEC 114
CP+ C C GH EC
Sbjct: 107 AQCPDRPPDICKNCKAEGHKTMEC 130
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 10/88 (11%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSGQ 65
C NC GH+ CP+ K+ C+ C GH +C + TC C +
Sbjct: 50 CRNCGQAGHFARECPEPR-------KLSGACFNCGQEGHNKSDCPNPRIFTGTCRICEKE 102
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNC 93
GH A C + IC NC + GH C
Sbjct: 103 GHPAAQCPDRPPDICKNCKAEGHKTMEC 130
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 58 TCYNCSGQGHVAKDCTV--KSSIICYNCNSSGHFARNCPNDS--SKRCYACHQAGHMAKE 113
TC NC GH A++C K S C+NC GH +CPN + C C + GH A +
Sbjct: 49 TCRNCGQAGHFARECPEPRKLSGACFNCGQEGHNKSDCPNPRIFTGTCRICEKEGHPAAQ 108
Query: 114 CPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
CP + P+ C C +GH + +C +K
Sbjct: 109 CP----DRPPD-------ICKNCKAEGHKTMECTENRK 135
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 9/52 (17%)
Query: 95 NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
N + C C QAGH A+EC PEP +S C+ CG +GH DC
Sbjct: 44 NANGDTCRNCGQAGHFAREC--------PEP-RKLSGACFNCGQEGHNKSDC 86
>gi|322705172|gb|EFY96760.1| zinc knuckle domain containing protein [Metarhizium anisopliae
ARSEF 23]
Length = 223
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 72/180 (40%), Gaps = 47/180 (26%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---- 58
S+S CYNC GH CP + +A+ CY C GH +C T ++
Sbjct: 23 SSSERLCYNCKQPGHESNGCPLPRTTEAK------QCYHCQGLGHVQADCPTLRLSGSAT 76
Query: 59 ---CYNCSGQGHVAKDCT-----------------------------VKSSIICYNCNSS 86
CYNC GH+A+ C CY C
Sbjct: 77 SGRCYNCGQPGHLARACPNPVGPMGRGAPMGRGGFAGGFAGRGGFSGGPRPATCYKCGGP 136
Query: 87 GHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
HFAR+C + +CYAC + GH++++C G P+ TCY CG GH+S DC
Sbjct: 137 NHFARDC-QAQAMKCYACGKLGHISRDCTAPNGG----PLNTAGKTCYQCGEAGHISRDC 191
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 66/164 (40%), Gaps = 41/164 (25%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA--------- 53
+T QCY+C GH Q CP + G CY C GH AR C
Sbjct: 47 TTEAKQCYHCQGLGHVQADCP---TLRLSGSATSGRCYNCGQPGHLARACPNPVGPMGRG 103
Query: 54 ---------------------TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARN 92
TCY C G H A+DC ++ + CY C GH +R+
Sbjct: 104 APMGRGGFAGGFAGRGGFSGGPRPATCYKCGGPNHFARDCQAQA-MKCYACGKLGHISRD 162
Query: 93 CP-------NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDM 129
C N + K CY C +AGH++++CP + A P VDM
Sbjct: 163 CTAPNGGPLNTAGKTCYQCGEAGHISRDCPQKNASGEIAPEVDM 206
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 59/137 (43%), Gaps = 27/137 (19%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + + CY+C GH +CP
Sbjct: 8 ACYKCGNVGHYAEVCSSSERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQADCP 67
Query: 95 ------NDSSKRCYACHQAGHMAKECP---GQTAGKSP---------------EPVVDMS 130
+ +S RCY C Q GH+A+ CP G +P
Sbjct: 68 TLRLSGSATSGRCYNCGQPGHLARACPNPVGPMGRGAPMGRGGFAGGFAGRGGFSGGPRP 127
Query: 131 LTCYVCGHQGHLSYDCK 147
TCY CG H + DC+
Sbjct: 128 ATCYKCGGPNHFARDCQ 144
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S CY C + GH+A C + S + CY C Q GH + CP P + CY
Sbjct: 5 SRRACYKCGNVGHYAEVC-SSSERLCYNCKQPGHESNGCP--------LPRTTEAKQCYH 55
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ DC ++ S
Sbjct: 56 CQGLGHVQADCPTLRLS 72
>gi|408387760|gb|EKJ67470.1| hypothetical protein FPSE_12389 [Fusarium pseudograminearum CS3096]
Length = 180
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 61/127 (48%), Gaps = 26/127 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----------- 57
CY C GH CP G CYKC GH AR C S
Sbjct: 60 CYKCGQPGHISRDCPMSG-----GSGQATECYKCGEIGHIARNCNKSSYGNNYGGGFQQQ 114
Query: 58 -----TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS---KRCYACHQAGH 109
TCY+C G GH++++C + + CYNC SGH++R+CP +S+ K CY C Q GH
Sbjct: 115 GGAGKTCYSCGGFGHMSRECV--NGMKCYNCGESGHYSRDCPKESAGGEKICYKCQQPGH 172
Query: 110 MAKECPG 116
+ +CPG
Sbjct: 173 VQSQCPG 179
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 11/120 (9%)
Query: 38 VCYKCNNYGHFARECATES-VTCYNCSGQGHVAKDCT--VKSSIICYNCNSSGHFARNCP 94
CY C + H AR+C T+ CYNC G+GH+++DCT +K + CY C GH +R+CP
Sbjct: 15 ACYSCGSTAHQARDCPTKGPAKCYNCGGEGHMSRDCTEPMKDNKSCYKCGQPGHISRDCP 74
Query: 95 ----NDSSKRCYACHQAGHMAKECPGQTAGKS----PEPVVDMSLTCYVCGHQGHLSYDC 146
+ + CY C + GH+A+ C + G + + TCY CG GH+S +C
Sbjct: 75 MSGGSGQATECYKCGEIGHIARNCNKSSYGNNYGGGFQQQGGAGKTCYSCGGFGHMSREC 134
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 65/160 (40%), Gaps = 44/160 (27%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT---ESVTCYNCSGQ 65
CY+C H CP K A CY C GH +R+C ++ +CY C
Sbjct: 16 CYSCGSTAHQARDCPTKGPAK---------CYNCGGEGHMSRDCTEPMKDNKSCYKCGQP 66
Query: 66 GHVAKDCTVKS----SIICYNCNSSGHFARNCPNDS---------------SKRCYACHQ 106
GH+++DC + + CY C GH ARNC S K CY+C
Sbjct: 67 GHISRDCPMSGGSGQATECYKCGEIGHIARNCNKSSYGNNYGGGFQQQGGAGKTCYSCGG 126
Query: 107 AGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GHM++EC + CY CG GH S DC
Sbjct: 127 FGHMSRECVN-------------GMKCYNCGESGHYSRDC 153
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 69/164 (42%), Gaps = 37/164 (22%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-----ATESV 57
+ +CYNC GH C + K CYKC GH +R+C + ++
Sbjct: 31 TKGPAKCYNCGGEGHMSRDCTEPM-------KDNKSCYKCGQPGHISRDCPMSGGSGQAT 83
Query: 58 TCYNCSGQGHVAKDCTVKS---------------SIICYNCNSSGHFARNCPNDSSKRCY 102
CY C GH+A++C S CY+C GH +R C N +CY
Sbjct: 84 ECYKCGEIGHIARNCNKSSYGNNYGGGFQQQGGAGKTCYSCGGFGHMSRECVN--GMKCY 141
Query: 103 ACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C ++GH +++CP ++AG CY C GH+ C
Sbjct: 142 NCGESGHYSRDCPKESAGG--------EKICYKCQQPGHVQSQC 177
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSAD------ARGDKVGIVCYKCNNYGHFARECATES 56
S +CY C + GH +C + S + + G CY C +GH +REC
Sbjct: 79 SGQATECYKCGEIGHIARNCNKSSYGNNYGGGFQQQGGAGKTCYSCGGFGHMSRECVN-G 137
Query: 57 VTCYNCSGQGHVAKDCTVKSS---IICYNCNSSGHFARNCPND 96
+ CYNC GH ++DC +S+ ICY C GH CP +
Sbjct: 138 MKCYNCGESGHYSRDCPKESAGGEKICYKCQQPGHVQSQCPGN 180
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
CY+C S+ H AR+CP +CY C GHM+++C EP+ D + +CY CG
Sbjct: 16 CYSCGSTAHQARDCPTKGPAKCYNCGGEGHMSRDCT--------EPMKD-NKSCYKCGQP 66
Query: 140 GHLSYDCKL 148
GH+S DC +
Sbjct: 67 GHISRDCPM 75
>gi|325092526|gb|EGC45836.1| zinc-finger protein GIS2 [Ajellomyces capsulatus H88]
Length = 226
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 71/155 (45%), Gaps = 22/155 (14%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----- 57
+T T QCY+C GH Q CP + G G CY C+ GH AR C + +
Sbjct: 46 TTETKQCYHCQGLGHVQADCP---TLRISGGATGGRCYICHLPGHLARTCPSAGMHGAGR 102
Query: 58 ------TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMA 111
+N + +G A + +CY C HFAR+C + K CYAC + GH++
Sbjct: 103 GAPVIRGGFNSAFRGGFAG---YSRTAMCYKCGGPNHFARDCQAQAMK-CYACGKLGHIS 158
Query: 112 KECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++CP G P+ CY C GH+S DC
Sbjct: 159 RDCPAPNGG----PLSSAGKVCYKCSLAGHISRDC 189
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 57/136 (41%), Gaps = 26/136 (19%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + CY+C GH +CP
Sbjct: 7 ACYKCGNIGHYAEVCSSAERLCYNCKQPGHESNGCPRPRTTETKQCYHCQGLGHVQADCP 66
Query: 95 ------NDSSKRCYACHQAGHMAKECP--GQTAGKSPEPVV---------------DMSL 131
+ RCY CH GH+A+ CP G PV+ +
Sbjct: 67 TLRISGGATGGRCYICHLPGHLARTCPSAGMHGAGRGAPVIRGGFNSAFRGGFAGYSRTA 126
Query: 132 TCYVCGHQGHLSYDCK 147
CY CG H + DC+
Sbjct: 127 MCYKCGGPNHFARDCQ 142
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 26/118 (22%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADA---------------RGDKVG----IVCYKCNNYGHF 48
+CY C GH +CP A RG G +CYKC HF
Sbjct: 78 RCYICHLPGHLARTCPSAGMHGAGRGAPVIRGGFNSAFRGGFAGYSRTAMCYKCGGPNHF 137
Query: 49 ARECATESVTCYNCSGQGHVAKDCTVK-------SSIICYNCNSSGHFARNCPNDSSK 99
AR+C +++ CY C GH+++DC + +CY C+ +GH +R+CP ++++
Sbjct: 138 ARDCQAQAMKCYACGKLGHISRDCPAPNGGPLSSAGKVCYKCSLAGHISRDCPTNTNE 195
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 74 VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTC 133
+ S CY C + GH+A C + + + CY C Q GH + CP P + C
Sbjct: 2 LSSRRACYKCGNIGHYAEVC-SSAERLCYNCKQPGHESNGCP--------RPRTTETKQC 52
Query: 134 YVCGHQGHLSYDCKLVQKS 152
Y C GH+ DC ++ S
Sbjct: 53 YHCQGLGHVQADCPTLRIS 71
>gi|1841864|gb|AAB47542.1| nucleic acid binding protein [Trypanosoma equiperdum]
Length = 270
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 66/174 (37%), Gaps = 32/174 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------------ES 56
CY C H CP G G CY C GHF+REC
Sbjct: 45 CYTCGQPDHLSRDCPSNRGTAPMGG--GRACYNCGQPGHFSRECPNMRGGPMGGAPMGGG 102
Query: 57 VTCYNCSGQGHVAKDCT-----------VKSSIICYNCNSSGHFARNCPN------DSSK 99
CYNC GH +++C + CY+C GHF+R CPN +
Sbjct: 103 RACYNCVQPGHFSRECPNMRGGPMGGAPMGGGRACYHCGQPGHFSRECPNMRGANMGGGR 162
Query: 100 RCYACHQAGHMAKECP-GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
CY C Q GH+A ECP + CY CG GHLS C + ++
Sbjct: 163 ECYQCRQEGHIASECPNAPDDAAAGGTAAGGGRACYKCGQPGHLSRACPVTIRT 216
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 65/151 (43%), Gaps = 24/151 (15%)
Query: 24 QKSSADARGDKVGIVCYKCNNYGHFAREC------ATESVTCYNCSGQGHVAKDCT---- 73
+ S+A + G C++C GHFAREC A CY C H+++DC
Sbjct: 4 EASTAKRHRAEGGNNCHRCGQPGHFARECPNVPPGAMGDRACYTCGQPDHLSRDCPSNRG 63
Query: 74 ---VKSSIICYNCNSSGHFARNCPN-----------DSSKRCYACHQAGHMAKECPGQTA 119
+ CYNC GHF+R CPN + CY C Q GH ++ECP
Sbjct: 64 TAPMGGGRACYNCGQPGHFSRECPNMRGGPMGGAPMGGGRACYNCVQPGHFSRECPNMRG 123
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
G + CY CG GH S +C ++
Sbjct: 124 GPMGGAPMGGGRACYHCGQPGHFSRECPNMR 154
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 68/168 (40%), Gaps = 39/168 (23%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT--------CY 60
C+ C GH+ CP A GD+ CY C H +R+C + T CY
Sbjct: 19 CHRCGQPGHFARECPNVPPG-AMGDR---ACYTCGQPDHLSRDCPSNRGTAPMGGGRACY 74
Query: 61 NCSGQGHVAKDCT-----------VKSSIICYNCNSSGHFARNCPN-----------DSS 98
NC GH +++C + CYNC GHF+R CPN
Sbjct: 75 NCGQPGHFSRECPNMRGGPMGGAPMGGGRACYNCVQPGHFSRECPNMRGGPMGGAPMGGG 134
Query: 99 KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY C Q GH ++ECP + CY C +GH++ +C
Sbjct: 135 RACYHCGQPGHFSRECPNMRGAN-----MGGGRECYQCRQEGHIASEC 177
>gi|355679967|gb|AER96442.1| CCHC-type zinc finger, nucleic acid binding protein [Mustela
putorius furo]
Length = 162
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 37/165 (22%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADA-------------RG-----DKVGIVCYKCNNYG 46
S+ +C+ C GH+ CP RG + +CY+C G
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESG 61
Query: 47 HFARECATES--VTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRC 101
H A++C + CYNC GH+AKDC + CYNC GH AR+C + ++C
Sbjct: 62 HLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKC 121
Query: 102 YACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
Y+C + GH+ K+C + CY CG GH++ +C
Sbjct: 122 YSCGEFGHIQKDC--------------TKVKCYGCGETGHVAINC 152
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQGH 67
CYNC GH C + + CY C GH AR+C + CY+C GH
Sbjct: 76 CYNCGRGGHIAKDCKEPKREREQ------CCYNCGKPGHLARDCDHADEQKCYSCGEFGH 129
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCY 102
+ KDCT + CY C +GH A NC S CY
Sbjct: 130 IQKDCT---KVKCYGCGETGHVAINCSKTSEVNCY 161
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 37/104 (35%)
Query: 76 SSIICYNCNSSGHFARNCPND---------------SSKR------------CYACHQAG 108
SS C+ C SGH+AR CP +S R CY C ++G
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESG 61
Query: 109 HMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
H+AK+C Q ++ CY CG GH++ DCK ++
Sbjct: 62 HLAKDCDLQEDVEA----------CYNCGRGGHIAKDCKEPKRE 95
>gi|254584670|ref|XP_002497903.1| ZYRO0F16148p [Zygosaccharomyces rouxii]
gi|186703710|emb|CAQ43401.1| Zinc finger protein GIS2 [Zygosaccharomyces rouxii]
gi|238940796|emb|CAR28970.1| ZYRO0F16148p [Zygosaccharomyces rouxii]
Length = 161
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 23/122 (18%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCP 94
CY C GH A EC +E + CYNC+ GHV +CT+ ++ CYNC +GH C
Sbjct: 5 ACYVCGKIGHLAEECDSERL-CYNCNKPGHVQSECTLPRTVEFKQCYNCGETGHVKTEC- 62
Query: 95 NDSSKRCYACHQAGHMAKECP----------GQTAGKSPEPVVDMSLTCYVCGHQGHLSY 144
+ +RCY C+Q GH+++ECP G G P+ ++CY CG H++
Sbjct: 63 --TVQRCYNCNQTGHISRECPEPKKSRFASAGAPTGGKPK------VSCYRCGGPNHMAK 114
Query: 145 DC 146
DC
Sbjct: 115 DC 116
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 63/161 (39%), Gaps = 45/161 (27%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTCY 60
S CY C GH C + +CY CN GH EC E CY
Sbjct: 2 SQKACYVCGKIGHLAEECDSER-----------LCYNCNKPGHVQSECTLPRTVEFKQCY 50
Query: 61 NCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---------------CYACH 105
NC GHV +CTV+ CYNCN +GH +R CP R CY C
Sbjct: 51 NCGETGHVKTECTVQR---CYNCNQTGHISRECPEPKKSRFASAGAPTGGKPKVSCYRCG 107
Query: 106 QAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
HMAK+C + CY CG GHLS +C
Sbjct: 108 GPNHMAKDC------------LQSGSKCYSCGKFGHLSKEC 136
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 67/156 (42%), Gaps = 34/156 (21%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH Q C + + + CY C GH EC + CYNC+ GH+
Sbjct: 25 CYNCNKPGHVQSECTLPRTVEFK------QCYNCGETGHVKTECTVQR--CYNCNQTGHI 76
Query: 69 AKDCTV---------------KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKE 113
+++C K + CY C H A++C SK CY+C + GH++KE
Sbjct: 77 SRECPEPKKSRFASAGAPTGGKPKVSCYRCGGPNHMAKDCLQSGSK-CYSCGKFGHLSKE 135
Query: 114 CPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
CP K CY C GH+S DC +
Sbjct: 136 CPSGPGEK----------ICYNCNGSGHISKDCPVA 161
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 62/125 (49%), Gaps = 30/125 (24%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--------------- 52
QCYNC + GH + C + CY CN GH +REC
Sbjct: 48 QCYNCGETGHVKTECTVQR------------CYNCNQTGHISRECPEPKKSRFASAGAPT 95
Query: 53 -ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHM 110
V+CY C G H+AKDC ++S CY+C GH ++ CP+ ++ CY C+ +GH+
Sbjct: 96 GGKPKVSCYRCGGPNHMAKDC-LQSGSKCYSCGKFGHLSKECPSGPGEKICYNCNGSGHI 154
Query: 111 AKECP 115
+K+CP
Sbjct: 155 SKDCP 159
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 6 TIQ-CYNCFDFGHYQYSCPQK------SSADARGDKVGIVCYKCNNYGHFARECATESVT 58
T+Q CYNC GH CP+ S+ G K + CY+C H A++C
Sbjct: 63 TVQRCYNCNQTGHISRECPEPKKSRFASAGAPTGGKPKVSCYRCGGPNHMAKDCLQSGSK 122
Query: 59 CYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNCP 94
CY+C GH++K+C + ICYNCN SGH +++CP
Sbjct: 123 CYSCGKFGHLSKECPSGPGEKICYNCNGSGHISKDCP 159
>gi|19114592|ref|NP_593680.1| zinc finger protein Byr3 [Schizosaccharomyces pombe 972h-]
gi|543908|sp|P36627.1|BYR3_SCHPO RecName: Full=Cellular nucleic acid-binding protein homolog
gi|254734|gb|AAB23116.1| human cellular nucleic acid binding protein (CNBP) homolog
[Schizosaccharomyces pombe]
gi|1204164|emb|CAA93542.1| zinc finger protein Byr3 [Schizosaccharomyces pombe]
Length = 179
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 11/126 (8%)
Query: 34 KVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARN 92
+ G CY C GH AREC S+ CYNC+ GH A +CT + CY C ++GH R+
Sbjct: 14 RPGPRCYNCGENGHQARECTKGSI-CYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRD 72
Query: 93 CPNDSSKR----CYACHQAGHMAKECPG---QTAGKSPEPVVDMSLTCYVCGHQGHLSYD 145
CP+ + R CY C + GH+A++C Q+ G+ +M+ CY CG GH + D
Sbjct: 73 CPSSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMN--CYACGSYGHQARD 130
Query: 146 CKLVQK 151
C + K
Sbjct: 131 CTMGVK 136
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 68/158 (43%), Gaps = 42/158 (26%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT--ESVTCYNCSGQ 65
+CYNC + GH C + G +CY CN GH A EC + TCY C
Sbjct: 18 RCYNCGENGHQARECTK-----------GSICYNCNQTGHKASECTEPQQEKTCYACGTA 66
Query: 66 GHVAKDC----TVKSSIICYNCNSSGHFARNCPND------------SSKRCYACHQAGH 109
GH+ +DC + CY C GH AR+C + S+ CYAC GH
Sbjct: 67 GHLVRDCPSSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGH 126
Query: 110 MAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
A++C M + CY CG GH S++C+
Sbjct: 127 QARDC-------------TMGVKCYSCGKIGHRSFECQ 151
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 65/155 (41%), Gaps = 37/155 (23%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-----ESVTCYNCS 63
CYNC GH C + CY C GH R+C + + CY C
Sbjct: 38 CYNCNQTGHKASECTEPQQEK--------TCYACGTAGHLVRDCPSSPNPRQGAECYKCG 89
Query: 64 GQGHVAKDCTV------------KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMA 111
GH+A+DC +S++ CY C S GH AR+C +CY+C + GH +
Sbjct: 90 RVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDC--TMGVKCYSCGKIGHRS 147
Query: 112 KECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
EC + G+ CY C GH++ +C
Sbjct: 148 FECQQASDGQ----------LCYKCNQPGHIAVNC 172
Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 13/71 (18%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNC 62
S + CY C +GH AR +G+ CY C GH + EC A++ CY C
Sbjct: 114 SNMNCYACGSYGH-----------QARDCTMGVKCYSCGKIGHRSFECQQASDGQLCYKC 162
Query: 63 SGQGHVAKDCT 73
+ GH+A +CT
Sbjct: 163 NQPGHIAVNCT 173
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 8/54 (14%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV 57
T ++CY+C GH + C Q S G +CYKCN GH A C + +
Sbjct: 132 TMGVKCYSCGKIGHRSFECQQASD--------GQLCYKCNQPGHIAVNCTSPVI 177
>gi|402910570|ref|XP_003917942.1| PREDICTED: zinc finger CCHC domain-containing protein 13-like
[Papio anubis]
Length = 170
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 10/122 (8%)
Query: 35 VGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFAR 91
+ CY+C +GH A+ C CYNC GH+AKDC + + CY C GH A
Sbjct: 43 LSYTCYRCGEFGHHAKNCVLLGNICYNCGRSGHIAKDCKEPKRERNQHCYTCGRLGHLAY 102
Query: 92 NCPNDSSKRCYACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSY 144
+C ++CY+C + GH+ K+C G+T + + CY CG GHL+
Sbjct: 103 DCDRQKEQKCYSCGKLGHIQKDCAQVKCYRCGETGHVAINCSKASQVNCYRCGESGHLAR 162
Query: 145 DC 146
+C
Sbjct: 163 EC 164
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 18/132 (13%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIV--------------CYKCNNYGH 47
S+T + CY C +FGH+ +C + + G + CY C GH
Sbjct: 40 STTLSYTCYRCGEFGHHAKNCVLLGNICYNCGRSGHIAKDCKEPKRERNQHCYTCGRLGH 99
Query: 48 FARECATE-SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQ 106
A +C + CY+C GH+ KDC + + CY C +GH A NC S CY C +
Sbjct: 100 LAYDCDRQKEQKCYSCGKLGHIQKDC---AQVKCYRCGETGHVAINCSKASQVNCYRCGE 156
Query: 107 AGHMAKECPGQT 118
+GH+A+ECP +
Sbjct: 157 SGHLARECPSEA 168
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CY C GH Y C ++ CY C GH ++CA V CY C GHV
Sbjct: 91 CYTCGRLGHLAYDCDRQKEQK---------CYSCGKLGHIQKDCA--QVKCYRCGETGHV 139
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
A +C+ S + CY C SGH AR CP++++
Sbjct: 140 AINCSKASQVNCYRCGESGHLARECPSEAT 169
>gi|361124091|gb|EHK96212.1| putative ATP-dependent RNA helicase glh-4 [Glarea lozoyensis 74030]
Length = 452
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 23/151 (15%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC GH CP++ + DK+ + C+ C+ GH R+C V C NC
Sbjct: 225 KCSNCDQLGHTFKGCPEEKQE--KTDKIVVSCFNCSEVGHRMRDCPVPRVDKFACRNCKA 282
Query: 65 QGHVAKDCTVKSS---IICYNCNSSGHFARNCPNDSSKR----CYACHQAGHMAKECPGQ 117
GH +K+CT S + C CN +GHFA++CP C+ C + GH ++C +
Sbjct: 283 SGHSSKECTEPRSAEGVECKKCNETGHFAKDCPQGGGGGGGGACHNCGEEGHRKQDCTNE 342
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+ C C GH+ DC L
Sbjct: 343 -----------KKVQCRNCDEFGHVGRDCPL 362
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 64/150 (42%), Gaps = 23/150 (15%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTCYN 61
+ C+NC + GH CP R DK C C GH ++EC + E V C
Sbjct: 251 VVSCFNCSEVGHRMRDCPV-----PRVDK--FACRNCKASGHSSKECTEPRSAEGVECKK 303
Query: 62 CSGQGHVAKDC----TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
C+ GH AKDC C+NC GH ++C N+ +C C + GH+ ++CP
Sbjct: 304 CNETGHFAKDCPQGGGGGGGGACHNCGEEGHRKQDCTNEKKVQCRNCDEFGHVGRDCPL- 362
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
P +TC C GH CK
Sbjct: 363 -------PRDYSRVTCTNCQKTGHTKVRCK 385
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE-SVTCYN 61
S ++C C + GH+ CPQ G C+ C GH ++C E V C N
Sbjct: 295 SAEGVECKKCNETGHFAKDCPQGGGG-----GGGGACHNCGEEGHRKQDCTNEKKVQCRN 349
Query: 62 CSGQGHVAKDCTVK---SSIICYNCNSSGHFARNC 93
C GHV +DC + S + C NC +GH C
Sbjct: 350 CDEFGHVGRDCPLPRDYSRVTCTNCQKTGHTKVRC 384
>gi|345561223|gb|EGX44319.1| hypothetical protein AOL_s00193g47 [Arthrobotrys oligospora ATCC
24927]
Length = 180
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 66/143 (46%), Gaps = 9/143 (6%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCS 63
+T QCY+C GH Q CP + G CY C GH AR C + +
Sbjct: 8 TTKQCYHCQGLGHVQADCP---TLRINGGATSGRCYSCGQPGHLARNCPGNQRFQGGGFN 64
Query: 64 GQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
G+ ++ + CY C H+AR+C + K CYAC + GH++++C G
Sbjct: 65 GRNNMRGYASAPRPATCYKCGGPNHYARDCQAQAMK-CYACGKLGHISRDCTAPNGG--- 120
Query: 124 EPVVDMSLTCYVCGHQGHLSYDC 146
P+ TCY CG GH+S DC
Sbjct: 121 -PLNTAGKTCYRCGEAGHISRDC 142
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 19/110 (17%)
Query: 8 QCYNCFDFGHYQYSCP-----QKSSADARGDKVG-------IVCYKCNNYGHFARECATE 55
+CY+C GH +CP Q + R + G CYKC H+AR+C +
Sbjct: 38 RCYSCGQPGHLARNCPGNQRFQGGGFNGRNNMRGYASAPRPATCYKCGGPNHYARDCQAQ 97
Query: 56 SVTCYNCSGQGHVAKDCTVK-------SSIICYNCNSSGHFARNCPNDSS 98
++ CY C GH+++DCT + CY C +GH +R+CP +++
Sbjct: 98 AMKCYACGKLGHISRDCTAPNGGPLNTAGKTCYRCGEAGHISRDCPQNAT 147
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 36/108 (33%)
Query: 75 KSSIICYNCNSSGHFARNCP------NDSSKRCYACHQAGHMAKECPG----QTAG---- 120
+++ CY+C GH +CP +S RCY+C Q GH+A+ CPG Q G
Sbjct: 7 QTTKQCYHCQGLGHVQADCPTLRINGGATSGRCYSCGQPGHLARNCPGNQRFQGGGFNGR 66
Query: 121 -------KSPEPVV---------------DMSLTCYVCGHQGHLSYDC 146
+P P ++ CY CG GH+S DC
Sbjct: 67 NNMRGYASAPRPATCYKCGGPNHYARDCQAQAMKCYACGKLGHISRDC 114
>gi|45199165|ref|NP_986194.1| AFR646Wp [Ashbya gossypii ATCC 10895]
gi|44985305|gb|AAS54018.1| AFR646Wp [Ashbya gossypii ATCC 10895]
gi|374109427|gb|AEY98333.1| FAFR646Wp [Ashbya gossypii FDAG1]
Length = 163
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 73/157 (46%), Gaps = 36/157 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH Q C SA+ + CY C GH EC + C+NCS GHV
Sbjct: 25 CYNCNMPGHIQSECTLPRSAEHK------QCYNCGETGHVRGECNIQK--CFNCSQAGHV 76
Query: 69 AKDCTVK-----------------SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMA 111
++DCT + + CY C H A++C D +K CY+C ++GH++
Sbjct: 77 SRDCTEPRRSRFSNSSRSSFSGRLNKVSCYRCGGPNHMAKDCLQDETK-CYSCGKSGHIS 135
Query: 112 KECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
++CP + K TCY C GH+S DC +
Sbjct: 136 RDCPSGPSEK----------TCYNCNESGHISRDCPV 162
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 32/127 (25%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-------------- 53
QCYNC + GH RG+ C+ C+ GH +R+C
Sbjct: 48 QCYNCGETGH------------VRGECNIQKCFNCSQAGHVSRDCTEPRRSRFSNSSRSS 95
Query: 54 ----TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN-DSSKRCYACHQAG 108
V+CY C G H+AKDC ++ CY+C SGH +R+CP+ S K CY C+++G
Sbjct: 96 FSGRLNKVSCYRCGGPNHMAKDC-LQDETKCYSCGKSGHISRDCPSGPSEKTCYNCNESG 154
Query: 109 HMAKECP 115
H++++CP
Sbjct: 155 HISRDCP 161
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 13/118 (11%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCP 94
CY C GH A C +E + CYNC+ GH+ +CT+ S CYNC +GH C
Sbjct: 5 ACYVCGKLGHLADNCDSERL-CYNCNMPGHIQSECTLPRSAEHKQCYNCGETGHVRGEC- 62
Query: 95 NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDM------SLTCYVCGHQGHLSYDC 146
+ ++C+ C QAGH++++C + ++CY CG H++ DC
Sbjct: 63 --NIQKCFNCSQAGHVSRDCTEPRRSRFSNSSRSSFSGRLNKVSCYRCGGPNHMAKDC 118
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 12/72 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT--ESVTCYNC 62
+ + CY C H C Q + CY C GH +R+C + TCYNC
Sbjct: 101 NKVSCYRCGGPNHMAKDCLQDETK----------CYSCGKSGHISRDCPSGPSEKTCYNC 150
Query: 63 SGQGHVAKDCTV 74
+ GH+++DC V
Sbjct: 151 NESGHISRDCPV 162
>gi|354492644|ref|XP_003508457.1| PREDICTED: cellular nucleic acid-binding protein-like [Cricetulus
griseus]
Length = 172
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 74/167 (44%), Gaps = 23/167 (13%)
Query: 5 STIQCYNCFDFGHYQYSCP----QKSSADARGDKVGIV-------CYKCNNYGHFAREC- 52
S+ +C+ C GH+ CP + +RG V CY C H A++C
Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGHGMRSRGRGFQFVFSSLPDICYNCGESDHLAKDCD 61
Query: 53 ATESVTCYNCSGQGHVAKDCT----VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAG 108
E CYNC G +AKDC + CYN GH AR+C + ++CY+C + G
Sbjct: 62 LQEGDACYNCGRGGLIAKDCKEPKREREQCCCYNFGKPGHLARDCDHADEQKCYSCSEFG 121
Query: 109 HMAKECPGQTAGKSPEP-------VVDMSLTCYVCGHQGHLSYDCKL 148
H+ K+C + EP + CY CG GHL+ +C +
Sbjct: 122 HIQKDCTSVKCYRCGEPGHVATNCSKTSEVNCYRCGESGHLAQECTI 168
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQGH 67
CYNC G C + + ++ CY GH AR+C + CY+CS GH
Sbjct: 68 CYNCGRGGLIAKDCKE-----PKREREQCCCYNFGKPGHLARDCDHADEQKCYSCSEFGH 122
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ KDCT S+ CY C GH A NC S CY C ++GH+A+EC +T
Sbjct: 123 IQKDCT---SVKCYRCGEPGHVATNCSKTSEVNCYRCGESGHLAQECTIETT 171
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + CY+C GH A C+ T V CY C G
Sbjct: 113 KCYSCSEFGHIQKDC------------TSVKCYRCGEPGHVATNCSKTSEVNCYRCGESG 160
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 161 HLAQECTIETT 171
>gi|156065797|ref|XP_001598820.1| hypothetical protein SS1G_00909 [Sclerotinia sclerotiorum 1980]
gi|154691768|gb|EDN91506.1| hypothetical protein SS1G_00909 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 502
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 68/151 (45%), Gaps = 32/151 (21%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQK---------------SSADARGDK--VGIVCYKCNN 44
S +QC+NC + GH CP SS D G + G+ C KCN
Sbjct: 310 SERVQVQCFNCSEIGHRVRDCPIPREDKFACRNCKKSGHSSKDCTGPRSAEGVECKKCNE 369
Query: 45 YGHFARECATESV----TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND---S 97
GHF+R+C T C NC+ GH +K+CT + IIC NC++ GH + CP S
Sbjct: 370 IGHFSRDCPTGGGGDGGVCRNCNQPGHHSKECTNERVIICRNCDAEGHTGKECPKPRDYS 429
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVD 128
+C C Q GH C EP+V+
Sbjct: 430 RVQCQNCKQMGHTKVRC--------KEPIVE 452
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 67/161 (41%), Gaps = 25/161 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT---ESVTCYNCSGQ 65
C C + GH C Q+ R V + C+ C+ GH R+C + C NC
Sbjct: 290 CSRCSELGHISKHCTQEVGESER---VQVQCFNCSEIGHRVRDCPIPREDKFACRNCKKS 346
Query: 66 GHVAKDCTVKSS---IICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKEC----- 114
GH +KDCT S + C CN GHF+R+CP C C+Q GH +KEC
Sbjct: 347 GHSSKDCTGPRSAEGVECKKCNEIGHFSRDCPTGGGGDGGVCRNCNQPGHHSKECTNERV 406
Query: 115 --------PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
G T + P+P + C C GH CK
Sbjct: 407 IICRNCDAEGHTGKECPKPRDYSRVQCQNCKQMGHTKVRCK 447
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 25/139 (17%)
Query: 33 DKVGIVCYKCNNYGHFARECATE-------SVTCYNCSGQGHVAKDCTV--KSSIICYNC 83
D+ +C +C+ GH ++ C E V C+NCS GH +DC + + C NC
Sbjct: 284 DRGVPLCSRCSELGHISKHCTQEVGESERVQVQCFNCSEIGHRVRDCPIPREDKFACRNC 343
Query: 84 NSSGHFARNCPNDSSK---RCYACHQAGHMAKECP-------------GQTAGKSPEPVV 127
SGH +++C S C C++ GH +++CP Q S E
Sbjct: 344 KKSGHSSKDCTGPRSAEGVECKKCNEIGHFSRDCPTGGGGDGGVCRNCNQPGHHSKECTN 403
Query: 128 DMSLTCYVCGHQGHLSYDC 146
+ + C C +GH +C
Sbjct: 404 ERVIICRNCDAEGHTGKEC 422
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 38/93 (40%), Gaps = 14/93 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------TCYNC 62
C+NC GH + CP+ A C+ C+ GH EC +V TC C
Sbjct: 73 CFNCGQEGHSKAECPEPPKARP--------CFNCSEEGHTKAECTNPAVPREFSGTCRIC 124
Query: 63 SGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
QGH A DC +C NC GH C N
Sbjct: 125 EQQGHRASDCPSAPPKLCNNCKEEGHSILECKN 157
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 38 VCYKCNNYGHFARECAT--ESVTCYNCSGQGHVAKDCTVKS-----SIICYNCNSSGHFA 90
C+ C GH EC ++ C+NCS +GH +CT + S C C GH A
Sbjct: 72 ACFNCGQEGHSKAECPEPPKARPCFNCSEEGHTKAECTNPAVPREFSGTCRICEQQGHRA 131
Query: 91 RNCPNDSSKRCYACHQAGHMAKEC 114
+CP+ K C C + GH EC
Sbjct: 132 SDCPSAPPKLCNNCKEEGHSILEC 155
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 59 CYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNCPNDSSKR-----CYACHQAGHMAK 112
C+NC +GH +C + C+NC+ GH C N + R C C Q GH A
Sbjct: 73 CFNCGQEGHSKAECPEPPKARPCFNCSEEGHTKAECTNPAVPREFSGTCRICEQQGHRAS 132
Query: 113 ECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
+CP S P + C C +GH +CK +K
Sbjct: 133 DCP------SAPPKL-----CNNCKEEGHSILECKNPRK 160
>gi|354544631|emb|CCE41356.1| hypothetical protein CPAR2_303450 [Candida parapsilosis]
Length = 180
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 71/162 (43%), Gaps = 36/162 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES--VTCYNCSGQG 66
CYNC GH CP+ A ++ CY C + GH EC ++ CYNC G
Sbjct: 29 CYNCRKPGHESGDCPEPKQATSK------QCYSCGDVGHIQSECPNQAQGAKCYNCGQFG 82
Query: 67 HVAKDCTVK----------------------SSIICYNCNSSGHFARNCPNDSSKRCYAC 104
H++KDC S CY C HFAR+C + +CYAC
Sbjct: 83 HISKDCDQPPSGQAPPFRKSFGGSRGGGHSASGTTCYKCGGPNHFARDC-QAGTVKCYAC 141
Query: 105 HQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ GH++K+C G + + TCY CG GH+S +C
Sbjct: 142 GKPGHISKDCHSAAGGSN-----VAAKTCYNCGKSGHISREC 178
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 58/126 (46%), Gaps = 15/126 (11%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCP 94
CYKC GH A +C E CYNC GH + DC +S CY+C GH CP
Sbjct: 8 TCYKCGEAGHVADDCTQEERLCYNCRKPGHESGDCPEPKQATSKQCYSCGDVGHIQSECP 67
Query: 95 NDS-SKRCYACHQAGHMAKECPGQTAGKSPEPVVDM-----------SLTCYVCGHQGHL 142
N + +CY C Q GH++K+C +G++P TCY CG H
Sbjct: 68 NQAQGAKCYNCGQFGHISKDCDQPPSGQAPPFRKSFGGSRGGGHSASGTTCYKCGGPNHF 127
Query: 143 SYDCKL 148
+ DC+
Sbjct: 128 ARDCQA 133
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 38/140 (27%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----------- 52
++ QCY+C D GH Q CP ++ G CY C +GH +++C
Sbjct: 48 ATSKQCYSCGDVGHIQSECPNQAQ--------GAKCYNCGQFGHISKDCDQPPSGQAPPF 99
Query: 53 ------------ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC------P 94
+ TCY C G H A+DC ++ CY C GH +++C
Sbjct: 100 RKSFGGSRGGGHSASGTTCYKCGGPNHFARDCQA-GTVKCYACGKPGHISKDCHSAAGGS 158
Query: 95 NDSSKRCYACHQAGHMAKEC 114
N ++K CY C ++GH+++EC
Sbjct: 159 NVAAKTCYNCGKSGHISREC 178
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 12/60 (20%)
Query: 99 KRCYACHQAGHMAKEC------------PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY C +AGH+A +C PG +G PEP S CY CG GH+ +C
Sbjct: 7 RTCYKCGEAGHVADDCTQEERLCYNCRKPGHESGDCPEPKQATSKQCYSCGDVGHIQSEC 66
>gi|10185395|emb|CAC08539.1| CCHC zinc finger protein [Trypanosoma brucei]
Length = 140
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 27/133 (20%)
Query: 38 VCYKCNNYGHFARECATE--------SVTCYNCSGQGHVAKDC-------TVKSSIICYN 82
CY C + GH +REC +CYNC H+++DC + CYN
Sbjct: 12 TCYNCGHAGHMSRECPNARSGGNMGGGRSCYNCGQPDHISRDCPNARTGGNMGGGRSCYN 71
Query: 83 CNSSGHFARNCPNDSS-------KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
C GH +R+CPN S + CY C Q GH+A+ECP +P C+
Sbjct: 72 CGRPGHISRDCPNARSGGNMGGGRACYHCQQEGHIARECP-----NAPLDAAAGGRACFN 126
Query: 136 CGHQGHLSYDCKL 148
CG GHLS C +
Sbjct: 127 CGQPGHLSRACPV 139
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPNDSS-------KRCYACHQAGHMAKECPGQTAG 120
+A + + ++ CYNC +GH +R CPN S + CY C Q H++++CP G
Sbjct: 1 MADNMQMSNARTCYNCGHAGHMSRECPNARSGGNMGGGRSCYNCGQPDHISRDCPNARTG 60
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
+ + +CY CG GH+S DC +
Sbjct: 61 GN----MGGGRSCYNCGRPGHISRDCPNAR 86
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 16/100 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE--------SVTCY 60
CYNC H CP + G G CY C GH +R+C CY
Sbjct: 41 CYNCGQPDHISRDCPNARTGGNMGG--GRSCYNCGRPGHISRDCPNARSGGNMGGGRACY 98
Query: 61 NCSGQGHVAKDC------TVKSSIICYNCNSSGHFARNCP 94
+C +GH+A++C C+NC GH +R CP
Sbjct: 99 HCQQEGHIARECPNAPLDAAAGGRACFNCGQPGHLSRACP 138
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-------ATESVTCYN 61
CYNC GH CP S G G CY C GH AREC A C+N
Sbjct: 69 CYNCGRPGHISRDCPNARSGGNMGG--GRACYHCQQEGHIARECPNAPLDAAAGGRACFN 126
Query: 62 CSGQGHVAKDCTVK 75
C GH+++ C VK
Sbjct: 127 CGQPGHLSRACPVK 140
>gi|320580572|gb|EFW94794.1| zinc finger protein, putative [Ogataea parapolymorpha DL-1]
Length = 390
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE---SVTCYNCSGQ 65
CYNC GH CP+ + CY C GH EC+ CYNC
Sbjct: 254 CYNCKQPGHESGDCPEPKQTTQKQ------CYNCKQTGHVQSECSEPLRPVSKCYNCGKI 307
Query: 66 GHVAKDCTVKS---SIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKS 122
GH+AK C+ + C+ C HFAR+C + K CYAC + GH++K+C + G +
Sbjct: 308 GHLAKGCSAARGGPKVTCHKCGGLNHFARDCQSGVVK-CYACGKTGHISKDCTSASGGSN 366
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDCKL 148
+ TCY CG GH+S C++
Sbjct: 367 FN-----AKTCYKCGESGHISKFCEM 387
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 50/115 (43%), Gaps = 13/115 (11%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNC- 93
CYKC GHFA C CYNC GH + DC CYNC +GH C
Sbjct: 233 TCYKCGQVGHFADACQETERLCYNCKQPGHESGDCPEPKQTTQKQCYNCKQTGHVQSECS 292
Query: 94 -PNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
P +CY C + GH+AK C G +TC+ CG H + DC+
Sbjct: 293 EPLRPVSKCYNCGKIGHLAKGCSAARGGP--------KVTCHKCGGLNHFARDCQ 339
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 20/122 (16%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT----ESVTC 59
T+ QCYNC GH Q C + ++ CY C GH A+ C+ VTC
Sbjct: 273 TTQKQCYNCKQTGHVQSECSEPLRPVSK-------CYNCGKIGHLAKGCSAARGGPKVTC 325
Query: 60 YNCSGQGHVAKDCTVKSSII-CYNCNSSGHFARNCP------NDSSKRCYACHQAGHMAK 112
+ C G H A+DC +S ++ CY C +GH +++C N ++K CY C ++GH++K
Sbjct: 326 HKCGGLNHFARDC--QSGVVKCYACGKTGHISKDCTSASGGSNFNAKTCYKCGESGHISK 383
Query: 113 EC 114
C
Sbjct: 384 FC 385
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGH 67
+CYNC GH C SA G KV C+KC HFAR+C + V CY C GH
Sbjct: 300 KCYNCGKIGHLAKGC----SAARGGPKV--TCHKCGGLNHFARDCQSGVVKCYACGKTGH 353
Query: 68 VAKDCTVKS------SIICYNCNSSGHFARNCPNDSS 98
++KDCT S + CY C SGH ++ C DS
Sbjct: 354 ISKDCTSASGGSNFNAKTCYKCGESGHISKFCEMDSE 390
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 12/60 (20%)
Query: 99 KRCYACHQAGHMAKEC------------PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY C Q GH A C PG +G PEP CY C GH+ +C
Sbjct: 232 RTCYKCGQVGHFADACQETERLCYNCKQPGHESGDCPEPKQTTQKQCYNCKQTGHVQSEC 291
>gi|85098402|ref|XP_960605.1| hypothetical protein NCU08923 [Neurospora crassa OR74A]
gi|28922111|gb|EAA31369.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 183
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 67/153 (43%), Gaps = 45/153 (29%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARG----DKVGIV----------------CYKCNNY 45
+CYNC + GH CP+ +AR + G + CYKC
Sbjct: 31 AAKCYNCGNEGHMSRDCPEGPKDNARTCYRCGQTGHISRDCSQSGGGQSSGAECYKCGEV 90
Query: 46 GHFARECATESV--------------------TCYNCSGQGHVAKDCTVKSSIICYNCNS 85
GH AR C+ TCY+C G GH+++DC S CYNC
Sbjct: 91 GHIARNCSKGGASYGGGYQNSGYGGGFGGPQKTCYSCGGIGHMSRDCVNGSK--CYNCGE 148
Query: 86 SGHFARNCPNDS---SKRCYACHQAGHMAKECP 115
SGHF+R+CP DS K CY C Q GH+ +CP
Sbjct: 149 SGHFSRDCPKDSGSGEKICYKCQQPGHVQSQCP 181
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 67/169 (39%), Gaps = 50/169 (29%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT----ESVTCYN 61
T C+ C H CP K +A CY C N GH +R+C + TCY
Sbjct: 10 TRACFTCGQTTHQARDCPNKGAAK---------CYNCGNEGHMSRDCPEGPKDNARTCYR 60
Query: 62 CSGQGHVAKDCTVKSS-----IICYNCNSSGHFARNCPNDSS------------------ 98
C GH+++DC+ CY C GH ARNC +
Sbjct: 61 CGQTGHISRDCSQSGGGQSSGAECYKCGEVGHIARNCSKGGASYGGGYQNSGYGGGFGGP 120
Query: 99 -KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
K CY+C GHM+++C V+ S CY CG GH S DC
Sbjct: 121 QKTCYSCGGIGHMSRDC------------VNGS-KCYNCGESGHFSRDC 156
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 41/102 (40%), Gaps = 14/102 (13%)
Query: 7 IQCYNCFDFGHYQYSCP----------QKSSADARGDKVGIVCYKCNNYGHFARECATES 56
+CY C + GH +C Q S CY C GH +R+C S
Sbjct: 82 AECYKCGEVGHIARNCSKGGASYGGGYQNSGYGGGFGGPQKTCYSCGGIGHMSRDCVNGS 141
Query: 57 VTCYNCSGQGHVAKDCTVKS---SIICYNCNSSGHFARNCPN 95
CYNC GH ++DC S ICY C GH CP+
Sbjct: 142 -KCYNCGESGHFSRDCPKDSGSGEKICYKCQQPGHVQSQCPS 182
>gi|156848103|ref|XP_001646934.1| hypothetical protein Kpol_2000p41 [Vanderwaltozyma polyspora DSM
70294]
gi|156117616|gb|EDO19076.1| hypothetical protein Kpol_2000p41 [Vanderwaltozyma polyspora DSM
70294]
Length = 158
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 27/122 (22%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-------------T 54
QCYNC + GH + C + CY CN GH +REC
Sbjct: 48 QCYNCGETGHVKTECTIQR------------CYNCNQTGHISRECPEPKKGRFSGSSKPN 95
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKE 113
V CYNC G H+AKDC +++ CY+C GH +++CP+ + ++ CY C+Q GH+++E
Sbjct: 96 PRVACYNCGGPNHMAKDC-LQTGSKCYSCGKFGHLSKDCPSGAGEKVCYNCNQTGHISRE 154
Query: 114 CP 115
CP
Sbjct: 155 CP 156
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 62/117 (52%), Gaps = 16/117 (13%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
CY C GH A C +E + CYNC+ GHV +CT+ ++ CYNC +GH C
Sbjct: 5 ACYICGKLGHLAEGCDSEKL-CYNCNQPGHVQSECTMARTVEHKQCYNCGETGHVKTEC- 62
Query: 95 NDSSKRCYACHQAGHMAKECPGQTAGK-----SPEPVVDMSLTCYVCGHQGHLSYDC 146
+ +RCY C+Q GH+++ECP G+ P P V CY CG H++ DC
Sbjct: 63 --TIQRCYNCNQTGHISRECPEPKKGRFSGSSKPNPRV----ACYNCGGPNHMAKDC 113
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 65/158 (41%), Gaps = 42/158 (26%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTCY 60
S CY C GH C + +CY CN GH EC E CY
Sbjct: 2 SQKACYICGKLGHLAEGCDSEK-----------LCYNCNQPGHVQSECTMARTVEHKQCY 50
Query: 61 NCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR------------CYACHQAG 108
NC GHV +CT++ CYNCN +GH +R CP R CY C
Sbjct: 51 NCGETGHVKTECTIQR---CYNCNQTGHISRECPEPKKGRFSGSSKPNPRVACYNCGGPN 107
Query: 109 HMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
HMAK+C QT K CY CG GHLS DC
Sbjct: 108 HMAKDCL-QTGSK-----------CYSCGKFGHLSKDC 133
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 66/150 (44%), Gaps = 31/150 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH Q C + + + CY C GH EC + CYNC+ GH+
Sbjct: 25 CYNCNQPGHVQSECTMARTVEHK------QCYNCGETGHVKTECTIQR--CYNCNQTGHI 76
Query: 69 AKDC------------TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
+++C + CYNC H A++C SK CY+C + GH++K+CP
Sbjct: 77 SRECPEPKKGRFSGSSKPNPRVACYNCGGPNHMAKDCLQTGSK-CYSCGKFGHLSKDCPS 135
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
K CY C GH+S +C
Sbjct: 136 GAGEK----------VCYNCNQTGHISREC 155
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 6 TIQ-CYNCFDFGHYQYSCPQKSSADARGD---KVGIVCYKCNNYGHFARECATESVTCYN 61
TIQ CYNC GH CP+ G + CY C H A++C CY+
Sbjct: 63 TIQRCYNCNQTGHISRECPEPKKGRFSGSSKPNPRVACYNCGGPNHMAKDCLQTGSKCYS 122
Query: 62 CSGQGHVAKDC-TVKSSIICYNCNSSGHFARNCP 94
C GH++KDC + +CYNCN +GH +R CP
Sbjct: 123 CGKFGHLSKDCPSGAGEKVCYNCNQTGHISRECP 156
>gi|302422156|ref|XP_003008908.1| cellular nucleic acid-binding protein [Verticillium albo-atrum
VaMs.102]
gi|261352054|gb|EEY14482.1| cellular nucleic acid-binding protein [Verticillium albo-atrum
VaMs.102]
gi|346970067|gb|EGY13519.1| cellular nucleic acid-binding protein [Verticillium dahliae
VdLs.17]
Length = 189
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 60/133 (45%), Gaps = 28/133 (21%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----------- 57
CY C GH CPQ + G G CYKC GH AR+C
Sbjct: 57 CYRCGQPGHISRDCPQSGGSMGGGGGGGGECYKCGELGHMARQCPKAGGGFGGGYGGGAG 116
Query: 58 ------------TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS---KRCY 102
TCY+C G GH+++DCT S CYNC +GHF+R+CP K CY
Sbjct: 117 GYSGGGGYGAPKTCYSCGGFGHMSRDCTNGSK--CYNCGENGHFSRDCPKGGEGGDKICY 174
Query: 103 ACHQAGHMAKECP 115
C Q GH+ +CP
Sbjct: 175 KCQQPGHIQSQCP 187
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 70/179 (39%), Gaps = 56/179 (31%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC---ATESVT 58
S+ + CY C GH CPQK A CY C N GH +REC ++ +
Sbjct: 6 SAPAPRTCYTCGVVGHQARECPQKGPAK---------CYNCGNEGHLSRECPDGPKDNKS 56
Query: 59 CYNCSGQGHVAKDCTVKSSII---------CYNCNSSGHFARNCPN-------------- 95
CY C GH+++DC + CY C GH AR CP
Sbjct: 57 CYRCGQPGHISRDCPQSGGSMGGGGGGGGECYKCGELGHMARQCPKAGGGFGGGYGGGAG 116
Query: 96 --------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ K CY+C GHM+++C T G CY CG GH S DC
Sbjct: 117 GYSGGGGYGAPKTCYSCGGFGHMSRDC---TNGS----------KCYNCGENGHFSRDC 162
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT 54
T+ +CYNC + GH+ CP+ GDK +CYKC GH +C +
Sbjct: 144 TNGSKCYNCGENGHFSRDCPKGGEG---GDK---ICYKCQQPGHIQSQCPS 188
>gi|384496468|gb|EIE86959.1| hypothetical protein RO3G_11670 [Rhizopus delemar RA 99-880]
Length = 229
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 59/130 (45%), Gaps = 21/130 (16%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNC-- 93
CYKC N GHFA C CYNC GH + DCT + C+NC GH C
Sbjct: 8 CYKCGNVGHFANVCPEAERLCYNCKQPGHYSADCTTPKVVEPKQCFNCGGVGHIQSQCTS 67
Query: 94 ----------PNDSSKRCYACHQAGHMAKECPGQTAGKSP------EPVVDMSLTCYVCG 137
P+ + +C+ C Q GH+AKEC + + P +P ++ C+ CG
Sbjct: 68 PRSTAPVATKPSRALPQCFNCQQHGHLAKECTQPSQPREPRNNSLRKPRRQRNIICHKCG 127
Query: 138 HQGHLSYDCK 147
H + DCK
Sbjct: 128 GINHFAKDCK 137
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 26/132 (19%)
Query: 8 QCYNCFDFGHYQYSC--PQKSSADA-RGDKVGIVCYKCNNYGHFARECATES-------- 56
QC+NC GH Q C P+ ++ A + + C+ C +GH A+EC S
Sbjct: 51 QCFNCGGVGHIQSQCTSPRSTAPVATKPSRALPQCFNCQQHGHLAKECTQPSQPREPRNN 110
Query: 57 ----------VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN----DSSKRCY 102
+ C+ C G H AKDC S I+CYNCN GH AR C + K C+
Sbjct: 111 SLRKPRRQRNIICHKCGGINHFAKDCKA-SDILCYNCNKYGHIARECTSPGFKPKPKTCF 169
Query: 103 ACHQAGHMAKEC 114
C + GH+A+ C
Sbjct: 170 VCQKPGHIARNC 181
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 45/173 (26%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---------- 58
CYNC GHY C + + C+ C GH +C + T
Sbjct: 28 CYNCKQPGHYSADCTTPKVVEPKQ------CFNCGGVGHIQSQCTSPRSTAPVATKPSRA 81
Query: 59 ---CYNCSGQGHVAKDCTVKS-----------------SIICYNCNSSGHFARNCPNDSS 98
C+NC GH+AK+CT S +IIC+ C HFA++C S
Sbjct: 82 LPQCFNCQQHGHLAKECTQPSQPREPRNNSLRKPRRQRNIICHKCGGINHFAKDC-KASD 140
Query: 99 KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
CY C++ GH+A+EC + G P+P TC+VC GH++ +C LV++
Sbjct: 141 ILCYNCNKYGHIAREC--TSPGFKPKP-----KTCFVCQKPGHIARNC-LVKR 185
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 2 SSTSTIQCYNCFDFGHYQYSC--------PQKSSADARGDKVGIVCYKCNNYGHFARECA 53
S + QC+NC GH C P+ +S + I+C+KC HFA++C
Sbjct: 78 PSRALPQCFNCQQHGHLAKECTQPSQPREPRNNSLRKPRRQRNIICHKCGGINHFAKDCK 137
Query: 54 TESVTCYNCSGQGHVAKDCT----VKSSIICYNCNSSGHFARNC 93
+ CYNC+ GH+A++CT C+ C GH ARNC
Sbjct: 138 ASDILCYNCNKYGHIARECTSPGFKPKPKTCFVCQKPGHIARNC 181
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND---SSKRCYACHQAGHMAKEC 114
+CY C GH A C ++ +CYNC GH++ +C K+C+ C GH+ +C
Sbjct: 7 SCYKCGNVGHFANVCP-EAERLCYNCKQPGHYSADCTTPKVVEPKQCFNCGGVGHIQSQC 65
Query: 115 --PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
P TA + +P + C+ C GHL+ +C
Sbjct: 66 TSPRSTAPVATKPSRALP-QCFNCQQHGHLAKEC 98
>gi|358386406|gb|EHK24002.1| hypothetical protein TRIVIDRAFT_138406, partial [Trichoderma virens
Gv29-8]
Length = 194
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 79/205 (38%), Gaps = 73/205 (35%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATES 56
MSS S CY C + GHY C SSA+ +CY C GH + C +TE+
Sbjct: 1 MSSLSRRACYKCGNVGHYAEVC---SSAER-------LCYNCKQPGHESNGCPLPRSTEA 50
Query: 57 VTCYNCSGQGHVAKDCT------VKSSIICYNCNSSGHFARNCPNDS------------- 97
CY+C G GHV DC +S CYNC GH AR CPN
Sbjct: 51 KQCYHCQGLGHVQADCPTLRLSGTATSGRCYNCGQPGHLARACPNPGNAGMGRGAPIGRG 110
Query: 98 ------------------------------------SKRCYACHQAGHMAKECPGQTAGK 121
+ +CYAC + GH++++C G
Sbjct: 111 GFVGGYGRGGFANGPRPATCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGG- 169
Query: 122 SPEPVVDMSLTCYVCGHQGHLSYDC 146
P+ TCY CG GH+S DC
Sbjct: 170 ---PLNTAGKTCYQCGEAGHISRDC 191
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 60/150 (40%), Gaps = 41/150 (27%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC---------- 52
ST QCY+C GH Q CP + G CY C GH AR C
Sbjct: 47 STEAKQCYHCQGLGHVQADCP---TLRLSGTATSGRCYNCGQPGHLARACPNPGNAGMGR 103
Query: 53 --------------------ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARN 92
TCY C G H A+DC ++ + CY C GH +R+
Sbjct: 104 GAPIGRGGFVGGYGRGGFANGPRPATCYKCGGPNHFARDCQAQA-MKCYACGKLGHISRD 162
Query: 93 CP-------NDSSKRCYACHQAGHMAKECP 115
C N + K CY C +AGH++++CP
Sbjct: 163 CTAPNGGPLNTAGKTCYQCGEAGHISRDCP 192
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 58/137 (42%), Gaps = 27/137 (19%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + S CY+C GH +CP
Sbjct: 8 ACYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCPLPRSTEAKQCYHCQGLGHVQADCP 67
Query: 95 ------NDSSKRCYACHQAGHMAKEC--PGQTAGKSPEPVV----------------DMS 130
+S RCY C Q GH+A+ C PG P+
Sbjct: 68 TLRLSGTATSGRCYNCGQPGHLARACPNPGNAGMGRGAPIGRGGFVGGYGRGGFANGPRP 127
Query: 131 LTCYVCGHQGHLSYDCK 147
TCY CG H + DC+
Sbjct: 128 ATCYKCGGPNHFARDCQ 144
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 46/124 (37%), Gaps = 49/124 (39%)
Query: 1 MSSTSTI-QCYNCFDFGHYQYSCPQKSSAD-ARGDKVG-------------------IVC 39
+S T+T +CYNC GH +CP +A RG +G C
Sbjct: 71 LSGTATSGRCYNCGQPGHLARACPNPGNAGMGRGAPIGRGGFVGGYGRGGFANGPRPATC 130
Query: 40 YKCNNYGHFARECATESV----------------------------TCYNCSGQGHVAKD 71
YKC HFAR+C +++ TCY C GH+++D
Sbjct: 131 YKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGGPLNTAGKTCYQCGEAGHISRD 190
Query: 72 CTVK 75
C K
Sbjct: 191 CPQK 194
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S CY C + GH+A C + + + CY C Q GH + CP P + CY
Sbjct: 5 SRRACYKCGNVGHYAEVC-SSAERLCYNCKQPGHESNGCP--------LPRSTEAKQCYH 55
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ DC ++ S
Sbjct: 56 CQGLGHVQADCPTLRLS 72
>gi|109131255|ref|XP_001096279.1| PREDICTED: zinc finger CCHC domain-containing protein 13-like
[Macaca mulatta]
gi|355757474|gb|EHH60999.1| Zinc finger CCHC domain-containing protein 13 [Macaca fascicularis]
Length = 170
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 21/158 (13%)
Query: 10 YNCFDFGHYQYSCPQKSS-----------ADARGDKVGIVCYKCNNYGHFARECATESVT 58
+ C GH+ CP+ + + + CY+C +GH A+ C
Sbjct: 7 FACGRSGHWTRGCPRGGAGGQGGGGHGRGSQCSSTTLSYTCYRCGEFGHHAKNCVLLGNI 66
Query: 59 CYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
CYNC GH+AKDC + CY C GH A +C + ++CY+C + GH+ K+C
Sbjct: 67 CYNCGRSGHIAKDCKEPKRERDQHCYTCGRLGHLACDCDHQKEQKCYSCGKLGHIQKDCA 126
Query: 116 -------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G+T + + CY CG GHL+ +C
Sbjct: 127 QVKCYRCGETGHVAINCSKASQVNCYRCGESGHLAREC 164
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 63/142 (44%), Gaps = 38/142 (26%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------- 54
S+T + CY C +FGH+ +C +G +CY C GH A++C
Sbjct: 40 STTLSYTCYRCGEFGHHAKNCVL----------LGNICYNCGRSGHIAKDCKEPKRERDQ 89
Query: 55 ------------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND 96
+ CY+C GH+ KDC + + CY C +GH A NC
Sbjct: 90 HCYTCGRLGHLACDCDHQKEQKCYSCGKLGHIQKDC---AQVKCYRCGETGHVAINCSKA 146
Query: 97 SSKRCYACHQAGHMAKECPGQT 118
S CY C ++GH+A+ECP +
Sbjct: 147 SQVNCYRCGESGHLARECPSEA 168
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CY C GH C + CY C GH ++CA V CY C GHV
Sbjct: 91 CYTCGRLGHLACDCDHQKEQK---------CYSCGKLGHIQKDCA--QVKCYRCGETGHV 139
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
A +C+ S + CY C SGH AR CP++++
Sbjct: 140 AINCSKASQVNCYRCGESGHLARECPSEAT 169
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 34/92 (36%), Gaps = 32/92 (34%)
Query: 81 YNCNSSGHFARNCPNDS--------------------SKRCYACHQAGHMAKECPGQTAG 120
+ C SGH+ R CP S CY C + GH AK C
Sbjct: 7 FACGRSGHWTRGCPRGGAGGQGGGGHGRGSQCSSTTLSYTCYRCGEFGHHAKNC------ 60
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
V + CY CG GH++ DCK ++
Sbjct: 61 ------VLLGNICYNCGRSGHIAKDCKEPKRE 86
>gi|358395035|gb|EHK44428.1| hypothetical protein TRIATDRAFT_300647 [Trichoderma atroviride IMI
206040]
Length = 222
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 81/205 (39%), Gaps = 73/205 (35%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATES 56
MSS S CY C + GHY C SSA+ +CY C GH + C +TE+
Sbjct: 1 MSSLSRRACYKCGNVGHYAEVC---SSAER-------LCYNCKQPGHESNGCPLPRSTEA 50
Query: 57 VTCYNCSGQGHVAKDC-TVKSSII-----CYNCNSSGHFARNCPNDSSK----------- 99
CY+C G GHV DC T++ S CYNC GH AR CPN +
Sbjct: 51 KQCYHCQGLGHVQADCPTLRLSGTATGGRCYNCGQPGHLARACPNPGNPGMGRGAPMGRG 110
Query: 100 --------------------------------------RCYACHQAGHMAKECPGQTAGK 121
+CYAC + GH++++C G
Sbjct: 111 GFVGGYGRGGFANGPRPATCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGG- 169
Query: 122 SPEPVVDMSLTCYVCGHQGHLSYDC 146
P+ TCY CG GH+S DC
Sbjct: 170 ---PLNTAGKTCYQCGEAGHISRDC 191
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 64/154 (41%), Gaps = 41/154 (26%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC---------- 52
ST QCY+C GH Q CP + G G CY C GH AR C
Sbjct: 47 STEAKQCYHCQGLGHVQADCP---TLRLSGTATGGRCYNCGQPGHLARACPNPGNPGMGR 103
Query: 53 --------------------ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARN 92
TCY C G H A+DC ++ + CY C GH +R+
Sbjct: 104 GAPMGRGGFVGGYGRGGFANGPRPATCYKCGGPNHFARDCQAQA-MKCYACGKLGHISRD 162
Query: 93 CP-------NDSSKRCYACHQAGHMAKECPGQTA 119
C N + K CY C +AGH++++CP +TA
Sbjct: 163 CTAPNGGPLNTAGKTCYQCGEAGHISRDCPQKTA 196
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 57/137 (41%), Gaps = 27/137 (19%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + S CY+C GH +CP
Sbjct: 8 ACYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCPLPRSTEAKQCYHCQGLGHVQADCP 67
Query: 95 ------NDSSKRCYACHQAGHMAKEC--PGQTAGKSPEPVV----------------DMS 130
+ RCY C Q GH+A+ C PG P+
Sbjct: 68 TLRLSGTATGGRCYNCGQPGHLARACPNPGNPGMGRGAPMGRGGFVGGYGRGGFANGPRP 127
Query: 131 LTCYVCGHQGHLSYDCK 147
TCY CG H + DC+
Sbjct: 128 ATCYKCGGPNHFARDCQ 144
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S CY C + GH+A C + + + CY C Q GH + CP P + CY
Sbjct: 5 SRRACYKCGNVGHYAEVC-SSAERLCYNCKQPGHESNGCP--------LPRSTEAKQCYH 55
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ DC ++ S
Sbjct: 56 CQGLGHVQADCPTLRLS 72
>gi|218193996|gb|EEC76423.1| hypothetical protein OsI_14098 [Oryza sativa Indica Group]
Length = 261
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 68/145 (46%), Gaps = 17/145 (11%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE--SVTCYN 61
TS C+NC GH C K +C+ C+ GH AR+C + S C
Sbjct: 100 TSETVCWNCKQSGHIATEC-----------KNDALCHTCSKTGHLARDCPSSGSSKLCNK 148
Query: 62 CSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGK 121
C GH+A DCT + + C NC GH AR C N+ C C+ +GH+A+ C T
Sbjct: 149 CFKPGHIAVDCTNERA--CNNCRQPGHIARECTNEPV--CNLCNVSGHLARNCRKTTISS 204
Query: 122 SPEPVVDMSLTCYVCGHQGHLSYDC 146
+ +TC +CG GH+S +C
Sbjct: 205 EIQGGPFRDITCRLCGKPGHISRNC 229
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 17/111 (15%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNCPND 96
VC+ C GH A EC +++ C+ CS GH+A+DC + SS +C C GH A +C N+
Sbjct: 104 VCWNCKQSGHIATECKNDAL-CHTCSKTGHLARDCPSSGSSKLCNKCFKPGHIAVDCTNE 162
Query: 97 SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ C C Q GH+A+EC + EPV C +C GHL+ +C+
Sbjct: 163 --RACNNCRQPGHIAREC-------TNEPV------CNLCNVSGHLARNCR 198
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 55/125 (44%), Gaps = 25/125 (20%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYN 61
SS S+ C CF GH C + + C C GH AREC E V C
Sbjct: 139 SSGSSKLCNKCFKPGHIAVDCTNERA-----------CNNCRQPGHIARECTNEPV-CNL 186
Query: 62 CSGQGHVAKDC---TVKSSI--------ICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
C+ GH+A++C T+ S I C C GH +RNC ++ C C GHM
Sbjct: 187 CNVSGHLARNCRKTTISSEIQGGPFRDITCRLCGKPGHISRNC--MTTMICGTCGGRGHM 244
Query: 111 AKECP 115
+ ECP
Sbjct: 245 SYECP 249
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 14/78 (17%)
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVD 128
A +CT S +C+NC SGH A C ND+ C+ C + GH+A++CP + K
Sbjct: 96 AAECT--SETVCWNCKQSGHIATECKNDA--LCHTCSKTGHLARDCPSSGSSK------- 144
Query: 129 MSLTCYVCGHQGHLSYDC 146
C C GH++ DC
Sbjct: 145 ---LCNKCFKPGHIAVDC 159
>gi|46111529|ref|XP_382822.1| hypothetical protein FG02646.1 [Gibberella zeae PH-1]
gi|408400341|gb|EKJ79423.1| hypothetical protein FPSE_00354 [Fusarium pseudograminearum CS3096]
Length = 236
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 78/207 (37%), Gaps = 74/207 (35%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TES 56
MSS S CY C + GHY C SSA+ +CY C GH + C TE+
Sbjct: 1 MSSLSRRACYKCGNVGHYAEVC---SSAER-------LCYNCKQPGHESNGCPLPRTTEA 50
Query: 57 VTCYNCSGQGHVAKDCTV------KSSIICYNCNSSGHFARNCPND-------------- 96
CY+C G GHV DC +S CYNC GH AR CPN
Sbjct: 51 KQCYHCQGLGHVQADCPTLRLSGTGTSGRCYNCGQPGHLARACPNPVGPGPMGRGAPMGR 110
Query: 97 ------------------------------------SSKRCYACHQAGHMAKECPGQTAG 120
+ +CYAC + GH++++C G
Sbjct: 111 GGFPGGYGRGGFAGGPRPATCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGG 170
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDCK 147
P+ TCY CG GH+S DC
Sbjct: 171 ----PLNTAGKTCYQCGEAGHISRDCP 193
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 29/127 (22%)
Query: 1 MSSTSTI-QCYNCFDFGHYQYSCPQKSSADARGDKVGI---------------------V 38
+S T T +CYNC GH +CP G +
Sbjct: 71 LSGTGTSGRCYNCGQPGHLARACPNPVGPGPMGRGAPMGRGGFPGGYGRGGFAGGPRPAT 130
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVK-------SSIICYNCNSSGHFAR 91
CYKC HFAR+C +++ CY C GH+++DCT + CY C +GH +R
Sbjct: 131 CYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGGPLNTAGKTCYQCGEAGHISR 190
Query: 92 NCPNDSS 98
+CP ++
Sbjct: 191 DCPQKNA 197
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S CY C + GH+A C + + + CY C Q GH + CP P + CY
Sbjct: 5 SRRACYKCGNVGHYAEVC-SSAERLCYNCKQPGHESNGCP--------LPRTTEAKQCYH 55
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ DC ++ S
Sbjct: 56 CQGLGHVQADCPTLRLS 72
>gi|145238910|ref|XP_001392102.1| cellular nucleic acid-binding protein [Aspergillus niger CBS
513.88]
gi|134076603|emb|CAK45156.1| unnamed protein product [Aspergillus niger]
Length = 171
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 71/165 (43%), Gaps = 43/165 (26%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQG 66
C+NC D H CP+K + CY C GH +REC A + +CY C G G
Sbjct: 10 CFNCGDASHQARDCPKKGTP---------TCYNCGGQGHVSRECTVAPKEKSCYRCGGVG 60
Query: 67 HVAKDCTVKSSII----------CYNCNSSGHFARNCPN---------DSSKRCYACHQA 107
H++++C + CY C GH ARNCP + CY+C
Sbjct: 61 HISRECQASPAEGFGAAAGGGQECYKCGRVGHIARNCPQSGGYSGGFGGRQQTCYSCGGF 120
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
GHMA++C T G+ CY CG GH+S DC K
Sbjct: 121 GHMARDC---TNGQK----------CYNCGEVGHVSRDCPTEAKG 152
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 62/128 (48%), Gaps = 14/128 (10%)
Query: 36 GIVCYKCNNYGHFARECATESV-TCYNCSGQGHVAKDCTV-KSSIICYNCNSSGHFARNC 93
G C+ C + H AR+C + TCYNC GQGHV+++CTV CY C GH +R C
Sbjct: 7 GRGCFNCGDASHQARDCPKKGTPTCYNCGGQGHVSRECTVAPKEKSCYRCGGVGHISREC 66
Query: 94 P----------NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLS 143
+ CY C + GH+A+ CP +G TCY CG GH++
Sbjct: 67 QASPAEGFGAAAGGGQECYKCGRVGHIARNCP--QSGGYSGGFGGRQQTCYSCGGFGHMA 124
Query: 144 YDCKLVQK 151
DC QK
Sbjct: 125 RDCTNGQK 132
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGH 67
+CY C GH +CPQ CY C +GH AR+C T CYNC GH
Sbjct: 83 ECYKCGRVGHIARNCPQSGGYSGGFGGRQQTCYSCGGFGHMARDC-TNGQKCYNCGEVGH 141
Query: 68 VAKDCTV--KSSIICYNCNSSGHFARNCPN 95
V++DC K +CYNC GH CPN
Sbjct: 142 VSRDCPTEAKGERVCYNCKQPGHVQAACPN 171
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 55/120 (45%), Gaps = 15/120 (12%)
Query: 9 CYNCFDFGHYQYSC-PQKSSADARGDKVGIVCYKCNNYGHFARECA----------TESV 57
CY C GH C + G CYKC GH AR C
Sbjct: 53 CYRCGGVGHISRECQASPAEGFGAAAGGGQECYKCGRVGHIARNCPQSGGYSGGFGGRQQ 112
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS--SKRCYACHQAGHMAKECP 115
TCY+C G GH+A+DCT + CYNC GH +R+CP ++ + CY C Q GH+ CP
Sbjct: 113 TCYSCGGFGHMARDCT--NGQKCYNCGEVGHVSRDCPTEAKGERVCYNCKQPGHVQAACP 170
>gi|340914996|gb|EGS18337.1| DNA-binding protein hexbp-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 165
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 58/126 (46%), Gaps = 22/126 (17%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC------------- 52
T CY C GH CP + + G CYKC GH AR C
Sbjct: 45 TKTCYRCGQPGHISRDCPTTGGSG----QSGAECYKCGEIGHIARNCNKGAPYGGFNGGY 100
Query: 53 -ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS--SKRCYACHQAGH 109
TCY+C G GH+++DC + CYNC SGH +R CP +S K CY C Q GH
Sbjct: 101 GGYGQKTCYSCGGIGHLSRDCVNGNK--CYNCGVSGHLSRECPKESGGEKICYKCQQPGH 158
Query: 110 MAKECP 115
+ +CP
Sbjct: 159 VQSQCP 164
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 38/171 (22%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSAD--------ARGDKVGIVCYKCNNYGHFARECAT 54
+ S C+ C H CP K++A G K CY+C GH +R+C T
Sbjct: 4 AASGQACFTCGQTTHKARDCPNKAAAKCYNCGRDCPEGPKDTKTCYRCGQPGHISRDCPT 63
Query: 55 ------ESVTCYNCSGQGHVAKDCTVKSSI-------------ICYNCNSSGHFARNCPN 95
CY C GH+A++C + CY+C GH +R+C N
Sbjct: 64 TGGSGQSGAECYKCGEIGHIARNCNKGAPYGGFNGGYGGYGQKTCYSCGGIGHLSRDCVN 123
Query: 96 DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ +CY C +GH+++ECP ++ G+ CY C GH+ C
Sbjct: 124 GN--KCYNCGVSGHLSRECPKESGGEK---------ICYKCQQPGHVQSQC 163
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Query: 2 SSTSTIQCYNCFDFGHYQYSC----PQKSSADARGDKVGIVCYKCNNYGHFARECATESV 57
S S +CY C + GH +C P G CY C GH +R+C +
Sbjct: 67 SGQSGAECYKCGEIGHIARNCNKGAPYGGFNGGYGGYGQKTCYSCGGIGHLSRDCVNGN- 125
Query: 58 TCYNCSGQGHVAKDCTVKS--SIICYNCNSSGHFARNCPN 95
CYNC GH++++C +S ICY C GH CPN
Sbjct: 126 KCYNCGVSGHLSRECPKESGGEKICYKCQQPGHVQSQCPN 165
>gi|326500674|dbj|BAJ95003.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 306
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 78/184 (42%), Gaps = 55/184 (29%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
I C NC GH CP S+ C CN GHFA EC +++V C+NC G
Sbjct: 108 IICKNCRRPGHIARDCPSAST-----------CNNCNLPGHFAAECTSKTV-CWNCKKSG 155
Query: 67 HVAKDCTVKSSIICYNCNSSGHFARNCPNDSS---------------------KRCYACH 105
H+A +C K+ +C+ C+ +GH AR+CP S + C C
Sbjct: 156 HIATEC--KNEALCHTCSKTGHMARDCPASGSNAKLCNNCFKPGHIAVDCTNDRACNNCR 213
Query: 106 QAGHMAKECP-----------GQTAGKSPEPVVDMS---------LTCYVCGHQGHLSYD 145
Q GH+A+EC G A P+ S ++C +CG GH+S +
Sbjct: 214 QPGHIARECKNDPVCNLCNVSGHLARSCPKTTTLASEIHGGPFRDISCRICGQPGHISRN 273
Query: 146 CKLV 149
C +
Sbjct: 274 CMVT 277
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 70/150 (46%), Gaps = 35/150 (23%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+ C GH CP S ++A+ +C C GH A +C T C NC GH+
Sbjct: 167 CHTCSKTGHMARDCPA-SGSNAK------LCNNCFKPGHIAVDC-TNDRACNNCRQPGHI 218
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSSK------------RCYACHQAGHMAKECPG 116
A++C K+ +C CN SGH AR+CP ++ C C Q GH+++ C
Sbjct: 219 AREC--KNDPVCNLCNVSGHLARSCPKTTTLASEIHGGPFRDISCRICGQPGHISRNC-- 274
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+++ C CG +GH+SY+C
Sbjct: 275 -----------MVTVICDTCGGRGHMSYEC 293
>gi|10039329|dbj|BAB13307.1| vasa-related protein CnVAS1 [Hydra vulgaris]
Length = 797
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 17/118 (14%)
Query: 39 CYKCNNYGHFARECATESV-----TCYNCSGQGHVAKDCTVKSS---IICYNCNSSGHFA 90
C+KC GH +REC C+ C +GH+++DC S C+ C GH +
Sbjct: 71 CHKCGKEGHMSRECPDGGGGGGGRACFKCKQEGHMSRDCPQGGSGGGRACHKCGKEGHMS 130
Query: 91 RNCPNDSS--KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
R CP+ + C+ C Q GHM+K+CP + G S TC+ CG +GH+S +C
Sbjct: 131 RECPDGGGGGRACFKCKQEGHMSKDCPQGSGGGG-------SRTCHKCGKEGHMSREC 181
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 15/117 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTCYNCSG 64
C+ C GH CP D G G C+KC GH +R+C + C+ C
Sbjct: 71 CHKCGKEGHMSRECP-----DGGGGGGGRACFKCKQEGHMSRDCPQGGSGGGRACHKCGK 125
Query: 65 QGHVAKDCTVKSS--IICYNCNSSGHFARNCPNDS----SKRCYACHQAGHMAKECP 115
+GH++++C C+ C GH +++CP S S+ C+ C + GHM++ECP
Sbjct: 126 EGHMSRECPDGGGGGRACFKCKQEGHMSKDCPQGSGGGGSRTCHKCGKEGHMSRECP 182
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 80 CYNCNSSGHFARNCPNDSSK--RCYACHQAGHMAKECPGQTAGKSPEPVV 127
C C SGHFA++CP+ + C C ++GH AK+C P+ V
Sbjct: 260 CRICKQSGHFAKDCPDKKPRDDTCRRCGESGHFAKDCEAPQDPNKPQAVT 309
>gi|85095325|ref|XP_960060.1| hypothetical protein NCU05800 [Neurospora crassa OR74A]
gi|28921519|gb|EAA30824.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 225
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 56/116 (48%), Gaps = 25/116 (21%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVG------------------IVCYKCNNYG 46
ST +CYNC GHY +CP + RG VG CYKC
Sbjct: 76 STSRCYNCGQPGHYMRACPNPPTGIPRGAPVGRGGFGGFGRGGFAGGARPATCYKCGGPN 135
Query: 47 HFARECATESVTCYNCSGQGHVAKDCTVK-------SSIICYNCNSSGHFARNCPN 95
HFAR+C +++ CY C GH+++DCT + CY C+ +GH +R+CPN
Sbjct: 136 HFARDCQAQAMKCYACGKLGHISRDCTAPNGGPLNTAGKTCYQCSETGHISRDCPN 191
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 78/203 (38%), Gaps = 71/203 (34%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATES 56
MSS S CY C + GH+ +C S+ R +CY C H + EC +TE+
Sbjct: 1 MSSLSRRACYKCGELGHHAEAC----SSPHR------LCYNCKQPNHESSECPLPRSTEA 50
Query: 57 VTCYNCSGQGHVAKDCTV------KSSIICYNCNSSGHFARNCPNDSS------------ 98
CY+C G GHV DC S+ CYNC GH+ R CPN +
Sbjct: 51 KQCYHCQGLGHVQADCPTLRISGAGSTSRCYNCGQPGHYMRACPNPPTGIPRGAPVGRGG 110
Query: 99 -----------------------------------KRCYACHQAGHMAKECPGQTAGKSP 123
+CYAC + GH++++C G
Sbjct: 111 FGGFGRGGFAGGARPATCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGG--- 167
Query: 124 EPVVDMSLTCYVCGHQGHLSYDC 146
P+ TCY C GH+S DC
Sbjct: 168 -PLNTAGKTCYQCSETGHISRDC 189
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 59/148 (39%), Gaps = 39/148 (26%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----- 57
ST QCY+C GH Q CP + G CY C GH+ R C
Sbjct: 47 STEAKQCYHCQGLGHVQADCP---TLRISGAGSTSRCYNCGQPGHYMRACPNPPTGIPRG 103
Query: 58 -----------------------TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
TCY C G H A+DC + ++ CY C GH +R+C
Sbjct: 104 APVGRGGFGGFGRGGFAGGARPATCYKCGGPNHFARDCQAQ-AMKCYACGKLGHISRDCT 162
Query: 95 -------NDSSKRCYACHQAGHMAKECP 115
N + K CY C + GH++++CP
Sbjct: 163 APNGGPLNTAGKTCYQCSETGHISRDCP 190
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 54/135 (40%), Gaps = 25/135 (18%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
CYKC GH A C++ CYNC H + +C + S CY+C GH +CP
Sbjct: 8 ACYKCGELGHHAEACSSPHRLCYNCKQPNHESSECPLPRSTEAKQCYHCQGLGHVQADCP 67
Query: 95 N------DSSKRCYACHQAGHMAKECPGQTAG-KSPEPV---------------VDMSLT 132
S+ RCY C Q GH + CP G PV T
Sbjct: 68 TLRISGAGSTSRCYNCGQPGHYMRACPNPPTGIPRGAPVGRGGFGGFGRGGFAGGARPAT 127
Query: 133 CYVCGHQGHLSYDCK 147
CY CG H + DC+
Sbjct: 128 CYKCGGPNHFARDCQ 142
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S CY C GH A C + + CY C Q H + ECP P + CY
Sbjct: 5 SRRACYKCGELGHHAEAC-SSPHRLCYNCKQPNHESSECP--------LPRSTEAKQCYH 55
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ DC ++ S
Sbjct: 56 CQGLGHVQADCPTLRIS 72
>gi|121708529|ref|XP_001272160.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
clavatus NRRL 1]
gi|119400308|gb|EAW10734.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
clavatus NRRL 1]
Length = 488
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 62/119 (52%), Gaps = 14/119 (11%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQG 66
C NC H CP SA+ G+ C +CN GHFA++C A TC NC +
Sbjct: 329 CRNCGAPDHKAADCPNPRSAE------GVECKRCNEVGHFAKDCPQAPPPRTCRNCGSED 382
Query: 67 HVAKDCTVK---SSIICYNCNSSGHFARNC--PNDSSK-RCYACHQAGHMAKECPGQTA 119
H+A+DC S++ C NC+ GHF+R+C D SK +C C + GH K CP T+
Sbjct: 383 HIARDCDKPRDVSTVTCRNCDEVGHFSRDCTKKKDWSKVKCNNCGEMGHTIKRCPQATS 441
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 65/146 (44%), Gaps = 18/146 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT---ESVTCYNCSG 64
+C NC + GH C ++ + R V + C CN GH AR+C + C NC
Sbjct: 278 KCSNCGEMGHTARGCKEERALIER---VEVKCVNCNASGHRARDCPEVRRDRYACRNCGA 334
Query: 65 QGHVAKDCTVKSS---IICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAG 120
H A DC S + C CN GHFA++CP R C C H+A++C
Sbjct: 335 PDHKAADCPNPRSAEGVECKRCNEVGHFAKDCPQAPPPRTCRNCGSEDHIARDC------ 388
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDC 146
+P ++TC C GH S DC
Sbjct: 389 --DKPRDVSTVTCRNCDEVGHFSRDC 412
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 46/103 (44%), Gaps = 15/103 (14%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TESVT 58
S ++C C + GH+ CPQ C C + H AR+C +VT
Sbjct: 347 SAEGVECKRCNEVGHFAKDCPQAPPP--------RTCRNCGSEDHIARDCDKPRDVSTVT 398
Query: 59 CYNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCPNDSS 98
C NC GH ++DCT K S + C NC GH + CP +S
Sbjct: 399 CRNCDEVGHFSRDCTKKKDWSKVKCNNCGEMGHTIKRCPQATS 441
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 25 KSSADARGDKVGIVCYKCNNYGHFARECAT--ESVTCYNCSGQGHVAKDCTVKSSII--- 79
+ SA G+ C C N HFAREC + + C+NC +GH +CT K +
Sbjct: 51 EPSAAGGGEGNDNKCRNCGNESHFARECPEPRKGMACFNCGEEGHSKAECT-KPRVFKGS 109
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
C CN GH A CP+ C C GH EC
Sbjct: 110 CRICNKEGHPAAECPDRPPDVCKNCQSEGHRTIEC 144
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC + H+ CP+ + G+ C+ C GH EC V +C C+
Sbjct: 64 KCRNCGNESHFARECPEP--------RKGMACFNCGEEGHSKAECTKPRVFKGSCRICNK 115
Query: 65 QGHVAKDCTVKSSIICYNCNSSGHFARNC 93
+GH A +C + +C NC S GH C
Sbjct: 116 EGHPAAECPDRPPDVCKNCQSEGHRTIEC 144
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 14/96 (14%)
Query: 59 CYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNC--PNDSSKRCYACHQAGHMAKECP 115
C NC + H A++C + + C+NC GH C P C C++ GH A ECP
Sbjct: 65 CRNCGNESHFARECPEPRKGMACFNCGEEGHSKAECTKPRVFKGSCRICNKEGHPAAECP 124
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
+ P V C C +GH + +C +K
Sbjct: 125 DRP------PDV-----CKNCQSEGHRTIECTENRK 149
>gi|440632924|gb|ELR02843.1| hypothetical protein GMDG_05776 [Geomyces destructans 20631-21]
Length = 525
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 69/169 (40%), Gaps = 39/169 (23%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC---ATESVTCYNCSG 64
+C NC + GH SCP++ D+ + C+ CN GH R+C + C NC
Sbjct: 265 KCNNCNEMGHITKSCPEEKREVL--DRASVTCFNCNETGHRMRDCHKPREDRFACRNCKQ 322
Query: 65 QGHVAKDCTVKSS---IICYNCNSSGHFARNCPNDSS----------------------- 98
GH +K+CT S + C NCN GHF+R+CP
Sbjct: 323 SGHSSKECTEPRSAEGVECKNCNEMGHFSRDCPTGGGGGGACHNCGQEGHRSKDCTEPRV 382
Query: 99 KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
C C + GH++KEC P+P + C C GH CK
Sbjct: 383 PTCRNCDEKGHISKEC--------PKPRDYSRIQCSNCQQMGHTKVRCK 423
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 58/127 (45%), Gaps = 20/127 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSGQ 65
C NC GH C + SA+ G+ C CN GHF+R+C T C+NC +
Sbjct: 317 CRNCKQSGHSSKECTEPRSAE------GVECKNCNEMGHFSRDCPTGGGGGGACHNCGQE 370
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNCPND---SSKRCYACHQAGHMAKECPGQTAGKS 122
GH +KDCT C NC+ GH ++ CP S +C C Q GH C
Sbjct: 371 GHRSKDCTEPRVPTCRNCDEKGHISKECPKPRDYSRIQCSNCQQMGHTKVRC-------- 422
Query: 123 PEPVVDM 129
EPV ++
Sbjct: 423 KEPVAEL 429
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 11/95 (11%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-TCYN 61
S ++C NC + GH+ CP C+ C GH +++C V TC N
Sbjct: 335 SAEGVECKNCNEMGHFSRDCPTGGGGGG-------ACHNCGQEGHRSKDCTEPRVPTCRN 387
Query: 62 CSGQGHVAKDCTVK---SSIICYNCNSSGHFARNC 93
C +GH++K+C S I C NC GH C
Sbjct: 388 CDEKGHISKECPKPRDYSRIQCSNCQQMGHTKVRC 422
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 38/93 (40%), Gaps = 10/93 (10%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------TCYNC 62
C+NC + GH + CP + G ++ CY C GH +C V TC C
Sbjct: 45 CFNCGEQGHMKGDCPNPRA----GGQLAGECYNCGEVGHNKADCPNPQVPREFTGTCRVC 100
Query: 63 SGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
GH A DC +C NC GH C N
Sbjct: 101 EAVGHRASDCPTAGPKLCKNCGDEGHTITACTN 133
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 42/103 (40%), Gaps = 21/103 (20%)
Query: 59 CYNCSGQGHVAKDCTVKSSI-----ICYNCNSSGHFARNCPNDSSKR-----CYACHQAG 108
C+NC QGH+ DC + CYNC GH +CPN R C C G
Sbjct: 45 CFNCGEQGHMKGDCPNPRAGGQLAGECYNCGEVGHNKADCPNPQVPREFTGTCRVCEAVG 104
Query: 109 HMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
H A +CP TAG C CG +GH C +K
Sbjct: 105 HRASDCP--TAGPK---------LCKNCGDEGHTITACTNPRK 136
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 51/146 (34%), Gaps = 19/146 (13%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-TCYNCSGQG 66
+CYNC + GH + CP + C C GH A +C T C NC +G
Sbjct: 70 ECYNCGEVGHNKADCPNPQVP----REFTGTCRVCEAVGHRASDCPTAGPKLCKNCGDEG 125
Query: 67 HVAKDCTVKSSIICYNCNSSG---------HFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
H CT I N ++ D K + K CP
Sbjct: 126 HTITACTNPRKIDRSNIEVVEVEVAWEGLCKAVKDRDMDDIKEAFL-----KYVKACPEA 180
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLS 143
T + E DM++ Y+ G Q L+
Sbjct: 181 TYPQLEEGFRDMNVPLYLIGLQRELA 206
>gi|448531555|ref|XP_003870274.1| Gis2 transcription factor [Candida orthopsilosis Co 90-125]
gi|380354628|emb|CCG24144.1| Gis2 transcription factor [Candida orthopsilosis]
Length = 177
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 71/159 (44%), Gaps = 33/159 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES--VTCYNCSGQG 66
CYNC GH CP+ ++ CY C + GH EC ++ CYNC G
Sbjct: 29 CYNCRKPGHESGDCPEPKQTTSK------QCYSCGDVGHIQTECPNQAQGAKCYNCGQFG 82
Query: 67 HVAKDCT-------------------VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQA 107
H++K+C S CY C HFAR+C ++K CYAC +
Sbjct: 83 HISKNCDQAPTGQAPPFKKSYGPRGGSASGTTCYKCGGPNHFARDCQAGNTK-CYACGKP 141
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GH++K+C G + S TCY CG GH+S +C
Sbjct: 142 GHISKDCHSAAGGSN-----AGSKTCYNCGKSGHISREC 175
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCP 94
CYKC GH A +C E CYNC GH + DC +S CY+C GH CP
Sbjct: 8 TCYKCGEAGHVADDCTQEERLCYNCRKPGHESGDCPEPKQTTSKQCYSCGDVGHIQTECP 67
Query: 95 NDS-SKRCYACHQAGHMAKECPGQTAGKS--------PEPVVDMSLTCYVCGHQGHLSYD 145
N + +CY C Q GH++K C G++ P TCY CG H + D
Sbjct: 68 NQAQGAKCYNCGQFGHISKNCDQAPTGQAPPFKKSYGPRGGSASGTTCYKCGGPNHFARD 127
Query: 146 CKL 148
C+
Sbjct: 128 CQA 130
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 62/137 (45%), Gaps = 35/137 (25%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----------- 52
T++ QCY+C D GH Q CP ++ G CY C +GH ++ C
Sbjct: 48 TTSKQCYSCGDVGHIQTECPNQAQ--------GAKCYNCGQFGHISKNCDQAPTGQAPPF 99
Query: 53 ---------ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC------PNDS 97
+ TCY C G H A+DC + CY C GH +++C N
Sbjct: 100 KKSYGPRGGSASGTTCYKCGGPNHFARDCQA-GNTKCYACGKPGHISKDCHSAAGGSNAG 158
Query: 98 SKRCYACHQAGHMAKEC 114
SK CY C ++GH+++EC
Sbjct: 159 SKTCYNCGKSGHISREC 175
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 12/60 (20%)
Query: 99 KRCYACHQAGHMAKEC------------PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY C +AGH+A +C PG +G PEP S CY CG GH+ +C
Sbjct: 7 RTCYKCGEAGHVADDCTQEERLCYNCRKPGHESGDCPEPKQTTSKQCYSCGDVGHIQTEC 66
>gi|410079168|ref|XP_003957165.1| hypothetical protein KAFR_0D03820 [Kazachstania africana CBS 2517]
gi|372463750|emb|CCF58030.1| hypothetical protein KAFR_0D03820 [Kazachstania africana CBS 2517]
Length = 159
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 27/129 (20%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC---------- 52
+ S QCYNC + GH Q C + CY CN GH +R+C
Sbjct: 44 TVSNKQCYNCGETGHIQSECTVQR------------CYNCNEVGHISRDCDQPKRFNNNN 91
Query: 53 ---ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR-CYACHQAG 108
++CY C G H+AKDC + + CY C GH A++C D +++ CY C++AG
Sbjct: 92 NKRFNSRLSCYKCGGPNHMAKDCR-SAEVKCYTCGRFGHVAKDCSADPNEKVCYKCNEAG 150
Query: 109 HMAKECPGQ 117
H++++CP Q
Sbjct: 151 HISRDCPAQ 159
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCP 94
CY C GH A +C +E + CYNC+ GHV +CT ++ CYNC +GH C
Sbjct: 6 ACYICGKLGHLAEDCDSEKL-CYNCNKPGHVQSECTEPRTVSNKQCYNCGETGHIQSEC- 63
Query: 95 NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMS-LTCYVCGHQGHLSYDCKLVQ 150
+ +RCY C++ GH++++C + S L+CY CG H++ DC+ +
Sbjct: 64 --TVQRCYNCNEVGHISRDCDQPKRFNNNNNKRFNSRLSCYKCGGPNHMAKDCRSAE 118
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 64/150 (42%), Gaps = 31/150 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH Q C + + + CY C GH EC + CYNC+ GH+
Sbjct: 26 CYNCNKPGHVQSECTEPRTVSNK------QCYNCGETGHIQSECTVQR--CYNCNEVGHI 77
Query: 69 AKDC------------TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
++DC S + CY C H A++C + +CY C + GH+AK+C
Sbjct: 78 SRDCDQPKRFNNNNNKRFNSRLSCYKCGGPNHMAKDC-RSAEVKCYTCGRFGHVAKDCSA 136
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
K CY C GH+S DC
Sbjct: 137 DPNEK----------VCYKCNEAGHISRDC 156
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 1 MSSTSTIQ-CYNCFDFGHYQYSCPQKSSADARGDKVG---IVCYKCNNYGHFARECATES 56
+ S T+Q CYNC + GH C Q + +K + CYKC H A++C +
Sbjct: 59 IQSECTVQRCYNCNEVGHISRDCDQPKRFNNNNNKRFNSRLSCYKCGGPNHMAKDCRSAE 118
Query: 57 VTCYNCSGQGHVAKDCTVK-SSIICYNCNSSGHFARNCP 94
V CY C GHVAKDC+ + +CY CN +GH +R+CP
Sbjct: 119 VKCYTCGRFGHVAKDCSADPNEKVCYKCNEAGHISRDCP 157
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 74 VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTC 133
+ S CY C GH A +C DS K CY C++ GH+ EC EP + C
Sbjct: 1 MSSQKACYICGKLGHLAEDC--DSEKLCYNCNKPGHVQSEC--------TEPRTVSNKQC 50
Query: 134 YVCGHQGHLSYDCKL 148
Y CG GH+ +C +
Sbjct: 51 YNCGETGHIQSECTV 65
>gi|402077536|gb|EJT72885.1| zinc finger protein GIS2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 259
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 81/206 (39%), Gaps = 74/206 (35%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TES 56
MSS S CY C + GHY C SSA+ +CY C GH + C TE+
Sbjct: 33 MSSLSRRACYKCGNVGHYAEVC---SSAER-------LCYNCKQPGHESNGCPLPRTTEA 82
Query: 57 VTCYNCSGQGHVAKDC-TVKSSII-----CYNCNSSGHFARNCPNDS------------- 97
CY+C G GHV DC T++ S CYNC GH AR CPN +
Sbjct: 83 KQCYHCQGLGHVQADCPTLRLSGAGAGGRCYNCGQPGHLARACPNPAGANMGRGAPVPRG 142
Query: 98 -------------------------------------SKRCYACHQAGHMAKECPGQTAG 120
+ +CYAC + GH++++C G
Sbjct: 143 GFTGGFPQRGGFAGGPRPATCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGG 202
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDC 146
P+ TCY CG GH+S DC
Sbjct: 203 ----PLNTAGKTCYQCGEAGHISRDC 224
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 61/138 (44%), Gaps = 28/138 (20%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + + CY+C GH +CP
Sbjct: 40 ACYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQADCP 99
Query: 95 N------DSSKRCYACHQAGHMAKECP---GQTAGK-SPEPVVDMS-------------- 130
+ RCY C Q GH+A+ CP G G+ +P P +
Sbjct: 100 TLRLSGAGAGGRCYNCGQPGHLARACPNPAGANMGRGAPVPRGGFTGGFPQRGGFAGGPR 159
Query: 131 -LTCYVCGHQGHLSYDCK 147
TCY CG H + DC+
Sbjct: 160 PATCYKCGGPNHFARDCQ 177
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 28/119 (23%)
Query: 8 QCYNCFDFGHYQYSCPQKSSAD-------ARGDKVG--------------IVCYKCNNYG 46
+CYNC GH +CP + A+ RG G CYKC
Sbjct: 111 RCYNCGQPGHLARACPNPAGANMGRGAPVPRGGFTGGFPQRGGFAGGPRPATCYKCGGPN 170
Query: 47 HFARECATESVTCYNCSGQGHVAKDCTVK-------SSIICYNCNSSGHFARNCPNDSS 98
HFAR+C +++ CY C GH+++DCT + CY C +GH +R+CP ++
Sbjct: 171 HFARDCQAQAMKCYACGKLGHISRDCTAPNGGPLNTAGKTCYQCGEAGHISRDCPQKNA 229
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S CY C + GH+A C + + + CY C Q GH + CP P + CY
Sbjct: 37 SRRACYKCGNVGHYAEVC-SSAERLCYNCKQPGHESNGCP--------LPRTTEAKQCYH 87
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ DC ++ S
Sbjct: 88 CQGLGHVQADCPTLRLS 104
>gi|225710824|gb|ACO11258.1| DNA-binding protein HEXBP [Caligus rogercresseyi]
Length = 220
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
IQC+ C +FGH ++CPQKSS+ A K I C+KC +YGH + C V N G+
Sbjct: 86 IQCHVCQEFGHLSFACPQKSSSSAA--KADIQCFKCKDYGHISFACPKTEVAKGNAFGEE 143
Query: 67 H--VAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQT 118
+ V ++ CYNCN GH + CP +CY C++ GH + +C T
Sbjct: 144 NKPVPGKGKYGKNLTCYNCNEIGHVSNECPQI---QCYKCYEYGHFSSKCKNVT 194
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYN 61
++ + IQC+ C D+GH ++CP+ + A+G+ G G + + ++TCYN
Sbjct: 109 AAKADIQCFKCKDYGHISFACPK--TEVAKGNAFGEENKPVPGKGKYGK-----NLTCYN 161
Query: 62 CSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
C+ GHV+ +C I CY C GHF+ C N
Sbjct: 162 CNEIGHVSNECP---QIQCYKCYEYGHFSSKCKN 192
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSK-------RCYACHQAGHMAKECP------GQTAGK 121
K I C+ C GH + CP SS +C+ C GH++ CP G G+
Sbjct: 83 KKKIQCHVCQEFGHLSFACPQKSSSSAAKADIQCFKCKDYGHISFACPKTEVAKGNAFGE 142
Query: 122 SPEPV-----VDMSLTCYVCGHQGHLSYDCKLVQ 150
+PV +LTCY C GH+S +C +Q
Sbjct: 143 ENKPVPGKGKYGKNLTCYNCNEIGHVSNECPQIQ 176
>gi|294933509|ref|XP_002780741.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239890797|gb|EER12536.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 315
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 72/184 (39%), Gaps = 51/184 (27%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIV--------------------CYKCN 43
T+ I C C GH CP GD+V +V C C
Sbjct: 24 TNDIVCNKCLKPGHKVADCPMLRE----GDEVTMVDEEEEEEDRAFEFDSGAKDYCLNCK 79
Query: 44 NYGHFARECATESVTCYNCSGQGHVAKDC---------------------TVKSSIICYN 82
YGHFAR+C E V C C +GH+A +C + IC N
Sbjct: 80 GYGHFARDCPNEPV-CNACGMEGHIAVNCPRARRGFSRGRSPSREAKFDRALIDEEICLN 138
Query: 83 CNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHL 142
C GH R+CPN+ C C AGH A ECP G+ P CY+CG GH+
Sbjct: 139 CKRPGHVFRDCPNEIV--CNKCGGAGHKAYECP---QGEDRSPRKRSQKDCYICGELGHI 193
Query: 143 SYDC 146
+ +C
Sbjct: 194 ASEC 197
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 5 STIQCYNCFDFGHYQYSCP--------------------QKSSADARGDKVGIVCYKCNN 44
S CY C + GH CP ++S+ AR +CY C+
Sbjct: 180 SQKDCYICGELGHIASECPNRDQQRPREGRLTSRWAKNEDRASSWARASADDELCYNCHQ 239
Query: 45 YGHFARECATESVTCYNCSGQGHVAKDCTVKSS------IICYNCNSSGHFARNCPNDSS 98
GH AR+C + C NC +GH+A+DC +C NC +GH +R+C N
Sbjct: 240 RGHKARDCKNRPI-CRNCHREGHIAQDCLASRGDAPSEHTVCRNCRQTGHLSRDCHNPPV 298
Query: 99 KRCYACHQAGHMAKEC 114
C C++ GH A C
Sbjct: 299 --CNRCNKVGHKAAAC 312
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 60/151 (39%), Gaps = 17/151 (11%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-ESVTCYNCS 63
+ I C C GH Y CPQ R + CY C GH A EC +
Sbjct: 151 NEIVCNKCGGAGHKAYECPQGEDRSPR-KRSQKDCYICGELGHIASECPNRDQQRPREGR 209
Query: 64 GQGHVAKDCTVKSSI--------ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
AK+ SS +CYNC+ GH AR+C N C CH+ GH+A++C
Sbjct: 210 LTSRWAKNEDRASSWARASADDELCYNCHQRGHKARDCKNRPI--CRNCHREGHIAQDCL 267
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
E V C C GHLS DC
Sbjct: 268 ASRGDAPSEHTV-----CRNCRQTGHLSRDC 293
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 58/145 (40%), Gaps = 38/145 (26%)
Query: 37 IVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTV---------------------- 74
++C C GH R+C T + C C GH DC +
Sbjct: 8 VMCLNCKEMGHRTRDC-TNDIVCNKCLKPGHKVADCPMLREGDEVTMVDEEEEEEDRAFE 66
Query: 75 ---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP----GQTAGKSP--EP 125
+ C NC GHFAR+CPN+ C AC GH+A CP G + G+SP E
Sbjct: 67 FDSGAKDYCLNCKGYGHFARDCPNEPV--CNACGMEGHIAVNCPRARRGFSRGRSPSREA 124
Query: 126 VVDMSL----TCYVCGHQGHLSYDC 146
D +L C C GH+ DC
Sbjct: 125 KFDRALIDEEICLNCKRPGHVFRDC 149
>gi|259485495|tpe|CBF82565.1| TPA: zinc knuckle nucleic acid binding protein, putative
(AFU_orthologue; AFUA_7G02190) [Aspergillus nidulans
FGSC A4]
Length = 233
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 65/152 (42%), Gaps = 41/152 (26%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-------- 54
+T T QCYNC GH Q CP A G CY C+ GH AR C
Sbjct: 46 TTETKQCYNCQGLGHVQADCPTLRLNGANGR-----CYNCSQPGHLARNCPAPASGAPRG 100
Query: 55 --------------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC- 93
+ TCY C G H A+DC + ++ CY C GH +R+C
Sbjct: 101 TGAPRGGFGGGFRGGYGGYPRAATCYKCGGPNHFARDCQAQ-AMKCYACGKLGHISRDCT 159
Query: 94 -PN-----DSSKRCYACHQAGHMAKECPGQTA 119
PN + K CY C QAGH++++CP A
Sbjct: 160 APNGGPLSSAGKVCYKCSQAGHISRDCPNNEA 191
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 60/134 (44%), Gaps = 25/134 (18%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + CYNC GH +CP
Sbjct: 7 ACYKCGNIGHYAEVCSSSERLCYNCKQPGHESSSCPRPRTTETKQCYNCQGLGHVQADCP 66
Query: 95 ----NDSSKRCYACHQAGHMAKECPGQTAGKSPEPV-----------------VDMSLTC 133
N ++ RCY C Q GH+A+ CP +G +P + TC
Sbjct: 67 TLRLNGANGRCYNCSQPGHLARNCPAPASG-APRGTGAPRGGFGGGFRGGYGGYPRAATC 125
Query: 134 YVCGHQGHLSYDCK 147
Y CG H + DC+
Sbjct: 126 YKCGGPNHFARDCQ 139
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 70/177 (39%), Gaps = 57/177 (32%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TESVTCY 60
S CY C + GHY C S+ R +CY C GH + C TE+ CY
Sbjct: 4 SRRACYKCGNIGHYAEVC----SSSER------LCYNCKQPGHESSSCPRPRTTETKQCY 53
Query: 61 NCSGQGHVAKDCTV----KSSIICYNCNSSGHFARNCPNDSS------------------ 98
NC G GHV DC ++ CYNC+ GH ARNCP +S
Sbjct: 54 NCQGLGHVQADCPTLRLNGANGRCYNCSQPGHLARNCPAPASGAPRGTGAPRGGFGGGFR 113
Query: 99 ---------KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C H A++C Q ++ CY CG GH+S DC
Sbjct: 114 GGYGGYPRAATCYKCGGPNHFARDCQAQ------------AMKCYACGKLGHISRDC 158
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT 58
++CY C GH C + G VCYKC+ GH +R+C T
Sbjct: 143 MKCYACGKLGHISRDCTAPNGGPL--SSAGKVCYKCSQAGHISRDCPNNEAT 192
>gi|396482148|ref|XP_003841407.1| similar to zinc knuckle domain containing protein [Leptosphaeria
maculans JN3]
gi|312217981|emb|CBX97928.1| similar to zinc knuckle domain containing protein [Leptosphaeria
maculans JN3]
Length = 220
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 79/204 (38%), Gaps = 72/204 (35%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATES 56
MSS S C+ C + GHY C S+ R +CY C GH + C TE+
Sbjct: 1 MSSLSRRACFKCGNVGHYAEVC----SSSER------LCYNCKQPGHESNGCPHPRTTET 50
Query: 57 VTCYNCSGQGHVAKDCTV------KSSIICYNCNSSGHFARNCPNDS------------- 97
CY+C G GHV DC +S CY+C SGH ARNCPN
Sbjct: 51 KQCYHCQGLGHVQADCPTLRLSGAGTSGRCYSCGLSGHLARNCPNPGMGGRGVGAPPRGG 110
Query: 98 -----------------------------------SKRCYACHQAGHMAKECPGQTAGKS 122
+ +CYAC + GH++++C G
Sbjct: 111 GFGGGFRGGFAGGARPATCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGG-- 168
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDC 146
P+ TCY CG GH+S DC
Sbjct: 169 --PLNTAGKTCYRCGETGHISRDC 190
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S C+ C + GH+A C + S + CY C Q GH + CP P + CY
Sbjct: 5 SRRACFKCGNVGHYAEVC-SSSERLCYNCKQPGHESNGCP--------HPRTTETKQCYH 55
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ DC ++ S
Sbjct: 56 CQGLGHVQADCPTLRLS 72
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV 57
++CY C GH C + + G CY+C GH +R+CA V
Sbjct: 147 MKCYACGKLGHISRDCTAPNGGPL--NTAGKTCYRCGETGHISRDCAQPEV 195
>gi|336269017|ref|XP_003349270.1| hypothetical protein SMAC_05554 [Sordaria macrospora k-hell]
gi|380089843|emb|CCC12376.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 184
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 68/155 (43%), Gaps = 47/155 (30%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARG----DKVGIV------------------CYKCN 43
+CYNC + GH CP+ +AR + G + CYKC
Sbjct: 30 AAKCYNCGNEGHMSRDCPEGPKDNARTCYRCGQTGHISRDCSQSGGQGGQSSGAECYKCG 89
Query: 44 NYGHFARECAT--------------------ESVTCYNCSGQGHVAKDCTVKSSIICYNC 83
GH AR C+ + TCY+C G GH+++DC S CYNC
Sbjct: 90 EVGHIARNCSKGGAAYGGGFQNSGYGGGFGGPAKTCYSCGGIGHMSRDCVNGSK--CYNC 147
Query: 84 NSSGHFARNCPNDS---SKRCYACHQAGHMAKECP 115
SGHF+R+CP DS K CY C Q GH+ +CP
Sbjct: 148 GESGHFSRDCPKDSGSGEKICYKCQQPGHVQSQCP 182
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 66/168 (39%), Gaps = 52/168 (30%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT----ESVTCYNCSG 64
C+ C H CP K +A CY C N GH +R+C + TCY C
Sbjct: 12 CFTCGQTTHQARDCPNKGAAK---------CYNCGNEGHMSRDCPEGPKDNARTCYRCGQ 62
Query: 65 QGHVAKDCTVKSSII-------CYNCNSSGHFARNCPNDSS------------------- 98
GH+++DC+ CY C GH ARNC +
Sbjct: 63 TGHISRDCSQSGGQGGQSSGAECYKCGEVGHIARNCSKGGAAYGGGFQNSGYGGGFGGPA 122
Query: 99 KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
K CY+C GHM+++C V+ S CY CG GH S DC
Sbjct: 123 KTCYSCGGIGHMSRDC------------VNGS-KCYNCGESGHFSRDC 157
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 53 ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN---DSSKRCYACHQAGH 109
A ++ C+ C H A+DC K + CYNC + GH +R+CP D+++ CY C Q GH
Sbjct: 6 APQARACFTCGQTTHQARDCPNKGAAKCYNCGNEGHMSRDCPEGPKDNARTCYRCGQTGH 65
Query: 110 MAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++++C + CY CG GH++ +C
Sbjct: 66 ISRDCSQSGGQGGQSSGAE----CYKCGEVGHIARNC 98
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 38 VCYKCNNYGHFARECATE-SVTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNC 93
C+ C H AR+C + + CYNC +GH+++DC ++ CY C +GH +R+C
Sbjct: 11 ACFTCGQTTHQARDCPNKGAAKCYNCGNEGHMSRDCPEGPKDNARTCYRCGQTGHISRDC 70
Query: 94 PNDSS-------KRCYACHQAGHMAKECPGQTAG--------KSPEPVVDMSLTCYVCGH 138
CY C + GH+A+ C A + TCY CG
Sbjct: 71 SQSGGQGGQSSGAECYKCGEVGHIARNCSKGGAAYGGGFQNSGYGGGFGGPAKTCYSCGG 130
Query: 139 QGHLSYDC 146
GH+S DC
Sbjct: 131 IGHMSRDC 138
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 43/102 (42%), Gaps = 14/102 (13%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARG----------DKVGIVCYKCNNYGHFARECATES 56
+CY C + GH +C + +A G CY C GH +R+C S
Sbjct: 83 AECYKCGEVGHIARNCSKGGAAYGGGFQNSGYGGGFGGPAKTCYSCGGIGHMSRDCVNGS 142
Query: 57 VTCYNCSGQGHVAKDCTVKS---SIICYNCNSSGHFARNCPN 95
CYNC GH ++DC S ICY C GH CP+
Sbjct: 143 -KCYNCGESGHFSRDCPKDSGSGEKICYKCQQPGHVQSQCPS 183
>gi|343427250|emb|CBQ70778.1| related to GIS2-Putative zinc finger protein, proposed to be
involved in the RAS/cAMP signaling pathway [Sporisorium
reilianum SRZ2]
Length = 180
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 62/144 (43%), Gaps = 21/144 (14%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTCYNCSG 64
CY C GH +C S D R C+ C GH + C TE+ CYNC G
Sbjct: 7 CYVCGQLGHLAENC---SFTDRR-------CFNCLEAGHESSACPAPRTTETKQCYNCGG 56
Query: 65 QGHVAKDCTVKSSIICYNCNSSGHFARNCPN-DSSKRCYACHQAGHMAKECPGQTAGKSP 123
+GH+ DC + CY C GH NCP D K+C+ C GH+ C +G
Sbjct: 57 KGHIKADCPTIDTQECYGCGGKGHVKANCPTVDREKKCFGCGGTGHVRANCATVRSGGR- 115
Query: 124 EPVVDMSLTCYVCGHQGHLSYDCK 147
LTC CG H + DCK
Sbjct: 116 -----AGLTCRKCGGPNHFARDCK 134
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 64/143 (44%), Gaps = 27/143 (18%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT--ESVTCY 60
+T T QCYNC GH + CP + + CY C GH C T C+
Sbjct: 45 TTETKQCYNCGGKGHIKADCPTIDTQE---------CYGCGGKGHVKANCPTVDREKKCF 95
Query: 61 NCSGQGHVAKDC-TVKSS----IICYNCNSSGHFARNCPNDSS------KRCYACHQAGH 109
C G GHV +C TV+S + C C HFAR+C D + K CY C+Q GH
Sbjct: 96 GCGGTGHVRANCATVRSGGRAGLTCRKCGGPNHFARDCKADGAANGVKAKTCYTCNQTGH 155
Query: 110 MAKECP-----GQTAGKSPEPVV 127
+A+ CP G G +P +
Sbjct: 156 IARLCPQAPVEGSVPGTNPTAAL 178
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCPN 95
CY C GH A C+ C+NC GH + C + CYNC GH +CP
Sbjct: 7 CYVCGQLGHLAENCSFTDRRCFNCLEAGHESSACPAPRTTETKQCYNCGGKGHIKADCPT 66
Query: 96 DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
++ CY C GH+ CP VD C+ CG GH+ +C V+
Sbjct: 67 IDTQECYGCGGKGHVKANCP----------TVDREKKCFGCGGTGHVRANCATVR 111
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 15/97 (15%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP---NDSSKRCYACHQAGHMAKECP 115
CY C GH+A++C+ + C+NC +GH + CP +K+CY C GH+ +CP
Sbjct: 7 CYVCGQLGHLAENCSF-TDRRCFNCLEAGHESSACPAPRTTETKQCYNCGGKGHIKADCP 65
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
+D + CY CG +GH+ +C V +
Sbjct: 66 ----------TID-TQECYGCGGKGHVKANCPTVDRE 91
>gi|326476591|gb|EGE00601.1| zinc knuckle domain-containing protein [Trichophyton tonsurans CBS
112818]
gi|326483934|gb|EGE07944.1| zinc knuckle domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 208
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
+T T QCY+C GH Q CP + G CY CN GH AR C + + N
Sbjct: 15 TTETKQCYHCQGLGHVQADCP---TLRLNGGASNARCYSCNLPGHLARNCPSGGIQQQNP 71
Query: 63 SG------------QGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
G + CY C HFAR+C + +CYAC + GH+
Sbjct: 72 QAVRNAGSTRGGFNAGFRGGPAGYPRAATCYKCGGPNHFARDC-QAQAMKCYACGKLGHI 130
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+++C G P+ + CY C GH+S DC
Sbjct: 131 SRDCTAPNGG----PLSSVGKVCYKCSQAGHISRDC 162
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 30/125 (24%)
Query: 5 STIQCYNCFDFGHYQYSCPQKS-------------------SADARGDKVG----IVCYK 41
S +CY+C GH +CP +A RG G CYK
Sbjct: 44 SNARCYSCNLPGHLARNCPSGGIQQQNPQAVRNAGSTRGGFNAGFRGGPAGYPRAATCYK 103
Query: 42 CNNYGHFARECATESVTCYNCSGQGHVAKDCTVK-----SSI--ICYNCNSSGHFARNCP 94
C HFAR+C +++ CY C GH+++DCT SS+ +CY C+ +GH +R+CP
Sbjct: 104 CGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGGPLSSVGKVCYKCSQAGHISRDCP 163
Query: 95 NDSSK 99
++ +
Sbjct: 164 TNNPE 168
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 52/135 (38%), Gaps = 50/135 (37%)
Query: 50 RECATESVTCYNCSGQGHVAKDCTV------KSSIICYNCNSSGHFARNCP--------- 94
R TE+ CY+C G GHV DC S+ CY+CN GH ARNCP
Sbjct: 12 RPRTTETKQCYHCQGLGHVQADCPTLRLNGGASNARCYSCNLPGHLARNCPSGGIQQQNP 71
Query: 95 ----NDSSKR-------------------CYACHQAGHMAKECPGQTAGKSPEPVVDMSL 131
N S R CY C H A++C Q ++
Sbjct: 72 QAVRNAGSTRGGFNAGFRGGPAGYPRAATCYKCGGPNHFARDCQAQ------------AM 119
Query: 132 TCYVCGHQGHLSYDC 146
CY CG GH+S DC
Sbjct: 120 KCYACGKLGHISRDC 134
>gi|405965019|gb|EKC30448.1| Putative ATP-dependent RNA helicase DDX4 [Crassostrea gigas]
Length = 779
Score = 75.5 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 44/99 (44%), Gaps = 22/99 (22%)
Query: 39 CYKCNNYGHFAREC--------ATESVTCYNCSGQGHVAKDCTVKSSII-------CYNC 83
C C GHFAREC C NC +GH A++C C NC
Sbjct: 178 CRNCGEEGHFARECPEPRKGGGGGGDKGCRNCGEEGHFARECPEPRKGGGGGGDRGCRNC 237
Query: 84 NSSGHFARNCPNDSSK-------RCYACHQAGHMAKECP 115
GHFAR CPN + +C+ C + GHMA++CP
Sbjct: 238 GEEGHFARECPNPKKEGGGGGGGKCFKCQEEGHMARDCP 276
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 42/102 (41%), Gaps = 18/102 (17%)
Query: 59 CYNCSGQGHVAKDC-------TVKSSIICYNCNSSGHFARNCPN-------DSSKRCYAC 104
C NC +GH A++C C NC GHFAR CP + C C
Sbjct: 178 CRNCGEEGHFARECPEPRKGGGGGGDKGCRNCGEEGHFARECPEPRKGGGGGGDRGCRNC 237
Query: 105 HQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ GH A+ECP E C+ C +GH++ DC
Sbjct: 238 GEEGHFARECPN----PKKEGGGGGGGKCFKCQEEGHMARDC 275
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 41/102 (40%), Gaps = 17/102 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--------ATESVTCY 60
C NC + GH+ CP+ G C C GHFAREC C
Sbjct: 178 CRNCGEEGHFARECPEPRKGGGGGGDK--GCRNCGEEGHFARECPEPRKGGGGGGDRGCR 235
Query: 61 NCSGQGHVAKDC-------TVKSSIICYNCNSSGHFARNCPN 95
NC +GH A++C C+ C GH AR+CPN
Sbjct: 236 NCGEEGHFARECPNPKKEGGGGGGGKCFKCQEEGHMARDCPN 277
>gi|241955521|ref|XP_002420481.1| zinc finger protein, putative [Candida dubliniensis CD36]
gi|223643823|emb|CAX41560.1| zinc finger protein, putative [Candida dubliniensis CD36]
Length = 175
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 70/157 (44%), Gaps = 31/157 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES--VTCYNCSGQG 66
CYNC GH CP A+ CY C + GH EC ++ CYNC G
Sbjct: 29 CYNCHKPGHESNDCPDPKQNTAK------QCYSCGDVGHIQTECPNQAQGAKCYNCGQFG 82
Query: 67 HVAKDCTVK-----------------SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
H++K+C S CY C HFAR+C ++ K CYAC + GH
Sbjct: 83 HISKNCDAAPSSTDHAPSFKRSSGRASGTTCYKCGGPNHFARDCQANTVK-CYACGKVGH 141
Query: 110 MAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++K+C G + + TCY CG GH+S +C
Sbjct: 142 ISKDCHSAAGGSNFS-----AKTCYNCGKSGHISKEC 173
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCP 94
CYKC GH A +C E CYNC GH + DC ++ CY+C GH CP
Sbjct: 8 TCYKCGEVGHLADDCQQEERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTECP 67
Query: 95 NDS-SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMS------LTCYVCGHQGHLSYDCK 147
N + +CY C Q GH++K C + P S TCY CG H + DC+
Sbjct: 68 NQAQGAKCYNCGQFGHISKNCDAAPSSTDHAPSFKRSSGRASGTTCYKCGGPNHFARDCQ 127
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 33/131 (25%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--------------- 52
QCY+C D GH Q CP ++ G CY C +GH ++ C
Sbjct: 52 QCYSCGDVGHIQTECPNQAQ--------GAKCYNCGQFGHISKNCDAAPSSTDHAPSFKR 103
Query: 53 ---ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC------PNDSSKRCYA 103
TCY C G H A+DC +++ CY C GH +++C N S+K CY
Sbjct: 104 SSGRASGTTCYKCGGPNHFARDCQA-NTVKCYACGKVGHISKDCHSAAGGSNFSAKTCYN 162
Query: 104 CHQAGHMAKEC 114
C ++GH++KEC
Sbjct: 163 CGKSGHISKEC 173
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN---DSSKRCYACHQAGHMAKEC 114
TCY C GH+A DC + +CYNC+ GH + +CP+ +++K+CY+C GH+ EC
Sbjct: 8 TCYKCGEVGHLADDCQ-QEERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTEC 66
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
P Q G CY CG GH+S +C S
Sbjct: 67 PNQAQG----------AKCYNCGQFGHISKNCDAAPSS 94
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 12/60 (20%)
Query: 99 KRCYACHQAGHMAKEC------------PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY C + GH+A +C PG + P+P + + CY CG GH+ +C
Sbjct: 7 RTCYKCGEVGHLADDCQQEERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTEC 66
>gi|317155980|ref|XP_003190667.1| zinc knuckle nucleic acid binding protein [Aspergillus oryzae
RIB40]
Length = 237
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 65/152 (42%), Gaps = 41/152 (26%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-------- 54
+T T QCYNC GH Q CP A G CY C+ GH AR C
Sbjct: 46 TTETKQCYNCQGLGHVQADCPTLRLNGANGR-----CYNCSQPGHLARNCPAPASGAGRG 100
Query: 55 --------------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC- 93
+ TCY C G H A+DC + ++ CY C GH +R+C
Sbjct: 101 VGAPRGGYNGGFRGGYGGYPRAATCYKCGGPNHFARDCQAQ-AMKCYACGKLGHISRDCT 159
Query: 94 -PN-----DSSKRCYACHQAGHMAKECPGQTA 119
PN + K CY C QAGH++++CP A
Sbjct: 160 APNGGPLSSAGKVCYKCAQAGHISRDCPNNEA 191
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 23/133 (17%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + CYNC GH +CP
Sbjct: 7 ACYKCGNIGHYAEVCSSSERLCYNCKQPGHESSSCPRPRTTETKQCYNCQGLGHVQADCP 66
Query: 95 ----NDSSKRCYACHQAGHMAKECPGQTAGK-----SPE-----------PVVDMSLTCY 134
N ++ RCY C Q GH+A+ CP +G +P + TCY
Sbjct: 67 TLRLNGANGRCYNCSQPGHLARNCPAPASGAGRGVGAPRGGYNGGFRGGYGGYPRAATCY 126
Query: 135 VCGHQGHLSYDCK 147
CG H + DC+
Sbjct: 127 KCGGPNHFARDCQ 139
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 70/177 (39%), Gaps = 57/177 (32%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TESVTCY 60
S CY C + GHY C S+ R +CY C GH + C TE+ CY
Sbjct: 4 SRRACYKCGNIGHYAEVC----SSSER------LCYNCKQPGHESSSCPRPRTTETKQCY 53
Query: 61 NCSGQGHVAKDCTV----KSSIICYNCNSSGHFARNCPNDSS------------------ 98
NC G GHV DC ++ CYNC+ GH ARNCP +S
Sbjct: 54 NCQGLGHVQADCPTLRLNGANGRCYNCSQPGHLARNCPAPASGAGRGVGAPRGGYNGGFR 113
Query: 99 ---------KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C H A++C Q ++ CY CG GH+S DC
Sbjct: 114 GGYGGYPRAATCYKCGGPNHFARDCQAQ------------AMKCYACGKLGHISRDC 158
>gi|238498920|ref|XP_002380695.1| zinc knuckle nucleic acid binding protein, putative [Aspergillus
flavus NRRL3357]
gi|220693969|gb|EED50314.1| zinc knuckle nucleic acid binding protein, putative [Aspergillus
flavus NRRL3357]
Length = 238
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 65/152 (42%), Gaps = 41/152 (26%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-------- 54
+T T QCYNC GH Q CP A G CY C+ GH AR C
Sbjct: 46 TTETKQCYNCQGLGHVQADCPTLRLNGANGR-----CYNCSQPGHLARNCPAPASGAGRG 100
Query: 55 --------------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC- 93
+ TCY C G H A+DC + ++ CY C GH +R+C
Sbjct: 101 VGAPRGGYNGGFRGGYGGYPRAATCYKCGGPNHFARDCQAQ-AMKCYACGKLGHISRDCT 159
Query: 94 -PN-----DSSKRCYACHQAGHMAKECPGQTA 119
PN + K CY C QAGH++++CP A
Sbjct: 160 APNGGPLSSAGKVCYKCAQAGHISRDCPNNEA 191
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 23/133 (17%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + CYNC GH +CP
Sbjct: 7 ACYKCGNIGHYAEVCSSSERLCYNCKQPGHESSSCPRPRTTETKQCYNCQGLGHVQADCP 66
Query: 95 ----NDSSKRCYACHQAGHMAKECPGQTAGK-----SPE-----------PVVDMSLTCY 134
N ++ RCY C Q GH+A+ CP +G +P + TCY
Sbjct: 67 TLRLNGANGRCYNCSQPGHLARNCPAPASGAGRGVGAPRGGYNGGFRGGYGGYPRAATCY 126
Query: 135 VCGHQGHLSYDCK 147
CG H + DC+
Sbjct: 127 KCGGPNHFARDCQ 139
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 70/177 (39%), Gaps = 57/177 (32%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TESVTCY 60
S CY C + GHY C S+ R +CY C GH + C TE+ CY
Sbjct: 4 SRRACYKCGNIGHYAEVC----SSSER------LCYNCKQPGHESSSCPRPRTTETKQCY 53
Query: 61 NCSGQGHVAKDCTV----KSSIICYNCNSSGHFARNCPNDSS------------------ 98
NC G GHV DC ++ CYNC+ GH ARNCP +S
Sbjct: 54 NCQGLGHVQADCPTLRLNGANGRCYNCSQPGHLARNCPAPASGAGRGVGAPRGGYNGGFR 113
Query: 99 ---------KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C H A++C Q ++ CY CG GH+S DC
Sbjct: 114 GGYGGYPRAATCYKCGGPNHFARDCQAQ------------AMKCYACGKLGHISRDC 158
>gi|255947154|ref|XP_002564344.1| Pc22g03000 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591361|emb|CAP97588.1| Pc22g03000 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 487
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 71/148 (47%), Gaps = 19/148 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CYNCSG 64
+C NC + GH SC ++ AD D+ I C C+ GH R+C + C NC
Sbjct: 280 KCLNCGELGHISRSC-KEERADG-NDRTEIKCSNCDGVGHRVRDCRQQRRNKHGCRNCGS 337
Query: 65 QGHVAKDCTVKSS---IICYNCNSSGHFARNCPN--DSSKR-CYACHQAGHMAKECPGQT 118
H+A +CT S + C CN +GHFA++CPN D R C C H+A++C
Sbjct: 338 VEHIASECTEPRSAADVECRKCNETGHFAKDCPNVADRGPRTCRNCGSEDHIARDC---- 393
Query: 119 AGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+P ++TC C GH S DC
Sbjct: 394 ----DQPRDVSTVTCRNCEKTGHYSRDC 417
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES----VTCYNCSG 64
C NC H C + SA + C KCN GHFA++C + TC NC
Sbjct: 332 CRNCGSVEHIASECTEPRSA------ADVECRKCNETGHFAKDCPNVADRGPRTCRNCGS 385
Query: 65 QGHVAKDCTVK---SSIICYNCNSSGHFARNC--PNDSSK-RCYACHQAGHMAKECPGQT 118
+ H+A+DC S++ C NC +GH++R+C P D SK +C C + GH C Q
Sbjct: 386 EDHIARDCDQPRDVSTVTCRNCEKTGHYSRDCDQPKDWSKVQCKNCGEMGHTVVRC-RQP 444
Query: 119 AGKSPE 124
K P+
Sbjct: 445 KDKDPQ 450
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 38/88 (43%), Gaps = 11/88 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSGQ 65
CYNC GH + CP+ K G C+ C GH EC V TC C +
Sbjct: 67 CYNCGQEGHSKAECPEPR-------KTG-SCFNCGQEGHSKSECTKPRVFKGTCRICEKE 118
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNC 93
GH A DC + +C NC + GH C
Sbjct: 119 GHPAVDCPERPPDVCKNCQTEGHKTMEC 146
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Query: 38 VCYKCNNYGHFARECATESVT--CYNCSGQGHVAKDCTVKSSI--ICYNCNSSGHFARNC 93
CY C GH EC T C+NC +GH +CT C C GH A +C
Sbjct: 66 ACYNCGQEGHSKAECPEPRKTGSCFNCGQEGHSKSECTKPRVFKGTCRICEKEGHPAVDC 125
Query: 94 PNDSSKRCYACHQAGHMAKEC 114
P C C GH EC
Sbjct: 126 PERPPDVCKNCQTEGHKTMEC 146
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 52/152 (34%), Gaps = 47/152 (30%)
Query: 36 GIVCYKCNNYGHFARECATESV---------------------------------TCYNC 62
G C +C GH R+C +SV CYNC
Sbjct: 11 GFTCGQCGKPGHMTRQCPNDSVPLGARDSNAGNAYGNYNDGNGGGYGEYAGGGGRACYNC 70
Query: 63 SGQGHVAKDC-TVKSSIICYNCNSSGHFARNC--PNDSSKRCYACHQAGHMAKECPGQTA 119
+GH +C + + C+NC GH C P C C + GH A +CP +
Sbjct: 71 GQEGHSKAECPEPRKTGSCFNCGQEGHSKSECTKPRVFKGTCRICEKEGHPAVDCPERPP 130
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
C C +GH + +CK +K
Sbjct: 131 D-----------VCKNCQTEGHKTMECKENRK 151
>gi|357467427|ref|XP_003603998.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355493046|gb|AES74249.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 267
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 11/116 (9%)
Query: 31 RGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFA 90
RG +C C GH+ REC +V C+NCS GH+A +C+ KS +C+NC GH A
Sbjct: 48 RGFSQDNLCKNCKRPGHYVRECPNVAV-CHNCSLPGHIASECSTKS--LCWNCKEPGHMA 104
Query: 91 RNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+CPN+ C+ C +AGH A+EC T + P + + CY QGH++ +C
Sbjct: 105 SSCPNEGI--CHTCGKAGHRAREC---TVPQKPPGDLRLCNNCY---KQGHIAVEC 152
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 73/160 (45%), Gaps = 32/160 (20%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------ES 56
ST ++ C+NC + GH SCP + +C+ C GH AREC +
Sbjct: 89 STKSL-CWNCKEPGHMASSCPNEG-----------ICHTCGKAGHRARECTVPQKPPGDL 136
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
C NC QGH+A +CT + + C NC +GH AR+CPND C C+ +GH+A++CP
Sbjct: 137 RLCNNCYKQGHIAVECTNEKA--CNNCRKTGHLARDCPNDPI--CNLCNISGHVARQCPK 192
Query: 117 QTAGKSPEPVVD----------MSLTCYVCGHQGHLSYDC 146
+ C C GH+S DC
Sbjct: 193 SNVIGDRGGGGSLRGGYRDGGFRDVVCRSCQQFGHMSRDC 232
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 67/161 (41%), Gaps = 43/161 (26%)
Query: 9 CYNCFDFGHYQYSC--PQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
C+ C GH C PQK D R +C C GH A EC E C NC G
Sbjct: 113 CHTCGKAGHRARECTVPQKPPGDLR------LCNNCYKQGHIAVECTNEKA-CNNCRKTG 165
Query: 67 HVAKDCTVKSSIICYNCNSSGHFARNCPN------------------DSSKR---CYACH 105
H+A+DC + IC CN SGH AR CP D R C +C
Sbjct: 166 HLARDCP--NDPICNLCNISGHVARQCPKSNVIGDRGGGGSLRGGYRDGGFRDVVCRSCQ 223
Query: 106 QAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
Q GHM+++C G + C CG +GH +Y+C
Sbjct: 224 QFGHMSRDCMGGPL-----------MICQNCGGRGHQAYEC 253
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 66/143 (46%), Gaps = 32/143 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NC GHY CP + VC+ C+ GH A EC+T+S+ C+NC GH+
Sbjct: 56 CKNCKRPGHYVRECPNVA-----------VCHNCSLPGHIASECSTKSL-CWNCKEPGHM 103
Query: 69 AKDCTVKSSIICYNCNSSGHFARNC-----PNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
A C + IC+ C +GH AR C P + C C++ GH+A EC + A
Sbjct: 104 ASSCPNEG--ICHTCGKAGHRARECTVPQKPPGDLRLCNNCYKQGHIAVECTNEKA---- 157
Query: 124 EPVVDMSLTCYVCGHQGHLSYDC 146
C C GHL+ DC
Sbjct: 158 ---------CNNCRKTGHLARDC 171
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 45 YGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYAC 104
Y +R ++ C NC GH ++C + +C+NC+ GH A C S C+ C
Sbjct: 42 YRRDSRRGFSQDNLCKNCKRPGHYVRECP--NVAVCHNCSLPGHIASECSTKSL--CWNC 97
Query: 105 HQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
+ GHMA CP + C+ CG GH + +C + QK
Sbjct: 98 KEPGHMASSCPNEG-------------ICHTCGKAGHRARECTVPQK 131
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 40/113 (35%), Gaps = 33/113 (29%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT--------- 54
T+ C NC GH CP +C CN GH AR+C
Sbjct: 153 TNEKACNNCRKTGHLARDCPNDP-----------ICNLCNISGHVARQCPKSNVIGDRGG 201
Query: 55 -------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
V C +C GH+++DC +IC NC GH A CP
Sbjct: 202 GGSLRGGYRDGGFRDVVCRSCQQFGHMSRDCMGGPLMICQNCGGRGHQAYECP 254
>gi|367012391|ref|XP_003680696.1| hypothetical protein TDEL_0C05960 [Torulaspora delbrueckii]
gi|359748355|emb|CCE91485.1| hypothetical protein TDEL_0C05960 [Torulaspora delbrueckii]
Length = 157
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 7/112 (6%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCP 94
CY C GH A EC +E + CYNC+ GHV DCT+ ++ CYNC +GH C
Sbjct: 5 ACYVCGKIGHLAEECDSERL-CYNCNQPGHVQSDCTLPRTVEHKQCYNCGETGHVKTEC- 62
Query: 95 NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ +RCY C+Q GH+++EC + ++CY CG H++ DC
Sbjct: 63 --AIQRCYNCNQTGHISRECTEEKKYPPSSSSRSSKVSCYRCGGPNHMAKDC 112
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 26/121 (21%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES----------- 56
QCYNC + GH + C + CY CN GH +REC E
Sbjct: 48 QCYNCGETGHVKTECAIQR------------CYNCNQTGHISRECTEEKKYPPSSSSRSS 95
Query: 57 -VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKEC 114
V+CY C G H+AKDC ++S CY+C + GH +++CP+ ++ CY C++ GH++++C
Sbjct: 96 KVSCYRCGGPNHMAKDC-LQSGSKCYSCGTFGHLSKDCPSGPGEKICYNCNETGHISRDC 154
Query: 115 P 115
P
Sbjct: 155 P 155
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 68/151 (45%), Gaps = 30/151 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH Q C + + + CY C GH ECA + CYNC+ GH+
Sbjct: 25 CYNCNQPGHVQSDCTLPRTVEHK------QCYNCGETGHVKTECAIQR--CYNCNQTGHI 76
Query: 69 AKDCTVKSS-----------IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
+++CT + + CY C H A++C SK CY+C GH++K+CP
Sbjct: 77 SRECTEEKKYPPSSSSRSSKVSCYRCGGPNHMAKDCLQSGSK-CYSCGTFGHLSKDCPSG 135
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
K CY C GH+S DC +
Sbjct: 136 PGEK----------ICYNCNETGHISRDCPV 156
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 60/153 (39%), Gaps = 41/153 (26%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTCYNCSG 64
CY C GH C + +CY CN GH +C E CYNC
Sbjct: 6 CYVCGKIGHLAEECDSER-----------LCYNCNQPGHVQSDCTLPRTVEHKQCYNCGE 54
Query: 65 QGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS-----------KRCYACHQAGHMAKE 113
GHV +C ++ CYNCN +GH +R C + CY C HMAK+
Sbjct: 55 TGHVKTECAIQR---CYNCNQTGHISRECTEEKKYPPSSSSRSSKVSCYRCGGPNHMAKD 111
Query: 114 CPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C + CY CG GHLS DC
Sbjct: 112 C------------LQSGSKCYSCGTFGHLSKDC 132
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 12/69 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT--ESVTCYNCSGQ 65
CY C H C Q S CY C +GH +++C + CYNC+
Sbjct: 98 SCYRCGGPNHMAKDCLQSGSK----------CYSCGTFGHLSKDCPSGPGEKICYNCNET 147
Query: 66 GHVAKDCTV 74
GH+++DC V
Sbjct: 148 GHISRDCPV 156
>gi|121709158|ref|XP_001272326.1| zinc knuckle domain protein [Aspergillus clavatus NRRL 1]
gi|119400475|gb|EAW10900.1| zinc knuckle domain protein [Aspergillus clavatus NRRL 1]
Length = 236
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 68/156 (43%), Gaps = 26/156 (16%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQ-KSSADARGDKVGIVCYKCNNYGHFARECATESVTCYN 61
+T T QCYNC GH Q CP + + A G CY CN GH AR C +
Sbjct: 46 TTETKQCYNCQGLGHVQADCPTLRLNGGANGR-----CYNCNQPGHLARNCPAPATG--- 97
Query: 62 CSGQGHVAKDCTVKSSI-----------ICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
+G+G A S CY C HFAR+C + K CYAC + GH+
Sbjct: 98 -AGRGVGAPRGGFNSGFRGGYGGYPRAATCYKCGGPNHFARDCQAHAMK-CYACGKLGHI 155
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+++C G P+ CY C GH+S DC
Sbjct: 156 SRDCTAPNGG----PLSSAGKVCYKCSQAGHISRDC 187
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 24/134 (17%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + CYNC GH +CP
Sbjct: 7 ACYKCGNIGHYAEVCSSSERLCYNCKQPGHESSSCPRPRTTETKQCYNCQGLGHVQADCP 66
Query: 95 -----NDSSKRCYACHQAGHMAKECPGQTAGK-----SPEPVVDMSL-----------TC 133
++ RCY C+Q GH+A+ CP G +P + TC
Sbjct: 67 TLRLNGGANGRCYNCNQPGHLARNCPAPATGAGRGVGAPRGGFNSGFRGGYGGYPRAATC 126
Query: 134 YVCGHQGHLSYDCK 147
Y CG H + DC+
Sbjct: 127 YKCGGPNHFARDCQ 140
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 25/123 (20%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKV------------------GIVCYKC 42
++ + +CYNC GH +CP ++ RG CYKC
Sbjct: 70 LNGGANGRCYNCNQPGHLARNCPAPATGAGRGVGAPRGGFNSGFRGGYGGYPRAATCYKC 129
Query: 43 NNYGHFARECATESVTCYNCSGQGHVAKDCTVK-------SSIICYNCNSSGHFARNCPN 95
HFAR+C ++ CY C GH+++DCT + +CY C+ +GH +R+CP
Sbjct: 130 GGPNHFARDCQAHAMKCYACGKLGHISRDCTAPNGGPLSSAGKVCYKCSQAGHISRDCPT 189
Query: 96 DSS 98
+ +
Sbjct: 190 NEA 192
>gi|327296678|ref|XP_003233033.1| zinc knuckle nucleic acid binding protein [Trichophyton rubrum CBS
118892]
gi|326464339|gb|EGD89792.1| zinc knuckle nucleic acid binding protein [Trichophyton rubrum CBS
118892]
Length = 208
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 65/156 (41%), Gaps = 20/156 (12%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
+T T QCY+C GH Q CP + G CY CN GH AR C + + N
Sbjct: 15 TTETKQCYHCQGLGHVQADCP---TLRLNGGASNARCYSCNLPGHLARNCPSGGIQQQNP 71
Query: 63 SG------------QGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
G + CY C HFAR+C + +CYAC + GH+
Sbjct: 72 QAVRNTGSARGGFNAGFRGGPAGYPRAATCYKCGGPNHFARDC-QAQAMKCYACGKLGHI 130
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+++C G P+ + CY C GH+S DC
Sbjct: 131 SRDCTAPNGG----PLSSVGKVCYKCSQAGHISRDC 162
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 30/125 (24%)
Query: 5 STIQCYNCFDFGHYQYSCPQ-----------KSSADARGD------------KVGIVCYK 41
S +CY+C GH +CP +++ ARG CYK
Sbjct: 44 SNARCYSCNLPGHLARNCPSGGIQQQNPQAVRNTGSARGGFNAGFRGGPAGYPRAATCYK 103
Query: 42 CNNYGHFARECATESVTCYNCSGQGHVAKDCTVK-----SSI--ICYNCNSSGHFARNCP 94
C HFAR+C +++ CY C GH+++DCT SS+ +CY C+ +GH +R+CP
Sbjct: 104 CGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGGPLSSVGKVCYKCSQAGHISRDCP 163
Query: 95 NDSSK 99
++ +
Sbjct: 164 TNNPE 168
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 52/135 (38%), Gaps = 50/135 (37%)
Query: 50 RECATESVTCYNCSGQGHVAKDCTV------KSSIICYNCNSSGHFARNCP--------- 94
R TE+ CY+C G GHV DC S+ CY+CN GH ARNCP
Sbjct: 12 RPRTTETKQCYHCQGLGHVQADCPTLRLNGGASNARCYSCNLPGHLARNCPSGGIQQQNP 71
Query: 95 ----NDSSKR-------------------CYACHQAGHMAKECPGQTAGKSPEPVVDMSL 131
N S R CY C H A++C Q ++
Sbjct: 72 QAVRNTGSARGGFNAGFRGGPAGYPRAATCYKCGGPNHFARDCQAQ------------AM 119
Query: 132 TCYVCGHQGHLSYDC 146
CY CG GH+S DC
Sbjct: 120 KCYACGKLGHISRDC 134
>gi|396496524|ref|XP_003844764.1| hypothetical protein LEMA_P000720.1 [Leptosphaeria maculans JN3]
gi|312221345|emb|CBY01285.1| hypothetical protein LEMA_P000720.1 [Leptosphaeria maculans JN3]
Length = 622
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSGQ 65
C NC + GH + C Q+ + + + I C C+ GH AR+C E + C NC
Sbjct: 421 CGNCGELGHVRKHCKQEQ-PERQSHQPEITCVNCHEIGHRARDCNKERLNPHACRNCKKD 479
Query: 66 GHVAKDCTVKSS---IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKS 122
GH +KDC S + C C +GHF+++CPN +++ C C H+AK+C K+
Sbjct: 480 GHNSKDCPEPRSAEGVECRKCMQTGHFSKDCPNVAARTCRNCDSTEHIAKDC---DQPKN 536
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDC 146
P+ C C GH S DC
Sbjct: 537 PD-----KTQCRNCDLTGHFSRDC 555
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 56/113 (49%), Gaps = 13/113 (11%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-TCYNCSGQGH 67
C NC GH CP+ SA+ G+ C KC GHF+++C + TC NC H
Sbjct: 473 CRNCKKDGHNSKDCPEPRSAE------GVECRKCMQTGHFSKDCPNVAARTCRNCDSTEH 526
Query: 68 VAKDCTVKSS---IICYNCNSSGHFARNCPND---SSKRCYACHQAGHMAKEC 114
+AKDC + C NC+ +GHF+R+CP S +C C GH K C
Sbjct: 527 IAKDCDQPKNPDKTQCRNCDLTGHFSRDCPKPRDYSRVKCSNCGDMGHTIKRC 579
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 56/135 (41%), Gaps = 25/135 (18%)
Query: 26 SSADARGDKVGIVCYKCNNYGHFARECATE---------SVTCYNCSGQGHVAKDCTVK- 75
SSA D+ +C C GH + C E +TC NC GH A+DC +
Sbjct: 408 SSAGFVEDRGVPLCGNCGELGHVRKHCKQEQPERQSHQPEITCVNCHEIGHRARDCNKER 467
Query: 76 -SSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKECPGQTAGKSPEPVVDMSL 131
+ C NC GH +++CP S C C Q GH +K+CP A
Sbjct: 468 LNPHACRNCKKDGHNSKDCPEPRSAEGVECRKCMQTGHFSKDCPNVAA-----------R 516
Query: 132 TCYVCGHQGHLSYDC 146
TC C H++ DC
Sbjct: 517 TCRNCDSTEHIAKDC 531
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 41/88 (46%), Gaps = 14/88 (15%)
Query: 38 VCYKCNNYGHFARECATESV------TCYNCSGQGHVAKDCT---VKSSII--CYNCNSS 86
C C+ GHFAR+C CYNC GH DCT V+ + C C
Sbjct: 201 TCRVCHQTGHFARDCPEAPAGGGLTGECYNCGEVGHNKADCTNPRVERAFTGTCNGCGVE 260
Query: 87 GHFARNCPNDSSKRCYACHQAGHMAKEC 114
GH R+CP S++C C Q GH A EC
Sbjct: 261 GHTIRDCP---SQKCKLCDQPGHRALEC 285
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Query: 101 CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C CHQ GH A++CP AG ++ CY CG GH DC
Sbjct: 202 CRVCHQTGHFARDCPEAPAGGG------LTGECYNCGEVGHNKADC 241
>gi|357147274|ref|XP_003574285.1| PREDICTED: DNA-binding protein HEXBP-like isoform 1 [Brachypodium
distachyon]
gi|357147277|ref|XP_003574286.1| PREDICTED: DNA-binding protein HEXBP-like isoform 2 [Brachypodium
distachyon]
Length = 201
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 60/118 (50%), Gaps = 21/118 (17%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------ESV 57
+S C+NC + GH SCP + +C C GH A++C+ E
Sbjct: 6 SSKGLCWNCKEPGHMANSCPNEG-----------ICRNCGKSGHIAKDCSAPPMLPGEVK 54
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
C NC GH+A +CT + + C NC SGH ARNC ND C CH AGH+A+ECP
Sbjct: 55 LCNNCYKPGHIAVECTNEKA--CNNCRKSGHLARNCTNDPV--CNLCHVAGHLARECP 108
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 23/105 (21%)
Query: 48 FARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC------PNDSSKRC 101
A EC+++ + C+NC GH+A C + IC NC SGH A++C P + K C
Sbjct: 1 MAAECSSKGL-CWNCKEPGHMANSCPNEG--ICRNCGKSGHIAKDCSAPPMLPGEV-KLC 56
Query: 102 YACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C++ GH+A EC + A C C GHL+ +C
Sbjct: 57 NNCYKPGHIAVECTNEKA-------------CNNCRKSGHLARNC 88
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 55/162 (33%), Gaps = 51/162 (31%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
M C NC+ GH C + + C C GH AR C + V C
Sbjct: 48 MLPGEVKLCNNCYKPGHIAVECTNEKA-----------CNNCRKSGHLARNCTNDPV-CN 95
Query: 61 NCSGQGHVAKDCTVKSSII--------------------------------------CYN 82
C GH+A++C II C
Sbjct: 96 LCHVAGHLARECPKSDEIIERGGPPLRGSGALFHGGDIPFRGGGGAPFRGGGYSDMVCRI 155
Query: 83 CNSSGHFARNCPNDSSKRCYACHQAGHMAKECP-GQTAGKSP 123
CN GH +R+C + + C+ C GHMA ECP G+ + P
Sbjct: 156 CNQVGHMSRDCMDGAFTICHNCGGRGHMAYECPSGRLLDRFP 197
>gi|426249735|ref|XP_004018605.1| PREDICTED: cellular nucleic acid-binding protein isoform 2 [Ovis
aries]
Length = 169
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 22/165 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADAR-----------GDKVGIVCYKCNNYGHFARECA 53
S+ +C+ C GH+ CP + +CY+C G A++
Sbjct: 2 SSNECFKCGRSGHWARECPAGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGPPAKD-W 60
Query: 54 TESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
CYNC GH+AKDC + CYNC GH AR+C + ++CY+C + GH+
Sbjct: 61 IRGGPCYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHI 120
Query: 111 AKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
K+C G+T + + CY CG GHL+ +C +
Sbjct: 121 QKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 165
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 53/136 (38%), Gaps = 37/136 (27%)
Query: 39 CYKCNNYGHFARECATESV---------------------TCYNCSGQGHVAKDCTVKSS 77
C+KC GH+AREC CY C G AKD
Sbjct: 6 CFKCGRSGHWARECPAGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGPPAKDWIRGGP 65
Query: 78 IICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
CYNC GH A++C +R CY C + GH+A++C K CY
Sbjct: 66 --CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK-----------CY 112
Query: 135 VCGHQGHLSYDCKLVQ 150
CG GH+ DC V+
Sbjct: 113 SCGEFGHIQKDCTKVK 128
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 110 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 157
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 158 HLARECTIEAT 168
>gi|115456243|ref|NP_001051722.1| Os03g0820700 [Oryza sativa Japonica Group]
gi|108711794|gb|ABF99589.1| Zinc knuckle family protein, expressed [Oryza sativa Japonica
Group]
gi|113550193|dbj|BAF13636.1| Os03g0820700 [Oryza sativa Japonica Group]
Length = 242
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 68/145 (46%), Gaps = 17/145 (11%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE--SVTCYN 61
TS C+NC GH C K +C+ C+ GH AR+C + S C
Sbjct: 81 TSETVCWNCKQSGHIATEC-----------KNDALCHTCSKTGHLARDCPSSGSSKLCNK 129
Query: 62 CSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGK 121
C GH+A DCT + + C NC GH AR C N+ C C+ +GH+A+ C T
Sbjct: 130 CFKPGHIAVDCTNERA--CNNCRQPGHIARECTNEPV--CNLCNVSGHLARNCQKTTISS 185
Query: 122 SPEPVVDMSLTCYVCGHQGHLSYDC 146
+ +TC +CG GH+S +C
Sbjct: 186 EIQGGPFRDITCRLCGKPGHISRNC 210
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 22/113 (19%)
Query: 48 FARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND-SSKRCYACHQ 106
FA EC +E+V C+NC GH+A +C K+ +C+ C+ +GH AR+CP+ SSK C C +
Sbjct: 76 FAAECTSETV-CWNCKQSGHIATEC--KNDALCHTCSKTGHLARDCPSSGSSKLCNKCFK 132
Query: 107 AGHMAKEC-----------PGQTAGK-SPEPVVDMSLTCYVCGHQGHLSYDCK 147
GH+A +C PG A + + EPV C +C GHL+ +C+
Sbjct: 133 PGHIAVDCTNERACNNCRQPGHIARECTNEPV------CNLCNVSGHLARNCQ 179
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 55/125 (44%), Gaps = 25/125 (20%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYN 61
SS S+ C CF GH C + + C C GH AREC E V C
Sbjct: 120 SSGSSKLCNKCFKPGHIAVDCTNERA-----------CNNCRQPGHIARECTNEPV-CNL 167
Query: 62 CSGQGHVAKDC---TVKSSI--------ICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
C+ GH+A++C T+ S I C C GH +RNC ++ C C GHM
Sbjct: 168 CNVSGHLARNCQKTTISSEIQGGPFRDITCRLCGKPGHISRNCM--TTMICGTCGGRGHM 225
Query: 111 AKECP 115
+ ECP
Sbjct: 226 SYECP 230
>gi|68482666|ref|XP_714730.1| hypothetical protein CaO19.10692 [Candida albicans SC5314]
gi|68482937|ref|XP_714599.1| hypothetical protein CaO19.3182 [Candida albicans SC5314]
gi|46436181|gb|EAK95548.1| hypothetical protein CaO19.3182 [Candida albicans SC5314]
gi|46436321|gb|EAK95685.1| hypothetical protein CaO19.10692 [Candida albicans SC5314]
gi|238882592|gb|EEQ46230.1| zinc-finger protein GIS2 [Candida albicans WO-1]
Length = 175
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 70/157 (44%), Gaps = 31/157 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES--VTCYNCSGQG 66
CYNC GH CP A+ CY C + GH EC ++ CYNC G
Sbjct: 29 CYNCHKPGHESNDCPDPKQNTAK------QCYSCGDVGHIQTECPNQAQGAKCYNCGQFG 82
Query: 67 HVAKDCTVK-----------------SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
H++K+C S CY C HFAR+C ++ K CYAC + GH
Sbjct: 83 HISKNCDSAPSSTNNAPSFKRPSGRASGTTCYKCGGPNHFARDCQANTVK-CYACGKVGH 141
Query: 110 MAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++K+C G + + TCY CG GH+S +C
Sbjct: 142 ISKDCHSSAGGSN-----FSAKTCYNCGKSGHISKEC 173
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 55/121 (45%), Gaps = 10/121 (8%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCP 94
CYKC GH A +C E CYNC GH + DC ++ CY+C GH CP
Sbjct: 8 TCYKCGEVGHVADDCQQEERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTECP 67
Query: 95 NDS-SKRCYACHQAGHMAKECPGQTAGKSPEPVVDM------SLTCYVCGHQGHLSYDCK 147
N + +CY C Q GH++K C + + P TCY CG H + DC+
Sbjct: 68 NQAQGAKCYNCGQFGHISKNCDSAPSSTNNAPSFKRPSGRASGTTCYKCGGPNHFARDCQ 127
Query: 148 L 148
Sbjct: 128 A 128
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 33/131 (25%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------------- 54
QCY+C D GH Q CP ++ G CY C +GH ++ C +
Sbjct: 52 QCYSCGDVGHIQTECPNQAQ--------GAKCYNCGQFGHISKNCDSAPSSTNNAPSFKR 103
Query: 55 -----ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC------PNDSSKRCYA 103
TCY C G H A+DC +++ CY C GH +++C N S+K CY
Sbjct: 104 PSGRASGTTCYKCGGPNHFARDCQA-NTVKCYACGKVGHISKDCHSSAGGSNFSAKTCYN 162
Query: 104 CHQAGHMAKEC 114
C ++GH++KEC
Sbjct: 163 CGKSGHISKEC 173
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN---DSSKRCYACHQAGHMAKEC 114
TCY C GHVA DC + +CYNC+ GH + +CP+ +++K+CY+C GH+ EC
Sbjct: 8 TCYKCGEVGHVADDCQ-QEERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTEC 66
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
P Q G CY CG GH+S +C S
Sbjct: 67 PNQAQG----------AKCYNCGQFGHISKNCDSAPSS 94
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 12/60 (20%)
Query: 99 KRCYACHQAGHMAKEC------------PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY C + GH+A +C PG + P+P + + CY CG GH+ +C
Sbjct: 7 RTCYKCGEVGHVADDCQQEERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTEC 66
>gi|115385340|ref|XP_001209217.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196909|gb|EAU38609.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 227
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 65/154 (42%), Gaps = 41/154 (26%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------ 54
+ S+ QCYNC GH Q CP A G CY C+ GH AR C
Sbjct: 32 IGSSLAKQCYNCQGLGHVQADCPTLRLNGANGR-----CYNCSQPGHLARNCPAPASGVG 86
Query: 55 ----------------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARN 92
+ TCY C G H A+DC + ++ CY C GH +R+
Sbjct: 87 RGAGAPRGGFNGGFRGGYGGYPRAATCYKCGGPNHFARDCQAQ-AMKCYACGKLGHISRD 145
Query: 93 C--PN-----DSSKRCYACHQAGHMAKECPGQTA 119
C PN + K CY C QAGH++++CP A
Sbjct: 146 CTAPNGGPLSSAGKVCYKCAQAGHISRDCPNNEA 179
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 20/88 (22%)
Query: 80 CYNCNSSGHFARNCP----NDSSKRCYACHQAGHMAKECPGQTAG--------------- 120
CYNC GH +CP N ++ RCY C Q GH+A+ CP +G
Sbjct: 40 CYNCQGLGHVQADCPTLRLNGANGRCYNCSQPGHLARNCPAPASGVGRGAGAPRGGFNGG 99
Query: 121 -KSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ + TCY CG H + DC+
Sbjct: 100 FRGGYGGYPRAATCYKCGGPNHFARDCQ 127
>gi|392863891|gb|EAS35332.2| zinc knuckle transcription factor [Coccidioides immitis RS]
Length = 482
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 69/147 (46%), Gaps = 19/147 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CYNCSG 64
+C NC + GH + C Q+ + R V + C C GH AR+C + C NC
Sbjct: 266 KCDNCGEIGHTRRGCKQEPATVER---VEVKCVICKEIGHRARDCIQPRIDKSGCRNCGN 322
Query: 65 QGHVAKDCTVKSS---IICYNCNSSGHFARNCPND--SSKRCYACHQAGHMAKECPGQTA 119
H AK C S + C C GHFA++CP +S+ C C + GHM+KEC
Sbjct: 323 PDHHAKQCPEPRSAEGVECKKCQQVGHFAKDCPEKGVNSRACRNCGEEGHMSKEC----- 377
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+P ++TC C GH+S DC
Sbjct: 378 ---DKPRNMDNVTCRNCEKTGHMSRDC 401
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 15/115 (13%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CYNCSGQ 65
C NC + H+ CP+ SA+ G+ C KC GHFA++C + V C NC +
Sbjct: 317 CRNCGNPDHHAKQCPEPRSAE------GVECKKCQQVGHFAKDCPEKGVNSRACRNCGEE 370
Query: 66 GHVAKDCTVK---SSIICYNCNSSGHFARNCPND---SSKRCYACHQAGHMAKEC 114
GH++K+C ++ C NC +GH +R+CP + S +C C + GH + C
Sbjct: 371 GHMSKECDKPRNMDNVTCRNCEKTGHMSRDCPEEKDWSKVQCTNCKEMGHTFRRC 425
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 14/98 (14%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TESVT 58
S ++C C GH+ CP+K ++R C C GH ++EC ++VT
Sbjct: 335 SAEGVECKKCQQVGHFAKDCPEK-GVNSR------ACRNCGEEGHMSKECDKPRNMDNVT 387
Query: 59 CYNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNC 93
C NC GH+++DC + S + C NC GH R C
Sbjct: 388 CRNCEKTGHMSRDCPEEKDWSKVQCTNCKEMGHTFRRC 425
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSGQ 65
C+NC GH+ CP+ A C+ C GH EC V TC C +
Sbjct: 52 CHNCGQPGHFSRECPEPRKASG-------ACFNCGEEGHNKAECPNPRVFKGTCRICQAE 104
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNC 93
GH A +C K+ +C NC GH ++C
Sbjct: 105 GHPAFECPDKAPDVCKNCKGEGHKTKDC 132
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 38 VCYKCNNYGHFARECATE---SVTCYNCSGQGHVAKDCTVKSSI--ICYNCNSSGHFARN 92
C+ C GHF+REC S C+NC +GH +C C C + GH A
Sbjct: 51 ACHNCGQPGHFSRECPEPRKASGACFNCGEEGHNKAECPNPRVFKGTCRICQAEGHPAFE 110
Query: 93 CPNDSSKRCYACHQAGHMAKEC 114
CP+ + C C GH K+C
Sbjct: 111 CPDKAPDVCKNCKGEGHKTKDC 132
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 58 TCYNCSGQGHVAKDCTV--KSSIICYNCNSSGHFARNCPNDSSKR--CYACHQAGHMAKE 113
C+NC GH +++C K+S C+NC GH CPN + C C GH A E
Sbjct: 51 ACHNCGQPGHFSRECPEPRKASGACFNCGEEGHNKAECPNPRVFKGTCRICQAEGHPAFE 110
Query: 114 CPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
CP K+P+ C C +GH + DC +K
Sbjct: 111 CP----DKAPD-------VCKNCKGEGHKTKDCTENRK 137
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 11/91 (12%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN--DSSKRCYACHQAGHMAKECP 115
T Y G V + ++ C+NC GHF+R CP +S C+ C + GH ECP
Sbjct: 30 TGYREEIPGSVGEGGKTNNNDACHNCGQPGHFSRECPEPRKASGACFNCGEEGHNKAECP 89
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
K TC +C +GH +++C
Sbjct: 90 NPRVFKG---------TCRICQAEGHPAFEC 111
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-TCYNCSGQGH 67
C+NC + GH + CP C C GH A EC ++ C NC G+GH
Sbjct: 75 CFNCGEEGHNKAECPNPRVFKG-------TCRICQAEGHPAFECPDKAPDVCKNCKGEGH 127
Query: 68 VAKDCT 73
KDCT
Sbjct: 128 KTKDCT 133
>gi|121945885|dbj|BAF44661.1| RNA helicase [Neobenedenia girellae]
Length = 634
Score = 75.1 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 17/106 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NC + GH++ CP C C GHF +C E +TC NC +GH+
Sbjct: 51 CRNCGELGHHRDECPAPPK-----------CGNCRAEGHFIEDCP-EPLTCRNCGQEGHM 98
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
+ CT + C CN GH A++CPN +C C + GH ++EC
Sbjct: 99 SSACTEPAK--CRECNEEGHQAKDCPN---AKCRNCGELGHRSREC 139
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 50/110 (45%), Gaps = 20/110 (18%)
Query: 39 CYKCNNYGHFARECAT--ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND 96
C KC GH R+C T + C C GH+AK+C K C NC GH CP
Sbjct: 11 CRKCGETGHIGRDCPTVGDDRACNFCQETGHLAKECPKKP---CRNCGELGHHRDECP-- 65
Query: 97 SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ +C C GH ++C PEP LTC CG +GH+S C
Sbjct: 66 APPKCGNCRAEGHFIEDC--------PEP-----LTCRNCGQEGHMSSAC 102
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 54/138 (39%), Gaps = 31/138 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C C + GH CP+K C C GH EC C NC +GH
Sbjct: 33 CNFCQETGHLAKECPKKP------------CRNCGELGHHRDECPAPP-KCGNCRAEGHF 79
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVD 128
+DC + C NC GH + C + +C C++ GH AK+CP
Sbjct: 80 IEDC--PEPLTCRNCGQEGHMSSACTEPA--KCRECNEEGHQAKDCP------------- 122
Query: 129 MSLTCYVCGHQGHLSYDC 146
+ C CG GH S +C
Sbjct: 123 -NAKCRNCGELGHRSREC 139
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 15/88 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGH 67
+C NC GH+ CP+ + C C GH + C TE C C+ +GH
Sbjct: 69 KCGNCRAEGHFIEDCPEP-----------LTCRNCGQEGHMSSAC-TEPAKCRECNEEGH 116
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPN 95
AKDC + C NC GH +R C N
Sbjct: 117 QAKDC---PNAKCRNCGELGHRSRECNN 141
>gi|358365333|dbj|GAA81955.1| zinc knuckle transcription factor [Aspergillus kawachii IFO 4308]
Length = 489
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 60/123 (48%), Gaps = 14/123 (11%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV--TCYNC 62
+ C NC H CP SA+ + C +CN GHFA++C + TC NC
Sbjct: 319 NVFACRNCGSEDHKASECPNPRSAE------NVECKRCNEMGHFAKDCPQKPPPRTCRNC 372
Query: 63 SGQGHVAKDCTVK---SSIICYNCNSSGHFARNCPND---SSKRCYACHQAGHMAKECPG 116
+ HVAK+C S++ C NC+ GHF+R+CP S +C C + GH K CP
Sbjct: 373 GSEDHVAKECDKPRDVSTVTCRNCDEVGHFSRDCPKKRDYSRVKCNNCGEMGHTIKRCPT 432
Query: 117 QTA 119
A
Sbjct: 433 ANA 435
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 64/146 (43%), Gaps = 18/146 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES---VTCYNCSG 64
+C NC GH C ++ +VG+ C C+ GH AR+C C NC
Sbjct: 272 KCNNCGALGHTFRGCKEEREERE---RVGVKCVNCSADGHRARDCPEPRRNVFACRNCGS 328
Query: 65 QGHVAKDCTVKSS---IICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAG 120
+ H A +C S + C CN GHFA++CP R C C H+AKEC
Sbjct: 329 EDHKASECPNPRSAENVECKRCNEMGHFAKDCPQKPPPRTCRNCGSEDHVAKEC------ 382
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDC 146
+P ++TC C GH S DC
Sbjct: 383 --DKPRDVSTVTCRNCDEVGHFSRDC 406
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 39 CYKCNNYGHFARECAT--ESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNC 93
C C + GHFAR C + + C+NC GH +CT K I C CN GH A C
Sbjct: 59 CRNCGSDGHFARNCPEPRKDIACFNCGEDGHNKSECT-KPRIFKGACRICNKEGHPAAEC 117
Query: 94 PNDSSKRCYACHQAGHMAKEC 114
P + C C GH +C
Sbjct: 118 PEKAPDVCKNCKMEGHKTMDC 138
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC GH+ +CP+ + I C+ C GH EC + C C+
Sbjct: 58 RCRNCGSDGHFARNCPEP--------RKDIACFNCGEDGHNKSECTKPRIFKGACRICNK 109
Query: 65 QGHVAKDCTVKSSIICYNCNSSGHFARNC 93
+GH A +C K+ +C NC GH +C
Sbjct: 110 EGHPAAECPEKAPDVCKNCKMEGHKTMDC 138
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 14/96 (14%)
Query: 59 CYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARNC--PNDSSKRCYACHQAGHMAKECP 115
C NC GH A++C + I C+NC GH C P C C++ GH A ECP
