Query psy16575
Match_columns 247
No_of_seqs 337 out of 2306
Neff 8.4
Searched_HMMs 46136
Date Fri Aug 16 16:30:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16575.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16575hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF00151 Lipase: Lipase; Inte 100.0 2.1E-65 4.7E-70 450.3 13.0 239 4-245 50-307 (331)
2 TIGR03230 lipo_lipase lipoprot 100.0 2.1E-62 4.5E-67 442.2 22.3 241 5-247 21-287 (442)
3 cd00707 Pancreat_lipase_like P 100.0 8.6E-61 1.9E-65 413.1 23.3 241 4-247 15-262 (275)
4 PRK00870 haloalkane dehalogena 99.6 2E-15 4.3E-20 131.6 12.3 107 23-137 44-151 (302)
5 PLN02824 hydrolase, alpha/beta 99.6 1.1E-14 2.3E-19 126.4 12.4 123 5-137 10-138 (294)
6 PLN02298 hydrolase, alpha/beta 99.6 1.2E-14 2.7E-19 128.2 12.6 128 7-136 36-169 (330)
7 PLN02211 methyl indole-3-aceta 99.6 1.8E-14 3.9E-19 124.3 12.1 114 16-136 9-122 (273)
8 PLN02965 Probable pheophorbida 99.6 1.5E-14 3.1E-19 123.2 10.8 103 27-136 5-107 (255)
9 TIGR02240 PHA_depoly_arom poly 99.6 1.7E-14 3.6E-19 124.1 10.4 104 23-136 23-126 (276)
10 PLN02385 hydrolase; alpha/beta 99.6 2.6E-14 5.5E-19 127.4 11.8 111 24-136 86-197 (349)
11 PHA02857 monoglyceride lipase; 99.5 6E-14 1.3E-18 120.4 12.4 107 25-135 25-131 (276)
12 PRK11126 2-succinyl-6-hydroxy- 99.5 4.8E-14 1E-18 118.3 11.0 99 25-135 2-101 (242)
13 TIGR03611 RutD pyrimidine util 99.5 5.1E-14 1.1E-18 117.8 10.8 105 23-136 11-115 (257)
14 PRK10673 acyl-CoA esterase; Pr 99.5 5.9E-14 1.3E-18 118.6 10.8 102 23-135 14-115 (255)
15 PRK10349 carboxylesterase BioH 99.5 6.4E-14 1.4E-18 119.0 11.0 101 20-135 8-108 (256)
16 TIGR01250 pro_imino_pep_2 prol 99.5 1.1E-13 2.5E-18 117.3 12.4 105 25-136 25-131 (288)
17 PF12697 Abhydrolase_6: Alpha/ 99.5 8.1E-14 1.8E-18 113.5 11.0 101 28-137 1-102 (228)
18 PRK03592 haloalkane dehalogena 99.5 9.5E-14 2.1E-18 120.5 11.3 102 24-135 26-127 (295)
19 PRK10749 lysophospholipase L2; 99.5 1.7E-13 3.7E-18 121.3 12.8 119 14-136 41-166 (330)
20 TIGR03343 biphenyl_bphD 2-hydr 99.5 1.3E-13 2.9E-18 118.2 11.5 125 4-136 6-136 (282)
21 PLN02679 hydrolase, alpha/beta 99.5 1.3E-13 2.9E-18 123.5 11.4 103 25-136 88-191 (360)
22 TIGR03101 hydr2_PEP hydrolase, 99.5 2.9E-13 6.2E-18 116.3 12.3 109 25-137 25-135 (266)
23 PRK03204 haloalkane dehalogena 99.5 2.7E-13 5.7E-18 117.7 12.1 103 24-135 33-135 (286)
24 TIGR03056 bchO_mg_che_rel puta 99.5 2.4E-13 5.3E-18 115.7 11.3 104 24-136 27-130 (278)
25 TIGR03695 menH_SHCHC 2-succiny 99.5 3.7E-13 8.1E-18 111.2 10.8 103 25-135 1-104 (251)
26 PLN02578 hydrolase 99.5 4.6E-13 9.9E-18 119.7 11.3 104 24-137 85-188 (354)
27 TIGR02427 protocat_pcaD 3-oxoa 99.5 2.6E-13 5.6E-18 112.5 9.0 103 24-136 12-114 (251)
28 KOG4409|consensus 99.4 3.7E-13 7.9E-18 116.9 9.2 122 6-137 68-196 (365)
29 PLN02511 hydrolase 99.4 6.9E-13 1.5E-17 120.0 11.4 109 23-134 98-208 (388)
30 PLN02894 hydrolase, alpha/beta 99.4 9.5E-13 2.1E-17 119.7 12.0 109 23-137 103-212 (402)
31 PLN03087 BODYGUARD 1 domain co 99.4 8.1E-13 1.8E-17 122.0 11.3 105 25-135 201-308 (481)
32 PLN03084 alpha/beta hydrolase 99.4 1.3E-12 2.8E-17 117.9 12.0 105 24-137 126-233 (383)
33 TIGR01738 bioH putative pimelo 99.4 7.2E-13 1.6E-17 109.6 8.7 97 25-136 4-100 (245)
34 PRK10985 putative hydrolase; P 99.4 1.9E-12 4E-17 114.4 11.8 110 23-135 56-167 (324)
35 COG2267 PldB Lysophospholipase 99.4 1.7E-12 3.7E-17 113.5 11.3 124 11-138 17-144 (298)
36 PRK14875 acetoin dehydrogenase 99.4 2.3E-12 5.1E-17 114.9 11.7 104 23-136 129-232 (371)
37 COG1647 Esterase/lipase [Gener 99.4 3.7E-12 8E-17 104.2 11.2 110 20-137 10-119 (243)
38 PLN02652 hydrolase; alpha/beta 99.4 3.5E-12 7.6E-17 115.6 11.5 109 24-136 135-245 (395)
39 PRK06489 hypothetical protein; 99.4 2.1E-12 4.7E-17 115.6 9.7 105 25-135 69-188 (360)
40 KOG4178|consensus 99.4 5.9E-12 1.3E-16 108.9 11.1 109 21-137 40-149 (322)
41 KOG1455|consensus 99.4 9.3E-12 2E-16 106.4 12.0 113 25-139 54-167 (313)
42 TIGR01249 pro_imino_pep_1 prol 99.3 7.5E-12 1.6E-16 109.5 10.7 122 6-136 7-130 (306)
43 PRK08775 homoserine O-acetyltr 99.3 2.9E-12 6.3E-17 114.0 7.9 104 25-136 57-173 (343)
44 PLN00021 chlorophyllase 99.3 1.7E-11 3.7E-16 107.8 11.7 108 22-136 49-166 (313)
45 PF12695 Abhydrolase_5: Alpha/ 99.3 1.2E-11 2.6E-16 95.4 9.3 93 27-134 1-93 (145)
46 PRK10566 esterase; Provisional 99.3 2.5E-11 5.4E-16 102.6 11.6 99 23-124 25-130 (249)
47 PRK13604 luxD acyl transferase 99.3 2.3E-11 4.9E-16 105.9 10.7 107 23-138 35-143 (307)
48 PRK11071 esterase YqiA; Provis 99.3 3.7E-11 8E-16 98.4 10.2 91 26-137 2-94 (190)
49 KOG2564|consensus 99.3 4.2E-11 9E-16 101.2 10.4 108 22-134 71-180 (343)
50 TIGR01392 homoserO_Ac_trn homo 99.3 1.3E-11 2.8E-16 110.1 7.4 108 24-136 30-162 (351)
51 COG0429 Predicted hydrolase of 99.2 4.4E-11 9.5E-16 103.5 10.1 114 2-122 56-170 (345)
52 TIGR03100 hydr1_PEP hydrolase, 99.2 1.5E-10 3.3E-15 99.9 13.3 107 24-135 25-133 (274)
53 PRK05077 frsA fermentation/res 99.2 9.9E-11 2.1E-15 106.8 11.0 108 23-136 192-300 (414)
54 KOG1454|consensus 99.2 4.5E-11 9.8E-16 105.7 8.5 104 23-133 56-160 (326)
55 TIGR01607 PST-A Plasmodium sub 99.2 1.1E-10 2.4E-15 103.6 11.0 111 24-135 20-184 (332)
56 PF05990 DUF900: Alpha/beta hy 99.2 1.7E-10 3.8E-15 97.4 10.8 113 23-138 16-139 (233)
57 PRK07581 hypothetical protein; 99.2 6.1E-11 1.3E-15 105.1 7.7 107 26-136 42-159 (339)
58 PLN02980 2-oxoglutarate decarb 99.2 1.7E-10 3.6E-15 120.6 11.3 103 24-135 1370-1479(1655)
59 PRK00175 metX homoserine O-ace 99.2 9.6E-11 2.1E-15 105.7 8.3 107 25-137 48-183 (379)
60 TIGR01836 PHA_synth_III_C poly 99.1 3.5E-10 7.6E-15 100.9 11.1 105 25-136 62-171 (350)
61 cd00741 Lipase Lipase. Lipase 99.1 3.7E-10 8.1E-15 89.0 9.9 106 82-190 10-125 (153)
62 PF01674 Lipase_2: Lipase (cla 99.1 1.9E-10 4.2E-15 95.8 8.5 92 25-122 1-96 (219)
63 PLN02872 triacylglycerol lipas 99.1 1.4E-10 3.1E-15 105.0 7.8 132 2-138 51-199 (395)
64 TIGR01840 esterase_phb esteras 99.1 3.9E-10 8.4E-15 93.6 9.5 112 22-135 10-129 (212)
65 PRK05855 short chain dehydroge 99.1 5E-10 1.1E-14 105.6 10.8 91 23-121 23-114 (582)
66 TIGR02821 fghA_ester_D S-formy 99.1 1.2E-09 2.7E-14 94.2 11.6 111 24-135 41-172 (275)
67 PF07819 PGAP1: PGAP1-like pro 99.1 1.7E-09 3.8E-14 90.8 11.4 108 24-133 3-120 (225)
68 PF07859 Abhydrolase_3: alpha/ 99.0 7.4E-10 1.6E-14 91.3 8.0 103 28-135 1-109 (211)
69 PRK10162 acetyl esterase; Prov 99.0 2.7E-09 5.9E-14 94.1 11.9 108 24-137 80-196 (318)
70 PRK11460 putative hydrolase; P 99.0 4E-09 8.7E-14 88.9 12.4 111 22-135 13-137 (232)
71 KOG2382|consensus 99.0 1E-09 2.3E-14 95.0 8.7 107 24-135 51-158 (315)
72 PF02230 Abhydrolase_2: Phosph 99.0 8.6E-09 1.9E-13 85.8 12.6 139 22-165 11-166 (216)
73 PLN02442 S-formylglutathione h 99.0 3.1E-09 6.7E-14 92.3 10.0 110 23-135 45-177 (283)
74 PF00561 Abhydrolase_1: alpha/ 99.0 2.7E-09 5.8E-14 87.8 8.5 75 56-135 1-78 (230)
75 PF12740 Chlorophyllase2: Chlo 99.0 5.2E-09 1.1E-13 88.9 10.1 108 22-136 14-131 (259)
76 TIGR00976 /NonD putative hydro 99.0 2.8E-09 6.2E-14 100.7 9.4 114 23-139 20-135 (550)
77 COG0596 MhpC Predicted hydrola 98.9 9.7E-09 2.1E-13 84.1 10.7 103 25-137 21-124 (282)
78 TIGR03502 lipase_Pla1_cef extr 98.8 1.6E-08 3.6E-13 97.7 10.5 94 25-121 449-575 (792)
79 TIGR01838 PHA_synth_I poly(R)- 98.8 2.4E-08 5.1E-13 93.5 11.3 106 24-135 187-301 (532)
80 PF06342 DUF1057: Alpha/beta h 98.8 3.7E-08 8.1E-13 83.9 11.0 103 25-136 35-137 (297)
81 COG0657 Aes Esterase/lipase [L 98.8 4.2E-08 9E-13 86.1 11.8 108 23-135 77-190 (312)
82 COG4782 Uncharacterized protei 98.8 3.7E-08 8E-13 86.4 9.9 112 21-135 112-233 (377)
83 PF00975 Thioesterase: Thioest 98.8 8.3E-08 1.8E-12 79.9 11.6 104 26-139 1-107 (229)
84 PRK07868 acyl-CoA synthetase; 98.8 2.9E-08 6.3E-13 99.9 10.0 104 24-134 66-175 (994)
85 KOG4627|consensus 98.7 4.3E-08 9.4E-13 79.7 8.3 103 22-132 64-168 (270)
86 PF01738 DLH: Dienelactone hyd 98.7 9.3E-08 2E-12 79.5 10.1 107 24-134 13-130 (218)
87 PF07224 Chlorophyllase: Chlor 98.7 7.3E-08 1.6E-12 81.1 9.3 108 22-136 43-157 (307)
88 KOG1838|consensus 98.7 1.1E-07 2.4E-12 85.1 10.7 96 23-121 123-219 (409)
89 KOG4391|consensus 98.7 2.8E-08 6.2E-13 81.4 5.8 104 22-131 75-179 (300)
90 PF06821 Ser_hydrolase: Serine 98.7 1.4E-07 2.9E-12 76.0 9.4 90 28-137 1-92 (171)
91 COG0400 Predicted esterase [Ge 98.7 1.9E-07 4.2E-12 77.2 9.8 114 21-138 14-136 (207)
92 KOG1552|consensus 98.6 1.4E-07 3.1E-12 79.3 8.4 102 25-135 60-162 (258)
93 PF10230 DUF2305: Uncharacteri 98.6 4E-07 8.6E-12 78.4 10.7 112 25-138 2-124 (266)
94 PF05728 UPF0227: Uncharacteri 98.6 4.5E-07 9.7E-12 74.0 9.4 92 27-139 1-94 (187)
95 PF00326 Peptidase_S9: Prolyl 98.6 2.8E-07 6E-12 76.2 8.3 87 50-136 9-99 (213)
96 COG0412 Dienelactone hydrolase 98.6 1.4E-06 3.1E-11 73.7 12.7 109 25-137 27-147 (236)
97 PF05057 DUF676: Putative seri 98.6 1.8E-07 3.9E-12 78.2 6.9 92 24-122 3-99 (217)
98 PRK06765 homoserine O-acetyltr 98.5 2.5E-07 5.4E-12 83.8 8.1 106 25-135 56-195 (389)
99 PF06028 DUF915: Alpha/beta hy 98.5 6.1E-07 1.3E-11 76.6 9.0 107 23-133 9-140 (255)
100 KOG1515|consensus 98.4 1.6E-06 3.5E-11 76.8 10.5 112 23-138 88-209 (336)
101 PF03403 PAF-AH_p_II: Platelet 98.4 8.9E-07 1.9E-11 80.0 8.5 110 23-136 98-262 (379)
102 PF12146 Hydrolase_4: Putative 98.4 4.8E-07 1E-11 63.4 4.9 63 25-90 16-78 (79)
103 COG2272 PnbA Carboxylesterase 98.4 2E-06 4.3E-11 78.5 9.6 128 3-137 77-218 (491)
104 PF06057 VirJ: Bacterial virul 98.4 3.5E-06 7.5E-11 68.3 9.9 101 26-137 3-108 (192)
105 KOG4667|consensus 98.3 2.7E-06 5.8E-11 69.9 8.5 105 23-132 31-135 (269)
106 COG1506 DAP2 Dipeptidyl aminop 98.3 4.7E-06 1E-10 80.0 11.1 111 20-132 387-503 (620)
107 PF10503 Esterase_phd: Esteras 98.3 2.3E-06 5.1E-11 71.5 7.1 107 24-132 15-128 (220)
108 PRK04940 hypothetical protein; 98.3 6E-06 1.3E-10 66.6 8.9 89 28-136 2-92 (180)
109 PF02129 Peptidase_S15: X-Pro 98.2 7.3E-06 1.6E-10 70.6 9.7 114 22-139 17-139 (272)
110 TIGR01839 PHA_synth_II poly(R) 98.2 1.1E-05 2.4E-10 75.5 10.9 104 24-134 214-326 (560)
111 COG3319 Thioesterase domains o 98.2 7.3E-06 1.6E-10 70.0 8.9 101 26-137 1-104 (257)
112 COG1075 LipA Predicted acetylt 98.2 4.5E-06 9.8E-11 74.3 7.8 102 25-138 59-166 (336)
113 PF06500 DUF1100: Alpha/beta h 98.2 2.1E-06 4.5E-11 77.5 5.3 105 25-135 190-295 (411)
114 COG2945 Predicted hydrolase of 98.2 1.2E-05 2.5E-10 65.0 9.0 110 22-136 25-138 (210)
115 cd00312 Esterase_lipase Estera 98.2 7.7E-06 1.7E-10 76.2 9.2 107 23-133 93-210 (493)
116 PRK10252 entF enterobactin syn 98.1 1.9E-05 4.2E-10 81.5 10.8 102 25-137 1068-1172(1296)
117 KOG2624|consensus 98.1 7.8E-06 1.7E-10 74.0 6.6 126 2-136 55-199 (403)
118 PF05677 DUF818: Chlamydia CHL 98.1 2.3E-05 5E-10 68.7 9.0 94 24-122 136-236 (365)
119 KOG2984|consensus 98.1 1.2E-05 2.5E-10 65.6 6.4 110 22-135 39-148 (277)
120 PRK10439 enterobactin/ferric e 98.0 4.7E-05 1E-09 69.6 11.2 111 23-136 207-323 (411)
121 COG3571 Predicted hydrolase of 98.0 0.00013 2.8E-09 57.5 10.9 104 23-133 12-121 (213)
122 PRK10115 protease 2; Provision 98.0 6.3E-05 1.4E-09 73.1 11.2 112 23-135 443-558 (686)
123 PF09752 DUF2048: Uncharacteri 98.0 7E-05 1.5E-09 66.1 10.1 111 23-137 90-211 (348)
124 COG3509 LpqC Poly(3-hydroxybut 97.9 7.8E-05 1.7E-09 64.1 9.4 108 22-132 58-175 (312)
125 COG4814 Uncharacterized protei 97.9 8.4E-05 1.8E-09 62.6 9.3 103 27-133 47-173 (288)
126 COG4757 Predicted alpha/beta h 97.9 5.6E-05 1.2E-09 62.9 7.9 111 8-122 10-126 (281)
127 PLN02733 phosphatidylcholine-s 97.9 5.1E-05 1.1E-09 69.8 8.4 86 42-134 109-199 (440)
128 PF12048 DUF3530: Protein of u 97.8 0.00042 9.2E-09 61.0 13.1 114 23-139 85-232 (310)
129 KOG2112|consensus 97.8 0.00014 3E-09 59.6 9.2 110 25-137 3-129 (206)
130 PF00756 Esterase: Putative es 97.8 2.2E-05 4.8E-10 66.3 4.7 48 88-135 101-149 (251)
131 PF05448 AXE1: Acetyl xylan es 97.8 0.00015 3.3E-09 64.0 9.2 110 22-136 80-209 (320)
132 COG3545 Predicted esterase of 97.7 0.0001 2.2E-09 58.8 6.8 93 26-137 3-95 (181)
133 KOG3101|consensus 97.7 5.8E-05 1.3E-09 62.0 5.2 111 25-135 44-175 (283)
134 PF08538 DUF1749: Protein of u 97.7 0.00036 7.9E-09 60.7 10.5 107 24-136 32-148 (303)
135 COG2021 MET2 Homoserine acetyl 97.7 7.5E-05 1.6E-09 66.1 6.3 108 25-135 51-181 (368)
136 PLN02606 palmitoyl-protein thi 97.7 0.00029 6.2E-09 61.3 9.8 101 25-133 26-129 (306)
137 PF00135 COesterase: Carboxyle 97.7 0.00014 3E-09 68.0 7.8 108 24-134 124-243 (535)
138 PLN02633 palmitoyl protein thi 97.6 0.00048 1E-08 60.0 9.8 101 25-133 25-128 (314)
139 COG3243 PhaC Poly(3-hydroxyalk 97.6 0.00042 9.2E-09 62.4 9.7 123 4-133 83-214 (445)
140 COG4188 Predicted dienelactone 97.6 0.0002 4.3E-09 63.6 7.6 93 24-119 70-177 (365)
141 PF02089 Palm_thioest: Palmito 97.6 0.00027 5.8E-09 60.9 8.1 104 25-133 5-113 (279)
142 KOG3724|consensus 97.6 0.00057 1.2E-08 65.6 10.9 110 22-133 86-217 (973)
143 PF02450 LCAT: Lecithin:choles 97.6 0.00032 7E-09 63.7 8.6 81 43-135 67-159 (389)
144 PF10340 DUF2424: Protein of u 97.6 0.00063 1.4E-08 61.0 10.0 104 24-136 121-235 (374)
145 PF06259 Abhydrolase_8: Alpha/ 97.5 0.0014 3.1E-08 52.9 10.4 114 23-136 17-144 (177)
146 KOG3975|consensus 97.5 0.0013 2.9E-08 55.4 10.2 115 21-137 25-148 (301)
147 PF02273 Acyl_transf_2: Acyl t 97.4 0.0019 4.2E-08 54.4 10.4 101 22-130 27-128 (294)
148 COG3208 GrsT Predicted thioest 97.4 0.00051 1.1E-08 57.7 6.9 151 26-188 8-172 (244)
149 PF12715 Abhydrolase_7: Abhydr 97.4 0.00058 1.3E-08 61.1 7.6 106 23-130 113-254 (390)
150 TIGR01849 PHB_depoly_PhaZ poly 97.3 0.0014 3.1E-08 59.6 8.9 98 26-133 103-205 (406)
151 KOG3847|consensus 97.3 0.00092 2E-08 58.1 7.0 43 22-67 115-157 (399)
152 KOG2541|consensus 97.2 0.0043 9.4E-08 52.8 10.2 101 26-133 24-125 (296)
153 COG3150 Predicted esterase [Ge 97.2 0.0031 6.6E-08 50.1 8.7 94 28-140 2-95 (191)
154 KOG1516|consensus 97.1 0.0029 6.3E-08 59.8 9.5 96 25-120 112-214 (545)
155 KOG2565|consensus 97.0 0.0022 4.8E-08 57.0 7.3 96 26-129 153-257 (469)
156 COG4099 Predicted peptidase [G 97.0 0.0024 5.3E-08 55.2 7.1 101 26-133 192-301 (387)
157 COG3458 Acetyl esterase (deace 97.0 0.001 2.2E-08 56.7 4.4 108 23-135 81-209 (321)