Sbjct: 59 CRNCGSDGHFARNCPEPRKDIACFNCGEDGHNKSECTKPRIFKGACRICNKEGHPAAECP 118
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
K+P+ C C +GH + DCK ++
Sbjct: 119 ----EKAPD-------VCKNCKMEGHKTMDCKENRR 143
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT 58
ST+ C NC + GH+ CP+K D + C C GH + C T + T
Sbjct: 387 DVSTVTCRNCDEVGHFSRDCPKKR------DYSRVKCNNCGEMGHTIKRCPTANAT 436
>gi|407925395|gb|EKG18406.1| Zinc finger CCHC-type protein [Macrophomina phaseolina MS6]
Length = 244
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 80/206 (38%), Gaps = 70/206 (33%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TES 56
MSS S CY C + GHY C S+ R +CY C GH + C TE+
Sbjct: 28 MSSLSRRACYKCGNVGHYAEVC----SSSER------LCYNCKQPGHESNGCPHPRTTET 77
Query: 57 VTCYNCSGQGHVAKDCTV------KSSIICYNCNSSGHFARNCPNDS------------- 97
CY+C G GHV DC +S CY+C GH AR+CPN +
Sbjct: 78 KQCYHCQGLGHVQADCPTLRLSGAGTSGRCYSCGQPGHLARSCPNPAGGVGRGAGIPRGG 137
Query: 98 ---------------------------------SKRCYACHQAGHMAKECPGQTAGKSPE 124
+ +CYAC + GH++++C G
Sbjct: 138 YGGFRGGFAGGPRPATCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGG---- 193
Query: 125 PVVDMSLTCYVCGHQGHLSYDCKLVQ 150
P+ TCY CG GH+S +C +
Sbjct: 194 PLNTAGKTCYRCGEAGHISRECPQAE 219
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 67/161 (41%), Gaps = 43/161 (26%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES------ 56
+T T QCY+C GH Q CP + G CY C GH AR C +
Sbjct: 74 TTETKQCYHCQGLGHVQADCP---TLRLSGAGTSGRCYSCGQPGHLARSCPNPAGGVGRG 130
Query: 57 ---------------------VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP- 94
TCY C G H A+DC ++ + CY C GH +R+C
Sbjct: 131 AGIPRGGYGGFRGGFAGGPRPATCYKCGGPNHFARDCQAQA-MKCYACGKLGHISRDCTA 189
Query: 95 ------NDSSKRCYACHQAGHMAKECP-----GQTAGKSPE 124
N + K CY C +AGH+++ECP G G +P+
Sbjct: 190 PNGGPLNTAGKTCYRCGEAGHISRECPQAEINGDGLGSAPQ 230
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S CY C + GH+A C + S + CY C Q GH + CP P + CY
Sbjct: 32 SRRACYKCGNVGHYAEVC-SSSERLCYNCKQPGHESNGCP--------HPRTTETKQCYH 82
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ DC ++ S
Sbjct: 83 CQGLGHVQADCPTLRLS 99
>gi|134079843|emb|CAK40976.1| unnamed protein product [Aspergillus niger]
Length = 214
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 68/172 (39%), Gaps = 35/172 (20%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT-----C 59
S CY C + GHY C + CY C GH +C T + C
Sbjct: 4 SRRACYKCGNIGHYAEVCSSSERLCYNCKQPAKQCYNCQGLGHVQADCPTLRLNGANGRC 63
Query: 60 YNCSGQGHVAKDCTVKSS-------------------------IICYNCNSSGHFARNCP 94
YNCS GH+A++C +S CY C HFAR+C
Sbjct: 64 YNCSQPGHLARNCPAPASGAPRAPAPRGGFNSGFRGGYGYPRAATCYKCGGPNHFARDCQ 123
Query: 95 NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ K CYAC + GH+++EC G P+ CY C GH+S DC
Sbjct: 124 AQAMK-CYACGKLGHISRECTAPNGG----PLSSAGKVCYKCSQAGHISRDC 170
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 61/145 (42%), Gaps = 39/145 (26%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------------- 54
QCYNC GH Q CP A G CY C+ GH AR C
Sbjct: 37 QCYNCQGLGHVQADCPTLRLNGANGR-----CYNCSQPGHLARNCPAPASGAPRAPAPRG 91
Query: 55 -------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC--PN---- 95
+ TCY C G H A+DC ++ + CY C GH +R C PN
Sbjct: 92 GFNSGFRGGYGYPRAATCYKCGGPNHFARDCQAQA-MKCYACGKLGHISRECTAPNGGPL 150
Query: 96 -DSSKRCYACHQAGHMAKECPGQTA 119
+ K CY C QAGH++++CP A
Sbjct: 151 SSAGKVCYKCSQAGHISRDCPSNEA 175
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 29/128 (22%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP--- 94
CYKC N GH+A C++ CYNC + + CYNC GH +CP
Sbjct: 7 ACYKCGNIGHYAEVCSSSERLCYNCK-----------QPAKQCYNCQGLGHVQADCPTLR 55
Query: 95 -NDSSKRCYACHQAGHMAKECPGQTAG--KSPEPV------------VDMSLTCYVCGHQ 139
N ++ RCY C Q GH+A+ CP +G ++P P + TCY CG
Sbjct: 56 LNGANGRCYNCSQPGHLARNCPAPASGAPRAPAPRGGFNSGFRGGYGYPRAATCYKCGGP 115
Query: 140 GHLSYDCK 147
H + DC+
Sbjct: 116 NHFARDCQ 123
>gi|322698317|gb|EFY90088.1| zinc knuckle transcription factor (CnjB), putative [Metarhizium
acridum CQMa 102]
Length = 452
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 65/150 (43%), Gaps = 16/150 (10%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TC 59
T +C NC + GH C Q+ + + I C C + GH R+C V C
Sbjct: 242 DTGLRKCQNCGELGHSSKFCTQEKVE--KKAQPAISCSNCGDEGHRIRDCPEPRVDKFAC 299
Query: 60 YNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
NC GH A DC ++ C C GH ++CP S+ C C Q GH+AK+C
Sbjct: 300 RNCGKSGHRASDCEEPPNLENMECRKCGEKGHMGKDCPQGGSRACRNCGQEGHIAKDC-- 357
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+P ++TC C GH S DC
Sbjct: 358 ------DQPRNMDNVTCRNCEKTGHFSRDC 381
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 64/152 (42%), Gaps = 22/152 (14%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT----ESVT 58
+ I C NC D GH CP+ R DK C C GH A +C E++
Sbjct: 270 AQPAISCSNCGDEGHRIRDCPE-----PRVDK--FACRNCGKSGHRASDCEEPPNLENME 322
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP---NDSSKRCYACHQAGHMAKECP 115
C C +GH+ KDC S C NC GH A++C N + C C + GH +++C
Sbjct: 323 CRKCGEKGHMGKDCPQGGSRACRNCGQEGHIAKDCDQPRNMDNVTCRNCEKTGHFSRDC- 381
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
PEP + C C GH CK
Sbjct: 382 -------PEPKDWSKVQCSNCQKFGHTKVRCK 406
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT-CYNCSGQ 65
++C C GH + +CP + + +A D C+ C GH A +C T T C C +
Sbjct: 26 VKCGACSQEGHEEPNCPNQHT-EAGNDDANNKCFNCGETGHRAADCPTPRDTACRYCKKE 84
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
GH+ +DC K ++C NC GH +NC N
Sbjct: 85 GHMIRDCPDKPPMVCDNCGQEGHVRKNCEN 114
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 9/110 (8%)
Query: 14 DFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---------CYNCSG 64
D+G+ + D+ ++ + C C+ GH C + C+NC
Sbjct: 3 DWGNSGDNWGSAGGNDSGWNQPQVKCGACSQEGHEEPNCPNQHTEAGNDDANNKCFNCGE 62
Query: 65 QGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
GH A DC C C GH R+CP+ C C Q GH+ K C
Sbjct: 63 TGHRAADCPTPRDTACRYCKKEGHMIRDCPDKPPMVCDNCGQEGHVRKNC 112
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 19/99 (19%)
Query: 57 VTCYNCSGQGHVAKDCTVK--------SSIICYNCNSSGHFARNCPNDSSKRCYACHQAG 108
V C CS +GH +C + ++ C+NC +GH A +CP C C + G
Sbjct: 26 VKCGACSQEGHEEPNCPNQHTEAGNDDANNKCFNCGETGHRAADCPTPRDTACRYCKKEG 85
Query: 109 HMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
HM ++CP + + C CG +GH+ +C+
Sbjct: 86 HMIRDCPDKPP-----------MVCDNCGQEGHVRKNCE 113
>gi|315043931|ref|XP_003171341.1| DNA-binding protein HEXBP [Arthroderma gypseum CBS 118893]
gi|311343684|gb|EFR02887.1| DNA-binding protein HEXBP [Arthroderma gypseum CBS 118893]
Length = 208
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 66/157 (42%), Gaps = 21/157 (13%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
+T T QCY+C GH Q CP + G CY CN GH AR C + + N
Sbjct: 15 TTETKQCYHCQGLGHVQADCP---TLRLNGGASNARCYNCNMPGHLARNCPSGGMQQQNP 71
Query: 63 -------------SGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
+ G + CY C HFAR+C + +CYAC + GH
Sbjct: 72 QPVRNTGPARGAFNNAGFRGGSAGYPRAATCYKCGGPNHFARDC-QAQAMKCYACGKLGH 130
Query: 110 MAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++++C G P+ + CY C GH+S DC
Sbjct: 131 ISRDCTAPNGG----PLSSVGKVCYKCSQAGHISRDC 163
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 31/124 (25%)
Query: 5 STIQCYNCFDFGHYQYSCPQ-----------KSSADARG--DKVGI-----------VCY 40
S +CYNC GH +CP +++ ARG + G CY
Sbjct: 44 SNARCYNCNMPGHLARNCPSGGMQQQNPQPVRNTGPARGAFNNAGFRGGSAGYPRAATCY 103
Query: 41 KCNNYGHFARECATESVTCYNCSGQGHVAKDCTVK-----SSI--ICYNCNSSGHFARNC 93
KC HFAR+C +++ CY C GH+++DCT SS+ +CY C+ +GH +R+C
Sbjct: 104 KCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGGPLSSVGKVCYKCSQAGHISRDC 163
Query: 94 PNDS 97
P ++
Sbjct: 164 PTNN 167
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 53/136 (38%), Gaps = 51/136 (37%)
Query: 50 RECATESVTCYNCSGQGHVAKDCTV------KSSIICYNCNSSGHFARNCP--------- 94
R TE+ CY+C G GHV DC S+ CYNCN GH ARNCP
Sbjct: 12 RPRTTETKQCYHCQGLGHVQADCPTLRLNGGASNARCYNCNMPGHLARNCPSGGMQQQNP 71
Query: 95 -------------NDSSKR-----------CYACHQAGHMAKECPGQTAGKSPEPVVDMS 130
N++ R CY C H A++C Q +
Sbjct: 72 QPVRNTGPARGAFNNAGFRGGSAGYPRAATCYKCGGPNHFARDCQAQ------------A 119
Query: 131 LTCYVCGHQGHLSYDC 146
+ CY CG GH+S DC
Sbjct: 120 MKCYACGKLGHISRDC 135
>gi|71747586|ref|XP_822848.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
gi|70832516|gb|EAN78020.1| universal minicircle sequence binding protein (UMSBP), putative
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
Length = 213
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 63/147 (42%), Gaps = 24/147 (16%)
Query: 24 QKSSADARGDKVGIVCYKCNNYGHFAREC------ATESVTCYNCSGQGHVAKDCT---- 73
+ S+A + G C++C GHFAREC A CY C H+++DC
Sbjct: 4 EASTAKRHRAEGGNNCHRCGQPGHFARECPNVPPGAMGDRACYTCGQPDHLSRDCPSNRG 63
Query: 74 ---VKSSIICYNCNSSGHFARNCPN-----------DSSKRCYACHQAGHMAKECPGQTA 119
+ CYNC GHF+R CPN + CY C Q GH ++ECP
Sbjct: 64 PAPMGGGRACYNCGQPGHFSRECPNMRGGPMGGAPMGGGRACYNCGQPGHFSRECPNMRG 123
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G + CY CG GH S +C
Sbjct: 124 GPMGGAPMGGGRACYNCGQPGHFSREC 150
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 64/170 (37%), Gaps = 32/170 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------------ES 56
CY C H CP G G CY C GHF+REC
Sbjct: 45 CYTCGQPDHLSRDCPSNRGPAPMGG--GRACYNCGQPGHFSRECPNMRGGPMGGAPMGGG 102
Query: 57 VTCYNCSGQGHVAKDCT-----------VKSSIICYNCNSSGHFARNCPNDSSKR----- 100
CYNC GH +++C + CYNC GHF+R CPN
Sbjct: 103 RACYNCGQPGHFSRECPNMRGGPMGGAPMGGGRACYNCGQPGHFSRECPNMRGGNMGGGR 162
Query: 101 -CYACHQAGHMAKECPG-QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
CY C Q GH+A+ECP + CY CG GHLS C +
Sbjct: 163 ACYHCQQEGHIARECPNAPADAAAGGAAAGGGRACYNCGQPGHLSRACPV 212
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 32/80 (40%), Gaps = 16/80 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---------- 58
CYNC GH+ CP + G CY C GH AREC
Sbjct: 137 CYNCGQPGHFSRECPNMRGGNM---GGGRACYHCQQEGHIARECPNAPADAAAGGAAAGG 193
Query: 59 ---CYNCSGQGHVAKDCTVK 75
CYNC GH+++ C VK
Sbjct: 194 GRACYNCGQPGHLSRACPVK 213
>gi|289540930|gb|ADD09601.1| zinc knuckle (ccHc-type) family protein [Trifolium repens]
Length = 274
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 66/117 (56%), Gaps = 13/117 (11%)
Query: 31 RGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFA 90
RG +C C GH+AREC +V C+NCS GH+A +C+ KS +C+NC GH A
Sbjct: 43 RGFSQDNLCKNCKRPGHYARECPNIAV-CHNCSLPGHIASECSTKS--LCWNCKEPGHMA 99
Query: 91 RNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPE-PVVDMSLTCYVCGHQGHLSYDC 146
CPN+ C+ C + GH A+EC +P+ P D+ L C C QGH++ +C
Sbjct: 100 STCPNEGI--CHTCGKTGHRAREC------TTPQMPPGDLRL-CNNCYKQGHIAVEC 147
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 66/143 (46%), Gaps = 32/143 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NC GHY CP + VC+ C+ GH A EC+T+S+ C+NC GH+
Sbjct: 51 CKNCKRPGHYARECPNIA-----------VCHNCSLPGHIASECSTKSL-CWNCKEPGHM 98
Query: 69 AKDCTVKSSIICYNCNSSGHFARNC-----PNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
A C + IC+ C +GH AR C P + C C++ GH+A EC + A
Sbjct: 99 ASTCPNEG--ICHTCGKTGHRARECTTPQMPPGDLRLCNNCYKQGHIAVECTNEKA---- 152
Query: 124 EPVVDMSLTCYVCGHQGHLSYDC 146
C C GHL+ DC
Sbjct: 153 ---------CNNCRKTGHLARDC 166
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 62/143 (43%), Gaps = 32/143 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+NC GH C KS +C+ C GH A C E + C+ C GH
Sbjct: 70 CHNCSLPGHIASECSTKS-----------LCWNCKEPGHMASTCPNEGI-CHTCGKTGHR 117
Query: 69 AKDCTVKSSI-----ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
A++CT +C NC GH A C N+ K C C + GH+A++CP
Sbjct: 118 ARECTTPQMPPGDLRLCNNCYKQGHIAVECTNE--KACNNCRKTGHLARDCPN------- 168
Query: 124 EPVVDMSLTCYVCGHQGHLSYDC 146
+P+ C +C GH++ C
Sbjct: 169 DPI------CNLCNVSGHVARQC 185
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 55/157 (35%), Gaps = 46/157 (29%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
M C NC+ GH C + + C C GH AR+C + + C
Sbjct: 126 MPPGDLRLCNNCYKQGHIAVECTNEKA-----------CNNCRKTGHLARDCPNDPI-CN 173
Query: 61 NCSGQGHVAKDCTVKSSI---------------------------------ICYNCNSSG 87
C+ GHVA+ C + I +C NC G
Sbjct: 174 LCNVSGHVARQCPKSNVIGDRSGGGSFRGGGGYRDGGGSFHSGGGGGYRDVVCRNCQQFG 233
Query: 88 HFARNCPNDSSKRCYACHQAGHMAKECP-GQTAGKSP 123
H +R+C C+ C GH+A ECP G+ + P
Sbjct: 234 HMSRDCMGGPLMICHNCGGRGHLAYECPSGRFVDRYP 270
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 18/83 (21%)
Query: 79 ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC-----------PGQTAGKSPEPVV 127
+C NC GH+AR CPN + C+ C GH+A EC PG A P +
Sbjct: 50 LCKNCKRPGHYARECPNIAV--CHNCSLPGHIASECSTKSLCWNCKEPGHMASTCPNEGI 107
Query: 128 DMSLTCYVCGHQGHLSYDCKLVQ 150
C+ CG GH + +C Q
Sbjct: 108 -----CHTCGKTGHRARECTTPQ 125
>gi|221222214|gb|ACM09768.1| Cellular nucleic acid-binding protein [Salmo salar]
Length = 143
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 20/152 (13%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKV---GIVCYKCNNYGHFARECATESVTC 59
S+ +C+ C GH+ +CP+ + + CY+C GH AR+C C
Sbjct: 2 EMSSSECFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDAC 61
Query: 60 YNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
YNC GH+++DC + CY+C +GH + C +CY C + GH+A +C
Sbjct: 62 YNCHRSGHISRDCKEPKKEREQCCYSCGKAGHIQKLC---DKVKCYRCGEIGHVAVQCSK 118
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+ + CY CG+ GHL+ +C +
Sbjct: 119 AS-----------EVNCYKCGNTGHLAKECTI 139
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 21/107 (19%)
Query: 56 SVTCYNCSGQGHVAKDC------------TVKSSIICYNCNSSGHFARNCPNDSSKRCYA 103
S C+ C GH K+C + CY C GH AR+C + CY
Sbjct: 5 SSECFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHIARDC-EQTEDACYN 63
Query: 104 CHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
CH++GH++++C EP + CY CG GH+ C V+
Sbjct: 64 CHRSGHISRDCK--------EPKKEREQCCYSCGKAGHIQKLCDKVK 102
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 13/70 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES-VTCYNCSGQGH 67
CY+C GH Q C DKV CY+C GH A +C+ S V CY C GH
Sbjct: 85 CYSCGKAGHIQKLC----------DKVK--CYRCGEIGHVAVQCSKASEVNCYKCGNTGH 132
Query: 68 VAKDCTVKSS 77
+AK+CT++++
Sbjct: 133 LAKECTIEAT 142
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 24/89 (26%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR------------CYACHQAGHMAKECPGQTAGKSP 123
SS C+ C GH+ +NCP + CY C + GH+A++C
Sbjct: 4 SSSECFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHIARDC--------- 54
Query: 124 EPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
E D CY C GH+S DCK +K
Sbjct: 55 EQTED---ACYNCHRSGHISRDCKEPKKE 80
>gi|388851384|emb|CCF54969.1| related to GIS2-Putative zinc finger protein, proposed to be
involved in the RAS/cAMP signaling pathway [Ustilago
hordei]
Length = 182
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 60/131 (45%), Gaps = 26/131 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-------------TE 55
CY C + GH CP ++ G CY+C +GH AR C
Sbjct: 50 CYKCNETGHISRDCP--TNPAPAAGGPGGECYRCGQHGHIARACPDAGSSSRGGFGGARG 107
Query: 56 SVTCYNCSGQGHVAKDCTVKSSII-----------CYNCNSSGHFARNCPNDSSKRCYAC 104
+CYNC G GH+++DCT + CYNCN SGH +R CP +K CY C
Sbjct: 108 GRSCYNCGGVGHLSRDCTSPAGAGAGAGAGAGGQRCYNCNESGHISRECPKPQTKSCYRC 167
Query: 105 HQAGHMAKECP 115
+ GH++ CP
Sbjct: 168 GEEGHISSACP 178
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 72/172 (41%), Gaps = 50/172 (29%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT--------CY 60
CYNC GH C ++ CYKCN GH +R+C T CY
Sbjct: 28 CYNCGQQGHISSQCGMEAQPK--------TCYKCNETGHISRDCPTNPAPAAGGPGGECY 79
Query: 61 NCSGQGHVAKDCT------------VKSSIICYNCNSSGHFARNCPNDSS---------- 98
C GH+A+ C + CYNC GH +R+C + +
Sbjct: 80 RCGQHGHIARACPDAGSSSRGGFGGARGGRSCYNCGGVGHLSRDCTSPAGAGAGAGAGAG 139
Query: 99 -KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
+RCY C+++GH+++ECP + +CY CG +GH+S C V
Sbjct: 140 GQRCYNCNESGHISRECP-----------KPQTKSCYRCGEEGHISSACPQV 180
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 62/119 (52%), Gaps = 10/119 (8%)
Query: 38 VCYKCNNYGHFARECATE-SVTCYNCSGQGHVAKDCTVKSSI-ICYNCNSSGHFARNCPN 95
C+ C GH A C T + +CYNC QGH++ C +++ CY CN +GH +R+CP
Sbjct: 6 TCFNCGQPGHNAAACPTAGNPSCYNCGQQGHISSQCGMEAQPKTCYKCNETGHISRDCPT 65
Query: 96 DSSK-------RCYACHQAGHMAKECP-GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ + CY C Q GH+A+ CP ++ + +CY CG GHLS DC
Sbjct: 66 NPAPAAGGPGGECYRCGQHGHIARACPDAGSSSRGGFGGARGGRSCYNCGGVGHLSRDC 124
>gi|406606389|emb|CCH42163.1| Gag-Pol polyprotein [Wickerhamomyces ciferrii]
Length = 180
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 71/159 (44%), Gaps = 32/159 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES--VTCYNCSGQG 66
CYNC + GH CP+ + CY C GH C ++ CYNCS G
Sbjct: 29 CYNCSNPGHQANDCPEPRQDTQK------QCYGCGGVGHVQSNCTEQAKGTRCYNCSQFG 82
Query: 67 HVAKDC-----------------TVKSSIICYNCNSSGHFARNCPNDSSKRCYAC-HQAG 108
H++K+C + + CY C HFAR+C K CYAC Q G
Sbjct: 83 HISKECPEPQQERPQRSFNQRPRSNNKATTCYKCGGPNHFARDCQAGVVK-CYACGSQDG 141
Query: 109 HMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
H+AK+C + G V + TCY CG GH+S DC+
Sbjct: 142 HLAKDCTSASGG-----VNTSTKTCYKCGDVGHISRDCR 175
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCP 94
CY C GH A C E CYNCS GH A DC CY C GH NC
Sbjct: 8 TCYVCGQAGHLAEACTQEERLCYNCSNPGHQANDCPEPRQDTQKQCYGCGGVGHVQSNCT 67
Query: 95 NDS-SKRCYACHQAGHMAKECPGQTAGKSPEPVVDM-------SLTCYVCGHQGHLSYDC 146
+ RCY C Q GH++KECP + + P+ + + TCY CG H + DC
Sbjct: 68 EQAKGTRCYNCSQFGHISKECP-EPQQERPQRSFNQRPRSNNKATTCYKCGGPNHFARDC 126
Query: 147 K 147
+
Sbjct: 127 Q 127
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 55/120 (45%), Gaps = 24/120 (20%)
Query: 7 IQCYNCFDFGHYQYSCPQKS--------SADARGDKVGIVCYKCNNYGHFARECATESVT 58
+CYNC FGH CP+ + R + CYKC HFAR+C V
Sbjct: 73 TRCYNCSQFGHISKECPEPQQERPQRSFNQRPRSNNKATTCYKCGGPNHFARDCQAGVVK 132
Query: 59 CYNCSGQ-GHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
CY C Q GH+AKDCT S + N S+K CY C GH++++C G+
Sbjct: 133 CYACGSQDGHLAKDCTSASGGV---------------NTSTKTCYKCGDVGHISRDCRGE 177
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN---DSSKRCYACHQAGHMAKEC 114
TCY C GH+A+ CT + +CYNC++ GH A +CP D+ K+CY C GH+ C
Sbjct: 8 TCYVCGQAGHLAEACT-QEERLCYNCSNPGHQANDCPEPRQDTQKQCYGCGGVGHVQSNC 66
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
Q G CY C GH+S +C Q+
Sbjct: 67 TEQAKG----------TRCYNCSQFGHISKECPEPQQE 94
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 12/60 (20%)
Query: 99 KRCYACHQAGHMAKEC------------PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY C QAGH+A+ C PG A PEP D CY CG GH+ +C
Sbjct: 7 RTCYVCGQAGHLAEACTQEERLCYNCSNPGHQANDCPEPRQDTQKQCYGCGGVGHVQSNC 66
>gi|378734858|gb|EHY61317.1| cellular nucleic acid-binding protein [Exophiala dermatitidis
NIH/UT8656]
Length = 182
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 72/185 (38%), Gaps = 56/185 (30%)
Query: 9 CYNCFDFGHYQYSCPQKS-------------SADARGDKVGIVCYKCNNYGHFAREC--- 52
CYNC D H CP+K S + CYKC N GH AR+C
Sbjct: 5 CYNCGDSSHQARDCPKKGTPTCYNCGAEGHVSRECTAAPKPKSCYKCGNEGHLARDCQAA 64
Query: 53 ------------------ATESVTCYNCSGQGHVAKDCTVKSSI-------------ICY 81
+ CY C GQGH+A+DCT CY
Sbjct: 65 PAGGAGGGWGNVGGNAYGGGSARECYRCGGQGHIARDCTSGGQGGYGGGYSRGGGGQTCY 124
Query: 82 NCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGH 141
+C GH +R+C +++CY C + GH++++CP + + + CY C GH
Sbjct: 125 SCGGVGHMSRDCTQGRAQKCYNCGEQGHLSRDCPSEASSE---------RICYKCKQPGH 175
Query: 142 LSYDC 146
L C
Sbjct: 176 LQSAC 180
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 61/134 (45%), Gaps = 27/134 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADAR-----------GDKVGIVCYKCNNYGHFARECATESV 57
CY C + GH C + A G CY+C GH AR+C +
Sbjct: 48 CYKCGNEGHLARDCQAAPAGGAGGGWGNVGGNAYGGGSARECYRCGGQGHIARDCTSGGQ 107
Query: 58 --------------TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS--KRC 101
TCY+C G GH+++DCT + CYNC GH +R+CP+++S + C
Sbjct: 108 GGYGGGYSRGGGGQTCYSCGGVGHMSRDCTQGRAQKCYNCGEQGHLSRDCPSEASSERIC 167
Query: 102 YACHQAGHMAKECP 115
Y C Q GH+ CP
Sbjct: 168 YKCKQPGHLQSACP 181
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGI----VCYKCNNYGHFARECAT-ESVTC 59
S +CY C GH C G CY C GH +R+C + C
Sbjct: 85 SARECYRCGGQGHIARDCTSGGQGGYGGGYSRGGGGQTCYSCGGVGHMSRDCTQGRAQKC 144
Query: 60 YNCSGQGHVAKDCTVKSS--IICYNCNSSGHFARNCPN 95
YNC QGH+++DC ++S ICY C GH CPN
Sbjct: 145 YNCGEQGHLSRDCPSEASSERICYKCKQPGHLQSACPN 182
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 10/68 (14%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
CYNC S H AR+CP + CY C GH+++EC TA P+ +CY CG++
Sbjct: 5 CYNCGDSSHQARDCPKKGTPTCYNCGAEGHVSREC---TAAPKPK-------SCYKCGNE 54
Query: 140 GHLSYDCK 147
GHL+ DC+
Sbjct: 55 GHLARDCQ 62
>gi|119489207|ref|XP_001262855.1| zinc knuckle domain protein [Neosartorya fischeri NRRL 181]
gi|119411013|gb|EAW20958.1| zinc knuckle domain protein [Neosartorya fischeri NRRL 181]
Length = 237
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 66/153 (43%), Gaps = 42/153 (27%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQ-KSSADARGDKVGIVCYKCNNYGHFARECAT------- 54
+T T QCYNC GH Q CP + + A G CY CN GH AR C
Sbjct: 46 TTETKQCYNCQGLGHVQADCPTLRLNGGANGR-----CYNCNQPGHLARNCPAPASGAGR 100
Query: 55 ---------------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
+ TCY C G H A+DC ++ CY C GH +R+C
Sbjct: 101 GVGAPRGGFNGGFRGGYSGYPRAATCYKCGGPNHFARDCQAH-AMKCYACGKLGHISRDC 159
Query: 94 --PN-----DSSKRCYACHQAGHMAKECPGQTA 119
PN + K CY C QAGH++++CP A
Sbjct: 160 TAPNGGPLSSAGKVCYKCSQAGHISRDCPNNEA 192
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 74/198 (37%), Gaps = 70/198 (35%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TESVTCY 60
S CY C + GHY C S+ R +CY C GH + C TE+ CY
Sbjct: 4 SRRACYKCGNIGHYAEVC----SSSER------LCYNCKQPGHESSSCPRPRTTETKQCY 53
Query: 61 NCSGQGHVAKDCTV-----KSSIICYNCNSSGHFARNCPNDSS----------------- 98
NC G GHV DC ++ CYNCN GH ARNCP +S
Sbjct: 54 NCQGLGHVQADCPTLRLNGGANGRCYNCNQPGHLARNCPAPASGAGRGVGAPRGGFNGGF 113
Query: 99 ------------------------------KRCYACHQAGHMAKECPGQTAGKSPEPVVD 128
+CYAC + GH++++C G P+
Sbjct: 114 RGGYSGYPRAATCYKCGGPNHFARDCQAHAMKCYACGKLGHISRDCTAPNGG----PLSS 169
Query: 129 MSLTCYVCGHQGHLSYDC 146
CY C GH+S DC
Sbjct: 170 AGKVCYKCSQAGHISRDC 187
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 60/134 (44%), Gaps = 24/134 (17%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + CYNC GH +CP
Sbjct: 7 ACYKCGNIGHYAEVCSSSERLCYNCKQPGHESSSCPRPRTTETKQCYNCQGLGHVQADCP 66
Query: 95 N-----DSSKRCYACHQAGHMAKECPGQTAGK-----SPEPVV-----------DMSLTC 133
++ RCY C+Q GH+A+ CP +G +P + TC
Sbjct: 67 TLRLNGGANGRCYNCNQPGHLARNCPAPASGAGRGVGAPRGGFNGGFRGGYSGYPRAATC 126
Query: 134 YVCGHQGHLSYDCK 147
Y CG H + DC+
Sbjct: 127 YKCGGPNHFARDCQ 140
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 25/123 (20%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKV------------------GIVCYKC 42
++ + +CYNC GH +CP +S RG CYKC
Sbjct: 70 LNGGANGRCYNCNQPGHLARNCPAPASGAGRGVGAPRGGFNGGFRGGYSGYPRAATCYKC 129
Query: 43 NNYGHFARECATESVTCYNCSGQGHVAKDCTVK-------SSIICYNCNSSGHFARNCPN 95
HFAR+C ++ CY C GH+++DCT + +CY C+ +GH +R+CPN
Sbjct: 130 GGPNHFARDCQAHAMKCYACGKLGHISRDCTAPNGGPLSSAGKVCYKCSQAGHISRDCPN 189
Query: 96 DSS 98
+ +
Sbjct: 190 NEA 192
>gi|239609786|gb|EEQ86773.1| zinc knuckle domain-containing protein [Ajellomyces dermatitidis
ER-3]
gi|327353830|gb|EGE82687.1| zinc knuckle domain-containing protein [Ajellomyces dermatitidis
ATCC 18188]
Length = 226
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 68/159 (42%), Gaps = 30/159 (18%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
+T T QCY+C GH Q CP + G CY CN GH AR C + +
Sbjct: 46 TTETKQCYHCQGLGHVQADCP---TLRINGGATSGRCYNCNLPGHLARNCLSAGM----- 97
Query: 63 SGQGHVAKDCTVKSSI---------------ICYNCNSSGHFARNCPNDSSKRCYACHQA 107
QG + V+ +CY C HFAR+C + K CYAC +
Sbjct: 98 --QGAMRGAPAVRGGFNPPFRGGFVGYPRAAMCYKCGGPNHFARDCQAQAMK-CYACGKL 154
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GH++++C G P+ + CY C GH+S DC
Sbjct: 155 GHISRDCTAPNGG----PLSSVGKVCYKCSQAGHISRDC 189
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 26/122 (21%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADA---------------RGDKVG----IVCYKCNN 44
++ +CYNC GH +C A RG VG +CYKC
Sbjct: 74 ATSGRCYNCNLPGHLARNCLSAGMQGAMRGAPAVRGGFNPPFRGGFVGYPRAAMCYKCGG 133
Query: 45 YGHFARECATESVTCYNCSGQGHVAKDCTVK-----SSI--ICYNCNSSGHFARNCPNDS 97
HFAR+C +++ CY C GH+++DCT SS+ +CY C+ +GH +R+CPN++
Sbjct: 134 PNHFARDCQAQAMKCYACGKLGHISRDCTAPNGGPLSSVGKVCYKCSQAGHISRDCPNNA 193
Query: 98 SK 99
++
Sbjct: 194 TE 195
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 61/155 (39%), Gaps = 46/155 (29%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + CY+C GH +CP
Sbjct: 7 ACYKCGNIGHYAEVCSSAERLCYNCKQPGHESNGCPRPRTTETKQCYHCQGLGHVQADCP 66
Query: 95 ------NDSSKRCYACHQAGHMAKEC------------PGQTAGKSPE--------PVVD 128
+S RCY C+ GH+A+ C P G +P P
Sbjct: 67 TLRINGGATSGRCYNCNLPGHLARNCLSAGMQGAMRGAPAVRGGFNPPFRGGFVGYPRAA 126
Query: 129 M-----------------SLTCYVCGHQGHLSYDC 146
M ++ CY CG GH+S DC
Sbjct: 127 MCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDC 161
>gi|322695117|gb|EFY86931.1| hypothetical protein MAC_07048 [Metarhizium acridum CQMa 102]
Length = 156
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 63/127 (49%), Gaps = 23/127 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----------- 57
CY C GH CP + A G + CYKC GH AR C+
Sbjct: 32 CYKCGQPGHISRECPLGGAGGASGAQS-TECYKCGEIGHIARNCSKAGGSYGGSFGGGYG 90
Query: 58 ------TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS---KRCYACHQAG 108
TCY+C G GH++++C + + CYNC SGH++R+CP +SS K CY C QAG
Sbjct: 91 GGGAGKTCYSCGGYGHMSRECV--NGMKCYNCGESGHYSRDCPKESSGGEKICYKCQQAG 148
Query: 109 HMAKECP 115
H+ CP
Sbjct: 149 HVQSACP 155
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 65/162 (40%), Gaps = 42/162 (25%)
Query: 10 YNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT---------ESVTCY 60
YNC GH C + + CYKC GH +REC +S CY
Sbjct: 10 YNCGGEGHMSRDCSEPMKENK-------SCYKCGQPGHISRECPLGGAGGASGAQSTECY 62
Query: 61 NCSGQGHVAKDCTVKSSI----------------ICYNCNSSGHFARNCPNDSSKRCYAC 104
C GH+A++C+ CY+C GH +R C N +CY C
Sbjct: 63 KCGEIGHIARNCSKAGGSYGGSFGGGYGGGGAGKTCYSCGGYGHMSRECVN--GMKCYNC 120
Query: 105 HQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++GH +++CP +++G CY C GH+ C
Sbjct: 121 GESGHYSRDCPKESSGGEK--------ICYKCQQAGHVQSAC 154
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGI-------VCYKCNNYGHFARECATESVT 58
+ +CY C + GH +C + + G CY C YGH +REC +
Sbjct: 58 STECYKCGEIGHIARNCSKAGGSYGGSFGGGYGGGGAGKTCYSCGGYGHMSRECVN-GMK 116
Query: 59 CYNCSGQGHVAKDCTVKSS---IICYNCNSSGHFARNCPN 95
CYNC GH ++DC +SS ICY C +GH CPN
Sbjct: 117 CYNCGESGHYSRDCPKESSGGEKICYKCQQAGHVQSACPN 156
>gi|322710312|gb|EFZ01887.1| zinc knuckle domain protein [Metarhizium anisopliae ARSEF 23]
Length = 182
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 63/127 (49%), Gaps = 23/127 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----------- 57
CY C GH CP + A G + CYKC GH AR C+
Sbjct: 58 CYKCGQPGHISRECPLGGAGGAGGAQS-TECYKCGEIGHIARNCSKAGGSYGGSFGGGYG 116
Query: 58 ------TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS---KRCYACHQAG 108
TCY+C G GH++++C + + CYNC SGH++R+CP +SS K CY C QAG
Sbjct: 117 GGGAGKTCYSCGGYGHMSRECV--NGMKCYNCGESGHYSRDCPKESSGGEKICYKCQQAG 174
Query: 109 HMAKECP 115
H+ CP
Sbjct: 175 HVQSACP 181
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 38 VCYKCNNYGHFARECATES-VTCYNCSGQGHVAKDCT--VKSSIICYNCNSSGHFARNCP 94
CY C N GH AR+C ++ CYNC G+GH+++DC+ +K + CY C GH +R CP
Sbjct: 13 ACYSCGNPGHQARDCPSKGPAKCYNCGGEGHMSRDCSEPMKENKSCYKCGQPGHISRECP 72
Query: 95 --------NDSSKRCYACHQAGHMAKECP-----GQTAGKSPEPVVDMSLTCYVCGHQGH 141
S CY C + GH+A+ C + TCY CG GH
Sbjct: 73 LGGAGGAGGAQSTECYKCGEIGHIARNCSKAGGSYGGSFGGGYGGGGAGKTCYSCGGYGH 132
Query: 142 LSYDC 146
+S +C
Sbjct: 133 MSREC 137
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 68/165 (41%), Gaps = 49/165 (29%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT---ESVTCYNCSGQ 65
CY+C + GH CP K A CY C GH +R+C+ E+ +CY C
Sbjct: 14 CYSCGNPGHQARDCPSKGPAK---------CYNCGGEGHMSRDCSEPMKENKSCYKCGQP 64
Query: 66 GHVAKDCTVKS--------SIICYNCNSSGHFARNCPN----------------DSSKRC 101
GH++++C + S CY C GH ARNC + K C
Sbjct: 65 GHISRECPLGGAGGAGGAQSTECYKCGEIGHIARNCSKAGGSYGGSFGGGYGGGGAGKTC 124
Query: 102 YACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
Y+C GHM++EC + CY CG GH S DC
Sbjct: 125 YSCGGYGHMSRECVN-------------GMKCYNCGESGHYSRDC 156
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 68/169 (40%), Gaps = 42/169 (24%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-------- 54
S +CYNC GH C + K CYKC GH +REC
Sbjct: 29 SKGPAKCYNCGGEGHMSRDCSEPM-------KENKSCYKCGQPGHISRECPLGGAGGAGG 81
Query: 55 -ESVTCYNCSGQGHVAKDCTVKSSI----------------ICYNCNSSGHFARNCPNDS 97
+S CY C GH+A++C+ CY+C GH +R C N
Sbjct: 82 AQSTECYKCGEIGHIARNCSKAGGSYGGSFGGGYGGGGAGKTCYSCGGYGHMSRECVN-- 139
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+CY C ++GH +++CP +++G CY C GH+ C
Sbjct: 140 GMKCYNCGESGHYSRDCPKESSGG--------EKICYKCQQAGHVQSAC 180
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGI-------VCYKCNNYGHFARECATESVT 58
+ +CY C + GH +C + + G CY C YGH +REC +
Sbjct: 84 STECYKCGEIGHIARNCSKAGGSYGGSFGGGYGGGGAGKTCYSCGGYGHMSRECVN-GMK 142
Query: 59 CYNCSGQGHVAKDCTVKSS---IICYNCNSSGHFARNCPN 95
CYNC GH ++DC +SS ICY C +GH CPN
Sbjct: 143 CYNCGESGHYSRDCPKESSGGEKICYKCQQAGHVQSACPN 182
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
Query: 73 TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLT 132
T + CY+C + GH AR+CP+ +CY C GHM+++C EP+ + + +
Sbjct: 7 TGATRGACYSCGNPGHQARDCPSKGPAKCYNCGGEGHMSRDCS--------EPMKE-NKS 57
Query: 133 CYVCGHQGHLSYDCKL 148
CY CG GH+S +C L
Sbjct: 58 CYKCGQPGHISRECPL 73
>gi|116784713|gb|ABK23446.1| unknown [Picea sitchensis]
Length = 243
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 68/162 (41%), Gaps = 29/162 (17%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGI--------VCYKCNNYGHFARECA 53
SS C NC GHY CP S + G I +C C GH A +C
Sbjct: 44 SSRPVELCNNCKRTGHYARECPNASVCNNCGVSGHIASKCPKEQLCRNCKKPGHLAADCR 103
Query: 54 TESVTCYNCSGQGHVAKDCT-----VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAG 108
E V C C GH+AK+C+ + S +C C GH +CPND K C C Q G
Sbjct: 104 NEPV-CNMCGKTGHLAKECSAHELGLPKSALCKKCYLPGHIMADCPND--KACNNCRQTG 160
Query: 109 HMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
H+A++C S C CG GHL DC VQ
Sbjct: 161 HLARDCVN-------------SPVCNGCGEPGHLVRDCPRVQ 189
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 48/131 (36%), Gaps = 31/131 (23%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C C GH C SA G +C KC GH +C + C NC GH+
Sbjct: 108 CNMCGKTGHLAKEC----SAHELGLPKSALCKKCYLPGHIMADCPNDK-ACNNCRQTGHL 162
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSSKR------------------------CYAC 104
A+DC +S +C C GH R+CP S C C
Sbjct: 163 ARDCV--NSPVCNGCGEPGHLVRDCPRVQSPPRIMPPRGGFGGGFGGGFDDFKIIICRVC 220
Query: 105 HQAGHMAKECP 115
GH++ +CP
Sbjct: 221 GGRGHLSVDCP 231
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 40/121 (33%), Gaps = 36/121 (29%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
+ + C C+ GH CP + C C GH AR+C V C
Sbjct: 126 LGLPKSALCKKCYLPGHIMADCPNDKA-----------CNNCRQTGHLARDCVNSPV-CN 173
Query: 61 NCSGQGHVAKDCTVKSS------------------------IICYNCNSSGHFARNCPND 96
C GH+ +DC S IIC C GH + +CP+D
Sbjct: 174 GCGEPGHLVRDCPRVQSPPRIMPPRGGFGGGFGGGFDDFKIIICRVCGGRGHLSVDCPSD 233
Query: 97 S 97
Sbjct: 234 P 234
>gi|441674301|ref|XP_004092503.1| PREDICTED: zinc finger CCHC domain-containing protein 13 [Nomascus
leucogenys]
Length = 170
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 35 VGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFAR 91
+ CY C G A+ C CYNC GH+AKDC + CYNC GH AR
Sbjct: 43 LSYTCYCCGESGRHAKNCVLLGNICYNCGRSGHIAKDCKEPKRERHQHCYNCGRLGHLAR 102
Query: 92 NCPNDSSKRCYACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSY 144
+C ++CY+C + GH+ K+C G+ S +TCY CG GHL+
Sbjct: 103 DCDRQKEQKCYSCGKLGHIQKDCAQVKCYRCGEIGHVSINCSKASEVTCYRCGKSGHLAK 162
Query: 145 DC 146
+C
Sbjct: 163 EC 164
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE-SVTCYNCSGQGH 67
CYNC GH C + + CY C GH AR+C + CY+C GH
Sbjct: 67 CYNCGRSGHIAKDCKEPKRERHQH------CYNCGRLGHLARDCDRQKEQKCYSCGKLGH 120
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQT 118
+ KDC + + CY C GH + NC S CY C ++GH+AKECP +
Sbjct: 121 IQKDC---AQVKCYRCGEIGHVSINCSKASEVTCYRCGKSGHLAKECPSEV 168
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 51/100 (51%), Gaps = 15/100 (15%)
Query: 54 TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHM 110
T S TCY C G AK+C + +I CYNC SGH A++C +R CY C + GH+
Sbjct: 42 TLSYTCYCCGESGRHAKNCVLLGNI-CYNCGRSGHIAKDCKEPKRERHQHCYNCGRLGHL 100
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
A++C Q K CY CG GH+ DC V+
Sbjct: 101 ARDCDRQKEQK-----------CYSCGKLGHIQKDCAQVK 129
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 13/66 (19%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES-VTCYNCSGQG 66
+CY+C GH Q C Q + CY+C GH + C+ S VTCY C G
Sbjct: 111 KCYSCGKLGHIQKDCAQ------------VKCYRCGEIGHVSINCSKASEVTCYRCGKSG 158
Query: 67 HVAKDC 72
H+AK+C
Sbjct: 159 HLAKEC 164
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 9/51 (17%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE 55
+ ++CY C + GH +C + S + CY+C GH A+EC +E
Sbjct: 126 AQVKCYRCGEIGHVSINCSKASE---------VTCYRCGKSGHLAKECPSE 167
>gi|57648428|gb|AAW55909.1| zinc finger protein 8 [Trypanosoma cruzi]
Length = 192
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 71/150 (47%), Gaps = 24/150 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-----TCYNCS 63
C+ C GH SCP + +AR CY+C GH +R+C + +C++C
Sbjct: 49 CFFCQQAGHRANSCPL-APPEARQP-----CYRCGEEGHISRDCTNPRLPRSEQSCFHCH 102
Query: 64 GQGHVAKDCT-VKSSIICYNCNSSGHFARNCPNDSSK-----RCYACHQAGHMAKECPGQ 117
GH A++C V ++ C +C +GH AR CP C+ C GH+A+ CP
Sbjct: 103 KAGHYARECPEVIENLKCNSCGVTGHIARRCPERIRTARAFYPCFRCGMQGHVARNCPNT 162
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ CYVCG +GHL+ DCK
Sbjct: 163 RLPYEEQ-------LCYVCGEKGHLARDCK 185
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 35/167 (20%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE----SVTCYNC 62
+ CY C GH C + + +C++C GH +++CA++ + C+ C
Sbjct: 1 MVCYRCGGVGHTSRDCSRPVNES--------LCFRCGKPGHMSKDCASDIDVKNAPCFFC 52
Query: 63 SGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKR----CYACHQAGHMAKECP 115
GH A C + ++ CY C GH +R+C N R C+ CH+AGH A+ECP
Sbjct: 53 QQAGHRANSCPLAPPEARQPCYRCGEEGHISRDCTNPRLPRSEQSCFHCHKAGHYARECP 112
Query: 116 --------------GQTAGKSPEPVVDMSL--TCYVCGHQGHLSYDC 146
G A + PE + C+ CG QGH++ +C
Sbjct: 113 EVIENLKCNSCGVTGHIARRCPERIRTARAFYPCFRCGMQGHVARNC 159
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 22/130 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQG 66
CY C + GH C + R + C+ C+ GH+AREC E++ C +C G
Sbjct: 73 CYRCGEEGHISRDC-----TNPRLPRSEQSCFHCHKAGHYARECPEVIENLKCNSCGVTG 127
Query: 67 HVAKDC-----TVKSSIICYNCNSSGHFARNCPND----SSKRCYACHQAGHMAKECPGQ 117
H+A+ C T ++ C+ C GH ARNCPN + CY C + GH+A++C
Sbjct: 128 HIARRCPERIRTARAFYPCFRCGMQGHVARNCPNTRLPYEEQLCYVCGEKGHLARDC--- 184
Query: 118 TAGKSPEPVV 127
KS P+V
Sbjct: 185 ---KSEAPLV 191
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-----ESVT 58
++C +C GH CP++ R + C++C GH AR C E
Sbjct: 115 IENLKCNSCGVTGHIARRCPER----IRTARAFYPCFRCGMQGHVARNCPNTRLPYEEQL 170
Query: 59 CYNCSGQGHVAKDCTVKSSII 79
CY C +GH+A+DC ++ ++
Sbjct: 171 CYVCGEKGHLARDCKSEAPLV 191
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 78 IICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVC 136
++CY C GH +R+C ++ C+ C + GHM+K+C K+ C+ C
Sbjct: 1 MVCYRCGGVGHTSRDCSRPVNESLCFRCGKPGHMSKDCASDIDVKN--------APCFFC 52
Query: 137 GHQGHLSYDCKLV 149
GH + C L
Sbjct: 53 QQAGHRANSCPLA 65
>gi|212546049|ref|XP_002153178.1| zinc knuckle nucleic acid binding protein, putative [Talaromyces
marneffei ATCC 18224]
gi|210064698|gb|EEA18793.1| zinc knuckle nucleic acid binding protein, putative [Talaromyces
marneffei ATCC 18224]
Length = 246
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 63/153 (41%), Gaps = 17/153 (11%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
+T T QCY+C GH Q CP + G G CY C GH R C T +
Sbjct: 46 TTETKQCYHCQGLGHVQADCP---TLRLNGGANGGRCYSCGQAGHLVRNCPTPNAQPGAG 102
Query: 63 SGQG---------HVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKE 113
G G + CY C HFAR+C + K CYAC + GH++++
Sbjct: 103 RGSGAPRGNFGGSFRGGFGGYPRAATCYKCGGPNHFARDCQAQAMK-CYACGKLGHISRD 161
Query: 114 CPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C G P+ CY C GH+S DC
Sbjct: 162 CTAPNGG----PLSSAGKVCYKCSQAGHISRDC 190
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 27/119 (22%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGI--------------------VCYKCNNYGH 47
+CY+C GH +CP ++ G G CYKC H
Sbjct: 78 RCYSCGQAGHLVRNCPTPNAQPGAGRGSGAPRGNFGGSFRGGFGGYPRAATCYKCGGPNH 137
Query: 48 FARECATESVTCYNCSGQGHVAKDCTVK-------SSIICYNCNSSGHFARNCPNDSSK 99
FAR+C +++ CY C GH+++DCT + +CY C+ +GH +R+CP + +K
Sbjct: 138 FARDCQAQAMKCYACGKLGHISRDCTAPNGGPLSSAGKVCYKCSQAGHISRDCPTNENK 196
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 70/181 (38%), Gaps = 61/181 (33%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTCY 60
S CY C + GHY C SSA+ +CY C GH + C TE+ CY
Sbjct: 4 SRRACYKCGNIGHYAEVC---SSAER-------LCYNCKQPGHESNACPRPRTTETKQCY 53
Query: 61 NCSGQGHVAKDCTV------KSSIICYNCNSSGHFARNCPNDSSK--------------- 99
+C G GHV DC + CY+C +GH RNCP +++
Sbjct: 54 HCQGLGHVQADCPTLRLNGGANGGRCYSCGQAGHLVRNCPTPNAQPGAGRGSGAPRGNFG 113
Query: 100 --------------RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYD 145
CY C H A++C Q ++ CY CG GH+S D
Sbjct: 114 GSFRGGFGGYPRAATCYKCGGPNHFARDCQAQ------------AMKCYACGKLGHISRD 161
Query: 146 C 146
C
Sbjct: 162 C 162
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 61/138 (44%), Gaps = 29/138 (21%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + CY+C GH +CP
Sbjct: 7 ACYKCGNIGHYAEVCSSAERLCYNCKQPGHESNACPRPRTTETKQCYHCQGLGHVQADCP 66
Query: 95 N------DSSKRCYACHQAGHMAKECP--------GQTAGKSPEPVV-----------DM 129
+ RCY+C QAGH+ + CP G+ +G +P
Sbjct: 67 TLRLNGGANGGRCYSCGQAGHLVRNCPTPNAQPGAGRGSG-APRGNFGGSFRGGFGGYPR 125
Query: 130 SLTCYVCGHQGHLSYDCK 147
+ TCY CG H + DC+
Sbjct: 126 AATCYKCGGPNHFARDCQ 143
>gi|119496265|ref|XP_001264906.1| zinc knuckle domain protein [Neosartorya fischeri NRRL 181]
gi|119413068|gb|EAW23009.1| zinc knuckle domain protein [Neosartorya fischeri NRRL 181]
Length = 170
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 57/126 (45%), Gaps = 21/126 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADA--RGDKVGIVCYKCNNYGHFARECA------------- 53
CY C GH C Q S D G CYKC GH AR C+
Sbjct: 46 CYRCGVAGHISRECSQAGSGDNYNGAPSGGQECYKCGQVGHIARNCSQGGNYGGGFGHGG 105
Query: 54 --TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS--SKRCYACHQAGH 109
TCY+C G GH+A+DCT CYNC GH +R+CP ++ + CY C Q GH
Sbjct: 106 YGGRQQTCYSCGGFGHMARDCTHGQK--CYNCGDVGHVSRDCPTEAKGERVCYKCKQPGH 163
Query: 110 MAKECP 115
+ CP
Sbjct: 164 VQAACP 169
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGI-----VCYKCNNYGHFARECATESVTCYNC 62
+CY C GH +C Q + G CY C +GH AR+C T CYNC
Sbjct: 77 ECYKCGQVGHIARNCSQGGNYGGGFGHGGYGGRQQTCYSCGGFGHMARDC-THGQKCYNC 135
Query: 63 SGQGHVAKDCTV--KSSIICYNCNSSGHFARNCPN 95
GHV++DC K +CY C GH CPN
Sbjct: 136 GDVGHVSRDCPTEAKGERVCYKCKQPGHVQAACPN 170
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 66/161 (40%), Gaps = 45/161 (27%)
Query: 23 PQKSSADARGDKVGIVCYK-----CNNYGHFAREC--ATESVTCYNCSGQGHVAKDCTVK 75
P+KS A ++ IV + GH +REC A + +CY C GH++++C+
Sbjct: 3 PKKSPAAMPRIRLAIVLRRELLLATIGQGHVSRECTVAPKEKSCYRCGVAGHISRECSQA 62
Query: 76 SS-----------IICYNCNSSGHFARNCPN--------------DSSKRCYACHQAGHM 110
S CY C GH ARNC + CY+C GHM
Sbjct: 63 GSGDNYNGAPSGGQECYKCGQVGHIARNCSQGGNYGGGFGHGGYGGRQQTCYSCGGFGHM 122
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
A++C T G+ CY CG GH+S DC K
Sbjct: 123 ARDC---THGQK----------CYNCGDVGHVSRDCPTEAK 150
>gi|148666814|gb|EDK99230.1| cellular nucleic acid binding protein, isoform CRA_c [Mus musculus]
Length = 149
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQ 65
+ CYNC GH C + + CY C GH AR+C + CY+C
Sbjct: 44 VTCYNCGRGGHIAKDCKEPKREREQ------CCYNCGKPGHLARDCDHADEQKCYSCGEF 97
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
GH+ KDCT + CY C +GH A NC S CY C ++GH+A+EC
Sbjct: 98 GHIQKDCT---KVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 143
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 57 VTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKE 113
VTCYNC GH+AKDC + CYNC GH AR+C + ++CY+C + GH+ K+
Sbjct: 44 VTCYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKD 103
Query: 114 CP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
C G+T + + CY CG GHL+ +C +
Sbjct: 104 CTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 145
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 90 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 137
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 138 HLARECTIEAT 148
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 14/79 (17%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSL 131
+ + CYNC GH A++C +R CY C + GH+A++C K
Sbjct: 41 RRMVTCYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK---------- 90
Query: 132 TCYVCGHQGHLSYDCKLVQ 150
CY CG GH+ DC V+
Sbjct: 91 -CYSCGEFGHIQKDCTKVK 108
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 9/52 (17%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES 56
+ ++CY C + GH +C + S + CY+C GH AREC E+
Sbjct: 105 TKVKCYRCGETGHVAINCSKTSEVN---------CYRCGESGHLARECTIEA 147
>gi|212534810|ref|XP_002147561.1| zinc knuckle transcription factor (CnjB), putative [Talaromyces
marneffei ATCC 18224]
gi|210069960|gb|EEA24050.1| zinc knuckle transcription factor (CnjB), putative [Talaromyces
marneffei ATCC 18224]
Length = 459
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 71/149 (47%), Gaps = 21/149 (14%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-----ESVTCYNC 62
+C NC + GH SC Q+ + R V I C C+ GH AR+C + C NC
Sbjct: 263 KCVNCGELGHIAKSCKQERTMIER---VEIKCVNCSEVGHRARDCTKQREQRDKFACRNC 319
Query: 63 SGQGHVAKDCTVKSS---IICYNCNSSGHFARNCPNDS--SKRCYACHQAGHMAKECPGQ 117
H A DCT + I C CN +GHFA++CPN ++ C C H++++C Q
Sbjct: 320 GSPDHKAVDCTEPPNLDHIECRRCNQNGHFAKDCPNAPKFARACRKCGAEDHLSRDCGQQ 379
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+D+ +TC C GH + DC
Sbjct: 380 QN-------MDL-ITCNNCDETGHYARDC 400
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 56/132 (42%), Gaps = 23/132 (17%)
Query: 33 DKVGIVCYKCNNYGHFARECATE-------SVTCYNCSGQGHVAKDCTV----KSSIICY 81
D++ C C GH A+ C E + C NCS GH A+DCT + C
Sbjct: 258 DRLIPKCVNCGELGHIAKSCKQERTMIERVEIKCVNCSEVGHRARDCTKQREQRDKFACR 317
Query: 82 NCNSSGHFARNC---PNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGH 138
NC S H A +C PN C C+Q GH AK+CP + C CG
Sbjct: 318 NCGSPDHKAVDCTEPPNLDHIECRRCNQNGHFAKDCPN---------APKFARACRKCGA 368
Query: 139 QGHLSYDCKLVQ 150
+ HLS DC Q
Sbjct: 369 EDHLSRDCGQQQ 380
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 17/130 (13%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE---SVTCYNCSGQ 65
C NC H C + + D I C +CN GHFA++C + C C +
Sbjct: 316 CRNCGSPDHKAVDCTEPPNLDH------IECRRCNQNGHFAKDCPNAPKFARACRKCGAE 369
Query: 66 GHVAKDCTVKSS---IICYNCNSSGHFARNC--PNDSSK-RCYACHQAGHMAKE--CPGQ 117
H+++DC + + I C NC+ +GH+AR+C P D S+ +C C + GH ++ G+
Sbjct: 370 DHLSRDCGQQQNMDLITCNNCDETGHYARDCPKPRDWSRVKCSNCGEMGHTNQDEHGVGK 429
Query: 118 TAGKSPEPVV 127
A S PV+
Sbjct: 430 AAWGSAAPVL 439
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 38/93 (40%), Gaps = 6/93 (6%)
Query: 28 ADARGDKVGIVCYKCNNYGHFARECATE----SVTCYNCSGQGHVAKDCTVKSSI--ICY 81
D G +C C + GHFAREC S C+NC +GH DC C
Sbjct: 35 GDDSGHPRDDICRNCGHSGHFARECPEPRQGGSGACFNCGEEGHNKVDCPHPRVFQGTCR 94
Query: 82 NCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
CN GH A CP + C C GH EC
Sbjct: 95 VCNEEGHPASECPQKPADICKNCRGEGHKTSEC 127
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 9/88 (10%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSGQ 65
C NC GH+ CP+ + C+ C GH +C V TC C+ +
Sbjct: 46 CRNCGHSGHFARECPEPRQGGS------GACFNCGEEGHNKVDCPHPRVFQGTCRVCNEE 99
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNC 93
GH A +C K + IC NC GH C
Sbjct: 100 GHPASECPQKPADICKNCRGEGHKTSEC 127
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 79 ICYNCNSSGHFARNCPNDS---SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
IC NC SGHFAR CP S C+ C + GH +C P P V TC V
Sbjct: 45 ICRNCGHSGHFARECPEPRQGGSGACFNCGEEGHNKVDC--------PHPRV-FQGTCRV 95
Query: 136 CGHQGHLSYDC 146
C +GH + +C
Sbjct: 96 CNEEGHPASEC 106
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 16/98 (16%)
Query: 59 CYNCSGQGHVAKDCTVKS---SIICYNCNSSGHFARNCPNDS--SKRCYACHQAGHMAKE 113
C NC GH A++C S C+NC GH +CP+ C C++ GH A E
Sbjct: 46 CRNCGHSGHFARECPEPRQGGSGACFNCGEEGHNKVDCPHPRVFQGTCRVCNEEGHPASE 105
Query: 114 CPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
CP + A C C +GH + +C +K
Sbjct: 106 CPQKPAD-----------ICKNCRGEGHKTSECNENRK 132
>gi|335306820|ref|XP_003360587.1| PREDICTED: cellular nucleic acid-binding protein, partial [Sus
scrofa]
Length = 97
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCP 94
+CY+C GH A++C + CYNC GH+AKDC + CYNC GH AR+C
Sbjct: 11 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 70
Query: 95 NDSSKRCYACHQAGHMAKEC 114
+ ++CY+C + GH+ K+C
Sbjct: 71 HADEQKCYSCGEFGHIQKDC 90
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 15/96 (15%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKEC 114
CY C GH+AKDC ++ CYNC GH A++C +R CY C + GH+A++C
Sbjct: 11 ICYRCGESGHLAKDCDLQEDA-CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 69
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
K CY CG GH+ DC V+
Sbjct: 70 DHADEQK-----------CYSCGEFGHIQKDCTKVK 94
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 11/75 (14%)
Query: 74 VKSSI--ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSL 131
V SS+ ICY C SGH A++C + CY C + GH+AK+C EP +
Sbjct: 4 VSSSLPDICYRCGESGHLAKDC-DLQEDACYNCGRGGHIAKDCK--------EPKREREQ 54
Query: 132 TCYVCGHQGHLSYDC 146
CY CG GHL+ DC
Sbjct: 55 CCYNCGKPGHLARDC 69
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 14/97 (14%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT-- 58
+SS+ CY C + GH C + A CY C GH A++C
Sbjct: 4 VSSSLPDICYRCGESGHLAKDCDLQEDA----------CYNCGRGGHIAKDCKEPKRERE 53
Query: 59 --CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
CYNC GH+A+DC CY+C GH ++C
Sbjct: 54 QCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 90
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQGH 67
CYNC GH C + + CY C GH AR+C + CY+C GH
Sbjct: 32 CYNCGRGGHIAKDCKEPKREREQ------CCYNCGKPGHLARDCDHADEQKCYSCGEFGH 85
Query: 68 VAKDCTVKSSIICYN 82
+ KDCT + CY
Sbjct: 86 IQKDCT---KVKCYR 97
>gi|9369368|gb|AAF87117.1|AC006434_13 F10A5.22 [Arabidopsis thaliana]
Length = 265
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 75/170 (44%), Gaps = 42/170 (24%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC------ATESV 57
T+ +C+NC + GH +C + +C+ C GH AR+C A +
Sbjct: 98 TAESRCWNCREPGHVASNCSNEG-----------ICHSCGKSGHRARDCSNSDSRAGDLR 146
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP-- 115
C NC QGH+A DCT + C NC +SGH AR+C ND C C +GH+A+ CP
Sbjct: 147 LCNNCFKQGHLAADCTNDKA--CKNCRTSGHIARDCRNDPV--CNICSISGHVARHCPKG 202
Query: 116 -------------------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G + V + C+ CG +GH +Y+C
Sbjct: 203 DSNYSDRGSRVRDGGMQRGGLSRMSRDREGVSAMIICHNCGGRGHRAYEC 252
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 11/111 (9%)
Query: 36 GIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
G +C C GHFAR+C+ SV C NC GH+A +CT +S C+NC GH A NC N
Sbjct: 62 GNLCNNCKRPGHFARDCSNVSV-CNNCGLPGHIAAECTAESR--CWNCREPGHVASNCSN 118
Query: 96 DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ C++C ++GH A++C S D+ L C C QGHL+ DC
Sbjct: 119 EGI--CHSCGKSGHRARDCS-----NSDSRAGDLRL-CNNCFKQGHLAADC 161
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 64/144 (44%), Gaps = 32/144 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NC GH+ C S VC C GH A EC ES C+NC GHV
Sbjct: 65 CNNCKRPGHFARDCSNVS-----------VCNNCGLPGHIAAECTAES-RCWNCREPGHV 112
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS-----KRCYACHQAGHMAKECPGQTAGKSP 123
A +C+ + IC++C SGH AR+C N S + C C + GH+A +C A
Sbjct: 113 ASNCSNEG--ICHSCGKSGHRARDCSNSDSRAGDLRLCNNCFKQGHLAADCTNDKA---- 166
Query: 124 EPVVDMSLTCYVCGHQGHLSYDCK 147
C C GH++ DC+
Sbjct: 167 ---------CKNCRTSGHIARDCR 181
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 43/118 (36%), Gaps = 44/118 (37%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NCF GH +AD DK C C GH AR+C + V C CS GHV
Sbjct: 148 CNNCFKQGHL--------AADCTNDKA---CKNCRTSGHIARDCRNDPV-CNICSISGHV 195
Query: 69 AKDCT--------------------------------VKSSIICYNCNSSGHFARNCP 94
A+ C V + IIC+NC GH A CP
Sbjct: 196 ARHCPKGDSNYSDRGSRVRDGGMQRGGLSRMSRDREGVSAMIICHNCGGRGHRAYECP 253
>gi|225465385|ref|XP_002273825.1| PREDICTED: zinc finger protein GIS2-like [Vitis vinifera]
Length = 158
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
+C KC GHFAR+C +V C NC GH+A +C S+ IC+NC SGH A CPND
Sbjct: 51 LCNKCKRPGHFARDCPNVTV-CNNCGLPGHIAAECN--STTICWNCKESGHLASQCPNDL 107
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C+ C + GH+A++C + P D L C C GH++ DC
Sbjct: 108 V--CHMCGKMGHLARDCSCPSL-----PTHDARL-CNNCYKPGHIATDC 148
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 17/75 (22%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------T 58
ST C+NC + GH CP +VC+ C GH AR+C+ S+
Sbjct: 86 STTICWNCKESGHLASQCPN-----------DLVCHMCGKMGHLARDCSCPSLPTHDARL 134
Query: 59 CYNCSGQGHVAKDCT 73
C NC GH+A DCT
Sbjct: 135 CNNCYKPGHIATDCT 149
>gi|261199101|ref|XP_002625952.1| zinc knuckle domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239595104|gb|EEQ77685.1| zinc knuckle domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 226
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 67/159 (42%), Gaps = 30/159 (18%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
+T T QCY+C GH Q CP + G CY CN GH AR C + +
Sbjct: 46 TTETKQCYHCQGLGHVQADCP---TLRINGGATSGRCYNCNLPGHLARNCLSAGM----- 97
Query: 63 SGQGHVAKDCTVKSSI---------------ICYNCNSSGHFARNCPNDSSKRCYACHQA 107
QG + V+ +CY C HFAR+C + K CYAC +
Sbjct: 98 --QGAMRGAPAVRGGFNPPFRGGFMGYPRAAMCYKCGGPNHFARDCQAQAMK-CYACGKL 154
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GH++++C G P+ CY C GH+S DC
Sbjct: 155 GHISRDCTAPNGG----PLSSAGKVCYKCSQAGHISRDC 189
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 26/122 (21%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADA---------------RGDKVG----IVCYKCNN 44
++ +CYNC GH +C A RG +G +CYKC
Sbjct: 74 ATSGRCYNCNLPGHLARNCLSAGMQGAMRGAPAVRGGFNPPFRGGFMGYPRAAMCYKCGG 133
Query: 45 YGHFARECATESVTCYNCSGQGHVAKDCTVK-------SSIICYNCNSSGHFARNCPNDS 97
HFAR+C +++ CY C GH+++DCT + +CY C+ +GH +R+CPN++
Sbjct: 134 PNHFARDCQAQAMKCYACGKLGHISRDCTAPNGGPLSSAGKVCYKCSQAGHISRDCPNNA 193
Query: 98 SK 99
++
Sbjct: 194 TE 195
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 61/155 (39%), Gaps = 46/155 (29%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + CY+C GH +CP
Sbjct: 7 ACYKCGNIGHYAEVCSSAERLCYNCKQPGHESNGCPRPRTTETKQCYHCQGLGHVQADCP 66
Query: 95 ------NDSSKRCYACHQAGHMAKEC------------PGQTAGKSPE--------PVVD 128
+S RCY C+ GH+A+ C P G +P P
Sbjct: 67 TLRINGGATSGRCYNCNLPGHLARNCLSAGMQGAMRGAPAVRGGFNPPFRGGFMGYPRAA 126
Query: 129 M-----------------SLTCYVCGHQGHLSYDC 146
M ++ CY CG GH+S DC
Sbjct: 127 MCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDC 161
>gi|294470718|gb|ADE80751.1| cold shock domain protein 1 [Eutrema salsugineum]
Length = 263
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 68/168 (40%), Gaps = 31/168 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE------------- 55
CY+C + GH C D CY C + GHFAR+C +
Sbjct: 100 CYHCGEVGHMAKDCSSSDRGDR----SSGGCYTCGDTGHFARDCVQKSSGNGGSGGERGG 155
Query: 56 -SVTCYNCSGQGHVAKDCTVKS-----------SIICYNCNSSGHFARNCPNDSSK-RCY 102
CYNC GH A+DC KS +CYNC +GH AR+CP CY
Sbjct: 156 AGGECYNCGNTGHFARDCVQKSVGNVGDRGSGGGGVCYNCGGAGHMARDCPTKRQPGACY 215
Query: 103 ACHQAGHMAKECP-GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
C GHMA++C + G C+ CG GH + +C +
Sbjct: 216 ECGGTGHMARDCDRRGSGGGRGNAGGGGGGNCFKCGQGGHFARECSVA 263
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 68/153 (44%), Gaps = 40/153 (26%)
Query: 24 QKSSADARGDKVGIVCYKCNNYGHFAREC------ATESVTCYNCSGQGHVAKDCTVKSS 77
++ S+ G + G CY C GH A++C S CY C GH A+DC KSS
Sbjct: 85 KEISSRGNGARRGGSCYHCGEVGHMAKDCSSSDRGDRSSGGCYTCGDTGHFARDCVQKSS 144
Query: 78 II-------------CYNCNSSGHFARNCPNDSSKR-----------CYACHQAGHMAKE 113
CYNC ++GHFAR+C S CY C AGHMA++
Sbjct: 145 GNGGSGGERGGAGGECYNCGNTGHFARDCVQKSVGNVGDRGSGGGGVCYNCGGAGHMARD 204
Query: 114 CPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CP + + P CY CG GH++ DC
Sbjct: 205 CPTK---RQPG-------ACYECGGTGHMARDC 227
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 51/102 (50%), Gaps = 16/102 (15%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADA--RGDKVGIVCYKCNNYGHFARECAT--ESVTCYNCS 63
+CYNC + GH+ C QKS + RG G VCY C GH AR+C T + CY C
Sbjct: 159 ECYNCGNTGHFARDCVQKSVGNVGDRGSGGGGVCYNCGGAGHMARDCPTKRQPGACYECG 218
Query: 64 GQGHVAKDCTVKSSII------------CYNCNSSGHFARNC 93
G GH+A+DC + S C+ C GHFAR C
Sbjct: 219 GTGHMARDCDRRGSGGGRGNAGGGGGGNCFKCGQGGHFAREC 260
>gi|330915670|ref|XP_003297115.1| hypothetical protein PTT_07428 [Pyrenophora teres f. teres 0-1]
gi|311330354|gb|EFQ94773.1| hypothetical protein PTT_07428 [Pyrenophora teres f. teres 0-1]
Length = 215
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 72/176 (40%), Gaps = 43/176 (24%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---- 58
S+S CYNC GH CP + + + CY C GH +C T ++
Sbjct: 23 SSSERLCYNCKQPGHESNGCPHPRTTETK------QCYHCQGVGHVQADCPTLRLSGAGT 76
Query: 59 ---CYNCSGQGHVAKDCTVKS-------------------------SIICYNCNSSGHFA 90
CY+C GH+A++C CY C HFA
Sbjct: 77 SGRCYSCGLAGHLARNCPSPGMGRGAGAPRGGYGGGFRGGFAGGARPATCYKCGGPNHFA 136
Query: 91 RNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
R+C + K CYAC + GH++++C G P+ TCY CG GH+S DC
Sbjct: 137 RDCQAQAMK-CYACGKLGHISRDCTAPNGG----PLNTAGKTCYRCGETGHISRDC 187
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 56/133 (42%), Gaps = 23/133 (17%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCP 94
C+KC N GH+A C++ CYNC GH + C + CY+C GH +CP
Sbjct: 8 ACFKCGNVGHYAEVCSSSERLCYNCKQPGHESNGCPHPRTTETKQCYHCQGVGHVQADCP 67
Query: 95 N------DSSKRCYACHQAGHMAKECPGQ--------------TAGKSPEPVVDMSLTCY 134
+S RCY+C AGH+A+ CP + TCY
Sbjct: 68 TLRLSGAGTSGRCYSCGLAGHLARNCPSPGMGRGAGAPRGGYGGGFRGGFAGGARPATCY 127
Query: 135 VCGHQGHLSYDCK 147
CG H + DC+
Sbjct: 128 KCGGPNHFARDCQ 140
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S C+ C + GH+A C + S + CY C Q GH + CP P + CY
Sbjct: 5 SRRACFKCGNVGHYAEVC-SSSERLCYNCKQPGHESNGCP--------HPRTTETKQCYH 55
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ DC ++ S
Sbjct: 56 CQGVGHVQADCPTLRLS 72
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 18/73 (24%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA--------TESVTCY 60
CY C H+ C ++ + CY C GH +R+C T TCY
Sbjct: 126 CYKCGGPNHFARDCQAQA----------MKCYACGKLGHISRDCTAPNGGPLNTAGKTCY 175
Query: 61 NCSGQGHVAKDCT 73
C GH+++DCT
Sbjct: 176 RCGETGHISRDCT 188
>gi|189197609|ref|XP_001935142.1| zinc knuckle domain containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187981090|gb|EDU47716.1| zinc knuckle domain containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 215
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 72/176 (40%), Gaps = 43/176 (24%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---- 58
S+S CYNC GH CP + + + CY C GH +C T ++
Sbjct: 23 SSSERLCYNCKQPGHESNGCPHPRTTETK------QCYHCQGVGHVQADCPTLRLSGAGT 76
Query: 59 ---CYNCSGQGHVAKDCTVKS-------------------------SIICYNCNSSGHFA 90
CY+C GH+A++C CY C HFA
Sbjct: 77 SGRCYSCGLAGHLARNCPSPGMGRGAGAPRGGYGGGFRGGFAGGARPATCYKCGGPNHFA 136
Query: 91 RNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
R+C + K CYAC + GH++++C G P+ TCY CG GH+S DC
Sbjct: 137 RDCQAQAMK-CYACGKLGHISRDCTAPNGG----PLNTAGKTCYRCGETGHISRDC 187
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 56/133 (42%), Gaps = 23/133 (17%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCP 94
C+KC N GH+A C++ CYNC GH + C + CY+C GH +CP
Sbjct: 8 ACFKCGNVGHYAEVCSSSERLCYNCKQPGHESNGCPHPRTTETKQCYHCQGVGHVQADCP 67
Query: 95 N------DSSKRCYACHQAGHMAKECPGQ--------------TAGKSPEPVVDMSLTCY 134
+S RCY+C AGH+A+ CP + TCY
Sbjct: 68 TLRLSGAGTSGRCYSCGLAGHLARNCPSPGMGRGAGAPRGGYGGGFRGGFAGGARPATCY 127
Query: 135 VCGHQGHLSYDCK 147
CG H + DC+
Sbjct: 128 KCGGPNHFARDCQ 140
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S C+ C + GH+A C + S + CY C Q GH + CP P + CY
Sbjct: 5 SRRACFKCGNVGHYAEVC-SSSERLCYNCKQPGHESNGCP--------HPRTTETKQCYH 55
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ DC ++ S
Sbjct: 56 CQGVGHVQADCPTLRLS 72
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 18/73 (24%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA--------TESVTCY 60
CY C H+ C ++ + CY C GH +R+C T TCY
Sbjct: 126 CYKCGGPNHFARDCQAQA----------MKCYACGKLGHISRDCTAPNGGPLNTAGKTCY 175
Query: 61 NCSGQGHVAKDCT 73
C GH+++DCT
Sbjct: 176 RCGETGHISRDCT 188
>gi|47026923|gb|AAT08682.1| ring zinc finger protein [Hyacinthus orientalis]
Length = 196
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 11/123 (8%)
Query: 24 QKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNC 83
++ + RG + ++C C GHFAR+C+ +V C NC GH+A +CT K+ +C+NC
Sbjct: 30 RRDPREHRGFRQDVICKNCKRPGHFARDCSHIAV-CNNCGLPGHIAAECTAKT--LCWNC 86
Query: 84 NSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLS 143
GH A C N++ C+ C++ GH+A++C +G S D L C C GH++
Sbjct: 87 KEPGHMANECSNEAV--CHNCNKTGHLARDC--SASGLS---SFDTRL-CNNCHRPGHIA 138
Query: 144 YDC 146
DC
Sbjct: 139 ADC 141
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 21/118 (17%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT----- 58
T+ C+NC + GH C ++ VC+ CN GH AR+C+ ++
Sbjct: 78 TAKTLCWNCKEPGHMANECSNEA-----------VCHNCNKTGHLARDCSASGLSSFDTR 126
Query: 59 -CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
C NC GH+A DCT + C NC GH AR C ND C C+ +GH+A++CP
Sbjct: 127 LCNNCHRPGHIAADCT--NDKTCNNCRKPGHLARECTNDPV--CNVCNVSGHVARQCP 180
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 33/72 (45%), Gaps = 12/72 (16%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
+SS T C NC GH +AD DK C C GH AREC + V C
Sbjct: 120 LSSFDTRLCNNCHRPGHI--------AADCTNDK---TCNNCRKPGHLARECTNDPV-CN 167
Query: 61 NCSGQGHVAKDC 72
C+ GHVA+ C
Sbjct: 168 VCNVSGHVARQC 179
>gi|148666816|gb|EDK99232.1| cellular nucleic acid binding protein, isoform CRA_e [Mus musculus]
Length = 142
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQ 65
+ CYNC GH C + + CY C GH AR+C + CY+C
Sbjct: 37 VTCYNCGRGGHIAKDCKEPKREREQ------CCYNCGKPGHLARDCDHADEQKCYSCGEF 90
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
GH+ KDCT + CY C +GH A NC S CY C ++GH+A+EC
Sbjct: 91 GHIQKDCT---KVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 136
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 57 VTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKE 113
VTCYNC GH+AKDC + CYNC GH AR+C + ++CY+C + GH+ K+
Sbjct: 37 VTCYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKD 96
Query: 114 CP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
C G+T + + CY CG GHL+ +C +
Sbjct: 97 CTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 138
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 83 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 130
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 131 HLARECTIEAT 141
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 14/79 (17%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSL 131
+ + CYNC GH A++C +R CY C + GH+A++C K
Sbjct: 34 RRMVTCYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQK---------- 83
Query: 132 TCYVCGHQGHLSYDCKLVQ 150
CY CG GH+ DC V+
Sbjct: 84 -CYSCGEFGHIQKDCTKVK 101
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 9/53 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV 57
+ ++CY C + GH +C + S + CY+C GH AREC E+
Sbjct: 98 TKVKCYRCGETGHVAINCSKTSEVN---------CYRCGESGHLARECTIEAT 141
>gi|326483283|gb|EGE07293.1| zinc knuckle domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 210
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 35/140 (25%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV------CYKCNNYGHFARECATE------- 55
CY C GH CP S D CYKC GH AR C+ +
Sbjct: 72 CYRCGMTGHISRECPSSGSGDNNYSGGYSGGSGGQECYKCGQVGHIARNCSQQGGSGYGG 131
Query: 56 ------------------SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
S TCY+C G GH+A+DCT CYNC GH +R+CP ++
Sbjct: 132 GYGNSGSGSYGSGGYGGRSQTCYSCGGYGHMARDCTQGQK--CYNCGEVGHVSRDCPTEA 189
Query: 98 --SKRCYACHQAGHMAKECP 115
+ CY C QAGH+ CP
Sbjct: 190 KGERVCYKCKQAGHVQAACP 209
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 59/133 (44%), Gaps = 30/133 (22%)
Query: 49 ARECATESV-TCYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARNCPNDSS-------- 98
AR+C + TCYNC GQGHV+++CT CY C +GH +R CP+ S
Sbjct: 39 ARDCPKKGTPTCYNCGGQGHVSRECTQPPKEKSCYRCGMTGHISRECPSSGSGDNNYSGG 98
Query: 99 -------KRCYACHQAGHMAKECPGQ-------------TAGKSPEPVVDMSLTCYVCGH 138
+ CY C Q GH+A+ C Q + S TCY CG
Sbjct: 99 YSGGSGGQECYKCGQVGHIARNCSQQGGSGYGGGYGNSGSGSYGSGGYGGRSQTCYSCGG 158
Query: 139 QGHLSYDCKLVQK 151
GH++ DC QK
Sbjct: 159 YGHMARDCTQGQK 171
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 46/105 (43%), Gaps = 18/105 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGI---------------VCYKCNNYGHFAREC 52
+CY C GH +C Q+ + G CY C YGH AR+C
Sbjct: 107 ECYKCGQVGHIARNCSQQGGSGYGGGYGNSGSGSYGSGGYGGRSQTCYSCGGYGHMARDC 166
Query: 53 ATESVTCYNCSGQGHVAKDCTV--KSSIICYNCNSSGHFARNCPN 95
T+ CYNC GHV++DC K +CY C +GH CPN
Sbjct: 167 -TQGQKCYNCGEVGHVSRDCPTEAKGERVCYKCKQAGHVQAACPN 210
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 58/155 (37%), Gaps = 54/155 (34%)
Query: 38 VCYKCNNYGHFAREC--ATESVTCYNCSGQGHVAKDCTVKSS---------------IIC 80
CY C GH +REC + +CY C GH++++C S C
Sbjct: 49 TCYNCGGQGHVSRECTQPPKEKSCYRCGMTGHISRECPSSGSGDNNYSGGYSGGSGGQEC 108
Query: 81 YNCNSSGHFARNCPND------------------------SSKRCYACHQAGHMAKECPG 116
Y C GH ARNC S+ CY+C GHMA++C
Sbjct: 109 YKCGQVGHIARNCSQQGGSGYGGGYGNSGSGSYGSGGYGGRSQTCYSCGGYGHMARDC-- 166
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
T G+ CY CG GH+S DC K
Sbjct: 167 -TQGQK----------CYNCGEVGHVSRDCPTEAK 190
>gi|255931619|ref|XP_002557366.1| Pc12g05190 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581985|emb|CAP80146.1| Pc12g05190 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 182
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 58/129 (44%), Gaps = 26/129 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-------------- 54
CY C GH CPQ ++ G CYKC GH AR C+
Sbjct: 57 CYRCGQTGHLSRECPQGGDSNYGGGSQ--ECYKCGQVGHIARNCSQGGNYGGYSAGGYGG 114
Query: 55 ------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS--SKRCYACHQ 106
TCY+C G GH+A+DCT CYNC GH +R+CP ++ + CY C Q
Sbjct: 115 FGGAGGRQQTCYSCGGFGHMARDCT--QGQKCYNCGEVGHVSRDCPTEAKGERMCYKCKQ 172
Query: 107 AGHMAKECP 115
GH+ CP
Sbjct: 173 PGHVQSACP 181
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 69/172 (40%), Gaps = 47/172 (27%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQG 66
C+NC + H CP+K G+ Y CN GH +REC + +CY C G
Sbjct: 11 CFNCGEASHQAKDCPKK------GNPTCPNSYNCNGQGHLSRECQEPAKEKSCYRCGQTG 64
Query: 67 HVAKDCTV-------KSSIICYNCNSSGHFARNCPNDS-------------------SKR 100
H++++C S CY C GH ARNC +
Sbjct: 65 HLSRECPQGGDSNYGGGSQECYKCGQVGHIARNCSQGGNYGGYSAGGYGGFGGAGGRQQT 124
Query: 101 CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
CY+C GHMA++C T G+ CY CG GH+S DC K
Sbjct: 125 CYSCGGFGHMARDC---TQGQK----------CYNCGEVGHVSRDCPTEAKG 163
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 46/164 (28%)
Query: 10 YNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--------ATESVTCYN 61
YNC GH C + + + CY+C GH +REC S CY
Sbjct: 36 YNCNGQGHLSRECQEPAKEKS--------CYRCGQTGHLSRECPQGGDSNYGGGSQECYK 87
Query: 62 CSGQGHVAKDCTVKSSI-------------------ICYNCNSSGHFARNCPNDSSKRCY 102
C GH+A++C+ + CY+C GH AR+C ++CY
Sbjct: 88 CGQVGHIARNCSQGGNYGGYSAGGYGGFGGAGGRQQTCYSCGGFGHMARDC--TQGQKCY 145
Query: 103 ACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C + GH++++CP + G+ CY C GH+ C
Sbjct: 146 NCGEVGHVSRDCPTEAKGE---------RMCYKCKQPGHVQSAC 180
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 44/103 (42%), Gaps = 13/103 (12%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGI----------VCYKCNNYGHFARECAT 54
+ +CY C GH +C Q + CY C +GH AR+C T
Sbjct: 81 GSQECYKCGQVGHIARNCSQGGNYGGYSAGGYGGFGGAGGRQQTCYSCGGFGHMARDC-T 139
Query: 55 ESVTCYNCSGQGHVAKDCTV--KSSIICYNCNSSGHFARNCPN 95
+ CYNC GHV++DC K +CY C GH CPN
Sbjct: 140 QGQKCYNCGEVGHVSRDCPTEAKGERMCYKCKQPGHVQSACPN 182
>gi|426249733|ref|XP_004018604.1| PREDICTED: cellular nucleic acid-binding protein isoform 1 [Ovis
aries]
Length = 176
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADA-------------RG-----DKVGIVCYKCNNYG 46
S+ +C+ C GH+ CP RG + +CY+C G
Sbjct: 2 SSNECFKCGRSGHWARECPAGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESG 61
Query: 47 HFARECATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRCYA 103
A++ CYNC GH+AKDC + CYNC GH AR+C + ++CY+
Sbjct: 62 PPAKD-WIRGGPCYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYS 120
Query: 104 CHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
C + GH+ K+C G+T + + CY CG GHL+ +C +
Sbjct: 121 CGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTI 172
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 117 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAINCSKTSEVNCYRCGESG 164
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 165 HLARECTIEAT 175
>gi|16797820|gb|AAL29186.1|AF204398_1 poly-zinc finger protein 2 [Trypanosoma cruzi]
Length = 192
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 71/150 (47%), Gaps = 24/150 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-----TCYNCS 63
C+ C GH +CP + +AR CY+C GH +R+C + +C++C
Sbjct: 49 CFFCQQAGHRANNCPL-APPEARQP-----CYRCGEEGHISRDCTNPRLPRSKQSCFHCH 102
Query: 64 GQGHVAKDC-TVKSSIICYNCNSSGHFARNCPNDSSK-----RCYACHQAGHMAKECPGQ 117
GH A++C V ++ C +C +GH AR CP C+ C GH+A+ CP
Sbjct: 103 KTGHYARECRIVIENLKCNSCGVTGHIARRCPERIRTARAFYPCFRCGMQGHVARNCPNT 162
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ CYVCG +GHL+ DCK
Sbjct: 163 RLPYEEQ-------LCYVCGEKGHLARDCK 185
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 22/130 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQG 66
CY C + GH C + R + C+ C+ GH+AREC E++ C +C G
Sbjct: 73 CYRCGEEGHISRDC-----TNPRLPRSKQSCFHCHKTGHYARECRIVIENLKCNSCGVTG 127
Query: 67 HVAKDC-----TVKSSIICYNCNSSGHFARNCPND----SSKRCYACHQAGHMAKECPGQ 117
H+A+ C T ++ C+ C GH ARNCPN + CY C + GH+A++C
Sbjct: 128 HIARRCPERIRTARAFYPCFRCGMQGHVARNCPNTRLPYEEQLCYVCGEKGHLARDC--- 184
Query: 118 TAGKSPEPVV 127
KS P+V
Sbjct: 185 ---KSEAPLV 191
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 15/121 (12%)
Query: 37 IVCYKCNNYGHFARECA--TESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFAR 91
+VCY+C GH +R+C+ C+ C GH++KDC + C+ C +GH A
Sbjct: 1 MVCYRCGGVGHTSRDCSRPVNESLCFRCGKPGHMSKDCASDIDVKNAPCFFCQQAGHRAN 60
Query: 92 NC---PNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
NC P ++ + CY C + GH++++C +S + +C+ C GH + +C++
Sbjct: 61 NCPLAPPEARQPCYRCGEEGHISRDCTNPRLPRSKQ-------SCFHCHKTGHYARECRI 113
Query: 149 V 149
V
Sbjct: 114 V 114
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-----ESVT 58
++C +C GH CP++ R + C++C GH AR C E
Sbjct: 115 IENLKCNSCGVTGHIARRCPER----IRTARAFYPCFRCGMQGHVARNCPNTRLPYEEQL 170
Query: 59 CYNCSGQGHVAKDCTVKSSII 79
CY C +GH+A+DC ++ ++
Sbjct: 171 CYVCGEKGHLARDCKSEAPLV 191
>gi|449664234|ref|XP_002161873.2| PREDICTED: probable ATP-dependent RNA helicase DDX4 [Hydra
magnipapillata]
Length = 815
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 17/118 (14%)
Query: 39 CYKCNNYGHFARECATESV-----TCYNCSGQGHVAKDCTVKSS---IICYNCNSSGHFA 90
C+KC GH +REC C+ C +GH+++DC S C+ C GH +
Sbjct: 72 CHKCGKEGHMSRECPDGGGGGGGRACFKCKQEGHMSRDCPQGGSGGGRACHKCGKEGHMS 131
Query: 91 RNCPNDSS--KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
R CP+ + C+ C Q GHM+K+CP G S TC+ CG +GH+S +C
Sbjct: 132 RECPDGGGGGRACFKCKQEGHMSKDCPQGGGGGG-------SRTCHKCGKEGHMSREC 182
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTCYNCSG 64
C+ C GH CP D G G C+KC GH +R+C + C+ C
Sbjct: 72 CHKCGKEGHMSRECP-----DGGGGGGGRACFKCKQEGHMSRDCPQGGSGGGRACHKCGK 126
Query: 65 QGHVAKDCTVKSS--IICYNCNSSGHFARNCPNDS----SKRCYACHQAGHMAKECP 115
+GH++++C C+ C GH +++CP S+ C+ C + GHM++ECP
Sbjct: 127 EGHMSRECPDGGGGGRACFKCKQEGHMSKDCPQGGGGGGSRTCHKCGKEGHMSRECP 183
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 80 CYNCNSSGHFARNCPNDSSK--RCYACHQAGHMAKECPGQTAGKSPEPVV 127
C C SGHFA++CP+ + C C ++GH AK+C P+ V
Sbjct: 278 CRICKQSGHFAKDCPDKKPRDDTCRRCGESGHFAKDCEAPQDPNKPQAVT 327
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 12/57 (21%)
Query: 97 SSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
S KR C C Q+GH AK+CP + +P D TC CG GH + DC+ Q
Sbjct: 271 SEKRDDGCRICKQSGHFAKDCPDK------KPRDD---TCRRCGESGHFAKDCEAPQ 318
>gi|74835178|dbj|BAE44472.1| Vasa [Botryllus primigenus]
Length = 687
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 14/122 (11%)
Query: 39 CYKCNNYGHFAREC-----ATESVTCYNCSGQGHVAKDCTVKSSII----CYNCNSSGHF 89
CYKC GH +R+C ++ C+ C +GH+++DC C+ C GH
Sbjct: 54 CYKCGEEGHMSRDCPNGGGSSRPKGCFKCGEEGHMSRDCPNGGGDSRPKGCFKCGEEGHM 113
Query: 90 ARNCPN---DSS-KRCYACHQAGHMAKECP-GQTAGKSPEPVVDMSLTCYVCGHQGHLSY 144
+R+CPN DS K C+ C + GHM+++CP G G + C+ CG +GH S
Sbjct: 114 SRDCPNGGGDSRPKGCFKCGEEGHMSRDCPNGGEGGSRSQGDRQKGSGCFKCGEEGHFSR 173
Query: 145 DC 146
+C
Sbjct: 174 EC 175
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 58/129 (44%), Gaps = 28/129 (21%)
Query: 9 CYNCFDFGHYQYSCPQKS-SADARGDKVGIVCYKCNNYGHFARECA-----TESVTCYNC 62
CY C + GH CP S+ +G C+KC GH +R+C + C+ C
Sbjct: 54 CYKCGEEGHMSRDCPNGGGSSRPKG------CFKCGEEGHMSRDCPNGGGDSRPKGCFKC 107
Query: 63 SGQGHVAKDCTVKSSII----CYNCNSSGHFARNCPN----------DSSKR--CYACHQ 106
+GH+++DC C+ C GH +R+CPN D K C+ C +
Sbjct: 108 GEEGHMSRDCPNGGGDSRPKGCFKCGEEGHMSRDCPNGGEGGSRSQGDRQKGSGCFKCGE 167
Query: 107 AGHMAKECP 115
GH ++ECP
Sbjct: 168 EGHFSRECP 176
>gi|67904212|ref|XP_682362.1| hypothetical protein AN9093.2 [Aspergillus nidulans FGSC A4]
gi|40742736|gb|EAA61926.1| hypothetical protein AN9093.2 [Aspergillus nidulans FGSC A4]
Length = 213
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 25/116 (21%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKV------------------GIVCYKCNNYGHFA 49
+CYNC GH +CP +S RG CYKC HFA
Sbjct: 56 RCYNCSQPGHLARNCPAPASGAPRGTGAPRGGFGGGFRGGYGGYPRAATCYKCGGPNHFA 115
Query: 50 RECATESVTCYNCSGQGHVAKDCTVK-------SSIICYNCNSSGHFARNCPNDSS 98
R+C +++ CY C GH+++DCT + +CY C+ +GH +R+CPN+ +
Sbjct: 116 RDCQAQAMKCYACGKLGHISRDCTAPNGGPLSSAGKVCYKCSQAGHISRDCPNNEA 171
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 68/174 (39%), Gaps = 43/174 (24%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT-----C 59
S CY C + GHY P S+ + + GH +C T + C
Sbjct: 4 SRRACYKCGNIGHYAGKQPGHESSSCPRPRT------TESLGHVQADCPTLRLNGANGRC 57
Query: 60 YNCSGQGHVAKDCTVKSS---------------------------IICYNCNSSGHFARN 92
YNCS GH+A++C +S CY C HFAR+
Sbjct: 58 YNCSQPGHLARNCPAPASGAPRGTGAPRGGFGGGFRGGYGGYPRAATCYKCGGPNHFARD 117
Query: 93 CPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C + +CYAC + GH++++C G P+ CY C GH+S DC
Sbjct: 118 C-QAQAMKCYACGKLGHISRDCTAPNGG----PLSSAGKVCYKCSQAGHISRDC 166
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 51/131 (38%), Gaps = 39/131 (29%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP--- 94
CYKC N GH+A + GH + C + S GH +CP
Sbjct: 7 ACYKCGNIGHYAGK------------QPGHESSSCPRPRTT-----ESLGHVQADCPTLR 49
Query: 95 -NDSSKRCYACHQAGHMAKECPGQTAGKSPEPV-----------------VDMSLTCYVC 136
N ++ RCY C Q GH+A+ CP +G +P + TCY C
Sbjct: 50 LNGANGRCYNCSQPGHLARNCPAPASG-APRGTGAPRGGFGGGFRGGYGGYPRAATCYKC 108
Query: 137 GHQGHLSYDCK 147
G H + DC+
Sbjct: 109 GGPNHFARDCQ 119
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT 58
++CY C GH C + G VCYKC+ GH +R+C T
Sbjct: 123 MKCYACGKLGHISRDCTAPNGGPL--SSAGKVCYKCSQAGHISRDCPNNEAT 172
>gi|223056241|gb|ACM80366.1| vasa [Patiria miniata]
Length = 730
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 54/119 (45%), Gaps = 21/119 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGH 67
+CYNC + GH CP S RG G CYKC+ GHFAR+C
Sbjct: 112 KCYNCQEEGHMSRDCPNPKSGGGRGGGGGGECYKCHETGHFARDCPNAE----------- 160
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPNDSS---------KRCYACHQAGHMAKECPGQ 117
++ CYNC GH +R+CPN S C+ CHQ GH A+ECP +
Sbjct: 161 -SRGGGGGGGNKCYNCQEEGHMSRDCPNPKSGGGRGGGGGGECFKCHQTGHFARECPNE 218
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 19/105 (18%)
Query: 59 CYNCSGQGHVAKDCTVKSSII---------CYNCNSSGHFARNCPNDSSK--------RC 101
CYNC +GH+++DC S CY C+ +GHFAR+CPN S+ +C
Sbjct: 113 CYNCQEEGHMSRDCPNPKSGGGRGGGGGGECYKCHETGHFARDCPNAESRGGGGGGGNKC 172
Query: 102 YACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
Y C + GHM+++CP +G C+ C GH + +C
Sbjct: 173 YNCQEEGHMSRDCPNPKSGGG--RGGGGGGECFKCHQTGHFAREC 215
>gi|346320729|gb|EGX90329.1| zinc knuckle domain containing protein [Cordyceps militaris CM01]
Length = 296
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 70/170 (41%), Gaps = 45/170 (26%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-------- 54
+T QCY+C GH Q CP + G+ CY C GH AR C
Sbjct: 47 TTEAKQCYHCQGLGHVQADCP---TLRLTGNATSGRCYNCGQPGHLARACPNPVGPAAMG 103
Query: 55 -------------------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHF 89
TCY C G H A+DC ++ + CY C GH
Sbjct: 104 RGAPMGRGGYAGGNFGGRGGFAGGPRPATCYKCGGPNHFARDCQAQA-MKCYACGKLGHI 162
Query: 90 ARNCP-------NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLT 132
+R+C N + K CY C +AGH++++CP Q A +PE ++ LT
Sbjct: 163 SRDCTAPNGGPLNTAGKTCYQCGEAGHISRDCP-QKAAVAPEINNEVDLT 211
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 60/140 (42%), Gaps = 30/140 (21%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + + CY+C GH +CP
Sbjct: 8 ACYKCGNVGHYAEVCSSSERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQADCP 67
Query: 95 ------NDSSKRCYACHQAGHMAKECP---GQTAGKSPEPV------------------V 127
N +S RCY C Q GH+A+ CP G A P+
Sbjct: 68 TLRLTGNATSGRCYNCGQPGHLARACPNPVGPAAMGRGAPMGRGGYAGGNFGGRGGFAGG 127
Query: 128 DMSLTCYVCGHQGHLSYDCK 147
TCY CG H + DC+
Sbjct: 128 PRPATCYKCGGPNHFARDCQ 147
>gi|157876790|ref|XP_001686737.1| putative poly-zinc finger protein 2 [Leishmania major strain
Friedlin]
gi|68129812|emb|CAJ09118.1| putative poly-zinc finger protein 2 [Leishmania major strain
Friedlin]
Length = 135
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 62/133 (46%), Gaps = 24/133 (18%)
Query: 37 IVCYKCNNYGHFAREC--ATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFAR 91
+VCY+C GH +REC A +S C+ C GHVA++C C+ C GH AR
Sbjct: 1 MVCYRCGGVGHQSRECTSAADSAPCFRCGKPGHVARECVSTITAEEAPCFYCQKPGHRAR 60
Query: 92 NCPNDSSKR----CYACHQAGHMAKECP--------------GQTAGKSPEPVVDMSLTC 133
CP K CY C Q GH+A EC G++ +P+ V TC
Sbjct: 61 ECPEAPPKSETVICYNCSQKGHIASECTNPAHCYLCNEDGHIGRSCPTAPKRSV-ADKTC 119
Query: 134 YVCGHQGHLSYDC 146
CG +GHL DC
Sbjct: 120 RKCGRKGHLRKDC 132
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 18/125 (14%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-----TE 55
S+ + C+ C GH C +A+ C+ C GH AREC +E
Sbjct: 17 TSAADSAPCFRCGKPGHVARECVSTITAEE------APCFYCQKPGHRARECPEAPPKSE 70
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND-----SSKRCYACHQAGHM 110
+V CYNCS +GH+A +CT + CY CN GH R+CP + K C C + GH+
Sbjct: 71 TVICYNCSQKGHIASECT--NPAHCYLCNEDGHIGRSCPTAPKRSVADKTCRKCGRKGHL 128
Query: 111 AKECP 115
K+CP
Sbjct: 129 RKDCP 133
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+ C GH CP+ A ++CY C+ GH A EC T CY C+ GH+
Sbjct: 49 CFYCQKPGHRARECPE-----APPKSETVICYNCSQKGHIASEC-TNPAHCYLCNEDGHI 102
Query: 69 AKDCTV--KSSI---ICYNCNSSGHFARNCPN 95
+ C K S+ C C GH ++CP+
Sbjct: 103 GRSCPTAPKRSVADKTCRKCGRKGHLRKDCPD 134
>gi|21537255|gb|AAM61596.1| DNA-binding protein [Arabidopsis thaliana]
Length = 254
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 75/170 (44%), Gaps = 42/170 (24%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC------ATESV 57
T+ +C+NC + GH +C + +C+ C GH AR+C A +
Sbjct: 87 TAESRCWNCREPGHVASNCSNEG-----------ICHSCGKSGHRARDCSNSDSRAGDLR 135
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP-- 115
C NC QGH+A DCT + C NC +SGH AR+C ND C C +GH+A+ CP
Sbjct: 136 LCNNCFKQGHLAADCT--NDKACKNCRTSGHIARDCRNDPV--CNICSISGHVARHCPKG 191
Query: 116 -------------------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G + V + C+ CG +GH +Y+C
Sbjct: 192 DSNYSDRGSRVRDGGMQRGGLSRMSRDREGVSAMIICHNCGGRGHRAYEC 241
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 11/111 (9%)
Query: 36 GIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
G +C C GHFAR+C+ SV C NC GH+A +CT +S C+NC GH A NC N
Sbjct: 51 GNLCNNCKRPGHFARDCSNVSV-CNNCGLPGHIAAECTAESR--CWNCREPGHVASNCSN 107
Query: 96 DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ C++C ++GH A++C S D+ L C C QGHL+ DC
Sbjct: 108 EGI--CHSCGKSGHRARDCS-----NSDSRAGDLRL-CNNCFKQGHLAADC 150
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 64/144 (44%), Gaps = 32/144 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NC GH+ C S VC C GH A EC ES C+NC GHV
Sbjct: 54 CNNCKRPGHFARDCSNVS-----------VCNNCGLPGHIAAECTAES-RCWNCREPGHV 101
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS-----KRCYACHQAGHMAKECPGQTAGKSP 123
A +C+ + IC++C SGH AR+C N S + C C + GH+A +C A
Sbjct: 102 ASNCSNEG--ICHSCGKSGHRARDCSNSDSRAGDLRLCNNCFKQGHLAADCTNDKA---- 155
Query: 124 EPVVDMSLTCYVCGHQGHLSYDCK 147
C C GH++ DC+
Sbjct: 156 ---------CKNCRTSGHIARDCR 170
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 43/118 (36%), Gaps = 44/118 (37%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NCF GH +AD DK C C GH AR+C + V C CS GHV
Sbjct: 137 CNNCFKQGHL--------AADCTNDKA---CKNCRTSGHIARDCRNDPV-CNICSISGHV 184
Query: 69 AKDCT--------------------------------VKSSIICYNCNSSGHFARNCP 94
A+ C V + IIC+NC GH A CP
Sbjct: 185 ARHCPKGDSNYSDRGSRVRDGGMQRGGLSRMSRDREGVSAMIICHNCGGRGHRAYECP 242
>gi|18410883|ref|NP_565112.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
gi|145327705|ref|NP_001077828.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
gi|26451654|dbj|BAC42924.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|28973609|gb|AAO64129.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|51968528|dbj|BAD42956.1| DNA-binding protein [Arabidopsis thaliana]
gi|51968680|dbj|BAD43032.1| DNA-binding protein [Arabidopsis thaliana]
gi|51968750|dbj|BAD43067.1| DNA-binding protein [Arabidopsis thaliana]
gi|51969824|dbj|BAD43604.1| DNA-binding protein [Arabidopsis thaliana]
gi|51970558|dbj|BAD43971.1| DNA-binding protein [Arabidopsis thaliana]
gi|51971174|dbj|BAD44279.1| DNA-binding protein [Arabidopsis thaliana]
gi|51971429|dbj|BAD44379.1| DNA-binding protein [Arabidopsis thaliana]
gi|51971449|dbj|BAD44389.1| DNA-binding protein [Arabidopsis thaliana]
gi|332197612|gb|AEE35733.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
gi|332197613|gb|AEE35734.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
Length = 257
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 75/170 (44%), Gaps = 42/170 (24%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC------ATESV 57
T+ +C+NC + GH +C + +C+ C GH AR+C A +
Sbjct: 90 TAESRCWNCREPGHVASNCSNEG-----------ICHSCGKSGHRARDCSNSDSRAGDLR 138
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP-- 115
C NC QGH+A DCT + C NC +SGH AR+C ND C C +GH+A+ CP
Sbjct: 139 LCNNCFKQGHLAADCT--NDKACKNCRTSGHIARDCRNDPV--CNICSISGHVARHCPKG 194
Query: 116 -------------------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G + V + C+ CG +GH +Y+C
Sbjct: 195 DSNYSDRGSRVRDGGMQRGGLSRMSRDREGVSAMIICHNCGGRGHRAYEC 244
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 11/111 (9%)
Query: 36 GIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
G +C C GHFAR+C+ SV C NC GH+A +CT +S C+NC GH A NC N
Sbjct: 54 GNLCNNCKRPGHFARDCSNVSV-CNNCGLPGHIAAECTAESR--CWNCREPGHVASNCSN 110
Query: 96 DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ C++C ++GH A++C S D+ L C C QGHL+ DC
Sbjct: 111 EGI--CHSCGKSGHRARDCS-----NSDSRAGDLRL-CNNCFKQGHLAADC 153
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 64/144 (44%), Gaps = 32/144 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NC GH+ C S VC C GH A EC ES C+NC GHV
Sbjct: 57 CNNCKRPGHFARDCSNVS-----------VCNNCGLPGHIAAECTAES-RCWNCREPGHV 104
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS-----KRCYACHQAGHMAKECPGQTAGKSP 123
A +C+ + IC++C SGH AR+C N S + C C + GH+A +C A
Sbjct: 105 ASNCSNEG--ICHSCGKSGHRARDCSNSDSRAGDLRLCNNCFKQGHLAADCTNDKA---- 158
Query: 124 EPVVDMSLTCYVCGHQGHLSYDCK 147
C C GH++ DC+
Sbjct: 159 ---------CKNCRTSGHIARDCR 173
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 43/118 (36%), Gaps = 44/118 (37%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NCF GH +AD DK C C GH AR+C + V C CS GHV
Sbjct: 140 CNNCFKQGHL--------AADCTNDKA---CKNCRTSGHIARDCRNDPV-CNICSISGHV 187
Query: 69 AKDCT--------------------------------VKSSIICYNCNSSGHFARNCP 94
A+ C V + IIC+NC GH A CP
Sbjct: 188 ARHCPKGDSNYSDRGSRVRDGGMQRGGLSRMSRDREGVSAMIICHNCGGRGHRAYECP 245
>gi|320168085|gb|EFW44984.1| hypothetical protein CAOG_02990 [Capsaspora owczarzaki ATCC 30864]
Length = 510
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 61/133 (45%), Gaps = 30/133 (22%)
Query: 39 CYKCNNYGHFARECATES--------VTCYNCSGQGHVAKDCTVK-SSIICYNCNSSGHF 89
CYKC +GH C + S V C+ C G+GHV C S +CY C GHF
Sbjct: 154 CYKCGGFGHIQDFCPSPSGSIDMEGAVECHLCKGKGHVKMRCPNSVPSNVCYLCQMPGHF 213
Query: 90 ARNCPN-------------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSL-TCYV 135
AR CP S+ CY C Q GH++ CP G + SL +CY
Sbjct: 214 ARECPRGRDPYGLNRAPFGGDSRLCYRCQQPGHLSANCPRVARG-------EQSLSSCYK 266
Query: 136 CGHQGHLSYDCKL 148
CG +GH++ DC +
Sbjct: 267 CGQEGHIAKDCNV 279
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 62/159 (38%), Gaps = 40/159 (25%)
Query: 9 CYNCFDFGHYQYSCPQKS-SADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQ 65
CY C FGH Q CP S S D G + C+ C GH C + S CY C
Sbjct: 154 CYKCGGFGHIQDFCPSPSGSIDMEG---AVECHLCKGKGHVKMRCPNSVPSNVCYLCQMP 210
Query: 66 GHVAKDCTVK-------------SSIICYNCNSSGHFARNCP-----NDSSKRCYACHQA 107
GH A++C S +CY C GH + NCP S CY C Q
Sbjct: 211 GHFARECPRGRDPYGLNRAPFGGDSRLCYRCQQPGHLSANCPRVARGEQSLSSCYKCGQE 270
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GH+AK+C CY C GH++ C
Sbjct: 271 GHIAKDC----------------NVCYHCKKTGHVAASC 293
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 57/134 (42%), Gaps = 32/134 (23%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT----------- 54
++C+ C GH + CP ++ VCY C GHFAREC
Sbjct: 179 AVECHLCKGKGHVKMRCPNSVPSN--------VCYLCQMPGHFARECPRGRDPYGLNRAP 230
Query: 55 ---ESVTCYNCSGQGHVAKDCTV-----KSSIICYNCNSSGHFARNCPNDSSKRCYACHQ 106
+S CY C GH++ +C +S CY C GH A++C CY C +
Sbjct: 231 FGGDSRLCYRCQQPGHLSANCPRVARGEQSLSSCYKCGQEGHIAKDC-----NVCYHCKK 285
Query: 107 AGHMAKECPGQTAG 120
GH+A CP + G
Sbjct: 286 TGHVAASCPDRPPG 299
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 45/106 (42%), Gaps = 16/106 (15%)
Query: 59 CYNCSGQGHVAKDCTVKSSII-------CYNCNSSGHFARNCPND-SSKRCYACHQAGHM 110
CY C G GH+ C S I C+ C GH CPN S CY C GH
Sbjct: 154 CYKCGGFGHIQDFCPSPSGSIDMEGAVECHLCKGKGHVKMRCPNSVPSNVCYLCQMPGHF 213
Query: 111 AKECPGQTAGKSP-----EPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
A+ECP G+ P P S CY C GHLS +C V +
Sbjct: 214 ARECP---RGRDPYGLNRAPFGGDSRLCYRCQQPGHLSANCPRVAR 256
>gi|71416079|ref|XP_810083.1| poly-zinc finger protein 2 [Trypanosoma cruzi strain CL Brener]
gi|70874564|gb|EAN88232.1| poly-zinc finger protein 2, putative [Trypanosoma cruzi]
Length = 192
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 71/150 (47%), Gaps = 24/150 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-----TCYNCS 63
C+ C GH +CP + +AR CY+C GH +R+C + +C++C
Sbjct: 49 CFFCQQAGHRANNCPL-APPEARQP-----CYRCGEEGHISRDCTNPRLPRSEQSCFHCH 102
Query: 64 GQGHVAKDCT-VKSSIICYNCNSSGHFARNCPNDSSK-----RCYACHQAGHMAKECPGQ 117
GH A++C V ++ C +C +GH AR CP C+ C GH+A+ CP
Sbjct: 103 KTGHYARECPEVIENLKCNSCGVTGHIARRCPERIRTARAFYPCFRCGMQGHVARNCPNT 162
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ CYVCG +GHL+ DCK
Sbjct: 163 RLPYEEQ-------LCYVCGEKGHLARDCK 185
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 22/130 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQG 66
CY C + GH C + R + C+ C+ GH+AREC E++ C +C G
Sbjct: 73 CYRCGEEGHISRDC-----TNPRLPRSEQSCFHCHKTGHYARECPEVIENLKCNSCGVTG 127
Query: 67 HVAKDC-----TVKSSIICYNCNSSGHFARNCPND----SSKRCYACHQAGHMAKECPGQ 117
H+A+ C T ++ C+ C GH ARNCPN + CY C + GH+A++C
Sbjct: 128 HIARRCPERIRTARAFYPCFRCGMQGHVARNCPNTRLPYEEQLCYVCGEKGHLARDC--- 184
Query: 118 TAGKSPEPVV 127
KS P+V
Sbjct: 185 ---KSEAPLV 191
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 64/159 (40%), Gaps = 49/159 (30%)
Query: 37 IVCYKCNNYGHFARECA--TESVTCYNCSGQGHVAKDCTVKSSI---------------- 78
+VCY+C GH +R+C+ C+ C GH++KDC +
Sbjct: 1 MVCYRCGGVGHTSRDCSRPVNESLCFRCGKPGHMSKDCASDIDVKNAPCFFCQQAGHRAN 60
Query: 79 -----------ICYNCNSSGHFARNCPNDSSKR----CYACHQAGHMAKECP-------- 115
CY C GH +R+C N R C+ CH+ GH A+ECP
Sbjct: 61 NCPLAPPEARQPCYRCGEEGHISRDCTNPRLPRSEQSCFHCHKTGHYARECPEVIENLKC 120
Query: 116 ------GQTAGKSPEPVVDMSL--TCYVCGHQGHLSYDC 146
G A + PE + C+ CG QGH++ +C
Sbjct: 121 NSCGVTGHIARRCPERIRTARAFYPCFRCGMQGHVARNC 159
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-----ESVT 58
++C +C GH CP++ R + C++C GH AR C E
Sbjct: 115 IENLKCNSCGVTGHIARRCPER----IRTARAFYPCFRCGMQGHVARNCPNTRLPYEEQL 170
Query: 59 CYNCSGQGHVAKDCTVKSSII 79
CY C +GH+A+DC ++ ++
Sbjct: 171 CYVCGEKGHLARDCKSEAPLV 191
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 78 IICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVC 136
++CY C GH +R+C ++ C+ C + GHM+K+C K+ C+ C
Sbjct: 1 MVCYRCGGVGHTSRDCSRPVNESLCFRCGKPGHMSKDCASDIDVKN--------APCFFC 52
Query: 137 GHQGHLSYDCKLV 149
GH + +C L
Sbjct: 53 QQAGHRANNCPLA 65
>gi|326488841|dbj|BAJ98032.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326492013|dbj|BAJ98231.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 292
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 59/118 (50%), Gaps = 21/118 (17%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------ESV 57
+S C+NC + GH +CP + +C C GH A++C E
Sbjct: 76 SSKDLCWNCKEPGHMANACPNEG-----------ICRNCGKSGHIAKDCTAPPMLPGEVK 124
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
C NC GH+A +CT + + C NC SGH ARNC ND C CH AGH+A++CP
Sbjct: 125 LCNNCYKPGHIAVECTNEKA--CNNCRKSGHLARNCTNDPV--CNLCHVAGHLARQCP 178
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 19/124 (15%)
Query: 23 PQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYN 82
P +S++D +C C GHFAR+C SV C+ C GH+A +C+ K +C+N
Sbjct: 35 PSRSASD--------LCNNCKRPGHFARDCPNVSV-CHACGLPGHIAAECSSKD--LCWN 83
Query: 83 CNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHL 142
C GH A CPN+ C C ++GH+AK+C +P + C C GH+
Sbjct: 84 CKEPGHMANACPNEGI--CRNCGKSGHIAKDC------TAPPMLPGEVKLCNNCYKPGHI 135
Query: 143 SYDC 146
+ +C
Sbjct: 136 AVEC 139
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 70/151 (46%), Gaps = 34/151 (22%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYN 61
S +++ C NC GH+ CP S VC+ C GH A EC+++ + C+N
Sbjct: 36 SRSASDLCNNCKRPGHFARDCPNVS-----------VCHACGLPGHIAAECSSKDL-CWN 83
Query: 62 CSGQGHVAKDCTVKSSIICYNCNSSGHFARNC------PNDSSKRCYACHQAGHMAKECP 115
C GH+A C + IC NC SGH A++C P + K C C++ GH+A EC
Sbjct: 84 CKEPGHMANACPNEG--ICRNCGKSGHIAKDCTAPPMLPGEV-KLCNNCYKPGHIAVECT 140
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ A C C GHL+ +C
Sbjct: 141 NEKA-------------CNNCRKSGHLARNC 158
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 37 IVCYKCNNYGHFARECATES-VTCYNCSGQGHVAKDCT 73
+VC CN GH +R+C + + C NC G+GH+A +C
Sbjct: 242 MVCRACNQVGHMSRDCMGGAFMICNNCGGRGHMAYECP 279
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
+ C C+ GH+++DC + +IC NC GH A CP
Sbjct: 242 MVCRACNQVGHMSRDCMGGAFMICNNCGGRGHMAYECP 279
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
S ++C CN GH +R+C + C C GHMA ECP
Sbjct: 240 SDMVCRACNQVGHMSRDCMGGAFMICNNCGGRGHMAYECP 279
>gi|326480350|gb|EGE04360.1| zinc knuckle transcription factor [Trichophyton equinum CBS 127.97]
Length = 473
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 65/146 (44%), Gaps = 18/146 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC GH SC ++ S R V + C C GH AR+C V C NC
Sbjct: 267 KCSNCGKMGHIMKSCKEELSVVER---VEVKCVNCKQPGHRARDCKEARVDRFACRNCGK 323
Query: 65 QGHVAKDCTVKSS---IICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAG 120
GH + D T S + C CN GHFA++CP R C C H+A++C
Sbjct: 324 GGHRSNDRTEPRSAEGVECKRCNEVGHFAKDCPQGGGSRACRNCGSEDHIARDC------ 377
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDC 146
+P ++TC C GH S DC
Sbjct: 378 --DQPRNMANVTCRNCEEMGHFSRDC 401
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE--SVTC 59
+ C NC GH + SA+ G+ C +CN GHFA++C S C
Sbjct: 311 ARVDRFACRNCGKGGHRSNDRTEPRSAE------GVECKRCNEVGHFAKDCPQGGGSRAC 364
Query: 60 YNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNC--PNDSSK-RCYACHQAGHMAKE 113
NC + H+A+DC +++ C NC GHF+R+C D SK +C C + GH +
Sbjct: 365 RNCGSEDHIARDCDQPRNMANVTCRNCEEMGHFSRDCTKKKDWSKVKCSCCGEMGHTIRR 424
Query: 114 CPGQTA 119
CP A
Sbjct: 425 CPQAPA 430
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Query: 36 GIVCYKCNNYGHFARECATE---SVTCYNCSGQGHVAKDCTVKSSII--CYNCNSSGHFA 90
G C C GHFAREC S C+NC +GH DC C C GH A
Sbjct: 50 GDTCRNCGQAGHFARECPEPRKPSGACFNCGQEGHNKSDCPNPRVFTGTCRVCEKEGHPA 109
Query: 91 RNCPNDSSKRCYACHQAGHMAKEC 114
CP+ C C GH EC
Sbjct: 110 AECPDRPPDICKNCKGEGHKTMEC 133
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 58 TCYNCSGQGHVAKDCTV--KSSIICYNCNSSGHFARNCPNDS--SKRCYACHQAGHMAKE 113
TC NC GH A++C K S C+NC GH +CPN + C C + GH A E
Sbjct: 52 TCRNCGQAGHFARECPEPRKPSGACFNCGQEGHNKSDCPNPRVFTGTCRVCEKEGHPAAE 111
Query: 114 CPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
CP + P+ C C +GH + +C +K
Sbjct: 112 CP----DRPPD-------ICKNCKGEGHKTMECTENRK 138
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 35/88 (39%), Gaps = 10/88 (11%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSGQ 65
C NC GH+ CP+ K C+ C GH +C V TC C +
Sbjct: 53 CRNCGQAGHFARECPEPR-------KPSGACFNCGQEGHNKSDCPNPRVFTGTCRVCEKE 105
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNC 93
GH A +C + IC NC GH C
Sbjct: 106 GHPAAECPDRPPDICKNCKGEGHKTMEC 133
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 8/75 (10%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-TCYNCSGQGH 67
C+NC GH + CP C C GH A EC C NC G+GH
Sbjct: 76 CFNCGQEGHNKSDCPNPRVFTG-------TCRVCEKEGHPAAECPDRPPDICKNCKGEGH 128
Query: 68 VAKDCTVKSSIICYN 82
+CT + +N
Sbjct: 129 KTMECTENRKLEQHN 143
>gi|327294357|ref|XP_003231874.1| zinc knuckle transcription factor [Trichophyton rubrum CBS 118892]
gi|326465819|gb|EGD91272.1| zinc knuckle transcription factor [Trichophyton rubrum CBS 118892]
Length = 471
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 65/146 (44%), Gaps = 18/146 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC GH SC ++ S R V + C C GH AR+C V C NC
Sbjct: 267 KCSNCGKMGHIMKSCKEELSVVER---VEVKCVNCKQPGHRARDCKEARVDRFACRNCGY 323
Query: 65 QGHVAKDCTVKSS---IICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAG 120
GH + +CT S + C CN GHFA +CP R C C H+A++C
Sbjct: 324 GGHRSNECTEPRSAEGVECKRCNEVGHFANDCPQGGGSRACRNCGSEDHIARDC------ 377
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDC 146
+P ++TC C GH S DC
Sbjct: 378 --DQPRNMATVTCRNCEEMGHFSRDC 401
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE--SVTC 59
+ C NC GH C + SA+ G+ C +CN GHFA +C S C
Sbjct: 311 ARVDRFACRNCGYGGHRSNECTEPRSAE------GVECKRCNEVGHFANDCPQGGGSRAC 364
Query: 60 YNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNC--PNDSSK-RCYACHQAGHMAKE 113
NC + H+A+DC +++ C NC GHF+R+C D SK +C C + GH +
Sbjct: 365 RNCGSEDHIARDCDQPRNMATVTCRNCEEMGHFSRDCTKKKDWSKVKCSCCGEMGHTIRR 424
Query: 114 CP 115
CP
Sbjct: 425 CP 426
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Query: 36 GIVCYKCNNYGHFARECATE---SVTCYNCSGQGHVAKDCTVKSSII--CYNCNSSGHFA 90
G C C GHFAREC S C+NC +GH DC C C GH A
Sbjct: 50 GDTCRNCGQAGHFARECPEPRKPSGACFNCGQEGHNKSDCPNPRVFTGTCRICEKEGHPA 109
Query: 91 RNCPNDSSKRCYACHQAGHMAKEC 114
CP+ C C GH EC
Sbjct: 110 AECPDRPPDICKNCKGEGHKTMEC 133
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 58 TCYNCSGQGHVAKDCTV--KSSIICYNCNSSGHFARNCPNDS--SKRCYACHQAGHMAKE 113
TC NC GH A++C K S C+NC GH +CPN + C C + GH A E
Sbjct: 52 TCRNCGQAGHFARECPEPRKPSGACFNCGQEGHNKSDCPNPRVFTGTCRICEKEGHPAAE 111
Query: 114 CPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
CP + P+ C C +GH + +C +K
Sbjct: 112 CP----DRPPD-------ICKNCKGEGHKTMECTENRK 138
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 35/88 (39%), Gaps = 10/88 (11%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSGQ 65
C NC GH+ CP+ K C+ C GH +C V TC C +
Sbjct: 53 CRNCGQAGHFARECPEPR-------KPSGACFNCGQEGHNKSDCPNPRVFTGTCRICEKE 105
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNC 93
GH A +C + IC NC GH C
Sbjct: 106 GHPAAECPDRPPDICKNCKGEGHKTMEC 133
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 8/75 (10%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-TCYNCSGQGH 67
C+NC GH + CP C C GH A EC C NC G+GH
Sbjct: 76 CFNCGQEGHNKSDCPNPRVFTG-------TCRICEKEGHPAAECPDRPPDICKNCKGEGH 128
Query: 68 VAKDCTVKSSIICYN 82
+CT + +N
Sbjct: 129 KTMECTENRKLEQHN 143
>gi|326475301|gb|EGD99310.1| Zinc knuckle transcription factor (CnjB) [Trichophyton tonsurans
CBS 112818]
Length = 494
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 65/146 (44%), Gaps = 18/146 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC GH SC ++ S R V + C C GH AR+C V C NC
Sbjct: 288 KCSNCGKMGHIMKSCKEELSVVER---VEVKCVNCKQPGHRARDCKEARVDRFACRNCGK 344
Query: 65 QGHVAKDCTVKSS---IICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAG 120
GH + D T S + C CN GHFA++CP R C C H+A++C
Sbjct: 345 GGHRSNDRTEPRSAEGVECKRCNEVGHFAKDCPQGGGSRACRNCGSEDHIARDC------ 398
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDC 146
+P ++TC C GH S DC
Sbjct: 399 --DQPRNMANVTCRNCEEMGHFSRDC 422
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE--SVTC 59
+ C NC GH + SA+ G+ C +CN GHFA++C S C
Sbjct: 332 ARVDRFACRNCGKGGHRSNDRTEPRSAE------GVECKRCNEVGHFAKDCPQGGGSRAC 385
Query: 60 YNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNC--PNDSSK-RCYACHQAGHMAKE 113
NC + H+A+DC +++ C NC GHF+R+C D SK +C C + GH +
Sbjct: 386 RNCGSEDHIARDCDQPRNMANVTCRNCEEMGHFSRDCTKKKDWSKVKCSCCGEMGHTIRR 445
Query: 114 CPGQTAGKS 122
CP A ++
Sbjct: 446 CPQAPADEN 454
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Query: 36 GIVCYKCNNYGHFARECATE---SVTCYNCSGQGHVAKDCTVKSSII--CYNCNSSGHFA 90
G C C GHFAREC S C+NC +GH DC C C GH A
Sbjct: 50 GDTCRNCGQAGHFARECPEPRKPSGACFNCGQEGHNKSDCPNPRVFTGTCRVCEKEGHPA 109
Query: 91 RNCPNDSSKRCYACHQAGHMAKEC 114
CP+ C C GH EC
Sbjct: 110 AECPDRPPDICKNCKGEGHKTMEC 133
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 58 TCYNCSGQGHVAKDCT--VKSSIICYNCNSSGHFARNCPNDS--SKRCYACHQAGHMAKE 113
TC NC GH A++C K S C+NC GH +CPN + C C + GH A E
Sbjct: 52 TCRNCGQAGHFARECPEPRKPSGACFNCGQEGHNKSDCPNPRVFTGTCRVCEKEGHPAAE 111
Query: 114 CPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
CP + P+ C C +GH + +C +K
Sbjct: 112 CP----DRPPD-------ICKNCKGEGHKTMECTENRK 138
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 35/88 (39%), Gaps = 10/88 (11%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSGQ 65
C NC GH+ CP+ K C+ C GH +C V TC C +
Sbjct: 53 CRNCGQAGHFARECPEPR-------KPSGACFNCGQEGHNKSDCPNPRVFTGTCRVCEKE 105
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNC 93
GH A +C + IC NC GH C
Sbjct: 106 GHPAAECPDRPPDICKNCKGEGHKTMEC 133
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 8/75 (10%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-TCYNCSGQGH 67
C+NC GH + CP C C GH A EC C NC G+GH
Sbjct: 76 CFNCGQEGHNKSDCPNPRVFTG-------TCRVCEKEGHPAAECPDRPPDICKNCKGEGH 128
Query: 68 VAKDCTVKSSIICYN 82
+CT + +N
Sbjct: 129 KTMECTENRKLEQHN 143
>gi|402077716|gb|EJT73065.1| zinc knuckle domain-containing protein, variant [Gaeumannomyces
graminis var. tritici R3-111a-1]
gi|402077717|gb|EJT73066.1| zinc knuckle domain-containing protein [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 206
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 62/146 (42%), Gaps = 41/146 (28%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGD-------KVGIVCYKCNNYGHFARECATESV---- 57
CY C GH CPQ G + G CYKC GH AR C+ +
Sbjct: 61 CYRCSQPGHISRDCPQSGGGGGGGGGGGGGGGQSGAECYKCGEVGHIARNCSKAAGYGGG 120
Query: 58 -------------------------TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARN 92
TCY+C G GH+++DC S CYNC +GHF+R+
Sbjct: 121 GGGGYGGGGGYSGGGGSYGGGGGGKTCYSCGGIGHMSRDCVNGSK--CYNCGETGHFSRD 178
Query: 93 CPNDSS---KRCYACHQAGHMAKECP 115
CP SS K CY C Q GH+ ECP
Sbjct: 179 CPKGSSTGEKICYKCQQPGHVQAECP 204
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 57/145 (39%), Gaps = 36/145 (24%)
Query: 38 VCYKCNNYGHFARECATE-SVTCYNCSGQGHVAKDCTV--KSSIICYNCNSSGHFARNCP 94
CY C H AR+C + CYNC G+GH+++DC K ICY C+ GH +R+CP
Sbjct: 16 ACYTCGQPNHQARDCPNRGAAKCYNCGGEGHISRDCPEGQKEQKICYRCSQPGHISRDCP 75
Query: 95 N----------------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSL------- 131
S CY C + GH+A+ C
Sbjct: 76 QSGGGGGGGGGGGGGGGQSGAECYKCGEVGHIARNCSKAAGYGGGGGGGYGGGGGYSGGG 135
Query: 132 ----------TCYVCGHQGHLSYDC 146
TCY CG GH+S DC
Sbjct: 136 GSYGGGGGGKTCYSCGGIGHMSRDC 160
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 72/187 (38%), Gaps = 64/187 (34%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA------------ 53
+CYNC GH CP+ G K +CY+C+ GH +R+C
Sbjct: 35 AAKCYNCGGEGHISRDCPE-------GQKEQKICYRCSQPGHISRDCPQSGGGGGGGGGG 87
Query: 54 -----TESVTCYNCSGQGHVAKDCTVKSSI----------------------------IC 80
CY C GH+A++C+ + C
Sbjct: 88 GGGGGQSGAECYKCGEVGHIARNCSKAAGYGGGGGGGYGGGGGYSGGGGSYGGGGGGKTC 147
Query: 81 YNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP-GQTAGKSPEPVVDMSLTCYVCGHQ 139
Y+C GH +R+C N S +CY C + GH +++CP G + G+ CY C
Sbjct: 148 YSCGGIGHMSRDCVNGS--KCYNCGETGHFSRDCPKGSSTGEK---------ICYKCQQP 196
Query: 140 GHLSYDC 146
GH+ +C
Sbjct: 197 GHVQAEC 203
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 11/53 (20%)
Query: 99 KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
+ CY C Q H A++CP + A K CY CG +GH+S DC QK
Sbjct: 15 RACYTCGQPNHQARDCPNRGAAK-----------CYNCGGEGHISRDCPEGQK 56
>gi|429848776|gb|ELA24219.1| zinc knuckle domain containing protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 220
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 77/197 (39%), Gaps = 61/197 (30%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TES 56
MSS S CY C + GHY C SSA+ +CY C GH + C TE+
Sbjct: 1 MSSLSRRACYKCGNVGHYAEVC---SSAER-------LCYNCKQPGHESNGCPLPRTTEA 50
Query: 57 VTCYNCSGQGHVAKDCTV------KSSIICYNCNSSGHFARNCPNDSS------------ 98
CY+C G GHV DC +S CYNC GH AR CPN +
Sbjct: 51 KQCYHCQGLGHVQADCPTLRLSGAGTSGRCYNCGQPGHLARACPNPAGVGIGRGAPVPRG 110
Query: 99 ----------------KRCYACHQAGHMAKECPGQTA-----GK------SPE--PVVDM 129
CY C H A++C Q GK +P P+
Sbjct: 111 AFGGYGRGGFAGGPRPATCYKCGGPNHFARDCQAQAMKCYACGKLGHICTAPNGGPLNTA 170
Query: 130 SLTCYVCGHQGHLSYDC 146
TCY CG GH+S DC
Sbjct: 171 GKTCYQCGEAGHISRDC 187
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 61/136 (44%), Gaps = 26/136 (19%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + + CY+C GH +CP
Sbjct: 8 ACYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQADCP 67
Query: 95 N------DSSKRCYACHQAGHMAKECP---GQTAGK-SPEP-------------VVDMSL 131
+S RCY C Q GH+A+ CP G G+ +P P
Sbjct: 68 TLRLSGAGTSGRCYNCGQPGHLARACPNPAGVGIGRGAPVPRGAFGGYGRGGFAGGPRPA 127
Query: 132 TCYVCGHQGHLSYDCK 147
TCY CG H + DC+
Sbjct: 128 TCYKCGGPNHFARDCQ 143
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 64/161 (39%), Gaps = 37/161 (22%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES------ 56
+T QCY+C GH Q CP + G CY C GH AR C +
Sbjct: 47 TTEAKQCYHCQGLGHVQADCP---TLRLSGAGTSGRCYNCGQPGHLARACPNPAGVGIGR 103
Query: 57 -----------------------VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHF---A 90
TCY C G H A+DC ++ + CY C GH
Sbjct: 104 GAPVPRGAFGGYGRGGFAGGPRPATCYKCGGPNHFARDCQAQA-MKCYACGKLGHICTAP 162
Query: 91 RNCP-NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMS 130
P N + K CY C +AGH++++CP + A VDM+
Sbjct: 163 NGGPLNTAGKTCYQCGEAGHISRDCPQKNANGEIPNDVDMN 203
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S CY C + GH+A C + + + CY C Q GH + CP P + CY
Sbjct: 5 SRRACYKCGNVGHYAEVC-SSAERLCYNCKQPGHESNGCP--------LPRTTEAKQCYH 55
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ DC ++ S
Sbjct: 56 CQGLGHVQADCPTLRLS 72
>gi|71398909|ref|XP_802672.1| poly-zinc finger protein 2 [Trypanosoma cruzi strain CL Brener]
gi|70864476|gb|EAN81226.1| poly-zinc finger protein 2, putative [Trypanosoma cruzi]
Length = 192
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 71/150 (47%), Gaps = 24/150 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-----TCYNCS 63
C+ C GH +CP + +AR CY+C GH +R+C + +C++C
Sbjct: 49 CFFCQQAGHRANNCPL-APPEARQP-----CYRCGEEGHISRDCTNPRLPRSEQSCFHCH 102
Query: 64 GQGHVAKDCT-VKSSIICYNCNSSGHFARNCPNDSSK-----RCYACHQAGHMAKECPGQ 117
GH A++C V ++ C +C +GH AR CP C+ C GH+A+ CP
Sbjct: 103 KTGHYARECPEVIENLKCNSCGVTGHIARRCPERIRAARAFYPCFRCGMQGHVARNCPNT 162
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ CYVCG +GHL+ DCK
Sbjct: 163 R-------LPYEGQLCYVCGEKGHLARDCK 185
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 22/130 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQG 66
CY C + GH C + R + C+ C+ GH+AREC E++ C +C G
Sbjct: 73 CYRCGEEGHISRDC-----TNPRLPRSEQSCFHCHKTGHYARECPEVIENLKCNSCGVTG 127
Query: 67 HVAKDC-----TVKSSIICYNCNSSGHFARNCPND----SSKRCYACHQAGHMAKECPGQ 117
H+A+ C ++ C+ C GH ARNCPN + CY C + GH+A++C
Sbjct: 128 HIARRCPERIRAARAFYPCFRCGMQGHVARNCPNTRLPYEGQLCYVCGEKGHLARDC--- 184
Query: 118 TAGKSPEPVV 127
KS P+V
Sbjct: 185 ---KSEAPLV 191
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 64/159 (40%), Gaps = 49/159 (30%)
Query: 37 IVCYKCNNYGHFARECA--TESVTCYNCSGQGHVAKDCTVKSSI---------------- 78
+VCY+C GH +R+C+ C+ C GH++KDC +
Sbjct: 1 MVCYRCGGVGHTSRDCSRPVNESLCFRCGKPGHMSKDCASDIDVKNAPCFFCQQAGHRAN 60
Query: 79 -----------ICYNCNSSGHFARNCPNDSSKR----CYACHQAGHMAKECP-------- 115
CY C GH +R+C N R C+ CH+ GH A+ECP
Sbjct: 61 NCPLAPPEARQPCYRCGEEGHISRDCTNPRLPRSEQSCFHCHKTGHYARECPEVIENLKC 120
Query: 116 ------GQTAGKSPEPV--VDMSLTCYVCGHQGHLSYDC 146
G A + PE + C+ CG QGH++ +C
Sbjct: 121 NSCGVTGHIARRCPERIRAARAFYPCFRCGMQGHVARNC 159
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-----ESVT 58
++C +C GH CP++ R + C++C GH AR C E
Sbjct: 115 IENLKCNSCGVTGHIARRCPER----IRAARAFYPCFRCGMQGHVARNCPNTRLPYEGQL 170
Query: 59 CYNCSGQGHVAKDCTVKSSII 79
CY C +GH+A+DC ++ ++
Sbjct: 171 CYVCGEKGHLARDCKSEAPLV 191
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 78 IICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVC 136
++CY C GH +R+C ++ C+ C + GHM+K+C K+ C+ C
Sbjct: 1 MVCYRCGGVGHTSRDCSRPVNESLCFRCGKPGHMSKDCASDIDVKN--------APCFFC 52
Query: 137 GHQGHLSYDCKLV 149
GH + +C L
Sbjct: 53 QQAGHRANNCPLA 65
>gi|406864044|gb|EKD17090.1| zinc knuckle protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 223
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 72/185 (38%), Gaps = 52/185 (28%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---- 58
S++ CYNC GH CP + +A+ CY C GH +C T ++
Sbjct: 23 SSAERLCYNCKQPGHESNGCPLPRTTEAK------QCYHCQGLGHVQADCPTLRLSGAGT 76
Query: 59 ---CYNCSGQGHVAKDCTV----------------------------------KSSIICY 81
CYNC GH+A+ C CY
Sbjct: 77 SGRCYNCGLPGHLARSCPAPAGPGPIPGVGRGLGAPRGGFGGGYAPRGAFAGGPRPATCY 136
Query: 82 NCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGH 141
C HFAR+C + +CYAC + GH++++C G P+ TCY CG GH
Sbjct: 137 KCGGPNHFARDC-QAQAMKCYACGKLGHISRDCTAPNGG----PLNTAGKTCYQCGEAGH 191
Query: 142 LSYDC 146
+S DC
Sbjct: 192 ISRDC 196
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 62/159 (38%), Gaps = 46/159 (28%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC---------- 52
+T QCY+C GH Q CP + G CY C GH AR C
Sbjct: 47 TTEAKQCYHCQGLGHVQADCP---TLRLSGAGTSGRCYNCGLPGHLARSCPAPAGPGPIP 103
Query: 53 -------------------------ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSG 87
TCY C G H A+DC ++ + CY C G
Sbjct: 104 GVGRGLGAPRGGFGGGYAPRGAFAGGPRPATCYKCGGPNHFARDCQAQA-MKCYACGKLG 162
Query: 88 HFARNCP-------NDSSKRCYACHQAGHMAKECPGQTA 119
H +R+C N + K CY C +AGH++++CP + A
Sbjct: 163 HISRDCTAPNGGPLNTAGKTCYQCGEAGHISRDCPQKGA 201
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 56/147 (38%), Gaps = 42/147 (28%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + + CY+C GH +CP
Sbjct: 8 ACYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQADCP 67
Query: 95 N------DSSKRCYACHQAGHMAKEC----------------------------PGQTAG 120
+S RCY C GH+A+ C P
Sbjct: 68 TLRLSGAGTSGRCYNCGLPGHLARSCPAPAGPGPIPGVGRGLGAPRGGFGGGYAPRGAFA 127
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDCK 147
P P TCY CG H + DC+
Sbjct: 128 GGPRPA-----TCYKCGGPNHFARDCQ 149
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S CY C + GH+A C + + + CY C Q GH + CP P + CY
Sbjct: 5 SRRACYKCGNVGHYAEVC-SSAERLCYNCKQPGHESNGCP--------LPRTTEAKQCYH 55
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ DC ++ S
Sbjct: 56 CQGLGHVQADCPTLRLS 72
>gi|146104184|ref|XP_001469753.1| putative poly-zinc finger protein 2 [Leishmania infantum JPCM5]
gi|398024250|ref|XP_003865286.1| poly-zinc finger protein 2, putative [Leishmania donovani]
gi|134074123|emb|CAM72865.1| putative poly-zinc finger protein 2 [Leishmania infantum JPCM5]
gi|322503523|emb|CBZ38609.1| poly-zinc finger protein 2, putative [Leishmania donovani]
Length = 135
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 62/133 (46%), Gaps = 24/133 (18%)
Query: 37 IVCYKCNNYGHFAREC--ATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFAR 91
+VCY+C GH +REC A +S C+ C GHVAK+C C+ C GH AR
Sbjct: 1 MVCYRCGGVGHQSRECTSAADSAPCFRCGKPGHVAKECVSTITAEEAPCFYCQKPGHRAR 60
Query: 92 NCPNDSSK----RCYACHQAGHMAKECP--------------GQTAGKSPEPVVDMSLTC 133
+CP K CY C Q GH+A EC G++ +P+ TC
Sbjct: 61 DCPEAPPKSETVMCYNCSQKGHIASECTNPAHCYLCNEDGHIGRSCPTAPKRSA-ADKTC 119
Query: 134 YVCGHQGHLSYDC 146
CG +GHL DC
Sbjct: 120 RKCGKKGHLRKDC 132
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 18/124 (14%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-----TES 56
S+ + C+ C GH C +A+ C+ C GH AR+C +E+
Sbjct: 18 SAADSAPCFRCGKPGHVAKECVSTITAEE------APCFYCQKPGHRARDCPEAPPKSET 71
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP-----NDSSKRCYACHQAGHMA 111
V CYNCS +GH+A +CT + CY CN GH R+CP + + K C C + GH+
Sbjct: 72 VMCYNCSQKGHIASECT--NPAHCYLCNEDGHIGRSCPTAPKRSAADKTCRKCGKKGHLR 129
Query: 112 KECP 115
K+CP
Sbjct: 130 KDCP 133
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 11/98 (11%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
+ C+ C GH CP+ A ++CY C+ GH A EC T CY C
Sbjct: 43 TAEEAPCFYCQKPGHRARDCPE-----APPKSETVMCYNCSQKGHIASEC-TNPAHCYLC 96
Query: 63 SGQGHVAKDCTVK-----SSIICYNCNSSGHFARNCPN 95
+ GH+ + C + C C GH ++CP+
Sbjct: 97 NEDGHIGRSCPTAPKRSAADKTCRKCGKKGHLRKDCPD 134
>gi|224074255|ref|XP_002304323.1| predicted protein [Populus trichocarpa]
gi|222841755|gb|EEE79302.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 58/128 (45%), Gaps = 18/128 (14%)
Query: 36 GIVCYKCNNYGHFARECAT-----------------ESVTCYNCSGQGHVAKDCTVKSSI 78
G+ C+ C N GH AR+C CY C GH A++CT ++
Sbjct: 95 GVGCFNCGNPGHIARDCNNNSSKSYNNYNNNNNNRGADFGCYKCGSSGHFARECTKGNNN 154
Query: 79 ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGH 138
CY+C GH AR+CP S CY C GH+A++C S C+ CG+
Sbjct: 155 GCYSCGGIGHVARDCPGGSGA-CYNCGGYGHLARDCTSARVTGGGRFGGGNSGGCFNCGN 213
Query: 139 QGHLSYDC 146
+GH + DC
Sbjct: 214 EGHFARDC 221
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADA---------RGDKVGIVCYKCNNYGHFARECAT-ES 56
+ C+NC + GH C SS RG G CYKC + GHFAREC +
Sbjct: 96 VGCFNCGNPGHIARDCNNNSSKSYNNYNNNNNNRGADFG--CYKCGSSGHFARECTKGNN 153
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN-----------DSSKRCYACH 105
CY+C G GHVA+DC S CYNC GH AR+C + +S C+ C
Sbjct: 154 NGCYSCGGIGHVARDCPGGSGA-CYNCGGYGHLARDCTSARVTGGGRFGGGNSGGCFNCG 212
Query: 106 QAGHMAKECPGQT 118
GH A++CP Q+
Sbjct: 213 NEGHFARDCPEQS 225
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 51/104 (49%), Gaps = 20/104 (19%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSG 64
+ CY C GH+ C +G+ G CY C GH AR+C S CYNC G
Sbjct: 131 ADFGCYKCGSSGHFAREC-------TKGNNNG--CYSCGGIGHVARDCPGGSGACYNCGG 181
Query: 65 QGHVAKDCT-----------VKSSIICYNCNSSGHFARNCPNDS 97
GH+A+DCT +S C+NC + GHFAR+CP S
Sbjct: 182 YGHLARDCTSARVTGGGRFGGGNSGGCFNCGNEGHFARDCPEQS 225
>gi|114689169|ref|XP_529043.2| PREDICTED: zinc finger CCHC domain-containing protein 13 [Pan
troglodytes]
gi|397507945|ref|XP_003824438.1| PREDICTED: zinc finger CCHC domain-containing protein 13-like [Pan
paniscus]
Length = 170
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE-SVTCYNCSGQGH 67
CYNC GH C + + CY C GH AR+C + CY+C GH
Sbjct: 67 CYNCGRSGHIAKDCKEPKRERRQ------HCYTCGRLGHLARDCDRQKEQKCYSCGKLGH 120
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQT 118
+ KDC + + CY C GH A NC +CY C ++GH+AKECP +
Sbjct: 121 IQKDC---AQVKCYRCGEIGHVAINCSKTRPGQCYRCGKSGHLAKECPSEV 168
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Query: 35 VGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFAR 91
+ CY C G A+ CYNC GH+AKDC + CY C GH AR
Sbjct: 43 LSYTCYCCGESGRNAKNRVLLGNICYNCGRSGHIAKDCKEPKRERRQHCYTCGRLGHLAR 102
Query: 92 NCPNDSSKRCYACHQAGHMAKECPGQT---AGKSPEPVVDMSLT----CYVCGHQGHLSY 144
+C ++CY+C + GH+ K+C G+ ++ S T CY CG GHL+
Sbjct: 103 DCDRQKEQKCYSCGKLGHIQKDCAQVKCYRCGEIGHVAINCSKTRPGQCYRCGKSGHLAK 162
Query: 145 DC 146
+C
Sbjct: 163 EC 164
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 13/66 (19%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C GH Q C Q + CY+C GH A C+ T CY C G
Sbjct: 111 KCYSCGKLGHIQKDCAQ------------VKCYRCGEIGHVAINCSKTRPGQCYRCGKSG 158
Query: 67 HVAKDC 72
H+AK+C
Sbjct: 159 HLAKEC 164
>gi|344301675|gb|EGW31980.1| zinc-finger protein GIS2 [Spathaspora passalidarum NRRL Y-27907]
Length = 173
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 64/132 (48%), Gaps = 31/132 (23%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------- 57
+T QCY+C D GH Q CP ++ G CY C +GH ++ C +E V
Sbjct: 49 TTKQCYSCGDVGHVQSECPNQAQ--------GTKCYNCGQFGHISKNCDSEQVGGARKKF 100
Query: 58 ---------TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP------NDSSKRCY 102
TCY C G H A+DC + CY C +GH +++C N SK CY
Sbjct: 101 YPTKSAAGTTCYKCGGPNHFARDCQA-GVVKCYACGKTGHISKDCTSSSGGSNYGSKTCY 159
Query: 103 ACHQAGHMAKEC 114
C ++GH++KEC
Sbjct: 160 NCGKSGHISKEC 171
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCP 94
CYKC GH A C E CYNC GH + DC ++ CY+C GH CP
Sbjct: 8 TCYKCGEVGHLADNCQQEERLCYNCHKPGHESTDCPDPKQPTTKQCYSCGDVGHVQSECP 67
Query: 95 NDS-SKRCYACHQAGHMAKECPGQTAGKSPEPVVDM----SLTCYVCGHQGHLSYDCK 147
N + +CY C Q GH++K C + G + + TCY CG H + DC+
Sbjct: 68 NQAQGTKCYNCGQFGHISKNCDSEQVGGARKKFYPTKSAAGTTCYKCGGPNHFARDCQ 125
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 14/96 (14%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN---DSSKRCYACHQAGHMAKEC 114
TCY C GH+A +C + +CYNC+ GH + +CP+ ++K+CY+C GH+ EC
Sbjct: 8 TCYKCGEVGHLADNCQ-QEERLCYNCHKPGHESTDCPDPKQPTTKQCYSCGDVGHVQSEC 66
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
P Q G CY CG GH+S +C Q
Sbjct: 67 PNQAQG----------TKCYNCGQFGHISKNCDSEQ 92
>gi|70991320|ref|XP_750509.1| zinc knuckle domain protein (Byr3) [Aspergillus fumigatus Af293]
gi|66848141|gb|EAL88471.1| zinc knuckle domain protein (Byr3), putative [Aspergillus fumigatus
Af293]
gi|159130982|gb|EDP56095.1| zinc knuckle domain protein (Byr3), putative [Aspergillus fumigatus
A1163]
Length = 190
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 57/126 (45%), Gaps = 21/126 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADA--RGDKVGIVCYKCNNYGHFARECA------------- 53
CY C GH C Q S D G CYKC GH AR C+
Sbjct: 66 CYRCGVAGHISRECSQAGSGDNYNGAPSGGQECYKCGQVGHIARNCSQGGNYGGGFGHGG 125
Query: 54 --TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS--SKRCYACHQAGH 109
TCY+C G GH+A+DCT CYNC GH +R+CP ++ + CY C Q GH
Sbjct: 126 YGGRQQTCYSCGGFGHMARDCT--HGQKCYNCGDVGHVSRDCPTEAKGERVCYKCKQPGH 183
Query: 110 MAKECP 115
+ CP
Sbjct: 184 VQAACP 189
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 47 HFARECATESV-TCYNCS---GQGHVAKDCTV-KSSIICYNCNSSGHFARNCPNDSS--- 98
H AR+C + TCYNC GQGHV+++CTV CY C +GH +R C S
Sbjct: 28 HQARDCPKKGTPTCYNCGATIGQGHVSRECTVAPKEKSCYRCGVAGHISRECSQAGSGDN 87
Query: 99 --------KRCYACHQAGHMAKECP---GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ CY C Q GH+A+ C G TCY CG GH++ DC
Sbjct: 88 YNGAPSGGQECYKCGQVGHIARNCSQGGNYGGGFGHGGYGGRQQTCYSCGGFGHMARDCT 147
Query: 148 LVQK 151
QK
Sbjct: 148 HGQK 151
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGI-----VCYKCNNYGHFARECATESVTCYNC 62
+CY C GH +C Q + G CY C +GH AR+C T CYNC
Sbjct: 97 ECYKCGQVGHIARNCSQGGNYGGGFGHGGYGGRQQTCYSCGGFGHMARDC-THGQKCYNC 155
Query: 63 SGQGHVAKDC--TVKSSIICYNCNSSGHFARNCPN 95
GHV++DC K +CY C GH CPN
Sbjct: 156 GDVGHVSRDCPTEAKGERVCYKCKQPGHVQAACPN 190
>gi|219363251|ref|NP_001136805.1| uncharacterized protein LOC100216951 [Zea mays]
gi|194697184|gb|ACF82676.1| unknown [Zea mays]
gi|194699232|gb|ACF83700.1| unknown [Zea mays]
gi|195612644|gb|ACG28152.1| DNA-binding protein HEXBP [Zea mays]
gi|413955600|gb|AFW88249.1| DNA-binding protein HEXBP isoform 1 [Zea mays]
gi|413955601|gb|AFW88250.1| DNA-binding protein HEXBP isoform 2 [Zea mays]
Length = 261
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 78/192 (40%), Gaps = 61/192 (31%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------ESV 57
+S C+NC + GH SCP + +C C GH AR+C E +
Sbjct: 74 SSKGTCWNCKEPGHMANSCPNEG-----------ICRNCGKSGHIARDCTAPPVPPGEVI 122
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP-- 115
C NC GH ++CT + + C NC SGH ARNC ND C C+ AGH+A++CP
Sbjct: 123 LCSNCYKPGHFREECTNEKA--CNNCRQSGHIARNCTNDPV--CNLCNVAGHLARQCPKS 178
Query: 116 ---GQTAGKSP-----------------------------------EPVVDMSLTCYVCG 137
G+ G P + + + C+ CG
Sbjct: 179 DTLGERGGPPPFHGVGAPFRGVGVPFRGGLSDVICRACNQIGHASRDCMAGAFMICHNCG 238
Query: 138 HQGHLSYDCKLV 149
+GH +Y+C V
Sbjct: 239 GRGHTAYECPSV 250
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
+C C GHFAREC + +V C+ C GH+A +C+ K + C+NC GH A +CPN+
Sbjct: 40 LCNNCKRPGHFARECPSVAV-CHTCGLPGHIAAECSSKGT--CWNCKEPGHMANSCPNEG 96
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGH 138
C C ++GH+A++C TA P V + CY GH
Sbjct: 97 I--CRNCGKSGHIARDC---TAPPVPPGEVILCSNCYKPGH 132
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 65/151 (43%), Gaps = 29/151 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGI--------VCYKCNNYGHFARECATESVTCY 60
C NC GH+ CP + G I C+ C GH A C E + C
Sbjct: 41 CNNCKRPGHFARECPSVAVCHTCGLPGHIAAECSSKGTCWNCKEPGHMANSCPNEGI-CR 99
Query: 61 NCSGQGHVAKDCTVK-----SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
NC GH+A+DCT I+C NC GHF C N+ K C C Q+GH+A+ C
Sbjct: 100 NCGKSGHIARDCTAPPVPPGEVILCSNCYKPGHFREECTNE--KACNNCRQSGHIARNC- 156
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ +PV C +C GHL+ C
Sbjct: 157 ------TNDPV------CNLCNVAGHLARQC 175
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 53/145 (36%), Gaps = 42/145 (28%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
+ I C NC+ GH++ C + + C C GH AR C + V C
Sbjct: 116 VPPGEVILCSNCYKPGHFREECTNEKA-----------CNNCRQSGHIARNCTNDPV-CN 163
Query: 61 NCSGQGHVAKDCTVK------------------------------SSIICYNCNSSGHFA 90
C+ GH+A+ C S +IC CN GH +
Sbjct: 164 LCNVAGHLARQCPKSDTLGERGGPPPFHGVGAPFRGVGVPFRGGLSDVICRACNQIGHAS 223
Query: 91 RNCPNDSSKRCYACHQAGHMAKECP 115
R+C + C+ C GH A ECP
Sbjct: 224 RDCMAGAFMICHNCGGRGHTAYECP 248
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 35/79 (44%), Gaps = 18/79 (22%)
Query: 79 ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC-----------PGQTAGKSPEPVV 127
+C NC GHFAR CP S C+ C GH+A EC PG A P +
Sbjct: 40 LCNNCKRPGHFARECP--SVAVCHTCGLPGHIAAECSSKGTCWNCKEPGHMANSCPNEGI 97
Query: 128 DMSLTCYVCGHQGHLSYDC 146
C CG GH++ DC
Sbjct: 98 -----CRNCGKSGHIARDC 111
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSSI 78
RG ++C CN GH +R+C A + C+NC G+GH A +C S I
Sbjct: 205 RGGLSDVICRACNQIGHASRDCMAGAFMICHNCGGRGHTAYECPSVSLI 253
>gi|119177704|ref|XP_001240597.1| hypothetical protein CIMG_07760 [Coccidioides immitis RS]
gi|303315823|ref|XP_003067916.1| zinc knuckle containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240107592|gb|EER25771.1| zinc knuckle containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320032012|gb|EFW13968.1| zinc knuckle nucleic acid binding protein [Coccidioides posadasii
str. Silveira]
gi|392867438|gb|EAS29333.2| zinc knuckle nucleic acid binding protein [Coccidioides immitis RS]
Length = 236
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 64/149 (42%), Gaps = 40/149 (26%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-------- 54
+T T QCY+C GH Q CP + G CY CN GH AR C
Sbjct: 46 TTETKQCYHCQGLGHVQADCP---TLRLNGGATSGRCYNCNLPGHLARNCHNAGMQGAPR 102
Query: 55 ---------------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
+ TCY C G H A+DC + ++ CY C GH +R+C
Sbjct: 103 NVGGARGGFNAPFRGGYGGYPRAATCYKCGGPNHFARDCQAQ-AMKCYACGKLGHISRDC 161
Query: 94 --PN-----DSSKRCYACHQAGHMAKECP 115
PN + K CY C QAGH++++CP
Sbjct: 162 TAPNGGPLSSAGKVCYKCSQAGHISRDCP 190
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 69/180 (38%), Gaps = 60/180 (33%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TESVTCY 60
S CY C + GHY C S+ R +CY C GH + C TE+ CY
Sbjct: 4 SRRACYKCGNIGHYAEVC----SSSER------LCYNCKQPGHESNGCPRPRTTETKQCY 53
Query: 61 NCSGQGHVAKDCTV------KSSIICYNCNSSGHFARNCPN------------------- 95
+C G GHV DC +S CYNCN GH ARNC N
Sbjct: 54 HCQGLGHVQADCPTLRLNGGATSGRCYNCNLPGHLARNCHNAGMQGAPRNVGGARGGFNA 113
Query: 96 ---------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY C H A++C Q ++ CY CG GH+S DC
Sbjct: 114 PFRGGYGGYPRAATCYKCGGPNHFARDCQAQ------------AMKCYACGKLGHISRDC 161
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 57/136 (41%), Gaps = 26/136 (19%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + CY+C GH +CP
Sbjct: 7 ACYKCGNIGHYAEVCSSSERLCYNCKQPGHESNGCPRPRTTETKQCYHCQGLGHVQADCP 66
Query: 95 ------NDSSKRCYACHQAGHMAKECPGQTAGKSPEPV-----------------VDMSL 131
+S RCY C+ GH+A+ C +P V +
Sbjct: 67 TLRLNGGATSGRCYNCNLPGHLARNCHNAGMQGAPRNVGGARGGFNAPFRGGYGGYPRAA 126
Query: 132 TCYVCGHQGHLSYDCK 147
TCY CG H + DC+
Sbjct: 127 TCYKCGGPNHFARDCQ 142
>gi|296412703|ref|XP_002836061.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629863|emb|CAZ80218.1| unnamed protein product [Tuber melanosporum]
Length = 183
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 59/126 (46%), Gaps = 21/126 (16%)
Query: 9 CYNCFDFGHYQYSC---PQK---SSADARGDKVGIVCYKCNNYGHFARECAT-------- 54
CY C GH C PQ+ + G G CYKC GH AR+C
Sbjct: 55 CYRCGQTGHLSRDCNDAPQQVGSFGGGSYGSGGGAECYKCGKVGHIARQCTASGAGYGGP 114
Query: 55 -----ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
TCY+C G GH+++DCT CYNC GH +R+CP++ + CY C Q GH
Sbjct: 115 PGGGARQQTCYSCGGYGHLSRDCTQGQK--CYNCGQIGHLSRDCPSEQDRVCYKCKQPGH 172
Query: 110 MAKECP 115
+ CP
Sbjct: 173 VMASCP 178
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 74/192 (38%), Gaps = 54/192 (28%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSA-------------DARGDKVGIVCYKCNNYGHF 48
S + CYNC + GH CP++ + D G CY+C GH
Sbjct: 5 SGNNARACYNCGEGGHQARECPKRGTPVCYNCGRMFFPRRDCTGPAKEKSCYRCGQTGHL 64
Query: 49 AREC--ATESV--------------TCYNCSGQGHVAKDCTVKSSI------------IC 80
+R+C A + V CY C GH+A+ CT + C
Sbjct: 65 SRDCNDAPQQVGSFGGGSYGSGGGAECYKCGKVGHIARQCTASGAGYGGPPGGGARQQTC 124
Query: 81 YNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQG 140
Y+C GH +R+C ++CY C Q GH++++CP + CY C G
Sbjct: 125 YSCGGYGHLSRDC--TQGQKCYNCGQIGHLSRDCP-----------SEQDRVCYKCKQPG 171
Query: 141 HLSYDCKLVQKS 152
H+ C Q +
Sbjct: 172 HVMASCPEAQAA 183
>gi|159123044|gb|EDP48164.1| zinc knuckle nucleic acid binding protein, putative [Aspergillus
fumigatus A1163]
Length = 233
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 25/116 (21%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARG------------------DKVGIVCYKCNNYGHFA 49
+CYNC GH +CP +S RG CYKC HFA
Sbjct: 73 RCYNCNQPGHLARNCPAPASGAGRGVGAPRGGFNGGFRGGYGGYPRAATCYKCGGPNHFA 132
Query: 50 RECATESVTCYNCSGQGHVAKDCTVK-------SSIICYNCNSSGHFARNCPNDSS 98
R+C ++ CY C GH+++DCT + +CY C+ +GH +R+CPN+ +
Sbjct: 133 RDCQAHAMKCYACGKLGHISRDCTAPNGGPLSSAGKVCYKCSQAGHISRDCPNNDA 188
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 66/163 (40%), Gaps = 32/163 (19%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADA-----------RGDKVGIVCYKCNNYGHFARECAT 54
+I C + GH SCP+ + ++ G G CY CN GH AR C
Sbjct: 31 SIPCQSGKQPGHESSSCPRPRTTESHVQADCPTLRLNGGANG-RCYNCNQPGHLARNCPA 89
Query: 55 ESVTCYNCSGQGHVAKDCTV-----------KSSIICYNCNSSGHFARNCPNDSSKRCYA 103
+ +G+G A + CY C HFAR+C + +CYA
Sbjct: 90 PASG----AGRGVGAPRGGFNGGFRGGYGGYPRAATCYKCGGPNHFARDC-QAHAMKCYA 144
Query: 104 CHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C + GH++++C G P+ CY C GH+S DC
Sbjct: 145 CGKLGHISRDCTAPNGG----PLSSAGKVCYKCSQAGHISRDC 183
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 28/116 (24%)
Query: 53 ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN-----DSSKRCYACHQA 107
A S+ C + GH + C + + H +CP ++ RCY C+Q
Sbjct: 28 ANVSIPCQSGKQPGHESSSCPRPRT-------TESHVQADCPTLRLNGGANGRCYNCNQP 80
Query: 108 GHMAKECPGQTAGK-----SP-----------EPVVDMSLTCYVCGHQGHLSYDCK 147
GH+A+ CP +G +P + TCY CG H + DC+
Sbjct: 81 GHLARNCPAPASGAGRGVGAPRGGFNGGFRGGYGGYPRAATCYKCGGPNHFARDCQ 136
>gi|452985547|gb|EME85303.1| hypothetical protein MYCFIDRAFT_101930, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 184
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 67/144 (46%), Gaps = 28/144 (19%)
Query: 36 GIVCYKCNNYGHFARECATE-SVTCYNCSGQGHVAKDCTVKS-SIICYNCNSSGHFARNC 93
G CY C + H AREC + + TCYNC GQGH+++DCT + CY C +GH +R C
Sbjct: 2 GRACYNCGDTTHQARECPNKGNPTCYNCGGQGHLSRDCTEPAKDKSCYACGETGHMSREC 61
Query: 94 PN---------------DSSKRCYACHQAGHMAKECP-----------GQTAGKSPEPVV 127
PN S + CY C + GH+A+ C G+
Sbjct: 62 PNGGGGGARSGGFGGGAGSDQECYKCGKVGHIARNCTQGGYGGGNFGGGRGGFGGGYGGG 121
Query: 128 DMSLTCYVCGHQGHLSYDCKLVQK 151
+ +CY CG GHLS DC QK
Sbjct: 122 NSQQSCYTCGGYGHLSRDCVQGQK 145
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 56/138 (40%), Gaps = 33/138 (23%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV------CYKCNNYGHFARECA--------- 53
CY C + GH CP AR G CYKC GH AR C
Sbjct: 48 CYACGETGHMSRECPNGGGGGARSGGFGGGAGSDQECYKCGKVGHIARNCTQGGYGGGNF 107
Query: 54 --------------TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS- 98
+CY C G GH+++DC CYNC GH +R+C +++S
Sbjct: 108 GGGRGGFGGGYGGGNSQQSCYTCGGYGHLSRDCV--QGQKCYNCGELGHLSRDCSSEASS 165
Query: 99 -KRCYACHQAGHMAKECP 115
+ CY C Q GH+ CP
Sbjct: 166 ERTCYRCKQPGHVQASCP 183
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 44/103 (42%), Gaps = 16/103 (15%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIV-------------CYKCNNYGHFARECAT 54
+CY C GH +C Q CY C YGH +R+C
Sbjct: 83 ECYKCGKVGHIARNCTQGGYGGGNFGGGRGGFGGGYGGGNSQQSCYTCGGYGHLSRDC-V 141
Query: 55 ESVTCYNCSGQGHVAKDCTVKSS--IICYNCNSSGHFARNCPN 95
+ CYNC GH+++DC+ ++S CY C GH +CPN
Sbjct: 142 QGQKCYNCGELGHLSRDCSSEASSERTCYRCKQPGHVQASCPN 184
>gi|9955402|dbj|BAB12217.1| vasa homolog [Ciona savignyi]
Length = 770
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 67/164 (40%), Gaps = 32/164 (19%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-------TE 55
S+ + C+ C + GH CPQ C+KC GH +REC
Sbjct: 102 SSRSKGCFKCGEEGHMSRECPQGGGGSRG-----KGCFKCGEEGHMSRECPKGGGGGGGG 156
Query: 56 SVTCYNCSGQGHVAKDCT---------VKSSIICYNCNSSGHFARNCPNDSSKR----CY 102
C+ C +GH++++C S C+ C GH +R CP C+
Sbjct: 157 GRGCFKCGEEGHMSRECPKGGDSGFEGRSRSKGCFKCGEEGHMSRECPQGGGGGRGSGCF 216
Query: 103 ACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C + GHM++ECP G C+ CG +GH+S +C
Sbjct: 217 KCGEEGHMSRECPQGGGGGR-------GSGCFKCGEEGHMSREC 253
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 21/134 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----------TESVT 58
C+ C + GH CP+ G C+KC GH +REC + S
Sbjct: 133 CFKCGEEGHMSRECPKGGGGGG---GGGRGCFKCGEEGHMSRECPKGGDSGFEGRSRSKG 189
Query: 59 CYNCSGQGHVAKDC----TVKSSIICYNCNSSGHFARNCPN----DSSKRCYACHQAGHM 110
C+ C +GH++++C C+ C GH +R CP C+ C + GHM
Sbjct: 190 CFKCGEEGHMSRECPQGGGGGRGSGCFKCGEEGHMSRECPQGGGGGRGSGCFKCGEEGHM 249
Query: 111 AKECPGQTAGKSPE 124
++ECP T+G+ E
Sbjct: 250 SRECPRNTSGEGGE 263
>gi|347828527|emb|CCD44224.1| hypothetical protein [Botryotinia fuckeliana]
Length = 280
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 78/208 (37%), Gaps = 77/208 (37%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATES 56
MSS S CY C + GHY C +SA+ +CY C GH + C TE+
Sbjct: 54 MSSLSRRACYKCGNVGHYAEVC---ASAER-------LCYNCKQPGHESNGCPLPRTTEA 103
Query: 57 VTCYNCSGQGHVAKDCTV------KSSIICYNCNSSGHFARNCPNDS------------- 97
CY+C G GHV DC ++ CYNC GH AR CPN +
Sbjct: 104 KQCYHCQGLGHVQADCPTLRISGAGTTGRCYNCGMPGHLARACPNPNNGMQGPPRGLGAP 163
Query: 98 ---------------------------------------SKRCYACHQAGHMAKECPGQT 118
+ +CYAC + GH ++EC
Sbjct: 164 RGGFGGGFAPRGGFAGGPRPATCYKCGGPNHFARDCQAQAMKCYACGRTGHSSRECTSPN 223
Query: 119 AGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G V TCY CG +GH++ DC
Sbjct: 224 GG-----VNKAGKTCYTCGTEGHIARDC 246
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 56/140 (40%), Gaps = 30/140 (21%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
CYKC N GH+A CA+ CYNC GH + C + + CY+C GH +CP
Sbjct: 61 ACYKCGNVGHYAEVCASAERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQADCP 120
Query: 95 N------DSSKRCYACHQAGHMAKECPGQTAGKSPEPV---------------------V 127
++ RCY C GH+A+ CP G P
Sbjct: 121 TLRISGAGTTGRCYNCGMPGHLARACPNPNNGMQGPPRGLGAPRGGFGGGFAPRGGFAGG 180
Query: 128 DMSLTCYVCGHQGHLSYDCK 147
TCY CG H + DC+
Sbjct: 181 PRPATCYKCGGPNHFARDCQ 200
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 60/154 (38%), Gaps = 47/154 (30%)
Query: 3 STSTIQCYNCFDFGHYQYSCP--QKSSADARGDKVGIVCYKCNNYGHFAREC-------- 52
+T QCY+C GH Q CP + S A G CY C GH AR C
Sbjct: 100 TTEAKQCYHCQGLGHVQADCPTLRISGAGTTGR-----CYNCGMPGHLARACPNPNNGMQ 154
Query: 53 -------------------------ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSG 87
TCY C G H A+DC ++ + CY C +G
Sbjct: 155 GPPRGLGAPRGGFGGGFAPRGGFAGGPRPATCYKCGGPNHFARDCQAQA-MKCYACGRTG 213
Query: 88 HFARNCP------NDSSKRCYACHQAGHMAKECP 115
H +R C N + K CY C GH+A++CP
Sbjct: 214 HSSRECTSPNGGVNKAGKTCYTCGTEGHIARDCP 247
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S CY C + GH+A C + + + CY C Q GH + CP P + CY
Sbjct: 58 SRRACYKCGNVGHYAEVCAS-AERLCYNCKQPGHESNGCP--------LPRTTEAKQCYH 108
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ DC ++ S
Sbjct: 109 CQGLGHVQADCPTLRIS 125
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
++CY C GH C +S + +K G CY C GH AR+C ++ + N +G+G