158 smart00824 PKS_TE Thioesterase 96.9 0.0064 1.4E-07 48.8 9.0 87 43-138 15-104 (212)
159 PF03583 LIP: Secretory lipase 96.9 0.0049 1.1E-07 53.8 8.6 86 45-137 17-111 (290)
160 PF01764 Lipase_3: Lipase (cla 96.9 0.0024 5.2E-08 48.9 5.7 24 100-123 63-86 (140)
161 KOG4840|consensus 96.8 0.0054 1.2E-07 51.0 7.5 126 4-135 15-143 (299)
162 PRK05371 x-prolyl-dipeptidyl a 96.8 0.0056 1.2E-07 60.3 9.0 84 50-135 274-372 (767)
163 PF11187 DUF2974: Protein of u 96.8 0.0024 5.3E-08 53.6 5.6 35 101-135 84-122 (224)
164 COG2382 Fes Enterochelin ester 96.8 0.0027 5.8E-08 55.0 5.9 109 24-135 97-211 (299)
165 COG2819 Predicted hydrolase of 96.8 0.024 5.2E-07 48.4 11.1 40 96-135 132-171 (264)
166 PF08840 BAAT_C: BAAT / Acyl-C 96.7 0.0037 7.9E-08 52.0 5.9 56 85-141 5-61 (213)
167 KOG2100|consensus 96.7 0.0083 1.8E-07 59.0 9.0 112 25-136 526-644 (755)
168 KOG4372|consensus 96.7 0.0014 3.1E-08 58.7 3.3 108 8-122 60-171 (405)
169 PF11144 DUF2920: Protein of u 96.6 0.046 9.9E-07 49.5 12.2 29 102-130 185-213 (403)
170 COG3946 VirJ Type IV secretory 96.6 0.0091 2E-07 53.7 7.4 87 27-124 262-349 (456)
171 PTZ00472 serine carboxypeptida 96.5 0.0051 1.1E-07 57.1 5.9 98 23-122 75-192 (462)
172 KOG3043|consensus 96.5 0.02 4.3E-07 47.7 8.6 108 25-136 39-154 (242)
173 COG1770 PtrB Protease II [Amin 96.5 0.0045 9.8E-08 58.7 5.4 140 21-165 444-600 (682)
174 PF01083 Cutinase: Cutinase; 96.5 0.023 5.1E-07 45.9 8.8 91 27-121 7-101 (179)
175 KOG2281|consensus 96.4 0.011 2.4E-07 56.0 7.5 101 23-124 640-750 (867)
176 KOG1553|consensus 96.3 0.017 3.8E-07 51.0 7.8 99 25-134 243-342 (517)
177 cd00519 Lipase_3 Lipase (class 96.3 0.011 2.4E-07 49.4 6.5 25 99-123 126-150 (229)
178 KOG3967|consensus 96.3 0.025 5.5E-07 46.8 7.9 107 23-135 99-226 (297)
179 PF03959 FSH1: Serine hydrolas 96.2 0.011 2.4E-07 49.0 5.8 110 24-137 3-146 (212)
180 PF05277 DUF726: Protein of un 96.1 0.013 2.8E-07 52.2 6.0 119 79-205 201-330 (345)
181 COG2936 Predicted acyl esteras 96.1 0.018 3.9E-07 54.2 7.0 120 4-129 28-152 (563)
182 COG0627 Predicted esterase [Ge 96.0 0.023 5E-07 50.1 7.3 34 102-135 153-186 (316)
183 KOG4388|consensus 96.0 0.025 5.4E-07 53.2 7.3 92 24-120 395-488 (880)
184 PF05577 Peptidase_S28: Serine 95.9 0.041 8.8E-07 50.6 8.6 109 21-130 25-142 (434)
185 PF07082 DUF1350: Protein of u 95.7 0.16 3.4E-06 43.1 10.5 91 27-124 19-113 (250)
186 KOG2237|consensus 95.7 0.012 2.6E-07 55.7 4.0 107 22-130 467-578 (712)
187 PLN02517 phosphatidylcholine-s 95.5 0.052 1.1E-06 51.4 7.4 84 44-135 159-262 (642)
188 PLN02454 triacylglycerol lipas 95.2 0.034 7.5E-07 50.6 5.3 41 82-122 208-249 (414)
189 PLN02408 phospholipase A1 95.1 0.038 8.2E-07 49.6 5.0 23 101-123 200-222 (365)
190 PF08237 PE-PPE: PE-PPE domain 95.0 0.1 2.3E-06 43.8 7.3 83 55-137 2-91 (225)
191 PLN02310 triacylglycerol lipas 94.9 0.035 7.5E-07 50.4 4.4 22 101-122 209-230 (405)
192 PLN02571 triacylglycerol lipas 94.9 0.028 6E-07 51.2 3.7 21 102-122 227-247 (413)
193 KOG2369|consensus 94.9 0.054 1.2E-06 49.7 5.5 39 84-124 166-205 (473)
194 KOG2931|consensus 94.9 0.2 4.3E-06 43.5 8.6 105 23-135 44-156 (326)
195 PF11339 DUF3141: Protein of u 94.7 0.46 1E-05 44.4 11.1 100 21-131 64-170 (581)
196 KOG2385|consensus 94.5 0.038 8.2E-07 51.2 3.5 111 75-191 424-540 (633)
197 PLN02753 triacylglycerol lipas 94.4 0.052 1.1E-06 50.7 4.3 22 101-122 312-333 (531)
198 PLN03037 lipase class 3 family 94.2 0.06 1.3E-06 50.2 4.2 22 101-122 318-339 (525)
199 PLN00413 triacylglycerol lipas 94.1 0.065 1.4E-06 49.5 4.4 23 99-121 282-304 (479)
200 PLN02324 triacylglycerol lipas 94.1 0.08 1.7E-06 48.2 4.7 21 102-122 216-236 (415)
201 PF11288 DUF3089: Protein of u 94.0 0.31 6.8E-06 40.3 7.7 66 55-122 45-116 (207)
202 PLN02802 triacylglycerol lipas 93.9 0.091 2E-06 48.9 4.8 23 101-123 330-352 (509)
203 PF04301 DUF452: Protein of un 93.8 0.21 4.5E-06 41.6 6.3 76 25-133 11-87 (213)
204 KOG2183|consensus 93.7 0.46 9.9E-06 43.2 8.7 112 21-138 76-202 (492)
205 PLN02162 triacylglycerol lipas 93.6 0.09 1.9E-06 48.5 4.2 22 100-121 277-298 (475)
206 PLN02847 triacylglycerol lipas 93.6 0.13 2.7E-06 48.9 5.2 22 101-122 251-272 (633)
207 PF03096 Ndr: Ndr family; Int 93.4 0.21 4.6E-06 43.3 5.9 104 24-135 22-133 (283)
208 PLN02719 triacylglycerol lipas 93.2 0.1 2.2E-06 48.7 3.9 22 101-122 298-319 (518)
209 PLN02934 triacylglycerol lipas 92.7 0.14 3.1E-06 47.7 4.1 23 99-121 319-341 (515)
210 PLN02761 lipase class 3 family 92.5 0.19 4.1E-06 47.0 4.7 22 101-122 294-315 (527)
211 KOG2029|consensus 92.2 0.17 3.6E-06 47.8 3.9 61 55-115 478-540 (697)
212 KOG2551|consensus 92.0 0.4 8.6E-06 40.0 5.5 92 24-120 4-123 (230)
213 PF06309 Torsin: Torsin; Inte 90.8 1 2.2E-05 34.3 6.3 33 21-53 48-80 (127)
214 PF00450 Peptidase_S10: Serine 90.8 1.8 3.9E-05 39.1 9.2 96 23-122 38-157 (415)
215 COG1505 Serine proteases of th 90.2 0.61 1.3E-05 44.2 5.5 106 24-131 420-530 (648)
216 PF04083 Abhydro_lipase: Parti 89.0 0.31 6.8E-06 32.3 2.0 38 2-39 19-57 (63)
217 KOG3253|consensus 88.9 0.72 1.6E-05 43.9 5.0 101 24-132 175-282 (784)
218 COG5153 CVT17 Putative lipase 88.2 0.63 1.4E-05 40.4 3.8 25 99-123 274-298 (425)
219 KOG4540|consensus 88.2 0.63 1.4E-05 40.4 3.8 25 99-123 274-298 (425)
220 KOG4569|consensus 86.3 0.95 2.1E-05 40.3 4.1 22 101-122 171-192 (336)
221 PF05705 DUF829: Eukaryotic pr 84.8 4.1 8.8E-05 34.1 7.1 80 27-115 1-81 (240)
222 KOG2182|consensus 84.2 9.8 0.00021 35.6 9.6 104 22-128 83-199 (514)
223 KOG4389|consensus 84.1 1.9 4.1E-05 40.2 4.9 86 27-114 137-231 (601)
224 TIGR03712 acc_sec_asp2 accesso 83.3 14 0.0003 34.6 10.1 90 24-123 288-379 (511)
225 COG0529 CysC Adenylylsulfate k 80.3 15 0.00032 29.9 8.1 41 21-62 18-58 (197)
226 smart00037 CNX Connexin homolo 80.0 1.2 2.5E-05 25.5 1.3 26 177-205 9-34 (34)
227 PF09994 DUF2235: Uncharacteri 79.2 24 0.00052 30.5 9.9 41 82-122 73-113 (277)
228 PF10081 Abhydrolase_9: Alpha/ 79.0 18 0.0004 31.4 8.9 84 50-133 56-144 (289)
229 PF03283 PAE: Pectinacetyleste 78.5 4.3 9.2E-05 36.6 5.2 56 86-141 140-199 (361)
230 PF06441 EHN: Epoxide hydrolas 75.9 1.6 3.4E-05 32.5 1.4 18 22-39 89-106 (112)
231 PF07519 Tannase: Tannase and 73.8 6 0.00013 37.0 5.0 41 96-136 110-150 (474)
232 COG3727 Vsr DNA G:T-mismatch r 73.3 11 0.00024 28.9 5.3 39 23-61 55-114 (150)
233 PF01583 APS_kinase: Adenylyls 71.7 17 0.00038 28.6 6.4 71 25-98 1-75 (156)
234 TIGR00632 vsr DNA mismatch end 68.6 14 0.00031 27.7 5.1 39 23-61 54-113 (117)
235 KOG1202|consensus 68.6 23 0.00049 37.2 7.7 98 21-135 2119-2218(2376)
236 PF10686 DUF2493: Protein of u 65.7 16 0.00034 24.8 4.4 39 24-66 30-70 (71)
237 COG4822 CbiK Cobalamin biosynt 65.7 35 0.00077 28.5 7.2 66 22-108 135-201 (265)
238 COG0541 Ffh Signal recognition 63.1 1E+02 0.0023 28.6 10.4 104 22-126 96-239 (451)
239 KOG2170|consensus 62.8 10 0.00022 33.4 3.7 27 22-48 106-132 (344)
240 PF06792 UPF0261: Uncharacteri 62.6 78 0.0017 29.0 9.5 99 29-130 4-124 (403)
241 smart00827 PKS_AT Acyl transfe 60.9 9.7 0.00021 32.7 3.4 29 91-121 74-102 (298)
242 COG0552 FtsY Signal recognitio 60.6 80 0.0017 28.2 9.0 98 23-141 136-236 (340)
243 PF00698 Acyl_transf_1: Acyl t 56.3 8.8 0.00019 33.6 2.4 29 91-121 76-104 (318)
244 COG4947 Uncharacterized protei 56.0 78 0.0017 25.7 7.4 86 43-133 48-133 (227)
245 PLN03016 sinapoylglucose-malat 55.1 20 0.00043 33.2 4.6 65 56-122 116-186 (433)
246 TIGR03131 malonate_mdcH malona 53.7 15 0.00033 31.6 3.4 27 93-121 70-96 (295)
247 PLN02213 sinapoylglucose-malat 52.0 33 0.00071 30.2 5.3 65 56-122 2-72 (319)
248 COG2939 Carboxypeptidase C (ca 51.7 25 0.00054 33.0 4.5 97 24-124 100-221 (498)
249 KOG2521|consensus 51.5 85 0.0018 28.2 7.8 89 24-117 37-125 (350)
250 COG4425 Predicted membrane pro 51.5 50 0.0011 30.8 6.3 66 50-115 344-411 (588)
251 cd07224 Pat_like Patatin-like 51.3 21 0.00046 29.9 3.8 34 87-120 15-48 (233)
252 KOG1551|consensus 51.2 19 0.00042 31.2 3.5 35 100-134 194-228 (371)
253 cd07210 Pat_hypo_W_succinogene 48.2 38 0.00081 28.2 4.8 33 87-121 16-48 (221)
254 cd07230 Pat_TGL4-5_like Triacy 47.8 15 0.00033 33.8 2.6 36 87-124 89-124 (421)
255 PRK02399 hypothetical protein; 47.5 2.1E+02 0.0046 26.3 9.7 99 29-130 6-126 (406)
256 COG3675 Predicted lipase [Lipi 47.4 22 0.00048 31.0 3.3 25 101-125 175-199 (332)
257 PLN02209 serine carboxypeptida 47.2 30 0.00064 32.1 4.4 64 56-121 118-187 (437)
258 cd07205 Pat_PNPLA6_PNPLA7_NTE1 47.1 42 0.00091 26.4 4.8 33 87-121 16-48 (175)
259 TIGR00128 fabD malonyl CoA-acy 46.0 23 0.00049 30.3 3.3 28 93-122 76-104 (290)
260 PRK05282 (alpha)-aspartyl dipe 45.3 96 0.0021 26.1 6.9 40 24-64 30-70 (233)
261 PF05576 Peptidase_S37: PS-10 45.1 49 0.0011 30.5 5.3 103 22-131 60-164 (448)
262 COG3340 PepE Peptidase E [Amin 44.5 22 0.00048 29.6 2.8 92 25-120 32-136 (224)
263 PTZ00445 p36-lilke protein; Pr 44.0 63 0.0014 27.0 5.3 67 43-113 31-104 (219)
264 cd07207 Pat_ExoU_VipD_like Exo 43.8 48 0.001 26.4 4.7 33 87-121 15-47 (194)
265 PRK00889 adenylylsulfate kinas 43.6 37 0.00081 26.6 4.0 38 25-63 3-40 (175)
266 cd07198 Patatin Patatin-like p 43.6 49 0.0011 26.0 4.7 34 87-122 14-47 (172)
267 PF14253 AbiH: Bacteriophage a 43.2 13 0.00028 31.5 1.3 19 99-117 233-251 (270)
268 PLN02752 [acyl-carrier protein 42.8 27 0.00058 31.0 3.3 29 93-121 112-144 (343)
269 PRK10279 hypothetical protein; 42.6 32 0.00069 30.2 3.7 31 88-120 22-52 (300)
270 COG3887 Predicted signaling pr 42.5 1E+02 0.0023 29.7 7.1 34 100-135 337-377 (655)
271 PF09949 DUF2183: Uncharacteri 41.9 88 0.0019 22.6 5.3 32 99-130 63-96 (100)
272 TIGR03709 PPK2_rel_1 polyphosp 41.3 36 0.00077 29.3 3.7 38 24-62 54-91 (264)
273 COG3673 Uncharacterized conser 40.7 2.7E+02 0.0059 25.0 11.5 22 99-120 120-141 (423)
274 KOG1532|consensus 40.1 57 0.0012 28.6 4.6 43 22-65 15-57 (366)
275 cd07225 Pat_PNPLA6_PNPLA7 Pata 39.0 39 0.00084 29.7 3.7 33 87-121 31-63 (306)
276 cd07227 Pat_Fungal_NTE1 Fungal 38.7 41 0.00088 29.0 3.7 32 88-121 27-58 (269)
277 PRK08762 molybdopterin biosynt 38.1 1.3E+02 0.0027 27.2 7.0 34 99-135 134-168 (376)
278 TIGR03707 PPK2_P_aer polyphosp 38.1 43 0.00093 28.2 3.6 40 22-62 27-66 (230)
279 PF03575 Peptidase_S51: Peptid 38.0 64 0.0014 24.9 4.5 14 102-115 69-82 (154)
280 COG1752 RssA Predicted esteras 37.0 42 0.0009 29.3 3.6 31 89-121 29-59 (306)
281 COG1066 Sms Predicted ATP-depe 36.8 1.3E+02 0.0029 27.8 6.7 63 44-110 158-220 (456)
282 PF00326 Peptidase_S9: Prolyl 36.7 1.3E+02 0.0028 24.1 6.3 44 24-68 143-187 (213)
283 PF07394 DUF1501: Protein of u 35.8 2.3E+02 0.005 25.4 8.4 56 50-106 240-296 (392)
284 PRK14457 ribosomal RNA large s 35.0 1.6E+02 0.0034 26.4 7.0 80 28-121 260-339 (345)
285 COG3640 CooC CO dehydrogenase 34.9 53 0.0011 28.0 3.6 38 28-65 2-39 (255)
286 cd07204 Pat_PNPLA_like Patatin 33.1 57 0.0012 27.5 3.7 33 89-121 17-51 (243)
287 cd03409 Chelatase_Class_II Cla 33.0 1.7E+02 0.0036 20.3 5.7 24 27-50 2-26 (101)
288 cd07232 Pat_PLPL Patain-like p 32.8 29 0.00063 31.9 1.9 38 87-126 83-120 (407)
289 PF08433 KTI12: Chromatin asso 32.8 94 0.002 26.8 5.0 38 27-65 2-39 (270)
290 cd07231 Pat_SDP1-like Sugar-De 32.6 34 0.00073 30.4 2.2 32 88-121 85-116 (323)
291 cd07229 Pat_TGL3_like Triacylg 32.6 34 0.00074 31.2 2.3 38 88-127 100-137 (391)
292 PF02492 cobW: CobW/HypB/UreG, 32.2 40 0.00086 26.8 2.5 22 27-48 1-22 (178)
293 PF01935 DUF87: Domain of unkn 32.2 61 0.0013 26.6 3.7 38 28-65 25-62 (229)
294 cd07228 Pat_NTE_like_bacteria 31.7 1.1E+02 0.0023 24.1 4.9 33 87-121 16-48 (175)
295 TIGR01425 SRP54_euk signal rec 31.3 64 0.0014 29.9 3.9 39 24-63 98-136 (429)
296 cd07209 Pat_hypo_Ecoli_Z1214_l 30.4 99 0.0022 25.4 4.6 34 87-122 14-47 (215)
297 COG2830 Uncharacterized protei 30.4 90 0.002 25.1 4.0 67 26-123 12-79 (214)
298 PF08255 Leader_Trp: Trp-opero 30.2 32 0.00069 15.6 0.9 11 26-36 2-12 (14)
299 PRK12467 peptide synthase; Pro 30.2 2.4E+02 0.0052 34.0 9.0 106 24-140 3691-3799(3956)
300 KOG0370|consensus 29.9 2.9E+02 0.0062 28.7 8.1 103 25-134 919-1025(1435)
301 KOG0780|consensus 29.6 95 0.0021 28.6 4.5 39 22-61 97-135 (483)
302 COG1073 Hydrolases of the alph 29.1 70 0.0015 26.5 3.6 24 100-123 131-154 (299)
303 PF02230 Abhydrolase_2: Phosph 29.0 1.9E+02 0.0041 23.4 6.1 44 25-69 155-199 (216)
304 cd07222 Pat_PNPLA4 Patatin-lik 28.8 69 0.0015 27.0 3.5 31 89-119 17-49 (246)
305 PF01580 FtsK_SpoIIIE: FtsK/Sp 28.7 2.2E+02 0.0048 22.7 6.4 66 28-93 40-115 (205)
306 PF03205 MobB: Molybdopterin g 28.6 49 0.0011 25.3 2.3 39 27-66 1-39 (140)
307 COG2805 PilT Tfp pilus assembl 27.7 2.2E+02 0.0049 25.3 6.4 81 24-108 123-206 (353)
308 cd01819 Patatin_and_cPLA2 Pata 27.6 87 0.0019 24.2 3.7 33 87-119 14-46 (155)
309 COG0331 FabD (acyl-carrier-pro 27.5 63 0.0014 28.5 3.1 28 93-120 77-104 (310)
310 TIGR02802 Pal_lipo peptidoglyc 27.3 2.3E+02 0.0049 20.0 7.6 61 43-109 19-80 (104)
311 TIGR00455 apsK adenylylsulfate 27.2 87 0.0019 24.7 3.7 38 24-62 16-53 (184)
312 PF08250 Sperm_act_pep: Sperm- 26.4 18 0.00039 14.9 -0.2 6 107-112 1-6 (10)
313 TIGR02816 pfaB_fam PfaB family 26.4 68 0.0015 30.7 3.2 26 95-122 261-286 (538)
314 cd07206 Pat_TGL3-4-5_SDP1 Tria 26.0 1.4E+02 0.0031 26.2 5.0 32 88-121 86-117 (298)
315 COG1506 DAP2 Dipeptidyl aminop 25.5 2.6E+02 0.0056 27.1 7.2 46 23-69 549-595 (620)
316 cd07208 Pat_hypo_Ecoli_yjju_li 25.0 1.4E+02 0.0031 25.2 4.8 34 87-121 14-47 (266)
317 KOG1282|consensus 25.0 1.3E+02 0.0029 28.1 4.8 97 24-121 72-188 (454)
318 cd01714 ETF_beta The electron 24.8 3.8E+02 0.0082 21.8 8.7 64 56-133 78-146 (202)
319 PRK03846 adenylylsulfate kinas 24.7 1E+02 0.0023 24.7 3.8 39 23-62 21-59 (198)
320 cd07218 Pat_iPLA2 Calcium-inde 24.7 93 0.002 26.3 3.5 33 89-121 18-50 (245)
321 PLN02757 sirohydrochlorine fer 24.4 2E+02 0.0043 22.5 5.1 34 24-57 13-46 (154)
322 PF08484 Methyltransf_14: C-me 24.1 3.3E+02 0.0072 21.4 6.4 62 72-136 43-104 (160)
323 COG5441 Uncharacterized conser 24.0 5.2E+02 0.011 23.0 8.4 102 26-130 2-122 (401)
324 PF00691 OmpA: OmpA family; I 23.8 2.5E+02 0.0054 19.2 6.7 33 78-110 48-80 (97)
325 cd07212 Pat_PNPLA9 Patatin-lik 23.7 1.2E+02 0.0027 26.6 4.2 35 87-121 15-52 (312)
326 PRK06696 uridine kinase; Valid 23.4 1.2E+02 0.0026 25.0 3.9 37 23-60 19-55 (223)
327 PRK14468 ribosomal RNA large s 22.7 3.7E+02 0.0081 24.0 7.1 90 28-131 251-340 (343)
328 PF08373 RAP: RAP domain; Int 22.6 93 0.002 19.4 2.5 22 43-64 19-40 (58)
329 PRK14456 ribosomal RNA large s 22.2 3.2E+02 0.0069 24.7 6.6 80 28-121 283-362 (368)
330 TIGR00959 ffh signal recogniti 22.2 1.4E+02 0.003 27.7 4.4 42 23-64 96-137 (428)
331 PF03976 PPK2: Polyphosphate k 22.1 28 0.00061 29.3 -0.1 38 24-62 29-66 (228)
332 KOG0094|consensus 21.8 2.1E+02 0.0045 23.8 4.8 72 35-120 76-152 (221)
333 PRK00923 sirohydrochlorin coba 21.6 2.7E+02 0.0058 20.5 5.2 25 26-50 3-27 (126)
334 COG4088 Predicted nucleotide k 21.4 97 0.0021 26.1 2.8 34 27-61 2-35 (261)
335 PRK08335 translation initiatio 21.2 4.2E+02 0.0091 22.9 6.9 35 27-65 111-145 (275)
336 PRK14489 putative bifunctional 21.1 80 0.0017 28.4 2.6 42 25-67 204-245 (366)
337 PF08357 SEFIR: SEFIR domain; 21.1 72 0.0016 24.3 2.0 34 26-60 1-35 (150)
338 COG1763 MobB Molybdopterin-gua 21.0 1.8E+02 0.004 23.0 4.3 41 26-67 2-42 (161)
339 PF11713 Peptidase_C80: Peptid 20.8 1.2E+02 0.0026 23.8 3.2 37 77-113 77-116 (157)
340 PF13207 AAA_17: AAA domain; P 20.6 94 0.002 22.3 2.5 32 28-63 1-32 (121)
341 PF13191 AAA_16: AAA ATPase do 20.5 78 0.0017 24.5 2.2 44 22-66 20-63 (185)
342 PF12242 Eno-Rase_NADH_b: NAD( 20.5 3E+02 0.0066 19.0 4.8 40 84-123 21-62 (78)
343 cd03146 GAT1_Peptidase_E Type 20.3 1.6E+02 0.0035 24.0 4.1 89 24-117 30-129 (212)
344 cd03413 CbiK_C Anaerobic cobal 20.3 3.4E+02 0.0074 19.5 6.1 25 27-53 3-27 (103)
No 1
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=100.00 E-value=2.1e-65 Score=450.27 Aligned_cols=239 Identities=36% Similarity=0.584 Sum_probs=187.4
Q ss_pred CceEEecCCCCccccCCCCCCCCeEEEEeCCCCCC-CCChHHHHHHHHHhc--CCcEEEEEcCCCCCCCCChHHHhhcHH
Q psy16575 4 TKTRINILKSNSLKYAGWDPHKRNVIIIHGFNQSE-SQSPMTIIRDAYIRR--RDYNVFMLDFADLAPFPCYLSSLSNTR 80 (247)
Q Consensus 4 ~g~~i~~~~~~~l~~s~~~~~~~~vv~iHG~~~~~-~~~~~~~l~~~~l~~--~~~~Vi~vD~~~~~~~~~y~~~~~~~~ 80 (247)
+.+.|..++.+++..+.|++++|++|+||||.++. +..|...++++++++ +++|||+|||+..+.. .|..++.+++
T Consensus 50 ~~~~l~~~~~~~l~~s~fn~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~-~Y~~a~~n~~ 128 (331)
T PF00151_consen 50 NPQLLDNGDPESLRNSNFNPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN-NYPQAVANTR 128 (331)
T ss_dssp CEEEEBTSSTHHHHTSS--TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS--HHHHHHHHH
T ss_pred ceeEeccCCcccccccccCCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc-cccchhhhHH
Confidence 45677778899999999999999999999999999 678999999989998 7999999999988776 6999999999
Q ss_pred HHHHHHHHHHHHHH-HcCCCCccEEEEEechhhHHHhhhhhhccC--cccceeeecCCCccccccCCcccccCcCCCCee
Q psy16575 81 LVAQCAAQFYSHLT-HHGASAYDIHCVGHSLGAHICGMMSNHLTH--RMHKIIGIDPARPLVDRYGDKAFRLTRDDANFV 157 (247)
Q Consensus 81 ~v~~~l~~~i~~l~-~~~~~~~~i~liGhSlGg~va~~~a~~~~~--~v~~i~~LdPa~p~f~~~~~~~~rL~~~dA~~V 157 (247)
.|++.++++|..|. ..++++++|||||||||||||+++|+.+.. +|+||+|||||+|+|+..... .||+++||+||
T Consensus 129 ~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F~~~~~~-~rL~~~DA~fV 207 (331)
T PF00151_consen 129 LVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLFENNPPS-ERLDKSDAKFV 207 (331)
T ss_dssp HHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTTTTS-TT-TS--GGGSSEE
T ss_pred HHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccccCCChh-HhhhccCCceE
Confidence 99999999999987 789999999999999999999999999987 999999999999999876443 49999999999
Q ss_pred eEEEeCC-----CCCCCCCcccceeeecCCCcCCCCCCCccc-ccccccccccchHHHHHhhccCCCCCceeeeCCCCCC
Q psy16575 158 QVIHTNA-----WFLGEAPQVGHVDFCVNGGRMQPSCTKEGR-MIRRARCSHFMGACFFAATVSERGRRHQGHPCSLSCT 231 (247)
Q Consensus 158 ~viht~~-----~~~G~~~~~g~~dfy~ngg~~qPgc~~~~~-~~~~~~CsH~ra~~~~~~si~~~~~~f~~~~c~~~~~ 231 (247)
||||||+ +.+|+.+|+||+|||||||..||||..... ......|||.||++||+|||.++ +.|+|++|+++.+
T Consensus 208 dvIHT~~~~~~~~~~G~~~~~Gh~DFYpNgG~~QPGC~~~~~~~~~~~~CsH~ra~~~f~eSi~~~-~~f~a~~C~s~~~ 286 (331)
T PF00151_consen 208 DVIHTNAGTLPGGGLGTSEPIGHVDFYPNGGRRQPGCGNDSLELTRFISCSHMRAVEYFAESINNP-CNFPAVRCSSYDS 286 (331)
T ss_dssp EEE-SSES-HHH-SSBESS--SSEEEEETTTTS-TTSSS-CHTTCSHHHHHHHHHHHHHHHHHHST-TTTB-EE-S-HHH
T ss_pred EEEEcCCccccCCccccccccccceeecCCCccCCCCccccccceecchhhhHHHHHHHHHHhcCC-CCceeEeCcCHHH
Confidence 9999999 899999999999999999999999976432 12235799999999999999998 8999999999755
Q ss_pred CCCC-------CCcccCCCCC
Q psy16575 232 GRLG-------PGTVSMGEHT 245 (247)
Q Consensus 232 ~~~~-------~~~~~mg~~~ 245 (247)
+..| ..+..||+++
T Consensus 287 ~~~g~C~~c~~~~~~~mG~~~ 307 (331)
T PF00151_consen 287 FLAGKCDGCNNNRCAVMGYHA 307 (331)
T ss_dssp HHTTTS-S--TT---BSSGGG
T ss_pred HhhcccccCCCCCCcCCCCCc
Confidence 5333 2689999984
No 2
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=100.00 E-value=2.1e-62 Score=442.20 Aligned_cols=241 Identities=27% Similarity=0.420 Sum_probs=206.1
Q ss_pred ceEEecCCCCccccCCCCCCCCeEEEEeCCCCCCC-CChHHHHHHHHHhc-CCcEEEEEcCCCCCCCCChHHHhhcHHHH
Q psy16575 5 KTRINILKSNSLKYAGWDPHKRNVIIIHGFNQSES-QSPMTIIRDAYIRR-RDYNVFMLDFADLAPFPCYLSSLSNTRLV 82 (247)
Q Consensus 5 g~~i~~~~~~~l~~s~~~~~~~~vv~iHG~~~~~~-~~~~~~l~~~~l~~-~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v 82 (247)
.|+|.++++++|..++|++++|++|+||||.++.. ..|...++++++.+ .++|||++||++++.+ .|..+..+++.+
T Consensus 21 ~~~l~~~~~~si~~s~Fn~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s-~y~~a~~~t~~v 99 (442)
T TIGR03230 21 TCYIVPGQPDSIADCNFNHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQ-HYPTSAAYTKLV 99 (442)
T ss_pred ceEEecCChhhhhhcCcCCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCC-CCccccccHHHH
Confidence 46899999999999999999999999999998653 34777788777654 3699999999999877 477777888999
Q ss_pred HHHHHHHHHHHH-HcCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCCccccccCCcccccCcCCCCeeeEEE
Q psy16575 83 AQCAAQFYSHLT-HHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARPLVDRYGDKAFRLTRDDANFVQVIH 161 (247)
Q Consensus 83 ~~~l~~~i~~l~-~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p~f~~~~~~~~rL~~~dA~~V~vih 161 (247)
++.++++++.|. +.+++++++||||||||||||+++++..+++|+||++||||+|+|...... .||+++||+||||||
T Consensus 100 g~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~F~~~~~~-~rLd~~DA~fVdVIH 178 (442)
T TIGR03230 100 GKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPTFEYADAP-STLSPDDADFVDVLH 178 (442)
T ss_pred HHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCcccccccc-cccCCCCCCeEEEEE
Confidence 999999999975 467778999999999999999999999999999999999999999876543 599999999999999
Q ss_pred eCCC-----CCCCCCcccceeeecCCCcCCCCCCCcccc-----------cccccccccchHHHHHhhccCCCCCceeee
Q psy16575 162 TNAW-----FLGEAPQVGHVDFCVNGGRMQPSCTKEGRM-----------IRRARCSHFMGACFFAATVSERGRRHQGHP 225 (247)
Q Consensus 162 t~~~-----~~G~~~~~g~~dfy~ngg~~qPgc~~~~~~-----------~~~~~CsH~ra~~~~~~si~~~~~~f~~~~ 225 (247)
||++ .+|+.+|+||+|||||||..||||+..... .....|||.||++||+|||.++.+.|+|++
T Consensus 179 Td~~~~~~~~lG~~~piGh~DFYPNGG~~QPGC~~~~~~~~~~~~~~~~~~~~~~CsH~Ra~~~f~eSi~~~~~~f~a~~ 258 (442)
T TIGR03230 179 TNTRGSPDRSIGIQRPVGHIDIYPNGGTFQPGCDIQETLLVIAEKGLGNMDQLVKCSHERSIHLFIDSLLNEENPSMAYR 258 (442)
T ss_pred ecCCccccccccccccccceEeccCCCCCCCCCCccccccccccccccccCcCccchhHHHHHHHHHHhcccCCCeeeEE
Confidence 9985 589999999999999999999999753211 112589999999999999976447999999
Q ss_pred CCCCCCCCCCC-------CcccCCCCCCC
Q psy16575 226 CSLSCTGRLGP-------GTVSMGEHTPI 247 (247)
Q Consensus 226 c~~~~~~~~~~-------~~~~mg~~~~~ 247 (247)
|+++.++..|. .|..||+++++
T Consensus 259 C~s~~~f~~g~C~~c~~~~c~~mG~~~~~ 287 (442)
T TIGR03230 259 CSSKEAFNKGLCLSCRKNRCNKLGYEINK 287 (442)
T ss_pred CCCHHHHhcCCCCCCCCCCCceeCccccc
Confidence 99986664332 58899998863
No 3
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=100.00 E-value=8.6e-61 Score=413.14 Aligned_cols=241 Identities=35% Similarity=0.554 Sum_probs=209.0
Q ss_pred CceEEecCCCCccccCCCCCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHH
Q psy16575 4 TKTRINILKSNSLKYAGWDPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVA 83 (247)
Q Consensus 4 ~g~~i~~~~~~~l~~s~~~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~ 83 (247)
+++.|...+..++..+.|++++|++|+||||.++....|...++++++++.++||+++||++.+.. .|..+..+++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~-~y~~a~~~~~~v~ 93 (275)
T cd00707 15 CPQLLFADDPSSLKNSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANP-NYPQAVNNTRVVG 93 (275)
T ss_pred CceEecCCChhhhhhcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECcccccc-ChHHHHHhHHHHH
Confidence 467787777888999999999999999999999886668888888888887899999999988544 6888888899999
Q ss_pred HHHHHHHHHHHH-cCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCCccccccCCcccccCcCCCCeeeEEEe
Q psy16575 84 QCAAQFYSHLTH-HGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARPLVDRYGDKAFRLTRDDANFVQVIHT 162 (247)
Q Consensus 84 ~~l~~~i~~l~~-~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p~f~~~~~~~~rL~~~dA~~V~viht 162 (247)
+.++++++.|.+ .+++.++++|||||||||||+++++.++++|++|++||||+|+|...... .||+++||+|||+|||
T Consensus 94 ~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~f~~~~~~-~rl~~~dA~~V~vihT 172 (275)
T cd00707 94 AELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPLFSGADPE-DRLDPSDAQFVDVIHT 172 (275)
T ss_pred HHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcccccCCCcc-cccCCCCCCeEEEEEe
Confidence 999999999864 46777999999999999999999999999999999999999999875433 4999999999999999
Q ss_pred CCCCCCCCCcccceeeecCCCcCCCCCCCcccccccccccccchHHHHHhhccCCCCCceeeeCCCCCCCCCCC------
Q psy16575 163 NAWFLGEAPQVGHVDFCVNGGRMQPSCTKEGRMIRRARCSHFMGACFFAATVSERGRRHQGHPCSLSCTGRLGP------ 236 (247)
Q Consensus 163 ~~~~~G~~~~~g~~dfy~ngg~~qPgc~~~~~~~~~~~CsH~ra~~~~~~si~~~~~~f~~~~c~~~~~~~~~~------ 236 (247)
|++.+|+..|+||+|||||||..||||+..........|||.||++||+|||..+ +.|+|++|+++.++..+.
T Consensus 173 ~~~~~G~~~~~gh~dfypngg~~QpgC~~~~~~~~~~~CsH~ra~~~~~esi~~~-~~f~a~~C~~~~~~~~~~C~~~~~ 251 (275)
T cd00707 173 DGGLLGFSQPIGHADFYPNGGRDQPGCPKDILSSDFVACSHQRAVHYFAESILSP-CGFVAYPCSSYDEFLAGKCFPCGS 251 (275)
T ss_pred CCCCCCccccccceEeccCCCCCCCCCCCccccccccccchHHHHHHHHHHccCC-CCceeEeCCCHHHHhcCCCCCCCC
Confidence 9999999999999999999999999997632111235899999999999999987 999999999986653332
Q ss_pred CcccCCCCCCC
Q psy16575 237 GTVSMGEHTPI 247 (247)
Q Consensus 237 ~~~~mg~~~~~ 247 (247)
.++.||+++++
T Consensus 252 ~~~~mG~~~~~ 262 (275)
T cd00707 252 GCVRMGYHADR 262 (275)
T ss_pred CCcccCCccCC
Confidence 38999998763
No 4
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.64 E-value=2e-15 Score=131.62 Aligned_cols=107 Identities=10% Similarity=0.087 Sum_probs=80.1
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHH-HhhcHHHHHHHHHHHHHHHHHcCCCCc
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLS-SLSNTRLVAQCAAQFYSHLTHHGASAY 101 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~-~~~~~~~v~~~l~~~i~~l~~~~~~~~ 101 (247)
++.|+|||||||.++.. .|..+.+ .|.+.+|+|+++|+++++.+..... .....+..++++.++++. .+ .+
T Consensus 44 ~~~~~lvliHG~~~~~~--~w~~~~~-~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~---l~--~~ 115 (302)
T PRK00870 44 ADGPPVLLLHGEPSWSY--LYRKMIP-ILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQ---LD--LT 115 (302)
T ss_pred CCCCEEEEECCCCCchh--hHHHHHH-HHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHH---cC--CC
Confidence 34689999999987763 4566666 5665579999999999987732111 123445555666665554 33 37
Q ss_pred cEEEEEechhhHHHhhhhhhccCcccceeeecCCCc
Q psy16575 102 DIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARP 137 (247)
Q Consensus 102 ~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p 137 (247)
+++||||||||.+|..++...|++|.+++.++|..|
T Consensus 116 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 151 (302)
T PRK00870 116 DVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLP 151 (302)
T ss_pred CEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCC
Confidence 899999999999999999999999999999997644
No 5
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.60 E-value=1.1e-14 Score=126.42 Aligned_cols=123 Identities=11% Similarity=0.097 Sum_probs=88.1
Q ss_pred ceEEecCCCCccccCCCCCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChH------HHhhc
Q psy16575 5 KTRINILKSNSLKYAGWDPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYL------SSLSN 78 (247)
Q Consensus 5 g~~i~~~~~~~l~~s~~~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~------~~~~~ 78 (247)
.+.+++.... +......+..|+|||+|||.++.. .|..+.. .|.+. ++|+++|+++++.+.... ....+
T Consensus 10 ~~~~~~~~~~-i~y~~~G~~~~~vlllHG~~~~~~--~w~~~~~-~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~ 84 (294)
T PLN02824 10 TRTWRWKGYN-IRYQRAGTSGPALVLVHGFGGNAD--HWRKNTP-VLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYT 84 (294)
T ss_pred CceEEEcCeE-EEEEEcCCCCCeEEEECCCCCChh--HHHHHHH-HHHhC-CeEEEEcCCCCCCCCCCccccccccccCC
Confidence 3445544333 222222334589999999998874 4556665 45554 899999999999874221 12345
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCCc
Q psy16575 79 TRLVAQCAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARP 137 (247)
Q Consensus 79 ~~~v~~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p 137 (247)
.+..++++..+++.+ + .++++|+||||||.+|..++...|++|.+++.++|+.+
T Consensus 85 ~~~~a~~l~~~l~~l---~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~ 138 (294)
T PLN02824 85 FETWGEQLNDFCSDV---V--GDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLR 138 (294)
T ss_pred HHHHHHHHHHHHHHh---c--CCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcc
Confidence 667777777776654 3 37999999999999999999999999999999998653
No 6
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.59 E-value=1.2e-14 Score=128.25 Aligned_cols=128 Identities=16% Similarity=0.282 Sum_probs=89.8
Q ss_pred EEecCCCCccccCCC-----CCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHH
Q psy16575 7 RINILKSNSLKYAGW-----DPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRL 81 (247)
Q Consensus 7 ~i~~~~~~~l~~s~~-----~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~ 81 (247)
.+...+...|....+ .+.+++|||+|||..+... .+..+.. .|.+.||+|+++|+++++.+............