Sbjct: 204 MKCYACGRTGHSSREC---TSPNGGVNKAGKTCYTCGTEGHIARDCPSKGLN-DNLAGEG 259
>gi|70982370|ref|XP_746713.1| zinc knuckle nucleic acid binding protein [Aspergillus fumigatus
Af293]
gi|66844337|gb|EAL84675.1| zinc knuckle nucleic acid binding protein, putative [Aspergillus
fumigatus Af293]
Length = 233
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 25/116 (21%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARG------------------DKVGIVCYKCNNYGHFA 49
+CYNC GH +CP +S RG CYKC HFA
Sbjct: 73 RCYNCNQPGHLARNCPAPASGAGRGVGAPRGGFNGGLRGGYGGYPRAATCYKCGGPNHFA 132
Query: 50 RECATESVTCYNCSGQGHVAKDCTVK-------SSIICYNCNSSGHFARNCPNDSS 98
R+C ++ CY C GH+++DCT + +CY C+ +GH +R+CPN+ +
Sbjct: 133 RDCQAHAMKCYACGKLGHISRDCTAPNGGPLSSAGKVCYKCSQAGHISRDCPNNDA 188
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 64/159 (40%), Gaps = 24/159 (15%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADA-----------RGDKVGIVCYKCNNYGHFARECAT 54
+I C + GH SCP+ + ++ G G CY CN GH AR C
Sbjct: 31 SIPCQSGKQPGHESSSCPRPRTTESHVQADCPTLRLNGGANG-RCYNCNQPGHLARNCPA 89
Query: 55 ESVTCYNCSGQGHVAKDCTV-------KSSIICYNCNSSGHFARNCPNDSSKRCYACHQA 107
+ G + + + CY C HFAR+C + +CYAC +
Sbjct: 90 PASGAGRGVGAPRGGFNGGLRGGYGGYPRAATCYKCGGPNHFARDC-QAHAMKCYACGKL 148
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GH++++C G P+ CY C GH+S DC
Sbjct: 149 GHISRDCTAPNGG----PLSSAGKVCYKCSQAGHISRDC 183
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 28/116 (24%)
Query: 53 ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN-----DSSKRCYACHQA 107
A S+ C + GH + C + + H +CP ++ RCY C+Q
Sbjct: 28 ANVSIPCQSGKQPGHESSSCPRPRT-------TESHVQADCPTLRLNGGANGRCYNCNQP 80
Query: 108 GHMAKECPGQTAGK-----SPE-----------PVVDMSLTCYVCGHQGHLSYDCK 147
GH+A+ CP +G +P + TCY CG H + DC+
Sbjct: 81 GHLARNCPAPASGAGRGVGAPRGGFNGGLRGGYGGYPRAATCYKCGGPNHFARDCQ 136
>gi|430812110|emb|CCJ30446.1| unnamed protein product [Pneumocystis jirovecii]
Length = 197
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSS---IICYNCNSSGHFARNCP 94
CYKC + GHFA CA CYNC GH + C + + CY C S GH +CP
Sbjct: 5 ACYKCGDLGHFADSCAKTDRLCYNCKQPGHESNACPFPRTAERLQCYYCQSIGHIQADCP 64
Query: 95 N------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSL-TCYVCGHQGHLSYDCK 147
+ SS RCY+C GH+A+ C G + +P + C+ CG H + DC+
Sbjct: 65 SFRINTAGSSGRCYSCGMTGHLARSCHGIPSAGTPIHFSAGRMQVCFKCGGPNHYARDCQ 124
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 70/160 (43%), Gaps = 35/160 (21%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-------ATESVTCYN 61
CYNC GH +CP +A+ + CY C + GH +C A S CY+
Sbjct: 26 CYNCKQPGHESNACPFPRTAER------LQCYYCQSIGHIQADCPSFRINTAGSSGRCYS 79
Query: 62 CSGQGHVAKDC------------TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
C GH+A+ C + +C+ C H+AR+C S K CYAC + GH
Sbjct: 80 CGMTGHLARSCHGIPSAGTPIHFSAGRMQVCFKCGGPNHYARDCQAQSVK-CYACGKYGH 138
Query: 110 MAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
++ C E S +CY CG+ HL+ DC +
Sbjct: 139 ISSIC---------ENGSQTSKSCYRCGNLEHLAKDCTTI 169
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 68/161 (42%), Gaps = 44/161 (27%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTCYNCSG 64
CY C D GH+ SC A+ D+ +CY C GH + C E + CY C
Sbjct: 6 CYKCGDLGHFADSC-------AKTDR---LCYNCKQPGHESNACPFPRTAERLQCYYCQS 55
Query: 65 QGHVAKDC------TVKSSIICYNCNSSGHFARNCPNDSS------------KRCYACHQ 106
GH+ DC T SS CY+C +GH AR+C S + C+ C
Sbjct: 56 IGHIQADCPSFRINTAGSSGRCYSCGMTGHLARSCHGIPSAGTPIHFSAGRMQVCFKCGG 115
Query: 107 AGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
H A++C Q S+ CY CG GH+S C+
Sbjct: 116 PNHYARDCQAQ------------SVKCYACGKYGHISSICE 144
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 58/129 (44%), Gaps = 23/129 (17%)
Query: 3 STSTIQCYNCFDFGHYQYSCP--QKSSADARGDKVGIVCYKCNNYGHFAREC-------- 52
+ +QCY C GH Q CP + ++A + G CY C GH AR C
Sbjct: 44 TAERLQCYYCQSIGHIQADCPSFRINTAGSSGR-----CYSCGMTGHLARSCHGIPSAGT 98
Query: 53 -----ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS--SKRCYACH 105
A C+ C G H A+DC + S+ CY C GH + C N S SK CY C
Sbjct: 99 PIHFSAGRMQVCFKCGGPNHYARDCQAQ-SVKCYACGKYGHISSICENGSQTSKSCYRCG 157
Query: 106 QAGHMAKEC 114
H+AK+C
Sbjct: 158 NLEHLAKDC 166
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 2 SSTSTIQCYNCFDFGHYQYSC---PQKSSADARGDKVGIVCYKCNNYGHFARECATESVT 58
++ S+ +CY+C GH SC P + VC+KC H+AR+C +SV
Sbjct: 70 TAGSSGRCYSCGMTGHLARSCHGIPSAGTPIHFSAGRMQVCFKCGGPNHYARDCQAQSVK 129
Query: 59 CYNCSGQGHVAKDCT--VKSSIICYNCNSSGHFARNC 93
CY C GH++ C ++S CY C + H A++C
Sbjct: 130 CYACGKYGHISSICENGSQTSKSCYRCGNLEHLAKDC 166
>gi|425773077|gb|EKV11450.1| Zinc knuckle nucleic acid binding protein, putative [Penicillium
digitatum Pd1]
gi|425778832|gb|EKV16937.1| Zinc knuckle nucleic acid binding protein, putative [Penicillium
digitatum PHI26]
Length = 249
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 73/187 (39%), Gaps = 54/187 (28%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---- 58
S++ CYNC GH +CP + + + CY C GH +C T +
Sbjct: 22 SSTERLCYNCKQPGHESSACPLPRTTETK------QCYNCQGLGHVQADCPTLRLNGGAN 75
Query: 59 --CYNCSGQGHVAKDCTVKSS-------------------------------------II 79
CYNCS GH+A+ CT ++
Sbjct: 76 GRCYNCSQPGHLARSCTNPTAPRAGAPPTGPAAGRGSGGARGGFQGGFRGGFSGYPRAAT 135
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
CY C HFAR+C + +CYAC + GH++++C G P+ CY C
Sbjct: 136 CYKCGGPNHFARDC-QAQAMKCYACGKLGHISRDCTAPNGG----PLSSAGKVCYKCAQA 190
Query: 140 GHLSYDC 146
GH+S DC
Sbjct: 191 GHISRDC 197
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 59/144 (40%), Gaps = 34/144 (23%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
CYKC GH+A C++ CYNC GH + C + + CYNC GH +CP
Sbjct: 7 ACYKCGTIGHYAEVCSSTERLCYNCKQPGHESSACPLPRTTETKQCYNCQGLGHVQADCP 66
Query: 95 N-----DSSKRCYACHQAGHMAKECPGQTAGKSPEPVV---------------------- 127
++ RCY C Q GH+A+ C TA ++ P
Sbjct: 67 TLRLNGGANGRCYNCSQPGHLARSCTNPTAPRAGAPPTGPAAGRGSGGARGGFQGGFRGG 126
Query: 128 ----DMSLTCYVCGHQGHLSYDCK 147
+ TCY CG H + DC+
Sbjct: 127 FSGYPRAATCYKCGGPNHFARDCQ 150
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 50/124 (40%), Gaps = 35/124 (28%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKV----------------------------GIVC 39
+CYNC GH SC ++ A C
Sbjct: 77 RCYNCSQPGHLARSCTNPTAPRAGAPPTGPAAGRGSGGARGGFQGGFRGGFSGYPRAATC 136
Query: 40 YKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVK-------SSIICYNCNSSGHFARN 92
YKC HFAR+C +++ CY C GH+++DCT + +CY C +GH +R+
Sbjct: 137 YKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGGPLSSAGKVCYKCAQAGHISRD 196
Query: 93 CPND 96
CP +
Sbjct: 197 CPTN 200
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT 54
++CY C GH C + G VCYKC GH +R+C T
Sbjct: 154 MKCYACGKLGHISRDCTAPNGGPL--SSAGKVCYKCAQAGHISRDCPT 199
>gi|402082586|gb|EJT77604.1| hypothetical protein GGTG_02710 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 521
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 66/146 (45%), Gaps = 18/146 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC + GH CPQ ++ I C CN GH +R+C V C NC
Sbjct: 292 RCRNCEELGHETRDCPQDK---VERQQLVIECINCNEPGHRSRDCPQARVDKFACKNCGK 348
Query: 65 QGHVAKDCTVKS----SIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAG 120
GH +K+C + + C C GHFA++CP C C Q GHM+++C
Sbjct: 349 SGHTSKECEEERVCPPDMECRKCGECGHFAKDCPKGGGNGCRNCGQEGHMSRDC------ 402
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDC 146
EP ++ C C GH+S +C
Sbjct: 403 --TEPKNMANVQCRNCDEFGHVSKEC 426
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 65/149 (43%), Gaps = 23/149 (15%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-----TCY 60
I+C NC + GH CPQ AR DK C C GH ++EC E V C
Sbjct: 317 VIECINCNEPGHRSRDCPQ-----ARVDK--FACKNCGKSGHTSKECEEERVCPPDMECR 369
Query: 61 NCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC---PNDSSKRCYACHQAGHMAKECPGQ 117
C GH AKDC C NC GH +R+C N ++ +C C + GH++KEC
Sbjct: 370 KCGECGHFAKDCPKGGGNGCRNCGQEGHMSRDCTEPKNMANVQCRNCDEFGHVSKEC--- 426
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
P+P + C C GH C
Sbjct: 427 -----PKPRDISRVKCSNCQEMGHFKSKC 450
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 39 CYKCNNYGHFARECATESV---TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
C+ C GH +C V TC C+ +GH+ +DC + + C +C GH +++CP
Sbjct: 83 CFNCGEAGHNKADCTKPRVFDGTCRVCNKEGHIGRDCPDRPPMQCRSCGEDGHMSKDCP- 141
Query: 96 DSSKRCYACHQAGHMAKEC 114
SK C C + GH A EC
Sbjct: 142 --SKTCPNCKEPGHTAAEC 158
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 16/94 (17%)
Query: 59 CYNCSGQGHVAKDCTVKSSI--ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
C+NC GH DCT C CN GH R+CP+ +C +C + GHM+K+CP
Sbjct: 83 CFNCGEAGHNKADCTKPRVFDGTCRVCNKEGHIGRDCPDRPPMQCRSCGEDGHMSKDCP- 141
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
S TC C GH + +C+ +
Sbjct: 142 -------------SKTCPNCKEPGHTAAECEAAR 162
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 15/74 (20%)
Query: 80 CYNCNSSGHFARNCPNDSSKR------CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTC 133
C NC GH R+CP D +R C C++ GH +++CP K C
Sbjct: 293 CRNCEELGHETRDCPQDKVERQQLVIECINCNEPGHRSRDCPQARVDK---------FAC 343
Query: 134 YVCGHQGHLSYDCK 147
CG GH S +C+
Sbjct: 344 KNCGKSGHTSKECE 357
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 16/85 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADAR--------------GDKVGIVCYKCNNYGHFARECA 53
+C+NC + GH + C + D D+ + C C GH +++C
Sbjct: 82 KCFNCGEAGHNKADCTKPRVFDGTCRVCNKEGHIGRDCPDRPPMQCRSCGEDGHMSKDCP 141
Query: 54 TESVTCYNCSGQGHVAKDCTVKSSI 78
S TC NC GH A +C I
Sbjct: 142 --SKTCPNCKEPGHTAAECEAARFI 164
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV 57
+ + +QC NC +FGH CP+ D + C C GHF +C V
Sbjct: 407 NMANVQCRNCDEFGHVSKECPKPR------DISRVKCSNCQEMGHFKSKCTKPHV 455
>gi|154345724|ref|XP_001568799.1| putative poly-zinc finger protein 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066141|emb|CAM43931.1| putative poly-zinc finger protein 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 135
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 18/124 (14%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-----TES 56
S+ + C+ C GH C SA+ C+ C+ GH AREC +E+
Sbjct: 18 SAADSAPCFRCGQPGHVAKECLSTISAEE------APCFFCHKAGHRARECPEAPPKSET 71
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP-----NDSSKRCYACHQAGHMA 111
V CYNCS +GH+A +CT ++ CY CN GH R+CP + + K C C + GH+
Sbjct: 72 VMCYNCSQKGHIASECT--NNPHCYLCNEDGHVGRSCPAAPKRSAADKTCRKCGKKGHLR 129
Query: 112 KECP 115
K+CP
Sbjct: 130 KDCP 133
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 64/133 (48%), Gaps = 24/133 (18%)
Query: 37 IVCYKCNNYGHFAREC--ATESVTCYNCSGQGHVAKDCTVKSS---IICYNCNSSGHFAR 91
+VCY+C GH +REC A +S C+ C GHVAK+C S C+ C+ +GH AR
Sbjct: 1 MVCYRCGGVGHQSRECTSAADSAPCFRCGQPGHVAKECLSTISAEEAPCFFCHKAGHRAR 60
Query: 92 NCPNDSSK----RCYACHQAGHMAKECP--------------GQTAGKSPEPVVDMSLTC 133
CP K CY C Q GH+A EC G++ +P+ TC
Sbjct: 61 ECPEAPPKSETVMCYNCSQKGHIASECTNNPHCYLCNEDGHVGRSCPAAPKRSA-ADKTC 119
Query: 134 YVCGHQGHLSYDC 146
CG +GHL DC
Sbjct: 120 RKCGKKGHLRKDC 132
>gi|294943015|ref|XP_002783737.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239896385|gb|EER15533.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 110
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 12/90 (13%)
Query: 38 VCYKCNNYGHFARECATE----------SVTCYNCSGQGHVAKDCTVKSS--IICYNCNS 85
C+ CN GH+AR C + CYNC H+A+DC S C+ C
Sbjct: 9 ACFICNETGHYARNCPRQFDDDSRARRRPQNCYNCGQPDHLARDCPKDQSNDRPCFKCQQ 68
Query: 86 SGHFARNCPNDSSKRCYACHQAGHMAKECP 115
GHFAR+CP+ ++ C+ C Q+GH+A+ECP
Sbjct: 69 VGHFARDCPSADTRNCFRCGQSGHLARECP 98
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 1 MSSTSTIQ-CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE---S 56
M++T+ Q C+ C + GHY +CP++ D+R + CY C H AR+C +
Sbjct: 1 MAATAPSQACFICNETGHYARNCPRQFDDDSRARRRPQNCYNCGQPDHLARDCPKDQSND 60
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
C+ C GH A+DC + C+ C SGH AR CP
Sbjct: 61 RPCFKCQQVGHFARDCPSADTRNCFRCGQSGHLARECP 98
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 23/96 (23%)
Query: 73 TVKSSIICYNCNSSGHFARNCP----NDSSKR-----CYACHQAGHMAKECPGQTAGKSP 123
S C+ CN +GH+ARNCP +DS R CY C Q H+A++CP + P
Sbjct: 3 ATAPSQACFICNETGHYARNCPRQFDDDSRARRRPQNCYNCGQPDHLARDCPKDQSNDRP 62
Query: 124 -------------EPVVDMSLTCYVCGHQGHLSYDC 146
P D + C+ CG GHL+ +C
Sbjct: 63 CFKCQQVGHFARDCPSAD-TRNCFRCGQSGHLAREC 97
>gi|261332658|emb|CBH15653.1| universal minicircle sequence binding protein,putative [Trypanosoma
brucei gambiense DAL972]
Length = 214
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 64/170 (37%), Gaps = 32/170 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------------ES 56
CY C H CP G G CY C GHF+REC
Sbjct: 46 CYTCGQPDHLSRDCPSNRGLHPMGG--GRACYNCGQPGHFSRECPNMRGGPMGGAPMGGG 103
Query: 57 VTCYNCSGQGHVAKDCT-----------VKSSIICYNCNSSGHFARNCPNDSSKR----- 100
CYNC GH +++C + CYNC GHF+R CPN
Sbjct: 104 RACYNCGQPGHFSRECPNMRGGPMGGAPMGGGRACYNCGQPGHFSRECPNMRGGNMGGGR 163
Query: 101 -CYACHQAGHMAKECPG-QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
CY C Q GH+A+ECP + C+ CG GHLS C +
Sbjct: 164 ACYHCQQEGHIARECPNAPADAAAGGAAAGGGRACFNCGQPGHLSRACPV 213
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 61/148 (41%), Gaps = 25/148 (16%)
Query: 24 QKSSADARGDKVGIVCYKCNNYGHFARECATE-------SVTCYNCSGQGHVAKDCTVKS 76
+ S+A + G C++C GHFARE CY C H+++DC
Sbjct: 4 EASTAKRHRAEGGNNCHRCGQPGHFARENVRTFPQGQWGDRACYTCGQPDHLSRDCPSNR 63
Query: 77 SI-------ICYNCNSSGHFARNCPN-----------DSSKRCYACHQAGHMAKECPGQT 118
+ CYNC GHF+R CPN + CY C Q GH ++ECP
Sbjct: 64 GLHPMGGGRACYNCGQPGHFSRECPNMRGGPMGGAPMGGGRACYNCGQPGHFSRECPNMR 123
Query: 119 AGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G + CY CG GH S +C
Sbjct: 124 GGPMGGAPMGGGRACYNCGQPGHFSREC 151
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 66/168 (39%), Gaps = 38/168 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE--------SVTCY 60
C+ C GH+ + GD+ CY C H +R+C + CY
Sbjct: 19 CHRCGQPGHFARENVRTFPQGQWGDRA---CYTCGQPDHLSRDCPSNRGLHPMGGGRACY 75
Query: 61 NCSGQGHVAKDCT-----------VKSSIICYNCNSSGHFARNCPN-----------DSS 98
NC GH +++C + CYNC GHF+R CPN
Sbjct: 76 NCGQPGHFSRECPNMRGGPMGGAPMGGGRACYNCGQPGHFSRECPNMRGGPMGGAPMGGG 135
Query: 99 KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY C Q GH ++ECP G + CY C +GH++ +C
Sbjct: 136 RACYNCGQPGHFSRECPNMRGG-----NMGGGRACYHCQQEGHIAREC 178
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 32/80 (40%), Gaps = 16/80 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---------- 58
CYNC GH+ CP + G CY C GH AREC
Sbjct: 138 CYNCGQPGHFSRECPNMRGGNM---GGGRACYHCQQEGHIARECPNAPADAAAGGAAAGG 194
Query: 59 ---CYNCSGQGHVAKDCTVK 75
C+NC GH+++ C VK
Sbjct: 195 GRACFNCGQPGHLSRACPVK 214
>gi|255538826|ref|XP_002510478.1| cellular nucleic acid binding protein, putative [Ricinus communis]
gi|223551179|gb|EEF52665.1| cellular nucleic acid binding protein, putative [Ricinus communis]
Length = 256
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 71/153 (46%), Gaps = 25/153 (16%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------ 57
T+ +C+NC + GH +CP + +C+ C GH AR+C+T +
Sbjct: 86 TTQSRCWNCREPGHVASNCPNEG-----------ICHSCGKSGHRARDCSTPDMPPGDLR 134
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG- 116
C NC GH+A CT + C NC +GH AR+C N+ C C+ AGH+A++CP
Sbjct: 135 LCNNCYKPGHIAAQCTNDKA--CKNCRKTGHVARDCQNEPV--CNFCNIAGHVARQCPKV 190
Query: 117 ---QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G L C C GH+S DC
Sbjct: 191 DIHAERGGWGRHNGYRDLICRTCNQVGHMSRDC 223
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 64/117 (54%), Gaps = 13/117 (11%)
Query: 31 RGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFA 90
RG +C C GHFAREC +V C NC GH+A +CT +S C+NC GH A
Sbjct: 45 RGFSQSSLCNNCKRPGHFARECPNVAV-CNNCGLPGHIAAECTTQSR--CWNCREPGHVA 101
Query: 91 RNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPE-PVVDMSLTCYVCGHQGHLSYDC 146
NCPN+ C++C ++GH A++C +P+ P D+ L C C GH++ C
Sbjct: 102 SNCPNEGI--CHSCGKSGHRARDC------STPDMPPGDLRL-CNNCYKPGHIAAQC 149
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 65/144 (45%), Gaps = 32/144 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NC GH+ CP + VC C GH A EC T+S C+NC GHV
Sbjct: 53 CNNCKRPGHFARECPNVA-----------VCNNCGLPGHIAAECTTQS-RCWNCREPGHV 100
Query: 69 AKDCTVKSSIICYNCNSSGHFARNC-----PNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
A +C + IC++C SGH AR+C P + C C++ GH+A +C A
Sbjct: 101 ASNCPNEG--ICHSCGKSGHRARDCSTPDMPPGDLRLCNNCYKPGHIAAQCTNDKA---- 154
Query: 124 EPVVDMSLTCYVCGHQGHLSYDCK 147
C C GH++ DC+
Sbjct: 155 ---------CKNCRKTGHVARDCQ 169
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 17/107 (15%)
Query: 40 YKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK 99
Y+ Y R ++S C NC GH A++C + +C NC GH A C S
Sbjct: 34 YRDAPYRRETRRGFSQSSLCNNCKRPGHFARECP--NVAVCNNCGLPGHIAAECTTQS-- 89
Query: 100 RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
RC+ C + GH+A CP + C+ CG GH + DC
Sbjct: 90 RCWNCREPGHVASNCPNEG-------------ICHSCGKSGHRARDC 123
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 48/130 (36%), Gaps = 28/130 (21%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
M C NC+ GH C + C C GH AR+C E V C
Sbjct: 128 MPPGDLRLCNNCYKPGHIAAQCTNDKA-----------CKNCRKTGHVARDCQNEPV-CN 175
Query: 61 NCSGQGHVAKDCTVKS---------------SIICYNCNSSGHFARNCPNDSSKRCYACH 105
C+ GHVA+ C +IC CN GH +R+C C+ C
Sbjct: 176 FCNIAGHVARQCPKVDIHAERGGWGRHNGYRDLICRTCNQVGHMSRDCIGPMII-CHNCG 234
Query: 106 QAGHMAKECP 115
GH A ECP
Sbjct: 235 GRGHRAFECP 244
>gi|342186041|emb|CCC95526.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 492
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQ 65
+++C+ C GH +CPQ CY C N+GH ++ C + + C++CS
Sbjct: 77 SMECFQCHQKGHTMPTCPQTR------------CYNCGNFGHSSQRCLSRPL-CFHCSAP 123
Query: 66 GHVAKDCTVKSS-IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
GH + DC +K+ +CY C GH +C + C+ CHQAGH+A CP
Sbjct: 124 GHRSTDCQLKTRGRVCYRCKEPGHEMADC--SLTALCFTCHQAGHVAARCP 172
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 18/116 (15%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVT 58
M + +CYNC +FGH C + +C+ C+ GH + +C T
Sbjct: 90 MPTCPQTRCYNCGNFGHSSQRCLSRP-----------LCFHCSAPGHRSTDCQLKTRGRV 138
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
CY C GH DC++ + +C+ C+ +GH A CP RC A GH A C
Sbjct: 139 CYRCKEPGHEMADCSL--TALCFTCHQAGHVAARCPEGLCSRCNA---RGHTAAAC 189
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 58/160 (36%), Gaps = 40/160 (25%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------ 54
M + T+ C NC H+ +CP + C C GH +C
Sbjct: 1 MKGSLTVACSNCLAEDHFFQNCPL------------VKCLVCGETGHSRDDCTNAKKRPR 48
Query: 55 -----ESVTCYNCSGQGHVAKDCTVKS-SIICYNCNSSGHFARNCPNDSSKRCYACHQAG 108
E+ C C H C V++ S+ C+ C+ GH CP RCY C G
Sbjct: 49 SGEEEEASVCRGCGSSRHSQSSCPVRARSMECFQCHQKGHTMPTCPQ---TRCYNCGNFG 105
Query: 109 HMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
H ++ C + C+ C GH S DC+L
Sbjct: 106 HSSQRCLSRP-------------LCFHCSAPGHRSTDCQL 132
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 58/146 (39%), Gaps = 18/146 (12%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKV-GIVCYKCNNYGHFARECATE--SVTCYNCS 63
++C C + GH + C G++ VC C + H C S+ C+ C
Sbjct: 25 VKCLVCGETGHSRDDCTNAKKRPRSGEEEEASVCRGCGSSRHSQSSCPVRARSMECFQCH 84
Query: 64 GQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
+GH C CYNC + GH ++ C S C+ C GH + +C +T G+
Sbjct: 85 QKGHTMPTC---PQTRCYNCGNFGHSSQRCL--SRPLCFHCSAPGHRSTDCQLKTRGR-- 137
Query: 124 EPVVDMSLTCYVCGHQGHLSYDCKLV 149
CY C GH DC L
Sbjct: 138 --------VCYRCKEPGHEMADCSLT 155
>gi|241911781|gb|ACS71750.1| RGD1 toxin protein [Lethenteron camtschaticum]
Length = 140
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 60/142 (42%), Gaps = 36/142 (25%)
Query: 39 CYKCNNYGHFARECATESVT------------------CYNCSGQGHVAKDCTVKSSII- 79
C++C GH+AREC + CY C GH+A++C + +
Sbjct: 6 CFRCGGSGHWARECPNGAGGGRGPGGPVGRGGRGRGDGCYRCGEGGHIARECPLPQDSVS 65
Query: 80 -----CYNCNSSGHFARNCPNDSSKR-----CYACHQAGHMAKECPGQTAGKSPEPVVDM 129
CYNC GH AR CP R CY C + GH+A+EC + G P
Sbjct: 66 SNTAACYNCGKGGHIARECPEGRQDRGGGPSCYTCGKQGHLAREC--SSGGGGP-----G 118
Query: 130 SLTCYVCGHQGHLSYDCKLVQK 151
CY CG +GH+ DC +
Sbjct: 119 DNKCYGCGQRGHMQRDCTKASR 140
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 11/80 (13%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVG-IVCYKCNNYGHFARECATESV---- 57
S++T CYNC GH CP + R D+ G CY C GH AREC++
Sbjct: 65 SSNTAACYNCGKGGHIARECP-----EGRQDRGGGPSCYTCGKQGHLARECSSGGGGPGD 119
Query: 58 -TCYNCSGQGHVAKDCTVKS 76
CY C +GH+ +DCT S
Sbjct: 120 NKCYGCGQRGHMQRDCTKAS 139
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 40/95 (42%), Gaps = 13/95 (13%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE------SVTCYNC 62
CY C + GH CP + + CY C GH AREC +CY C
Sbjct: 44 CYRCGEGGHIARECPLPQDSVSSNT---AACYNCGKGGHIARECPEGRQDRGGGPSCYTC 100
Query: 63 SGQGHVAKDCTVKSSII----CYNCNSSGHFARNC 93
QGH+A++C+ CY C GH R+C
Sbjct: 101 GKQGHLARECSSGGGGPGDNKCYGCGQRGHMQRDC 135
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 44/109 (40%), Gaps = 38/109 (34%)
Query: 76 SSIICYNCNSSGHFARNCPN-----------------DSSKRCYACHQAGHMAKECP--- 115
SS C+ C SGH+AR CPN CY C + GH+A+ECP
Sbjct: 2 SSNECFRCGGSGHWARECPNGAGGGRGPGGPVGRGGRGRGDGCYRCGEGGHIARECPLPQ 61
Query: 116 ----------------GQTAGKSPEPVVDM--SLTCYVCGHQGHLSYDC 146
G A + PE D +CY CG QGHL+ +C
Sbjct: 62 DSVSSNTAACYNCGKGGHIARECPEGRQDRGGGPSCYTCGKQGHLAREC 110
>gi|395754126|ref|XP_003779713.1| PREDICTED: zinc finger CCHC domain-containing protein 13-like
[Pongo abelii]
Length = 170
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE-SVTCYNCSGQGH 67
CYNC GH C + + CY C GH AR+C + CY+C GH
Sbjct: 67 CYNCGRSGHIAKDCKEPKRERHQH------CYTCGRLGHLARDCDRQKEQKCYSCGKLGH 120
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQT 118
+ KDC + + CY C GH A NC S CY C ++GH+A+ECP +
Sbjct: 121 IQKDC---AQVKCYRCGEIGHVAINCSKASQVNCYRCGKSGHLARECPSEV 168
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 55/122 (45%), Gaps = 10/122 (8%)
Query: 35 VGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFAR 91
+ CY C A+ C CYNC GH+AKDC + CY C GH AR
Sbjct: 43 LSYTCYCCGESSRHAKNCVLLGNICYNCGRSGHIAKDCKEPKRERHQHCYTCGRLGHLAR 102
Query: 92 NCPNDSSKRCYACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSY 144
+C ++CY+C + GH+ K+C G+ + + CY CG GHL+
Sbjct: 103 DCDRQKEQKCYSCGKLGHIQKDCAQVKCYRCGEIGHVAINCSKASQVNCYRCGKSGHLAR 162
Query: 145 DC 146
+C
Sbjct: 163 EC 164
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 50/100 (50%), Gaps = 15/100 (15%)
Query: 54 TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHM 110
T S TCY C AK+C + +I CYNC SGH A++C +R CY C + GH+
Sbjct: 42 TLSYTCYCCGESSRHAKNCVLLGNI-CYNCGRSGHIAKDCKEPKRERHQHCYTCGRLGHL 100
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
A++C Q K CY CG GH+ DC V+
Sbjct: 101 ARDCDRQKEQK-----------CYSCGKLGHIQKDCAQVK 129
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 9/51 (17%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE 55
+ ++CY C + GH +C + S + CY+C GH AREC +E
Sbjct: 126 AQVKCYRCGEIGHVAINCSKASQVN---------CYRCGKSGHLARECPSE 167
>gi|171694371|ref|XP_001912110.1| hypothetical protein [Podospora anserina S mat+]
gi|170947134|emb|CAP73939.1| unnamed protein product [Podospora anserina S mat+]
Length = 145
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 58/133 (43%), Gaps = 25/133 (18%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKV---GIVCYKCNNYGHFARECAT-------- 54
T CY C GH CP R CYKC GH AR C
Sbjct: 12 TKTCYRCGQAGHISRDCPTGGDQGPRQGGGGGSSAECYKCGEVGHIARNCQKGGNSYGGG 71
Query: 55 ---------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS---KRCY 102
TCY+C G GH+++DC + CYNC SGH +R CP +S+ K CY
Sbjct: 72 YNSGYGGNFNQKTCYSCGGMGHLSRDCVNGNK--CYNCGVSGHLSRECPKESTGGEKICY 129
Query: 103 ACHQAGHMAKECP 115
C Q+GH+ +CP
Sbjct: 130 KCQQSGHVQSQCP 142
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 39/145 (26%)
Query: 31 RGDKVGIVCYKCNNYGHFARECAT-------------ESVTCYNCSGQGHVAKDCTVK-- 75
G K CY+C GH +R+C T S CY C GH+A++C
Sbjct: 7 EGPKDTKTCYRCGQAGHISRDCPTGGDQGPRQGGGGGSSAECYKCGEVGHIARNCQKGGN 66
Query: 76 --------------SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGK 121
+ CY+C GH +R+C N + +CY C +GH+++ECP ++ G
Sbjct: 67 SYGGGYNSGYGGNFNQKTCYSCGGMGHLSRDCVNGN--KCYNCGVSGHLSRECPKESTGG 124
Query: 122 SPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C GH+ C
Sbjct: 125 EK--------ICYKCQQSGHVQSQC 141
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 11/103 (10%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGI-------VCYKCNNYGHFARECATESV 57
S+ +CY C + GH +C + ++ G G CY C GH +R+C +
Sbjct: 44 SSAECYKCGEVGHIARNCQKGGNSYGGGYNSGYGGNFNQKTCYSCGGMGHLSRDCVNGN- 102
Query: 58 TCYNCSGQGHVAKDCTVKSS---IICYNCNSSGHFARNCPNDS 97
CYNC GH++++C +S+ ICY C SGH CPN +
Sbjct: 103 KCYNCGVSGHLSRECPKESTGGEKICYKCQQSGHVQSQCPNSA 145
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 89 FARNCPN--DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMS-LTCYVCGHQGHLSYD 145
+R+CP +K CY C QAGH++++CP + S CY CG GH++ +
Sbjct: 1 MSRDCPEGPKDTKTCYRCGQAGHISRDCPTGGDQGPRQGGGGGSSAECYKCGEVGHIARN 60
Query: 146 CK 147
C+
Sbjct: 61 CQ 62
>gi|291244816|ref|XP_002742290.1| PREDICTED: Vasa-like, partial [Saccoglossus kowalevskii]
Length = 679
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 60/137 (43%), Gaps = 25/137 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA------TESVTCYNC 62
C+ C + GH CP+ R C+KC GH +REC C+ C
Sbjct: 126 CFKCGEEGHMSRECPKGGGGGGR------GCFKCGEDGHMSRECPQGGGGGGRGRGCFKC 179
Query: 63 SGQGHVAKDCTVKSSII-----CYNCNSSGHFARNCPNDSS--------KRCYACHQAGH 109
+GH+++DCT C+ C SGHF+R CPN S C+ C ++GH
Sbjct: 180 GEEGHMSRDCTSGGLGKSSGGGCFKCGESGHFSRECPNAESGGGGGGGGGNCFRCGESGH 239
Query: 110 MAKECPGQTAGKSPEPV 126
AK+C + + PV
Sbjct: 240 FAKDCTNEDTREGAAPV 256
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 24/152 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TESVTCYNCSG 64
C+ C + GH CP +G G C+KC GH +REC C+ C
Sbjct: 103 CFKCGEEGHMSRECP-------KGGGGGRNCFKCGEEGHMSRECPKGGGGGGRGCFKCGE 155
Query: 65 QGHVAKDC-----TVKSSIICYNCNSSGHFARNCPNDSSKR-----CYACHQAGHMAKEC 114
GH++++C C+ C GH +R+C + + C+ C ++GH ++EC
Sbjct: 156 DGHMSRECPQGGGGGGRGRGCFKCGEEGHMSRDCTSGGLGKSSGGGCFKCGESGHFSREC 215
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
P +S C+ CG GH + DC
Sbjct: 216 PN---AESGGGGGGGGGNCFRCGESGHFAKDC 244
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 22/124 (17%)
Query: 39 CYKCNNYGHFARECATESV-----------TCYNCSGQGHVAKDCTV--KSSIICYNCNS 85
C+KC GH +REC +C+ C +GH++++C C+ C
Sbjct: 72 CFKCGEEGHMSRECPKGGGGGGGGSGGGDRSCFKCGEEGHMSRECPKGGGGGRNCFKCGE 131
Query: 86 SGHFARNCPN---DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHL 142
GH +R CP + C+ C + GHM++ECP G C+ CG +GH+
Sbjct: 132 EGHMSRECPKGGGGGGRGCFKCGEDGHMSRECPQGGGGGG------RGRGCFKCGEEGHM 185
Query: 143 SYDC 146
S DC
Sbjct: 186 SRDC 189
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 63/150 (42%), Gaps = 18/150 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKV-GIVCYKCNNYGHFARECATES---VTCYNCSG 64
C+ C + GH CP+ G C+KC GH +REC C+ C
Sbjct: 72 CFKCGEEGHMSRECPKGGGGGGGGSGGGDRSCFKCGEEGHMSRECPKGGGGGRNCFKCGE 131
Query: 65 QGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKR-----CYACHQAGHMAKECPG 116
+GH++++C C+ C GH +R CP C+ C + GHM+++C
Sbjct: 132 EGHMSRECPKGGGGGGRGCFKCGEDGHMSRECPQGGGGGGRGRGCFKCGEEGHMSRDCTS 191
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GKS C+ CG GH S +C
Sbjct: 192 GGLGKS------SGGGCFKCGESGHFSREC 215
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 99 KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ C+ C + GHM++ECP + G +C+ CG +GH+S +C
Sbjct: 70 RNCFKCGEEGHMSRECP-KGGGGGGGGSGGGDRSCFKCGEEGHMSREC 116
>gi|225458097|ref|XP_002279470.1| PREDICTED: zinc finger protein GIS2-like isoform 2 [Vitis vinifera]
Length = 157
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 16/122 (13%)
Query: 38 VCYKCNNYGHFARECATESV------TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFAR 91
+C+ CN GH AR+C T + C NC QGH+A DCT + C NC +GH AR
Sbjct: 10 ICHSCNKTGHRARDCPTPGLPSGDLRLCNNCYKQGHIAADCTNDKA--CKNCRKTGHIAR 67
Query: 92 NCPNDSSKRCYACHQAGHMAKECP-----GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+C N+ C C+ AGH+A++CP G+ G + C C GH+S DC
Sbjct: 68 DCQNEPV--CNLCNIAGHVARQCPKAEIFGERGGGGRNTGF-RDVICRSCNQVGHMSRDC 124
Query: 147 KL 148
+
Sbjct: 125 MV 126
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 59/140 (42%), Gaps = 29/140 (20%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
+ S C NC+ GH +AD DK C C GH AR+C E V C
Sbjct: 29 LPSGDLRLCNNCYKQGHI--------AADCTNDKA---CKNCRKTGHIARDCQNEPV-CN 76
Query: 61 NCSGQGHVAKDC---------------TVKSSIICYNCNSSGHFARNCPNDSSKRCYACH 105
C+ GHVA+ C T +IC +CN GH +R+C S C C
Sbjct: 77 LCNIAGHVARQCPKAEIFGERGGGGRNTGFRDVICRSCNQVGHMSRDC-MVSLVICNNCG 135
Query: 106 QAGHMAKECP-GQTAGKSPE 124
GHMA ECP G+ + P
Sbjct: 136 GRGHMAFECPSGRFMDRMPR 155
>gi|440634656|gb|ELR04575.1| hypothetical protein GMDG_06859 [Geomyces destructans 20631-21]
Length = 224
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 76/193 (39%), Gaps = 55/193 (28%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---- 58
S++ CYNC GH CP + +A+ CY C+ GH +C T +
Sbjct: 23 SSAERLCYNCKQPGHESNGCPLPRTTEAK------QCYSCSGIGHVQADCPTLRLAGTSG 76
Query: 59 -CYNCSGQGHVAKDCTV---------------------------------------KSSI 78
CY+C GH+A+DC+
Sbjct: 77 RCYSCGLLGHLARDCSAPPGVGGMGPGMGPGVGRGGFAPRGGFQGGLAQRGGAFQGPRPT 136
Query: 79 ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGH 138
C+ C HFAR+C + K C+AC + GH++++C G P+ TCY CG
Sbjct: 137 TCHKCGERNHFARDCKAQALK-CFACGKFGHISRDCTAPNGG----PLNTAGKTCYQCGE 191
Query: 139 QGHLSYDCKLVQK 151
GH+S DC Q+
Sbjct: 192 AGHISRDCPQSQR 204
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
CYKC GH A EC++ CYNC GH + C + + CY+C+ GH +CP
Sbjct: 8 ACYKCGQIGHTANECSSAERLCYNCKQPGHESNGCPLPRTTEAKQCYSCSGIGHVQADCP 67
Query: 95 N----DSSKRCYACHQAGHMAKEC 114
+S RCY+C GH+A++C
Sbjct: 68 TLRLAGTSGRCYSCGLLGHLARDC 91
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 12/66 (18%)
Query: 97 SSKRCYACHQAGHMAKEC------------PGQTAGKSPEPVVDMSLTCYVCGHQGHLSY 144
S + CY C Q GH A EC PG + P P + CY C GH+
Sbjct: 5 SRRACYKCGQIGHTANECSSAERLCYNCKQPGHESNGCPLPRTTEAKQCYSCSGIGHVQA 64
Query: 145 DCKLVQ 150
DC ++
Sbjct: 65 DCPTLR 70
>gi|116786624|gb|ABK24177.1| unknown [Picea sitchensis]
Length = 248
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
C C GHFAR+C SV C NC GH+A +CT KS +C+NC GH A C ND
Sbjct: 41 ACKNCKRPGHFARDCPNVSV-CNNCGLPGHIAVECTTKS--LCWNCREPGHVASQCSNDP 97
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C+ C ++GH++++C TA + P + + CY QGH++ +C
Sbjct: 98 I--CHTCGKSGHLSRDC---TAPELPPGDIRLCNNCY---KQGHIAAEC 138
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 65/143 (45%), Gaps = 32/143 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NC GH+ CP S VC C GH A EC T+S+ C+NC GHV
Sbjct: 42 CKNCKRPGHFARDCPNVS-----------VCNNCGLPGHIAVECTTKSL-CWNCREPGHV 89
Query: 69 AKDCTVKSSIICYNCNSSGHFARNC-----PNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
A C+ + IC+ C SGH +R+C P + C C++ GH+A EC + A
Sbjct: 90 ASQCS--NDPICHTCGKSGHLSRDCTAPELPPGDIRLCNNCYKQGHIAAECTNEKA---- 143
Query: 124 EPVVDMSLTCYVCGHQGHLSYDC 146
C C GHL+ DC
Sbjct: 144 ---------CNNCRKTGHLARDC 157
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 70/159 (44%), Gaps = 43/159 (27%)
Query: 9 CYNCFDFGHYQYSC--PQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
C+ C GH C P+ D R +C C GH A EC E C NC G
Sbjct: 99 CHTCGKSGHLSRDCTAPELPPGDIR------LCNNCYKQGHIAAECTNEKA-CNNCRKTG 151
Query: 67 HVAKDCTVKSSIICYNCNSSGHFARNCPND------------SSKR-------CYACHQA 107
H+A+DCT +S +C CN SGH AR CP +R C C++
Sbjct: 152 HLARDCT--NSPVCNLCNISGHVARECPKGRILDDNRGGRFMDERRGRFNDIICRTCNEP 209
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GH ++EC P+ L C+ CG +GH++Y+C
Sbjct: 210 GHTSREC---------TPI----LICHNCGGRGHVAYEC 235
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSAD----------ARGDKVGIVCYKCNNYGHFARECA 53
T++ C C GH CP+ D RG I+C CN GH +REC
Sbjct: 158 TNSPVCNLCNISGHVARECPKGRILDDNRGGRFMDERRGRFNDIICRTCNEPGHTSREC- 216
Query: 54 TESVTCYNCSGQGHVAKDCTVKSSII 79
T + C+NC G+GHVA +C ++
Sbjct: 217 TPILICHNCGGRGHVAYECPSGRVML 242
>gi|169617029|ref|XP_001801929.1| hypothetical protein SNOG_11691 [Phaeosphaeria nodorum SN15]
gi|111059615|gb|EAT80735.1| hypothetical protein SNOG_11691 [Phaeosphaeria nodorum SN15]
Length = 489
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 27/134 (20%)
Query: 37 IVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT------------VKSSIICYNCN 84
I+C+ C H AR+C + V C+NCS GH ++DCT +++ +CYNCN
Sbjct: 297 IICFNCREAHHIARDCLAKPV-CFNCSVAGHASRDCTEGPDELCVSKKQAQAARVCYNCN 355
Query: 85 SSGHFARNC--------PNDSSKRCYACH---QAGHMAKECPGQTAGKSPEPVVDMSL-T 132
GH A++C P D + ++ + GH+A+ C +T K+P + +
Sbjct: 356 EKGHIAKDCTAHHKGDGPEDQASAVHSLQLPWKGGHIARNCKAET--KTPSTNNERAPPV 413
Query: 133 CYVCGHQGHLSYDC 146
CY C +GHL+ DC
Sbjct: 414 CYNCTEEGHLARDC 427
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 65/152 (42%), Gaps = 51/152 (33%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC------------- 52
I C+NC + H C K VC+ C+ GH +R+C
Sbjct: 296 VIICFNCREAHHIARDCLAKP-----------VCFNCSVAGHASRDCTEGPDELCVSKKQ 344
Query: 53 ATESVTCYNCSGQGHVAKDCT--------------VKSSIICYNCNSSGHFARNC----- 93
A + CYNC+ +GH+AKDCT V S + + GH ARNC
Sbjct: 345 AQAARVCYNCNEKGHIAKDCTAHHKGDGPEDQASAVHSLQLPWK---GGHIARNCKAETK 401
Query: 94 -PNDSSKR----CYACHQAGHMAKECPGQTAG 120
P+ +++R CY C + GH+A++C AG
Sbjct: 402 TPSTNNERAPPVCYNCTEEGHLARDCSAPAAG 433
>gi|348540581|ref|XP_003457766.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 3
[Oreochromis niloticus]
Length = 137
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 70/147 (47%), Gaps = 16/147 (10%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVG--IVCYKCNNYGHFARECATESVTCYN 61
S+ +C+ C GH+ +CP +G G + CY+C GH AR+C CYN
Sbjct: 1 MSSNECFGCGHSGHWVKNCPSGGRGRGKGRGRGKDLFCYRCGELGHVARDCERTEDVCYN 60
Query: 62 CSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGK 121
C GH+A++C CY+C S GH + C +CY C + GH+A C K
Sbjct: 61 CGKAGHMARNCNHAHEQKCYSCGSFGHIQKCCE---KVKCYRCGEIGHVAVHCS-----K 112
Query: 122 SPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+ E L CY G GHL+ +C +
Sbjct: 113 ASE------LNCYNYGKSGHLAKECTI 133
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES-VTCYNCSGQG 66
+CY+C FGH Q C + + CY+C GH A C+ S + CYN G
Sbjct: 78 KCYSCGSFGHIQKCCEK------------VKCYRCGEIGHVAVHCSKASELNCYNYGKSG 125
Query: 67 HVAKDCTVKSS 77
H+AK+CT++++
Sbjct: 126 HLAKECTIEAT 136
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 45/124 (36%)
Query: 39 CYKCNNYGHFARECATE------------SVTCYNCSGQGHVAKDCTVKSSIICYNCNSS 86
C+ C + GH+ + C + + CY C GHVA+DC ++ +CYNC +
Sbjct: 6 CFGCGHSGHWVKNCPSGGRGRGKGRGRGKDLFCYRCGELGHVARDCE-RTEDVCYNCGKA 64
Query: 87 GHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GH ARNC + ++CY+ CG GH+ C
Sbjct: 65 GHMARNCNHAHEQKCYS--------------------------------CGSFGHIQKCC 92
Query: 147 KLVQ 150
+ V+
Sbjct: 93 EKVK 96
>gi|321259015|ref|XP_003194228.1| DNA-binding protein hexbp [Cryptococcus gattii WM276]
gi|317460699|gb|ADV22441.1| DNA-binding protein hexbp, putative [Cryptococcus gattii WM276]
Length = 200
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 61/145 (42%), Gaps = 34/145 (23%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV-CYKCNNYGHFARECATE------------ 55
CY C GH +CPQ A G G CY+C GH AR C
Sbjct: 51 CYTCGQEGHLSSACPQGPGAGGFGGASGGGECYRCGKPGHIARMCPESGDAAAGGFGGAG 110
Query: 56 -----------SVTCYNCSGQGHVAKDCTVKSSII----------CYNCNSSGHFARNCP 94
+ +CY C G GH++++C +S CYNC GH +R CP
Sbjct: 111 GYGYAGGAGFGNKSCYTCGGVGHISRECPSGASRGFGGGFGGPRKCYNCGQDGHISRECP 170
Query: 95 NDSSKRCYACHQAGHMAKECPGQTA 119
+ K CY+C Q GH+A CPG A
Sbjct: 171 QEQGKTCYSCGQPGHIASACPGTGA 195
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 57/136 (41%), Gaps = 21/136 (15%)
Query: 32 GDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFAR 91
G G C+KC GH A C E+ TCYNC GH++++C + CY C GH +
Sbjct: 3 GAPRGSSCFKCGQQGHVAAACPAEAPTCYNCGLSGHLSRECPQPKNKACYTCGQEGHLSS 62
Query: 92 NCPN----------DSSKRCYACHQAGHMAKECP-----------GQTAGKSPEPVVDMS 130
CP CY C + GH+A+ CP G +
Sbjct: 63 ACPQGPGAGGFGGASGGGECYRCGKPGHIARMCPESGDAAAGGFGGAGGYGYAGGAGFGN 122
Query: 131 LTCYVCGHQGHLSYDC 146
+CY CG GH+S +C
Sbjct: 123 KSCYTCGGVGHISREC 138
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 65/175 (37%), Gaps = 44/175 (25%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQGH 67
C+ C GH +CP ++ CY C GH +REC ++ CY C +GH
Sbjct: 10 CFKCGQQGHVAAACPAEAP----------TCYNCGLSGHLSRECPQPKNKACYTCGQEGH 59
Query: 68 VAKDCTVKSSII----------CYNCNSSGHFARNCPNDS-------------------- 97
++ C CY C GH AR CP
Sbjct: 60 LSSACPQGPGAGGFGGASGGGECYRCGKPGHIARMCPESGDAAAGGFGGAGGYGYAGGAG 119
Query: 98 --SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
+K CY C GH+++ECP A + CY CG GH+S +C Q
Sbjct: 120 FGNKSCYTCGGVGHISRECP-SGASRGFGGGFGGPRKCYNCGQDGHISRECPQEQ 173
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 66/181 (36%), Gaps = 63/181 (34%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-----------TESV 57
CYNC GH CPQ + CY C GH + C +
Sbjct: 30 CYNCGLSGHLSRECPQPKNK---------ACYTCGQEGHLSSACPQGPGAGGFGGASGGG 80
Query: 58 TCYNCSGQGHVAKDCTVKSSII----------------------CYNCNSSGHFARNCPN 95
CY C GH+A+ C CY C GH +R CP+
Sbjct: 81 ECYRCGKPGHIARMCPESGDAAAGGFGGAGGYGYAGGAGFGNKSCYTCGGVGHISRECPS 140
Query: 96 DSSK----------RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYD 145
+S+ +CY C Q GH+++ECP Q GK TCY CG GH++
Sbjct: 141 GASRGFGGGFGGPRKCYNCGQDGHISRECP-QEQGK----------TCYSCGQPGHIASA 189
Query: 146 C 146
C
Sbjct: 190 C 190
>gi|358057974|dbj|GAA96219.1| hypothetical protein E5Q_02883 [Mixia osmundae IAM 14324]
Length = 215
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 62/149 (41%), Gaps = 32/149 (21%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE----SVTCYNCSG 64
C+ C H SCP + +C+ C + H EC+ E S+TCYNC G
Sbjct: 12 CFRCGKDDHLAASCPSEVK----------LCFNCASPDHSLAECSEERKPMSMTCYNCQG 61
Query: 65 QGHVAKDCT----VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA- 119
QGH A DCT + +CY C GH A AC Q + P A
Sbjct: 62 QGHRAADCTEARVARPEKLCYTCGQGGHVA-----------SACDQGQTAPAKLPAPVAE 110
Query: 120 --GKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+S P D LTC+ CG GH + DC
Sbjct: 111 APSRSKAPRQDRVLTCHRCGQDGHFARDC 139
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 63/160 (39%), Gaps = 34/160 (21%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-------ATESVT 58
++ CYNC GH C +AR + +CY C GH A C A
Sbjct: 53 SMTCYNCQGQGHRAADC-----TEARVARPEKLCYTCGQGGHVASACDQGQTAPAKLPAP 107
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC----------PNDSSKRCYACHQAG 108
+ + V + C+ C GHFAR+C P+ R CH G
Sbjct: 108 VAEAPSRSKAPRQDRV---LTCHRCGQDGHFARDCSAADPISPREPSARPPRTKTCHSCG 164
Query: 109 --HMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
H+ ++CP TA P + TCY CG GHLS +C
Sbjct: 165 GAHLIRDCP--TATDRP-----AAKTCYNCGLSGHLSRNC 197
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 36/124 (29%)
Query: 9 CYNCFDFGHYQYSCPQKSSADA----------------RGDKVGIVCYKCNNYGHFAREC 52
CY C GH +C Q +A A R D+V + C++C GHFAR+C
Sbjct: 81 CYTCGQGGHVASACDQGQTAPAKLPAPVAEAPSRSKAPRQDRV-LTCHRCGQDGHFARDC 139
Query: 53 AT--------------ESVTCYNCSGQGHVAKDCTV----KSSIICYNCNSSGHFARNCP 94
+ + TC++C G H+ +DC ++ CYNC SGH +RNC
Sbjct: 140 SAADPISPREPSARPPRTKTCHSCGG-AHLIRDCPTATDRPAAKTCYNCGLSGHLSRNCS 198
Query: 95 NDSS 98
S+
Sbjct: 199 QPSA 202
>gi|443706057|gb|ELU02318.1| hypothetical protein CAPTEDRAFT_56774, partial [Capitella teleta]
Length = 110
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 52/107 (48%), Gaps = 31/107 (28%)
Query: 39 CYKCNNYGHFAREC------------ATESVTCYNCSGQGHVAKDC--------TVKSSI 78
CY CN GHF+REC + E C+NC GH A+DC S
Sbjct: 1 CYNCNEPGHFSRECPKEKRPSRPRADSPERPQCFNCHEPGHYARDCHKARRVRSRSPSPA 60
Query: 79 ICYNCNSSGHFARNCPN---------DSSKR--CYACHQAGHMAKEC 114
+CYNCN GHF+R CP DS +R C+ CH+ GH A++C
Sbjct: 61 VCYNCNEPGHFSRECPKEKRPCRPRADSPERPQCFNCHEPGHYARDC 107
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
S QC+NC + GHY C + +R VCY CN GHF+REC E C
Sbjct: 27 SPERPQCFNCHEPGHYARDCHKARRVRSRSPSPA-VCYNCNEPGHFSRECPKEKRPC--- 82
Query: 63 SGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
C+NC+ GH+AR+C
Sbjct: 83 ------RPRADSPERPQCFNCHEPGHYARDC 107
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 101 CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
CY C++ GH ++ECP + P C+ C GH + DC ++
Sbjct: 1 CYNCNEPGHFSRECPKEKRPSRPRADSPERPQCFNCHEPGHYARDCHKARR 51
>gi|331238075|ref|XP_003331693.1| hypothetical protein PGTG_12858 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309310683|gb|EFP87274.1| hypothetical protein PGTG_12858 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 169
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 62/127 (48%), Gaps = 16/127 (12%)
Query: 39 CYKCNNYGHFARECATESV-TCYNCSGQGHVAKDCTVKSSI-ICYNCNSSGHFARNCPND 96
CY C GH A C +CYNC G+GH++KDC+ ++ CY C SGH +R+C
Sbjct: 5 CYNCGGGGHLAAACPKSGTPSCYNCGGEGHISKDCSNPTAPKSCYTCGDSGHISRDCSQQ 64
Query: 97 SSKRCYACHQAGHMAKECPGQTAGKSPE------------PVVDMSLTCYVCGHQGHLSY 144
+ C+ C + GH +++CP Q G + S CY CG GHLS
Sbjct: 65 KTN-CFKCGEEGHYSRDCP-QAGGGGDQGYQSYSGGRGRGGGGGGSRNCYTCGGVGHLSR 122
Query: 145 DCKLVQK 151
DC QK
Sbjct: 123 DCVGDQK 129
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 42/172 (24%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA--TESVTCYNCSGQG 66
CYNC GH +CP+ + CY C GH +++C+ T +CY C G
Sbjct: 5 CYNCGGGGHLAAACPKSGTPS---------CYNCGGEGHISKDCSNPTAPKSCYTCGDSG 55
Query: 67 HVAKDCTVKSSIICYNCNSSGHFARNCPNDSS----------------------KRCYAC 104
H+++DC+ + C+ C GH++R+CP + CY C
Sbjct: 56 HISRDCS-QQKTNCFKCGEEGHYSRDCPQAGGGGDQGYQSYSGGRGRGGGGGGSRNCYTC 114
Query: 105 HQAGHMAKECPG--------QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
GH++++C G + S + + CY CG GH+S DC +
Sbjct: 115 GGVGHLSRDCVGDQKCFNCGEVGHVSRDCSRPQAKNCYACGQSGHISKDCSI 166
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 59/134 (44%), Gaps = 35/134 (26%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES------- 56
T+ CY C D GH C Q+ + C+KC GH++R+C
Sbjct: 43 TAPKSCYTCGDSGHISRDCSQQKTN----------CFKCGEEGHYSRDCPQAGGGGDQGY 92
Query: 57 ----------------VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR 100
CY C G GH+++DC C+NC GH +R+C +K
Sbjct: 93 QSYSGGRGRGGGGGGSRNCYTCGGVGHLSRDCVGDQK--CFNCGEVGHVSRDCSRPQAKN 150
Query: 101 CYACHQAGHMAKEC 114
CYAC Q+GH++K+C
Sbjct: 151 CYACGQSGHISKDC 164
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 12/70 (17%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQGH 67
CY C GH S D GD+ C+ C GH +R+C+ ++ CY C GH
Sbjct: 111 CYTCGGVGHL--------SRDCVGDQK---CFNCGEVGHVSRDCSRPQAKNCYACGQSGH 159
Query: 68 VAKDCTVKSS 77
++KDC++ S
Sbjct: 160 ISKDCSIPVS 169
>gi|295661570|ref|XP_002791340.1| zinc finger protein GIS2 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280902|gb|EEH36468.1| zinc finger protein GIS2 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 222
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 68/157 (43%), Gaps = 24/157 (15%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---- 58
+T T QCY+C GH Q CP + G CY CN GH AR C + +
Sbjct: 38 TTETKQCYHCQGLGHVQADCP---TLRLNGGATSGRCYNCNILGHLARNCPSTGMQGAGR 94
Query: 59 -------CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQA--GH 109
+N +G A + CY C HFAR+C S K CYAC + GH
Sbjct: 95 GVPSARGVFNSPFRGAFAG---YARTATCYKCGGPNHFARDCQAQSMK-CYACGKLMQGH 150
Query: 110 MAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++++C G P+ + CY C GH+S DC
Sbjct: 151 ISRDCTAPNGG----PLSSVGKVCYKCSQAGHISRDC 183
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 28/120 (23%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADA---------------RGDKVG----IVCYKCNNYGHF 48
+CYNC GH +CP A RG G CYKC HF
Sbjct: 70 RCYNCNILGHLARNCPSTGMQGAGRGVPSARGVFNSPFRGAFAGYARTATCYKCGGPNHF 129
Query: 49 ARECATESVTCYNCSG--QGHVAKDCTVK-----SSI--ICYNCNSSGHFARNCPNDSSK 99
AR+C +S+ CY C QGH+++DCT SS+ +CY C+ +GH +R+CP ++++
Sbjct: 130 ARDCQAQSMKCYACGKLMQGHISRDCTAPNGGPLSSVGKVCYKCSQAGHISRDCPTNTTE 189
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 61/161 (37%), Gaps = 64/161 (39%)
Query: 38 VCYKCNNYGHFA----------------RECATESVTCYNCSGQGHVAKDCTV------K 75
CYKC N GH+A R TE+ CY+C G GHV DC
Sbjct: 7 ACYKCGNIGHYAGYQTNDQLGHESNGCPRPRTTETKQCYHCQGLGHVQADCPTLRLNGGA 66
Query: 76 SSIICYNCNSSGHFARNCPNDS----------------------------SKRCYACHQA 107
+S CYNCN GH ARNCP+ + CY C
Sbjct: 67 TSGRCYNCNILGHLARNCPSTGMQGAGRGVPSARGVFNSPFRGAFAGYARTATCYKCGGP 126
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLTCYVCGH--QGHLSYDC 146
H A++C Q S+ CY CG QGH+S DC
Sbjct: 127 NHFARDCQAQ------------SMKCYACGKLMQGHISRDC 155
>gi|296082874|emb|CBI22175.3| unnamed protein product [Vitis vinifera]
Length = 535
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 29 DARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGH 88
D+R + +C KC GHFAR+C +V C NC GH+A +C S+ IC+NC S H
Sbjct: 31 DSRVHRQDYLCNKCKRPGHFARDCPNVTV-CNNCGLPGHIAAECN--STTICWNCKESRH 87
Query: 89 FARNCPNDSSKRCYACHQAGHMAKE--CPGQTA 119
A CPND C+ C + GH+A++ CPG A
Sbjct: 88 LASQCPNDPV--CHMCGKMGHLARDCSCPGLLA 118
>gi|315044853|ref|XP_003171802.1| hypothetical protein MGYG_06345 [Arthroderma gypseum CBS 118893]
gi|311344145|gb|EFR03348.1| hypothetical protein MGYG_06345 [Arthroderma gypseum CBS 118893]
Length = 192
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 64/147 (43%), Gaps = 31/147 (21%)
Query: 36 GIVCYKCNNYGHFARECATESV-TCYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARNC 93
G C+ C H AR+C + TCYNC GQGHV+++CT CY C +GH +R C
Sbjct: 7 GRGCFNCGESSHQARDCPKKGTPTCYNCGGQGHVSRECTQPPKEKSCYRCGMTGHISREC 66
Query: 94 PNDSS----------------KRCYACHQAGHMAKECPGQ-------------TAGKSPE 124
P+ S + CY C Q GH+A+ C Q +
Sbjct: 67 PSSGSGDNNYSGGGYSGGSGGQECYKCGQVGHIARNCSQQGGSGYGGGYGNSGSGSYGGG 126
Query: 125 PVVDMSLTCYVCGHQGHLSYDCKLVQK 151
S TCY CG GH++ DC QK
Sbjct: 127 SYGGRSQTCYSCGGYGHMARDCTQGQK 153
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 60/141 (42%), Gaps = 36/141 (25%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV-------CYKCNNYGHFARECATE------ 55
CY C GH CP S D G CYKC GH AR C+ +
Sbjct: 53 CYRCGMTGHISRECPSSGSGDNNYSGGGYSGGSGGQECYKCGQVGHIARNCSQQGGSGYG 112
Query: 56 -------------------SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND 96
S TCY+C G GH+A+DCT CYNC GH +R+CP +
Sbjct: 113 GGYGNSGSGSYGGGSYGGRSQTCYSCGGYGHMARDCT--QGQKCYNCGEVGHVSRDCPTE 170
Query: 97 S--SKRCYACHQAGHMAKECP 115
+ + CY C QAGH+ CP
Sbjct: 171 AKGERVCYKCKQAGHVQAACP 191
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 71/190 (37%), Gaps = 64/190 (33%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA--TESVTCYN 61
+S C+NC + H CP+K + CY C GH +REC + +CY
Sbjct: 5 SSGRGCFNCGESSHQARDCPKKGTP---------TCYNCGGQGHVSRECTQPPKEKSCYR 55
Query: 62 CSGQGHVAKDCTVKSS----------------IICYNCNSSGHFARNCPNDS-------- 97
C GH++++C S CY C GH ARNC
Sbjct: 56 CGMTGHISRECPSSGSGDNNYSGGGYSGGSGGQECYKCGQVGHIARNCSQQGGSGYGGGY 115
Query: 98 ----------------SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGH 141
S+ CY+C GHMA++C T G+ CY CG GH
Sbjct: 116 GNSGSGSYGGGSYGGRSQTCYSCGGYGHMARDC---TQGQK----------CYNCGEVGH 162
Query: 142 LSYDCKLVQK 151
+S DC K
Sbjct: 163 VSRDCPTEAK 172
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 46/105 (43%), Gaps = 18/105 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGI---------------VCYKCNNYGHFAREC 52
+CY C GH +C Q+ + G CY C YGH AR+C
Sbjct: 89 ECYKCGQVGHIARNCSQQGGSGYGGGYGNSGSGSYGGGSYGGRSQTCYSCGGYGHMARDC 148
Query: 53 ATESVTCYNCSGQGHVAKDC--TVKSSIICYNCNSSGHFARNCPN 95
T+ CYNC GHV++DC K +CY C +GH CPN
Sbjct: 149 -TQGQKCYNCGEVGHVSRDCPTEAKGERVCYKCKQAGHVQAACPN 192
>gi|99907739|gb|ABF68760.1| CNBP mutant 36-163, partial [synthetic construct]
Length = 128
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 64/146 (43%), Gaps = 28/146 (19%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT----ESVTCYNC 62
+ CY C + GH C Q A CY C+ H +R+C CYNC
Sbjct: 3 LFCYRCGEQGHIARDCEQTEDA----------CYNCHRSXHISRDCKEPKKEREQCCYNC 52
Query: 63 SGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKS 122
GHVA+DC + CY+C GHF + C +CY C + GH+A +C T
Sbjct: 53 GKAGHVARDCDHANEQKCYSCGGFGHFQKLC---DKVKCYRCGEIGHVAVQCSKAT---- 105
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDCKL 148
+ CY CG GHL+ DC +
Sbjct: 106 -------EVNCYNCGKTGHLARDCSI 124
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH C + CY C +GHF + C + V CY C GHV
Sbjct: 49 CYNCGKAGHVARDCDHANEQK---------CYSCGGFGHFQKLC--DKVKCYRCGEIGHV 97
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
A C+ + + CYNC +GH AR+C ++S
Sbjct: 98 AVQCSKATEVNCYNCGKTGHLARDCSIEAS 127
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 15/99 (15%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMA 111
+ + CY C QGH+A+DC ++ CYNC+ S H +R+C +R CY C +AGH+A
Sbjct: 1 KDLFCYRCGEQGHIARDCE-QTEDACYNCHRSXHISRDCKEPKKEREQCCYNCGKAGHVA 59
Query: 112 KECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
++C K CY CG GH C V+
Sbjct: 60 RDCDHANEQK-----------CYSCGGFGHFQKLCDKVK 87
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 15/72 (20%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQ 65
+CY+C FGH+Q C + + CY+C GH A +C ATE V CYNC
Sbjct: 69 KCYSCGGFGHFQKLCDK------------VKCYRCGEIGHVAVQCSKATE-VNCYNCGKT 115
Query: 66 GHVAKDCTVKSS 77
GH+A+DC++++S
Sbjct: 116 GHLARDCSIEAS 127
>gi|320590859|gb|EFX03302.1| zinc knuckle domain containing protein [Grosmannia clavigera
kw1407]
Length = 190
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 62/144 (43%), Gaps = 36/144 (25%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT---------- 54
T CY C GH CPQ + G CYKC GH AR C
Sbjct: 48 ETKTCYRCGQAGHISRDCPQSAGPGGS-GPSGAECYKCGEVGHIARNCPKGGFGGNPSGG 106
Query: 55 --------------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
++ TCY+C G GH+++DC S CYNC +GHF+R+CP
Sbjct: 107 AGGYGNSYGGGGGGGGYGGNQNKTCYSCGGVGHMSRDCVNGSK--CYNCGETGHFSRDCP 164
Query: 95 NDSS---KRCYACHQAGHMAKECP 115
S+ K CY C Q GH+ +CP
Sbjct: 165 KASTSGEKICYKCQQPGHIQADCP 188
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 62/140 (44%), Gaps = 29/140 (20%)
Query: 36 GIVCYKCNNYGHFARECATE-SVTCYNCSGQGHVAKDCT--VKSSIICYNCNSSGHFARN 92
G C+ C H AR+C + CYNC G+GH+++DC K + CY C +GH +R+
Sbjct: 5 GRACFSCGATTHQARDCPNRGAAKCYNCGGEGHMSRDCPEGPKETKTCYRCGQAGHISRD 64
Query: 93 CPNDSSK--------RCYACHQAGHMAKECP------------------GQTAGKSPEPV 126
CP + CY C + GH+A+ CP G
Sbjct: 65 CPQSAGPGGSGPSGAECYKCGEVGHIARNCPKGGFGGNPSGGAGGYGNSYGGGGGGGGYG 124
Query: 127 VDMSLTCYVCGHQGHLSYDC 146
+ + TCY CG GH+S DC
Sbjct: 125 GNQNKTCYSCGGVGHMSRDC 144
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN--DSSKRCYACHQAGHMAK 112
+ C++C H A+DC + + CYNC GH +R+CP +K CY C QAGH+++
Sbjct: 4 QGRACFSCGATTHQARDCPNRGAAKCYNCGGEGHMSRDCPEGPKETKTCYRCGQAGHISR 63
Query: 113 ECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+CP CY CG GH++ +C
Sbjct: 64 DCPQSAGPGG---SGPSGAECYKCGEVGHIARNC 94
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 69/177 (38%), Gaps = 55/177 (31%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA---------TESVT 58
+CYNC GH CP+ G K CY+C GH +R+C
Sbjct: 28 KCYNCGGEGHMSRDCPE-------GPKETKTCYRCGQAGHISRDCPQSAGPGGSGPSGAE 80
Query: 59 CYNCSGQGHVAKDCT-----------------------------VKSSIICYNCNSSGHF 89
CY C GH+A++C + CY+C GH
Sbjct: 81 CYKCGEVGHIARNCPKGGFGGNPSGGAGGYGNSYGGGGGGGGYGGNQNKTCYSCGGVGHM 140
Query: 90 ARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+R+C N S +CY C + GH +++CP A S E + CY C GH+ DC
Sbjct: 141 SRDCVNGS--KCYNCGETGHFSRDCP--KASTSGEKI------CYKCQQPGHIQADC 187
>gi|147854282|emb|CAN79118.1| hypothetical protein VITISV_005773 [Vitis vinifera]
Length = 1368
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 29 DARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGH 88
D+R + +C KC GHFAR+C +V C NC GH+A +C S+ IC+NC S H
Sbjct: 878 DSRVHRQDYLCNKCKRPGHFARDCPNVTV-CNNCGLPGHIAAECN--STTICWNCKESRH 934
Query: 89 FARNCPNDSSKRCYACHQAGHMAKEC 114
A CPND C+ C + GH+A++C
Sbjct: 935 LASQCPNDPV--CHMCGKMGHLARDC 958
>gi|67423403|dbj|BAD99522.1| VASA RNA helicase [Daphnia magna]
Length = 775
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 23/145 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA------TESVTCYNC 62
C+ C + GH+ CPQ G + C+KC GHF+REC S C+ C
Sbjct: 167 CHKCGEEGHFSRECPQAGGGGGSGPRT---CHKCGEEGHFSRECPQGGGGGGGSRACHKC 223
Query: 63 SGQGHVAKDC------TVKSSIICYNCNSSGHFARNCPNDS---SKRCYACHQAGHMAKE 113
+GH +++C C+ C GH +R+CP +C+ CH+AGH +K+
Sbjct: 224 GEEGHFSRECPQGGGGGGSGPRTCHKCGEEGHVSRDCPQGGGGGDSKCFKCHEAGHTSKD 283
Query: 114 CPGQTA-----GKSPEPVVDMSLTC 133
CP + GK E + ++TC
Sbjct: 284 CPNPFSELTEDGKPREQYIPEAVTC 308
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 22/128 (17%)
Query: 36 GIVCYKCNNYGHFARECA------TESVTCYNCSGQGHVAKDC------TVKSSIICYNC 83
G C+KC GH AREC S C+ C +GH +++C C+ C
Sbjct: 138 GRPCHKCGEEGHMARECPKGGGGGGGSRACHKCGEEGHFSRECPQAGGGGGSGPRTCHKC 197
Query: 84 NSSGHFARNCPNDS-----SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGH 138
GHF+R CP S+ C+ C + GH ++ECP G P TC+ CG
Sbjct: 198 GEEGHFSRECPQGGGGGGGSRACHKCGEEGHFSRECPQGGGGGGSGP-----RTCHKCGE 252
Query: 139 QGHLSYDC 146
+GH+S DC
Sbjct: 253 EGHVSRDC 260
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 66/157 (42%), Gaps = 32/157 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-------TCYN 61
C+ C + GH CP+ C+KC GHF+REC TC+
Sbjct: 141 CHKCGEEGHMARECPKGGGGGGGSR----ACHKCGEEGHFSRECPQAGGGGGSGPRTCHK 196
Query: 62 CSGQGHVAKDC-----TVKSSIICYNCNSSGHFARNCPNDS------SKRCYACHQAGHM 110
C +GH +++C S C+ C GHF+R CP + C+ C + GH+
Sbjct: 197 CGEEGHFSRECPQGGGGGGGSRACHKCGEEGHFSRECPQGGGGGGSGPRTCHKCGEEGHV 256
Query: 111 AKECP-GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+++CP G G S C+ C GH S DC
Sbjct: 257 SRDCPQGGGGGDS---------KCFKCHEAGHTSKDC 284
>gi|405120721|gb|AFR95491.1| DNA-binding protein hexbp [Cryptococcus neoformans var. grubii H99]
Length = 201
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 61/146 (41%), Gaps = 35/146 (23%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV-CYKCNNYGHFARECATE------------ 55
CY C GH +CPQ A G G CY+C GH AR C
Sbjct: 51 CYTCGQEGHLSSACPQGPGAGGFGGASGGGECYRCGKPGHIARMCPESGDAAAGGFGGAG 110
Query: 56 ------------SVTCYNCSGQGHVAKDCTVKSSII----------CYNCNSSGHFARNC 93
+ +CY C G GH++++C +S CYNC GH +R C
Sbjct: 111 GYGGYGGGAGFGNKSCYTCGGVGHISRECPSGASRGFGGGFGGPRKCYNCGQDGHISREC 170
Query: 94 PNDSSKRCYACHQAGHMAKECPGQTA 119
P + K CY+C Q GH+A CPG A
Sbjct: 171 PQEQGKTCYSCGQPGHIASACPGTGA 196
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 57/137 (41%), Gaps = 22/137 (16%)
Query: 32 GDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFAR 91
G G C+KC GH A C E+ TCYNC GH++++C + CY C GH +
Sbjct: 3 GAPRGSSCFKCGQQGHVAAACPAEAPTCYNCGLSGHLSRECPQPKNKACYTCGQEGHLSS 62
Query: 92 NCPN----------DSSKRCYACHQAGHMAKECP------------GQTAGKSPEPVVDM 129
CP CY C + GH+A+ CP G
Sbjct: 63 ACPQGPGAGGFGGASGGGECYRCGKPGHIARMCPESGDAAAGGFGGAGGYGGYGGGAGFG 122
Query: 130 SLTCYVCGHQGHLSYDC 146
+ +CY CG GH+S +C
Sbjct: 123 NKSCYTCGGVGHISREC 139
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 65/176 (36%), Gaps = 45/176 (25%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQGH 67
C+ C GH +CP ++ CY C GH +REC ++ CY C +GH
Sbjct: 10 CFKCGQQGHVAAACPAEAP----------TCYNCGLSGHLSRECPQPKNKACYTCGQEGH 59
Query: 68 VAKDCTVKSSII----------CYNCNSSGHFARNCPNDS-------------------- 97
++ C CY C GH AR CP
Sbjct: 60 LSSACPQGPGAGGFGGASGGGECYRCGKPGHIARMCPESGDAAAGGFGGAGGYGGYGGGA 119
Query: 98 ---SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
+K CY C GH+++ECP A + CY CG GH+S +C Q
Sbjct: 120 GFGNKSCYTCGGVGHISRECP-SGASRGFGGGFGGPRKCYNCGQDGHISRECPQEQ 174
>gi|452982803|gb|EME82561.1| hypothetical protein MYCFIDRAFT_111837, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 191
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 69/156 (44%), Gaps = 20/156 (12%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQ-KSSADARGDKVGIVCYKCNNYGHFARECATESVT--- 58
+T T QCY+C GH Q CP + S A+G G CY C GH AR C T + +
Sbjct: 44 TTETKQCYHCQGLGHVQADCPTLRLSGGAQG---GGRCYSCGQAGHLARNCPTPNASPTG 100
Query: 59 --------CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
G G + CY C HFAR+C + K CYAC + GH+
Sbjct: 101 AGRGAGGPARGGYGGGFRGGFAGNNRAATCYKCGGPNHFARDCQAQAMK-CYACGKLGHI 159
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+++C G + TCY CG GH+S DC
Sbjct: 160 SRDCTSPNGGS----LNSAGKTCYRCGETGHISRDC 191
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 34/142 (23%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + +C + CY+C GH +CP
Sbjct: 5 ACYKCGNVGHYAEVCSSSERLCYNCKQPGHESNNCPHPRTTETKQCYHCQGLGHVQADCP 64
Query: 95 N-------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVV-------------------- 127
RCY+C QAGH+A+ CP T SP
Sbjct: 65 TLRLSGGAQGGGRCYSCGQAGHLARNCP--TPNASPTGAGRGAGGPARGGYGGGFRGGFA 122
Query: 128 --DMSLTCYVCGHQGHLSYDCK 147
+ + TCY CG H + DC+
Sbjct: 123 GNNRAATCYKCGGPNHFARDCQ 144
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S CY C + GH+A C + S + CY C Q GH + CP P + CY
Sbjct: 2 SRRACYKCGNVGHYAEVC-SSSERLCYNCKQPGHESNNCP--------HPRTTETKQCYH 52
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ DC ++ S
Sbjct: 53 CQGLGHVQADCPTLRLS 69
>gi|388851985|emb|CCF54341.1| related to GIS2-Putative zinc finger protein, proposed to be
involved in the RAS/cAMP signaling pathway [Ustilago
hordei]
Length = 205
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 69/161 (42%), Gaps = 32/161 (19%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA--------- 53
+T T QCY C GH + CP ++ G VG CY C GH AR+C
Sbjct: 45 TTETKQCYGCGGKGHIKADCPALAANGGAGAAVGKACYTCGKPGHMARDCGKPAAARGGP 104
Query: 54 TESVTCYNCSGQGHVAKDCTVKSSI------------ICYNCNSSGHFARNCP----NDS 97
V C C+G H+AKDC + CY C GH +CP N
Sbjct: 105 AGGVRCRRCNGPNHLAKDCLAPAPASAGGAAASGGAKACYGCGGKGHLKADCPTLNANAG 164
Query: 98 SKRCYACHQAGHMAKEC------PGQTAGKSPEPVVDMSLT 132
K CY+C Q GH+A++C PG T ++P +LT
Sbjct: 165 PKTCYSCQQVGHIARDCSQAQVEPG-TMAEAPGTNATAALT 204
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 54/153 (35%), Gaps = 42/153 (27%)
Query: 39 CYKCNNYGHFARECA------------------------TESVTCYNCSGQGHVAKDC-- 72
CY C GH A C+ TE+ CY C G+GH+ DC
Sbjct: 7 CYVCGQLGHLAENCSFTERRCFNCLEPGHESSACEAPRTTETKQCYGCGGKGHIKADCPA 66
Query: 73 -------TVKSSIICYNCNSSGHFARNCPNDSSK--------RCYACHQAGHMAKECPGQ 117
CY C GH AR+C ++ RC C+ H+AK+C
Sbjct: 67 LAANGGAGAAVGKACYTCGKPGHMARDCGKPAAARGGPAGGVRCRRCNGPNHLAKDCLAP 126
Query: 118 TAGKSPEPVVDMSL-TCYVCGHQGHLSYDCKLV 149
+ CY CG +GHL DC +
Sbjct: 127 APASAGGAAASGGAKACYGCGGKGHLKADCPTL 159
>gi|255634164|gb|ACU17445.1| unknown [Glycine max]
Length = 124
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 31 RGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFA 90
RG +C C GH+AREC ++ C+NC GH+A +CT KS +C+NC GH A
Sbjct: 37 RGFSRDNLCKNCKRPGHYARECPNVAI-CHNCGLPGHIASECTTKS--LCWNCKEPGHMA 93
Query: 91 RNCPNDSSKRCYACHQAGHMAKEC 114
+CPN+ C+ C +AGH A+EC
Sbjct: 94 SSCPNEGI--CHTCGKAGHRAREC 115
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 14/85 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NC GHY CP + +C+ C GH A EC T+S+ C+NC GH+
Sbjct: 45 CKNCKRPGHYARECPNVA-----------ICHNCGLPGHIASECTTKSL-CWNCKEPGHM 92
Query: 69 AKDCTVKSSIICYNCNSSGHFARNC 93
A C + IC+ C +GH AR C
Sbjct: 93 ASSCPNEG--ICHTCGKAGHRAREC 115
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 17/107 (15%)
Query: 40 YKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK 99
Y+ Y +R + C NC GH A++C + IC+NC GH A C S
Sbjct: 26 YRDAPYRRDSRRGFSRDNLCKNCKRPGHYARECP--NVAICHNCGLPGHIASECTTKSL- 82
Query: 100 RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C+ C + GHMA CP + C+ CG GH + +C
Sbjct: 83 -CWNCKEPGHMASSCPNEG-------------ICHTCGKAGHRAREC 115
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 12/66 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+NC GH C KS +C+ C GH A C E + C+ C GH
Sbjct: 64 CHNCGLPGHIASECTTKS-----------LCWNCKEPGHMASSCPNEGI-CHTCGKAGHR 111
Query: 69 AKDCTV 74
A++C+
Sbjct: 112 ARECSA 117
>gi|115385941|ref|XP_001209517.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114187964|gb|EAU29664.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 184
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGI-VCYKCNNYGHFARECA-------------- 53
CY C GH CPQ + G G CYKC GH AR C
Sbjct: 62 CYRCGTTGHISRECPQAAGEGYGGGAPGGQECYKCGRVGHIARNCPQGGSYGGGFGGGYG 121
Query: 54 TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS--SKRCYACHQAGHMA 111
TCY+C G GH+A+DCT CYNC GH +R+CP ++ + CY C Q GH+
Sbjct: 122 GRQQTCYSCGGFGHMARDCTHGQK--CYNCGEVGHVSRDCPTEAKGERVCYNCKQPGHVQ 179
Query: 112 KECP 115
CP
Sbjct: 180 AACP 183
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGI----VCYKCNNYGHFARECATESVTCYNCS 63
+CY C GH +CPQ S CY C +GH AR+C T CYNC
Sbjct: 92 ECYKCGRVGHIARNCPQGGSYGGGFGGGYGGRQQTCYSCGGFGHMARDC-THGQKCYNCG 150
Query: 64 GQGHVAKDCTV--KSSIICYNCNSSGHFARNCPN 95
GHV++DC K +CYNC GH CPN
Sbjct: 151 EVGHVSRDCPTEAKGERVCYNCKQPGHVQAACPN 184
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 35/132 (26%)
Query: 39 CYKCNNYGHFARECATESV-----------TCYNCSGQGHVAKDCT-------------V 74
CY+C GH +REC + CY C GH+A++C
Sbjct: 62 CYRCGTTGHISRECPQAAGEGYGGGAPGGQECYKCGRVGHIARNCPQGGSYGGGFGGGYG 121
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
CY+C GH AR+C ++CY C + GH++++CP + G+ CY
Sbjct: 122 GRQQTCYSCGGFGHMARDC--THGQKCYNCGEVGHVSRDCPTEAKGER---------VCY 170
Query: 135 VCGHQGHLSYDC 146
C GH+ C
Sbjct: 171 NCKQPGHVQAAC 182
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 53/128 (41%), Gaps = 38/128 (29%)
Query: 50 REC--ATESVTCYNCSGQGHVAKDCTVKSSII----------CYNCNSSGHFARNCPN-- 95
REC A + +CY C GH++++C + CY C GH ARNCP
Sbjct: 51 RECTVAPKEKSCYRCGTTGHISRECPQAAGEGYGGGAPGGQECYKCGRVGHIARNCPQGG 110
Query: 96 -----------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSY 144
+ CY+C GHMA++C T G+ CY CG GH+S
Sbjct: 111 SYGGGFGGGYGGRQQTCYSCGGFGHMARDC---THGQK----------CYNCGEVGHVSR 157
Query: 145 DCKLVQKS 152
DC K
Sbjct: 158 DCPTEAKG 165
>gi|440470333|gb|ELQ39408.1| zinc finger protein GIS2 [Magnaporthe oryzae Y34]
Length = 230
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 72/186 (38%), Gaps = 62/186 (33%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TES 56
MSS S CY C + GHY C SSA+ +CY C GH + C TE+
Sbjct: 1 MSSLSRRACYKCGNVGHYAEVC---SSAER-------LCYNCKQPGHESNGCPLPRTTEA 50
Query: 57 VTCYNCSGQGHVAKDCTV------KSSIICYNCNSSGHFARNCPNDSSKR---------- 100
CY+C G GHV DC S+ CY+C GH AR CPN +
Sbjct: 51 KQCYHCQGLGHVQADCPTLRLSGAGSNGRCYSCGQPGHLARACPNPNGANMGRGAPVPRG 110
Query: 101 --------------------CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQG 140
CY C H A++C Q ++ CY CG G
Sbjct: 111 GYDGGYGGRGGFAGGARPATCYKCGGPNHFARDCQAQ------------AMKCYACGKLG 158
Query: 141 HLSYDC 146
H+S DC
Sbjct: 159 HISRDC 164
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 62/138 (44%), Gaps = 28/138 (20%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + + CY+C GH +CP
Sbjct: 8 ACYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQADCP 67
Query: 95 N------DSSKRCYACHQAGHMAKECP---GQTAGK-SPEP---------------VVDM 129
S+ RCY+C Q GH+A+ CP G G+ +P P
Sbjct: 68 TLRLSGAGSNGRCYSCGQPGHLARACPNPNGANMGRGAPVPRGGYDGGYGGRGGFAGGAR 127
Query: 130 SLTCYVCGHQGHLSYDCK 147
TCY CG H + DC+
Sbjct: 128 PATCYKCGGPNHFARDCQ 145
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
Query: 3 STSTIQCYNCFDFGHYQYSCP--QKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
+T QCY+C GH Q CP + S A + G CY C GH AR C
Sbjct: 47 TTEAKQCYHCQGLGHVQADCPTLRLSGAGSNGR-----CYSCGQPGHLARACPNP----- 96
Query: 61 NCSGQGHVAK---------------DCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACH 105
N + G A CY C HFAR+C + +CYAC
Sbjct: 97 NGANMGRGAPVPRGGYDGGYGGRGGFAGGARPATCYKCGGPNHFARDC-QAQAMKCYACG 155
Query: 106 QAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ GH++++C G P+ + TCY CG GH+S C
Sbjct: 156 KLGHISRDCTAPNGG----PLNTVGKTCYQCGEAGHISRQC 192
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S CY C + GH+A C + + + CY C Q GH + CP P + CY
Sbjct: 5 SRRACYKCGNVGHYAEVC-SSAERLCYNCKQPGHESNGCP--------LPRTTEAKQCYH 55
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ DC ++ S
Sbjct: 56 CQGLGHVQADCPTLRLS 72
>gi|389626373|ref|XP_003710840.1| zinc finger protein GIS2 [Magnaporthe oryzae 70-15]
gi|351650369|gb|EHA58228.1| zinc finger protein GIS2 [Magnaporthe oryzae 70-15]
gi|440480347|gb|ELQ61019.1| zinc finger protein GIS2 [Magnaporthe oryzae P131]
Length = 230
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 72/186 (38%), Gaps = 62/186 (33%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TES 56
MSS S CY C + GHY C SSA+ +CY C GH + C TE+
Sbjct: 1 MSSLSRRACYKCGNVGHYAEVC---SSAER-------LCYNCKQPGHESNGCPLPRTTEA 50
Query: 57 VTCYNCSGQGHVAKDCTV------KSSIICYNCNSSGHFARNCPNDSSKR---------- 100
CY+C G GHV DC S+ CY+C GH AR CPN +
Sbjct: 51 KQCYHCQGLGHVQADCPTLRLSGAGSNGRCYSCGQPGHLARACPNPNGANMGRGAPVPRG 110
Query: 101 --------------------CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQG 140
CY C H A++C Q ++ CY CG G
Sbjct: 111 GYGGGYGGRGGFAGGARPATCYKCGGPNHFARDCQAQ------------AMKCYACGKLG 158
Query: 141 HLSYDC 146
H+S DC
Sbjct: 159 HISRDC 164
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 62/138 (44%), Gaps = 28/138 (20%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
CYKC N GH+A C++ CYNC GH + C + + CY+C GH +CP
Sbjct: 8 ACYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQADCP 67
Query: 95 N------DSSKRCYACHQAGHMAKECP---GQTAGK-SPEP---------------VVDM 129
S+ RCY+C Q GH+A+ CP G G+ +P P
Sbjct: 68 TLRLSGAGSNGRCYSCGQPGHLARACPNPNGANMGRGAPVPRGGYGGGYGGRGGFAGGAR 127
Query: 130 SLTCYVCGHQGHLSYDCK 147
TCY CG H + DC+
Sbjct: 128 PATCYKCGGPNHFARDCQ 145
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
Query: 3 STSTIQCYNCFDFGHYQYSCP--QKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
+T QCY+C GH Q CP + S A + G CY C GH AR C
Sbjct: 47 TTEAKQCYHCQGLGHVQADCPTLRLSGAGSNGR-----CYSCGQPGHLARACPNP----- 96
Query: 61 NCSGQGHVAK---------------DCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACH 105
N + G A CY C HFAR+C + +CYAC
Sbjct: 97 NGANMGRGAPVPRGGYGGGYGGRGGFAGGARPATCYKCGGPNHFARDC-QAQAMKCYACG 155
Query: 106 QAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ GH++++C G P+ + TCY CG GH+S C
Sbjct: 156 KLGHISRDCTAPNGG----PLNTVGKTCYQCGEAGHISRQC 192
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S CY C + GH+A C + + + CY C Q GH + CP P + CY
Sbjct: 5 SRRACYKCGNVGHYAEVC-SSAERLCYNCKQPGHESNGCP--------LPRTTEAKQCYH 55
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ DC ++ S
Sbjct: 56 CQGLGHVQADCPTLRLS 72
>gi|321257884|ref|XP_003193740.1| hypothetical protein CGB_D6640W [Cryptococcus gattii WM276]
gi|317460210|gb|ADV21953.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 247
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 62/147 (42%), Gaps = 47/147 (31%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------ESVTCYNC 62
CYNC + GH +CPQ S D G CY C GH +C + C+ C
Sbjct: 97 CYNCREPGHESTNCPQPRSTD------GKQCYACGGVGHVKSDCPSMRGAFGPGQKCFKC 150
Query: 63 SGQGHVAKDCTVK----------------------------SSIICYNCNSSGHFARNC- 93
GH+A++CTV + + CY CN H AR+C
Sbjct: 151 GRPGHLARECTVPGFVGAFRGRGGFGGAFGGRPRPPVNPDGTPVKCYRCNGENHLARDCL 210
Query: 94 -PND-----SSKRCYACHQAGHMAKEC 114
P D +SK+CY C + GH+A++C
Sbjct: 211 APRDEAAILASKKCYKCQETGHIARDC 237
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS---KRCYACHQAGHMAKECPGQTAGKS 122
GH+A++C + CYNC GH + NCP S K+CYAC GH+ +CP
Sbjct: 84 GHIAENCQAPGRL-CYNCREPGHESTNCPQPRSTDGKQCYACGGVGHVKSDCPSMRGAFG 142
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDCKL 148
P C+ CG GHL+ +C +
Sbjct: 143 P------GQKCFKCGRPGHLARECTV 162
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 55/131 (41%), Gaps = 25/131 (19%)
Query: 41 KCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCPN-- 95
+ + GH A C CYNC GH + +C S CY C GH +CP+
Sbjct: 79 RVASIGHIAENCQAPGRLCYNCREPGHESTNCPQPRSTDGKQCYACGGVGHVKSDCPSMR 138
Query: 96 ---DSSKRCYACHQAGHMAKEC--PG------------QTAGKSPEPVVD---MSLTCYV 135
++C+ C + GH+A+EC PG G P P V+ + CY
Sbjct: 139 GAFGPGQKCFKCGRPGHLARECTVPGFVGAFRGRGGFGGAFGGRPRPPVNPDGTPVKCYR 198
Query: 136 CGHQGHLSYDC 146
C + HL+ DC
Sbjct: 199 CNGENHLARDC 209
>gi|169616856|ref|XP_001801843.1| hypothetical protein SNOG_11604 [Phaeosphaeria nodorum SN15]
gi|111060192|gb|EAT81312.1| hypothetical protein SNOG_11604 [Phaeosphaeria nodorum SN15]
Length = 222
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 82/211 (38%), Gaps = 74/211 (35%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATES 56
MSS S C+ C + GHY C S+ R +CY C GH + C TE+
Sbjct: 1 MSSLSRRACFKCGNIGHYAEVC----SSSER------LCYNCKQPGHESNGCPHPRTTET 50
Query: 57 VTCYNCSGQGHVAKDCTV------KSSIICYNCNSSGHFARNCPNDS------------- 97
CY+C G GHV DC +S CY+C +GH ARNCPN
Sbjct: 51 KQCYHCQGLGHVQADCPTLRLSGAGTSGRCYSCGLAGHLARNCPNPGMQGAGRGAGGPPA 110
Query: 98 --------------------------------------SKRCYACHQAGHMAKECPGQTA 119
+ +CYAC + GH++++C +
Sbjct: 111 RGGFGGFRGGFQGQGGARAATCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAASG 170
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
G + ++ TCY CG GH+S +C +
Sbjct: 171 GPN---GLEAGKTCYRCGETGHISRNCAQAE 198
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S C+ C + GH+A C + S + CY C Q GH + CP P + CY
Sbjct: 5 SRRACFKCGNIGHYAEVC-SSSERLCYNCKQPGHESNGCP--------HPRTTETKQCYH 55
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ DC ++ S
Sbjct: 56 CQGLGHVQADCPTLRLS 72
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV 57
++CY C GH C +S G + G CY+C GH +R CA V
Sbjct: 149 AMKCYACGKLGHISRDC-TAASGGPNGLEAGKTCYRCGETGHISRNCAQAEV 199
>gi|189195318|ref|XP_001933997.1| cellular nucleic acid binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979876|gb|EDU46502.1| cellular nucleic acid binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 189
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 64/137 (46%), Gaps = 25/137 (18%)
Query: 39 CYKCNNYGHFARECATESV-TCYNCSGQGHVAKDCTV-KSSIICYNCNSSGHFARNCPND 96
CY C + H A EC T+ TCYNC +GHV+++CT ++ CY C +GH +R C D
Sbjct: 15 CYNCGDSSHRAAECPTKGTPTCYNCGEKGHVSRECTSPQAEKTCYRCGGTGHISRECTKD 74
Query: 97 ----------SSKRCYACHQAGHMAKECPGQTAG------------KSPEPVVDMSLTCY 134
S+ CY C Q GH+A+ C Q G + TCY
Sbjct: 75 GGAPMGGRGGGSQECYKCGQVGHIARNCS-QGGGYSAGSRGGYGGGAAGGYGGARQTTCY 133
Query: 135 VCGHQGHLSYDCKLVQK 151
CG GH+S DC QK
Sbjct: 134 SCGGFGHMSRDCTQGQK 150
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 67/172 (38%), Gaps = 56/172 (32%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV--TCYNCSGQG 66
CYNC D H CP K + CY C GH +REC + TCY C G G
Sbjct: 15 CYNCGDSSHRAAECPTKGTP---------TCYNCGEKGHVSRECTSPQAEKTCYRCGGTG 65
Query: 67 HVAKDCT----------VKSSIICYNCNSSGHFARNCPNDSS------------------ 98
H++++CT S CY C GH ARNC
Sbjct: 66 HISRECTKDGGAPMGGRGGGSQECYKCGQVGHIARNCSQGGGYSAGSRGGYGGGAAGGYG 125
Query: 99 ----KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY+C GHM+++C T G+ CY CG GHLS DC
Sbjct: 126 GARQTTCYSCGGFGHMSRDC---TQGQK----------CYNCGEVGHLSRDC 164
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 62/160 (38%), Gaps = 50/160 (31%)
Query: 3 STSTIQCYNCFDFGHYQYSC--PQKSSADARGDKVGIV---------------------C 39
+ T CYNC + GH C PQ R G + C
Sbjct: 30 TKGTPTCYNCGEKGHVSRECTSPQAEKTCYRCGGTGHISRECTKDGGAPMGGRGGGSQEC 89
Query: 40 YKCNNYGHFARECA-----------------------TESVTCYNCSGQGHVAKDCTVKS 76
YKC GH AR C+ TCY+C G GH+++DCT
Sbjct: 90 YKCGQVGHIARNCSQGGGYSAGSRGGYGGGAAGGYGGARQTTCYSCGGFGHMSRDCTQGQ 149
Query: 77 SIICYNCNSSGHFARNCPNDSS--KRCYACHQAGHMAKEC 114
CYNC GH +R+CP ++S + CY C Q GH+ C
Sbjct: 150 K--CYNCGEVGHLSRDCPQETSSERVCYRCKQPGHVQSAC 187
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 16/103 (15%)
Query: 8 QCYNCFDFGHYQYSCPQ-------------KSSADARGDKVGIVCYKCNNYGHFARECAT 54
+CY C GH +C Q +A G CY C +GH +R+C T
Sbjct: 88 ECYKCGQVGHIARNCSQGGGYSAGSRGGYGGGAAGGYGGARQTTCYSCGGFGHMSRDC-T 146
Query: 55 ESVTCYNCSGQGHVAKDCTVKSS--IICYNCNSSGHFARNCPN 95
+ CYNC GH+++DC ++S +CY C GH C N
Sbjct: 147 QGQKCYNCGEVGHLSRDCPQETSSERVCYRCKQPGHVQSACTN 189
>gi|366999588|ref|XP_003684530.1| hypothetical protein TPHA_0B04270 [Tetrapisispora phaffii CBS 4417]
gi|357522826|emb|CCE62096.1| hypothetical protein TPHA_0B04270 [Tetrapisispora phaffii CBS 4417]
Length = 165
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 34/134 (25%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA--------- 53
S QCYNC + GH + C + C+ CN GH +++C+
Sbjct: 43 SVEHKQCYNCGETGHVRSECSVQR------------CFNCNQTGHISKDCSEPRKQKFNN 90
Query: 54 ---------TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS---SKRC 101
V+CY C G H+AKDC ++ CY+C GH +++CP+ S +K C
Sbjct: 91 GMSAQRFSRNNKVSCYKCGGPNHMAKDC-LQEDFKCYSCGGVGHLSKDCPSGSGVNAKVC 149
Query: 102 YACHQAGHMAKECP 115
Y C+Q GH+++ECP
Sbjct: 150 YNCNQTGHISRECP 163
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 53/104 (50%), Gaps = 11/104 (10%)
Query: 2 SSTSTIQCYNCFDFGHYQYSC--PQKS------SADARGDKVGIVCYKCNNYGHFARECA 53
S S +C+NC GH C P+K SA + CYKC H A++C
Sbjct: 60 SECSVQRCFNCNQTGHISKDCSEPRKQKFNNGMSAQRFSRNNKVSCYKCGGPNHMAKDCL 119
Query: 54 TESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
E CY+C G GH++KDC S + +CYNCN +GH +R CP
Sbjct: 120 QEDFKCYSCGGVGHLSKDCPSGSGVNAKVCYNCNQTGHISRECP 163
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 34/155 (21%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH Q C S + + CY C GH EC+ + C+NC+ GH+
Sbjct: 25 CYNCNQAGHLQSECTLPRSVEHK------QCYNCGETGHVRSECSVQ--RCFNCNQTGHI 76
Query: 69 AKDCT-----------------VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMA 111
+KDC+ + + CY C H A++C + K CY+C GH++
Sbjct: 77 SKDCSEPRKQKFNNGMSAQRFSRNNKVSCYKCGGPNHMAKDCLQEDFK-CYSCGGVGHLS 135
Query: 112 KECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
K+CP + + CY C GH+S +C
Sbjct: 136 KDCPSGSGVNAK--------VCYNCNQTGHISREC 162
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 13/118 (11%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
CY C GH A +C ++ + CYNC+ GH+ +CT+ S+ CYNC +GH C
Sbjct: 5 ACYVCGKLGHLAEDCDSDRL-CYNCNQAGHLQSECTLPRSVEHKQCYNCGETGHVRSEC- 62
Query: 95 NDSSKRCYACHQAGHMAKECPGQTAGK------SPEPVVDMSLTCYVCGHQGHLSYDC 146
S +RC+ C+Q GH++K+C K + + ++CY CG H++ DC
Sbjct: 63 --SVQRCFNCNQTGHISKDCSEPRKQKFNNGMSAQRFSRNNKVSCYKCGGPNHMAKDC 118
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 67/164 (40%), Gaps = 47/164 (28%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTC 59
S CY C GH + D D++ CY CN GH EC + E C
Sbjct: 1 MSQKACYVCGKLGHL--------AEDCDSDRL---CYNCNQAGHLQSECTLPRSVEHKQC 49
Query: 60 YNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR-----------------CY 102
YNC GHV +C+V+ C+NCN +GH +++C ++ CY
Sbjct: 50 YNCGETGHVRSECSVQR---CFNCNQTGHISKDCSEPRKQKFNNGMSAQRFSRNNKVSCY 106
Query: 103 ACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C HMAK+C + CY CG GHLS DC
Sbjct: 107 KCGGPNHMAKDC------------LQEDFKCYSCGGVGHLSKDC 138
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS---KRCYACHQAGHMAKEC 114
CY C GH+A+DC S +CYNCN +GH C S K+CY C + GH+ EC
Sbjct: 5 ACYVCGKLGHLAEDCD--SDRLCYNCNQAGHLQSECTLPRSVEHKQCYNCGETGHVRSEC 62
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
Q C+ C GH+S DC +K
Sbjct: 63 SVQR--------------CFNCNQTGHISKDCSEPRK 85
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 10/73 (13%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S CY C GH A +C DS + CY C+QAGH+ EC T +S E CY
Sbjct: 2 SQKACYVCGKLGHLAEDC--DSDRLCYNCNQAGHLQSEC---TLPRSVE-----HKQCYN 51
Query: 136 CGHQGHLSYDCKL 148
CG GH+ +C +
Sbjct: 52 CGETGHVRSECSV 64
>gi|258676573|gb|ACV87294.1| VASA DEAD-box protein [Phallusia mammillata]
Length = 851
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 44/173 (25%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGI-------VCYKCNNYGHFAREC--------- 52
C+ C + GH CP SAD+ G C+KC GH +REC
Sbjct: 164 CFKCGEEGHMSRECP---SADSSSGGFGGSGGGRPKTCFKCGEEGHMSRECPSADSSSGG 220
Query: 53 --ATESVTCYNCSGQGHVAKDCTVKSSII--------CYNCNSSGHFARNCPNDSS---- 98
+S C+ C +GH+++DC S C+ C GH +R+CP+ S
Sbjct: 221 FGGGKSRGCFKCGEEGHMSRDCPSGGSTGFGGGKSKSCFKCGEEGHMSRDCPSGGSQGGF 280
Query: 99 -----KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
K C+ C + GHM++ECP + G S + C+ CG +GH++ DC
Sbjct: 281 GGGRPKGCFKCGEEGHMSRECP--SGGDS----SNRGKGCFKCGEEGHMARDC 327
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 36/172 (20%)
Query: 9 CYNCFDFGHYQYSCPQ--KSSADARGDKVGIVCYKCNNYGHFARECATESV--------- 57
C+ C + GH CP+ + A G C+KC GH +REC +
Sbjct: 132 CFKCGEEGHKSRECPKGGQQGFGASGGGRPKTCFKCGEEGHMSRECPSADSSSGGFGGSG 191
Query: 58 -----TCYNCSGQGHVAKDC----------TVKSSIICYNCNSSGHFARNCPNDSS---- 98
TC+ C +GH++++C S C+ C GH +R+CP+ S
Sbjct: 192 GGRPKTCFKCGEEGHMSRECPSADSSSGGFGGGKSRGCFKCGEEGHMSRDCPSGGSTGFG 251
Query: 99 ----KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
K C+ C + GHM+++CP + C+ CG +GH+S +C
Sbjct: 252 GGKSKSCFKCGEEGHMSRDCPSGGSQGG--FGGGRPKGCFKCGEEGHMSREC 301
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 24/131 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV-CYKCNNYGHFARECATESV---------T 58
C+ C + GH CP S+ C+KC GH +R+C + +
Sbjct: 198 CFKCGEEGHMSRECPSADSSSGGFGGGKSRGCFKCGEEGHMSRDCPSGGSTGFGGGKSKS 257
Query: 59 CYNCSGQGHVAKDCTVKSSII---------CYNCNSSGHFARNCPN--DSSKR---CYAC 104
C+ C +GH+++DC S C+ C GH +R CP+ DSS R C+ C
Sbjct: 258 CFKCGEEGHMSRDCPSGGSQGGFGGGRPKGCFKCGEEGHMSRECPSGGDSSNRGKGCFKC 317
Query: 105 HQAGHMAKECP 115
+ GHMA++CP
Sbjct: 318 GEEGHMARDCP 328
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 62/152 (40%), Gaps = 29/152 (19%)
Query: 10 YNCFDFGHYQYSCPQKS--SADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGH 67
+N FG P +S S ++ + G C+KC GH +REC + SG G
Sbjct: 105 FNSGSFGDK----PDRSFASGESSSNNKGKGCFKCGEEGHKSRECPKGGQQGFGASGGGR 160
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPN-------------DSSKRCYACHQAGHMAKEC 114
C+ C GH +R CP+ K C+ C + GHM++EC
Sbjct: 161 PK---------TCFKCGEEGHMSRECPSADSSSGGFGGSGGGRPKTCFKCGEEGHMSREC 211
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
P S S C+ CG +GH+S DC
Sbjct: 212 P-SADSSSGGFGGGKSRGCFKCGEEGHMSRDC 242
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---------- 58
C+ C + GH CP S G K C+KC GH +R+C +
Sbjct: 229 CFKCGEEGHMSRDCPSGGSTGFGGGKS-KSCFKCGEEGHMSRDCPSGGSQGGFGGGRPKG 287
Query: 59 CYNCSGQGHVAKDC-----TVKSSIICYNCNSSGHFARNCPN 95
C+ C +GH++++C + C+ C GH AR+CP+
Sbjct: 288 CFKCGEEGHMSRECPSGGDSSNRGKGCFKCGEEGHMARDCPS 329
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 21/101 (20%)
Query: 60 YNCSGQGHVAKDCTVKSSIICYNCNSSGH-----FA--RNCPNDSSKRCYACHQAGHMAK 112
+N S G K K +N S G FA + N+ K C+ C + GH ++
Sbjct: 84 WNDSSSGGFGKPSDSKGFGSGFNSGSFGDKPDRSFASGESSSNNKGKGCFKCGEEGHKSR 143
Query: 113 ECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
ECP G + G P+ TC+ CG +GH+S +C
Sbjct: 144 ECPKGGQQGFGASGGGRPK-------TCFKCGEEGHMSREC 177
>gi|326472229|gb|EGD96238.1| zinc knuckle domain-containing protein [Trichophyton tonsurans CBS
112818]
Length = 182
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 63/144 (43%), Gaps = 30/144 (20%)
Query: 36 GIVCYKCNNYGHFARECATESV-TCYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARNC 93
G C+ C H AR+C + TCYNC GQGHV+++CT CY C +GH +R C
Sbjct: 7 GRGCFNCGESSHQARDCPKKGTPTCYNCGGQGHVSRECTQPPKEKSCYRCGMTGHISREC 66
Query: 94 PNDSS---------------KRCYACHQAGHMAKECPGQ-------------TAGKSPEP 125
P+ S + CY C Q GH+A+ C Q +
Sbjct: 67 PSSGSGDNNYSGGYSGGSGGQECYKCGQVGHIARNCSQQGGSGYGGGYGNSGSGSYGSGG 126
Query: 126 VVDMSLTCYVCGHQGHLSYDCKLV 149
S TCY CG GH++ DC V
Sbjct: 127 YGGRSQTCYSCGGYGHMARDCGEV 150
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 54/140 (38%), Gaps = 44/140 (31%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV------CYKCNNYGHFARECATE------- 55
CY C GH CP S D CYKC GH AR C+ +
Sbjct: 53 CYRCGMTGHISRECPSSGSGDNNYSGGYSGGSGGQECYKCGQVGHIARNCSQQGGSGYGG 112
Query: 56 ------------------SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
S TCY+C G GH+A+D C GH +R+CP ++
Sbjct: 113 GYGNSGSGSYGSGGYGGRSQTCYSCGGYGHMARD-----------CGEVGHVSRDCPTEA 161
Query: 98 --SKRCYACHQAGHMAKECP 115
+ CY C QAGH+ CP
Sbjct: 162 KGERVCYKCKQAGHVQAACP 181
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 68/186 (36%), Gaps = 53/186 (28%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA--TESVTCYN 61
+S C+NC + H CP+K + CY C GH +REC + +CY
Sbjct: 5 SSGRGCFNCGESSHQARDCPKKGTP---------TCYNCGGQGHVSRECTQPPKEKSCYR 55
Query: 62 CSGQGHVAKDCTVKSS---------------IICYNCNSSGHFARNCPNDS--------- 97
C GH++++C S CY C GH ARNC
Sbjct: 56 CGMTGHISRECPSSGSGDNNYSGGYSGGSGGQECYKCGQVGHIARNCSQQGGSGYGGGYG 115
Query: 98 ---------------SKRCYACHQAGHMAKECP--GQTAGKSPEPVVDMSLTCYVCGHQG 140
S+ CY+C GHMA++C G + P + CY C G
Sbjct: 116 NSGSGSYGSGGYGGRSQTCYSCGGYGHMARDCGEVGHVSRDCPTEAKGERV-CYKCKQAG 174
Query: 141 HLSYDC 146
H+ C
Sbjct: 175 HVQAAC 180
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 40/105 (38%), Gaps = 27/105 (25%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGI---------------VCYKCNNYGHFAREC 52
+CY C GH +C Q+ + G CY C YGH AR+C
Sbjct: 88 ECYKCGQVGHIARNCSQQGGSGYGGGYGNSGSGSYGSGGYGGRSQTCYSCGGYGHMARDC 147
Query: 53 ATESVTCYNCSGQGHVAKDC--TVKSSIICYNCNSSGHFARNCPN 95
GHV++DC K +CY C +GH CPN
Sbjct: 148 GEV----------GHVSRDCPTEAKGERVCYKCKQAGHVQAACPN 182
>gi|67968237|dbj|BAE00180.1| VASA RNA helicase [Daphnia magna]
Length = 779
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 26/148 (17%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA---------TESVTC 59
C+ C + GH+ CPQ G + C+KC GHF+REC S C
Sbjct: 168 CHKCGEEGHFSRECPQAGGGGGSGPRT---CHKCGEEGHFSRECPQGGGGGGGGGGSRAC 224
Query: 60 YNCSGQGHVAKDC------TVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHM 110
+ C +GH +++C C+ C GH +R+CP +C+ CH+AGH
Sbjct: 225 HKCGEEGHFSRECPQGGGGGGSGPRTCHKCGEEGHMSRDCPQGGGGGDGKCFKCHEAGHT 284
Query: 111 AKECPGQTA-----GKSPEPVVDMSLTC 133
+K+CP + GK E + ++TC
Sbjct: 285 SKDCPNPFSELTEDGKPREQYIPEAVTC 312
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 59/132 (44%), Gaps = 26/132 (19%)
Query: 36 GIVCYKCNNYGHFARECA-------TESVTCYNCSGQGHVAKDC------TVKSSIICYN 82
G C+KC GH AREC S C+ C +GH +++C C+
Sbjct: 138 GRPCHKCGEEGHMARECPKGGGGGGGGSRACHKCGEEGHFSRECPQAGGGGGSGPRTCHK 197
Query: 83 CNSSGHFARNCPNDS--------SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
C GHF+R CP S+ C+ C + GH ++ECP G P TC+
Sbjct: 198 CGEEGHFSRECPQGGGGGGGGGGSRACHKCGEEGHFSRECPQGGGGGGSGP-----RTCH 252
Query: 135 VCGHQGHLSYDC 146
CG +GH+S DC
Sbjct: 253 KCGEEGHMSRDC 264
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 66/159 (41%), Gaps = 32/159 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-------TCYN 61
C+ C + GH CP+ G + C+KC GHF+REC TC+
Sbjct: 141 CHKCGEEGHMARECPKGGGGGGGGSR---ACHKCGEEGHFSRECPQAGGGGGSGPRTCHK 197
Query: 62 CSGQGHVAKDC--------TVKSSIICYNCNSSGHFARNCPN------DSSKRCYACHQA 107
C +GH +++C S C+ C GHF+R CP + C+ C +
Sbjct: 198 CGEEGHFSRECPQGGGGGGGGGGSRACHKCGEEGHFSRECPQGGGGGGSGPRTCHKCGEE 257
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GHM+++C P+ C+ C GH S DC
Sbjct: 258 GHMSRDC--------PQGGGGGDGKCFKCHEAGHTSKDC 288
>gi|71990816|ref|NP_491207.3| Protein GLH-4 [Caenorhabditis elegans]
gi|51338745|sp|O76743.2|GLH4_CAEEL RecName: Full=ATP-dependent RNA helicase glh-4; AltName:
Full=Germline helicase 4
gi|373219730|emb|CCD69784.1| Protein GLH-4 [Caenorhabditis elegans]
Length = 1156
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 49/116 (42%), Gaps = 15/116 (12%)
Query: 39 CYKCNNYGHFARECATESVT---CYNCSGQGHVAKDCTVKSSI--ICYNCNSSGHFARNC 93
C+ C GH ++EC V C NC GH A DC C NC GHFA +C
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHFAVDC 631
Query: 94 PNDSSKR--CYACHQAGHMAKECPGQTAGKSP-EPVVDMSLTCYVCGHQGHLSYDC 146
R C C Q GH AK+C + P EP C C +GH Y+C
Sbjct: 632 DQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEP-------CRRCAEEGHWGYEC 680
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 49/117 (41%), Gaps = 17/117 (14%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CYNCSGQ 65
C+NC + GH C + C C GHFA +C V C NC +
Sbjct: 572 CHNCGEEGHISKECDKPKVPR-------FPCRNCEQLGHFASDCDQPRVPRGPCRNCGIE 624
Query: 66 GHVAKDCTVKSSI--ICYNCNSSGHFARNCPNDS-----SKRCYACHQAGHMAKECP 115
GH A DC C NC GHFA++C N+ ++ C C + GH ECP
Sbjct: 625 GHFAVDCDQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 13/93 (13%)
Query: 59 CYNCSGQGHVAKDCTVKS--SIICYNCNSSGHFARNCPNDSSKR--CYACHQAGHMAKEC 114
C+NC +GH++K+C C NC GHFA +C R C C GH A +C
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHFAVDC 631
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ P C CG +GH + DC+
Sbjct: 632 DQPKVPRGP---------CRNCGQEGHFAKDCQ 655
>gi|449532848|ref|XP_004173390.1| PREDICTED: DNA-binding protein HEXBP-like, partial [Cucumis
sativus]
Length = 425
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 74/176 (42%), Gaps = 37/176 (21%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHF---ARECATESVTC 59
S+S C C D GH +SC + D D I CY C +GH T V+C
Sbjct: 250 SSSLRICLKCGDSGHDMFSCQNHYADD---DLKKIQCYICQKFGHLCCVNFTSDTSVVSC 306
Query: 60 YNCSGQGHVAKDCT--------VKSSIICYNCNSSGHFARNCPN--DSSKR--------- 100
Y C GH C+ SS CY C GHFAR C + S KR
Sbjct: 307 YKCGQTGHTGLSCSRLRGEASGAVSSSQCYRCGDEGHFARECTSATKSGKRNREEASGAA 366
Query: 101 ----CYACHQAGHMAKECPGQTAGKSPEPVVDMS------LTCYVCGHQGHLSYDC 146
CY C + GH A+EC T G + +++ + +CY CG QGH + +C
Sbjct: 367 SPNPCYKCGEEGHFARECTSSTKG--GKRILEETSGAASPSSCYRCGEQGHFAREC 420
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 61/136 (44%), Gaps = 29/136 (21%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIV----CYKCNNYGHFARECATESV 57
S TS + CY C GH SC + RG+ G V CY+C + GHFAREC
Sbjct: 299 SDTSVVSCYKCGQTGHTGLSCSR-----LRGEASGAVSSSQCYRCGDEGHFAREC----- 348
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS--KR-------------CY 102
T SG+ + + S CY C GHFAR C + + KR CY
Sbjct: 349 TSATKSGKRNREEASGAASPNPCYKCGEEGHFARECTSSTKGGKRILEETSGAASPSSCY 408
Query: 103 ACHQAGHMAKECPGQT 118
C + GH A+EC G T
Sbjct: 409 RCGEQGHFARECAGST 424
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 67/154 (43%), Gaps = 30/154 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC + GH +C KS+ R C+ C + H A+ C +++ C+ C GH
Sbjct: 188 CYNCGEEGHNAVNC--KSAKRKR------PCFVCGSLEHNAKSC-SKARDCFICKKSGHR 238
Query: 69 AKDCTVK------SSIICYNCNSSGHFARNCPN----DSSKR--CYACHQAGHMAKECPG 116
A C K S IC C SGH +C N D K+ CY C + GH+ C
Sbjct: 239 ANACPEKHKNGSSSLRICLKCGDSGHDMFSCQNHYADDDLKKIQCYICQKFGHLC--CVN 296
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
T+ S ++CY CG GH C ++
Sbjct: 297 FTSDTS-------VVSCYKCGQTGHTGLSCSRLR 323
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 58 TCYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
TCYNC +GH A +C + K C+ C S H A++C ++ C+ C ++GH A CP
Sbjct: 187 TCYNCGEEGHNAVNCKSAKRKRPCFVCGSLEHNAKSCSK--ARDCFICKKSGHRANACPE 244
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ S + C CG GH + C+
Sbjct: 245 KHKNGSSSLRI-----CLKCGDSGHDMFSCQ 270
>gi|3386540|gb|AAC28387.1| germline RNA helicase-4 [Caenorhabditis elegans]
Length = 1156
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 49/116 (42%), Gaps = 15/116 (12%)
Query: 39 CYKCNNYGHFARECATESVT---CYNCSGQGHVAKDCTVKSSI--ICYNCNSSGHFARNC 93
C+ C GH ++EC V C NC GH A DC C NC GHFA +C
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHFAVDC 631
Query: 94 PNDSSKR--CYACHQAGHMAKECPGQTAGKSP-EPVVDMSLTCYVCGHQGHLSYDC 146
R C C Q GH AK+C + P EP C C +GH Y+C
Sbjct: 632 DQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEP-------CRRCAEEGHWGYEC 680
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 49/117 (41%), Gaps = 17/117 (14%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CYNCSGQ 65
C+NC + GH C + C C GHFA +C V C NC +
Sbjct: 572 CHNCGEEGHISKECDKPKVPR-------FPCRNCEQLGHFASDCDQPRVPRGPCRNCGIE 624
Query: 66 GHVAKDCTVKSSI--ICYNCNSSGHFARNCPNDS-----SKRCYACHQAGHMAKECP 115
GH A DC C NC GHFA++C N+ ++ C C + GH ECP
Sbjct: 625 GHFAVDCDQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 13/93 (13%)
Query: 59 CYNCSGQGHVAKDCTVKS--SIICYNCNSSGHFARNCPNDSSKR--CYACHQAGHMAKEC 114
C+NC +GH++K+C C NC GHFA +C R C C GH A +C
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHFAVDC 631
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ P C CG +GH + DC+
Sbjct: 632 DQPKVPRGP---------CRNCGQEGHFAKDCQ 655
>gi|395333861|gb|EJF66238.1| hypothetical protein DICSQDRAFT_48600 [Dichomitus squalens LYAD-421
SS1]
Length = 197
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 61/147 (41%), Gaps = 34/147 (23%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSAD------------ARGDKVGIVCYKCNNYGHF 48
+ T CY C GH CP +A+ + + CY+C GH
Sbjct: 41 TAETKAKTCYKCGQEGHISRECPDNQNANGGTSGGGSYTAFSSSNSGSTECYRCGKVGHI 100
Query: 49 ARECA--------------------TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGH 88
AR C + TCY C G GH+++DC S CYNC+ GH
Sbjct: 101 ARSCPEAPGGTSGGYGGGGYSNFGGGQQRTCYTCGGVGHLSRDCVQGSK--CYNCSGFGH 158
Query: 89 FARNCPNDSSKRCYACHQAGHMAKECP 115
+++CP + CY C GH++++CP
Sbjct: 159 ISKDCPQPQRRACYTCGSEGHISRDCP 185
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGI----------VCYKCNNYGHFARE 51
S++ + +CY C GH SCP+ + G G CY C GH +R+
Sbjct: 84 SNSGSTECYRCGKVGHIARSCPEAPGGTSGGYGGGGYSNFGGGQQRTCYTCGGVGHLSRD 143
Query: 52 CATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND 96
C S CYNCSG GH++KDC CY C S GH +R+CPN+
Sbjct: 144 CVQGS-KCYNCSGFGHISKDCPQPQRRACYTCGSEGHISRDCPNN 187
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 74/191 (38%), Gaps = 65/191 (34%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV--TCYNCSGQG 66
C+NC FGH +CP+ + CY C GH +++C E+ TCY C +G
Sbjct: 6 CFNCGGFGHQAANCPKAGTP---------TCYNCGLEGHVSKDCTAETKAKTCYKCGQEG 56
Query: 67 HVAKDC---------------------TVKSSIICYNCNSSGHFARNCPN---------- 95
H++++C + S CY C GH AR+CP
Sbjct: 57 HISRECPDNQNANGGTSGGGSYTAFSSSNSGSTECYRCGKVGHIARSCPEAPGGTSGGYG 116
Query: 96 ---------DSSKRCYACHQAGHMAKECP-----------GQTAGKSPEPVVDMSLTCYV 135
+ CY C GH++++C G + P+P CY
Sbjct: 117 GGGYSNFGGGQQRTCYTCGGVGHLSRDCVQGSKCYNCSGFGHISKDCPQP---QRRACYT 173
Query: 136 CGHQGHLSYDC 146
CG +GH+S DC
Sbjct: 174 CGSEGHISRDC 184
>gi|296810174|ref|XP_002845425.1| zinc knuckle domain-containing protein [Arthroderma otae CBS
113480]
gi|238842813|gb|EEQ32475.1| zinc knuckle domain-containing protein [Arthroderma otae CBS
113480]
Length = 185
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 62/147 (42%), Gaps = 33/147 (22%)
Query: 36 GIVCYKCNNYGHFARECATESV-TCYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARNC 93
G C+ C H AR+C + TCYNC GQGHV+++CT CY C +GH +R C
Sbjct: 7 GRGCFNCGESSHQARDCPKKGTPTCYNCGGQGHVSRECTQAPKEKSCYRCGMTGHISREC 66
Query: 94 PNDSS----------------KRCYACHQAGHMAKECPGQ---------------TAGKS 122
P S + CY C Q GH+A+ C Q +
Sbjct: 67 PTSGSGDNNNYSGGYSGGSGGQECYKCGQVGHIARNCSQQGGSGYGSGGYGNSGSGSYGG 126
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDCKLV 149
S TCY CG GH++ DC V
Sbjct: 127 GGGYGGRSQTCYSCGGYGHMARDCGEV 153
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 55/143 (38%), Gaps = 47/143 (32%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV-------CYKCNNYGHFARECATE------ 55
CY C GH CP S D G CYKC GH AR C+ +
Sbjct: 53 CYRCGMTGHISRECPTSGSGDNNNYSGGYSGGSGGQECYKCGQVGHIARNCSQQGGSGYG 112
Query: 56 ---------------------SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
S TCY+C G GH+A+D C GH +R+CP
Sbjct: 113 SGGYGNSGSGSYGGGGGYGGRSQTCYSCGGYGHMARD-----------CGEVGHVSRDCP 161
Query: 95 NDS--SKRCYACHQAGHMAKECP 115
++ + CY C QAGH+ CP
Sbjct: 162 TEAKGERVCYKCKQAGHVQAACP 184
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 67/184 (36%), Gaps = 56/184 (30%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQG 66
C+NC + H CP+K + CY C GH +REC A + +CY C G
Sbjct: 10 CFNCGESSHQARDCPKKGTP---------TCYNCGGQGHVSRECTQAPKEKSCYRCGMTG 60
Query: 67 HVAKDCTVKSS----------------IICYNCNSSGHFARNCPNDS------------- 97
H++++C S CY C GH ARNC
Sbjct: 61 HISRECPTSGSGDNNNYSGGYSGGSGGQECYKCGQVGHIARNCSQQGGSGYGSGGYGNSG 120
Query: 98 -------------SKRCYACHQAGHMAKECP--GQTAGKSPEPVVDMSLTCYVCGHQGHL 142
S+ CY+C GHMA++C G + P + CY C GH+
Sbjct: 121 SGSYGGGGGYGGRSQTCYSCGGYGHMARDCGEVGHVSRDCPTEAKGERV-CYKCKQAGHV 179
Query: 143 SYDC 146
C
Sbjct: 180 QAAC 183
>gi|242791199|ref|XP_002481710.1| zinc knuckle transcription factor (CnjB), putative [Talaromyces
stipitatus ATCC 10500]
gi|218718298|gb|EED17718.1| zinc knuckle transcription factor (CnjB), putative [Talaromyces
stipitatus ATCC 10500]
Length = 446
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 59/130 (45%), Gaps = 21/130 (16%)
Query: 33 DKVGIVCYKCNNYGHFARECATESVT-------CYNCSGQGHVAKDCT--VKSSIICYNC 83
D++ C C GH +R C E V C NCS GH A+DCT KS C NC
Sbjct: 257 DRMIPKCSNCGEMGHISRACKQERVEFERVEIKCVNCSEVGHRARDCTQPRKSKFGCRNC 316
Query: 84 NSSGHFARNC---PNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQG 140
+S H A C PN + C C+ GH AK+CP + ++ C CG +
Sbjct: 317 GASDHKAAECTEPPNMDNVECRRCNDTGHFAKDCPSASK---------VAKACRKCGAED 367
Query: 141 HLSYDCKLVQ 150
HLS DC Q
Sbjct: 368 HLSRDCDQPQ 377
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 19/147 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CYNCSG 64
+C NC + GH +C Q+ ++V I C C+ GH AR+C + C NC
Sbjct: 262 KCSNCGEMGHISRACKQER---VEFERVEIKCVNCSEVGHRARDCTQPRKSKFGCRNCGA 318
Query: 65 QGHVAKDCTVK---SSIICYNCNSSGHFARNCPNDS--SKRCYACHQAGHMAKECPGQTA 119
H A +CT ++ C CN +GHFA++CP+ S +K C C H++++C
Sbjct: 319 SDHKAAECTEPPNMDNVECRRCNDTGHFAKDCPSASKVAKACRKCGAEDHLSRDC----- 373
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+P +TC C GH DC
Sbjct: 374 ---DQPQNMDLITCNNCDETGHYGRDC 397
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 26/134 (19%)
Query: 7 IQCYNCFDFGHYQYSC--PQKSSADARG---------------DKVGIVCYKCNNYGHFA 49
I+C NC + GH C P+KS R + + C +CN+ GHFA
Sbjct: 288 IKCVNCSEVGHRARDCTQPRKSKFGCRNCGASDHKAAECTEPPNMDNVECRRCNDTGHFA 347
Query: 50 RECATESVT---CYNCSGQGHVAKDCTVKSS---IICYNCNSSGHFARNC--PNDSSK-R 100
++C + S C C + H+++DC + I C NC+ +GH+ R+C P D S+ +
Sbjct: 348 KDCPSASKVAKACRKCGAEDHLSRDCDQPQNMDLITCNNCDETGHYGRDCPKPRDWSRVK 407
Query: 101 CYACHQAGHMAKEC 114
C C + GH + C
Sbjct: 408 CTNCGEMGHTHRRC 421
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 14/98 (14%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TESVT 58
+ ++C C D GH+ CP S KV C KC H +R+C + +T
Sbjct: 331 NMDNVECRRCNDTGHFAKDCPSAS-------KVAKACRKCGAEDHLSRDCDQPQNMDLIT 383
Query: 59 CYNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNC 93
C NC GH +DC S + C NC GH R C
Sbjct: 384 CNNCDETGHYGRDCPKPRDWSRVKCTNCGEMGHTHRRC 421
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 42/105 (40%), Gaps = 6/105 (5%)
Query: 16 GHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES----VTCYNCSGQGHVAKD 71
G + P K+ D+ G C C GHF R+C C+NC +GH D
Sbjct: 22 GPSKEFAPVKAQYDSAGPPRNDTCRNCGQSGHFVRDCPEPRQGGGGGCFNCGEEGHNKAD 81
Query: 72 CTVKSSI--ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
C C CN GH A CP ++ C C + GH EC
Sbjct: 82 CPHPRVFKGTCRICNEEGHPAMECPQKPAEVCKNCRKEGHKIAEC 126
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 40/95 (42%), Gaps = 16/95 (16%)
Query: 58 TCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCPNDSSKR--CYACHQAGHMAK 112
TC NC GH +DC C+NC GH +CP+ + C C++ GH A
Sbjct: 44 TCRNCGQSGHFVRDCPEPRQGGGGGCFNCGEEGHNKADCPHPRVFKGTCRICNEEGHPAM 103
Query: 113 ECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
ECP + A C C +GH +CK
Sbjct: 104 ECPQKPAE-----------VCKNCRKEGHKIAECK 127
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 9/88 (10%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSGQ 65
C NC GH+ CP+ G C+ C GH +C V TC C+ +
Sbjct: 45 CRNCGQSGHFVRDCPEPRQG------GGGGCFNCGEEGHNKADCPHPRVFKGTCRICNEE 98
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNC 93
GH A +C K + +C NC GH C
Sbjct: 99 GHPAMECPQKPAEVCKNCRKEGHKIAEC 126
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 42/101 (41%), Gaps = 16/101 (15%)
Query: 59 CYNCSGQGHVAKDCT------VKSSIICYNCNSSGHFARNC--PNDSSKRCYACHQAGHM 110
C NC GH+++ C + I C NC+ GH AR+C P S C C + H
Sbjct: 263 CSNCGEMGHISRACKQERVEFERVEIKCVNCSEVGHRARDCTQPRKSKFGCRNCGASDHK 322
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
A EC EP ++ C C GH + DC K
Sbjct: 323 AAECT--------EPPNMDNVECRRCNDTGHFAKDCPSASK 355
>gi|224134074|ref|XP_002327749.1| predicted protein [Populus trichocarpa]
gi|222836834|gb|EEE75227.1| predicted protein [Populus trichocarpa]
Length = 235
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 65/136 (47%), Gaps = 23/136 (16%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSAD---------ARGDKVGIVCYKCNNYGHFAREC 52
S+T+ C+NC + GH C SS G CYKC N GHFAREC
Sbjct: 100 SNTNGGGCFNCGNPGHIARECNNNSSKSYNYNNNNNRTGGGGGDFGCYKCGNSGHFAREC 159
Query: 53 --ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN-----------DSSK 99
+ CY+C G GHVA+DC S CYNC GH AR+C + ++
Sbjct: 160 TKGNNNNGCYSCGGFGHVARDCPGGSGA-CYNCGGHGHLARDCTSARGSGGGRFGSGNTG 218
Query: 100 RCYACHQAGHMAKECP 115
C+ C + GH A++CP
Sbjct: 219 GCFNCGKDGHFARDCP 234
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 55/131 (41%), Gaps = 21/131 (16%)
Query: 36 GIVCYKCNNYGHFAREC-------------------ATESVTCYNCSGQGHVAKDCTV-K 75
G C+ C N GH AREC CY C GH A++CT
Sbjct: 104 GGGCFNCGNPGHIARECNNNSSKSYNYNNNNNRTGGGGGDFGCYKCGNSGHFARECTKGN 163
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
++ CY+C GH AR+CP S CY C GH+A++C + C+
Sbjct: 164 NNNGCYSCGGFGHVARDCPGGSGA-CYNCGGHGHLARDCTSARGSGGGRFGSGNTGGCFN 222
Query: 136 CGHQGHLSYDC 146
CG GH + DC
Sbjct: 223 CGKDGHFARDC 233
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 31/116 (26%)
Query: 50 RECATESVTCYNCSGQGHVAKDC------------------TVKSSIICYNCNSSGHFAR 91
R T C+NC GH+A++C CY C +SGHFAR
Sbjct: 98 RNSNTNGGGCFNCGNPGHIARECNNNSSKSYNYNNNNNRTGGGGGDFGCYKCGNSGHFAR 157
Query: 92 NC-PNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C +++ CY+C GH+A++CPG + CY CG GHL+ DC
Sbjct: 158 ECTKGNNNNGCYSCGGFGHVARDCPGGSG------------ACYNCGGHGHLARDC 201
>gi|154346046|ref|XP_001568960.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066302|emb|CAM44093.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 573
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
++CY C GH +CPQ CY C +GH ++ C ++ C+ CS G
Sbjct: 133 LECYQCHQLGHMMTTCPQTR------------CYNCGTFGHSSQICHSKP-HCFQCSHSG 179
Query: 67 HVAKDCTVKSS-IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
H + +C ++S +CY CN GH A NCP + C CH+ GH CP
Sbjct: 180 HRSSECPMRSKGRLCYQCNEPGHEAANCPQ--GQLCRMCHRPGHFVARCP 227
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARG------DKVGI-------VCYKCNNYGHFAREC 52
TI+C C GH++ CPQ +S R D V + VC C + H C
Sbjct: 67 TIKCNLCKRLGHFRRDCPQDASKRVRSAENAPCDDVNLDEEYRWSVCRNCGSSRHIQANC 126
Query: 53 AT--ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
+++ CY C GH+ C CYNC + GH ++ C S C+ C +GH
Sbjct: 127 PVRYQALECYQCHQLGHMMTTC---PQTRCYNCGTFGHSSQIC--HSKPHCFQCSHSGHR 181
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ ECP ++ G+ CY C GH + +C
Sbjct: 182 SSECPMRSKGR----------LCYQCNEPGHEAANC 207
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC---ATESVT 58
S+ S + C NC GH + +CP I C C GHF R+C A++ V
Sbjct: 45 SAASAVVCDNCKTRGHLRRNCPT------------IKCNLCKRLGHFRRDCPQDASKRVR 92
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND-SSKRCYACHQAGHMAKECPGQ 117
+ V D + S +C NC SS H NCP + CY CHQ GHM CP
Sbjct: 93 SAENAPCDDVNLDEEYRWS-VCRNCGSSRHIQANCPVRYQALECYQCHQLGHMMTTCPQT 151
Query: 118 ------TAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
T G S + + C+ C H GH S +C + K
Sbjct: 152 RCYNCGTFGHSSQ-ICHSKPHCFQCSHSGHRSSECPMRSK 190
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 50/116 (43%), Gaps = 18/116 (15%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES--VT 58
M++ +CYNC FGH C K C++C++ GH + EC S
Sbjct: 145 MTTCPQTRCYNCGTFGHSSQICHSKPH-----------CFQCSHSGHRSSECPMRSKGRL 193
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
CY C+ GH A +C +C C+ GHF CP C CH GH A C
Sbjct: 194 CYQCNEPGHEAANC--PQGQLCRMCHRPGHFVARCPEVV---CNLCHVKGHTAGVC 244
>gi|308809325|ref|XP_003081972.1| putative DAK2 domain containing protein (ISS) [Ostreococcus tauri]
gi|116060439|emb|CAL55775.1| putative DAK2 domain containing protein (ISS), partial
[Ostreococcus tauri]
Length = 843
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/134 (32%), Positives = 49/134 (36%), Gaps = 26/134 (19%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--------------- 52
+C C GHY CP A C C GHFAREC
Sbjct: 58 KCSRCGGLGHYARDCPSPVGAIMGVGARDGACRICGRMGHFARECRDRAGGGYDAPRRRL 117
Query: 53 ATESVTCYNCSGQGHVAKDCTV---------KSSIICYNCNSSGHFARNCPNDSSKRCYA 103
A C C +GH A C K C NC GH A+ CP + C
Sbjct: 118 AGAEDVCNRCGEKGHWANMCPQPDNRPESERKKLGACRNCGEEGHIAKECPK--PQMCRI 175
Query: 104 CHQAGHMAKECPGQ 117
C Q GH+AKECP Q
Sbjct: 176 CKQEGHIAKECPNQ 189
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 48/189 (25%), Positives = 71/189 (37%), Gaps = 62/189 (32%)
Query: 3 STSTIQCYNCFDFGHYQYSC-----------PQKSSADAR-GDKVGIVCYKCNNYGHFAR 50
S T +C C GH+ C P + AR GDK C +C GH+AR
Sbjct: 15 SRGTDRCNRCGQIGHWAGECALPDTRGPGASPMRPMGGARPGDK----CSRCGGLGHYAR 70
Query: 51 ECAT----------ESVTCYNCSGQGHVAKDCTVK--------------SSIICYNCNSS 86
+C + C C GH A++C + + +C C
Sbjct: 71 DCPSPVGAIMGVGARDGACRICGRMGHFARECRDRAGGGYDAPRRRLAGAEDVCNRCGEK 130
Query: 87 GHFARNCPNDSSK---------RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCG 137
GH+A CP ++ C C + GH+AKECP P+ C +C
Sbjct: 131 GHWANMCPQPDNRPESERKKLGACRNCGEEGHIAKECP------KPQ-------MCRICK 177
Query: 138 HQGHLSYDC 146
+GH++ +C
Sbjct: 178 QEGHIAKEC 186
Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 10/70 (14%)
Query: 87 GHFARNCPNDS----SKRCYACHQAGHMAKECP-GQTAGKSPEPVVDMSLT-----CYVC 136
GH+AR CP + + RC C Q GH A EC T G P+ M C C
Sbjct: 3 GHYARECPRGAPSRGTDRCNRCGQIGHWAGECALPDTRGPGASPMRPMGGARPGDKCSRC 62
Query: 137 GHQGHLSYDC 146
G GH + DC
Sbjct: 63 GGLGHYARDC 72
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 48/132 (36%), Gaps = 31/132 (23%)
Query: 16 GHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVK 75
GHY CP+ A +RG C +C GH+A ECA S +
Sbjct: 3 GHYARECPR--GAPSRGTDR---CNRCGQIGHWAGECALPDTRGPGASPMRPMGG----- 52
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
AR P D +C C GH A++CP D + C +
Sbjct: 53 --------------AR--PGD---KCSRCGGLGHYARDCPSPVGAIMGVGARDGA--CRI 91
Query: 136 CGHQGHLSYDCK 147
CG GH + +C+
Sbjct: 92 CGRMGHFARECR 103
>gi|296087206|emb|CBI33580.3| unnamed protein product [Vitis vinifera]
Length = 480
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C FG ++ Q +R D + C KC GHFAR+C +V C NC GH+
Sbjct: 115 CSLMLSFGLNYHNSQQIILLISRQDYL---CNKCKRLGHFARDCPNVTV-CNNCGLPGHI 170
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKE--CPGQTA 119
A S+ IC+NC SGH A CPND C+ C + GH+A++ CPG A
Sbjct: 171 AAK--YNSTTICWNCKESGHLASQCPNDPV--CHMCGKMGHLAQDCSCPGLPA 219
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 30/85 (35%)
Query: 79 ICYNCNSSGHFARNCPN-----------------DSSKRCYACHQAGHMAKECPGQTAGK 121
+C C GHFAR+CPN +S+ C+ C ++GH+A +CP
Sbjct: 141 LCNKCKRLGHFARDCPNVTVCNNCGLPGHIAAKYNSTTICWNCKESGHLASQCPN----- 195
Query: 122 SPEPVVDMSLTCYVCGHQGHLSYDC 146
+PV C++CG GHL+ DC
Sbjct: 196 --DPV------CHMCGKMGHLAQDC 212
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 19/107 (17%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C C GH+ CP + VC C GH A + + ++ C+NC GH+
Sbjct: 142 CNKCKRLGHFARDCPNVT-----------VCNNCGLPGHIAAKYNSTTI-CWNCKESGHL 189
Query: 69 AKDCTVKSSIICYNCNSSGHFARNC-----PNDSSKRCYACHQAGHM 110
A C + +C+ C GH A++C P ++ C C++ G +
Sbjct: 190 ASQC--PNDPVCHMCGKMGHLAQDCSCPGLPAHDARLCNNCYKPGQV 234
>gi|341876702|gb|EGT32637.1| hypothetical protein CAEBREN_32053 [Caenorhabditis brenneri]
Length = 1129
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 59 CYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNCPNDSSK--RCYACHQAGHMAKECP 115
C NC +GH A+DC K C NCN GHF+R+CP C C + GH +KEC
Sbjct: 665 CRNCGEEGHFARDCPQPKVERPCRNCNEVGHFSRDCPQPKVPFGPCRNCGEEGHFSKECT 724
Query: 116 GQTAGKSP-EPVVDMSLTCYVCGHQGHLSYDC 146
+ P EP C CG +GH Y+C
Sbjct: 725 KERVRLEPTEP-------CRRCGEEGHWGYEC 749
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 16/95 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSGQ 65
C NC + GH+ CPQ KV C CN GHF+R+C V C NC +
Sbjct: 665 CRNCGEEGHFARDCPQP--------KVERPCRNCNEVGHFSRDCPQPKVPFGPCRNCGEE 716
Query: 66 GHVAKDCT-----VKSSIICYNCNSSGHFARNCPN 95
GH +K+CT ++ + C C GH+ CP+
Sbjct: 717 GHFSKECTKERVRLEPTEPCRRCGEEGHWGYECPS 751
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 39 CYKCNNYGHFARECATESVT--CYNCSGQGHVAKDCTVKSSII--CYNCNSSGHFARNCP 94
C C GHFAR+C V C NC+ GH ++DC C NC GHF++ C
Sbjct: 665 CRNCGEEGHFARDCPQPKVERPCRNCNEVGHFSRDCPQPKVPFGPCRNCGEEGHFSKECT 724
Query: 95 NDS-----SKRCYACHQAGHMAKECPGQ 117
+ ++ C C + GH ECP +
Sbjct: 725 KERVRLEPTEPCRRCGEEGHWGYECPSR 752
>gi|40891625|gb|AAR37337.1| vasa-like protein [Crassostrea gigas]
Length = 758
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 47/114 (41%), Gaps = 25/114 (21%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NC + GH+ CP+ GDK C C GHF REC +G
Sbjct: 160 CRNCGEEGHFARECPEPRKGG--GDKG---CRNCGEEGHFVRECPEPRKGGGGGGDRG-- 212
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSSK-------RCYACHQAGHMAKECP 115
C N GHFAR CPN + +C+ C + GHMA++CP
Sbjct: 213 -----------CRNWGEEGHFARECPNPKKEGGGGGGGKCFKCQEEGHMARDCP 255
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 36/95 (37%), Gaps = 28/95 (29%)
Query: 80 CYNCNSSGHFARNCPN----DSSKRCYACHQAGHMAKECP-------------------- 115
C NC GHFAR CP K C C + GH +ECP
Sbjct: 160 CRNCGEEGHFARECPEPRKGGGDKGCRNCGEEGHFVRECPEPRKGGGGGGDRGCRNWGEE 219
Query: 116 GQTAGKSPEPVVDMSLT----CYVCGHQGHLSYDC 146
G A + P P + C+ C +GH++ DC
Sbjct: 220 GHFARECPNPKKEGGGGGGGKCFKCQEEGHMARDC 254
>gi|157877134|ref|XP_001686898.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68129973|emb|CAJ09281.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 566
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 16/110 (14%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
++CY C GH +CPQ CY C +GH ++ C ++ C++CS G
Sbjct: 126 LECYQCHQLGHMMTTCPQTR------------CYNCGTFGHSSQICHSKP-HCFHCSHSG 172
Query: 67 HVAKDCTVKSS-IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
H + +C ++S +CY CN GH A NCP + C CH+ GH CP
Sbjct: 173 HRSSECPMRSKGRVCYQCNEPGHEAANCPQ--GQLCRMCHRPGHFVAHCP 220
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 30/155 (19%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARG------DKVGI-------VCYKCNNYGHFARECA 53
I+C C GHY+ CPQ +S R ++V + VC C + H C
Sbjct: 61 IKCNLCKRLGHYRRDCPQDASKRVRSVGGAPHEEVNLDEEYRWSVCRNCGSSRHIQANCP 120
Query: 54 T--ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMA 111
+++ CY C GH+ C CYNC + GH ++ C S C+ C +GH +
Sbjct: 121 VRYQALECYQCHQLGHMMTTC---PQTRCYNCGTFGHSSQIC--HSKPHCFHCSHSGHRS 175
Query: 112 KECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
ECP ++ G+ CY C GH + +C
Sbjct: 176 SECPMRSKGR----------VCYQCNEPGHEAANC 200
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC---ATESVTCYNCS 63
+ C NC GH + +CP+ I C C GH+ R+C A++ V +
Sbjct: 43 VVCDNCKTRGHLRRNCPK------------IKCNLCKRLGHYRRDCPQDASKRVRSVGGA 90
Query: 64 GQGHVAKDCTVKSSIICYNCNSSGHFARNCPND-SSKRCYACHQAGHMAKECPGQ----- 117
V D + S +C NC SS H NCP + CY CHQ GHM CP
Sbjct: 91 PHEEVNLDEEYRWS-VCRNCGSSRHIQANCPVRYQALECYQCHQLGHMMTTCPQTRCYNC 149
Query: 118 -TAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
T G S + + C+ C H GH S +C + K
Sbjct: 150 GTFGHSSQ-ICHSKPHCFHCSHSGHRSSECPMRSK 183
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 50/116 (43%), Gaps = 18/116 (15%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES--VT 58
M++ +CYNC FGH C K C+ C++ GH + EC S
Sbjct: 138 MTTCPQTRCYNCGTFGHSSQICHSKPH-----------CFHCSHSGHRSSECPMRSKGRV 186
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
CY C+ GH A +C +C C+ GHF +CP C CH GH A C
Sbjct: 187 CYQCNEPGHEAANC--PQGQLCRMCHRPGHFVAHCPEVV---CNLCHLKGHTAGVC 237
>gi|146104100|ref|XP_001469726.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|398024576|ref|XP_003865449.1| hypothetical protein, conserved [Leishmania donovani]
gi|134074096|emb|CAM72838.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322503686|emb|CBZ38772.1| hypothetical protein, conserved [Leishmania donovani]
Length = 566
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 16/110 (14%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
++CY C GH +CPQ CY C +GH ++ C ++ C++CS G
Sbjct: 126 LECYQCHQLGHMMTTCPQTR------------CYNCGTFGHSSQICHSKP-HCFHCSHSG 172
Query: 67 HVAKDCTVKSS-IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
H + +C ++S +CY CN GH A NCP + C CH+ GH CP
Sbjct: 173 HRSSECPMRSKGRVCYQCNEPGHEAANCPQ--GQLCRMCHRPGHFVAHCP 220
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 30/155 (19%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARG------DKVGI-------VCYKCNNYGHFARECA 53
I+C C GHY+ CPQ +S R ++V + VC C + H C
Sbjct: 61 IKCNLCKRLGHYRRDCPQDASKRVRSVEGAPHEEVNLDEEYRWSVCRHCGSSRHIQANCP 120
Query: 54 T--ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMA 111
+++ CY C GH+ C CYNC + GH ++ C S C+ C +GH +
Sbjct: 121 VRYQALECYQCHQLGHMMTTC---PQTRCYNCGTFGHSSQIC--HSKPHCFHCSHSGHRS 175
Query: 112 KECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
ECP ++ G+ CY C GH + +C
Sbjct: 176 SECPMRSKGR----------VCYQCNEPGHEAANC 200
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 67/156 (42%), Gaps = 24/156 (15%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC---ATESVTCYNC 62
T+ C NC GH + +CP+ I C C GH+ R+C A++ V
Sbjct: 42 TVVCDNCKTRGHLRRNCPK------------IKCNLCKRLGHYRRDCPQDASKRVRSVEG 89
Query: 63 SGQGHVAKDCTVKSSIICYNCNSSGHFARNCP-NDSSKRCYACHQAGHMAKECPGQ---- 117
+ V D + S+ C +C SS H NCP + CY CHQ GHM CP
Sbjct: 90 APHEEVNLDEEYRWSV-CRHCGSSRHIQANCPVRYQALECYQCHQLGHMMTTCPQTRCYN 148
Query: 118 --TAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
T G S + + C+ C H GH S +C + K
Sbjct: 149 CGTFGHSSQ-ICHSKPHCFHCSHSGHRSSECPMRSK 183
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 50/116 (43%), Gaps = 18/116 (15%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES--VT 58
M++ +CYNC FGH C K C+ C++ GH + EC S
Sbjct: 138 MTTCPQTRCYNCGTFGHSSQICHSKPH-----------CFHCSHSGHRSSECPMRSKGRV 186
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
CY C+ GH A +C +C C+ GHF +CP C CH GH A C
Sbjct: 187 CYQCNEPGHEAANC--PQGQLCRMCHRPGHFVAHCPEVV---CNLCHVKGHTAGVC 237
>gi|58266946|ref|XP_570629.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57226862|gb|AAW43322.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 287
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 62/147 (42%), Gaps = 47/147 (31%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------ESVTCYNC 62
CYNC + GH +CPQ S D G CY C GH +C + C+ C
Sbjct: 137 CYNCREPGHESTNCPQPRSTD------GKQCYACGGVGHVKSDCPSMRGAFGPGQKCFKC 190
Query: 63 SGQGHVAKDCTVK----------------------------SSIICYNCNSSGHFARNC- 93
GH+A++CTV + + CY CN H AR+C
Sbjct: 191 GRPGHLARECTVPGFVGAFRGRGGFGGAFGGRPRPPINPDGTPVKCYRCNGENHLARDCL 250
Query: 94 -PND-----SSKRCYACHQAGHMAKEC 114
P D +SK+CY C + GH+A++C
Sbjct: 251 APRDEAAILASKKCYKCQETGHIARDC 277
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 58/133 (43%), Gaps = 25/133 (18%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCPN 95
C+KC N GH A C CYNC GH + +C S CY C GH +CP+
Sbjct: 117 CFKCGNLGHIAENCQAPGRLCYNCREPGHESTNCPQPRSTDGKQCYACGGVGHVKSDCPS 176
Query: 96 -----DSSKRCYACHQAGHMAKEC--PG------------QTAGKSPEPVVD---MSLTC 133
++C+ C + GH+A+EC PG G P P ++ + C
Sbjct: 177 MRGAFGPGQKCFKCGRPGHLARECTVPGFVGAFRGRGGFGGAFGGRPRPPINPDGTPVKC 236
Query: 134 YVCGHQGHLSYDC 146
Y C + HL+ DC
Sbjct: 237 YRCNGENHLARDC 249
>gi|401420364|ref|XP_003874671.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490907|emb|CBZ26171.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 566
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 16/110 (14%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
++CY C GH +CPQ CY C +GH ++ C ++ C++CS G
Sbjct: 126 LECYQCHQLGHIMTTCPQTR------------CYNCGTFGHSSQICHSKP-HCFHCSHSG 172
Query: 67 HVAKDCTVKSS-IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
H + +C ++S +CY CN GH A NCP + C CH+ GH CP
Sbjct: 173 HRSSECPMRSKGRVCYQCNEPGHEAANCPQ--GQLCRMCHRPGHFVAHCP 220
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 70/160 (43%), Gaps = 24/160 (15%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC---ATESVT 58
S+ + C NC GH + +CP+ I C CN GH+ R+C A++ V
Sbjct: 38 STAGAVVCNNCKTRGHLRRNCPK------------IKCNLCNRLGHYRRDCPQDASKRVR 85
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND-SSKRCYACHQAGHMAKECPGQ 117
+ + V D + S+ C NC SS H NCP + CY CHQ GH+ CP
Sbjct: 86 SVEGAPREEVNLDEEYRWSV-CRNCGSSRHIQANCPVRYQALECYQCHQLGHIMTTCPQT 144
Query: 118 ------TAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
T G S + + C+ C H GH S +C + K
Sbjct: 145 RCYNCGTFGHSSQ-ICHSKPHCFHCSHSGHRSSECPMRSK 183
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 30/155 (19%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARG------DKVGI-------VCYKCNNYGHFARECA 53
I+C C GHY+ CPQ +S R ++V + VC C + H C
Sbjct: 61 IKCNLCNRLGHYRRDCPQDASKRVRSVEGAPREEVNLDEEYRWSVCRNCGSSRHIQANCP 120
Query: 54 T--ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMA 111
+++ CY C GH+ C CYNC + GH ++ C S C+ C +GH +
Sbjct: 121 VRYQALECYQCHQLGHIMTTC---PQTRCYNCGTFGHSSQIC--HSKPHCFHCSHSGHRS 175
Query: 112 KECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
ECP ++ G+ CY C GH + +C
Sbjct: 176 SECPMRSKGR----------VCYQCNEPGHEAANC 200
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 50/116 (43%), Gaps = 18/116 (15%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES--VT 58
M++ +CYNC FGH C K C+ C++ GH + EC S
Sbjct: 138 MTTCPQTRCYNCGTFGHSSQICHSKPH-----------CFHCSHSGHRSSECPMRSKGRV 186
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
CY C+ GH A +C +C C+ GHF +CP C CH GH A C
Sbjct: 187 CYQCNEPGHEAANC--PQGQLCRMCHRPGHFVAHCPEVV---CNLCHVKGHTAGVC 237
>gi|327297590|ref|XP_003233489.1| zinc knuckle domain-containing protein [Trichophyton rubrum CBS
118892]
gi|326464795|gb|EGD90248.1| zinc knuckle domain-containing protein [Trichophyton rubrum CBS
118892]
Length = 190
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 64/145 (44%), Gaps = 29/145 (20%)
Query: 36 GIVCYKCNNYGHFARECATESV-TCYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARNC 93
G C+ C H AR+C + TCYNC GQGHV+++CT CY C +GH +R C
Sbjct: 7 GRGCFNCGESSHQARDCPKKGTPTCYNCGGQGHVSRECTQPPKEKSCYRCGMTGHISREC 66
Query: 94 PNDSS---------------KRCYACHQAGHMAKECPGQ------------TAGKSPEPV 126
P+ S + CY C Q GH+A+ C Q +G
Sbjct: 67 PSSGSGDNNYSGGYSGGSGGQECYKCGQVGHIARNCSQQGGSGYGGGYGNSGSGSYSGGY 126
Query: 127 VDMSLTCYVCGHQGHLSYDCKLVQK 151
S TCY CG GH++ C QK
Sbjct: 127 GGRSQTCYSCGGYGHMARGCTQGQK 151
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 58/139 (41%), Gaps = 34/139 (24%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV------CYKCNNYGHFARECATE------- 55
CY C GH CP S D CYKC GH AR C+ +
Sbjct: 53 CYRCGMTGHISRECPSSGSGDNNYSGGYSGGSGGQECYKCGQVGHIARNCSQQGGSGYGG 112
Query: 56 -----------------SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS- 97
S TCY+C G GH+A+ CT CYNC GH +R+CP ++
Sbjct: 113 GYGNSGSGSYSGGYGGRSQTCYSCGGYGHMARGCT--QGQKCYNCGEVGHVSRDCPTEAK 170
Query: 98 -SKRCYACHQAGHMAKECP 115
+ CY C QAGH+ CP
Sbjct: 171 GERVCYKCKQAGHVQAACP 189
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 70/188 (37%), Gaps = 62/188 (32%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA--TESVTCYN 61
+S C+NC + H CP+K + CY C GH +REC + +CY
Sbjct: 5 SSGRGCFNCGESSHQARDCPKKGTP---------TCYNCGGQGHVSRECTQPPKEKSCYR 55
Query: 62 CSGQGHVAKDCTVKSS---------------IICYNCNSSGHFARNCPNDS--------- 97
C GH++++C S CY C GH ARNC
Sbjct: 56 CGMTGHISRECPSSGSGDNNYSGGYSGGSGGQECYKCGQVGHIARNCSQQGGSGYGGGYG 115
Query: 98 --------------SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLS 143
S+ CY+C GHMA+ C T G+ CY CG GH+S
Sbjct: 116 NSGSGSYSGGYGGRSQTCYSCGGYGHMARGC---TQGQK----------CYNCGEVGHVS 162
Query: 144 YDCKLVQK 151
DC K
Sbjct: 163 RDCPTEAK 170
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 45/104 (43%), Gaps = 17/104 (16%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGI--------------VCYKCNNYGHFARECA 53
+CY C GH +C Q+ + G CY C YGH AR C
Sbjct: 88 ECYKCGQVGHIARNCSQQGGSGYGGGYGNSGSGSYSGGYGGRSQTCYSCGGYGHMARGC- 146
Query: 54 TESVTCYNCSGQGHVAKDC--TVKSSIICYNCNSSGHFARNCPN 95
T+ CYNC GHV++DC K +CY C +GH CPN
Sbjct: 147 TQGQKCYNCGEVGHVSRDCPTEAKGERVCYKCKQAGHVQAACPN 190
>gi|296083796|emb|CBI24013.3| unnamed protein product [Vitis vinifera]
Length = 450
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
+C KC GHF+R+C +V C NC GH+ +C S+ IC+NC SGH A CPND
Sbjct: 151 LCNKCKRLGHFSRDCPNVTV-CNNCGLPGHIVTEC--NSTTICWNCKESGHLASQCPNDP 207
Query: 98 SKRCYACHQAGHMAKEC 114
C+ C + GH+A +C
Sbjct: 208 V--CHMCGKMGHLAWDC 222
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 30/85 (35%)
Query: 79 ICYNCNSSGHFARNCPN-----------------DSSKRCYACHQAGHMAKECPGQTAGK 121
+C C GHF+R+CPN +S+ C+ C ++GH+A +CP
Sbjct: 151 LCNKCKRLGHFSRDCPNVTVCNNCGLPGHIVTECNSTTICWNCKESGHLASQCPN----- 205
Query: 122 SPEPVVDMSLTCYVCGHQGHLSYDC 146
+PV C++CG GHL++DC
Sbjct: 206 --DPV------CHMCGKMGHLAWDC 222
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 9/73 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV--------CYKCNNYGHFARECATESVTCY 60
C C GH+ CP + + G IV C+ C GH A +C + V C+
Sbjct: 152 CNKCKRLGHFSRDCPNVTVCNNCGLPGHIVTECNSTTICWNCKESGHLASQCPNDPV-CH 210
Query: 61 NCSGQGHVAKDCT 73
C GH+A DC+
Sbjct: 211 MCGKMGHLAWDCS 223
>gi|327348756|gb|EGE77613.1| zinc knuckle transcription factor [Ajellomyces dermatitidis ATCC
18188]
Length = 485
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 73/164 (44%), Gaps = 36/164 (21%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC GH +CP + S KV + C CN GH R+C + V +C NC
Sbjct: 256 KCGNCGQMGHGPRACPDERSVVE---KVEVKCVNCNGIGHRVRDCTEKRVDKFSCRNCGQ 312
Query: 65 QGHVAKDCTVKSS---IICYNCNSS-------------------GHFARNCPNDSSKRCY 102
GH + +CT S + C CN GHFA++CP SS+ C
Sbjct: 313 PGHRSSECTEPRSAEGVECKKCNEGKPDDALRCTWGKLLTFSIVGHFAKDCPQSSSRACR 372
Query: 103 ACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C++ GH++KEC +P ++TC C GH S DC
Sbjct: 373 NCNEEGHISKEC--------DKPRNPDTVTCRNCEEVGHFSRDC 408
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 62/135 (45%), Gaps = 32/135 (23%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNN-------------------YGHFA 49
C NC GH C + SA+ G+ C KCN GHFA
Sbjct: 307 CRNCGQPGHRSSECTEPRSAE------GVECKKCNEGKPDDALRCTWGKLLTFSIVGHFA 360
Query: 50 RECA-TESVTCYNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNC--PNDSSK-RCY 102
++C + S C NC+ +GH++K+C ++ C NC GHF+R+C D SK +C
Sbjct: 361 KDCPQSSSRACRNCNEEGHISKECDKPRNPDTVTCRNCEEVGHFSRDCTKKKDWSKVQCN 420
Query: 103 ACHQAGHMAKECPGQ 117
C + GH + CP Q
Sbjct: 421 NCKEMGHTIRRCPKQ 435
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 50/121 (41%), Gaps = 17/121 (14%)
Query: 35 VGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTV--KSSIICYNCNSSGHFARN 92
V + Y ++G E + C NC GH A+DCT K++ C+NC GH
Sbjct: 20 VEQIGYDVGDFGE--NEVGGKDDACRNCGQSGHFARDCTEPRKATGACFNCGEEGHNKAE 77
Query: 93 C--PNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
C P C C + GH A ECP + A C C +GH + +C +
Sbjct: 78 CTKPRVFKGHCRICEKEGHPASECPEKPAD-----------VCKNCKEEGHKTMECTQNR 126
Query: 151 K 151
K
Sbjct: 127 K 127
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 16/112 (14%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CYNCSGQ 65
C NC GH+ C + A C+ C GH EC V C C +
Sbjct: 42 CRNCGQSGHFARDCTEPRKATG-------ACFNCGEEGHNKAECTKPRVFKGHCRICEKE 94
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
GH A +C K + +C NC GH C + R + H H+ + P Q
Sbjct: 95 GHPASECPEKPADVCKNCKEEGHKTMEC---TQNRKFDQH---HIPDKLPEQ 140
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE----SVTC 59
+S+ C NC + GH C + + D + C C GHF+R+C + V C
Sbjct: 366 SSSRACRNCNEEGHISKECDKPRNPDT------VTCRNCEEVGHFSRDCTKKKDWSKVQC 419
Query: 60 YNCSGQGHVAKDC 72
NC GH + C
Sbjct: 420 NNCKEMGHTIRRC 432
>gi|400598610|gb|EJP66319.1| cellular nucleic acid-binding protein [Beauveria bassiana ARSEF
2860]
Length = 446
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT---ESVTC 59
T +C NC + GH C Q+ + G+ CY C GH R+C + C
Sbjct: 222 DTGKPKCTNCDELGHIAKQCTQEKVV---REAKGLSCYNCGADGHRIRDCTEPRKDRFAC 278
Query: 60 YNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
NC GH + DC + ++ C C +GHFA++CP + C C Q GH A +C
Sbjct: 279 RNCGKSGHKSVDCEEEPNLDNVTCRKCEETGHFAKDCPKGGGRGCRNCGQEGHFAADC-- 336
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
P +D ++ C C GH S DC
Sbjct: 337 -----DQPPNLD-NVQCRNCEKTGHFSRDC 360
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 55/121 (45%), Gaps = 13/121 (10%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQ-GH 67
C NC GH C ++ + D + C KC GHFA++C GQ GH
Sbjct: 278 CRNCGKSGHKSVDCEEEPNLD------NVTCRKCEETGHFAKDCPKGGGRGCRNCGQEGH 331
Query: 68 VAKDCTVK---SSIICYNCNSSGHFARNCPN--DSSK-RCYACHQAGHMAKECPGQTAGK 121
A DC ++ C NC +GHF+R+CP D SK +C C + GH C A +
Sbjct: 332 FAADCDQPPNLDNVQCRNCEKTGHFSRDCPEPKDWSKVKCSNCQEFGHTKVRCKQPPAEQ 391
Query: 122 S 122
S
Sbjct: 392 S 392
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
C++C GH +CPN + C C + GHMAKECP K P ++C CG +
Sbjct: 37 CFSCGEEGHRKFDCPNAAPMTCRYCKEPGHMAKECP----TKPP-------MSCDNCGEE 85
Query: 140 GHLSYDCKLVQK 151
GHL DC +K
Sbjct: 86 GHLRKDCTNARK 97
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE-SVTCYNCSGQG 66
+C++C + GH ++ CP + + C C GH A+EC T+ ++C NC +G
Sbjct: 36 KCFSCGEEGHRKFDCPNAAP---------MTCRYCKEPGHMAKECPTKPPMSCDNCGEEG 86
Query: 67 HVAKDCTVKSSI 78
H+ KDCT I
Sbjct: 87 HLRKDCTNARKI 98
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
Query: 39 CYKCNNYGHFARECATES-VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
C+ C GH +C + +TC C GH+AK+C K + C NC GH ++C N
Sbjct: 37 CFSCGEEGHRKFDCPNAAPMTCRYCKEPGHMAKECPTKPPMSCDNCGEEGHLRKDCTNAR 96
Query: 98 S-KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSY 144
R A +A + + A + + YV G +++
Sbjct: 97 KIDRSGVADMAAELAWDMIKRAAAEQDANDAKEGIQAYVKALNGGITF 144
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 33/85 (38%), Gaps = 15/85 (17%)
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSSKR------CYACHQAGHMAKECPGQTAGKS 122
A D C NC+ GH A+ C + R CY C GH ++C
Sbjct: 217 AGDVVDTGKPKCTNCDELGHIAKQCTQEKVVREAKGLSCYNCGADGHRIRDCT------- 269
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDCK 147
EP D C CG GH S DC+
Sbjct: 270 -EPRKDR-FACRNCGKSGHKSVDCE 292
>gi|300176386|emb|CBK23697.2| unnamed protein product [Blastocystis hominis]
Length = 221
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 55/123 (44%), Gaps = 15/123 (12%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGI----------VCYKCNNYGHFARE 51
S+ I C C GH +CP++ R + CY+C GH AR+
Sbjct: 101 SAADQIICRACHKPGHIARNCPERPPRAERREGARPRRFRRFVPYNTCYRCLQPGHLARD 160
Query: 52 CATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMA 111
C E + C C GH A++C K+ +CY C SGH + CPN CY C Q GH
Sbjct: 161 CQNE-IVCSRCEQPGHKAREC--KNEPVCYRCKQSGHISSACPNPIV--CYKCGQPGHKR 215
Query: 112 KEC 114
EC
Sbjct: 216 SEC 218
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 56/130 (43%), Gaps = 37/130 (28%)
Query: 37 IVCYKCNNYGHFARECATESV--------------------TCYNCSGQGHVAKDCTVKS 76
I+C C+ GH AR C TCY C GH+A+DC ++
Sbjct: 106 IICRACHKPGHIARNCPERPPRAERREGARPRRFRRFVPYNTCYRCLQPGHLARDC--QN 163
Query: 77 SIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVC 136
I+C C GH AR C N+ CY C Q+GH++ CP P+V CY C
Sbjct: 164 EIVCSRCEQPGHKARECKNEPV--CYRCKQSGHISSACPN--------PIV-----CYKC 208
Query: 137 GHQGHLSYDC 146
G GH +C
Sbjct: 209 GQPGHKRSEC 218
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 9/73 (12%)
Query: 9 CYNCFDFGHYQYSCP--------QKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
CY C GH C ++ AR K VCY+C GH + C + CY
Sbjct: 148 CYRCLQPGHLARDCQNEIVCSRCEQPGHKARECKNEPVCYRCKQSGHISSACPN-PIVCY 206
Query: 61 NCSGQGHVAKDCT 73
C GH +CT
Sbjct: 207 KCGQPGHKRSECT 219
>gi|406867883|gb|EKD20920.1| zinc knuckle protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 198
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 70/183 (38%), Gaps = 67/183 (36%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQG 66
CYNC D H CP + A CY C GH +REC + TCY C G
Sbjct: 13 CYNCGDASHQARDCPTRGPAK---------CYNCGGEGHMSRECPDGPKDKTCYKCGQPG 63
Query: 67 HVAKDCTVKSSII---------------CYNCNSSGHFARNCPN---------------- 95
H+++DCT SS CY C+ GH ARNCP
Sbjct: 64 HISRDCTNPSSDGAGRGGFGGQGGGSQECYKCSKIGHIARNCPEAGGYGGGGYGGQSGYG 123
Query: 96 ------------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLS 143
+ CY+C GHM+++C T G+ CY CG GHLS
Sbjct: 124 GGQGGYGGGGRAQGGQTCYSCGGYGHMSRDC---TQGQK----------CYNCGEVGHLS 170
Query: 144 YDC 146
DC
Sbjct: 171 RDC 173
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 57/144 (39%), Gaps = 39/144 (27%)
Query: 9 CYNCFDFGHYQYSCPQKSS------ADARGDKVGIVCYKCNNYGHFARECAT-------- 54
CY C GH C SS CYKC+ GH AR C
Sbjct: 56 CYKCGQPGHISRDCTNPSSDGAGRGGFGGQGGGSQECYKCSKIGHIARNCPEAGGYGGGG 115
Query: 55 ---------------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
TCY+C G GH+++DCT CYNC GH +R+C
Sbjct: 116 YGGQSGYGGGQGGYGGGGRAQGGQTCYSCGGYGHMSRDCT--QGQKCYNCGEVGHLSRDC 173
Query: 94 P--NDSSKRCYACHQAGHMAKECP 115
P N++ + CY C Q GH+ +CP
Sbjct: 174 PSENNNERTCYKCKQPGHVQAQCP 197
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 70/188 (37%), Gaps = 63/188 (33%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----- 57
+ +CYNC GH CP D DK CYKC GH +R+C S
Sbjct: 28 TRGPAKCYNCGGEGHMSRECP-----DGPKDK---TCYKCGQPGHISRDCTNPSSDGAGR 79
Query: 58 -----------TCYNCSGQGHVAKDCT----------------------------VKSSI 78
CY CS GH+A++C +
Sbjct: 80 GGFGGQGGGSQECYKCSKIGHIARNCPEAGGYGGGGYGGQSGYGGGQGGYGGGGRAQGGQ 139
Query: 79 ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGH 138
CY+C GH +R+C ++CY C + GH++++CP + + TCY C
Sbjct: 140 TCYSCGGYGHMSRDC--TQGQKCYNCGEVGHLSRDCPSEN---------NNERTCYKCKQ 188
Query: 139 QGHLSYDC 146
GH+ C
Sbjct: 189 PGHVQAQC 196
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 53 ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN-DSSKRCYACHQAGHMA 111
A CYNC H A+DC + CYNC GH +R CP+ K CY C Q GH++
Sbjct: 7 APPPRGCYNCGDASHQARDCPTRGPAKCYNCGGEGHMSRECPDGPKDKTCYKCGQPGHIS 66
Query: 112 KECPGQTAG----KSPEPVVDMSLTCYVCGHQGHLSYDC 146
++C ++ S CY C GH++ +C
Sbjct: 67 RDCTNPSSDGAGRGGFGGQGGGSQECYKCSKIGHIARNC 105
>gi|406863952|gb|EKD16998.1| zinc knuckle protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 545
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 61/143 (42%), Gaps = 23/143 (16%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT---ESVTCYNCSG 64
+C NC GH Q +CPQ + + CY C GH R+C + C NC
Sbjct: 352 KCGNCDGLGHTQRNCPQDK---VEKEHTVVKCYNCEETGHRIRDCPNPRPDKFACRNCKQ 408
Query: 65 QGHVAKDCTVKSS---IICYNCNSSGHFARNCPN---DSSKRCYACHQAGHMAKECPGQT 118
GH +K+C+ S + C CN GHF+R CP S+ C+ C Q GH +C
Sbjct: 409 SGHSSKECSEPRSAEGVECKKCNEVGHFSRECPQGGGGGSRACHNCGQEGHSKNDC---- 464
Query: 119 AGKSPEPVVDMSLTCYVCGHQGH 141
+ L C C QGH
Sbjct: 465 -------TNERVLICRNCDAQGH 480
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE----SVTCYNCSG 64
C NC GH C + SA+ G+ C KCN GHF+REC S C+NC
Sbjct: 403 CRNCKQSGHSSKECSEPRSAE------GVECKKCNEVGHFSRECPQGGGGGSRACHNCGQ 456
Query: 65 QGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
+GH DCT + +IC NC++ GH + S +C C Q GH C
Sbjct: 457 EGHSKNDCTNERVLICRNCDAQGHECSKPRDYSRVKCSNCDQMGHTKVRC 506
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 38/86 (44%), Gaps = 14/86 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------TCYNC 62
C+NC GH + CPQ + RG C+ C GH +C +V TC C
Sbjct: 136 CFNCGQEGHMKSDCPQPPKS--RG------CFNCGEEGHSKADCPNPAVAREFTGTCRVC 187
Query: 63 SGQGHVAKDCTVKSSIICYNCNSSGH 88
QGH A DC K +C NC GH
Sbjct: 188 EQQGHRAADCPSKPPTVCKNCQEEGH 213
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-TCYN 61
S ++C C + GH+ CPQ +R C+ C GH +C E V C N
Sbjct: 421 SAEGVECKKCNEVGHFSRECPQGGGGGSR------ACHNCGQEGHSKNDCTNERVLICRN 474
Query: 62 CSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
C QGH S + C NC+ GH C
Sbjct: 475 CDAQGHECSKPRDYSRVKCSNCDQMGHTKVRC 506
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 59 CYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARNCPNDSSKR-----CYACHQAGHMAK 112
C+NC +GH+ DC S C+NC GH +CPN + R C C Q GH A
Sbjct: 136 CFNCGQEGHMKSDCPQPPKSRGCFNCGEEGHSKADCPNPAVAREFTGTCRVCEQQGHRAA 195
Query: 113 ECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
+CP S P V C C +GH C +K
Sbjct: 196 DCP------SKPPTV-----CKNCQEEGHEVVVCDKPRK 223
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Query: 39 CYKCNNYGHFARECA--TESVTCYNCSGQGHVAKDCTVKS-----SIICYNCNSSGHFAR 91
C+ C GH +C +S C+NC +GH DC + + C C GH A
Sbjct: 136 CFNCGQEGHMKSDCPQPPKSRGCFNCGEEGHSKADCPNPAVAREFTGTCRVCEQQGHRAA 195
Query: 92 NCPNDSSKRCYACHQAGH 109
+CP+ C C + GH
Sbjct: 196 DCPSKPPTVCKNCQEEGH 213
>gi|405120098|gb|AFR94869.1| zinc-finger protein GIS2 [Cryptococcus neoformans var. grubii H99]
Length = 184
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 62/147 (42%), Gaps = 47/147 (31%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------ESVTCYNC 62
CYNC + GH +CPQ S D G CY C GH +C + C+ C
Sbjct: 34 CYNCREPGHESTNCPQPRSTD------GKQCYACGGVGHVKSDCPSMRGAFGPGQKCFKC 87
Query: 63 SGQGHVAKDCTVK----------------------------SSIICYNCNSSGHFARNC- 93
GH+A++CTV + + CY CN H AR+C
Sbjct: 88 GRPGHLARECTVPGFVGAFRGRGGFGGAFGGRPRPPINPDGTPVKCYRCNGENHLARDCL 147
Query: 94 -PND-----SSKRCYACHQAGHMAKEC 114
P D +SK+CY C + GH+A++C
Sbjct: 148 APRDEAAILASKKCYKCQETGHIARDC 174
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 58/133 (43%), Gaps = 25/133 (18%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCPN 95
C+KC N GH A C CYNC GH + +C S CY C GH +CP+
Sbjct: 14 CFKCGNLGHIAENCQAPGRLCYNCREPGHESTNCPQPRSTDGKQCYACGGVGHVKSDCPS 73
Query: 96 -----DSSKRCYACHQAGHMAKEC--PG------------QTAGKSPEPVVD---MSLTC 133
++C+ C + GH+A+EC PG G P P ++ + C
Sbjct: 74 MRGAFGPGQKCFKCGRPGHLARECTVPGFVGAFRGRGGFGGAFGGRPRPPINPDGTPVKC 133
Query: 134 YVCGHQGHLSYDC 146
Y C + HL+ DC
Sbjct: 134 YRCNGENHLARDC 146
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 50/127 (39%), Gaps = 40/127 (31%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE------- 55
ST QCY C GH + CP A G K C+KC GH AREC
Sbjct: 52 STDGKQCYACGGVGHVKSDCPSMRGAFGPGQK----CFKCGRPGHLARECTVPGFVGAFR 107
Query: 56 ----------------------SVTCYNCSGQGHVAKDC-------TVKSSIICYNCNSS 86
V CY C+G+ H+A+DC + +S CY C +
Sbjct: 108 GRGGFGGAFGGRPRPPINPDGTPVKCYRCNGENHLARDCLAPRDEAAILASKKCYKCQET 167
Query: 87 GHFARNC 93
GH AR+C
Sbjct: 168 GHIARDC 174
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 8/49 (16%)
Query: 33 DKVGIVCYKCNNYGHFARECATE--------SVTCYNCSGQGHVAKDCT 73
D + CY+CN H AR+C S CY C GH+A+DCT
Sbjct: 127 DGTPVKCYRCNGENHLARDCLAPRDEAAILASKKCYKCQETGHIARDCT 175
>gi|118484500|gb|ABK94125.1| unknown [Populus trichocarpa]
Length = 158
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 59/120 (49%), Gaps = 17/120 (14%)
Query: 38 VCYKCNNYGHFARECATESV------TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFAR 91
+C+ C GH A+EC + C NC QGH+A DCT + C NC +GH AR
Sbjct: 10 ICHTCGKAGHRAKECTAPPMPPGDLRLCNNCYKQGHIAADCTNDKA--CNNCRKTGHLAR 67
Query: 92 NCPNDSSKRCYACHQAGHMAKECP-----GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CPN+ C C+ AGH+A++CP G G D + C C GH+S DC
Sbjct: 68 ECPNEPI--CNMCNVAGHVARQCPKSNMLGDRGGMRSGGYQD--IVCRNCHQYGHMSRDC 123
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 65/154 (42%), Gaps = 37/154 (24%)
Query: 9 CYNCFDFGHYQYSC--PQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
C+ C GH C P D R +C C GH A +C T C NC G
Sbjct: 11 CHTCGKAGHRAKECTAPPMPPGDLR------LCNNCYKQGHIAADC-TNDKACNNCRKTG 63
Query: 67 HVAKDCTVKSSIICYNCNSSGHFARNCP--NDSSKR------------CYACHQAGHMAK 112
H+A++C + IC CN +GH AR CP N R C CHQ GHM++
Sbjct: 64 HLARECP--NEPICNMCNVAGHVARQCPKSNMLGDRGGMRSGGYQDIVCRNCHQYGHMSR 121
Query: 113 ECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+C G + C+ CG +GH + +C
Sbjct: 122 DCMGPL------------MICHNCGGRGHRAIEC 143
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 58/139 (41%), Gaps = 28/139 (20%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
M C NC+ GH +AD DK C C GH AREC E + C
Sbjct: 29 MPPGDLRLCNNCYKQGHI--------AADCTNDKA---CNNCRKTGHLARECPNEPI-CN 76
Query: 61 NCSGQGHVAKDCTVKS--------------SIICYNCNSSGHFARNCPNDSSKRCYACHQ 106
C+ GHVA+ C + I+C NC+ GH +R+C C+ C
Sbjct: 77 MCNVAGHVARQCPKSNMLGDRGGMRSGGYQDIVCRNCHQYGHMSRDC-MGPLMICHNCGG 135
Query: 107 AGHMAKECP-GQTAGKSPE 124
GH A ECP G+ + P+
Sbjct: 136 RGHRAIECPSGRMMDRYPQ 154
>gi|343417191|emb|CCD20113.1| nucleic acid binding protein, putative [Trypanosoma vivax Y486]
Length = 502
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 30/144 (20%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQ 65
+++C+ C GH CPQ C+ C ++GH ++ CA + C++ S
Sbjct: 75 SVECFQCHQKGHMMPMCPQTR------------CFNCGHFGHSSQLCAKKRA-CFHFSMP 121
Query: 66 GHVAKDCTVKS-SIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPE 124
GH + +CT K +CY C GH CP S RC+ C+Q GH+ +CP
Sbjct: 122 GHTSTECTRKDMGRLCYRCKEPGHDMAKCPQ--SPRCHMCNQTGHLVAQCP--------- 170
Query: 125 PVVDMSLTCYVCGHQGHLSYDCKL 148
+ C C +GH++ CK+
Sbjct: 171 -----EVLCNRCHQKGHMASACKM 189
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 17/154 (11%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA--TESVTCYNCSG 64
I+C C GH++ CP + + +GI C C + H +C +SV C+ C
Sbjct: 25 IECAACSRLGHFKEDCPHRRKRPRADNDIGI-CRSCGSSSHAQAKCPERIKSVECFQCHQ 83
Query: 65 QGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKS-- 122
+GH+ C C+NC GH ++ C + C+ GH + EC + G+
Sbjct: 84 KGHMMPMC---PQTRCFNCGHFGHSSQLCAK--KRACFHFSMPGHTSTECTRKDMGRLCY 138
Query: 123 --PEPVVDM-----SLTCYVCGHQGHLSYDCKLV 149
EP DM S C++C GHL C V
Sbjct: 139 RCKEPGHDMAKCPQSPRCHMCNQTGHLVAQCPEV 172
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 56/148 (37%), Gaps = 41/148 (27%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
M + ST C NC GH + CP I C C+ GHF +C
Sbjct: 1 MKNISTDTCKNCLSTGHLRRDCPL------------IECAACSRLGHFKEDCP------- 41
Query: 61 NCSGQGHVAKDCTVKSSI-ICYNCNSSGHFARNCPND-SSKRCYACHQAGHMAKECPGQT 118
H K + I IC +C SS H CP S C+ CHQ GHM CP QT
Sbjct: 42 ------HRRKRPRADNDIGICRSCGSSSHAQAKCPERIKSVECFQCHQKGHMMPMCP-QT 94
Query: 119 AGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C+ CGH GH S C
Sbjct: 95 -------------RCFNCGHFGHSSQLC 109
>gi|304434516|dbj|BAJ15435.1| VASA-like gene [Mytilus galloprovincialis]
Length = 745
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 17/94 (18%)
Query: 39 CYKCNNYGHFARECAT--------ESVTCYNCSGQGHVAKDC-------TVKSSIICYNC 83
C+KC GH +REC + + C+ C+ GH+A++C S C+ C
Sbjct: 148 CFKCGESGHMSRECPSAEQGGGGGGNRNCFKCNESGHMARECPNAEQGGGGGRSGNCFKC 207
Query: 84 NSSGHFARNCPNDSSK--RCYACHQAGHMAKECP 115
SGH AR+CPN SK C+ C++ GHMA++CP
Sbjct: 208 QESGHMARDCPNSDSKGNACFKCNEGGHMARDCP 241
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 11/74 (14%)
Query: 80 CYNCNSSGHFARNCPN-------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLT 132
C+ C SGH +R CP+ ++ C+ C+++GHMA+ECP G S
Sbjct: 148 CFKCGESGHMSRECPSAEQGGGGGGNRNCFKCNESGHMARECPNAEQGGG----GGRSGN 203
Query: 133 CYVCGHQGHLSYDC 146
C+ C GH++ DC
Sbjct: 204 CFKCQESGHMARDC 217
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 7/44 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC 52
C+ C + GH CP ++D++G+ C+KCN GH AR+C
Sbjct: 204 CFKCQESGHMARDCP---NSDSKGN----ACFKCNEGGHMARDC 240
>gi|258569739|ref|XP_002543673.1| zinc finger CCHC domain-containing protein 13 [Uncinocarpus reesii
1704]
gi|237903943|gb|EEP78344.1| zinc finger CCHC domain-containing protein 13 [Uncinocarpus reesii
1704]
Length = 170
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 56/129 (43%), Gaps = 27/129 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES------------ 56
CY C GH CPQ + G+ CYKC GH AR C+ +
Sbjct: 46 CYRCGLTGHISRDCPQGGES---GETRSQECYKCGQVGHIARNCSQNTGYNNSGYGAGSY 102
Query: 57 --------VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND--SSKRCYACHQ 106
TCY+C G GH+A+DCT CYNC GH +R C + + CY C Q
Sbjct: 103 GGGYGSRPQTCYSCGGYGHMARDCT--QGQKCYNCGEVGHVSRECTTEGKGERVCYKCKQ 160
Query: 107 AGHMAKECP 115
GH+ CP
Sbjct: 161 PGHVQAACP 169
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 69/172 (40%), Gaps = 45/172 (26%)
Query: 9 CYNCFDFGHYQYSCPQKSSA--------DARGDKVGIVCYKCNNYGHFARECA------- 53
C+NC D H CP+K S D CY+C GH +R+C
Sbjct: 8 CFNCGDSAHQARDCPKKGSLVCYNCGGRDCSEPAKEKSCYRCGLTGHISRDCPQGGESGE 67
Query: 54 TESVTCYNCSGQGHVAKDCTVKSSI-------------------ICYNCNSSGHFARNCP 94
T S CY C GH+A++C+ + CY+C GH AR+C
Sbjct: 68 TRSQECYKCGQVGHIARNCSQNTGYNNSGYGAGSYGGGYGSRPQTCYSCGGYGHMARDC- 126
Query: 95 NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++CY C + GH+++EC + G+ CY C GH+ C
Sbjct: 127 -TQGQKCYNCGEVGHVSRECTTEGKGE---------RVCYKCKQPGHVQAAC 168
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGI----------VCYKCNNYGHFAREC 52
T + +CY C GH +C Q + + G G CY C YGH AR+C
Sbjct: 67 ETRSQECYKCGQVGHIARNCSQNTGYNNSGYGAGSYGGGYGSRPQTCYSCGGYGHMARDC 126
Query: 53 ATESVTCYNCSGQGHVAKDCTV--KSSIICYNCNSSGHFARNCPN 95
T+ CYNC GHV+++CT K +CY C GH CPN
Sbjct: 127 -TQGQKCYNCGEVGHVSRECTTEGKGERVCYKCKQPGHVQAACPN 170
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 52/124 (41%), Gaps = 31/124 (25%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNS-----------------SGHFARNCPNDS---- 97
C+NC H A+DC K S++CYNC +GH +R+CP
Sbjct: 8 CFNCGDSAHQARDCPKKGSLVCYNCGGRDCSEPAKEKSCYRCGLTGHISRDCPQGGESGE 67
Query: 98 --SKRCYACHQAGHMAKECPGQTA--------GKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
S+ CY C Q GH+A+ C T G TCY CG GH++ DC
Sbjct: 68 TRSQECYKCGQVGHIARNCSQNTGYNNSGYGAGSYGGGYGSRPQTCYSCGGYGHMARDCT 127
Query: 148 LVQK 151
QK
Sbjct: 128 QGQK 131
>gi|134110726|ref|XP_775827.1| hypothetical protein CNBD2370 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258493|gb|EAL21180.1| hypothetical protein CNBD2370 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 184
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 62/147 (42%), Gaps = 47/147 (31%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------ESVTCYNC 62
CYNC + GH +CPQ S D G CY C GH +C + C+ C
Sbjct: 34 CYNCREPGHESTNCPQPRSTD------GKQCYACGGVGHVKSDCPSMRGAFGPGQKCFKC 87
Query: 63 SGQGHVAKDCTVK----------------------------SSIICYNCNSSGHFARNC- 93
GH+A++CTV + + CY CN H AR+C
Sbjct: 88 GRPGHLARECTVPGFVGAFRGRGGFGGAFGGRPRPPINPDGTPVKCYRCNGENHLARDCL 147
Query: 94 -PND-----SSKRCYACHQAGHMAKEC 114
P D +SK+CY C + GH+A++C
Sbjct: 148 APRDEAAILASKKCYKCQETGHIARDC 174
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 58/133 (43%), Gaps = 25/133 (18%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCPN 95
C+KC N GH A C CYNC GH + +C S CY C GH +CP+
Sbjct: 14 CFKCGNLGHIAENCQAPGRLCYNCREPGHESTNCPQPRSTDGKQCYACGGVGHVKSDCPS 73
Query: 96 -----DSSKRCYACHQAGHMAKEC--PG------------QTAGKSPEPVVD---MSLTC 133
++C+ C + GH+A+EC PG G P P ++ + C
Sbjct: 74 MRGAFGPGQKCFKCGRPGHLARECTVPGFVGAFRGRGGFGGAFGGRPRPPINPDGTPVKC 133
Query: 134 YVCGHQGHLSYDC 146
Y C + HL+ DC
Sbjct: 134 YRCNGENHLARDC 146
>gi|412987942|emb|CCO19338.1| dihydroxyacetone kinase [Bathycoccus prasinos]
Length = 1074
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 53/131 (40%), Gaps = 21/131 (16%)
Query: 9 CYNCFDFGHYQYSCPQ--------------KSSADARGDKVGIVCYKCNNYGHFARECAT 54
C C FGHY +CPQ + + R VC +C GH+AR+CA
Sbjct: 129 CRICGRFGHYARACPQNRGGGRGGRGGRGPRQPRERRAAGPEDVCNRCGQAGHWARDCAE 188
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
+ K C NCN GHFAR+CP +C C + GH +++C
Sbjct: 189 PD------TRTDEEKAPRAPKPGDKCRNCNEEGHFARDCPQPKDTKCRTCGEDGHYSRDC 242
Query: 115 PGQTAGKSPEP 125
P Q G P
Sbjct: 243 P-QKGGSGVTP 252
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 70/203 (34%), Gaps = 74/203 (36%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVG-IVCYKCNNYGHFARECATESV----- 57
+S +C C +FGH+ C + D+R + + C +C +GH AR CA+
Sbjct: 54 SSNDKCNRCGNFGHWARDC---ALPDSRAPPMNDMRCNRCGGFGHMARFCASADTRGFSG 110
Query: 58 -----------------TCYNCSGQGHVAKDCTVKSSI---------------------- 78
+C C GH A+ C
Sbjct: 111 GGRGGFSGGRGGGRGDDSCRICGRFGHYARACPQNRGGGRGGRGGRGPRQPRERRAAGPE 170
Query: 79 -ICYNCNSSGHFARNCPNDSSK--------------RCYACHQAGHMAKECPGQTAGKSP 123
+C C +GH+AR+C ++ +C C++ GH A++CP K
Sbjct: 171 DVCNRCGQAGHWARDCAEPDTRTDEEKAPRAPKPGDKCRNCNEEGHFARDCPQPKDTK-- 228
Query: 124 EPVVDMSLTCYVCGHQGHLSYDC 146
C CG GH S DC
Sbjct: 229 ---------CRTCGEDGHYSRDC 242
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 44/176 (25%), Positives = 62/176 (35%), Gaps = 63/176 (35%)
Query: 30 ARGDKVGIVCYKCNNYGHFARECA--------TESVTCYNCSGQGHVAKDCTVKSSII-- 79
ARG C +C N+GH+AR+CA + C C G GH+A+ C +
Sbjct: 50 ARGPSSNDKCNRCGNFGHWARDCALPDSRAPPMNDMRCNRCGGFGHMARFCASADTRGFS 109
Query: 80 -------------------CYNCNSSGHFARNCPNDSSKR-------------------- 100
C C GH+AR CP +
Sbjct: 110 GGGRGGFSGGRGGGRGDDSCRICGRFGHYARACPQNRGGGRGGRGGRGPRQPRERRAAGP 169
Query: 101 ---CYACHQAGHMAKECP-------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C C QAGH A++C + A ++P+P C C +GH + DC
Sbjct: 170 EDVCNRCGQAGHWARDCAEPDTRTDEEKAPRAPKP----GDKCRNCNEEGHFARDC 221
>gi|390365404|ref|XP_003730808.1| PREDICTED: uncharacterized protein LOC100889633, partial
[Strongylocentrotus purpuratus]
Length = 904
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 62/149 (41%), Gaps = 20/149 (13%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYN 61
S I+C+NC + GH + CP+ A C C GH R C + C+N
Sbjct: 361 SRQKHIRCHNCNEMGHLKSECPKPLHIPA--------CVLCGTRGHTDRNCPDQ--LCFN 410
Query: 62 CSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQT 118
CS GH ++ C VK I C C GH + CP D ++ + + G + +
Sbjct: 411 CSMPGHQSRACPVKRHIRYARCTRCQMQGHLRKMCP-DIWRQYHLTTEHGPIVRPTSQHH 469
Query: 119 AGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
K E L C C +GH YDC+
Sbjct: 470 RTKQKE------LYCSNCSKKGHRYYDCR 492
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 46 GHFARECATESVTCYNCSGQGHVAKDCTVKSSI-ICYNCNSSGHFARNCPNDSSKRCYAC 104
G + + + + C+NC+ GH+ +C I C C + GH RNCP+ + C+ C
Sbjct: 355 GRYFVQSRQKHIRCHNCNEMGHLKSECPKPLHIPACVLCGTRGHTDRNCPD---QLCFNC 411
Query: 105 HQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GH ++ CP + + C C QGHL C
Sbjct: 412 SMPGHQSRACPVKRHIRYAR--------CTRCQMQGHLRKMC 445
>gi|425774261|gb|EKV12574.1| hypothetical protein PDIG_43280 [Penicillium digitatum PHI26]
gi|425778540|gb|EKV16664.1| hypothetical protein PDIP_34510 [Penicillium digitatum Pd1]
Length = 185
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 56/134 (41%), Gaps = 30/134 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-------------- 54
CY C GH CPQ + CYKC GH AR C+
Sbjct: 54 CYRCGQTGHLSRECPQGGDGNYS-GGGSQECYKCGQVGHIARNCSQGGNYGGGYSTGGYG 112
Query: 55 -----------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS--SKRC 101
TCY+C G GH+A+DCT CYNC GH +R+CP ++ + C
Sbjct: 113 GGFGGPGGAGGRQQTCYSCGGFGHMARDCT--QGQKCYNCGEVGHVSRDCPTEAKGERMC 170
Query: 102 YACHQAGHMAKECP 115
Y C Q GH+ CP
Sbjct: 171 YKCKQPGHVQSACP 184
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS-SKRCYACHQAGHMAKECPGQ 117
C+NC H AKDC K + CYNCN GH +R C + K CY C Q GH+++ECP
Sbjct: 11 CFNCGEASHQAKDCPKKGNPTCYNCNGQGHLSRECQEPAKEKSCYRCGQTGHLSRECPQG 70
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G S CY CG GH++ +C
Sbjct: 71 GDGNY---SGGGSQECYKCGQVGHIARNC 96
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 62/136 (45%), Gaps = 23/136 (16%)
Query: 39 CYKCNNYGHFARECATE-SVTCYNCSGQGHVAKDCTVKS-SIICYNCNSSGHFARNCPN- 95
C+ C H A++C + + TCYNC+GQGH++++C + CY C +GH +R CP
Sbjct: 11 CFNCGEASHQAKDCPKKGNPTCYNCNGQGHLSRECQEPAKEKSCYRCGQTGHLSRECPQG 70
Query: 96 -------DSSKRCYACHQAGHMAKECP-------------GQTAGKSPEPVVDMSLTCYV 135
S+ CY C Q GH+A+ C P TCY
Sbjct: 71 GDGNYSGGGSQECYKCGQVGHIARNCSQGGNYGGGYSTGGYGGGFGGPGGAGGRQQTCYS 130
Query: 136 CGHQGHLSYDCKLVQK 151
CG GH++ DC QK
Sbjct: 131 CGGFGHMARDCTQGQK 146
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 69/177 (38%), Gaps = 56/177 (31%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQG 66
C+NC + H CP+K + CY CN GH +REC + +CY C G
Sbjct: 11 CFNCGEASHQAKDCPKKGNP---------TCYNCNGQGHLSRECQEPAKEKSCYRCGQTG 61
Query: 67 HVAKDCT--------VKSSIICYNCNSSGHFARNCPN----------------------- 95
H++++C S CY C GH ARNC
Sbjct: 62 HLSRECPQGGDGNYSGGGSQECYKCGQVGHIARNCSQGGNYGGGYSTGGYGGGFGGPGGA 121
Query: 96 -DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
+ CY+C GHMA++C T G+ CY CG GH+S DC K
Sbjct: 122 GGRQQTCYSCGGFGHMARDC---TQGQK----------CYNCGEVGHVSRDCPTEAK 165
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTV--KSSIICYNCNSSGHFARNCPN 95
CY C +GH AR+C T+ CYNC GHV++DC K +CY C GH CPN
Sbjct: 127 TCYSCGGFGHMARDC-TQGQKCYNCGEVGHVSRDCPTEAKGERMCYKCKQPGHVQSACPN 185
>gi|296811728|ref|XP_002846202.1| zinc knuckle domain-containing protein [Arthroderma otae CBS
113480]
gi|238843590|gb|EEQ33252.1| zinc knuckle domain-containing protein [Arthroderma otae CBS
113480]
Length = 191
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 57/124 (45%), Gaps = 29/124 (23%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADA------------------RGDKVG----IVCYK 41
S +CYNC GH +CP S A RG G CYK
Sbjct: 28 ASNARCYNCNIPGHLARNCPSGSMQQAPQGARNAGPARGGFNAGFRGGPAGYPRAATCYK 87
Query: 42 CNNYGHFARECATESVTCYNCSGQGHVAKDCTVKS-------SIICYNCNSSGHFARNCP 94
C HFAR+C +++ CY C GH+++DCT + +CY C+ +GH +R+CP
Sbjct: 88 CGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGGPLSTVGKVCYKCSQAGHISRDCP 147
Query: 95 NDSS 98
+++
Sbjct: 148 TNNT 151
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 61/146 (41%), Gaps = 25/146 (17%)
Query: 15 FGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT--------------CY 60
GH Q CP + G CY CN GH AR C + S+ +
Sbjct: 12 LGHVQADCP---TLRLNGGASNARCYNCNIPGHLARNCPSGSMQQAPQGARNAGPARGGF 68
Query: 61 NCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAG 120
N +G A + CY C HFAR+C + +CYAC + GH++++C G
Sbjct: 69 NAGFRGGPAG---YPRAATCYKCGGPNHFARDC-QAQAMKCYACGKLGHISRDCTAPNGG 124
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDC 146
P+ + CY C GH+S DC
Sbjct: 125 ----PLSTVGKVCYKCSQAGHISRDC 146
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 45/120 (37%), Gaps = 49/120 (40%)
Query: 64 GQGHVAKDCTV------KSSIICYNCNSSGHFARNCPNDSSKR----------------- 100
G GHV DC S+ CYNCN GH ARNCP+ S ++
Sbjct: 11 GLGHVQADCPTLRLNGGASNARCYNCNIPGHLARNCPSGSMQQAPQGARNAGPARGGFNA 70
Query: 101 --------------CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C H A++C Q ++ CY CG GH+S DC
Sbjct: 71 GFRGGPAGYPRAATCYKCGGPNHFARDCQAQ------------AMKCYACGKLGHISRDC 118
>gi|255954945|ref|XP_002568225.1| Pc21g11940 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589936|emb|CAP96091.1| Pc21g11940 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 232
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 62/156 (39%), Gaps = 27/156 (17%)
Query: 8 QCYNCFDFGHYQYSCPQ-KSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
QCYNC GH Q CP + + A G CY CN GH AR C + G
Sbjct: 37 QCYNCQGLGHVQADCPTLRLNGGANGR-----CYNCNQPGHLARNCTNPTAAGAGAPPTG 91
Query: 67 HVAKDCTV----------------KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
A + CY C HFAR+C + +CYAC + GH+
Sbjct: 92 PAAGRGAGARGGFQGGFRGGFSGYPRAATCYKCGGPNHFARDC-QAQAMKCYACGKLGHI 150
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+++C G P+ CY C GH+S DC
Sbjct: 151 SRDCTAPNGG----PLSSAGKVCYKCAQAGHISRDC 182
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 60/160 (37%), Gaps = 63/160 (39%)
Query: 38 VCYKCNNYGHFARECA-TESV---------TCYNCSGQGHVAKDCTV-----KSSIICYN 82
CYKC GH+A C+ TE + CYNC G GHV DC ++ CYN
Sbjct: 7 ACYKCGTIGHYAEVCSSTERLCYNCKQPAKQCYNCQGLGHVQADCPTLRLNGGANGRCYN 66
Query: 83 CNSSGHFARNCPNDS------------------------------------SKRCYACHQ 106
CN GH ARNC N + + CY C
Sbjct: 67 CNQPGHLARNCTNPTAAGAGAPPTGPAAGRGAGARGGFQGGFRGGFSGYPRAATCYKCGG 126
Query: 107 AGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
H A++C Q ++ CY CG GH+S DC
Sbjct: 127 PNHFARDCQAQ------------AMKCYACGKLGHISRDC 154
>gi|156720287|dbj|BAF76796.1| Vasa-related protein [Enchytraeus japonensis]
Length = 990
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 76/194 (39%), Gaps = 62/194 (31%)
Query: 9 CYNCFDFGHYQYSCPQ---------KSSADARGDKVGI--------------VCYKCNNY 45
C+NC GH CP+ D+R G+ CY C +
Sbjct: 271 CFNCGQDGHMSRDCPEPRRDRGAMPNDRGDSRRTNDGMRNDGMRGEGARGPRACYNCGSD 330
Query: 46 GHFARECATES----------VTCYNCSGQGHVAKDCTV----------KSSIICYNCNS 85
H +R+C CYNC +GH+ +DCT + C+NC S
Sbjct: 331 AHMSRDCPEPRKERSNDSRPLRACYNCGNEGHMTRDCTEPRKERSNENSRPPRACFNCGS 390
Query: 86 SGHFARNCP-------NDSSK---RCYACHQAGHMAKECP---GQTAGKSPEPVVDMSLT 132
H +R+CP ND+S+ C+ C HM++ECP + G P V
Sbjct: 391 EAHMSRDCPEPKKERPNDNSRPPRACFNCGSEAHMSRECPEPKKEREGGKPSGV------ 444
Query: 133 CYVCGHQGHLSYDC 146
C+ C +GH++ DC
Sbjct: 445 CFRCDLEGHMAKDC 458
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 64/184 (34%), Gaps = 42/184 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+NC GH CPQ S++ +++ C+NC GH+
Sbjct: 221 CFNCGQEGHGSRDCPQLSNSGGGNGGGAAGGVNGGGVAGRVSGGGSQNRGCFNCGQDGHM 280
Query: 69 AKDCT--------------------------------VKSSIICYNCNSSGHFARNCPND 96
++DC + CYNC S H +R+CP
Sbjct: 281 SRDCPEPRRDRGAMPNDRGDSRRTNDGMRNDGMRGEGARGPRACYNCGSDAHMSRDCPEP 340
Query: 97 SSKR---------CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+R CY C GHM ++C +S E C+ CG + H+S DC
Sbjct: 341 RKERSNDSRPLRACYNCGNEGHMTRDCTEPRKERSNENSRP-PRACFNCGSEAHMSRDCP 399
Query: 148 LVQK 151
+K
Sbjct: 400 EPKK 403
>gi|58267432|ref|XP_570872.1| DNA-binding protein hexbp [Cryptococcus neoformans var. neoformans
JEC21]
gi|134111917|ref|XP_775494.1| hypothetical protein CNBE2080 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258153|gb|EAL20847.1| hypothetical protein CNBE2080 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227106|gb|AAW43565.1| DNA-binding protein hexbp, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 204
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 57/137 (41%), Gaps = 22/137 (16%)
Query: 32 GDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFAR 91
G G C+KC GH A C E+ TCYNC GH++++C + CY C GH +
Sbjct: 3 GAPRGSSCFKCGQQGHVAAACPAEAPTCYNCGLSGHLSRECPQPKNKACYTCGQEGHLSS 62
Query: 92 NCPN----------DSSKRCYACHQAGHMAKECP------------GQTAGKSPEPVVDM 129
CP CY C + GH+A+ CP G
Sbjct: 63 ACPQGSGAGGFGGASGGGECYRCGKPGHIARMCPESGDAAAGGFGGAGGYGGFGGGAGFG 122
Query: 130 SLTCYVCGHQGHLSYDC 146
+ +CY CG GH+S +C
Sbjct: 123 NKSCYTCGGVGHISREC 139
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 58/144 (40%), Gaps = 38/144 (26%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV-CYKCNNYGHFARECATESV---------- 57
CY C GH +CPQ S A G G CY+C GH AR C
Sbjct: 51 CYTCGQEGHLSSACPQGSGAGGFGGASGGGECYRCGKPGHIARMCPESGDAAAGGFGGAG 110
Query: 58 --------------TCYNCSGQGHVAKDCTVKSSII-------------CYNCNSSGHFA 90
+CY C G GH++++C +S CYNC GH +
Sbjct: 111 GYGGFGGGAGFGNKSCYTCGGVGHISRECPSGASRGFGGGGGGFGGPRKCYNCGQDGHIS 170
Query: 91 RNCPNDSSKRCYACHQAGHMAKEC 114
R CP + K CY+C Q GH+A C
Sbjct: 171 RECPQEQGKTCYSCGQPGHIASAC 194
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 64/178 (35%), Gaps = 46/178 (25%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQGH 67
C+ C GH +CP ++ CY C GH +REC ++ CY C +GH
Sbjct: 10 CFKCGQQGHVAAACPAEAP----------TCYNCGLSGHLSRECPQPKNKACYTCGQEGH 59
Query: 68 VAKDCTVKSSII----------CYNCNSSGHFARNCPND--------------------- 96
++ C S CY C GH AR CP
Sbjct: 60 LSSACPQGSGAGGFGGASGGGECYRCGKPGHIARMCPESGDAAAGGFGGAGGYGGFGGGA 119
Query: 97 --SSKRCYACHQAGHMAKECP--GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
+K CY C GH+++ECP CY CG GH+S +C Q
Sbjct: 120 GFGNKSCYTCGGVGHISRECPSGASRGFGGGGGGFGGPRKCYNCGQDGHISRECPQEQ 177
>gi|345564451|gb|EGX47414.1| hypothetical protein AOL_s00083g507 [Arthrobotrys oligospora ATCC
24927]
Length = 196
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 74/174 (42%), Gaps = 54/174 (31%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT--ESVTCYNCSGQG 66
CYNC GH CP++ + VCY C GH +REC + + +CY C G
Sbjct: 21 CYNCGGSGHQAKDCPKRGNP---------VCYNCGQDGHLSRECQSPPKEKSCYRCGQTG 71
Query: 67 HVAKDCTVKSSII----------------CYNCNSSGHFARNC--------------PND 96
H++++CT +SS CY C GH ARNC +
Sbjct: 72 HISRECTNESSGSSYSGGNSGGAAGSGAECYKCGKVGHIARNCQSGDNGGFGGGNRYASG 131
Query: 97 SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
+ CY+C GHM+++C T G+ CY CG GHLS DC Q
Sbjct: 132 RGQTCYSCGGFGHMSRDC---TQGQK----------CYNCGQIGHLSRDCTSEQ 172
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN-DSSKRCYACHQAGHMAKECPG 116
+CYNC G GH AKDC + + +CYNC GH +R C + K CY C Q GH+++EC
Sbjct: 20 SCYNCGGSGHQAKDCPKRGNPVCYNCGQDGHLSRECQSPPKEKSCYRCGQTGHISRECTN 79
Query: 117 Q-----TAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ +G + CY CG GH++ +C+
Sbjct: 80 ESSGSSYSGGNSGGAAGSGAECYKCGKVGHIARNCQ 115
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 17/92 (18%)
Query: 39 CYKCNNYGHFARECAT---------------ESVTCYNCSGQGHVAKDCTVKSSIICYNC 83
CYKC GH AR C + TCY+C G GH+++DCT CYNC
Sbjct: 101 CYKCGKVGHIARNCQSGDNGGFGGGNRYASGRGQTCYSCGGFGHMSRDCTQGQK--CYNC 158
Query: 84 NSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
GH +R+C ++ + CY C + GH+ CP
Sbjct: 159 GQIGHLSRDCTSEQDRVCYKCKKPGHIMSNCP 190
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADAR-----GDKVGIVCYKCNNYGHFARECATESVTCYNC 62
+CY C GH +C + G CY C +GH +R+C T+ CYNC
Sbjct: 100 ECYKCGKVGHIARNCQSGDNGGFGGGNRYASGRGQTCYSCGGFGHMSRDC-TQGQKCYNC 158
Query: 63 SGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
GH+++DCT + +CY C GH NCP
Sbjct: 159 GQIGHLSRDCTSEQDRVCYKCKKPGHIMSNCP 190
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 21/134 (15%)
Query: 39 CYKCNNYGHFARECATE-SVTCYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNCPND 96
CY C GH A++C + CYNC GH++++C + CY C +GH +R C N+
Sbjct: 21 CYNCGGSGHQAKDCPKRGNPVCYNCGQDGHLSRECQSPPKEKSCYRCGQTGHISRECTNE 80
Query: 97 SSK----------------RCYACHQAGHMAKECPGQTAGKSPEP---VVDMSLTCYVCG 137
SS CY C + GH+A+ C G TCY CG
Sbjct: 81 SSGSSYSGGNSGGAAGSGAECYKCGKVGHIARNCQSGDNGGFGGGNRYASGRGQTCYSCG 140
Query: 138 HQGHLSYDCKLVQK 151
GH+S DC QK
Sbjct: 141 GFGHMSRDCTQGQK 154
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 11/55 (20%)
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
++ CY C +GH AK+CP K PV CY CG GHLS +C+ K
Sbjct: 18 NRSCYNCGGSGHQAKDCP-----KRGNPV------CYNCGQDGHLSRECQSPPKE 61
>gi|346318384|gb|EGX87987.1| zinc knuckle transcription factor (CnjB), putative [Cordyceps
militaris CM01]
Length = 487
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 69/165 (41%), Gaps = 37/165 (22%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT---ESVTCYNC-- 62
+C NC + GH CPQ+ R KV CY C+ GH R+C + C NC
Sbjct: 255 KCSNCDELGHIAKQCPQEKVV--REVKV-QTCYNCSGEGHRVRDCPEPRKDRFACRNCGY 311
Query: 63 ------------------SGQGHVAKDCTVK---SSIICYNCNSSGHFARNCPNDSSKRC 101
S GH A DC + ++ C C +GHFA++CP ++ C
Sbjct: 312 VNMSPRSPYLFIDVNVGDSKSGHRATDCEEEPNLDNVTCRKCEETGHFAKDCPKGGARGC 371
Query: 102 YACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C Q GH A +C P +D ++ C C GH S DC
Sbjct: 372 RNCGQEGHFAADC-------DQPPNLD-NVVCRNCEKNGHFSRDC 408
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 13/106 (12%)
Query: 16 GHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT-CYNCSGQGHVAKDCTV 74
GH C ++ + D + C KC GHFA++C C NC +GH A DC
Sbjct: 333 GHRATDCEEEPNLD------NVTCRKCEETGHFAKDCPKGGARGCRNCGQEGHFAADCDQ 386
Query: 75 K---SSIICYNCNSSGHFARNCPN--DSSK-RCYACHQAGHMAKEC 114
+++C NC +GHF+R+CP D SK +C C + GH C
Sbjct: 387 PPNLDNVVCRNCEKNGHFSRDCPEPKDWSKVKCSNCQEFGHTKVRC 432
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 64/166 (38%), Gaps = 42/166 (25%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKC--------------------NNYGHF 48
CYNC GH CP+ R D+ C C + GH
Sbjct: 283 CYNCSGEGHRVRDCPE-----PRKDR--FACRNCGYVNMSPRSPYLFIDVNVGDSKSGHR 335
Query: 49 ARECATE----SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC---PNDSSKRC 101
A +C E +VTC C GH AKDC + C NC GHFA +C PN + C
Sbjct: 336 ATDCEEEPNLDNVTCRKCEETGHFAKDCPKGGARGCRNCGQEGHFAADCDQPPNLDNVVC 395
Query: 102 YACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
C + GH +++C PEP + C C GH CK
Sbjct: 396 RNCEKNGHFSRDC--------PEPKDWSKVKCSNCQEFGHTKVRCK 433
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 11/72 (15%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
C++C GH CPN C C + GHMAKECP + A ++C CG +
Sbjct: 65 CFSCGEEGHRKFECPNAPQMTCNYCKEPGHMAKECPTKPA-----------MSCNNCGEE 113
Query: 140 GHLSYDCKLVQK 151
GH+S DC +K
Sbjct: 114 GHMSKDCTNPRK 125
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE-SVTCYNCSGQG 66
+C++C + GH ++ CP + C C GH A+EC T+ +++C NC +G
Sbjct: 64 KCFSCGEEGHRKFECPNAPQ---------MTCNYCKEPGHMAKECPTKPAMSCNNCGEEG 114
Query: 67 HVAKDCTVKSSI 78
H++KDCT I
Sbjct: 115 HMSKDCTNPRKI 126
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 16/98 (16%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TESVT 58
+ + C C + GH+ CP+ ARG C C GHFA +C ++V
Sbjct: 344 NLDNVTCRKCEETGHFAKDCPK---GGARG------CRNCGQEGHFAADCDQPPNLDNVV 394
Query: 59 CYNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNC 93
C NC GH ++DC S + C NC GH C
Sbjct: 395 CRNCEKNGHFSRDCPEPKDWSKVKCSNCQEFGHTKVRC 432
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 39 CYKCNNYGHFARECAT-ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
C+ C GH EC +TC C GH+AK+C K ++ C NC GH +++C N
Sbjct: 65 CFSCGEEGHRKFECPNAPQMTCNYCKEPGHMAKECPTKPAMSCNNCGEEGHMSKDCTN 122
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
C++C +GH +C + C C GH A+ CP + C C + GHM+K+C
Sbjct: 65 CFSCGEEGHRKFECPNAPQMTCNYCKEPGHMAKECPTKPAMSCNNCGEEGHMSKDC 120
>gi|46137541|ref|XP_390462.1| hypothetical protein FG10286.1 [Gibberella zeae PH-1]
Length = 185
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 31/132 (23%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNN-----YGHFARECATESV------ 57
CY C GH CP G CYK ++ GH AR C S
Sbjct: 60 CYKCGQPGHISRDCPMSG-----GSGQATECYKASSNCRLLIGHIARNCNKSSYGNNYGG 114
Query: 58 ----------TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS---KRCYAC 104
TCY+C G GH++++C + + CYNC SGH++R+CP +S+ K CY C
Sbjct: 115 GFQQQGGAGKTCYSCGGFGHMSRECV--NGMKCYNCGESGHYSRDCPKESAGGEKICYKC 172
Query: 105 HQAGHMAKECPG 116
Q GH+ +CPG
Sbjct: 173 QQPGHVQSQCPG 184
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 16/125 (12%)
Query: 38 VCYKCNNYGHFARECATES-VTCYNCSGQGHVAKDCT--VKSSIICYNCNSSGHFARNCP 94
CY C + H AR+C T+ CYNC G+GH+++DCT +K + CY C GH +R+CP
Sbjct: 15 ACYSCGSTAHQARDCPTKGPAKCYNCGGEGHMSRDCTEPMKDNKSCYKCGQPGHISRDCP 74
Query: 95 -NDSSKRCYACHQA--------GHMAKECPGQTAGKS----PEPVVDMSLTCYVCGHQGH 141
+ S + C++A GH+A+ C + G + + TCY CG GH
Sbjct: 75 MSGGSGQATECYKASSNCRLLIGHIARNCNKSSYGNNYGGGFQQQGGAGKTCYSCGGFGH 134
Query: 142 LSYDC 146
+S +C
Sbjct: 135 MSREC 139
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 67/165 (40%), Gaps = 49/165 (29%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT---ESVTCYNCSGQ 65
CY+C H CP K A CY C GH +R+C ++ +CY C
Sbjct: 16 CYSCGSTAHQARDCPTKGPAK---------CYNCGGEGHMSRDCTEPMKDNKSCYKCGQP 66
Query: 66 GHVAKDCTVKS----SIICYNCNSS-----GHFARNCPNDS---------------SKRC 101
GH+++DC + + CY +S+ GH ARNC S K C
Sbjct: 67 GHISRDCPMSGGSGQATECYKASSNCRLLIGHIARNCNKSSYGNNYGGGFQQQGGAGKTC 126
Query: 102 YACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
Y+C GHM++EC + CY CG GH S DC
Sbjct: 127 YSCGGFGHMSRECVN-------------GMKCYNCGESGHYSRDC 158
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 69/169 (40%), Gaps = 42/169 (24%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-----ATESV 57
+ +CYNC GH C + K CYKC GH +R+C + ++
Sbjct: 31 TKGPAKCYNCGGEGHMSRDCTEPM-------KDNKSCYKCGQPGHISRDCPMSGGSGQAT 83
Query: 58 TCYNCSGQ-----GHVAKDCTVKS---------------SIICYNCNSSGHFARNCPNDS 97
CY S GH+A++C S CY+C GH +R C N
Sbjct: 84 ECYKASSNCRLLIGHIARNCNKSSYGNNYGGGFQQQGGAGKTCYSCGGFGHMSRECVN-- 141
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+CY C ++GH +++CP ++AG CY C GH+ C
Sbjct: 142 GMKCYNCGESGHYSRDCPKESAGG--------EKICYKCQQPGHVQSQC 182
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
CY+C S+ H AR+CP +CY C GHM+++C EP+ D + +CY CG
Sbjct: 16 CYSCGSTAHQARDCPTKGPAKCYNCGGEGHMSRDCT--------EPMKD-NKSCYKCGQP 66
Query: 140 GHLSYDCKL 148
GH+S DC +
Sbjct: 67 GHISRDCPM 75
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSS---IICYNCNSSGHFARNCP 94
CY C +GH +REC + CYNC GH ++DC +S+ ICY C GH CP
Sbjct: 125 TCYSCGGFGHMSRECVN-GMKCYNCGESGHYSRDCPKESAGGEKICYKCQQPGHVQSQCP 183
Query: 95 ND 96
+
Sbjct: 184 GN 185
>gi|42558260|ref|NP_976048.1| zinc finger CCHC domain-containing protein 13 [Homo sapiens]
gi|71152962|sp|Q8WW36.1|ZCH13_HUMAN RecName: Full=Zinc finger CCHC domain-containing protein 13
gi|18088951|gb|AAH21176.1| Zinc finger, CCHC domain containing 13 [Homo sapiens]
gi|119619053|gb|EAW98647.1| zinc finger, CCHC domain containing 13, isoform CRA_b [Homo
sapiens]
gi|167774083|gb|ABZ92476.1| zinc finger, CCHC domain containing 13 [synthetic construct]
gi|190689697|gb|ACE86623.1| zinc finger, CCHC domain containing 13 protein [synthetic
construct]
gi|190691059|gb|ACE87304.1| zinc finger, CCHC domain containing 13 protein [synthetic
construct]
Length = 166
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 17/112 (15%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCP 94
CY C G A+ C CYNC GH+AKDC + CY C GH AR+C
Sbjct: 46 TCYCCGESGRNAKNCVLLGNICYNCGRSGHIAKDCKDPKRERRQHCYTCGRLGHLARDCD 105
Query: 95 NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++CY+C + GH+ K+C + CY CG GH++ +C
Sbjct: 106 RQKEQKCYSCGKLGHIQKDCA--------------QVKCYRCGEIGHVAINC 143
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 21/139 (15%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT--- 58
S+T + CY C + G +C +G +CY C GH A++C
Sbjct: 40 STTLSYTCYCCGESGRNAKNCVL----------LGNICYNCGRSGHIAKDCKDPKRERRQ 89
Query: 59 -CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC--- 114
CY C GH+A+DC + CY+C GH ++C + +CY C + GH+A C
Sbjct: 90 HCYTCGRLGHLARDCDRQKEQKCYSCGKLGHIQKDC---AQVKCYRCGEIGHVAINCSKA 146
Query: 115 -PGQTAGKSPEPVVDMSLT 132
PGQ P ++
Sbjct: 147 RPGQLLPLRQIPTSSQGMS 165
>gi|361128417|gb|EHL00352.1| putative DNA-binding protein HEXBP [Glarea lozoyensis 74030]
Length = 1536
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 62/177 (35%), Gaps = 82/177 (46%)
Query: 20 YSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQGHVAKDCTVKSS 77
Y+CP K CY C REC + TCY C GH+++DCT +S
Sbjct: 13 YNCPAK-------------CYNCG-----GRECPEGPKDKTCYKCGQPGHISRDCTNPAS 54
Query: 78 II--------------------CYNCNSSGHFARNCPN---------------------- 95
CY C+ GH ARNCP
Sbjct: 55 EGAGRGGGGGGGFGGQGGGNQECYKCSKIGHIARNCPEAGGYGGGGGGYGGQQGGGYGGG 114
Query: 96 -------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYD 145
+ CY+C GHM+++C T G+ CY CG GHLS++
Sbjct: 115 QGGFGGRQGGQTCYSCGGYGHMSRDC---TQGQK----------CYNCGEVGHLSHE 158
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 41/123 (33%), Gaps = 43/123 (34%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV-----------CYKCNNYGHFAREC----- 52
CY C GH C +S A G CYKC+ GH AR C
Sbjct: 36 CYKCGQPGHISRDCTNPASEGAGRGGGGGGGFGGQGGGNQECYKCSKIGHIARNCPEAGG 95
Query: 53 -------------------------ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSG 87
TCY+C G GH+++DCT CYNC G
Sbjct: 96 YGGGGGGYGGQQGGGYGGGQGGFGGRQGGQTCYSCGGYGHMSRDCTQGQK--CYNCGEVG 153
Query: 88 HFA 90
H +
Sbjct: 154 HLS 156
>gi|242807741|ref|XP_002485018.1| zinc knuckle domain protein (Byr3), putative [Talaromyces
stipitatus ATCC 10500]
gi|218715643|gb|EED15065.1| zinc knuckle domain protein (Byr3), putative [Talaromyces
stipitatus ATCC 10500]
Length = 181
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 58/130 (44%), Gaps = 25/130 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGD--------KVGIVCYKCNNYGHFARECA------- 53
CY C GH C Q A+ G+ G CYKC GH AR C+
Sbjct: 53 CYRCGQTGHISRDCQQSGPANNGGNYRGGFSGGSGGQECYKCGQVGHIARNCSQGGGYGG 112
Query: 54 ------TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS--KRCYACH 105
TCY+C G GH+A+DCT CYNC GH +R+C + + + CY C
Sbjct: 113 GHGGFGGRQQTCYSCGGYGHMARDCT--QGQKCYNCGEVGHVSRDCTTEGNGERVCYKCK 170
Query: 106 QAGHMAKECP 115
Q GH+ CP
Sbjct: 171 QPGHVQSACP 180
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 60/133 (45%), Gaps = 20/133 (15%)
Query: 39 CYKCNNYGHFARECATESV-TCYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARNCPND 96
C+ C H AR+C + TCYNC GQGHV+++CT CY C +GH +R+C
Sbjct: 10 CFNCGEPSHQARDCPKKGTPTCYNCGGQGHVSRECTQAPKEKSCYRCGQTGHISRDCQQS 69
Query: 97 S-----------------SKRCYACHQAGHMAKECP-GQTAGKSPEPVVDMSLTCYVCGH 138
+ CY C Q GH+A+ C G G TCY CG
Sbjct: 70 GPANNGGNYRGGFSGGSGGQECYKCGQVGHIARNCSQGGGYGGGHGGFGGRQQTCYSCGG 129
Query: 139 QGHLSYDCKLVQK 151
GH++ DC QK
Sbjct: 130 YGHMARDCTQGQK 142
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 70/176 (39%), Gaps = 53/176 (30%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTC 59
+ T + C+NC + H CP+K + CY C GH +REC A + +C
Sbjct: 3 NQTGSRGCFNCGEPSHQARDCPKKGTP---------TCYNCGGQGHVSRECTQAPKEKSC 53
Query: 60 YNCSGQGHVAKDCTVKSSI-----------------ICYNCNSSGHFARNCPNDS----- 97
Y C GH+++DC CY C GH ARNC
Sbjct: 54 YRCGQTGHISRDCQQSGPANNGGNYRGGFSGGSGGQECYKCGQVGHIARNCSQGGGYGGG 113
Query: 98 -------SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY+C GHMA++C T G+ CY CG GH+S DC
Sbjct: 114 HGGFGGRQQTCYSCGGYGHMARDC---TQGQK----------CYNCGEVGHVSRDC 156
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGI---VCYKCNNYGHFARECATESVTCYNCSG 64
+CY C GH +C Q G CY C YGH AR+C T+ CYNC
Sbjct: 90 ECYKCGQVGHIARNCSQGGGYGGGHGGFGGRQQTCYSCGGYGHMARDC-TQGQKCYNCGE 148
Query: 65 QGHVAKDCTVKSS--IICYNCNSSGHFARNCPN 95
GHV++DCT + + +CY C GH CPN
Sbjct: 149 VGHVSRDCTTEGNGERVCYKCKQPGHVQSACPN 181
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 51 ECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN-DSSKRCYACHQAGH 109
E T S C+NC H A+DC K + CYNC GH +R C K CY C Q GH
Sbjct: 2 ENQTGSRGCFNCGEPSHQARDCPKKGTPTCYNCGGQGHVSRECTQAPKEKSCYRCGQTGH 61
Query: 110 MAKEC----PGQTAG--KSPEPVVDMSLTCYVCGHQGHLSYDC 146
++++C P G + CY CG GH++ +C
Sbjct: 62 ISRDCQQSGPANNGGNYRGGFSGGSGGQECYKCGQVGHIARNC 104
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 64/171 (37%), Gaps = 49/171 (28%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT------- 58
T CYNC GH C Q + CY+C GH +R+C
Sbjct: 28 TPTCYNCGGQGHVSRECTQAPKEKS--------CYRCGQTGHISRDCQQSGPANNGGNYR 79
Query: 59 -----------CYNCSGQGHVAKDCT------------VKSSIICYNCNSSGHFARNCPN 95
CY C GH+A++C+ CY+C GH AR+C
Sbjct: 80 GGFSGGSGGQECYKCGQVGHIARNCSQGGGYGGGHGGFGGRQQTCYSCGGYGHMARDC-- 137
Query: 96 DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++CY C + GH++++C + G+ CY C GH+ C
Sbjct: 138 TQGQKCYNCGEVGHVSRDCTTEGNGE---------RVCYKCKQPGHVQSAC 179
>gi|347441721|emb|CCD34642.1| similar to zinc knuckle domain-containing protein [Botryotinia
fuckeliana]
Length = 206
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 64/144 (44%), Gaps = 31/144 (21%)
Query: 39 CYKCNNYGHFARECATESVT-CYNCSGQGHVAKDCTV-KSSIICYNCNSSGHFARNCPND 96
C+ C GH AREC + CYNC GH+++DC +CY C +SGH +++C N
Sbjct: 16 CFTCGTEGHQARECPSRGPPKCYNCDNPGHLSRDCPEGPKEKVCYRCGTSGHISKDCSNP 75
Query: 97 SS--------------KRCYACHQAGHMAKECP---------------GQTAGKSPEPVV 127
+ ++CY C + GH+A+ CP G G
Sbjct: 76 PTEGAGRGGGYGGGGGQQCYKCSKIGHIARNCPEAGGYGGNQGYGGNQGGYGGGFGGGAR 135
Query: 128 DMSLTCYVCGHQGHLSYDCKLVQK 151
S TC+ CG GHLS DC QK
Sbjct: 136 QGSQTCFSCGGYGHLSRDCTQGQK 159
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 75/195 (38%), Gaps = 71/195 (36%)
Query: 1 MSSTSTIQ-------CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC- 52
M S +++Q C+ C GH CP + CY C+N GH +R+C
Sbjct: 1 MDSFTSLQGGAPNRGCFTCGTEGHQARECPSRGPPK---------CYNCDNPGHLSRDCP 51
Query: 53 -ATESVTCYNCSGQGHVAKDCTVKSSII--------------CYNCNSSGHFARNCPN-- 95
+ CY C GH++KDC+ + CY C+ GH ARNCP
Sbjct: 52 EGPKEKVCYRCGTSGHISKDCSNPPTEGAGRGGGYGGGGGQQCYKCSKIGHIARNCPEAG 111
Query: 96 ------------------------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSL 131
S+ C++C GH++++C T G+
Sbjct: 112 GYGGNQGYGGNQGGYGGGFGGGARQGSQTCFSCGGYGHLSRDC---TQGQK--------- 159
Query: 132 TCYVCGHQGHLSYDC 146
CY CG GHLS DC
Sbjct: 160 -CYNCGEVGHLSRDC 173
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGH 67
QCY C GH +CP+ G +G AR+ S TC++C G GH
Sbjct: 93 QCYKCSKIGHIARNCPEAGGYGGNQGYGGNQGGYGGGFGGGARQ---GSQTCFSCGGYGH 149
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPNDSS--KRCYACHQAGHMAKECP 115
+++DCT CYNC GH +R+C ++S +RCY C Q GH +CP
Sbjct: 150 LSRDCT--QGQKCYNCGEVGHLSRDCSQETSEARRCYECKQEGHEKLDCP 197
>gi|295658168|ref|XP_002789646.1| DNA-binding protein HEXBP [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283131|gb|EEH38697.1| DNA-binding protein HEXBP [Paracoccidioides sp. 'lutzii' Pb01]
Length = 190
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 63/145 (43%), Gaps = 29/145 (20%)
Query: 36 GIVCYKCNNYGHFARECATESV-TCYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARNC 93
G C+ C + H AR+C + TCYNC GQGHV+++CT CY C GH +R+C
Sbjct: 7 GRGCFNCGDASHQARDCPKKGTPTCYNCGGQGHVSRECTAAPKEKTCYRCGQGGHISRDC 66
Query: 94 PNDSS------------------KRCYACHQAGHMAKECP---------GQTAGKSPEPV 126
+ S + CY C Q GH+A+ C G
Sbjct: 67 TSAGSGDSYTPSGGYSGGGGASSQECYKCGQVGHIARNCSQGYSSGGYGSGAGGYGGGYG 126
Query: 127 VDMSLTCYVCGHQGHLSYDCKLVQK 151
+ TCY CG GH++ DC QK
Sbjct: 127 GNRQQTCYSCGGFGHMARDCTQGQK 151
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 56/139 (40%), Gaps = 34/139 (24%)
Query: 9 CYNCFDFGHYQYSCPQKSSADA---------RGDKVGIVCYKCNNYGHFARECA------ 53
CY C GH C S D+ G CYKC GH AR C+
Sbjct: 53 CYRCGQGGHISRDCTSAGSGDSYTPSGGYSGGGGASSQECYKCGQVGHIARNCSQGYSSG 112
Query: 54 ---------------TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND-- 96
TCY+C G GH+A+DCT CYNC GH +R+CP +
Sbjct: 113 GYGSGAGGYGGGYGGNRQQTCYSCGGFGHMARDCT--QGQKCYNCGEVGHVSRDCPTEVK 170
Query: 97 SSKRCYACHQAGHMAKECP 115
+ CY C Q GH+ CP
Sbjct: 171 GERVCYKCKQPGHVQAACP 189
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGI-----------VCYKCNNYGHFARECATES 56
+CY C GH +C Q S+ G G CY C +GH AR+C T+
Sbjct: 91 ECYKCGQVGHIARNCSQGYSSGGYGSGAGGYGGGYGGNRQQTCYSCGGFGHMARDC-TQG 149
Query: 57 VTCYNCSGQGHVAKDC--TVKSSIICYNCNSSGHFARNCPN 95
CYNC GHV++DC VK +CY C GH CPN
Sbjct: 150 QKCYNCGEVGHVSRDCPTEVKGERVCYKCKQPGHVQAACPN 190
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 71/190 (37%), Gaps = 63/190 (33%)
Query: 9 CYNCFDFGHYQYSCPQKS-------------SADARGDKVGIVCYKCNNYGHFARECAT- 54
C+NC D H CP+K S + CY+C GH +R+C +
Sbjct: 10 CFNCGDASHQARDCPKKGTPTCYNCGGQGHVSRECTAAPKEKTCYRCGQGGHISRDCTSA 69
Query: 55 ---ESVT---------------CYNCSGQGHVAKDCT--------------------VKS 76
+S T CY C GH+A++C+
Sbjct: 70 GSGDSYTPSGGYSGGGGASSQECYKCGQVGHIARNCSQGYSSGGYGSGAGGYGGGYGGNR 129
Query: 77 SIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVC 136
CY+C GH AR+C ++CY C + GH++++CP + G+ CY C
Sbjct: 130 QQTCYSCGGFGHMARDC--TQGQKCYNCGEVGHVSRDCPTEVKGE---------RVCYKC 178
Query: 137 GHQGHLSYDC 146
GH+ C
Sbjct: 179 KQPGHVQAAC 188
>gi|225684876|gb|EEH23160.1| cellular nucleic acid-binding protein [Paracoccidioides
brasiliensis Pb03]
gi|226287748|gb|EEH43261.1| DNA-binding protein HEXBP [Paracoccidioides brasiliensis Pb18]
Length = 190
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 64/145 (44%), Gaps = 29/145 (20%)
Query: 36 GIVCYKCNNYGHFARECATESV-TCYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARNC 93
G C+ C + H AR+C + TCYNC GQGHV+++CT CY C GH +R+C
Sbjct: 7 GRGCFNCGDASHQARDCPKKGTPTCYNCGGQGHVSRECTAAPKEKTCYRCGQGGHISRDC 66
Query: 94 PNDSS------------------KRCYACHQAGHMAKECP---------GQTAGKSPEPV 126
+ S + CY C Q GH+A+ C G G
Sbjct: 67 TSAGSGDSYTPSGGYSGGGGASSQECYKCGQVGHIARNCSQGYGSGGYGGGAGGYGGGYG 126
Query: 127 VDMSLTCYVCGHQGHLSYDCKLVQK 151
+ TCY CG GH++ DC QK
Sbjct: 127 GNRQQTCYSCGGFGHMARDCTQGQK 151
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 56/139 (40%), Gaps = 34/139 (24%)
Query: 9 CYNCFDFGHYQYSCPQKSSADA---------RGDKVGIVCYKCNNYGHFARECA------ 53
CY C GH C S D+ G CYKC GH AR C+
Sbjct: 53 CYRCGQGGHISRDCTSAGSGDSYTPSGGYSGGGGASSQECYKCGQVGHIARNCSQGYGSG 112
Query: 54 ---------------TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND-- 96
TCY+C G GH+A+DCT CYNC GH +R+CP +
Sbjct: 113 GYGGGAGGYGGGYGGNRQQTCYSCGGFGHMARDCT--QGQKCYNCGEVGHVSRDCPTEVK 170
Query: 97 SSKRCYACHQAGHMAKECP 115
+ CY C Q GH+ CP
Sbjct: 171 GERVCYKCKQPGHVQAACP 189
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 46/101 (45%), Gaps = 14/101 (13%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGI-----------VCYKCNNYGHFARECATES 56
+CY C GH +C Q + G G CY C +GH AR+C T+
Sbjct: 91 ECYKCGQVGHIARNCSQGYGSGGYGGGAGGYGGGYGGNRQQTCYSCGGFGHMARDC-TQG 149
Query: 57 VTCYNCSGQGHVAKDC--TVKSSIICYNCNSSGHFARNCPN 95
CYNC GHV++DC VK +CY C GH CPN
Sbjct: 150 QKCYNCGEVGHVSRDCPTEVKGERVCYKCKQPGHVQAACPN 190
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 71/190 (37%), Gaps = 63/190 (33%)
Query: 9 CYNCFDFGHYQYSCPQKS-------------SADARGDKVGIVCYKCNNYGHFARECAT- 54
C+NC D H CP+K S + CY+C GH +R+C +
Sbjct: 10 CFNCGDASHQARDCPKKGTPTCYNCGGQGHVSRECTAAPKEKTCYRCGQGGHISRDCTSA 69
Query: 55 ---ESVT---------------CYNCSGQGHVAKDCT--------------------VKS 76
+S T CY C GH+A++C+
Sbjct: 70 GSGDSYTPSGGYSGGGGASSQECYKCGQVGHIARNCSQGYGSGGYGGGAGGYGGGYGGNR 129
Query: 77 SIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVC 136
CY+C GH AR+C ++CY C + GH++++CP + G+ CY C
Sbjct: 130 QQTCYSCGGFGHMARDC--TQGQKCYNCGEVGHVSRDCPTEVKGE---------RVCYKC 178
Query: 137 GHQGHLSYDC 146
GH+ C
Sbjct: 179 KQPGHVQAAC 188
>gi|358369000|dbj|GAA85616.1| zinc knuckle domain protein [Aspergillus kawachii IFO 4308]
Length = 144
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGH 67
+CY C GH +CPQ CY C +GH AR+C T CYNC GH
Sbjct: 56 ECYKCGRVGHIARNCPQSGGYGGGFGGRQQTCYSCGGFGHMARDC-TNGQKCYNCGEVGH 114
Query: 68 VAKDCTV--KSSIICYNCNSSGHFARNCPN 95
V++DC K +CYNC GH CPN
Sbjct: 115 VSRDCPTEAKGERVCYNCKQPGHVQAACPN 144
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 56/121 (46%), Gaps = 16/121 (13%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV--CYKCNNYGHFARECA----------TES 56
CY C GH C + G G CYKC GH AR C
Sbjct: 25 CYRCGGVGHISRECQASPAEGFGGAAAGGGQECYKCGRVGHIARNCPQSGGYGGGFGGRQ 84
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS--SKRCYACHQAGHMAKEC 114
TCY+C G GH+A+DCT + CYNC GH +R+CP ++ + CY C Q GH+ C
Sbjct: 85 QTCYSCGGFGHMARDCT--NGQKCYNCGEVGHVSRDCPTEAKGERVCYNCKQPGHVQAAC 142
Query: 115 P 115
P
Sbjct: 143 P 143
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 32/129 (24%)
Query: 39 CYKCNNYGHFARECATESV------------TCYNCSGQGHVAKDCT---------VKSS 77
CY+C GH +REC CY C GH+A++C
Sbjct: 25 CYRCGGVGHISRECQASPAEGFGGAAAGGGQECYKCGRVGHIARNCPQSGGYGGGFGGRQ 84
Query: 78 IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCG 137
CY+C GH AR+C N ++CY C + GH++++CP + G+ CY C
Sbjct: 85 QTCYSCGGFGHMARDCTN--GQKCYNCGEVGHVSRDCPTEAKGER---------VCYNCK 133
Query: 138 HQGHLSYDC 146
GH+ C
Sbjct: 134 QPGHVQAAC 142
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 54/124 (43%), Gaps = 35/124 (28%)
Query: 50 REC--ATESVTCYNCSGQGHVAKDCTVKSSII-----------CYNCNSSGHFARNCPND 96
REC A + +CY C G GH++++C + CY C GH ARNCP
Sbjct: 14 RECTVAPKEKSCYRCGGVGHISRECQASPAEGFGGAAAGGGQECYKCGRVGHIARNCPQS 73
Query: 97 ---------SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ CY+C GHMA++C T G+ CY CG GH+S DC
Sbjct: 74 GGYGGGFGGRQQTCYSCGGFGHMARDC---TNGQK----------CYNCGEVGHVSRDCP 120
Query: 148 LVQK 151
K
Sbjct: 121 TEAK 124
>gi|13447196|gb|AAK26659.1|AF343317_1 putative DNA binding protein, partial [Schizophyllum commune]
Length = 146
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 24/103 (23%)
Query: 39 CYKCNNYGHFARECATESV----------------------TCYNCSGQGHVAKDCTVKS 76
CY+C GH AR C + +CY C G GH++KDC
Sbjct: 44 CYRCGKAGHMARACPEPAPGGNASYGGGGSYGYGGGFQSQKSCYTCGGVGHLSKDCVQGQ 103
Query: 77 SIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
CYNC+ +GH +R+CPN K CY+C H++++CPG A
Sbjct: 104 R--CYNCSETGHISRDCPNPQKKACYSCGSESHISRDCPGAVA 144
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 52/142 (36%), Gaps = 52/142 (36%)
Query: 54 TESVTCYNCSGQGHVAKDCTVKSSII-----------------CYNCNSSGHFARNCPN- 95
+ TCY C G+GH+++DC+ + CY C +GH AR CP
Sbjct: 1 ARAKTCYKCGGEGHISRDCSSADAGGAGGYSGGGFGGGARGGECYRCGKAGHMARACPEP 60
Query: 96 --------------------DSSKRCYACHQAGHMAKEC-----------PGQTAGKSPE 124
S K CY C GH++K+C G + P
Sbjct: 61 APGGNASYGGGGSYGYGGGFQSQKSCYTCGGVGHLSKDCVQGQRCYNCSETGHISRDCPN 120
Query: 125 PVVDMSLTCYVCGHQGHLSYDC 146
P CY CG + H+S DC
Sbjct: 121 P---QKKACYSCGSESHISRDC 139
>gi|408384431|gb|AFU61902.1| putative GIS2 DNA-binding protein, partial [Polyporales sp.
KUC9061]
Length = 96
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 16 GHYQYSCPQ------KSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVA 69
GH SCP+ + S A G CY C GH +R+C + CYNCSG GH++
Sbjct: 1 GHIARSCPEAGNSGYQGSWSAFGGGQQRTCYTCGGVGHLSRDC-VQGSKCYNCSGFGHIS 59
Query: 70 KDCTVKSSIICYNCNSSGHFARNCPNDS 97
KDC CYNC S GH +R+CP +
Sbjct: 60 KDCPQPQRRACYNCGSEGHISRDCPGTA 87
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 43/101 (42%), Gaps = 18/101 (17%)
Query: 46 GHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACH 105
GH AR C + Y S CY C GH +R+C S +CY C
Sbjct: 1 GHIARSCPEAGNSGYQGSWSAFGGGQ-----QRTCYTCGGVGHLSRDCVQGS--KCYNCS 53
Query: 106 QAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GH++K+CP +P CY CG +GH+S DC
Sbjct: 54 GFGHISKDCP--------QP---QRRACYNCGSEGHISRDC 83
>gi|123325507|gb|ABM74410.1| vasa protein [Botrylloides violaceus]
Length = 630
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 13/107 (12%)
Query: 53 ATESVTCYNCSGQGHVAKDC-----TVKSSIICYNCNSSGHFARNCPNDSSKR-----CY 102
+ S C+ C +GH+++DC S C+ C GH +R+CP+ C+
Sbjct: 37 GSRSKGCFKCGEEGHMSRDCPSGGGGGSRSKGCFKCGEEGHMSRDCPSGGGGGSRSKGCF 96
Query: 103 ACHQAGHMAKECP-GQTAGKSPEPVVD--MSLTCYVCGHQGHLSYDC 146
C + GH++++CP GQ + S D S CY CG +GH S +C
Sbjct: 97 KCGEEGHISRDCPNGQKSDFSRNGAGDCARSTACYKCGEEGHFSREC 143
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 25/102 (24%)
Query: 39 CYKCNNYGHFAREC------ATESVTCYNCSGQGHVAKDC-----TVKSSIICYNCNSSG 87
C+KC GH +R+C + S C+ C +GH+++DC S C+ C G
Sbjct: 43 CFKCGEEGHMSRDCPSGGGGGSRSKGCFKCGEEGHMSRDCPSGGGGGSRSKGCFKCGEEG 102
Query: 88 HFARNCPNDS--------------SKRCYACHQAGHMAKECP 115
H +R+CPN S CY C + GH ++ECP
Sbjct: 103 HISRDCPNGQKSDFSRNGAGDCARSTACYKCGEEGHFSRECP 144
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 24/106 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC------ATESVTCYNC 62
C+ C + GH CP +R C+KC GH +R+C + S C+ C
Sbjct: 43 CFKCGEEGHMSRDCPSGGGGGSRSKG----CFKCGEEGHMSRDCPSGGGGGSRSKGCFKC 98
Query: 63 SGQGHVAKDC--------------TVKSSIICYNCNSSGHFARNCP 94
+GH+++DC S CY C GHF+R CP
Sbjct: 99 GEEGHISRDCPNGQKSDFSRNGAGDCARSTACYKCGEEGHFSRECP 144
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 19/104 (18%)
Query: 54 TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR-----CYACHQAG 108
TES+ N G G +K C + C GH +R+CP+ C+ C + G
Sbjct: 25 TESLRNGNGDGGGSRSKGC--------FKCGEEGHMSRDCPSGGGGGSRSKGCFKCGEEG 76
Query: 109 HMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
HM+++CP G S S C+ CG +GH+S DC QKS
Sbjct: 77 HMSRDCPSGGGGGS------RSKGCFKCGEEGHISRDCPNGQKS 114
>gi|443895584|dbj|GAC72930.1| E3 ubiquitin ligase interacting with arginine methyltransferase
[Pseudozyma antarctica T-34]
Length = 130
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 34/135 (25%)
Query: 38 VCYKCNNYGHFARECATE-SVTCYNCSGQGHVAKDCTVKSSI-ICYNCNSSGHFARNCPN 95
C+ C GH A C T + +CYNC QGH++ C +++ CY CN +GH +R+CP+
Sbjct: 6 TCFNCGQPGHNAAACPTAGNPSCYNCGQQGHISSQCGMEAQPKTCYKCNETGHISRDCPS 65
Query: 96 DSS---------------------KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
+ + +RCY C++ GH++++CP + +CY
Sbjct: 66 NPAPSSGGAGGECYNGGSGAGYGGQRCYNCNETGHLSRDCP-----------KPQTKSCY 114
Query: 135 VCGHQGHLSYDCKLV 149
CG + HLS C
Sbjct: 115 RCGAEDHLSAACPTA 129
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 56/130 (43%), Gaps = 32/130 (24%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES--VTCYNCSGQG 66
C+NC GH +CP + CY C GH + +C E+ TCY C+ G
Sbjct: 7 CFNCGQPGHNAAACPTAGNPS---------CYNCGQQGHISSQCGMEAQPKTCYKCNETG 57
Query: 67 HVAKDCTVKSSI---------------------ICYNCNSSGHFARNCPNDSSKRCYACH 105
H+++DC + CYNCN +GH +R+CP +K CY C
Sbjct: 58 HISRDCPSNPAPSSGGAGGECYNGGSGAGYGGQRCYNCNETGHLSRDCPKPQTKSCYRCG 117
Query: 106 QAGHMAKECP 115
H++ CP
Sbjct: 118 AEDHLSAACP 127
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 46/104 (44%), Gaps = 11/104 (10%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS-SKRCYACHQAGHMAKECPG 116
TC+NC GH A C + CYNC GH + C ++ K CY C++ GH++++CP
Sbjct: 6 TCFNCGQPGHNAAACPTAGNPSCYNCGQQGHISSQCGMEAQPKTCYKCNETGHISRDCPS 65
Query: 117 QTAGKS----------PEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
A S CY C GHLS DC Q
Sbjct: 66 NPAPSSGGAGGECYNGGSGAGYGGQRCYNCNETGHLSRDCPKPQ 109
>gi|336273387|ref|XP_003351448.1| hypothetical protein SMAC_07647 [Sordaria macrospora k-hell]
gi|380089245|emb|CCC12804.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 227
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 27/118 (22%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSAD--------------------ARGDKVGIVCYKCNN 44
ST +CYNC GHY +CP + G CYKC
Sbjct: 76 STSRCYNCGQPGHYMRACPNPPTGGMPQRGVPVGRGGFGGFGRGGFVGGARPATCYKCGG 135
Query: 45 YGHFARECATESVTCYNCSGQGHVAKDCTVK-------SSIICYNCNSSGHFARNCPN 95
HFAR+C +++ CY C GH+++DCT + CY C+ +GH +R+CPN
Sbjct: 136 PNHFARDCQAQAMKCYACGKLGHISRDCTAPNGGPLNTAGKTCYQCSETGHISRDCPN 193
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 60/152 (39%), Gaps = 41/152 (26%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----- 57
ST QCY+C GH Q CP + G CY C GH+ R C
Sbjct: 47 STEAKQCYHCQGLGHVQADCP---TLRISGAGSTSRCYNCGQPGHYMRACPNPPTGGMPQ 103
Query: 58 -------------------------TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARN 92
TCY C G H A+DC + ++ CY C GH +R+
Sbjct: 104 RGVPVGRGGFGGFGRGGFVGGARPATCYKCGGPNHFARDCQAQ-AMKCYACGKLGHISRD 162
Query: 93 CP-------NDSSKRCYACHQAGHMAKECPGQ 117
C N + K CY C + GH++++CP +
Sbjct: 163 CTAPNGGPLNTAGKTCYQCSETGHISRDCPNK 194
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 54/137 (39%), Gaps = 27/137 (19%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
CYKC GH A C++ CYNC H + +C + S CY+C GH +CP
Sbjct: 8 ACYKCGELGHHAEACSSPHRLCYNCKQPNHESSECPLPRSTEAKQCYHCQGLGHVQADCP 67
Query: 95 N------DSSKRCYACHQAGHMAKECPGQTAGKSPE------------------PVVDMS 130
S+ RCY C Q GH + CP G P+
Sbjct: 68 TLRISGAGSTSRCYNCGQPGHYMRACPNPPTGGMPQRGVPVGRGGFGGFGRGGFVGGARP 127
Query: 131 LTCYVCGHQGHLSYDCK 147
TCY CG H + DC+
Sbjct: 128 ATCYKCGGPNHFARDCQ 144
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 9/77 (11%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S CY C GH A C + + CY C Q H + ECP P + CY
Sbjct: 5 SRRACYKCGELGHHAEAC-SSPHRLCYNCKQPNHESSECP--------LPRSTEAKQCYH 55
Query: 136 CGHQGHLSYDCKLVQKS 152
C GH+ DC ++ S
Sbjct: 56 CQGLGHVQADCPTLRIS 72
>gi|357510711|ref|XP_003625644.1| Serine carboxypeptidase [Medicago truncatula]
gi|355500659|gb|AES81862.1| Serine carboxypeptidase [Medicago truncatula]
Length = 712
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 10/90 (11%)
Query: 20 YSCPQKSSADARGDK---------VGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAK 70
YS P GD V IVCYKC GH + C + C+ C +GH
Sbjct: 312 YSAPADKGKQKMGDDRRPKRRDAPVEIVCYKCGEKGHKSNVCGRDDRKCFRCGQKGHSLA 371
Query: 71 DCTVKSSIICYNCNSSGHFARNCPNDSSKR 100
+C + I+CYNCN GH + CP R
Sbjct: 372 ECK-RGDIVCYNCNGEGHISSQCPEPKKTR 400
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 10/66 (15%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
I CY C + GH KS+ R D+ C++C GH EC + CYNC+G+G
Sbjct: 338 IVCYKCGEKGH-------KSNVCGRDDRK---CFRCGQKGHSLAECKRGDIVCYNCNGEG 387
Query: 67 HVAKDC 72
H++ C
Sbjct: 388 HISSQC 393
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 13/75 (17%)
Query: 78 IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCG 137
I+CY C GH + C D ++C+ C Q GH EC + CY C
Sbjct: 338 IVCYKCGEKGHKSNVCGRDD-RKCFRCGQKGHSLAECKRG------------DIVCYNCN 384
Query: 138 HQGHLSYDCKLVQKS 152
+GH+S C +K+
Sbjct: 385 GEGHISSQCPEPKKT 399
>gi|212538011|ref|XP_002149161.1| zinc knuckle domain protein (Byr3), putative [Talaromyces marneffei
ATCC 18224]
gi|210068903|gb|EEA22994.1| zinc knuckle domain protein (Byr3), putative [Talaromyces marneffei
ATCC 18224]
Length = 183
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 62/135 (45%), Gaps = 22/135 (16%)
Query: 39 CYKCNNYGHFARECATESV-TCYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARNCPND 96
C+ C H AR+C + TCYNC GQGHV+++CT CY C +GH +R+C
Sbjct: 10 CFNCGEPSHQARDCPKKGTPTCYNCGGQGHVSRECTQAPKEKSCYRCGQTGHISRDCQQS 69
Query: 97 S-------------------SKRCYACHQAGHMAKECP-GQTAGKSPEPVVDMSLTCYVC 136
+ + CY C Q GH+A+ C G + G TCY C
Sbjct: 70 APAGGNNGGFSRGGFSGGAGGQECYKCGQVGHIARNCSQGGSYGGGHGGFGGRQQTCYSC 129
Query: 137 GHQGHLSYDCKLVQK 151
G GH++ DC QK
Sbjct: 130 GGYGHMARDCTQGQK 144
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 60/134 (44%), Gaps = 31/134 (23%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV------------CYKCNNYGHFARECA--- 53
CY C GH C Q SA A G+ G CYKC GH AR C+
Sbjct: 53 CYRCGQTGHISRDCQQ--SAPAGGNNGGFSRGGFSGGAGGQECYKCGQVGHIARNCSQGG 110
Query: 54 ----------TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS--KRC 101
TCY+C G GH+A+DCT CYNC GH +R+C +++ + C
Sbjct: 111 SYGGGHGGFGGRQQTCYSCGGYGHMARDCT--QGQKCYNCGEVGHVSRDCTTEANGERVC 168
Query: 102 YACHQAGHMAKECP 115
Y C Q GH+ CP
Sbjct: 169 YKCKQPGHVQSACP 182
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 68/171 (39%), Gaps = 55/171 (32%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQG 66
C+NC + H CP+K + CY C GH +REC A + +CY C G
Sbjct: 10 CFNCGEPSHQARDCPKKGTP---------TCYNCGGQGHVSRECTQAPKEKSCYRCGQTG 60
Query: 67 HVAKDCTVKSSI-------------------ICYNCNSSGHFARNCPNDS---------- 97
H+++DC + CY C GH ARNC
Sbjct: 61 HISRDCQQSAPAGGNNGGFSRGGFSGGAGGQECYKCGQVGHIARNCSQGGSYGGGHGGFG 120
Query: 98 --SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY+C GHMA++C T G+ CY CG GH+S DC
Sbjct: 121 GRQQTCYSCGGYGHMARDC---TQGQK----------CYNCGEVGHVSRDC 158
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGI---VCYKCNNYGHFARECATESVTCYNCSG 64
+CY C GH +C Q S G CY C YGH AR+C T+ CYNC
Sbjct: 92 ECYKCGQVGHIARNCSQGGSYGGGHGGFGGRQQTCYSCGGYGHMARDC-TQGQKCYNCGE 150
Query: 65 QGHVAKDCTVKSS--IICYNCNSSGHFARNCPN 95
GHV++DCT +++ +CY C GH CPN
Sbjct: 151 VGHVSRDCTTEANGERVCYKCKQPGHVQSACPN 183
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 65/173 (37%), Gaps = 51/173 (29%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT------- 58
T CYNC GH C Q + CY+C GH +R+C +
Sbjct: 28 TPTCYNCGGQGHVSRECTQAPKEKS--------CYRCGQTGHISRDCQQSAPAGGNNGGF 79
Query: 59 -------------CYNCSGQGHVAKDCT------------VKSSIICYNCNSSGHFARNC 93
CY C GH+A++C+ CY+C GH AR+C
Sbjct: 80 SRGGFSGGAGGQECYKCGQVGHIARNCSQGGSYGGGHGGFGGRQQTCYSCGGYGHMARDC 139
Query: 94 PNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++CY C + GH++++C + G+ CY C GH+ C
Sbjct: 140 --TQGQKCYNCGEVGHVSRDCTTEANGE---------RVCYKCKQPGHVQSAC 181
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN-DSSKRCYACHQAGHMAKEC 114
S C+NC H A+DC K + CYNC GH +R C K CY C Q GH++++C
Sbjct: 7 SRGCFNCGEPSHQARDCPKKGTPTCYNCGGQGHVSRECTQAPKEKSCYRCGQTGHISRDC 66
Query: 115 PGQTAG--------KSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY CG GH++ +C
Sbjct: 67 QQSAPAGGNNGGFSRGGFSGGAGGQECYKCGQVGHIARNC 106
>gi|317138215|ref|XP_001816756.2| zinc knuckle transcription factor (CnjB) [Aspergillus oryzae RIB40]
Length = 484
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 20/115 (17%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQG 66
C NC H CP SA+ G+ +GHFA++C A TC NC +
Sbjct: 328 CRNCGSSEHKAAECPNPRSAE------GV------EFGHFAKDCPQAPAPRTCRNCGSED 375
Query: 67 HVAKDCTVK---SSIICYNCNSSGHFARNCP--NDSSK-RCYACHQAGHMAKECP 115
H+A+DC S++ C NC+ GHF+R+CP D SK +C C + GH K CP
Sbjct: 376 HIARDCDKPRDISTVTCRNCDEVGHFSRDCPKKKDWSKVKCNNCGEMGHTVKRCP 430
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 61/143 (42%), Gaps = 18/143 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT---ESVTCYNCSG 64
+C NC + GH C ++ R V + C C+ GH AR+C + C NC
Sbjct: 277 KCSNCGEMGHTARGCKEEHVVHER---VEVKCVNCSAVGHRARDCTEPRRDRFACRNCGS 333
Query: 65 QGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAGKSP 123
H A +C S GHFA++CP + R C C H+A++C
Sbjct: 334 SEHKAAECPNPRSAEGV---EFGHFAKDCPQAPAPRTCRNCGSEDHIARDC--------D 382
Query: 124 EPVVDMSLTCYVCGHQGHLSYDC 146
+P ++TC C GH S DC
Sbjct: 383 KPRDISTVTCRNCDEVGHFSRDC 405
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC GH+ +CP+ + G+ C+ C GH EC V TC C+
Sbjct: 57 KCRNCGSDGHFARNCPEP--------RKGMACFNCGEEGHSKAECTKPRVFKGTCRVCNQ 108
Query: 65 QGHVAKDCTVKSSIICYNCNSSGHFARNC 93
+GH A C + +C NC GH +C
Sbjct: 109 EGHPASQCPERPPDVCKNCKMEGHRTIDC 137
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 38/88 (43%), Gaps = 19/88 (21%)
Query: 80 CYNCNSSGHFARNCPND-SSKRCYACHQAGHMAKEC---------------PGQTAGKSP 123
C NC S GHFARNCP C+ C + GH EC G A + P
Sbjct: 58 CRNCGSDGHFARNCPEPRKGMACFNCGEEGHSKAECTKPRVFKGTCRVCNQEGHPASQCP 117
Query: 124 EPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
E D+ C C +GH + DCK +K
Sbjct: 118 ERPPDV---CKNCKMEGHRTIDCKENRK 142
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT 58
ST+ C NC + GH+ CP+K D + C C GH + C + V
Sbjct: 386 DISTVTCRNCDEVGHFSRDCPKKK------DWSKVKCNNCGEMGHTVKRCPSAVVN 435
>gi|241022874|ref|XP_002406044.1| cellular nucleic acid binding protein, putative [Ixodes scapularis]
gi|215491870|gb|EEC01511.1| cellular nucleic acid binding protein, putative [Ixodes scapularis]
Length = 239
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 13/97 (13%)
Query: 59 CYNCSGQGHVAKDCTV------KSSIICYNCNSSGHFARNCPN---DSSKRCYACHQAGH 109
C+ C +GH+++DC + C+NC GH +R+CPN + SK C+ C + GH
Sbjct: 20 CFKCGEEGHMSRDCPSAGGDGDRPKRGCFNCGEDGHMSRDCPNPKQERSKGCFKCGEEGH 79
Query: 110 MAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
M+++CP TAG+ + D C+ C +GH++ DC
Sbjct: 80 MSRDCP--TAGEGGD--SDRPKGCFKCQQEGHMAKDC 112
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 17/94 (18%)
Query: 38 VCYKCNNYGHFARECAT-------ESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSG 87
C+KC GH +R+C + C+NC GH+++DC + S C+ C G
Sbjct: 19 ACFKCGEEGHMSRDCPSAGGDGDRPKRGCFNCGEDGHMSRDCPNPKQERSKGCFKCGEEG 78
Query: 88 HFARNCP-------NDSSKRCYACHQAGHMAKEC 114
H +R+CP +D K C+ C Q GHMAK+C
Sbjct: 79 HMSRDCPTAGEGGDSDRPKGCFKCQQEGHMAKDC 112
>gi|353236042|emb|CCA68045.1| related to GIS2-putative zinc finger protein, proposed to be
involved in the RAS/cAMP signaling pathway
[Piriformospora indica DSM 11827]
Length = 184
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 63/161 (39%), Gaps = 47/161 (29%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARG----------DKVGIVCYKCNNYGHFAR 50
T CY C GH CP+ ++ ++ D CY+C GH AR
Sbjct: 19 TGETKAKSCYKCGQEGHISRDCPEAANNNSSNANGGGYSGGRDNSSAECYRCGQVGHIAR 78
Query: 51 EC-----------------------------------ATESVTCYNCSGQGHVAKDCTVK 75
C TCY C G GH+++DC+
Sbjct: 79 NCPSSGGNSYGGGGRSGGGRGGYNRDRGGGGSYAAFGGGNQKTCYTCGGVGHISRDCSQG 138
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
+ CYNC+ +GH +++CP K CY C GH++++CPG
Sbjct: 139 AK--CYNCSGTGHVSKDCPQPQRKACYTCGSEGHISRDCPG 177
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 66/177 (37%), Gaps = 70/177 (39%)
Query: 37 IVC-YKCNNYGHFARECA--TESVTCYNCSGQGHVAKDCTV------------------- 74
+VC Y C GH +R+C T++ +CY C +GH+++DC
Sbjct: 2 VVCSYNCGQEGHISRDCTGETKAKSCYKCGQEGHISRDCPEAANNNSSNANGGGYSGGRD 61
Query: 75 KSSIICYNCNSSGHFARNCP----------------------------------NDSSKR 100
SS CY C GH ARNCP + K
Sbjct: 62 NSSAECYRCGQVGHIARNCPSSGGNSYGGGGRSGGGRGGYNRDRGGGGSYAAFGGGNQKT 121
Query: 101 CYACHQAGHMAKEC-----------PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C GH++++C G + P+P CY CG +GH+S DC
Sbjct: 122 CYTCGGVGHISRDCSQGAKCYNCSGTGHVSKDCPQP---QRKACYTCGSEGHISRDC 175
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 51/135 (37%), Gaps = 43/135 (31%)
Query: 60 YNCSGQGHVAKDCTVKSSII-CYNCNSSGHFARNCP-------------------NDSSK 99
YNC +GH+++DCT ++ CY C GH +R+CP ++SS
Sbjct: 6 YNCGQEGHISRDCTGETKAKSCYKCGQEGHISRDCPEAANNNSSNANGGGYSGGRDNSSA 65
Query: 100 RCYACHQAGHMAKECPGQTAGKSPEPVVDMSL-----------------------TCYVC 136
CY C Q GH+A+ CP TCY C
Sbjct: 66 ECYRCGQVGHIARNCPSSGGNSYGGGGRSGGGRGGYNRDRGGGGSYAAFGGGNQKTCYTC 125
Query: 137 GHQGHLSYDCKLVQK 151
G GH+S DC K
Sbjct: 126 GGVGHISRDCSQGAK 140
>gi|240273725|gb|EER37244.1| F-box protein [Ajellomyces capsulatus H143]
gi|325094843|gb|EGC48153.1| F-box domain-containing protein [Ajellomyces capsulatus H88]
Length = 857
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 59/143 (41%), Gaps = 38/143 (26%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV----------CYKCNNYGHFARECA----- 53
CY C GH C S D+ G+ G CYKC GH AR C+
Sbjct: 716 CYRCGQAGHISRDCTSAGSGDSYGNSGGYSGGGGAAGGQECYKCGQVGHIARNCSQSGGY 775
Query: 54 -------------------TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
TCY+C G GH+A+DCT CYNC GH +R+CP
Sbjct: 776 GSGGYGGATGGGYSGGYGGGRQQTCYSCGGYGHMARDCTQGQK--CYNCGEVGHVSRDCP 833
Query: 95 NDS--SKRCYACHQAGHMAKECP 115
++ + CY C Q GH+ CP
Sbjct: 834 TEAKGERVCYKCKQPGHVQATCP 856
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTV--KSSIICYNCNSSGHFARNCPN 95
CY C YGH AR+C T+ CYNC GHV++DC K +CY C GH CPN
Sbjct: 799 TCYSCGGYGHMARDC-TQGQKCYNCGEVGHVSRDCPTEAKGERVCYKCKQPGHVQATCPN 857
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 56/152 (36%), Gaps = 54/152 (35%)
Query: 38 VCYKCNNYGHFARECAT--------------------ESVTCYNCSGQGHVAKDCTVKSS 77
CY+C GH +R+C + CY C GH+A++C+
Sbjct: 715 TCYRCGQAGHISRDCTSAGSGDSYGNSGGYSGGGGAAGGQECYKCGQVGHIARNCSQSGG 774
Query: 78 I-----------------------ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
CY+C GH AR+C ++CY C + GH++++C
Sbjct: 775 YGSGGYGGATGGGYSGGYGGGRQQTCYSCGGYGHMARDC--TQGQKCYNCGEVGHVSRDC 832
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
P + G+ CY C GH+ C
Sbjct: 833 PTEAKGER---------VCYKCKQPGHVQATC 855
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 58/154 (37%), Gaps = 60/154 (38%)
Query: 37 IVCYKCNNYGHFAREC--ATESVTCYNCSGQGHVAKDCTVKSS----------------- 77
+ ++C + G REC A + TCY C GH+++DCT S
Sbjct: 695 LQLWRCRSSG---RECTAAPKEKTCYRCGQAGHISRDCTSAGSGDSYGNSGGYSGGGGAA 751
Query: 78 --IICYNCNSSGHFARNCPNDS-----------------------SKRCYACHQAGHMAK 112
CY C GH ARNC + CY+C GHMA+
Sbjct: 752 GGQECYKCGQVGHIARNCSQSGGYGSGGYGGATGGGYSGGYGGGRQQTCYSCGGYGHMAR 811
Query: 113 ECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+C T G+ CY CG GH+S DC
Sbjct: 812 DC---TQGQK----------CYNCGEVGHVSRDC 832
>gi|413925352|gb|AFW65284.1| hypothetical protein ZEAMMB73_494862 [Zea mays]
Length = 515
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 72/176 (40%), Gaps = 41/176 (23%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+NC + GH +CP +K C+ C +GH A++C T+ C+ C GH+
Sbjct: 176 CFNCSEEGHVAANCPL--------EKRKKPCFVCGLFGHNAKQC-TQGQDCFICKKGGHM 226
Query: 69 AKDCTVK------SSIICYNCNSSGHFARNCPND------SSKRCYACHQAGHM-----A 111
AKDC K S +C C GH C ND RCY C+Q GH+ +
Sbjct: 227 AKDCPDKHRRNDHQSTLCLKCGEIGHDMFGCTNDYPPDDIEKIRCYVCNQKGHLCCSDFS 286
Query: 112 KECPGQT---------------AGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
+CP Q A + V C+ CG +GH + C KS
Sbjct: 287 DDCPKQISCYNCAQSGHSGLGCAKRRETSAVTTPTLCFKCGEEGHFARGCTKNAKS 342
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 58 TCYNCSGQGHVAKDCTV-KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
TC+NCS +GHVA +C + K C+ C GH A+ C + C+ C + GHMAK+CP
Sbjct: 175 TCFNCSEEGHVAANCPLEKRKKPCFVCGLFGHNAKQC--TQGQDCFICKKGGHMAKDCPD 232
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ S C CG GH + C
Sbjct: 233 KHRRND-----HQSTLCLKCGEIGHDMFGC 257
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 32 GDKVGIVCYKCNNYGHFARECATESV--TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHF 89
G+ + C+ C+ GH A C E C+ C GH AK CT C+ C GH
Sbjct: 169 GETLLETCFNCSEEGHVAANCPLEKRKKPCFVCGLFGHNAKQCTQGQD--CFICKKGGHM 226
Query: 90 ARNCP-----ND-SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHL 142
A++CP ND S C C + GH C T P+ + + CYVC +GHL
Sbjct: 227 AKDCPDKHRRNDHQSTLCLKCGEIGHDMFGC---TNDYPPDDI--EKIRCYVCNQKGHL 280
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC 52
I CYNC GH C ++ A +C+KC GHFAR C
Sbjct: 293 ISCYNCAQSGHSGLGCAKRRETSAV--TTPTLCFKCGEEGHFARGC 336
>gi|330935739|ref|XP_003305108.1| hypothetical protein PTT_17855 [Pyrenophora teres f. teres 0-1]
gi|311318054|gb|EFQ86821.1| hypothetical protein PTT_17855 [Pyrenophora teres f. teres 0-1]
Length = 312
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV--- 57
M T + C+NC GH + CP+ + G + C+ C + GH +R+C
Sbjct: 158 MGGTDRV-CFNCNLPGHNKSECPEPRTGGGGGGRA---CHNCGDEGHISRDCDKPRTGGG 213
Query: 58 ----TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC--PNDSSK-RCYACHQAGHM 110
C+NC +GH+++DC + C NC+ GH +R C P D S+ +C C+ GH
Sbjct: 214 GGGRACHNCGEEGHISRDCDKPRVMKCRNCDEEGHHSRECDKPRDWSRVKCRNCNNYGHG 273
Query: 111 AKECPGQTA 119
K CP A
Sbjct: 274 EKRCPEPPA 282
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 19/123 (15%)
Query: 38 VCYKCNNYGHFARECATES--VTCYNCSGQGHVAKDCTVK------SSIICYNCNSSGHF 89
C+ C GH R+C S C+NC GH DCT + +C+NCN GH
Sbjct: 115 ACFGCGMTGHQKRDCPQGSGGQACFNCGEVGHRKSDCTAPRKPMGGTDRVCFNCNLPGHN 174
Query: 90 ARNCPNDSS------KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLS 143
CP + + C+ C GH++++C K C+ CG +GH+S
Sbjct: 175 KSECPEPRTGGGGGGRACHNCGDEGHISRDC-----DKPRTGGGGGGRACHNCGEEGHIS 229
Query: 144 YDC 146
DC
Sbjct: 230 RDC 232
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 64/170 (37%), Gaps = 40/170 (23%)
Query: 9 CYNCFDFGHYQYSCPQKSSADA-----------------RGDKVGI--VCYKCNNYGHFA 49
C+ C GH + CPQ S A R G VC+ CN GH
Sbjct: 116 CFGCGMTGHQKRDCPQGSGGQACFNCGEVGHRKSDCTAPRKPMGGTDRVCFNCNLPGHNK 175
Query: 50 RECATESV-------TCYNCSGQGHVAKDCTVKSSI------ICYNCNSSGHFARNCPND 96
EC C+NC +GH+++DC + C+NC GH +R+C
Sbjct: 176 SECPEPRTGGGGGGRACHNCGDEGHISRDCDKPRTGGGGGGRACHNCGEEGHISRDCDKP 235
Query: 97 SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+C C + GH ++EC +P + C C + GH C
Sbjct: 236 RVMKCRNCDEEGHHSREC--------DKPRDWSRVKCRNCNNYGHGEKRC 277
>gi|407837810|gb|EKF99870.1| hypothetical protein TCSYLVIO_009208 [Trypanosoma cruzi]
Length = 503
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 66/143 (46%), Gaps = 18/143 (12%)
Query: 7 IQCYNCFDFGHYQYSCP-QKSSADARGDKVGIVCYKCNNYGHFARECA--TESVTCYNCS 63
+ C +C GH++ CP +K A A D VC C + H C ++SV C+ C
Sbjct: 37 VTCRSCGRLGHFKEDCPSEKKRARAEEDGEVSVCRSCGSSRHVKASCPLRSQSVECFQCH 96
Query: 64 GQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
+GH+A C + C+NC S GH A+ C S C+ C AGH + +CP + G+
Sbjct: 97 QRGHMAPTCPLTR---CFNCGSYGHSAQLC--YSRPLCFHCSLAGHRSTDCPMKPKGR-- 149
Query: 124 EPVVDMSLTCYVCGHQGHLSYDC 146
CY C GH +C
Sbjct: 150 --------VCYRCKEPGHEMAEC 164
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 30/144 (20%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCS 63
+ +++C+ C GH +CP C+ C +YGH A+ C + + C++CS
Sbjct: 87 SQSVECFQCHQRGHMAPTCPLTR------------CFNCGSYGHSAQLCYSRPL-CFHCS 133
Query: 64 GQGHVAKDCTVKSS-IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKS 122
GH + DC +K +CY C GH C + C+ C+QAGH +CP
Sbjct: 134 LAGHRSTDCPMKPKGRVCYRCKEPGHEMAECTQ--TALCHMCNQAGHFIAQCP------- 184
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDC 146
C +C +GH S C
Sbjct: 185 -------EAVCNLCNERGHTSSAC 201
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 58/133 (43%), Gaps = 20/133 (15%)
Query: 36 GIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI----------ICYNCNS 85
G+ C C+ H R+C VTC +C GH +DC + +C +C S
Sbjct: 18 GLTCSNCSATDHLRRDCPL--VTCRSCGRLGHFKEDCPSEKKRARAEEDGEVSVCRSCGS 75
Query: 86 SGHFARNCPNDS-SKRCYACHQAGHMAKECPGQ------TAGKSPEPVVDMSLTCYVCGH 138
S H +CP S S C+ CHQ GHMA CP + G S + L C+ C
Sbjct: 76 SRHVKASCPLRSQSVECFQCHQRGHMAPTCPLTRCFNCGSYGHSAQLCYSRPL-CFHCSL 134
Query: 139 QGHLSYDCKLVQK 151
GH S DC + K
Sbjct: 135 AGHRSTDCPMKPK 147
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 54 TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMA-- 111
+ +TC NCS H+ +DC + + C +C GHF +CP++ KR A + G ++
Sbjct: 16 SRGLTCSNCSATDHLRRDCPL---VTCRSCGRLGHFKEDCPSE-KKRARA-EEDGEVSVC 70
Query: 112 KECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
+ C K+ P+ S+ C+ C +GH++ C L +
Sbjct: 71 RSCGSSRHVKASCPLRSQSVECFQCHQRGHMAPTCPLTR 109
>gi|154304431|ref|XP_001552620.1| hypothetical protein BC1G_09091 [Botryotinia fuckeliana B05.10]
Length = 206
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 63/144 (43%), Gaps = 31/144 (21%)
Query: 39 CYKCNNYGHFARECATESVT-CYNCSGQGHVAKDCTV-KSSIICYNCNSSGHFARNCPND 96
C+ C GH AREC + CYNC GH+++DC +CY C +SGH + +C N
Sbjct: 16 CFTCGTEGHQARECPSRGPPKCYNCDNPGHLSRDCPEGPKEKVCYRCGTSGHISNDCSNP 75
Query: 97 SS--------------KRCYACHQAGHMAKECP---------------GQTAGKSPEPVV 127
+ ++CY C + GH+A+ CP G G
Sbjct: 76 PTEGAGRGGGYGGGGGQQCYKCSKIGHIARNCPEAGGYGGNQGYGGNQGGYGGGFGGGAR 135
Query: 128 DMSLTCYVCGHQGHLSYDCKLVQK 151
S TC+ CG GHLS DC QK
Sbjct: 136 QGSQTCFSCGGYGHLSRDCTQGQK 159
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGH 67
QCY C GH +CP+ G +G AR+ S TC++C G GH
Sbjct: 93 QCYKCSKIGHIARNCPEAGGYGGNQGYGGNQGGYGGGFGGGARQ---GSQTCFSCGGYGH 149
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPNDSS--KRCYACHQAGHMAKECP 115
+++DCT CYNC GH +R+C ++S +RCY C Q GH +CP
Sbjct: 150 LSRDCTQGQK--CYNCGEVGHLSRDCSQETSEARRCYECKQEGHEKLDCP 197
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 74/195 (37%), Gaps = 71/195 (36%)
Query: 1 MSSTSTIQ-------CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC- 52
M S +++Q C+ C GH CP + CY C+N GH +R+C
Sbjct: 1 MDSFTSLQGGAPNRGCFTCGTEGHQARECPSRGPPK---------CYNCDNPGHLSRDCP 51
Query: 53 -ATESVTCYNCSGQGHVAKDCTVKSSII--------------CYNCNSSGHFARNCPN-- 95
+ CY C GH++ DC+ + CY C+ GH ARNCP
Sbjct: 52 EGPKEKVCYRCGTSGHISNDCSNPPTEGAGRGGGYGGGGGQQCYKCSKIGHIARNCPEAG 111
Query: 96 ------------------------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSL 131
S+ C++C GH++++C T G+
Sbjct: 112 GYGGNQGYGGNQGGYGGGFGGGARQGSQTCFSCGGYGHLSRDC---TQGQK--------- 159
Query: 132 TCYVCGHQGHLSYDC 146
CY CG GHLS DC
Sbjct: 160 -CYNCGEVGHLSRDC 173
>gi|357156367|ref|XP_003577432.1| PREDICTED: uncharacterized protein LOC100831383 isoform 2
[Brachypodium distachyon]
Length = 464
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 29/164 (17%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+NC + GH +C +K C+ C +GH A++C T+ C+ C GH+
Sbjct: 171 CFNCGEEGHVATNCTM--------EKRKKPCFICGLFGHIAKQC-TQGQDCFICKKGGHM 221
Query: 69 AKDC-------TVKSSIICYNCNSSGHFARNCPNDSSK------RCYACHQAGHM----- 110
AKDC T +S+ +C C GH C ND + +CY C Q+GH+
Sbjct: 222 AKDCPDKHNINTQQSTTLCLRCGEIGHDMFACTNDYPRDDVKEIKCYVCKQSGHLCCTDF 281
Query: 111 AKECPGQTAGKSPEP--VVDMSLTCYVCGHQGHLSYDCKLVQKS 152
+ CP + K V CY CG +GH + C + S
Sbjct: 282 SDNCPKEGCAKQRRETSVATTPTLCYKCGKEGHFARGCTNIANS 325
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 58 TCYNCSGQGHVAKDCTV-KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
TC+NC +GHVA +CT+ K C+ C GH A+ C + C+ C + GHMAK+CP
Sbjct: 170 TCFNCGEEGHVATNCTMEKRKKPCFICGLFGHIAKQCTQ--GQDCFICKKGGHMAKDCPD 227
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ + + + C CG GH + C
Sbjct: 228 KHNINTQQ----STTLCLRCGEIGHDMFAC 253
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 11/112 (9%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSG 64
ST C C + GH ++C ++ R D I CY C GH C T+ NC
Sbjct: 236 STTLCLRCGEIGHDMFAC---TNDYPRDDVKEIKCYVCKQSGHL---CCTDFSD--NCPK 287
Query: 65 QG---HVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKE 113
+G + + +CY C GHFAR C N ++ + + H K+
Sbjct: 288 EGCAKQRRETSVATTPTLCYKCGKEGHFARGCTNIANSDRFKGELSAHSRKK 339
>gi|75214630|gb|ABA18102.1| zinc knuckle family protein [Olimarabidopsis pumila]
Length = 369
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 65/148 (43%), Gaps = 29/148 (19%)
Query: 28 ADARG---DKVGIVCYKCNNYGHFARECATESVT----------------CYNCSGQGHV 68
+D RG K G CYKC GH+AR+C +S CY C QGH
Sbjct: 217 SDTRGYQIAKTGTPCYKCGKEGHWARDCTLQSPIPPSEMGPVRSTSAAGECYKCGKQGHW 276
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVD 128
A+DCT +S Y + SS CY C + GH A++C GQ+ + +
Sbjct: 277 ARDCTAQSGNPTYEPGKVKSSS------SSGECYKCGKQGHWARDCTGQSGNQQFQSGQA 330
Query: 129 MSLT----CYVCGHQGHLSYDCKLVQKS 152
S + CY CG GH + DC L ++
Sbjct: 331 KSTSSAGDCYKCGKPGHWARDCTLAAQT 358
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 45/122 (36%), Gaps = 37/122 (30%)
Query: 9 CYNCFDFGHYQYSC------PQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---- 58
CY C GH+ C P R CYKC GH+AR+C +S
Sbjct: 231 CYKCGKEGHWARDCTLQSPIPPSEMGPVRSTSAAGECYKCGKQGHWARDCTAQSGNPTYE 290
Query: 59 ------------CYNCSGQGHVAKDCT---------------VKSSIICYNCNSSGHFAR 91
CY C QGH A+DCT S+ CY C GH+AR
Sbjct: 291 PGKVKSSSSSGECYKCGKQGHWARDCTGQSGNQQFQSGQAKSTSSAGDCYKCGKPGHWAR 350
Query: 92 NC 93
+C
Sbjct: 351 DC 352
>gi|343416638|emb|CCD20307.1| hypothetical protein, conserved in T. vivax, (fragment)
[Trypanosoma vivax Y486]
Length = 241
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 30/144 (20%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQ 65
+++C+ C GH CP+ C+ C ++GH ++ CA++SV C++CS
Sbjct: 75 SVECFQCHQNGHMMPMCPR------------TRCFNCGHFGHSSQLCASKSV-CFHCSMP 121
Query: 66 GHVAKDCTVKS-SIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPE 124
GH + +C K +CY C GH CP S +C+ Q GH+ +CP
Sbjct: 122 GHTSTECPRKDMGRLCYRCKEPGHDMAKCPQ--SPQCHMWDQTGHLVAQCP--------- 170
Query: 125 PVVDMSLTCYVCGHQGHLSYDCKL 148
+ C C +GH++ CK+
Sbjct: 171 -----EVLCNRCHQKGHMASTCKM 189
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 63/167 (37%), Gaps = 38/167 (22%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA------- 53
M + S C NCF GH + CP I C C+ GHF +C
Sbjct: 1 MKNISPATCKNCFSTGHLRRDCPL------------IKCAACSRLGHFKEDCPHRRKRPR 48
Query: 54 --TESVTCYNCSGQGHVAKDCTVK-SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
++ C +C H C + S+ C+ C+ +GH CP RC+ C GH
Sbjct: 49 PDSDIGICRSCGSSSHAQAKCPERIKSVECFQCHQNGHMMPMCPR---TRCFNCGHFGHS 105
Query: 111 AKEC-----------PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++ C PG T+ + P DM CY C GH C
Sbjct: 106 SQLCASKSVCFHCSMPGHTSTECPR--KDMGRLCYRCKEPGHDMAKC 150
>gi|116197647|ref|XP_001224635.1| hypothetical protein CHGG_06979 [Chaetomium globosum CBS 148.51]
gi|88178258|gb|EAQ85726.1| hypothetical protein CHGG_06979 [Chaetomium globosum CBS 148.51]
Length = 446
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 16/122 (13%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCN-------NYGHFARECATESVT-C 59
+C NC GH SCPQ A + I+C+ CN + GHF+R+C + C
Sbjct: 270 KCSNCDGLGHISKSCPQDKVEKA--NTFEILCFNCNEPGHRVRDSGHFSRDCPQGGPSGC 327
Query: 60 YNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCP--NDSSK-RCYACHQAGHMAKE 113
NC +GH+++DCT ++ C NC+ GH + CP D ++ +C C + GH
Sbjct: 328 RNCGQEGHMSRDCTEPRNMALVQCRNCDEFGHMNKECPKPRDMARVKCANCQEMGHYKSR 387
Query: 114 CP 115
CP
Sbjct: 388 CP 389
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 22/102 (21%)
Query: 59 CYNCSGQGHVAKDCTVKS-------SIICYNCNS-------SGHFARNCPNDSSKRCYAC 104
C NC G GH++K C I+C+NCN SGHF+R+CP C C
Sbjct: 271 CSNCDGLGHISKSCPQDKVEKANTFEILCFNCNEPGHRVRDSGHFSRDCPQGGPSGCRNC 330
Query: 105 HQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
Q GHM+++C EP + C C GH++ +C
Sbjct: 331 GQEGHMSRDC--------TEPRNMALVQCRNCDEFGHMNKEC 364
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 11/88 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-ESVTCYNCSGQGH 67
C+NC + GH + CP + C +CN GH++++C + C C H
Sbjct: 61 CFNCGESGHNKADCPNPRV-------LSGACRRCNEEGHWSKDCPNAPPMLCKECQSPDH 113
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPN 95
V KDC + +C NC +GH C N
Sbjct: 114 VVKDCPDR---VCKNCRETGHTISQCKN 138
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 38 VCYKCNNYGHFARECATESV---TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
C+ C GH +C V C C+ +GH +KDC ++C C S H ++CP
Sbjct: 60 ACFNCGESGHNKADCPNPRVLSGACRRCNEEGHWSKDCPNAPPMLCKECQSPDHVVKDCP 119
Query: 95 NDSSKRCYACHQAGHMAKEC 114
+ + C C + GH +C
Sbjct: 120 D---RVCKNCRETGHTISQC 136
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 16/95 (16%)
Query: 59 CYNCSGQGHVAKDCTVKSSI--ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
C+NC GH DC + C CN GH++++CPN C C H+ K+CP
Sbjct: 61 CFNCGESGHNKADCPNPRVLSGACRRCNEEGHWSKDCPNAPPMLCKECQSPDHVVKDCPD 120
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
+ C C GH CK +K
Sbjct: 121 R--------------VCKNCRETGHTISQCKNSRK 141
>gi|171677448|ref|XP_001903675.1| hypothetical protein [Podospora anserina S mat+]
gi|170936792|emb|CAP61450.1| unnamed protein product [Podospora anserina S mat+]
Length = 229
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 63/151 (41%), Gaps = 13/151 (8%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCY 60
+T + QCY+C GH Q CP G CY C H AR C A +
Sbjct: 53 TTKSKQCYHCQGVGHVQAECPTMRLNGGPGGPHN-RCYTCGQPNHIARNCPSAQGGMAPG 111
Query: 61 NCSGQGHVAKD-----CTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
G+G CY C H+AR+C + +CYAC + GH++++C
Sbjct: 112 PMPGRGGFGPARGGFHPGGARHATCYKCGGPNHYARDC-QAQAMKCYACGKLGHISRDCT 170
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G P+ TCY CG GH+S DC
Sbjct: 171 APNGG----PLNTAGKTCYQCGEAGHISRDC 197
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 44/121 (36%), Gaps = 33/121 (27%)
Query: 47 HFARECA----TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCY 102
H + EC T+S CY+C G GHV +C P RCY
Sbjct: 43 HESNECPLPRTTKSKQCYHCQGVGHVQAECPTMR-------------LNGGPGGPHNRCY 89
Query: 103 ACHQAGHMAKECPGQTAGKSPEPVVDMS----------------LTCYVCGHQGHLSYDC 146
C Q H+A+ CP G +P P+ TCY CG H + DC
Sbjct: 90 TCGQPNHIARNCPSAQGGMAPGPMPGRGGFGPARGGFHPGGARHATCYKCGGPNHYARDC 149
Query: 147 K 147
+
Sbjct: 150 Q 150
>gi|302417037|ref|XP_003006350.1| zinc finger protein GIS2 [Verticillium albo-atrum VaMs.102]
gi|261355766|gb|EEY18194.1| zinc finger protein GIS2 [Verticillium albo-atrum VaMs.102]
Length = 147
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 15/106 (14%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
CYKC HFAR+C +++ CY C GH+++DCT + G N +
Sbjct: 53 CYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNG---------GPL-----NTAG 98
Query: 99 KRCYACHQAGHMAKECPGQTA-GKSPEPVVDMSLTCYVCGHQGHLS 143
K CY C +AGH++++CP + A G+ P VVD++ T + L+
Sbjct: 99 KTCYQCGEAGHISRDCPQKVANGEIPNDVVDLNATATLAPPVAPLA 144
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
CY C HFAR+C + +CYAC + GH++++C G P+ TCY CG
Sbjct: 53 CYKCGGPNHFARDC-QAQAMKCYACGKLGHISRDCTAPNGG----PLNTAGKTCYQCGEA 107
Query: 140 GHLSYDCK 147
GH+S DC
Sbjct: 108 GHISRDCP 115
>gi|403291696|ref|XP_003936912.1| PREDICTED: cellular nucleic acid-binding protein-like [Saimiri
boliviensis boliviensis]
Length = 169
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 65/149 (43%), Gaps = 29/149 (19%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESV 57
S++ + CY C + GH +C +G +CY C GH A++C
Sbjct: 40 STSLSYTCYRCGESGHQAKNCV-----------LGNICYNCGRSGHIAKDCNEPKRERDQ 88
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
CY C GH+A DC + CY C GH ++C + +CY C + GHMA C
Sbjct: 89 CCYTCGRPGHLACDCDRQKEQKCYACGQLGHIQKDC---AKVKCYRCGETGHMAISCS-- 143
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ + CY CG GHL+ +C
Sbjct: 144 ---------KAIQVNCYRCGKPGHLAREC 163
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 50/98 (51%), Gaps = 16/98 (16%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAK 112
S TCY C GH AK+C + + ICYNC SGH A++C +R CY C + GH+A
Sbjct: 44 SYTCYRCGESGHQAKNCVLGN--ICYNCGRSGHIAKDCNEPKRERDQCCYTCGRPGHLAC 101
Query: 113 ECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
+C Q K CY CG GH+ DC V+
Sbjct: 102 DCDRQKEQK-----------CYACGQLGHIQKDCAKVK 128
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 51/111 (45%), Gaps = 10/111 (9%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE-SVTCYNCSGQGH 67
CYNC GH C + + CY C GH A +C + CY C GH
Sbjct: 66 CYNCGRSGHIAKDCNEPKRERDQ------CCYTCGRPGHLACDCDRQKEQKCYACGQLGH 119
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQT 118
+ KDC + + CY C +GH A +C CY C + GH+A+ECP +
Sbjct: 120 IQKDC---AKVKCYRCGETGHMAISCSKAIQVNCYRCGKPGHLARECPSEA 167
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CY C GH C ++ CY C GH ++CA V CY C GH+
Sbjct: 90 CYTCGRPGHLACDCDRQKEQK---------CYACGQLGHIQKDCA--KVKCYRCGETGHM 138
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
A C+ + CY C GH AR CP++++
Sbjct: 139 AISCSKAIQVNCYRCGKPGHLARECPSEAT 168
>gi|396477991|ref|XP_003840426.1| similar to zinc knuckle domain-containing protein [Leptosphaeria
maculans JN3]
gi|312216998|emb|CBX96947.1| similar to zinc knuckle domain-containing protein [Leptosphaeria
maculans JN3]
Length = 196
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 36 GIVCYKCNNYGHFARECATESV-TCYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARNC 93
G CY C + H A EC T+ TCYNC +GHV+++CT ++ CY C +GH +R C
Sbjct: 12 GRGCYNCGDNSHRAAECPTKGTPTCYNCGEKGHVSRECTSPQAEKTCYRCGGTGHISREC 71
Query: 94 PNDSS------------KRCYACHQAGHMAKECPGQTAGKSPEPVVD------------- 128
D + CY C Q GH+A+ C +
Sbjct: 72 TKDGGAQMGGRGGGSGGQECYKCGQQGHIARNCSQGGGYGGQQQGGYGGRGGYGGGQGGY 131
Query: 129 ---MSLTCYVCGHQGHLSYDCKLVQK 151
TCY CG GH+S DC QK
Sbjct: 132 GGARQTTCYSCGGFGHMSRDCTQGQK 157
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 63/168 (37%), Gaps = 57/168 (33%)
Query: 3 STSTIQCYNCFDFGHYQYSC--PQKSSADARGDKVGIV---------------------- 38
+ T CYNC + GH C PQ R G +
Sbjct: 30 TKGTPTCYNCGEKGHVSRECTSPQAEKTCYRCGGTGHISRECTKDGGAQMGGRGGGSGGQ 89
Query: 39 -CYKCNNYGHFARECA----------------------------TESVTCYNCSGQGHVA 69
CYKC GH AR C+ TCY+C G GH++
Sbjct: 90 ECYKCGQQGHIARNCSQGGGYGGQQQGGYGGRGGYGGGQGGYGGARQTTCYSCGGFGHMS 149
Query: 70 KDCTVKSSIICYNCNSSGHFARNCPNDSS--KRCYACHQAGHMAKECP 115
+DCT CYNC GH +R+CP ++S + CY C Q GH+ CP
Sbjct: 150 RDCT--QGQKCYNCGEVGHLSRDCPQETSSERVCYRCKQPGHVQSACP 195
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 70/191 (36%), Gaps = 64/191 (33%)
Query: 9 CYNCFDFGHYQYSCPQKS-------------SADARGDKVGIVCYKCNNYGHFARECATE 55
CYNC D H CP K S + + CY+C GH +REC +
Sbjct: 15 CYNCGDNSHRAAECPTKGTPTCYNCGEKGHVSRECTSPQAEKTCYRCGGTGHISRECTKD 74
Query: 56 SVT-------------CYNCSGQGHVAKDCTVKS-------------------------- 76
CY C QGH+A++C+
Sbjct: 75 GGAQMGGRGGGSGGQECYKCGQQGHIARNCSQGGGYGGQQQGGYGGRGGYGGGQGGYGGA 134
Query: 77 -SIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
CY+C GH +R+C ++CY C + GH++++CP +T+ + CY
Sbjct: 135 RQTTCYSCGGFGHMSRDC--TQGQKCYNCGEVGHLSRDCPQETSSE---------RVCYR 183
Query: 136 CGHQGHLSYDC 146
C GH+ C
Sbjct: 184 CKQPGHVQSAC 194
>gi|15229170|ref|NP_189872.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
gi|7529257|emb|CAB86673.1| putative protein [Arabidopsis thaliana]
gi|17529084|gb|AAL38752.1| unknown protein [Arabidopsis thaliana]
gi|22136980|gb|AAM91719.1| unknown protein [Arabidopsis thaliana]
gi|332644235|gb|AEE77756.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
Length = 372
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 64/137 (46%), Gaps = 24/137 (17%)
Query: 28 ADARG---DKVGIVCYKCNNYGHFARECATESVT-----------CYNCSGQGHVAKDCT 73
+D RG K G CYKC GH+AR+C +S T C+ C GH ++DCT
Sbjct: 225 SDTRGYQNAKTGTPCYKCGKEGHWARDCTVQSDTGPVKSTSAAGDCFKCGKPGHWSRDCT 284
Query: 74 VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLT- 132
+S Y G + SS CY C + GH +++C GQ++ + + S +
Sbjct: 285 AQSGNPKYE---PGQMKS---SSSSGECYKCGKQGHWSRDCTGQSSNQQFQSGQAKSTSS 338
Query: 133 ---CYVCGHQGHLSYDC 146
CY CG GH S DC
Sbjct: 339 TGDCYKCGKAGHWSRDC 355
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 25/129 (19%)
Query: 9 CYNCFDFGHYQYSCP-QKSSADARGDKVGIVCYKCNNYGHFARECATESVT--------- 58
CY C GH+ C Q + + C+KC GH++R+C +S
Sbjct: 239 CYKCGKEGHWARDCTVQSDTGPVKSTSAAGDCFKCGKPGHWSRDCTAQSGNPKYEPGQMK 298
Query: 59 -------CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMA 111
CY C QGH ++DCT +SS N + S+ CY C +AGH +
Sbjct: 299 SSSSSGECYKCGKQGHWSRDCTGQSS------NQQFQSGQAKSTSSTGDCYKCGKAGHWS 352
Query: 112 KEC--PGQT 118
++C P QT
Sbjct: 353 RDCTSPAQT 361
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 2 SSTSTIQCYNCFDFGHYQYSC------PQKSSADARGDKVGIVCYKCNNYGHFARECATE 55
S+++ C+ C GH+ C P+ + CYKC GH++R+C +
Sbjct: 263 STSAAGDCFKCGKPGHWSRDCTAQSGNPKYEPGQMKSSSSSGECYKCGKQGHWSRDCTGQ 322
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
S SGQ + S+ CY C +GH++R+C
Sbjct: 323 SSNQQFQSGQAK-----STSSTGDCYKCGKAGHWSRDC 355
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSS------ADARGDKVGIVCYKCNNYGHFARECATE 55
SS+S+ +CY C GH+ C +SS A+ CYKC GH++R+C +
Sbjct: 299 SSSSSGECYKCGKQGHWSRDCTGQSSNQQFQSGQAKSTSSTGDCYKCGKAGHWSRDCTSP 358
Query: 56 SVT 58
+ T
Sbjct: 359 AQT 361
>gi|71651603|ref|XP_814476.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70879451|gb|EAN92625.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 503
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 7 IQCYNCFDFGHYQYSCP-QKSSADARGDKVGIVCYKCNNYGHFARECA--TESVTCYNCS 63
+ C C GH++ CP +K A A D VC C + H C ++SV C+ C
Sbjct: 37 VTCRACGRLGHFKEDCPSEKKRARAEEDGEVSVCRSCGSSRHVKASCPLRSQSVECFQCH 96
Query: 64 GQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKS- 122
+GH+A C + C+NC S GH ++ C S C+ C AGH + +CP + G+
Sbjct: 97 QRGHMAPTCPLTR---CFNCGSYGHSSQLC--YSRPLCFHCSLAGHRSTDCPMKPKGRVC 151
Query: 123 ---PEPVVDM-----SLTCYVCGHQGHLSYDC 146
EP +M + C++C GHL C
Sbjct: 152 YRCKEPGHEMAECTQTALCHMCNQAGHLVAQC 183
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 30/144 (20%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCS 63
+ +++C+ C GH +CP C+ C +YGH ++ C + + C++CS
Sbjct: 87 SQSVECFQCHQRGHMAPTCPLTR------------CFNCGSYGHSSQLCYSRPL-CFHCS 133
Query: 64 GQGHVAKDCTVKSS-IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKS 122
GH + DC +K +CY C GH C + C+ C+QAGH+ +CP
Sbjct: 134 LAGHRSTDCPMKPKGRVCYRCKEPGHEMAEC--TQTALCHMCNQAGHLVAQCP------- 184
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDC 146
C +C +GH + C
Sbjct: 185 -------EAVCNLCHERGHTASAC 201
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 57/133 (42%), Gaps = 20/133 (15%)
Query: 36 GIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI----------ICYNCNS 85
G+ C C+ H R+C VTC C GH +DC + +C +C S
Sbjct: 18 GLTCSNCSATDHLRRDCPL--VTCRACGRLGHFKEDCPSEKKRARAEEDGEVSVCRSCGS 75
Query: 86 SGHFARNCPNDS-SKRCYACHQAGHMAKECPGQ------TAGKSPEPVVDMSLTCYVCGH 138
S H +CP S S C+ CHQ GHMA CP + G S + L C+ C
Sbjct: 76 SRHVKASCPLRSQSVECFQCHQRGHMAPTCPLTRCFNCGSYGHSSQLCYSRPL-CFHCSL 134
Query: 139 QGHLSYDCKLVQK 151
GH S DC + K
Sbjct: 135 AGHRSTDCPMKPK 147
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 54 TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMA-- 111
+ +TC NCS H+ +DC + + C C GHF +CP++ KR A + G ++
Sbjct: 16 SRGLTCSNCSATDHLRRDCPL---VTCRACGRLGHFKEDCPSE-KKRARA-EEDGEVSVC 70
Query: 112 KECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
+ C K+ P+ S+ C+ C +GH++ C L +
Sbjct: 71 RSCGSSRHVKASCPLRSQSVECFQCHQRGHMAPTCPLTR 109
>gi|261192892|ref|XP_002622852.1| zinc knuckle domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239588987|gb|EEQ71630.1| zinc knuckle domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|327352663|gb|EGE81520.1| hypothetical protein BDDG_04462 [Ajellomyces dermatitidis ATCC
18188]
Length = 190
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 62/142 (43%), Gaps = 29/142 (20%)
Query: 39 CYKCNNYGHFARECATESV-TCYNCSGQGHVAKDCTVK-SSIICYNCNSSGHFARNCPND 96
C+ C H AR+C + TCYNC GQGHV+++CT CY C +GH +R+C +
Sbjct: 10 CFNCGEASHQARDCPKKGTPTCYNCGGQGHVSRECTAAPKEKTCYRCGQTGHISRDCTSA 69
Query: 97 SS-----------------KRCYACHQAGHMAKECP----------GQTAGKSPEPVVDM 129
S + CY C Q GH+A+ C G G
Sbjct: 70 GSGDNYTSGGYSGGGAAGGQECYKCGQVGHIARNCSQSGGYGSAGYGGAGGYGGGYGGGR 129
Query: 130 SLTCYVCGHQGHLSYDCKLVQK 151
TCY CG GH++ DC QK
Sbjct: 130 QQTCYSCGGYGHMARDCTQGQK 151
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 70/183 (38%), Gaps = 62/183 (33%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQG 66
C+NC + H CP+K + CY C GH +REC A + TCY C G
Sbjct: 10 CFNCGEASHQARDCPKKGTP---------TCYNCGGQGHVSRECTAAPKEKTCYRCGQTG 60
Query: 67 HVAKDCTVKSS-----------------IICYNCNSSGHFARNCPNDS------------ 97
H+++DCT S CY C GH ARNC
Sbjct: 61 HISRDCTSAGSGDNYTSGGYSGGGAAGGQECYKCGQVGHIARNCSQSGGYGSAGYGGAGG 120
Query: 98 ---------SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+ CY+C GHMA++C T G+ CY CG GH+S DC
Sbjct: 121 YGGGYGGGRQQTCYSCGGYGHMARDC---TQGQK----------CYNCGEVGHVSRDCPT 167
Query: 149 VQK 151
K
Sbjct: 168 EAK 170
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 57/139 (41%), Gaps = 34/139 (24%)
Query: 9 CYNCFDFGHYQYSCPQKSSAD--------ARGDKVGIVCYKCNNYGHFARECA------- 53
CY C GH C S D G G CYKC GH AR C+
Sbjct: 53 CYRCGQTGHISRDCTSAGSGDNYTSGGYSGGGAAGGQECYKCGQVGHIARNCSQSGGYGS 112
Query: 54 ---------------TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS- 97
TCY+C G GH+A+DCT CYNC GH +R+CP ++
Sbjct: 113 AGYGGAGGYGGGYGGGRQQTCYSCGGYGHMARDCT--QGQKCYNCGEVGHVSRDCPTEAK 170
Query: 98 -SKRCYACHQAGHMAKECP 115
+ CY C Q GH+ CP
Sbjct: 171 GERVCYKCKQTGHVQAACP 189
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 45/102 (44%), Gaps = 15/102 (14%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGI------------VCYKCNNYGHFARECATE 55
+CY C GH +C Q + G CY C YGH AR+C T+
Sbjct: 90 ECYKCGQVGHIARNCSQSGGYGSAGYGGAGGYGGGYGGGRQQTCYSCGGYGHMARDC-TQ 148
Query: 56 SVTCYNCSGQGHVAKDC--TVKSSIICYNCNSSGHFARNCPN 95
CYNC GHV++DC K +CY C +GH CPN
Sbjct: 149 GQKCYNCGEVGHVSRDCPTEAKGERVCYKCKQTGHVQAACPN 190
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC-PNDSSKRCYACHQAGHMAKEC 114
S C+NC H A+DC K + CYNC GH +R C K CY C Q GH++++C
Sbjct: 7 SRGCFNCGEASHQARDCPKKGTPTCYNCGGQGHVSRECTAAPKEKTCYRCGQTGHISRDC 66
Query: 115 PGQTAGKS------PEPVVDMSLTCYVCGHQGHLSYDC 146
+G + CY CG GH++ +C
Sbjct: 67 TSAGSGDNYTSGGYSGGGAAGGQECYKCGQVGHIARNC 104
>gi|115704753|ref|XP_786898.2| PREDICTED: DNA-binding protein HEXBP-like isoform 2
[Strongylocentrotus purpuratus]
Length = 186
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 57/140 (40%), Gaps = 31/140 (22%)
Query: 38 VCYKCNNYGHFARECA----------TESVTCYNCSGQGHVAKDCTVKSSI--------- 78
CY C GH +R+C +CYNC GH+A+DC+
Sbjct: 34 TCYNCGQPGHISRDCPQGDSRGGGRGGGDRSCYNCGEPGHIARDCSSGGRGGGGGRGGSD 93
Query: 79 -ICYNCNSSGHFARNCPNDSSKR-----------CYACHQAGHMAKECPGQTAGKSPEPV 126
CY C ++ H AR CPN CY C Q GH++++CP +
Sbjct: 94 RACYGCGATDHMARECPNSKGDSRGGGRGGGDRTCYNCGQPGHISRDCPQGDSRGGGGGR 153
Query: 127 VDMSLTCYVCGHQGHLSYDC 146
TCY CG GH+S DC
Sbjct: 154 GGGDRTCYKCGITGHISRDC 173
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 53/139 (38%), Gaps = 33/139 (23%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----------- 57
CYNC GH CPQ S CY C GH AR+C++
Sbjct: 35 CYNCGQPGHISRDCPQGDSRGGGRGGGDRSCYNCGEPGHIARDCSSGGRGGGGGRGGSDR 94
Query: 58 TCYNCSGQGHVAKDCT-----------VKSSIICYNCNSSGHFARNCPNDSSKR------ 100
CY C H+A++C CYNC GH +R+CP S+
Sbjct: 95 ACYGCGATDHMARECPNSKGDSRGGGRGGGDRTCYNCGQPGHISRDCPQGDSRGGGGGRG 154
Query: 101 -----CYACHQAGHMAKEC 114
CY C GH++++C
Sbjct: 155 GGDRTCYKCGITGHISRDC 173
>gi|71654802|ref|XP_816013.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70881113|gb|EAN94162.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 503
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 7 IQCYNCFDFGHYQYSCP-QKSSADARGDKVGIVCYKCNNYGHFARECA--TESVTCYNCS 63
+ C C GH++ CP +K A A D VC C + H C ++SV C+ C
Sbjct: 37 VTCRACGRLGHFKEDCPSEKKRARAEEDGEVSVCRSCGSSRHVKASCPLRSQSVECFQCH 96
Query: 64 GQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKS- 122
+GH+A C + C+NC S GH ++ C S C+ C AGH + +CP + G+
Sbjct: 97 QRGHMAPTCPLTR---CFNCGSYGHSSQLC--YSRPLCFHCSLAGHRSTDCPMKPKGRVC 151
Query: 123 ---PEPVVDM-----SLTCYVCGHQGHLSYDC 146
EP +M + C++C GHL C
Sbjct: 152 YRCKEPGHEMAECTQTALCHMCNQAGHLVAQC 183
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 30/144 (20%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCS 63
+ +++C+ C GH +CP C+ C +YGH ++ C + + C++CS
Sbjct: 87 SQSVECFQCHQRGHMAPTCPLTR------------CFNCGSYGHSSQLCYSRPL-CFHCS 133
Query: 64 GQGHVAKDCTVKSS-IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKS 122
GH + DC +K +CY C GH C + C+ C+QAGH+ +CP
Sbjct: 134 LAGHRSTDCPMKPKGRVCYRCKEPGHEMAEC--TQTALCHMCNQAGHLVAQCP------- 184
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDC 146
C +C +GH + C
Sbjct: 185 -------EAVCNLCHERGHTASAC 201
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 57/133 (42%), Gaps = 20/133 (15%)
Query: 36 GIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI----------ICYNCNS 85
G+ C C+ H R+C VTC C GH +DC + +C +C S
Sbjct: 18 GLTCSNCSATDHLRRDCPL--VTCRACGRLGHFKEDCPSEKKRARAEEDGEVSVCRSCGS 75
Query: 86 SGHFARNCPNDS-SKRCYACHQAGHMAKECPGQ------TAGKSPEPVVDMSLTCYVCGH 138
S H +CP S S C+ CHQ GHMA CP + G S + L C+ C
Sbjct: 76 SRHVKASCPLRSQSVECFQCHQRGHMAPTCPLTRCFNCGSYGHSSQLCYSRPL-CFHCSL 134
Query: 139 QGHLSYDCKLVQK 151
GH S DC + K
Sbjct: 135 AGHRSTDCPMKPK 147
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 54 TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMA-- 111
+ +TC NCS H+ +DC + + C C GHF +CP++ KR A + G ++
Sbjct: 16 SRGLTCSNCSATDHLRRDCPL---VTCRACGRLGHFKEDCPSE-KKRARA-EEDGEVSVC 70
Query: 112 KECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
+ C K+ P+ S+ C+ C +GH++ C L +
Sbjct: 71 RSCGSSRHVKASCPLRSQSVECFQCHQRGHMAPTCPLTR 109
>gi|212722300|ref|NP_001131354.1| uncharacterized protein LOC100192675 [Zea mays]
gi|194691294|gb|ACF79731.1| unknown [Zea mays]
gi|414873649|tpg|DAA52206.1| TPA: hypothetical protein ZEAMMB73_492803 [Zea mays]
Length = 168
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 14/97 (14%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
C NC GH+ CP +C CN GHFA EC ++V C+NC G
Sbjct: 59 FACKNCRRPGHFAKECPS-----------APMCNNCNLPGHFAAECTLQTV-CWNCKESG 106
Query: 67 HVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYA 103
H+A +C K+ +C+ CN +GH AR+CP + YA
Sbjct: 107 HIASEC--KNEALCHACNKTGHLARDCPTSGANVKYA 141
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 17/88 (19%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQT 118
C NC GH AK+C S+ +C NCN GHFA C C+ C ++GH+A EC +
Sbjct: 61 CKNCRRPGHFAKEC--PSAPMCNNCNLPGHFAAEC--TLQTVCWNCKESGHIASECKNEA 116
Query: 119 AGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C+ C GHL+ DC
Sbjct: 117 -------------LCHACNKTGHLARDC 131
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 15/70 (21%)
Query: 78 IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCG 137
C NC GHFA+ CP S+ C C+ GH A EC QT C+ C
Sbjct: 59 FACKNCRRPGHFAKECP--SAPMCNNCNLPGHFAAECTLQT-------------VCWNCK 103
Query: 138 HQGHLSYDCK 147
GH++ +CK
Sbjct: 104 ESGHIASECK 113
>gi|225562591|gb|EEH10870.1| zinc knuckle domain-containing protein [Ajellomyces capsulatus
G186AR]
Length = 217
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 15 FGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-----------TCYNCS 63
GH Q CP + G G CY C+ GH AR C + + +N +
Sbjct: 49 LGHVQADCP---TLRISGGTTGGRCYICHLPGHLARTCPSAGMHGAGRGAPVIRGGFNSA 105
Query: 64 GQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
+G A + +CY C HFAR+C + K CYAC + GH++++CP G
Sbjct: 106 FRGGFAG---YSRTAMCYKCGGPNHFARDCQAQAMK-CYACGKLGHISRDCPAPNGG--- 158
Query: 124 EPVVDMSLTCYVCGHQGHLSYDC 146
P+ CY C GH+S DC
Sbjct: 159 -PLSSAGKVCYKCSLAGHISRDC 180
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 26/122 (21%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADA---------------RGDKVG----IVCYKCNN 44
T+ +CY C GH +CP A RG G +CYKC
Sbjct: 65 TTGGRCYICHLPGHLARTCPSAGMHGAGRGAPVIRGGFNSAFRGGFAGYSRTAMCYKCGG 124
Query: 45 YGHFARECATESVTCYNCSGQGHVAKDCTVK-------SSIICYNCNSSGHFARNCPNDS 97
HFAR+C +++ CY C GH+++DC + +CY C+ +GH +R+CP ++
Sbjct: 125 PNHFARDCQAQAMKCYACGKLGHISRDCPAPNGGPLSSAGKVCYKCSLAGHISRDCPTNT 184
Query: 98 SK 99
++
Sbjct: 185 NE 186
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 47/133 (35%), Gaps = 29/133 (21%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN-- 95
CYKC N GH+A + + D + + + GH +CP
Sbjct: 7 ACYKCGNIGHYADSARSARLR------NAFAITDMSRMVARVLAQQKGLGHVQADCPTLR 60
Query: 96 ----DSSKRCYACHQAGHMAKECP--GQTAGKSPEPVV---------------DMSLTCY 134
+ RCY CH GH+A+ CP G PV+ + CY
Sbjct: 61 ISGGTTGGRCYICHLPGHLARTCPSAGMHGAGRGAPVIRGGFNSAFRGGFAGYSRTAMCY 120
Query: 135 VCGHQGHLSYDCK 147
CG H + DC+
Sbjct: 121 KCGGPNHFARDCQ 133
>gi|308485264|ref|XP_003104831.1| CRE-GLH-4 protein [Caenorhabditis remanei]
gi|308257529|gb|EFP01482.1| CRE-GLH-4 protein [Caenorhabditis remanei]
Length = 1164
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 13/112 (11%)
Query: 41 KCNNYGHFAR-ECATESVTCYNCSGQGHVAKDCTV--KSSIICYNCNSSGHFARNCPNDS 97
K +G+ +R E A C+NC +GH ++DC + C NCN GHFA++CP
Sbjct: 572 KGGGWGNESRHEDAERPRGCHNCGEEGHFSRDCDKPKQPRFPCRNCNVVGHFAKDCPEPR 631
Query: 98 SKR--CYACHQAGHMAKECPGQTAGKSP-EPVVDMSLTCYVCGHQGHLSYDC 146
C C + GH +K+C + P EP C C +GH S +C
Sbjct: 632 VPYGPCRNCQEEGHFSKDCTKERVRTEPTEP-------CRRCNEEGHWSSEC 676
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 39 CYKCNNYGHFAREC---ATESVTCYNCSGQGHVAKDCTVKSSII--CYNCNSSGHFARNC 93
C+ C GHF+R+C C NC+ GH AKDC C NC GHF+++C
Sbjct: 591 CHNCGEEGHFSRDCDKPKQPRFPCRNCNVVGHFAKDCPEPRVPYGPCRNCQEEGHFSKDC 650
Query: 94 P-----NDSSKRCYACHQAGHMAKECPGQ 117
+ ++ C C++ GH + ECP +
Sbjct: 651 TKERVRTEPTEPCRRCNEEGHWSSECPSR 679
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 15/95 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSGQ 65
C+NC + GH+ C + C CN GHFA++C V C NC +
Sbjct: 591 CHNCGEEGHFSRDCDKPKQPR-------FPCRNCNVVGHFAKDCPEPRVPYGPCRNCQEE 643
Query: 66 GHVAKDCT-----VKSSIICYNCNSSGHFARNCPN 95
GH +KDCT + + C CN GH++ CP+
Sbjct: 644 GHFSKDCTKERVRTEPTEPCRRCNEEGHWSSECPS 678
>gi|57648427|gb|AAW55908.1| zinc finger protein 7 [Trypanosoma cruzi]
Length = 101
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 49/110 (44%), Gaps = 19/110 (17%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH CP + A GD+ CY C GH +REC + +G
Sbjct: 6 CYNCGRMGHLSRECPTRPPG-AMGDRA---CYNCGRMGHLSRECPNRPAGGFRGVARG-- 59
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPN---DSSKRCYACHQAGHMAKECP 115
CY+C GH AR+CPN + CY C Q GH+++ CP
Sbjct: 60 ----------ACYHCQQEGHLARDCPNAPPGGERACYNCGQTGHISRACP 99
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 47/104 (45%), Gaps = 21/104 (20%)
Query: 58 TCYNCSGQGHVAKDCTVKSS-----IICYNCNSSGHFARNCPNDSSK--------RCYAC 104
CYNC GH++++C + CYNC GH +R CPN + CY C
Sbjct: 5 ACYNCGRMGHLSRECPTRPPGAMGDRACYNCGRMGHLSRECPNRPAGGFRGVARGACYHC 64
Query: 105 HQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
Q GH+A++CP G CY CG GH+S C +
Sbjct: 65 QQEGHLARDCPNAPPGG--------ERACYNCGQTGHISRACPV 100
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----TCYNCSG 64
CYNC GH CP + + RG G CY C GH AR+C CYNC
Sbjct: 32 CYNCGRMGHLSRECPNRPAGGFRGVARG-ACYHCQQEGHLARDCPNAPPGGERACYNCGQ 90
Query: 65 QGHVAKDCTVK 75
GH+++ C VK
Sbjct: 91 TGHISRACPVK 101
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 97 SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY C + GH+++ECP + G + CY CG GHLS +C
Sbjct: 2 GDRACYNCGRMGHLSRECPTRPPGAMGD------RACYNCGRMGHLSREC 45
>gi|226246544|ref|NP_001139665.1| vasa protein [Strongylocentrotus purpuratus]
gi|223056284|gb|ACM80369.1| vasa [Strongylocentrotus purpuratus]
Length = 766
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 48/106 (45%), Gaps = 29/106 (27%)
Query: 39 CYKCNNYGHFARECATESVT----------CYNCSGQGHVAKDCTVKSSII--------- 79
CYKC GH AR+C + CYNC GH++++C K S
Sbjct: 146 CYKCQEEGHMARDCPNGDSSGGGRGGGDRSCYNCGETGHMSRECPTKDSSGGGRGGGGGD 205
Query: 80 --CYNCNSSGHFARNCPNDSS--------KRCYACHQAGHMAKECP 115
CYNC +GH +R CP S +C+ C + GH AKECP
Sbjct: 206 RSCYNCGETGHMSRECPTKDSSGGGGGGGGKCFRCQEEGHFAKECP 251
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 61/152 (40%), Gaps = 27/152 (17%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---------- 58
CY C + GH CP S+ CY C GH +REC T+ +
Sbjct: 146 CYKCQEEGHMARDCPNGDSSGGGRGGGDRSCYNCGETGHMSRECPTKDSSGGGRGGGGGD 205
Query: 59 --CYNCSGQGHVAKDCTVKSS--------IICYNCNSSGHFARNCPNDSSKRCYACHQAG 108
CYNC GH++++C K S C+ C GHFA+ CPN ++ G
Sbjct: 206 RSCYNCGETGHMSRECPTKDSSGGGGGGGGKCFRCQEEGHFAKECPNPDTR------NEG 259
Query: 109 HMAKECPGQTAGKSPEPVVDMSLTCYVCGHQG 140
+ P + P+P + S Y+ QG
Sbjct: 260 EGGEAKPPASTYVPPDPSEEES-QIYISTEQG 290
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 23/108 (21%)
Query: 59 CYNCSGQGHVAKDC---------TVKSSIICYNCNSSGHFARNCPNDSSKR--------- 100
CY C +GH+A+DC CYNC +GH +R CP S
Sbjct: 146 CYKCQEEGHMARDCPNGDSSGGGRGGGDRSCYNCGETGHMSRECPTKDSSGGGRGGGGGD 205
Query: 101 --CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C + GHM++ECP + S C+ C +GH + +C
Sbjct: 206 RSCYNCGETGHMSRECPTK---DSSGGGGGGGGKCFRCQEEGHFAKEC 250
>gi|154279524|ref|XP_001540575.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412518|gb|EDN07905.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 221
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 15 FGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-----------TCYNCS 63
GH Q CP + G G CY C+ GH AR C + + +N +
Sbjct: 53 LGHVQADCP---TLRISGGATGGRCYICHLPGHLARTCPSAGMHGAGRGAPVIRGGFNSA 109
Query: 64 GQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
+G A + +CY C HFAR+C + K CYAC + GH++++CP G
Sbjct: 110 FRGGFAG---YSRTAMCYKCGGPNHFARDCQAQAMK-CYACGKLGHISRDCPAPNGG--- 162
Query: 124 EPVVDMSLTCYVCGHQGHLSYDC 146
P+ CY C GH+S DC
Sbjct: 163 -PLSSAGKVCYKCSLAGHISRDC 184
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 26/118 (22%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADA---------------RGDKVG----IVCYKCNNYGHF 48
+CY C GH +CP A RG G +CYKC HF
Sbjct: 73 RCYICHLPGHLARTCPSAGMHGAGRGAPVIRGGFNSAFRGGFAGYSRTAMCYKCGGPNHF 132
Query: 49 ARECATESVTCYNCSGQGHVAKDCTVK-------SSIICYNCNSSGHFARNCPNDSSK 99
AR+C +++ CY C GH+++DC + +CY C+ +GH +R+CP ++++
Sbjct: 133 ARDCQAQAMKCYACGKLGHISRDCPAPNGGPLSSAGKVCYKCSLAGHISRDCPTNTNE 190
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 49/133 (36%), Gaps = 25/133 (18%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN-- 95
CYKC N GH+A + S N +D + + + GH +CP
Sbjct: 7 ACYKCGNIGHYAD--SARSARLRNAFAITANNRDMSRMVARVLAQQKGLGHVQADCPTLR 64
Query: 96 ----DSSKRCYACHQAGHMAKECP--GQTAGKSPEPVV---------------DMSLTCY 134
+ RCY CH GH+A+ CP G PV+ + CY
Sbjct: 65 ISGGATGGRCYICHLPGHLARTCPSAGMHGAGRGAPVIRGGFNSAFRGGFAGYSRTAMCY 124
Query: 135 VCGHQGHLSYDCK 147
CG H + DC+
Sbjct: 125 KCGGPNHFARDCQ 137
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES 56
++CY C GH CP + G VCYKC+ GH +R+C T +
Sbjct: 140 AMKCYACGKLGHISRDCPAPNGGPL--SSAGKVCYKCSLAGHISRDCPTNT 188
>gi|260408201|gb|ACX37415.1| vasa [Botryllus schlosseri]
Length = 655
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 55/126 (43%), Gaps = 32/126 (25%)
Query: 25 KSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCN 84
KS +++R C+KC GH +REC G G K C + C
Sbjct: 45 KSGSNSRA------CFKCGQEGHMSRECPE--------GGGGSRPKGC--------FKCG 82
Query: 85 SSGHFARNCP----NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQG 140
GH +R CP + K C+ C + GHM++ECP G S C+ CG +G
Sbjct: 83 EEGHMSRECPSGGGDSRPKGCFKCGEEGHMSRECPTGGGGDSRPK------GCFKCGEEG 136
Query: 141 HLSYDC 146
H+S +C
Sbjct: 137 HMSREC 142
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 15/104 (14%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-----ES 56
S +++ C+ C GH CP+ G C+KC GH +REC +
Sbjct: 46 SGSNSRACFKCGQEGHMSRECPEGG-----GGSRPKGCFKCGEEGHMSRECPSGGGDSRP 100
Query: 57 VTCYNCSGQGHVAKDCTV-----KSSIICYNCNSSGHFARNCPN 95
C+ C +GH++++C C+ C GH +R CPN
Sbjct: 101 KGCFKCGEEGHMSRECPTGGGGDSRPKGCFKCGEEGHMSRECPN 144
>gi|449671299|ref|XP_002162674.2| PREDICTED: uncharacterized protein LOC100212542 [Hydra
magnipapillata]
Length = 512
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 14/92 (15%)
Query: 38 VCYKCNNYGHFARECATESVT-------CYNCSGQGHVAKDC----TVKSSIICYNCNSS 86
C +CN GHFA++C + C+ C G+GH A++C T S C+ C
Sbjct: 132 ACRRCNEEGHFAKDCTQAPASNGGNKGACHKCGGEGHFARECPNTETAPRSGACHKCGEE 191
Query: 87 GHFARNCPNDSSK---RCYACHQAGHMAKECP 115
GHFAR CP C C++ GH A+ECP
Sbjct: 192 GHFARQCPKSGPPGGGACRKCNEVGHFARECP 223
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-----ATESVT 58
TS C C + GH+ C Q +++ G+K C+KC GHFAREC A S
Sbjct: 128 TSKGACRRCNEEGHFAKDCTQAPASNG-GNKG--ACHKCGGEGHFARECPNTETAPRSGA 184
Query: 59 CYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
C+ C +GH A+ C C CN GHFAR CP
Sbjct: 185 CHKCGEEGHFARQCPKSGPPGGGACRKCNEVGHFARECP 223
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 50/107 (46%), Gaps = 18/107 (16%)
Query: 54 TESVTCYNCSGQGHVAKDCTVKSSI------ICYNCNSSGHFARNCPN-DSSKRCYACH- 105
T C C+ +GH AKDCT + C+ C GHFAR CPN +++ R ACH
Sbjct: 128 TSKGACRRCNEEGHFAKDCTQAPASNGGNKGACHKCGGEGHFARECPNTETAPRSGACHK 187
Query: 106 --QAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
+ GH A++CP KS P C C GH + +C Q
Sbjct: 188 CGEEGHFARQCP-----KSGPP---GGGACRKCNEVGHFARECPQNQ 226
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
C+ C + GH+ CP+ G G C KCN GHFAREC + SG G
Sbjct: 185 CHKCGEEGHFARQCPKS------GPPGGGACRKCNEVGHFARECPQNQNGTDSSSGFG 236
>gi|156065913|ref|XP_001598878.1| hypothetical protein SS1G_00967 [Sclerotinia sclerotiorum 1980]
gi|154691826|gb|EDN91564.1| hypothetical protein SS1G_00967 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 394
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 76/202 (37%), Gaps = 68/202 (33%)
Query: 1 MSSTSTIQCYNCFDFGHYQY-----------------SCPQKSSADARGDKVGIVCYKCN 43
MSS S CY C + GHY CP + +A+ CY C
Sbjct: 173 MSSLSRRACYKCGNVGHYAEVCASAERLCYNLGHESNGCPLPRTTEAK------QCYHCQ 226
Query: 44 NYGHFARECATESVT-------CYNCSGQGHVAKDCTVKSSII----------------- 79
GH +C T ++ CYNC GH+A+ C ++ +
Sbjct: 227 GLGHVQADCPTLRISGAGTTGRCYNCGMPGHLARACPNPNNGMPGAPRGLGAPRGGFGGG 286
Query: 80 ---------------CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPE 124
CY C HFAR+C S+ +CYAC + GH +++C G
Sbjct: 287 FAPRGGFAGGPRPATCYKCGGPNHFARDC-QASAVKCYACGKIGHTSRDCSSPNGG---- 341
Query: 125 PVVDMSLTCYVCGHQGHLSYDC 146
V CY CG +GH++ DC
Sbjct: 342 -VNKAGKICYTCGTEGHVARDC 362
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 52/120 (43%), Gaps = 29/120 (24%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADA-----------------------RGDKVGIVCYK 41
+T +CYNC GH +CP ++ G CYK
Sbjct: 245 TTGRCYNCGMPGHLARACPNPNNGMPGAPRGLGAPRGGFGGGFAPRGGFAGGPRPATCYK 304
Query: 42 CNNYGHFARECATESVTCYNCSGQGHVAKDCTV------KSSIICYNCNSSGHFARNCPN 95
C HFAR+C +V CY C GH ++DC+ K+ ICY C + GH AR+CP+
Sbjct: 305 CGGPNHFARDCQASAVKCYACGKIGHTSRDCSSPNGGVNKAGKICYTCGTEGHVARDCPS 364
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSG 64
S ++CY C GH C SS + +K G +CY C GH AR+C ++ + N G
Sbjct: 318 SAVKCYACGKIGHTSRDC---SSPNGGVNKAGKICYTCGTEGHVARDCPSKGL---NVDG 371
Query: 65 QG 66
+G
Sbjct: 372 EG 373
>gi|159125542|gb|EDP50659.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
fumigatus A1163]
Length = 509
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 18/125 (14%)
Query: 7 IQCYNCFDFGHYQYSC--------PQKSSADARGDK--VGIVCYKCNNYGHFAREC--AT 54
++C NC GH C P+ +AD + G+ C +CN GHFA++C A
Sbjct: 312 VKCVNCNASGHRARDCTEPRVDRSPEHKAADCPNPRSAEGVECKRCNEMGHFAKDCHQAP 371
Query: 55 ESVTCYNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCP--NDSSK-RCYACHQAG 108
TC NC + H+A+DC S + C NC GHF+R+CP D SK +C C ++
Sbjct: 372 APRTCRNCGSEDHMARDCDKPRDASIVTCRNCEEVGHFSRDCPQKKDWSKVKCNNCGESE 431
Query: 109 HMAKE 113
AK+
Sbjct: 432 QSAKD 436
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 60/132 (45%), Gaps = 27/132 (20%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--------------- 52
+C NC + GH C ++ A D+V + C CN GH AR+C
Sbjct: 286 KCGNCGEMGHTARGCKEER---ALVDRVEVKCVNCNASGHRARDCTEPRVDRSPEHKAAD 342
Query: 53 -----ATESVTCYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNC--PNDSS-KRCYA 103
+ E V C C+ GH AKDC + C NC S H AR+C P D+S C
Sbjct: 343 CPNPRSAEGVECKRCNEMGHFAKDCHQAPAPRTCRNCGSEDHMARDCDKPRDASIVTCRN 402
Query: 104 CHQAGHMAKECP 115
C + GH +++CP
Sbjct: 403 CEEVGHFSRDCP 414
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 54/124 (43%), Gaps = 25/124 (20%)
Query: 33 DKVGIVCYKCNNYGHFARECATE-------SVTCYNCSGQGHVAKDCTVKSSIICYNCNS 85
DK C C GH AR C E V C NC+ GH A+DCT S
Sbjct: 281 DKQIPKCGNCGEMGHTARGCKEERALVDRVEVKCVNCNASGHRARDCTEPRVD-----RS 335
Query: 86 SGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHL 142
H A +CPN S C C++ GH AK+C ++P P TC CG + H+
Sbjct: 336 PEHKAADCPNPRSAEGVECKRCNEMGHFAKDC-----HQAPAP-----RTCRNCGSEDHM 385
Query: 143 SYDC 146
+ DC
Sbjct: 386 ARDC 389
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 36 GIVCYKCNNYGHFARECAT--ESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFA 90
G C C GHFAREC + + C+NC +G +CT K + C C+ GH A
Sbjct: 70 GNKCRNCGGDGHFARECPAPRKGMACFNCGEEGRSKAECT-KPRVFKGPCRICSKEGHPA 128
Query: 91 RNCPNDSSKRCYACHQAGHMAKEC 114
CP+ C C GH EC
Sbjct: 129 AECPDRPPDVCKNCQSEGHKTIEC 152
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 11/84 (13%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC GH+ CP + G+ C+ C G EC V C CS
Sbjct: 72 KCRNCGGDGHFARECP--------APRKGMACFNCGEEGRSKAECTKPRVFKGPCRICSK 123
Query: 65 QGHVAKDCTVKSSIICYNCNSSGH 88
+GH A +C + +C NC S GH
Sbjct: 124 EGHPAAECPDRPPDVCKNCQSEGH 147
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 14/96 (14%)
Query: 59 CYNCSGQGHVAKDCTV-KSSIICYNCNSSGHFARNC--PNDSSKRCYACHQAGHMAKECP 115
C NC G GH A++C + + C+NC G C P C C + GH A ECP
Sbjct: 73 CRNCGGDGHFARECPAPRKGMACFNCGEEGRSKAECTKPRVFKGPCRICSKEGHPAAECP 132
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
+ P V C C +GH + +C +K
Sbjct: 133 DRP------PDV-----CKNCQSEGHKTIECTENRK 157
>gi|70993356|ref|XP_751525.1| zinc knuckle transcription factor (CnjB) [Aspergillus fumigatus
Af293]
gi|66849159|gb|EAL89487.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
fumigatus Af293]
Length = 509
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 18/125 (14%)
Query: 7 IQCYNCFDFGHYQYSC--------PQKSSADARGDK--VGIVCYKCNNYGHFAREC--AT 54
++C NC GH C P+ +AD + G+ C +CN GHFA++C A
Sbjct: 312 VKCVNCNASGHRARDCTEPRVDRSPEHKAADCPNPRSAEGVECKRCNEMGHFAKDCHQAP 371
Query: 55 ESVTCYNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCP--NDSSK-RCYACHQAG 108
TC NC + H+A+DC S + C NC GHF+R+CP D SK +C C ++
Sbjct: 372 APRTCRNCGSEDHMARDCDKPRDASIVTCRNCEEVGHFSRDCPQKKDWSKVKCNNCGESE 431
Query: 109 HMAKE 113
AK+
Sbjct: 432 QSAKD 436
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 60/132 (45%), Gaps = 27/132 (20%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--------------- 52
+C NC + GH C ++ A D+V + C CN GH AR+C
Sbjct: 286 KCGNCGEMGHTARGCKEER---ALVDRVEVKCVNCNASGHRARDCTEPRVDRSPEHKAAD 342
Query: 53 -----ATESVTCYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNC--PNDSS-KRCYA 103
+ E V C C+ GH AKDC + C NC S H AR+C P D+S C
Sbjct: 343 CPNPRSAEGVECKRCNEMGHFAKDCHQAPAPRTCRNCGSEDHMARDCDKPRDASIVTCRN 402
Query: 104 CHQAGHMAKECP 115
C + GH +++CP
Sbjct: 403 CEEVGHFSRDCP 414
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 54/124 (43%), Gaps = 25/124 (20%)
Query: 33 DKVGIVCYKCNNYGHFARECATE-------SVTCYNCSGQGHVAKDCTVKSSIICYNCNS 85
DK C C GH AR C E V C NC+ GH A+DCT S
Sbjct: 281 DKQIPKCGNCGEMGHTARGCKEERALVDRVEVKCVNCNASGHRARDCTEPRVD-----RS 335
Query: 86 SGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHL 142
H A +CPN S C C++ GH AK+C ++P P TC CG + H+
Sbjct: 336 PEHKAADCPNPRSAEGVECKRCNEMGHFAKDC-----HQAPAP-----RTCRNCGSEDHM 385
Query: 143 SYDC 146
+ DC
Sbjct: 386 ARDC 389
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 39 CYKCNNYGHFARECAT--ESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNC 93
C C GHFAREC + + C+NC +G +CT K + C C+ GH A C
Sbjct: 73 CRNCGGDGHFARECPAPRKGMACFNCGEEGRSKAECT-KPRVFKGPCRICSKEGHPAAEC 131
Query: 94 PNDSSKRCYACHQAGHMAKEC 114
P+ C C GH EC
Sbjct: 132 PDRPPDVCKNCQSEGHKTIEC 152
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 11/84 (13%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC GH+ CP + G+ C+ C G EC V C CS
Sbjct: 72 KCRNCGGDGHFARECP--------APRKGMACFNCGEEGRSKAECTKPRVFKGPCRICSK 123
Query: 65 QGHVAKDCTVKSSIICYNCNSSGH 88
+GH A +C + +C NC S GH
Sbjct: 124 EGHPAAECPDRPPDVCKNCQSEGH 147
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 14/96 (14%)
Query: 59 CYNCSGQGHVAKDCTV-KSSIICYNCNSSGHFARNC--PNDSSKRCYACHQAGHMAKECP 115
C NC G GH A++C + + C+NC G C P C C + GH A ECP
Sbjct: 73 CRNCGGDGHFARECPAPRKGMACFNCGEEGRSKAECTKPRVFKGPCRICSKEGHPAAECP 132
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
+ P V C C +GH + +C +K
Sbjct: 133 DRP------PDV-----CKNCQSEGHKTIECTENRK 157
>gi|413955598|gb|AFW88247.1| hypothetical protein ZEAMMB73_261646 [Zea mays]
gi|413955599|gb|AFW88248.1| hypothetical protein ZEAMMB73_261646 [Zea mays]
Length = 174
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 60/134 (44%), Gaps = 29/134 (21%)
Query: 38 VCYKCNNYGHFARECAT------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFAR 91
+C C GH AR+C E + C NC GH ++CT + + C NC SGH AR
Sbjct: 10 ICRNCGKSGHIARDCTAPPVPPGEVILCSNCYKPGHFREECTNEKA--CNNCRQSGHIAR 67
Query: 92 NCPNDSSKRCYACHQAGHMAKECP-----GQTAGKSP-----EPVVDMS---------LT 132
NC ND C C+ AGH+A++CP G+ G P P + +
Sbjct: 68 NCTNDPV--CNLCNVAGHLARQCPKSDTLGERGGPPPFHGVGAPFRGVGVPFRGGLSDVI 125
Query: 133 CYVCGHQGHLSYDC 146
C C GH S DC
Sbjct: 126 CRACNQIGHASRDC 139
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 48 FARECATESVTCYNCSGQGHVAKDCTVK-----SSIICYNCNSSGHFARNCPNDSSKRCY 102
A C E + C NC GH+A+DCT I+C NC GHF C N+ K C
Sbjct: 1 MANSCPNEGI-CRNCGKSGHIARDCTAPPVPPGEVILCSNCYKPGHFREECTNE--KACN 57
Query: 103 ACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
C Q+GH+A+ C + +PV C +C GHL+ C
Sbjct: 58 NCRQSGHIARNC-------TNDPV------CNLCNVAGHLARQCP 89
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 53/145 (36%), Gaps = 42/145 (28%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
+ I C NC+ GH++ C + + C C GH AR C + V C
Sbjct: 29 VPPGEVILCSNCYKPGHFREECTNEKA-----------CNNCRQSGHIARNCTNDPV-CN 76
Query: 61 NCSGQGHVAKDCTVK------------------------------SSIICYNCNSSGHFA 90
C+ GH+A+ C S +IC CN GH +
Sbjct: 77 LCNVAGHLARQCPKSDTLGERGGPPPFHGVGAPFRGVGVPFRGGLSDVICRACNQIGHAS 136
Query: 91 RNCPNDSSKRCYACHQAGHMAKECP 115
R+C + C+ C GH A ECP
Sbjct: 137 RDCMAGAFMICHNCGGRGHTAYECP 161
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSSI 78
RG ++C CN GH +R+C A + C+NC G+GH A +C S I
Sbjct: 118 RGGLSDVICRACNQIGHASRDCMAGAFMICHNCGGRGHTAYECPSVSLI 166
>gi|396480818|ref|XP_003841090.1| similar to cellular nucleic acid-binding protein [Leptosphaeria
maculans JN3]
gi|312217664|emb|CBX97611.1| similar to cellular nucleic acid-binding protein [Leptosphaeria
maculans JN3]
Length = 308
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Query: 32 GDKVGIVCYKCNNYGHFARECATES--VTCYNCSGQGHVAKDCTVKSSII--------CY 81
G G+VCY C + GH REC +S TC+NC G GH DC + C+
Sbjct: 143 GGFAGMVCYGCGDTGHAKRECPKKSGVETCHNCGGTGHRKIDCDQPRKPMAGGHGGRTCH 202
Query: 82 NCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
NC S H R CP RC C + GH+A++C
Sbjct: 203 NCGSEDHMLRECPEPRVMRCQNCAEEGHVARDC 235
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 53/120 (44%), Gaps = 20/120 (16%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE---------SV 57
+ CY C D GH + CP+KS + C+ C GH +C
Sbjct: 148 MVCYGCGDTGHAKRECPKKSGVE--------TCHNCGGTGHRKIDCDQPRKPMAGGHGGR 199
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC--PNDSSK-RCYACHQAGHMAKEC 114
TC+NC + H+ ++C + C NC GH AR+C P D SK +C C + GH C
Sbjct: 200 TCHNCGSEDHMLRECPEPRVMRCQNCAEEGHVARDCSLPRDWSKFKCRNCEEYGHSQAHC 259
>gi|328869417|gb|EGG17795.1| hypothetical protein DFA_08795 [Dictyostelium fasciculatum]
Length = 521
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 52/97 (53%), Gaps = 11/97 (11%)
Query: 56 SVTCYNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAK 112
S+ CY C G+GH CT K + +C++C+ GH NCP S +CY C Q GH K
Sbjct: 284 SIVCYKCGGEGHQQIACTSKYPSTGGVCHSCSGRGHIQYNCP---SAKCYRCGQNGHQQK 340
Query: 113 ECP-GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
C G + G P+ V CY CG +GHL+ DC +
Sbjct: 341 YCTYGPSEGGKPKNV----FPCYACGKEGHLAKDCDV 373
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 63/152 (41%), Gaps = 37/152 (24%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSG 64
S+I CY C GH Q +C K + G VC+ C+ GH C S CY C
Sbjct: 283 SSIVCYKCGGEGHQQIACTSKYPS------TGGVCHSCSGRGHIQYNCP--SAKCYRCGQ 334
Query: 65 QGHVAKDCTV--------KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
GH K CT K+ CY C GH A++C C+ C Q GH +K+C
Sbjct: 335 NGHQQKYCTYGPSEGGKPKNVFPCYACGKEGHLAKDC-----DVCFTCKQPGHKSKDCD- 388
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
C+ C +GH + +C+L
Sbjct: 389 ---------------VCHTCKERGHRAKECQL 405
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 15/110 (13%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQ 65
+ +CY C GH Q C S + V CY C GH A++C C+ C
Sbjct: 326 SAKCYRCGQNGHQQKYCTYGPSEGGKPKNV-FPCYACGKEGHLAKDCDV----CFTCKQP 380
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
GH +KDC V C+ C GH A+ C + C+ C + GH + ECP
Sbjct: 381 GHKSKDCDV-----CHTCKERGHRAKEC-----QLCFECRKVGHKSWECP 420
>gi|71756201|ref|XP_829015.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70834401|gb|EAN79903.1| nucleic acid binding protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261334955|emb|CBH17949.1| nucleic acid binding protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 516
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 36/137 (26%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQ 65
+++C+ C GH CPQ CY C NYGH ++ C + + CY+CS
Sbjct: 83 SMECFQCHQKGHLLPMCPQTR------------CYNCGNYGHSSQRCLSRPL-CYHCSST 129
Query: 66 GHVAKDCTVKS--------------------SIICYNCNSSGHFARNCPNDSSKRCYACH 105
GH + DC ++ S +C+ CN GH + CP S RC A
Sbjct: 130 GHRSTDCPLREKGRVCYRCKKPGHDMAGCSLSALCFTCNGEGHMSAQCPQISCNRCNA-- 187
Query: 106 QAGHMAKECPGQTAGKS 122
GH+A +CP + +S
Sbjct: 188 -KGHVAAQCPQASGNRS 203
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C +C H + SCP + + + C++C+ GH C CYNC GH
Sbjct: 64 CRSCGSSRHAEASCPLRMKS--------MECFQCHQKGHLLPMCP--QTRCYNCGNYGHS 113
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCP-NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVV 127
++ C S +CY+C+S+GH + +CP + + CY C + GH C
Sbjct: 114 SQRCL--SRPLCYHCSSTGHRSTDCPLREKGRVCYRCKKPGHDMAGC------------- 158
Query: 128 DMSLTCYVCGHQGHLSYDCKLV 149
+S C+ C +GH+S C +
Sbjct: 159 SLSALCFTCNGEGHMSAQCPQI 180
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 20/151 (13%)
Query: 3 STSTIQCYNCFDFGHYQYSC---PQKSSADARGDKVGIVCYKCNNYGHFARECA--TESV 57
+ S ++C C + GH + +C ++ + + + VC C + H C +S+
Sbjct: 25 ANSLVRCSICGNVGHDKVACLSARKRPRTEEEEEALPSVCRSCGSSRHAEASCPLRMKSM 84
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
C+ C +GH+ C CYNC + GH ++ C S CY C GH + +CP +
Sbjct: 85 ECFQCHQKGHLLPMC---PQTRCYNCGNYGHSSQRCL--SRPLCYHCSSTGHRSTDCPLR 139
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
G+ CY C GH C L
Sbjct: 140 EKGR----------VCYRCKKPGHDMAGCSL 160
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 53/123 (43%), Gaps = 18/123 (14%)
Query: 37 IVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP-N 95
+ C C N GH + V C + + ++ S+ C +C SS H +CP
Sbjct: 29 VRCSICGNVGH-------DKVACLSARKRPRTEEEEEALPSV-CRSCGSSRHAEASCPLR 80
Query: 96 DSSKRCYACHQAGHMAKECPGQTA-------GKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
S C+ CHQ GH+ CP QT G S + + L CY C GH S DC L
Sbjct: 81 MKSMECFQCHQKGHLLPMCP-QTRCYNCGNYGHSSQRCLSRPL-CYHCSSTGHRSTDCPL 138
Query: 149 VQK 151
+K
Sbjct: 139 REK 141
>gi|403169101|ref|XP_003328636.2| hypothetical protein PGTG_10595 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167802|gb|EFP84217.2| hypothetical protein PGTG_10595 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 227
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 59/143 (41%), Gaps = 30/143 (20%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSS-----IICYNCNSSGHFARN 92
C+KC GH A +C ES CYNC GH + C + C+ C GH A +
Sbjct: 8 ACFKCGALGHLAEQCPAESRLCYNCKQSGHESASCPNPRTGGVDGRQCFTCGGFGHLAAD 67
Query: 93 CPNDSS-------------KRCYACHQAGHMAKEC------PGQTA------GKSPEPVV 127
CP+ ++ +CY C Q GH+++ C GQ A G P P
Sbjct: 68 CPSATTLGNRIAGVGSFGGTKCYTCGQFGHVSRSCNHSGNGVGQGAFQSRIGGYKPRPAP 127
Query: 128 DMSLTCYVCGHQGHLSYDCKLVQ 150
+ CY C H + DC +Q
Sbjct: 128 SQPVQCYKCQGMNHYARDCMAIQ 150
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 47/132 (35%), Gaps = 39/132 (29%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADAR----GDKVGIVCYKCNNYGHFAREC----------- 52
QC+ C FGH CP ++ R G G CY C +GH +R C
Sbjct: 54 QCFTCGGFGHLAADCPSATTLGNRIAGVGSFGGTKCYTCGQFGHVSRSCNHSGNGVGQGA 113
Query: 53 -------------ATESVTCYNCSGQGHVAKDCTV-----------KSSIICYNCNSSGH 88
++ V CY C G H A+DC + C+NC H
Sbjct: 114 FQSRIGGYKPRPAPSQPVQCYKCQGMNHYARDCMAIQPPPALQPRYLKTRTCFNCQQPEH 173
Query: 89 FARNCPNDSSKR 100
A NCP + R
Sbjct: 174 IASNCPGSGADR 185
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 22/155 (14%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---------- 58
CYNC GH SCP + G + C+ C +GH A +C + +
Sbjct: 29 CYNCKQSGHESASCPNPRTGGVDGRQ----CFTCGGFGHLAADCPSATTLGNRIAGVGSF 84
Query: 59 ----CYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCPNDSSKRCYACHQAGHMA 111
CY C GHV++ C + + + G+ R P+ + CY C H A
Sbjct: 85 GGTKCYTCGQFGHVSRSCNHSGNGVGQGAFQSRIGGYKPRPAPSQPVQ-CYKCQGMNHYA 143
Query: 112 KECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++C + +P + TC+ C H++ +C
Sbjct: 144 RDCMAIQPPPALQPRYLKTRTCFNCQQPEHIASNC 178
>gi|189197575|ref|XP_001935125.1| cellular nucleic acid-binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187981073|gb|EDU47699.1| cellular nucleic acid-binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 285
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT--------CY 60
C+NC + GH + C D+V C+ CN GH +C TE+ T C+
Sbjct: 138 CFNCGELGHRKSDCTAPRKLMGGSDRV---CFNCNLPGHNKSDC-TEAPTGGGGGGRACH 193
Query: 61 NCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC--PNDSSK-RCYACHQAGHMAKECP 115
NC +GH++++C + C NC++ GH +R C P D S+ +C C + GH K CP
Sbjct: 194 NCGEEGHISRECDKPRVMKCRNCDAEGHHSRECDKPRDWSRVKCRNCDEFGHGEKRCP 251
>gi|225559017|gb|EEH07300.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 465
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 67/143 (46%), Gaps = 18/143 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC GH +CP + S KV + C CN GH AR+C + + +C NC
Sbjct: 256 KCVNCGQMGHGSRACPDERSVVE---KVEVKCVNCNGMGHRARDCTEKRIDKFSCRNCGQ 312
Query: 65 QGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAGKSP 123
GH + DCT S GHFA++CP R C C + GH++KEC
Sbjct: 313 PGHRSSDCTEPRSAEGV---EFGHFAKDCPQGGGSRACRNCGEEGHISKEC--------D 361
Query: 124 EPVVDMSLTCYVCGHQGHLSYDC 146
+P ++TC C GH S DC
Sbjct: 362 KPRNLDTVTCRNCEEVGHYSRDC 384
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 20/122 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE--SVTCYNCSGQG 66
C NC GH C + SA+ G+ +GHFA++C S C NC +G
Sbjct: 307 CRNCGQPGHRSSDCTEPRSAE------GV------EFGHFAKDCPQGGGSRACRNCGEEG 354
Query: 67 HVAKDCTVK---SSIICYNCNSSGHFARNC--PNDSSK-RCYACHQAGHMAKECPGQTAG 120
H++K+C ++ C NC GH++R+C D +K +C C + GH + CP G
Sbjct: 355 HISKECDKPRNLDTVTCRNCEEVGHYSRDCTKKKDWTKVQCNNCKEMGHTVRRCPKPVEG 414
Query: 121 KS 122
++
Sbjct: 415 EN 416
>gi|297836502|ref|XP_002886133.1| hypothetical protein ARALYDRAFT_480687 [Arabidopsis lyrata subsp.