T Consensus 36 ~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~-~~~~~~~-~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~ 113 (330)
T PLN02298 36 FFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISW-TFQSTAI-FLAQMGFACFALDLEGHGRSEGLRAYVPNVDL 113 (330)
T ss_pred eEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcce-ehhHHHH-HHHhCCCEEEEecCCCCCCCCCccccCCCHHH
Confidence 444444554543222 1346789999999866521 2344454 56666899999999999987422222235666
Q ss_pred HHHHHHHHHHHHHHc-CCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 82 VAQCAAQFYSHLTHH-GASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 82 v~~~l~~~i~~l~~~-~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
..+++..+++.+... ..+..+++|+||||||.+|..++...|+++.+++.++|..
T Consensus 114 ~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~ 169 (330)
T PLN02298 114 VVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMC 169 (330)
T ss_pred HHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccc
Confidence 778888888887542 2333579999999999999999998999999999998864
No 7
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.58 E-value=1.8e-14 Score=124.34 Aligned_cols=114 Identities=14% Similarity=0.132 Sum_probs=80.6
Q ss_pred cccCCCCCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHH
Q psy16575 16 LKYAGWDPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTH 95 (247)
Q Consensus 16 l~~s~~~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~ 95 (247)
+.+-+-+.++|+|||+||++.+.. .|..+.. .|++.||+|+++|+++++.+........+.....+.+.++++.
T Consensus 9 ~~~~~~~~~~p~vvliHG~~~~~~--~w~~~~~-~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~--- 82 (273)
T PLN02211 9 VTDMKPNRQPPHFVLIHGISGGSW--CWYKIRC-LMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSS--- 82 (273)
T ss_pred cccccccCCCCeEEEECCCCCCcC--cHHHHHH-HHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHh---
Confidence 333333456789999999888774 3566665 6666679999999999886521111113444444455544443
Q ss_pred cCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 96 HGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 96 ~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
.. ..++++||||||||.++..++..++++|.+++.+++..
T Consensus 83 l~-~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~ 122 (273)
T PLN02211 83 LP-ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATM 122 (273)
T ss_pred cC-CCCCEEEEEECchHHHHHHHHHhChhheeEEEEecccc
Confidence 32 13799999999999999999998999999999997653
No 8
>PLN02965 Probable pheophorbidase
Probab=99.57 E-value=1.5e-14 Score=123.20 Aligned_cols=103 Identities=14% Similarity=0.147 Sum_probs=76.3
Q ss_pred eEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEEE
Q psy16575 27 NVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHCV 106 (247)
Q Consensus 27 ~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~li 106 (247)
.|||+|||+.+.. .|..+.. .|+..+|+|+++|+++++.+.............++++.++++.+ +. .++++||
T Consensus 5 ~vvllHG~~~~~~--~w~~~~~-~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l---~~-~~~~~lv 77 (255)
T PLN02965 5 HFVFVHGASHGAW--CWYKLAT-LLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL---PP-DHKVILV 77 (255)
T ss_pred EEEEECCCCCCcC--cHHHHHH-HHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc---CC-CCCEEEE
Confidence 4999999987763 3556665 55455799999999999977421112234555556666665543 32 1599999
Q ss_pred EechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 107 GHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 107 GhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
||||||.|+..++..+|++|.+++.++++.
T Consensus 78 GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~ 107 (255)
T PLN02965 78 GHSIGGGSVTEALCKFTDKISMAIYVAAAM 107 (255)
T ss_pred ecCcchHHHHHHHHhCchheeEEEEEcccc
Confidence 999999999999999999999999999764
No 9
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.56 E-value=1.7e-14 Score=124.13 Aligned_cols=104 Identities=15% Similarity=0.175 Sum_probs=81.0
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCcc
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYD 102 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~ 102 (247)
+.+++|||+|||.++.. .|..+.+ .|.+ +|+|+++|+++++.+.. .......+.+++++.++++.+ ..++
T Consensus 23 ~~~~plvllHG~~~~~~--~w~~~~~-~L~~-~~~vi~~Dl~G~G~S~~-~~~~~~~~~~~~~~~~~i~~l-----~~~~ 92 (276)
T TIGR02240 23 EGLTPLLIFNGIGANLE--LVFPFIE-ALDP-DLEVIAFDVPGVGGSST-PRHPYRFPGLAKLAARMLDYL-----DYGQ 92 (276)
T ss_pred CCCCcEEEEeCCCcchH--HHHHHHH-Hhcc-CceEEEECCCCCCCCCC-CCCcCcHHHHHHHHHHHHHHh-----CcCc
Confidence 34579999999988874 4556665 5665 49999999999998742 122334566666777666654 3478
Q ss_pred EEEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 103 IHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 103 i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
++|+||||||.+|..++...|++|.+++.++|+.
T Consensus 93 ~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~ 126 (276)
T TIGR02240 93 VNAIGVSWGGALAQQFAHDYPERCKKLILAATAA 126 (276)
T ss_pred eEEEEECHHHHHHHHHHHHCHHHhhheEEeccCC
Confidence 9999999999999999999999999999999874
No 10
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.56 E-value=2.6e-14 Score=127.39 Aligned_cols=111 Identities=15% Similarity=0.186 Sum_probs=81.5
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHH-cCCCCcc
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTH-HGASAYD 102 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~-~~~~~~~ 102 (247)
.+++|||+|||+++.. .++..++. .|.+.||+|+++|+++++.+..-.....+...+.+++.++++.+.. ...+..+
T Consensus 86 ~~~~iv~lHG~~~~~~-~~~~~~~~-~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~ 163 (349)
T PLN02385 86 PKAAVCFCHGYGDTCT-FFFEGIAR-KIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLP 163 (349)
T ss_pred CCeEEEEECCCCCccc-hHHHHHHH-HHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCC
Confidence 4678999999988763 24566665 5555679999999999987742111112445556666666666542 2233458
Q ss_pred EEEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 103 IHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 103 i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
++|+||||||.||..++...|+++.+++.++|+.
T Consensus 164 ~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~ 197 (349)
T PLN02385 164 SFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMC 197 (349)
T ss_pred EEEEEeccchHHHHHHHHhCcchhhheeEecccc
Confidence 9999999999999999999999999999999864
No 11
>PHA02857 monoglyceride lipase; Provisional
Probab=99.55 E-value=6e-14 Score=120.42 Aligned_cols=107 Identities=17% Similarity=0.167 Sum_probs=75.5
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEE
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIH 104 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~ 104 (247)
+++||++|||.++. ..+..+++ +|.+.||.|+++|+++++.+..............+++.+.++.+... .+.++++
T Consensus 25 ~~~v~llHG~~~~~--~~~~~~~~-~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~-~~~~~~~ 100 (276)
T PHA02857 25 KALVFISHGAGEHS--GRYEELAE-NISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKST-YPGVPVF 100 (276)
T ss_pred CEEEEEeCCCcccc--chHHHHHH-HHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhh-CCCCCEE
Confidence 56788889998776 45677776 56666899999999999987432111122222223333444333221 2346899
Q ss_pred EEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 105 CVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 105 liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
|+||||||.+|..++...|+++++++.++|.
T Consensus 101 lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~ 131 (276)
T PHA02857 101 LLGHSMGATISILAAYKNPNLFTAMILMSPL 131 (276)
T ss_pred EEEcCchHHHHHHHHHhCccccceEEEeccc
Confidence 9999999999999998899999999999885
No 12
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.54 E-value=4.8e-14 Score=118.35 Aligned_cols=99 Identities=16% Similarity=0.142 Sum_probs=74.0
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEE
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIH 104 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~ 104 (247)
+|+||++|||.++.. .|..+.+ .|+ +|+|+++|+++++.+... ...+....++++.++++. .+ .++++
T Consensus 2 ~p~vvllHG~~~~~~--~w~~~~~-~l~--~~~vi~~D~~G~G~S~~~--~~~~~~~~~~~l~~~l~~---~~--~~~~~ 69 (242)
T PRK11126 2 LPWLVFLHGLLGSGQ--DWQPVGE-ALP--DYPRLYIDLPGHGGSAAI--SVDGFADVSRLLSQTLQS---YN--ILPYW 69 (242)
T ss_pred CCEEEEECCCCCChH--HHHHHHH-HcC--CCCEEEecCCCCCCCCCc--cccCHHHHHHHHHHHHHH---cC--CCCeE
Confidence 588999999998874 4566666 453 599999999999887422 122455555555555543 34 47999
Q ss_pred EEEechhhHHHhhhhhhccC-cccceeeecCC
Q psy16575 105 CVGHSLGAHICGMMSNHLTH-RMHKIIGIDPA 135 (247)
Q Consensus 105 liGhSlGg~va~~~a~~~~~-~v~~i~~LdPa 135 (247)
+|||||||.+|..++...+. ++.+|+.+++.
T Consensus 70 lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 70 LVGYSLGGRIAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred EEEECHHHHHHHHHHHhCCcccccEEEEeCCC
Confidence 99999999999999888864 59999987755
No 13
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.54 E-value=5.1e-14 Score=117.83 Aligned_cols=105 Identities=20% Similarity=0.217 Sum_probs=78.2
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCcc
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYD 102 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~ 102 (247)
.++|+||++|||+++.. .+..+.. .+.+ +|+|+++|+++++.+........+.....+.+.++++.+ + .++
T Consensus 11 ~~~~~iv~lhG~~~~~~--~~~~~~~-~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~---~--~~~ 81 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGS--YWAPQLD-VLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL---N--IER 81 (257)
T ss_pred CCCCEEEEEcCCCcchh--HHHHHHH-HHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh---C--CCc
Confidence 45789999999998873 4555554 5565 599999999999876422222234555556666665543 3 478
Q ss_pred EEEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 103 IHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 103 i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
++|+||||||.+|..++...++++.+++.+++..
T Consensus 82 ~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~ 115 (257)
T TIGR03611 82 FHFVGHALGGLIGLQLALRYPERLLSLVLINAWS 115 (257)
T ss_pred EEEEEechhHHHHHHHHHHChHHhHHheeecCCC
Confidence 9999999999999999888888999999998754
No 14
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.53 E-value=5.9e-14 Score=118.55 Aligned_cols=102 Identities=18% Similarity=0.270 Sum_probs=77.3
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCcc
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYD 102 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~ 102 (247)
.++|+||++||+.++.. .+..+.. .|.+ +|+|+++|+++++.+. .. ........++++..+++. .+ .++
T Consensus 14 ~~~~~iv~lhG~~~~~~--~~~~~~~-~l~~-~~~vi~~D~~G~G~s~-~~-~~~~~~~~~~d~~~~l~~---l~--~~~ 82 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLD--NLGVLAR-DLVN-DHDIIQVDMRNHGLSP-RD-PVMNYPAMAQDLLDTLDA---LQ--IEK 82 (255)
T ss_pred CCCCCEEEECCCCCchh--HHHHHHH-HHhh-CCeEEEECCCCCCCCC-CC-CCCCHHHHHHHHHHHHHH---cC--CCc
Confidence 45789999999988874 4566665 4554 5999999999998763 21 123445555555555544 33 378
Q ss_pred EEEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 103 IHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 103 i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
++|+||||||.+|..++...+++|.+++.++++
T Consensus 83 ~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~ 115 (255)
T PRK10673 83 ATFIGHSMGGKAVMALTALAPDRIDKLVAIDIA 115 (255)
T ss_pred eEEEEECHHHHHHHHHHHhCHhhcceEEEEecC
Confidence 999999999999999999999999999999865
No 15
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.53 E-value=6.4e-14 Score=118.96 Aligned_cols=101 Identities=9% Similarity=0.212 Sum_probs=73.5
Q ss_pred CCCCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCC
Q psy16575 20 GWDPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGAS 99 (247)
Q Consensus 20 ~~~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~ 99 (247)
......|+|||||||.++.. .|..+.. .|.+. |+|+++|+++++.+..+. ..+... +++.+.+..
T Consensus 8 ~~G~g~~~ivllHG~~~~~~--~w~~~~~-~L~~~-~~vi~~Dl~G~G~S~~~~--~~~~~~-------~~~~l~~~~-- 72 (256)
T PRK10349 8 TKGQGNVHLVLLHGWGLNAE--VWRCIDE-ELSSH-FTLHLVDLPGFGRSRGFG--ALSLAD-------MAEAVLQQA-- 72 (256)
T ss_pred hcCCCCCeEEEECCCCCChh--HHHHHHH-HHhcC-CEEEEecCCCCCCCCCCC--CCCHHH-------HHHHHHhcC--
Confidence 33333457999999988874 4556665 56654 999999999998774321 122222 222222333
Q ss_pred CccEEEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 100 AYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 100 ~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
.++++||||||||.+|..++...|++|.+++.++|+
T Consensus 73 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~ 108 (256)
T PRK10349 73 PDKAIWLGWSLGGLVASQIALTHPERVQALVTVASS 108 (256)
T ss_pred CCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCc
Confidence 379999999999999999999999999999999985
No 16
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.53 E-value=1.1e-13 Score=117.31 Aligned_cols=105 Identities=14% Similarity=0.132 Sum_probs=76.7
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHH--hhcHHHHHHHHHHHHHHHHHcCCCCcc
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSS--LSNTRLVAQCAAQFYSHLTHHGASAYD 102 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~--~~~~~~v~~~l~~~i~~l~~~~~~~~~ 102 (247)
+++||++||+.++.. .++..+.. ++.+.||+|+++|+++++.+...... ..+...+.+++..+++. .+ .++
T Consensus 25 ~~~vl~~hG~~g~~~-~~~~~~~~-~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~ 97 (288)
T TIGR01250 25 KIKLLLLHGGPGMSH-EYLENLRE-LLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREK---LG--LDK 97 (288)
T ss_pred CCeEEEEcCCCCccH-HHHHHHHH-HHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHH---cC--CCc
Confidence 689999999876654 35555554 67766799999999998876321111 13455555555555443 33 367
Q ss_pred EEEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 103 IHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 103 i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
++|+||||||.++..++...|.++.+++.++++.
T Consensus 98 ~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 98 FYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred EEEEEeehHHHHHHHHHHhCccccceeeEecccc
Confidence 9999999999999999999999999999887653
No 17
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.53 E-value=8.1e-14 Score=113.51 Aligned_cols=101 Identities=22% Similarity=0.336 Sum_probs=76.9
Q ss_pred EEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHH-HhhcHHHHHHHHHHHHHHHHHcCCCCccEEEE
Q psy16575 28 VIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLS-SLSNTRLVAQCAAQFYSHLTHHGASAYDIHCV 106 (247)
Q Consensus 28 vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~-~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~li 106 (247)
|||+||+.++. ..+..+.+ .|+ .+|+|+++|+++++.+..... .....+..++++.++++. .+. ++++|+
T Consensus 1 vv~~hG~~~~~--~~~~~~~~-~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~---~~~--~~~~lv 71 (228)
T PF12697_consen 1 VVFLHGFGGSS--ESWDPLAE-ALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDA---LGI--KKVILV 71 (228)
T ss_dssp EEEE-STTTTG--GGGHHHHH-HHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHH---TTT--SSEEEE
T ss_pred eEEECCCCCCH--HHHHHHHH-HHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccc---ccc--cccccc
Confidence 79999999988 45667776 555 579999999999988743221 233455555555555544 343 799999
Q ss_pred EechhhHHHhhhhhhccCcccceeeecCCCc
Q psy16575 107 GHSLGAHICGMMSNHLTHRMHKIIGIDPARP 137 (247)
Q Consensus 107 GhSlGg~va~~~a~~~~~~v~~i~~LdPa~p 137 (247)
|||+||.++..++...|++|.+++.++|...
T Consensus 72 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 72 GHSMGGMIALRLAARYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp EETHHHHHHHHHHHHSGGGEEEEEEESESSS
T ss_pred ccccccccccccccccccccccceeeccccc
Confidence 9999999999999999999999999998874
No 18
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.52 E-value=9.5e-14 Score=120.48 Aligned_cols=102 Identities=15% Similarity=0.111 Sum_probs=79.0
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccE
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDI 103 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i 103 (247)
+.|+|||+||+.++. ..|..+.+ .|.+. ++|+++|+++++.++. ..........++++..+++.+ + .+++
T Consensus 26 ~g~~vvllHG~~~~~--~~w~~~~~-~L~~~-~~via~D~~G~G~S~~-~~~~~~~~~~a~dl~~ll~~l---~--~~~~ 95 (295)
T PRK03592 26 EGDPIVFLHGNPTSS--YLWRNIIP-HLAGL-GRCLAPDLIGMGASDK-PDIDYTFADHARYLDAWFDAL---G--LDDV 95 (295)
T ss_pred CCCEEEEECCCCCCH--HHHHHHHH-HHhhC-CEEEEEcCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHh---C--CCCe
Confidence 458999999998777 34666766 45554 6999999999998742 222235566666666666554 3 3799
Q ss_pred EEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 104 HCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 104 ~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
+|+||||||.||..++...|++|++|+.++|.
T Consensus 96 ~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 127 (295)
T PRK03592 96 VLVGHDWGSALGFDWAARHPDRVRGIAFMEAI 127 (295)
T ss_pred EEEEECHHHHHHHHHHHhChhheeEEEEECCC
Confidence 99999999999999999999999999999973
No 19
>PRK10749 lysophospholipase L2; Provisional
Probab=99.51 E-value=1.7e-13 Score=121.28 Aligned_cols=119 Identities=15% Similarity=0.165 Sum_probs=84.3
Q ss_pred CccccCCCC--CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHH-----HhhcHHHHHHHH
Q psy16575 14 NSLKYAGWD--PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLS-----SLSNTRLVAQCA 86 (247)
Q Consensus 14 ~~l~~s~~~--~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~-----~~~~~~~v~~~l 86 (247)
..+....+. ..+++||++||+.++. ..+..++..+ .+.||+|+++|+++++.+..... .........+++
T Consensus 41 ~~l~~~~~~~~~~~~~vll~HG~~~~~--~~y~~~~~~l-~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~ 117 (330)
T PRK10749 41 IPIRFVRFRAPHHDRVVVICPGRIESY--VKYAELAYDL-FHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDL 117 (330)
T ss_pred CEEEEEEccCCCCCcEEEEECCccchH--HHHHHHHHHH-HHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHH
Confidence 334444443 3467999999998776 3466666544 44679999999999997742110 112455666677
Q ss_pred HHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 87 AQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 87 ~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
..+++.+... .+..+++|+||||||.++..++...|+++++++.++|+.
T Consensus 118 ~~~~~~~~~~-~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~ 166 (330)
T PRK10749 118 AAFWQQEIQP-GPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMF 166 (330)
T ss_pred HHHHHHHHhc-CCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchh
Confidence 7776654322 234789999999999999988888899999999998864
No 20
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.51 E-value=1.3e-13 Score=118.24 Aligned_cols=125 Identities=16% Similarity=0.194 Sum_probs=80.5
Q ss_pred CceEEecCCC----CccccCCCCCCCCeEEEEeCCCCCCCCChHH--HHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhh
Q psy16575 4 TKTRINILKS----NSLKYAGWDPHKRNVIIIHGFNQSESQSPMT--IIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLS 77 (247)
Q Consensus 4 ~g~~i~~~~~----~~l~~s~~~~~~~~vv~iHG~~~~~~~~~~~--~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~ 77 (247)
.+++..++.. -.+...... +.|+||++|||..+... |.. .....+++ .+|+|+++|+++++.+........