lyrata]
gi|297331973|gb|EFH62392.1| hypothetical protein ARALYDRAFT_480687 [Arabidopsis lyrata subsp.
lyrata]
Length = 299
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 71/169 (42%), Gaps = 28/169 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--------------AT 54
CY C D GH+ C Q ++ G G CY C GH A++C +
Sbjct: 130 CYVCGDVGHFARDCRQSGGGNSGGGGGGGPCYSCGEVGHLAKDCRGGSGGNRYGGGGRGS 189
Query: 55 ESVTCYNCSGQGHVAKDC----------TVKSSIICYNCNSSGHFARNCPND--SSKRCY 102
S CY C G GH A+DC CY C GH AR C + S CY
Sbjct: 190 GSDGCYLCGGVGHFARDCRQNGGGNVGGGGGGGNTCYTCGGVGHIARVCTSKRPSGGACY 249
Query: 103 ACHQAGHMAKECPGQTAGKSPEPVVDMSLT--CYVCGHQGHLSYDCKLV 149
C + GH+A++C + +G S + C+ CG +GH + +C V
Sbjct: 250 ECGETGHLARDCDRRGSGSSGGGGGGGGGSGKCFNCGKEGHFARECSSV 298
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 63/177 (35%), Gaps = 48/177 (27%)
Query: 9 CYNCFDFGHYQYSCP------QKSSADARGDKVGIVCYKCNNYGHFAREC---------- 52
C+NC + GH C R CY C + GHFAR+C
Sbjct: 94 CFNCGEVGHMAKDCDGGGGGRSYGGGGGRRSGGEGTCYVCGDVGHFARDCRQSGGGNSGG 153
Query: 53 ATESVTCYNCSGQGHVAKDC-------------TVKSSIICYNCNSSGHFARNCPN---- 95
CY+C GH+AKDC S CY C GHFAR+C
Sbjct: 154 GGGGGPCYSCGEVGHLAKDCRGGSGGNRYGGGGRGSGSDGCYLCGGVGHFARDCRQNGGG 213
Query: 96 ------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C GH+A+ C S P CY CG GHL+ DC
Sbjct: 214 NVGGGGGGGNTCYTCGGVGHIARVCT------SKRP---SGGACYECGETGHLARDC 261
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 46/116 (39%), Gaps = 26/116 (22%)
Query: 58 TCYNCSGQGHVAKDC---------------TVKSSIICYNCNSSGHFARNCPNDSSKR-- 100
+C+NC GH+AKDC CY C GHFAR+C
Sbjct: 93 SCFNCGEVGHMAKDCDGGGGGRSYGGGGGRRSGGEGTCYVCGDVGHFARDCRQSGGGNSG 152
Query: 101 -------CYACHQAGHMAKEC--PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
CY+C + GH+AK+C S CY+CG GH + DC+
Sbjct: 153 GGGGGGPCYSCGEVGHLAKDCRGGSGGNRYGGGGRGSGSDGCYLCGGVGHFARDCR 208
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 59/161 (36%), Gaps = 41/161 (25%)
Query: 24 QKSSADARGDKVGIVCYKCNNYGHFAREC----------------ATESVTCYNCSGQGH 67
K +RG+ G C+ C GH A++C + TCY C GH
Sbjct: 81 NKKENSSRGN--GGSCFNCGEVGHMAKDCDGGGGGRSYGGGGGRRSGGEGTCYVCGDVGH 138
Query: 68 VAKDC---------TVKSSIICYNCNSSGHFARNC-------------PNDSSKRCYACH 105
A+DC CY+C GH A++C S CY C
Sbjct: 139 FARDCRQSGGGNSGGGGGGGPCYSCGEVGHLAKDCRGGSGGNRYGGGGRGSGSDGCYLCG 198
Query: 106 QAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GH A++C Q G + TCY CG GH++ C
Sbjct: 199 GVGHFARDCR-QNGGGNVGGGGGGGNTCYTCGGVGHIARVC 238
>gi|225680555|gb|EEH18839.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 242
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 65/156 (41%), Gaps = 44/156 (28%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFA------------- 49
+T T QCY+C GH Q CP + G CY CN GH A
Sbjct: 56 TTETKQCYHCQGLGHVQADCP---TLRLNGGATSGRCYNCNILGHLAFTAELPIYRHARC 112
Query: 50 -RECAT-----------------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNS--SGHF 89
+ C+ + TCY C G H A+DC + S+ CY C GH
Sbjct: 113 RKRCSISPWGFQLSLPWCIRRIDRTATCYKCGGPNHFARDCQAQ-SMKCYACGKLMQGHI 171
Query: 90 ARNC--PNDSS-----KRCYACHQAGHMAKECPGQT 118
+R+C PN K CY C QAGH++++CP T
Sbjct: 172 SRDCTAPNGGPLSSVGKVCYKCSQAGHISRDCPTNT 207
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 30/122 (24%)
Query: 8 QCYNCFDFGHYQYS----------CPQKSSADARGDKVGI-----------VCYKCNNYG 46
+CYNC GH ++ C ++ S G ++ + CYKC
Sbjct: 88 RCYNCNILGHLAFTAELPIYRHARCRKRCSISPWGFQLSLPWCIRRIDRTATCYKCGGPN 147
Query: 47 HFARECATESVTCYNCSG--QGHVAKDCTVK-----SSI--ICYNCNSSGHFARNCPNDS 97
HFAR+C +S+ CY C QGH+++DCT SS+ +CY C+ +GH +R+CP ++
Sbjct: 148 HFARDCQAQSMKCYACGKLMQGHISRDCTAPNGGPLSSVGKVCYKCSQAGHISRDCPTNT 207
Query: 98 SK 99
++
Sbjct: 208 TE 209
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 50/135 (37%), Gaps = 50/135 (37%)
Query: 50 RECATESVTCYNCSGQGHVAKDCTV------KSSIICYNCNSSGHFA------------- 90
R TE+ CY+C G GHV DC +S CYNCN GH A
Sbjct: 53 RPRTTETKQCYHCQGLGHVQADCPTLRLNGGATSGRCYNCNILGHLAFTAELPIYRHARC 112
Query: 91 -RNCP----------------NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTC 133
+ C D + CY C H A++C Q S+ C
Sbjct: 113 RKRCSISPWGFQLSLPWCIRRIDRTATCYKCGGPNHFARDCQAQ------------SMKC 160
Query: 134 YVCGH--QGHLSYDC 146
Y CG QGH+S DC
Sbjct: 161 YACGKLMQGHISRDC 175
>gi|58004795|gb|AAW62458.1| cellular nucleic acid binding protein mutant 1-4 [synthetic
construct]
Length = 126
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 22/123 (17%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADAR-------------------GDKVGIVCYKCNN 44
S+ +C+ C GH+ CP + +CY+C
Sbjct: 1 MSSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGE 60
Query: 45 YGHFARECATESVTCYNCSGQGHVAKDCTV---KSSIICYNCNSSGHFARNCPNDSSKRC 101
GH A++C + CYNC GH+AKDC + CYNC GH AR+C + ++C
Sbjct: 61 SGHLAKDCDLQEDACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDCEHADEQKC 120
Query: 102 YAC 104
Y+C
Sbjct: 121 YSC 123
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT------VKSSI--ICYNCNSSGHFA 90
C+KC GH+AREC T + + SS+ ICY C SGH A
Sbjct: 6 CFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGESGHLA 65
Query: 91 RNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
++C + CY C + GH+AK+C EP + CY CG GHL+ DC+
Sbjct: 66 KDC-DLQEDACYNCGRGGHIAKDCK--------EPRKEREQCCYNCGKPGHLARDCE 113
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 40/105 (38%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKR----------------------------CYACHQA 107
SS C+ C +GH+AR CP + CY C ++
Sbjct: 2 SSNECFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRGFQFISSSLPDICYRCGES 61
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
GH+AK+C Q CY CG GH++ DCK +K
Sbjct: 62 GHLAKDCDLQED------------ACYNCGRGGHIAKDCKEPRKE 94
>gi|440635159|gb|ELR05078.1| hypothetical protein GMDG_07120 [Geomyces destructans 20631-21]
Length = 212
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 62/155 (40%), Gaps = 50/155 (32%)
Query: 9 CYNCFDFGHYQYSCPQKSS-----ADARGDKVGIVCYKCNNYGHFARECATESV------ 57
CY C GH C ++ + G G CYKC+ GH AR C
Sbjct: 56 CYKCGQPGHISRDCANPAAEGMGAGRSFGGGAGQECYKCSKVGHIARNCPEAGAGGYQNA 115
Query: 58 -----------------------------------TCYNCSGQGHVAKDCTVKSSIICYN 82
TCY+C G GH+++DCT CYN
Sbjct: 116 GYGGGGGGYGGGGAGYGGGGAGYGGGAGGYGGRQQTCYSCGGVGHMSRDCT--QGQKCYN 173
Query: 83 CNSSGHFARNCPNDSS--KRCYACHQAGHMAKECP 115
C +GH +R+CP+++S + CY C Q GH+ +CP
Sbjct: 174 CGQTGHLSRDCPSETSAERTCYKCRQPGHVQAQCP 208
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Query: 44 NYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN-DSSKRCY 102
NYG E + CYNC Q H A+DC + CYNC GH +R CP K CY
Sbjct: 2 NYG----EAPQQQRGCYNCGDQSHQARDCPTRGPAKCYNCGGEGHMSRECPEGPKDKTCY 57
Query: 103 ACHQAGHMAKEC-----PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C Q GH++++C G AG+S CY C GH++ +C
Sbjct: 58 KCGQPGHISRDCANPAAEGMGAGRS--FGGGAGQECYKCSKVGHIARNC 104
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 70/194 (36%), Gaps = 78/194 (40%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQG 66
CYNC D H CP + A CY C GH +REC + TCY C G
Sbjct: 13 CYNCGDQSHQARDCPTRGPAK---------CYNCGGEGHMSRECPEGPKDKTCYKCGQPG 63
Query: 67 HVAKDCTVKSS--------------IICYNCNSSGHFARNCPNDSS-------------- 98
H+++DC ++ CY C+ GH ARNCP +
Sbjct: 64 HISRDCANPAAEGMGAGRSFGGGAGQECYKCSKVGHIARNCPEAGAGGYQNAGYGGGGGG 123
Query: 99 --------------------------KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLT 132
+ CY+C GHM+++C T G+
Sbjct: 124 YGGGGAGYGGGGAGYGGGAGGYGGRQQTCYSCGGVGHMSRDC---TQGQK---------- 170
Query: 133 CYVCGHQGHLSYDC 146
CY CG GHLS DC
Sbjct: 171 CYNCGQTGHLSRDC 184
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 73/203 (35%), Gaps = 74/203 (36%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---- 58
+ +CYNC GH CP+ DK CYKC GH +R+CA +
Sbjct: 28 TRGPAKCYNCGGEGHMSRECPEGPK-----DKT---CYKCGQPGHISRDCANPAAEGMGA 79
Query: 59 -----------CYNCSGQGHVAKDCTVKSSI----------------------------- 78
CY CS GH+A++C +
Sbjct: 80 GRSFGGGAGQECYKCSKVGHIARNCPEAGAGGYQNAGYGGGGGGYGGGGAGYGGGGAGYG 139
Query: 79 -----------ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVV 127
CY+C GH +R+C ++CY C Q GH++++CP +T+
Sbjct: 140 GGAGGYGGRQQTCYSCGGVGHMSRDC--TQGQKCYNCGQTGHLSRDCPSETS-------- 189
Query: 128 DMSLTCYVCGHQGHLSYDCKLVQ 150
TCY C GH+ C Q
Sbjct: 190 -AERTCYKCRQPGHVQAQCPENQ 211
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 62/158 (39%), Gaps = 45/158 (28%)
Query: 39 CYKCNNYGHFARECATES-VTCYNCSGQGHVAKDCTV-KSSIICYNCNSSGHFARNCPND 96
CY C + H AR+C T CYNC G+GH++++C CY C GH +R+C N
Sbjct: 13 CYNCGDQSHQARDCPTRGPAKCYNCGGEGHMSRECPEGPKDKTCYKCGQPGHISRDCANP 72
Query: 97 SS--------------KRCYACHQAGHMAKECPGQTAGKSPEPVVD-------------- 128
++ + CY C + GH+A+ CP AG
Sbjct: 73 AAEGMGAGRSFGGGAGQECYKCSKVGHIARNCPEAGAGGYQNAGYGGGGGGYGGGGAGYG 132
Query: 129 ---------------MSLTCYVCGHQGHLSYDCKLVQK 151
TCY CG GH+S DC QK
Sbjct: 133 GGGAGYGGGAGGYGGRQQTCYSCGGVGHMSRDCTQGQK 170
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI--ICYNCNSSGHFARNCPN 95
CY C GH +R+C T+ CYNC GH+++DC ++S CY C GH CP
Sbjct: 151 TCYSCGGVGHMSRDC-TQGQKCYNCGQTGHLSRDCPSETSAERTCYKCRQPGHVQAQCPE 209
Query: 96 DSS 98
+ +
Sbjct: 210 NQN 212
>gi|393245699|gb|EJD53209.1| hypothetical protein AURDEDRAFT_54325 [Auricularia delicata
TFB-10046 SS5]
Length = 177
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 58/121 (47%), Gaps = 19/121 (15%)
Query: 46 GHFARECATESV-TCYNCSGQGHVAKDCTV-KSSIICYNCNSSGHFARNCPNDSSKR--- 100
GH A +C TCYNC G+GH+++DCT + + CY C +R+CP+++ R
Sbjct: 37 GHQASQCPKAGTPTCYNCGGEGHLSRDCTTEQKAKACYKC----QLSRDCPDNTGARNGG 92
Query: 101 ----------CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
CY C +AGH+A+ CP + S Y CG GHLS DC
Sbjct: 93 GPFSGNSSAECYRCGKAGHIARACPDAQSSGGYGNFSSSSSRTYTCGGVGHLSRDCTQGA 152
Query: 151 K 151
K
Sbjct: 153 K 153
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 62/163 (38%), Gaps = 52/163 (31%)
Query: 10 YNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE--SVTCYNCSGQGH 67
N GH CP+ + CY C GH +R+C TE + CY C
Sbjct: 31 LNPSPVGHQASQCPKAGTP---------TCYNCGGEGHLSRDCTTEQKAKACYKC----Q 77
Query: 68 VAKDC-------------TVKSSIICYNCNSSGHFARNCPN-----------DSSKRCYA 103
+++DC + SS CY C +GH AR CP+ SS R Y
Sbjct: 78 LSRDCPDNTGARNGGGPFSGNSSAECYRCGKAGHIARACPDAQSSGGYGNFSSSSSRTYT 137
Query: 104 CHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C GH++++C CY C GH+S DC
Sbjct: 138 CGGVGHLSRDC-------------TQGAKCYNCNGSGHISRDC 167
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 56/132 (42%), Gaps = 36/132 (27%)
Query: 6 TIQCYNCFDFGHYQYSC--PQKSSA-----------DARGDKVG---------IVCYKCN 43
T CYNC GH C QK+ A D G + G CY+C
Sbjct: 48 TPTCYNCGGEGHLSRDCTTEQKAKACYKCQLSRDCPDNTGARNGGGPFSGNSSAECYRCG 107
Query: 44 NYGHFAREC------------ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFAR 91
GH AR C ++ S Y C G GH+++DCT + CYNCN SGH +R
Sbjct: 108 KAGHIARACPDAQSSGGYGNFSSSSSRTYTCGGVGHLSRDCTQGAK--CYNCNGSGHISR 165
Query: 92 NCPNDSSKRCYA 103
+CP ++ A
Sbjct: 166 DCPGPATTEAEA 177
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 60 YNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND-SSKRCYACHQAGHMAKECPGQT 118
N S GH A C + CYNC GH +R+C + +K CY C ++++CP T
Sbjct: 31 LNPSPVGHQASQCPKAGTPTCYNCGGEGHLSRDCTTEQKAKACYKC----QLSRDCPDNT 86
Query: 119 AGKSPEPVV--DMSLTCYVCGHQGHLSYDCKLVQKS 152
++ + S CY CG GH++ C Q S
Sbjct: 87 GARNGGGPFSGNSSAECYRCGKAGHIARACPDAQSS 122
>gi|222616180|gb|EEE52312.1| hypothetical protein OsJ_34326 [Oryza sativa Japonica Group]
Length = 800
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 75/177 (42%), Gaps = 42/177 (23%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+NC + GH +CP +K C+ C +GH +++C T+ C+ C GH+
Sbjct: 220 CFNCGEEGHVAVNCPM--------EKRKRPCFVCGLFGHNSKQC-TQGQDCFICKKGGHI 270
Query: 69 AKDCTVK------SSIICYNCNSSGHFARNCPNDSSK------RCYACHQAGHM------ 110
AKDC K S C C SGH C ND + +CY C+Q GH+
Sbjct: 271 AKDCPEKHNRNTQQSTFCLRCGESGHDMFGCANDYPRDDVKEIKCYVCNQKGHLCCADFS 330
Query: 111 ---AKEC-------PGQT----AGKSPEPVVDMSLT-CYVCGHQGHLSYDCKLVQKS 152
KE PG T A + E + T CY CG +GH + C KS
Sbjct: 331 DICPKEVSCYNCAQPGHTGLGCAKQRREASTAATPTLCYKCGEEGHFARGCTKNTKS 387
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 37 IVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTV-KSSIICYNCNSSGHFARNCPN 95
IV K + T TC+NC +GHVA +C + K C+ C GH ++ C
Sbjct: 198 IVLRKLLRIPRYFDPGETLLETCFNCGEEGHVAVNCPMEKRKRPCFVCGLFGHNSKQC-- 255
Query: 96 DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ C+ C + GH+AK+CP + + S C CG GH + C
Sbjct: 256 TQGQDCFICKKGGHIAKDCPEKHNRNT-----QQSTFCLRCGESGHDMFGC 301
>gi|18398546|ref|NP_565427.1| cold shock domain protein 3 [Arabidopsis thaliana]
gi|75165198|sp|Q94C69.1|CSP3_ARATH RecName: Full=Cold shock domain-containing protein 3; Short=AtCSP3
gi|14334920|gb|AAK59638.1| putative glycine-rich, zinc-finger DNA-binding protein [Arabidopsis
thaliana]
gi|17104541|gb|AAL34159.1| putative glycine-rich, zinc-finger DNA-binding protein [Arabidopsis
thaliana]
gi|148726892|dbj|BAF63841.1| cold shock domain protein 3 [Arabidopsis thaliana]
gi|330251603|gb|AEC06697.1| cold shock domain protein 3 [Arabidopsis thaliana]
Length = 301
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 67/183 (36%), Gaps = 42/183 (22%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIV------CYKCNNYGHFARECATE 55
S S C+NC + GH C S + G G CY C + GHFAR+C
Sbjct: 89 SRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGGGGGRRSGGEGECYMCGDVGHFARDCRQS 148
Query: 56 SVT-----------CYNCSGQGHVAKDC--------------TVKSSIICYNCNSSGHFA 90
CY+C GH+AKDC CY C GHFA
Sbjct: 149 GGGNSGGGGGGGRPCYSCGEVGHLAKDCRGGSGGNRYGGGGGRGSGGDGCYMCGGVGHFA 208
Query: 91 RNCPN-------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLS 143
R+C CY C GH+AK C K P CY CG GHL+
Sbjct: 209 RDCRQNGGGNVGGGGSTCYTCGGVGHIAKVC----TSKIPSGGGGGGRACYECGGTGHLA 264
Query: 144 YDC 146
DC
Sbjct: 265 RDC 267
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 57/135 (42%), Gaps = 29/135 (21%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV-----CYKCNNYGHFAREC--------ATE 55
CY+C + GH C S + G G CY C GHFAR+C
Sbjct: 163 CYSCGEVGHLAKDCRGGSGGNRYGGGGGRGSGGDGCYMCGGVGHFARDCRQNGGGNVGGG 222
Query: 56 SVTCYNCSGQGHVAKDCTVK-------SSIICYNCNSSGHFARNCPN---------DSSK 99
TCY C G GH+AK CT K CY C +GH AR+C S
Sbjct: 223 GSTCYTCGGVGHIAKVCTSKIPSGGGGGGRACYECGGTGHLARDCDRRGSGSSGGGGGSN 282
Query: 100 RCYACHQAGHMAKEC 114
+C+ C + GH A+EC
Sbjct: 283 KCFICGKEGHFAREC 297
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 68/171 (39%), Gaps = 32/171 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV-CYKCNNYGHFARECATESVT--------- 58
CY C D GH+ C Q ++ G G CY C GH A++C S
Sbjct: 132 CYMCGDVGHFARDCRQSGGGNSGGGGGGGRPCYSCGEVGHLAKDCRGGSGGNRYGGGGGR 191
Query: 59 ------CYNCSGQGHVAKDC-------TVKSSIICYNCNSSGHFARNCPND-------SS 98
CY C G GH A+DC CY C GH A+ C +
Sbjct: 192 GSGGDGCYMCGGVGHFARDCRQNGGGNVGGGGSTCYTCGGVGHIAKVCTSKIPSGGGGGG 251
Query: 99 KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
+ CY C GH+A++C + + S C++CG +GH + +C V
Sbjct: 252 RACYECGGTGHLARDCDRRGS--GSSGGGGGSNKCFICGKEGHFARECTSV 300
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 46/117 (39%), Gaps = 28/117 (23%)
Query: 59 CYNCSGQGHVAKDC---------------TVKSSIICYNCNSSGHFARNCPNDSS----- 98
C+NC GH+AKDC CY C GHFAR+C
Sbjct: 96 CFNCGEVGHMAKDCDGGSGGKSFGGGGGRRSGGEGECYMCGDVGHFARDCRQSGGGNSGG 155
Query: 99 -----KRCYACHQAGHMAKEC---PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ CY+C + GH+AK+C G CY+CG GH + DC+
Sbjct: 156 GGGGGRPCYSCGEVGHLAKDCRGGSGGNRYGGGGGRGSGGDGCYMCGGVGHFARDCR 212
>gi|156055020|ref|XP_001593434.1| hypothetical protein SS1G_04861 [Sclerotinia sclerotiorum 1980]
gi|154702646|gb|EDO02385.1| hypothetical protein SS1G_04861 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 210
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 76/195 (38%), Gaps = 64/195 (32%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---- 58
S +CYNC + GH CP+ VCY+C GH +++C+
Sbjct: 31 SRGPAKCYNCDNPGHLSRDCPEGPKEK--------VCYRCGTSGHISKDCSNPPTEGAGR 82
Query: 59 ---------------CYNCSGQGHVAKDC--------------------------TVKSS 77
CY CS GH+A++C + S
Sbjct: 83 GGGYGGGYGGGGGQQCYKCSKIGHIARNCPEAGGYGGNQGYGGNQGGYGGGFGGGARQGS 142
Query: 78 IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCG 137
C++C GH +R+C ++CY C + GH++++C +T+ + CY C
Sbjct: 143 QTCFSCGGYGHLSRDC--TQGQKCYNCGEVGHLSRDCSQETS---------EARRCYECK 191
Query: 138 HQGHLSYDCKLVQKS 152
+GH DC L +K+
Sbjct: 192 QEGHEKLDCPLRKKA 206
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 62/143 (43%), Gaps = 35/143 (24%)
Query: 44 NYGHFARECATES-VTCYNCSGQGHVAKDCTV-KSSIICYNCNSSGHFARNCPNDSS--- 98
N GH AREC + CYNC GH+++DC +CY C +SGH +++C N +
Sbjct: 21 NEGHQARECPSRGPAKCYNCDNPGHLSRDCPEGPKEKVCYRCGTSGHISKDCSNPPTEGA 80
Query: 99 ---------------KRCYACHQAGHMAKECP---------------GQTAGKSPEPVVD 128
++CY C + GH+A+ CP G G
Sbjct: 81 GRGGGYGGGYGGGGGQQCYKCSKIGHIARNCPEAGGYGGNQGYGGNQGGYGGGFGGGARQ 140
Query: 129 MSLTCYVCGHQGHLSYDCKLVQK 151
S TC+ CG GHLS DC QK
Sbjct: 141 GSQTCFSCGGYGHLSRDCTQGQK 163
>gi|361067839|gb|AEW08231.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139387|gb|AFG50921.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139389|gb|AFG50922.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139391|gb|AFG50923.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139393|gb|AFG50924.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139395|gb|AFG50925.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139397|gb|AFG50926.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139399|gb|AFG50927.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139401|gb|AFG50928.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139403|gb|AFG50929.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139405|gb|AFG50930.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139407|gb|AFG50931.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139409|gb|AFG50932.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139411|gb|AFG50933.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139413|gb|AFG50934.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139415|gb|AFG50935.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139417|gb|AFG50936.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
gi|383139419|gb|AFG50937.1| Pinus taeda anonymous locus 2_3682_01 genomic sequence
Length = 139
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 21/118 (17%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------ 57
T+ C+NC + GH C +C+ C GH +R+C +
Sbjct: 26 TTKSLCWNCREPGHVASQCSNDP-----------ICHTCGKSGHLSRDCTAPELPPGDIR 74
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
C NC QGH+A +CT + + C NC +GH AR+C N+ C C+ +GH+A+ECP
Sbjct: 75 LCNNCYKQGHIAAECTNEKA--CNNCRKTGHLARDCTNNPV--CNLCNISGHVARECP 128
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 11/100 (11%)
Query: 47 HFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQ 106
HFAR+C +V C NC GH+A +CT KS +C+NC GH A C ND C+ C +
Sbjct: 1 HFARDCPNVAV-CNNCGLPGHIAVECTTKS--LCWNCREPGHVASQCSNDPI--CHTCGK 55
Query: 107 AGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+GH++++C TA + P + + CY QGH++ +C
Sbjct: 56 SGHLSRDC---TAPELPPGDIRLCNNCY---KQGHIAAEC 89
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 61/135 (45%), Gaps = 32/135 (23%)
Query: 17 HYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKS 76
H+ CP + VC C GH A EC T+S+ C+NC GHVA C+ +
Sbjct: 1 HFARDCPNVA-----------VCNNCGLPGHIAVECTTKSL-CWNCREPGHVASQCS--N 46
Query: 77 SIICYNCNSSGHFARNC-----PNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSL 131
IC+ C SGH +R+C P + C C++ GH+A EC + A
Sbjct: 47 DPICHTCGKSGHLSRDCTAPELPPGDIRLCNNCYKQGHIAAECTNEKA------------ 94
Query: 132 TCYVCGHQGHLSYDC 146
C C GHL+ DC
Sbjct: 95 -CNNCRKTGHLARDC 108
>gi|342882084|gb|EGU82838.1| hypothetical protein FOXB_06641 [Fusarium oxysporum Fo5176]
Length = 181
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 64/153 (41%), Gaps = 57/153 (37%)
Query: 38 VCYKCNNYGHFARECATES-VTCYNCSGQGHVAKDCT--VKSSIICYNCNSSGHFARNCP 94
CY C + GH AR+C T+ CYNC G+GH+++DCT +K + CY C GH +R+CP
Sbjct: 15 ACYSCGSTGHQARDCPTKGPAKCYNCGGEGHMSRDCTEPMKDNKSCYKCGQPGHISRDCP 74
Query: 95 --------------------------NDSS---------------KRCYACHQAGHMAKE 113
N SS K CY+C GHM++E
Sbjct: 75 MSGGSGQATECYKASLFVLQTTAAANNVSSSYGNNYGGGFGGGAGKTCYSCGGYGHMSRE 134
Query: 114 CPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C + CY CG GH S DC
Sbjct: 135 CVN-------------GMKCYNCGESGHYSRDC 154
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 65/153 (42%), Gaps = 54/153 (35%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--------ATE---- 55
+CYNC GH C + K CYKC GH +R+C ATE
Sbjct: 36 KCYNCGGEGHMSRDCTEPM-------KDNKSCYKCGQPGHISRDCPMSGGSGQATECYKA 88
Query: 56 ------------------------------SVTCYNCSGQGHVAKDCTVKSSIICYNCNS 85
TCY+C G GH++++C + + CYNC
Sbjct: 89 SLFVLQTTAAANNVSSSYGNNYGGGFGGGAGKTCYSCGGYGHMSRECV--NGMKCYNCGE 146
Query: 86 SGHFARNCPNDSS---KRCYACHQAGHMAKECP 115
SGH++R+CP +S+ K CY C Q GH+ +CP
Sbjct: 147 SGHYSRDCPKESAGGEKICYKCQQPGHVQSQCP 179
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSS---IICYNCNSSGHFARNCP 94
CY C YGH +REC + CYNC GH ++DC +S+ ICY C GH CP
Sbjct: 121 TCYSCGGYGHMSRECVN-GMKCYNCGESGHYSRDCPKESAGGEKICYKCQQPGHVQSQCP 179
Query: 95 ND 96
++
Sbjct: 180 SN 181
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT 54
++CYNC + GHY CP++S A G+K +CYKC GH +C +
Sbjct: 139 MKCYNCGESGHYSRDCPKES---AGGEK---ICYKCQQPGHVQSQCPS 180
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 14/61 (22%)
Query: 101 CYACHQAGHMAKECP-------------GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
CY+C GH A++CP G + EP+ D + +CY CG GH+S DC
Sbjct: 16 CYSCGSTGHQARDCPTKGPAKCYNCGGEGHMSRDCTEPMKD-NKSCYKCGQPGHISRDCP 74
Query: 148 L 148
+
Sbjct: 75 M 75
>gi|320166376|gb|EFW43275.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1075
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 55/136 (40%), Gaps = 26/136 (19%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
I+C+NC GH CP K CY C GH +C + TCY C G G
Sbjct: 361 IRCHNCDQMGHISRDCPNKRRVSP--------CYLCGEPGHTRFKCPNQ--TCYACFGAG 410
Query: 67 HVAKDC---TVKSSIICYNCNSSGHFARNCPN-------------DSSKRCYACHQAGHM 110
H+ +DC K I+C C GHF NC + +SS R +
Sbjct: 411 HMMRDCRRRAAKPHILCRRCKMRGHFEANCTDVWRQYHHQHAALRESSCRDFLGFPNLRD 470
Query: 111 AKECPGQTAGKSPEPV 126
C Q+ G+S +PV
Sbjct: 471 PSGCSVQSLGRSNQPV 486
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 12/91 (13%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSII-CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
+ C+NC GH+++DC K + CY C GH CPN + CYAC AGHM ++C
Sbjct: 361 IRCHNCDQMGHISRDCPNKRRVSPCYLCGEPGHTRFKCPNQT---CYACFGAGHMMRDCR 417
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ A + C C +GH +C
Sbjct: 418 RRAAKP--------HILCRRCKMRGHFEANC 440
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 15/71 (21%)
Query: 78 IICYNCNSSGHFARNCPNDSS-KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVC 136
I C+NC+ GH +R+CPN CY C + GH +CP Q TCY C
Sbjct: 361 IRCHNCDQMGHISRDCPNKRRVSPCYLCGEPGHTRFKCPNQ--------------TCYAC 406
Query: 137 GHQGHLSYDCK 147
GH+ DC+
Sbjct: 407 FGAGHMMRDCR 417
>gi|169596941|ref|XP_001791894.1| hypothetical protein SNOG_01247 [Phaeosphaeria nodorum SN15]
gi|160707406|gb|EAT90896.2| hypothetical protein SNOG_01247 [Phaeosphaeria nodorum SN15]
Length = 651
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN-DSSKRCYACHQAGHMAKEC 114
CYNC H A +C K + CYNC GH +R C N + K CY C GH+++EC
Sbjct: 518 CYNCGDSSHRAAECPTKGTPTCYNCGEKGHVSRECQNPQAEKTCYRCGGTGHISREC 574
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 10/67 (14%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
CYNC S H A CP + CY C + GH+++EC A K TCY CG
Sbjct: 518 CYNCGDSSHRAAECPTKGTPTCYNCGEKGHVSRECQNPQAEK----------TCYRCGGT 567
Query: 140 GHLSYDC 146
GH+S +C
Sbjct: 568 GHISREC 574
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 32/67 (47%), Gaps = 11/67 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV--TCYNCSGQG 66
CYNC D H CP K + CY C GH +REC TCY C G G
Sbjct: 518 CYNCGDSSHRAAECPTKGTP---------TCYNCGEKGHVSRECQNPQAEKTCYRCGGTG 568
Query: 67 HVAKDCT 73
H++++CT
Sbjct: 569 HISRECT 575
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 23 PQKSSADARGDKVGIVCYKCNNYGHFARECATESV-TCYNCSGQGHVAKDC-TVKSSIIC 80
P +RG CY C + H A EC T+ TCYNC +GHV+++C ++ C
Sbjct: 508 PATGGGGSRG------CYNCGDSSHRAAECPTKGTPTCYNCGEKGHVSRECQNPQAEKTC 561
Query: 81 YNCNSSGHFARNCPND 96
Y C +GH +R C +
Sbjct: 562 YRCGGTGHISRECTKE 577
Score = 41.6 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
S+ CY C + H A ECP T G TCY CG +GH+S +C+
Sbjct: 515 SRGCYNCGDSSHRAAECP--TKGTP---------TCYNCGEKGHVSRECQ 553
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 8/53 (15%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE 55
+ T CYNC + GH C Q A+ CY+C GH +REC E
Sbjct: 533 TKGTPTCYNCGEKGHVSREC-QNPQAEK-------TCYRCGGTGHISRECTKE 577
>gi|413942254|gb|AFW74903.1| hypothetical protein ZEAMMB73_929566 [Zea mays]
Length = 647
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 67/163 (41%), Gaps = 34/163 (20%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TESVTC 59
+ T CY C GH+ SCP K ++AR CY+C GH + C +E C
Sbjct: 370 SKTRTCYECGTPGHFSSSCPNKKDSEARK------CYECGTPGHLSSACPNKKDSEVRKC 423
Query: 60 YNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR--CYACHQAGHMAKECPGQ 117
Y C GH++ C K NS+ A S KR CY C GH++ CP +
Sbjct: 424 YECGTAGHLSSACPNKKDSDEKEDNSNSTIAA-----SKKRRTCYECGIPGHLSSNCPNK 478
Query: 118 TAGKSPEPVVD--------------MSLTCYVCGHQGHLSYDC 146
K PE + D TCY CG GHLS C
Sbjct: 479 ---KDPEFISDEKNTNVDSAPASSKKRRTCYECGTPGHLSSAC 518
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 14/119 (11%)
Query: 41 KCNNYGHFARECATESVTCYNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNCPN-- 95
K N+ G+ + +++ TCY C GH + C K + CY C + GH + CPN
Sbjct: 358 KVNDNGN-SDHLKSKTRTCYECGTPGHFSSSCPNKKDSEARKCYECGTPGHLSSACPNKK 416
Query: 96 DSS-KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSL-------TCYVCGHQGHLSYDC 146
DS ++CY C AGH++ CP + E + ++ TCY CG GHLS +C
Sbjct: 417 DSEVRKCYECGTAGHLSSACPNKKDSDEKEDNSNSTIAASKKRRTCYECGIPGHLSSNC 475
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 72/219 (32%), Gaps = 81/219 (36%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGD---------KVGIVCYKCNNYGHFARECATESVT 58
+CY C GH +CP K +D + D K CY+C GH + C +
Sbjct: 422 KCYECGTAGHLSSACPNKKDSDEKEDNSNSTIAASKKRRTCYECGIPGHLSSNCPNKKDP 481
Query: 59 CYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCPNDSS----------------- 98
+ S + + D SS CY C + GH + CPN +
Sbjct: 482 EF-ISDEKNTNVDSAPASSKKRRTCYECGTPGHLSSACPNKRTSESVLNNREPADAKPAT 540
Query: 99 ---------------------KRCYACHQAGHMAKECPGQTAGK-------------SPE 124
++CY C +GH++ CP + A + +
Sbjct: 541 TIKPEETKAGDESNSVASKKRRKCYECGISGHLSSACPSKKAAEPVCNEEKPGNHSNAVL 600
Query: 125 PVVD-----------------MSLTCYVCGHQGHLSYDC 146
PVV TCY CG GHLS +C
Sbjct: 601 PVVSDEKKASEDAKSAPAKKKKRRTCYECGIAGHLSSEC 639
>gi|239613570|gb|EEQ90557.1| zinc knuckle domain-containing protein [Ajellomyces dermatitidis
ER-3]
Length = 185
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 57/139 (41%), Gaps = 34/139 (24%)
Query: 9 CYNCFDFGHYQYSCPQKSSAD--------ARGDKVGIVCYKCNNYGHFARECA------- 53
CY C GH C S D G G CYKC GH AR C+
Sbjct: 48 CYRCGQTGHISRDCTSAGSGDNYTSGGYSGGGAAGGQECYKCGQVGHIARNCSQSGGYGS 107
Query: 54 ---------------TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS- 97
TCY+C G GH+A+DCT CYNC GH +R+CP ++
Sbjct: 108 AGYGGAGGYGGGYGGGRQQTCYSCGGYGHMARDCT--QGQKCYNCGEVGHVSRDCPTEAK 165
Query: 98 -SKRCYACHQAGHMAKECP 115
+ CY C Q GH+ CP
Sbjct: 166 GERVCYKCKQTGHVQAACP 184
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 45/102 (44%), Gaps = 15/102 (14%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGI------------VCYKCNNYGHFARECATE 55
+CY C GH +C Q + G CY C YGH AR+C T+
Sbjct: 85 ECYKCGQVGHIARNCSQSGGYGSAGYGGAGGYGGGYGGGRQQTCYSCGGYGHMARDC-TQ 143
Query: 56 SVTCYNCSGQGHVAKDC--TVKSSIICYNCNSSGHFARNCPN 95
CYNC GHV++DC K +CY C +GH CPN
Sbjct: 144 GQKCYNCGEVGHVSRDCPTEAKGERVCYKCKQTGHVQAACPN 185
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 67/183 (36%), Gaps = 67/183 (36%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQG 66
C+NC + H CP+K + CY C REC A + TCY C G
Sbjct: 10 CFNCGEASHQARDCPKKGTP---------TCYNCG-----GRECTAAPKEKTCYRCGQTG 55
Query: 67 HVAKDCTVKSS-----------------IICYNCNSSGHFARNCPNDS------------ 97
H+++DCT S CY C GH ARNC
Sbjct: 56 HISRDCTSAGSGDNYTSGGYSGGGAAGGQECYKCGQVGHIARNCSQSGGYGSAGYGGAGG 115
Query: 98 ---------SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+ CY+C GHMA++C T G+ CY CG GH+S DC
Sbjct: 116 YGGGYGGGRQQTCYSCGGYGHMARDC---TQGQK----------CYNCGEVGHVSRDCPT 162
Query: 149 VQK 151
K
Sbjct: 163 EAK 165
>gi|154288428|ref|XP_001545009.1| hypothetical protein HCAG_02056 [Ajellomyces capsulatus NAm1]
gi|150408650|gb|EDN04191.1| hypothetical protein HCAG_02056 [Ajellomyces capsulatus NAm1]
Length = 191
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 59/143 (41%), Gaps = 38/143 (26%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV----------CYKCNNYGHFARECA----- 53
CY C GH C S D+ G+ G CYKC GH AR C+
Sbjct: 50 CYRCGQAGHISRDCTSAGSGDSYGNSGGYSGGGGAAGGQECYKCGQVGHIARNCSQSGGY 109
Query: 54 -------------------TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
TCY+C G GH+A+DCT CYNC GH +R+CP
Sbjct: 110 GSGGYGGATGGGYSGGYGGGRQQTCYSCGGYGHMARDCTQGQK--CYNCGEVGHVSRDCP 167
Query: 95 NDS--SKRCYACHQAGHMAKECP 115
++ + CY C Q GH+ CP
Sbjct: 168 TEAKGERVCYKCKQPGHVQATCP 190
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 44/104 (42%), Gaps = 17/104 (16%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGI--------------VCYKCNNYGHFARECA 53
+CY C GH +C Q + G CY C YGH AR+C
Sbjct: 89 ECYKCGQVGHIARNCSQSGGYGSGGYGGATGGGYSGGYGGGRQQTCYSCGGYGHMARDC- 147
Query: 54 TESVTCYNCSGQGHVAKDC--TVKSSIICYNCNSSGHFARNCPN 95
T+ CYNC GHV++DC K +CY C GH CPN
Sbjct: 148 TQGQKCYNCGEVGHVSRDCPTEAKGERVCYKCKQPGHVQATCPN 191
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 56/152 (36%), Gaps = 54/152 (35%)
Query: 38 VCYKCNNYGHFARECATESV--------------------TCYNCSGQGHVAKDCT---- 73
CY+C GH +R+C + CY C GH+A++C+
Sbjct: 49 TCYRCGQAGHISRDCTSAGSGDSYGNSGGYSGGGGAAGGQECYKCGQVGHIARNCSQSGG 108
Query: 74 -------------------VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
CY+C GH AR+C ++CY C + GH++++C
Sbjct: 109 YGSGGYGGATGGGYSGGYGGGRQQTCYSCGGYGHMARDC--TQGQKCYNCGEVGHVSRDC 166
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
P + G+ CY C GH+ C
Sbjct: 167 PTEAKGER---------VCYKCKQPGHVQATC 189
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 53/148 (35%), Gaps = 57/148 (38%)
Query: 49 AREC--ATESVTCYNCSGQGHVAKDCTVKSS-------------------IICYNCNSSG 87
REC A + TCY C GH+++DCT S CY C G
Sbjct: 38 GRECTAAPKEKTCYRCGQAGHISRDCTSAGSGDSYGNSGGYSGGGGAAGGQECYKCGQVG 97
Query: 88 HFARNCPN-----------------------DSSKRCYACHQAGHMAKECPGQTAGKSPE 124
H ARNC + CY+C GHMA++C T G+
Sbjct: 98 HIARNCSQSGGYGSGGYGGATGGGYSGGYGGGRQQTCYSCGGYGHMARDC---TQGQK-- 152
Query: 125 PVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
CY CG GH+S DC K
Sbjct: 153 --------CYNCGEVGHVSRDCPTEAKG 172
>gi|440474066|gb|ELQ42833.1| zinc finger protein GIS2 [Magnaporthe oryzae Y34]
gi|440485892|gb|ELQ65808.1| zinc finger protein GIS2 [Magnaporthe oryzae P131]
Length = 487
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 66/155 (42%), Gaps = 23/155 (14%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV--- 57
M T +C NC GH + CP+ + I C+ C GH R+C T V
Sbjct: 264 MVKTLVPRCRNCDALGHDRRQCPEDP---IEKQQQAITCFNCGETGHRVRDCTTPRVDKF 320
Query: 58 TCYNCSGQGHVAKDC----TVKSSIICYNCNSSG-HFARNCPNDSSKR-CYACHQAGHMA 111
C NC+ GH AK+C V + C C G H+ ++CP + R C+ C HM+
Sbjct: 321 ACKNCNKSGHTAKECPEPRPVPEDLECTKCGEIGKHWRKDCPQGAQSRACHNCGAEDHMS 380
Query: 112 KECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++C EP + C C H++ DC
Sbjct: 381 RDC--------TEP---RRMKCRNCDEFDHVAKDC 404
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 59/132 (44%), Gaps = 27/132 (20%)
Query: 32 GDKVGIVCYKCNN---YGHFARECATE-------SVTCYNCSGQGHVAKDCTVK--SSII 79
GD V + +C N GH R+C + ++TC+NC GH +DCT
Sbjct: 262 GDMVKTLVPRCRNCDALGHDRRQCPEDPIEKQQQAITCFNCGETGHRVRDCTTPRVDKFA 321
Query: 80 CYNCNSSGHFARNCPN----DSSKRCYACHQAG-HMAKECPGQTAGKSPEPVVDMSLTCY 134
C NCN SGH A+ CP C C + G H K+CP Q A S C+
Sbjct: 322 CKNCNKSGHTAKECPEPRPVPEDLECTKCGEIGKHWRKDCP-QGA---------QSRACH 371
Query: 135 VCGHQGHLSYDC 146
CG + H+S DC
Sbjct: 372 NCGAEDHMSRDC 383
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYG-HFAREC--ATESVTCYNCSGQ 65
C NC GH CP+ R + C KC G H+ ++C +S C+NC +
Sbjct: 322 CKNCNKSGHTAKECPE-----PRPVPEDLECTKCGEIGKHWRKDCPQGAQSRACHNCGAE 376
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNC--PNDSSK-RCYACHQAGHMAKECP 115
H+++DCT + C NC+ H A++C P D S+ +C C + GH +CP
Sbjct: 377 DHMSRDCTEPRRMKCRNCDEFDHVAKDCPKPRDMSRVKCMNCSEMGHFKSKCP 429
>gi|154305586|ref|XP_001553195.1| hypothetical protein BC1G_08562 [Botryotinia fuckeliana B05.10]
Length = 254
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 73/183 (39%), Gaps = 53/183 (28%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAR-----ECATE 55
MSS S CY C + GHY C +SA+ +CY C G + A
Sbjct: 54 MSSLSRRACYKCGNVGHYAEVC---ASAER-------LCYNCKQPGKPSEAEHNSSGAGT 103
Query: 56 SVTCYNCSGQGHVAKDCTVKSSII--------------------------------CYNC 83
+ CYNC GH+A+ C ++ + CY C
Sbjct: 104 TGRCYNCGMPGHLARACPNPNNGMQGPPRGLGAPRGGFGGGFAPRGGFAGGPRPATCYKC 163
Query: 84 NSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLS 143
HFAR+C + K CYAC + GH ++EC G V TCY CG +GH++
Sbjct: 164 GGPNHFARDCQAQAMK-CYACGRTGHSSRECTSPNGG-----VNKAGKTCYTCGTEGHIA 217
Query: 144 YDC 146
DC
Sbjct: 218 RDC 220
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
++CY C GH C +S + +K G CY C GH AR+C ++ + N +G+G
Sbjct: 178 MKCYACGRTGHSSREC---TSPNGGVNKAGKTCYTCGTEGHIARDCPSKGLN-DNLAGEG 233
>gi|389628260|ref|XP_003711783.1| zinc knuckle domain-containing protein [Magnaporthe oryzae 70-15]
gi|351644115|gb|EHA51976.1| zinc knuckle domain-containing protein [Magnaporthe oryzae 70-15]
Length = 199
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 59/140 (42%), Gaps = 35/140 (25%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV----CYKCNNYGHFARECATESV------- 57
CY C GH CP + G G CYKC GH AR C+
Sbjct: 60 CYRCSQPGHISRDCPSGGAGGGGGGGGGQSSGAECYKCGEVGHIARNCSKGGYGGGGGGG 119
Query: 58 -------------------TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
TCY+C G GH+++DC S CYNC +GHF+R+C S+
Sbjct: 120 YSGGGGGYGGGYGGGAGGKTCYSCGGVGHMSRDCVNGSK--CYNCGETGHFSRDCSKRST 177
Query: 99 ---KRCYACHQAGHMAKECP 115
K CY C Q GH+ ECP
Sbjct: 178 TGEKMCYKCQQPGHVQAECP 197
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND--SSKRCYACHQAGHMAKECP 115
TCY C H A+DC + + CYNC GH +R CP + K CY C Q GH++++CP
Sbjct: 15 TCYTCGQPNHQARDCPNRGAAKCYNCGGEGHISRACPEEPKDQKICYRCSQPGHISRDCP 74
Query: 116 --GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G G CY CG GH++ +C
Sbjct: 75 SGGAGGGGGGGGGQSSGAECYKCGEVGHIARNC 107
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 57/139 (41%), Gaps = 30/139 (21%)
Query: 38 VCYKCNNYGHFARECATE-SVTCYNCSGQGHVAKDC--TVKSSIICYNCNSSGHFARNCP 94
CY C H AR+C + CYNC G+GH+++ C K ICY C+ GH +R+CP
Sbjct: 15 TCYTCGQPNHQARDCPNRGAAKCYNCGGEGHISRACPEEPKDQKICYRCSQPGHISRDCP 74
Query: 95 -------------NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSL---------- 131
S CY C + GH+A+ C G
Sbjct: 75 SGGAGGGGGGGGGQSSGAECYKCGEVGHIARNCSKGGYGGGGGGGYSGGGGGYGGGYGGG 134
Query: 132 ----TCYVCGHQGHLSYDC 146
TCY CG GH+S DC
Sbjct: 135 AGGKTCYSCGGVGHMSRDC 153
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 63/179 (35%), Gaps = 63/179 (35%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE---SVTCYNCSGQ 65
CY C H CP + +A CY C GH +R C E CY CS
Sbjct: 16 CYTCGQPNHQARDCPNRGAAK---------CYNCGGEGHISRACPEEPKDQKICYRCSQP 66
Query: 66 GHVAKDCTVKSSII-------------CYNCNSSGHFARNCPN----------------- 95
GH+++DC + CY C GH ARNC
Sbjct: 67 GHISRDCPSGGAGGGGGGGGGQSSGAECYKCGEVGHIARNCSKGGYGGGGGGGYSGGGGG 126
Query: 96 --------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
K CY+C GHM+++C V+ S CY CG GH S DC
Sbjct: 127 YGGGYGGGAGGKTCYSCGGVGHMSRDC------------VNGS-KCYNCGETGHFSRDC 172
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 14/61 (22%)
Query: 99 KRCYACHQAGHMAKECPGQTAGK-------------SPEPVVDMSLTCYVCGHQGHLSYD 145
+ CY C Q H A++CP + A K PE D + CY C GH+S D
Sbjct: 14 RTCYTCGQPNHQARDCPNRGAAKCYNCGGEGHISRACPEEPKDQKI-CYRCSQPGHISRD 72
Query: 146 C 146
C
Sbjct: 73 C 73
>gi|115461691|ref|NP_001054445.1| Os05g0111000 [Oryza sativa Japonica Group]
gi|52353639|gb|AAU44205.1| unknown protein [Oryza sativa Japonica Group]
gi|113577996|dbj|BAF16359.1| Os05g0111000 [Oryza sativa Japonica Group]
gi|222629944|gb|EEE62076.1| hypothetical protein OsJ_16860 [Oryza sativa Japonica Group]
Length = 951
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 44 NYGHFARECATESVTCYNCSGQGHVAKDCTVKSS--IICYNCNSSGHFARNCPNDSS--K 99
NY A ++E CY C GH A+DC +S+ + C+ C GHF+R+CP S+
Sbjct: 849 NYNSIAGNGSSE---CYKCKQPGHYARDCPGQSTGGLECFKCKQPGHFSRDCPVQSTGGS 905
Query: 100 RCYACHQAGHMAKECPGQTAG 120
C+ C Q GH A++CPGQ+ G
Sbjct: 906 ECFKCKQPGHFARDCPGQSTG 926
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 11/69 (15%)
Query: 80 CYNCNSSGHFARNCPNDSSK--RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCG 137
CY C GH+AR+CP S+ C+ C Q GH +++CP Q+ G S C+ C
Sbjct: 861 CYKCKQPGHYARDCPGQSTGGLECFKCKQPGHFSRDCPVQSTGGS---------ECFKCK 911
Query: 138 HQGHLSYDC 146
GH + DC
Sbjct: 912 QPGHFARDC 920
>gi|326919350|ref|XP_003205944.1| PREDICTED: cellular nucleic acid-binding protein-like [Meleagris
gallopavo]
Length = 134
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 39 CYKCNNYGHFARECA-TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
CY C GH AR+C + CY+C GH+ KDCT + CY C +GH A +C S
Sbjct: 55 CYNCGKPGHLARDCDHADKQKCYSCGEFGHIQKDCT---KVKCYRCGETGHVAISCSKTS 111
Query: 98 SKRCYACHQAGHMAKEC 114
CY C ++GH+A+EC
Sbjct: 112 EVNCYRCGKSGHLAREC 128
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC GH C AD + CY C +GH ++C V CY C GHV
Sbjct: 55 CYNCGKPGHLARDCDH---ADKQ------KCYSCGEFGHIQKDCT--KVKCYRCGETGHV 103
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
A C+ S + CY C SGH AR C +++
Sbjct: 104 AISCSKTSEVNCYRCGKSGHLARECTIEAT 133
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP-------GQTAGKSPEPVVDMSLT 132
CYNC GH AR+C + ++CY+C + GH+ K+C G+T + +
Sbjct: 55 CYNCGKPGHLARDCDHADKQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAISCSKTSEVN 114
Query: 133 CYVCGHQGHLSYDCKL 148
CY CG GHL+ +C +
Sbjct: 115 CYRCGKSGHLARECTI 130
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQG 66
+CY+C +FGH Q C + + CY+C GH A C+ T V CY C G
Sbjct: 75 KCYSCGEFGHIQKDCTK------------VKCYRCGETGHVAISCSKTSEVNCYRCGKSG 122
Query: 67 HVAKDCTVKSS 77
H+A++CT++++
Sbjct: 123 HLARECTIEAT 133
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 9/53 (16%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV 57
+ ++CY C + GH SC + S + CY+C GH AREC E+
Sbjct: 90 TKVKCYRCGETGHVAISCSKTSEVN---------CYRCGKSGHLARECTIEAT 133
>gi|218195961|gb|EEC78388.1| hypothetical protein OsI_18166 [Oryza sativa Indica Group]
Length = 988
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 44 NYGHFARECATESVTCYNCSGQGHVAKDCTVKSS--IICYNCNSSGHFARNCPNDSS--K 99
NY A ++E CY C GH A+DC +S+ + C+ C GHF+R+CP S+
Sbjct: 886 NYNSIAGNGSSE---CYKCKQPGHYARDCPGQSTGGLECFKCKQPGHFSRDCPVQSTGGS 942
Query: 100 RCYACHQAGHMAKECPGQTAG 120
C+ C Q GH A++CPGQ+ G
Sbjct: 943 ECFKCKQPGHFARDCPGQSTG 963
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 11/69 (15%)
Query: 80 CYNCNSSGHFARNCPNDSS--KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCG 137
CY C GH+AR+CP S+ C+ C Q GH +++CP Q+ G S C+ C
Sbjct: 898 CYKCKQPGHYARDCPGQSTGGLECFKCKQPGHFSRDCPVQSTGGS---------ECFKCK 948
Query: 138 HQGHLSYDC 146
GH + DC
Sbjct: 949 QPGHFARDC 957
>gi|240281940|gb|EER45443.1| zinc knuckle transcription factor [Ajellomyces capsulatus H143]
gi|325088081|gb|EGC41391.1| zinc knuckle transcription factor [Ajellomyces capsulatus H88]
Length = 449
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC GH +CP + S KV + C CN GH AR+C + + +C NC
Sbjct: 280 KCVNCGQMGHGSRACPDERSVVE---KVEVKCVNCNGMGHRARDCTEKRIDKFSCRNCGE 336
Query: 65 QGHVAKDCTVK---SSIICYNCNSSGHFARNC--PNDSSK-RCYACHQAGHMAKECPGQT 118
+GH++K+C ++ C NC GH++R+C D +K +C C + GH + CP
Sbjct: 337 EGHISKECDKPHNLDTVTCRNCEEVGHYSRDCTKKKDWTKVQCNNCKEMGHTVRRCPKPV 396
Query: 119 AGKS 122
G++
Sbjct: 397 EGEN 400
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 16/96 (16%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICY------NCNSSGHFARNCPNDSSKR--CYACHQAGHM 110
C NC GH ++ C + S++ NCN GH AR+C + C C + GH+
Sbjct: 281 CVNCGQMGHGSRACPDERSVVEKVEVKCVNCNGMGHRARDCTEKRIDKFSCRNCGEEGHI 340
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+KEC +P ++TC C GH S DC
Sbjct: 341 SKECD--------KPHNLDTVTCRNCEEVGHYSRDC 368
>gi|218185703|gb|EEC68130.1| hypothetical protein OsI_36043 [Oryza sativa Indica Group]
Length = 492
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 75/177 (42%), Gaps = 42/177 (23%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+NC + GH +CP +K C+ C +GH +++C T+ C+ C GH+
Sbjct: 183 CFNCGEEGHVAVNCPM--------EKRKRPCFVCGLFGHNSKQC-TQGQDCFICKKGGHI 233
Query: 69 AKDCTVK------SSIICYNCNSSGHFARNCPNDSSK------RCYACHQAGHM------ 110
AKDC K S C C SGH C ND + +CY C+Q GH+
Sbjct: 234 AKDCPEKHNRNTQQSTFCLRCGESGHDMFGCANDYPRDDVKEIKCYVCNQKGHLCCADFS 293
Query: 111 ---AKEC-------PGQT----AGKSPEPVVDMSLT-CYVCGHQGHLSYDCKLVQKS 152
KE PG T A + E + T CY CG +GH + C KS
Sbjct: 294 DICPKEVSCYNCAQPGHTGLGCAKQRREVSTAATPTLCYKCGEEGHFARGCTKNTKS 350
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 37 IVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTV-KSSIICYNCNSSGHFARNCPN 95
IV K + T TC+NC +GHVA +C + K C+ C GH ++ C
Sbjct: 161 IVLRKLLRIPRYFDPGETLLETCFNCGEEGHVAVNCPMEKRKRPCFVCGLFGHNSKQC-- 218
Query: 96 DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ C+ C + GH+AK+CP + + S C CG GH + C
Sbjct: 219 TQGQDCFICKKGGHIAKDCPEKHNRNT-----QQSTFCLRCGESGHDMFGC 264
>gi|226495087|ref|NP_001142114.1| hypothetical protein [Zea mays]
gi|194707178|gb|ACF87673.1| unknown [Zea mays]
gi|414591597|tpg|DAA42168.1| TPA: hypothetical protein ZEAMMB73_148737 [Zea mays]
Length = 482
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 69/166 (41%), Gaps = 34/166 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+NC + GH +CP K C+ C +GH A++C + C+ C GH+
Sbjct: 177 CFNCSEEGHVAANCPM--------GKRKKPCFVCGLFGHNAKQC-KQGQDCFICKKGGHM 227
Query: 69 AKDCTVK------SSIICYNCNSSGHFARNCPND------SSKRCYACHQAGH------- 109
AKDC K S +C C +GH C ND RCYAC+Q GH
Sbjct: 228 AKDCPDKHKRNDHQSTLCIRCGETGHDMFGCANDYPPDDIEQIRCYACNQKGHLCCSDFF 287
Query: 110 ---MAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
+ + C Q S V C+ CG +GH + C KS
Sbjct: 288 DNSLEQGCAKQRREAS---AVTTPTLCFKCGEEGHFARGCTKNAKS 330
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 58 TCYNCSGQGHVAKDCTV-KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
TC+NCS +GHVA +C + K C+ C GH A+ C + C+ C + GHMAK+CP
Sbjct: 176 TCFNCSEEGHVAANCPMGKRKKPCFVCGLFGHNAKQC--KQGQDCFICKKGGHMAKDCPD 233
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ S C CG GH + C
Sbjct: 234 KHKRND-----HQSTLCIRCGETGHDMFGC 258
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 52/140 (37%), Gaps = 28/140 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-------ESVTCYN 61
C+ C GH CP K R D +C +C GH CA E + CY
Sbjct: 218 CFICKKGGHMAKDCPDKHK---RNDHQSTLCIRCGETGHDMFGCANDYPPDDIEQIRCYA 274
Query: 62 CSGQGHV------------------AKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYA 103
C+ +GH+ + V + +C+ C GHFAR C ++
Sbjct: 275 CNQKGHLCCSDFFDNSLEQGCAKQRREASAVTTPTLCFKCGEEGHFARGCTKNAKSDGPK 334
Query: 104 CHQAGHMAKECPGQTAGKSP 123
+ H ++ + GKSP
Sbjct: 335 GWSSPHSQRKGRWKNDGKSP 354
>gi|389746630|gb|EIM87809.1| hypothetical protein STEHIDRAFT_24788, partial [Stereum hirsutum
FP-91666 SS1]
Length = 174
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 25/133 (18%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPN 95
C+KC N GH A C++E CYNC GH + C SS CY+C GH CP+
Sbjct: 5 CFKCGNLGHIAENCSSEQRLCYNCRQPGHESSACPSPRTVSSKQCYSCGGVGHIQAECPS 64
Query: 96 ----DSSKRCYACHQAGHMAKECPGQT------------AGKSPEPVVDMS------LTC 133
+++CY C + GH+A+ CPG A ++P P ++ + C
Sbjct: 65 LRVQGGNQKCYNCGRFGHIARVCPGGAGLPGGLGGAMGFATRAPPPGRGLNTSALPPVKC 124
Query: 134 YVCGHQGHLSYDC 146
Y CG H++ DC
Sbjct: 125 YRCGGPNHMARDC 137
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 62/160 (38%), Gaps = 26/160 (16%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----- 57
S+ CYNC GH +CP + ++ CY C GH EC + V
Sbjct: 19 SSEQRLCYNCRQPGHESSACPSPRTVSSK------QCYSCGGVGHIQAECPSLRVQGGNQ 72
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP-----NDSSK---RCYACHQAGH 109
CYNC GH+A+ C + + + G R P N S+ +CY C H
Sbjct: 73 KCYNCGRFGHIARVCPGGAGLPGGLGGAMGFATRAPPPGRGLNTSALPPVKCYRCGGPNH 132
Query: 110 MAKECPGQTA-------GKSPEPVVDMSLTCYVCGHQGHL 142
MA++C G S TCY C +GH+
Sbjct: 133 MARDCLAAAGTDGAAINGGGAGGGFTKSKTCYKCQQEGHV 172
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 48/140 (34%), Gaps = 38/140 (27%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC---------- 52
+ S+ QCY+C GH Q CP R CY C +GH AR C
Sbjct: 43 TVSSKQCYSCGGVGHIQAECP-----SLRVQGGNQKCYNCGRFGHIARVCPGGAGLPGGL 97
Query: 53 --------------------ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARN 92
A V CY C G H+A+DC + + +
Sbjct: 98 GGAMGFATRAPPPGRGLNTSALPPVKCYRCGGPNHMARDCLAAAGT---DGAAINGGGAG 154
Query: 93 CPNDSSKRCYACHQAGHMAK 112
SK CY C Q GH+ +
Sbjct: 155 GGFTKSKTCYKCQQEGHVCR 174
>gi|343417616|emb|CCD19979.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 278
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 30/144 (20%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQ 65
+++C+ C GH CPQ C+ C+++GH ++ C ++ V C++CS
Sbjct: 75 SVECFQCHQKGHMMPMCPQTR------------CFNCDHFGHSSQLCGSKEV-CFHCSMP 121
Query: 66 GHVAKDCTVKS-SIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPE 124
H + +C K +CY C GH CP +C+ C+Q H+ +CP
Sbjct: 122 WHTSTECPRKDMGRLCYRCKEPGHDEAKCPQIP--QCHMCNQTAHLVAQCP--------- 170
Query: 125 PVVDMSLTCYVCGHQGHLSYDCKL 148
+ C C +GH++ CK+
Sbjct: 171 -----EVLCNRCHQKGHMAIACKM 189
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 47/114 (41%), Gaps = 25/114 (21%)
Query: 42 CNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI--------ICYNCNSSGHFARNC 93
C + GH R+C + CS QGH +DCT + IC +C SS C
Sbjct: 12 CFSSGHLRRDCPL--IKYAACSRQGHFKEDCTHRRRRARADNDIGICRSCGSSNRAQAKC 69
Query: 94 P-NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
P S C+ CHQ GHM CP QT C+ C H GH S C
Sbjct: 70 PERKKSVECFQCHQKGHMMPMCP-QT-------------RCFNCDHFGHSSQLC 109
>gi|281208685|gb|EFA82861.1| hypothetical protein PPL_04556 [Polysphondylium pallidum PN500]
Length = 615
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 67/171 (39%), Gaps = 65/171 (38%)
Query: 9 CYNCFDFGHYQYSCPQ-------------KSSADARGDKVGIVCYKCNNYGHFARECATE 55
C+ C GH CP+ +SS G+ C+KCN GH +R+C
Sbjct: 34 CFKCNQTGHISRDCPEASSSSSSRAGGNDRSSGGGAGNDRA--CFKCNQTGHISRDCPEA 91
Query: 56 S------------------------------VTCYNCSGQGHVAKDCTVKSSII------ 79
S C+ C+ GH+++DC SS I
Sbjct: 92 SSGGYKNNNNNNNQYNGGNRGNQKGGSTGHDRACFKCNQTGHISRDCPEASSSISSRAGG 151
Query: 80 ----CYNCNSSGHFARNCPND----------SSKRCYACHQAGHMAKECPG 116
CY CN +GH +R+CP + + C+ C+Q GH++++CPG
Sbjct: 152 NDRSCYKCNQTGHISRDCPESSSSISSRAGGNDRNCFKCNQPGHISRDCPG 202
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 74/193 (38%), Gaps = 67/193 (34%)
Query: 20 YSCPQKSSADARGDKVG------IVCYKCNNYGHFAREC--------------------- 52
+ +K + RG++ G C+KCN GH +R+C
Sbjct: 9 FRIDKKGNRGPRGNQKGGGTGHDRACFKCNQTGHISRDCPEASSSSSSRAGGNDRSSGGG 68
Query: 53 ATESVTCYNCSGQGHVAKDCTVKSSII-----------------------------CYNC 83
A C+ C+ GH+++DC SS C+ C
Sbjct: 69 AGNDRACFKCNQTGHISRDCPEASSGGYKNNNNNNNQYNGGNRGNQKGGSTGHDRACFKC 128
Query: 84 NSSGHFARNCPNDSS----------KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTC 133
N +GH +R+CP SS + CY C+Q GH++++CP +++ C
Sbjct: 129 NQTGHISRDCPEASSSISSRAGGNDRSCYKCNQTGHISRDCP-ESSSSISSRAGGNDRNC 187
Query: 134 YVCGHQGHLSYDC 146
+ C GH+S DC
Sbjct: 188 FKCNQPGHISRDC 200
>gi|321478325|gb|EFX89282.1| hypothetical protein DAPPUDRAFT_94765 [Daphnia pulex]
Length = 140
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 55/127 (43%), Gaps = 44/127 (34%)
Query: 38 VCYKCNNYGHFARECA----------TESVTCYNCSGQGHVAKDCTVKS----------- 76
VCYKCN GHFAREC+ S +CYNC GH++++C
Sbjct: 5 VCYKCNETGHFARECSQGGGGGGGYGGGSKSCYNCGKSGHISRECDAPDNRGSGGGGRGG 64
Query: 77 ----------SIICYNCNSSGHFARNCPN-------------DSSKRCYACHQAGHMAKE 113
S CY+C SGH +R+CP+ ++CY C GH++++
Sbjct: 65 GGGGGGYGGQSRDCYSCGKSGHISRDCPDGGSGGRGGGGGYGGGDRKCYGCGNVGHISRD 124
Query: 114 CPGQTAG 120
CP G
Sbjct: 125 CPNNRGG 131
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 76 SSIICYNCNSSGHFARNCPN---------DSSKRCYACHQAGHMAKECPG---------- 116
SS +CY CN +GHFAR C SK CY C ++GH+++EC
Sbjct: 2 SSSVCYKCNETGHFARECSQGGGGGGGYGGGSKSCYNCGKSGHISRECDAPDNRGSGGGG 61
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ G S CY CG GH+S DC
Sbjct: 62 RGGGGGGGGYGGQSRDCYSCGKSGHISRDC 91
>gi|297741972|emb|CBI33417.3| unnamed protein product [Vitis vinifera]
Length = 398
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
+C KC GHF+R+C + C NC GH+A +C S+ IC+NC SGH A PND
Sbjct: 246 LCNKCKRPGHFSRDCPNVT-RCNNCGLPGHIAAECN--STTICWNCKESGHLASQFPNDP 302
Query: 98 SKRCYACHQAGHMAKEC 114
C+ C + GH+A++C
Sbjct: 303 V--CHMCGKMGHLAQDC 317
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 20/84 (23%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC-----------PGQTAGKSP 123
+ +C C GHF+R+CPN + RC C GH+A EC G A + P
Sbjct: 242 RQDYLCNKCKRPGHFSRDCPNVT--RCNNCGLPGHIAAECNSTTICWNCKESGHLASQFP 299
Query: 124 -EPVVDMSLTCYVCGHQGHLSYDC 146
+PV C++CG GHL+ DC
Sbjct: 300 NDPV------CHMCGKMGHLAQDC 317
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 14/111 (12%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGI--------VCYKCNNYGHFAREC 52
+ S C C GH+ CP + + G I +C+ C GH A +
Sbjct: 239 LISRQDYLCNKCKRPGHFSRDCPNVTRCNNCGLPGHIAAECNSTTICWNCKESGHLASQF 298
Query: 53 ATESVTCYNCSGQGHVAKDCT-----VKSSIICYNCNSSGHFARNCPNDSS 98
+ V C+ C GH+A+DC+ + +C NC GH A NC N+ +
Sbjct: 299 PNDPV-CHMCGKMGHLAQDCSCLGLPAHDARLCNNCYKPGHIATNCTNEKA 348
>gi|343420304|emb|CCD19151.1| hypothetical protein, conserved in T. vivax [Trypanosoma vivax
Y486]
Length = 605
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 30/144 (20%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQ 65
+++C+ C GH CPQ C+ C ++G+ + C + V C++CS
Sbjct: 75 SVECFQCHQKGHMMPMCPQTR------------CFNCGHFGYGSELCTNKPV-CFHCSMP 121
Query: 66 GHVAKDCTVKS-SIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPE 124
GH + +C V + Y+C GH CP S +CY C+Q GH+ +CP
Sbjct: 122 GHTSTECLVNGMGRLRYSCEEPGHDMAKCPQ--SPQCYMCNQTGHLVAQCP--------- 170
Query: 125 PVVDMSLTCYVCGHQGHLSYDCKL 148
+ C C +GH++ CK+
Sbjct: 171 -----EVLCNRCHQKGHMASACKM 189
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 56/148 (37%), Gaps = 41/148 (27%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
M + S C NCF GH + CP I C C+ GHF +C
Sbjct: 1 MKNISPDTCKNCFSTGHLRRDCPL------------IKCAACSRLGHFKEDCP------- 41
Query: 61 NCSGQGHVAKDCTVKSSI-ICYNCNSSGHFARNCPND-SSKRCYACHQAGHMAKECPGQT 118
H K S I IC +C SS H CP S C+ CHQ GHM CP QT
Sbjct: 42 ------HRRKRPRADSDIGICRSCGSSSHAQAKCPERIKSVECFQCHQKGHMMPMCP-QT 94
Query: 119 AGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C+ CGH G+ S C
Sbjct: 95 -------------RCFNCGHFGYGSELC 109
>gi|357134970|ref|XP_003569087.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Brachypodium distachyon]
Length = 945
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 19/108 (17%)
Query: 30 ARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHF 89
A G+ +C+KCN GHF+R+C + + N + + SS +C+ CN GH+
Sbjct: 824 AGGNASSGLCFKCNQPGHFSRDCPGLTTSYGNSAVNANA-------SSNLCFKCNQPGHY 876
Query: 90 ARNCP------------NDSSKRCYACHQAGHMAKECPGQTAGKSPEP 125
+R+CP N + C+ C+Q GH A++CP Q AG P
Sbjct: 877 SRDCPAQGSSYPSSAGGNSGANLCFKCNQPGHYARDCPAQAAGAPQHP 924
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 45/164 (27%)
Query: 15 FGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE-------------SVTCYN 61
FG Q S + +R + C C + GH A+ C + + Y
Sbjct: 763 FGQ-QASLSARVPTTSRATRYAQTCSVCGSNGHNAQNCPATMDDMHQPAPSVGFTASSYG 821
Query: 62 CSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP-------------NDSSKRCYACHQAG 108
S G+ SS +C+ CN GHF+R+CP N SS C+ C+Q G
Sbjct: 822 SSAGGNA-------SSGLCFKCNQPGHFSRDCPGLTTSYGNSAVNANASSNLCFKCNQPG 874
Query: 109 HMAKECPGQ------TAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
H +++CP Q +AG + + C+ C GH + DC
Sbjct: 875 HYSRDCPAQGSSYPSSAGGN-----SGANLCFKCNQPGHYARDC 913
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 9 CYNCFDFGHYQYSCPQKSS---ADARGDKVGIVCYKCNNYGHFARECATES 56
C+ C GHY CP + S + A G+ +C+KCN GH+AR+C ++
Sbjct: 867 CFKCNQPGHYSRDCPAQGSSYPSSAGGNSGANLCFKCNQPGHYARDCPAQA 917
>gi|407399797|gb|EKF28436.1| hypothetical protein MOQ_007815 [Trypanosoma cruzi marinkellei]
Length = 509
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 17/152 (11%)
Query: 7 IQCYNCFDFGHYQYSCP-QKSSADARGDKVGIVCYKCNNYGHFARECA--TESVTCYNCS 63
+ C C GH++ CP + A A D VC C + H C ++SV C+ C
Sbjct: 43 VTCRACGRLGHFKEDCPSENKRARAEEDGEVSVCRSCGSSRHVKASCPLRSQSVECFQCH 102
Query: 64 GQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKS- 122
+GH+A C + C+NC S GH ++ C S C+ C AGH + +CP + G+
Sbjct: 103 QRGHMAPTCPLTR---CFNCGSYGHSSQLC--YSRPLCFHCSLAGHRSTDCPMKPKGRVC 157
Query: 123 ---PEPVVDM-----SLTCYVCGHQGHLSYDC 146
EP +M + C++C GHL C
Sbjct: 158 YRCKEPGHEMAECTQTALCHMCNQAGHLIAQC 189
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 16/113 (14%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCS 63
+ +++C+ C GH +CP C+ C +YGH ++ C + + C++CS
Sbjct: 93 SQSVECFQCHQRGHMAPTCPLTR------------CFNCGSYGHSSQLCYSRPL-CFHCS 139
Query: 64 GQGHVAKDCTVKSS-IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
GH + DC +K +CY C GH C + C+ C+QAGH+ +CP
Sbjct: 140 LAGHRSTDCPMKPKGRVCYRCKEPGHEMAECTQTAL--CHMCNQAGHLIAQCP 190
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 58/133 (43%), Gaps = 20/133 (15%)
Query: 36 GIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI----------ICYNCNS 85
GI C C+ H R+C VTC C GH +DC ++ +C +C S
Sbjct: 24 GITCSNCSATDHLRRDCPL--VTCRACGRLGHFKEDCPSENKRARAEEDGEVSVCRSCGS 81
Query: 86 SGHFARNCPNDS-SKRCYACHQAGHMAKECPGQ------TAGKSPEPVVDMSLTCYVCGH 138
S H +CP S S C+ CHQ GHMA CP + G S + L C+ C
Sbjct: 82 SRHVKASCPLRSQSVECFQCHQRGHMAPTCPLTRCFNCGSYGHSSQLCYSRPL-CFHCSL 140
Query: 139 QGHLSYDCKLVQK 151
GH S DC + K
Sbjct: 141 AGHRSTDCPMKPK 153
>gi|326513858|dbj|BAJ87947.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 10/84 (11%)
Query: 38 VCYKCNNYGHFARECAT------ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFAR 91
+C C GH A++C E C NC GH+A +CT + + C NC SGH AR
Sbjct: 10 ICRNCGKSGHIAKDCTAPPMLPGEVKLCNNCYKPGHIAVECTNEKA--CNNCRKSGHLAR 67
Query: 92 NCPNDSSKRCYACHQAGHMAKECP 115
NC ND C CH AGH+A++CP
Sbjct: 68 NCTNDPV--CNLCHVAGHLARQCP 89
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 37 IVCYKCNNYGHFARECATES-VTCYNCSGQGHVAKDCT 73
+VC CN GH +R+C + + C NC G+GH+A +C
Sbjct: 153 MVCRACNQVGHMSRDCMGGAFMICNNCGGRGHMAYECP 190
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
+ C C+ GH+++DC + +IC NC GH A CP
Sbjct: 152 DMVCRACNQVGHMSRDCMGGAFMICNNCGGRGHMAYECP 190
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 37/99 (37%), Gaps = 30/99 (30%)
Query: 48 FARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQA 107
A C E + C NC GH+AKDCT + K C C++
Sbjct: 1 MANACPNEGI-CRNCGKSGHIAKDCTAPPMLP----------------GEVKLCNNCYKP 43
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GH+A EC + A C C GHL+ +C
Sbjct: 44 GHIAVECTNEKA-------------CNNCRKSGHLARNC 69
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
S ++C CN GH +R+C + C C GHMA ECP
Sbjct: 151 SDMVCRACNQVGHMSRDCMGGAFMICNNCGGRGHMAYECP 190
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 58/184 (31%), Gaps = 61/184 (33%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
M C NC+ GH C + + C C GH AR C + V C
Sbjct: 29 MLPGEVKLCNNCYKPGHIAVECTNEKA-----------CNNCRKSGHLARNCTNDPV-CN 76
Query: 61 NCSGQGHVAK---------------------------DCTVKSSIICYNCNSSGHFARNC 93
C GH+A+ D + + + +
Sbjct: 77 LCHVAGHLARQCPKSDEINERGGPPPFRGGDALFRGGDALFRGGDALFRGGDALFRGGDA 136
Query: 94 PND-----------SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHL 142
P S C AC+Q GHM+++C G + C CG +GH+
Sbjct: 137 PFRGGGGALFRGGYSDMVCRACNQVGHMSRDCMGGA-----------FMICNNCGGRGHM 185
Query: 143 SYDC 146
+Y+C
Sbjct: 186 AYEC 189
>gi|443735051|gb|ELU18906.1| hypothetical protein CAPTEDRAFT_180220 [Capitella teleta]
Length = 651
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 48/106 (45%), Gaps = 18/106 (16%)
Query: 39 CYKCNNYGHFARECAT----ESVTCYNCSGQGHVAKDC-----TVKSSIICYNCNSSGHF 89
CYKC GHFAREC + C+ C +GH A++C C+ C GHF
Sbjct: 50 CYKCGEDGHFARECPSAGGGGGGGCHKCGEEGHFARECPKAGGGGGGGRGCHKCGEEGHF 109
Query: 90 ARNCPN------DSSKRCYACHQAGHMAKECP---GQTAGKSPEPV 126
AR CP+ C C + GH A+ECP G G+ P +
Sbjct: 110 ARECPSAGSSGGGGGSGCRKCGEEGHFARECPNSEGGGGGEKPREI 155
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 40/99 (40%), Gaps = 18/99 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA------TESVTCYNC 62
CY C + GH+ CP C+KC GHFAREC C+ C
Sbjct: 50 CYKCGEDGHFARECPSAGGGGGG------GCHKCGEEGHFARECPKAGGGGGGGRGCHKC 103
Query: 63 SGQGHVAKDC------TVKSSIICYNCNSSGHFARNCPN 95
+GH A++C C C GHFAR CPN
Sbjct: 104 GEEGHFARECPSAGSSGGGGGSGCRKCGEEGHFARECPN 142
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 80 CYNCNSSGHFARNCPN---DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVC 136
CY C GHFAR CP+ C+ C + GH A+ECP G C+ C
Sbjct: 50 CYKCGEDGHFARECPSAGGGGGGGCHKCGEEGHFARECPKAGGGGG------GGRGCHKC 103
Query: 137 GHQGHLSYDC 146
G +GH + +C
Sbjct: 104 GEEGHFAREC 113
>gi|255586301|ref|XP_002533802.1| cellular nucleic acid binding protein, putative [Ricinus communis]
gi|223526275|gb|EEF28589.1| cellular nucleic acid binding protein, putative [Ricinus communis]
Length = 266
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 49/110 (44%), Gaps = 21/110 (19%)
Query: 9 CYNCFDFGHYQYSCP--QKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
C+ C + GH+ C ++ + G C+ C YGH AR+CA CYNC G G
Sbjct: 157 CFKCGNTGHFARDCTTRGNNNNNNGGGDRDRGCFNCGGYGHLARDCAGGGGACYNCGGFG 216
Query: 67 HVAKDCT-------------------VKSSIICYNCNSSGHFARNCPNDS 97
H+A+DCT C+NC GHFAR CPN S
Sbjct: 217 HLARDCTSARGASGGGAGGGRFGGKGGSGGGGCFNCGEEGHFARECPNKS 266
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 49/111 (44%), Gaps = 32/111 (28%)
Query: 39 CYKCNNYGHFARECATESVT------------CYNCSGQGHVAKDCTVKSSIICYNCNSS 86
C+KC N GHFAR+C T C+NC G GH+A+DC CYNC
Sbjct: 157 CFKCGNTGHFARDCTTRGNNNNNNGGGDRDRGCFNCGGYGHLARDC-AGGGGACYNCGGF 215
Query: 87 GHFARNCPNDSSKR-------------------CYACHQAGHMAKECPGQT 118
GH AR+C + C+ C + GH A+ECP ++
Sbjct: 216 GHLARDCTSARGASGGGAGGGRFGGKGGSGGGGCFNCGEEGHFARECPNKS 266
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 49/125 (39%), Gaps = 26/125 (20%)
Query: 47 HFAREC------ATESVTCYNCSGQGHVAKDCTV-----------KSSIICYNCNSSGHF 89
H AREC + C+ C GH A+DCT C+NC GH
Sbjct: 139 HIARECNNNNNSNSNGGGCFKCGNTGHFARDCTTRGNNNNNNGGGDRDRGCFNCGGYGHL 198
Query: 90 ARNCPNDSSKRCYACHQAGHMAKECP--------GQTAGKSPEPVVDMSLTCYVCGHQGH 141
AR+C CY C GH+A++C G G+ C+ CG +GH
Sbjct: 199 ARDCAGGGGA-CYNCGGFGHLARDCTSARGASGGGAGGGRFGGKGGSGGGGCFNCGEEGH 257
Query: 142 LSYDC 146
+ +C
Sbjct: 258 FAREC 262
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 28/98 (28%)
Query: 65 QGHVAKDC-----TVKSSIICYNCNSSGHFARNCPN-----------DSSKRCYACHQAG 108
GH+A++C + + C+ C ++GHFAR+C D + C+ C G
Sbjct: 137 SGHIARECNNNNNSNSNGGGCFKCGNTGHFARDCTTRGNNNNNNGGGDRDRGCFNCGGYG 196
Query: 109 HMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
H+A++C G CY CG GHL+ DC
Sbjct: 197 HLARDCAGGGG------------ACYNCGGFGHLARDC 222
>gi|412986462|emb|CCO14888.1| predicted protein [Bathycoccus prasinos]
Length = 206
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 63/143 (44%), Gaps = 33/143 (23%)
Query: 24 QKSSADARGDKVGIVCYKCNNYGHFAREC----------ATESVTCYNCSGQGHVAKDCT 73
+ ++AD K +VC+ C GH R+C + CYNC H +DCT
Sbjct: 44 KPAAADGGIFKNKLVCFGCRRTGHSLRDCRYHNGGDANSSRGQKICYNCGSSEHALRDCT 103
Query: 74 VKSSII----CYNCNSSGHFARNCPNDSS------KRCYACHQAGHMAKECPGQTAGKSP 123
+S C+ C+ GH +RNCP + S +C C H+A++CP Q A
Sbjct: 104 EPNSNFAFAKCFVCDKVGHLSRNCPENKSGLYVNGGQCRICKGVDHLARDCPKQGA---- 159
Query: 124 EPVVDMSLTCYVCGHQGHLSYDC 146
C CG +GHLS +C
Sbjct: 160 ---------CLRCGEEGHLSKEC 173
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES-----VTCYN 61
+ C+ C GH C + DA + +CY C + H R+C + C+
Sbjct: 57 LVCFGCRRTGHSLRDCRYHNGGDANSSRGQKICYNCGSSEHALRDCTEPNSNFAFAKCFV 116
Query: 62 CSGQGHVAKDCTVKSSII------CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
C GH++++C S + C C H AR+CP + C C + GH++KECP
Sbjct: 117 CDKVGHLSRNCPENKSGLYVNGGQCRICKGVDHLARDCPKQGA--CLRCGEEGHLSKECP 174
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 14/101 (13%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---- 57
SS CYNC H C + +S A C+ C+ GH +R C
Sbjct: 82 SSRGQKICYNCGSSEHALRDCTEPNSNFAFAK-----CFVCDKVGHLSRNCPENKSGLYV 136
Query: 58 ---TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
C C G H+A+DC + + C C GH ++ CPN
Sbjct: 137 NGGQCRICKGVDHLARDCPKQGA--CLRCGEEGHLSKECPN 175
>gi|296826428|ref|XP_002850974.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238838528|gb|EEQ28190.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 495
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC GH SC ++ S R V + C C GH AR+C V C NC
Sbjct: 267 KCSNCGKMGHIMKSCKEELSVVER---VEVKCVNCKQPGHRARDCKEARVDRFACRNCGK 323
Query: 65 QGHVAKDCTVKSS---IICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKEC 114
GH + +C S + C CN GHFA++CP R C C H+AK+C
Sbjct: 324 GGHRSTECPEPRSAEGVECKRCNEVGHFAKDCPQGGGSRACRNCGSEDHIAKDC 377
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
Query: 32 GDKVGIVCYKCNNYGHFARECAT---ESVTCYNCSGQGHVAKDCTVKSSI--ICYNCNSS 86
GD G C C GHFAREC + C+NC +GH DC C C
Sbjct: 46 GDANGDTCRNCGQSGHFARECPEPRKPTGACFNCGQEGHNKSDCPNPRVFTGTCRICEKV 105
Query: 87 GHFARNCPNDSSKRCYACHQAGHMAKEC 114
GH A CP C C GH EC
Sbjct: 106 GHPAAECPERPPDICKNCKGEGHKTMEC 133
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSGQ 65
C NC GH+ CP+ C+ C GH +C V TC C
Sbjct: 53 CRNCGQSGHFARECPEPRKPTG-------ACFNCGQEGHNKSDCPNPRVFTGTCRICEKV 105
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNC 93
GH A +C + IC NC GH C
Sbjct: 106 GHPAAECPERPPDICKNCKGEGHKTMEC 133
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 80 CYNCNSSGHFARNCPN--DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCG 137
C NC SGHFAR CP + C+ C Q GH +CP P V + TC +C
Sbjct: 53 CRNCGQSGHFARECPEPRKPTGACFNCGQEGHNKSDCPN--------PRV-FTGTCRICE 103
Query: 138 HQGHLSYDC 146
GH + +C
Sbjct: 104 KVGHPAAEC 112
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 49/126 (38%), Gaps = 14/126 (11%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE----SVT 58
S ++C C + GH+ CPQ + A C C + H A++C +VT
Sbjct: 336 SAEGVECKRCNEVGHFAKDCPQGGGSRA--------CRNCGSEDHIAKDCDQPRNMANVT 387
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQT 118
C NC + V +S S GHF+R+C C GH + CP
Sbjct: 388 CRNCEESEYNPTYMKVPTSGHQLMYISVGHFSRDCTKKKDWSKVKC--MGHTIRRCPLPA 445
Query: 119 AGKSPE 124
G + E
Sbjct: 446 EGANDE 451
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 8/69 (11%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-TCYNCSG 64
T C+NC GH + CP C C GH A EC C NC G
Sbjct: 73 TGACFNCGQEGHNKSDCPNPRVFTG-------TCRICEKVGHPAAECPERPPDICKNCKG 125
Query: 65 QGHVAKDCT 73
+GH +CT
Sbjct: 126 EGHKTMECT 134
>gi|169616304|ref|XP_001801567.1| hypothetical protein SNOG_11322 [Phaeosphaeria nodorum SN15]
gi|160703149|gb|EAT81030.2| hypothetical protein SNOG_11322 [Phaeosphaeria nodorum SN15]
Length = 342
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 59/154 (38%), Gaps = 40/154 (25%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-----------TESV 57
CY C + GH + CP+ S G C+ C GH EC
Sbjct: 132 CYGCGETGHQKRDCPKGGSGG------GQACFNCGEVGHRKTECTQPRKPMGGGGGGSDR 185
Query: 58 TCYNCSGQGHVAKDCTVKSSII-------CYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
C+NC+ GH DCT ++ C+NC GH +R CP RC C + GH
Sbjct: 186 VCFNCNQPGHNKSDCTEPANASGGSGGRECHNCKQVGHMSRECPEPRVFRCRNCDEEGHQ 245
Query: 111 AKECP----------------GQTAGKSPEPVVD 128
++EC G AG+ P P V+
Sbjct: 246 SRECDKPKDWSRVKCRNCEQFGHGAGRCPNPAVE 279
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 62/151 (41%), Gaps = 36/151 (23%)
Query: 17 HYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTCYNCSGQGHVAKDC 72
H + CPQ CY C GH R+C + C+NC GH +C
Sbjct: 114 HQKRDCPQGGGGSG----GDRACYGCGETGHQKRDCPKGGSGGGQACFNCGEVGHRKTEC 169
Query: 73 T----------VKSSIICYNCNSSGHFARNC--PNDSS-----KRCYACHQAGHMAKECP 115
T S +C+NCN GH +C P ++S + C+ C Q GHM++EC
Sbjct: 170 TQPRKPMGGGGGGSDRVCFNCNQPGHNKSDCTEPANASGGSGGRECHNCKQVGHMSREC- 228
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
PEP V C C +GH S +C
Sbjct: 229 -------PEPRV---FRCRNCDEEGHQSREC 249
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 32/88 (36%), Gaps = 26/88 (29%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGH 67
+C+NC GH CP+ C C+ GH +REC
Sbjct: 214 ECHNCKQVGHMSRECPEPRV---------FRCRNCDEEGHQSREC--------------D 250
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPN 95
KD S + C NC GH A CPN
Sbjct: 251 KPKDW---SRVKCRNCEQFGHGAGRCPN 275
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 13/92 (14%)
Query: 65 QGHVAKDC-----TVKSSIICYNCNSSGHFARNCPNDSS---KRCYACHQAGHMAKECPG 116
+ H +DC CY C +GH R+CP S + C+ C + GH EC
Sbjct: 112 EDHQKRDCPQGGGGSGGDRACYGCGETGHQKRDCPKGGSGGGQACFNCGEVGHRKTEC-- 169
Query: 117 QTAGKSP--EPVVDMSLTCYVCGHQGHLSYDC 146
T + P C+ C GH DC
Sbjct: 170 -TQPRKPMGGGGGGSDRVCFNCNQPGHNKSDC 200
>gi|115389724|ref|XP_001212367.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114194763|gb|EAU36463.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 429
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSG 64
++C NC GH CP+ R D Y C GHFA++C A+ TC NC
Sbjct: 281 VKCVNCSATGHRARDCPE-----PRRDP-----YAC--LGHFAKDCPQASAPRTCRNCGS 328
Query: 65 QGHVAKDCTVK---SSIICYNCNSSGHFARNC--PNDSSK-RCYACHQAGHMAKECP 115
+ H+A+DC S++ C NC+ GHF+R+C D SK +C C GH K CP
Sbjct: 329 EDHIARDCDKPRDVSTVTCRNCDEVGHFSRDCTKKKDWSKVQCNNCGGMGHTVKRCP 385
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 41 KCNNYGHFARECAT--ESVTCYNCSGQGHVAKDCTVKSSI--ICYNCNSSGHFARNCPND 96
+C + GHFAREC +++ C+NC +GH DC C CN GH A CP
Sbjct: 77 RCGDEGHFARECPEPRKAMACFNCGEEGHAKVDCPKPRVFKGTCRICNQEGHPAAECPER 136
Query: 97 SSKRCYACHQAGHMAKEC 114
C C GH +C
Sbjct: 137 PPDVCKNCKMEGHKTMDC 154
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 27/114 (23%)
Query: 33 DKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARN 92
D+ C CN GH AR C E + + + C NC+++GH AR+
Sbjct: 250 DRQVPKCPICNEMGHTARGCKEE--------------RPALERVEVKCVNCSATGHRARD 295
Query: 93 CPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CP + + YAC GH AK+CP +A + TC CG + H++ DC
Sbjct: 296 CP-EPRRDPYAC--LGHFAKDCPQASAPR----------TCRNCGSEDHIARDC 336
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
Q C D GH+ CP+ A + C+ C GH +C V TC C+
Sbjct: 74 QVPRCGDEGHFARECPEPRKA--------MACFNCGEEGHAKVDCPKPRVFKGTCRICNQ 125
Query: 65 QGHVAKDCTVKSSIICYNCNSSGHFARNC 93
+GH A +C + +C NC GH +C
Sbjct: 126 EGHPAAECPERPPDVCKNCKMEGHKTMDC 154
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 62 CSGQGHVAKDC-TVKSSIICYNCNSSGHFARNCPNDSSKR--CYACHQAGHMAKECPGQT 118
C +GH A++C + ++ C+NC GH +CP + C C+Q GH A ECP
Sbjct: 78 CGDEGHFARECPEPRKAMACFNCGEEGHAKVDCPKPRVFKGTCRICNQEGHPAAECP--- 134
Query: 119 AGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
+ P V C C +GH + DC +K
Sbjct: 135 --ERPPDV------CKNCKMEGHKTMDCTENRK 159
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 8/78 (10%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-TCYNCSG 64
+ C+NC + GH + CP+ C CN GH A EC C NC
Sbjct: 94 AMACFNCGEEGHAKVDCPKPRVFKG-------TCRICNQEGHPAAECPERPPDVCKNCKM 146
Query: 65 QGHVAKDCTVKSSIICYN 82
+GH DCT N
Sbjct: 147 EGHKTMDCTENRKFDLNN 164
>gi|358337431|dbj|GAA55792.1| cellular nucleic acid-binding protein [Clonorchis sinensis]
Length = 143
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 49/122 (40%), Gaps = 31/122 (25%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGI----------------VCYKCNNYGHFAREC 52
CYNC GH CP S G CY C GH AR+C
Sbjct: 5 CYNCGRSGHMSRDCPSGSRGRGGGGGYRGSRSGGGGGGGGGGGRDACYNCGQPGHMARDC 64
Query: 53 ATESV---------------TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
TCYNC G GH A+DCT + S CYNC SGH AR+CPN+
Sbjct: 65 VNGRGYGGGYGGGGYGGGRDTCYNCGGSGHFARDCTAQRSGGCYNCGESGHMARSCPNNR 124
Query: 98 SK 99
S
Sbjct: 125 SN 126
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 47/130 (36%), Gaps = 50/130 (38%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSI-------------------------ICYNCNSSGHFA 90
S +CYNC GH+++DC S CYNC GH A
Sbjct: 2 SDSCYNCGRSGHMSRDCPSGSRGRGGGGGYRGSRSGGGGGGGGGGGRDACYNCGQPGHMA 61
Query: 91 RNCPNDSS--------------KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVC 136
R+C N CY C +GH A++C Q +G CY C
Sbjct: 62 RDCVNGRGYGGGYGGGGYGGGRDTCYNCGGSGHFARDCTAQRSGG-----------CYNC 110
Query: 137 GHQGHLSYDC 146
G GH++ C
Sbjct: 111 GESGHMARSC 120
>gi|51105076|gb|AAT97098.1| putative zinc finger protein, partial [Lymnaea stagnalis]
Length = 173
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 53/108 (49%), Gaps = 16/108 (14%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CY C GH C +AR CY C + GH AR+C E C+ C G GH+
Sbjct: 28 CYRCHRAGHIARYC-----TNARR------CYICYSTGHLARDCYNER-RCFRCYGSGHL 75
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
A+DC + +C++C GH A C RCY CHQ GH+ + CP
Sbjct: 76 ARDC--ERPRVCFSCLRPGHTAVRCQFQG--RCYKCHQKGHVVRNCPA 119
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 18/115 (15%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
+CY+C+ GH AR C T + CY C GH+A+DC + C+ C SGH AR+C +
Sbjct: 27 LCYRCHRAGHIARYC-TNARRCYICYSTGHLARDCYNERR--CFRCYGSGHLARDC--ER 81
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
+ C++C + GH A C Q G+ CY C +GH+ +C V+ +
Sbjct: 82 PRVCFSCLRPGHTAVRC--QFQGR-----------CYKCHQKGHVVRNCPAVRDT 123
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 18/81 (22%)
Query: 67 HVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPV 126
H K C + +CY C+ +GH AR C N ++RCY C+ GH+A++C +
Sbjct: 18 HQVKQC---DAPLCYRCHRAGHIARYCTN--ARRCYICYSTGHLARDCYNER-------- 64
Query: 127 VDMSLTCYVCGHQGHLSYDCK 147
C+ C GHL+ DC+
Sbjct: 65 -----RCFRCYGSGHLARDCE 80
>gi|328865796|gb|EGG14182.1| hypothetical protein DFA_11951 [Dictyostelium fasciculatum]
Length = 130
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 58/124 (46%), Gaps = 20/124 (16%)
Query: 37 IVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSS------------IICYNCN 84
I+CYKC GH A C E+V C C GH ++C K + CY+C
Sbjct: 6 ILCYKCKKPGHKAAGCTDEAV-CNFCKQPGHFFRECPEKPEGTVAQPSSGPKEVRCYSCQ 64
Query: 85 SSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSY 144
GH ++NC +KRC+ C GH++ CP + G + S C+ CG GH+S
Sbjct: 65 QPGHVSKNC--SRAKRCFNCGGVGHISSTCPSEVTGSKFD-----SRKCFHCGKFGHISK 117
Query: 145 DCKL 148
C +
Sbjct: 118 ACPM 121
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVV-DMSLTC 133
+ I+CY C GH A C +++ C C Q GH +ECP + G +P + C
Sbjct: 3 EKEILCYKCKKPGHKAAGCTDEAV--CNFCKQPGHFFRECPEKPEGTVAQPSSGPKEVRC 60
Query: 134 YVCGHQGHLSYDCKLVQK 151
Y C GH+S +C ++
Sbjct: 61 YSCQQPGHVSKNCSRAKR 78
>gi|225555534|gb|EEH03826.1| zinc knuckle domain-containing protein [Ajellomyces capsulatus
G186AR]
Length = 184
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 59/143 (41%), Gaps = 38/143 (26%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV----------CYKCNNYGHFARECA----- 53
CY C GH C S D+ G+ G CYKC GH AR C+
Sbjct: 43 CYRCGQAGHISRDCTSAGSGDSYGNSGGYSGGGGAAGGQECYKCGQVGHIARNCSQSGGY 102
Query: 54 -------------------TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
TCY+C G GH+A+DCT CYNC GH +R+CP
Sbjct: 103 GSGGYGGATGGGYSGGYGGGRQQTCYSCGGYGHMARDCTQGQK--CYNCGEVGHVSRDCP 160
Query: 95 NDS--SKRCYACHQAGHMAKECP 115
++ + CY C Q GH+ CP
Sbjct: 161 TEAKGERVCYKCKQPGHVQATCP 183
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDC--TVKSSIICYNCNSSGHFARNCPN 95
CY C YGH AR+C T+ CYNC GHV++DC K +CY C GH CPN
Sbjct: 126 TCYSCGGYGHMARDC-TQGQKCYNCGEVGHVSRDCPTEAKGERVCYKCKQPGHVQATCPN 184
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 69/187 (36%), Gaps = 63/187 (33%)
Query: 9 CYNCFDFGHY------QYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----- 57
C+NC D H Y+C + A +K CY+C GH +R+C +
Sbjct: 10 CFNCGDAAHQVNMFCALYNCGGRECTAAPKEKT---CYRCGQAGHISRDCTSAGSGDSYG 66
Query: 58 ---------------TCYNCSGQGHVAKDCT-----------------------VKSSII 79
CY C GH+A++C+
Sbjct: 67 NSGGYSGGGGAAGGQECYKCGQVGHIARNCSQSGGYGSGGYGGATGGGYSGGYGGGRQQT 126
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
CY+C GH AR+C ++CY C + GH++++CP + G+ CY C
Sbjct: 127 CYSCGGYGHMARDCTQ--GQKCYNCGEVGHVSRDCPTEAKGER---------VCYKCKQP 175
Query: 140 GHLSYDC 146
GH+ C
Sbjct: 176 GHVQATC 182
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 51/134 (38%), Gaps = 16/134 (11%)
Query: 32 GDKVGIVCYKCNNYGHFAREC--ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHF 89
GD V C Y REC A + TCY C GH+++DCT S Y +
Sbjct: 14 GDAAHQVNMFCALYNCGGRECTAAPKEKTCYRCGQAGHISRDCTSAGSGDSYGNSGGYSG 73
Query: 90 ARNCPNDSSKRCYACHQAGHMAKECP------------GQTAGKSPEPVVDMSLTCYVCG 137
+ CY C Q GH+A+ C G S TCY CG
Sbjct: 74 GGG--AAGGQECYKCGQVGHIARNCSQSGGYGSGGYGGATGGGYSGGYGGGRQQTCYSCG 131
Query: 138 HQGHLSYDCKLVQK 151
GH++ DC QK
Sbjct: 132 GYGHMARDCTQGQK 145
>gi|340507460|gb|EGR33421.1| universal minicircle sequence binding protein, putative
[Ichthyophthirius multifiliis]
Length = 724
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 73/184 (39%), Gaps = 43/184 (23%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQ 65
+IQCY C GH CP AR + C+ C GH + +C TE C C Q
Sbjct: 352 SIQCYKCQQEGHMAKDCPNAQQYQAR----VMKCFLCKKEGHKSNDC-TEPPLCMKCKEQ 406
Query: 66 GHVAKDCTVKSSI---ICYNCNSSGHFARNCP----------NDSSK------------- 99
GH +KDC + +C+NC GH + CP ND++
Sbjct: 407 GHQSKDCQNPDHMNKRVCFNCGDEGHPTKGCPQNQQNSFRNNNDTNSTYQKPGGFQQREK 466
Query: 100 -RCYACHQAGHMAKECPG--------QTAGKSPE---PVVDMSLTCYVCGHQGHLSYDCK 147
+C+ C + GH A +C Q S E P C+ CG + H S DC
Sbjct: 467 PKCFKCQKEGHRAIDCTELPYCFKCLQNIHSSKECDHPENSKKRVCFNCGDEKHCSKDCP 526
Query: 148 LVQK 151
VQ+
Sbjct: 527 KVQQ 530
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 59 CYNCSGQGHVAKDCT-----VKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHM 110
C+ C +GH+++DC+ K + C+NC H ++ CPN R CY C Q GHM
Sbjct: 305 CFKCGEEGHMSRDCSNGNSREKKNNSCFNCGEITHMSKECPNPKKPRSIQCYKCQQEGHM 364
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
AK+CP + + + C++C +GH S DC
Sbjct: 365 AKDCP------NAQQYQARVMKCFLCKKEGHKSNDC 394
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT----ESVTCYNCSG 64
C+ C + GH C S+ ++R +K C+ C H ++EC S+ CY C
Sbjct: 305 CFKCGEEGHMSRDC---SNGNSR-EKKNNSCFNCGEITHMSKECPNPKKPRSIQCYKCQQ 360
Query: 65 QGHVAKDCTVKSS-----IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+GH+AKDC + C+ C GH + +C C C + GH +K+C
Sbjct: 361 EGHMAKDCPNAQQYQARVMKCFLCKKEGHKSNDCT--EPPLCMKCKEQGHQSKDC----- 413
Query: 120 GKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
++P+ + C+ CG +GH + C Q++
Sbjct: 414 -QNPDHM--NKRVCFNCGDEGHPTKGCPQNQQN 443
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 19/110 (17%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGD---------------KVGIVCYKCNNYGHFARECA 53
C+NC D GH CPQ R + + C+KC GH A +C
Sbjct: 424 CFNCGDEGHPTKGCPQNQQNSFRNNNDTNSTYQKPGGFQQREKPKCFKCQKEGHRAIDC- 482
Query: 54 TESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFARNCPNDSSKR 100
TE C+ C H +K+C +C+NC H +++CP +R
Sbjct: 483 TELPYCFKCLQNIHSSKECDHPENSKKRVCFNCGDEKHCSKDCPKVQQRR 532
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 18/74 (24%)
Query: 96 DSSKRCYACHQAGHMAKECP-GQTAGKS-----------------PEPVVDMSLTCYVCG 137
+ K C+ C + GHM+++C G + K P P S+ CY C
Sbjct: 300 ERKKGCFKCGEEGHMSRDCSNGNSREKKNNSCFNCGEITHMSKECPNPKKPRSIQCYKCQ 359
Query: 138 HQGHLSYDCKLVQK 151
+GH++ DC Q+
Sbjct: 360 QEGHMAKDCPNAQQ 373
>gi|330915239|ref|XP_003296952.1| hypothetical protein PTT_07202 [Pyrenophora teres f. teres 0-1]
gi|311330642|gb|EFQ94956.1| hypothetical protein PTT_07202 [Pyrenophora teres f. teres 0-1]
Length = 389
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 78 IICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
+CY C GH ARNC + CY CH+AGH+A++C P P+ TCY
Sbjct: 282 FMCYKCRGEGHLARNCTVKLEPKPAICYKCHEAGHIARKC----TKVPPAPITKKPFTCY 337
Query: 135 VCGHQGHLSYDCKLVQK 151
CG GH++ +C L+ +
Sbjct: 338 NCGESGHMARECTLLDR 354
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 10/66 (15%)
Query: 59 CYNCSGQGHVAKDCTVK---SSIICYNCNSSGHFARNC----PNDSSKR---CYACHQAG 108
CY C G+GH+A++CTVK ICY C+ +GH AR C P +K+ CY C ++G
Sbjct: 284 CYKCRGEGHLARNCTVKLEPKPAICYKCHEAGHIARKCTKVPPAPITKKPFTCYNCGESG 343
Query: 109 HMAKEC 114
HMA+EC
Sbjct: 344 HMAREC 349
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 34/71 (47%), Gaps = 11/71 (15%)
Query: 34 KVGIVCYKCNNYGHFARECAT----ESVTCYNCSGQGHVAKDCT-------VKSSIICYN 82
+V +CYKC GH AR C + CY C GH+A+ CT K CYN
Sbjct: 279 QVPFMCYKCRGEGHLARNCTVKLEPKPAICYKCHEAGHIARKCTKVPPAPITKKPFTCYN 338
Query: 83 CNSSGHFARNC 93
C SGH AR C
Sbjct: 339 CGESGHMAREC 349
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 14/80 (17%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-------- 54
S CY C GH +C K +CYKC+ GH AR+C
Sbjct: 278 SQVPFMCYKCRGEGHLARNCTVKLEPKP------AICYKCHEAGHIARKCTKVPPAPITK 331
Query: 55 ESVTCYNCSGQGHVAKDCTV 74
+ TCYNC GH+A++CT+
Sbjct: 332 KPFTCYNCGESGHMARECTL 351
>gi|296178353|dbj|BAJ07808.1| putative vasa protein [Oxycomanthus japonicus]
Length = 851
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 69/172 (40%), Gaps = 44/172 (25%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-----TCYNCS 63
CY C + GH CP SA G G C+KC GHFAREC + C+ C
Sbjct: 195 CYKCGEDGHISRDCP---SAGGGGGGGGRGCHKCGEEGHFARECPSGGGGGGGRACHKCG 251
Query: 64 GQGHVAKDC------TVKSSIICYNCNSSGHFARNCPN----DSSKRCYACHQAGHMAKE 113
+GH A++C C C GHFAR CP+ + C+ C + GH A++
Sbjct: 252 EEGHFARECPSGGGGGGGGGRACRKCGEEGHFARECPSGGGGGGGRGCFKCGKDGHQARD 311
Query: 114 CPGQTA-------------------GKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C + + GKS C CG +GH + +C
Sbjct: 312 CTEEGSSGGRSGGFRGGFGNSSGGDGKS-------DTACRKCGEEGHFAREC 356
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 25/134 (18%)
Query: 31 RGDKVG-IVCYKCNNYGHFARECAT-------ESVTCYNCSGQGHVAKDC----TVKSSI 78
+G +VG CYKC GH +R+C + C+ C +GH A++C
Sbjct: 186 KGSRVGGRSCYKCGEDGHISRDCPSAGGGGGGGGRGCHKCGEEGHFARECPSGGGGGGGR 245
Query: 79 ICYNCNSSGHFARNCPN------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLT 132
C+ C GHFAR CP+ + C C + GH A+ECP G
Sbjct: 246 ACHKCGEEGHFARECPSGGGGGGGGGRACRKCGEEGHFARECPSGGGGGG-------GRG 298
Query: 133 CYVCGHQGHLSYDC 146
C+ CG GH + DC
Sbjct: 299 CFKCGKDGHQARDC 312
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 55/151 (36%), Gaps = 39/151 (25%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-------TCYN 61
C+ C + GH+ CP C+KC GHFAREC + C
Sbjct: 222 CHKCGEEGHFARECPSGGGGGGG-----RACHKCGEEGHFARECPSGGGGGGGGGRACRK 276
Query: 62 CSGQGHVAKDC----TVKSSIICYNCNSSGHFARNCPND--------------------- 96
C +GH A++C C+ C GH AR+C +
Sbjct: 277 CGEEGHFARECPSGGGGGGGRGCFKCGKDGHQARDCTEEGSSGGRSGGFRGGFGNSSGGD 336
Query: 97 --SSKRCYACHQAGHMAKECPGQTAGKSPEP 125
S C C + GH A+ECP +AG P
Sbjct: 337 GKSDTACRKCGEEGHFARECPNPSAGGEDRP 367
>gi|71005698|ref|XP_757515.1| hypothetical protein UM01368.1 [Ustilago maydis 521]
gi|46096638|gb|EAK81871.1| hypothetical protein UM01368.1 [Ustilago maydis 521]
Length = 255
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 53/114 (46%), Gaps = 16/114 (14%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT--ESVTCY 60
S+ T QCYNC GH + CP + CY C GH CAT + C+
Sbjct: 36 SSETKQCYNCGGRGHTKTDCPSVNIQQ---------CYACGGKGHIKANCATVDKQKKCF 86
Query: 61 NCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNC----PNDSSKRCYACHQAGH 109
C G+GH+ +C T + C C + H A++C P K CY C+Q+GH
Sbjct: 87 GCGGRGHIKAECATANKPLKCRRCGEANHLAKHCTATMPALKPKPCYTCNQSGH 140
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 39 CYKCNNYGHFARECATESVT-CYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNCPN- 95
CY C GH +C + ++ CY C G+GH+ +C TV C+ C GH C
Sbjct: 42 CYNCGGRGHTKTDCPSVNIQQCYACGGKGHIKANCATVDKQKKCFGCGGRGHIKAECATA 101
Query: 96 DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGH 141
+ +C C +A H+AK C P+P CY C GH
Sbjct: 102 NKPLKCRRCGEANHLAKHCTATMPALKPKP-------CYTCNQSGH 140
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Query: 53 ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN-DSSKRCYACHQAGHMA 111
++E+ CYNC G+GH DC + CY C GH NC D K+C+ C GH+
Sbjct: 36 SSETKQCYNCGGRGHTKTDCPSVNIQQCYACGGKGHIKANCATVDKQKKCFGCGGRGHIK 95
Query: 112 KECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
EC TA K L C CG HL+ C
Sbjct: 96 AEC--ATANK--------PLKCRRCGEANHLAKHC 120
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
CYNC GH +CP+ + ++CYAC GH+ C VD C+ CG +
Sbjct: 42 CYNCGGRGHTKTDCPSVNIQQCYACGGKGHIKANCA----------TVDKQKKCFGCGGR 91
Query: 140 GHLSYDCKLVQK 151
GH+ +C K
Sbjct: 92 GHIKAECATANK 103
>gi|302757968|ref|XP_002962407.1| hypothetical protein SELMODRAFT_438147 [Selaginella moellendorffii]
gi|300169268|gb|EFJ35870.1| hypothetical protein SELMODRAFT_438147 [Selaginella moellendorffii]
Length = 1326
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 60/167 (35%), Gaps = 38/167 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+NC GH CP K+ R K G + CYNC +GH
Sbjct: 258 CFNCGKVGHLSAQCPLKTERGERSPKRLRPSEDDRKRGRGKQ--------CYNCGEEGHK 309
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVD 128
++ C K S+ N G A KRC+ CH++GH+ ECP + G +P
Sbjct: 310 SRVCPRKVSVSVTNKEDGGRRA------DEKRCFNCHESGHLLFECPMFSDGDAPRNESA 363
Query: 129 MSL------------------------TCYVCGHQGHLSYDCKLVQK 151
S+ C+ CG GH Y C +K
Sbjct: 364 RSVGDNACVLYKTKLTDAEKNQYLRQNKCFTCGKSGHPYYSCPQSEK 410
Score = 42.0 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 44/123 (35%), Gaps = 21/123 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVG------IVCYKCNNYGHFARECA--TESVTC 59
QCYNC + GH CP+K S + G C+ C+ GH EC ++
Sbjct: 299 QCYNCGEEGHKSRVCPRKVSVSVTNKEDGGRRADEKRCFNCHESGHLLFECPMFSDGDAP 358
Query: 60 YNCSGQGHVAKDCTVKSSII-------------CYNCNSSGHFARNCPNDSSKRCYACHQ 106
N S + C + + + C+ C SGH +CP + Y
Sbjct: 359 RNESARSVGDNACVLYKTKLTDAEKNQYLRQNKCFTCGKSGHPYYSCPQSEKRLEYVFED 418
Query: 107 AGH 109
H
Sbjct: 419 REH 421
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 89 FARNCPNDSSKRCYACHQAGHMAKECP-----GQTAGKSPEPVVD-----MSLTCYVCGH 138
F R + C+ C + GH++ +CP G+ + K P D CY CG
Sbjct: 246 FERRHNERDRRSCFNCGKVGHLSAQCPLKTERGERSPKRLRPSEDDRKRGRGKQCYNCGE 305
Query: 139 QGHLSYDC 146
+GH S C
Sbjct: 306 EGHKSRVC 313
>gi|359483052|ref|XP_003632892.1| PREDICTED: zinc finger protein GIS2-like [Vitis vinifera]
Length = 147
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 31 RGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFA 90
R + +C KC GHF+R+C + C NC GH+A +C S+ IC+NC SGH A
Sbjct: 33 RVHRQDYLCNKCKRPGHFSRDCPNVT-RCNNCGLPGHIAAECN--STTICWNCKESGHLA 89
Query: 91 RNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
PND C+ C + GH+A++C P D L C C GH++ +C
Sbjct: 90 SQFPNDPV--CHMCGKMGHLAQDCSCLGL-----PAHDARL-CNNCYKPGHIATNC 137
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 17/97 (17%)
Query: 50 RECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
R + C C GH ++DC + C NC GH A C +S+ C+ C ++GH
Sbjct: 32 RRVHRQDYLCNKCKRPGHFSRDCP--NVTRCNNCGLPGHIAAEC--NSTTICWNCKESGH 87
Query: 110 MAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+A + P +PV C++CG GHL+ DC
Sbjct: 88 LASQFPN-------DPV------CHMCGKMGHLAQDC 111
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 14/103 (13%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGI--------VCYKCNNYGHFARECATESVTCY 60
C C GH+ CP + + G I +C+ C GH A + + V C+
Sbjct: 41 CNKCKRPGHFSRDCPNVTRCNNCGLPGHIAAECNSTTICWNCKESGHLASQFPNDPV-CH 99
Query: 61 NCSGQGHVAKDCT-----VKSSIICYNCNSSGHFARNCPNDSS 98
C GH+A+DC+ + +C NC GH A NC N+ +
Sbjct: 100 MCGKMGHLAQDCSCLGLPAHDARLCNNCYKPGHIATNCTNEKA 142
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 17/75 (22%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC------ATESVT 58
ST C+NC + GH P VC+ C GH A++C A ++
Sbjct: 75 STTICWNCKESGHLASQFPNDP-----------VCHMCGKMGHLAQDCSCLGLPAHDARL 123
Query: 59 CYNCSGQGHVAKDCT 73
C NC GH+A +CT
Sbjct: 124 CNNCYKPGHIATNCT 138
>gi|242089287|ref|XP_002440476.1| hypothetical protein SORBIDRAFT_09g001570 [Sorghum bicolor]
gi|241945761|gb|EES18906.1| hypothetical protein SORBIDRAFT_09g001570 [Sorghum bicolor]
Length = 669
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 76/213 (35%), Gaps = 81/213 (38%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TESVTCYNCSG 64
CY C GH+ SCP K +D R CY+C GH + C +E+ CY C
Sbjct: 393 CYECGTPGHFSSSCPNKKDSDVRK------CYECGTPGHLSSACPNKKDSEARKCYECGT 446
Query: 65 QGHVAKDCTVK--SSII--------------------CYNCNSSGHFARNCPND------ 96
GH++ C K S +I CY C GH + +CPN
Sbjct: 447 PGHLSSACPNKKDSDVISDEKDANANSAIAASKKRRTCYECGIPGHLSSSCPNKKDSEFI 506
Query: 97 --------------SSKR--CYACHQAGHMAKECPGQTAGKSP---EPVVD-------MS 130
S KR CY C GH++ CP + + P EPV D MS
Sbjct: 507 SDEKKTNVDSATAPSKKRRTCYECGTPGHLSSACPNKRSDSVPNNREPVDDAKPATTIMS 566
Query: 131 -----------------LTCYVCGHQGHLSYDC 146
CY CG GHLS C
Sbjct: 567 EETKVGDESNSAASKKRRKCYECGISGHLSSAC 599
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 24/126 (19%)
Query: 41 KCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSS---IICYNCNSSGHFARNCPND- 96
K N+ G+ + +++ TCY C GH + C K CY C + GH + CPN
Sbjct: 376 KVNDNGN-SDNLKSKNRTCYECGTPGHFSSSCPNKKDSDVRKCYECGTPGHLSSACPNKK 434
Query: 97 --SSKRCYACHQAGHMAKECPGQTAGKSPEPVVD--------------MSLTCYVCGHQG 140
+++CY C GH++ CP + K + + D TCY CG G
Sbjct: 435 DSEARKCYECGTPGHLSSACPNK---KDSDVISDEKDANANSAIAASKKRRTCYECGIPG 491
Query: 141 HLSYDC 146
HLS C
Sbjct: 492 HLSSSC 497
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 78/255 (30%), Gaps = 125/255 (49%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES----------- 56
+CY C GH +CP K ++AR CY+C GH + C +
Sbjct: 416 KCYECGTPGHLSSACPNKKDSEARK------CYECGTPGHLSSACPNKKDSDVISDEKDA 469
Query: 57 ------------VTCYNCSGQGHVAKDCTVK--SSII--------------------CYN 82
TCY C GH++ C K S I CY
Sbjct: 470 NANSAIAASKKRRTCYECGIPGHLSSSCPNKKDSEFISDEKKTNVDSATAPSKKRRTCYE 529
Query: 83 CNSSGHFARNCPNDSS--------------------------------------KRCYAC 104
C + GH + CPN S ++CY C
Sbjct: 530 CGTPGHLSSACPNKRSDSVPNNREPVDDAKPATTIMSEETKVGDESNSAASKKRRKCYEC 589
Query: 105 HQAGHMAKECPGQTAGKSPEPVVD-----------MSL---------------------- 131
+GH++ CP + A EPV + +S+
Sbjct: 590 GISGHLSSACPNKKAA---EPVYNEEKPDNQSNTVLSVVADEKKANEDTKSAPAKKKKRR 646
Query: 132 TCYVCGHQGHLSYDC 146
TCY CG GHLS +C
Sbjct: 647 TCYECGIAGHLSSEC 661
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 52/142 (36%), Gaps = 29/142 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGI--------VCYKCNNYGHFARECATESV-TC 59
CY C GH +CP K S ++ + + + G + A++ C
Sbjct: 527 CYECGTPGHLSSACPNKRSDSVPNNREPVDDAKPATTIMSEETKVGDESNSAASKKRRKC 586
Query: 60 YNCSGQGHVAKDCTVKSSI------------------ICYNCNSSGHFARNCPNDSSKR- 100
Y C GH++ C K + + + + ++ P KR
Sbjct: 587 YECGISGHLSSACPNKKAAEPVYNEEKPDNQSNTVLSVVADEKKANEDTKSAPAKKKKRR 646
Query: 101 -CYACHQAGHMAKECPGQTAGK 121
CY C AGH++ ECP + A K
Sbjct: 647 TCYECGIAGHLSSECPNKAATK 668
>gi|357156364|ref|XP_003577431.1| PREDICTED: uncharacterized protein LOC100831383 isoform 1
[Brachypodium distachyon]
Length = 476
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 77/178 (43%), Gaps = 43/178 (24%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+NC + GH +C +K C+ C +GH A++C T+ C+ C GH+
Sbjct: 169 CFNCGEEGHVATNCTM--------EKRKKPCFICGLFGHIAKQC-TQGQDCFICKKGGHM 219
Query: 69 AKDC-------TVKSSIICYNCNSSGHFARNCPNDSSK------RCYACHQAGHM----- 110
AKDC T +S+ +C C GH C ND + +CY C Q+GH+
Sbjct: 220 AKDCPDKHNINTQQSTTLCLRCGEIGHDMFACTNDYPRDDVKEIKCYVCKQSGHLCCTDF 279
Query: 111 ----AKEC-------PGQT----AGKSPEPVVDMSLT-CYVCGHQGHLSYDCKLVQKS 152
KE PG T A + E V + T CY CG +GH + C + S
Sbjct: 280 SDNCPKEVTCYNCAQPGHTGLGCAKQRRETSVATTPTLCYKCGKEGHFARGCTNIANS 337
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 53/122 (43%), Gaps = 17/122 (13%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGH-----FARECATESVTC 59
ST C C + GH ++C ++ R D I CY C GH F+ C E VTC
Sbjct: 234 STTLCLRCGEIGHDMFAC---TNDYPRDDVKEIKCYVCKQSGHLCCTDFSDNCPKE-VTC 289
Query: 60 YNCSGQGHVAKDC--------TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMA 111
YNC+ GH C + +CY C GHFAR C N ++ + + H
Sbjct: 290 YNCAQPGHTGLGCAKQRRETSVATTPTLCYKCGKEGHFARGCTNIANSDRFKGELSAHSR 349
Query: 112 KE 113
K+
Sbjct: 350 KK 351
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 58 TCYNCSGQGHVAKDCTV-KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
TC+NC +GHVA +CT+ K C+ C GH A+ C + C+ C + GHMAK+CP
Sbjct: 168 TCFNCGEEGHVATNCTMEKRKKPCFICGLFGHIAKQCTQ--GQDCFICKKGGHMAKDCPD 225
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ + + + C CG GH + C
Sbjct: 226 KHNINTQQ----STTLCLRCGEIGHDMFAC 251
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 51/121 (42%), Gaps = 18/121 (14%)
Query: 32 GDKVGIVCYKCNNYGHFARECATESVT--CYNCSGQGHVAKDCTVKSSIICYNCNSSGHF 89
G+ + C+ C GH A C E C+ C GH+AK CT C+ C GH
Sbjct: 162 GETILETCFNCGEEGHVATNCTMEKRKKPCFICGLFGHIAKQCTQGQD--CFICKKGGHM 219
Query: 90 ARNCPN-------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDM-SLTCYVCGHQGH 141
A++CP+ S+ C C + GH C P D+ + CYVC GH
Sbjct: 220 AKDCPDKHNINTQQSTTLCLRCGEIGHDMFACTNDY------PRDDVKEIKCYVCKQSGH 273
Query: 142 L 142
L
Sbjct: 274 L 274
>gi|390601378|gb|EIN10772.1| hypothetical protein PUNSTDRAFT_18872, partial [Punctularia
strigosozonata HHB-11173 SS5]
Length = 128
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 18/123 (14%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCPN 95
C+KC N GH A C++E CYNC GH + C ++ CY+C GH CP+
Sbjct: 5 CFKCGNLGHIAENCSSEQRLCYNCRQAGHESSACPSPRTVSAKQCYSCGGVGHIQAECPS 64
Query: 96 ----DSSKRCYACHQAGHMAKECPGQ-----------TAGKSPEPVVDMSLTCYVCGHQG 140
+++CY C + GH+A+ CPG G+ + CY CG
Sbjct: 65 LRVQGGTQKCYNCGRFGHIARVCPGGAGGGGFASRIAPPGRGLNTSTLPPVKCYRCGGPN 124
Query: 141 HLS 143
H++
Sbjct: 125 HMA 127
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 11/91 (12%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND---SSKRCYACHQAGHMAKECP 115
C+ C GH+A++C+ + + CYNC +GH + CP+ S+K+CY+C GH+ ECP
Sbjct: 5 CFKCGNLGHIAENCSSEQRL-CYNCRQAGHESSACPSPRTVSAKQCYSCGGVGHIQAECP 63
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
V + CY CG GH++ C
Sbjct: 64 SLR-------VQGGTQKCYNCGRFGHIARVC 87
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
C+ C + GH A NC ++ + CY C QAGH + CP P + CY CG
Sbjct: 5 CFKCGNLGHIAENCSSEQ-RLCYNCRQAGHESSACP--------SPRTVSAKQCYSCGGV 55
Query: 140 GHLSYDCKLVQ 150
GH+ +C ++
Sbjct: 56 GHIQAECPSLR 66
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 7/91 (7%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
+ S QCY+C GH Q CP S +G CY C +GH AR C +
Sbjct: 43 TVSAKQCYSCGGVGHIQAECP---SLRVQGGTQ--KCYNCGRFGHIARVCPGGAGGGGFA 97
Query: 63 SGQGHVAK--DCTVKSSIICYNCNSSGHFAR 91
S + + + + CY C H AR
Sbjct: 98 SRIAPPGRGLNTSTLPPVKCYRCGGPNHMAR 128
>gi|281209489|gb|EFA83657.1| hypothetical protein PPL_02723 [Polysphondylium pallidum PN500]
Length = 111
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII--------CYNCNSSGHF 89
+CYKC GH A C TE + C C GH+A+DC+ K S CY+C+ +GH
Sbjct: 7 LCYKCQKPGHKAAGC-TEEIVCRVCKQPGHMARDCSEKRSAPAPSEGGAKCYSCHQTGHI 65
Query: 90 ARNCPNDSSKRCYACHQAGHMAKECPGQ 117
+NCP +++RC+ C GH++ CP +
Sbjct: 66 QKNCP--TARRCFNCGGVGHISSACPSE 91
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCS 63
T I C C GH C +K SA A + G CY C+ GH + C T + C+NC
Sbjct: 22 TEEIVCRVCKQPGHMARDCSEKRSAPAPSEG-GAKCYSCHQTGHIQKNCPT-ARRCFNCG 79
Query: 64 GQGHVAKDC 72
G GH++ C
Sbjct: 80 GVGHISSAC 88
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 79 ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGH 138
+CY C GH A C + C C Q GHMA++C + + +P + CY C
Sbjct: 7 LCYKCQKPGHKAAGCTEEIV--CRVCKQPGHMARDCSEKRSAPAPS---EGGAKCYSCHQ 61
Query: 139 QGHLSYDCKLVQK 151
GH+ +C ++
Sbjct: 62 TGHIQKNCPTARR 74
>gi|307136096|gb|ADN33944.1| cold-shock DNA-binding family protein [Cucumis melo subsp. melo]
Length = 272
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 58/144 (40%), Gaps = 37/144 (25%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-----------ESV 57
CY C + GH C + S+ G G C+ C GH AR+C
Sbjct: 126 CYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGSGGG 185
Query: 58 TCYNCSGQGHVAKDCT---------VKSSIICYNCNSSGHFARNCPND------------ 96
CYNC G GH+A+DC C+NC GH AR+C N+
Sbjct: 186 ACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGRFG 245
Query: 97 -----SSKRCYACHQAGHMAKECP 115
S C+ C ++GH A+ECP
Sbjct: 246 GGGGGGSNTCFNCGKSGHFARECP 269
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 50/117 (42%), Gaps = 28/117 (23%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGI-VCYKCNNYGHFAREC----------ATESV 57
C+ C + GH CP+ +S G G CY C +GH AR+C
Sbjct: 156 CFTCGEVGHLARDCPRGNSGGGGGGGSGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGG 215
Query: 58 TCYNCSGQGHVAKDCTVKSSI-----------------ICYNCNSSGHFARNCPNDS 97
C+NC GH+A+DC +S C+NC SGHFAR CP+ S
Sbjct: 216 GCFNCGEYGHIARDCQNESRGSGGGGGRFGGGGGGGSNTCFNCGKSGHFARECPDAS 272
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 56/143 (39%), Gaps = 35/143 (24%)
Query: 39 CYKCNNYGHFARECATES----------VTCYNCSGQGHVAKDC----------TVKSSI 78
CY+C GH AR+C S C+ C GH+A+DC
Sbjct: 126 CYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGSGGG 185
Query: 79 ICYNCNSSGHFARNCPNDSSKR---------CYACHQAGHMAKECPGQTAGKSPEPVVDM 129
CYNC GH AR+C + C+ C + GH+A++C ++ G
Sbjct: 186 ACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGRFG 245
Query: 130 SL------TCYVCGHQGHLSYDC 146
TC+ CG GH + +C
Sbjct: 246 GGGGGGSNTCFNCGKSGHFAREC 268
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 21/108 (19%)
Query: 59 CYNCSGQGHVAKDCTVKSS---------IICYNCNSSGHFARNCPNDSSKR--------- 100
CY C QGH+A+DCT S+ C+ C GH AR+CP +S
Sbjct: 126 CYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGSGGG 185
Query: 101 -CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
CY C GH+A++C G C+ CG GH++ DC+
Sbjct: 186 ACYNCGGFGHLARDC--NRGGAGGGSGGGGGGGCFNCGEYGHIARDCQ 231
>gi|294867092|ref|XP_002764960.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239864813|gb|EEQ97677.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 680
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 70/207 (33%), Gaps = 69/207 (33%)
Query: 8 QCYNCFDFGHYQYSCPQKSSA---------------DARGDK------VGIVCYKCNNYG 46
+C NCF FGH CP ++ D G G++C C G
Sbjct: 443 KCANCFRFGHRARECPNLTTCAKCFQAAACPNAIMCDKCGKPGHPAVWCGVICRNCGQEG 502
Query: 47 HFARECATESVTCYNCSGQGHVAKDCTVKSS---------------------IICYNCNS 85
H R+C V C NC GH A +C S + C C
Sbjct: 503 HMIRQCPMPQV-CRNCGQPGHKAGECPNPPSRYETKEADPNENPMTSGRHGPVQCLQCLQ 561
Query: 86 SGHFARNCPNDSSKRCYACHQAGHMAKECP------------GQTAGKSPEPVVDMS--- 130
GH AR+CPN C AGH +++CP G K+P P D +
Sbjct: 562 YGHIARDCPNPRVCHRCRCGVAGHESRQCPHPVLASQILPNRGILPEKNPIPGADSTEGG 621
Query: 131 -----------LTCYVCGHQGHLSYDC 146
+ C C GH+S DC
Sbjct: 622 VVSSSRSVNSNIQCLQCLQYGHISKDC 648
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 51/202 (25%), Positives = 65/202 (32%), Gaps = 87/202 (43%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES------------ 56
C NC GH CP VC C GH A EC
Sbjct: 495 CRNCGQEGHMIRQCPMPQ-----------VCRNCGQPGHKAGECPNPPSRYETKEADPNE 543
Query: 57 ----------VTCYNCSGQGHVAKDCTVKSSIICYNCNS--SGHFARNCPN--------- 95
V C C GH+A+DC + +C+ C +GH +R CP+
Sbjct: 544 NPMTSGRHGPVQCLQCLQYGHIARDC--PNPRVCHRCRCGVAGHESRQCPHPVLASQILP 601
Query: 96 --------------DSSK--------------RCYACHQAGHMAKECPGQTAGKSPEPVV 127
DS++ +C C Q GH++K+CP A
Sbjct: 602 NRGILPEKNPIPGADSTEGGVVSSSRSVNSNIQCLQCLQYGHISKDCPNARA-------- 653
Query: 128 DMSLTCYVCGHQGHLSYDCKLV 149
CY CG GH S C LV
Sbjct: 654 -----CYRCGQPGHESRQCPLV 670
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
C NC GH AR CPN ++ C C QA GK P V + C CG +
Sbjct: 444 CANCFRFGHRARECPNLTT--CAKCFQAAACPNAIMCDKCGKPGHPAVWCGVICRNCGQE 501
Query: 140 GHLSYDCKLVQ 150
GH+ C + Q
Sbjct: 502 GHMIRQCPMPQ 512
>gi|294893606|ref|XP_002774556.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239879949|gb|EER06372.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 497
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 29/136 (21%)
Query: 5 STIQCYNCFDFGHYQYSCP--------------------QKSSADARGDKVGIVCYKCNN 44
S CY C + GH CP ++S+ AR +CY C+
Sbjct: 362 SQKDCYICGELGHIASECPNRDQQRPREGRLTSRWAKNEDRASSWARASADDELCYNCHQ 421
Query: 45 YGHFARECATESVTCYNCSGQGHVAKDCTVKSS------IICYNCNSSGHFARNCPNDSS 98
GH AR+C + C NC +GH+A+DC +C NC +GH +R+C N
Sbjct: 422 RGHKARDCKNRPI-CRNCHREGHIAQDCLASRGDAPSEHTVCRNCRQTGHLSRDCHNPPV 480
Query: 99 KRCYACHQAGHMAKEC 114
C C++ GH A C
Sbjct: 481 --CNRCNKVGHKAAAC 494
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 60/151 (39%), Gaps = 17/151 (11%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-ESVTCYNCS 63
+ I C C GH Y CPQ R + CY C GH A EC +
Sbjct: 333 NEIVCNKCGGAGHKAYECPQGEDRSPR-KRSQKDCYICGELGHIASECPNRDQQRPREGR 391
Query: 64 GQGHVAKDCTVKSSI--------ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
AK+ SS +CYNC+ GH AR+C N C CH+ GH+A++C
Sbjct: 392 LTSRWAKNEDRASSWARASADDELCYNCHQRGHKARDCKNRPI--CRNCHREGHIAQDCL 449
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
E V C C GHLS DC
Sbjct: 450 ASRGDAPSEHTV-----CRNCRQTGHLSRDC 475
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 76/244 (31%), Gaps = 105/244 (43%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIV-------------------CYKCNN 44
T+ I C C GH CP GD+V +V C C
Sbjct: 192 TNDIVCNKCLKPGHKVADCPMLRE----GDEVTMVDEEEDDDRAFEFDSGTKDYCLNCKG 247
Query: 45 YGHFARECATESVTCYNCSGQGHVAKDC-------------------------------- 72
YGHFAR+C E V C C +GH+A +C
Sbjct: 248 YGHFARDCPNEPV-CNACGMEGHIAVNCPRARRGFSRGRSPSREAKWESSPAGRGGWFSD 306
Query: 73 ----TVKSSIICYNCNSSGHFARNCPND---------------------------SSKRC 101
+ IC NC GH R+CPN+ S K C
Sbjct: 307 RFDRALIDEEICLNCKRPGHVFRDCPNEIVCNKCGGAGHKAYECPQGEDRSPRKRSQKDC 366
Query: 102 YACHQAGHMAKECPGQTAGKSPEPVVDMSLT------------------CYVCGHQGHLS 143
Y C + GH+A ECP + + E + CY C +GH +
Sbjct: 367 YICGELGHIASECPNRDQQRPREGRLTSRWAKNEDRASSWARASADDELCYNCHQRGHKA 426
Query: 144 YDCK 147
DCK
Sbjct: 427 RDCK 430
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 56/148 (37%), Gaps = 41/148 (27%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCS 63
T +C C GH CP K ++C C GH R+C T + C C
Sbjct: 153 THLPRCILCDKDGHLSMDCPMKD----------VMCLNCKEMGHRTRDC-TNDIVCNKCL 201
Query: 64 GQGHVAKDCTV------------------------KSSIICYNCNSSGHFARNCPNDSSK 99
GH DC + + C NC GHFAR+CPN+
Sbjct: 202 KPGHKVADCPMLREGDEVTMVDEEEDDDRAFEFDSGTKDYCLNCKGYGHFARDCPNEPV- 260
Query: 100 RCYACHQAGHMAKECP----GQTAGKSP 123
C AC GH+A CP G + G+SP
Sbjct: 261 -CNACGMEGHIAVNCPRARRGFSRGRSP 287
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 58/169 (34%), Gaps = 44/169 (26%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C NC GH++ C ++ VCY C GH EC + C C GH
Sbjct: 100 CRNCGLTGHWEGQCDKEP-----------VCYNCRRSGHRVSECPVKERICRRCRRPGHE 148
Query: 69 AKDCT------------------VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
KDCT ++C NC GH R+C ND C C + GH
Sbjct: 149 EKDCTHLPRCILCDKDGHLSMDCPMKDVMCLNCKEMGHRTRDCTNDIV--CNKCLKPGHK 206
Query: 111 AKECPGQTAGKS-----PEPVVDMSLT--------CYVCGHQGHLSYDC 146
+CP G E D + C C GH + DC
Sbjct: 207 VADCPMLREGDEVTMVDEEEDDDRAFEFDSGTKDYCLNCKGYGHFARDC 255
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 66/185 (35%), Gaps = 62/185 (33%)
Query: 8 QCYNCFDFGHYQYSC-----------------PQKSSADARGDKVGI------------- 37
+C NC FGH + C P++ S D R G+
Sbjct: 23 KCDNCGGFGHKRAQCPTPLLWPAPSHGGVEEAPRRMSNDRRAGPRGVSPYRYEGGHGGRV 82
Query: 38 ----------------VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICY 81
VC C GH+ +C E V CYNC GH +C VK IC
Sbjct: 83 EEFSRRSGRDERYRPTVCRNCGLTGHWEGQCDKEPV-CYNCRRSGHRVSECPVKER-ICR 140
Query: 82 NCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGH 141
C GH ++C + RC C + GH++ +CP + + C C GH
Sbjct: 141 RCRRPGHEEKDCTH--LPRCILCDKDGHLSMDCPMK------------DVMCLNCKEMGH 186
Query: 142 LSYDC 146
+ DC
Sbjct: 187 RTRDC 191
>gi|256090146|ref|XP_002581074.1| cellular nucleic acid binding protein [Schistosoma mansoni]
Length = 141
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 62/143 (43%), Gaps = 42/143 (29%)
Query: 39 CYKCNNYGHFARECATESVT-----------------CYNCSGQGHVAKDCT-------- 73
C+ C H+AR+C + C+NC G GH A+DCT
Sbjct: 6 CFNCGGLDHYARDCTSGRGHYGGGGGGGYGGYGGRDKCFNCGGTGHFARDCTNDGQRGDS 65
Query: 74 -------VKSSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAGKSPEP 125
CY+C SGH RNCPN++S CY C++ GH A++C ++ G P+
Sbjct: 66 GYNGGGGGGGGGRCYSCGESGHIVRNCPNNNSDTLCYRCNKYGHFARDCT-ESGGSGPQ- 123
Query: 126 VVDMSLTCYVCGHQGHLSYDCKL 148
CY C GH++ C +
Sbjct: 124 -------CYKCHGYGHIASRCNV 139
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 54/132 (40%), Gaps = 26/132 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV-------CYKCNNYGHFARECATES----- 56
C+NC HY C G G C+ C GHFAR+C +
Sbjct: 6 CFNCGGLDHYARDCTSGRGHYGGGGGGGYGGYGGRDKCFNCGGTGHFARDCTNDGQRGDS 65
Query: 57 -----------VTCYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNCPND--SSKRCY 102
CY+C GH+ ++C S +CY CN GHFAR+C S +CY
Sbjct: 66 GYNGGGGGGGGGRCYSCGESGHIVRNCPNNNSDTLCYRCNKYGHFARDCTESGGSGPQCY 125
Query: 103 ACHQAGHMAKEC 114
CH GH+A C
Sbjct: 126 KCHGYGHIASRC 137
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 11/72 (15%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CYNCSG 64
+CY+C + GH +CP +S +CY+CN YGHFAR+C + CY C G
Sbjct: 78 RCYSCGESGHIVRNCPNNNSD--------TLCYRCNKYGHFARDCTESGGSGPQCYKCHG 129
Query: 65 QGHVAKDCTVKS 76
GH+A C V++
Sbjct: 130 YGHIASRCNVEA 141
>gi|268554107|ref|XP_002635041.1| Hypothetical protein CBG13587 [Caenorhabditis briggsae]
Length = 148
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 58/147 (39%), Gaps = 34/147 (23%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSG 64
S CY C GH +CPQ+ R G VCY C GHF+R+C G
Sbjct: 2 SDQSCYKCQQPGHISRNCPQRDQDSGR-RGGGSVCYNCQETGHFSRDCPKGGSQRGGGGG 60
Query: 65 ----------QGHVAKDCTVKSSII--------------------CYNCNSSGHFARNCP 94
+GH ++DC CYNC +GH +R C
Sbjct: 61 GGGSCYNCGGRGHFSRDCPSARDDGGSRSYGGGRGGGRGGYGGQKCYNCGRNGHISRECT 120
Query: 95 NDSS---KRCYACHQAGHMAKECPGQT 118
S KRCY C + GH+++ECP Q
Sbjct: 121 ESGSAEEKRCYNCQETGHISRECPTQN 147
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 26/115 (22%)
Query: 58 TCYNCSGQGHVAKDCTVKSSI--------ICYNCNSSGHFARNCPNDSSKRCYACHQA-- 107
+CY C GH++++C + +CYNC +GHF+R+CP S+R
Sbjct: 5 SCYKCQQPGHISRNCPQRDQDSGRRGGGSVCYNCQETGHFSRDCPKGGSQRGGGGGGGGS 64
Query: 108 -------GHMAKECPG---------QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GH +++CP G+ CY CG GH+S +C
Sbjct: 65 CYNCGGRGHFSRDCPSARDDGGSRSYGGGRGGGRGGYGGQKCYNCGRNGHISREC 119
>gi|390344347|ref|XP_003726100.1| PREDICTED: DNA-binding protein HEXBP-like isoform 1
[Strongylocentrotus purpuratus]
Length = 168
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 52/133 (39%), Gaps = 27/133 (20%)
Query: 9 CYNCFDFGHYQYSCPQ--KSSADARGDKVGIVCYKCNNYGHFARECATES---------- 56
CYNC GH CPQ CY C H AREC
Sbjct: 34 CYNCGQPGHISRDCPQGDSRGGGGGRGGSDRACYGCGATDHMARECPNSKGDSRGGGRGG 93
Query: 57 --VTCYNCSGQGHVAKDC---------TVKSSIICYNCNSSGHFARNCPNDS----SKRC 101
TCYNC GH+++DC CY C +GH +R+C N S +C
Sbjct: 94 GDRTCYNCGQPGHISRDCPQGDSRGGGRGGGDRTCYKCGITGHISRDCSNGGDSSYSDKC 153
Query: 102 YACHQAGHMAKEC 114
Y C +GH AKEC
Sbjct: 154 YKCGDSGHFAKEC 166
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 58 TCYNCSGQGHVAKDC-----------TVKSSIICYNCNSSGHFARNCPNDSSKR------ 100
TCYNC GH+++DC S CY C ++ H AR CPN
Sbjct: 33 TCYNCGQPGHISRDCPQGDSRGGGGGRGGSDRACYGCGATDHMARECPNSKGDSRGGGRG 92
Query: 101 -----CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C Q GH++++CP TCY CG GH+S DC
Sbjct: 93 GGDRTCYNCGQPGHISRDCP--QGDSRGGGRGGGDRTCYKCGITGHISRDC 141
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-----TESVTCYNCS 63
CYNC GH CPQ S CYKC GH +R+C+ + S CY C
Sbjct: 98 CYNCGQPGHISRDCPQGDSRGGGRGGGDRTCYKCGITGHISRDCSNGGDSSYSDKCYKCG 157
Query: 64 GQGHVAKDCT 73
GH AK+C+
Sbjct: 158 DSGHFAKECS 167
>gi|156369956|ref|XP_001628239.1| predicted protein [Nematostella vectensis]
gi|156215210|gb|EDO36176.1| predicted protein [Nematostella vectensis]
Length = 136
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 16/117 (13%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGI--VCYKCNNYGHFARECATESVTCYNCSGQG 66
C+ C + GH+ CP K + ++G C+KC GHF+REC + N
Sbjct: 22 CHQCGEAGHFSRECPNKGNQGEPIKRMGGGGACHKCGKEGHFSRECPNQDSQRMN----- 76
Query: 67 HVAKDCTVKSSII----CYNCNSSGHFARNCPNDS----SKRCYACHQAGHMAKECP 115
+ C SI C+ C GHF+R CPN + S C+ C + GH ++ECP
Sbjct: 77 -IQYLCQTHFSISGGRNCHKCGQEGHFSRECPNQAIQGQSDTCHKCGETGHYSRECP 132
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 55/129 (42%), Gaps = 34/129 (26%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C++C GHF+REC N QG K + C+ C GHF+R CPN S
Sbjct: 22 CHQCGEAGHFSRECP-------NKGNQGEPIK--RMGGGGACHKCGKEGHFSRECPNQDS 72
Query: 99 KR------------------CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQG 140
+R C+ C Q GH ++ECP Q + S TC+ CG G
Sbjct: 73 QRMNIQYLCQTHFSISGGRNCHKCGQEGHFSRECPNQA-------IQGQSDTCHKCGETG 125
Query: 141 HLSYDCKLV 149
H S +C +
Sbjct: 126 HYSRECPTL 134
>gi|268560866|ref|XP_002646309.1| Hypothetical protein CBG12016 [Caenorhabditis briggsae]
Length = 785
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 15/116 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CYNCSGQ 65
C+NC + GH+ CP+ + + C CN GHF+ +C V C NC +
Sbjct: 636 CHNCGEEGHFSRECPKPKQPN-------LPCRNCNEVGHFSTDCDKPKVPFGPCRNCQKE 688
Query: 66 GHVAKDCT-----VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
GH AKDC ++ + C CN GH+A CP R A + H + PG
Sbjct: 689 GHFAKDCPEERVRIEPTEPCRRCNEEGHWASECPTRPRDRDPAQYPRVHQKRVHPG 744
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 39 CYKCNNYGHFARECATE---SVTCYNCSGQGHVAKDCTVKSSII--CYNCNSSGHFARNC 93
C+ C GHF+REC ++ C NC+ GH + DC C NC GHFA++C
Sbjct: 636 CHNCGEEGHFSRECPKPKQPNLPCRNCNEVGHFSTDCDKPKVPFGPCRNCQKEGHFAKDC 695
Query: 94 PN-----DSSKRCYACHQAGHMAKECPGQTAGKSP 123
P + ++ C C++ GH A ECP + + P
Sbjct: 696 PEERVRIEPTEPCRRCNEEGHWASECPTRPRDRDP 730
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 11/104 (10%)
Query: 45 YGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR--CY 102
+G F ++ + + N G G A++ C+NC GHF+R CP C
Sbjct: 601 FGQFKKDDGFDVESTKNGGGWGEDAQNFGGDKPRGCHNCGEEGHFSRECPKPKQPNLPCR 660
Query: 103 ACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C++ GH + +C +P V C C +GH + DC
Sbjct: 661 NCNEVGHFSTDC--------DKPKVPFG-PCRNCQKEGHFAKDC 695
>gi|256090144|ref|XP_002581073.1| cellular nucleic acid binding protein [Schistosoma mansoni]
Length = 190
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 62/143 (43%), Gaps = 42/143 (29%)
Query: 39 CYKCNNYGHFARECATESVT-----------------CYNCSGQGHVAKDCT-------- 73
C+ C H+AR+C + C+NC G GH A+DCT
Sbjct: 55 CFNCGGLDHYARDCTSGRGHYGGGGGGGYGGYGGRDKCFNCGGTGHFARDCTNDGQRGDS 114
Query: 74 -------VKSSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAGKSPEP 125
CY+C SGH RNCPN++S CY C++ GH A++C ++ G P+
Sbjct: 115 GYNGGGGGGGGGRCYSCGESGHIVRNCPNNNSDTLCYRCNKYGHFARDCT-ESGGSGPQ- 172
Query: 126 VVDMSLTCYVCGHQGHLSYDCKL 148
CY C GH++ C +
Sbjct: 173 -------CYKCHGYGHIASRCNV 188
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 17/110 (15%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGH 67
+C+NC GH+ C RGD G+ CY+C GH
Sbjct: 91 KCFNCGGTGHFARDCTNDGQ---RGDS-----------GYNGGGGGGGGGRCYSCGESGH 136
Query: 68 VAKDC-TVKSSIICYNCNSSGHFARNCPND--SSKRCYACHQAGHMAKEC 114
+ ++C S +CY CN GHFAR+C S +CY CH GH+A C
Sbjct: 137 IVRNCPNNNSDTLCYRCNKYGHFARDCTESGGSGPQCYKCHGYGHIASRC 186
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 11/72 (15%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CYNCSG 64
+CY+C + GH +CP +S +CY+CN YGHFAR+C + CY C G
Sbjct: 127 RCYSCGESGHIVRNCPNNNSD--------TLCYRCNKYGHFARDCTESGGSGPQCYKCHG 178
Query: 65 QGHVAKDCTVKS 76
GH+A C V++
Sbjct: 179 YGHIASRCNVEA 190
>gi|356574813|ref|XP_003555539.1| PREDICTED: uncharacterized protein LOC100794448 [Glycine max]
Length = 533
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 70/159 (44%), Gaps = 39/159 (24%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+NC + GH +C S+A K CY C GH AR+C T++ C+ C GH
Sbjct: 167 CFNCGEDGHAAVNC---SAA-----KRKKPCYVCGGLGHNARQC-TKAQDCFICKKGGHR 217
Query: 69 AKDCTVK------SSIICYNCNSSGHFARNCPNDSSK------RCYACHQAGHM-----A 111
AKDC K S IC C +SGH +C ND S +CY C + GH+
Sbjct: 218 AKDCLEKHTSRSKSVAICLKCGNSGHDMFSCRNDYSPDDLKEIQCYVCKRVGHLCCVNTD 277
Query: 112 KECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
PG+ ++CY CG GH C ++
Sbjct: 278 DATPGE-------------ISCYKCGQLGHTGLACSRLR 303
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 46/118 (38%), Gaps = 21/118 (17%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHF----ARECATESVT 58
S S C C + GH +SC S D D I CY C GH + ++
Sbjct: 229 SKSVAICLKCGNSGHDMFSCRNDYSPD---DLKEIQCYVCKRVGHLCCVNTDDATPGEIS 285
Query: 59 CYNCSGQGHVAKDCT-VKSSII-------CYNCNSSGHFARNC------PNDSSKRCY 102
CY C GH C+ ++ I C+ C GHFAR C P S KR +
Sbjct: 286 CYKCGQLGHTGLACSRLRDEITSGATPSSCFKCGEEGHFARECTSSINFPPQSGKRNW 343
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 48/129 (37%), Gaps = 21/129 (16%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE-------S 56
T C+ C GH C +K ++ + K +C KC N GH C +
Sbjct: 203 TKAQDCFICKKGGHRAKDCLEKHTSRS---KSVAICLKCGNSGHDMFSCRNDYSPDDLKE 259
Query: 57 VTCYNCSGQGH---VAKDCTVKSSIICYNCNSSGHFARNCPN--------DSSKRCYACH 105
+ CY C GH V D I CY C GH C + C+ C
Sbjct: 260 IQCYVCKRVGHLCCVNTDDATPGEISCYKCGQLGHTGLACSRLRDEITSGATPSSCFKCG 319
Query: 106 QAGHMAKEC 114
+ GH A+EC
Sbjct: 320 EEGHFAREC 328
>gi|357459751|ref|XP_003600156.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355489204|gb|AES70407.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 651
Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 37 IVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND 96
IVC+KC GH + C + C+ C +GHV DC + ++CYNCN GH + C
Sbjct: 346 IVCFKCGEKGHKSNVCTKDEKKCFRCGQKGHVLADCK-RGDVVCYNCNEEGHISTQCTQP 404
Query: 97 SSKR 100
R
Sbjct: 405 KKVR 408
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 10/71 (14%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
+ + I C+ C + GH C + C++C GH +C V CYNC
Sbjct: 342 APAEIVCFKCGEKGHKSNVCTKDEKK----------CFRCGQKGHVLADCKRGDVVCYNC 391
Query: 63 SGQGHVAKDCT 73
+ +GH++ CT
Sbjct: 392 NEEGHISTQCT 402
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 16 GHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVK 75
G Q S P+ SA A K + N+ R A + C+ C +GH + CT K
Sbjct: 310 GKGQQSHPKPYSAPADKGK-----QRLNDERRPNRRDAPAEIVCFKCGEKGHKSNVCT-K 363
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
C+ C GH +C CY C++ GH++ +C
Sbjct: 364 DEKKCFRCGQKGHVLADCKR-GDVVCYNCNEEGHISTQC 401
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
+ I+C+ C GH + C D K+C+ C Q GH+ +C + CY
Sbjct: 344 AEIVCFKCGEKGHKSNVCTKD-EKKCFRCGQKGHVLADCKRG------------DVVCYN 390
Query: 136 CGHQGHLSYDCKLVQK 151
C +GH+S C +K
Sbjct: 391 CNEEGHISTQCTQPKK 406
>gi|74096143|ref|NP_001027593.1| DEAD-Box Protein [Ciona intestinalis]
gi|4126716|dbj|BAA36711.1| DEAD-Box Protein [Ciona intestinalis]
Length = 659
Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 20/101 (19%)
Query: 31 RGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFA 90
RG C+KC GH +REC + + + S G +K C+ C GH +
Sbjct: 45 RGGARSKGCFKCGEEGHMSRECPQNTGSGFGDSRGGARSKG--------CFKCGEEGHMS 96
Query: 91 RNCPNDS------------SKRCYACHQAGHMAKECPGQTA 119
R CP ++ SK C+ C + GHM++ECP T
Sbjct: 97 RECPQNTGSGFGDSRGGARSKGCFKCGEEGHMSRECPQNTG 137
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 9 CYNCFDFGHYQYSCPQKSSA---DARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQ 65
C+ C + GH CPQ + + D+RG C+KC GH +REC + + + S
Sbjct: 53 CFKCGEEGHMSRECPQNTGSGFGDSRGGARSKGCFKCGEEGHMSRECPQNTGSGFGDSRG 112
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
G +K C+ C GH +R CP ++
Sbjct: 113 GARSKG--------CFKCGEEGHMSRECPQNT 136
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 13/80 (16%)
Query: 80 CYNCNSSGHFARNCPNDS------------SKRCYACHQAGHMAKECPGQT-AGKSPEPV 126
C+ C GH +R CP ++ SK C+ C + GHM++ECP T +G
Sbjct: 53 CFKCGEEGHMSRECPQNTGSGFGDSRGGARSKGCFKCGEEGHMSRECPQNTGSGFGDSRG 112
Query: 127 VDMSLTCYVCGHQGHLSYDC 146
S C+ CG +GH+S +C
Sbjct: 113 GARSKGCFKCGEEGHMSREC 132
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 98 SKRCYACHQAGHMAKECPGQT-AGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
SK C+ C + GHM++ECP T +G S C+ CG +GH+S +C
Sbjct: 50 SKGCFKCGEEGHMSRECPQNTGSGFGDSRGGARSKGCFKCGEEGHMSREC 99
>gi|449549455|gb|EMD40420.1| hypothetical protein CERSUDRAFT_43704, partial [Ceriporiopsis
subvermispora B]
Length = 125
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 53/116 (45%), Gaps = 18/116 (15%)
Query: 46 GHFARECATESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCP------ND 96
GH A C +E CYNC GH + C S+ CY+C GH CP N+
Sbjct: 2 GHIAENCTSEQRLCYNCRQPGHESNACPSPRSVAAKQCYSCGGVGHIQAECPSLRVNNNN 61
Query: 97 SSKRCYACHQAGHMAKECPGQTAG-KSPEPVVDMSLT--------CYVCGHQGHLS 143
+++CY C + GH+A+ CP G S P V +L CY CG H++
Sbjct: 62 HNQKCYNCGRFGHIARNCPNAAGGFASRAPPVGRALNTSALPPVKCYRCGGPNHMA 117
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS---KRCYACHQAGHMAKECPGQTAGKS 122
GH+A++CT + + CYNC GH + CP+ S K+CY+C GH+ ECP +
Sbjct: 2 GHIAENCTSEQRL-CYNCRQPGHESNACPSPRSVAAKQCYSCGGVGHIQAECPSLRVNNN 60
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDC 146
+ + CY CG GH++ +C
Sbjct: 61 -----NHNQKCYNCGRFGHIARNC 79
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
S + QCY+C GH Q CP S + CY C +GH AR C + +
Sbjct: 33 SVAAKQCYSCGGVGHIQAECP---SLRVNNNNHNQKCYNCGRFGHIARNCPNAAGGFASR 89
Query: 63 SGQGHVAKDCTVKSSIICYNCNSSGHFAR 91
+ A + + + CY C H AR
Sbjct: 90 APPVGRALNTSALPPVKCYRCGGPNHMAR 118
>gi|297815456|ref|XP_002875611.1| hypothetical protein ARALYDRAFT_323091 [Arabidopsis lyrata subsp.