T Consensus 6 ~~~~~~~~~~~~~~~~~~y~~~g-~~~~ivllHG~~~~~~~-~~~~~~~~~~l~~-~~~~vi~~D~~G~G~S~~~~~~~~ 82 (282)
T TIGR03343 6 TSKFVKINEKGLSNFRIHYNEAG-NGEAVIMLHGGGPGAGG-WSNYYRNIGPFVD-AGYRVILKDSPGFNKSDAVVMDEQ 82 (282)
T ss_pred cceEEEcccccccceeEEEEecC-CCCeEEEECCCCCchhh-HHHHHHHHHHHHh-CCCEEEEECCCCCCCCCCCcCccc
Confidence 4556666532 223333333 45889999999876642 322 22222444 469999999999988742110011
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 78 NTRLVAQCAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 78 ~~~~v~~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
.....++.+.++++ ..+ .++++++||||||.++..++..+|+++.+++.++|+.
T Consensus 83 ~~~~~~~~l~~~l~---~l~--~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 136 (282)
T TIGR03343 83 RGLVNARAVKGLMD---ALD--IEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGG 136 (282)
T ss_pred ccchhHHHHHHHHH---HcC--CCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCC
Confidence 11122344444443 333 4799999999999999999999999999999999763
No 21
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.50 E-value=1.3e-13 Score=123.49 Aligned_cols=103 Identities=15% Similarity=0.214 Sum_probs=76.7
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEE
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIH 104 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~ 104 (247)
.|+|||+|||.++.. .|..+.. .|.+ +|+|+++|+++++.+..........+..++.+..+++.+ + .++++
T Consensus 88 gp~lvllHG~~~~~~--~w~~~~~-~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l---~--~~~~~ 158 (360)
T PLN02679 88 GPPVLLVHGFGASIP--HWRRNIG-VLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV---V--QKPTV 158 (360)
T ss_pred CCeEEEECCCCCCHH--HHHHHHH-HHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh---c--CCCeE
Confidence 489999999998874 3555555 5665 599999999999987421111234555666666665543 3 37999
Q ss_pred EEEechhhHHHhhhhh-hccCcccceeeecCCC
Q psy16575 105 CVGHSLGAHICGMMSN-HLTHRMHKIIGIDPAR 136 (247)
Q Consensus 105 liGhSlGg~va~~~a~-~~~~~v~~i~~LdPa~ 136 (247)
||||||||.++..++. ..|++|.+++.++|+.
T Consensus 159 lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~ 191 (360)
T PLN02679 159 LIGNSVGSLACVIAASESTRDLVRGLVLLNCAG 191 (360)
T ss_pred EEEECHHHHHHHHHHHhcChhhcCEEEEECCcc
Confidence 9999999999987765 5689999999999875
No 22
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.50 E-value=2.9e-13 Score=116.27 Aligned_cols=109 Identities=15% Similarity=0.185 Sum_probs=82.2
Q ss_pred CCeEEEEeCCCCCCCC--ChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCcc
Q psy16575 25 KRNVIIIHGFNQSESQ--SPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYD 102 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~--~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~ 102 (247)
+++||++|||.+.... ..+..+++ .|.+.||+|+++|+++++.+..... ........+++...++++.+.+ .++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~-~La~~Gy~Vl~~Dl~G~G~S~g~~~-~~~~~~~~~Dv~~ai~~L~~~~--~~~ 100 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQAR-AFAAGGFGVLQIDLYGCGDSAGDFA-AARWDVWKEDVAAAYRWLIEQG--HPP 100 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHH-HHHHCCCEEEEECCCCCCCCCCccc-cCCHHHHHHHHHHHHHHHHhcC--CCC
Confidence 5789999999875432 23445555 5566689999999999987742211 2244555677777777777665 379
Q ss_pred EEEEEechhhHHHhhhhhhccCcccceeeecCCCc
Q psy16575 103 IHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARP 137 (247)
Q Consensus 103 i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p 137 (247)
++|+||||||.++..++...++++.+++.++|...
T Consensus 101 v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 101 VTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred EEEEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 99999999999999998888999999999998754
No 23
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.49 E-value=2.7e-13 Score=117.69 Aligned_cols=103 Identities=15% Similarity=0.112 Sum_probs=75.0
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccE
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDI 103 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i 103 (247)
.+|++||+||+..+. ..+..+.. .|.+. |+|+++|+++++.+.............++.+.++++.+ + .+++
T Consensus 33 ~~~~iv~lHG~~~~~--~~~~~~~~-~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~ 103 (286)
T PRK03204 33 TGPPILLCHGNPTWS--FLYRDIIV-ALRDR-FRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHL---G--LDRY 103 (286)
T ss_pred CCCEEEEECCCCccH--HHHHHHHH-HHhCC-cEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHh---C--CCCE
Confidence 358999999987654 23556665 56654 99999999999876421111223455555555555443 3 4789
Q ss_pred EEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 104 HCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 104 ~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
+++||||||.||..++...|++|++++.++|.
T Consensus 104 ~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 135 (286)
T PRK03204 104 LSMGQDWGGPISMAVAVERADRVRGVVLGNTW 135 (286)
T ss_pred EEEEECccHHHHHHHHHhChhheeEEEEECcc
Confidence 99999999999999999999999999988764
No 24
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.49 E-value=2.4e-13 Score=115.73 Aligned_cols=104 Identities=16% Similarity=0.148 Sum_probs=77.2
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccE
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDI 103 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i 103 (247)
+.|+||++||+.++.. .+..+.+ .|.+ +|+|+++|+++++.+........+....++++.++++. .+ .+++
T Consensus 27 ~~~~vv~~hG~~~~~~--~~~~~~~-~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~---~~--~~~~ 97 (278)
T TIGR03056 27 AGPLLLLLHGTGASTH--SWRDLMP-PLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAA---EG--LSPD 97 (278)
T ss_pred CCCeEEEEcCCCCCHH--HHHHHHH-HHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHH---cC--CCCc
Confidence 4689999999988763 3556665 5565 49999999999987632111123455556666655543 33 3689
Q ss_pred EEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 104 HCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 104 ~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
+|+||||||.++..++...+.++.+++.+++..
T Consensus 98 ~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~ 130 (278)
T TIGR03056 98 GVIGHSAGAAIALRLALDGPVTPRMVVGINAAL 130 (278)
T ss_pred eEEEECccHHHHHHHHHhCCcccceEEEEcCcc
Confidence 999999999999999999999999999998753
No 25
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.47 E-value=3.7e-13 Score=111.18 Aligned_cols=103 Identities=15% Similarity=0.196 Sum_probs=72.9
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHH-HHcCCCCccE
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHL-THHGASAYDI 103 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l-~~~~~~~~~i 103 (247)
+|+||++||+.++.. .+..+.+ .|. .+|+|+++|+++++.+..... .....+.+.+.+++..+ ... +.+++
T Consensus 1 ~~~vv~~hG~~~~~~--~~~~~~~-~L~-~~~~v~~~d~~g~G~s~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~ 72 (251)
T TIGR03695 1 KPVLVFLHGFLGSGA--DWQALIE-LLG-PHFRCLAIDLPGHGSSQSPDE--IERYDFEEAAQDILATLLDQL--GIEPF 72 (251)
T ss_pred CCEEEEEcCCCCchh--hHHHHHH-Hhc-ccCeEEEEcCCCCCCCCCCCc--cChhhHHHHHHHHHHHHHHHc--CCCeE
Confidence 478999999988874 4667765 566 579999999999887632111 01122222333323322 233 34789
Q ss_pred EEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 104 HCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 104 ~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
+|+||||||.+|..++...|.++.+++.++|.
T Consensus 73 ~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~ 104 (251)
T TIGR03695 73 FLVGYSMGGRIALYYALQYPERVQGLILESGS 104 (251)
T ss_pred EEEEeccHHHHHHHHHHhCchheeeeEEecCC
Confidence 99999999999999999999999999988875
No 26
>PLN02578 hydrolase
Probab=99.46 E-value=4.6e-13 Score=119.68 Aligned_cols=104 Identities=16% Similarity=0.149 Sum_probs=78.5
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccE
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDI 103 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i 103 (247)
+.|+||++|||.++. ..|..+.. .|.+ +|+|+++|+++++.+.. ..........++++.++++.+ . .+++
T Consensus 85 ~g~~vvliHG~~~~~--~~w~~~~~-~l~~-~~~v~~~D~~G~G~S~~-~~~~~~~~~~a~~l~~~i~~~---~--~~~~ 154 (354)
T PLN02578 85 EGLPIVLIHGFGASA--FHWRYNIP-ELAK-KYKVYALDLLGFGWSDK-ALIEYDAMVWRDQVADFVKEV---V--KEPA 154 (354)
T ss_pred CCCeEEEECCCCCCH--HHHHHHHH-HHhc-CCEEEEECCCCCCCCCC-cccccCHHHHHHHHHHHHHHh---c--cCCe
Confidence 457899999998876 34555555 4555 49999999999987742 222234555556666666554 2 3789
Q ss_pred EEEEechhhHHHhhhhhhccCcccceeeecCCCc
Q psy16575 104 HCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARP 137 (247)
Q Consensus 104 ~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p 137 (247)
+++||||||.+|..++...|+++.+++.++|++.
T Consensus 155 ~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~ 188 (354)
T PLN02578 155 VLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQ 188 (354)
T ss_pred EEEEECHHHHHHHHHHHhChHhcceEEEECCCcc
Confidence 9999999999999999999999999999998754
No 27
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.46 E-value=2.6e-13 Score=112.49 Aligned_cols=103 Identities=14% Similarity=0.112 Sum_probs=77.5
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccE
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDI 103 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i 103 (247)
.+|++|++||+..+.. .+..+.+ .|.+ +|+|+++|+++++.+.. ...........+++.++++.+ +.+++
T Consensus 12 ~~~~li~~hg~~~~~~--~~~~~~~-~l~~-~~~v~~~d~~G~G~s~~-~~~~~~~~~~~~~~~~~i~~~-----~~~~v 81 (251)
T TIGR02427 12 GAPVLVFINSLGTDLR--MWDPVLP-ALTP-DFRVLRYDKRGHGLSDA-PEGPYSIEDLADDVLALLDHL-----GIERA 81 (251)
T ss_pred CCCeEEEEcCcccchh--hHHHHHH-Hhhc-ccEEEEecCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHh-----CCCce
Confidence 5789999999987763 4556665 5664 69999999999987632 122234555566666655543 34789
Q ss_pred EEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 104 HCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 104 ~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
+++||||||.++..++...|+++.+++.++|+.
T Consensus 82 ~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 114 (251)
T TIGR02427 82 VFCGLSLGGLIAQGLAARRPDRVRALVLSNTAA 114 (251)
T ss_pred EEEEeCchHHHHHHHHHHCHHHhHHHhhccCcc
Confidence 999999999999999988889999999988764
No 28
>KOG4409|consensus
Probab=99.44 E-value=3.7e-13 Score=116.94 Aligned_cols=122 Identities=18% Similarity=0.249 Sum_probs=81.6
Q ss_pred eEEecCCCCccccCCC---CCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHH
Q psy16575 6 TRINILKSNSLKYAGW---DPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLV 82 (247)
Q Consensus 6 ~~i~~~~~~~l~~s~~---~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v 82 (247)
..+.+.+...++...+ +..++++|+|||++.... -|...+-. + .+ ..+|+++|+.+.+++....-......
T Consensus 68 ~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g-~f~~Nf~~-L-a~-~~~vyaiDllG~G~SSRP~F~~d~~~-- 141 (365)
T KOG4409|consen 68 KYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLG-LFFRNFDD-L-AK-IRNVYAIDLLGFGRSSRPKFSIDPTT-- 141 (365)
T ss_pred eeeecCCCceeEEEeecccccCCCcEEEEeccchhHH-HHHHhhhh-h-hh-cCceEEecccCCCCCCCCCCCCCccc--
Confidence 3444444444443333 245789999999988764 25555443 3 44 59999999999887631111111111
Q ss_pred HHHHHHHHHHH----HHcCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCCc
Q psy16575 83 AQCAAQFYSHL----THHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARP 137 (247)
Q Consensus 83 ~~~l~~~i~~l----~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p 137 (247)
...+|++.+ .+.++ +++.|+|||+||.+|..+|..+|++|.+++.+||++-
T Consensus 142 --~e~~fvesiE~WR~~~~L--~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf 196 (365)
T KOG4409|consen 142 --AEKEFVESIEQWRKKMGL--EKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGF 196 (365)
T ss_pred --chHHHHHHHHHHHHHcCC--cceeEeeccchHHHHHHHHHhChHhhceEEEeccccc
Confidence 111444443 34454 8999999999999999999999999999999999974
No 29
>PLN02511 hydrolase
Probab=99.44 E-value=6.9e-13 Score=120.04 Aligned_cols=109 Identities=13% Similarity=0.117 Sum_probs=75.6
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCcc
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYD 102 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~ 102 (247)
.++|+||++|||.++....|+..+...+++ .||+|+++|+|+++.++.... ........+++..+++.+... .+..+
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~-~g~~vv~~d~rG~G~s~~~~~-~~~~~~~~~Dl~~~i~~l~~~-~~~~~ 174 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARS-KGWRVVVFNSRGCADSPVTTP-QFYSASFTGDLRQVVDHVAGR-YPSAN 174 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHH-CCCEEEEEecCCCCCCCCCCc-CEEcCCchHHHHHHHHHHHHH-CCCCC
Confidence 467899999999887755566666654444 579999999999987742111 111123345677777776542 23368
Q ss_pred EEEEEechhhHHHhhhhhhccCc--ccceeeecC
Q psy16575 103 IHCVGHSLGAHICGMMSNHLTHR--MHKIIGIDP 134 (247)
Q Consensus 103 i~liGhSlGg~va~~~a~~~~~~--v~~i~~LdP 134 (247)
+++|||||||.++..++...+++ |.+.+.+.+
T Consensus 175 ~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~ 208 (388)
T PLN02511 175 LYAAGWSLGANILVNYLGEEGENCPLSGAVSLCN 208 (388)
T ss_pred EEEEEechhHHHHHHHHHhcCCCCCceEEEEECC
Confidence 99999999999998877777765 666666643
No 30
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.44 E-value=9.5e-13 Score=119.68 Aligned_cols=109 Identities=15% Similarity=0.186 Sum_probs=74.6
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHH-HHHHHHHHHHcCCCCc
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQC-AAQFYSHLTHHGASAY 101 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~-l~~~i~~l~~~~~~~~ 101 (247)
..+|+||++|||..+.. .+..... .|.+. |+|+++||++++.+..............+. +..+.+++...+. +
T Consensus 103 ~~~p~vvllHG~~~~~~--~~~~~~~-~L~~~-~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~--~ 176 (402)
T PLN02894 103 EDAPTLVMVHGYGASQG--FFFRNFD-ALASR-FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNL--S 176 (402)
T ss_pred CCCCEEEEECCCCcchh--HHHHHHH-HHHhC-CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCC--C
Confidence 35689999999987663 3334444 45554 999999999998763221111122222222 2233333444444 6
Q ss_pred cEEEEEechhhHHHhhhhhhccCcccceeeecCCCc
Q psy16575 102 DIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARP 137 (247)
Q Consensus 102 ~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p 137 (247)
+++|+||||||.+|..++...|+++.+++.++|++.
T Consensus 177 ~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~ 212 (402)
T PLN02894 177 NFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGF 212 (402)
T ss_pred CeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccc
Confidence 899999999999999999999999999999998753
No 31
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.43 E-value=8.1e-13 Score=121.97 Aligned_cols=105 Identities=21% Similarity=0.294 Sum_probs=73.3
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHH--hcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHH-HHHHHHHHcCCCCc
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYI--RRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAA-QFYSHLTHHGASAY 101 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l--~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~-~~i~~l~~~~~~~~ 101 (247)
+|+|||+|||.++... |...+...+. .+.+|+|+++|+++++.++.........+...+.+. .+ +...++ +
T Consensus 201 k~~VVLlHG~~~s~~~-W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~l---l~~lg~--~ 274 (481)
T PLN03087 201 KEDVLFIHGFISSSAF-WTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSV---LERYKV--K 274 (481)
T ss_pred CCeEEEECCCCccHHH-HHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHH---HHHcCC--C
Confidence 5799999999988742 4333333222 135799999999999877422111223444444442 23 334444 7
Q ss_pred cEEEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 102 DIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 102 ~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
+++|+||||||.+|..++..+|++|.+++.++|+
T Consensus 275 k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~ 308 (481)
T PLN03087 275 SFHIVAHSLGCILALALAVKHPGAVKSLTLLAPP 308 (481)
T ss_pred CEEEEEECHHHHHHHHHHHhChHhccEEEEECCC
Confidence 9999999999999999999999999999999874
No 32
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.43 E-value=1.3e-12 Score=117.86 Aligned_cols=105 Identities=11% Similarity=0.144 Sum_probs=80.2
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHH---HhhcHHHHHHHHHHHHHHHHHcCCCC
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLS---SLSNTRLVAQCAAQFYSHLTHHGASA 100 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~---~~~~~~~v~~~l~~~i~~l~~~~~~~ 100 (247)
.+|+|||||||..+.. .|..++. .|.+ +|+|+++|+++++.+..... ........++++..+++.+ + .
T Consensus 126 ~~~~ivllHG~~~~~~--~w~~~~~-~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l---~--~ 196 (383)
T PLN03084 126 NNPPVLLIHGFPSQAY--SYRKVLP-VLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL---K--S 196 (383)
T ss_pred CCCeEEEECCCCCCHH--HHHHHHH-HHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHh---C--C
Confidence 4689999999988774 3566665 5565 59999999999987642111 1235566666666666554 3 3
Q ss_pred ccEEEEEechhhHHHhhhhhhccCcccceeeecCCCc
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARP 137 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p 137 (247)
++++|+|||+||.++..++...|++|.+++.++|+.+
T Consensus 197 ~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~ 233 (383)
T PLN03084 197 DKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLT 233 (383)
T ss_pred CCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCc
Confidence 7899999999999999999999999999999998743
No 33
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.41 E-value=7.2e-13 Score=109.57 Aligned_cols=97 Identities=10% Similarity=0.243 Sum_probs=70.7
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEE
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIH 104 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~ 104 (247)
+|+||++|||.++.. .+..+.+ .|.+ +|+|+++|+++++.+... ...+...+.+.+ .+.. .++++
T Consensus 4 ~~~iv~~HG~~~~~~--~~~~~~~-~l~~-~~~vi~~d~~G~G~s~~~--~~~~~~~~~~~~-------~~~~--~~~~~ 68 (245)
T TIGR01738 4 NVHLVLIHGWGMNAE--VFRCLDE-ELSA-HFTLHLVDLPGHGRSRGF--GPLSLADAAEAI-------AAQA--PDPAI 68 (245)
T ss_pred CceEEEEcCCCCchh--hHHHHHH-hhcc-CeEEEEecCCcCccCCCC--CCcCHHHHHHHH-------HHhC--CCCeE
Confidence 479999999988774 4566665 5555 599999999999876421 112233222222 2211 26899
Q ss_pred EEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 105 CVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 105 liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
++||||||.++..++...|+++.+++.+++..
T Consensus 69 lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 100 (245)
T TIGR01738 69 WLGWSLGGLVALHIAATHPDRVRALVTVASSP 100 (245)
T ss_pred EEEEcHHHHHHHHHHHHCHHhhheeeEecCCc
Confidence 99999999999999999999999999998763
No 34
>PRK10985 putative hydrolase; Provisional
Probab=99.41 E-value=1.9e-12 Score=114.40 Aligned_cols=110 Identities=15% Similarity=0.217 Sum_probs=72.0
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCcc
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYD 102 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~ 102 (247)
+.+|+||++||+.++....+...+++ .|.+.||+|+++|+|+++.++.......... ...++..+++.+.+. .+.++
T Consensus 56 ~~~p~vll~HG~~g~~~~~~~~~~~~-~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~-~~~D~~~~i~~l~~~-~~~~~ 132 (324)
T PRK10985 56 RHKPRLVLFHGLEGSFNSPYAHGLLE-AAQKRGWLGVVMHFRGCSGEPNRLHRIYHSG-ETEDARFFLRWLQRE-FGHVP 132 (324)
T ss_pred CCCCEEEEeCCCCCCCcCHHHHHHHH-HHHHCCCEEEEEeCCCCCCCccCCcceECCC-chHHHHHHHHHHHHh-CCCCC
Confidence 35789999999998765546666776 5566789999999999876532111111111 124556666665542 13368
Q ss_pred EEEEEechhhHHHhhhhhhcc-C-cccceeeecCC
Q psy16575 103 IHCVGHSLGAHICGMMSNHLT-H-RMHKIIGIDPA 135 (247)
Q Consensus 103 i~liGhSlGg~va~~~a~~~~-~-~v~~i~~LdPa 135 (247)
++++||||||.++..++...+ + ++.+++.+.|.