lyrata]
gi|297321449|gb|EFH51870.1| hypothetical protein ARALYDRAFT_323091 [Arabidopsis lyrata subsp.
lyrata]
Length = 556
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 56/140 (40%), Gaps = 36/140 (25%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHF----ARECATESVTCYNCSG 64
C C DFGH C + S + D I CY C ++GH + +V+CY C
Sbjct: 236 CLRCGDFGHDMILCKYEYSQE---DLKDIQCYVCKSFGHLCCVEPGNSPSWAVSCYRCGQ 292
Query: 65 QGHVAKDC-------------------TVKSSIICYNCNSSGHFARNCPNDSS------- 98
GH C + + CY C GHFAR CPN SS
Sbjct: 293 LGHTGLACGRHYEERNENDSSSLSFPENNREASECYRCGEEGHFARECPNSSSISTSQGR 352
Query: 99 ---KRCYACHQAGHMAKECP 115
CY C+ AGH A+ECP
Sbjct: 353 ESQSLCYRCNGAGHFARECP 372
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 57/139 (41%), Gaps = 38/139 (27%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------------ 54
IQCY C FGH P S + A + CY+C GH C
Sbjct: 261 IQCYVCKSFGHLCCVEPGNSPSWA------VSCYRCGQLGHTGLACGRHYEERNENDSSS 314
Query: 55 --------ESVTCYNCSGQGHVAKDCTVKSSI----------ICYNCNSSGHFARNCPND 96
E+ CY C +GH A++C SSI +CY CN +GHFAR CPN
Sbjct: 315 LSFPENNREASECYRCGEEGHFARECPNSSSISTSQGRESQSLCYRCNGAGHFARECPNS 374
Query: 97 S--SKRCYACHQAGHMAKE 113
S SKR H +++
Sbjct: 375 SQVSKRDRDTSTPSHKSRK 393
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 27/151 (17%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
+ CY+C + GH ++CP + K C+ C + H A++C ++ CY C G
Sbjct: 166 VSCYSCGEQGHTSFNCPTPT-------KRRKPCFICGSLEHGAKQC-SKGHDCYICKKGG 217
Query: 67 HVAKDCTVK-----SSIICYNCNSSGHFARNCPNDSSK------RCYACHQAGHMAKECP 115
H AKDC K +C C GH C + S+ +CY C GH+ P
Sbjct: 218 HRAKDCPDKYKNGSKGAVCLRCGDFGHDMILCKYEYSQEDLKDIQCYVCKSFGHLCCVEP 277
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G + +++CY CG GH C
Sbjct: 278 GNSP--------SWAVSCYRCGQLGHTGLAC 300
>gi|119619052|gb|EAW98646.1| zinc finger, CCHC domain containing 13, isoform CRA_a [Homo
sapiens]
Length = 132
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 35 VGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDC---TVKSSIICYNCNSSGHFAR 91
+ CY C G A+ C CYNC GH+AKDC + CY C GH AR
Sbjct: 43 LSYTCYCCGESGRNAKNCVLLGNICYNCGRSGHIAKDCKDPKRERRQHCYTCGRLGHLAR 102
Query: 92 NC-PNDSSKRCYACHQAGHMAKECPGQTA 119
+C P CY C ++ H+AKECP +
Sbjct: 103 DCDPRRGQVNCYRCGKSRHLAKECPSEVT 131
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 77 SIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVC 136
S CY C SG A+NC + CY C ++GH+AK+C +P + CY C
Sbjct: 44 SYTCYCCGESGRNAKNCVLLGNI-CYNCGRSGHIAKDCK--------DPKRERRQHCYTC 94
Query: 137 GHQGHLSYDC 146
G GHL+ DC
Sbjct: 95 GRLGHLARDC 104
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 12/68 (17%)
Query: 9 CYNCFDFGHYQYSC--PQKSSADARGDKVGIVCYKCNNYGHFARECATE--SVTCYNCSG 64
CYNC GH C P++ CY C GH AR+C V CY C
Sbjct: 67 CYNCGRSGHIAKDCKDPKRERRQH--------CYTCGRLGHLARDCDPRRGQVNCYRCGK 118
Query: 65 QGHVAKDC 72
H+AK+C
Sbjct: 119 SRHLAKEC 126
>gi|4126714|dbj|BAA36710.1| DEAD-Box Protein [Ciona intestinalis]
Length = 669
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 20/101 (19%)
Query: 31 RGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFA 90
RG C+KC GH +REC + + + S G +K C+ C GH +
Sbjct: 45 RGGARSKGCFKCGEEGHMSRECPQNTGSGFGDSRGGARSKG--------CFKCGEEGHMS 96
Query: 91 RNCPNDS------------SKRCYACHQAGHMAKECPGQTA 119
R CP ++ SK C+ C + GHM++ECP T
Sbjct: 97 RECPQNTGSGFGDSRGGARSKGCFKCGEEGHMSRECPQNTG 137
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 9 CYNCFDFGHYQYSCPQKSSA---DARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQ 65
C+ C + GH CPQ + + D+RG C+KC GH +REC + + + S
Sbjct: 53 CFKCGEEGHMSRECPQNTGSGFGDSRGGARSKGCFKCGEEGHMSRECPQNTGSGFGDSRG 112
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
G +K C+ C GH +R CP ++
Sbjct: 113 GARSKG--------CFKCGEEGHMSRECPQNT 136
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 13/80 (16%)
Query: 80 CYNCNSSGHFARNCPNDS------------SKRCYACHQAGHMAKECPGQT-AGKSPEPV 126
C+ C GH +R CP ++ SK C+ C + GHM++ECP T +G
Sbjct: 53 CFKCGEEGHMSRECPQNTGSGFGDSRGGARSKGCFKCGEEGHMSRECPQNTGSGFGDSRG 112
Query: 127 VDMSLTCYVCGHQGHLSYDC 146
S C+ CG +GH+S +C
Sbjct: 113 GARSKGCFKCGEEGHMSREC 132
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 98 SKRCYACHQAGHMAKECPGQT-AGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
SK C+ C + GHM++ECP T +G S C+ CG +GH+S +C
Sbjct: 50 SKGCFKCGEEGHMSRECPQNTGSGFGDSRGGARSKGCFKCGEEGHMSREC 99
>gi|407920706|gb|EKG13888.1| Zinc finger CCHC-type protein [Macrophomina phaseolina MS6]
Length = 347
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 49/125 (39%), Gaps = 24/125 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC---ATESVTCYNCSGQ 65
CYNC GH + +CP+ G CY C GH EC CYNC
Sbjct: 111 CYNCGGHGHIKVNCPEAPRGGG-----GQECYGCGQVGHRKSECPNGGGGGRACYNCGQY 165
Query: 66 GHVAKDCTVKS--------SIICYNCNSSGHFARNCPN--------DSSKRCYACHQAGH 109
GH DC S CYNC GH C N + C+ CH+ GH
Sbjct: 166 GHRKADCPNPSQGDNSGGGGRPCYNCGEIGHLKSECTNPINPATGGGDDRLCFKCHKVGH 225
Query: 110 MAKEC 114
MA++C
Sbjct: 226 MARDC 230
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 50/119 (42%), Gaps = 18/119 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT---------ESVTC 59
CYNC +GH + CP S D G G CY C GH EC + C
Sbjct: 159 CYNCGQYGHRKADCPNPSQGDNSGGG-GRPCYNCGEIGHLKSECTNPINPATGGGDDRLC 217
Query: 60 YNCSGQGHVAKDCTVKSSIICYNCNSSGH--FARNCPNDSSK-RCYACHQAGHMAKECP 115
+ C GH+A+DC C NC GH F + D SK C C + GH K CP
Sbjct: 218 FKCHKVGHMARDCN-----FCPNCEQEGHGFFECHLKKDYSKITCTVCKEKGHTKKRCP 271
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 41/95 (43%), Gaps = 9/95 (9%)
Query: 58 TCYNCSGQGHVAKDCTVK----SSIICYNCNSSGHFARNCPN--DSSKRCYACHQAGHMA 111
+CYNC G GH+ +C CY C GH CPN + CY C Q GH
Sbjct: 110 SCYNCGGHGHIKVNCPEAPRGGGGQECYGCGQVGHRKSECPNGGGGGRACYNCGQYGHRK 169
Query: 112 KECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+CP + G + CY CG GHL +C
Sbjct: 170 ADCPNPSQGDN---SGGGGRPCYNCGEIGHLKSEC 201
>gi|356574489|ref|XP_003555379.1| PREDICTED: uncharacterized protein LOC100783153 [Glycine max]
Length = 1410
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 21/131 (16%)
Query: 32 GDKVGIVCYKCNNYGHFARECATESV-----TCYNCSGQGHVAKDCT-----VKSSIICY 81
G K G C+ C H A+ C ++ C C +GH AK+C K ++ CY
Sbjct: 65 GMKPGESCFICKAMDHIAKLCPEKAEWEKNKICLRCRRRGHRAKNCPEVLDGAKDAMYCY 124
Query: 82 NCNSSGHFARNCPNDSSK------RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
NC +GH CP+ + C+ C+Q GH++K CP T G P+ C +
Sbjct: 125 NCGENGHSLTQCPHPLQEGGTKFAECFVCNQRGHLSKNCPQNTHGIYPK-----GGCCKI 179
Query: 136 CGHQGHLSYDC 146
CG HL+ DC
Sbjct: 180 CGGVTHLAKDC 190
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 25/132 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC------ATESVTCYNC 62
C+ C H CP+K+ + +C +C GH A+ C A +++ CYNC
Sbjct: 72 CFICKAMDHIAKLCPEKAEWEKNK-----ICLRCRRRGHRAKNCPEVLDGAKDAMYCYNC 126
Query: 63 SGQGHVAKDCTVKSS------IICYNCNSSGHFARNCPNDSSKR------CYACHQAGHM 110
GH C C+ CN GH ++NCP ++ C C H+
Sbjct: 127 GENGHSLTQCPHPLQEGGTKFAECFVCNQRGHLSKNCPQNTHGIYPKGGCCKICGGVTHL 186
Query: 111 AKECPGQTAGKS 122
AK+CP + GKS
Sbjct: 187 AKDCPDK--GKS 196
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 36/95 (37%), Gaps = 18/95 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYN------- 61
CYNC + GH CP G C+ CN GH ++ C + Y
Sbjct: 123 CYNCGENGHSLTQCPHPLQ---EGGTKFAECFVCNQRGHLSKNCPQNTHGIYPKGGCCKI 179
Query: 62 CSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND 96
C G H+AKDC K SG A N P D
Sbjct: 180 CGGVTHLAKDCPDKG--------KSGSVAANRPAD 206
>gi|255634708|gb|ACU17716.1| unknown [Glycine max]
Length = 389
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 72/155 (46%), Gaps = 31/155 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+NC + GH +C SA R CY C GH AR+C ++ C+ C GH
Sbjct: 23 CFNCGEEGHAAVNC----SAVKRKK----PCYVCGCLGHNARQC-SKVQDCFICKKDGHR 73
Query: 69 AKDC------TVKSSIICYNCNSSGHFARNCPNDSSK------RCYACHQAGHM-AKECP 115
AKDC T KS IC C +SGH +C ND S+ +CY C + GH+
Sbjct: 74 AKDCPEKHTSTSKSIAICLKCGNSGHDIFSCRNDYSQDDLKEIQCYVCKRLGHLCCVNTD 133
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
TAG+ ++CY CG GH+ C +Q
Sbjct: 134 DATAGE---------ISCYKCGQLGHMGLACLRLQ 159
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 48/124 (38%), Gaps = 21/124 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE-------SVTCYN 61
C+ C GH CP+K ++ + K +C KC N GH C + + CY
Sbjct: 64 CFICKKDGHRAKDCPEKHTSTS---KSIAICLKCGNSGHDIFSCRNDYSQDDLKEIQCYV 120
Query: 62 CSGQGH---VAKDCTVKSSIICYNCNSSGHFARNC--------PNDSSKRCYACHQAGHM 110
C GH V D I CY C GH C + C+ C + GH
Sbjct: 121 CKRLGHLCCVNTDDATAGEISCYKCGQLGHMGLACLRLQDEIASGATPSSCFKCGEEGHF 180
Query: 111 AKEC 114
A+EC
Sbjct: 181 AREC 184
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 40/104 (38%), Gaps = 15/104 (14%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHF----ARECATESV 57
+S S C C + GH +SC S D D I CY C GH + +
Sbjct: 84 TSKSIAICLKCGNSGHDIFSCRNDYSQD---DLKEIQCYVCKRLGHLCCVNTDDATAGEI 140
Query: 58 TCYNCSGQGHVAKDCTVKSSII--------CYNCNSSGHFARNC 93
+CY C GH+ C I C+ C GHFAR C
Sbjct: 141 SCYKCGQLGHMGLACLRLQDEIASGATPSSCFKCGEEGHFAREC 184
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
I CY C GH +C + A G C+KC GHFAREC T S+ SG+G
Sbjct: 140 ISCYKCGQLGHMGLACLRLQDEIASG-ATPSSCFKCGEEGHFAREC-TSSINFPPQSGKG 197
Query: 67 H 67
+
Sbjct: 198 N 198
>gi|409079955|gb|EKM80316.1| hypothetical protein AGABI1DRAFT_14624, partial [Agaricus bisporus
var. burnettii JB137-S8]
gi|426198281|gb|EKV48207.1| hypothetical protein AGABI2DRAFT_43852, partial [Agaricus bisporus
var. bisporus H97]
Length = 130
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 56/129 (43%), Gaps = 28/129 (21%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCPN 95
C+KC N GH A C++E CYNC GH + C ++ CY+C GH CP+
Sbjct: 5 CFKCGNLGHIAENCSSEQRLCYNCRQAGHESSACPSPRTVATKQCYSCGGVGHIQAECPS 64
Query: 96 -----DSSKRCYACHQAGHMAKEC----------------PGQTAGKSPEPVVDMSLTCY 134
+++CY C + GH A+ C PG+ S P V CY
Sbjct: 65 LRVQQGGNQKCYNCGRFGHFARSCTSGSGGGAGFASRAPPPGRGLNTSTLPPVK----CY 120
Query: 135 VCGHQGHLS 143
CG H++
Sbjct: 121 RCGGPNHMA 129
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND---SSKRCYACHQAGHMAKECP 115
C+ C GH+A++C+ + + CYNC +GH + CP+ ++K+CY+C GH+ ECP
Sbjct: 5 CFKCGNLGHIAENCSSEQRL-CYNCRQAGHESSACPSPRTVATKQCYSCGGVGHIQAECP 63
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ + CY CG GH + C
Sbjct: 64 SLRVQQ------GGNQKCYNCGRFGHFARSC 88
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 45/118 (38%), Gaps = 14/118 (11%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV----- 57
S+ CYNC GH +CP + + CY C GH EC + V
Sbjct: 19 SSEQRLCYNCRQAGHESSACPSPRTVATK------QCYSCGGVGHIQAECPSLRVQQGGN 72
Query: 58 -TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFAR--NCPNDSSKRCYACHQAGHMAK 112
CYNC GH A+ CT S + + R N +CY C HMAK
Sbjct: 73 QKCYNCGRFGHFARSCTSGSGGGAGFASRAPPPGRGLNTSTLPPVKCYRCGGPNHMAK 130
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
C+ C + GH A NC ++ + CY C QAGH + CP P + CY CG
Sbjct: 5 CFKCGNLGHIAENCSSEQ-RLCYNCRQAGHESSACP--------SPRTVATKQCYSCGGV 55
Query: 140 GHLSYDCKLVQ 150
GH+ +C ++
Sbjct: 56 GHIQAECPSLR 66
>gi|304367670|gb|ADM26640.1| vasa-like protein [Branchiostoma floridae]
Length = 785
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 15/75 (20%)
Query: 80 CYNCNSSGHFARNCPNDS--------SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSL 131
C+ C GHF+R CP S+ C+ C + GHM++ECP G S
Sbjct: 77 CFKCGEEGHFSRECPKGGGGRGGGGGSRACFKCGEEGHMSRECPSAGGGGG-------SR 129
Query: 132 TCYVCGHQGHLSYDC 146
CY CG +GH++ DC
Sbjct: 130 ACYKCGEEGHMARDC 144
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 16/81 (19%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN--- 95
C+KC GHF+REC S C+ C GH +R CP+
Sbjct: 77 CFKCGEEGHFSRECPKGG------------GGRGGGGGSRACFKCGEEGHMSRECPSAGG 124
Query: 96 -DSSKRCYACHQAGHMAKECP 115
S+ CY C + GHMA++CP
Sbjct: 125 GGGSRACYKCGEEGHMARDCP 145
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-----ESVTCYNCS 63
C+ C + GH+ CP K G C+KC GH +REC + S CY C
Sbjct: 77 CFKCGEEGHFSRECP-KGGGGRGGGGGSRACFKCGEEGHMSRECPSAGGGGGSRACYKCG 135
Query: 64 GQGHVAKDC 72
+GH+A+DC
Sbjct: 136 EEGHMARDC 144
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Query: 80 CYNCNSSGHFARNCPNDS------SKRCYACHQAGHMAKECP 115
C+ C GHF+R CPN K C+ C + GHM +CP
Sbjct: 235 CFKCGEDGHFSRECPNSQGGGGGGKKGCFRCGEEGHMVADCP 276
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 101 CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C+ C + GH ++ECP S C+ CG +GH+ DC
Sbjct: 235 CFKCGEDGHFSRECP-----NSQGGGGGGKKGCFRCGEEGHMVADC 275
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 14/61 (22%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C+KC GHF+REC ++ C+ C GH +CPN +
Sbjct: 235 CFKCGEDGHFSRECPN--------------SQGGGGGGKKGCFRCGEEGHMVADCPNPDT 280
Query: 99 K 99
+
Sbjct: 281 R 281
>gi|160948185|emb|CAL91031.1| DEAD box helicase [Macrostomum lignano]
Length = 929
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 79 ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
+CY C SGHFAR CPN + C+ C + GH++ +CP AG P
Sbjct: 391 VCYKCKQSGHFARECPNADACACFRCKETGHISADCPNVAAGDIP 435
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 38 VCYKCNNYGHFARECA-TESVTCYNCSGQGHVAKDC 72
VCYKC GHFAREC ++ C+ C GH++ DC
Sbjct: 391 VCYKCKQSGHFARECPNADACACFRCKETGHISADC 426
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 13/66 (19%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQT 118
CY C GH A++C + C+ C +GH + +CPN + A + PG +
Sbjct: 392 CYKCKQSGHFARECPNADACACFRCKETGHISADCPNVA-------------AGDIPGAS 438
Query: 119 AGKSPE 124
PE
Sbjct: 439 TAHMPE 444
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 11/46 (23%)
Query: 101 CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C Q+GH A+ECP A C+ C GH+S DC
Sbjct: 392 CYKCKQSGHFARECPNADA-----------CACFRCKETGHISADC 426
>gi|58258751|ref|XP_566788.1| hypothetical protein CNA05020 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134106947|ref|XP_777786.1| hypothetical protein CNBA4840 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260484|gb|EAL23139.1| hypothetical protein CNBA4840 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222925|gb|AAW40969.1| hypothetical protein CNA05020 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1641
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 13/71 (18%)
Query: 80 CYNCNSSGHFARNCPND----SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
C++C +GH AR CP+ S C+ C Q GHMA+ECP G C+
Sbjct: 656 CHHCGKTGHIARMCPDTGYSGSPNDCFRCQQPGHMARECPNTFGGGD---------ACFK 706
Query: 136 CGHQGHLSYDC 146
CG GH + +C
Sbjct: 707 CGQPGHFAREC 717
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 59 CYNCSGQGHVAKDCT----VKSSIICYNCNSSGHFARNCPND--SSKRCYACHQAGHMAK 112
C++C GH+A+ C S C+ C GH AR CPN C+ C Q GH A+
Sbjct: 656 CHHCGKTGHIARMCPDTGYSGSPNDCFRCQQPGHMARECPNTFGGGDACFKCGQPGHFAR 715
Query: 113 ECP 115
ECP
Sbjct: 716 ECP 718
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 35/87 (40%), Gaps = 23/87 (26%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGH 67
+C++C GH CP + + D C++C GH AREC N G G
Sbjct: 655 ECHHCGKTGHIARMCPDTGYSGSPND-----CFRCQQPGHMARECP-------NTFGGGD 702
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCP 94
C+ C GHFAR CP
Sbjct: 703 A-----------CFKCGQPGHFARECP 718
Score = 38.9 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC 52
S S C+ C GH CP G C+KC GHFAREC
Sbjct: 675 SGSPNDCFRCQQPGHMARECPNTFGG-------GDACFKCGQPGHFAREC 717
>gi|321249525|ref|XP_003191481.1| translation initiation factor IF-2 [Cryptococcus gattii WM276]
gi|317457948|gb|ADV19694.1| Translation initiation factor IF-2, putative [Cryptococcus gattii
WM276]
Length = 1629
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 13/71 (18%)
Query: 80 CYNCNSSGHFARNCPND----SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
C++C +GH AR CP+ S C+ C Q GHMA+ECP G C+
Sbjct: 722 CHHCGKTGHIARMCPDSGYSGSINDCFRCQQPGHMARECPNTPGGGD---------VCFK 772
Query: 136 CGHQGHLSYDC 146
CG GH + +C
Sbjct: 773 CGQAGHFAREC 783
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 59 CYNCSGQGHVAKDCT---VKSSI-ICYNCNSSGHFARNCPND--SSKRCYACHQAGHMAK 112
C++C GH+A+ C SI C+ C GH AR CPN C+ C QAGH A+
Sbjct: 722 CHHCGKTGHIARMCPDSGYSGSINDCFRCQQPGHMARECPNTPGGGDVCFKCGQAGHFAR 781
Query: 113 ECP 115
ECP
Sbjct: 782 ECP 784
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 39 CYKCNNYGHFARECATESVT-----CYNCSGQGHVAKDC--TVKSSIICYNCNSSGHFAR 91
C+ C GH AR C + C+ C GH+A++C T +C+ C +GHFAR
Sbjct: 722 CHHCGKTGHIARMCPDSGYSGSINDCFRCQQPGHMARECPNTPGGGDVCFKCGQAGHFAR 781
Query: 92 NCP 94
CP
Sbjct: 782 ECP 784
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC 52
S S C+ C GH CP G VC+KC GHFAREC
Sbjct: 741 SGSINDCFRCQQPGHMARECPNTPGG-------GDVCFKCGQAGHFAREC 783
>gi|356547869|ref|XP_003542327.1| PREDICTED: uncharacterized protein LOC100780476 [Glycine max]
Length = 529
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 72/155 (46%), Gaps = 31/155 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+NC + GH +C SA R CY C GH AR+C ++ C+ C GH
Sbjct: 163 CFNCGEEGHAAVNC----SAVKRKK----PCYVCGCLGHNARQC-SKVQDCFICKKGGHR 213
Query: 69 AKDC------TVKSSIICYNCNSSGHFARNCPNDSSK------RCYACHQAGHM-AKECP 115
AKDC T KS IC C +SGH +C ND S+ +CY C + GH+
Sbjct: 214 AKDCPEKHTSTSKSIAICLKCGNSGHDIFSCRNDYSQDDLKEIQCYVCKRLGHLCCVNTD 273
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
TAG+ ++CY CG GH+ C +Q
Sbjct: 274 DATAGE---------ISCYKCGQLGHMGLACLRLQ 299
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 48/124 (38%), Gaps = 21/124 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE-------SVTCYN 61
C+ C GH CP+K ++ + K +C KC N GH C + + CY
Sbjct: 204 CFICKKGGHRAKDCPEKHTSTS---KSIAICLKCGNSGHDIFSCRNDYSQDDLKEIQCYV 260
Query: 62 CSGQGH---VAKDCTVKSSIICYNCNSSGHFARNC--------PNDSSKRCYACHQAGHM 110
C GH V D I CY C GH C + C+ C + GH
Sbjct: 261 CKRLGHLCCVNTDDATAGEISCYKCGQLGHMGLACLRLQDEIASGATPSSCFKCGEEGHF 320
Query: 111 AKEC 114
A+EC
Sbjct: 321 AREC 324
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 40/104 (38%), Gaps = 15/104 (14%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHF----ARECATESV 57
+S S C C + GH +SC S D D I CY C GH + +
Sbjct: 224 TSKSIAICLKCGNSGHDIFSCRNDYSQD---DLKEIQCYVCKRLGHLCCVNTDDATAGEI 280
Query: 58 TCYNCSGQGHVAKDCTVKSSII--------CYNCNSSGHFARNC 93
+CY C GH+ C I C+ C GHFAR C
Sbjct: 281 SCYKCGQLGHMGLACLRLQDEIASGATPSSCFKCGEEGHFAREC 324
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
I CY C GH +C + A G C+KC GHFAREC T S+ SG+G
Sbjct: 280 ISCYKCGQLGHMGLACLRLQDEIASG-ATPSSCFKCGEEGHFAREC-TSSINFPPQSGKG 337
Query: 67 H 67
+
Sbjct: 338 N 338
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 35/77 (45%), Gaps = 17/77 (22%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----------ATES 56
IQCY C GH C A A G+ I CYKC GH C AT S
Sbjct: 256 IQCYVCKRLGHL--CCVNTDDATA-GE---ISCYKCGQLGHMGLACLRLQDEIASGATPS 309
Query: 57 VTCYNCSGQGHVAKDCT 73
+C+ C +GH A++CT
Sbjct: 310 -SCFKCGEEGHFARECT 325
>gi|145527971|ref|XP_001449785.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417374|emb|CAK82388.1| unnamed protein product [Paramecium tetraurelia]
Length = 786
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 18/101 (17%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
+ S + C C HY CP +C+KCN GH A++C E C+ C
Sbjct: 124 AESKVTCRFCLG-DHYYLKCPNS------------LCFKCNQAGHMAKDCDVEGFKCHRC 170
Query: 63 SGQGHVAKDCTVKS---SIICYNCNSSGHFARNCPNDSSKR 100
+ +GH +KDC K ++C NC GH NC + K+
Sbjct: 171 NKKGHKSKDCNDKQRLKDLLCINCQERGHL--NCFSKGYKK 209
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 45/118 (38%), Gaps = 41/118 (34%)
Query: 38 VCYKCNNYGHFAREC----ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
VC +C GHF + C A VTC C G H+ C
Sbjct: 105 VCRRCKKPGHFEKWCVEDIAESKVTCRFCLGD----------------------HYYLKC 142
Query: 94 PNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
PN C+ C+QAGHMAK+C + C+ C +GH S DC Q+
Sbjct: 143 PN---SLCFKCNQAGHMAKDCDVE------------GFKCHRCNKKGHKSKDCNDKQR 185
>gi|255539441|ref|XP_002510785.1| actin depolymerizing factor, putative [Ricinus communis]
gi|223549900|gb|EEF51387.1| actin depolymerizing factor, putative [Ricinus communis]
Length = 498
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 21/131 (16%)
Query: 32 GDKVGIVCYKCNNYGHFARECATESV-----TCYNCSGQGHVAKDCTVKSS-----IICY 81
G K G C+ C H A+ C ++ C C +GH K C K +CY
Sbjct: 73 GMKPGESCFICKAKDHIAKLCPQKAEWERNKICLLCRQRGHSLKRCPNKKDENVDRKLCY 132
Query: 82 NCNSSGHFARNCP----NDSSK--RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
NC +GH NCP N +K C+ C+++GH++K+CP T G P+ C +
Sbjct: 133 NCGETGHSLSNCPQPLKNGGTKYANCFICNESGHLSKDCPQNTRGIYPK-----GGCCKI 187
Query: 136 CGHQGHLSYDC 146
CG HL+ DC
Sbjct: 188 CGGVTHLARDC 198
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 52/125 (41%), Gaps = 23/125 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA------TESVTCYNC 62
C+ C H CPQK+ + +C C GH + C + CYNC
Sbjct: 80 CFICKAKDHIAKLCPQKAEWERNK-----ICLLCRQRGHSLKRCPNKKDENVDRKLCYNC 134
Query: 63 SGQGHVAKDCT--VKSSII----CYNCNSSGHFARNCPNDSSKR------CYACHQAGHM 110
GH +C +K+ C+ CN SGH +++CP ++ C C H+
Sbjct: 135 GETGHSLSNCPQPLKNGGTKYANCFICNESGHLSKDCPQNTRGIYPKGGCCKICGGVTHL 194
Query: 111 AKECP 115
A++CP
Sbjct: 195 ARDCP 199
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 55/144 (38%), Gaps = 29/144 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-------ATESVTCYN 61
C C GH CP K D D+ +CY C GH C T+ C+
Sbjct: 105 CLLCRQRGHSLKRCPNKK--DENVDRK--LCYNCGETGHSLSNCPQPLKNGGTKYANCFI 160
Query: 62 CSGQGHVAKDCTVKSSII------CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
C+ GH++KDC + I C C H AR+CP + A +G + ++
Sbjct: 161 CNESGHLSKDCPQNTRGIYPKGGCCKICGGVTHLARDCPEKGKRGSLAA--SGEVIEKEE 218
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQ 139
QT LT ++ G +
Sbjct: 219 RQTP----------KLTKFISGDE 232
>gi|440471988|gb|ELQ40888.1| zinc knuckle domain-containing protein [Magnaporthe oryzae Y34]
gi|440479225|gb|ELQ60008.1| zinc knuckle domain-containing protein [Magnaporthe oryzae P131]
Length = 182
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS---KRCYACHQAGHMAKEC 114
TCY+C G GH+++DC S CYNC +GHF+R+C S+ K CY C Q GH+ EC
Sbjct: 122 TCYSCGGVGHMSRDCVNGSK--CYNCGETGHFSRDCSKRSTTGEKMCYKCQQPGHVQAEC 179
Query: 115 P 115
P
Sbjct: 180 P 180
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCP 94
CY C GH +R+C S CYNC GH ++DC+ +S+ +CY C GH CP
Sbjct: 122 TCYSCGGVGHMSRDCVNGS-KCYNCGETGHFSRDCSKRSTTGEKMCYKCQQPGHVQAECP 180
Query: 95 ND 96
N+
Sbjct: 181 NN 182
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 15/68 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT----CYNCSG 64
CY+C GH C G CY C GHF+R+C+ S T CY C
Sbjct: 123 CYSCGGVGHMSRDCVN-----------GSKCYNCGETGHFSRDCSKRSTTGEKMCYKCQQ 171
Query: 65 QGHVAKDC 72
GHV +C
Sbjct: 172 PGHVQAEC 179
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC 52
+CYNC + GH+ C ++S+ G+K +CYKC GH EC
Sbjct: 141 KCYNCGETGHFSRDCSKRSTT---GEK---MCYKCQQPGHVQAEC 179
>gi|242041063|ref|XP_002467926.1| hypothetical protein SORBIDRAFT_01g036505 [Sorghum bicolor]
gi|241921780|gb|EER94924.1| hypothetical protein SORBIDRAFT_01g036505 [Sorghum bicolor]
Length = 155
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 59/131 (45%), Gaps = 25/131 (19%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSG 64
S I C+NC + GHY + CP+K S+ G + C K ARE +TC+ C
Sbjct: 25 SKITCFNCHEEGHYAHGCPRKKSSGELGLH-DVACPK----KKPARELELCDITCFTCHK 79
Query: 65 QGHVA----KDCTVK--------SSIICYNCNSSGHFARNCPND--------SSKRCYAC 104
+GH + K+C K S +IC+ C++ GH+ CP S C C
Sbjct: 80 KGHKSNTCPKNCPKKGRCGELKLSDVICFKCHNKGHYMNGCPEKKPLGELELSDVICLKC 139
Query: 105 HQAGHMAKECP 115
H+ GH CP
Sbjct: 140 HEKGHYTYSCP 150
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Query: 70 KDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDM 129
K + S I C+NC+ GH+A CP S H CP + + E + D
Sbjct: 19 KAAMLASKITCFNCHEEGHYAHGCPRKKSSGELGLHDVA-----CPKKKPARELE-LCD- 71
Query: 130 SLTCYVCGHQGHLSYDC 146
+TC+ C +GH S C
Sbjct: 72 -ITCFTCHKKGHKSNTC 87
>gi|307196503|gb|EFN78044.1| ATP-dependent RNA helicase glh-4 [Harpegnathos saltator]
Length = 125
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 21/125 (16%)
Query: 39 CYKCNNYGHFARECAT----ESVTCYNCSGQGHVAKDCTVKSS----IICYNCNSSGHFA 90
C C GH + C ++ C NC GH +++C SS +IC NCN GH A
Sbjct: 2 CQICLKPGHSVQNCLLYRNQPNIICQNCQRSGHSSRECRSNSSNINTLICRNCNKMGHVA 61
Query: 91 RNC-------PNDSSKRCYACHQAGHMAKEC-PGQTAGKSPEPVVDMSLTCYVCGHQGHL 142
RNC S + C C++ GH+ +C Q A PV+ C VCG GH
Sbjct: 62 RNCYAHSNYNTTLSEEICQWCNRRGHLVSQCRERQIAKNLSRPVI-----CQVCGKSGHK 116
Query: 143 SYDCK 147
+ DC+
Sbjct: 117 ASDCR 121
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 41/106 (38%), Gaps = 20/106 (18%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES--------V 57
I C NC GH C SS + ++C CN GH AR C S
Sbjct: 23 NIICQNCQRSGHSSRECRSNSS-----NINTLICRNCNKMGHVARNCYAHSNYNTTLSEE 77
Query: 58 TCYNCSGQGHVAKDC-------TVKSSIICYNCNSSGHFARNCPND 96
C C+ +GH+ C + +IC C SGH A +C D
Sbjct: 78 ICQWCNRRGHLVSQCRERQIAKNLSRPVICQVCGKSGHKASDCRED 123
>gi|167379639|ref|XP_001735220.1| zinc finger protein cchc domain containing protein [Entamoeba
dispar SAW760]
gi|165902889|gb|EDR28598.1| zinc finger protein cchc domain containing protein, putative
[Entamoeba dispar SAW760]
Length = 164
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 47 HFARECATESVTCYNCSGQGHVAKDCTVKS---SIICYNCNSSGHFARNCPNDSSKR--- 100
H+ R+ + TC+ C GH K+C K+ ICYNC S H R+CP + +
Sbjct: 7 HYNRD---KDKTCFYCRQPGHCLKNCPKKAKGEDSICYNCGSHDHILRDCPEPRTGKLAF 63
Query: 101 --CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
C+ CHQ GH++++CP G P+ C CG H + DC +K
Sbjct: 64 STCFVCHQMGHISRDCPNNPKGIYPQ-----GGGCRYCGDVNHFAKDCPNKRKK 112
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 18/116 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------TCYNC 62
C+ C GH +CP+K+ + +CY C ++ H R+C TC+ C
Sbjct: 16 CFYCRQPGHCLKNCPKKAKGEDS------ICYNCGSHDHILRDCPEPRTGKLAFSTCFVC 69
Query: 63 SGQGHVAKDCTVKSSII------CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAK 112
GH+++DC I C C HFA++CPN K+ Q +++K
Sbjct: 70 HQMGHISRDCPNNPKGIYPQGGGCRYCGDVNHFAKDCPNKRKKQTGDDDQDDYISK 125
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 15/123 (12%)
Query: 38 VCYKCNNYGHFARECAT----ESVTCYNCSGQGHVAKDCTVKSS-----IICYNCNSSGH 88
C+ C GH + C E CYNC H+ +DC + C+ C+ GH
Sbjct: 15 TCFYCRQPGHCLKNCPKKAKGEDSICYNCGSHDHILRDCPEPRTGKLAFSTCFVCHQMGH 74
Query: 89 FARNCPNDSSK------RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHL 142
+R+CPN+ C C H AK+CP + ++ + D ++ +G
Sbjct: 75 ISRDCPNNPKGIYPQGGGCRYCGDVNHFAKDCPNKRKKQTGDDDQDDYISKRDVEEKGFK 134
Query: 143 SYD 145
S D
Sbjct: 135 SGD 137
>gi|87162498|gb|ABD28293.1| RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger,
CCHC-type; Peptidase aspartic, active site;
Retrotransposon gag protein [Medicago truncatula]
Length = 912
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 31 RGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFA 90
+ D V IVC+ C GH + E C C +GHV DC ++ I+C+NCN GH +
Sbjct: 238 KKDAVEIVCFNCGEKGHKSNVYPEEIKKCVRCGKKGHVVADCN-RTDIVCFNCNGEGHIS 296
Query: 91 RNC 93
C
Sbjct: 297 SQC 299
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
I C+NC + GH P++ C +C GH +C + C+NC+G+G
Sbjct: 244 IVCFNCGEKGHKSNVYPEEIKK----------CVRCGKKGHVVADCNRTDIVCFNCNGEG 293
Query: 67 HVAKDCT 73
H++ CT
Sbjct: 294 HISSQCT 300
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 13/69 (18%)
Query: 78 IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCG 137
I+C+NC GH + P + K+C C + GH+ +C + C+ C
Sbjct: 244 IVCFNCGEKGHKSNVYP-EEIKKCVRCGKKGHVVADCN------------RTDIVCFNCN 290
Query: 138 HQGHLSYDC 146
+GH+S C
Sbjct: 291 GEGHISSQC 299
>gi|9955400|dbj|BAB12216.1| vasa homolog [Ciona savignyi]
Length = 688
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 53 ATESVTCYNCSGQGHVAKDC----TVKSSIICYNCNSSGHFARNCPNDSSKR----CYAC 104
++ S C+ C +GH++++C C+ C GH +R CP C+ C
Sbjct: 102 SSRSKGCFKCGEEGHMSRECPQGGGGGRGSGCFKCGEEGHMSRECPQGGGGGRGSGCFKC 161
Query: 105 HQAGHMAKECPGQTAGKSPE 124
+ GHM++ECP T+G+ E
Sbjct: 162 GEEGHMSRECPRNTSGEGGE 181
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 11/71 (15%)
Query: 80 CYNCNSSGHFARNCPNDSSKR----CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
C+ C GH +R CP C+ C + GHM++ECP G C+
Sbjct: 108 CFKCGEEGHMSRECPQGGGGGRGSGCFKCGEEGHMSRECPQGGGGGR-------GSGCFK 160
Query: 136 CGHQGHLSYDC 146
CG +GH+S +C
Sbjct: 161 CGEEGHMSREC 171
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-----ATESVTCYNCSGQGHVAKDC----TVKSSIICY 81
RG C+KC GH +REC C+ C +GH++++C C+
Sbjct: 100 RGSSRSKGCFKCGEEGHMSRECPQGGGGGRGSGCFKCGEEGHMSRECPQGGGGGRGSGCF 159
Query: 82 NCNSSGHFARNCPNDSS 98
C GH +R CP ++S
Sbjct: 160 KCGEEGHMSRECPRNTS 176
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 10/80 (12%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-----ATESV 57
S+ + C+ C + GH CPQ C+KC GH +REC
Sbjct: 102 SSRSKGCFKCGEEGHMSRECPQGGGGGRGSG-----CFKCGEEGHMSRECPQGGGGGRGS 156
Query: 58 TCYNCSGQGHVAKDCTVKSS 77
C+ C +GH++++C +S
Sbjct: 157 GCFKCGEEGHMSRECPRNTS 176
Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
SK C+ C + GHM++ECP G C+ CG +GH+S +C
Sbjct: 105 SKGCFKCGEEGHMSRECPQGGGGGR-------GSGCFKCGEEGHMSREC 146
>gi|256090142|ref|XP_002581072.1| cellular nucleic acid binding protein [Schistosoma mansoni]
gi|353232302|emb|CCD79657.1| putative cellular nucleic acid binding protein [Schistosoma
mansoni]
Length = 153
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 63/156 (40%), Gaps = 55/156 (35%)
Query: 39 CYKCNNYGHFARECATE------------------------------SVTCYNCSGQGHV 68
C+KC GH+AR+C C+NC G GH
Sbjct: 5 CFKCGRPGHYARDCQAAPRGGGRGGGGGYRGGRGGGGGRDRDNNDGRRDKCFNCGGTGHF 64
Query: 69 AKDCT---------------VKSSIICYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAK 112
A+DCT CY+C SGH RNCPN++S CY C++ GH A+
Sbjct: 65 ARDCTNDGQRGDSGYNGGGGGGGGGRCYSCGESGHIVRNCPNNNSDTLCYRCNKYGHFAR 124
Query: 113 ECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+C ++ G P+ CY C GH++ C +
Sbjct: 125 DCT-ESGGSGPQ--------CYKCHGYGHIASRCNV 151
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 17/110 (15%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGH 67
+C+NC GH+ C RGD G+ CY+C GH
Sbjct: 54 KCFNCGGTGHFARDCTNDGQ---RGDS-----------GYNGGGGGGGGGRCYSCGESGH 99
Query: 68 VAKDC-TVKSSIICYNCNSSGHFARNCPND--SSKRCYACHQAGHMAKEC 114
+ ++C S +CY CN GHFAR+C S +CY CH GH+A C
Sbjct: 100 IVRNCPNNNSDTLCYRCNKYGHFARDCTESGGSGPQCYKCHGYGHIASRC 149
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 11/72 (15%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CYNCSG 64
+CY+C + GH +CP +S +CY+CN YGHFAR+C + CY C G
Sbjct: 90 RCYSCGESGHIVRNCPNNNSD--------TLCYRCNKYGHFARDCTESGGSGPQCYKCHG 141
Query: 65 QGHVAKDCTVKS 76
GH+A C V++
Sbjct: 142 YGHIASRCNVEA 153
>gi|390343449|ref|XP_785058.3| PREDICTED: DNA-binding protein HEXBP-like [Strongylocentrotus
purpuratus]
Length = 257
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 39 CYKCNNYGHFAREC--ATESVTCYNCSGQGHVAKDC--TVKSSIICYNCNSSGHFARNCP 94
CYKCN +GH AR+C E CY C GH++ C T ++ CYNC GH CP
Sbjct: 51 CYKCNQFGHRARDCQDTAEEDLCYRCGEPGHISSGCPNTDVENVKCYNCGKKGHMKNVCP 110
Query: 95 NDSSKRCYACHQAGHMAKECPGQTAG 120
+ K CY C + H+ +CP G
Sbjct: 111 D--GKACYVCGSSEHVKAQCPEAPQG 134
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 63/184 (34%), Gaps = 68/184 (36%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA---TESVTCYNCS 63
+CY C FGH C + D +CY+C GH + C E+V CYNC
Sbjct: 49 TRCYKCNQFGHRARDCQDTAEED--------LCYRCGEPGHISSGCPNTDVENVKCYNCG 100
Query: 64 GQGHVAKDCTVKSSIICYNCNSSGHFARNCP-------NDSSKR---------------- 100
+GH+ C CY C SS H CP N R
Sbjct: 101 KKGHMKNVCP--DGKACYVCGSSEHVKAQCPEAPQGGDNRDYNRGVGGGGRDNRDYGGRG 158
Query: 101 ------------------CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHL 142
CY C++ GH A CP ++TCY C +GH
Sbjct: 159 GGGGGREYGRGGGGGGSACYICNEEGHQAYMCP--------------NMTCYNCDGKGHK 204
Query: 143 SYDC 146
+ DC
Sbjct: 205 ARDC 208
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 37/84 (44%), Gaps = 26/84 (30%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDC------------------------T 73
CY CN GH A C ++TCYNC G+GH A+DC
Sbjct: 176 ACYICNEEGHQAYMCP--NMTCYNCDGKGHKARDCPSGRQDRQEFRGGVGGGGGGGYRGG 233
Query: 74 VKSSIICYNCNSSGHFARNCPNDS 97
++ CYNC GHFAR C ++
Sbjct: 234 IQRDSKCYNCGEMGHFARECSRNA 257
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 57/179 (31%), Gaps = 48/179 (26%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYN 61
+ ++CYNC GH + CP G CY C + H +C N
Sbjct: 89 TDVENVKCYNCGKKGHMKNVCPD-----------GKACYVCGSSEHVKAQCPEAPQGGDN 137
Query: 62 ------CSGQGHVAKD---------------CTVKSSIICYNCNSSGHFARNCPNDSSKR 100
G G +D CY CN GH A CPN +
Sbjct: 138 RDYNRGVGGGGRDNRDYGGRGGGGGGREYGRGGGGGGSACYICNEEGHQAYMCPNMT--- 194
Query: 101 CYACHQAGHMAKECPGQTAGKSP-------------EPVVDMSLTCYVCGHQGHLSYDC 146
CY C GH A++CP + + CY CG GH + +C
Sbjct: 195 CYNCDGKGHKARDCPSGRQDRQEFRGGVGGGGGGGYRGGIQRDSKCYNCGEMGHFAREC 253
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 34/116 (29%)
Query: 56 SVTCYNCSGQGHVAKDCT------------------------VKSSIICYNCNSSGHFAR 91
S C+ C GH+A++C+ CY CN GH AR
Sbjct: 3 SGACFKCGRGGHIARNCSEAGVDDGYSRHGGRDGGGGGGGGRSSRDTRCYKCNQFGHRAR 62
Query: 92 NCPNDSSKR-CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+C + + + CY C + GH++ CP ++ CY CG +GH+ C
Sbjct: 63 DCQDTAEEDLCYRCGEPGHISSGCPNTDV---------ENVKCYNCGKKGHMKNVC 109
>gi|331231943|ref|XP_003328634.1| hypothetical protein PGTG_10593 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309307624|gb|EFP84215.1| hypothetical protein PGTG_10593 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 153
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS-----KRCYACHQAGHMAK 112
C+ C GH+A+ C +S + CYNC SGH + +CPN + ++C+ C GH+A
Sbjct: 8 ACFKCGALGHLAEQCPAESRL-CYNCKQSGHESASCPNPRTGGVDGRQCFTCGGFGHLAA 66
Query: 113 ECP-GQTAGKSPEPVVDMSLT-CYVCGHQGHLSYDC 146
+CP T G V T CY CG GH+S C
Sbjct: 67 DCPSATTLGNRIAGVGSFGGTKCYTCGQFGHVSRSC 102
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 53/129 (41%), Gaps = 30/129 (23%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSS-----IICYNCNSSGHFARN 92
C+KC GH A +C ES CYNC GH + C + C+ C GH A +
Sbjct: 8 ACFKCGALGHLAEQCPAESRLCYNCKQSGHESASCPNPRTGGVDGRQCFTCGGFGHLAAD 67
Query: 93 CPNDSS-------------KRCYACHQAGHMAKEC------PGQTA------GKSPEPVV 127
CP+ ++ +CY C Q GH+++ C GQ A G P P
Sbjct: 68 CPSATTLGNRIAGVGSFGGTKCYTCGQFGHVSRSCNHSGNGVGQGAFQSRIGGYKPRPAP 127
Query: 128 DMSLTCYVC 136
+ CY C
Sbjct: 128 SQPVQCYKC 136
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S+ C+ C + GH A CP + S+ CY C Q+GH + CP G VD C+
Sbjct: 5 SNRACFKCGALGHLAEQCPAE-SRLCYNCKQSGHESASCPNPRTGG-----VD-GRQCFT 57
Query: 136 CGHQGHLSYDC 146
CG GHL+ DC
Sbjct: 58 CGGFGHLAADC 68
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 35/100 (35%), Gaps = 28/100 (28%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADAR----GDKVGIVCYKCNNYGHFAREC----------- 52
QC+ C FGH CP ++ R G G CY C +GH +R C
Sbjct: 54 QCFTCGGFGHLAADCPSATTLGNRIAGVGSFGGTKCYTCGQFGHVSRSCNHSGNGVGQGA 113
Query: 53 -------------ATESVTCYNCSGQGHVAKDCTVKSSII 79
++ V CY C G H A+ V I
Sbjct: 114 FQSRIGGYKPRPAPSQPVQCYKCQGMNHYARSGDVLPPPI 153
>gi|225431120|ref|XP_002266115.1| PREDICTED: glycine-rich protein 2b-like [Vitis vinifera]
Length = 241
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 51/117 (43%), Gaps = 30/117 (25%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV----CYKCNNYGHFARECATESVT------ 58
CYNC GH C ++++ G G CY C GH AR+C+ S
Sbjct: 121 CYNCGGTGHLARDCVRRNNGGGGGGSGGGGGGGGCYTCGQPGHLARDCSRPSGGGGGGGG 180
Query: 59 CYNCSGQGHVAKDCTVKSS--------------------IICYNCNSSGHFARNCPN 95
CYNC GH+A+DCT++S CYNC GHFAR CPN
Sbjct: 181 CYNCGDYGHLARDCTLESGSAGRFGGGGGGGGGRFGGGGGGCYNCGQEGHFARECPN 237
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 45/117 (38%), Gaps = 39/117 (33%)
Query: 38 VCYKCNNYGHFARECATES--------------VTCYNCSGQGHVAKDCTVKSSII---- 79
CY C GH AR+C + CY C GH+A+DC+ S
Sbjct: 120 ACYNCGGTGHLARDCVRRNNGGGGGGSGGGGGGGGCYTCGQPGHLARDCSRPSGGGGGGG 179
Query: 80 -CYNCNSSGHFARNCPNDSSK--------------------RCYACHQAGHMAKECP 115
CYNC GH AR+C +S CY C Q GH A+ECP
Sbjct: 180 GCYNCGDYGHLARDCTLESGSAGRFGGGGGGGGGRFGGGGGGCYNCGQEGHFARECP 236
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 47/117 (40%), Gaps = 27/117 (23%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSII-------------CYNCNSSGHFARNCPNDSSKR--- 100
CYNC G GH+A+DC +++ CY C GH AR+C S
Sbjct: 119 AACYNCGGTGHLARDCVRRNNGGGGGGSGGGGGGGGCYTCGQPGHLARDCSRPSGGGGGG 178
Query: 101 --CYACHQAGHMAKECPGQTAGKSPEPVVDMSLT---------CYVCGHQGHLSYDC 146
CY C GH+A++C ++ CY CG +GH + +C
Sbjct: 179 GGCYNCGDYGHLARDCTLESGSAGRFGGGGGGGGGRFGGGGGGCYNCGQEGHFAREC 235
>gi|168060692|ref|XP_001782328.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666187|gb|EDQ52848.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 188
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 58/132 (43%), Gaps = 22/132 (16%)
Query: 32 GDKVGIVCYKCNNYGHFARECATESV-------TCYNCSGQGHVAKDCT--VKSSII--C 80
G K G C+ C + H A+ C T+S C C GH K+C KS+ + C
Sbjct: 24 GMKPGEGCFLCKSKDHIAKHCPTKSEKDHRKNYMCLGCRMWGHTLKNCPSEFKSADVKLC 83
Query: 81 YNCNSSGHFARNCPN------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCY 134
YNC GH CPN + C+ C Q GH++K CP G P+ +C
Sbjct: 84 YNCGQPGHSLDKCPNPLKDGGSAFAECFLCKQRGHLSKNCPDNKNGIYPK-----GGSCK 138
Query: 135 VCGHQGHLSYDC 146
+C HL+ DC
Sbjct: 139 ICEQVTHLAKDC 150
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 20/130 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT-----CYNCS 63
C+ C H CP KS D R + +C C +GH + C +E + CYNC
Sbjct: 31 CFLCKSKDHIAKHCPTKSEKDHRKN---YMCLGCRMWGHTLKNCPSEFKSADVKLCYNCG 87
Query: 64 GQGHVAKDCT--VKSS----IICYNCNSSGHFARNCPNDSSK------RCYACHQAGHMA 111
GH C +K C+ C GH ++NCP++ + C C Q H+A
Sbjct: 88 QPGHSLDKCPNPLKDGGSAFAECFLCKQRGHLSKNCPDNKNGIYPKGGSCKICEQVTHLA 147
Query: 112 KECPGQTAGK 121
K+CP + +GK
Sbjct: 148 KDCPQKNSGK 157
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 41/106 (38%), Gaps = 26/106 (24%)
Query: 67 HVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK------RCYACHQAGHMAKEC------ 114
H + +K C+ C S H A++CP S K C C GH K C
Sbjct: 18 HPLRQAGMKPGEGCFLCKSKDHIAKHCPTKSEKDHRKNYMCLGCRMWGHTLKNCPSEFKS 77
Query: 115 -----------PGQTAGKSPEPVVDMS---LTCYVCGHQGHLSYDC 146
PG + K P P+ D C++C +GHLS +C
Sbjct: 78 ADVKLCYNCGQPGHSLDKCPNPLKDGGSAFAECFLCKQRGHLSKNC 123
>gi|405117876|gb|AFR92651.1| hypothetical protein CNAG_00520 [Cryptococcus neoformans var.
grubii H99]
Length = 1641
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 13/71 (18%)
Query: 80 CYNCNSSGHFARNCPN----DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
C++C +GH AR CP+ S C+ C Q GHMA+ECP G C+
Sbjct: 674 CHHCGKAGHIARICPDAGYSGSLDDCFRCQQPGHMARECPNPFGGGD---------ACFR 724
Query: 136 CGHQGHLSYDC 146
CG GH + +C
Sbjct: 725 CGQAGHFAREC 735
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 59 CYNCSGQGHVAKDCT----VKSSIICYNCNSSGHFARNCPN--DSSKRCYACHQAGHMAK 112
C++C GH+A+ C S C+ C GH AR CPN C+ C QAGH A+
Sbjct: 674 CHHCGKAGHIARICPDAGYSGSLDDCFRCQQPGHMARECPNPFGGGDACFRCGQAGHFAR 733
Query: 113 ECP 115
ECP
Sbjct: 734 ECP 736
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 23/87 (26%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGH 67
+C++C GH CP + + D C++C GH AREC N G G
Sbjct: 673 ECHHCGKAGHIARICPDAGYSGSLDD-----CFRCQQPGHMARECP-------NPFGGGD 720
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCP 94
C+ C +GHFAR CP
Sbjct: 721 A-----------CFRCGQAGHFARECP 736
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC 52
S S C+ C GH CP G C++C GHFAREC
Sbjct: 693 SGSLDDCFRCQQPGHMARECPNPFGG-------GDACFRCGQAGHFAREC 735
>gi|391333168|ref|XP_003740993.1| PREDICTED: uncharacterized protein LOC100904700 [Metaseiulus
occidentalis]
Length = 1180
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 39 CYKCNNYGHFARECA---TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFA--RNC 93
C+ C +GH A EC E CY C + H+AKDC S CY C +GH A R+C
Sbjct: 212 CFNCQKFGHLAHECKEGKAEGRRCYRCGKEDHIAKDCEASPS--CYVCGKNGHRADSRSC 269
Query: 94 P 94
P
Sbjct: 270 P 270
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 59 CYNCSGQGHVAKDCTVKSS--IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMA--KEC 114
C+NC GH+A +C + CY C H A++C ++S CY C + GH A + C
Sbjct: 212 CFNCQKFGHLAHECKEGKAEGRRCYRCGKEDHIAKDC--EASPSCYVCGKNGHRADSRSC 269
Query: 115 PGQ--TAGKSPEPVVDMS 130
P Q A K+ V+D +
Sbjct: 270 PAQREQAAKAQGKVMDAT 287
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 15/64 (23%)
Query: 80 CYNCNSSGHFARNCPNDSS--KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCG 137
C+NC GH A C + +RCY C + H+AK+C + S +CYVCG
Sbjct: 212 CFNCQKFGHLAHECKEGKAEGRRCYRCGKEDHIAKDC-------------EASPSCYVCG 258
Query: 138 HQGH 141
GH
Sbjct: 259 KNGH 262
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+NC FGH + C + G G CY+C H A++C S +CY C GH
Sbjct: 212 CFNCQKFGHLAHECKE-------GKAEGRRCYRCGKEDHIAKDCEA-SPSCYVCGKNGHR 263
Query: 69 A 69
A
Sbjct: 264 A 264
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 101 CYACHQAGHMAKECP-GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
C+ C + GH+A EC G+ G+ CY CG + H++ DC+
Sbjct: 212 CFNCQKFGHLAHECKEGKAEGRR----------CYRCGKEDHIAKDCE 249
>gi|167386232|ref|XP_001737676.1| cellular nucleic acid binding protein [Entamoeba dispar SAW760]
gi|165899446|gb|EDR26035.1| cellular nucleic acid binding protein, putative [Entamoeba dispar
SAW760]
Length = 388
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 63 SGQGHVAKDCTVKSSI--ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAG 120
+G V + ++ SI +C+ C GH R+CP + C+ C + GH+ K CP Q
Sbjct: 281 NGDTSVPEAASLNKSIQKVCFKCGKPGHIGRDCPQPDDRVCFHCGKPGHIGKNCPEQGVQ 340
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDC 146
+S + V TCY CG GH S DC
Sbjct: 341 ESTDQV-----TCYKCGQVGHKSIDC 361
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR------CYACHQAGHMAK 112
C+ C GH+ +DC +C++C GH +NCP + CY C Q GH +
Sbjct: 300 CFKCGKPGHIGRDCPQPDDRVCFHCGKPGHIGKNCPEQGVQESTDQVTCYKCGQVGHKSI 359
Query: 113 ECPGQTAG 120
+CP T G
Sbjct: 360 DCPENTDG 367
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 25/90 (27%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-------ATESVTCYN 61
C+ C GH CPQ D R VC+ C GH + C +T+ VTCY
Sbjct: 300 CFKCGKPGHIGRDCPQ---PDDR------VCFHCGKPGHIGKNCPEQGVQESTDQVTCYK 350
Query: 62 CSGQGHVAKDCTVKSSIICYNCNSSGHFAR 91
C GH + DC N+ G F R
Sbjct: 351 CGQVGHKSIDCPE---------NTDGGFKR 371
>gi|403370431|gb|EJY85077.1| Zinc knuckle family protein [Oxytricha trifallax]
Length = 1917
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 40/101 (39%), Gaps = 24/101 (23%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C+KC GH AREC + QG + S C+ CN GH AR+CPN
Sbjct: 1725 CFKCGQSGHMARECPNP-----DTRPQGGRGRGGPGGGSRACFKCNEEGHMARDCPNQDQ 1779
Query: 99 KR-------------------CYACHQAGHMAKECPGQTAG 120
+ C+ C Q GH A++C Q G
Sbjct: 1780 RGDDGGRGRGRGRGRGGDDRACFKCQQTGHQARDCTNQDDG 1820
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 23/90 (25%)
Query: 80 CYNCNSSGHFARNCPN---------------DSSKRCYACHQAGHMAKECPGQ------- 117
C+ C SGH AR CPN S+ C+ C++ GHMA++CP Q
Sbjct: 1725 CFKCGQSGHMARECPNPDTRPQGGRGRGGPGGGSRACFKCNEEGHMARDCPNQDQRGDDG 1784
Query: 118 -TAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C+ C GH + DC
Sbjct: 1785 GRGRGRGRGRGGDDRACFKCQQTGHQARDC 1814
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 33/92 (35%), Gaps = 26/92 (28%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGI------VCYKCNNYGHFARECATES----- 56
+C+ C GH CP + G G C+KCN GH AR+C +
Sbjct: 1724 ECFKCGQSGHMARECPNPDTRPQGGRGRGGPGGGSRACFKCNEEGHMARDCPNQDQRGDD 1783
Query: 57 ---------------VTCYNCSGQGHVAKDCT 73
C+ C GH A+DCT
Sbjct: 1784 GGRGRGRGRGRGGDDRACFKCQQTGHQARDCT 1815
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 79 ICYNCNSSGHFARNCPNDSSK 99
+CYNCN +GH AR+CP S K
Sbjct: 1554 LCYNCNETGHMARDCPTKSQK 1574
>gi|15229721|ref|NP_189945.1| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
gi|9967508|emb|CAC05633.1| putative protein [Arabidopsis thaliana]
gi|20466716|gb|AAM20675.1| putative protein [Arabidopsis thaliana]
gi|25084296|gb|AAN72214.1| putative protein [Arabidopsis thaliana]
gi|332644290|gb|AEE77811.1| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
Length = 551
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 56/140 (40%), Gaps = 36/140 (25%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHF----ARECATESVTCYNCSG 64
C C DFGH C + S + D + CY C ++GH + +V+CY C
Sbjct: 236 CLRCGDFGHDMILCKYEYSKE---DLKDVQCYICKSFGHLCCVEPGNSLSWAVSCYRCGQ 292
Query: 65 QGHVAKDC-------------------TVKSSIICYNCNSSGHFARNCPNDSS------- 98
GH C + + CY C GHFAR CPN SS
Sbjct: 293 LGHSGLACGRHYEESNENDSATPERLFNSREASECYRCGEEGHFARECPNSSSISTSHGR 352
Query: 99 ---KRCYACHQAGHMAKECP 115
CY C+ +GH A+ECP
Sbjct: 353 ESQTLCYRCNGSGHFARECP 372
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 58/139 (41%), Gaps = 38/139 (27%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-------------- 52
+QCY C FGH P S + A + CY+C GH C
Sbjct: 261 VQCYICKSFGHLCCVEPGNSLSWA------VSCYRCGQLGHSGLACGRHYEESNENDSAT 314
Query: 53 ------ATESVTCYNCSGQGHVAKDCTVKSSI----------ICYNCNSSGHFARNCPND 96
+ E+ CY C +GH A++C SSI +CY CN SGHFAR CPN
Sbjct: 315 PERLFNSREASECYRCGEEGHFARECPNSSSISTSHGRESQTLCYRCNGSGHFARECPNS 374
Query: 97 S--SKRCYACHQAGHMAKE 113
S SKR H +++
Sbjct: 375 SQVSKRDRETSTTSHKSRK 393
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 67/167 (40%), Gaps = 34/167 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE-------SVTCYN 61
CY C GH CP K ++G VC +C ++GH C E V CY
Sbjct: 210 CYICKKTGHRAKDCPDKYKNGSKG----AVCLRCGDFGHDMILCKYEYSKEDLKDVQCYI 265
Query: 62 CSGQGH---VAKDCTVKSSIICYNCNSSGH--------FARNCPNDSS-----------K 99
C GH V ++ ++ CY C GH + + NDS+
Sbjct: 266 CKSFGHLCCVEPGNSLSWAVSCYRCGQLGHSGLACGRHYEESNENDSATPERLFNSREAS 325
Query: 100 RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C + GH A+ECP ++ + +L CY C GH + +C
Sbjct: 326 ECYRCGEEGHFARECPNSSSISTSHGRESQTL-CYRCNGSGHFAREC 371
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 65/151 (43%), Gaps = 27/151 (17%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
+ CY+C + GH ++CP + K C+ C + H A++C ++ CY C G
Sbjct: 166 VSCYSCGEQGHTSFNCPTPT-------KRRKPCFICGSLEHGAKQC-SKGHDCYICKKTG 217
Query: 67 HVAKDCTVK-----SSIICYNCNSSGHFARNCPNDSSK------RCYACHQAGHMAKECP 115
H AKDC K +C C GH C + SK +CY C GH+ P
Sbjct: 218 HRAKDCPDKYKNGSKGAVCLRCGDFGHDMILCKYEYSKEDLKDVQCYICKSFGHLCCVEP 277
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G + + +++CY CG GH C
Sbjct: 278 GNS--------LSWAVSCYRCGQLGHSGLAC 300
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSS-ADARGDKVGIVCYKCNNYGHFARECATES 56
+S +CY C + GH+ CP SS + + G + +CY+CN GHFAREC S
Sbjct: 319 FNSREASECYRCGEEGHFARECPNSSSISTSHGRESQTLCYRCNGSGHFARECPNSS 375
>gi|238015158|gb|ACR38614.1| unknown [Zea mays]
Length = 240
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 38/116 (32%)
Query: 38 VCYKCNNYGHFARECATESVT----------------------CYNCSGQGHVAKDCT-V 74
CYKC GH AR+C + C+ C GH+A+DC+
Sbjct: 124 ACYKCGEPGHMARDCPSADGGGGYGGGGYGGGGYGGGGGGGGGCFKCGEPGHMARDCSSG 183
Query: 75 KSSIICYNCNSSGHFARNCPNDS---------------SKRCYACHQAGHMAKECP 115
CYNC +GH AR+CP+ + CY C +AGH+A++CP
Sbjct: 184 GGGGGCYNCGQAGHMARDCPSGGGGGGGRFGGGGGGGGDRSCYNCGEAGHIARDCP 239
>gi|358343690|ref|XP_003635931.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355501866|gb|AES83069.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 558
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 37 IVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND 96
IVC+KC GH + C + C+ C +GH DC + ++CYNC+ GH + C
Sbjct: 295 IVCFKCGEKGHKSNVCDRDEKKCFRCGKKGHTLADCK-RGDVVCYNCDEEGHISSQCRKP 353
Query: 97 SSKR 100
+ +R
Sbjct: 354 TYQR 357
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
+ + I C+ C + GH KS+ R +K C++C GH +C V CYNC
Sbjct: 291 APTEIVCFKCGEKGH-------KSNVCDRDEKK---CFRCGKKGHTLADCKRGDVVCYNC 340
Query: 63 SGQGHVAKDC 72
+GH++ C
Sbjct: 341 DEEGHISSQC 350
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 13/72 (18%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
+ I+C+ C GH + C D K+C+ C + GH +C + CY
Sbjct: 293 TEIVCFKCGEKGHKSNVCDRD-EKKCFRCGKKGHTLADCKRG------------DVVCYN 339
Query: 136 CGHQGHLSYDCK 147
C +GH+S C+
Sbjct: 340 CDEEGHISSQCR 351
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 7/99 (7%)
Query: 16 GHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVK 75
G Q S P+ SA A K + N+ R A + C+ C +GH + C +
Sbjct: 259 GKGQQSRPKPYSAPANKVK-----QRLNDERRPRRRDAPTEIVCFKCGEKGHKSNVCD-R 312
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
C+ C GH +C CY C + GH++ +C
Sbjct: 313 DEKKCFRCGKKGHTLADCKR-GDVVCYNCDEEGHISSQC 350
>gi|440803900|gb|ELR24783.1| zinc knuckle domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 351
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 39 CYKCNNYGHFARECATESV-TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
CYKC GHFAREC V TCY C GH+AKDC CY C SGH AR+C
Sbjct: 292 CYKCGVSGHFARECPKGDVKTCYKCGLDGHIAKDCDT-----CYACKKSGHQARDCTERP 346
Query: 98 SKRCY 102
R Y
Sbjct: 347 PPRPY 351
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 38 VCYKCNNYGHFARECAT-------ESVTCYNCSGQGHVAKDCT--VKSSIICYNCNSSGH 88
+C+KC YGH A C + + CY CSG+GH A C S ICY C GH
Sbjct: 145 LCFKCGGYGHIAVMCPSRQGAANSDEPPCYKCSGKGHRASMCPNLYLSRDICYRCGMPGH 204
Query: 89 FARNC 93
ARNC
Sbjct: 205 IARNC 209
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 31/67 (46%), Gaps = 16/67 (23%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
CY C SGHFAR CP K CY C GH+AK+C TCY C
Sbjct: 292 CYKCGVSGHFARECPKGDVKTCYKCGLDGHIAKDC----------------DTCYACKKS 335
Query: 140 GHLSYDC 146
GH + DC
Sbjct: 336 GHQARDC 342
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQT 118
CY C GH A++C CY C GH A++C CYAC ++GH A++C T
Sbjct: 292 CYKCGVSGHFARECPKGDVKTCYKCGLDGHIAKDCDT-----CYACKKSGHQARDC---T 343
Query: 119 AGKSPEP 125
P P
Sbjct: 344 ERPPPRP 350
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CY C GH+ CP+ GD CYKC GH A++C TCY C GH
Sbjct: 292 CYKCGVSGHFARECPK-------GDVK--TCYKCGLDGHIAKDCD----TCYACKKSGHQ 338
Query: 69 AKDCTVKSSIICY 81
A+DCT + Y
Sbjct: 339 ARDCTERPPPRPY 351
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 8/72 (11%)
Query: 51 ECATESVTCYNCSGQGHVAKDCTVKSSII------CYNCNSSGHFARNCPNDSSKR--CY 102
E C+ C G GH+A C + CY C+ GH A CPN R CY
Sbjct: 138 EAKRRKNLCFKCGGYGHIAVMCPSRQGAANSDEPPCYKCSGKGHRASMCPNLYLSRDICY 197
Query: 103 ACHQAGHMAKEC 114
C GH+A+ C
Sbjct: 198 RCGMPGHIARNC 209
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CYNCSGQ 65
C+ C +GH CP + A A D+ CYKC+ GH A C ++ CY C
Sbjct: 146 CFKCGGYGHIAVMCPSRQGA-ANSDEP--PCYKCSGKGHRASMCPNLYLSRDICYRCGMP 202
Query: 66 GHVAKDC 72
GH+A++C
Sbjct: 203 GHIARNC 209
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 15/86 (17%)
Query: 67 HVAKDCTVKSSIICYNCNSSGHFARNCP------NDSSKRCYACHQAGHMAKECPGQTAG 120
H D + +C+ C GH A CP N CY C GH A CP
Sbjct: 133 HDRDDEAKRRKNLCFKCGGYGHIAVMCPSRQGAANSDEPPCYKCSGKGHRASMCPNLYLS 192
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY CG GH++ +C
Sbjct: 193 RD---------ICYRCGMPGHIARNC 209
>gi|154273505|ref|XP_001537604.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150415212|gb|EDN10565.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 251
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 17/129 (13%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSG 64
+C NC GH +CP + S KV + C CN GH AR+C + + +C NC
Sbjct: 77 KCVNCGQMGHGSRACPDERSVVE---KVEVKCVNCNGMGHRARDCTEKRIDKFSCRNCGE 133
Query: 65 QGHVAKDCTVK---SSIICYNCNSS-----GHFARNC--PNDSSK-RCYACHQAGHMAKE 113
+GH++K+C ++ C NC + GH++R+C D +K +C C + GH +
Sbjct: 134 EGHISKECDKPRNLDTVTCRNCEEAFFAVVGHYSRDCTKKKDWTKVQCNNCKEMGHTVRR 193
Query: 114 CPGQTAGKS 122
CP G++
Sbjct: 194 CPKPVEGEN 202
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 15/73 (20%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYA------CHQAGHMAKECPGQTAGKSPEPVVDMSLTC 133
C NC GH +R CP++ S C+ GH A++C + K +C
Sbjct: 78 CVNCGQMGHGSRACPDERSVVEKVEVKCVNCNGMGHRARDCTEKRIDK---------FSC 128
Query: 134 YVCGHQGHLSYDC 146
CG +GH+S +C
Sbjct: 129 RNCGEEGHISKEC 141
>gi|201067640|gb|ACH92926.1| vasa protein [Parhyale hawaiensis]
Length = 707
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 64/160 (40%), Gaps = 30/160 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-----------ATESV 57
C C + GH + C C+KC GH +REC +
Sbjct: 56 CRKCGEEGHRAFECTSGGGGGGNR-----ACFKCGEEGHMSRECPQGGGQSFGGGGGGNR 110
Query: 58 TCYNCSGQGHVAKDC--------TVKSSIICYNCNSSGHFARNCP---NDSSKRCYACHQ 106
C+ C +GH+++DC C+ C GH +R+CP N K C+ C +
Sbjct: 111 GCFKCGEEGHMSRDCPNSVNGGGGASGGKGCFKCGEEGHMSRDCPSSGNGGGKGCFKCGE 170
Query: 107 AGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GHMA++CP G + C+ CG QGH DC
Sbjct: 171 DGHMARDCPQGGDGGG---GGGGNRGCFNCGEQGHNKADC 207
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 21/128 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV-CYKCNNYGHFARECATE---------SVT 58
C+ C + GH CPQ G G C+KC GH +R+C
Sbjct: 81 CFKCGEEGHMSRECPQGGGQSFGGGGGGNRGCFKCGEEGHMSRDCPNSVNGGGGASGGKG 140
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCN---SSGHFARNCPNDS--------SKRCYACHQA 107
C+ C +GH+++DC + C GH AR+CP ++ C+ C +
Sbjct: 141 CFKCGEEGHMSRDCPSSGNGGGKGCFKCGEDGHMARDCPQGGDGGGGGGGNRGCFNCGEQ 200
Query: 108 GHMAKECP 115
GH +CP
Sbjct: 201 GHNKADCP 208
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 13/99 (13%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES----VTCYNCSG 64
C+ C + GH CP S G G C+KC GH +R+C + C+ C
Sbjct: 112 CFKCGEEGHMSRDCP-NSVNGGGGASGGKGCFKCGEEGHMSRDCPSSGNGGGKGCFKCGE 170
Query: 65 QGHVAKDCTVKSSII--------CYNCNSSGHFARNCPN 95
GH+A+DC C+NC GH +CPN
Sbjct: 171 DGHMARDCPQGGDGGGGGGGNRGCFNCGEQGHNKADCPN 209
>gi|449439166|ref|XP_004137358.1| PREDICTED: cold shock domain-containing protein 3-like [Cucumis
sativus]
Length = 406
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 57/142 (40%), Gaps = 29/142 (20%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHF---ARECATESVTC 59
S+S C C D GH +SC + D D I CY C +GH T V+C
Sbjct: 250 SSSLRICLKCGDSGHDMFSCQNHYADD---DLKKIQCYICQKFGHLCCVNFTSDTSVVSC 306
Query: 60 YNCSGQGHVAKDCT--------VKSSIICYNCNSSGHFARNCPN--DSSKR--------- 100
Y C GH C+ SS CY C GHFAR C + S KR
Sbjct: 307 YKCGQTGHTGLSCSRLRGEASGAVSSSQCYRCGDEGHFARECTSSTKSGKRNREEASGAA 366
Query: 101 ----CYACHQAGHMAKECPGQT 118
CY C + GH A+EC T
Sbjct: 367 SPNPCYKCGEEGHFARECTSST 388
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIV----CYKCNNYGHFARECATESV 57
S TS + CY C GH SC + RG+ G V CY+C + GHFAREC + +
Sbjct: 299 SDTSVVSCYKCGQTGHTGLSCSR-----LRGEASGAVSSSQCYRCGDEGHFARECTSSTK 353
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
SG+ + + S CY C GHFAR C
Sbjct: 354 -----SGKRNREEASGAASPNPCYKCGEEGHFAREC 384
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 70/166 (42%), Gaps = 38/166 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-------ESVTCYN 61
C+ C GH +CP+K G +C KC + GH C + + CY
Sbjct: 229 CFICKKSGHRANACPEKHK---NGSSSLRICLKCGDSGHDMFSCQNHYADDDLKKIQCYI 285
Query: 62 CSGQGHVA-KDCTVKSSII-CYNCNSSGHFARNCPND--------SSKRCYACHQAGHMA 111
C GH+ + T +S++ CY C +GH +C SS +CY C GH A
Sbjct: 286 CQKFGHLCCVNFTSDTSVVSCYKCGQTGHTGLSCSRLRGEASGAVSSSQCYRCGDEGHFA 345
Query: 112 KECPGQT-AGK----------SPEPVVDMSLTCYVCGHQGHLSYDC 146
+EC T +GK SP P CY CG +GH + +C
Sbjct: 346 RECTSSTKSGKRNREEASGAASPNP-------CYKCGEEGHFAREC 384
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 67/154 (43%), Gaps = 30/154 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC + GH +C KS+ R C+ C + H A+ C +++ C+ C GH
Sbjct: 188 CYNCGEEGHNAVNC--KSAKRKR------PCFVCGSLEHNAKSC-SKARDCFICKKSGHR 238
Query: 69 AKDCTVK------SSIICYNCNSSGHFARNCPN----DSSKR--CYACHQAGHMAKECPG 116
A C K S IC C SGH +C N D K+ CY C + GH+ C
Sbjct: 239 ANACPEKHKNGSSSLRICLKCGDSGHDMFSCQNHYADDDLKKIQCYICQKFGHLC--CVN 296
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
T+ S ++CY CG GH C ++
Sbjct: 297 FTSDTS-------VVSCYKCGQTGHTGLSCSRLR 323
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 58 TCYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
TCYNC +GH A +C + K C+ C S H A++C ++ C+ C ++GH A CP
Sbjct: 187 TCYNCGEEGHNAVNCKSAKRKRPCFVCGSLEHNAKSCSK--ARDCFICKKSGHRANACPE 244
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ S + C CG GH + C+
Sbjct: 245 KHKNGSSSLRI-----CLKCGDSGHDMFSCQ 270
>gi|119196333|ref|XP_001248770.1| hypothetical protein CIMG_02541 [Coccidioides immitis RS]
Length = 300
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 46/100 (46%), Gaps = 16/100 (16%)
Query: 8 QCYNCFDFGHYQYSCPQK-SSADARGDKVGIVCYKCNNYGHFARECATES--------VT 58
+CY C GH CPQ S +ARG + CYKC GH +R C S
Sbjct: 205 ECYKCGQVGHISRECPQGGESGEARGQE----CYKCGQVGHISRNCGQYSGYNGGGYNAG 260
Query: 59 CYNCSGQ-GHVAKDCTV--KSSIICYNCNSSGHFARNCPN 95
Y G+ GHV++DCT K +CY C GH CPN
Sbjct: 261 SYRYGGETGHVSRDCTTEGKGERVCYKCKQPGHVQAACPN 300
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 52/125 (41%), Gaps = 22/125 (17%)
Query: 9 CYNCFDFGHYQYSCPQK-SSADARGDKVGIVCYKCNNYGHFARECA-------TESVTCY 60
CY C GH CPQ S ARG + CYKC GH +REC CY
Sbjct: 179 CYRCGLTGHISRDCPQAGESGGARGQE----CYKCGQVGHISRECPQGGESGEARGQECY 234
Query: 61 NCSGQGHVAKDCTVKSSIICYNC--------NSSGHFARNCPND--SSKRCYACHQAGHM 110
C GH++++C S +GH +R+C + + CY C Q GH+
Sbjct: 235 KCGQVGHISRNCGQYSGYNGGGYNAGSYRYGGETGHVSRDCTTEGKGERVCYKCKQPGHV 294
Query: 111 AKECP 115
CP
Sbjct: 295 QAACP 299
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 28/102 (27%)
Query: 68 VAKDCTVKSSIICYNCNS-----------------SGHFARNCPNDSS------KRCYAC 104
VA+DC K S+ICYNC +GH +R+CP + CY C
Sbjct: 150 VARDCPKKGSVICYNCGGRDCNEPAKEKSCYRCGLTGHISRDCPQAGESGGARGQECYKC 209
Query: 105 HQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
Q GH+++ECP G+S E CY CG GH+S +C
Sbjct: 210 GQVGHISRECP--QGGESGEA---RGQECYKCGQVGHISRNC 246
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 63/159 (39%), Gaps = 36/159 (22%)
Query: 9 CYNCFDFGH---------YQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTC 59
C+ C D H CP+K S ++CY C G E A E +C
Sbjct: 132 CFTCGDSAHQVNMMRAPFVARDCPKKGS---------VICYNCG--GRDCNEPAKEK-SC 179
Query: 60 YNCSGQGHVAKDCTVKSSI------ICYNCNSSGHFARNCPNDSS------KRCYACHQA 107
Y C GH+++DC CY C GH +R CP + CY C Q
Sbjct: 180 YRCGLTGHISRDCPQAGESGGARGQECYKCGQVGHISRECPQGGESGEARGQECYKCGQV 239
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GH+++ C GQ +G + S G GH+S DC
Sbjct: 240 GHISRNC-GQYSGYNGGGYNAGSYR--YGGETGHVSRDC 275
>gi|440801721|gb|ELR22726.1| zinc knuckle domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 557
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 40/145 (27%), Positives = 55/145 (37%), Gaps = 36/145 (24%)
Query: 38 VCYKCNNYGHFARECATES---VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
VC+ C GHF+R+C + C CS GH ++ C + IC CN+ GHFAR+C
Sbjct: 141 VCFNCGGTGHFSRDCIEARGLVMVCTTCSQVGHSSRQC--PDTTICNRCNTLGHFARDCR 198
Query: 95 NDSSKRCYACHQAGH------------MAKECPGQT----------AGKSPEPVVDMS-- 130
+ A + A PG G +VD
Sbjct: 199 GRERESAEAARRQKRRRSDGEALLGQPAAAATPGSNGRGTRGLSLGGGGDASKLVDFEVL 258
Query: 131 -------LTCYVCGHQGHLSYDCKL 148
L C+ CG +GHL +C L
Sbjct: 259 MRSPTRKLFCFNCGGEGHLGSNCNL 283
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSI--ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKE 113
+ C+NC G GH ++DC + +C C+ GH +R CP+ + C C+ GH A++
Sbjct: 139 ATVCFNCGGTGHFSRDCIEARGLVMVCTTCSQVGHSSRQCPDTTI--CNRCNTLGHFARD 196
Query: 114 CPGQ 117
C G+
Sbjct: 197 CRGR 200
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 15/74 (20%)
Query: 76 SSIICYNCNSSGHFARNCPNDSS--KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTC 133
++ +C+NC +GHF+R+C C C Q GH +++CP T C
Sbjct: 138 NATVCFNCGGTGHFSRDCIEARGLVMVCTTCSQVGHSSRQCPDTT-------------IC 184
Query: 134 YVCGHQGHLSYDCK 147
C GH + DC+
Sbjct: 185 NRCNTLGHFARDCR 198
>gi|449446157|ref|XP_004140838.1| PREDICTED: uncharacterized protein LOC101212555 [Cucumis sativus]
Length = 396
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 21/131 (16%)
Query: 32 GDKVGIVCYKCNNYGHFARECATES-----VTCYNCSGQGHVAKDCTVKSS-----IICY 81
G K G C+ C H A+ C ++ C C +GH K+C K+ +CY
Sbjct: 71 GMKPGESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKNEGTVDKKLCY 130
Query: 82 NCNSSGHFARNCPN---DSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
NC +GH NCP D + C+ C+++GH++K CP T G P+ C
Sbjct: 131 NCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPK-----GGCCKT 185
Query: 136 CGHQGHLSYDC 146
CG HL+ DC
Sbjct: 186 CGEVTHLAKDC 196
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 23/127 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC------ATESVTCYNC 62
C+ C H CP+K+ + +C C GH + C + CYNC
Sbjct: 78 CFICKANDHIAKLCPEKAQWEKNK-----ICLLCRRRGHSLKNCPDKNEGTVDKKLCYNC 132
Query: 63 SGQGHVAKDCTVKSS------IICYNCNSSGHFARNCPNDSSKR------CYACHQAGHM 110
GH +C C+ CN SGH ++NCP ++ C C + H+
Sbjct: 133 GETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHL 192
Query: 111 AKECPGQ 117
AK+CP +
Sbjct: 193 AKDCPKK 199
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 10/78 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY-------N 61
CYNC + GH +CPQ G C+ CN GH ++ C + Y
Sbjct: 129 CYNCGETGHSLANCPQPLQD---GGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKT 185
Query: 62 CSGQGHVAKDCTVKSSII 79
C H+AKDC K + +
Sbjct: 186 CGEVTHLAKDCPKKGTQV 203
>gi|15237136|ref|NP_200051.1| vascular-related NAC-domain 6 protein [Arabidopsis thaliana]
gi|10177404|dbj|BAB10535.1| unnamed protein product [Arabidopsis thaliana]
gi|90962970|gb|ABE02409.1| At5g52380 [Arabidopsis thaliana]
gi|332008824|gb|AED96207.1| vascular-related NAC-domain 6 protein [Arabidopsis thaliana]
Length = 268
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 65/146 (44%), Gaps = 27/146 (18%)
Query: 23 PQKSSADAR------GDKVGIVCYKCNNYGHFARECATESV-----TCYNCSGQGHVAKD 71
PQ++ + R G K G C+ C++ H A+ C +S C C +GH K+
Sbjct: 54 PQRTGSSTRHPLRVPGMKPGEGCFICHSKTHIAKLCPEKSEWERNKICLQCRRRGHSLKN 113
Query: 72 CTVKSS-----IICYNCNSSGHFARNCP---NDSSKR---CYACHQAGHMAKECPGQTAG 120
C K++ +CYNC +GH +CP D + C+ C GH++K CP G
Sbjct: 114 CPEKNNESSEKKLCYNCGDTGHSLSHCPYPMEDGGTKFASCFICKGQGHISKNCPENKHG 173
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ M C VCG HL DC
Sbjct: 174 -----IYPMGGCCKVCGSVAHLVKDC 194
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 52/135 (38%), Gaps = 23/135 (17%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC------ATESVTCYNC 62
C+ C H CP+KS + +C +C GH + C ++E CYNC
Sbjct: 76 CFICHSKTHIAKLCPEKSEWER-----NKICLQCRRRGHSLKNCPEKNNESSEKKLCYNC 130
Query: 63 SGQGHVAKDCTVKSS------IICYNCNSSGHFARNCPNDSSKR------CYACHQAGHM 110
GH C C+ C GH ++NCP + C C H+
Sbjct: 131 GDTGHSLSHCPYPMEDGGTKFASCFICKGQGHISKNCPENKHGIYPMGGCCKVCGSVAHL 190
Query: 111 AKECPGQTAGKSPEP 125
K+CP + +S +P
Sbjct: 191 VKDCPDKFNQESAQP 205
>gi|26452133|dbj|BAC43155.1| unknown protein [Arabidopsis thaliana]
Length = 268
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 65/146 (44%), Gaps = 27/146 (18%)
Query: 23 PQKSSADAR------GDKVGIVCYKCNNYGHFARECATESV-----TCYNCSGQGHVAKD 71
PQ++ + R G K G C+ C++ H A+ C +S C C +GH K+
Sbjct: 54 PQRTGSSTRHPLRVPGMKPGEGCFICHSKTHIAKLCPEKSEWERNKICLQCRRRGHSLKN 113
Query: 72 CTVKSS-----IICYNCNSSGHFARNCP---NDSSKR---CYACHQAGHMAKECPGQTAG 120
C K++ +CYNC +GH +CP D + C+ C GH++K CP G
Sbjct: 114 CPEKNNESSERKLCYNCGDTGHSLSHCPYPMEDGGTKFASCFICKGQGHISKNCPENKHG 173
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ M C VCG HL DC
Sbjct: 174 -----IYPMGGCCKVCGSVAHLVKDC 194
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 52/135 (38%), Gaps = 23/135 (17%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC------ATESVTCYNC 62
C+ C H CP+KS + +C +C GH + C ++E CYNC
Sbjct: 76 CFICHSKTHIAKLCPEKSEWER-----NKICLQCRRRGHSLKNCPEKNNESSERKLCYNC 130
Query: 63 SGQGHVAKDCTVKSS------IICYNCNSSGHFARNCPNDSSKR------CYACHQAGHM 110
GH C C+ C GH ++NCP + C C H+
Sbjct: 131 GDTGHSLSHCPYPMEDGGTKFASCFICKGQGHISKNCPENKHGIYPMGGCCKVCGSVAHL 190
Query: 111 AKECPGQTAGKSPEP 125
K+CP + +S +P
Sbjct: 191 VKDCPDKFNQESAQP 205
>gi|326505632|dbj|BAJ95487.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 480
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 72/172 (41%), Gaps = 43/172 (25%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+NC + GH +CP +K C+ C +GH A++C T+ C+ C GH+
Sbjct: 174 CFNCGEEGHVAVNCPM--------EKRKKPCFVCGLFGHNAKQC-TQGQECFICKKGGHM 224
Query: 69 AKDCTVKSSII-------CYNCNSSGHFARNCPND------SSKRCYACHQAGHM----- 110
AKDC K + I C C +GH C ND +CY C Q GH+
Sbjct: 225 AKDCPDKHTKITQQCTALCLRCGETGHDMFGCSNDYPLDDVKEIKCYVCKQNGHLCCTDF 284
Query: 111 ----AKECP-------GQT----AGKSPEPVVDMSLT-CYVCGHQGHLSYDC 146
+KE G T A + E V + T CY CG GH + C
Sbjct: 285 ADSCSKEVTCYNCAQSGHTGLGCAKQRRETSVATTPTLCYKCGEDGHFARGC 336
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 43/103 (41%), Gaps = 17/103 (16%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGH-----FARECATESVTCY 60
T C C + GH + C D D I CY C GH FA C+ E VTCY
Sbjct: 240 TALCLRCGETGHDMFGCSNDYPLD---DVKEIKCYVCKQNGHLCCTDFADSCSKE-VTCY 295
Query: 61 NCSGQGHVAKDC--------TVKSSIICYNCNSSGHFARNCPN 95
NC+ GH C + +CY C GHFAR C N
Sbjct: 296 NCAQSGHTGLGCAKQRRETSVATTPTLCYKCGEDGHFARGCTN 338
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 58 TCYNCSGQGHVAKDCTV-KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
TC+NC +GHVA +C + K C+ C GH A+ C + C+ C + GHMAK+CP
Sbjct: 173 TCFNCGEEGHVAVNCPMEKRKKPCFVCGLFGHNAKQCTQ--GQECFICKKGGHMAKDCP- 229
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
K + + C CG GH + C
Sbjct: 230 ---DKHTKITQQCTALCLRCGETGHDMFGC 256
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 51/121 (42%), Gaps = 18/121 (14%)
Query: 32 GDKVGIVCYKCNNYGHFARECATESV--TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHF 89
G+ + C+ C GH A C E C+ C GH AK CT C+ C GH
Sbjct: 167 GETILETCFNCGEEGHVAVNCPMEKRKKPCFVCGLFGHNAKQCTQGQE--CFICKKGGHM 224
Query: 90 ARNCPNDSSK-------RCYACHQAGHMAKECPGQTAGKSPEPVVDM-SLTCYVCGHQGH 141
A++CP+ +K C C + GH C P+ D+ + CYVC GH
Sbjct: 225 AKDCPDKHTKITQQCTALCLRCGETGHDMFGCSNDY------PLDDVKEIKCYVCKQNGH 278
Query: 142 L 142
L
Sbjct: 279 L 279
>gi|326516278|dbj|BAJ92294.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 480
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 72/172 (41%), Gaps = 43/172 (25%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+NC + GH +CP +K C+ C +GH A++C T+ C+ C GH+
Sbjct: 174 CFNCGEEGHVAVNCPM--------EKRKKPCFVCGLFGHNAKQC-TQGQECFICKKGGHM 224
Query: 69 AKDCTVKSSII-------CYNCNSSGHFARNCPND------SSKRCYACHQAGHM----- 110
AKDC K + I C C +GH C ND +CY C Q GH+
Sbjct: 225 AKDCPDKHTKITRQCTALCLRCGETGHDMFGCSNDYPLDDVKEIKCYVCKQNGHLCCTDF 284
Query: 111 ----AKECP-------GQT----AGKSPEPVVDMSLT-CYVCGHQGHLSYDC 146
+KE G T A + E V + T CY CG GH + C
Sbjct: 285 ADSCSKEVTCYNCAQSGHTGLGCAKQRRETSVATTPTLCYKCGEDGHFARGC 336
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 43/103 (41%), Gaps = 17/103 (16%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGH-----FARECATESVTCY 60
T C C + GH + C D D I CY C GH FA C+ E VTCY
Sbjct: 240 TALCLRCGETGHDMFGCSNDYPLD---DVKEIKCYVCKQNGHLCCTDFADSCSKE-VTCY 295
Query: 61 NCSGQGHVAKDC--------TVKSSIICYNCNSSGHFARNCPN 95
NC+ GH C + +CY C GHFAR C N
Sbjct: 296 NCAQSGHTGLGCAKQRRETSVATTPTLCYKCGEDGHFARGCTN 338
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 58 TCYNCSGQGHVAKDCTV-KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
TC+NC +GHVA +C + K C+ C GH A+ C + C+ C + GHMAK+CP
Sbjct: 173 TCFNCGEEGHVAVNCPMEKRKKPCFVCGLFGHNAKQCTQ--GQECFICKKGGHMAKDCP- 229
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
K + + C CG GH + C
Sbjct: 230 ---DKHTKITRQCTALCLRCGETGHDMFGC 256
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 51/121 (42%), Gaps = 18/121 (14%)
Query: 32 GDKVGIVCYKCNNYGHFARECATESV--TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHF 89
G+ + C+ C GH A C E C+ C GH AK CT C+ C GH
Sbjct: 167 GETILETCFNCGEEGHVAVNCPMEKRKKPCFVCGLFGHNAKQCTQGQE--CFICKKGGHM 224
Query: 90 ARNCPNDSSK-------RCYACHQAGHMAKECPGQTAGKSPEPVVDM-SLTCYVCGHQGH 141
A++CP+ +K C C + GH C P+ D+ + CYVC GH
Sbjct: 225 AKDCPDKHTKITRQCTALCLRCGETGHDMFGCSNDY------PLDDVKEIKCYVCKQNGH 278
Query: 142 L 142
L
Sbjct: 279 L 279
>gi|261205624|ref|XP_002627549.1| zinc knuckle transcription factor [Ajellomyces dermatitidis
SLH14081]
gi|239592608|gb|EEQ75189.1| zinc knuckle transcription factor [Ajellomyces dermatitidis
SLH14081]
Length = 473
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 24/144 (16%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTCYNCS 63
+C NC GH +CP + S + + N GH + EC + E V C C+
Sbjct: 256 KCGNCGQMGHGPRACPDERSV--------VEKVEVNQPGHRSSECTEPRSAEGVECKKCN 307
Query: 64 -GQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKS 122
G+ A CT ++ ++ GHFA++CP S+ C C + GH++KEC ++
Sbjct: 308 EGKPDDALRCTW-GKLLTFSI--VGHFAKDCPQGGSRACRNCGEEGHISKEC---DKPRN 361
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDC 146
P+ ++TC C GH S DC
Sbjct: 362 PD-----TVTCRNCEEVGHFSRDC 380
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 15 FGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT----ESVTCYNCSGQGHVAK 70
GH+ CPQ S C C GH ++EC ++VTC NC GH ++
Sbjct: 328 VGHFAKDCPQGGSR---------ACRNCGEEGHISKECDKPRNPDTVTCRNCEEVGHFSR 378
Query: 71 DCTVK---SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
DCT K S + C NC + H P D ++ GH + CP Q
Sbjct: 379 DCTKKKDWSKVQCNNCKETIH-----PTDEARPVNLMMIVGHTIRRCPKQ 423
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 50/121 (41%), Gaps = 17/121 (14%)
Query: 35 VGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTV--KSSIICYNCNSSGHFARN 92
V + Y ++G E + C NC GH A+DCT K++ C+NC GH
Sbjct: 20 VEQIGYDVGDFGE--NEVGGKDDACRNCGQSGHFARDCTEPRKATGACFNCGEEGHNKAE 77
Query: 93 C--PNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
C P C C + GH A ECP + A C C +GH + +C +
Sbjct: 78 CTKPRVFKGHCRICEKEGHPASECPEKPAD-----------VCKNCKEEGHKTMECTQNR 126
Query: 151 K 151
K
Sbjct: 127 K 127
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 16/112 (14%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CYNCSGQ 65
C NC GH+ C + A C+ C GH EC V C C +
Sbjct: 42 CRNCGQSGHFARDCTEPRKATG-------ACFNCGEEGHNKAECTKPRVFKGHCRICEKE 94
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
GH A +C K + +C NC GH C + R + H H+ + P Q
Sbjct: 95 GHPASECPEKPADVCKNCKEEGHKTMEC---TQNRKFDQH---HIPDKLPEQ 140
>gi|86211175|gb|ABC87271.1| vasa-like protein [Macrobrachium rosenbergii]
Length = 710
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Query: 39 CYKCNNYGHFARECATESV-------TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFAR 91
C+KC GHF+REC TC+ C +GH S + C GHF+R
Sbjct: 97 CHKCGEEGHFSRECPQAGGGGGSGPRTCHKCGEEGHFGGGGGGGGSRAHHKCGEEGHFSR 156
Query: 92 NCPNDSS------KRCYACHQAGHMAKECPGQTAG 120
CP + C+ C + GHM+++CP + +G
Sbjct: 157 ECPQGGGGGGSGPRTCHKCGEEGHMSRDCPQRGSG 191
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 30/111 (27%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVC------------------YKCNNYGHFAR 50
C+ C + GH+ CPQ G + C +KC GHF+R
Sbjct: 97 CHKCGEEGHFSRECPQAGGGGGSGPRTCHKCGEEGHFGGGGGGGGSRAHHKCGEEGHFSR 156
Query: 51 ECATESV-------TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
EC TC+ C +GH+++DC + S G +R CP
Sbjct: 157 ECPQGGGGGGSGPRTCHKCGEEGHMSRDCPQRGS-----GPRQGGGSRECP 202
>gi|239611240|gb|EEQ88227.1| zinc knuckle transcription factor [Ajellomyces dermatitidis ER-3]
Length = 477
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 66/144 (45%), Gaps = 24/144 (16%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC----ATESVTCYNCS 63
+C NC GH +CP + S + + N GH + EC + E V C C+
Sbjct: 260 KCGNCGQMGHGPRACPDERSV--------VEKVEVNQPGHRSSECTEPRSAEGVECKKCN 311
Query: 64 -GQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKS 122
G+ A CT ++ ++ GHFA++CP S+ C C + GH++KEC
Sbjct: 312 EGKPDDALRCTW-GKLLTFSI--VGHFAKDCPQGGSRACRNCGEEGHISKEC-------- 360
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDC 146
+P ++TC C GH S DC
Sbjct: 361 DKPRNPDTVTCRNCEEVGHFSRDC 384
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 47/110 (42%), Gaps = 21/110 (19%)
Query: 15 FGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT----ESVTCYNCSGQGHVAK 70
GH+ CPQ S C C GH ++EC ++VTC NC GH ++
Sbjct: 332 VGHFAKDCPQGGSR---------ACRNCGEEGHISKECDKPRNPDTVTCRNCEEVGHFSR 382
Query: 71 DCTVK---SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
DCT K S + C NC + H P D ++ GH + CP Q
Sbjct: 383 DCTKKKDWSKVQCNNCKETIH-----PTDEARPVNLMMIVGHTIRRCPKQ 427
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 50/121 (41%), Gaps = 17/121 (14%)
Query: 35 VGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTV--KSSIICYNCNSSGHFARN 92
V + Y ++G E + C NC GH A+DCT K++ C+NC GH
Sbjct: 24 VEQIGYDVGDFGE--NEVGGKDDACRNCGQSGHFARDCTEPRKATGACFNCGEEGHNKAE 81
Query: 93 C--PNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
C P C C + GH A ECP + A C C +GH + +C +
Sbjct: 82 CTKPRVFKGHCRICEKEGHPASECPEKPAD-----------VCKNCKEEGHKTMECTQNR 130
Query: 151 K 151
K
Sbjct: 131 K 131
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 16/112 (14%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CYNCSGQ 65
C NC GH+ C + A C+ C GH EC V C C +
Sbjct: 46 CRNCGQSGHFARDCTEPRKATG-------ACFNCGEEGHNKAECTKPRVFKGHCRICEKE 98
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
GH A +C K + +C NC GH C + R + H H+ + P Q
Sbjct: 99 GHPASECPEKPADVCKNCKEEGHKTMEC---TQNRKFDQH---HIPDKLPEQ 144
>gi|357444017|ref|XP_003592286.1| Zinc finger CCHC domain-containing protein [Medicago truncatula]
gi|355481334|gb|AES62537.1| Zinc finger CCHC domain-containing protein [Medicago truncatula]
Length = 262
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 58 TCYNCSGQGHVAKDCTVKSSI----ICYNCNSSGHFARNCPNDSSKR----CYACHQAGH 109
+C+ C G H+AK CT K+ IC C GH A+NCP+ SK CY C GH
Sbjct: 68 SCFICKGLDHIAKFCTQKAEWEKNKICLRCRRRGHRAQNCPDGGSKEDFKYCYNCGDNGH 127
Query: 110 MAKECPG--QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CP Q G M C+VC QGHLS +C
Sbjct: 128 SLANCPHPLQEGGT-------MFAQCFVCKEQGHLSKNC 159
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 20/130 (15%)
Query: 32 GDKVGIVCYKCNNYGHFARECATESV-----TCYNCSGQGHVAKDCTVKSSI----ICYN 82
G K G C+ C H A+ C ++ C C +GH A++C S CYN
Sbjct: 62 GMKPGDSCFICKGLDHIAKFCTQKAEWEKNKICLRCRRRGHRAQNCPDGGSKEDFKYCYN 121
Query: 83 CNSSGHFARNCPNDSSK------RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVC 136
C +GH NCP+ + +C+ C + GH++K CP G P+ C +C
Sbjct: 122 CGDNGHSLANCPHPLQEGGTMFAQCFVCKEQGHLSKNCPKNAHGIYPK-----GGCCKIC 176
Query: 137 GHQGHLSYDC 146
G HL+ DC
Sbjct: 177 GGVTHLARDC 186
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 57/146 (39%), Gaps = 27/146 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-----TESVTCYNCS 63
C+ C H C QK+ + +C +C GH A+ C + CYNC
Sbjct: 69 CFICKGLDHIAKFCTQKAEWEK-----NKICLRCRRRGHRAQNCPDGGSKEDFKYCYNCG 123
Query: 64 GQGHVAKDCTVKSS------IICYNCNSSGHFARNCPNDSSKR------CYACHQAGHMA 111
GH +C C+ C GH ++NCP ++ C C H+A
Sbjct: 124 DNGHSLANCPHPLQEGGTMFAQCFVCKEQGHLSKNCPKNAHGIYPKGGCCKICGGVTHLA 183
Query: 112 KECP--GQTA---GKSPEPVVDMSLT 132
++CP GQ G+ PV ++ T
Sbjct: 184 RDCPDKGQNGFGDGRPKGPVHNLLRT 209
>gi|294881361|ref|XP_002769349.1| hypothetical protein Pmar_PMAR015676 [Perkinsus marinus ATCC 50983]
gi|239872678|gb|EER02067.1| hypothetical protein Pmar_PMAR015676 [Perkinsus marinus ATCC 50983]
Length = 78
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 15/77 (19%)
Query: 54 TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS--------------- 98
T C+ C GH A+DCT + C+ C +GH AR+CPN+ +
Sbjct: 1 TNQRPCFKCGQVGHFARDCTAPDTRACFRCGETGHLARDCPNEDTRPESDRAPRGRGAEG 60
Query: 99 KRCYACHQAGHMAKECP 115
+ C+ C Q GH A++CP
Sbjct: 61 RNCFKCGQPGHFARDCP 77
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 16/73 (21%)
Query: 39 CYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSSII---------------CYN 82
C+KC GHFAR+C A ++ C+ C GH+A+DC + + C+
Sbjct: 6 CFKCGQVGHFARDCTAPDTRACFRCGETGHLARDCPNEDTRPESDRAPRGRGAEGRNCFK 65
Query: 83 CNSSGHFARNCPN 95
C GHFAR+CPN
Sbjct: 66 CGQPGHFARDCPN 78
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ----TAGKSPEPVVDMSLTCYV 135
C+ C GHFAR+C ++ C+ C + GH+A++CP + + ++P C+
Sbjct: 6 CFKCGQVGHFARDCTAPDTRACFRCGETGHLARDCPNEDTRPESDRAPRGRGAEGRNCFK 65
Query: 136 CGHQGHLSYDC 146
CG GH + DC
Sbjct: 66 CGQPGHFARDC 76
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQK-----SSADARGDKV-GIVCYKCNNYGHFAREC 52
++ T C+ C + GH CP + S RG G C+KC GHFAR+C
Sbjct: 20 TAPDTRACFRCGETGHLARDCPNEDTRPESDRAPRGRGAEGRNCFKCGQPGHFARDC 76
>gi|307205644|gb|EFN83918.1| ATP-dependent RNA helicase glh-4 [Harpegnathos saltator]
Length = 125
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 22/124 (17%)
Query: 38 VCYKCNNYGHFARECATE----SVTCYNCSGQGHVAKDCTVKSS----IICYNCNSSGHF 89
+C+K GHFA+ C ++ C NC GH ++C SS +IC NCN GH
Sbjct: 3 ICFK---TGHFAQNCLLHRNQPNIICQNCQRPGHSFRECRSNSSNLNILICRNCNKMGHI 59
Query: 90 ARNCPNDSSKR-------CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHL 142
RNC +S++ C C++ GH+A +C + K+ V TC V G H
Sbjct: 60 TRNCYVNSNRNNTRSEEICQRCNRRGHLASQCRKRQITKNQSRPV----TCQVYGKSSHN 115
Query: 143 SYDC 146
+ DC
Sbjct: 116 ARDC 119
>gi|118353410|ref|XP_001009973.1| Zinc knuckle family protein [Tetrahymena thermophila]
gi|89291740|gb|EAR89728.1| Zinc knuckle family protein [Tetrahymena thermophila SB210]
Length = 612
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 54/124 (43%), Gaps = 20/124 (16%)
Query: 34 KVGIVCYKCNNYGHFARECATE-SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARN 92
K + C +C GHF R C E C NC G H A+ C K ICY+C+ GH + N
Sbjct: 316 KPQMTCRRCKQQGHFERMCMLEVKDVCNNCLG-DHFARQCQQK---ICYSCSQFGHASAN 371
Query: 93 CPNDSSKRCYACHQAGHMAKEC---------------PGQTAGKSPEPVVDMSLTCYVCG 137
CP + ++C C + GH+ +C P + + D + C VC
Sbjct: 372 CPKQNQQKCSRCQKPGHIKADCGAIFMNSYSKYKQNTPFNGIEEEWKKTDDQKIKCMVCH 431
Query: 138 HQGH 141
+GH
Sbjct: 432 KKGH 435
>gi|343420182|emb|CCD19181.1| nucleic acid binding protein, putative [Trypanosoma vivax Y486]
Length = 416
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 18/111 (16%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKS-SIICYNCNSSGHFARNCPNDS 97
C+ ++GH ++ CA++ V C++CS GH + +C K +CY C GH CP
Sbjct: 10 CFNRGHFGHSSQLCASKPV-CFHCSMPGHTSTECPRKDMGRLCYRCKEPGHDMAKCPQ-- 66
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
S +C+ C+Q GH+ +CP + C C +GH++ CK+
Sbjct: 67 SPQCHMCNQTGHLVAQCP--------------EVLCNRCHQKGHMASACKM 103
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 46/109 (42%), Gaps = 18/109 (16%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV--TCYNCSGQ 65
+C+N FGH C K VC+ C+ GH + EC + + CY C
Sbjct: 9 RCFNRGHFGHSSQLCASKP-----------VCFHCSMPGHTSTECPRKDMGRLCYRCKEP 57
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
GH C S C+ CN +GH CP C CHQ GHMA C
Sbjct: 58 GHDMAKCP--QSPQCHMCNQTGHLVAQCPE---VLCNRCHQKGHMASAC 101
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 16/92 (17%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN-DSSKRCYACHQAGHMAKECPGQ 117
C+N GH ++ C K +C++C+ GH + CP D + CY C + GH +CP
Sbjct: 10 CFNRGHFGHSSQLCASKP--VCFHCSMPGHTSTECPRKDMGRLCYRCKEPGHDMAKCP-- 65
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
+SP+ C++C GHL C V
Sbjct: 66 ---QSPQ--------CHMCNQTGHLVAQCPEV 86
>gi|357470935|ref|XP_003605752.1| Pol polyprotein [Medicago truncatula]
gi|355506807|gb|AES87949.1| Pol polyprotein [Medicago truncatula]
Length = 745
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 31 RGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFA 90
+ D IV + C GH + C E C C +GHV DC ++ I+C+NCN GH +
Sbjct: 249 KKDAAEIVYFNCGEKGHKSNACPEEIKKCVRCGKKGHVVADCN-RTDIVCFNCNGEGHIS 307
Query: 91 RNC 93
C
Sbjct: 308 SQC 310
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 10/64 (15%)
Query: 10 YNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVA 69
+NC + GH +CP++ C +C GH +C + C+NC+G+GH++
Sbjct: 258 FNCGEKGHKSNACPEEIKK----------CVRCGKKGHVVADCNRTDIVCFNCNGEGHIS 307
Query: 70 KDCT 73
CT
Sbjct: 308 SQCT 311
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
+ I+ +NC GH + CP + K+C C + GH+ +C + C+
Sbjct: 253 AEIVYFNCGEKGHKSNACP-EEIKKCVRCGKKGHVVADCN------------RTDIVCFN 299
Query: 136 CGHQGHLSYDC 146
C +GH+S C
Sbjct: 300 CNGEGHISSQC 310
>gi|217073290|gb|ACJ85004.1| unknown [Medicago truncatula]
Length = 262
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 58 TCYNCSGQGHVAKDCTVKSSI----ICYNCNSSGHFARNCPNDSSKR----CYACHQAGH 109
+C+ C G H+AK CT K+ IC C GH A+NCP+ SK CY C GH
Sbjct: 68 SCFICKGLDHIAKFCTQKAEWEKNKICVRCRRRGHRAQNCPDGGSKEDFKYCYNCGDNGH 127
Query: 110 MAKECPG--QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CP Q G M C+VC QGHLS +C
Sbjct: 128 SLANCPHPLQEGGT-------MFAQCFVCKEQGHLSKNC 159
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 20/130 (15%)
Query: 32 GDKVGIVCYKCNNYGHFARECATESV-----TCYNCSGQGHVAKDCTVKSSI----ICYN 82
G + G C+ C H A+ C ++ C C +GH A++C S CYN
Sbjct: 62 GMEPGDSCFICKGLDHIAKFCTQKAEWEKNKICVRCRRRGHRAQNCPDGGSKEDFKYCYN 121
Query: 83 CNSSGHFARNCPNDSSK------RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVC 136
C +GH NCP+ + +C+ C + GH++K CP G P+ C +C
Sbjct: 122 CGDNGHSLANCPHPLQEGGTMFAQCFVCKEQGHLSKNCPKNAHGIYPK-----GGCCKIC 176
Query: 137 GHQGHLSYDC 146
G HL+ DC
Sbjct: 177 GGVTHLARDC 186
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 57/146 (39%), Gaps = 27/146 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-----TESVTCYNCS 63
C+ C H C QK+ + +C +C GH A+ C + CYNC
Sbjct: 69 CFICKGLDHIAKFCTQKAEWEK-----NKICVRCRRRGHRAQNCPDGGSKEDFKYCYNCG 123
Query: 64 GQGHVAKDCTVKSS------IICYNCNSSGHFARNCPNDSSKR------CYACHQAGHMA 111
GH +C C+ C GH ++NCP ++ C C H+A
Sbjct: 124 DNGHSLANCPHPLQEGGTMFAQCFVCKEQGHLSKNCPKNAHGIYPKGGCCKICGGVTHLA 183
Query: 112 KECP--GQTA---GKSPEPVVDMSLT 132
++CP GQ G+ PV ++ T
Sbjct: 184 RDCPDKGQNGFGDGRPKGPVHNLLRT 209
>gi|388501938|gb|AFK39035.1| unknown [Medicago truncatula]
Length = 220
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 48/100 (48%), Gaps = 19/100 (19%)
Query: 58 TCYNCSGQGHVAKDCTVKSSI----ICYNCNSSGHFARNCPNDSSKR----CYACHQAGH 109
+C+ C G H+AK CT K+ IC C GH A+NCP+ SK CY C GH
Sbjct: 68 SCFICKGLDHIAKFCTQKAEWEKNKICLRCRRRGHRAQNCPDGGSKEDFKYCYNCGDNGH 127
Query: 110 MAKECPGQTAGKSPEPVVD---MSLTCYVCGHQGHLSYDC 146
C P P+ + M C+VC QGHLS +C
Sbjct: 128 SLANC--------PHPLQEGGTMFAQCFVCKEQGHLSKNC 159
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 20/137 (14%)
Query: 25 KSSADARGDKVGIVCYKCNNYGHFARECATESV-----TCYNCSGQGHVAKDCTVKSSI- 78
K G + G C+ C H A+ C ++ C C +GH A++C S
Sbjct: 55 KRPLRVPGMEPGDSCFICKGLDHIAKFCTQKAEWEKNKICLRCRRRGHRAQNCPDGGSKE 114
Query: 79 ---ICYNCNSSGHFARNCPNDSSK------RCYACHQAGHMAKECPGQTAGKSPEPVVDM 129
CYNC +GH NCP+ + +C+ C + GH++K CP G P+
Sbjct: 115 DFKYCYNCGDNGHSLANCPHPLQEGGTMFAQCFVCKEQGHLSKNCPKNAHGIYPK----- 169
Query: 130 SLTCYVCGHQGHLSYDC 146
C +CG HL+ DC
Sbjct: 170 GGCCKICGGVTHLARDC 186
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 57/146 (39%), Gaps = 27/146 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-----TESVTCYNCS 63
C+ C H C QK+ + +C +C GH A+ C + CYNC
Sbjct: 69 CFICKGLDHIAKFCTQKAEWEK-----NKICLRCRRRGHRAQNCPDGGSKEDFKYCYNCG 123
Query: 64 GQGHVAKDCTVKSS------IICYNCNSSGHFARNCPNDSSKR------CYACHQAGHMA 111
GH +C C+ C GH ++NCP ++ C C H+A
Sbjct: 124 DNGHSLANCPHPLQEGGTMFAQCFVCKEQGHLSKNCPKNAHGIYPKGGCCKICGGVTHLA 183
Query: 112 KECP--GQTA---GKSPEPVVDMSLT 132
++CP GQ G+ PV ++ T
Sbjct: 184 RDCPDKGQNGFGDGRPKGPVHNLLRT 209
>gi|408396967|gb|EKJ76118.1| hypothetical protein FPSE_03593 [Fusarium pseudograminearum CS3096]
Length = 1380
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA----TESV 57
+S T C C GH + CP+ + ++ D+ C+ C+ GH A +C TE+
Sbjct: 1141 TSADTQWCTKCKTRGHTHFRCPE-TREHSQPDEFRFKCHNCDKQGHKAADCTEPPKTENR 1199
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
C+NC GH+ +C + C+ C H ++CP++ RC+ Q GH+A C
Sbjct: 1200 KCFNCGEYGHMKSNCPERQ---CHFCGDKDHLKKDCPHERCNRCF---QLGHLAPTC 1250
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 57/144 (39%), Gaps = 37/144 (25%)
Query: 16 GHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES---------VTCYNCSGQG 66
GH+ ++C +SAD + C KC GH C C+NC QG
Sbjct: 1133 GHHFFNC--TTSADTQW------CTKCKTRGHTHFRCPETREHSQPDEFRFKCHNCDKQG 1184
Query: 67 HVAKDCTVKSSI---ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
H A DCT C+NC GH NCP ++C+ C H+ K+CP +
Sbjct: 1185 HKAADCTEPPKTENRKCFNCGEYGHMKSNCP---ERQCHFCGDKDHLKKDCPHE------ 1235
Query: 124 EPVVDMSLTCYVCGHQGHLSYDCK 147
C C GHL+ CK
Sbjct: 1236 --------RCNRCFQLGHLAPTCK 1251
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 57/168 (33%), Gaps = 59/168 (35%)
Query: 12 CFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKD 71
C D GH CP++ C C H + EC E C C +GH +
Sbjct: 1091 CGDKGHTAAFCPKR------------FCGNCAEINHTSGECPLEHFLCSACGRKGHHFFN 1138
Query: 72 CTVKSS------------------------------IICYNCNSSGHFARNC---PNDSS 98
CT + C+NC+ GH A +C P +
Sbjct: 1139 CTTSADTQWCTKCKTRGHTHFRCPETREHSQPDEFRFKCHNCDKQGHKAADCTEPPKTEN 1198
Query: 99 KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++C+ C + GHM CP + C+ CG + HL DC
Sbjct: 1199 RKCFNCGEYGHMKSNCPER--------------QCHFCGDKDHLKKDC 1232
>gi|426396452|ref|XP_004064455.1| PREDICTED: zinc finger CCHC domain-containing protein 13-like
[Gorilla gorilla gorilla]
Length = 166
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 17/115 (14%)
Query: 35 VGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT---VKSSIICYNCNSSGHFAR 91
+ CY C G A+ CYNC GH+AKDC + CY C GH AR
Sbjct: 43 LSYTCYCCGESGRHAKNFVLLGNICYNCGRSGHIAKDCKEPKRERRQHCYTCGRLGHLAR 102
Query: 92 NCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+C ++CY+C + GH+ K+ + Y CG GH++ +C
Sbjct: 103 DCDRQKEQKCYSCGKLGHIQKD--------------YAQVKRYRCGEIGHVAINC 143
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 10/86 (11%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE-SVTCYNCSGQGH 67
CYNC GH C + + CY C GH AR+C + CY+C GH
Sbjct: 67 CYNCGRSGHIAKDCKEPKRERRQ------HCYTCGRLGHLARDCDRQKEQKCYSCGKLGH 120
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNC 93
+ KD + + Y C GH A NC
Sbjct: 121 IQKD---YAQVKRYRCGEIGHVAINC 143
>gi|255986336|gb|ACU50551.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ +I C+NC GH ARNC + C+ C Q GH KECPG+ A
Sbjct: 387 RKTIKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKECPGRQA 431
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMA 111
+++ C+NC +GH+A++C C+ C GH + CP + + + H+
Sbjct: 388 KTIKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKECPGRQANFLGKVWPSHKGR--- 444
Query: 112 KECPGQTAGKSPEP 125
PG PEP
Sbjct: 445 ---PGNFLQNRPEP 455
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
R + I C+ C GH AR C A C+ C +GH K+C
Sbjct: 384 RNQRKTIKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKEC 426
>gi|300720099|gb|ADK33038.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A E+++ N S + K + C+NC GH A+NC
Sbjct: 348 CQGVGGPGHKARVLA-EAMSQTNSSILMQRSNFKGAKRIVKCFNCGKEGHIAKNCRAPRK 406
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C Q GH KECPG+ A
Sbjct: 407 KGCWKCGQEGHQMKECPGRQA 427
Score = 38.5 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
++ +G K + C+ C GH A+ C A C+ C +GH K+C
Sbjct: 377 SNFKGAKRIVKCFNCGKEGHIAKNCRAPRKKGCWKCGQEGHQMKEC 422
>gi|297796051|ref|XP_002865910.1| zinc knuckle (CCHC-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311745|gb|EFH42169.1| zinc knuckle (CCHC-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 268
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 63/146 (43%), Gaps = 27/146 (18%)
Query: 23 PQKSSADAR------GDKVGIVCYKCNNYGHFARECATESV-----TCYNCSGQGHVAKD 71
PQ+ + R G K G C+ C++ H A+ C +S C C +GH K+
Sbjct: 54 PQRKGSSTRHPLRVPGMKPGEGCFICHSKTHIAKLCPEKSEWERNKICLQCRRRGHSLKN 113
Query: 72 CTVKSS-----IICYNCNSSGHFARNCP---NDSSKR---CYACHQAGHMAKECPGQTAG 120
C K+ +CYNC +GH +CP D + C+ C GH++K CP G
Sbjct: 114 CPEKNDESSEKKLCYNCGDTGHSLSHCPYPLEDGGTKFASCFICKGQGHISKNCPQNKHG 173
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ M C VCG HL DC
Sbjct: 174 -----IYPMGGCCKVCGSVAHLVKDC 194
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 56/155 (36%), Gaps = 23/155 (14%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC------ATESVTCYNC 62
C+ C H CP+KS + +C +C GH + C ++E CYNC
Sbjct: 76 CFICHSKTHIAKLCPEKSEWER-----NKICLQCRRRGHSLKNCPEKNDESSEKKLCYNC 130
Query: 63 SGQGHVAKDCTVKSS------IICYNCNSSGHFARNCPNDSSKR------CYACHQAGHM 110
GH C C+ C GH ++NCP + C C H+
Sbjct: 131 GDTGHSLSHCPYPLEDGGTKFASCFICKGQGHISKNCPQNKHGIYPMGGCCKVCGSVAHL 190
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYD 145
K+CP + +S +P G LS D
Sbjct: 191 VKDCPDKFNQESAQPKKTSRFDATPRGKVTKLSGD 225
>gi|912558|gb|AAB38055.1| gag polyprotein, partial [Human immunodeficiency virus 1]
Length = 463
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSG----QGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
C GH AR A N + +G+V + +I C+NC GH ARNC
Sbjct: 350 CQGVGGPGHKARVLAEAMSQVTNSTTIMMQRGNVKNQ---RKAIKCFNCGKEGHLARNCR 406
Query: 95 NDSSKRCYACHQAGHMAKECPGQTA 119
+ C+ C Q GH KECPG+ A
Sbjct: 407 APRKRGCWKCGQEGHQMKECPGRQA 431
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMA 111
+++ C+NC +GH+A++C C+ C GH + CP + + + H+
Sbjct: 388 KAIKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKECPGRQANFLGKIWPSHKGR--- 444
Query: 112 KECPGQTAGKSPEP 125
PG PEP
Sbjct: 445 ---PGNFLQNRPEP 455
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
+ + + I C+ C GH AR C A C+ C +GH K+C
Sbjct: 381 GNVKNQRKAIKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKEC 426
>gi|82571406|gb|ABB84163.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A E+++ N S + K + C+NC GH A+NC
Sbjct: 348 CQGVGGPGHKARVLA-EAMSQTNSSILMQRSNFKGAKRIVKCFNCGKEGHIAKNCRAPRK 406
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C Q GH KECPG+ A
Sbjct: 407 KGCWECGQEGHQMKECPGRQA 427
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
++ +G K + C+ C GH A+ C A C+ C +GH K+C
Sbjct: 377 SNFKGAKRIVKCFNCGKEGHIAKNCRAPRKKGCWECGQEGHQMKEC 422
>gi|225470195|ref|XP_002268512.1| PREDICTED: uncharacterized protein LOC100242054 [Vitis vinifera]
Length = 401
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 21/131 (16%)
Query: 32 GDKVGIVCYKCNNYGHFARECATES-----VTCYNCSGQGHVAKDCTVK-----SSIICY 81
G K G C+ C H A+ C ++ C C +GH K+C K +CY
Sbjct: 72 GMKPGESCFICKAKDHIAKHCPEKAQWERHKICLLCRQRGHSLKNCPDKGEEKLDKKLCY 131
Query: 82 NCNSSGHFARNCPNDSSK------RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
NC +GH NCP + C+ C++ GH++K CP + G P+ C +
Sbjct: 132 NCGETGHSLANCPQPLQEGGTKFASCFICNERGHLSKNCPKNSHGIYPK-----GGCCKI 186
Query: 136 CGHQGHLSYDC 146
CG HL+ DC
Sbjct: 187 CGGVTHLAKDC 197
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 51/133 (38%), Gaps = 23/133 (17%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA------TESVTCYNC 62
C+ C H CP+K+ + +C C GH + C + CYNC
Sbjct: 79 CFICKAKDHIAKHCPEKAQWERHK-----ICLLCRQRGHSLKNCPDKGEEKLDKKLCYNC 133
Query: 63 SGQGHVAKDCTVKSS------IICYNCNSSGHFARNCPNDSSKR------CYACHQAGHM 110
GH +C C+ CN GH ++NCP +S C C H+
Sbjct: 134 GETGHSLANCPQPLQEGGTKFASCFICNERGHLSKNCPKNSHGIYPKGGCCKICGGVTHL 193
Query: 111 AKECPGQTAGKSP 123
AK+CP + SP
Sbjct: 194 AKDCPNKGCNNSP 206
>gi|307210975|gb|EFN87274.1| ATP-dependent RNA helicase glh-4 [Harpegnathos saltator]
Length = 99
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 49/101 (48%), Gaps = 17/101 (16%)
Query: 59 CYNCSGQGHVAKDCTVKSS----IICYNCNSSGHFARNC-------PNDSSKRCYACHQA 107
C NC GH +++C SS +IC NCN GH ARNC S + C C+
Sbjct: 2 CQNCQRPGHSSRECRSNSSNINTLICRNCNKMGHIARNCYAHSNYNTTLSEEICQWCNGR 61
Query: 108 GHMAKE-CPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
GH+ + C QTA PV TC VCG GH + DC+
Sbjct: 62 GHLVSQCCKRQTAKNLSRPV-----TCQVCGKSGHNARDCR 97
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--------A 53
S+ +T+ C NC GH +C S+ + + +C CN GH +C
Sbjct: 20 SNINTLICRNCNKMGHIARNCYAHSNYNTTLSEE--ICQWCNGRGHLVSQCCKRQTAKNL 77
Query: 54 TESVTCYNCSGQGHVAKDC 72
+ VTC C GH A+DC
Sbjct: 78 SRPVTCQVCGKSGHNARDC 96
>gi|302143876|emb|CBI22737.3| unnamed protein product [Vitis vinifera]
Length = 279
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 21/131 (16%)
Query: 32 GDKVGIVCYKCNNYGHFARECATES-----VTCYNCSGQGHVAKDCTVK-----SSIICY 81
G K G C+ C H A+ C ++ C C +GH K+C K +CY
Sbjct: 72 GMKPGESCFICKAKDHIAKHCPEKAQWERHKICLLCRQRGHSLKNCPDKGEEKLDKKLCY 131
Query: 82 NCNSSGHFARNCPNDSSK------RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
NC +GH NCP + C+ C++ GH++K CP + G P+ C +
Sbjct: 132 NCGETGHSLANCPQPLQEGGTKFASCFICNERGHLSKNCPKNSHGIYPK-----GGCCKI 186
Query: 136 CGHQGHLSYDC 146
CG HL+ DC
Sbjct: 187 CGGVTHLAKDC 197
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 51/133 (38%), Gaps = 23/133 (17%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA------TESVTCYNC 62
C+ C H CP+K+ + +C C GH + C + CYNC
Sbjct: 79 CFICKAKDHIAKHCPEKAQWERHK-----ICLLCRQRGHSLKNCPDKGEEKLDKKLCYNC 133
Query: 63 SGQGHVAKDCTVKSS------IICYNCNSSGHFARNCPNDSSKR------CYACHQAGHM 110
GH +C C+ CN GH ++NCP +S C C H+
Sbjct: 134 GETGHSLANCPQPLQEGGTKFASCFICNERGHLSKNCPKNSHGIYPKGGCCKICGGVTHL 193
Query: 111 AKECPGQTAGKSP 123
AK+CP + SP
Sbjct: 194 AKDCPNKGCNNSP 206
>gi|168009954|ref|XP_001757670.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691364|gb|EDQ77727.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 106
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 11/85 (12%)
Query: 58 TCYNCSGQGHVAKDCTVKS-SIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
TCYNC QGH A +CT ++ CY C + GHF+ +CP + RCY C + GHM C
Sbjct: 2 TCYNCGQQGHWAAECTKQAREKPCYVCGNFGHFSYDCPE--ALRCYICKRTGHM---CCI 56
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGH 141
+ SP PV +CY CG GH
Sbjct: 57 DVSDASPTPV-----SCYRCGDLGH 76
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 21/94 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHF----ARECATESVTCYNCSG 64
CY C +FGH+ Y CP+ + CY C GH + + V+CY C
Sbjct: 25 CYVCGNFGHFSYDCPE-----------ALRCYICKRTGHMCCIDVSDASPTPVSCYRCGD 73
Query: 65 QGH-----VAKDCTVKSSIICYNCNSSGHFARNC 93
GH +++D + ++ CY C + GHFAR C
Sbjct: 74 LGHSGVVSISQD-SYENQTACYRCGNEGHFAREC 106
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 16/113 (14%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGH- 67
CYNC GH+ C +++ CY C N+GHF+ +C E++ CY C GH
Sbjct: 3 CYNCGQQGHWAAECTKQAREKP--------CYVCGNFGHFSYDCP-EALRCYICKRTGHM 53
Query: 68 --VAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR----CYACHQAGHMAKEC 114
+ + + CY C GH + S CY C GH A+EC
Sbjct: 54 CCIDVSDASPTPVSCYRCGDLGHSGVVSISQDSYENQTACYRCGNEGHFAREC 106
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 10/48 (20%)
Query: 99 KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ CY C Q GH A EC Q K CYVCG+ GH SYDC
Sbjct: 1 ETCYNCGQQGHWAAECTKQAREKP----------CYVCGNFGHFSYDC 38
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC 52
+S + + CY C D GH + S + + CY+C N GHFAREC
Sbjct: 61 ASPTPVSCYRCGDLGHSGVVSISQDSYENQ-----TACYRCGNEGHFAREC 106
>gi|407040390|gb|EKE40104.1| zinc finger protein containing CCHC type domain containing protein
[Entamoeba nuttalli P19]
Length = 164
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 58 TCYNCSGQGHVAKDCTVKS---SIICYNCNSSGHFARNCPNDSSKR-----CYACHQAGH 109
C+ C GH K+C K+ ICYNC S H R+CP + + C+ CHQ GH
Sbjct: 15 ICFYCRQPGHCLKNCPKKAKGEDSICYNCGSHDHILRDCPEPRTGKLAFSTCFVCHQMGH 74
Query: 110 MAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
++++CP G P+ C CG H + DC +K
Sbjct: 75 ISRDCPNNPKGIYPQ-----GGGCRYCGDVNHFAKDCPNKRKK 112
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 18/116 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------TCYNC 62
C+ C GH +CP+K+ + +CY C ++ H R+C TC+ C
Sbjct: 16 CFYCRQPGHCLKNCPKKAKGEDS------ICYNCGSHDHILRDCPEPRTGKLAFSTCFVC 69
Query: 63 SGQGHVAKDCTVKSSII------CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAK 112
GH+++DC I C C HFA++CPN K+ Q +++K
Sbjct: 70 HQMGHISRDCPNNPKGIYPQGGGCRYCGDVNHFAKDCPNKRKKQTGDDDQDDYVSK 125
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 15/100 (15%)
Query: 38 VCYKCNNYGHFARECAT----ESVTCYNCSGQGHVAKDCTVKSS-----IICYNCNSSGH 88
+C+ C GH + C E CYNC H+ +DC + C+ C+ GH
Sbjct: 15 ICFYCRQPGHCLKNCPKKAKGEDSICYNCGSHDHILRDCPEPRTGKLAFSTCFVCHQMGH 74
Query: 89 FARNCPNDSSK------RCYACHQAGHMAKECPGQTAGKS 122
+R+CPN+ C C H AK+CP + ++
Sbjct: 75 ISRDCPNNPKGIYPQGGGCRYCGDVNHFAKDCPNKRKKQT 114
>gi|320032219|gb|EFW14174.1| zinc knuckle transcription factor [Coccidioides posadasii str.
Silveira]
Length = 453
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 33/137 (24%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--------------- 52
+C NC + GH + C Q+ + R VG+ C C GH AR+C
Sbjct: 263 KCDNCGEMGHTRRGCKQEPATVER---VGVKCVICKEIGHRARDCIQPRIDKSGCRNCGH 319
Query: 53 --------ATESVTCYNC-SGQGHVAKDCTVK---SSIICYNCNSSGHFARNCPND---S 97
+ E V C C +GH++K+C ++ C NC +GH +R+CP + S
Sbjct: 320 AKQCPEPRSAEGVECKKCQQEEGHMSKECDKPRNMDNVTCRNCEKTGHMSRDCPEEKDWS 379
Query: 98 SKRCYACHQAGHMAKEC 114
+C C + GH + C
Sbjct: 380 KVQCTNCKEMGHTFRRC 396
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---TCYNCSGQ 65
C+NC GH+ CP+ A C+ C GH EC V TC C +
Sbjct: 52 CHNCGQPGHFSRECPEPRKASG-------ACFNCGEEGHNKAECPNPRVFKGTCRICQAE 104
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNC 93
GH A +C K +C NC GH ++C
Sbjct: 105 GHPAFECPDKGPDVCKNCKGEGHKTKDC 132
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 38 VCYKCNNYGHFARECATE---SVTCYNCSGQGHVAKDCTVKSSI--ICYNCNSSGHFARN 92
C+ C GHF+REC S C+NC +GH +C C C + GH A
Sbjct: 51 ACHNCGQPGHFSRECPEPRKASGACFNCGEEGHNKAECPNPRVFKGTCRICQAEGHPAFE 110
Query: 93 CPNDSSKRCYACHQAGHMAKEC 114
CP+ C C GH K+C
Sbjct: 111 CPDKGPDVCKNCKGEGHKTKDC 132
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 11/91 (12%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN--DSSKRCYACHQAGHMAKECP 115
T Y G V + ++ C+NC GHF+R CP +S C+ C + GH ECP
Sbjct: 30 TGYREEIPGSVGEGGKTNNNDACHNCGQPGHFSRECPEPRKASGACFNCGEEGHNKAECP 89
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
K TC +C +GH +++C
Sbjct: 90 NPRVFKG---------TCRICQAEGHPAFEC 111
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 44/97 (45%), Gaps = 15/97 (15%)
Query: 59 CYNCSGQGHVAKDCTV--KSSIICYNCNSSGHFARNCPNDSSKR--CYACHQAGHMAKEC 114
C+NC GH +++C K+S C+NC GH CPN + C C GH A EC
Sbjct: 52 CHNCGQPGHFSRECPEPRKASGACFNCGEEGHNKAECPNPRVFKGTCRICQAEGHPAFEC 111
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
P K P+ C C +GH + DC +K
Sbjct: 112 P----DKGPD-------VCKNCKGEGHKTKDCTENRK 137
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-TCYNCSGQGH 67
C+NC + GH + CP C C GH A EC + C NC G+GH
Sbjct: 75 CFNCGEEGHNKAECPNPRVFKG-------TCRICQAEGHPAFECPDKGPDVCKNCKGEGH 127
Query: 68 VAKDCT 73
KDCT
Sbjct: 128 KTKDCT 133
>gi|326437736|gb|EGD83306.1| hypothetical protein PTSG_03915 [Salpingoeca sp. ATCC 50818]
Length = 315
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 58/160 (36%), Gaps = 49/160 (30%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
S S +C+ C GH+Q CP + VC+KC YGH REC
Sbjct: 130 SPSESECHLCHGKGHFQARCPNTVPRN--------VCWKCGMYGHIGRECG--------- 172
Query: 63 SGQGHV-------------AKDCTVKSSIICYNCNSSGHFARNCPN---DSSKRCYACHQ 106
G G+ CY C GH A CP + K C+ C +
Sbjct: 173 GGMGYADPYAPHDPYGRPPYYGGGGGFDRTCYVCGERGHLAARCPRSTYNGEKLCHVCRK 232
Query: 107 AGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GH+A++C C +C +GH SYDC
Sbjct: 233 PGHIARDC----------------KLCRICLGEGHRSYDC 256
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 57/147 (38%), Gaps = 43/147 (29%)
Query: 36 GIVCYKCNNYGHFARECATES--------VTCYNCSGQGHVAKDC--TVKSSIICYNCNS 85
G CYKC GH A C + C+ C G+GH C TV ++ C+ C
Sbjct: 105 GRTCYKCGGQGHIAVMCPSPEGAKDSPSESECHLCHGKGHFQARCPNTVPRNV-CWKCGM 163
Query: 86 SGHFARNC-----------PNDS-------------SKRCYACHQAGHMAKECPGQTAGK 121
GH R C P+D + CY C + GH+A CP T
Sbjct: 164 YGHIGRECGGGMGYADPYAPHDPYGRPPYYGGGGGFDRTCYVCGERGHLAARCPRST--- 220
Query: 122 SPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+ C+VC GH++ DCKL
Sbjct: 221 -----YNGEKLCHVCRKPGHIARDCKL 242
>gi|147791391|emb|CAN59784.1| hypothetical protein VITISV_042163 [Vitis vinifera]
Length = 247
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 51/123 (41%), Gaps = 36/123 (29%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV------CYKCNNYGHFARECATESVT---- 58
CYNC GH C ++++ G G CY C GH AR+C+ S
Sbjct: 121 CYNCGGTGHLARDCVRRNNGGGGGGXGGGGGGGGGGCYTCGQPGHLARDCSRPSGGGGGG 180
Query: 59 ----CYNCSGQGHVAKDCTVKSSII----------------------CYNCNSSGHFARN 92
CYNC GH+A+DCT++S CYNC GHFAR
Sbjct: 181 GGGGCYNCGDYGHLARDCTLESGXAGRFGGGGGGGGGRFGGGGGGGGCYNCGQEGHFARE 240
Query: 93 CPN 95
CPN
Sbjct: 241 CPN 243
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 45/123 (36%), Gaps = 45/123 (36%)
Query: 38 VCYKCNNYGHFARECATES----------------VTCYNCSGQGHVAKDCTVKSSII-- 79
CY C GH AR+C + CY C GH+A+DC+ S
Sbjct: 120 ACYNCGGTGHLARDCVRRNNGGGGGGXGGGGGGGGGGCYTCGQPGHLARDCSRPSGGGGG 179
Query: 80 -----CYNCNSSGHFARNCPNDSSK----------------------RCYACHQAGHMAK 112
CYNC GH AR+C +S CY C Q GH A+
Sbjct: 180 GGGGGCYNCGDYGHLARDCTLESGXAGRFGGGGGGGGGRFGGGGGGGGCYNCGQEGHFAR 239
Query: 113 ECP 115
ECP
Sbjct: 240 ECP 242
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 10/92 (10%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
CYNC G GH+A+DC + N G CY C Q GH+A++C
Sbjct: 119 AACYNCGGTGHLARDCVRR------NNGGGGGGXGGGGGGGGGGCYTCGQPGHLARDC-- 170
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+ S CY CG GHL+ DC L
Sbjct: 171 --SRPSGGGGGGGGGGCYNCGDYGHLARDCTL 200
>gi|67478497|ref|XP_654640.1| zinc finger protein containing CCHC type domain [Entamoeba
histolytica HM-1:IMSS]
gi|56471707|gb|EAL49254.1| zinc finger protein containing CCHC type domain [Entamoeba
histolytica HM-1:IMSS]
gi|449708078|gb|EMD47605.1| zinc finger protein containing CCHC type domain containing protein
[Entamoeba histolytica KU27]
Length = 164
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 58 TCYNCSGQGHVAKDCTVKS---SIICYNCNSSGHFARNCPNDSSKR-----CYACHQAGH 109
C+ C GH K+C K+ ICYNC S H R+CP + + C+ CHQ GH
Sbjct: 15 ICFYCRQPGHCLKNCPKKAKGEDSICYNCGSHDHILRDCPEPRTGKLAFSTCFVCHQMGH 74
Query: 110 MAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
++++CP G P+ C CG H + DC +K
Sbjct: 75 ISRDCPNNPKGIYPQ-----GGGCRYCGDVNHFAKDCPNKRKK 112
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 18/116 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------TCYNC 62
C+ C GH +CP+K+ + +CY C ++ H R+C TC+ C
Sbjct: 16 CFYCRQPGHCLKNCPKKAKGEDS------ICYNCGSHDHILRDCPEPRTGKLAFSTCFVC 69
Query: 63 SGQGHVAKDCTVKSSII------CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAK 112
GH+++DC I C C HFA++CPN K+ Q +++K
Sbjct: 70 HQMGHISRDCPNNPKGIYPQGGGCRYCGDVNHFAKDCPNKRKKQTGDDDQDDYVSK 125
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 15/100 (15%)
Query: 38 VCYKCNNYGHFARECAT----ESVTCYNCSGQGHVAKDCTVKSS-----IICYNCNSSGH 88
+C+ C GH + C E CYNC H+ +DC + C+ C+ GH
Sbjct: 15 ICFYCRQPGHCLKNCPKKAKGEDSICYNCGSHDHILRDCPEPRTGKLAFSTCFVCHQMGH 74
Query: 89 FARNCPNDSSK------RCYACHQAGHMAKECPGQTAGKS 122
+R+CPN+ C C H AK+CP + ++
Sbjct: 75 ISRDCPNNPKGIYPQGGGCRYCGDVNHFAKDCPNKRKKQT 114
>gi|224120076|ref|XP_002318236.1| predicted protein [Populus trichocarpa]
gi|222858909|gb|EEE96456.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 59/148 (39%), Gaps = 29/148 (19%)
Query: 15 FGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES-----VTCYNCSGQGHVA 69
FG + P G K G C+ C H A+ C +S C C +GH
Sbjct: 57 FGRHPLRVP--------GMKPGDSCFICKAKDHIAKLCPQKSEWERNKICLLCRHRGHSL 108
Query: 70 KDCTVKSSII-----CYNCNSSGHFARNCPNDSSK------RCYACHQAGHMAKECPGQT 118
K C K+ CYNC GH CP C+ C++ GH++K+CP T
Sbjct: 109 KRCPNKNDETMDQKSCYNCGEKGHSLSQCPQPREDGGTKFANCFICNERGHLSKDCPKNT 168
Query: 119 AGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G P+ C VCG HL+ DC
Sbjct: 169 RGIYPK-----GGCCKVCGGVTHLARDC 191
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 50/125 (40%), Gaps = 23/125 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------ESVTCYNC 62
C+ C H CPQKS + +C C + GH + C + +CYNC
Sbjct: 73 CFICKAKDHIAKLCPQKSEWER-----NKICLLCRHRGHSLKRCPNKNDETMDQKSCYNC 127
Query: 63 SGQGHVAKDCTVKSS------IICYNCNSSGHFARNCPNDSSKR------CYACHQAGHM 110
+GH C C+ CN GH +++CP ++ C C H+
Sbjct: 128 GEKGHSLSQCPQPREDGGTKFANCFICNERGHLSKDCPKNTRGIYPKGGCCKVCGGVTHL 187
Query: 111 AKECP 115
A++CP
Sbjct: 188 ARDCP 192
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 17/100 (17%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-------ATESVTCYN 61
C C GH CP K+ D D+ CY C GH +C T+ C+
Sbjct: 98 CLLCRHRGHSLKRCPNKN--DETMDQKS--CYNCGEKGHSLSQCPQPREDGGTKFANCFI 153
Query: 62 CSGQGHVAKDCTVKSSII------CYNCNSSGHFARNCPN 95
C+ +GH++KDC + I C C H AR+CP+
Sbjct: 154 CNERGHLSKDCPKNTRGIYPKGGCCKVCGGVTHLARDCPD 193
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 10/74 (13%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYN------- 61
CYNC + GH CPQ G C+ CN GH +++C + Y
Sbjct: 124 CYNCGEKGHSLSQCPQPRED---GGTKFANCFICNERGHLSKDCPKNTRGIYPKGGCCKV 180
Query: 62 CSGQGHVAKDCTVK 75
C G H+A+DC K
Sbjct: 181 CGGVTHLARDCPDK 194
>gi|357516397|ref|XP_003628487.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355522509|gb|AET02963.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 544
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 37 IVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND 96
IVCYKC + GH + C + C+ C +GH DC + ++CYN N GH + C
Sbjct: 241 IVCYKCGDKGHKSNVCTKDEKKCFRCGQKGHTLADCK-RGDVVCYNYNEEGHISSQCTQP 299
Query: 97 SSKR 100
R
Sbjct: 300 KKVR 303
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
+ + I CY C D GH C + C++C GH +C V CYN
Sbjct: 237 APAEIVCYKCGDKGHKSNVCTKDEKK----------CFRCGQKGHTLADCKRGDVVCYNY 286
Query: 63 SGQGHVAKDCT 73
+ +GH++ CT
Sbjct: 287 NEEGHISSQCT 297
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 7/99 (7%)
Query: 16 GHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVK 75
G Q S P+ SA A K + N+ R A + CY C +GH + CT K
Sbjct: 205 GKGQQSRPKPYSAPADKGK-----QRLNDERRPNRRDAPAEIVCYKCGDKGHKSNVCT-K 258
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
C+ C GH +C CY ++ GH++ +C
Sbjct: 259 DEKKCFRCGQKGHTLADCKR-GDVVCYNYNEEGHISSQC 296
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 13/76 (17%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
+ I+CY C GH + C D K+C+ C Q GH +C + CY
Sbjct: 239 AEIVCYKCGDKGHKSNVCTKD-EKKCFRCGQKGHTLADCKRG------------DVVCYN 285
Query: 136 CGHQGHLSYDCKLVQK 151
+GH+S C +K
Sbjct: 286 YNEEGHISSQCTQPKK 301
>gi|358056756|dbj|GAA97419.1| hypothetical protein E5Q_04097 [Mixia osmundae IAM 14324]
Length = 735
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 49/122 (40%), Gaps = 37/122 (30%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSI-----------------ICYNCNSSGHFARNCPND- 96
++V C C QGH+AKDC + + +C+ C + GH C
Sbjct: 397 DTVKCGRCGEQGHIAKDCEHQQCMTCGAMDDHEFRDCPLLKVCWRCGNKGHTNGKCNMPV 456
Query: 97 SSKRCYACHQAGHMAKECPG------------QTAGKSPEPVVDMSLTCYVCGHQGHLSY 144
+S RC C+Q GH + CP TA K P P CY CGH+GH
Sbjct: 457 ASLRCPRCNQKGHASDNCPTIWRVYPELPLERHTAAK-PNPC------CYNCGHRGHFGE 509
Query: 145 DC 146
C
Sbjct: 510 QC 511
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 47/128 (36%), Gaps = 31/128 (24%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYG-HFARECATESVTCYNCSG 64
T++C C + GH C + C C H R+C V C+ C
Sbjct: 398 TVKCGRCGEQGHIAKDCEHQQ------------CMTCGAMDDHEFRDCPLLKV-CWRCGN 444
Query: 65 QGHVAKDCTVK-SSIICYNCNSSGHFARNCPN----------------DSSKRCYACHQA 107
+GH C + +S+ C CN GH + NCP + CY C
Sbjct: 445 KGHTNGKCNMPVASLRCPRCNQKGHASDNCPTIWRVYPELPLERHTAAKPNPCCYNCGHR 504
Query: 108 GHMAKECP 115
GH ++CP
Sbjct: 505 GHFGEQCP 512
>gi|224137012|ref|XP_002322472.1| predicted protein [Populus trichocarpa]
gi|222869468|gb|EEF06599.1| predicted protein [Populus trichocarpa]
Length = 278
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 21/139 (15%)
Query: 24 QKSSADARGDKVGIVCYKCNNYGHFARECA-----TESVTCYNCSGQGHVAKDCTVKSS- 77
+K G K G C+ C H A+ C ++ C C +GH K C K+
Sbjct: 63 RKQPLRVPGMKPGDSCFICKAKDHIAKLCPQKDEWEKNKICLLCRHRGHSLKRCPKKNDE 122
Query: 78 ----IICYNCNSSGHFARNCPNDSSK------RCYACHQAGHMAKECPGQTAGKSPEPVV 127
+CYNC +GH CP C+ C++ GH++K+CP T G P+
Sbjct: 123 TMDQKLCYNCGETGHSLSQCPQPREDGGTKFANCFICNERGHLSKDCPKNTRGIYPK--- 179
Query: 128 DMSLTCYVCGHQGHLSYDC 146
C +CG HL+ DC
Sbjct: 180 --GGCCKLCGGVTHLARDC 196
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 18/118 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-------ATESVTCYN 61
C C GH CP+K+ D D+ +CY C GH +C T+ C+
Sbjct: 103 CLLCRHRGHSLKRCPKKN--DETMDQK--LCYNCGETGHSLSQCPQPREDGGTKFANCFI 158
Query: 62 CSGQGHVAKDCTVKSSII------CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKE 113
C+ +GH++KDC + I C C H AR+CP D KR A G + +E
Sbjct: 159 CNERGHLSKDCPKNTRGIYPKGGCCKLCGGVTHLARDCP-DKGKRGDAAFGRGAIGRE 215
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 48/127 (37%), Gaps = 23/127 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA------TESVTCYNC 62
C+ C H CPQK + +C C + GH + C + CYNC
Sbjct: 78 CFICKAKDHIAKLCPQKDEWEK-----NKICLLCRHRGHSLKRCPKKNDETMDQKLCYNC 132
Query: 63 SGQGHVAKDCTVKSS------IICYNCNSSGHFARNCPNDSSKR------CYACHQAGHM 110
GH C C+ CN GH +++CP ++ C C H+
Sbjct: 133 GETGHSLSQCPQPREDGGTKFANCFICNERGHLSKDCPKNTRGIYPKGGCCKLCGGVTHL 192
Query: 111 AKECPGQ 117
A++CP +
Sbjct: 193 ARDCPDK 199
>gi|361127984|gb|EHK99936.1| putative DNA-binding protein HEXBP [Glarea lozoyensis 74030]
Length = 122
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVK-------SSIICYNCNSSGHFA 90
CYKC HFAR+C +++ CY C GH+++DCT + CY C +GH +
Sbjct: 31 TCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTSPNGGPLNTAGKTCYQCGEAGHIS 90
Query: 91 RNCPNDSS 98
R+CP ++
Sbjct: 91 RDCPQKAT 98
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
CY C HFAR+C + +CYAC + GH++++C G P+ TCY CG
Sbjct: 32 CYKCGGPNHFARDC-QAQAMKCYACGKLGHISRDCTSPNGG----PLNTAGKTCYQCGEA 86
Query: 140 GHLSYDC 146
GH+S DC
Sbjct: 87 GHISRDC 93
>gi|300720906|gb|ADK33576.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K I C+NC GH ARNCP K C+ C Q GH K+C G+ A
Sbjct: 382 KRIIKCFNCGKEGHIARNCPAPRKKGCWKCGQEGHQMKDCTGRQA 426
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 8/72 (11%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKE 113
+ C+NC +GH+A++C C+ C GH ++C + + + H+ G
Sbjct: 385 IKCFNCGKEGHIARNCPAPRKKGCWKCGQEGHQMKDCTGRQANFLGKIWPSHKGGR---- 440
Query: 114 CPGQTAGKSPEP 125
PG PEP
Sbjct: 441 -PGNFLQNRPEP 451
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
+G K I C+ C GH AR C A C+ C +GH KDCT
Sbjct: 379 KGPKRIIKCFNCGKEGHIARNCPAPRKKGCWKCGQEGHQMKDCT 422
>gi|195997645|ref|XP_002108691.1| hypothetical protein TRIADDRAFT_51887 [Trichoplax adhaerens]
gi|190589467|gb|EDV29489.1| hypothetical protein TRIADDRAFT_51887 [Trichoplax adhaerens]
Length = 361
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 56/127 (44%), Gaps = 22/127 (17%)
Query: 39 CYKCNNYGHFARECATES-VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN-- 95
C+ C GH + +C + +TC C GH C + CY C+ GH + CPN
Sbjct: 130 CHICLELGHLSYQCPMKKKMTCRICGEIGHKLNSC---PNQFCYKCDQQGHRGKECPNGL 186
Query: 96 --DSSKRCYACHQAGHMAKECPGQ-----------TAGKSPEPVVDMS---LTCYVCGHQ 139
D K C C GH+ KECP + K P+ +++ + CY CG +
Sbjct: 187 AKDKRKTCRRCFMRGHVEKECPDRWRQYYATTKFGPPKKPPDELLNAQNPRVYCYNCGKK 246
Query: 140 GHLSYDC 146
GH ++C
Sbjct: 247 GHYGHEC 253
>gi|357605694|gb|EHJ64745.1| hypothetical protein KGM_00989 [Danaus plexippus]
Length = 1150
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 50/126 (39%), Gaps = 19/126 (15%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGH----FARNCP 94
C CN GH C + C+ C GH C K IC NC S + RNC
Sbjct: 510 CNYCNRAGHRDDACHFKPPVCFMCGDAGHYEPRCPRK---ICVNCGSPNYVYSTMCRNCS 566
Query: 95 NDSSKRCYACHQAGHMAKECP-------GQTAGKSP-----EPVVDMSLTCYVCGHQGHL 142
+C C Q+GH A CP + ++P + + + C C +GHL
Sbjct: 567 TWKCIKCAECDQSGHPASHCPDVWRRYHDTLSLETPLEENRQTKKNHQMFCSGCTRRGHL 626
Query: 143 SYDCKL 148
+ C+L
Sbjct: 627 VHTCRL 632
>gi|357518027|ref|XP_003629302.1| Major cold-shock protein [Medicago truncatula]
gi|355523324|gb|AET03778.1| Major cold-shock protein [Medicago truncatula]
Length = 329
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 62/181 (34%), Gaps = 60/181 (33%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGI-------VCYKCNNYGHFAREC--------- 52
CY C D GH C + D G CY C ++ HFAR+C
Sbjct: 105 CYTCGDTGHIARDCDRSDRNDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMRGGGNNNN 164
Query: 53 -----ATESVTCYNCSGQGHVAKDCTVKSS-----IICYNCNSSGHFARNCPNDSSK--- 99
+CY C G GH+A+DC SS CY C GH AR+C N+ +
Sbjct: 165 GGGGYGGGGTSCYRCGGVGHIARDCATPSSGGGGGGACYKCGEVGHIARDCSNEGGRFDG 224
Query: 100 -------------------------------RCYACHQAGHMAKECPGQTAGKSPEPVVD 128
C+ C +AGH A++C + G +
Sbjct: 225 GNGRYDDGNGRFGGGNRRFGSGGGGHDGGKGTCFNCGKAGHFARDCVEASVGNLKAHTLS 284
Query: 129 M 129
M
Sbjct: 285 M 285
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 42/117 (35%), Gaps = 35/117 (29%)
Query: 59 CYNCSGQGHVAKDCTVKSS----------------IICYNCNSSGHFARNCPNDSSKR-- 100
CY C GH+A+DC CY C S HFAR+C
Sbjct: 105 CYTCGDTGHIARDCDRSDRNDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMRGGGNNNN 164
Query: 101 -----------CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C GH+A++C +P CY CG GH++ DC
Sbjct: 165 GGGGYGGGGTSCYRCGGVGHIARDCA------TPSSGGGGGGACYKCGEVGHIARDC 215
>gi|912562|gb|AAB38057.1| gag polyprotein, partial [Human immunodeficiency virus 1]
Length = 462
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ I C+NC+ GH ARNC + C+ C Q GH KECPG+ A
Sbjct: 386 QRKIKCFNCSKEGHLARNCRAPRKRGCWKCGQEGHQMKECPGRQA 430
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKE 113
+ C+NCS +GH+A++C C+ C GH + CP + + + H+
Sbjct: 389 IKCFNCSKEGHLARNCRAPRKRGCWKCGQEGHQMKECPGRQANFLGKIWPSHKGR----- 443
Query: 114 CPGQTAGKSPEP 125
PG PEP
Sbjct: 444 -PGNFLQNRPEP 454
Score = 38.5 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
I C+ C+ GH AR C A C+ C +GH K+C
Sbjct: 389 IKCFNCSKEGHLARNCRAPRKRGCWKCGQEGHQMKEC 425
>gi|156544377|ref|XP_001607405.1| PREDICTED: hypothetical protein LOC100123711 [Nasonia vitripennis]
Length = 531
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 59 CYNCSGQGHVAKDC-----TVKSSIICYNCNSSGHFARNCPNDSSK-----RCYACHQAG 108
C++C GH DC + IC+ C S+ H C + S +C+ C + G
Sbjct: 394 CFHCRKAGHNLSDCPELGKEEAGTGICFKCGSTEHTHFECKVNKSDDYRYAKCFICREQG 453
Query: 109 HMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
H+AK+CP G P+ +C +CG HL DC
Sbjct: 454 HIAKQCPDNPKGLYPD-----GGSCKICGDVTHLKKDC 486
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 25/113 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C++C GH CP+ +A +C+KC + H EC N S
Sbjct: 394 CFHCRKAGHNLSDCPELGKEEAGTG----ICFKCGSTEHTHFECKV------NKSDDYRY 443
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPND------SSKRCYACHQAGHMAKECP 115
AK C+ C GH A+ CP++ C C H+ K+CP
Sbjct: 444 AK---------CFICREQGHIAKQCPDNPKGLYPDGGSCKICGDVTHLKKDCP 487
>gi|294911979|ref|XP_002778112.1| hypothetical protein Pmar_PMAR018551 [Perkinsus marinus ATCC 50983]
gi|239886233|gb|EER09907.1| hypothetical protein Pmar_PMAR018551 [Perkinsus marinus ATCC 50983]
Length = 2329
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 14/75 (18%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKECPGQTAGKSPEPVVDMSL 131
+ SI CY C GH ARNC ND K RC C H +C V +
Sbjct: 752 QQSITCYRCLQDGHPARNCTNDIGKKDERCIRCGNPTHTIDKCN-----------VSTTA 800
Query: 132 TCYVCGHQGHLSYDC 146
TC+ CG +GHL+Y C
Sbjct: 801 TCHRCGREGHLAYVC 815
Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 33 DKVGIVCYKCNNYGHFARECATE----SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGH 88
D+ I CY+C GH AR C + C C H C V ++ C+ C GH
Sbjct: 751 DQQSITCYRCLQDGHPARNCTNDIGKKDERCIRCGNPTHTIDKCNVSTTATCHRCGREGH 810
Query: 89 FARNCPN 95
A CP+
Sbjct: 811 LAYVCPD 817
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Query: 6 TIQCYNCFDFGHYQYSCPQK-SSADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCS 63
+I CY C GH +C D R C +C N H +C + + TC+ C
Sbjct: 754 SITCYRCLQDGHPARNCTNDIGKKDER-------CIRCGNPTHTIDKCNVSTTATCHRCG 806
Query: 64 GQGHVAKDC 72
+GH+A C
Sbjct: 807 REGHLAYVC 815
>gi|357145183|ref|XP_003573554.1| PREDICTED: glycine-rich protein 2b-like isoform 1 [Brachypodium
distachyon]
gi|357145187|ref|XP_003573555.1| PREDICTED: glycine-rich protein 2b-like isoform 2 [Brachypodium
distachyon]
gi|357145190|ref|XP_003573556.1| PREDICTED: glycine-rich protein 2b-like isoform 3 [Brachypodium
distachyon]
Length = 257
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 45/117 (38%), Gaps = 40/117 (34%)
Query: 38 VCYKCNNYGHFARECATES-----------VTCYNCSGQGHVAKDCTVKSSII------- 79
C+KC GH AR+C + CYNC GH+A+DC
Sbjct: 139 ACFKCGEPGHMARDCFVSAPGGGGGGGGGGGACYNCGEPGHLARDCPTNGGGFRSGGGGG 198
Query: 80 ----CYNCNSSGHFARNCPND------------------SSKRCYACHQAGHMAKEC 114
CYNC GH AR+CP + CY C + GHMA++C
Sbjct: 199 GGGNCYNCGEPGHLARDCPTNGGFGGGGGGGRFGGGGGGGGGNCYNCGEPGHMARDC 255
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 28/117 (23%)
Query: 58 TCYNCSGQGHVAKDCTVKSSI----------ICYNCNSSGHFARNCPND----------- 96
C+ C GH+A+DC V + CYNC GH AR+CP +
Sbjct: 139 ACFKCGEPGHMARDCFVSAPGGGGGGGGGGGACYNCGEPGHLARDCPTNGGGFRSGGGGG 198
Query: 97 SSKRCYACHQAGHMAKECPGQ-------TAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C + GH+A++CP G+ CY CG GH++ DC
Sbjct: 199 GGGNCYNCGEPGHLARDCPTNGGFGGGGGGGRFGGGGGGGGGNCYNCGEPGHMARDC 255
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 33/86 (38%), Gaps = 21/86 (24%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIV--CYKCNNYGHFARECATESV--------- 57
CYNC + GH CP G G CY C GH AR+C T
Sbjct: 171 CYNCGEPGHLARDCPTNGGGFRSGGGGGGGGNCYNCGEPGHLARDCPTNGGFGGGGGGGR 230
Query: 58 ----------TCYNCSGQGHVAKDCT 73
CYNC GH+A+DCT
Sbjct: 231 FGGGGGGGGGNCYNCGEPGHMARDCT 256
>gi|294894916|ref|XP_002775016.1| hypothetical protein Pmar_PMAR002201 [Perkinsus marinus ATCC 50983]
gi|239880799|gb|EER06832.1| hypothetical protein Pmar_PMAR002201 [Perkinsus marinus ATCC 50983]
Length = 1541
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 14/75 (18%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKECPGQTAGKSPEPVVDMSL 131
+ SI CY C GH ARNC ND K RC C H +C V +
Sbjct: 282 QQSITCYRCLQDGHPARNCTNDIGKKDERCIRCGNPTHTIDKCN-----------VSTTA 330
Query: 132 TCYVCGHQGHLSYDC 146
TC+ CG +GHL+Y C
Sbjct: 331 TCHRCGREGHLAYVC 345
Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 33 DKVGIVCYKCNNYGHFARECATE----SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGH 88
D+ I CY+C GH AR C + C C H C V ++ C+ C GH
Sbjct: 281 DQQSITCYRCLQDGHPARNCTNDIGKKDERCIRCGNPTHTIDKCNVSTTATCHRCGREGH 340
Query: 89 FARNCPN 95
A CP+
Sbjct: 341 LAYVCPD 347
Score = 39.3 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Query: 6 TIQCYNCFDFGHYQYSCPQK-SSADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCS 63
+I CY C GH +C D R C +C N H +C + + TC+ C
Sbjct: 284 SITCYRCLQDGHPARNCTNDIGKKDER-------CIRCGNPTHTIDKCNVSTTATCHRCG 336
Query: 64 GQGHVAKDC 72
+GH+A C
Sbjct: 337 REGHLAYVC 345
>gi|374349456|gb|AEZ35326.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 491
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K S+ C+NC GH ARNC K C+ C + GH K+CPG+ A
Sbjct: 378 KRSVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCPGRQA 422
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 14/104 (13%)
Query: 25 KSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCN 84
K A+A K + + +N+ F R SV C+NC +GH+A++C C+ C
Sbjct: 354 KVLAEAMSQKQQCIMMQRSNFKGFKR-----SVKCFNCGKEGHIARNCRAPRKKGCWKCG 408
Query: 85 SSGHFARNCPNDSSK---RCYACHQAGHMAKECPGQTAGKSPEP 125
GH ++CP + + + H+ PG PEP
Sbjct: 409 KEGHQMKDCPGRQANFLGKIWPSHKGR------PGNFLQSRPEP 446
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 22 CPQKSSADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
C ++ +G K + C+ C GH AR C A C+ C +GH KDC
Sbjct: 366 CIMMQRSNFKGFKRSVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDC 417
>gi|449456813|ref|XP_004146143.1| PREDICTED: cold shock protein 1-like [Cucumis sativus]
Length = 273
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 57/149 (38%), Gaps = 43/149 (28%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------------ES 56
CY C + GH C + S+ G C+ C GH AR+C
Sbjct: 123 CYQCGEQGHLARDCTRPSNRGGGGGGG-GGCFTCGEVGHLARDCPRGNSGGGGGGGGGGG 181
Query: 57 VTCYNCSGQGHVAKDCT----------VKSSIICYNCNSSGHFARNCPNDSS-------- 98
CYNC G GH+A+DC C+NC GH AR+C N+S
Sbjct: 182 GACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGG 241
Query: 99 ------------KRCYACHQAGHMAKECP 115
C+ C ++GH A+ECP
Sbjct: 242 RFGGGGGGGGGSNTCFNCGKSGHFARECP 270
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 20/108 (18%)
Query: 59 CYNCSGQGHVAKDCTVKSS--------IICYNCNSSGHFARNCPNDSSKR---------- 100
CY C QGH+A+DCT S+ C+ C GH AR+CP +S
Sbjct: 123 CYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGG 182
Query: 101 -CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
CY C GH+A++C + C+ CG GH++ DC+
Sbjct: 183 ACYNCGGFGHLARDC-NRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQ 229
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 33/122 (27%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGI--VCYKCNNYGHFAREC-----------ATE 55
C+ C + GH CP+ +S G G CY C +GH AR+C
Sbjct: 152 CFTCGEVGHLARDCPRGNSGGGGGGGGGGGGACYNCGGFGHLARDCNRGGAGGGSGGGGG 211
Query: 56 SVTCYNCSGQGHVAKDCTVKSSI--------------------ICYNCNSSGHFARNCPN 95
C+NC GH+A+DC +S C+NC SGHFAR CP+
Sbjct: 212 GGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPD 271
Query: 96 DS 97
S
Sbjct: 272 AS 273
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 58/147 (39%), Gaps = 39/147 (26%)
Query: 39 CYKCNNYGHFARECATES---------VTCYNCSGQGHVAKDCTVKSSI----------- 78
CY+C GH AR+C S C+ C GH+A+DC +S
Sbjct: 123 CYQCGEQGHLARDCTRPSNRGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGGGGGG 182
Query: 79 ICYNCNSSGHFARNCPNDSSKR----------CYACHQAGHMAKECPGQTAGKSPEPVVD 128
CYNC GH AR+C + C+ C + GH+A++C ++ G
Sbjct: 183 ACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGR 242
Query: 129 MSL---------TCYVCGHQGHLSYDC 146
TC+ CG GH + +C
Sbjct: 243 FGGGGGGGGGSNTCFNCGKSGHFAREC 269
>gi|358339850|dbj|GAA47835.1| zinc finger CCHC domain-containing protein 7 [Clonorchis sinensis]
Length = 825
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
VC C GHF EC V C C +GH+ ++C +I C+ C + GH ++C S
Sbjct: 338 VCANCRKRGHFTSECRASDVVCIFCGIEGHMKENC---GNIYCFACLAPGHTKKSCTLLS 394
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSL---TCYVCGHQGHLSYDCK 147
+ C + G + T+ P P+ L C CG +GH C+
Sbjct: 395 RLKQSVCDRCGLQGHQ--SHTSVGKPVPIPAKMLGHRGCCNCGRRGHTIEQCR 445
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 12/89 (13%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
+ C NC +GH +C S ++C C GH NC N C+AC GH K C
Sbjct: 336 NAVCANCRKRGHFTSECRA-SDVVCIFCGIEGHMKENCGN---IYCFACLAPGHTKKSCT 391
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSY 144
+ K C CG QGH S+
Sbjct: 392 LLSRLKQS--------VCDRCGLQGHQSH 412
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 27/73 (36%), Gaps = 15/73 (20%)
Query: 79 ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGH 138
+C NC GHF C S C C GHM + C ++ C+ C
Sbjct: 338 VCANCRKRGHFTSEC-RASDVVCIFCGIEGHMKENCG--------------NIYCFACLA 382
Query: 139 QGHLSYDCKLVQK 151
GH C L+ +
Sbjct: 383 PGHTKKSCTLLSR 395
>gi|321468633|gb|EFX79617.1| hypothetical protein DAPPUDRAFT_244816 [Daphnia pulex]
Length = 2274
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 46/121 (38%), Gaps = 39/121 (32%)
Query: 39 CYKCNNYGHFARECATE-----------------SVTCYNCSGQGHVAKDCTVKSSII-- 79
C+KCN GH + C T+ + TCY C+ +GH++ +C +
Sbjct: 679 CFKCNEEGHMSYNCPTDPNRGRGGGRGGGRGGGSTRTCYKCNEEGHLSYNCPTGPTRGRG 738
Query: 80 ------------CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVV 127
C+ CN GHF+ NCPN S+ G A+ P + G
Sbjct: 739 GGRGGGGGSTRPCFKCNQEGHFSYNCPNPST--------GGRGARNSPASSYGAPSSSAF 790
Query: 128 D 128
D
Sbjct: 791 D 791
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 19/86 (22%)
Query: 80 CYNCNSSGHFARNCPND----------------SSKRCYACHQAGHMAKECPGQTAGKSP 123
C+ CN GH + NCP D S++ CY C++ GH++ CP
Sbjct: 679 CFKCNEEGHMSYNCPTDPNRGRGGGRGGGRGGGSTRTCYKCNEEGHLSYNCPTGPTRGRG 738
Query: 124 EPVVDMSLT---CYVCGHQGHLSYDC 146
+ C+ C +GH SY+C
Sbjct: 739 GGRGGGGGSTRPCFKCNQEGHFSYNC 764
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 5 STIQCYNCFDFGHYQYSC-----PQKSSADARGDKVGIVCYKCNNYGHFARECATES 56
ST CY C + GH Y+C + G C+KCN GHF+ C S
Sbjct: 712 STRTCYKCNEEGHLSYNCPTGPTRGRGGGRGGGGGSTRPCFKCNQEGHFSYNCPNPS 768
>gi|912570|gb|AAB38061.1| gag polyprotein, partial [Human immunodeficiency virus 1]
Length = 462
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ I C+NC GH ARNC + C+ C Q GH KECPG+ A
Sbjct: 386 QRKIKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKECPGRQA 430
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKE 113
+ C+NC +GH+A++C C+ C GH + CP + + + H+
Sbjct: 389 IKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKECPGRQANFLGKIWPSHKGR----- 443
Query: 114 CPGQTAGKSPEP 125
PG PEP
Sbjct: 444 -PGNFLQNRPEP 454
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
I C+ C GH AR C A C+ C +GH K+C
Sbjct: 389 IKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKEC 425
>gi|395146475|gb|AFN53632.1| actin-depolymerizing factor 12 [Linum usitatissimum]
Length = 359
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 59/133 (44%), Gaps = 23/133 (17%)
Query: 32 GDKVGIVCYKCNNYGHFARECATESV-----TCYNCSGQGHVAKDCTVKS-------SII 79
G K G CY C H A+ C ++ C C +GH K C K + +
Sbjct: 71 GMKPGDSCYICKAVDHIAKLCPQKAEWERDKICLLCRQRGHSLKRCPNKRDGDESIGAKL 130
Query: 80 CYNCNSSGHFARNCPN---DSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTC 133
CYNC +GH NC D + C+ C++ GH++K+CP G P+ +C
Sbjct: 131 CYNCGETGHSLANCSQPIQDGGTKYASCFVCNEQGHLSKDCPKNANGIYPK-----GGSC 185
Query: 134 YVCGHQGHLSYDC 146
+CG HL+ DC
Sbjct: 186 KICGGVTHLARDC 198
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 18/106 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGI-VCYKCNNYGHFARECA-------TESVTCY 60
C C GH CP K D + +G +CY C GH C+ T+ +C+
Sbjct: 103 CLLCRQRGHSLKRCPNKRDGD---ESIGAKLCYNCGETGHSLANCSQPIQDGGTKYASCF 159
Query: 61 NCSGQGHVAKDCTVKSSII------CYNCNSSGHFARNCPNDSSKR 100
C+ QGH++KDC ++ I C C H AR+CP D +KR
Sbjct: 160 VCNEQGHLSKDCPKNANGIYPKGGSCKICGGVTHLARDCP-DKAKR 204
>gi|67472483|ref|XP_652045.1| zinc finger protein [Entamoeba histolytica HM-1:IMSS]
gi|56468849|gb|EAL46657.1| zinc finger protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 391
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 79 ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGH 138
+C+ C GH R+C K C+ C + GH+ K CP Q +S + V TCY CG
Sbjct: 302 VCFKCGKPGHIGRDCSQPDDKVCFHCGKLGHIGKNCPEQEVPESSDQV-----TCYKCGQ 356
Query: 139 QGHLSYDC 146
GH S DC
Sbjct: 357 VGHKSVDC 364
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN----DSSKR--CYACHQAGHMA 111
C+ C GH+ +DC+ +C++C GH +NCP +SS + CY C Q GH +
Sbjct: 302 VCFKCGKPGHIGRDCSQPDDKVCFHCGKLGHIGKNCPEQEVPESSDQVTCYKCGQVGHKS 361
Query: 112 KECPGQTAG 120
+CP T G
Sbjct: 362 VDCPENTEG 370
>gi|449707704|gb|EMD47315.1| cellular nucleic acid binding protein, putative [Entamoeba
histolytica KU27]
Length = 396
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 79 ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGH 138
+C+ C GH R+C K C+ C + GH+ K CP Q +S + V TCY CG
Sbjct: 307 VCFKCGKPGHIGRDCSQPDDKVCFHCGKLGHIGKNCPEQEVPESSDQV-----TCYKCGQ 361
Query: 139 QGHLSYDC 146
GH S DC
Sbjct: 362 VGHKSVDC 369
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN----DSSKR--CYACHQAGHMA 111
C+ C GH+ +DC+ +C++C GH +NCP +SS + CY C Q GH +
Sbjct: 307 VCFKCGKPGHIGRDCSQPDDKVCFHCGKLGHIGKNCPEQEVPESSDQVTCYKCGQVGHKS 366
Query: 112 KECPGQTAG 120
+CP T G
Sbjct: 367 VDCPENTEG 375
>gi|912574|gb|AAB38063.1| gag polyprotein, partial [Human immunodeficiency virus 1]
Length = 462
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ I C+NC GH ARNC + C+ C Q GH KECPG+ A
Sbjct: 386 QRKIKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKECPGRQA 430
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKE 113
+ C+NC +GH+A++C C+ C GH + CP + + + H+
Sbjct: 389 IKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKECPGRQANFLGKIWPSHKGR----- 443
Query: 114 CPGQTAGKSPEP 125
PG PEP
Sbjct: 444 -PGNFLQNRPEP 454
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
I C+ C GH AR C A C+ C +GH K+C
Sbjct: 389 IKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKEC 425
>gi|912566|gb|AAB38059.1| gag polyprotein, partial [Human immunodeficiency virus 1]
Length = 462
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ I C+NC GH ARNC + C+ C Q GH KECPG+ A
Sbjct: 386 QRKIKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKECPGRQA 430
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKE 113
+ C+NC +GH+A++C C+ C GH + CP + + + H+
Sbjct: 389 IKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKECPGRQANFLGKIWPSHKGR----- 443
Query: 114 CPGQTAGKSPEP 125
PG PEP
Sbjct: 444 -PGNFLQNRPEP 454
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
I C+ C GH AR C A C+ C +GH K+C
Sbjct: 389 IKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKEC 425
>gi|912554|gb|AAB38053.1| gag polyprotein, partial [Human immunodeficiency virus 1]
gi|912564|gb|AAB38058.1| gag polyprotein, partial [Human immunodeficiency virus 1]
Length = 462
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ I C+NC GH ARNC + C+ C Q GH KECPG+ A
Sbjct: 386 QRKIKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKECPGRQA 430
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKE 113
+ C+NC +GH+A++C C+ C GH + CP + + + H+
Sbjct: 389 IKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKECPGRQANFLGKIWPSHKGR----- 443
Query: 114 CPGQTAGKSPEP 125
PG PEP
Sbjct: 444 -PGNFLQNRPEP 454
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
I C+ C GH AR C A C+ C +GH K+C
Sbjct: 389 IKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKEC 425
>gi|912556|gb|AAB38054.1| gag polyprotein, partial [Human immunodeficiency virus 1]
Length = 462
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ I C+NC GH ARNC + C+ C Q GH KECPG+ A
Sbjct: 386 QRKIKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKECPGRQA 430
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKE 113
+ C+NC +GH+A++C C+ C GH + CP + + + H+
Sbjct: 389 IKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKECPGRQANFLGKIWPSHKGR----- 443
Query: 114 CPGQTAGKSPEP 125
PG PEP
Sbjct: 444 -PGNFLQNRPEP 454
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
I C+ C GH AR C A C+ C +GH K+C
Sbjct: 389 IKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKEC 425
>gi|326417127|gb|ADZ73405.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 25/42 (59%)
Query: 78 IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
I C+NC GH ARNC K C+ C Q GH K+CPG+ A
Sbjct: 388 IKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKDCPGRQA 429
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 15/75 (20%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC-- 114
+ C+NC +GH+A++C C+ C GH ++CP QA + K
Sbjct: 388 IKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKDCPG---------RQANFLGKIWPS 438
Query: 115 ----PGQTAGKSPEP 125
PG PEP
Sbjct: 439 NKGRPGNFPQSRPEP 453
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS-----IICYNCNSSGHFA 90
I C+ C GH AR C A C+ C +GH KDC + + I N G+F
Sbjct: 388 IKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKDCPGRQANFLGKIWPSNKGRPGNFP 447
Query: 91 RNCPNDSS 98
++ P S+
Sbjct: 448 QSRPEPSA 455
>gi|395146534|gb|AFN53688.1| putative actin-depolymerizing factor 12 [Linum usitatissimum]
Length = 388
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 59/133 (44%), Gaps = 23/133 (17%)
Query: 32 GDKVGIVCYKCNNYGHFARECATESV-----TCYNCSGQGHVAKDCTVKS-------SII 79
G K G CY C H A+ C ++ C C +GH K C K + +
Sbjct: 68 GMKPGDSCYICKAVDHIAKLCPQKAEWERDKICLLCRQRGHSLKRCPNKRDGDESVGAKL 127
Query: 80 CYNCNSSGHFARNCPN---DSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTC 133
CYNC +GH NC D + C+ C++ GH++K+CP G P+ +C
Sbjct: 128 CYNCGETGHSLANCSQPIQDGGTKYASCFVCNEQGHLSKDCPKNANGIYPK-----GGSC 182
Query: 134 YVCGHQGHLSYDC 146
+CG HL+ DC
Sbjct: 183 KICGGVTHLARDC 195
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 18/106 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGI-VCYKCNNYGHFARECA-------TESVTCY 60
C C GH CP K D + VG +CY C GH C+ T+ +C+
Sbjct: 100 CLLCRQRGHSLKRCPNKRDGD---ESVGAKLCYNCGETGHSLANCSQPIQDGGTKYASCF 156
Query: 61 NCSGQGHVAKDCTVKSSII------CYNCNSSGHFARNCPNDSSKR 100
C+ QGH++KDC ++ I C C H AR+CP D +KR
Sbjct: 157 VCNEQGHLSKDCPKNANGIYPKGGSCKICGGVTHLARDCP-DKAKR 201
>gi|241742586|ref|XP_002412390.1| zinc-finger protein, putative [Ixodes scapularis]
gi|215505716|gb|EEC15210.1| zinc-finger protein, putative [Ixodes scapularis]
Length = 481
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 59 CYNCSGQGHVAKDCTV------KSSIICYNCNSSGHFARNCPNDSSK-------RCYACH 105
C+ C GH +DC V ++ IC+ C S+ HF+ C +S +C+ C
Sbjct: 337 CFKCRQPGHRVQDCPVMLGDSDQAVGICFKCGSTEHFSSACAVRTSASNEFPFAKCFICQ 396
Query: 106 QAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
Q GH++++CP G P C CG H +C ++++
Sbjct: 397 QQGHLSRKCPQNEKGAYPR-----GGHCNFCGAVDHFKRECPEMERN 438
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 22/113 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C+ C GH CP D+ +C+KC + HF+ CA + + S +
Sbjct: 337 CFKCRQPGHRVQDCPVML---GDSDQAVGICFKCGSTEHFSSACAVRT----SASNEFPF 389
Query: 69 AKDCTVKSSIICYNCNSSGHFARNCPNDSS------KRCYACHQAGHMAKECP 115
AK C+ C GH +R CP + C C H +ECP
Sbjct: 390 AK---------CFICQQQGHLSRKCPQNEKGAYPRGGHCNFCGAVDHFKRECP 433
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Query: 79 ICYNCNSSGHFARNCP---NDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLT 132
+C+ C GH ++CP DS + C+ C H + C +T+ + P
Sbjct: 336 LCFKCRQPGHRVQDCPVMLGDSDQAVGICFKCGSTEHFSSACAVRTSASNEFPFA----K 391
Query: 133 CYVCGHQGHLSYDCKLVQK 151
C++C QGHLS C +K
Sbjct: 392 CFICQQQGHLSRKCPQNEK 410
>gi|212721230|ref|NP_001132383.1| actin depolymerizing factor [Zea mays]
gi|194694234|gb|ACF81201.1| unknown [Zea mays]
gi|414585937|tpg|DAA36508.1| TPA: actin depolymerizing factor [Zea mays]
Length = 276
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 56/130 (43%), Gaps = 20/130 (15%)
Query: 32 GDKVGIVCYKCNNYGHFARECATESV-----TCYNCSGQGHVAKDCTVKSS----IICYN 82
G + G C+ C + H A+ C +++ C C +GH K+C KS CYN
Sbjct: 64 GMRPGERCFICKSTDHVAKACPEKALWDKKKICLLCRERGHSLKNCPDKSEGNLMKFCYN 123
Query: 83 CNSSGHFARNCPNDSSK------RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVC 136
C SGH CP C+ C+Q GH++K CP G P+ C VC
Sbjct: 124 CGESGHSLSKCPKPIENGGTNFASCFICNQQGHLSKNCPENKHGIYPK-----GGCCKVC 178
Query: 137 GHQGHLSYDC 146
G HL+ C
Sbjct: 179 GEVTHLARHC 188
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 22/127 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT-----CYNC 62
+C+ C H +CP+K+ D + +C C GH + C +S CYNC
Sbjct: 70 RCFICKSTDHVAKACPEKALWDKK-----KICLLCRERGHSLKNCPDKSEGNLMKFCYNC 124
Query: 63 SGQGHVAKDCTVKSS------IICYNCNSSGHFARNCPNDSSKR------CYACHQAGHM 110
GH C C+ CN GH ++NCP + C C + H+
Sbjct: 125 GESGHSLSKCPKPIENGGTNFASCFICNQQGHLSKNCPENKHGIYPKGGCCKVCGEVTHL 184
Query: 111 AKECPGQ 117
A+ CP +
Sbjct: 185 ARHCPNK 191
>gi|118344198|ref|NP_001071924.1| zinc finger protein [Ciona intestinalis]
gi|92081548|dbj|BAE93321.1| zinc finger protein [Ciona intestinalis]
Length = 432
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 54/126 (42%), Gaps = 20/126 (15%)
Query: 42 CNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII-CYNCNSSGHFARNCPN--DSS 98
N Y R +V C NC GH+A +C+ + C+ C GH A+ CP S
Sbjct: 166 LNKYRDTRRYFGDSNVRCKNCDLTGHIANECSKPKKVKPCFQCGIKGHMAKFCPKHIPVS 225
Query: 99 KR-----CYACHQAGHMAKECPG--------QTAGKSPEPVVDMSLT----CYVCGHQGH 141
+R C C Q GH+ ECP AG + + ++ CY CG +GH
Sbjct: 226 RRHLSFSCNRCEQMGHIQSECPDLWRQYHKTTKAGSLVTSSLPLPMSKKKCCYNCGKRGH 285
Query: 142 LSYDCK 147
+DCK
Sbjct: 286 FGFDCK 291
>gi|226495947|ref|NP_001141714.1| uncharacterized protein LOC100273843 [Zea mays]
gi|194705650|gb|ACF86909.1| unknown [Zea mays]
Length = 303
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 49/125 (39%), Gaps = 47/125 (37%)
Query: 38 VCYKCNNYGHFARECATESVT----------------------CYNCSGQGHVAKDCT-- 73
CYKC GH AR+C + C+ C GH+A+DC+
Sbjct: 178 ACYKCGEPGHMARDCPSADGGGGYGGGGYGGGGYGGGGGGGGGCFKCGEPGHMARDCSSG 237
Query: 74 --------VKSSIICYNCNSSGHFARNCPN---------------DSSKRCYACHQAGHM 110
CYNC +GH AR+CP+ + CY C +AGH+
Sbjct: 238 GGGYGGGGGGGGGGCYNCGQAGHMARDCPSGGGSGGGRFGGGGGGGGDRSCYNCGEAGHI 297
Query: 111 AKECP 115
A++CP
Sbjct: 298 ARDCP 302
>gi|213138374|gb|ACJ44847.1| gag protein [Human immunodeficiency virus 1]
Length = 490
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K + C+NC GH A+NC K C+ C Q GH KECPG+ A
Sbjct: 381 KRIVKCFNCGKEGHIAKNCRAPRKKGCWECGQEGHQMKECPGRQA 425
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 15/79 (18%)
Query: 53 ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMA- 111
A V C+NC +GH+AK+C C+ C GH + CP QA +
Sbjct: 380 AKRIVKCFNCGKEGHIAKNCRAPRKKGCWECGQEGHQMKECPG---------RQANFLGK 430
Query: 112 -----KECPGQTAGKSPEP 125
K PG PEP
Sbjct: 431 IWPSNKGRPGNFLQSRPEP 449
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
++ +G K + C+ C GH A+ C A C+ C +GH K+C
Sbjct: 375 SNFKGAKRIVKCFNCGKEGHIAKNCRAPRKKGCWECGQEGHQMKEC 420
>gi|270011877|gb|EFA08325.1| hypothetical protein TcasGA2_TC005967 [Tribolium castaneum]
Length = 486
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 21/112 (18%)
Query: 48 FARECATESVTCYNCSGQGHVAKDC--------TVKSSIICYNCNSSGHFARNCPNDSSK 99
FARE + C+NC GH +C + IC+ C S+ H C +
Sbjct: 330 FARE---KKKVCFNCRKSGHNLSECPELGKEIAESSGTGICFKCGSTEHTHFECKVVRGQ 386
Query: 100 -----RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+C+ CH+ GH+A++CP G P+ C VCG HL DC
Sbjct: 387 EFKFAQCFICHEQGHIARQCPDNARGLYPK-----GGACKVCGDVTHLKKDC 433
>gi|326502466|dbj|BAJ95296.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326507234|dbj|BAJ95694.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 264
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 46/119 (38%), Gaps = 43/119 (36%)
Query: 39 CYKCNNYGHFARECATESVT---------CYNCSGQGHVAKDC--------------TVK 75
C+KC GH AR+C+ CY C QGH+A+DC
Sbjct: 144 CFKCGEPGHMARDCSVNGAAGGGGGGGGGCYKCGEQGHIARDCFNGGAGGGGGGYGGGGG 203
Query: 76 SSIICYNCNSSGHFARNCPNDS--------------------SKRCYACHQAGHMAKEC 114
CYNC GH AR+CP S + CY C + GH+++EC
Sbjct: 204 GGGTCYNCGEPGHIARDCPTSSGFGGGGGGGRFGGGGGGGGGDRSCYNCGEPGHISREC 262
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 48/119 (40%), Gaps = 31/119 (26%)
Query: 59 CYNCSGQGHVAKDCTVKSSII--------CYNCNSSGHFARNCPNDSSKR---------- 100
C+ C GH+A+DC+V + CY C GH AR+C N +
Sbjct: 144 CFKCGEPGHMARDCSVNGAAGGGGGGGGGCYKCGEQGHIARDCFNGGAGGGGGGYGGGGG 203
Query: 101 ----CYACHQAGHMAKECPGQT---------AGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C + GH+A++CP + +CY CG GH+S +C
Sbjct: 204 GGGTCYNCGEPGHIARDCPTSSGFGGGGGGGRFGGGGGGGGGDRSCYNCGEPGHISREC 262
>gi|25148442|ref|NP_741323.1| Protein K08D12.3, isoform a [Caenorhabditis elegans]
gi|351064429|emb|CCD72801.1| Protein K08D12.3, isoform a [Caenorhabditis elegans]
Length = 151
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 60/149 (40%), Gaps = 35/149 (23%)
Query: 5 STIQCYNCFDFGHYQYSCPQ-KSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCS 63
S CY C GH +CP +S RG G CY C GHF+R+C
Sbjct: 2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRG 61
Query: 64 G------------QGHVAKDCTVKSSII-------------------CYNCNSSGHFARN 92
G +GH ++DC S CYNC SGH +R
Sbjct: 62 GGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRE 121
Query: 93 CPNDSS---KRCYACHQAGHMAKECPGQT 118
C S KRCY C + GH++++CP QT
Sbjct: 122 CTESGSAEEKRCYQCQETGHISRDCPSQT 150
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 59/149 (39%), Gaps = 49/149 (32%)
Query: 39 CYKCNNYGHFARECAT-----------ESVTCYNCSGQGHVAKDC-----------TVKS 76
CYKC GH +R C TCYNC GH ++DC
Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRGGGGG 65
Query: 77 SIICYNCNSSGHFARNCPN-------------------DSSKRCYACHQAGHMAKECPGQ 117
CYNC GH++R+CP+ ++CY C ++GH+++EC
Sbjct: 66 GGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISREC--- 122
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
T S E CY C GH+S DC
Sbjct: 123 TESGSAE-----EKRCYQCQETGHISRDC 146
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 25/115 (21%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNN--YGHFARECATESVT-------- 58
CYNC + GH+ CP+ S + G N GH++R+C +
Sbjct: 37 CYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGG 96
Query: 59 ------------CYNCSGQGHVAKDCTVKSSI---ICYNCNSSGHFARNCPNDSS 98
CYNC GH++++CT S CY C +GH +R+CP+ ++
Sbjct: 97 RGGEGRSFGGQKCYNCGRSGHISRECTESGSAEEKRCYQCQETGHISRDCPSQTN 151
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 97 SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
S + CY C Q GH+++ CP + S TCY C GH S DC
Sbjct: 2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGS-TCYNCQETGHFSRDC 50
>gi|224102939|ref|XP_002312862.1| predicted protein [Populus trichocarpa]
gi|222849270|gb|EEE86817.1| predicted protein [Populus trichocarpa]
Length = 640
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 67/159 (42%), Gaps = 36/159 (22%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT--ESVT-------C 59
CYNC + GH +CP + K C+ C + H A++C E +T C
Sbjct: 196 CYNCGEEGHMAVNCPTFT-------KKIKPCFVCGSLEHGAKQCTKVCEDITIQKLGQDC 248
Query: 60 YNCSGQGHVAKDC------TVKSSIICYNCNSSGHFARNCPNDSSK------RCYACHQA 107
+ C GH A+DC T +SS IC C SGH +C ND S +CY C
Sbjct: 249 FICKESGHRARDCPEKYKGTHQSSKICLKCGGSGHEMLSCMNDYSVDDLKEIQCYICKSF 308
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GH+ G + ++CY CG GH DC
Sbjct: 309 GHLCCFTSGDDGSR--------QVSCYRCGELGHTGLDC 339
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 41/97 (42%), Gaps = 15/97 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHF----ARECATESVTCYNCSG 64
C C GH SC S D D I CY C ++GH + + + V+CY C
Sbjct: 275 CLKCGGSGHEMLSCMNDYSVD---DLKEIQCYICKSFGHLCCFTSGDDGSRQVSCYRCGE 331
Query: 65 QGHVAKDC--------TVKSSIICYNCNSSGHFARNC 93
GH DC ++S CY C GHFAR C
Sbjct: 332 LGHTGLDCGRLHEEASMIESPSSCYRCGEGGHFAREC 368
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 58/147 (39%), Gaps = 26/147 (17%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE-------SVTCYN 61
C+ C + GH CP+K + K+ C KC GH C + + CY
Sbjct: 248 CFICKESGHRARDCPEKYKGTHQSSKI---CLKCGGSGHEMLSCMNDYSVDDLKEIQCYI 304
Query: 62 CSGQGHV-----AKDCTVKSSIICYNCNSSGHFARNCPN--------DSSKRCYACHQAG 108
C GH+ D + + + CY C GH +C +S CY C + G
Sbjct: 305 CKSFGHLCCFTSGDDGSRQ--VSCYRCGELGHTGLDCGRLHEEASMIESPSSCYRCGEGG 362
Query: 109 HMAKECPGQT-AGKSPEPVVDMSLTCY 134
H A+EC G+ ++ ++L +
Sbjct: 363 HFARECTSSARGGRRNRELLTLTLKAH 389
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 53/129 (41%), Gaps = 15/129 (11%)
Query: 28 ADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII--CYNCNS 85
A+A D V IV K + + CYNC +GH+A +C + I C+ C S
Sbjct: 165 ANAVEDSVNIVLRKLLRGPRYFDTLDSGWSNCYNCGEEGHMAVNCPTFTKKIKPCFVCGS 224
Query: 86 SGHFARNCPN--------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCG 137
H A+ C + C+ C ++GH A++CP + G S C CG
Sbjct: 225 LEHGAKQCTKVCEDITIQKLGQDCFICKESGHRARDCPEKYKG-----THQSSKICLKCG 279
Query: 138 HQGHLSYDC 146
GH C
Sbjct: 280 GSGHEMLSC 288
>gi|134140561|gb|ABO61035.1| gag protein [Simian immunodeficiency virus]
Length = 516
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKS 122
++S CYNC GH AR+CP S RC+ C + GH+A++C T GKS
Sbjct: 397 ENSTRCYNCGQFGHLARDCPKPKSTRCFKCGKEGHLARQCRTDT-GKS 443
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK 99
S CYNC GH+A+DC S C+ C GH AR C D+ K
Sbjct: 399 STRCYNCGQFGHLARDCPKPKSTRCFKCGKEGHLARQCRTDTGK 442
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 9/52 (17%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES 56
++ +CYNC FGH CP+ S C+KC GH AR+C T++
Sbjct: 398 NSTRCYNCGQFGHLARDCPKPKSTR---------CFKCGKEGHLARQCRTDT 440
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 11/52 (21%)
Query: 96 DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
++S RCY C Q GH+A++CP P+ S C+ CG +GHL+ C+
Sbjct: 397 ENSTRCYNCGQFGHLARDCP------KPK-----STRCFKCGKEGHLARQCR 437
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 39 CYKCNNYGHFARECAT-ESVTCYNCSGQGHVAKDC---TVKSSI 78
CY C +GH AR+C +S C+ C +GH+A+ C T KS++
Sbjct: 402 CYNCGQFGHLARDCPKPKSTRCFKCGKEGHLARQCRTDTGKSAV 445
>gi|321455555|gb|EFX66684.1| hypothetical protein DAPPUDRAFT_262733 [Daphnia pulex]
Length = 330
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 13/80 (16%)
Query: 80 CYNCNSSGHFARNCPNDSSKR-------------CYACHQAGHMAKECPGQTAGKSPEPV 126
C+NCN GH +R CP S++ CY C++ GHM++ECP +
Sbjct: 140 CFNCNEEGHLSRECPKPSTRGGGRGGGRGGSTATCYNCNEDGHMSRECPKPSTRGRGGGS 199
Query: 127 VDMSLTCYVCGHQGHLSYDC 146
TC+ C +GH+S DC
Sbjct: 200 GGGRNTCFKCNEEGHMSRDC 219
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 18/88 (20%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C+ CN GH +REC S S+ CYNCN GH +R CP S+
Sbjct: 140 CFNCNEEGHLSRECPKPSTRGG-------GRGGGRGGSTATCYNCNEDGHMSRECPKPST 192
Query: 99 -----------KRCYACHQAGHMAKECP 115
C+ C++ GHM+++CP
Sbjct: 193 RGRGGGSGGGRNTCFKCNEEGHMSRDCP 220
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 13/91 (14%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVG----IVCYKCNNYGHFARECATESVTCYNCSG 64
C+NC + GH CP+ S+ CY CN GH +REC S
Sbjct: 140 CFNCNEEGHLSRECPKPSTRGGGRGGGRGGSTATCYNCNEDGHMSRECPKPSTRGRGGG- 198
Query: 65 QGHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
+ C+ CN GH +R+CPN
Sbjct: 199 --------SGGGRNTCFKCNEEGHMSRDCPN 221
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGI--VCYKCNNYGHFAREC 52
ST CYNC + GH CP+ S+ G G C+KCN GH +R+C
Sbjct: 170 STATCYNCNEDGHMSRECPKPSTRGRGGGSGGGRNTCFKCNEEGHMSRDC 219
>gi|145348455|ref|XP_001418664.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578894|gb|ABO96957.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 153
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 57 VTCYNCSGQGHVAKDCTV---------KSSIICYNCNSSGHFARNCP----NDSSKRCYA 103
VTC+ C G GH +DC V + CYNC +S H AR+C N + +C+
Sbjct: 34 VTCFGCRGVGHTLRDCRVAKGGSATMRRGEKSCYNCGASDHAARDCAAAWTNYAHAKCFV 93
Query: 104 CHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C + GH++K CP ++ V C +C + HL DC
Sbjct: 94 CGETGHLSKSCP-----RNERGVYVNGGECKICKAKDHLVKDC 131
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 55/155 (35%), Gaps = 48/155 (30%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADA---RGDKVGIVCYKCNNYGHFARECATESVTCYN 61
S + C+ C GH C A RG+K +CYN
Sbjct: 32 SKVTCFGCRGVGHTLRDCRVAKGGSATMRRGEK-----------------------SCYN 68
Query: 62 CSGQGHVAKDCTVKSS----IICYNCNSSGHFARNCPND------SSKRCYACHQAGHMA 111
C H A+DC + C+ C +GH +++CP + + C C H+
Sbjct: 69 CGASDHAARDCAAAWTNYAHAKCFVCGETGHLSKSCPRNERGVYVNGGECKICKAKDHLV 128
Query: 112 KECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
K+CP + TC CG +GH + C
Sbjct: 129 KDCPHK------------GDTCIRCGERGHFAAGC 151
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 16/86 (18%)
Query: 75 KSSIICYNCNSSGHFARNCP---------NDSSKRCYACHQAGHMAKECPGQTAGKSPEP 125
+S + C+ C GH R+C K CY C + H A++C +
Sbjct: 31 RSKVTCFGCRGVGHTLRDCRVAKGGSATMRRGEKSCYNCGASDHAARDCAAAWTNYA--- 87
Query: 126 VVDMSLTCYVCGHQGHLSYDCKLVQK 151
C+VCG GHLS C ++
Sbjct: 88 ----HAKCFVCGETGHLSKSCPRNER 109
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKV-GIVCYKCNNYGHFARECATESVTCYNCSGQG 66
+C+ C + GH SCP+ + RG V G C C H ++C + TC C +G
Sbjct: 90 KCFVCGETGHLSKSCPR----NERGVYVNGGECKICKAKDHLVKDCPHKGDTCIRCGERG 145
Query: 67 HVAKDCT 73
H A C+
Sbjct: 146 HFAAGCS 152
>gi|380479291|emb|CCF43107.1| hypothetical protein CH063_12905 [Colletotrichum higginsianum]
Length = 221
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-TESVTCYNCSGQGH 67
C+NC GH + CP+ C C GH REC T ++TC C +GH
Sbjct: 47 CFNCGQSGHSKADCPEPRKP------FDGTCRGCGQEGHTRRECPDTPAMTCRVCGEEGH 100
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNC 93
+ +DC K +C NC+ GH +C
Sbjct: 101 IRRDCPQKPPDVCRNCHEEGHDVVDC 126
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Query: 29 DARGDKVGIVCYKCNNYGHFARECATESV----TCYNCSGQGHVAKDCTVKSSIICYNCN 84
D GD C+ C GH +C TC C +GH ++C ++ C C
Sbjct: 39 DGNGDDR--ACFNCGQSGHSKADCPEPRKPFDGTCRGCGQEGHTRRECPDTPAMTCRVCG 96
Query: 85 SSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
GH R+CP C CH+ GH +C
Sbjct: 97 EEGHIRRDCPQKPPDVCRNCHEEGHDVVDC 126
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 14/96 (14%)
Query: 59 CYNCSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
C+NC GH DC C C GH R CP+ + C C + GH+ ++CP
Sbjct: 47 CFNCGQSGHSKADCPEPRKPFDGTCRGCGQEGHTRRECPDTPAMTCRVCGEEGHIRRDCP 106
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
K P+ C C +GH DCK +K
Sbjct: 107 Q----KPPD-------VCRNCHEEGHDVVDCKAPRK 131
>gi|326492548|dbj|BAK02057.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 54/130 (41%), Gaps = 20/130 (15%)
Query: 32 GDKVGIVCYKCNNYGHFARECATESV-----TCYNCSGQGHVAKDCTVKSS----IICYN 82
G + G C+ C H A+ C +S C C +GH K+C K CYN
Sbjct: 65 GMRPGEQCFICKGTDHAAKNCPEKSYWDKNKICLLCRERGHSMKNCPDKGDGDLKKFCYN 124
Query: 83 CNSSGHFARNCPNDSSK------RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVC 136
C SGH CP C+ C Q GH++K+CP T G P+ C +C
Sbjct: 125 CGESGHSLSKCPKPIENGGTNFASCFVCKQQGHLSKDCPESTHGIYPK-----GGCCKIC 179
Query: 137 GHQGHLSYDC 146
G HL+ C
Sbjct: 180 GEVTHLARHC 189
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 42/100 (42%), Gaps = 18/100 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-------ATESVTCYN 61
C C + GH +CP K D + CY C GH +C T +C+
Sbjct: 97 CLLCRERGHSMKNCPDKGDGDLK-----KFCYNCGESGHSLSKCPKPIENGGTNFASCFV 151
Query: 62 CSGQGHVAKDCTVKSSII------CYNCNSSGHFARNCPN 95
C QGH++KDC + I C C H AR+CPN
Sbjct: 152 CKQQGHLSKDCPESTHGIYPKGGCCKICGEVTHLARHCPN 191
>gi|253771018|gb|ACT35657.1| vasa-like protein [Haliotis asinina]
Length = 763
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 10/63 (15%)
Query: 80 CYNCNSSGHFARNCPN-DS------SKRCYACHQAGHMAKECP-GQTAGKS--PEPVVDM 129
C+ C GHF+R CPN DS S+ C+ C + GHM++ECP ++GK P P +
Sbjct: 209 CFKCGEEGHFSRECPNADSSGGRGGSRACFKCGEEGHMSRECPNADSSGKDDRPPPYIPP 268
Query: 130 SLT 132
+LT
Sbjct: 269 ALT 271
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 14/63 (22%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN-DS 97
C+KC GHF+REC + G+G S C+ C GH +R CPN DS
Sbjct: 209 CFKCGEEGHFSRECPNAD----SSGGRG---------GSRACFKCGEEGHMSRECPNADS 255
Query: 98 SKR 100
S +
Sbjct: 256 SGK 258
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC 52
C+ C + GH+ CP S+ RG C+KC GH +REC
Sbjct: 209 CFKCGEEGHFSRECPNADSSGGRGGSRA--CFKCGEEGHMSREC 250
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 8/48 (16%)
Query: 101 CYACHQAGHMAKECPG--QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C+ C + GH ++ECP + G+ S C+ CG +GH+S +C
Sbjct: 209 CFKCGEEGHFSRECPNADSSGGRGG------SRACFKCGEEGHMSREC 250
>gi|22037884|gb|AAM90221.1| gag protein [Simian immunodeficiency virus]
Length = 510
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGK 121
CYNC GH AR+CP ++C+ C +AGH+A++C T K
Sbjct: 399 CYNCGKFGHIARDCPKPKERKCFKCGKAGHLARQCKTGTPAK 440
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
CYNC GH+A+DC C+ C +GH AR C
Sbjct: 399 CYNCGKFGHIARDCPKPKERKCFKCGKAGHLARQC 433
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 9/49 (18%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT 54
T +CYNC FGH CP+ C+KC GH AR+C T
Sbjct: 396 TPKCYNCGKFGHIARDCPKPKERK---------CFKCGKAGHLARQCKT 435
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ +CY C + GH+A++CP K C+ CG GHL+ CK
Sbjct: 396 TPKCYNCGKFGHIARDCPKPKERK-----------CFKCGKAGHLARQCK 434
>gi|357450377|ref|XP_003595465.1| hypothetical protein MTR_2g048010 [Medicago truncatula]
gi|355484513|gb|AES65716.1| hypothetical protein MTR_2g048010 [Medicago truncatula]
Length = 468
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 37 IVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND 96
IVCYKC GH + C + C+ C +GH +C + IICYNCN S CP
Sbjct: 124 IVCYKCGEKGHKSNVCGRDDRKCFRCGQKGHSLAECK-RGDIICYNCNGSSQ----CPEP 178
Query: 97 SSKR 100
R
Sbjct: 179 KKTR 182
Score = 39.3 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 78 IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
I+CY C GH + C D ++C+ C Q GH EC
Sbjct: 124 IVCYKCGEKGHKSNVCGRDD-RKCFRCGQKGHSLAEC 159
>gi|166026124|gb|ABY78372.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ +I C+NC GH ARNC K C+ C Q GH KECP + A
Sbjct: 388 RKTIKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKECPTRQA 432
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMA 111
+++ C+NC +GH+A++C C+ C GH + CP + + + H+
Sbjct: 389 KTIKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKECPTRQANFLGKIWPSHKGR--- 445
Query: 112 KECPGQTAGKSPEP 125
PG PEP
Sbjct: 446 ---PGNFLQNRPEP 456
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 13/51 (25%)
Query: 6 TIQCYNCFDFGHYQYSC--PQKSSADARGDKVGIVCYKCNNYGHFARECAT 54
TI+C+NC GH +C P+K C+KC GH +EC T
Sbjct: 390 TIKCFNCGKEGHLARNCRAPRKKG-----------CWKCGQEGHQMKECPT 429
>gi|67423408|dbj|BAD99523.1| VASA RNA helicase [Artemia franciscana]
Length = 726
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 15/82 (18%)
Query: 80 CYNCNSSGHFARNCPN-------------DSSKRCYACHQAGHMAKEC--PGQTAGKSPE 124
C+NCN GH +R C S+ CY C+Q GHM++EC P G
Sbjct: 80 CFNCNQEGHMSRECTQPRAERGGGRGGGRGGSRACYNCNQEGHMSQECTEPRAERGGGRG 139
Query: 125 PVVDMSLTCYVCGHQGHLSYDC 146
S C+ C +GH + DC
Sbjct: 140 GGRGGSRACFNCQQEGHRASDC 161
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 26/82 (31%)
Query: 59 CYNCSGQGHVAKDCT-------------VKSSIICYNCNSSGHFARNCPN---------- 95
C+NC+ +GH++++CT S CYNCN GH ++ C
Sbjct: 80 CFNCNQEGHMSRECTQPRAERGGGRGGGRGGSRACYNCNQEGHMSQECTEPRAERGGGRG 139
Query: 96 ---DSSKRCYACHQAGHMAKEC 114
S+ C+ C Q GH A +C
Sbjct: 140 GGRGGSRACFNCQQEGHRASDC 161
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 27/82 (32%)
Query: 39 CYKCNNYGHFARECA--------------TESVTCYNCSGQGHVAKDCT----------- 73
C+ CN GH +REC S CYNC+ +GH++++CT
Sbjct: 80 CFNCNQEGHMSRECTQPRAERGGGRGGGRGGSRACYNCNQEGHMSQECTEPRAERGGGRG 139
Query: 74 --VKSSIICYNCNSSGHFARNC 93
S C+NC GH A +C
Sbjct: 140 GGRGGSRACFNCQQEGHRASDC 161
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 34/84 (40%), Gaps = 18/84 (21%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGI----VCYKCNNYGHFARECA---------- 53
+C+NC GH C Q + G G CY CN GH ++EC
Sbjct: 79 KCFNCNQEGHMSRECTQPRAERGGGRGGGRGGSRACYNCNQEGHMSQECTEPRAERGGGR 138
Query: 54 ----TESVTCYNCSGQGHVAKDCT 73
S C+NC +GH A DCT
Sbjct: 139 GGGRGGSRACFNCQQEGHRASDCT 162
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 100 RCYACHQAGHMAKEC--PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+C+ C+Q GHM++EC P G S CY C +GH+S +C
Sbjct: 79 KCFNCNQEGHMSRECTQPRAERGGGRGGGRGGSRACYNCNQEGHMSQEC 127
>gi|363543235|ref|NP_001241832.1| uncharacterized protein LOC100857032 [Zea mays]
gi|224033945|gb|ACN36048.1| unknown [Zea mays]
gi|413926630|gb|AFW66562.1| hypothetical protein ZEAMMB73_047398 [Zea mays]
Length = 249
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 49/125 (39%), Gaps = 47/125 (37%)
Query: 38 VCYKCNNYGHFARECATESVT----------------------CYNCSGQGHVAKDCT-- 73
CYKC GH AR+C + C+ C GH+A+DC+
Sbjct: 124 ACYKCGEPGHMARDCPSADGGGGYGGGGYGGGGYGGGGGGGGGCFKCGEPGHMARDCSSG 183
Query: 74 --------VKSSIICYNCNSSGHFARNCPNDS---------------SKRCYACHQAGHM 110
CYNC +GH AR+CP+ + CY C +AGH+
Sbjct: 184 GGGYGGGGGGGGGGCYNCGQAGHMARDCPSGGGGGGGRFGGGGGGGGDRSCYNCGEAGHI 243
Query: 111 AKECP 115
A++CP
Sbjct: 244 ARDCP 248
>gi|341865535|tpg|DAA34907.1| TPA_exp: DEAD-box RNA helicase Vasa [Pleurobrachia pileus]
Length = 530
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 83 CNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPV 126
CN GHFAR CP ++C+ C ++GH +CP + P PV
Sbjct: 3 CNEEGHFARECPQKGEEKCFRCQESGHRVADCPQEADPDRPAPV 46
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 62 CSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS 97
C+ +GH A++C K C+ C SGH +CP ++
Sbjct: 3 CNEEGHFARECPQKGEEKCFRCQESGHRVADCPQEA 38
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 42 CNNYGHFARECATE-SVTCYNCSGQGHVAKDC 72
CN GHFAREC + C+ C GH DC
Sbjct: 3 CNEEGHFARECPQKGEEKCFRCQESGHRVADC 34
>gi|427787097|gb|JAA59000.1| Putative e3 ubiquitin ligase [Rhipicephalus pulchellus]
Length = 554
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 59 CYNCSGQGHVAKDC------TVKSSIICYNCNSSGHFARNCPNDSSK-------RCYACH 105
C+ C GH DC + + IC+ C S+ HF+ C +SK +C+ C
Sbjct: 410 CFKCRQPGHRVSDCPQMLQDSSEPIGICFKCGSTEHFSSACTVQTSKDNEFPYAKCFICK 469
Query: 106 QAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
Q GH++++CP G P+ C CG H +C ++K+
Sbjct: 470 QQGHLSRKCPRNDKGVYPK-----GGHCNFCGAIDHFKKECPEMEKN 511
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 20/105 (19%)
Query: 38 VCYKCNNYGHFAREC------ATESV-TCYNCSGQGHVAKDCTVKSS-------IICYNC 83
+C+KC GH +C ++E + C+ C H + CTV++S C+ C
Sbjct: 409 LCFKCRQPGHRVSDCPQMLQDSSEPIGICFKCGSTEHFSSACTVQTSKDNEFPYAKCFIC 468
Query: 84 NSSGHFARNCPNDSS------KRCYACHQAGHMAKECPGQTAGKS 122
GH +R CP + C C H KECP KS
Sbjct: 469 KQQGHLSRKCPRNDKGVYPKGGHCNFCGAIDHFKKECPEMEKNKS 513
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 79 ICYNCNSSGHFARNCP---NDSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLT 132
+C+ C GH +CP DSS+ C+ C H + C QT+ + P
Sbjct: 409 LCFKCRQPGHRVSDCPQMLQDSSEPIGICFKCGSTEHFSSACTVQTSKDNEFPYA----K 464
Query: 133 CYVCGHQGHLSYDC 146
C++C QGHLS C
Sbjct: 465 CFICKQQGHLSRKC 478
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
+K C+ C Q GH +CP Q S EP+ C+ CG H S C +
Sbjct: 407 AKLCFKCRQPGHRVSDCP-QMLQDSSEPIG----ICFKCGSTEHFSSACTV 452
>gi|118485064|gb|ABK94395.1| unknown [Populus trichocarpa]
Length = 278
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 58/139 (41%), Gaps = 21/139 (15%)
Query: 24 QKSSADARGDKVGIVCYKCNNYGHFARECA-----TESVTCYNCSGQGHVAKDCTVKSS- 77
+K G K G C+ C H A+ C ++ C C +GH K C K+
Sbjct: 63 RKQPLRVPGMKPGDSCFICKAKDHIAKLCPQKDEWEKNKICLLCRHRGHSLKRCPKKNDE 122
Query: 78 ----IICYNCNSSGHFARNCPNDSSK------RCYACHQAGHMAKECPGQTAGKSPEPVV 127
+CYNC +GH CP C+ C++ GH++K+CP G P+
Sbjct: 123 TMDQKLCYNCGETGHSLSQCPQPREDGGTKFANCFICNERGHLSKDCPKNNRGIYPK--- 179
Query: 128 DMSLTCYVCGHQGHLSYDC 146
C +CG HL+ DC
Sbjct: 180 --GGCCKLCGGVTHLARDC 196
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 18/118 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-------ATESVTCYN 61
C C GH CP+K+ D D+ +CY C GH +C T+ C+
Sbjct: 103 CLLCRHRGHSLKRCPKKN--DETMDQK--LCYNCGETGHSLSQCPQPREDGGTKFANCFI 158
Query: 62 CSGQGHVAKDCTVKSSII------CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKE 113
C+ +GH++KDC + I C C H AR+CP D KR A G + +E
Sbjct: 159 CNERGHLSKDCPKNNRGIYPKGGCCKLCGGVTHLARDCP-DKGKRGDAAFGRGAIGRE 215
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 48/127 (37%), Gaps = 23/127 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA------TESVTCYNC 62
C+ C H CPQK + +C C + GH + C + CYNC
Sbjct: 78 CFICKAKDHIAKLCPQKDEWEK-----NKICLLCRHRGHSLKRCPKKNDETMDQKLCYNC 132
Query: 63 SGQGHVAKDCTVKSS------IICYNCNSSGHFARNCPNDSSKR------CYACHQAGHM 110
GH C C+ CN GH +++CP ++ C C H+
Sbjct: 133 GETGHSLSQCPQPREDGGTKFANCFICNERGHLSKDCPKNNRGIYPKGGCCKLCGGVTHL 192
Query: 111 AKECPGQ 117
A++CP +
Sbjct: 193 ARDCPDK 199
>gi|356534137|ref|XP_003535614.1| PREDICTED: uncharacterized protein LOC100804471 [Glycine max]
Length = 1241
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 21/131 (16%)
Query: 32 GDKVGIVCYKCNNYGHFARECATESV-----TCYNCSGQGHVAKDCT-----VKSSIICY 81
G K G C+ C H A+ C ++ C C +GH AK+C K + CY
Sbjct: 65 GMKPGESCFICKAMDHIAKLCPEKAEWEKNKICLRCRRRGHRAKNCPEVLDGAKDAKYCY 124
Query: 82 NCNSSGHFARNCPNDSSK------RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
NC +GH C + + C+ C+Q GH++K CP T G P+ C +
Sbjct: 125 NCGENGHALTQCLHPLQEGGTKFAECFVCNQRGHLSKNCPQNTHGIYPK-----GGCCKI 179
Query: 136 CGHQGHLSYDC 146
CG HL+ DC
Sbjct: 180 CGGVTHLAKDC 190
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 55/132 (41%), Gaps = 25/132 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC------ATESVTCYNC 62
C+ C H CP+K+ + +C +C GH A+ C A ++ CYNC
Sbjct: 72 CFICKAMDHIAKLCPEKAEWEKNK-----ICLRCRRRGHRAKNCPEVLDGAKDAKYCYNC 126
Query: 63 SGQGHVAKDCTVKSS------IICYNCNSSGHFARNCPNDSSKR------CYACHQAGHM 110
GH C C+ CN GH ++NCP ++ C C H+
Sbjct: 127 GENGHALTQCLHPLQEGGTKFAECFVCNQRGHLSKNCPQNTHGIYPKGGCCKICGGVTHL 186
Query: 111 AKECPGQTAGKS 122
AK+CP + GKS
Sbjct: 187 AKDCPDK--GKS 196
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
Query: 63 SGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN----DSSKRCYACHQAGHMAKECPGQT 118
S + H+ + +K C+ C + H A+ CP + +K C C + GH AK CP
Sbjct: 55 SRKRHLLRVPGMKPGESCFICKAMDHIAKLCPEKAEWEKNKICLRCRRRGHRAKNCPEVL 114
Query: 119 AGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
G + CY CG GH C
Sbjct: 115 DG------AKDAKYCYNCGENGHALTQC 136
>gi|406607109|emb|CCH41533.1| Gag-Pol polyprotein [Wickerhamomyces ciferrii]
Length = 301
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND---SSKRCYACHQAGHMAKEC 114
TCY C GH A +C+ +CYNC + GH + CPND SK+CY C GH+ EC
Sbjct: 62 TCYKCGSLGHFANECS-SCERLCYNCKTPGHESSKCPNDRNSESKQCYFCRDVGHIQSEC 120
Query: 115 P 115
P
Sbjct: 121 P 121
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
CY C S GHFA C + + CY C GH + +CP +S + CY C
Sbjct: 63 CYKCGSLGHFANEC-SSCERLCYNCKTPGHESSKCPNDRNSESKQ--------CYFCRDV 113
Query: 140 GHLSYDCKLVQK 151
GH+ +C Q+
Sbjct: 114 GHIQSECPKYQE 125
>gi|198401785|gb|ACH87542.1| Air1 domain containing protein [Platynereis dumerilii]
Length = 489
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 20/109 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE---SVTCYNCSGQ 65
C+ C GH CP + + I C++C GH A +C++ S+ C+ C G+
Sbjct: 346 CFECGGAGHLAPHCPTR-------HQRSIHCFECEGVGHPAPQCSSRRHVSIICHQCRGR 398
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
GH+AK+C ++C + HF+ P + R Y C GH+A+ C
Sbjct: 399 GHIAKNC-------AFSCGPASHFS---PRRNITRGYECWNYGHIARNC 437
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 16/99 (16%)
Query: 58 TCYNCSGQGHVAKDCTVK--SSIICYNCNSSGHFARNCPNDSSKR-----CYACHQAGHM 110
TC+ C G GH+A C + SI C+ C GH A C SS+R C+ C GH+
Sbjct: 345 TCFECGGAGHLAPHCPTRHQRSIHCFECEGVGHPAPQC---SSRRHVSIICHQCRGRGHI 401
Query: 111 AKECP---GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
AK C G + SP + Y C + GH++ +C
Sbjct: 402 AKNCAFSCGPASHFSPRRNITRG---YECWNYGHIARNC 437
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 19/91 (20%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-----------T 54
+I C+ C GH C + V I+C++C GH A+ CA
Sbjct: 366 SIHCFECEGVGHPAPQCSSRR-------HVSIICHQCRGRGHIAKNCAFSCGPASHFSPR 418
Query: 55 ESVT-CYNCSGQGHVAKDCTVKSSIICYNCN 84
++T Y C GH+A++C +S I N
Sbjct: 419 RNITRGYECWNYGHIARNCIDSTSSIVRASN 449
>gi|224132214|ref|XP_002328213.1| predicted protein [Populus trichocarpa]
gi|222837728|gb|EEE76093.1| predicted protein [Populus trichocarpa]
Length = 683
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 28/155 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC + GH +CP K C+ C + H A++C ++ C+ C GH
Sbjct: 198 CYNCGEEGHMAVNCPTPM-------KKIKPCFVCGSLEHGAKQC-SKGRDCFICKKSGHR 249
Query: 69 AKDC------TVKSSIICYNCNSSGHFARNC-----PNDSSK-RCYACHQAGHMAKECPG 116
AK+C T +SS IC NC SGH +C PND + +CY C GH+ G
Sbjct: 250 AKNCPDKYNATPQSSKICLNCGESGHEMFSCKKDYSPNDLKEIQCYICKSFGHLCCVTSG 309
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
+ + ++CY CG GH +C + +
Sbjct: 310 DDSLR--------QVSCYRCGELGHSGLECGRLNE 336
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 15/97 (15%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHF----ARECATESVTCYNCSG 64
C NC + GH +SC + S + D I CY C ++GH + + + V+CY C
Sbjct: 267 CLNCGESGHEMFSCKKDYSPN---DLKEIQCYICKSFGHLCCVTSGDDSLRQVSCYRCGE 323
Query: 65 QGHVAKDC--------TVKSSIICYNCNSSGHFARNC 93
GH +C +S +CY C GHFAR C
Sbjct: 324 LGHSGLECGRLNEEATMAESPSLCYRCGEGGHFAREC 360
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 58 TCYNCSGQGHVAKDCTVKSSII--CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
TCYNC +GH+A +C I C+ C S H A+ C + C+ C ++GH AK CP
Sbjct: 197 TCYNCGEEGHMAVNCPTPMKKIKPCFVCGSLEHGAKQC--SKGRDCFICKKSGHRAKNCP 254
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ S C CG GH + CK
Sbjct: 255 DKY-----NATPQSSKICLNCGESGHEMFSCK 281
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC 52
S + CY C + GH C + + +A + +CY+C GHFAREC
Sbjct: 312 SLRQVSCYRCGELGHSGLEC-GRLNEEATMAESPSLCYRCGEGGHFAREC 360
>gi|392577585|gb|EIW70714.1| hypothetical protein TREMEDRAFT_61226 [Tremella mesenterica DSM
1558]
Length = 661
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 62/161 (38%), Gaps = 31/161 (19%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCP--------QKSSADARGDKVGIVCYKCNNYGHFARECA 53
S+T + C NC GH +CP ++ + R +G+VC+ C GH EC
Sbjct: 239 SATRSKICQNCKRPGHRMNACPHTICTLCGKEDDHERRFCPIGLVCFNCGQRGHRISECE 298
Query: 54 TESVT------CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQA 107
S C C + H+A + H +R CP+ Y +A
Sbjct: 299 EPSSKTSRRHGCAKCGSRDHMA---------------AVRHLSRGCPSVWRVYSYLSKKA 343
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLT--CYVCGHQGHLSYDC 146
++E + G + E V + CY C QGHL DC
Sbjct: 344 REASREKKARVQGWAKEAVGGDAYEEWCYNCAQQGHLGDDC 384
>gi|125549296|gb|EAY95118.1| hypothetical protein OsI_16935 [Oryza sativa Indica Group]
Length = 403
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 57/130 (43%), Gaps = 20/130 (15%)
Query: 32 GDKVGIVCYKCNNYGHFARECATESV-----TCYNCSGQGHVAKDCTVKSS----IICYN 82
G + G C+ C H A+ C +S+ C C +GH K+C K+ CYN
Sbjct: 65 GMRPGERCFICKATDHVAKVCPEKSLWEKNKICLLCRQRGHSLKNCPDKNDENLKKFCYN 124
Query: 83 CNSSGHFARNCP----NDSSK--RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVC 136
C SGH CP N +K C+ C Q GH++K CP G P+ C +C
Sbjct: 125 CGESGHSLSKCPKPIENGGTKFASCFVCKQQGHLSKNCPENKHGIYPK-----GGCCKIC 179
Query: 137 GHQGHLSYDC 146
G HL+ C
Sbjct: 180 GEVTHLAKHC 189
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 48/127 (37%), Gaps = 22/127 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT-----CYNC 62
+C+ C H CP+KS + +C C GH + C ++ CYNC
Sbjct: 71 RCFICKATDHVAKVCPEKSLWEK-----NKICLLCRQRGHSLKNCPDKNDENLKKFCYNC 125
Query: 63 SGQGHVAKDCTVKSS------IICYNCNSSGHFARNCPNDSSKR------CYACHQAGHM 110
GH C C+ C GH ++NCP + C C + H+
Sbjct: 126 GESGHSLSKCPKPIENGGTKFASCFVCKQQGHLSKNCPENKHGIYPKGGCCKICGEVTHL 185
Query: 111 AKECPGQ 117
AK CP +
Sbjct: 186 AKHCPNR 192
>gi|308463757|ref|XP_003094150.1| hypothetical protein CRE_13706 [Caenorhabditis remanei]
gi|308248141|gb|EFO92093.1| hypothetical protein CRE_13706 [Caenorhabditis remanei]
Length = 158
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 62/153 (40%), Gaps = 42/153 (27%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT---------- 54
S CY C GH +CPQ+ R G CY C GHF+R+C
Sbjct: 2 SDQSCYKCQQPGHISRNCPQREQDGGRRGGGGSTCYNCQETGHFSRDCPKGGSGGGQRDR 61
Query: 55 ------ESVTCYNCSGQGHVAKDCTVKSS-----------------------IICYNCNS 85
+CYNC G+GH ++DC S CYNC
Sbjct: 62 NSGGGGGGGSCYNCGGRGHYSRDCPSARSEEGSGSRGYGGGGRGGGSRSFGGQKCYNCGR 121
Query: 86 SGHFARNCPNDSS---KRCYACHQAGHMAKECP 115
+GH +R C S KRCY C + GH++++CP
Sbjct: 122 NGHISRECTESGSAEEKRCYNCQETGHISRDCP 154
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 50/128 (39%), Gaps = 42/128 (32%)
Query: 58 TCYNCSGQGHVAKDCTVKSS---------IICYNCNSSGHFARNCPNDSS---------- 98
+CY C GH++++C + CYNC +GHF+R+CP S
Sbjct: 5 SCYKCQQPGHISRNCPQREQDGGRRGGGGSTCYNCQETGHFSRDCPKGGSGGGQRDRNSG 64
Query: 99 -----KRCYACHQAGHMAKECPGQTAGKSPE---------------PVVDMSLTCYVCGH 138
CY C GH +++CP + +S E CY CG
Sbjct: 65 GGGGGGSCYNCGGRGHYSRDCP---SARSEEGSGSRGYGGGGRGGGSRSFGGQKCYNCGR 121
Query: 139 QGHLSYDC 146
GH+S +C
Sbjct: 122 NGHISREC 129
>gi|38491891|gb|AAR22259.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A E+++ + +G + + I C+NC GH ARNC
Sbjct: 348 CQGVGGPGHKARVLA-EAMSQVHQTGIMMQRGNFKGQKRIKCFNCGKEGHLARNCRAPRR 406
Query: 99 KRCYACHQAGHMAKECPGQ 117
K C+ C + GH KECPG+
Sbjct: 407 KGCWKCGKEGHQMKECPGE 425
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
I C+ C GH AR C A C+ C +GH K+C
Sbjct: 386 IKCFNCGKEGHLARNCRAPRRKGCWKCGKEGHQMKEC 422
>gi|222629337|gb|EEE61469.1| hypothetical protein OsJ_15732 [Oryza sativa Japonica Group]
Length = 403
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 57/130 (43%), Gaps = 20/130 (15%)
Query: 32 GDKVGIVCYKCNNYGHFARECATESV-----TCYNCSGQGHVAKDCTVKSS----IICYN 82
G + G C+ C H A+ C +S+ C C +GH K+C K+ CYN
Sbjct: 65 GMRPGERCFICKAADHVAKVCPEKSLWEKNKICLLCRQRGHSLKNCPDKNDENLKKFCYN 124
Query: 83 CNSSGHFARNCP----NDSSK--RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVC 136
C SGH CP N +K C+ C Q GH++K CP G P+ C +C
Sbjct: 125 CGESGHSLSKCPKPIENGGTKFASCFVCKQQGHLSKNCPENKHGIYPK-----GGCCKIC 179
Query: 137 GHQGHLSYDC 146
G HL+ C
Sbjct: 180 GEVTHLAKHC 189
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 48/127 (37%), Gaps = 22/127 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT-----CYNC 62
+C+ C H CP+KS + +C C GH + C ++ CYNC
Sbjct: 71 RCFICKAADHVAKVCPEKSLWEK-----NKICLLCRQRGHSLKNCPDKNDENLKKFCYNC 125
Query: 63 SGQGHVAKDCTVKSS------IICYNCNSSGHFARNCPNDSSKR------CYACHQAGHM 110
GH C C+ C GH ++NCP + C C + H+
Sbjct: 126 GESGHSLSKCPKPIENGGTKFASCFVCKQQGHLSKNCPENKHGIYPKGGCCKICGEVTHL 185
Query: 111 AKECPGQ 117
AK CP +
Sbjct: 186 AKHCPNR 192
>gi|443920846|gb|ELU40678.1| zf-CCHC domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 167
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 47/127 (37%), Gaps = 37/127 (29%)
Query: 9 CYNCFDFGHYQYSCPQKSSAD---------------ARGDKVGIVCYKCNNYGHFAREC- 52
CY C + GH CPQ + D G CYKC GH AR C
Sbjct: 39 CYKCNETGHISRECPQNTQNDNTGGGYSGGGYGGGYGGGGGSNTECYKCGKVGHIARACP 98
Query: 53 ------------ATESVTCYNC---------SGQGHVAKDCTVKSSIICYNCNSSGHFAR 91
AT V C + GH++KDC CYNC S GH +R
Sbjct: 99 EATSGGYGGGSGATPVVALVTCRVTAYRDLSATIGHISKDCPQPQRRACYNCGSEGHISR 158
Query: 92 NCPNDSS 98
+CPN +
Sbjct: 159 DCPNPGT 165
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 37/123 (30%)
Query: 65 QGHVAKDCTVKSSI-ICYNCNSSGHFARNCPNDS------------------------SK 99
+GHV++DCT+++ CY CN +GH +R CP ++ +
Sbjct: 23 EGHVSRDCTMEAKPKTCYKCNETGHISRECPQNTQNDNTGGGYSGGGYGGGYGGGGGSNT 82
Query: 100 RCYACHQAGHMAKECPGQT-----AGKSPEPVVDMSLTCYVCGHQ------GHLSYDCKL 148
CY C + GH+A+ CP T G PVV + +TC V ++ GH+S DC
Sbjct: 83 ECYKCGKVGHIARACPEATSGGYGGGSGATPVVAL-VTCRVTAYRDLSATIGHISKDCPQ 141
Query: 149 VQK 151
Q+
Sbjct: 142 PQR 144
>gi|124299478|gb|ABN04674.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 469
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ + C+NC GH ARNC K C+ C Q GH K+CPG+ A
Sbjct: 356 RKPVKCFNCGKDGHIARNCRAPRKKGCWKCGQEGHXMKDCPGRQA 400
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKE 113
V C+NC GH+A++C C+ C GH ++CP + + + H+
Sbjct: 359 VKCFNCGKDGHIARNCRAPRKKGCWKCGQEGHXMKDCPGRQANFLGKIWPSHKGR----- 413
Query: 114 CPGQTAGKSPEP 125
PG PEP
Sbjct: 414 -PGNFLQSRPEP 424
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
R + + C+ C GH AR C A C+ C +GH KDC
Sbjct: 353 RNQRKPVKCFNCGKDGHIARNCRAPRKKGCWKCGQEGHXMKDC 395
>gi|449681909|ref|XP_002167841.2| PREDICTED: uncharacterized protein LOC100198974, partial [Hydra
magnipapillata]
Length = 706
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 52/108 (48%), Gaps = 18/108 (16%)
Query: 44 NYGHFARECATES---VTCYNCSGQGHVAKDCTVKSSI-ICYNCNSSGHFAR-NCPNDSS 98
N+ H +R T S + CYNC +GH+ +DC+ I CY C G+ AR C ND
Sbjct: 58 NFKHVSRYYVTSSLPNIFCYNCDERGHLMRDCSKPKKIPTCYLC--GGNHARHKCINDL- 114
Query: 99 KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C GH++K+C EP + TC C QGH +C
Sbjct: 115 --CYNCMNPGHISKDC--------KEPRLSYQQTCLRCNFQGHTKKNC 152
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 26/149 (17%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAR-ECATESVTCY 60
SS I CYNC + GH C ++ K+ CY C G+ AR +C + CY
Sbjct: 69 SSLPNIFCYNCDERGHLMRDC-------SKPKKIP-TCYLCG--GNHARHKCIND--LCY 116
Query: 61 NCSGQGHVAKDCT---VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
NC GH++KDC + C CN GH +NCP + ++ + + G + K +
Sbjct: 117 NCMNPGHISKDCKEPRLSYQQTCLRCNFQGHTKKNCP-EIWRQYHLTVEDGKIVKPNKYK 175
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
T + + CY C + H DC
Sbjct: 176 T---------NKTRYCYNCASKKHFGEDC 195
>gi|343416463|emb|CCD20360.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 416
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 51/117 (43%), Gaps = 20/117 (17%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV--T 58
M ++ +C+NC FGH C K VC+ C GH + EC + +
Sbjct: 2 MPMSAQTRCFNCGHFGHSSQLCASKP-----------VCFHCFMPGHTSTECPRKDMGRL 50
Query: 59 CYNCSGQGH-VAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
CY C GH +AK S C+ CN +GH CP C CHQ GHMA C
Sbjct: 51 CYRCKEPGHDMAKSL---QSPQCHMCNQTGHLVVKCPE---VLCNWCHQKGHMASAC 101
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 20/112 (17%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKS-SIICYNCNSSGH-FARNCPND 96
C+ C ++GH ++ CA++ V C++C GH + +C K +CY C GH A++
Sbjct: 10 CFNCGHFGHSSQLCASKPV-CFHCFMPGHTSTECPRKDMGRLCYRCKEPGHDMAKSL--- 65
Query: 97 SSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
S +C+ C+Q GH+ +CP + C C +GH++ CK+
Sbjct: 66 QSPQCHMCNQTGHLVVKCP--------------EVLCNWCHQKGHMASACKM 103
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 18/93 (19%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN-DSSKRCYACHQAGH-MAKECPG 116
C+NC GH ++ C K +C++C GH + CP D + CY C + GH MAK
Sbjct: 10 CFNCGHFGHSSQLCASKP--VCFHCFMPGHTSTECPRKDMGRLCYRCKEPGHDMAKSL-- 65
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
+SP+ C++C GHL C V
Sbjct: 66 ----QSPQ--------CHMCNQTGHLVVKCPEV 86
>gi|223973883|gb|ACN31129.1| unknown [Zea mays]
Length = 281
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 49/125 (39%), Gaps = 47/125 (37%)
Query: 38 VCYKCNNYGHFARECATESVT----------------------CYNCSGQGHVAKDCT-- 73
CYKC GH AR+C + C+ C GH+A+DC+
Sbjct: 156 ACYKCGEPGHMARDCPSADGGGGYGGGGYGGGGYGGGGGGGGGCFKCGEPGHMARDCSSG 215
Query: 74 --------VKSSIICYNCNSSGHFARNCPNDS---------------SKRCYACHQAGHM 110
CYNC +GH AR+CP+ + CY C +AGH+
Sbjct: 216 GGGYGGGGGGGGGGCYNCGQAGHMARDCPSGGGGGGGRFGGGGGGGGDRSCYNCGEAGHI 275
Query: 111 AKECP 115
A++CP
Sbjct: 276 ARDCP 280
>gi|291226861|ref|XP_002733408.1| PREDICTED: VASA RNA helicase-like [Saccoglossus kowalevskii]
Length = 171
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 48/129 (37%), Gaps = 35/129 (27%)
Query: 53 ATESVTCYNCSGQGHVAKDCTVKSSII---------------------------CYNCNS 85
+ CYNC QGH+++DC CYNC
Sbjct: 4 GRRDIECYNCGRQGHISRDCRSGGGGGGGGSRGRGGGRGGGRGGGGRGRGRPDGCYNCGK 63
Query: 86 SGHFARNCPNDSS-------KRCYACHQAGHMAKECPGQTAGKSPEPVVDM-SLTCYVCG 137
SGH AR+C + CY C + GH ++ECP G TCY CG
Sbjct: 64 SGHLARDCQEPRQDGGGGGGRTCYTCGETGHFSRECPQGGGGGGGGGRSGGDDRTCYKCG 123
Query: 138 HQGHLSYDC 146
GH++ DC
Sbjct: 124 KPGHIARDC 132
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 47/127 (37%), Gaps = 21/127 (16%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
I+CYNC GH C G + G + CYNC G
Sbjct: 8 IECYNCGRQGHISRDCRSGGGGGGGGSRGRGGGRGGGRGGGGRGRGRPDG--CYNCGKSG 65
Query: 67 HVAKDC-------TVKSSIICYNCNSSGHFARNCPN------------DSSKRCYACHQA 107
H+A+DC CY C +GHF+R CP + CY C +
Sbjct: 66 HLARDCQEPRQDGGGGGGRTCYTCGETGHFSRECPQGGGGGGGGGRSGGDDRTCYKCGKP 125
Query: 108 GHMAKEC 114
GH+A++C
Sbjct: 126 GHIARDC 132
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 34/78 (43%), Gaps = 15/78 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-------------TE 55
CYNC GH C Q+ D G CY C GHF+REC +
Sbjct: 58 CYNCGKSGHLARDC-QEPRQDGGGGGG-RTCYTCGETGHFSRECPQGGGGGGGGGRSGGD 115
Query: 56 SVTCYNCSGQGHVAKDCT 73
TCY C GH+A+DC+
Sbjct: 116 DRTCYKCGKPGHIARDCS 133
>gi|242063850|ref|XP_002453214.1| hypothetical protein SORBIDRAFT_04g001720 [Sorghum bicolor]
gi|241933045|gb|EES06190.1| hypothetical protein SORBIDRAFT_04g001720 [Sorghum bicolor]
Length = 251
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 48/126 (38%), Gaps = 48/126 (38%)
Query: 38 VCYKCNNYGHFARECATESVT-----------------CYNCSGQGHVAKDCT------- 73
CYKC GH AR+C + C+ C GH+A+DC
Sbjct: 125 ACYKCGEPGHMARDCPSADGGGGGYGGGGGGYGGGGGGCFKCGEPGHMARDCPSGGGGYG 184
Query: 74 ---------VKSSIICYNCNSSGHFARNCPN---------------DSSKRCYACHQAGH 109
CYNC +GH AR+CP+ + CY C +AGH
Sbjct: 185 GGGGGGYGGGGGGGACYNCGQTGHMARDCPSGGGGGGGRFGGGGGGGGDRSCYNCGEAGH 244
Query: 110 MAKECP 115
+A++CP
Sbjct: 245 IARDCP 250
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 32/94 (34%), Gaps = 12/94 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGI-------VCYKCNNYGHFARECATESVTCYN 61
C+ C + GH CP G G CY C GH AR+C +
Sbjct: 163 CFKCGEPGHMARDCPSGGGGYGGGGGGGYGGGGGGGACYNCGQTGHMARDCPSGGGGGGG 222
Query: 62 CSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
CYNC +GH AR+CP
Sbjct: 223 -----RFGGGGGGGGDRSCYNCGEAGHIARDCPT 251
>gi|326654053|gb|AEA02915.1| gag protein [Human immunodeficiency virus 1]
Length = 493
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 23/40 (57%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
C+NC GH ARNC K C+ C + GH KECPG A
Sbjct: 387 CFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECPGMQA 426
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKECP 115
C+NC +GH+A++C C+ C GH + CP + + + H+ P
Sbjct: 387 CFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKECPGMQANFLGKIWPSHKGR------P 440
Query: 116 GQTAGKSPEP 125
G PEP
Sbjct: 441 GNFLQSRPEP 450
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 39 CYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
C+ C GH AR C A C+ C +GH K+C
Sbjct: 387 CFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKEC 421
>gi|51572094|gb|AAU06744.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A E+++ NC+ + K ++ C+NC GH ARNC
Sbjct: 346 CQGVGGPGHKARVLA-EAMSQTNCNIMMQRSNFKGSKRTVKCFNCGREGHIARNCRAPRK 404
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C Q GH K+C + A
Sbjct: 405 KGCWKCGQEGHQMKDCTERQA 425
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K + C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 375 SNFKGSKRTVKCFNCGREGHIARNCRAPRKKGCWKCGQEGHQMKDCTERQA 425
Score = 38.9 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 13/88 (14%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQT 118
C G GH A+ + ++ NCN + + + +C+ C + GH+A+ C
Sbjct: 346 CQGVGGPGHKAR--VLAEAMSQTNCNIMMQRSNFKGSKRTVKCFNCGREGHIARNC---- 399
Query: 119 AGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++P C+ CG +GH DC
Sbjct: 400 --RAPR-----KKGCWKCGQEGHQMKDC 420
>gi|294470716|gb|ADE80750.1| cold shock domain protein 3 [Eutrema salsugineum]
Length = 295
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 60/164 (36%), Gaps = 58/164 (35%)
Query: 9 CYNCFDFGHYQYSCPQ----------KSSADARGDKVGIV-------------------- 38
CYNC + GH+ C Q A +VG +
Sbjct: 128 CYNCGNVGHFARDCRQNAGGNSVGGGGGGACYNCGEVGHMAKDCRGGSGGNRYGGGGRGS 187
Query: 39 ----CYKCNNYGHFARECATESV-----------TCYNCSGQGHVAKDCTVK-------S 76
CY C + GHFAR+C TCY C G GH+A+ CT K
Sbjct: 188 GGEGCYMCGDVGHFARDCRQNVGGDVGGGGGGGNTCYTCGGFGHMARVCTSKRPSGGGGG 247
Query: 77 SIICYNCNSSGHFARNCPN------DSSKRCYACHQAGHMAKEC 114
CY C GH AR+C S +C+ C + GH A+EC
Sbjct: 248 VGACYECGGIGHLARDCDRRGSGGGSGSSKCFTCGKEGHFAREC 291
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 58/168 (34%), Gaps = 39/168 (23%)
Query: 14 DFGHYQYSC--PQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQ------ 65
+ GH C + R CY C N GHFAR+C + G
Sbjct: 101 EIGHMAKDCVGGKSFGGGGRRSGGEGSCYNCGNVGHFARDCRQNAGGNSVGGGGGGACYN 160
Query: 66 ----GHVAKDC-------------TVKSSIICYNCNSSGHFARNCPND----------SS 98
GH+AKDC CY C GHFAR+C +
Sbjct: 161 CGEVGHMAKDCRGGSGGNRYGGGGRGSGGEGCYMCGDVGHFARDCRQNVGGDVGGGGGGG 220
Query: 99 KRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C GHMA+ C K P CY CG GHL+ DC
Sbjct: 221 NTCYTCGGFGHMARVC----TSKRPSGGGGGVGACYECGGIGHLARDC 264
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 45/104 (43%), Gaps = 22/104 (21%)
Query: 66 GHVAKDCTVKSSII-----------CYNCNSSGHFARNCPNDSSKRCYACH--------- 105
GH+AKDC S CYNC + GHFAR+C ++
Sbjct: 103 GHMAKDCVGGKSFGGGGRRSGGEGSCYNCGNVGHFARDCRQNAGGNSVGGGGGGACYNCG 162
Query: 106 QAGHMAKECPGQTAGKSPEPVVDMSLT--CYVCGHQGHLSYDCK 147
+ GHMAK+C G + G S CY+CG GH + DC+
Sbjct: 163 EVGHMAKDCRGGSGGNRYGGGGRGSGGEGCYMCGDVGHFARDCR 206
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 9/72 (12%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT-------CYN 61
CY C FGH C K + CY+C GH AR+C C+
Sbjct: 223 CYTCGGFGHMARVCTSKRPSGGG--GGVGACYECGGIGHLARDCDRRGSGGGSGSSKCFT 280
Query: 62 CSGQGHVAKDCT 73
C +GH A++C+
Sbjct: 281 CGKEGHFARECS 292
>gi|134140571|gb|ABO61044.1| gag protein [Simian immunodeficiency virus]
Length = 505
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
CYNC GH AR+CP +++C+ C + GH+AK+C + A
Sbjct: 395 CYNCGQFGHMARSCPKPKTRKCFKCGREGHLAKQCRSEGA 434
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSG 64
+CYNC FGH SCP+ + C+KC GH A++C +E N G
Sbjct: 394 RCYNCGQFGHMARSCPKPKTRK---------CFKCGREGHLAKQCRSEGAKSANFLG 441
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 100 RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
RCY C Q GHMA+ CP K C+ CG +GHL+ C+
Sbjct: 394 RCYNCGQFGHMARSCPKPKTRK-----------CFKCGREGHLAKQCR 430
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK 99
CYNC GH+A+ C + C+ C GH A+ C ++ +K
Sbjct: 395 CYNCGQFGHMARSCPKPKTRKCFKCGREGHLAKQCRSEGAK 435
>gi|407038564|gb|EKE39189.1| zinc knuckle domain containing protein [Entamoeba nuttalli P19]
Length = 400
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 79 ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGH 138
+C+ C GH R+C K C+ C + GH+ K CP Q +S + TCY CG
Sbjct: 311 VCFKCGKPGHIGRDCSQPDDKVCFYCGKPGHIGKNCPEQEVPESSD-----QATCYKCGQ 365
Query: 139 QGHLSYDC 146
GH S DC
Sbjct: 366 VGHKSMDC 373
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN----DSSKR--CYACHQAGHMAK 112
C+ C GH+ +DC+ +C+ C GH +NCP +SS + CY C Q GH +
Sbjct: 312 CFKCGKPGHIGRDCSQPDDKVCFYCGKPGHIGKNCPEQEVPESSDQATCYKCGQVGHKSM 371
Query: 113 ECPGQTAG 120
+CP T G
Sbjct: 372 DCPENTEG 379
>gi|195638752|gb|ACG38844.1| actin depolymerizing factor [Zea mays]
Length = 276
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 55/130 (42%), Gaps = 20/130 (15%)
Query: 32 GDKVGIVCYKCNNYGHFARECATESV-----TCYNCSGQGHVAKDCTVKSS----IICYN 82
G + G C+ C + H A+ C +++ C C +GH K+C K CYN
Sbjct: 64 GMRPGERCFICKSTDHVAKACPEKALWDKKKICLLCRERGHSLKNCPDKXXGNLMKFCYN 123
Query: 83 CNSSGHFARNCPNDSSK------RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVC 136
C SGH CP C+ C+Q GH++K CP G P+ C VC
Sbjct: 124 CGESGHSLSKCPKPIENGGTNFASCFICNQQGHLSKNCPENKHGIYPK-----GGCCKVC 178
Query: 137 GHQGHLSYDC 146
G HL+ C
Sbjct: 179 GEVTHLARHC 188
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 22/127 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT-----CYNC 62
+C+ C H +CP+K+ D + +C C GH + C + CYNC
Sbjct: 70 RCFICKSTDHVAKACPEKALWDKK-----KICLLCRERGHSLKNCPDKXXGNLMKFCYNC 124
Query: 63 SGQGHVAKDCTVKSS------IICYNCNSSGHFARNCPNDSSKR------CYACHQAGHM 110
GH C C+ CN GH ++NCP + C C + H+
Sbjct: 125 GESGHSLSKCPKPIENGGTNFASCFICNQQGHLSKNCPENKHGIYPKGGCCKVCGEVTHL 184
Query: 111 AKECPGQ 117
A+ CP +
Sbjct: 185 ARHCPNK 191
>gi|912568|gb|AAB38060.1| gag polyprotein, partial [Human immunodeficiency virus 1]
Length = 463
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ +I C+NC GH ARNC + C+ C Q GH KECP + A
Sbjct: 387 RKTIKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKECPERQA 431
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
+ R + I C+ C GH AR C A C+ C +GH K+C
Sbjct: 381 GNVRNQRKTIKCFNCGKEGHLARNCRAPRKRGCWKCGQEGHQMKEC 426
>gi|112361446|gb|ABI15757.1| gag protein [Human immunodeficiency virus 1]
gi|117581790|gb|ABK41322.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 74 VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
V+ I C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 385 VQKRIKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKDCTGRQA 430
Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
I C+ C GH AR C A C+ C +GH KDCT
Sbjct: 389 IKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKDCT 426
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
+ C+NC +GH+A++C C+ C GH ++C
Sbjct: 389 IKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKDC 425
>gi|115459840|ref|NP_001053520.1| Os04g0555800 [Oryza sativa Japonica Group]
gi|38345588|emb|CAD41641.2| OSJNBb0012E24.6 [Oryza sativa Japonica Group]
gi|113565091|dbj|BAF15434.1| Os04g0555800 [Oryza sativa Japonica Group]
Length = 277
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 57/130 (43%), Gaps = 20/130 (15%)
Query: 32 GDKVGIVCYKCNNYGHFARECATESV-----TCYNCSGQGHVAKDCTVKS----SIICYN 82
G + G C+ C H A+ C +S+ C C +GH K+C K+ CYN
Sbjct: 65 GMRPGERCFICKAADHVAKVCPEKSLWEKNKICLLCRQRGHSLKNCPDKNDENLKKFCYN 124
Query: 83 CNSSGHFARNCP----NDSSK--RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVC 136
C SGH CP N +K C+ C Q GH++K CP G P+ C +C
Sbjct: 125 CGESGHSLSKCPKPIENGGTKFASCFVCKQQGHLSKNCPENKHGIYPK-----GGCCKIC 179
Query: 137 GHQGHLSYDC 146
G HL+ C
Sbjct: 180 GEVTHLAKHC 189
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 48/127 (37%), Gaps = 22/127 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT-----CYNC 62
+C+ C H CP+KS + +C C GH + C ++ CYNC
Sbjct: 71 RCFICKAADHVAKVCPEKSLWEK-----NKICLLCRQRGHSLKNCPDKNDENLKKFCYNC 125
Query: 63 SGQGHVAKDCTVKSS------IICYNCNSSGHFARNCPNDSSKR------CYACHQAGHM 110
GH C C+ C GH ++NCP + C C + H+
Sbjct: 126 GESGHSLSKCPKPIENGGTKFASCFVCKQQGHLSKNCPENKHGIYPKGGCCKICGEVTHL 185
Query: 111 AKECPGQ 117
AK CP +
Sbjct: 186 AKHCPNR 192
>gi|145519149|ref|XP_001445441.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412896|emb|CAK78044.1| unnamed protein product [Paramecium tetraurelia]
Length = 389
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 38 VCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVK---SSIICYNCNSSGHF 89
+C+KCN GH A++C E + C+ C+ +GH +KDC K ++C NC GH
Sbjct: 144 LCFKCNQAGHMAKDCDVEGIKCHRCNKKGHKSKDCNDKQRLKDLLCLNCQERGHL 198
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 27/98 (27%)
Query: 38 VCYKCNNYGHFAREC----ATESVTC-----------------YNCSGQGHVAKDCTVKS 76
VC +C GHF + C A VTC + C+ GH+AKDC V
Sbjct: 103 VCRRCKKPGHFEKWCVEDIAESKVTCRFCLGDHYFLKCPNSLCFKCNQAGHMAKDCDV-E 161
Query: 77 SIICYNCNSSGHFARNCPNDSSK----RCYACHQAGHM 110
I C+ CN GH +++C ND + C C + GH+
Sbjct: 162 GIKCHRCNKKGHKSKDC-NDKQRLKDLLCLNCQERGHL 198
>gi|393220397|gb|EJD05883.1| hypothetical protein FOMMEDRAFT_79565 [Fomitiporia mediterranea
MF3/22]
Length = 158
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Query: 8 QCYNCFDFGHYQYSCPQ----------KSSADARGDKVGIVCYKCNNYGHFARECATESV 57
+CY C GH +CP+ + G C+ C GH +R+C +
Sbjct: 70 ECYRCSKAGHIARNCPEAVGGGSGGGGGGYGGYNDNMRGKNCFTCGGLGHLSRDC-VKGA 128
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSG 87
CYNCSG GH+++DC +CY C S G
Sbjct: 129 KCYNCSGYGHISRDCPKPQQRVCYQCGSEG 158
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 52/141 (36%), Gaps = 35/141 (24%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIV-------------CYKCNNYGH 47
+ + +CY+C H CP + + G CY+C+ GH
Sbjct: 20 VGPPKSRECYSCGKTDHLARDCPDQPAERGGGYSSFSNNNSSNNNASSIQECYRCSKAGH 79
Query: 48 FARECA--------------------TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSG 87
AR C C+ C G GH+++DC + CYNC+ G
Sbjct: 80 IARNCPEAVGGGSGGGGGGYGGYNDNMRGKNCFTCGGLGHLSRDCVKGAK--CYNCSGYG 137
Query: 88 HFARNCPNDSSKRCYACHQAG 108
H +R+CP + CY C G
Sbjct: 138 HISRDCPKPQQRVCYQCGSEG 158
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 31/113 (27%)
Query: 65 QGHVAKDCT-VKSSIICYNCNSSGHFARNCPNDSSKR----------------------C 101
+GHV++DC S CY+C + H AR+CP+ ++R C
Sbjct: 12 EGHVSRDCVGPPKSRECYSCGKTDHLARDCPDQPAERGGGYSSFSNNNSSNNNASSIQEC 71
Query: 102 YACHQAGHMAKECPGQTAGKSPEPVVD--------MSLTCYVCGHQGHLSYDC 146
Y C +AGH+A+ CP G S C+ CG GHLS DC
Sbjct: 72 YRCSKAGHIARNCPEAVGGGSGGGGGGYGGYNDNMRGKNCFTCGGLGHLSRDC 124
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 53/150 (35%), Gaps = 42/150 (28%)
Query: 27 SADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII------C 80
S D G CY C H AR+C + G G+ + S+ C
Sbjct: 16 SRDCVGPPKSRECYSCGKTDHLARDCPDQPAE----RGGGYSSFSNNNSSNNNASSIQEC 71
Query: 81 YNCNSSGHFARNCP-------------------NDSSKRCYACHQAGHMAKECPGQTAGK 121
Y C+ +GH ARNCP N K C+ C GH++++C
Sbjct: 72 YRCSKAGHIARNCPEAVGGGSGGGGGGYGGYNDNMRGKNCFTCGGLGHLSRDCV------ 125
Query: 122 SPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
CY C GH+S DC Q+
Sbjct: 126 -------KGAKCYNCSGYGHISRDCPKPQQ 148
>gi|449485612|ref|XP_004157224.1| PREDICTED: uncharacterized LOC101212555 [Cucumis sativus]
Length = 396
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 21/131 (16%)
Query: 32 GDKVGIVCYKCNNYGHFARECATES-----VTCYNCSGQGHVAKDCTVKSS-----IICY 81
G K G C+ C H A+ C ++ C C +GH K+C K+ +CY
Sbjct: 71 GMKPGESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKNEGTVDKKLCY 130
Query: 82 NCNSSGHFARNCPN---DSSKR---CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
NC +GH NC D + C+ C++ GH++K CP T G P+ C
Sbjct: 131 NCGETGHSLANCSQPLQDGGTKFASCFICNEGGHLSKNCPKNTHGIYPK-----GGCCKT 185
Query: 136 CGHQGHLSYDC 146
CG HL+ DC
Sbjct: 186 CGEVTHLAKDC 196
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 23/127 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC------ATESVTCYNC 62
C+ C H CP+K+ + +C C GH + C + CYNC
Sbjct: 78 CFICKANDHIAKLCPEKAQWEKNK-----ICLLCRRRGHSLKNCPDKNEGTVDKKLCYNC 132
Query: 63 SGQGHVAKDCTVKSS------IICYNCNSSGHFARNCPNDSSKR------CYACHQAGHM 110
GH +C+ C+ CN GH ++NCP ++ C C + H+
Sbjct: 133 GETGHSLANCSQPLQDGGTKFASCFICNEGGHLSKNCPKNTHGIYPKGGCCKTCGEVTHL 192
Query: 111 AKECPGQ 117
AK+CP +
Sbjct: 193 AKDCPKK 199
>gi|223056226|gb|ACM80365.1| vasa [Asterias forbesi]
Length = 715
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 22/94 (23%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
CYKC+ GHFAREC + SG G ++ CY C+ +GHFAR CPN +
Sbjct: 122 CYKCHETGHFARECPNADSSGGGRSGGGGGSE---------CYKCHETGHFARECPNADA 172
Query: 99 KR-------------CYACHQAGHMAKECPGQTA 119
C+ C + GH+A++CP A
Sbjct: 173 SGGGRSGGGGGGSGACFKCQETGHIARDCPNAEA 206
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 37/80 (46%), Gaps = 13/80 (16%)
Query: 80 CYNCNSSGHFARNCPN-----------DSSKRCYACHQAGHMAKECPGQTA--GKSPEPV 126
CY C+ +GHFAR CPN CY CH+ GH A+ECP A G
Sbjct: 122 CYKCHETGHFARECPNADSSGGGRSGGGGGSECYKCHETGHFARECPNADASGGGRSGGG 181
Query: 127 VDMSLTCYVCGHQGHLSYDC 146
S C+ C GH++ DC
Sbjct: 182 GGGSGACFKCQETGHIARDC 201
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIV--CYKCNNYGHFARECATESVTCYNCSGQ 65
+CY C + GH+ CP S+ G CYKC+ GHFAREC N
Sbjct: 121 ECYKCHETGHFARECPNADSSGGGRSGGGGGSECYKCHETGHFARECP-------NADAS 173
Query: 66 GHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
G S C+ C +GH AR+CPN
Sbjct: 174 GGGRSGGGGGGSGACFKCQETGHIARDCPN 203
>gi|291225955|ref|XP_002732962.1| PREDICTED: Gap-Pol polyprotein-like [Saccoglossus kowalevskii]
Length = 1268
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 80 CYNCNSSGHFARNC--PNDSSKRCYACHQAGHMAKECP 115
CYNC GH +RNC P ++CY CH GH+AK+CP
Sbjct: 22 CYNCLKDGHLSRNCKAPKVEHRKCYNCHVEGHLAKDCP 59
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 59 CYNCSGQGHVAKDCTVK--SSIICYNCNSSGHFARNCPNDSSK 99
CYNC GH++++C CYNC+ GH A++CP K
Sbjct: 22 CYNCLKDGHLSRNCKAPKVEHRKCYNCHVEGHLAKDCPQKKQK 64
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 39 CYKCNNYGHFARECATESV---TCYNCSGQGHVAKDCTVK 75
CY C GH +R C V CYNC +GH+AKDC K
Sbjct: 22 CYNCLKDGHLSRNCKAPKVEHRKCYNCHVEGHLAKDCPQK 61
>gi|392578148|gb|EIW71276.1| hypothetical protein TREMEDRAFT_73248 [Tremella mesenterica DSM
1558]
Length = 1002
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 21/122 (17%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQ------KSSADARGDKVGIV----------CYKCNNY 45
S T +C+ C GH+ +CP +++ AR C+KC
Sbjct: 875 SGGQTGECFKCGQSGHWSSACPNDDGPPGRNAGPARSGASSNRNGNSGGGGGECFKCGQS 934
Query: 46 GHFARECATE---SVTCYNCSGQGHVAK--DCTVKSSIICYNCNSSGHFARNCPNDSSKR 100
GH+A C E S+T + Q A+ T S+ C+NC GH+A +CPN++ ++
Sbjct: 935 GHWASACPNEEGGSITSFPPKRQKTAARGGSGTKSSAGECFNCGKKGHWASDCPNEAGQK 994
Query: 101 CY 102
+
Sbjct: 995 SF 996
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 37/106 (34%), Gaps = 39/106 (36%)
Query: 80 CYNCNSSGHFARNCPNDS-------------------------SKRCYACHQAGHMAKEC 114
C+ C SGH++ CPND C+ C Q+GH A C
Sbjct: 882 CFKCGQSGHWSSACPNDDGPPGRNAGPARSGASSNRNGNSGGGGGECFKCGQSGHWASAC 941
Query: 115 PGQ--------------TAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
P + TA + + C+ CG +GH + DC
Sbjct: 942 PNEEGGSITSFPPKRQKTAARGGSGTKSSAGECFNCGKKGHWASDC 987
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 46/130 (35%), Gaps = 31/130 (23%)
Query: 23 PQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSII--- 79
P S+ G + G C+KC GH++ C + +G +
Sbjct: 867 PFPSNGSGSGGQTG-ECFKCGQSGHWSSACPNDDGPPGRNAGPARSGASSNRNGNSGGGG 925
Query: 80 --CYNCNSSGHFARNCPND-------------------------SSKRCYACHQAGHMAK 112
C+ C SGH+A CPN+ S+ C+ C + GH A
Sbjct: 926 GECFKCGQSGHWASACPNEEGGSITSFPPKRQKTAARGGSGTKSSAGECFNCGKKGHWAS 985
Query: 113 ECPGQTAGKS 122
+CP + KS
Sbjct: 986 DCPNEAGQKS 995
>gi|357493439|ref|XP_003617008.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355518343|gb|AES99966.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 638
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 62/159 (38%), Gaps = 36/159 (22%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHF----ARECATESV 57
+S S C C + GH + C S D D I CY C +GH E +
Sbjct: 347 NSKSLTVCLRCGNSGHDMFLCKNDYSQD---DLKEIQCYVCKKFGHLCCVNTTEAIPKEF 403
Query: 58 TCYNCSGQGHVAKDC----------TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQA 107
+CY C GH+ C T SS CY C GHFAR C SS + + Q
Sbjct: 404 SCYKCGQMGHIGWACSRLKNEATAATTPSS--CYKCGEQGHFAREC--SSSVKASSRWQ- 458
Query: 108 GHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
P T +P +CY CG +GH S +C
Sbjct: 459 -------PENTDPATPS-------SCYRCGEEGHFSREC 483
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 55/143 (38%), Gaps = 25/143 (17%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
C C GH CP+K + + + VC +C N GH + C N Q +
Sbjct: 325 CSTCKLAGHRSSDCPKKHTGGSNSKSL-TVCLRCGNSGH-------DMFLCKNDYSQDDL 376
Query: 69 AKDCTVKSSIICYNCNSSGHF-----ARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
+ I CY C GH P + S CY C Q GH+ C + K+
Sbjct: 377 KE-------IQCYVCKKFGHLCCVNTTEAIPKEFS--CYKCGQMGHIGWAC---SRLKNE 424
Query: 124 EPVVDMSLTCYVCGHQGHLSYDC 146
+CY CG QGH + +C
Sbjct: 425 ATAATTPSSCYKCGEQGHFAREC 447
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 58 TCYNCSGQGHVAKDCTV-KSSIICYNCNSSGHF-ARNCPNDSSKRCYACHQAGHMAKECP 115
TCYNC +GH + +CT K C+ C S H + C + C C AGH + +CP
Sbjct: 282 TCYNCGEEGHASFNCTAAKRKKPCFVCGSLSHNNGKKCI--MGRYCSTCKLAGHRSSDCP 339
Query: 116 GQTAGKSPEPVVDMSLT-CYVCGHQGHLSYDCK 147
+ G S SLT C CG+ GH + CK
Sbjct: 340 KKHTGGSN----SKSLTVCLRCGNSGHDMFLCK 368
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 54/158 (34%), Gaps = 44/158 (27%)
Query: 29 DARGDKVGIVCYKCNNYGHFARECATESVT----------------------CYNCSGQG 66
D D V CY C GH + C C C G
Sbjct: 273 DPPSDNVWGTCYNCGEEGHASFNCTAAKRKKPCFVCGSLSHNNGKKCIMGRYCSTCKLAG 332
Query: 67 HVAKDC--------TVKSSIICYNCNSSGHFARNCPNDSSK------RCYACHQAGHMAK 112
H + DC KS +C C +SGH C ND S+ +CY C + GH+
Sbjct: 333 HRSSDCPKKHTGGSNSKSLTVCLRCGNSGHDMFLCKNDYSQDDLKEIQCYVCKKFGHLC- 391
Query: 113 ECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
C T + +CY CG GH+ + C ++
Sbjct: 392 -CVNTTE------AIPKEFSCYKCGQMGHIGWACSRLK 422
>gi|403343293|gb|EJY70972.1| Arginine methyltransferase-interacting protein, contains RING
Zn-finger [Oxytricha trifallax]
Length = 869
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 6/108 (5%)
Query: 37 IVCYKCNNYGHFARECA--TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
I C C YGH AREC T+ C C H + C KS C+ CN GH A C
Sbjct: 393 IKCRNCLEYGHIARECTNKTKRPNCILCGKDTHDSFSCNEKS---CFKCNKIGHLASQCT 449
Query: 95 NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHL 142
+ RC C GH C G + + + L C CG +GHL
Sbjct: 450 ERNVTRCNRCDLVGHKEARCLKVWKGNYNDSQMSL-LRCIQCGSKGHL 496
>gi|390357067|ref|XP_003728921.1| PREDICTED: uncharacterized protein LOC100894010 [Strongylocentrotus
purpuratus]
Length = 1702
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
S+ CYNCN GH R C +S CY C Q GHM ++CP
Sbjct: 282 STSFCYNCNKKGHLKREC--NSPTLCYGCKQTGHMRRDCP 319
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR 100
CYNC+ +GH+ ++C S +CY C +GH R+CP + R
Sbjct: 286 CYNCNKKGHLKRECN--SPTLCYGCKQTGHMRRDCPREVGVR 325
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDC 72
CY CN GH REC + ++ CY C GH+ +DC
Sbjct: 286 CYNCNKKGHLKRECNSPTL-CYGCKQTGHMRRDC 318
Score = 38.9 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 14/56 (25%)
Query: 92 NCPNDSSKR-CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
N P SS CY C++ GH+ +EC T CY C GH+ DC
Sbjct: 276 NNPRQSSTSFCYNCNKKGHLKRECNSPT-------------LCYGCKQTGHMRRDC 318
Score = 37.0 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 11/52 (21%)
Query: 4 TSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE 55
+ST CYNC GH + C + +CY C GH R+C E
Sbjct: 281 SSTSFCYNCNKKGHLKRECNSPT-----------LCYGCKQTGHMRRDCPRE 321
>gi|164662623|ref|XP_001732433.1| hypothetical protein MGL_0208 [Malassezia globosa CBS 7966]
gi|159106336|gb|EDP45219.1| hypothetical protein MGL_0208 [Malassezia globosa CBS 7966]
Length = 200
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 18/116 (15%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARG-DKVGIVCYKCNNYGHFARECATES--------- 56
++C+ C F H CP S D +G D VGI C++C + H +C
Sbjct: 25 MRCFVCRAFSHAAKDCPHNVSGDTQGKDTVGI-CFRCGSTEHSLAQCRRPRSEQADELPF 83
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYN-------CNSSGHFARNCPNDSSKRCYACH 105
TCY CS +GH+A C Y C S H AR+CP D + +A H
Sbjct: 84 ATCYICSEKGHLASKCPQNKGKSVYPDGGECKVCGSVEHLARDCPRDPRRITHASH 139
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 27/128 (21%)
Query: 28 ADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSI-ICYNCNSS 86
A+ R +K + C+ C + H A++C +N SG D K ++ IC+ C S+
Sbjct: 18 AEERKNK--MRCFVCRAFSHAAKDCP------HNVSG------DTQGKDTVGICFRCGST 63
Query: 87 GHFARNCPNDSSKR--------CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGH 138
H C S++ CY C + GH+A +CP Q GKS V C VCG
Sbjct: 64 EHSLAQCRRPRSEQADELPFATCYICSEKGHLASKCP-QNKGKS---VYPDGGECKVCGS 119
Query: 139 QGHLSYDC 146
HL+ DC
Sbjct: 120 VEHLARDC 127
>gi|294463728|gb|ADE77389.1| unknown [Picea sitchensis]
Length = 301
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 54/130 (41%), Gaps = 20/130 (15%)
Query: 32 GDKVGIVCYKCNNYGHFARECATE-----SVTCYNCSGQGHVAKDC----TVKSSIICYN 82
G K G C+ C H A+ C ++ C C +GH K C + CYN
Sbjct: 68 GSKPGEGCFICGARDHIAKGCPSKDRWDREKICLLCRERGHTMKHCYNNQQNHETKYCYN 127
Query: 83 CNSSGHFARNCPNDSSK------RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVC 136
C +GH CP C+ C + GH++K CP T G P+ +C +C
Sbjct: 128 CGETGHRLSECPEPIQNGGTAFAECFLCKERGHLSKNCPTNTHGIYPK-----GGSCKIC 182
Query: 137 GHQGHLSYDC 146
G HL+ DC
Sbjct: 183 GGLTHLAKDC 192
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 49/130 (37%), Gaps = 22/130 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT-----ESVTCYNCS 63
C+ C H CP K D +C C GH + C E+ CYNC
Sbjct: 75 CFICGARDHIAKGCPSKDRWDRE-----KICLLCRERGHTMKHCYNNQQNHETKYCYNCG 129
Query: 64 GQGHVAKDCTVK------SSIICYNCNSSGHFARNCPNDS------SKRCYACHQAGHMA 111
GH +C + C+ C GH ++NCP ++ C C H+A
Sbjct: 130 ETGHRLSECPEPIQNGGTAFAECFLCKERGHLSKNCPTNTHGIYPKGGSCKICGGLTHLA 189
Query: 112 KECPGQTAGK 121
K+CP + K
Sbjct: 190 KDCPEKNTEK 199
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 10/80 (12%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES-------V 57
T CYNC + GH CP+ G C+ C GH ++ C T +
Sbjct: 121 ETKYCYNCGETGHRLSECPEPIQ---NGGTAFAECFLCKERGHLSKNCPTNTHGIYPKGG 177
Query: 58 TCYNCSGQGHVAKDCTVKSS 77
+C C G H+AKDC K++
Sbjct: 178 SCKICGGLTHLAKDCPEKNT 197
>gi|307213243|gb|EFN88735.1| hypothetical protein EAI_13102 [Harpegnathos saltator]
Length = 115
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 21/120 (17%)
Query: 42 CNNYGHFARECAT----ESVTCYNCSGQGHVAKDCTVKSS----IICYNCNSSGHFARNC 93
C GH A+ C +++ C NC GH +++ SS IC NCN GH ARNC
Sbjct: 1 CPKTGHTAQNCLLYRNQQNIICQNCQRPGHSSREYRSNSSNINTSICRNCNKMGHIARNC 60
Query: 94 PNDSS-------KRCYACHQAGHMAKEC-PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYD 145
+S+ + C C++ GH+ +C Q A PV TC VCG GH + D
Sbjct: 61 FANSNYNSTLSEEICQWCNRRGHLGSQCRERQIAKNQSRPV-----TCQVCGKSGHNARD 115
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 11/96 (11%)
Query: 62 CSGQGHVAKDCTV---KSSIICYNCNSSGHFAR----NCPNDSSKRCYACHQAGHMAKEC 114
C GH A++C + + +IIC NC GH +R N N ++ C C++ GH+A+ C
Sbjct: 1 CPKTGHTAQNCLLYRNQQNIICQNCQRPGHSSREYRSNSSNINTSICRNCNKMGHIARNC 60
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQ 150
A + + + C C +GHL C+ Q
Sbjct: 61 ---FANSNYNSTLSEEI-CQWCNRRGHLGSQCRERQ 92
>gi|37728011|gb|AAR02376.1| gag protein [Simian immunodeficiency virus]
Length = 510
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
C+NC GH A+NC ++CY C Q GH+AK+CP
Sbjct: 397 CFNCGKFGHMAKNCKAPQRRKCYNCGQPGHLAKDCP 432
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
C+NC GH+AK+C CYNC GH A++CP
Sbjct: 397 CFNCGKFGHMAKNCKAPQRRKCYNCGQPGHLAKDCP 432
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 39 CYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
C+ C +GH A+ C A + CYNC GH+AKDC
Sbjct: 397 CFNCGKFGHMAKNCKAPQRRKCYNCGQPGHLAKDC 431
Score = 42.0 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 12/58 (20%)
Query: 90 ARNCPNDSSK-RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
AR P + +C+ C + GHMAK C K+P+ CY CG GHL+ DC
Sbjct: 385 ARGPPQRKGQPKCFNCGKFGHMAKNC------KAPQ-----RRKCYNCGQPGHLAKDC 431
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 13/47 (27%)
Query: 8 QCYNCFDFGHYQYSC--PQKSSADARGDKVGIVCYKCNNYGHFAREC 52
+C+NC FGH +C PQ+ CY C GH A++C
Sbjct: 396 KCFNCGKFGHMAKNCKAPQRRK-----------CYNCGQPGHLAKDC 431
>gi|346974775|gb|EGY18227.1| DNA-binding protein HEXBP [Verticillium dahliae VdLs.17]
Length = 462
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
TC NC GH+ ++C ++C C+ GH R+CPN ++ C C Q GH+ EC
Sbjct: 138 TCNNCGEPGHMRRECPSLPPMVCNFCHEEGHMRRDCPNKPAEVCRNCQQEGHLVSEC 194
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
C NC GH R CP+ C CH+ GHM ++CP + A C C +
Sbjct: 139 CNNCGEPGHMRRECPSLPPMVCNFCHEEGHMRRDCPNKPAE-----------VCRNCQQE 187
Query: 140 GHLSYDCKLVQK 151
GHL +C +K
Sbjct: 188 GHLVSECNNPRK 199
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 38 VCYKCNNYGHFARECAT-ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
C C GH REC + + C C +GH+ +DC K + +C NC GH C N
Sbjct: 138 TCNNCGEPGHMRRECPSLPPMVCNFCHEEGHMRRDCPNKPAEVCRNCQQEGHLVSECNN 196
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 20/76 (26%)
Query: 59 CYNCSGQGHVAKDCTV------KSSIICYNCNSSGHFARNCP--------------NDSS 98
C NC GH++K+CT K SI CYNC+ GH R+CP S+
Sbjct: 330 CTNCKELGHISKNCTADRQEIEKVSIRCYNCDEGGHRVRDCPVPRKDNLAMLTALNATSA 389
Query: 99 KRCYACHQAGHMAKEC 114
RC C + GH C
Sbjct: 390 MRCLNCGEMGHKKYNC 405
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 20/88 (22%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARG-DKVGIVCYKCNNYGHFAREC-------- 52
+ T +C NC + GH +C +AD + +KV I CY C+ GH R+C
Sbjct: 323 APTGKPRCTNCKELGHISKNC----TADRQEIEKVSIRCYNCDEGGHRVRDCPVPRKDNL 378
Query: 53 -------ATESVTCYNCSGQGHVAKDCT 73
AT ++ C NC GH +CT
Sbjct: 379 AMLTALNATSAMRCLNCGEMGHKKYNCT 406
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 80 CYNCNSSGHFARNCPNDS------SKRCYACHQAGHMAKECP---GQTAGKSPEPVVDMS 130
C NC GH ++NC D S RCY C + GH ++CP +
Sbjct: 330 CTNCKELGHISKNCTADRQEIEKVSIRCYNCDEGGHRVRDCPVPRKDNLAMLTALNATSA 389
Query: 131 LTCYVCGHQGHLSYDC 146
+ C CG GH Y+C
Sbjct: 390 MRCLNCGEMGHKKYNC 405
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 36/98 (36%), Gaps = 21/98 (21%)
Query: 39 CYKCNNYGHFARECATE-------SVTCYNCSGQGHVAKDCTVK--------------SS 77
C C GH ++ C + S+ CYNC GH +DC V S+
Sbjct: 330 CTNCKELGHISKNCTADRQEIEKVSIRCYNCDEGGHRVRDCPVPRKDNLAMLTALNATSA 389
Query: 78 IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
+ C NC GH NC N H AG + P
Sbjct: 390 MRCLNCGEMGHKKYNCTNPHVDEDAQGHDAGGGGGDLP 427
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 10/71 (14%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV-TCYNCSGQGH 67
C NC + GH + CP +VC C+ GH R+C + C NC +GH
Sbjct: 139 CNNCGEPGHMRRECPSLPP---------MVCNFCHEEGHMRRDCPNKPAEVCRNCQQEGH 189
Query: 68 VAKDCTVKSSI 78
+ +C I
Sbjct: 190 LVSECNNPRKI 200
>gi|158931144|sp|P05895.2|POL_SIVVT RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Nucleocapsid protein p7;
Short=NC; Contains: RecName: Full=p6-pol; Short=p6*;
Contains: RecName: Full=Protease; AltName: Full=PR;
AltName: Full=Retropepsin; Contains: RecName:
Full=Reverse transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1467
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
+ + CYNC GH R CP RC C + GH+AK+C GQ
Sbjct: 399 RPPVKCYNCGKFGHMQRQCPEPRKMRCLKCGKPGHLAKDCRGQ 441
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 9/46 (19%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC 52
++CYNC FGH Q CP+ + C KC GH A++C
Sbjct: 402 VKCYNCGKFGHMQRQCPEPRK---------MRCLKCGKPGHLAKDC 438
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 100 RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+CY C + GHM ++C PEP + C CG GHL+ DC+
Sbjct: 403 KCYNCGKFGHMQRQC--------PEP---RKMRCLKCGKPGHLAKDCR 439
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
V CYNC GH+ + C + C C GH A++C
Sbjct: 402 VKCYNCGKFGHMQRQCPEPRKMRCLKCGKPGHLAKDC 438
>gi|158931143|sp|P27980.2|POL_SIVVG RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Nucleocapsid protein p7;
Short=NC; Contains: RecName: Full=p6-pol; Short=p6*;
Contains: RecName: Full=Protease; AltName: Full=PR;
AltName: Full=Retropepsin; Contains: RecName:
Full=Reverse transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1465
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
+ + CYNC GH R CP RC C + GH+AK+C GQ
Sbjct: 399 RPPVKCYNCGKFGHMQRQCPEPRKMRCLKCGKPGHLAKDCRGQ 441
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 9/46 (19%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC 52
++CYNC FGH Q CP+ + C KC GH A++C
Sbjct: 402 VKCYNCGKFGHMQRQCPEPRK---------MRCLKCGKPGHLAKDC 438
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 100 RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+CY C + GHM ++C PEP + C CG GHL+ DC+
Sbjct: 403 KCYNCGKFGHMQRQC--------PEP---RKMRCLKCGKPGHLAKDCR 439
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
V CYNC GH+ + C + C C GH A++C
Sbjct: 402 VKCYNCGKFGHMQRQCPEPRKMRCLKCGKPGHLAKDC 438
>gi|341897961|gb|EGT53896.1| hypothetical protein CAEBREN_03982 [Caenorhabditis brenneri]
Length = 147
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 58/143 (40%), Gaps = 34/143 (23%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT---------- 54
S CY C GH +CPQ+ R G CY C GHF+R+C
Sbjct: 2 SDQSCYKCQQPGHISRNCPQREQDSGR-RGGGSTCYNCQETGHFSRDCPKGGSGGQRSGG 60
Query: 55 ESVTCYNCSGQGHVAKDC--------------------TVKSSIICYNCNSSGHFARNCP 94
+CYNC G+GH ++DC CYNC GH +R C
Sbjct: 61 GGGSCYNCGGRGHFSRDCPSARDDGGSRGYGGGRGGGSRSFGGQKCYNCGRQGHISRECT 120
Query: 95 NDSS---KRCYACHQAGHMAKEC 114
S KRCY C GH++++C
Sbjct: 121 ESGSAEEKRCYNCQGTGHISRDC 143
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 26/115 (22%)
Query: 58 TCYNCSGQGHVAKDCTVKSSI--------ICYNCNSSGHFARNCPNDSSKRCYACHQA-- 107
+CY C GH++++C + CYNC +GHF+R+CP S +
Sbjct: 5 SCYKCQQPGHISRNCPQREQDSGRRGGGSTCYNCQETGHFSRDCPKGGSGGQRSGGGGGS 64
Query: 108 -------GHMAKECPG---------QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GH +++CP G+ CY CG QGH+S +C
Sbjct: 65 CYNCGGRGHFSRDCPSARDDGGSRGYGGGRGGGSRSFGGQKCYNCGRQGHISREC 119
>gi|37934024|gb|AAO43849.1| gag-pol fusion polyprotein [Human immunodeficiency virus 1]
Length = 575
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ ++ C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 34 RKTVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQA 78
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK--RCYACHQAGHMAK 112
++V C+NC +GH+A++C C+ C GH ++C + R G
Sbjct: 35 KTVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQANFFRENLAFPQGEARX 94
Query: 113 ECPGQTAGKSP 123
P QT SP
Sbjct: 95 FSPEQTRANSP 105
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
R + + C+ C GH AR C A C+ C +GH KDCT
Sbjct: 31 RNQRKTVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCT 74
>gi|5733379|gb|AAD49554.1|AF095843_1 unknown [Entosiphon sulcatum]
Length = 236
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 37 IVCYKCNNYGHFARECATESV---------TCYNCSGQGHVAKDCTVKSSIICYNCNSSG 87
I+C +C GH A C S C+NC+G H+A+DC + + C C+ G
Sbjct: 100 IICTRCERSGHTAANCPLPSAECPFPVRDGLCFNCNGP-HLARDCPIGQRV-CRQCHRPG 157
Query: 88 HFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKS 122
H A +CP +S C+AC GH AK C GK+
Sbjct: 158 HCATSCP-ESPLLCHACGDPGHKAKHCTKNPRGKA 191
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 59/162 (36%), Gaps = 43/162 (26%)
Query: 9 CYNCFDFGHYQYSCP----QKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSG 64
C+NC+ H + CP + + + D V Y + C C G
Sbjct: 41 CHNCYQPFHRTFECPGPGHTEEAPEPEPDSVVKPSYTEKKV----------VLVCRACQG 90
Query: 65 QGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK--------RCYACHQAGHMAKEC-- 114
H C + IIC C SGH A NCP S++ C+ C H+A++C
Sbjct: 91 P-HAIDKCPM---IICTRCERSGHTAANCPLPSAECPFPVRDGLCFNC-NGPHLARDCPI 145
Query: 115 ----------PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
PG A PE L C+ CG GH + C
Sbjct: 146 GQRVCRQCHRPGHCATSCPE----SPLLCHACGDPGHKAKHC 183
>gi|390344843|ref|XP_001199064.2| PREDICTED: uncharacterized protein LOC763171 [Strongylocentrotus
purpuratus]
Length = 849
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 61/144 (42%), Gaps = 20/144 (13%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
I+C+NC + GH + CP+ A C C GH R C + C+NCS G
Sbjct: 366 IRCHNCNEMGHQKSECPKPLHIPA--------CVLCGTRGHTDRNCPDQ--LCFNCSLPG 415
Query: 67 HVAKDCTVKSSI---ICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSP 123
H +K C VK I C C GH + CP D ++ + + G + + K
Sbjct: 416 HQSKACPVKRHIRYARCTRCQMQGHLRKMCP-DIWRQYHLTTEHGPIVRPSSQHHRTKQK 474
Query: 124 EPVVDMSLTCYVCGHQGHLSYDCK 147
+ L C C +GH +DC+
Sbjct: 475 D------LYCSNCSKKGHRYFDCR 492
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 12/102 (11%)
Query: 46 GHFARECATESVTCYNCSGQGHVAKDCTVKSSI-ICYNCNSSGHFARNCPNDSSKRCYAC 104
G + + + + C+NC+ GH +C I C C + GH RNCP+ + C+ C
Sbjct: 355 GRYFVQSRQKHIRCHNCNEMGHQKSECPKPLHIPACVLCGTRGHTDRNCPD---QLCFNC 411
Query: 105 HQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
GH +K CP + + C C QGHL C
Sbjct: 412 SLPGHQSKACPVKRHIRYAR--------CTRCQMQGHLRKMC 445
>gi|443724924|gb|ELU12718.1| hypothetical protein CAPTEDRAFT_214530 [Capitella teleta]
Length = 565
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 11/50 (22%)
Query: 76 SSIICYNCNSSGHFARNCPN---------DSSKR--CYACHQAGHMAKEC 114
S +CYNCN GHF+R CP DS +R C+ CH+ GH A++C
Sbjct: 497 SPAVCYNCNEPGHFSRECPKEKRPSRPRADSPERPQCFNCHEPGHYARDC 546
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 12/47 (25%)
Query: 38 VCYKCNNYGHFAREC------------ATESVTCYNCSGQGHVAKDC 72
VCY CN GHF+REC + E C+NC GH A+DC
Sbjct: 500 VCYNCNEPGHFSRECPKEKRPSRPRADSPERPQCFNCHEPGHYARDC 546
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 101 CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
CY C++ GH ++ECP + P C+ C GH + DC ++S
Sbjct: 501 CYNCNEPGHFSRECPKEKRPSRPRADSPERPQCFNCHEPGHYARDCHKARRS 552
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 3 STSTIQCYNCFDFGHYQYSCP-QKSSADARGDKVG-IVCYKCNNYGHFAREC 52
S S CYNC + GH+ CP +K + R D C+ C+ GH+AR+C
Sbjct: 495 SPSPAVCYNCNEPGHFSRECPKEKRPSRPRADSPERPQCFNCHEPGHYARDC 546
>gi|213137433|gb|ACJ44398.1| gag protein [Human immunodeficiency virus 1]
Length = 484
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A E+++ N + + K I C+NC GH ARNC
Sbjct: 333 CQGVGGPGHKARVLA-EAMSQANSNIMMQRSNFKGPKRIIKCFNCGKEGHIARNCKAPRK 391
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C Q GH K+C G+ A
Sbjct: 392 KGCWKCGQEGHQMKDCTGRQA 412
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
++ +G K I C+ C GH AR C A C+ C +GH KDCT
Sbjct: 362 SNFKGPKRIIKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCT 408
>gi|183206828|gb|ACC54576.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A E+++ +G + + I C+NC GH ARNC
Sbjct: 350 CQGVGGPGHKARVLA-EAMSQVQQAGIMMQRGNFKGQKRIKCFNCGKEGHLARNCRAPRR 408
Query: 99 KRCYACHQAGHMAKECPGQ 117
K C+ C + GH K+CPG+
Sbjct: 409 KGCWKCGKEGHQMKDCPGE 427
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
I C+ C GH AR C A C+ C +GH KDC
Sbjct: 388 IKCFNCGKEGHLARNCRAPRRKGCWKCGKEGHQMKDC 424
>gi|156082886|ref|XP_001608927.1| zinc knuckle domain containing protein [Babesia bovis T2Bo]
gi|154796177|gb|EDO05359.1| zinc knuckle domain containing protein [Babesia bovis]
Length = 200
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 58 TCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC--PNDSS---KRCYACHQAGHMAK 112
TC+ C +GH ++C+ IC+ C S+ H R+C P++ + C+ C + GH+A
Sbjct: 103 TCFKCRKRGHTLRECSAAEVGICFRCGSTDHILRDCQDPDNGTLPFTSCFICKKNGHIAS 162
Query: 113 ECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
+CP G P C+ CG HL C +KS
Sbjct: 163 QCPDNDKGIYPN-----GGCCFFCGSVTHLKAMCPERRKS 197
>gi|37727497|gb|AAR02350.1| gag protein [Simian immunodeficiency virus]
Length = 506
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 25/45 (55%)
Query: 73 TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
T + I CYNC GH ARNC K C+ C Q GH K+C G+
Sbjct: 392 TPRRKIKCYNCGKEGHLARNCKAPRRKGCWKCGQEGHQMKDCSGR 436
Score = 42.0 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
+ CYNC +GH+A++C C+ C GH ++C
Sbjct: 397 IKCYNCGKEGHLARNCKAPRRKGCWKCGQEGHQMKDC 433
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
I CY C GH AR C A C+ C +GH KDC+
Sbjct: 397 IKCYNCGKEGHLARNCKAPRRKGCWKCGQEGHQMKDCS 434
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 15/91 (16%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECP 115
C G H A+ +++ + F + P + +R CY C + GH+A+ C
Sbjct: 355 CQGVGGPAHKARVLAEAMTMVQSQARTDIFFQKG-PGATPRRKIKCYNCGKEGHLARNC- 412
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
K+P C+ CG +GH DC
Sbjct: 413 -----KAPR-----RKGCWKCGQEGHQMKDC 433
>gi|62997574|gb|AAY24633.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKS---SIICYNCNSSGHFARNCPN 95
C GH AR A E+++ +C+G + + K +I C+NC GH ARNC
Sbjct: 350 CQGVGGPGHKARVLA-EAMSQVSCAGASILMQKSNFKGPKRNIKCFNCGKEGHLARNCRA 408
Query: 96 DSSKRCYACHQAGHMAKECPGQTA 119
K C+ C + GH K+C + A
Sbjct: 409 PRKKGCWKCGKEGHQMKDCTERQA 432
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 19 QYSCPQKS----SADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
Q SC S ++ +G K I C+ C GH AR C A C+ C +GH KDCT
Sbjct: 369 QVSCAGASILMQKSNFKGPKRNIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCT 428
Query: 74 VKSS 77
+ +
Sbjct: 429 ERQA 432
>gi|452819791|gb|EME26843.1| cellular nucleic acid-binding protein [Galdieria sulphuraria]
Length = 301
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 18/145 (12%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
S S + C NC GH+ CP+ + VG C+ C GH AR C+ E C+NC
Sbjct: 94 SESNVVCSNCGLAGHFSVFCPE--------EVVGRRCFLCGGEGHLARNCSEE--LCHNC 143
Query: 63 SGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKS 122
GH K+CT+ + + N +CY C + GH+ +C +
Sbjct: 144 LRPGHKRKNCTLPRRDWRREEKHAYPKYEDLKNVKKLKCYICGKTGHL--DCSFEKMK-- 199
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDCK 147
S++CY CG GH C+
Sbjct: 200 ----FCKSISCYNCGQSGHSGGSCR 220
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 14/105 (13%)
Query: 49 ARECATESVTCYNCSGQGHVAKDCTVK-SSIICYNCNSSGHFARNCPNDSSKRCYACHQA 107
AR + +V C NC GH + C + C+ C GH ARNC S + C+ C +
Sbjct: 90 ARYFSESNVVCSNCGLAGHFSVFCPEEVVGRRCFLCGGEGHLARNC---SEELCHNCLRP 146
Query: 108 GHMAKEC--PGQTAGKSPE---PVVD-----MSLTCYVCGHQGHL 142
GH K C P + + + P + L CY+CG GHL
Sbjct: 147 GHKRKNCTLPRRDWRREEKHAYPKYEDLKNVKKLKCYICGKTGHL 191
>gi|451168116|gb|AGF30841.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ ++ C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 382 RRTVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQA 426
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 53 ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGH 109
A +V C+NC +GH+A++C C+ C GH ++C + + + H+
Sbjct: 381 ARRTVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQANFLGKIWPSHKGR- 439
Query: 110 MAKECPGQTAGKSPEP 125
PG PEP
Sbjct: 440 -----PGNFLQSRPEP 450
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
++ +G + + C+ C GH AR C A C+ C +GH KDCT
Sbjct: 376 SNFKGARRTVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCT 422
>gi|357168159|ref|XP_003581512.1| PREDICTED: uncharacterized protein LOC100826202 [Brachypodium
distachyon]
Length = 422
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 56/143 (39%), Gaps = 33/143 (23%)
Query: 32 GDKVGIVCYKCNNYGHFARECATESV-----TCYNCSGQGHVAKDCTVKSS----IICYN 82
G + G C+ C + H A+ C +S+ C C +GH K+C KS CYN
Sbjct: 66 GMRPGERCFICKSTDHVAKTCPEKSLWDKNKICLLCRERGHSLKNCPEKSDGDLKKFCYN 125
Query: 83 CNSSGHFARNCPNDSSK-------------------RCYACHQAGHMAKECPGQTAGKSP 123
C SGH CP C+ C Q GH++K+CP G P
Sbjct: 126 CGGSGHSLSKCPKPIENGTLHPHFLLIDFAGGTNFASCFVCKQQGHLSKDCPENKHGIYP 185
Query: 124 EPVVDMSLTCYVCGHQGHLSYDC 146
+ C VCG HL+ C
Sbjct: 186 K-----GGCCKVCGEVTHLARHC 203
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 54/140 (38%), Gaps = 35/140 (25%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES-----VTCYNC 62
+C+ C H +CP+KS D +C C GH + C +S CYNC
Sbjct: 72 RCFICKSTDHVAKTCPEKSLWDK-----NKICLLCRERGHSLKNCPEKSDGDLKKFCYNC 126
Query: 63 SGQGHVAKDCT--VKSSII-----------------CYNCNSSGHFARNCPNDSSKR--- 100
G GH C +++ + C+ C GH +++CP +
Sbjct: 127 GGSGHSLSKCPKPIENGTLHPHFLLIDFAGGTNFASCFVCKQQGHLSKDCPENKHGIYPK 186
Query: 101 ---CYACHQAGHMAKECPGQ 117
C C + H+A+ CP +
Sbjct: 187 GGCCKVCGEVTHLARHCPNK 206
>gi|217038368|gb|ACJ76654.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
C+NC GH A+NC K C+ C Q GH K+CPG+ A
Sbjct: 392 CFNCGKDGHIAKNCRAPRKKGCWKCGQEGHQMKDCPGRQA 431
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKE 113
V C+NC GH+AK+C C+ C GH ++CP + + + H+
Sbjct: 390 VKCFNCGKDGHIAKNCRAPRKKGCWKCGQEGHQMKDCPGRQANFLGKIWPSHKGR----- 444
Query: 114 CPGQTAGKSPEP 125
PG PEP
Sbjct: 445 -PGNFLQSRPEP 455
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
R + + C+ C GH A+ C A C+ C +GH KDC
Sbjct: 384 RNQRKIVKCFNCGKDGHIAKNCRAPRKKGCWKCGQEGHQMKDC 426
>gi|145351919|ref|XP_001420307.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580541|gb|ABO98600.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 267
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 42/111 (37%), Gaps = 24/111 (21%)
Query: 9 CYNCFDFGHYQYSCPQKSSADA----------RGDKVGIVCYKCNNYGHFAREC------ 52
C+NC GH C Q A +G VC +C GH+A C
Sbjct: 128 CHNCGRVGHIARDCRQGGGARGYDNARAPKQRKGAGPDDVCNRCGEKGHWASSCSQPDTR 187
Query: 53 --------ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
A C+ C GH AKDC++ C C GHFAR CPN
Sbjct: 188 TEAERTRQAKPDDKCHRCGELGHFAKDCSLPPDNTCRICKQEGHFARECPN 238
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 59/163 (36%), Gaps = 37/163 (22%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGI--VCYKCNNYGHFAREC------------- 52
+C C GHY +CP + A G G C+ C GH AR+C
Sbjct: 95 RCSRCGGLGHYARACPSPAMAAFAGGAGGAPKTCHNCGRVGHIARDCRQGGGARGYDNAR 154
Query: 53 -------ATESVTCYNCSGQGHVAKDCT-------------VKSSIICYNCNSSGHFARN 92
A C C +GH A C+ K C+ C GHFA++
Sbjct: 155 APKQRKGAGPDDVCNRCGEKGHWASSCSQPDTRTEAERTRQAKPDDKCHRCGELGHFAKD 214
Query: 93 CPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
C C C Q GH A+ECP + + +D L Y+
Sbjct: 215 CSLPPDNTCRICKQEGHFARECPNKDTAAAAN--MDADLDNYM 255
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 64/199 (32%), Gaps = 67/199 (33%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE------------- 55
C NC GHY +C Q +A G + C +C GH+A EC+
Sbjct: 27 CRNCGQLGHYARNCAQ--NAGLNGGRGADRCNRCGQIGHWASECSLPYSGGAGAGGFRGA 84
Query: 56 --------SVTCYNCSGQGHVAKDCTVKSSI-----------ICYNCNSSGHFARNCPND 96
C C G GH A+ C + C+NC GH AR+C
Sbjct: 85 VGGGGARPGDRCSRCGGLGHYARACPSPAMAAFAGGAGGAPKTCHNCGRVGHIARDCRQG 144
Query: 97 SSKR-------------------CYACHQAGHMAKECPGQTAGKSPEPVVDMSLT----- 132
R C C + GH A C P+ + T
Sbjct: 145 GGARGYDNARAPKQRKGAGPDDVCNRCGEKGHWASSC------SQPDTRTEAERTRQAKP 198
Query: 133 ---CYVCGHQGHLSYDCKL 148
C+ CG GH + DC L
Sbjct: 199 DDKCHRCGELGHFAKDCSL 217
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 57/152 (37%), Gaps = 55/152 (36%)
Query: 39 CYKCNNYGHFARECATESV------------TCYNCSGQGHVAKDCT------------- 73
C +C GH+AR C + ++ TC+NC GH+A+DC
Sbjct: 96 CSRCGGLGHYARACPSPAMAAFAGGAGGAPKTCHNCGRVGHIARDCRQGGGARGYDNARA 155
Query: 74 ------VKSSIICYNCNSSGHFARNCPNDSSK-------------RCYACHQAGHMAKEC 114
+C C GH+A +C ++ +C+ C + GH AK+C
Sbjct: 156 PKQRKGAGPDDVCNRCGEKGHWASSCSQPDTRTEAERTRQAKPDDKCHRCGELGHFAKDC 215
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ TC +C +GH + +C
Sbjct: 216 -----------SLPPDNTCRICKQEGHFAREC 236
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 59/168 (35%), Gaps = 59/168 (35%)
Query: 32 GDKVGIVCYKCNNYGHFARECATE--------SVTCYNCSGQGHVAKDCTVKSSII---- 79
G + C C GH+AR CA + C C GH A +C++ S
Sbjct: 20 GAQANDACRNCGQLGHYARNCAQNAGLNGGRGADRCNRCGQIGHWASECSLPYSGGAGAG 79
Query: 80 ----------------CYNCNSSGHFARNCPND-----------SSKRCYACHQAGHMAK 112
C C GH+AR CP+ + K C+ C + GH+A+
Sbjct: 80 GFRGAVGGGGARPGDRCSRCGGLGHYARACPSPAMAAFAGGAGGAPKTCHNCGRVGHIAR 139
Query: 113 EC--------------PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+C P Q G P+ V C CG +GH + C
Sbjct: 140 DCRQGGGARGYDNARAPKQRKGAGPDDV------CNRCGEKGHWASSC 181
>gi|326370780|gb|ADZ56545.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ ++ C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 385 RKTVKCFNCGKEGHIARNCKAPRRKGCWKCGQEGHQMKDCTGRQA 429
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMA 111
++V C+NC +GH+A++C C+ C GH ++C + + + H+
Sbjct: 386 KTVKCFNCGKEGHIARNCKAPRRKGCWKCGQEGHQMKDCTGRQANFLGKIWPSHKGR--- 442
Query: 112 KECPGQTAGKSPEP 125
PG PEP
Sbjct: 443 ---PGNFLQSRPEP 453
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
+ C+ C GH AR C A C+ C +GH KDCT
Sbjct: 388 VKCFNCGKEGHIARNCKAPRRKGCWKCGQEGHQMKDCT 425
>gi|294805669|gb|ADF42563.1| gag protein [Simian immunodeficiency virus]
Length = 544
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
+ CYNC GHV KDC ++ C+ C +GH A+NCP
Sbjct: 426 IRCYNCGQIGHVQKDCRKPRTVRCFKCQQTGHMAKNCP 463
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 23/38 (60%)
Query: 78 IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
I CYNC GH ++C + RC+ C Q GHMAK CP
Sbjct: 426 IRCYNCGQIGHVQKDCRKPRTVRCFKCQQTGHMAKNCP 463
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
I CY C GH ++C +V C+ C GH+AK+C
Sbjct: 426 IRCYNCGQIGHVQKDCRKPRTVRCFKCQQTGHMAKNC 462
Score = 40.0 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 9/46 (19%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC 52
I+CYNC GH Q C + + + C+KC GH A+ C
Sbjct: 426 IRCYNCGQIGHVQKDCRKPRT---------VRCFKCQQTGHMAKNC 462
>gi|166026130|gb|ABY78375.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ + C+NC GH ARNC K C+ C GH K+CPG+ A
Sbjct: 389 RKXVKCFNCGKEGHIARNCRAPRKKGCWKCGNEGHQMKDCPGRQA 433
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMA 111
+ V C+NC +GH+A++C C+ C + GH ++CP + + + H+
Sbjct: 390 KXVKCFNCGKEGHIARNCRAPRKKGCWKCGNEGHQMKDCPGRQANFLGKIWPSHKGR--- 446
Query: 112 KECPGQTAGKSPEP 125
PG PEP
Sbjct: 447 ---PGNFLQSRPEP 457
Score = 40.0 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
+ C+ C GH AR C A C+ C +GH KDC
Sbjct: 392 VKCFNCGKEGHIARNCRAPRKKGCWKCGNEGHQMKDC 428
>gi|340939584|gb|EGS20206.1| hypothetical protein CTHT_0047210 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 156
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Query: 15 FGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKD--C 72
GH Q CP + G CY C+ GH AR C + +G+ A
Sbjct: 20 LGHVQAECP---TLRLGGAAAANRCYNCDQPGHLARNCPNPPINRGPVAGRPGFAPGRFA 76
Query: 73 TVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
CY C HFAR+C + +CYAC + GH++++C
Sbjct: 77 NGGRPATCYKCGGPNHFARDC-QAQAMKCYACGKLGHISRDC 117
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 17/96 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVG---------------IVCYKCNNYGHFAREC 52
+CYNC GH +CP RG G CYKC HFAR+C
Sbjct: 40 RCYNCDQPGHLARNCPNPPIN--RGPVAGRPGFAPGRFANGGRPATCYKCGGPNHFARDC 97
Query: 53 ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGH 88
+++ CY C GH+++DCT + N G
Sbjct: 98 QAQAMKCYACGKLGHISRDCTAPNGGPLNTPNGEGQ 133
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 43/111 (38%), Gaps = 40/111 (36%)
Query: 64 GQGHVAKDCTV------KSSIICYNCNSSGHFARNCPNDSSKR----------------- 100
G GHV +C ++ CYNC+ GH ARNCPN R
Sbjct: 19 GLGHVQAECPTLRLGGAAAANRCYNCDQPGHLARNCPNPPINRGPVAGRPGFAPGRFANG 78
Query: 101 -----CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C H A++C Q ++ CY CG GH+S DC
Sbjct: 79 GRPATCYKCGGPNHFARDCQAQ------------AMKCYACGKLGHISRDC 117
>gi|37728001|gb|AAR02367.1| gag protein [Simian immunodeficiency virus]
Length = 509
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
CYNC GH AR+CP +K+C+ C + GH+A++C
Sbjct: 399 CYNCGQYGHVARDCPKPRNKKCFKCGREGHLARQC 433
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK 99
CYNC GHVA+DC + C+ C GH AR C +D++K
Sbjct: 399 CYNCGQYGHVARDCPKPRNKKCFKCGREGHLARQCRSDNTK 439
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 11/53 (20%)
Query: 95 NDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
N + RCY C Q GH+A++CP K C+ CG +GHL+ C+
Sbjct: 393 NRGNPRCYNCGQYGHVARDCPKPRNKK-----------CFKCGREGHLARQCR 434
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 9/57 (15%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSG 64
+CYNC +GH CP+ R K C+KC GH AR+C +++ N G
Sbjct: 398 RCYNCGQYGHVARDCPK-----PRNKK----CFKCGREGHLARQCRSDNTKAVNFLG 445
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 30 ARGDKVGIVCYKCNNYGHFARECAT-ESVTCYNCSGQGHVAKDC 72
++G++ CY C YGH AR+C + C+ C +GH+A+ C
Sbjct: 390 SQGNRGNPRCYNCGQYGHVARDCPKPRNKKCFKCGREGHLARQC 433
>gi|255986910|gb|ACU50837.1| gag protein [Human immunodeficiency virus 1]
Length = 506
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 23/39 (58%)
Query: 81 YNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+NC GH ARNC K C+ C Q GH KECPG+ A
Sbjct: 395 FNCGKDGHIARNCRAPRKKGCWKCGQEGHQMKECPGRQA 433
Score = 39.3 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 60 YNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
+NC GH+A++C C+ C GH + CP
Sbjct: 395 FNCGKDGHIARNCRAPRKKGCWKCGQEGHQMKECP 429
>gi|389748608|gb|EIM89785.1| hypothetical protein STEHIDRAFT_153628 [Stereum hirsutum FP-91666
SS1]
Length = 716
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 16/97 (16%)
Query: 64 GQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR----CYACHQAGHMAKEC----- 114
GQG K +C C S+ HF +CP S C C+ AGH+ ++C
Sbjct: 366 GQGQNGKP---PPGYVCKRCESTDHFINDCPERSKPPEGYICKICNTAGHLVRDCPTRHN 422
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
PG T G+ P C CG + H DC ++ +
Sbjct: 423 PGDTGGRKPRE----GYVCRACGSEAHYIEDCPVISE 455
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 17/82 (20%)
Query: 36 GIVCYKCNNYGHFARECAT-----ESVTCYNCSGQGHVAKDCTVKSS------------I 78
G VC +C + HF +C E C C+ GH+ +DC + +
Sbjct: 376 GYVCKRCESTDHFINDCPERSKPPEGYICKICNTAGHLVRDCPTRHNPGDTGGRKPREGY 435
Query: 79 ICYNCNSSGHFARNCPNDSSKR 100
+C C S H+ +CP S +R
Sbjct: 436 VCRACGSEAHYIEDCPVISERR 457
>gi|164418722|gb|ABY54666.1| gag protein [Human immunodeficiency virus 1]
Length = 473
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 29/61 (47%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQT 118
C G H AK K + C+NC GH ARNC K C+ C + GH K+C +
Sbjct: 344 CQGVGGPSHKAKFKGSKRIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCTERQ 403
Query: 119 A 119
A
Sbjct: 404 A 404
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
A +G K + C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 354 AKFKGSKRIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCTERQA 404
Score = 42.4 bits (98), Expect = 0.070, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
V C+NC +GH+A++C C+ C GH ++C
Sbjct: 363 VKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDC 399
>gi|213138146|gb|ACJ44744.1| gag protein [Human immunodeficiency virus 1]
Length = 490
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 35/81 (43%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A N S +K + +I C+NC GH ARNC
Sbjct: 347 CQGVGGPGHKARVLAEAMSQVQNTSIMMQKSKFQGARRTIKCFNCGKEGHLARNCRAPRK 406
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C + GH K+C + A
Sbjct: 407 KGCWKCGKEGHQMKDCTERQA 427
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
+G + I C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 380 QGARRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 427
>gi|5059041|gb|AAD38881.1|AF119819_1 gag polyprotein [Human immunodeficiency virus 1]
Length = 498
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ SI C+NC GH ARNC K C+ C + GH K+CP + A
Sbjct: 386 RRSIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCPERQA 430
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
S+ C+NC +GH+A++C C+ C GH ++CP
Sbjct: 388 SIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCP 426
Score = 42.7 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 24 QKSSADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
QKS + +G + I C+ C GH AR C A C+ C +GH KDC
Sbjct: 378 QKS--NFKGPRRSIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDC 425
>gi|158931135|sp|P17283.2|POL_SIVCZ RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Nucleocapsid protein p7;
Short=NC; Contains: RecName: Full=p6-pol; Short=p6*;
Contains: RecName: Full=Protease; AltName: Full=PR;
AltName: Full=Retropepsin; Contains: RecName:
Full=Reverse transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1384
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
K I C+NC GH ARNC K C+ C Q GH K+C G+
Sbjct: 338 KRKIKCFNCGKEGHLARNCKAPRRKGCWRCGQEGHQMKDCTGR 380
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 32 GDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
G K I C+ C GH AR C A C+ C +GH KDCT
Sbjct: 336 GPKRKIKCFNCGKEGHLARNCKAPRRKGCWRCGQEGHQMKDCT 378
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
+ C+NC +GH+A++C C+ C GH ++C
Sbjct: 341 IKCFNCGKEGHLARNCKAPRRKGCWRCGQEGHQMKDC 377
>gi|449542696|gb|EMD33674.1| hypothetical protein CERSUDRAFT_159922 [Ceriporiopsis subvermispora
B]
Length = 335
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 56/125 (44%), Gaps = 15/125 (12%)
Query: 37 IVCYKCNNYGHFARECATESVTCYN-CSGQGHVAKDCTVKSSI-ICYNCNSSGHFARNC- 93
+C+ C GH AR+C T + GQG A+ +S++ ICY C S H C
Sbjct: 140 TICFACREKGHTARDCTTFIAPATDGAEGQGGGARAKPGRSAVGICYRCGSWRHNLSKCR 199
Query: 94 -PNDSSK-----RCYACHQAGHMAKECP-GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
P D C+ C GH+A CP Q+ G P +C +CG HL+ DC
Sbjct: 200 EPVDPENPLPYASCFVCSGQGHLASSCPKNQSKGIYPN-----GGSCKLCGETTHLAKDC 254
Query: 147 KLVQK 151
L +K
Sbjct: 255 PLRKK 259
>gi|282598114|gb|ADA83346.1| gag protein [Human immunodeficiency virus 1]
Length = 489
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A E+++ +G + + +I C+NC GH ARNC
Sbjct: 344 CQGVGGPGHKARVLA-EAMSQVQQAGVMMQRSNFRGQRTIKCFNCGKEGHLARNCKAPRK 402
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C + GH K+CP + A
Sbjct: 403 KGCWKCGKEGHQMKDCPERQA 423
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
++ RG + I C+ C GH AR C A C+ C +GH KDC
Sbjct: 374 SNFRGQRT-IKCFNCGKEGHLARNCKAPRKKGCWKCGKEGHQMKDC 418
>gi|255739693|gb|ACU31784.1| gag protein [Human immunodeficiency virus 1]
Length = 504
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K SI C+NC GH ARNC K C+ C Q GH K+C + A
Sbjct: 383 KRSIKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKDCTERQA 427
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
+G K I C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 380 KGPKRSIKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKDCTERQA 427
>gi|242076730|ref|XP_002448301.1| hypothetical protein SORBIDRAFT_06g024880 [Sorghum bicolor]
gi|241939484|gb|EES12629.1| hypothetical protein SORBIDRAFT_06g024880 [Sorghum bicolor]
Length = 275
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 53/130 (40%), Gaps = 20/130 (15%)
Query: 32 GDKVGIVCYKCNNYGHFARECATESV-----TCYNCSGQGHVAKDCTVKSS----IICYN 82
G + G C+ C + H A+ C +++ C C +GH K+C KS CYN
Sbjct: 63 GMRPGERCFICKSTDHVAKACPEKALWDKNKICLLCRERGHSLKNCPDKSEGNLKKFCYN 122
Query: 83 CNSSGHFARNCPNDSSK------RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVC 136
C SGH CP C+ C Q GH++K CP G + C C
Sbjct: 123 CGESGHSLSKCPKPIENGGTNFASCFICKQQGHLSKNCPENKHG-----IYPKGGCCKEC 177
Query: 137 GHQGHLSYDC 146
G HL+ C
Sbjct: 178 GEVTHLARHC 187
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 18/100 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-------ATESVTCYN 61
C C + GH +CP KS + + CY C GH +C T +C+
Sbjct: 95 CLLCRERGHSLKNCPDKSEGNLK-----KFCYNCGESGHSLSKCPKPIENGGTNFASCFI 149
Query: 62 CSGQGHVAKDCTVKSSII------CYNCNSSGHFARNCPN 95
C QGH++K+C I C C H AR+CPN
Sbjct: 150 CKQQGHLSKNCPENKHGIYPKGGCCKECGEVTHLARHCPN 189
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 48/125 (38%), Gaps = 22/125 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT-----CYNC 62
+C+ C H +CP+K+ D +C C GH + C +S CYNC
Sbjct: 69 RCFICKSTDHVAKACPEKALWDKN-----KICLLCRERGHSLKNCPDKSEGNLKKFCYNC 123
Query: 63 SGQGHVAKDCTVKSS------IICYNCNSSGHFARNCPNDSSKR------CYACHQAGHM 110
GH C C+ C GH ++NCP + C C + H+
Sbjct: 124 GESGHSLSKCPKPIENGGTNFASCFICKQQGHLSKNCPENKHGIYPKGGCCKECGEVTHL 183
Query: 111 AKECP 115
A+ CP
Sbjct: 184 ARHCP 188
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 24/104 (23%)
Query: 67 HVAKDCTVKSSIICYNCNSSGHFARNCPN----DSSKRCYACHQAGHMAKECPGQTAG-- 120
H + ++ C+ C S+ H A+ CP D +K C C + GH K CP ++ G
Sbjct: 57 HPLRVPGMRPGERCFICKSTDHVAKACPEKALWDKNKICLLCRERGHSLKNCPDKSEGNL 116
Query: 121 ---------------KSPEPVVDMSL---TCYVCGHQGHLSYDC 146
K P+P+ + +C++C QGHLS +C
Sbjct: 117 KKFCYNCGESGHSLSKCPKPIENGGTNFASCFICKQQGHLSKNC 160
>gi|166026240|gb|ABY78430.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ + C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 389 RKXVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQA 433
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
+ V C+NC +GH+A++C C+ C GH ++C + ++ + +K
Sbjct: 390 KXVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDC---TGRQANFLGKIWPSSKGR 446
Query: 115 PGQTAGKSPEP 125
PG PEP
Sbjct: 447 PGNFLQSRPEP 457
Score = 42.4 bits (98), Expect = 0.072, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
R + + C+ C GH AR C A C+ C +GH KDCT
Sbjct: 386 RNPRKXVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCT 429
>gi|384365682|gb|AFH76568.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
V C+NC +GH+AK+C C+ C GH ++CPN+ H + PG
Sbjct: 392 VKCFNCGKEGHIAKNCRAPRKRGCWKCGKDGHQMKDCPNEKQANFLGKIWPSHKGR--PG 449
Query: 117 QTAGKSPEP 125
PEP
Sbjct: 450 NFLQSRPEP 458
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
+ C+ C GH A+ C A C+ C GH KDC
Sbjct: 392 VKCFNCGKEGHIAKNCRAPRKRGCWKCGKDGHQMKDC 428
>gi|1150852|gb|AAB47723.1| Gag protein [Simian immunodeficiency virus]
Length = 522
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 24/47 (51%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGK 121
K + C+NC GH ARNC K C+ C Q GH K CP GK
Sbjct: 409 KRPLKCFNCGKEGHTARNCKAPRRKGCWRCGQEGHQLKNCPATNTGK 455
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
+ C+NC +GH A++C C+ C GH +NCP
Sbjct: 412 LKCFNCGKEGHTARNCKAPRRKGCWRCGQEGHQLKNCP 449
Score = 38.9 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
RG K + C+ C GH AR C A C+ C +GH K+C ++
Sbjct: 406 RGGKRPLKCFNCGKEGHTARNCKAPRRKGCWRCGQEGHQLKNCPATNT 453
>gi|326513731|dbj|BAJ87884.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 59/152 (38%), Gaps = 46/152 (30%)
Query: 9 CYNCFDFGHYQYSCPQK--------------SSADARGDKVGIV---------------- 38
C+ C + GHY + CPQK SS A + V
Sbjct: 326 CFTCHEEGHYAHMCPQKFGAISGNTSKEVEESSTIATSSNMSKVLEEQDPCTAKQSSEMK 385
Query: 39 ------CYKCNNYGHFARECATESVTCYNCSGQGHVAKDC-TVKSS--------IICYNC 83
C C GH + C T +T Y C+ + H AK+ T K S + C +C
Sbjct: 386 PALVVRCVGCGKEGHRRKRCPTRVLTWYKCNEEVHAAKNSPTTKQSSEMKPTSVVRCVSC 445
Query: 84 NSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
GH AR+CP C C++ GH AK+CP
Sbjct: 446 GQEGHRARSCPTRVFI-CSTCNEEGHKAKKCP 476
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 21/110 (19%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES---- 56
M ++C C GH + CP + + YKCN H A+ T
Sbjct: 384 MKPALVVRCVGCGKEGHRRKRCPTRV----------LTWYKCNEEVHAAKNSPTTKQSSE 433
Query: 57 ------VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR 100
V C +C +GH A+ C + IC CN GH A+ CP KR
Sbjct: 434 MKPTSVVRCVSCGQEGHRARSCPTRV-FICSTCNEEGHKAKKCPQKRQKR 482
>gi|255082336|ref|XP_002504154.1| predicted protein [Micromonas sp. RCC299]
gi|226519422|gb|ACO65412.1| predicted protein [Micromonas sp. RCC299]
Length = 1226
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 80 CYNCNSSGHFARNCPNDSSKR-CYACHQAGHMAKECPGQTAGKSPEPV 126
C+ C GHFAR+CP+ R C C + GH+A++CP G P PV
Sbjct: 146 CHRCGGVGHFARDCPSSRDNRTCRVCGEVGHIARDCPMNRQG-GPPPV 192
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 36 GIVCYKCNNYGHFARECAT--ESVTCYNCSGQGHVAKDC 72
G C++C GHFAR+C + ++ TC C GH+A+DC
Sbjct: 143 GKTCHRCGGVGHFARDCPSSRDNRTCRVCGEVGHIARDC 181
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 10/55 (18%)
Query: 94 PNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
P K C+ C GH A++CP + TC VCG GH++ DC +
Sbjct: 139 PRMQGKTCHRCGGVGHFARDCPSSRDNR----------TCRVCGEVGHIARDCPM 183
>gi|294860947|gb|ADF45367.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ ++ C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 389 RKTVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTGRQA 433
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMA 111
++V C+NC +GH+A++C C+ C GH ++C + + + H+
Sbjct: 390 KTVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTGRQANFLGKIWPSHKGR--- 446
Query: 112 KECPGQTAGKSPEP 125
PG PEP
Sbjct: 447 ---PGNFLQSRPEP 457
Score = 42.0 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
R + + C+ C GH AR C A C+ C +GH KDCT
Sbjct: 386 RDQRKTVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCT 429
>gi|297815424|ref|XP_002875595.1| zinc knuckle family protein [Arabidopsis lyrata subsp. lyrata]
gi|297321433|gb|EFH51854.1| zinc knuckle family protein [Arabidopsis lyrata subsp. lyrata]
Length = 337
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 42/100 (42%), Gaps = 34/100 (34%)