T Consensus 133 ~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p 167 (324)
T PRK10985 133 TAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAP 167 (324)
T ss_pred EEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCC
Confidence 999999999987654444433 3 37788878764
No 35
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.41 E-value=1.7e-12 Score=113.46 Aligned_cols=124 Identities=19% Similarity=0.342 Sum_probs=87.7
Q ss_pred CCCCccccCCCCCC---CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCC-ChHHHhhcHHHHHHHH
Q psy16575 11 LKSNSLKYAGWDPH---KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFP-CYLSSLSNTRLVAQCA 86 (247)
Q Consensus 11 ~~~~~l~~s~~~~~---~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~-~y~~~~~~~~~v~~~l 86 (247)
.+...+..-.|... +.+||++||..++.. -+..+++ .|...||.|+++|||+++.+. ............-.++
T Consensus 17 ~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~--ry~~la~-~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl 93 (298)
T COG2267 17 ADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSG--RYEELAD-DLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDL 93 (298)
T ss_pred CCCceEEEEeecCCCCCCcEEEEecCchHHHH--HHHHHHH-HHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHH
Confidence 33444444444332 268999999999884 4777887 555668999999999999884 2222222244445555
Q ss_pred HHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCCcc
Q psy16575 87 AQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARPL 138 (247)
Q Consensus 87 ~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p~ 138 (247)
..+++.+... ....+++|+||||||.||..++...+.++.+++...|+..+
T Consensus 94 ~~~~~~~~~~-~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l 144 (298)
T COG2267 94 DAFVETIAEP-DPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGL 144 (298)
T ss_pred HHHHHHHhcc-CCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccC
Confidence 6666555432 23479999999999999999999988899999998887544
No 36
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.40 E-value=2.3e-12 Score=114.92 Aligned_cols=104 Identities=19% Similarity=0.240 Sum_probs=77.4
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCcc
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYD 102 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~ 102 (247)
.+.+++|++|||.++.. .+..+.. .|.+. |+|+++|+++++.+.. .....+...+.+.+..+++. . +.++
T Consensus 129 ~~~~~vl~~HG~~~~~~--~~~~~~~-~l~~~-~~v~~~d~~g~G~s~~-~~~~~~~~~~~~~~~~~~~~---~--~~~~ 198 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLN--NWLFNHA-ALAAG-RPVIALDLPGHGASSK-AVGAGSLDELAAAVLAFLDA---L--GIER 198 (371)
T ss_pred CCCCeEEEECCCCCccc--hHHHHHH-HHhcC-CEEEEEcCCCCCCCCC-CCCCCCHHHHHHHHHHHHHh---c--CCcc
Confidence 34689999999998874 3555555 56654 9999999999987631 11233455555555555443 3 3478
Q ss_pred EEEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 103 IHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 103 i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
++|+||||||.+|..++...+.++.+++.++|..
T Consensus 199 ~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~ 232 (371)
T PRK14875 199 AHLVGHSMGGAVALRLAARAPQRVASLTLIAPAG 232 (371)
T ss_pred EEEEeechHHHHHHHHHHhCchheeEEEEECcCC
Confidence 9999999999999999988898999999998763
No 37
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.39 E-value=3.7e-12 Score=104.20 Aligned_cols=110 Identities=19% Similarity=0.321 Sum_probs=89.2
Q ss_pred CCCCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCC
Q psy16575 20 GWDPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGAS 99 (247)
Q Consensus 20 ~~~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~ 99 (247)
.|...+..|++||||+++.. -.+.|.+ +|++.||.|.++.|++++..+ -.-.....+.+-+++.+-.+.|.+.+.
T Consensus 10 ~f~~G~~AVLllHGFTGt~~--Dvr~Lgr-~L~e~GyTv~aP~ypGHG~~~-e~fl~t~~~DW~~~v~d~Y~~L~~~gy- 84 (243)
T COG1647 10 TFEGGNRAVLLLHGFTGTPR--DVRMLGR-YLNENGYTVYAPRYPGHGTLP-EDFLKTTPRDWWEDVEDGYRDLKEAGY- 84 (243)
T ss_pred eeccCCEEEEEEeccCCCcH--HHHHHHH-HHHHCCceEecCCCCCCCCCH-HHHhcCCHHHHHHHHHHHHHHHHHcCC-
Confidence 45566789999999999995 4788886 889889999999999999774 122333556777777777778887776
Q ss_pred CccEEEEEechhhHHHhhhhhhccCcccceeeecCCCc
Q psy16575 100 AYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARP 137 (247)
Q Consensus 100 ~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p 137 (247)
+.|.++|.||||.+|+.+|..+| +++|+.+.++.-
T Consensus 85 -~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~ 119 (243)
T COG1647 85 -DEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVN 119 (243)
T ss_pred -CeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcc
Confidence 79999999999999999999998 788998876643
No 38
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.38 E-value=3.5e-12 Score=115.60 Aligned_cols=109 Identities=16% Similarity=0.242 Sum_probs=78.3
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccE
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDI 103 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i 103 (247)
.+++||++|||.++. ..+..+++ .|.+.||+|+++||++++.+..............+++..+++.+... .+..++
T Consensus 135 ~~~~Vl~lHG~~~~~--~~~~~~a~-~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~-~~~~~i 210 (395)
T PLN02652 135 MRGILIIIHGLNEHS--GRYLHFAK-QLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSE-NPGVPC 210 (395)
T ss_pred CceEEEEECCchHHH--HHHHHHHH-HHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHh-CCCCCE
Confidence 457999999998876 34667776 55556899999999999877421111224455667777788776532 122479
Q ss_pred EEEEechhhHHHhhhhhhc--cCcccceeeecCCC
Q psy16575 104 HCVGHSLGAHICGMMSNHL--THRMHKIIGIDPAR 136 (247)
Q Consensus 104 ~liGhSlGg~va~~~a~~~--~~~v~~i~~LdPa~ 136 (247)
+|+||||||.++..++.+- +.++..++...|+.
T Consensus 211 ~lvGhSmGG~ial~~a~~p~~~~~v~glVL~sP~l 245 (395)
T PLN02652 211 FLFGHSTGGAVVLKAASYPSIEDKLEGIVLTSPAL 245 (395)
T ss_pred EEEEECHHHHHHHHHHhccCcccccceEEEECccc
Confidence 9999999999998877531 24788999888864
No 39
>PRK06489 hypothetical protein; Provisional
Probab=99.37 E-value=2.1e-12 Score=115.57 Aligned_cols=105 Identities=12% Similarity=0.171 Sum_probs=71.0
Q ss_pred CCeEEEEeCCCCCCCCChH-HHHHHHHH------hcCCcEEEEEcCCCCCCCCChHHH------hhcHHHHHHHHHHHHH
Q psy16575 25 KRNVIIIHGFNQSESQSPM-TIIRDAYI------RRRDYNVFMLDFADLAPFPCYLSS------LSNTRLVAQCAAQFYS 91 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~-~~l~~~~l------~~~~~~Vi~vD~~~~~~~~~y~~~------~~~~~~v~~~l~~~i~ 91 (247)
.|+|||+|||.++... |+ ..+.+.+. ...+|+||++|+++++.+...... ..+.....+++ +.
T Consensus 69 gpplvllHG~~~~~~~-~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~---~~ 144 (360)
T PRK06489 69 DNAVLVLHGTGGSGKS-FLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQ---YR 144 (360)
T ss_pred CCeEEEeCCCCCchhh-hccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHH---HH
Confidence 6899999999987643 43 23433221 124699999999999877321110 12333333333 33
Q ss_pred HH-HHcCCCCccEE-EEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 92 HL-THHGASAYDIH-CVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 92 ~l-~~~~~~~~~i~-liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
.+ .+.++ ++++ |+||||||.||..++..+|++|.+++.++++
T Consensus 145 ~l~~~lgi--~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~ 188 (360)
T PRK06489 145 LVTEGLGV--KHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQ 188 (360)
T ss_pred HHHHhcCC--CceeEEEEECHHHHHHHHHHHhCchhhheeeeeccC
Confidence 22 33444 6776 8999999999999999999999999998865
No 40
>KOG4178|consensus
Probab=99.36 E-value=5.9e-12 Score=108.89 Aligned_cols=109 Identities=19% Similarity=0.196 Sum_probs=83.3
Q ss_pred CCCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHH-HhhcHHHHHHHHHHHHHHHHHcCCC
Q psy16575 21 WDPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLS-SLSNTRLVAQCAAQFYSHLTHHGAS 99 (247)
Q Consensus 21 ~~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~-~~~~~~~v~~~l~~~i~~l~~~~~~ 99 (247)
...+.|+++++|||..+..+ |..++. .|+..+|+|+++|.|+++.+..... ....+..+..++..+++.| +
T Consensus 40 g~~~gP~illlHGfPe~wys-wr~q~~--~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~L---g-- 111 (322)
T KOG4178|consen 40 GPGDGPIVLLLHGFPESWYS-WRHQIP--GLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHL---G-- 111 (322)
T ss_pred cCCCCCEEEEEccCCccchh-hhhhhh--hhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHh---c--
Confidence 45578999999999998864 544443 4555569999999999987632222 3445666666666666655 3
Q ss_pred CccEEEEEechhhHHHhhhhhhccCcccceeeecCCCc
Q psy16575 100 AYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARP 137 (247)
Q Consensus 100 ~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p 137 (247)
.++++|+||++||.||..++..+|++|.+++.+.-..+
T Consensus 112 ~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 112 LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP 149 (322)
T ss_pred cceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC
Confidence 58999999999999999999999999999998864443
No 41
>KOG1455|consensus
Probab=99.36 E-value=9.3e-12 Score=106.39 Aligned_cols=113 Identities=12% Similarity=0.226 Sum_probs=85.7
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHH-cCCCCccE
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTH-HGASAYDI 103 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~-~~~~~~~i 103 (247)
+-.|+++||+++.... .++.++. .|...||.|+++||.+++.+..-.....+...+.+++..+++.+.. ....-...
T Consensus 54 r~lv~~~HG~g~~~s~-~~~~~a~-~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~ 131 (313)
T KOG1455|consen 54 RGLVFLCHGYGEHSSW-RYQSTAK-RLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPR 131 (313)
T ss_pred ceEEEEEcCCcccchh-hHHHHHH-HHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCe
Confidence 4589999999988743 3555665 5666789999999999998854444555677777777777776432 22334579
Q ss_pred EEEEechhhHHHhhhhhhccCcccceeeecCCCccc
Q psy16575 104 HCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARPLV 139 (247)
Q Consensus 104 ~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p~f 139 (247)
.|.||||||.|+..++.+-|....+++++.|.-+.-
T Consensus 132 FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~ 167 (313)
T KOG1455|consen 132 FLFGESMGGAVALLIALKDPNFWDGAILVAPMCKIS 167 (313)
T ss_pred eeeecCcchHHHHHHHhhCCcccccceeeecccccC
Confidence 999999999999999998888888888888875543
No 42
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.34 E-value=7.5e-12 Score=109.52 Aligned_cols=122 Identities=13% Similarity=0.129 Sum_probs=80.5
Q ss_pred eEEecCCCCccccCCCC-CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChH-HHhhcHHHHH
Q psy16575 6 TRINILKSNSLKYAGWD-PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYL-SSLSNTRLVA 83 (247)
Q Consensus 6 ~~i~~~~~~~l~~s~~~-~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~-~~~~~~~~v~ 83 (247)
+.+...+...+...... ++.++||++||+.++... . .+.. ++...+|+|+++|+++++.+..-. ........+.
T Consensus 7 ~~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~--~-~~~~-~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 82 (306)
T TIGR01249 7 GYLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTD--P-GCRR-FFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLV 82 (306)
T ss_pred CeEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCC--H-HHHh-ccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHH
Confidence 35555554444433332 346789999998777632 2 2332 444456999999999998773111 0112344445
Q ss_pred HHHHHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 84 QCAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 84 ~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
+++..+++. .+ .++++++||||||.++..++...|+++.+++.+++..
T Consensus 83 ~dl~~l~~~---l~--~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 83 ADIEKLREK---LG--IKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred HHHHHHHHH---cC--CCCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 555544443 33 4789999999999999999999999999999888653
No 43
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.33 E-value=2.9e-12 Score=113.97 Aligned_cols=104 Identities=14% Similarity=0.113 Sum_probs=70.4
Q ss_pred CCeEEEEeCCCCCCCC----------ChHHHHHHH--HHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHH
Q psy16575 25 KRNVIIIHGFNQSESQ----------SPMTIIRDA--YIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSH 92 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~----------~~~~~l~~~--~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~ 92 (247)
.+++||+||+.++... .||..+... .|...+|+||++|+++++.+.. ........++++..+++.
T Consensus 57 ~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~---~~~~~~~~a~dl~~ll~~ 133 (343)
T PRK08775 57 GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD---VPIDTADQADAIALLLDA 133 (343)
T ss_pred CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC---CCCCHHHHHHHHHHHHHH
Confidence 3457777776655431 155555531 2322359999999999876531 122344455555555544
Q ss_pred HHHcCCCCcc-EEEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 93 LTHHGASAYD-IHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 93 l~~~~~~~~~-i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
.++ ++ ++||||||||.||..++..+|++|.+++.++++.
T Consensus 134 ---l~l--~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~ 173 (343)
T PRK08775 134 ---LGI--ARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAH 173 (343)
T ss_pred ---cCC--CcceEEEEECHHHHHHHHHHHHChHhhheEEEECccc
Confidence 444 45 5799999999999999999999999999999863
No 44
>PLN00021 chlorophyllase
Probab=99.32 E-value=1.7e-11 Score=107.77 Aligned_cols=108 Identities=17% Similarity=0.159 Sum_probs=71.6
Q ss_pred CCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHH-----c
Q psy16575 22 DPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTH-----H 96 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~-----~ 96 (247)
....|+||++|||..+. .++..+.+ .|.+.||.|+++|+++.+.. .... ......+.+.++.+.+.. .
T Consensus 49 ~g~~PvVv~lHG~~~~~--~~y~~l~~-~Las~G~~VvapD~~g~~~~-~~~~---~i~d~~~~~~~l~~~l~~~l~~~~ 121 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYN--SFYSQLLQ-HIASHGFIVVAPQLYTLAGP-DGTD---EIKDAAAVINWLSSGLAAVLPEGV 121 (313)
T ss_pred CCCCCEEEEECCCCCCc--ccHHHHHH-HHHhCCCEEEEecCCCcCCC-Cchh---hHHHHHHHHHHHHhhhhhhccccc
Confidence 34568999999998876 45777776 55666899999998875432 1111 122222222222221211 2
Q ss_pred CCCCccEEEEEechhhHHHhhhhhhcc-----CcccceeeecCCC
Q psy16575 97 GASAYDIHCVGHSLGAHICGMMSNHLT-----HRMHKIIGIDPAR 136 (247)
Q Consensus 97 ~~~~~~i~liGhSlGg~va~~~a~~~~-----~~v~~i~~LdPa~ 136 (247)
..+.++++|+||||||.+|..++...+ .++..++++||..
T Consensus 122 ~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 122 RPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred ccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 345689999999999999988887765 3688999999964
No 45
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.31 E-value=1.2e-11 Score=95.44 Aligned_cols=93 Identities=17% Similarity=0.351 Sum_probs=69.1
Q ss_pred eEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEEE
Q psy16575 27 NVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHCV 106 (247)
Q Consensus 27 ~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~li 106 (247)
+||++||+.++. ..+..+.+.+ .+.||+|+.+|+++.+.+. .. ..+.++++.+.+...+.+++.|+
T Consensus 1 ~vv~~HG~~~~~--~~~~~~~~~l-~~~G~~v~~~~~~~~~~~~----~~-------~~~~~~~~~~~~~~~~~~~i~l~ 66 (145)
T PF12695_consen 1 VVVLLHGWGGSR--RDYQPLAEAL-AEQGYAVVAFDYPGHGDSD----GA-------DAVERVLADIRAGYPDPDRIILI 66 (145)
T ss_dssp EEEEECTTTTTT--HHHHHHHHHH-HHTTEEEEEESCTTSTTSH----HS-------HHHHHHHHHHHHHHCTCCEEEEE
T ss_pred CEEEECCCCCCH--HHHHHHHHHH-HHCCCEEEEEecCCCCccc----hh-------HHHHHHHHHHHhhcCCCCcEEEE
Confidence 689999999876 3467777744 4458999999999887651 11 13444444432211266899999
Q ss_pred EechhhHHHhhhhhhccCcccceeeecC
Q psy16575 107 GHSLGAHICGMMSNHLTHRMHKIIGIDP 134 (247)
Q Consensus 107 GhSlGg~va~~~a~~~~~~v~~i~~LdP 134 (247)
|||+||.++..++... .+++.++.+.|
T Consensus 67 G~S~Gg~~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 67 GHSMGGAIAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp EETHHHHHHHHHHHHS-TTESEEEEESE
T ss_pred EEccCcHHHHHHhhhc-cceeEEEEecC
Confidence 9999999999988876 77999999998
No 46
>PRK10566 esterase; Provisional
Probab=99.30 E-value=2.5e-11 Score=102.57 Aligned_cols=99 Identities=13% Similarity=0.041 Sum_probs=67.1
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCC-ChHHHh-----hcHHHHHHHHHHHHHHHHHc
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFP-CYLSSL-----SNTRLVAQCAAQFYSHLTHH 96 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~-~y~~~~-----~~~~~v~~~l~~~i~~l~~~ 96 (247)
...|+||++||+.++.. .+..+++ .|.+.||+|+++|+++++.+. ...... .......+++..+++++.+.
T Consensus 25 ~~~p~vv~~HG~~~~~~--~~~~~~~-~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 101 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKL--VYSYFAV-ALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREE 101 (249)
T ss_pred CCCCEEEEeCCCCcccc--hHHHHHH-HHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 34689999999988763 4556665 566668999999999876431 000000 01112234455566666554
Q ss_pred C-CCCccEEEEEechhhHHHhhhhhhccC
Q psy16575 97 G-ASAYDIHCVGHSLGAHICGMMSNHLTH 124 (247)
Q Consensus 97 ~-~~~~~i~liGhSlGg~va~~~a~~~~~ 124 (247)
+ ++.+++.++||||||.++..++...+.
T Consensus 102 ~~~~~~~i~v~G~S~Gg~~al~~~~~~~~ 130 (249)
T PRK10566 102 GWLLDDRLAVGGASMGGMTALGIMARHPW 130 (249)
T ss_pred CCcCccceeEEeecccHHHHHHHHHhCCC
Confidence 3 677899999999999999988877665
No 47
>PRK13604 luxD acyl transferase; Provisional
Probab=99.29 E-value=2.3e-11 Score=105.86 Aligned_cols=107 Identities=14% Similarity=0.176 Sum_probs=76.7
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCC-CCCCC-hHHHhhcHHHHHHHHHHHHHHHHHcCCCC
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADL-APFPC-YLSSLSNTRLVAQCAAQFYSHLTHHGASA 100 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~-~~~~~-y~~~~~~~~~v~~~l~~~i~~l~~~~~~~ 100 (247)
...+++|+.||+++.. ..+..+++ +|.+.||+|+.+|++++ +.+.. +... .+..-..++...++++++.+ .
T Consensus 35 ~~~~~vIi~HGf~~~~--~~~~~~A~-~La~~G~~vLrfD~rg~~GeS~G~~~~~--t~s~g~~Dl~aaid~lk~~~--~ 107 (307)
T PRK13604 35 KKNNTILIASGFARRM--DHFAGLAE-YLSSNGFHVIRYDSLHHVGLSSGTIDEF--TMSIGKNSLLTVVDWLNTRG--I 107 (307)
T ss_pred CCCCEEEEeCCCCCCh--HHHHHHHH-HHHHCCCEEEEecCCCCCCCCCCccccC--cccccHHHHHHHHHHHHhcC--C
Confidence 3458999999999976 34777776 77788999999999875 65532 2111 11112357777788887654 3
Q ss_pred ccEEEEEechhhHHHhhhhhhccCcccceeeecCCCcc
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARPL 138 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p~ 138 (247)
++|.|+||||||.+|..+|... +++.++...|...+
T Consensus 108 ~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l 143 (307)
T PRK13604 108 NNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNL 143 (307)
T ss_pred CceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccH
Confidence 7899999999999997776643 47788888887663
No 48
>PRK11071 esterase YqiA; Provisional
Probab=99.26 E-value=3.7e-11 Score=98.38 Aligned_cols=91 Identities=19% Similarity=0.322 Sum_probs=63.5
Q ss_pred CeEEEEeCCCCCCCCChHHHHHHHHHhc--CCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccE
Q psy16575 26 RNVIIIHGFNQSESQSPMTIIRDAYIRR--RDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDI 103 (247)
Q Consensus 26 ~~vv~iHG~~~~~~~~~~~~l~~~~l~~--~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i 103 (247)
|+||++|||.++... |.......++.+ .+++|+++|+++++ ....+.+.++++ +.+ .+++
T Consensus 2 p~illlHGf~ss~~~-~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~---~~~--~~~~ 63 (190)
T PRK11071 2 STLLYLHGFNSSPRS-AKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVL---EHG--GDPL 63 (190)
T ss_pred CeEEEECCCCCCcch-HHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHH---HcC--CCCe
Confidence 689999999999864 433222336654 36999999999752 123334444433 333 3689
Q ss_pred EEEEechhhHHHhhhhhhccCcccceeeecCCCc
Q psy16575 104 HCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARP 137 (247)
Q Consensus 104 ~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p 137 (247)
+++||||||.+|..++...+. +++.++|+..
T Consensus 64 ~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~ 94 (190)
T PRK11071 64 GLVGSSLGGYYATWLSQCFML---PAVVVNPAVR 94 (190)
T ss_pred EEEEECHHHHHHHHHHHHcCC---CEEEECCCCC
Confidence 999999999999999988873 4577888643
No 49
>KOG2564|consensus
Probab=99.26 E-value=4.2e-11 Score=101.17 Aligned_cols=108 Identities=17% Similarity=0.181 Sum_probs=81.4
Q ss_pred CCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCc
Q psy16575 22 DPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAY 101 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~ 101 (247)
.+..|.+++.||.+.+.- .+..+++++..+-..+|+++|.|+++.+..-.......+...+++..+++.+- +-.+.
T Consensus 71 ~t~gpil~l~HG~G~S~L--SfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~f--ge~~~ 146 (343)
T KOG2564|consen 71 ATEGPILLLLHGGGSSAL--SFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELF--GELPP 146 (343)
T ss_pred CCCccEEEEeecCcccch--hHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHh--ccCCC
Confidence 345789999999888874 36777877888777899999999999874334444566777777777777653 33457
Q ss_pred cEEEEEechhhHHHhhhhhh--ccCcccceeeecC
Q psy16575 102 DIHCVGHSLGAHICGMMSNH--LTHRMHKIIGIDP 134 (247)
Q Consensus 102 ~i~liGhSlGg~va~~~a~~--~~~~v~~i~~LdP 134 (247)
+|.||||||||.||.+.+.. +|. +..|+.+|-
T Consensus 147 ~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDV 180 (343)
T KOG2564|consen 147 QIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDV 180 (343)
T ss_pred ceEEEeccccchhhhhhhhhhhchh-hhceEEEEE
Confidence 89999999999999776643 455 777777774
No 50
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.25 E-value=1.3e-11 Score=110.14 Aligned_cols=108 Identities=15% Similarity=0.129 Sum_probs=74.3
Q ss_pred CCCeEEEEeCCCCCCCCC---------hHHHHHH--HHHhcCCcEEEEEcCCC--CCCCCC---------hH--HHhhcH
Q psy16575 24 HKRNVIIIHGFNQSESQS---------PMTIIRD--AYIRRRDYNVFMLDFAD--LAPFPC---------YL--SSLSNT 79 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~---------~~~~l~~--~~l~~~~~~Vi~vD~~~--~~~~~~---------y~--~~~~~~ 79 (247)
.+++||++||+.++.... ||..+.. ..+...+|.|+++|+++ ++.+.. |. ......
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~ 109 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITI 109 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcH
Confidence 357999999999976321 5555531 12333569999999999 443310 00 001334
Q ss_pred HHHHHHHHHHHHHHHHcCCCCcc-EEEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 80 RLVAQCAAQFYSHLTHHGASAYD-IHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 80 ~~v~~~l~~~i~~l~~~~~~~~~-i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
+..++.+..+++ +.++ ++ ++|+||||||.++..++..+|++|.+++.+++..
T Consensus 110 ~~~~~~~~~~~~---~l~~--~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 110 RDDVKAQKLLLD---HLGI--EQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSA 162 (351)
T ss_pred HHHHHHHHHHHH---HcCC--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCC
Confidence 555555555554 4454 67 9999999999999999999999999999999763
No 51
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.25 E-value=4.4e-11 Score=103.55 Aligned_cols=114 Identities=18% Similarity=0.155 Sum_probs=79.6
Q ss_pred CCCceEEecCCCCccccCCCCCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHH
Q psy16575 2 HGTKTRINILKSNSLKYAGWDPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRL 81 (247)
Q Consensus 2 ~~~g~~i~~~~~~~l~~s~~~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~ 81 (247)
++||-.+.....+. .-++.+|++|++||+.++..+.+.+.+..++ .+.||.|++++||+++..++-.... ...-
T Consensus 56 ~pdg~~~~ldw~~~----p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~-~~rg~~~Vv~~~Rgcs~~~n~~p~~-yh~G 129 (345)
T COG0429 56 TPDGGFIDLDWSED----PRAAKKPLVVLFHGLEGSSNSPYARGLMRAL-SRRGWLVVVFHFRGCSGEANTSPRL-YHSG 129 (345)
T ss_pred cCCCCEEEEeeccC----ccccCCceEEEEeccCCCCcCHHHHHHHHHH-HhcCCeEEEEecccccCCcccCcce-eccc
Confidence 44555444443332 2245678999999999999888888888754 4556999999999998765311111 1111
Q ss_pred HHHHHHHHHHHHHHcCCCCccEEEEEechhh-HHHhhhhhhc
Q psy16575 82 VAQCAAQFYSHLTHHGASAYDIHCVGHSLGA-HICGMMSNHL 122 (247)
Q Consensus 82 v~~~l~~~i~~l~~~~~~~~~i~liGhSlGg-~va~~~a~~~ 122 (247)
...+++.+++++.+.. ...++..+|+|||| +++.+.++.-
T Consensus 130 ~t~D~~~~l~~l~~~~-~~r~~~avG~SLGgnmLa~ylgeeg 170 (345)
T COG0429 130 ETEDIRFFLDWLKARF-PPRPLYAVGFSLGGNMLANYLGEEG 170 (345)
T ss_pred chhHHHHHHHHHHHhC-CCCceEEEEecccHHHHHHHHHhhc
Confidence 2257788888877644 45899999999999 8888888764
No 52
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.24 E-value=1.5e-10 Score=99.92 Aligned_cols=107 Identities=12% Similarity=0.115 Sum_probs=75.4
Q ss_pred CCCeEEEEeCCCCCCCC--ChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCc
Q psy16575 24 HKRNVIIIHGFNQSESQ--SPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAY 101 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~--~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~ 101 (247)
+++.+|++||+.+.... ..+..+++ .|.+.||+|+++|+++++.+.... ........++...++.+.+.....+
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~-~l~~~G~~v~~~Dl~G~G~S~~~~---~~~~~~~~d~~~~~~~l~~~~~g~~ 100 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLAR-RLAEAGFPVLRFDYRGMGDSEGEN---LGFEGIDADIAAAIDAFREAAPHLR 100 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHH-HHHHCCCEEEEeCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHHhhCCCCC
Confidence 45688889987654321 12345565 566668999999999999874321 2344556677777777754311236
Q ss_pred cEEEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 102 DIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 102 ~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
+++++||||||.++..++.. +.+|.+++.++|.
T Consensus 101 ~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~ 133 (274)
T TIGR03100 101 RIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPW 133 (274)
T ss_pred cEEEEEECHHHHHHHHHhhh-CCCccEEEEECCc
Confidence 89999999999999888754 4679999999875
No 53
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.21 E-value=9.9e-11 Score=106.83 Aligned_cols=108 Identities=13% Similarity=0.236 Sum_probs=73.9
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHc-CCCCc
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHH-GASAY 101 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~-~~~~~ 101 (247)
...|+||+.||+.+... ..+..+++ +|.+.||+|+++|+++.+.+.... ...+... ....+++++... .++.+
T Consensus 192 ~~~P~Vli~gG~~~~~~-~~~~~~~~-~La~~Gy~vl~~D~pG~G~s~~~~-~~~d~~~---~~~avld~l~~~~~vd~~ 265 (414)
T PRK05077 192 GPFPTVLVCGGLDSLQT-DYYRLFRD-YLAPRGIAMLTIDMPSVGFSSKWK-LTQDSSL---LHQAVLNALPNVPWVDHT 265 (414)
T ss_pred CCccEEEEeCCcccchh-hhHHHHHH-HHHhCCCEEEEECCCCCCCCCCCC-ccccHHH---HHHHHHHHHHhCcccCcc
Confidence 34567776666655433 23445555 566678999999999988763221 1112222 224456666543 45778
Q ss_pred cEEEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 102 DIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 102 ~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
+|.++||||||.+|..++...+.+|+.++.++|..
T Consensus 266 ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~ 300 (414)
T PRK05077 266 RVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVV 300 (414)
T ss_pred cEEEEEEChHHHHHHHHHHhCCcCceEEEEECCcc
Confidence 99999999999999999988888999999998764
No 54
>KOG1454|consensus
Probab=99.21 E-value=4.5e-11 Score=105.68 Aligned_cols=104 Identities=15% Similarity=0.177 Sum_probs=71.6
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHh-hcHHHHHHHHHHHHHHHHHcCCCCc
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSL-SNTRLVAQCAAQFYSHLTHHGASAY 101 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~-~~~~~v~~~l~~~i~~l~~~~~~~~ 101 (247)
.++++||++|||.++.. .|..+...+.+..|+.|.++|..|++.+....... ..... .+..+.+...+.+. +
T Consensus 56 ~~~~pvlllHGF~~~~~--~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~---~v~~i~~~~~~~~~--~ 128 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSF--SWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRE---LVELIRRFVKEVFV--E 128 (326)
T ss_pred CCCCcEEEeccccCCcc--cHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhH---HHHHHHHHHHhhcC--c
Confidence 46899999999999663 35555553444456999999999977321222211 22222 22222233344433 6
Q ss_pred cEEEEEechhhHHHhhhhhhccCcccceeeec
Q psy16575 102 DIHCVGHSLGAHICGMMSNHLTHRMHKIIGID 133 (247)
Q Consensus 102 ~i~liGhSlGg~va~~~a~~~~~~v~~i~~Ld 133 (247)
+++|+||||||.+|..+|..+|+.|+.++++|
T Consensus 129 ~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~ 160 (326)
T KOG1454|consen 129 PVSLVGHSLGGIVALKAAAYYPETVDSLVLLD 160 (326)
T ss_pred ceEEEEeCcHHHHHHHHHHhCcccccceeeec
Confidence 79999999999999999999999999999776
No 55
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.20 E-value=1.1e-10 Score=103.56 Aligned_cols=111 Identities=13% Similarity=0.187 Sum_probs=73.1
Q ss_pred CCCeEEEEeCCCCCCCCChH------------------------HHHHHHHHhcCCcEEEEEcCCCCCCCCChH---HHh
Q psy16575 24 HKRNVIIIHGFNQSESQSPM------------------------TIIRDAYIRRRDYNVFMLDFADLAPFPCYL---SSL 76 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~------------------------~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~---~~~ 76 (247)
.+.+|+++||+.++....++ ..+++ .|.+.||.|+++|+++++.+.... ...
T Consensus 20 ~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~-~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~ 98 (332)
T TIGR01607 20 AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIE-NFNKNGYSVYGLDLQGHGESDGLQNLRGHI 98 (332)
T ss_pred CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHH-HHHHCCCcEEEecccccCCCccccccccch
Confidence 45799999999988752221 24565 556668999999999998764221 111
Q ss_pred hcHHHHHHHHHHHHHHHHHc------------------CCC-CccEEEEEechhhHHHhhhhhhccC--------cccce
Q psy16575 77 SNTRLVAQCAAQFYSHLTHH------------------GAS-AYDIHCVGHSLGAHICGMMSNHLTH--------RMHKI 129 (247)
Q Consensus 77 ~~~~~v~~~l~~~i~~l~~~------------------~~~-~~~i~liGhSlGg~va~~~a~~~~~--------~v~~i 129 (247)
.....+.+++..+++.+.+. ..+ ..+++|+||||||.|+..++..++. .+..+
T Consensus 99 ~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~ 178 (332)
T TIGR01607 99 NCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGC 178 (332)
T ss_pred hhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccccccceE
Confidence 24455556666666654331 111 2479999999999999887765432 46677
Q ss_pred eeecCC
Q psy16575 130 IGIDPA 135 (247)
Q Consensus 130 ~~LdPa 135 (247)
+.+.|+
T Consensus 179 i~~s~~ 184 (332)
T TIGR01607 179 ISLSGM 184 (332)
T ss_pred EEeccc
Confidence 766665
No 56
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=99.19 E-value=1.7e-10 Score=97.36 Aligned_cols=113 Identities=19% Similarity=0.296 Sum_probs=83.9
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHH--HHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCC
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRD--AYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASA 100 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~--~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~ 100 (247)
+.+..+||||||..+..+ .....++ ..+... ..++.+.|++.+....|..........+..++++|..|.+. ...
T Consensus 16 ~~~~vlvfVHGyn~~f~~-a~~r~aql~~~~~~~-~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~-~~~ 92 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFED-ALRRAAQLAHDLGFP-GVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARA-PGI 92 (233)
T ss_pred CCCeEEEEEeCCCCCHHH-HHHHHHHHHHHhCCC-ceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhc-cCC
Confidence 567899999999988753 2233322 123323 38999999998876678887778888889999999988765 123
Q ss_pred ccEEEEEechhhHHHhhhhhhcc---------CcccceeeecCCCcc
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHLT---------HRMHKIIGIDPARPL 138 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~~---------~~v~~i~~LdPa~p~ 138 (247)
++||||+||||+.+...+.+.+. .++..|+.+.|.-+.
T Consensus 93 ~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 93 KRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred ceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 89999999999999987766532 257788888877654
No 57
>PRK07581 hypothetical protein; Validated
Probab=99.17 E-value=6.1e-11 Score=105.08 Aligned_cols=107 Identities=9% Similarity=0.037 Sum_probs=67.8
Q ss_pred CeEEEEeCCCCCCCCChHHHHHH--HHHhcCCcEEEEEcCCCCCCCCChHHH--hhc-----HHHHHHHHHHHHHHH-HH
Q psy16575 26 RNVIIIHGFNQSESQSPMTIIRD--AYIRRRDYNVFMLDFADLAPFPCYLSS--LSN-----TRLVAQCAAQFYSHL-TH 95 (247)
Q Consensus 26 ~~vv~iHG~~~~~~~~~~~~l~~--~~l~~~~~~Vi~vD~~~~~~~~~y~~~--~~~-----~~~v~~~l~~~i~~l-~~ 95 (247)
|+||++||+.++.. ++..+.. ..|...+|+||++|+++++.+...... ... ...+++++..+...+ .+
T Consensus 42 ~~vll~~~~~~~~~--~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 119 (339)
T PRK07581 42 NAILYPTWYSGTHQ--DNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEK 119 (339)
T ss_pred CEEEEeCCCCCCcc--cchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHH
Confidence 45666666665543 2222211 134334699999999999876321110 011 112345555433333 34
Q ss_pred cCCCCcc-EEEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 96 HGASAYD-IHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 96 ~~~~~~~-i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
+++ ++ ++||||||||.||..++..+|++|.+++.++...
T Consensus 120 lgi--~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~ 159 (339)
T PRK07581 120 FGI--ERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTA 159 (339)
T ss_pred hCC--CceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCC
Confidence 565 78 5899999999999999999999999999997653
No 58
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.16 E-value=1.7e-10 Score=120.56 Aligned_cols=103 Identities=18% Similarity=0.217 Sum_probs=76.9
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChH-------HHhhcHHHHHHHHHHHHHHHHHc
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYL-------SSLSNTRLVAQCAAQFYSHLTHH 96 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~-------~~~~~~~~v~~~l~~~i~~l~~~ 96 (247)
.+++|||+|||.++.. .|..+.+ .|.+ +|+|+++|+++++.+..-. ......+.+++.+..+++.+
T Consensus 1370 ~~~~vVllHG~~~s~~--~w~~~~~-~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l--- 1442 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE--DWIPIMK-AISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI--- 1442 (1655)
T ss_pred CCCeEEEECCCCCCHH--HHHHHHH-HHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh---
Confidence 4689999999999985 3455665 4554 4999999999998763111 01224555566665555543
Q ss_pred CCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 97 GASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 97 ~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
+ .++++|+||||||.+|..++..+|++|.+++.+++.
T Consensus 1443 ~--~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~ 1479 (1655)
T PLN02980 1443 T--PGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGS 1479 (1655)
T ss_pred C--CCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCC
Confidence 3 479999999999999999999999999999999864
No 59
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.16 E-value=9.6e-11 Score=105.75 Aligned_cols=107 Identities=16% Similarity=0.135 Sum_probs=73.8
Q ss_pred CCeEEEEeCCCCCCCC-----------ChHHHHHH---HHHhcCCcEEEEEcCCCC-C-CC-CC---------hHH--Hh
Q psy16575 25 KRNVIIIHGFNQSESQ-----------SPMTIIRD---AYIRRRDYNVFMLDFADL-A-PF-PC---------YLS--SL 76 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~-----------~~~~~l~~---~~l~~~~~~Vi~vD~~~~-~-~~-~~---------y~~--~~ 76 (247)
+|+||++||+.++... .||..+.. +++. .+|+||++|.++. . .+ +. |.. ..
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~-~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~ 126 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDT-DRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPV 126 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCc-cceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCc
Confidence 6899999999998752 14555431 2334 4699999999872 2 21 10 000 02
Q ss_pred hcHHHHHHHHHHHHHHHHHcCCCCcc-EEEEEechhhHHHhhhhhhccCcccceeeecCCCc
Q psy16575 77 SNTRLVAQCAAQFYSHLTHHGASAYD-IHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARP 137 (247)
Q Consensus 77 ~~~~~v~~~l~~~i~~l~~~~~~~~~-i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p 137 (247)
.+....++.+..+++. .++ ++ ++|+||||||.++..++..+|++|.+++.++++.+
T Consensus 127 ~~~~~~~~~~~~~l~~---l~~--~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 183 (379)
T PRK00175 127 ITIRDWVRAQARLLDA---LGI--TRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSAR 183 (379)
T ss_pred CCHHHHHHHHHHHHHH---hCC--CCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcc
Confidence 3455555555555544 444 67 59999999999999999999999999999997653
No 60
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.14 E-value=3.5e-10 Score=100.91 Aligned_cols=105 Identities=8% Similarity=0.076 Sum_probs=73.1
Q ss_pred CCeEEEEeCCCCCCCC---ChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHH-HHHHHHHHHHHHH-cCCC
Q psy16575 25 KRNVIIIHGFNQSESQ---SPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLV-AQCAAQFYSHLTH-HGAS 99 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~---~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v-~~~l~~~i~~l~~-~~~~ 99 (247)
+++||++||+..+... .....+++ +|.+.||+|+++||++.+.+. ...+.... ...+...++.+.+ .+
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~-~L~~~G~~V~~~D~~g~g~s~----~~~~~~d~~~~~~~~~v~~l~~~~~-- 134 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVR-GLLERGQDVYLIDWGYPDRAD----RYLTLDDYINGYIDKCVDYICRTSK-- 134 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHH-HHHHCCCeEEEEeCCCCCHHH----hcCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 4579999997654321 11245665 566678999999999876432 11223333 3346666776543 33
Q ss_pred CccEEEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 100 AYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 100 ~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
.++++++||||||.++..++...++++.+++.+.|..