Query: 28 ADARG---DKVGIVCYKCNNYGHFARECATESVT----------------CYNCSGQGHV 68
+D RG K G CYKC GH+AR+C +S CY C QGH
Sbjct: 221 SDTRGYQTAKTGAPCYKCGKEGHWARDCTAQSGNPTYEAGQVKSSSSSGECYKCGKQGHW 280
Query: 69 AKDCTVKSSII---------------CYNCNSSGHFARNC 93
AKDCT +S CY C GH+AR+C
Sbjct: 281 AKDCTGQSGDPQFQSRQAKSTTSGGDCYKCGKPGHWARDC 320
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 60/145 (41%), Gaps = 30/145 (20%)
Query: 32 GDKVGIVCYKCNNY----GHFA--RECATESVTCYNCSGQGHVAKD-----CTVKSSIIC 80
G+ VG Y+C + G F + A S T Y+ + ++ T K+ C
Sbjct: 176 GENVGRQFYRCPVFEGSCGFFKWCNDNAVSSPTSYSVTKNSNLGDSDTRGYQTAKTGAPC 235
Query: 81 YNCNSSGHFARNCP---------------NDSSKRCYACHQAGHMAKECPGQTAGKSPEP 125
Y C GH+AR+C + SS CY C + GH AK+C GQ+ +
Sbjct: 236 YKCGKEGHWARDCTAQSGNPTYEAGQVKSSSSSGECYKCGKQGHWAKDCTGQSGDPQFQS 295
Query: 126 VVDMSLT----CYVCGHQGHLSYDC 146
S T CY CG GH + DC
Sbjct: 296 RQAKSTTSGGDCYKCGKPGHWARDC 320
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 2 SSTSTIQCYNCFDFGHYQYSC------PQKSSADARGDKVGIVCYKCNNYGHFARECATE 55
SS+S+ +CY C GH+ C PQ S A+ G CYKC GH+AR+C +
Sbjct: 264 SSSSSGECYKCGKQGHWAKDCTGQSGDPQFQSRQAKSTTSGGDCYKCGKPGHWARDCTSA 323
Query: 56 SVT 58
+ T
Sbjct: 324 AQT 326
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 22/87 (25%)
Query: 9 CYNCFDFGHYQYSC------PQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---- 58
CY C GH+ C P + + CYKC GH+A++C +S
Sbjct: 235 CYKCGKEGHWARDCTAQSGNPTYEAGQVKSSSSSGECYKCGKQGHWAKDCTGQSGDPQFQ 294
Query: 59 ------------CYNCSGQGHVAKDCT 73
CY C GH A+DCT
Sbjct: 295 SRQAKSTTSGGDCYKCGKPGHWARDCT 321
>gi|222428408|gb|ACM50056.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
++V C+NC +GH+AK+C C+ C GH R+C N+ H KE
Sbjct: 390 KTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMRDCNNERQANFLGKIWPSH--KER 447
Query: 115 PGQTAGKSPEP 125
PG PEP
Sbjct: 448 PGNFLQSRPEP 458
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
+ ++ C+NC GH A+NC K C+ C + GH ++C
Sbjct: 389 RKTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMRDC 428
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
RG + + C+ C GH A+ C A C+ C +GH +DC
Sbjct: 386 RGPRKTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMRDC 428
>gi|451168193|gb|AGF30905.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 387 CFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQA 426
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 53 ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGH 109
A V C+NC +GH+A++C C+ C GH ++C + + + H+
Sbjct: 381 ARRIVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQANFLGKIWPSHKGR- 439
Query: 110 MAKECPGQTAGKSPEP 125
PG PEP
Sbjct: 440 -----PGNFLQSRPEP 450
Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
++ +G + + C+ C GH AR C A C+ C +GH KDCT
Sbjct: 376 SNFKGARRIVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCT 422
>gi|451168187|gb|AGF30900.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 387 CFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQA 426
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 53 ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGH 109
A V C+NC +GH+A++C C+ C GH ++C + + + H+
Sbjct: 381 ARRIVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQANFLGKIWPSHKGR- 439
Query: 110 MAKECPGQTAGKSPEP 125
PG PEP
Sbjct: 440 -----PGNFLQSRPEP 450
Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
++ +G + + C+ C GH AR C A C+ C +GH KDCT
Sbjct: 376 SNFKGARRIVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCT 422
>gi|451168139|gb|AGF30860.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 387 CFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQA 426
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 53 ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGH 109
A V C+NC +GH+A++C C+ C GH ++C + + + H+
Sbjct: 381 ARRIVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQANFLGKIWPSHKGR- 439
Query: 110 MAKECPGQTAGKSPEP 125
PG PEP
Sbjct: 440 -----PGNFLQSRPEP 450
Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
++ +G + + C+ C GH AR C A C+ C +GH KDCT
Sbjct: 376 SNFKGARRIVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCT 422
>gi|451168133|gb|AGF30855.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 387 CFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQA 426
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 53 ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGH 109
A V C+NC +GH+A++C C+ C GH ++C + + + H+
Sbjct: 381 ARRIVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQANFLGKIWPSHKGR- 439
Query: 110 MAKECPGQTAGKSPEP 125
PG PEP
Sbjct: 440 -----PGNFLQSRPEP 450
Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
++ +G + + C+ C GH AR C A C+ C +GH KDCT
Sbjct: 376 SNFKGARRIVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCT 422
>gi|451168104|gb|AGF30831.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 387 CFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQA 426
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 53 ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGH 109
A + V C+NC +GH+A++C C+ C GH ++C + + + H+
Sbjct: 381 ARKIVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQANFLGKIWPSHKGR- 439
Query: 110 MAKECPGQTAGKSPEP 125
PG PEP
Sbjct: 440 -----PGNFLQSRPEP 450
Score = 42.7 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
++ +G + + C+ C GH AR C A C+ C +GH KDCT
Sbjct: 376 SNFKGARKIVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCT 422
>gi|451168090|gb|AGF30820.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 387 CFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQA 426
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 53 ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGH 109
A V C+NC +GH+A++C C+ C GH ++C + + + H+
Sbjct: 381 ARRIVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQANFLGKIWPSHKGR- 439
Query: 110 MAKECPGQTAGKSPEP 125
PG PEP
Sbjct: 440 -----PGNFLQSRPEP 450
Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
++ +G + + C+ C GH AR C A C+ C +GH KDCT
Sbjct: 376 SNFKGARRIVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCT 422
>gi|451168061|gb|AGF30796.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 387 CFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQA 426
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 53 ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGH 109
A V C+NC +GH+A++C C+ C GH ++C + + + H+
Sbjct: 381 ARRIVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQANFLGKIWPSHKGR- 439
Query: 110 MAKECPGQTAGKSPEP 125
PG PEP
Sbjct: 440 -----PGNFLQSRPEP 450
Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
++ +G + + C+ C GH AR C A C+ C +GH KDCT
Sbjct: 376 SNFKGARRIVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCT 422
>gi|451168049|gb|AGF30786.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 387 CFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQA 426
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 53 ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGH 109
A V C+NC +GH+A++C C+ C GH ++C + + + H+
Sbjct: 381 ARRIVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQANFLGKIWPSHKGR- 439
Query: 110 MAKECPGQTAGKSPEP 125
PG PEP
Sbjct: 440 -----PGNFLQSRPEP 450
Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
++ +G + + C+ C GH AR C A C+ C +GH KDCT
Sbjct: 376 SNFKGARRIVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCT 422
>gi|451168031|gb|AGF30771.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 387 CFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQA 426
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Query: 53 ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGH 109
A V C+NC +GH+A++C C+ C GH ++C + + + H+
Sbjct: 381 ARRIVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQANFLGKIWPSHKGR- 439
Query: 110 MAKECPGQTAGKSPEP 125
PG PEP
Sbjct: 440 -----PGNFLQSRPEP 450
Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
++ +G + + C+ C GH AR C A C+ C +GH KDCT
Sbjct: 376 SNFKGARRIVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCT 422
>gi|325635398|gb|ADZ33264.1| gag protein [Human immunodeficiency virus 1]
Length = 501
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ ++ C+NC GH A+NC K C+ C + GH K CPG+ A
Sbjct: 385 RRTVKCFNCGKEGHIAKNCRAPRKKGCWKCGEEGHQMKNCPGRQA 429
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQA--GHM 110
+V C+NC +GH+AK+C C+ C GH +NCP + + + H+ G+
Sbjct: 387 TVKCFNCGKEGHIAKNCRAPRKKGCWKCGEEGHQMKNCPGRQANFLGKVWPSHKGRPGNF 446
Query: 111 AKECPGQTAGKSP 123
+ P TA +P
Sbjct: 447 LQSRPEPTAPSAP 459
>gi|325635350|gb|ADZ33222.1| gag protein [Human immunodeficiency virus 1]
gi|325635358|gb|ADZ33229.1| gag protein [Human immunodeficiency virus 1]
gi|325635366|gb|ADZ33236.1| gag protein [Human immunodeficiency virus 1]
gi|325635374|gb|ADZ33243.1| gag protein [Human immunodeficiency virus 1]
gi|325635382|gb|ADZ33250.1| gag protein [Human immunodeficiency virus 1]
gi|325635390|gb|ADZ33257.1| gag protein [Human immunodeficiency virus 1]
gi|325635406|gb|ADZ33271.1| gag protein [Human immunodeficiency virus 1]
gi|325635414|gb|ADZ33278.1| gag protein [Human immunodeficiency virus 1]
Length = 501
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ ++ C+NC GH A+NC K C+ C + GH K CPG+ A
Sbjct: 385 RRTVKCFNCGKEGHIAKNCRAPRKKGCWKCGEEGHQMKNCPGRQA 429
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQA--GHM 110
+V C+NC +GH+AK+C C+ C GH +NCP + + + H+ G+
Sbjct: 387 TVKCFNCGKEGHIAKNCRAPRKKGCWKCGEEGHQMKNCPGRQANFLGKVWPSHKGRPGNF 446
Query: 111 AKECPGQTAGKSP 123
+ P TA +P
Sbjct: 447 LQSRPEPTAPSAP 459
>gi|325635342|gb|ADZ33215.1| gag protein [Human immunodeficiency virus 1]
Length = 501
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ ++ C+NC GH A+NC K C+ C + GH K CPG+ A
Sbjct: 385 RRTVKCFNCGKEGHIAKNCRAPRKKGCWKCGEEGHQMKNCPGRQA 429
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQA--GHM 110
+V C+NC +GH+AK+C C+ C GH +NCP + + + H+ G+
Sbjct: 387 TVKCFNCGKEGHIAKNCRAPRKKGCWKCGEEGHQMKNCPGRQANFLGKVWPSHKGRPGNF 446
Query: 111 AKECPGQTAGKSP 123
+ P TA +P
Sbjct: 447 LQSRPEPTAPSAP 459
>gi|213138316|gb|ACJ44821.1| gag protein [Human immunodeficiency virus 1]
Length = 493
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 17/70 (24%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC-----------------PGQ 117
K SI C+NC GH ARNC K C+ C + GH K+C PG
Sbjct: 382 KRSIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSKGRPGN 441
Query: 118 TAGKSPEPVV 127
PEP V
Sbjct: 442 FLQNRPEPTV 451
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K I C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 376 SNFKGPKRSIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 426
>gi|170093301|ref|XP_001877872.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647731|gb|EDR11975.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 133
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 24/131 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT--------CY 60
C+ C + GH +CP+ ++ D +G VGI CY+C + H C + T C+
Sbjct: 18 CFACREKGHAAKNCPKATTEDGKGKSVGI-CYRCGSTRHTLSRCKKPADTENPMPFASCF 76
Query: 61 NCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAG 120
CSG+GH+A C + Y PN C C H+AK+C + G
Sbjct: 77 VCSGKGHLASACPQNKAKGVY------------PNGGC--CKICGDTAHLAKDCGLRREG 122
Query: 121 KSPEPVVDMSL 131
+ P++D++
Sbjct: 123 -TQSPLIDLNF 132
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 19/110 (17%)
Query: 57 VTCYNCSGQGHVAKDCTV--------KSSIICYNCNSSGHFARNC--PNDSSK-----RC 101
TC+ C +GH AK+C KS ICY C S+ H C P D+ C
Sbjct: 16 TTCFACREKGHAAKNCPKATTEDGKGKSVGICYRCGSTRHTLSRCKKPADTENPMPFASC 75
Query: 102 YACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
+ C GH+A CP A + V C +CG HL+ DC L ++
Sbjct: 76 FVCSGKGHLASACPQNKA----KGVYPNGGCCKICGDTAHLAKDCGLRRE 121
>gi|255986724|gb|ACU50744.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 33/76 (43%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A N + + + + +I C+NC GH ARNC
Sbjct: 350 CQGVGGPGHKARILAEAMSQVTNSANTTIMMQKGNFRKTIKCFNCGKEGHLARNCRAPRK 409
Query: 99 KRCYACHQAGHMAKEC 114
K C+ C + GH K+C
Sbjct: 410 KGCWKCGKEGHQMKDC 425
Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
I C+ C GH AR C A C+ C +GH KDCT
Sbjct: 389 IKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCT 426
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 22/98 (22%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSS-----GHFARNCPNDSSKRCYACHQAGHMAKE 113
C G GH A+ S + + N++ G+F + +C+ C + GH+A+
Sbjct: 350 CQGVGGPGHKARILAEAMSQVTNSANTTIMMQKGNFRKTI------KCFNCGKEGHLARN 403
Query: 114 CPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
C ++P C+ CG +GH DC Q+
Sbjct: 404 C------RAPR-----KKGCWKCGKEGHQMKDCTERQR 430
>gi|451854232|gb|EMD67525.1| hypothetical protein COCSADRAFT_47048, partial [Cochliobolus
sativus ND90Pr]
Length = 112
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 39/139 (28%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGH 67
+C+ C + H CP + C+ C+ GH+A++C E C C GH
Sbjct: 13 ECWACGELYHKSDDCPNR-------------CWTCDEVGHYAKDCPNE---CDACGDIGH 56
Query: 68 VAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVV 127
DC C+ C GH AR+C ++ C+ C + GH ++C G+
Sbjct: 57 STVDC----PDACWTCGELGHLARDCEDE----CFVCGRLGHDTQKCKGK---------- 98
Query: 128 DMSLTCYVCGHQGHLSYDC 146
C+ CG GH DC
Sbjct: 99 -----CHKCGKIGHWKRDC 112
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 44 NYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYA 103
GH +C E C+ C H + DC + C+ C+ GH+A++CPN+ C A
Sbjct: 2 ELGHTLSKCPNE---CWACGELYHKSDDCPNR----CWTCDEVGHYAKDCPNE----CDA 50
Query: 104 CHQAGHMAKECPG--QTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
C GH +CP T G+ D C+VCG GH + CK
Sbjct: 51 CGDIGHSTVDCPDACWTCGELGHLARDCEDECFVCGRLGHDTQKCK 96
>gi|440299019|gb|ELP91631.1| zinc finger protein cchc domain containing protein, putative
[Entamoeba invadens IP1]
Length = 183
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 14/103 (13%)
Query: 53 ATESVTCYNCSGQGHVAKDCTVK----SSIICYNCNSSGHFARNCPNDSSKR-----CYA 103
E CY C GH K+C + + +C+NC GH CP +R C+
Sbjct: 53 PKERTQCYRCGKLGHSLKNCPLNKGKDAEQVCFNCGMPGHILAKCPVPRKRRLEFTSCFL 112
Query: 104 CHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C + GH++ CP ++P+ + C VCG HL DC
Sbjct: 113 CGKTGHLSNMCP-----ENPKGIYSKGGCCRVCGSIHHLERDC 150
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 39/108 (36%), Gaps = 17/108 (15%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT------ESVT 58
QCY C GH +CP DA VC+ C GH +C E +
Sbjct: 55 ERTQCYRCGKLGHSLKNCPLNKGKDAEQ-----VCFNCGMPGHILAKCPVPRKRRLEFTS 109
Query: 59 CYNCSGQGHVAKDCTVKSSII------CYNCNSSGHFARNCPNDSSKR 100
C+ C GH++ C I C C S H R+CP R
Sbjct: 110 CFLCGKTGHLSNMCPENPKGIYSKGGCCRVCGSIHHLERDCPKKKEMR 157
>gi|164606274|gb|ABY62286.1| gag protein [Human immunodeficiency virus 1]
gi|441468849|gb|AGC36779.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 35/81 (43%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A + N + + K +I CYNC GH ARNC
Sbjct: 348 CQGVGGPGHKARVLAEATSQVNNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNCRAPRK 407
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C + GH K+C + A
Sbjct: 408 KGCWKCGKEGHQMKDCTERQA 428
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K I CY C GH AR C A C+ C +GH KDCT + +
Sbjct: 378 SNFKGTKRTIKCYNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 428
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 18/91 (19%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECP 115
C G GH A+ +S + N++ + +KR CY C + GH+A+ C
Sbjct: 348 CQGVGGPGHKARVLAEATSQV----NNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNC- 402
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++P C+ CG +GH DC
Sbjct: 403 -----RAPR-----KKGCWKCGKEGHQMKDC 423
>gi|451168121|gb|AGF30845.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 387 CFNCGKXGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQA 426
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 9/76 (11%)
Query: 53 ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGH 109
A V C+NC GH+A++C C+ C GH ++C + + + H+
Sbjct: 381 ARRIVKCFNCGKXGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQANFLGKIWPSHKGR- 439
Query: 110 MAKECPGQTAGKSPEP 125
PG PEP
Sbjct: 440 -----PGNFLQSRPEP 450
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
++ +G + + C+ C GH AR C A C+ C +GH KDCT
Sbjct: 376 SNFKGARRIVKCFNCGKXGHIARNCKAPRKKGCWKCGQEGHQMKDCT 422
>gi|189242337|ref|XP_001810078.1| PREDICTED: similar to orf [Tribolium castaneum]
gi|270016528|gb|EFA12974.1| hypothetical protein TcasGA2_TC004277 [Tribolium castaneum]
Length = 1399
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 80 CYNCNSSGHFARNCPNDSSK-RCYACHQAGHMAKECPGQTAGKSPE 124
CYNCN GH + NCP K RC C++ GH AK+C K E
Sbjct: 269 CYNCNEVGHISTNCPKPQKKSRCNTCNRVGHFAKDCQQSNQRKDTE 314
Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 8/45 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC 52
+CYNC + GH +CP K +R C CN GHFA++C
Sbjct: 268 KCYNCNEVGHISTNCP-KPQKKSR-------CNTCNRVGHFAKDC 304
Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 59 CYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNCPNDSSKR 100
CYNC+ GH++ +C + C CN GHFA++C + ++
Sbjct: 269 CYNCNEVGHISTNCPKPQKKSRCNTCNRVGHFAKDCQQSNQRK 311
>gi|56608697|gb|AAW02982.1| gag protein [Human immunodeficiency virus 1]
gi|213137181|gb|ACJ44275.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ + C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 387 RRXVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTGRQA 431
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 24 QKSSADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
QKS + +G + + C+ C GH AR C A C+ C +GH KDCT
Sbjct: 379 QKS--NLKGPRRXVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCT 427
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKE 113
V C+NC +GH+A++C C+ C GH ++C + + + H+
Sbjct: 390 VKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTGRQANFLGKLWPSHKGR----- 444
Query: 114 CPGQTAGKSPEP 125
PG PEP
Sbjct: 445 -PGNFLQSRPEP 455
>gi|441468745|gb|AGC36688.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 35/81 (43%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A + N + + K +I CYNC GH ARNC
Sbjct: 348 CQGVGGPGHKARVLAEATSQVNNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNCRAPRK 407
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C + GH K+C + A
Sbjct: 408 KGCWKCGKEGHQMKDCTERQA 428
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K I CY C GH AR C A C+ C +GH KDCT + +
Sbjct: 378 SNFKGTKRTIKCYNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 428
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 18/91 (19%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECP 115
C G GH A+ +S + N++ + +KR CY C + GH+A+ C
Sbjct: 348 CQGVGGPGHKARVLAEATSQV----NNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNC- 402
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++P C+ CG +GH DC
Sbjct: 403 -----RAPR-----KKGCWKCGKEGHQMKDC 423
>gi|373842332|gb|AEY77155.1| gag protein [Human immunodeficiency virus]
Length = 501
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ ++ C+NC GH ARNC K C+ C + GH K+CP + A
Sbjct: 388 RKTVKCFNCGKEGHLARNCKAPRKKGCWKCGKEGHQMKDCPERQA 432
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMA 111
++V C+NC +GH+A++C C+ C GH ++CP + + + H+
Sbjct: 389 KTVKCFNCGKEGHLARNCKAPRKKGCWKCGKEGHQMKDCPERQANFLGKIWPSHKGR--- 445
Query: 112 KECPGQTAGKSPEP 125
PG PEP
Sbjct: 446 ---PGNFLQSRPEP 456
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
R + + C+ C GH AR C A C+ C +GH KDC
Sbjct: 385 RNQRKTVKCFNCGKEGHLARNCKAPRKKGCWKCGKEGHQMKDC 427
>gi|32765948|gb|AAP69039.1| gag protein [Human immunodeficiency virus 1]
gi|32765950|gb|AAP69040.1| gag protein [Human immunodeficiency virus 1]
gi|32765952|gb|AAP69041.1| gag protein [Human immunodeficiency virus 1]
gi|32765956|gb|AAP69043.1| gag protein [Human immunodeficiency virus 1]
gi|34329773|gb|AAQ63981.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ +I C+NC GH ARNC K C+ C + GH K+CP + A
Sbjct: 379 RRTIKCFNCGKDGHLARNCRAPRKKGCWKCGREGHQMKDCPERQA 423
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 15/76 (19%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC- 114
++ C+NC GH+A++C C+ C GH ++CP QA + K
Sbjct: 381 TIKCFNCGKDGHLARNCRAPRKKGCWKCGREGHQMKDCPE---------RQANFLGKIWP 431
Query: 115 -----PGQTAGKSPEP 125
PG PEP
Sbjct: 432 SNKGRPGNFLQSRPEP 447
>gi|270012874|gb|EFA09322.1| hypothetical protein TcasGA2_TC001648 [Tribolium castaneum]
Length = 1388
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 80 CYNCNSSGHFARNCPNDSSK-RCYACHQAGHMAKECPGQTAGKSPE 124
CYNCN GH + NCP K RC C++ GH AK+C K E
Sbjct: 209 CYNCNEVGHISTNCPKPQKKSRCNTCNRVGHFAKDCQQSNQRKDTE 254
Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 8/45 (17%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC 52
+CYNC + GH +CP K +R C CN GHFA++C
Sbjct: 208 KCYNCNEVGHISTNCP-KPQKKSR-------CNTCNRVGHFAKDC 244
Score = 42.4 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 59 CYNCSGQGHVAKDC-TVKSSIICYNCNSSGHFARNCPNDSSKR 100
CYNC+ GH++ +C + C CN GHFA++C + ++
Sbjct: 209 CYNCNEVGHISTNCPKPQKKSRCNTCNRVGHFAKDCQQSNQRK 251
>gi|22037894|gb|AAM90230.1|AF468659_1 gag protein [Simian immunodeficiency virus]
Length = 512
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
CYNC GH AR+CP ++C+ C +AGH +K C
Sbjct: 400 CYNCGQFGHLARDCPKPKERKCFKCGRAGHFSKPC 434
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
CYNC GH+A+DC C+ C +GHF++ C
Sbjct: 400 CYNCGQFGHLARDCPKPKERKCFKCGRAGHFSKPC 434
Score = 43.1 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 9/49 (18%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECAT 54
T +CYNC FGH CP+ C+KC GHF++ C T
Sbjct: 397 TPKCYNCGQFGHLARDCPKPKERK---------CFKCGRAGHFSKPCRT 436
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
Query: 98 SKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+ +CY C Q GH+A++CP K C+ CG GH S C+
Sbjct: 397 TPKCYNCGQFGHLARDCPKPKERK-----------CFKCGRAGHFSKPCR 435
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 39 CYKCNNYGHFARECAT-ESVTCYNCSGQGHVAKDCTVKSSI 78
CY C +GH AR+C + C+ C GH +K C + I
Sbjct: 400 CYNCGQFGHLARDCPKPKERKCFKCGRAGHFSKPCRTGTPI 440
>gi|120883|sp|P27978.1|GAG_SIVVG RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains:
RecName: Full=Matrix protein p17; Short=MA; Contains:
RecName: Full=Capsid protein p24; Short=CA; Contains:
RecName: Full=Spacer peptide p2; Contains: RecName:
Full=Nucleocapsid protein p7; Short=NC; Contains:
RecName: Full=Spacer peptide p1; Contains: RecName:
Full=p6-gag
gi|334403|gb|AAA91913.1| gag polyprotein [Simian immunodeficiency virus]
Length = 521
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
+ + CYNC GH R CP RC C + GH+AK+C GQ
Sbjct: 399 RPPVKCYNCGKFGHMQRQCPEPRKMRCLKCGKPGHLAKDCRGQ 441
Score = 42.7 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 9/46 (19%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC 52
++CYNC FGH Q CP+ + C KC GH A++C
Sbjct: 402 VKCYNCGKFGHMQRQCPEPRK---------MRCLKCGKPGHLAKDC 438
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 100 RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+CY C + GHM ++CP EP + C CG GHL+ DC+
Sbjct: 403 KCYNCGKFGHMQRQCP--------EP---RKMRCLKCGKPGHLAKDCR 439
>gi|213138164|gb|ACJ44753.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C H AR A E+++ NC+ + K ++ C+NC GH ARNC
Sbjct: 351 CQGVGGPSHKARVLA-EAMSQTNCNIMMQRSNFKGSKRTVKCFNCGREGHIARNCRAPRK 409
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C Q GH K+C + A
Sbjct: 410 KGCWKCGQEGHQMKDCTERQA 430
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K + C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 380 SNFKGSKRTVKCFNCGREGHIARNCRAPRKKGCWKCGQEGHQMKDCTERQA 430
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQT 118
C G H A+ + ++ NCN + + + +C+ C + GH+A+ C
Sbjct: 351 CQGVGGPSHKAR--VLAEAMSQTNCNIMMQRSNFKGSKRTVKCFNCGREGHIARNC---- 404
Query: 119 AGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++P C+ CG +GH DC
Sbjct: 405 --RAPR-----KKGCWKCGQEGHQMKDC 425
>gi|194399848|gb|ACF60828.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ S+ C+NC +GH ARNC K C+ C GH K+CP + A
Sbjct: 385 RGSVKCFNCGKAGHIARNCRAPRKKGCWKCGNDGHQMKDCPERQA 429
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 16/77 (20%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
SV C+NC GH+A++C C+ C + GH ++CP QA + K P
Sbjct: 387 SVKCFNCGKAGHIARNCRAPRKKGCWKCGNDGHQMKDCPE---------RQANFLGKIWP 437
Query: 116 GQTAGK-------SPEP 125
G+ PEP
Sbjct: 438 SPKGGRPGNFLQSRPEP 454
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
R + + C+ C GH AR C A C+ C GH KDC
Sbjct: 382 RNQRGSVKCFNCGKAGHIARNCRAPRKKGCWKCGNDGHQMKDC 424
Score = 39.3 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 17/91 (18%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCN---SSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
C G GH A+ S + + N G+F RN S +C+ C +AGH+A+ C
Sbjct: 348 CQGVGGPGHKARVLAEAMSQVTNSANIMMQRGNF-RN--QRGSVKCFNCGKAGHIARNC- 403
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++P C+ CG+ GH DC
Sbjct: 404 -----RAPR-----KKGCWKCGNDGHQMKDC 424
>gi|45550632|ref|NP_648926.3| CG9715 [Drosophila melanogaster]
gi|45445854|gb|AAF49404.2| CG9715 [Drosophila melanogaster]
Length = 1734
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 14/95 (14%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSG 64
S +C NCF+ GH + CP+ +VC+ C GH C + C+ C
Sbjct: 849 SHAKCSNCFEMGHVRSKCPRPRKP--------LVCFICGTMGHAEPRCP--NAICFGCGS 898
Query: 65 QGHV----AKDCTVKSSIICYNCNSSGHFARNCPN 95
+ + C+ S ++C C GH +CP+
Sbjct: 899 KQEIYVQQCNKCSFHSRLVCQLCKMRGHGVDHCPD 933
>gi|256252239|dbj|BAH97496.1| Gag [Human immunodeficiency virus 1]
Length = 506
Score = 52.4 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 393 CFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQA 432
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
V C+NC +GH+A++C C+ C GH ++C + ++ + +K PG
Sbjct: 391 VKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDC---TGRQANFLGKIWPSSKGRPG 447
Query: 117 QTAGKSPEP 125
PEP
Sbjct: 448 NFPQSRPEP 456
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
+G + + C+ C GH AR C A C+ C +GH KDCT
Sbjct: 385 KGQRKIVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCT 428
>gi|256252249|dbj|BAH97505.1| Gag [Human immunodeficiency virus 1]
Length = 500
Score = 52.4 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 393 CFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQA 432
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
V C+NC +GH+A++C C+ C GH ++C + ++ + +K PG
Sbjct: 391 VKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDC---TGRQANFLGKIWPSSKGRPG 447
Query: 117 QTAGKSPEP 125
PEP
Sbjct: 448 NFPQSRPEP 456
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
+G + + C+ C GH AR C A C+ C +GH KDCT
Sbjct: 385 KGQRKIVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCT 428
>gi|441468946|gb|AGC36861.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 34/81 (41%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A N + + K +I CYNC GH ARNC
Sbjct: 348 CQGVGGPGHKARVLAEAMSQVNNNATMMQRSNFKGTKRTIKCYNCGKEGHLARNCRAPRK 407
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C + GH K+C + A
Sbjct: 408 KGCWKCGKEGHQMKDCTERQA 428
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K I CY C GH AR C A C+ C +GH KDCT + +
Sbjct: 378 SNFKGTKRTIKCYNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 428
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECP 115
C G GH A+ S + N++ + +KR CY C + GH+A+ C
Sbjct: 348 CQGVGGPGHKARVLAEAMSQV----NNNATMMQRSNFKGTKRTIKCYNCGKEGHLARNC- 402
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++P C+ CG +GH DC
Sbjct: 403 -----RAPR-----KKGCWKCGKEGHQMKDC 423
>gi|115334432|dbj|BAF33170.1| Gag [Human immunodeficiency virus 1]
Length = 497
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K I C+NC GH ARNC K C+ C + GH K+C G+ A
Sbjct: 383 KRIIKCFNCGKEGHIARNCKAPRKKGCWKCGEEGHQMKDCTGRQA 427
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 8/72 (11%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKE 113
+ C+NC +GH+A++C C+ C GH ++C + + + H G
Sbjct: 386 IKCFNCGKEGHIARNCKAPRKKGCWKCGEEGHQMKDCTGRQANFLGKIWPSHNKGR---- 441
Query: 114 CPGQTAGKSPEP 125
PG PEP
Sbjct: 442 -PGNFLQNRPEP 452
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSSII------CYNC 83
+G K I C+ C GH AR C A C+ C +GH KDCT + + +N
Sbjct: 380 KGPKRIIKCFNCGKEGHIARNCKAPRKKGCWKCGEEGHQMKDCTGRQANFLGKIWPSHNK 439
Query: 84 NSSGHFARNCPNDSS 98
G+F +N P ++
Sbjct: 440 GRPGNFLQNRPEPTA 454
>gi|206570691|gb|ACI12956.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A E+++ +G + + +I C+NC GH ARNC
Sbjct: 348 CQGVGGPGHKARVLA-EAMSQVQHTGIMMQRGNFKGRKTIKCFNCGKEGHLARNCRAPRK 406
Query: 99 KRCYACHQAGHMAKECP 115
K C+ C + GH K+CP
Sbjct: 407 KGCWKCGKEGHQMKDCP 423
Score = 41.6 bits (96), Expect = 0.097, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVK------SSIICYNCNSSGHF 89
I C+ C GH AR C A C+ C +GH KDC ++ I N G+F
Sbjct: 386 IKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCPLERQANFLGKIWPSNKGRPGNF 445
Query: 90 ARNCPNDSSKRCYACHQAGHMAKECP--GQTAGKSPEPVVDM 129
++ P ++ + G P GQ + P P+V +
Sbjct: 446 PQSRPEPTAPPAES-FGMGEEITSSPKQGQRDREQPPPLVSL 486
>gi|255986394|gb|ACU50580.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
C+NC GH ARNC + C+ C Q GH KECP + A
Sbjct: 392 CFNCGKEGHIARNCRAPRKRGCWKCGQEGHQMKECPERQA 431
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKE 113
V C+NC +GH+A++C C+ C GH + CP + + + H+
Sbjct: 390 VKCFNCGKEGHIARNCRAPRKRGCWKCGQEGHQMKECPERQANFLGKIWPSHKGR----- 444
Query: 114 CPGQTAGKSPEP 125
PG PEP
Sbjct: 445 -PGNFLQSRPEP 455
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
R + + C+ C GH AR C A C+ C +GH K+C
Sbjct: 384 RNQRKIVKCFNCGKEGHIARNCRAPRKRGCWKCGQEGHQMKEC 426
>gi|353239689|emb|CCA71590.1| hypothetical protein PIIN_05527 [Piriformospora indica DSM 11827]
Length = 672
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 36/101 (35%), Gaps = 24/101 (23%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSS----IICYNCNSSGHFARNCPNDSSKRCYACHQAGHM 110
E C C H KDC +S IC C S HF R+CP K
Sbjct: 346 EGYVCRICQSTEHSIKDCPERSKPPEGYICRRCQQSDHFIRDCPTKDEK----------- 394
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQK 151
G T G+ P P C CG + HL DC V K
Sbjct: 395 -----GDTGGRKPPP----GYVCRACGSENHLIDDCPEVVK 426
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 27/77 (35%), Gaps = 18/77 (23%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES------------ 56
C C H CP++S G +C +C HF R+C T+
Sbjct: 350 CRICQSTEHSIKDCPERSKPPE-----GYICRRCQQSDHFIRDCPTKDEKGDTGGRKPPP 404
Query: 57 -VTCYNCSGQGHVAKDC 72
C C + H+ DC
Sbjct: 405 GYVCRACGSENHLIDDC 421
>gi|68522124|gb|AAY98712.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 18/71 (25%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC------------------PG 116
K SI C+NC GH ARNC K C+ C + GH K+C PG
Sbjct: 383 KRSIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPG 442
Query: 117 QTAGKSPEPVV 127
PEP V
Sbjct: 443 NFLQNRPEPTV 453
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K I C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 377 SNFKGPKRSIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 427
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 18/91 (19%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECP 115
C G GH A+ S NS+G + KR C+ C + GH+A+ C
Sbjct: 347 CQGVGGPGHKARVLAEAMS----QMNSTGVLMQRSNFKGPKRSIKCFNCGKEGHLARNC- 401
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++P C+ CG +GH DC
Sbjct: 402 -----RAPR-----KKGCWKCGKEGHQMKDC 422
>gi|114152122|sp|Q1A249.3|POL_SIVEK RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Spacer peptide p2; Contains:
RecName: Full=Nucleocapsid protein p7; Short=NC;
Contains: RecName: Full=p6-pol; Short=p6*; Contains:
RecName: Full=Protease; AltName: Full=PR; AltName:
Full=Retropepsin; Contains: RecName: Full=Reverse
transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1448
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 74 VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
++ +I C+NC GH ARNC K C+ C Q GH K+C
Sbjct: 389 IRKTIKCFNCGKEGHLARNCKAPRKKGCWKCGQEGHQMKDC 429
Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
+++ C+NC +GH+A++C C+ C GH ++C
Sbjct: 391 KTIKCFNCGKEGHLARNCKAPRKKGCWKCGQEGHQMKDC 429
Score = 42.0 bits (97), Expect = 0.092, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
+G + I C+ C GH AR C A C+ C +GH KDC
Sbjct: 387 KGIRKTIKCFNCGKEGHLARNCKAPRKKGCWKCGQEGHQMKDC 429
>gi|555018|gb|AAA45074.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 491
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 393 CFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQA 432
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
V C+NC +GH+A++C C+ C GH ++C + ++ + +K PG
Sbjct: 391 VKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDC---TGRQANFLGKIWPSSKGRPG 447
Query: 117 QTAGKSPEP 125
PEP
Sbjct: 448 NFPQSRPEP 456
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
+G + + C+ C GH AR C A C+ C +GH KDCT
Sbjct: 385 KGQRKIVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCT 428
>gi|49472949|gb|AAT66291.1| gag protein [Human immunodeficiency virus 1]
Length = 504
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 37/91 (40%), Gaps = 19/91 (20%)
Query: 39 CYKCNNYGHFARECA------TESVTCY----NCSGQGHVAKDCTVKSSIICYNCNSSGH 88
C GH AR A T S T N GQ + K C+NC GH
Sbjct: 354 CQGVGGPGHKARVLAEAMSQVTNSATVMMQRGNFKGQRKIVK---------CFNCGKEGH 404
Query: 89 FARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
ARNC K C+ C Q GH K+C G+ A
Sbjct: 405 IARNCRAPRKKGCWKCGQEGHQMKDCTGRQA 435
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
+G + + C+ C GH AR C A C+ C +GH KDCT
Sbjct: 388 KGQRKIVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCT 431
>gi|145350100|ref|XP_001419461.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579692|gb|ABO97754.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 170
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 19/118 (16%)
Query: 35 VGIVCYKCNNYGHFAREC--ATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARN 92
+ C++C GH EC + C+ C + H+A+DC +C+NC + GH +R+
Sbjct: 2 AALRCFRCGQGGHREAECELPAKKKACHLCGYKSHIARDCP---HGLCFNCLTPGHQSRD 58
Query: 93 CP------NDSSKR-CYACHQAGHMAKECPGQTAGKSPEPVVDMS-LTCYVCGHQGHL 142
CP D+ +R C C ++GH+ +C + D++ + CYVCG +GHL
Sbjct: 59 CPYARGSGRDAQERCCLRCGKSGHVVADCVYRFD------ASDLAQIHCYVCGSKGHL 110
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 66/172 (38%), Gaps = 33/172 (19%)
Query: 4 TSTIQCYNCFDFGHYQYSC--PQKSSA---------DARGDKVGIVCYKCNNYGHFAREC 52
+ ++C+ C GH + C P K A AR G+ C+ C GH +R+C
Sbjct: 1 AAALRCFRCGQGGHREAECELPAKKKACHLCGYKSHIARDCPHGL-CFNCLTPGHQSRDC 59
Query: 53 A--------TESVTCYNCSGQGHVAKDCTVK------SSIICYNCNSSGHFARNCPNDSS 98
+ C C GHV DC + + I CY C S GH P DS
Sbjct: 60 PYARGSGRDAQERCCLRCGKSGHVVADCVYRFDASDLAQIHCYVCGSKGHLC-CAPQDSL 118
Query: 99 K----RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
C C GH+ C G D + C+ CG +GH++ +C
Sbjct: 119 PPGLPSCCRCGGDGHLDTACAHSRRGFGGGAAPDFA--CFHCGQRGHIAREC 168
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 48/128 (37%), Gaps = 25/128 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA-------TESVTCYN 61
C+NC GH CP + D C +C GH +C + CY
Sbjct: 46 CFNCLTPGHQSRDCPYARGSGR--DAQERCCLRCGKSGHVVADCVYRFDASDLAQIHCYV 103
Query: 62 CSGQGHV---AKDCTVKSSIICYNCNSSGHFARNCPNDSSKR-----------CYACHQA 107
C +GH+ +D C C GH C + S+R C+ C Q
Sbjct: 104 CGSKGHLCCAPQDSLPPGLPSCCRCGGDGHLDTACAH--SRRGFGGGAAPDFACFHCGQR 161
Query: 108 GHMAKECP 115
GH+A+ECP
Sbjct: 162 GHIARECP 169
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 37/102 (36%), Gaps = 20/102 (19%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES------VTCYNC 62
C C GH C + A D I CY C + GH CA + +C C
Sbjct: 74 CLRCGKSGHVVADCVYRFDAS---DLAQIHCYVCGSKGHLC--CAPQDSLPPGLPSCCRC 128
Query: 63 SGQGHVAKDCT---------VKSSIICYNCNSSGHFARNCPN 95
G GH+ C C++C GH AR CP+
Sbjct: 129 GGDGHLDTACAHSRRGFGGGAAPDFACFHCGQRGHIARECPS 170
>gi|32765954|gb|AAP69042.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ +I C+NC GH ARNC K C+ C + GH K+CP + A
Sbjct: 379 RRTIKCFNCGKDGHLARNCRAPRKKGCWKCGREGHRMKDCPERQA 423
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 15/76 (19%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMA---- 111
++ C+NC GH+A++C C+ C GH ++CP QA +
Sbjct: 381 TIKCFNCGKDGHLARNCRAPRKKGCWKCGREGHRMKDCPE---------RQANFLGKIWP 431
Query: 112 --KECPGQTAGKSPEP 125
K PG PEP
Sbjct: 432 SNKGRPGNFLQSRPEP 447
Score = 42.0 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 24 QKSSADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
QKS + +G + I C+ C GH AR C A C+ C +GH KDC
Sbjct: 371 QKS--NFKGPRRTIKCFNCGKDGHLARNCRAPRKKGCWKCGREGHRMKDC 418
>gi|255739097|gb|ACU31486.1| gag protein [Human immunodeficiency virus 1]
Length = 489
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 386 CFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTGRQA 425
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKE 113
V C+NC +GH+A++C C+ C GH ++C + + + H+
Sbjct: 384 VKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTGRQANFLGKIWPSHKGR----- 438
Query: 114 CPGQTAGKSPEP 125
PG PEP
Sbjct: 439 -PGNFLQSRPEP 449
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
+G + + C+ C GH AR C A C+ C +GH KDCT
Sbjct: 378 KGPRXIVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCT 421
>gi|166026592|gb|ABY78606.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ + C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 389 RKVVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQA 433
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
R + + C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 386 RNPRKVVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQA 433
>gi|166026418|gb|ABY78519.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ + C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 389 RKVVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQA 433
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
V C+NC +GH+A++C C+ C GH ++C + ++ + +K PG
Sbjct: 392 VKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDC---TGRQANFLGKIWPSSKGRPG 448
Query: 117 QTAGKSPEP 125
PEP
Sbjct: 449 NFLQSRPEP 457
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
R + + C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 386 RNPRKVVKCFNCGKEGHIARNCKAPRKKGCWKCGQEGHQMKDCTGRQA 433
>gi|8920374|emb|CAB96407.1| Gag-Pol fusion polyprotein precursor [Simian immunodeficiency
virus]
Length = 1440
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 22/41 (53%)
Query: 74 VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
V I CYNC GH ARNC K C+ C Q GH KEC
Sbjct: 385 VNKKIKCYNCGKEGHVARNCRAPRRKGCWKCGQEGHNMKEC 425
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
+ + CYNC +GHVA++C C+ C GH + C
Sbjct: 387 KKIKCYNCGKEGHVARNCRAPRRKGCWKCGQEGHNMKEC 425
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
I CY C GH AR C A C+ C +GH K+CT
Sbjct: 389 IKCYNCGKEGHVARNCRAPRRKGCWKCGQEGHNMKECT 426
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 14/88 (15%)
Query: 62 CSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN---DSSKRCYACHQAGHMAKECPGQT 118
C G G A V + + NSS F + N + +CY C + GH+A+ C
Sbjct: 349 CQGVGGPAHKARVLAEAMSQVQNSSNVFMQRGNNGRVNKKIKCYNCGKEGHVARNC---- 404
Query: 119 AGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++P C+ CG +GH +C
Sbjct: 405 --RAPR-----RKGCWKCGQEGHNMKEC 425
>gi|115485157|ref|NP_001067722.1| Os11g0296500 [Oryza sativa Japonica Group]
gi|77549987|gb|ABA92784.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
gi|77549988|gb|ABA92785.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
gi|113644944|dbj|BAF28085.1| Os11g0296500 [Oryza sativa Japonica Group]
gi|215697532|dbj|BAG91526.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 412
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 65/166 (39%), Gaps = 46/166 (27%)
Query: 7 IQCYNCFDFGHYQYSCPQK--------SSADARGDK----VGIVCYKCNNYGHFARECA- 53
+ C+NC GHY CPQK ++A A DK G+ C+ C + GHF+ C
Sbjct: 241 VTCFNCGGKGHYSNKCPQKQKQHGVRSTNAAAMKDKTPNLTGVTCFDCGDRGHFSYTCPQ 300
Query: 54 -------TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS--------- 97
T + ++ + + D +++ NC + H RN P S
Sbjct: 301 NLLEVMLTAELEPHDDTYERQPKADNGTVPTVLSLNCGEASHCGRNNPMKSLESSSDKIN 360
Query: 98 --------SKR-----CYACHQAGHMAKECP----GQTAGKSPEPV 126
KR C+ CH+ GH A CP G +G S P+
Sbjct: 361 STAMTYKAPKRVLGVICFNCHEEGHYANRCPQKQQGINSGTSQSPI 406
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 13/86 (15%)
Query: 63 SGQGHVAKDCTVKSS--IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAG 120
S + +VA D S + C+NC GH++ CP + A M + P T
Sbjct: 224 SDKANVAADKAPNQSLGVTCFNCGGKGHYSNKCPQKQKQHGVRSTNAAAMKDKTPNLTG- 282
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDC 146
+TC+ CG +GH SY C
Sbjct: 283 ----------VTCFDCGDRGHFSYTC 298
>gi|397570339|gb|EJK47249.1| hypothetical protein THAOC_34043 [Thalassiosira oceanica]
Length = 628
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 62/150 (41%), Gaps = 22/150 (14%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQ 65
+I+C NC + GH CP+ C C GH C +S+ C+NC
Sbjct: 416 SIKCNNCGEVGHMAKDCPKDGQLKP--------CGLCAGLGHEMWACPMKSI-CFNCGVP 466
Query: 66 GHVAKDCTVKSSI----ICYNCNSSGHFA---RNCPNDSSKRCYACHQAGHMAKECPGQT 118
GHV+++C + + IC C S H R P ++ + C Q G GQ
Sbjct: 467 GHVSRECNQRRGVPERKICTICFRSDHHRFQCRERPWNAPFQDAICMQTGRQ-----GQL 521
Query: 119 AGKSPEPVVDMS-LTCYVCGHQGHLSYDCK 147
+ ++C+ CG +GHL DC+
Sbjct: 522 MKNEMRWFFGLRGVSCFNCGQKGHLGIDCR 551
>gi|325635503|gb|ADZ33352.1| gag protein [Human immunodeficiency virus 1]
gi|325635518|gb|ADZ33365.1| gag protein [Human immunodeficiency virus 1]
gi|325635541|gb|ADZ33385.1| gag protein [Human immunodeficiency virus 1]
gi|325635556|gb|ADZ33398.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 392 CFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTGRQA 431
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS-----IICYNCN 84
R + + C+ C GH AR C A C+ C +GH KDCT + + I N
Sbjct: 384 RNQRKIVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTGRQANFLGKIWPSNKG 443
Query: 85 SSGHFARNCPNDSS 98
G+F ++ P S+
Sbjct: 444 RPGNFLQSRPEPSA 457
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
V C+NC +GH+A++C C+ C GH ++C + ++ + K PG
Sbjct: 390 VKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDC---TGRQANFLGKIWPSNKGRPG 446
Query: 117 QTAGKSPEP 125
PEP
Sbjct: 447 NFLQSRPEP 455
>gi|300720888|gb|ADK33564.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 388 CFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTGRQA 427
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 15/103 (14%)
Query: 26 SSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNS 85
+ A ++ + + I+ K N G V C+NC +GH+A++C C+ C
Sbjct: 361 AEAMSQANNINIMMQKSNFKG------PXRXVKCFNCGKEGHIARNCRAPRKKGCWKCGQ 414
Query: 86 SGHFARNCPNDSSK---RCYACHQAGHMAKECPGQTAGKSPEP 125
GH ++C + + + H+ PG PEP
Sbjct: 415 EGHQMKDCTGRQANFLGKIWPSHKGR------PGNFLQSRPEP 451
>gi|357450709|ref|XP_003595631.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355484679|gb|AES65882.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 338
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 23 PQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYN 82
P+K +A + IVC+ C GH + C E C C +GH+ DC ++ I+C+N
Sbjct: 7 PKKKNAPSE-----IVCFNCGEKGHKSNVCPEEIKKCVQCGKKGHIVADCK-RNDIVCFN 60
Query: 83 CNSSGHFARNC 93
CN GH C
Sbjct: 61 CNEEGHIGSQC 71
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYN 61
++ S I C+NC + GH CP++ C +C GH +C + C+N
Sbjct: 11 NAPSEIVCFNCGEKGHKSNVCPEEIKK----------CVQCGKKGHIVADCKRNDIVCFN 60
Query: 62 CSGQGHVAKDC 72
C+ +GH+ C
Sbjct: 61 CNEEGHIGSQC 71
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 13/72 (18%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
S I+C+NC GH + CP + K+C C + GH+ +C + C+
Sbjct: 14 SEIVCFNCGEKGHKSNVCP-EEIKKCVQCGKKGHIVADCKRN------------DIVCFN 60
Query: 136 CGHQGHLSYDCK 147
C +GH+ CK
Sbjct: 61 CNEEGHIGSQCK 72
>gi|325635533|gb|ADZ33378.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 392 CFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTGRQA 431
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS-----IICYNCN 84
R + + C+ C GH AR C A C+ C +GH KDCT + + I N
Sbjct: 384 RNQRKIVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTGRQANFLGKIWPSNKG 443
Query: 85 SSGHFARNCPNDSS 98
SG+F ++ P S+
Sbjct: 444 RSGNFLQSRPEPSA 457
>gi|209156860|gb|ACI39914.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 22/40 (55%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
C+NC GH ARNC K C+ C GH K+CPG A
Sbjct: 387 CFNCGKQGHIARNCKAPRKKGCWKCGGEGHQMKDCPGGQA 426
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
V C+NC QGH+A++C C+ C GH ++CP
Sbjct: 385 VKCFNCGKQGHIARNCKAPRKKGCWKCGGEGHQMKDCP 422
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 27 SADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
+++ +G + + C+ C GH AR C A C+ C G+GH KDC
Sbjct: 375 NSNFKGQRKIVKCFNCGKQGHIARNCKAPRKKGCWKCGGEGHQMKDC 421
>gi|383506255|gb|AFH37786.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ + C+NC GH ARNC K C+ C + GH K+CP + A
Sbjct: 390 RKPVKCFNCGKDGHIARNCKAPRKKGCWKCGKEGHQMKDCPNRQA 434
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKE 113
V C+NC GH+A++C C+ C GH ++CPN + + + H+
Sbjct: 393 VKCFNCGKDGHIARNCKAPRKKGCWKCGKEGHQMKDCPNRQANFLGKIWPSHKGR----- 447
Query: 114 CPGQTAGKSPEP 125
PG PEP
Sbjct: 448 -PGNFLQSRPEP 458
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
R + + C+ C GH AR C A C+ C +GH KDC
Sbjct: 387 RNQRKPVKCFNCGKDGHIARNCKAPRKKGCWKCGKEGHQMKDC 429
>gi|320410218|gb|ADW26889.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ + C+NC GH ARNC K C+ C + GH K+CP + A
Sbjct: 390 RKPVKCFNCGKDGHIARNCKAPRKKGCWKCGKEGHQMKDCPNRQA 434
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKE 113
V C+NC GH+A++C C+ C GH ++CPN + + + H+
Sbjct: 393 VKCFNCGKDGHIARNCKAPRKKGCWKCGKEGHQMKDCPNRQANFLGKIWPSHKGR----- 447
Query: 114 CPGQTAGKSPEP 125
PG PEP
Sbjct: 448 -PGNFLQSRPEP 458
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
R + + C+ C GH AR C A C+ C +GH KDC
Sbjct: 387 RNQRKPVKCFNCGKDGHIARNCKAPRKKGCWKCGKEGHQMKDC 429
>gi|320410215|gb|ADW26888.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ + C+NC GH ARNC K C+ C + GH K+CP + A
Sbjct: 390 RKPVKCFNCGKDGHIARNCKAPRKKGCWKCGKEGHQMKDCPNRQA 434
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKE 113
V C+NC GH+A++C C+ C GH ++CPN + + + H+
Sbjct: 393 VKCFNCGKDGHIARNCKAPRKKGCWKCGKEGHQMKDCPNRQANFLGKIWPSHKGR----- 447
Query: 114 CPGQTAGKSPEP 125
PG PEP
Sbjct: 448 -PGNFLQSRPEP 458
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
R + + C+ C GH AR C A C+ C +GH KDC
Sbjct: 387 RNQRKPVKCFNCGKDGHIARNCKAPRKKGCWKCGKEGHQMKDC 429
>gi|440298472|gb|ELP91108.1| cellular nucleic acid binding protein, putative [Entamoeba invadens
IP1]
Length = 427
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 61/158 (38%), Gaps = 25/158 (15%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSG 64
T++CY C FGH CP A C+ C GHF+ +C + YN +
Sbjct: 119 ETMKCYTCGLFGHTTKYCPNSQEAGK--------CFICGESGHFSNKCP-QREEYYNTNK 169
Query: 65 QGHVAKDCTVK---------SSIICYNCNSSGHFARNCPN----DSSKRCYACHQAGHMA 111
Q H + + CY C SS H A+NCP+ D + H+ G
Sbjct: 170 QNHQGTNEEEYYEEQEEDPHTDQQCYKCGSSDHIAKNCPDAWKYDEKMKEQITHENGSKE 229
Query: 112 KECPGQTAGKSPEPVVDMS---LTCYVCGHQGHLSYDC 146
+ KS E V + + CY CG H+ DC
Sbjct: 230 FQENEPVQEKSIEKVKEKKTKQVGCYKCGSLDHIGRDC 267
>gi|357470885|ref|XP_003605727.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355506782|gb|AES87924.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 458
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 37 IVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND 96
IVC+KC GH + C E C+ C +GH DC ++CYNCN GH + C
Sbjct: 226 IVCFKCGEKGHKSNVCDREKKKCFRCGQKGHTLADCK-HGDVVCYNCNEEGHISSQCTQP 284
Query: 97 SSKR 100
R
Sbjct: 285 KKVR 288
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNC 62
+ + I C+ C + GH C ++ C++C GH +C V CYNC
Sbjct: 222 APTDIVCFKCGEKGHKSNVCDREKKK----------CFRCGQKGHTLADCKHGDVVCYNC 271
Query: 63 SGQGHVAKDCT 73
+ +GH++ CT
Sbjct: 272 NEEGHISSQCT 282
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 13/71 (18%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
+ I+C+ C GH + C + K+C+ C Q GH +C + CY
Sbjct: 224 TDIVCFKCGEKGHKSNVC-DREKKKCFRCGQKGHTLADCKHG------------DVVCYN 270
Query: 136 CGHQGHLSYDC 146
C +GH+S C
Sbjct: 271 CNEEGHISSQC 281
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 41 KCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR 100
+ N+ R A + C+ C +GH + C + C+ C GH +C +
Sbjct: 210 RLNDERRPKRRDAPTDIVCFKCGEKGHKSNVCD-REKKKCFRCGQKGHTLADCKHGDVV- 267
Query: 101 CYACHQAGHMAKEC 114
CY C++ GH++ +C
Sbjct: 268 CYNCNEEGHISSQC 281
>gi|213137706|gb|ACJ44533.1| gag protein [Human immunodeficiency virus 1]
Length = 491
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K S+ C+NC GH ARNC K C+ C Q GH K+C + A
Sbjct: 382 KRSVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTERQA 426
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 9/73 (12%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAK 112
SV C+NC +GH+A++C C+ C GH ++C + + + H+
Sbjct: 384 SVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTERQANFLGKIWPSHKGR---- 439
Query: 113 ECPGQTAGKSPEP 125
PG PEP
Sbjct: 440 --PGNFLQNRPEP 450
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K + C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 376 SNFKGPKRSVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTERQA 426
>gi|15292541|gb|AAK93539.1| SD06557p [Drosophila melanogaster]
Length = 1358
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 14/95 (14%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSG 64
S +C NCF+ GH + CP+ +VC+ C GH C + C+ C
Sbjct: 473 SHAKCSNCFEMGHVRSKCPRPRKP--------LVCFICGTMGHAEPRCP--NAICFGCGS 522
Query: 65 QGHV----AKDCTVKSSIICYNCNSSGHFARNCPN 95
+ + C+ S ++C C GH +CP+
Sbjct: 523 KQEIYVQQCNKCSFHSRLVCQLCKMRGHGVDHCPD 557
>gi|27374226|gb|AAO00988.1| CG9715-PA [Drosophila erecta]
Length = 900
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 14/95 (14%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSG 64
S +C NCF+ GH + CP+ +VC+ C GH C + C+ C
Sbjct: 14 SHAKCTNCFEMGHVRAKCPRPRKP--------LVCFLCGTVGHTEPRCP--NAICFGCGS 63
Query: 65 QGHV----AKDCTVKSSIICYNCNSSGHFARNCPN 95
+ + C+ S ++C C GH +CP+
Sbjct: 64 KQEIYVQQCNKCSFHSRLVCQLCKMRGHGVDHCPD 98
>gi|83318931|emb|CAJ38803.1| Vasa protein isoform [Platynereis dumerilii]
Length = 732
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 46/131 (35%), Gaps = 43/131 (32%)
Query: 59 CYNCSGQGHVAKDC----------TVKSSIICYNCNSSGHFARNCPN------------- 95
CY C G+GH+A+DC S C+ C GHF+R CPN
Sbjct: 102 CYKCGGEGHIARDCPDAGGSGGGGGGGGSRACFKCGEEGHFSRECPNGGSSGGGGGFGGS 161
Query: 96 -------------------DSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMS-LTCYV 135
K C+ C + GH ++ECP C+
Sbjct: 162 RGGGFGSSGGGGGFGGGGSGGGKGCFKCGEEGHFSRECPNGGGDSGGNSGDSNKGKGCFK 221
Query: 136 CGHQGHLSYDC 146
CG +GH S +C
Sbjct: 222 CGEEGHFSREC 232
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 45/137 (32%), Gaps = 25/137 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGI-VCYKCNNYGHFARECATESVTCYNCSGQGH 67
CY C GH CP + G G C+KC GHF+REC + G
Sbjct: 102 CYKCGGEGHIARDCPDAGGSGGGGGGGGSRACFKCGEEGHFSRECPNGGSSGGGGGFGGS 161
Query: 68 VAKDCTVKSSIICYNCN------------SSGHFARNCPND------------SSKRCYA 103
+ GHF+R CPN K C+
Sbjct: 162 RGGGFGSSGGGGGFGGGGSGGGKGCFKCGEEGHFSRECPNGGGDSGGNSGDSNKGKGCFK 221
Query: 104 CHQAGHMAKECPGQTAG 120
C + GH ++ECP G
Sbjct: 222 CGEEGHFSRECPNNEGG 238
>gi|161723024|gb|ABX76969.1| Vasa [Parhyale hawaiensis]
Length = 676
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 51/123 (41%), Gaps = 18/123 (14%)
Query: 39 CYKCNNYGHFARECATE----SVTCYNCSGQGHVAKDCTVKSSII---------CYNCNS 85
C KC GH A EC + + C+ C +GH++++C C+ C
Sbjct: 57 CRKCGEEGHRAFECTSGGGGGNRACFKCGKEGHMSRECPQGGGQSFGGGGGNRGCFKCGE 116
Query: 86 SGHFARNCPNDSSKRCYACH--QAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLS 143
GH +R CPN + GHMA++CP G + C+ CG QGH
Sbjct: 117 EGHTSRGCPNSGGGGKGCFKCGEDGHMARDCPQGGDGGG---GGGGNRGCFNCGEQGHNK 173
Query: 144 YDC 146
DC
Sbjct: 174 ADC 176
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 26/127 (20%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---------- 58
C C + GH + C +S G++ C+KC GH +REC
Sbjct: 57 CRKCGEEGHRAFEC---TSGGGGGNRA---CFKCGKEGHMSRECPQGGGQSFGGGGGNRG 110
Query: 59 CYNCSGQGHVAKDC--TVKSSIICYNCNSSGHFARNCPNDS--------SKRCYACHQAG 108
C+ C +GH ++ C + C+ C GH AR+CP ++ C+ C + G
Sbjct: 111 CFKCGEEGHTSRGCPNSGGGGKGCFKCGEDGHMARDCPQGGDGGGGGGGNRGCFNCGEQG 170
Query: 109 HMAKECP 115
H +CP
Sbjct: 171 HNKADCP 177
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 36/98 (36%), Gaps = 11/98 (11%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSG---Q 65
C+ C GH CPQ G C+KC GH +R C C
Sbjct: 81 CFKCGKEGHMSRECPQGGGQSFGGGGGNRGCFKCGEEGHTSRGCPNSGGGGKGCFKCGED 140
Query: 66 GHVAKDCTVKSSII--------CYNCNSSGHFARNCPN 95
GH+A+DC C+NC GH +CPN
Sbjct: 141 GHMARDCPQGGDGGGGGGGNRGCFNCGEQGHNKADCPN 178
>gi|110815950|sp|Q89928.3|POL_HV2EH RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Spacer peptide p2; Contains:
RecName: Full=Nucleocapsid protein p7; Short=NC;
Contains: RecName: Full=Transframe peptide; Short=TF;
Contains: RecName: Full=p6-pol; Short=p6*; Contains:
RecName: Full=Protease; AltName: Full=PR; AltName:
Full=Retropepsin; Contains: RecName: Full=Reverse
transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1464
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAG 120
K ++ C+NC +GH AR C + C+ C Q GH+ +CP + AG
Sbjct: 384 KRTVTCWNCGKAGHTARQCKAPRRQGCWKCGQQGHIMSKCPERQAG 429
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 9/70 (12%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
+VTC+NC GH A+ C C+ C GH CP QAG +
Sbjct: 386 TVTCWNCGKAGHTARQCKAPRRQGCWKCGQQGHIMSKCPE---------RQAGFLRVRPL 436
Query: 116 GQTAGKSPEP 125
G+ A + P P
Sbjct: 437 GKEASQFPRP 446
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 26 SSADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
++A R K + C+ C GH AR+C A C+ C QGH+ C
Sbjct: 376 AAAQPRAGKRTVTCWNCGKAGHTARQCKAPRRQGCWKCGQQGHIMSKC 423
>gi|912560|gb|AAB38056.1| gag polyprotein, partial [Human immunodeficiency virus 1]
Length = 462
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ I C+NC GH ARNC + + C Q GH KECPG+ A
Sbjct: 386 QRKIKCFNCGKEGHLARNCRAPRKRGRWKCGQEGHQMKECPGRQA 430
>gi|255986778|gb|ACU50771.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ +I C+NC GH ARNC K C+ C + GH K+C G+ A
Sbjct: 389 RKTIKCFNCGKEGHLARNCRAPRKKGCWKCGREGHQMKDCDGRQA 433
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMA 111
+++ C+NC +GH+A++C C+ C GH ++C + + + H+
Sbjct: 390 KTIKCFNCGKEGHLARNCRAPRKKGCWKCGREGHQMKDCDGRQANFLGKIWPSHKGR--- 446
Query: 112 KECPGQTAGKSPEP 125
PG PEP
Sbjct: 447 ---PGNFLQSRPEP 457
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
I C+ C GH AR C A C+ C +GH KDC
Sbjct: 392 IKCFNCGKEGHLARNCRAPRKKGCWKCGREGHQMKDC 428
>gi|118369873|ref|XP_001018139.1| Glutathione peroxidase family protein [Tetrahymena thermophila]
gi|89299906|gb|EAR97894.1| Glutathione peroxidase family protein [Tetrahymena thermophila SB210]
Length = 2190
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 36 GIVCYKCNNYGHFARECATES---VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARN 92
I C+KC+ GH A+ C +S C C G H CT + +C+ C GH ++
Sbjct: 2053 AITCFKCHRNGHTAQLCTNQSEERSKCVFCLGD-HSKDYCT---NYVCFKCYLVGHRIKD 2108
Query: 93 CPNDSS---KRCYACHQAGHMAKEC 114
C + S RC C + GH K+C
Sbjct: 2109 CAFEQSMDQSRCRICRKKGHTLKQC 2133
Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 32/100 (32%)
Query: 77 SIICYNCNSSGHFARNCPNDSSKR-------------------CYACHQAGHMAKECPGQ 117
+I C+ C+ +GH A+ C N S +R C+ C+ GH K+C
Sbjct: 2053 AITCFKCHRNGHTAQLCTNQSEERSKCVFCLGDHSKDYCTNYVCFKCYLVGHRIKDC--- 2109
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDC-----KLVQKS 152
+ E +D S C +C +GH C +VQKS
Sbjct: 2110 ----AFEQSMDQS-RCRICRKKGHTLKQCGSLNLDIVQKS 2144
>gi|158931142|sp|P27973.2|POL_SIVV1 RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Nucleocapsid protein p7;
Short=NC; Contains: RecName: Full=p6-pol; Short=p6*;
Contains: RecName: Full=Protease; AltName: Full=PR;
AltName: Full=Retropepsin; Contains: RecName:
Full=Reverse transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1470
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
CYNC GH R CP +C C + GH+AK+C GQ
Sbjct: 400 CYNCGKFGHMQRQCPEPRKIKCLKCGKPGHLAKDCRGQ 437
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 9/45 (20%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC 52
+CYNC FGH Q CP+ I C KC GH A++C
Sbjct: 399 KCYNCGKFGHMQRQCPEPRK---------IKCLKCGKPGHLAKDC 434
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 39 CYKCNNYGHFARECAT-ESVTCYNCSGQGHVAKDC 72
CY C +GH R+C + C C GH+AKDC
Sbjct: 400 CYNCGKFGHMQRQCPEPRKIKCLKCGKPGHLAKDC 434
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 100 RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
+CY C + GHM ++C PEP + C CG GHL+ DC+
Sbjct: 399 KCYNCGKFGHMQRQC--------PEP---RKIKCLKCGKPGHLAKDCR 435
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
CYNC GH+ + C I C C GH A++C
Sbjct: 400 CYNCGKFGHMQRQCPEPRKIKCLKCGKPGHLAKDC 434
>gi|395455351|gb|AFN62044.1| gag protein [Human immunodeficiency virus 1]
Length = 490
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K +I C+NC GH ARNC K C+ C Q GH K+C + A
Sbjct: 381 KRTIKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKDCTERQA 425
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K I C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 375 SNFKGPKRTIKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKDCTERQA 425
>gi|363583957|gb|AEW27518.1| gag protein [Human immunodeficiency virus 1]
Length = 490
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K +I C+NC GH ARNC K C+ C Q GH K+C + A
Sbjct: 381 KRTIKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKDCTERQA 425
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K I C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 375 SNFKGPKRTIKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKDCTERQA 425
>gi|259126890|gb|ACV94332.1| gag protein [Human immunodeficiency virus 1]
Length = 490
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K I C+NC GH ARNC K C+ C + GH K+C G+ A
Sbjct: 381 KRIIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTGRQA 425
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
+G K I C+ C GH AR C A C+ C +GH KDCT
Sbjct: 378 KGPKRIIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCT 421
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
+ C+NC +GH+A++C C+ C GH ++C + ++ + K PG
Sbjct: 384 IKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDC---TGRQANFLGKIWPSYKGRPG 440
Query: 117 QTAGKSPEP 125
PEP
Sbjct: 441 NFLQSRPEP 449
>gi|255986672|gb|ACU50719.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ + C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 387 RKVVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTGRQA 431
Score = 42.0 bits (97), Expect = 0.073, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
V C+NC +GH+A++C C+ C GH ++C
Sbjct: 390 VKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDC 426
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
R + + C+ C GH AR C A C+ C +GH KDCT
Sbjct: 384 RSPRKVVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCT 427
>gi|374430076|gb|AEZ51335.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 485
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 8/72 (11%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKE 113
V C+NC GH+AK+C C+ C GH ++CP + R + H+ G
Sbjct: 378 VKCFNCGRDGHIAKNCRAPRKKGCWKCGKEGHQLKDCPERQANFLGRIWPSHKGGR---- 433
Query: 114 CPGQTAGKSPEP 125
PG PEP
Sbjct: 434 -PGNFLQSRPEP 444
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K + C+NC GH A+NC K C+ C + GH K+CP + A
Sbjct: 375 KRMVKCFNCGRDGHIAKNCRAPRKKGCWKCGKEGHQLKDCPERQA 419
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
++ +G K + C+ C GH A+ C A C+ C +GH KDC
Sbjct: 369 SNFKGSKRMVKCFNCGRDGHIAKNCRAPRKKGCWKCGKEGHQLKDC 414
>gi|358392247|gb|EHK41651.1| hypothetical protein TRIATDRAFT_302109, partial [Trichoderma
atroviride IMI 206040]
Length = 219
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 40/79 (50%), Gaps = 17/79 (21%)
Query: 36 GIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
G CYKC +GHFA + + CY C G GH A D + C C GH+A N P+
Sbjct: 155 GPRCYKCGEFGHFAND-----LHCYKCGGYGHYAND------VHCDKCGGIGHYA-NDPH 202
Query: 96 DSSKRCYACHQAGHMAKEC 114
CY CH GH AKEC
Sbjct: 203 -----CYKCHAYGHFAKEC 216
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 25/83 (30%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECA--------- 53
S + +CY C +FGH+ + CYKC YGH+A +
Sbjct: 152 SANGPRCYKCGEFGHFAND---------------LHCYKCGGYGHYANDVHCDKCGGIGH 196
Query: 54 -TESVTCYNCSGQGHVAKDCTVK 75
CY C GH AK+C+++
Sbjct: 197 YANDPHCYKCHAYGHFAKECSMR 219
>gi|308472350|ref|XP_003098403.1| hypothetical protein CRE_06839 [Caenorhabditis remanei]
gi|308269067|gb|EFP13020.1| hypothetical protein CRE_06839 [Caenorhabditis remanei]
Length = 386
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 17/105 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV------TCYNC 62
C++C + GH CP+++S+ + G VC+KC + H EC + V TC+ C
Sbjct: 229 CFHCREPGHRLADCPKRNSSQSDG-----VCFKCGSMEHSIHECKKKGVKGFPYATCFVC 283
Query: 63 SGQGHVAKDCTVKSSII------CYNCNSSGHFARNCPNDSSKRC 101
GH+++DC ++ + C C + GH R+CP ++++
Sbjct: 284 KQVGHISRDCHQNANGVYPDGGACNVCGAVGHLKRDCPELAAQKA 328
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 14/97 (14%)
Query: 59 CYNCSGQGHVAKDCTVKSSI----ICYNCNSSGHFARNCPNDSSK-----RCYACHQAGH 109
C++C GH DC ++S +C+ C S H C K C+ C Q GH
Sbjct: 229 CFHCREPGHRLADCPKRNSSQSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVGH 288
Query: 110 MAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++++C G P+ C VCG GHL DC
Sbjct: 289 ISRDCHQNANGVYPD-----GGACNVCGAVGHLKRDC 320
>gi|340722932|ref|XP_003399853.1| PREDICTED: hypothetical protein LOC100652207 [Bombus terrestris]
Length = 463
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 15/98 (15%)
Query: 59 CYNCSGQGHVAKDCTVKSSI-----ICYNCNSSGHFARNCPNDSSKR-----CYACHQAG 108
C++C GH DC S IC+ C S+ H C C+ C + G
Sbjct: 325 CFHCRKSGHNLSDCPELGSEQAGTGICFKCGSTEHTHFECKVAKPMEFRYATCFICREQG 384
Query: 109 HMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
H+AK+CP G P+ C +CG HL DC
Sbjct: 385 HIAKQCPDNPKGIYPQ-----GGACKICGDVTHLKKDC 417
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 16/99 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES------VTCYNC 62
C++C GH CP+ S A +C+KC + H EC TC+ C
Sbjct: 325 CFHCRKSGHNLSDCPELGSEQAGTG----ICFKCGSTEHTHFECKVAKPMEFRYATCFIC 380
Query: 63 SGQGHVAKDCTVKSSII------CYNCNSSGHFARNCPN 95
QGH+AK C I C C H ++CP+
Sbjct: 381 REQGHIAKQCPDNPKGIYPQGGACKICGDVTHLKKDCPD 419
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 17/95 (17%)
Query: 38 VCYKCNNYGHFAREC------ATESVTCYNCSGQGHVAKDCTVKSSI-----ICYNCNSS 86
VC+ C GH +C + C+ C H +C V + C+ C
Sbjct: 324 VCFHCRKSGHNLSDCPELGSEQAGTGICFKCGSTEHTHFECKVAKPMEFRYATCFICREQ 383
Query: 87 GHFARNCPND------SSKRCYACHQAGHMAKECP 115
GH A+ CP++ C C H+ K+CP
Sbjct: 384 GHIAKQCPDNPKGIYPQGGACKICGDVTHLKKDCP 418
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 11/73 (15%)
Query: 79 ICYNCNSSGHFARNCPNDSSKR-----CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTC 133
+C++C SGH +CP S++ C+ C H EC K +P+ TC
Sbjct: 324 VCFHCRKSGHNLSDCPELGSEQAGTGICFKCGSTEHTHFEC------KVAKPMEFRYATC 377
Query: 134 YVCGHQGHLSYDC 146
++C QGH++ C
Sbjct: 378 FICREQGHIAKQC 390
>gi|4324879|gb|AAD17143.1| gag polyprotein [Human immunodeficiency virus 1]
Length = 492
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 18/69 (26%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC------------------PG 116
+ S+ C+NC GH ARNC K C+ C Q GH K+C PG
Sbjct: 383 RRSVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTERQANFLGKIWPSHKGRPG 442
Query: 117 QTAGKSPEP 125
+ PEP
Sbjct: 443 NSLQSRPEP 451
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G + + C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 377 SNFKGPRRSVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTERQA 427
>gi|222428275|gb|ACM49950.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ ++ C+NC GH A+NC K C+ C Q GH K+C G+ A
Sbjct: 387 RKTVKCFNCGKEGHIAKNCRAPRKKGCWKCGQEGHQMKDCTGRQA 431
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMA 111
++V C+NC +GH+AK+C C+ C GH ++C + + + H+
Sbjct: 388 KTVKCFNCGKEGHIAKNCRAPRKKGCWKCGQEGHQMKDCTGRQANFLGKIWPSHKGR--- 444
Query: 112 KECPGQTAGKSPEP 125
PG PEP
Sbjct: 445 ---PGNFLQSRPEP 455
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
R + + C+ C GH A+ C A C+ C +GH KDCT
Sbjct: 384 RNQRKTVKCFNCGKEGHIAKNCRAPRKKGCWKCGQEGHQMKDCT 427
>gi|197690522|emb|CAP70001.1| gag polyprotein [Human immunodeficiency virus 1]
Length = 506
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 392 CFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTGRQA 431
Score = 42.4 bits (98), Expect = 0.072, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
V C+NC +GH+A++C C+ C GH ++C
Sbjct: 390 VKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDC 426
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
+ C+ C GH AR C A C+ C +GH KDCT
Sbjct: 390 VKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCT 427
>gi|164606258|gb|ABY62278.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
V C+NC +GH+A++C C+ C GH ++CPN+ H + PG
Sbjct: 385 VKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCPNERQANFLGKIWPSHKGR--PG 442
Query: 117 QTAGKSPEP 125
PEP
Sbjct: 443 NFLQSRPEP 451
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
K + C+NC GH ARNC K C+ C + GH K+CP +
Sbjct: 382 KRIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCPNE 424
Score = 41.6 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
+G K + C+ C GH AR C A C+ C +GH KDC
Sbjct: 379 KGPKRIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDC 421
>gi|164606256|gb|ABY62277.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
V C+NC +GH+A++C C+ C GH ++CPN+ H + PG
Sbjct: 385 VKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCPNERQANFLGKIWPSHKGR--PG 442
Query: 117 QTAGKSPEP 125
PEP
Sbjct: 443 NFLQSRPEP 451
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
K + C+NC GH ARNC K C+ C + GH K+CP +
Sbjct: 382 KRIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCPNE 424
Score = 41.6 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
+G K + C+ C GH AR C A C+ C +GH KDC
Sbjct: 379 KGPKRIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDC 421
>gi|166025510|gb|ABY78065.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ ++ C+NC GH ARNC K C+ C + GH K+CP + A
Sbjct: 386 RKTVKCFNCGKDGHIARNCRAPRKKGCWKCGKEGHQMKDCPERQA 430
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMA 111
++V C+NC GH+A++C C+ C GH ++CP + + + H
Sbjct: 387 KTVKCFNCGKDGHIARNCRAPRKKGCWKCGKEGHQMKDCPERQANFLGKIWPSH------ 440
Query: 112 KECPGQTAGKSPEP 125
KE PG PEP
Sbjct: 441 KERPGNFFQSRPEP 454
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
R + + C+ C GH AR C A C+ C +GH KDC
Sbjct: 383 RNQRKTVKCFNCGKDGHIARNCRAPRKKGCWKCGKEGHQMKDC 425
>gi|114149304|sp|Q1A250.3|GAG_SIVEK RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains:
RecName: Full=Matrix protein p17; Short=MA; Contains:
RecName: Full=Capsid protein p24; Short=CA; Contains:
RecName: Full=Spacer peptide p2; Contains: RecName:
Full=Nucleocapsid protein p7; Short=NC; Contains:
RecName: Full=Spacer peptide p1; Contains: RecName:
Full=p6-gag
gi|87083831|gb|ABD19492.1| gag protein [Simian immunodeficiency virus]
gi|387119171|gb|AFJ52161.1| gag protein [Simian immunodeficiency virus]
Length = 511
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 74 VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
++ +I C+NC GH ARNC K C+ C Q GH K+C
Sbjct: 389 IRKTIKCFNCGKEGHLARNCKAPRKKGCWKCGQEGHQMKDC 429
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
+++ C+NC +GH+A++C C+ C GH ++C
Sbjct: 391 KTIKCFNCGKEGHLARNCKAPRKKGCWKCGQEGHQMKDC 429
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
+G + I C+ C GH AR C A C+ C +GH KDC
Sbjct: 387 KGIRKTIKCFNCGKEGHLARNCKAPRKKGCWKCGQEGHQMKDC 429
>gi|62733317|gb|AAX95434.1| Zinc knuckle, putative [Oryza sativa Japonica Group]
gi|125576916|gb|EAZ18138.1| hypothetical protein OsJ_33687 [Oryza sativa Japonica Group]
Length = 477
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 61/156 (39%), Gaps = 42/156 (26%)
Query: 7 IQCYNCFDFGHYQYSCPQK--------SSADARGDK----VGIVCYKCNNYGHFARECA- 53
+ C+NC GHY CPQK ++A A DK G+ C+ C + GHF+ C
Sbjct: 241 VTCFNCGGKGHYSNKCPQKQKQHGVRSTNAAAMKDKTPNLTGVTCFDCGDRGHFSYTCPQ 300
Query: 54 -------TESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDS--------- 97
T + ++ + + D +++ NC + H RN P S
Sbjct: 301 NLLEVMLTAELEPHDDTYERQPKADNGTVPTVLSLNCGEASHCGRNNPMKSLESSSDKIN 360
Query: 98 --------SKR-----CYACHQAGHMAKECPGQTAG 120
KR C+ CH+ GH A CP + G
Sbjct: 361 STAMTYKAPKRVLGVICFNCHEEGHYANRCPQKQQG 396
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 13/86 (15%)
Query: 63 SGQGHVAKDCTVKSS--IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAG 120
S + +VA D S + C+NC GH++ CP + A M + P T
Sbjct: 224 SDKANVAADKAPNQSLGVTCFNCGGKGHYSNKCPQKQKQHGVRSTNAAAMKDKTPNLTG- 282
Query: 121 KSPEPVVDMSLTCYVCGHQGHLSYDC 146
+TC+ CG +GH SY C
Sbjct: 283 ----------VTCFDCGDRGHFSYTC 298
>gi|412994131|emb|CCO14642.1| predicted protein [Bathycoccus prasinos]
Length = 421
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 68/162 (41%), Gaps = 39/162 (24%)
Query: 3 STSTIQCYNCFDFGHYQYSC--PQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCY 60
+ ++C+ C GH ++ C P K C+ C ++ H AR+C C+
Sbjct: 154 EAAAMRCFRCGKGGHREFECTLPAKQKP----------CHLCGDFDHQARDCP--KGLCF 201
Query: 61 NCSGQGHVAKDCTVKS-------SIICYNCNSSGHFARNCPNDSS----KR--CYACHQA 107
NC GH ++DC + S+ C C SGH C S KR CY C +
Sbjct: 202 NCLTPGHRSRDCEERRGIGRDQQSLCCLRCGRSGHVVEKCMFTFSEADLKRMPCYVCGEF 261
Query: 108 GHM--AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
GH+ A + Q GK L+C CG +GH+ C+
Sbjct: 262 GHLCCAPQ-DSQPPGK---------LSCVKCGGEGHVESTCR 293
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 10/105 (9%)
Query: 47 HFARECATESVTCYNCSGQGHVAKDCTVKSS-IICYNCNSSGHFARNCPNDSSKRCYACH 105
+F + ++ C+ C GH +CT+ + C+ C H AR+CP C+ C
Sbjct: 148 YFDDDFEAAAMRCFRCGKGGHREFECTLPAKQKPCHLCGDFDHQARDCPKGL---CFNCL 204
Query: 106 QAGHMAKECPGQTA-GKSPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
GH +++C + G+ SL C CG GH+ C
Sbjct: 205 TPGHRSRDCEERRGIGRD-----QQSLCCLRCGRSGHVVEKCMFT 244
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 38/99 (38%), Gaps = 18/99 (18%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES------VTCYNC 62
C C GH C + D + CY C +GH CA + ++C C
Sbjct: 228 CLRCGRSGHVVEKC---MFTFSEADLKRMPCYVCGEFGHLC--CAPQDSQPPGKLSCVKC 282
Query: 63 SGQGHVAKDC------TVKSSIICYNCNSSGHFARNCPN 95
G+GHV C + C+NC H AR CPN
Sbjct: 283 GGEGHVESTCRHSNFRRSQGGFECFNCGGP-HLARECPN 320
>gi|296415387|ref|XP_002837371.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633236|emb|CAZ81562.1| unnamed protein product [Tuber melanosporum]
Length = 302
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Query: 6 TIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-----ATESVTCY 60
++C NC H + CP+ + + C C + GH A +C A E+ C
Sbjct: 185 VLKCTNCDGLDHRRRDCPEPRKVEVNRN----ACRNCGDEGHRASDCTVPRQADENTECR 240
Query: 61 NCSGQGHVAKDCTVKSSIICYNCNSS-GHFARNCPNDSSKRCYACHQAGHMAKECP 115
C +++ + V SS + + GHF+++C N+ +C C + GH+ K+CP
Sbjct: 241 KCGKSVYMSFELAVFSSDANGGASKTVGHFSKDCTNERVPKCRNCDERGHVGKDCP 296
>gi|242081167|ref|XP_002445352.1| hypothetical protein SORBIDRAFT_07g011885 [Sorghum bicolor]
gi|241941702|gb|EES14847.1| hypothetical protein SORBIDRAFT_07g011885 [Sorghum bicolor]
Length = 266
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 63/152 (41%), Gaps = 27/152 (17%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARG---DKVGIVCYKCNNYGHFARECATESVTCYN 61
+ I C+ C GH+ C K + DK + K ++ GH C+ +
Sbjct: 104 TLITCFKCKKEGHHVKDCTLKKEEKSMSKIQDKKKMAHVKSSSMGHIPFMCSNK------ 157
Query: 62 CSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPND-------SSKRCYACHQAGHMAKEC 114
Q + K+ T++S CY C GH +CPN S+KR ++ +A +
Sbjct: 158 VDDQTTLPKNKTIRSKRKCYECKEKGHEIDSCPNKKSEGLSSSTKRLFS-----KVASKM 212
Query: 115 PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ A K + S CY C +GHLS DC
Sbjct: 213 QEKKANK------NKSRLCYTCREKGHLSMDC 238
>gi|110750380|gb|ABG90384.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 34/79 (43%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A N + + K ++ C+NC GH ARNC
Sbjct: 348 CQGVGGPGHKARVLAEAMSQVTNTNIMMQRSNFKGSKRTVKCFNCGKEGHIARNCRAPRK 407
Query: 99 KRCYACHQAGHMAKECPGQ 117
K C+ C + GH K+C G+
Sbjct: 408 KGCWKCGKEGHQMKDCTGE 426
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
++ +G K + C+ C GH AR C A C+ C +GH KDCT
Sbjct: 378 SNFKGSKRTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCT 424
>gi|402470610|gb|EJW04755.1| hypothetical protein EDEG_01045 [Edhazardia aedis USNM 41457]
Length = 208
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 55/122 (45%), Gaps = 10/122 (8%)
Query: 37 IVCYKCNNYGHFARECATESVT-CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
++CY+C GH R C T +++ C C+ +GH C + IIC NC GH C N
Sbjct: 71 LICYECGQTGHINRNCPTRNISICILCARKGHNKSTCPM---IICNNCYMCGHRTAQCKN 127
Query: 96 -DSSK--RCYACHQAGHMAKECPGQTAGKSPEPVVDMSL---TCYVCGHQGHLSYDCKLV 149
D+SK +C C A H ++CP E + L C C H DC+
Sbjct: 128 KDNSKHIQCRRCRGAEHSIRDCPAVWREYIVEGFENKPLKYKACPWCFSTEHFLDDCRKR 187
Query: 150 QK 151
QK
Sbjct: 188 QK 189
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 11/103 (10%)
Query: 50 RECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
R +++ CY C GH+ ++C ++ IC C GH CP CY C GH
Sbjct: 64 RRYFADTLICYECGQTGHINRNCPTRNISICILCARKGHNKSTCPMIICNNCYMC---GH 120
Query: 110 MAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLVQKS 152
+C + K + C C H DC V +
Sbjct: 121 RTAQCKNKDNSK--------HIQCRRCRGAEHSIRDCPAVWRE 155
>gi|299929817|gb|ADJ58116.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ I C+NC GH ARNC K C+ C + GH K+CP + A
Sbjct: 385 QKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCPERQA 429
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 15/82 (18%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMA----- 111
+ C+NC +GH+A++C C+ C GH ++CP QA +
Sbjct: 388 IKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCPE---------RQANFLGRFWPS 438
Query: 112 -KECPGQTAGKSPEPVVDMSLT 132
K PG PEP + T
Sbjct: 439 NKGRPGNFPQSRPEPTAPLEPT 460
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
I C+ C GH AR C A C+ C +GH KDC
Sbjct: 388 IKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDC 424
>gi|120885|sp|P17282.1|GAG_SIVCZ RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains:
RecName: Full=Matrix protein p17; Short=MA; Contains:
RecName: Full=Capsid protein p24; Short=CA; Contains:
RecName: Full=Spacer peptide p2; Contains: RecName:
Full=Nucleocapsid protein p7; Short=NC; Contains:
RecName: Full=Spacer peptide p1; Contains: RecName:
Full=p6-gag
gi|58867|emb|CAA36401.1| unnamed protein product [Simian immunodeficiency virus]
Length = 508
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
K I C+NC GH ARNC K C+ C Q GH K+C G+
Sbjct: 397 KRKIKCFNCGKEGHLARNCKAPRRKGCWRCGQEGHQMKDCTGR 439
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 32 GDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
G K I C+ C GH AR C A C+ C +GH KDCT
Sbjct: 395 GPKRKIKCFNCGKEGHLARNCKAPRRKGCWRCGQEGHQMKDCT 437
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
+ C+NC +GH+A++C C+ C GH ++C
Sbjct: 400 IKCFNCGKEGHLARNCKAPRRKGCWRCGQEGHQMKDC 436
>gi|388332020|gb|AFK29844.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ I C+NC GH ARNC K C+ C + GH K+C G+ A
Sbjct: 385 QRKIKCFNCGKEGHLARNCRAPRKKGCWKCGEEGHQMKDCTGRQA 429
Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKE 113
+ C+NC +GH+A++C C+ C GH ++C + + + H+
Sbjct: 388 IKCFNCGKEGHLARNCRAPRKKGCWKCGEEGHQMKDCTGRQANFLGKFWPSHKGR----- 442
Query: 114 CPGQTAGKSPEP 125
PG PEP
Sbjct: 443 -PGNFPQSRPEP 453
Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
I C+ C GH AR C A C+ C +GH KDCT
Sbjct: 388 IKCFNCGKEGHLARNCRAPRKKGCWKCGEEGHQMKDCT 425
>gi|144953372|gb|ABP04063.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ I C+NC GH ARNC K C+ C + GH K+C G+ A
Sbjct: 385 QKRIKCFNCGKEGHLARNCRAPRKKGCWKCGEEGHQMKDCTGRQA 429
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 16 GHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
GH Q + + +G K I C+ C GH AR C A C+ C +GH KDCT
Sbjct: 368 GHVQQAGIMMQRGNFKGQK-RIKCFNCGKEGHLARNCRAPRKKGCWKCGEEGHQMKDCT 425
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKE 113
+ C+NC +GH+A++C C+ C GH ++C + R + H+
Sbjct: 388 IKCFNCGKEGHLARNCRAPRKKGCWKCGEEGHQMKDCTGRQANFLGRFWPPHKGR----- 442
Query: 114 CPGQTAGKSPEP 125
PG PEP
Sbjct: 443 -PGNFLQSRPEP 453
>gi|145347243|ref|XP_001418083.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578311|gb|ABO96376.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1060
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 2 SSTSTIQCYNCFDFGHYQYSC--PQKSSADAR-GDKVGIVCYKCNNYGHFARECATESVT 58
+S S C C GH+ C P + R G K C +C GHFAR+C+ + T
Sbjct: 953 TSRSEDVCNRCGVKGHWAKDCLYPDNRPEELRPGPKPTDKCRRCGELGHFARDCSFDEDT 1012
Query: 59 CYNCSGQGHVAKDC 72
C C GH A+DC
Sbjct: 1013 CKICQQHGHRARDC 1026
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 24/92 (26%)
Query: 70 KDCTVKSSIICYNCNSSGHFARNC--PNDS----------SKRCYACHQAGHMAKECPGQ 117
+ T +S +C C GH+A++C P++ + +C C + GH A++C
Sbjct: 950 RKATSRSEDVCNRCGVKGHWAKDCLYPDNRPEELRPGPKPTDKCRRCGELGHFARDCSFD 1009
Query: 118 TAGKSPEPVVDMSLTCYVCGHQGHLSYDCKLV 149
TC +C GH + DC V
Sbjct: 1010 ED------------TCKICQQHGHRARDCPSV 1029
>gi|117643971|gb|ABK51662.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K I C+NC GH ARNC K C+ C + GH K+CP + A
Sbjct: 384 KRIIKCFNCGKEGHIARNCRAPRKKGCWKCGREGHQMKDCPERQA 428
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 15/75 (20%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC-- 114
+ C+NC +GH+A++C C+ C GH ++CP QA + K
Sbjct: 387 IKCFNCGKEGHIARNCRAPRKKGCWKCGREGHQMKDCPE---------RQANFLGKVWPS 437
Query: 115 ----PGQTAGKSPEP 125
PG PEP
Sbjct: 438 NKGRPGNFLQSRPEP 452
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
+G K I C+ C GH AR C A C+ C +GH KDC
Sbjct: 381 KGTKRIIKCFNCGKEGHIARNCRAPRKKGCWKCGREGHQMKDC 423
>gi|358347725|ref|XP_003637905.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355503840|gb|AES85043.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 358
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 37 IVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARNC-- 93
+ C+KC + GH+A +C + TC+ C GH A DC V I CYNC GH + C
Sbjct: 51 VKCFKCGSMGHYASDCKND-FTCHKCGKAGHKAADCRGVAREITCYNCGEKGHISTKCTK 109
Query: 94 PNDSSKRCYACH 105
P ++ + +A +
Sbjct: 110 PKKAAGKVFALN 121
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 12/77 (15%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
+ + C+ C S GH+A +C ND + C+ C +AGH A +C G V +TCY
Sbjct: 49 ADVKCFKCGSMGHYASDCKNDFT--CHKCGKAGHKAADCRG----------VAREITCYN 96
Query: 136 CGHQGHLSYDCKLVQKS 152
CG +GH+S C +K+
Sbjct: 97 CGEKGHISTKCTKPKKA 113
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCY 60
S + ++C+ C GHY C K C+KC GH A +C +TCY
Sbjct: 47 SLADVKCFKCGSMGHYASDC-----------KNDFTCHKCGKAGHKAADCRGVAREITCY 95
Query: 61 NCSGQGHVAKDCT 73
NC +GH++ CT
Sbjct: 96 NCGEKGHISTKCT 108
>gi|227057956|gb|ACP18938.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A E+++ N S K ++ C+NC GH ARNC
Sbjct: 350 CQGVGGPGHKARVLA-EAMSQANASVMVQRGNFKGPKRTVKCFNCGKEGHIARNCRAPRK 408
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C Q GH K+C + A
Sbjct: 409 KGCWKCGQEGHQMKDCNERQA 429
Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
+G K + C+ C GH AR C A C+ C +GH KDC + +
Sbjct: 382 KGPKRTVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCNERQA 429
>gi|195494989|ref|XP_002095076.1| GE19880 [Drosophila yakuba]
gi|194181177|gb|EDW94788.1| GE19880 [Drosophila yakuba]
Length = 1627
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 14/95 (14%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSG 64
S +C NCF+ GH + CP+ +VC+ C GH C + C+ C
Sbjct: 750 SHAKCTNCFEMGHVRSKCPRPRKP--------LVCFLCGTVGHAEPRCP--NAICFGCGS 799
Query: 65 QGHV----AKDCTVKSSIICYNCNSSGHFARNCPN 95
+ C+ S ++C C GH +CP+
Sbjct: 800 KQETYVQQCNKCSFHSRLVCQLCKMRGHGVDHCPD 834
>gi|299930119|gb|ADJ58267.1| gag protein [Human immunodeficiency virus 1]
Length = 504
Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ I C+NC GH ARNC K C+ C + GH K+CP + A
Sbjct: 385 QKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCPERQA 429
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
+ C+NC +GH+A++C C+ C GH ++CP
Sbjct: 388 IKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCP 425
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
I C+ C GH AR C A C+ C +GH KDC
Sbjct: 388 IKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDC 424
>gi|255986606|gb|ACU50686.1| gag protein [Human immunodeficiency virus 1]
Length = 504
Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
C+NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 395 CFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTGRQA 434
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKE 113
V C+NC +GH+A++C C+ C GH ++C + + + H+
Sbjct: 393 VKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTGRQANFLGKIWPSHKGR----- 447
Query: 114 CPGQTAGKSPEP 125
PG PEP
Sbjct: 448 -PGNFLQSRPEP 458
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
R + + C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 387 RNQRKIVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTGRQA 434
>gi|166025718|gb|ABY78169.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ ++ C+NC GH ARNC K C+ C + GH K+CP + A
Sbjct: 387 RKAVKCFNCGKDGHIARNCRAPRKKGCWKCGKEGHQMKDCPERQA 431
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
Query: 46 GHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCY 102
G+F + ++V C+NC GH+A++C C+ C GH ++CP + + +
Sbjct: 381 GNFXNQ--RKAVKCFNCGKDGHIARNCRAPRKKGCWKCGKEGHQMKDCPERQANFLGKIW 438
Query: 103 ACHQAGHMAKECPGQTAGKSPEP 125
H+ PG PEP
Sbjct: 439 PSHKGR------PGNFLQSRPEP 455
Score = 39.3 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 36 GIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
+ C+ C GH AR C A C+ C +GH KDC
Sbjct: 389 AVKCFNCGKDGHIARNCRAPRKKGCWKCGKEGHQMKDC 426
>gi|300720579|gb|ADK33358.1| truncated gag protein [Human immunodeficiency virus 1]
Length = 493
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K +I C+NC GH ARNC K C+ C Q GH K+C + A
Sbjct: 382 KRTIKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKDCTERQA 426
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K I C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 376 SNFKGTKRTIKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKDCTERQA 426
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
++ C+NC +GH+A++C C+ C GH ++C
Sbjct: 384 TIKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKDC 421
>gi|226475472|emb|CAX77789.1| cellular nucleic acid-binding protein [Schistosoma japonicum]
Length = 155
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 65/158 (41%), Gaps = 57/158 (36%)
Query: 39 CYKCNNYGHFARECATESV----------------------------TCYNCSGQGHVAK 70
C+KC GHFAR+C +S C+NC G GH A+
Sbjct: 5 CFKCGREGHFARDCQAQSRGGRGGGGGYRGRGGGGGRDRDNNDGRRDKCFNCGGVGHFAR 64
Query: 71 DCT---------------VKSSIICYNCNSSGHFARNCP----NDSSK-RCYACHQAGHM 110
+CT CYNC SGH RNCP ND S+ CY C++ GH
Sbjct: 65 ECTNDGQRGDSGYNNGGGGGGGGRCYNCGQSGHVVRNCPSNNRNDMSEILCYRCNKYGHY 124
Query: 111 AKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCKL 148
AKEC ++ G P+ CY C GH++ C +
Sbjct: 125 AKECT-ESGGSGPQ--------CYKCRGYGHIASRCNV 153
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 16 GHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVT---CYNCSGQGHVAKDC 72
GH +CP ++ R D I+CY+CN YGH+A+EC + CY C G GH+A C
Sbjct: 96 GHVVRNCP----SNNRNDMSEILCYRCNKYGHYAKECTESGGSGPQCYKCRGYGHIASRC 151
Query: 73 TVKS 76
V++
Sbjct: 152 NVEA 155
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 2 SSTSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATES 56
+ S I CY C +GHY C + + G CYKC YGH A C E+
Sbjct: 108 NDMSEILCYRCNKYGHYAKECTESGGS-------GPQCYKCRGYGHIASRCNVEA 155
>gi|45360169|gb|AAS59204.1| gag protein [Human immunodeficiency virus 1]
Length = 491
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ ++ C+NC GH ARNC K C+ C + GH K+CP + A
Sbjct: 382 RRTVKCFNCGREGHIARNCRAPRKKGCWKCGREGHQMKDCPERQA 426
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
+V C+NC +GH+A++C C+ C GH ++CP
Sbjct: 384 TVKCFNCGREGHIARNCRAPRKKGCWKCGREGHQMKDCP 422
Score = 41.6 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
+G + + C+ C GH AR C A C+ C +GH KDC
Sbjct: 379 KGQRRTVKCFNCGREGHIARNCRAPRKKGCWKCGREGHQMKDC 421
>gi|299929735|gb|ADJ58075.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 78 IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
I C+NC GH ARNC K C+ C + GH K+C G+ A
Sbjct: 388 IKCFNCGKEGHLARNCRAPRKKGCWKCGEEGHQMKDCTGRQA 429
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 17 HYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
H Q++ + +G + I C+ C GH AR C A C+ C +GH KDCT
Sbjct: 369 HVQHANIMMQKGNFKGQR-RIKCFNCGKEGHLARNCRAPRKKGCWKCGEEGHQMKDCT 425
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 14/74 (18%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM-----A 111
+ C+NC +GH+A++C C+ C GH ++C QA + +
Sbjct: 388 IKCFNCGKEGHLARNCRAPRKKGCWKCGEEGHQMKDCTG---------RQANFLGKLWPS 438
Query: 112 KECPGQTAGKSPEP 125
K PG PEP
Sbjct: 439 KGRPGNFPQSRPEP 452
>gi|172044078|sp|O12158.2|POL_HV192 RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Spacer peptide p2; Contains:
RecName: Full=Nucleocapsid protein p7; Short=NC;
Contains: RecName: Full=Transframe peptide; Short=TF;
Contains: RecName: Full=p6-pol; Short=p6*; Contains:
RecName: Full=Protease; AltName: Full=PR; AltName:
Full=Retropepsin; Contains: RecName: Full=Reverse
transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1431
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARNCPNDS 97
C GH AR A E+++ N + +C K +I C+NC GH ARNC
Sbjct: 348 CQGVGGPGHKARVLA-EAMSKVNNTNIMMQRSNCKGPKRTIKCFNCGKEGHLARNCRAPR 406
Query: 98 SKRCYACHQAGHMAKECPGQTA 119
K C+ C + GH K+C + A
Sbjct: 407 KKGCWKCGKEGHQVKDCTERQA 428
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K I C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 378 SNCKGPKRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQVKDCTERQA 428
>gi|441468870|gb|AGC36797.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 34/81 (41%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A N + + K +I CYNC GH ARNC
Sbjct: 348 CQGVGGPGHKARVLAEAMSQVNNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNCRAPRK 407
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C + GH K+C + A
Sbjct: 408 KGCWKCGKEGHQMKDCTERQA 428
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K I CY C GH AR C A C+ C +GH KDCT + +
Sbjct: 378 SNFKGTKRTIKCYNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 428
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECP 115
C G GH A+ S + N++ + +KR CY C + GH+A+ C
Sbjct: 348 CQGVGGPGHKARVLAEAMSQV----NNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNC- 402
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++P C+ CG +GH DC
Sbjct: 403 -----RAPR-----KKGCWKCGKEGHQMKDC 423
>gi|348682102|gb|EGZ21918.1| hypothetical protein PHYSODRAFT_251378 [Phytophthora sojae]
Length = 367
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 37/140 (26%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGH 67
+C++C + GH C DK+ CY C GH + C ++ C NC GH
Sbjct: 237 KCFHCGEVGHMASVC--------MNDKLQPPCYYCALRGHQSWACP--NLPCTNCLQLGH 286
Query: 68 VAKDCTVKSSII--CYNCNSSGHFARNCPND-------------------------SSKR 100
+DC+ +S I C C +GH NC N+ + +
Sbjct: 287 QERDCSNRSLDIDPCSICGRAGHIEDNCDNNHTLDECDTYREPTATNFAARTASGRTVQT 346
Query: 101 CYACHQAGHMAKECPGQTAG 120
CY C++AGH+A ECP + G
Sbjct: 347 CYECNEAGHIAAECPVRLNG 366
>gi|343168838|gb|AEL96786.1| gag protein [Human immunodeficiency virus 1]
Length = 504
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ ++ C+NC GH ARNC K C+ C + GH K+CP + A
Sbjct: 391 RKTVKCFNCGREGHIARNCRAPRKKGCWKCGKEGHQMKDCPERQA 435
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMA 111
++V C+NC +GH+A++C C+ C GH ++CP + + + H+
Sbjct: 392 KTVKCFNCGREGHIARNCRAPRKKGCWKCGKEGHQMKDCPERQANFLGKIWPSHKGR--- 448
Query: 112 KECPGQTAGKSPEP 125
PG PEP
Sbjct: 449 ---PGNFLQNRPEP 459
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS-----IICYNCN 84
R + + C+ C GH AR C A C+ C +GH KDC + + I +
Sbjct: 388 RNPRKTVKCFNCGREGHIARNCRAPRKKGCWKCGKEGHQMKDCPERQANFLGKIWPSHKG 447
Query: 85 SSGHFARNCPNDSS 98
G+F +N P S+
Sbjct: 448 RPGNFLQNRPEPSA 461
>gi|441468963|gb|AGC36876.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 34/81 (41%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A N + + K +I CYNC GH ARNC
Sbjct: 348 CQGVGGPGHKARVLAEAMSQVNNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNCRAPRK 407
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C + GH K+C + A
Sbjct: 408 KGCWKCGKEGHQMKDCTERQA 428
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K I CY C GH AR C A C+ C +GH KDCT + +
Sbjct: 378 SNFKGTKRTIKCYNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 428
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECP 115
C G GH A+ S + N++ + +KR CY C + GH+A+ C
Sbjct: 348 CQGVGGPGHKARVLAEAMSQV----NNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNC- 402
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++P C+ CG +GH DC
Sbjct: 403 -----RAPR-----KKGCWKCGKEGHQMKDC 423
>gi|441468954|gb|AGC36868.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 34/81 (41%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A N + + K +I CYNC GH ARNC
Sbjct: 348 CQGVGGPGHKARVLAEAMSQVNNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNCRAPRK 407
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C + GH K+C + A
Sbjct: 408 KGCWKCGKEGHQMKDCTERQA 428
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K I CY C GH AR C A C+ C +GH KDCT + +
Sbjct: 378 SNFKGTKRTIKCYNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 428
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECP 115
C G GH A+ S + N++ + +KR CY C + GH+A+ C
Sbjct: 348 CQGVGGPGHKARVLAEAMSQV----NNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNC- 402
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++P C+ CG +GH DC
Sbjct: 403 -----RAPR-----KKGCWKCGKEGHQMKDC 423
>gi|441468886|gb|AGC36811.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 34/81 (41%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A N + + K +I CYNC GH ARNC
Sbjct: 348 CQGVGGPGHKARVLAEAMSQVNNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNCRAPRK 407
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C + GH K+C + A
Sbjct: 408 KGCWKCGKEGHQMKDCTERQA 428
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K I CY C GH AR C A C+ C +GH KDCT + +
Sbjct: 378 SNFKGTKRTIKCYNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 428
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECP 115
C G GH A+ S + N++ + +KR CY C + GH+A+ C
Sbjct: 348 CQGVGGPGHKARVLAEAMSQV----NNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNC- 402
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++P C+ CG +GH DC
Sbjct: 403 -----RAPR-----KKGCWKCGKEGHQMKDC 423
>gi|441468853|gb|AGC36782.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 34/81 (41%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A N + + K +I CYNC GH ARNC
Sbjct: 348 CQGVGGPGHKARVLAEAMSQVNNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNCRAPRK 407
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C + GH K+C + A
Sbjct: 408 KGCWKCGKEGHQMKDCTERQA 428
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K I CY C GH AR C A C+ C +GH KDCT + +
Sbjct: 378 SNFKGTKRTIKCYNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 428
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECP 115
C G GH A+ S + N++ + +KR CY C + GH+A+ C
Sbjct: 348 CQGVGGPGHKARVLAEAMSQV----NNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNC- 402
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++P C+ CG +GH DC
Sbjct: 403 -----RAPR-----KKGCWKCGKEGHQMKDC 423
>gi|164606272|gb|ABY62285.1| gag protein [Human immunodeficiency virus 1]
gi|283444863|gb|ADB20333.1| gag protein [Human immunodeficiency virus 1]
gi|441468826|gb|AGC36759.1| gag protein [Human immunodeficiency virus 1]
gi|441468878|gb|AGC36804.1| gag protein [Human immunodeficiency virus 1]
gi|441468895|gb|AGC36819.1| gag protein [Human immunodeficiency virus 1]
gi|441468904|gb|AGC36827.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 34/81 (41%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A N + + K +I CYNC GH ARNC
Sbjct: 348 CQGVGGPGHKARVLAEAMSQVNNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNCRAPRK 407
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C + GH K+C + A
Sbjct: 408 KGCWKCGKEGHQMKDCTERQA 428
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K I CY C GH AR C A C+ C +GH KDCT + +
Sbjct: 378 SNFKGTKRTIKCYNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 428
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECP 115
C G GH A+ S + N++ + +KR CY C + GH+A+ C
Sbjct: 348 CQGVGGPGHKARVLAEAMSQV----NNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNC- 402
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++P C+ CG +GH DC
Sbjct: 403 -----RAPR-----KKGCWKCGKEGHQMKDC 423
>gi|170088446|ref|XP_001875446.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650646|gb|EDR14887.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 644
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 13/81 (16%)
Query: 80 CYNCNSSGHFARNCPNDSSKR----CYACHQAGHMAKECP-----GQTAGKSPEPVVDMS 130
C C S+ HF CP + C C+ GH+ ++CP G T GK P+P
Sbjct: 321 CRRCESTEHFISECPERTKPPEGYVCKVCNTPGHLVRDCPTRDARGDTGGKKPKP----G 376
Query: 131 LTCYVCGHQGHLSYDCKLVQK 151
C CG + H DC + +
Sbjct: 377 YVCRACGSEEHYLEDCHVANQ 397
Score = 38.9 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 29/80 (36%), Gaps = 18/80 (22%)
Query: 8 QCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESV---------- 57
+C C H+ CP+++ G VC CN GH R+C T
Sbjct: 320 KCRRCESTEHFISECPERTKPPE-----GYVCKVCNTPGHLVRDCPTRDARGDTGGKKPK 374
Query: 58 ---TCYNCSGQGHVAKDCTV 74
C C + H +DC V
Sbjct: 375 PGYVCRACGSEEHYLEDCHV 394
>gi|441468981|gb|AGC36892.1| gag protein [Human immunodeficiency virus 1]
gi|441468990|gb|AGC36900.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 34/81 (41%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A N + + K +I CYNC GH ARNC
Sbjct: 348 CQGVGGPGHKARVLAEAMSQVNNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNCRAPRK 407
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C + GH K+C + A
Sbjct: 408 KGCWKCGKEGHQMKDCTERQA 428
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K I CY C GH AR C A C+ C +GH KDCT + +
Sbjct: 378 SNFKGTKRTIKCYNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 428
Score = 35.4 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECP 115
C G GH A+ S + N++ + +KR CY C + GH+A+ C
Sbjct: 348 CQGVGGPGHKARVLAEAMSQV----NNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNC- 402
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++P C+ CG +GH DC
Sbjct: 403 -----RAPR-----KKGCWKCGKEGHQMKDC 423
>gi|325634698|gb|ADZ32665.1| gag protein [Human immunodeficiency virus 1]
Length = 464
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
+ ++ C+NC GH ARNC K C+ C + GH K+C GQ
Sbjct: 389 RKAVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCEGQ 431
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
++V C+NC +GH+A++C C+ C GH ++C
Sbjct: 390 KAVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDC 428
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSSII 79
+ + + C+ C GH AR C A C+ C +GH KDC +++ +
Sbjct: 386 KNQRKAVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCEGQANFL 435
>gi|164606276|gb|ABY62287.1| gag protein [Human immunodeficiency virus 1]
gi|441468937|gb|AGC36853.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 34/81 (41%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A N + + K +I CYNC GH ARNC
Sbjct: 348 CQGVGGPGHKARVLAEAMSQVNNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNCRAPRK 407
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C + GH K+C + A
Sbjct: 408 KGCWKCGKEGHQMKDCTERQA 428
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K I CY C GH AR C A C+ C +GH KDCT + +
Sbjct: 378 SNFKGTKRTIKCYNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 428
Score = 35.4 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECP 115
C G GH A+ S + N++ + +KR CY C + GH+A+ C
Sbjct: 348 CQGVGGPGHKARVLAEAMSQV----NNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNC- 402
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++P C+ CG +GH DC
Sbjct: 403 -----RAPR-----KKGCWKCGKEGHQMKDC 423
>gi|62997607|gb|AAY24662.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K +I C+NC GH ARNC K C+ C Q GH K+C + A
Sbjct: 388 KRNIKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKDCTERQA 432
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 24 QKSSADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
QKS + RG K I C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 380 QKS--NFRGPKRNIKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKDCTERQA 432
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
++ C+NC +GH+A++C C+ C GH ++C
Sbjct: 390 NIKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKDC 427
>gi|213137585|gb|ACJ44474.1| gag protein [Human immunodeficiency virus 1]
Length = 469
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 74 VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+K S+ C+NC GH ARNC K C+ C + GH K+C + A
Sbjct: 359 IKRSVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCTERQA 404
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 9/73 (12%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAK 112
SV C+NC +GH+A++C C+ C GH ++C + + + H+
Sbjct: 362 SVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGR---- 417
Query: 113 ECPGQTAGKSPEP 125
PG PEP
Sbjct: 418 --PGNFLQSRPEP 428
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K + C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 354 SNFKGIKRSVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCTERQA 404
>gi|441468999|gb|AGC36908.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 34/81 (41%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A N + + K +I CYNC GH ARNC
Sbjct: 348 CQGVGGPGHKARVLAEAMSQVNNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNCRAPRK 407
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C + GH K+C + A
Sbjct: 408 KGCWKCGKEGHQMKDCTERQA 428
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K I CY C GH AR C A C+ C +GH KDCT + +
Sbjct: 378 SNFKGTKRTIKCYNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 428
Score = 35.4 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECP 115
C G GH A+ S + N++ + +KR CY C + GH+A+ C
Sbjct: 348 CQGVGGPGHKARVLAEAMSQV----NNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNC- 402
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++P C+ CG +GH DC
Sbjct: 403 -----RAPR-----KKGCWKCGKEGHQMKDC 423
>gi|441468761|gb|AGC36702.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 34/81 (41%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A N + + K +I CYNC GH ARNC
Sbjct: 348 CQGVGGPGHKARVLAEAMSQVNNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNCRAPRK 407
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C + GH K+C + A
Sbjct: 408 KGCWKCGKEGHQMKDCTERQA 428
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K I CY C GH AR C A C+ C +GH KDCT + +
Sbjct: 378 SNFKGTKRTIKCYNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 428
Score = 35.4 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECP 115
C G GH A+ S + N++ + +KR CY C + GH+A+ C
Sbjct: 348 CQGVGGPGHKARVLAEAMSQV----NNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNC- 402
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++P C+ CG +GH DC
Sbjct: 403 -----RAPR-----KKGCWKCGKEGHQMKDC 423
>gi|441469027|gb|AGC36933.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 34/81 (41%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A N + + K +I CYNC GH ARNC
Sbjct: 348 CQGVGGPGHKARVLAEAMSQVNNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNCRAPRK 407
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C + GH K+C + A
Sbjct: 408 KGCWKCGKEGHQMKDCTERQA 428
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K I CY C GH AR C A C+ C +GH KDCT + +
Sbjct: 378 SNFKGTKRTIKCYNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 428
Score = 35.4 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECP 115
C G GH A+ S + N++ + +KR CY C + GH+A+ C
Sbjct: 348 CQGVGGPGHKARVLAEAMSQV----NNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNC- 402
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++P C+ CG +GH DC
Sbjct: 403 -----RAPR-----KKGCWKCGKEGHQMKDC 423
>gi|32812032|gb|AAP87969.1| gag protein [Human immunodeficiency virus 1]
Length = 491
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 18/69 (26%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC------------------PG 116
+ S+ C+NC GH ARNC K C+ C Q GH K+C PG
Sbjct: 382 RRSVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTERQANFLGKIWPSHKGRPG 441
Query: 117 QTAGKSPEP 125
+ PEP
Sbjct: 442 NSLQSRPEP 450
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G + + C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 376 SNFKGPRRSVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTERQA 426
>gi|110815940|sp|Q77373.3|POL_HV1AN RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Spacer peptide p2; Contains:
RecName: Full=Nucleocapsid protein p7; Short=NC;
Contains: RecName: Full=Transframe peptide; Short=TF;
Contains: RecName: Full=p6-pol; Short=p6*; Contains:
RecName: Full=Protease; AltName: Full=PR; AltName:
Full=Retropepsin; Contains: RecName: Full=Reverse
transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1435
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
K +I C+NC GH ARNC K C+ C Q GH K+C
Sbjct: 391 KGTIKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDC 430
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
++ C+NC +GH+A++C C+ C GH ++C N GH A++
Sbjct: 393 TIKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCRNGKQFFRQILASGGHEARQLC 452
Query: 116 GQTA 119
+T+
Sbjct: 453 AETS 456
>gi|290466022|gb|ADD25364.1| gag protein [Human immunodeficiency virus 1]
Length = 507
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 74 VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
++ +I C+NC GH ARNC K C+ C Q GH K+C
Sbjct: 389 IRKTIKCFNCGKEGHLARNCKAPRRKGCWKCGQEGHQMKDC 429
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 26/45 (57%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK 99
+++ C+NC +GH+A++C C+ C GH ++C N+ +
Sbjct: 391 KTIKCFNCGKEGHLARNCKAPRRKGCWKCGQEGHQMKDCNNEGRQ 435
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
+G + I C+ C GH AR C A C+ C +GH KDC
Sbjct: 387 KGIRKTIKCFNCGKEGHLARNCKAPRRKGCWKCGQEGHQMKDC 429
>gi|451170359|gb|AGF32778.1| gag protein [Human immunodeficiency virus 1]
Length = 506
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 33/81 (40%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A N + + S+ C+NC GH ARNC
Sbjct: 350 CQGVGGPGHKARVLAEAMSQATNTAIMMQRGNFRNQRKSVKCFNCGKEGHIARNCRAPRK 409
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C Q GH K+C + A
Sbjct: 410 KGCWKCGQEGHQMKDCTERQA 430
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
R + + C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 383 RNQRKSVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTERQA 430
>gi|259125008|gb|ACV93579.1| gag protein [Human immunodeficiency virus 1]
gi|259125034|gb|ACV93591.1| gag protein [Human immunodeficiency virus 1]
gi|259125051|gb|ACV93598.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ I C+NC GH ARNC K C+ C + GH K+C G+ A
Sbjct: 384 QKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTGRQA 428
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
RG K I C+ C GH AR C A C+ C +GH KDCT
Sbjct: 382 RGQK-RIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCT 424
Score = 42.7 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
+ C+NC +GH+A++C C+ C GH ++C + ++ + +K PG
Sbjct: 387 IKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDC---TGRQANFLGKIWPSSKGRPG 443
Query: 117 QTAGKSPEP 125
PEP
Sbjct: 444 NFLQSRPEP 452
>gi|8920375|emb|CAB96408.1| gag polyprotein [Simian immunodeficiency virus]
Length = 502
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 22/41 (53%)
Query: 74 VKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
V I CYNC GH ARNC K C+ C Q GH KEC
Sbjct: 385 VNKKIKCYNCGKEGHVARNCRAPRRKGCWKCGQEGHNMKEC 425
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
+ + CYNC +GHVA++C C+ C GH + C
Sbjct: 387 KKIKCYNCGKEGHVARNCRAPRRKGCWKCGQEGHNMKEC 425
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
I CY C GH AR C A C+ C +GH K+CT
Sbjct: 389 IKCYNCGKEGHVARNCRAPRRKGCWKCGQEGHNMKECT 426
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 14/88 (15%)
Query: 62 CSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN---DSSKRCYACHQAGHMAKECPGQT 118
C G G A V + + NSS F + N + +CY C + GH+A+ C
Sbjct: 349 CQGVGGPAHKARVLAEAMSQVQNSSNVFMQRGNNGRVNKKIKCYNCGKEGHVARNC---- 404
Query: 119 AGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++P C+ CG +GH +C
Sbjct: 405 --RAPR-----RKGCWKCGQEGHNMKEC 425
>gi|112497951|gb|ABI20347.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ ++ C+NC GH ARNC K C+ C + GH K+C G+ A
Sbjct: 390 RKTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCDGRQA 434
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 15/77 (19%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
++V C+NC +GH+A++C C+ C GH ++C QA + K
Sbjct: 391 KTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCDG---------RQANFLGKIW 441
Query: 115 PGQTA------GKSPEP 125
P Q PEP
Sbjct: 442 PSQKGRPGNFLQSRPEP 458
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
R + + C+ C GH AR C A C+ C +GH KDC
Sbjct: 387 RNQRKTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDC 429
>gi|238634301|gb|ACR52163.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K +I C+NC GH ARNC K C+ C + GH KEC + A
Sbjct: 386 KRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
R K I C+ C GH AR C A C+ C +GH K+CT + +
Sbjct: 383 RNQKRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
++ C+NC +GH+A++C C+ C GH + C
Sbjct: 388 TIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKEC 425
>gi|112497941|gb|ABI20338.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ ++ C+NC GH ARNC K C+ C + GH K+C G+ A
Sbjct: 390 RKTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCDGRQA 434
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 15/77 (19%)
Query: 55 ESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKEC 114
++V C+NC +GH+A++C C+ C GH ++C QA + K
Sbjct: 391 KTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCDG---------RQANFLGKIW 441
Query: 115 PGQTA------GKSPEP 125
P Q PEP
Sbjct: 442 PSQKGRPGNFLQSRPEP 458
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
R + + C+ C GH AR C A C+ C +GH KDC
Sbjct: 387 RNQRKTVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDC 429
>gi|357436173|ref|XP_003588362.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355477410|gb|AES58613.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 424
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 37 IVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARNC-- 93
+ C+KC + GH+A +C + TC+ C GH A DC V I CYNC GH + C
Sbjct: 113 VKCFKCGSMGHYASDCKND-FTCHKCGKAGHKAADCRGVAREITCYNCGEKGHISTKCTK 171
Query: 94 PNDSSKRCYACH 105
P ++ + +A +
Sbjct: 172 PKKAAGKVFALN 183
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 12/77 (15%)
Query: 76 SSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYV 135
+ + C+ C S GH+A +C ND + C+ C +AGH A +C G V +TCY
Sbjct: 111 ADVKCFKCGSMGHYASDCKNDFT--CHKCGKAGHKAADCRG----------VAREITCYN 158
Query: 136 CGHQGHLSYDCKLVQKS 152
CG +GH+S C +K+
Sbjct: 159 CGEKGHISTKCTKPKKA 175
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 3 STSTIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC--ATESVTCY 60
S + ++C+ C GHY C K C+KC GH A +C +TCY
Sbjct: 109 SLADVKCFKCGSMGHYASDC-----------KNDFTCHKCGKAGHKAADCRGVAREITCY 157
Query: 61 NCSGQGHVAKDCT 73
NC +GH++ CT
Sbjct: 158 NCGEKGHISTKCT 170
>gi|326653945|gb|AEA02843.1| gag protein [Human immunodeficiency virus 1]
Length = 491
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ ++ C+NC GH ARNC K C+ C + GH K+C G+ A
Sbjct: 382 RRTVKCFNCGKEGHIARNCRAPRKKGCWKCGEEGHQMKDCNGRQA 426
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 9/73 (12%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAK 112
+V C+NC +GH+A++C C+ C GH ++C + + + H+
Sbjct: 384 TVKCFNCGKEGHIARNCRAPRKKGCWKCGEEGHQMKDCNGRQANFLGKIWPSHKGR---- 439
Query: 113 ECPGQTAGKSPEP 125
PG PEP
Sbjct: 440 --PGNFLQNRPEP 450
Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS-----IICYNCN 84
+G + + C+ C GH AR C A C+ C +GH KDC + + I +
Sbjct: 379 KGPRRTVKCFNCGKEGHIARNCRAPRKKGCWKCGEEGHQMKDCNGRQANFLGKIWPSHKG 438
Query: 85 SSGHFARNCPNDSS 98
G+F +N P S+
Sbjct: 439 RPGNFLQNRPEPSA 452
>gi|55416399|gb|AAV50163.1| gag protein [Human immunodeficiency virus 1]
Length = 467
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
+ I C+NC GH ARNC K C+ C + GH K+CP +
Sbjct: 375 QKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCPNE 417
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
+ C+NC +GH+A++C C+ C GH ++CPN+ ++ + +K PG
Sbjct: 378 IKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCPNE--RQANFLGKIWPSSKGRPG 435
Query: 117 QTAGKSPEP 125
PEP
Sbjct: 436 NFPQSRPEP 444
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
RG K I C+ C GH AR C A C+ C +GH KDC
Sbjct: 373 RGQK-RIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDC 414
>gi|441468972|gb|AGC36884.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 34/81 (41%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A N + + K +I CYNC GH ARNC
Sbjct: 348 CQGVGGPGHKARVLAEAMSQVNNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNCRAPRK 407
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C + GH K+C + A
Sbjct: 408 KGCWKCGKEGHQMKDCTERRA 428
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K I CY C GH AR C A C+ C +GH KDCT + +
Sbjct: 378 SNFKGTKRTIKCYNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERRA 428
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
Query: 59 CYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR---CYACHQAGHMAKECP 115
C G GH A+ S + N++ + +KR CY C + GH+A+ C
Sbjct: 348 CQGVGGPGHKARVLAEAMSQV----NNNAIMMQRSNFKGTKRTIKCYNCGKEGHLARNC- 402
Query: 116 GQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
++P C+ CG +GH DC
Sbjct: 403 -----RAPR-----KKGCWKCGKEGHQMKDC 423
>gi|300720390|gb|ADK33232.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 34/81 (41%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A N + + K S+ C+NC GH ARNC
Sbjct: 347 CQGVGGPGHKARVLAEAMSQVNNANIMMQXSNFKGXKRSVKCFNCGKEGHIARNCRAPRK 406
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C + GH K+C + A
Sbjct: 407 KGCWKCGKEGHQMKDCTERQA 427
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K + C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 377 SNFKGXKRSVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCTERQA 427
>gi|110815948|sp|Q9Q720.3|POL_HV1V9 RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Spacer peptide p2; Contains:
RecName: Full=Nucleocapsid protein p7; Short=NC;
Contains: RecName: Full=Transframe peptide; Short=TF;
Contains: RecName: Full=p6-pol; Short=p6*; Contains:
RecName: Full=Protease; AltName: Full=PR; AltName:
Full=Retropepsin; Contains: RecName: Full=Reverse
transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1436
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ ++ C NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 390 RRTVKCSNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTGRQA 434
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK--RCYACHQAGHMAKE 113
+V C NC +GH+A++C C+ C GH ++C + R Q G +
Sbjct: 392 TVKCSNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTGRQANFFRENLAFQQGKAREF 451
Query: 114 CPGQTAGKSP 123
P + SP
Sbjct: 452 PPEEARANSP 461
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
+G + + C C GH AR C A C+ C +GH KDCT
Sbjct: 387 KGPRRTVKCSNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCT 430
>gi|75665476|sp|Q9Q721.3|GAG_HV1V9 RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains:
RecName: Full=Matrix protein p17; Short=MA; Contains:
RecName: Full=Capsid protein p24; Short=CA; Contains:
RecName: Full=Spacer peptide p2; Contains: RecName:
Full=Nucleocapsid protein p7; Short=NC; Contains:
RecName: Full=Spacer peptide p1; Contains: RecName:
Full=p6-gag
gi|6580984|gb|AAF18393.1|AF190127_1 Gag polyprotein [Human immunodeficiency virus 1]
Length = 498
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ ++ C NC GH ARNC K C+ C Q GH K+C G+ A
Sbjct: 390 RRTVKCSNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTGRQA 434
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
+G + + C C GH AR C A C+ C +GH KDCT
Sbjct: 387 KGPRRTVKCSNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCT 430
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
+V C NC +GH+A++C C+ C GH ++C
Sbjct: 392 TVKCSNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDC 429
>gi|82571309|gb|ABB84076.1| gag protein [Human immunodeficiency virus 1]
Length = 491
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A E+++ N S + K + C+NC GH ARNC
Sbjct: 347 CQGVGGPGHKARVLA-EAMSQANTSVLMQRSNFKGAKRIVKCFNCGKEGHIARNCRAPRK 405
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C Q GH K+C + A
Sbjct: 406 KGCWKCGQEGHQMKDCTERQA 426
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K + C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 376 SNFKGAKRIVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTERQA 426
>gi|410585682|gb|AFV74122.1| gag protein [Human immunodeficiency virus]
Length = 494
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 14/101 (13%)
Query: 28 ADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSG 87
A+A G + + NN+ F R V C+NC +GH+A++C C+ C G
Sbjct: 364 AEAMGQTNAAIMMQRNNFKGFKR-----IVKCFNCGKEGHIARNCRAPRKKGCWKCGKEG 418
Query: 88 HFARNCPNDSSK---RCYACHQAGHMAKECPGQTAGKSPEP 125
H ++C + + + H KE PG PEP
Sbjct: 419 HQMKDCTERQANFLGKIWPVH------KERPGNFLQSRPEP 453
>gi|238733888|gb|ACR55157.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 43 NNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCY 102
NN+ F R +V C+NC +GH+AK+C C+NC GH ++C + ++
Sbjct: 378 NNFKGFKR-----TVKCFNCGKEGHIAKNCRAPRKKGCWNCGKEGHQMKDC---TERQAN 429
Query: 103 ACHQAGHMAKECPGQTAGKSPEPVVDMSLT 132
+ +K PG PEP + T
Sbjct: 430 FLGKIWPSSKGRPGNFLQSRPEPTAPLEPT 459
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
+G K + C+ C GH A+ C A C+NC +GH KDCT + +
Sbjct: 381 KGFKRTVKCFNCGKEGHIAKNCRAPRKKGCWNCGKEGHQMKDCTERQA 428
>gi|238634512|gb|ACR52342.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K +I C+NC GH ARNC K C+ C + GH KEC + A
Sbjct: 386 KRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 42.7 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
R K I C+ C GH AR C A C+ C +GH K+CT + +
Sbjct: 383 RNQKRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
++ C+NC +GH+A++C C+ C GH + C
Sbjct: 388 TIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKEC 425
>gi|238634306|gb|ACR52166.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K +I C+NC GH ARNC K C+ C + GH KEC + A
Sbjct: 386 KRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 42.7 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
R K I C+ C GH AR C A C+ C +GH K+CT + +
Sbjct: 383 RNQKRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
++ C+NC +GH+A++C C+ C GH + C
Sbjct: 388 TIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKEC 425
>gi|238632979|gb|ACR51083.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K +I C+NC GH ARNC K C+ C + GH KEC + A
Sbjct: 386 KRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 42.7 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
R K I C+ C GH AR C A C+ C +GH K+CT + +
Sbjct: 383 RNQKRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
++ C+NC +GH+A++C C+ C GH + C
Sbjct: 388 TIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKEC 425
>gi|41052630|dbj|BAD08139.1| putative Glycine-rich protein 2 [Oryza sativa Japonica Group]
gi|41052743|dbj|BAD07599.1| putative Glycine-rich protein 2 [Oryza sativa Japonica Group]
gi|125580606|gb|EAZ21537.1| hypothetical protein OsJ_05164 [Oryza sativa Japonica Group]
gi|187609561|gb|ACD13288.1| cold shock domain protein 1 [Oryza sativa Japonica Group]
gi|215767546|dbj|BAG99774.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 241
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 45/114 (39%), Gaps = 38/114 (33%)
Query: 39 CYKCNNYGHFAREC---------------ATESVTCYNCSGQGHVAKDC----------- 72
C+KC GH AR+C C+ C GH+A+DC
Sbjct: 126 CFKCGESGHMARDCFNGGGVGVGGGGGGGGGAGGGCFKCGEMGHMARDCFNSGGGGGGGG 185
Query: 73 TVKSSIICYNCNSSGHFARNCPN------------DSSKRCYACHQAGHMAKEC 114
CYNC +GH AR+C N + CY C +AGH+A++C
Sbjct: 186 GGGGGGACYNCGETGHLARDCYNGGGGGGGGRFGGGGDRSCYNCGEAGHIARDC 239
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 33/81 (40%), Gaps = 14/81 (17%)
Query: 80 CYNCNSSGHFARNCPNDSSKR--------------CYACHQAGHMAKECPGQTAGKSPEP 125
C+ C SGH AR+C N C+ C + GHMA++C G
Sbjct: 126 CFKCGESGHMARDCFNGGGVGVGGGGGGGGGAGGGCFKCGEMGHMARDCFNSGGGGGGGG 185
Query: 126 VVDMSLTCYVCGHQGHLSYDC 146
CY CG GHL+ DC
Sbjct: 186 GGGGGGACYNCGETGHLARDC 206
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 45/114 (39%), Gaps = 26/114 (22%)
Query: 59 CYNCSGQGHVAKDC--------------TVKSSIICYNCNSSGHFARNCPNDSSKR---- 100
C+ C GH+A+DC + C+ C GH AR+C N
Sbjct: 126 CFKCGESGHMARDCFNGGGVGVGGGGGGGGGAGGGCFKCGEMGHMARDCFNSGGGGGGGG 185
Query: 101 -------CYACHQAGHMAKEC-PGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
CY C + GH+A++C G G +CY CG GH++ DC
Sbjct: 186 GGGGGGACYNCGETGHLARDCYNGGGGGGGGRFGGGGDRSCYNCGEAGHIARDC 239
>gi|374349519|gb|AEZ35368.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 490
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K + C+NC GH A+NC K C+ C Q GH K+C G+ A
Sbjct: 378 KRIVKCFNCGKEGHIAKNCRAPRKKGCWKCGQEGHQMKDCTGRQA 422
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKE 113
V C+NC +GH+AK+C C+ C GH ++C + + + H+
Sbjct: 381 VKCFNCGKEGHIAKNCRAPRKKGCWKCGQEGHQMKDCTGRQANFLGKIWPSHKGR----- 435
Query: 114 CPGQTAGKSPEP 125
PG PEP
Sbjct: 436 -PGNFLQSRPEP 446
Score = 42.4 bits (98), Expect = 0.070, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
++ +G K + C+ C GH A+ C A C+ C +GH KDCT
Sbjct: 372 SNFKGPKRIVKCFNCGKEGHIAKNCRAPRKKGCWKCGQEGHQMKDCT 418
>gi|238635552|gb|ACR52790.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K +I C+NC GH ARNC K C+ C + GH KEC + A
Sbjct: 386 KRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
R K I C+ C GH AR C A C+ C +GH K+CT + +
Sbjct: 383 RNQKRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
++ C+NC +GH+A++C C+ C GH + C
Sbjct: 388 TIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKEC 425
>gi|238634289|gb|ACR52155.1| gag protein [Human immunodeficiency virus 1]
gi|238634292|gb|ACR52157.1| gag protein [Human immunodeficiency virus 1]
gi|238634298|gb|ACR52161.1| gag protein [Human immunodeficiency virus 1]
gi|238634303|gb|ACR52164.1| gag protein [Human immunodeficiency virus 1]
gi|238634309|gb|ACR52168.1| gag protein [Human immunodeficiency virus 1]
gi|238634312|gb|ACR52170.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K +I C+NC GH ARNC K C+ C + GH KEC + A
Sbjct: 386 KRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
R K I C+ C GH AR C A C+ C +GH K+CT + +
Sbjct: 383 RNQKRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
++ C+NC +GH+A++C C+ C GH + C
Sbjct: 388 TIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKEC 425
>gi|238634242|gb|ACR52116.1| gag protein [Human immunodeficiency virus 1]
gi|238634248|gb|ACR52120.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K +I C+NC GH ARNC K C+ C + GH KEC + A
Sbjct: 386 KRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
R K I C+ C GH AR C A C+ C +GH K+CT + +
Sbjct: 383 RNQKRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
++ C+NC +GH+A++C C+ C GH + C
Sbjct: 388 TIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKEC 425
>gi|238632967|gb|ACR51075.1| gag protein [Human immunodeficiency virus 1]
gi|238632970|gb|ACR51077.1| gag protein [Human immunodeficiency virus 1]
gi|238632982|gb|ACR51085.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K +I C+NC GH ARNC K C+ C + GH KEC + A
Sbjct: 386 KRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
R K I C+ C GH AR C A C+ C +GH K+CT + +
Sbjct: 383 RNQKRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
++ C+NC +GH+A++C C+ C GH + C
Sbjct: 388 TIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKEC 425
>gi|303283546|ref|XP_003061064.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457415|gb|EEH54714.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 496
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 5 STIQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSG 64
+ ++C C D H+ CP + C C GH + C TC+ C
Sbjct: 394 AVVECPKCGDPSHHVSRCPLAN------------CRSCGRSGHLSGACP--DATCFRCGK 439
Query: 65 QGHVAKDCTVKS--SIICYNCNSSGHFARNCPNDSSKRCYACHQAGH 109
+GH ++ C + S C C S HF R+CP+ C+ C + GH
Sbjct: 440 RGHESRFCRERPNPSSGCLQCGSREHFLRDCPDVG---CFHCGEFGH 483
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 15/90 (16%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
V C C H C + + C +C SGH + CP+ + C+ C + GH ++ C
Sbjct: 396 VECPKCGDPSHHVSRCPLAN---CRSCGRSGHLSGACPDAT---CFRCGKRGHESRFCR- 448
Query: 117 QTAGKSPEPVVDMSLTCYVCGHQGHLSYDC 146
+ P P S C CG + H DC
Sbjct: 449 ----ERPNP----SSGCLQCGSREHFLRDC 470
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQ 139
C C H CP C +C ++GH++ CP TC+ CG +
Sbjct: 398 CPKCGDPSHHVSRCP---LANCRSCGRSGHLSGACP--------------DATCFRCGKR 440
Query: 140 GHLSYDCK 147
GH S C+
Sbjct: 441 GHESRFCR 448
>gi|407734435|gb|AFU28020.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ I C+NC GH ARNC K C+ C + GH K+CP + A
Sbjct: 385 QKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKDGHQMKDCPERQA 429
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCP 94
+ C+NC +GH+A++C C+ C GH ++CP
Sbjct: 388 IKCFNCGKEGHLARNCRAPRKKGCWKCGKDGHQMKDCP 425
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
I C+ C GH AR C A C+ C GH KDC
Sbjct: 388 IKCFNCGKEGHLARNCRAPRKKGCWKCGKDGHQMKDC 424
>gi|299930185|gb|ADJ58300.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 78 IICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
I C+NC GH ARNC K C+ C + GH K+C G+ A
Sbjct: 388 IKCFNCGKEGHLARNCRAPRKKGCWKCGEEGHQMKDCTGRQA 429
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 17 HYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCT 73
H Q++ + +G + I C+ C GH AR C A C+ C +GH KDCT
Sbjct: 369 HVQHANIMMQKGNFKGQR-RIKCFNCGKEGHLARNCRAPRKKGCWKCGEEGHQMKDCT 425
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 14/74 (18%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHM-----A 111
+ C+NC +GH+A++C C+ C GH ++C QA + +
Sbjct: 388 IKCFNCGKEGHLARNCRAPRKKGCWKCGEEGHQMKDCTG---------RQANFLGKLWPS 438
Query: 112 KECPGQTAGKSPEP 125
K PG PEP
Sbjct: 439 KGRPGNFPQSRPEP 452
>gi|238634295|gb|ACR52159.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K +I C+NC GH ARNC K C+ C + GH KEC + A
Sbjct: 386 KRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
R K I C+ C GH AR C A C+ C +GH K+CT + +
Sbjct: 383 RNQKRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
++ C+NC +GH+A++C C+ C GH + C
Sbjct: 388 TIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKEC 425
>gi|238634125|gb|ACR52024.1| gag protein [Human immunodeficiency virus 1]
gi|238634134|gb|ACR52032.1| gag protein [Human immunodeficiency virus 1]
gi|238634143|gb|ACR52040.1| gag protein [Human immunodeficiency virus 1]
gi|238634152|gb|ACR52048.1| gag protein [Human immunodeficiency virus 1]
gi|238634160|gb|ACR52055.1| gag protein [Human immunodeficiency virus 1]
gi|238634169|gb|ACR52063.1| gag protein [Human immunodeficiency virus 1]
gi|238634178|gb|ACR52071.1| gag protein [Human immunodeficiency virus 1]
gi|238634187|gb|ACR52079.1| gag protein [Human immunodeficiency virus 1]
gi|238634239|gb|ACR52114.1| gag protein [Human immunodeficiency virus 1]
gi|238634245|gb|ACR52118.1| gag protein [Human immunodeficiency virus 1]
gi|238634440|gb|ACR52281.1| gag protein [Human immunodeficiency virus 1]
gi|238634443|gb|ACR52283.1| gag protein [Human immunodeficiency virus 1]
gi|238634509|gb|ACR52340.1| gag protein [Human immunodeficiency virus 1]
gi|238634515|gb|ACR52344.1| gag protein [Human immunodeficiency virus 1]
gi|238634518|gb|ACR52346.1| gag protein [Human immunodeficiency virus 1]
gi|238635485|gb|ACR52734.1| gag protein [Human immunodeficiency virus 1]
gi|238635520|gb|ACR52764.1| gag protein [Human immunodeficiency virus 1]
gi|238635531|gb|ACR52773.1| gag protein [Human immunodeficiency virus 1]
gi|238635534|gb|ACR52775.1| gag protein [Human immunodeficiency virus 1]
gi|238635540|gb|ACR52780.1| gag protein [Human immunodeficiency virus 1]
gi|238635546|gb|ACR52785.1| gag protein [Human immunodeficiency virus 1]
gi|238635558|gb|ACR52795.1| gag protein [Human immunodeficiency virus 1]
gi|238635564|gb|ACR52800.1| gag protein [Human immunodeficiency virus 1]
gi|357395161|gb|AET76070.1| gag protein [Human immunodeficiency virus 1]
gi|357395420|gb|AET76297.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K +I C+NC GH ARNC K C+ C + GH KEC + A
Sbjct: 386 KRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
R K I C+ C GH AR C A C+ C +GH K+CT + +
Sbjct: 383 RNQKRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
++ C+NC +GH+A++C C+ C GH + C
Sbjct: 388 TIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKEC 425
>gi|238632976|gb|ACR51081.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K +I C+NC GH ARNC K C+ C + GH KEC + A
Sbjct: 386 KRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 42.7 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
R K I C+ C GH AR C A C+ C +GH K+CT + +
Sbjct: 383 RNQKRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
++ C+NC +GH+A++C C+ C GH + C
Sbjct: 388 TIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKEC 425
>gi|25166649|gb|AAN73456.1|AF484479_1 gag-pol fusion polyprotein [Human immunodeficiency virus 1]
Length = 1429
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ I C+NC GH ARNC + + C+ C + GH K+CP + A
Sbjct: 383 QKRIKCFNCGKEGHLARNCRSPRKQGCWKCGKEGHQMKDCPERQA 427
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK--RCYACHQAGHMAKEC 114
+ C+NC +GH+A++C C+ C GH ++CP + R Q G K
Sbjct: 386 IKCFNCGKEGHLARNCRSPRKQGCWKCGKEGHQMKDCPERQANFFRENLAFQQGEARKFS 445
Query: 115 PGQTAGKSP 123
Q SP
Sbjct: 446 SEQNGANSP 454
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
I C+ C GH AR C + C+ C +GH KDC
Sbjct: 386 IKCFNCGKEGHLARNCRSPRKQGCWKCGKEGHQMKDC 422
>gi|300720399|gb|ADK33238.1| gag protein [Human immunodeficiency virus 1]
Length = 493
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K SI C+NC GH ARNC K C+ C + GH K+C + A
Sbjct: 384 KRSIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 428
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
+G K I C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 381 KGQKRSIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 428
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 9/73 (12%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAK 112
S+ C+NC +GH+A++C C+ C GH ++C + + + H+
Sbjct: 386 SIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGR---- 441
Query: 113 ECPGQTAGKSPEP 125
PG PEP
Sbjct: 442 --PGNFLQSRPEP 452
>gi|296084007|emb|CBI24395.3| unnamed protein product [Vitis vinifera]
Length = 441
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 66/175 (37%), Gaps = 48/175 (27%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHV 68
CYNC + GH +C A + K C+ C + H A++C + C+ C GH
Sbjct: 126 CYNCGEEGHNAVNC-----ASVKRKKP---CFVCGSLEHNAKQC-MKGQDCFICKKGGHR 176
Query: 69 AKDCTVK------SSIICYNCNSSGHFARNCPNDSSKR---------------------- 100
AKDC K +S IC C S H +C ND S
Sbjct: 177 AKDCPEKHRSGSQNSKICLKCGDSRHDMFSCRNDYSPEDLKEIQCYICKSFGHLCCINYV 236
Query: 101 --------CYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
CY C Q GH C A + V +CY CG QGH + +CK
Sbjct: 237 DTGPIEPSCYKCGQLGHTGLACARLNAETAD---VQTPSSCYRCGEQGHFARECK 288
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 21/128 (16%)
Query: 9 CYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATE-------SVTCYN 61
C+ C GH CP+K + ++ K+ C KC + H C + + CY
Sbjct: 167 CFICKKGGHRAKDCPEKHRSGSQNSKI---CLKCGDSRHDMFSCRNDYSPEDLKEIQCYI 223
Query: 62 CSGQGHVAKDCTVKSSII---CYNCNSSGHFARNCPN--------DSSKRCYACHQAGHM 110
C GH+ V + I CY C GH C + CY C + GH
Sbjct: 224 CKSFGHLCCINYVDTGPIEPSCYKCGQLGHTGLACARLNAETADVQTPSSCYRCGEQGHF 283
Query: 111 AKECPGQT 118
A+EC T
Sbjct: 284 ARECKSST 291
>gi|255739433|gb|ACU31654.1| gag protein [Human immunodeficiency virus 1]
Length = 491
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 34/81 (41%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSS 98
C GH AR A N + + K ++ C+NC GH ARNC
Sbjct: 347 CQGVGGPGHKARVLAEAMSQTTNMNIMMQRSNFKGTKRTVKCFNCGKEGHIARNCRAPRK 406
Query: 99 KRCYACHQAGHMAKECPGQTA 119
K C+ C Q GH K+C + A
Sbjct: 407 KGCWKCGQEGHQMKDCTERQA 427
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K + C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 377 SNFKGTKRTVKCFNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTERQA 427
>gi|255739287|gb|ACU31581.1| gag protein [Human immunodeficiency virus 1]
Length = 493
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K SI C+NC GH ARNC K C+ C + GH K+C + A
Sbjct: 383 KRSIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 427
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
+G K I C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 380 KGPKRSIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 427
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 9/73 (12%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAK 112
S+ C+NC +GH+A++C C+ C GH ++C + + + H+
Sbjct: 385 SIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGR---- 440
Query: 113 ECPGQTAGKSPEP 125
PG PEP
Sbjct: 441 --PGNFLQSRPEP 451
>gi|213138199|gb|ACJ44769.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K SI C+NC GH ARNC K C+ C + GH K+C + A
Sbjct: 382 KRSIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 426
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K I C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 376 SNFKGPKRSIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 426
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
S+ C+NC +GH+A++C C+ C GH ++C
Sbjct: 384 SIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDC 421
>gi|37496491|emb|CAD48448.1| gag-pol fusion polyprotein precursor [Human immunodeficiency virus
1]
Length = 1499
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K SI C+NC GH ARNC K C+ C + GH K+C + A
Sbjct: 386 KRSIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 430
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 24 QKSSADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS----- 77
QKS + +G K I C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 378 QKS--NFKGPKRSIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGK 435
Query: 78 IICYNCNSSGHFARNCPNDSS 98
I N G+F ++ P ++
Sbjct: 436 IWPSNKGRPGNFPQSRPEPTA 456
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
S+ C+NC +GH+A++C C+ C GH ++C + ++ + K P
Sbjct: 388 SIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDC---TERQANFLGKIWPSNKGRP 444
Query: 116 GQTAGKSPEP 125
G PEP
Sbjct: 445 GNFPQSRPEP 454
>gi|3779268|gb|AAD03316.1| gag-pol fusion polyprotein [Human immunodeficiency virus 1]
Length = 1435
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K SI C+NC GH ARNC K C+ C + GH K+C + A
Sbjct: 385 KRSIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 429
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 24 QKSSADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
QKS + +G K I C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 377 QKS--NFKGPKRSIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQA 429
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
S+ C+NC +GH+A++C C+ C GH ++C
Sbjct: 387 SIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDC 424
>gi|75625101|sp|O12157.3|GAG_HV192 RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains:
RecName: Full=Matrix protein p17; Short=MA; Contains:
RecName: Full=Capsid protein p24; Short=CA; Contains:
RecName: Full=Spacer peptide p2; Contains: RecName:
Full=Nucleocapsid protein p7; Short=NC; Contains:
RecName: Full=Spacer peptide p1; Contains: RecName:
Full=p6-gag
gi|2194184|gb|AAB61122.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 39 CYKCNNYGHFARECATESVTCYNCSGQGHVAKDCT-VKSSIICYNCNSSGHFARNCPNDS 97
C GH AR A E+++ N + +C K +I C+NC GH ARNC
Sbjct: 348 CQGVGGPGHKARVLA-EAMSKVNNTNIMMQRSNCKGPKRTIKCFNCGKEGHLARNCRAPR 406
Query: 98 SKRCYACHQAGHMAKECPGQTA 119
K C+ C + GH K+C + A
Sbjct: 407 KKGCWKCGKEGHQVKDCTERQA 428
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 ADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
++ +G K I C+ C GH AR C A C+ C +GH KDCT + +
Sbjct: 378 SNCKGPKRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQVKDCTERQA 428
>gi|387119181|gb|AFJ52170.1| gag protein [Simian immunodeficiency virus]
Length = 509
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 22/41 (53%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
K + C+NC GH ARNC K C+ C Q GH K CP
Sbjct: 385 KRIVKCFNCGKEGHIARNCRAPRRKGCWKCGQEGHQQKNCP 425
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
V C+NC +GH+A++C C+ C GH +NCP+
Sbjct: 388 VKCFNCGKEGHIARNCRAPRRKGCWKCGQEGHQQKNCPD 426
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
+ C+ C GH AR C A C+ C +GH K+C
Sbjct: 388 VKCFNCGKEGHIARNCRAPRRKGCWKCGQEGHQQKNC 424
>gi|238632973|gb|ACR51079.1| gag protein [Human immunodeficiency virus 1]
gi|238632985|gb|ACR51087.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K +I C+NC GH ARNC K C+ C + GH KEC + A
Sbjct: 386 KRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 42.7 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 31 RGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVKSS 77
R K I C+ C GH AR C A C+ C +GH K+CT + +
Sbjct: 383 RNQKRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 430
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 56 SVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
++ C+NC +GH+A++C C+ C GH + C
Sbjct: 388 TIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKEC 425
>gi|156144945|gb|ABU53016.1| gag protein [Simian immunodeficiency virus]
Length = 509
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 22/41 (53%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECP 115
K + C+NC GH ARNC K C+ C Q GH K CP
Sbjct: 385 KRIVKCFNCGKEGHIARNCRAPRRKGCWKCGQEGHQQKNCP 425
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPN 95
V C+NC +GH+A++C C+ C GH +NCP+
Sbjct: 388 VKCFNCGKEGHIARNCRAPRRKGCWKCGQEGHQQKNCPD 426
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 37 IVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDC 72
+ C+ C GH AR C A C+ C +GH K+C
Sbjct: 388 VKCFNCGKEGHIARNCRAPRRKGCWKCGQEGHQQKNC 424
>gi|297805180|ref|XP_002870474.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316310|gb|EFH46733.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 176
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 63/144 (43%), Gaps = 18/144 (12%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQG 66
I+CY C GH P S + + CY+C GH T +C+ C G+G
Sbjct: 37 IKCYVCKSLGHLCCIEPSHSPSWT------VSCYRCGQLGH------TGLASCFICEGEG 84
Query: 67 HVAKDCTVKSSIICYNCNSS--GHFARNCPNDSSKRCY--ACHQAGHMAKECPGQTAGKS 122
H C SS +C+ NSS G F PN SS C+ + G+++ ECP + S
Sbjct: 85 HFEHQCP-NSSSVCFPENSSEEGCFEHQGPNSSSV-CFQEIRREEGYLSSECPNSSGISS 142
Query: 123 PEPVVDMSLTCYVCGHQGHLSYDC 146
CY C +GH++ DC
Sbjct: 143 TLQGRKTRRLCYECKGKGHIARDC 166
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 19/112 (16%)
Query: 1 MSSTSTIQCYNCFDFGHYQYSCPQKSSA------------DARGDKVGIVCYKCNNYGHF 48
+ T C+ C GH+++ CP SS + +G VC++
Sbjct: 69 LGHTGLASCFICEGEGHFEHQCPNSSSVCFPENSSEEGCFEHQGPNSSSVCFQ-----EI 123
Query: 49 ARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSKR 100
RE S C N SG + K+ +CY C GH AR+CPN S +
Sbjct: 124 RREEGYLSSECPNSSGISSTLQG--RKTRRLCYECKGKGHIARDCPNSSQDK 173
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 38/102 (37%), Gaps = 17/102 (16%)
Query: 33 DKVGIVCYKCNNYGHFARECATE-------SVTCYNCSGQGH---VAKDCTVKSSIICYN 82
D+ VC +C +GH C E + CY C GH + + ++ CY
Sbjct: 6 DEAAEVCLRCGEFGHDMTLCKYEYSQEDLKDIKCYVCKSLGHLCCIEPSHSPSWTVSCYR 65
Query: 83 CNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPE 124
C GH C+ C GH +CP ++ PE
Sbjct: 66 CGQLGHTGL-------ASCFICEGEGHFEHQCPNSSSVCFPE 100
>gi|119361927|gb|ABL66914.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
K +I C+NC GH ARNC K C+ C + GH KEC + A
Sbjct: 388 KRNIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKECTERQA 432
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 41/101 (40%), Gaps = 9/101 (8%)
Query: 25 KSSADARGDKVGIVCYKCNNYGHFARECATESVTCYNCSGQGHVAKDCTVKSSIICYNCN 84
++ + A V I+ K N G ++ C+NC +GH+A++C C+ C
Sbjct: 365 EAMSQASNAAVAIMMQKSNFKG------PKRNIKCFNCGKEGHLARNCRAPRKKGCWKCG 418
Query: 85 SSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTAGKSPEP 125
GH + C + ++ + K PG PEP
Sbjct: 419 KEGHQMKEC---TERQANFLGKIWPSNKGRPGNFLQNRPEP 456
>gi|114842155|dbj|BAF32563.1| gag polyprotein [Simian immunodeficiency virus]
Length = 519
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQ 117
CYNC GH R CP +C C + GH+AK+C GQ
Sbjct: 399 CYNCGKFGHMQRQCPEPRKTKCLKCGKLGHLAKDCRGQ 436
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 9/46 (19%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC 52
++CYNC FGH Q CP+ C KC GH A++C
Sbjct: 397 LRCYNCGKFGHMQRQCPEPRKTK---------CLKCGKLGHLAKDC 433
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 100 RCYACHQAGHMAKECPGQTAGKSPEPVVDMSLTCYVCGHQGHLSYDCK 147
RCY C + GHM ++C PEP C CG GHL+ DC+
Sbjct: 398 RCYNCGKFGHMQRQC--------PEP---RKTKCLKCGKLGHLAKDCR 434
>gi|334431|gb|AAA51642.1| gag polyprotein [Simian immunodeficiency virus]
Length = 513
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNC 93
V CY C GHV K+CT K ++C C GHFAR+C
Sbjct: 393 VKCYKCGKFGHVQKNCTQKGPVVCLKCGKPGHFARDC 429
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 9/46 (19%)
Query: 7 IQCYNCFDFGHYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC 52
++CY C FGH Q +C QK +VC KC GHFAR+C
Sbjct: 393 VKCYKCGKFGHVQKNCTQKGP---------VVCLKCGKPGHFARDC 429
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 80 CYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPG 116
CY C GH +NC C C + GH A++C G
Sbjct: 395 CYKCGKFGHVQKNCTQKGPVVCLKCGKPGHFARDCRG 431
>gi|374350292|gb|AEZ35820.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 491
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 24/45 (53%)
Query: 75 KSSIICYNCNSSGHFARNCPNDSSKRCYACHQAGHMAKECPGQTA 119
+ I C+NC GH ARNC K C+ C Q GH KEC + A
Sbjct: 381 QKRIKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKECTERQA 425
Score = 42.7 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 17 HYQYSCPQKSSADARGDKVGIVCYKCNNYGHFAREC-ATESVTCYNCSGQGHVAKDCTVK 75
H Q++ + +G K I C+ C GH AR C A C+ C +GH K+CT +
Sbjct: 365 HVQHANIMMQKGNFKGQK-RIKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKECTER 423
Query: 76 SS 77
+
Sbjct: 424 QA 425
Score = 42.0 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 9/72 (12%)
Query: 57 VTCYNCSGQGHVAKDCTVKSSIICYNCNSSGHFARNCPNDSSK---RCYACHQAGHMAKE 113
+ C+NC +GH+A++C C+ C GH + C + + + H+
Sbjct: 384 IKCFNCGKEGHLARNCRAPRKKGCWKCGQEGHQMKECTERQANFLGKFWPSHKGR----- 438
Query: 114 CPGQTAGKSPEP 125
PG PEP
Sbjct: 439 -PGNFPQNRPEP 449
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.132 0.448
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,363,464,869
Number of Sequences: 23463169
Number of extensions: 86982558
Number of successful extensions: 491095
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 18706
Number of HSP's successfully gapped in prelim test: 4027
Number of HSP's that attempted gapping in prelim test: 274824
Number of HSP's gapped (non-prelim): 133927
length of query: 152
length of database: 8,064,228,071
effective HSP length: 115
effective length of query: 37
effective length of database: 9,660,930,932
effective search space: 357454444484
effective search space used: 357454444484
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)