T Consensus 135 ~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~ 171 (350)
T TIGR01836 135 LDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPV 171 (350)
T ss_pred CCcccEEEECHHHHHHHHHHHhCchheeeEEEecccc
Confidence 3799999999999999988888888999999997653
No 61
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.14 E-value=3.7e-10 Score=88.98 Aligned_cols=106 Identities=27% Similarity=0.462 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhccC----cccceeeecCCCccccccCCcccccCcCCCCee
Q psy16575 82 VAQCAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLTH----RMHKIIGIDPARPLVDRYGDKAFRLTRDDANFV 157 (247)
Q Consensus 82 v~~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~----~v~~i~~LdPa~p~f~~~~~~~~rL~~~dA~~V 157 (247)
+...+...++..... .+..+|+++||||||++|..++..+.. ++.++++++|+.+....... .++...++.++
T Consensus 10 ~~~~i~~~~~~~~~~-~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~~~~--~~~~~~~~~~~ 86 (153)
T cd00741 10 LANLVLPLLKSALAQ-YPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAAFAE--DRLDPSDALFV 86 (153)
T ss_pred HHHHHHHHHHHHHHH-CCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchHHHH--HhhhccCCccE
Confidence 334444444443211 245799999999999999999988754 67889999999887543221 14667789999
Q ss_pred eEEEeCCCCCCCC------CcccceeeecCCCcCCCCCC
Q psy16575 158 QVIHTNAWFLGEA------PQVGHVDFCVNGGRMQPSCT 190 (247)
Q Consensus 158 ~viht~~~~~G~~------~~~g~~dfy~ngg~~qPgc~ 190 (247)
..||++.+.++.. ...+..+||.|++..++.|.
T Consensus 87 ~~i~~~~D~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (153)
T cd00741 87 DRIVNDNDIVPRLPPGGEGYPHGGAEFYINGGKSQPGCC 125 (153)
T ss_pred EEEEECCCccCCCCCCcCCCeecceEEEECCCCCCCccc
Confidence 9999998877654 46788999999998776664
No 62
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.14 E-value=1.9e-10 Score=95.84 Aligned_cols=92 Identities=21% Similarity=0.346 Sum_probs=55.8
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcE---EEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHH-HHcCCCC
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYN---VFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHL-THHGASA 100 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~---Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l-~~~~~~~ 100 (247)
+.+||||||..++....| ..+++ +|++.||. |++++|......+.........+. .++++.||+.. ...|.
T Consensus 1 ~~PVVlVHG~~~~~~~~w-~~~~~-~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~-~~~l~~fI~~Vl~~TGa-- 75 (219)
T PF01674_consen 1 NRPVVLVHGTGGNAYSNW-STLAP-YLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCES-AKQLRAFIDAVLAYTGA-- 75 (219)
T ss_dssp S--EEEE--TTTTTCGGC-CHHHH-HHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHH-HHHHHHHHHHHHHHHT---
T ss_pred CCCEEEECCCCcchhhCH-HHHHH-HHHHcCCCcceeEeccCCCCCCCCcccccccchhh-HHHHHHHHHHHHHhhCC--
Confidence 357999999888665434 45565 66667899 899999876543212222223333 37888899884 45663
Q ss_pred ccEEEEEechhhHHHhhhhhhc
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~ 122 (247)
+|.|||||||+.++.++.+..
T Consensus 76 -kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 76 -KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp --EEEEEETCHHHHHHHHHHHC
T ss_pred -EEEEEEcCCcCHHHHHHHHHc
Confidence 999999999999998888754
No 63
>PLN02872 triacylglycerol lipase
Probab=99.12 E-value=1.4e-10 Score=104.99 Aligned_cols=132 Identities=11% Similarity=-0.007 Sum_probs=82.6
Q ss_pred CCCceEEecCCCCccccCCCCCCCCeEEEEeCCCCCCCCCh-----HHHHHHHHHhcCCcEEEEEcCCCCCCCC---ChH
Q psy16575 2 HGTKTRINILKSNSLKYAGWDPHKRNVIIIHGFNQSESQSP-----MTIIRDAYIRRRDYNVFMLDFADLAPFP---CYL 73 (247)
Q Consensus 2 ~~~g~~i~~~~~~~l~~s~~~~~~~~vv~iHG~~~~~~~~~-----~~~l~~~~l~~~~~~Vi~vD~~~~~~~~---~y~ 73 (247)
|+||..|.+.--..-........+|+||++||+..+... | ...++. .|.+.||.|+++|+|+...+. .+.
T Consensus 51 T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~-w~~~~~~~sla~-~La~~GydV~l~n~RG~~~s~gh~~~~ 128 (395)
T PLN02872 51 TKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDA-WFLNSPEQSLGF-ILADHGFDVWVGNVRGTRWSYGHVTLS 128 (395)
T ss_pred CCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccc-eeecCcccchHH-HHHhCCCCcccccccccccccCCCCCC
Confidence 667776665332110000112346899999998776643 3 133443 466678999999999864220 010
Q ss_pred H---H--hhcHHHHH-HHHHHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhcc---CcccceeeecCCCcc
Q psy16575 74 S---S--LSNTRLVA-QCAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLT---HRMHKIIGIDPARPL 138 (247)
Q Consensus 74 ~---~--~~~~~~v~-~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~---~~v~~i~~LdPa~p~ 138 (247)
. . .......+ .++..+++++.+.. .+++++|||||||.++..++ ..| ++|..++++.|+..+
T Consensus 129 ~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~--~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~ 199 (395)
T PLN02872 129 EKDKEFWDWSWQELALYDLAEMIHYVYSIT--NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYL 199 (395)
T ss_pred ccchhccCCcHHHHHHHHHHHHHHHHHhcc--CCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhh
Confidence 0 0 12334455 68888888875432 37999999999999987554 344 368888899988643
No 64
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.12 E-value=3.9e-10 Score=93.63 Aligned_cols=112 Identities=10% Similarity=0.101 Sum_probs=74.8
Q ss_pred CCCCCeEEEEeCCCCCCCCChH--HHHHHHHHhcCCcEEEEEcCCCCCCCC-C---hHHHh-hcHHHHHHHHHHHHHHHH
Q psy16575 22 DPHKRNVIIIHGFNQSESQSPM--TIIRDAYIRRRDYNVFMLDFADLAPFP-C---YLSSL-SNTRLVAQCAAQFYSHLT 94 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~~~~~--~~l~~~~l~~~~~~Vi~vD~~~~~~~~-~---y~~~~-~~~~~v~~~l~~~i~~l~ 94 (247)
+...|+||++||+.++... +. ..+.. ++++.|+.|+++|+++.+... . +.... .........+.++++.+.
T Consensus 10 ~~~~P~vv~lHG~~~~~~~-~~~~~~~~~-~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 87 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASA-YVIDWGWKA-AADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVK 87 (212)
T ss_pred CCCCCEEEEeCCCCCCHHH-HhhhcChHH-HHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHH
Confidence 3457999999998877542 11 12333 566678999999998764221 0 00000 000112234556666654
Q ss_pred -HcCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 95 -HHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 95 -~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
+.+++.++++|+|||+||.++..++...++++..++.+...
T Consensus 88 ~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~ 129 (212)
T TIGR01840 88 ANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGL 129 (212)
T ss_pred HhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCC
Confidence 45677889999999999999999998889888888877644
No 65
>PRK05855 short chain dehydrogenase; Validated
Probab=99.10 E-value=5e-10 Score=105.55 Aligned_cols=91 Identities=12% Similarity=0.181 Sum_probs=64.1
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCCh-HHHhhcHHHHHHHHHHHHHHHHHcCCCCc
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCY-LSSLSNTRLVAQCAAQFYSHLTHHGASAY 101 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y-~~~~~~~~~v~~~l~~~i~~l~~~~~~~~ 101 (247)
++.|+|||+|||.++.. .|..+.+ +|.+ +|+|+++|+++++.+..- .......+...+++..+++.+ +. ..
T Consensus 23 ~~~~~ivllHG~~~~~~--~w~~~~~-~L~~-~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l---~~-~~ 94 (582)
T PRK05855 23 PDRPTVVLVHGYPDNHE--VWDGVAP-LLAD-RFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAV---SP-DR 94 (582)
T ss_pred CCCCeEEEEcCCCchHH--HHHHHHH-Hhhc-ceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHh---CC-CC
Confidence 35789999999988773 4566665 5554 699999999999877311 111234566666777766654 32 23
Q ss_pred cEEEEEechhhHHHhhhhhh
Q psy16575 102 DIHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 102 ~i~liGhSlGg~va~~~a~~ 121 (247)
+++|+||||||.++..++..
T Consensus 95 ~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 95 PVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred cEEEEecChHHHHHHHHHhC
Confidence 59999999999998766655
No 66
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.08 E-value=1.2e-09 Score=94.24 Aligned_cols=111 Identities=10% Similarity=0.105 Sum_probs=70.0
Q ss_pred CCCeEEEEeCCCCCCCCChHH-HHHHHHHhcCCcEEEEEcCC--CCCCCC------------ChHHHhh----cHHHHHH
Q psy16575 24 HKRNVIIIHGFNQSESQSPMT-IIRDAYIRRRDYNVFMLDFA--DLAPFP------------CYLSSLS----NTRLVAQ 84 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~-~l~~~~l~~~~~~Vi~vD~~--~~~~~~------------~y~~~~~----~~~~v~~ 84 (247)
..|+|+++||+.++... |.. .....++.+.|+.|+++|.. +.+.+. .|..... .......
T Consensus 41 ~~P~vvllHG~~~~~~~-~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~ 119 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHEN-FMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYS 119 (275)
T ss_pred CCCEEEEccCCCCCccH-HHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHH
Confidence 46899999999887753 321 11234666678999999984 222110 0110000 0001112
Q ss_pred HH-HHHHHHHHH-cCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 85 CA-AQFYSHLTH-HGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 85 ~l-~~~i~~l~~-~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
.+ .++...+.+ .+++.+++.++||||||++|..++...|+.+..++++.|.
T Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 120 YIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred HHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCc
Confidence 22 223333333 4567789999999999999999999999999888887766
No 67
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.06 E-value=1.7e-09 Score=90.79 Aligned_cols=108 Identities=16% Similarity=0.211 Sum_probs=67.7
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHH-----h--cCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHc
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYI-----R--RRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHH 96 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l-----~--~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~ 96 (247)
++.+||||||..++... ++.+..... . ...+.++++||........-..-..+.+.+.+.+..+++.+...
T Consensus 3 ~g~pVlFIhG~~Gs~~q--~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~ 80 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQ--VRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSN 80 (225)
T ss_pred CCCEEEEECcCCCCHhH--HHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhc
Confidence 56899999998887643 334443221 1 12488999998864322100111123444555555554444333
Q ss_pred CCCCccEEEEEechhhHHHhhhhhhcc---Ccccceeeec
Q psy16575 97 GASAYDIHCVGHSLGAHICGMMSNHLT---HRMHKIIGID 133 (247)
Q Consensus 97 ~~~~~~i~liGhSlGg~va~~~a~~~~---~~v~~i~~Ld 133 (247)
..+.++|.||||||||.+|..+..... .+|..|+.|.
T Consensus 81 ~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~ 120 (225)
T PF07819_consen 81 RPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLG 120 (225)
T ss_pred cCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEc
Confidence 456789999999999999987765543 5788999886
No 68
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.04 E-value=7.4e-10 Score=91.31 Aligned_cols=103 Identities=18% Similarity=0.241 Sum_probs=68.1
Q ss_pred EEEEeC--CCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEE
Q psy16575 28 VIIIHG--FNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHC 105 (247)
Q Consensus 28 vv~iHG--~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~l 105 (247)
||++|| |.... ......+...+.++.|+.|+.+|||-....+ ++. ..+++.+.+..+++...+.+.+.++|.|
T Consensus 1 v~~~HGGg~~~g~-~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~-~p~---~~~D~~~a~~~l~~~~~~~~~d~~~i~l 75 (211)
T PF07859_consen 1 VVYIHGGGWVMGS-KESHWPFAARLAAERGFVVVSIDYRLAPEAP-FPA---ALEDVKAAYRWLLKNADKLGIDPERIVL 75 (211)
T ss_dssp EEEE--STTTSCG-TTTHHHHHHHHHHHHTSEEEEEE---TTTSS-TTH---HHHHHHHHHHHHHHTHHHHTEEEEEEEE
T ss_pred CEEECCcccccCC-hHHHHHHHHHHHhhccEEEEEeecccccccc-ccc---cccccccceeeeccccccccccccceEE
Confidence 799999 33222 2344555555666568999999999876552 433 3445555666666665566788899999
Q ss_pred EEechhhHHHhhhhhhccC----cccceeeecCC
Q psy16575 106 VGHSLGAHICGMMSNHLTH----RMHKIIGIDPA 135 (247)
Q Consensus 106 iGhSlGg~va~~~a~~~~~----~v~~i~~LdPa 135 (247)
+|+|.||++|..++....+ +++.++.+.|.
T Consensus 76 ~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~ 109 (211)
T PF07859_consen 76 IGDSAGGHLALSLALRARDRGLPKPKGIILISPW 109 (211)
T ss_dssp EEETHHHHHHHHHHHHHHHTTTCHESEEEEESCH
T ss_pred eecccccchhhhhhhhhhhhcccchhhhhccccc
Confidence 9999999999888876543 36778888774
No 69
>PRK10162 acetyl esterase; Provisional
Probab=99.03 E-value=2.7e-09 Score=94.11 Aligned_cols=108 Identities=13% Similarity=0.103 Sum_probs=72.9
Q ss_pred CCCeEEEEeCCC---CCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCC
Q psy16575 24 HKRNVIIIHGFN---QSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASA 100 (247)
Q Consensus 24 ~~~~vv~iHG~~---~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~ 100 (247)
..|+||++||.. ++. ..+..+...+....|+.|+++|||.....+ |+.. ..++...+..+.+...+.+++.
T Consensus 80 ~~p~vv~~HGGg~~~g~~--~~~~~~~~~la~~~g~~Vv~vdYrlape~~-~p~~---~~D~~~a~~~l~~~~~~~~~d~ 153 (318)
T PRK10162 80 SQATLFYLHGGGFILGNL--DTHDRIMRLLASYSGCTVIGIDYTLSPEAR-FPQA---IEEIVAVCCYFHQHAEDYGINM 153 (318)
T ss_pred CCCEEEEEeCCcccCCCc--hhhhHHHHHHHHHcCCEEEEecCCCCCCCC-CCCc---HHHHHHHHHHHHHhHHHhCCCh
Confidence 468999999933 333 223445554555568999999999876542 4433 3444444444444455678888
Q ss_pred ccEEEEEechhhHHHhhhhhhcc------CcccceeeecCCCc
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHLT------HRMHKIIGIDPARP 137 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~~------~~v~~i~~LdPa~p 137 (247)
++|.|+|+|+||++|..++..+. .++..++.+.|...
T Consensus 154 ~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 154 SRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred hHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 99999999999999988876542 45777777776543
No 70
>PRK11460 putative hydrolase; Provisional
Probab=99.03 E-value=4e-09 Score=88.94 Aligned_cols=111 Identities=12% Similarity=0.153 Sum_probs=68.5
Q ss_pred CCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCC---CC---h-------HHHhhcHHHHHHHHHH
Q psy16575 22 DPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPF---PC---Y-------LSSLSNTRLVAQCAAQ 88 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~---~~---y-------~~~~~~~~~v~~~l~~ 88 (247)
.+.+|+||++||++++... +..+.+ .+.+..+++..++.++.... .. | ......+......+.+
T Consensus 13 ~~~~~~vIlLHG~G~~~~~--~~~l~~-~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~ 89 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVA--MGEIGS-WFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIE 89 (232)
T ss_pred CCCCcEEEEEeCCCCChHH--HHHHHH-HHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHH
Confidence 4567899999999999853 566666 45443344444443332100 00 1 0011112223334444
Q ss_pred HHHHHH-HcCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 89 FYSHLT-HHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 89 ~i~~l~-~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
+++.+. +.+++.++|+|+|||+||.++..++...++.++.++++.+.
T Consensus 90 ~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~ 137 (232)
T PRK11460 90 TVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGR 137 (232)
T ss_pred HHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccc
Confidence 555543 45777789999999999999998888888877878877543
No 71
>KOG2382|consensus
Probab=99.03 E-value=1e-09 Score=94.99 Aligned_cols=107 Identities=17% Similarity=0.239 Sum_probs=84.7
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccE
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDI 103 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i 103 (247)
..|+++++||+.++.. .|..+...+-++.+..|+++|-|.++.++ + ....+-..++.++..||+..... ....++
T Consensus 51 ~~Pp~i~lHGl~GS~~--Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp-~-~~~h~~~~ma~dv~~Fi~~v~~~-~~~~~~ 125 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKE--NWRSVAKNLSRKLGRDVYAVDVRNHGSSP-K-ITVHNYEAMAEDVKLFIDGVGGS-TRLDPV 125 (315)
T ss_pred CCCceEEecccccCCC--CHHHHHHHhcccccCceEEEecccCCCCc-c-ccccCHHHHHHHHHHHHHHcccc-cccCCc
Confidence 5799999999999984 46778877777788999999999999885 2 34455677888888888764321 123689
Q ss_pred EEEEechhh-HHHhhhhhhccCcccceeeecCC
Q psy16575 104 HCVGHSLGA-HICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 104 ~liGhSlGg-~va~~~a~~~~~~v~~i~~LdPa 135 (247)
.|+|||||| .+++..+...|..+.+++.+|-+
T Consensus 126 ~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~s 158 (315)
T KOG2382|consen 126 VLLGHSMGGVKVAMAETLKKPDLIERLIVEDIS 158 (315)
T ss_pred eecccCcchHHHHHHHHHhcCcccceeEEEecC
Confidence 999999999 77777777888889999988844
No 72
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.99 E-value=8.6e-09 Score=85.82 Aligned_cols=139 Identities=14% Similarity=0.129 Sum_probs=79.0
Q ss_pred CCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCC------CCC-----------CCChHHHhhcHHHHHH
Q psy16575 22 DPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFAD------LAP-----------FPCYLSSLSNTRLVAQ 84 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~------~~~-----------~~~y~~~~~~~~~v~~ 84 (247)
.+.+++||++||++++. ..+..+....+...+..++.++-+. .+. .+........+....+
T Consensus 11 ~~~~~lvi~LHG~G~~~--~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSE--DLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp ST-SEEEEEE--TTS-H--HHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCCceEEEEECCCCCCc--chhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 45678999999998887 3344433322334557777765221 011 0000012234555566
Q ss_pred HHHHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCCccccccCCcccccCcCCCCeeeEEEeCC
Q psy16575 85 CAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARPLVDRYGDKAFRLTRDDANFVQVIHTNA 164 (247)
Q Consensus 85 ~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p~f~~~~~~~~rL~~~dA~~V~viht~~ 164 (247)
.+.++|+...+.+++.++|+|.|+|+||.+|..++...+.+++.++++....|....... +.......-+=.+|...
T Consensus 89 ~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~~---~~~~~~~~pi~~~hG~~ 165 (216)
T PF02230_consen 89 RLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELED---RPEALAKTPILIIHGDE 165 (216)
T ss_dssp HHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCHC---CHCCCCTS-EEEEEETT
T ss_pred HHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccccc---cccccCCCcEEEEecCC
Confidence 777788776667789999999999999999999999999999999999876665332111 11222233455667555
Q ss_pred C
Q psy16575 165 W 165 (247)
Q Consensus 165 ~ 165 (247)
+
T Consensus 166 D 166 (216)
T PF02230_consen 166 D 166 (216)
T ss_dssp -
T ss_pred C
Confidence 4
No 73
>PLN02442 S-formylglutathione hydrolase
Probab=98.98 E-value=3.1e-09 Score=92.25 Aligned_cols=110 Identities=12% Similarity=0.102 Sum_probs=69.9
Q ss_pred CCCCeEEEEeCCCCCCCCChH--HHHHHHHHhcCCcEEEEEcCCCCC-----CC---------CChHHHh-------hcH
Q psy16575 23 PHKRNVIIIHGFNQSESQSPM--TIIRDAYIRRRDYNVFMLDFADLA-----PF---------PCYLSSL-------SNT 79 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~--~~l~~~~l~~~~~~Vi~vD~~~~~-----~~---------~~y~~~~-------~~~ 79 (247)
...|+|+++||+.++... |. ..+. .++...++.|+++|....+ .. ..|.... ...
T Consensus 45 ~~~Pvv~~lHG~~~~~~~-~~~~~~~~-~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (283)
T PLN02442 45 GKVPVLYWLSGLTCTDEN-FIQKSGAQ-RAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMY 122 (283)
T ss_pred CCCCEEEEecCCCcChHH-HHHhhhHH-HHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchh
Confidence 356999999999887742 32 2222 3666778999999975432 00 0010000 011
Q ss_pred HHHHHHHHHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 80 RLVAQCAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 80 ~~v~~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
..+.+.+..+++.... .++.++++|+||||||++|..++...|+++..++.+.|.
T Consensus 123 ~~~~~~l~~~i~~~~~-~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 177 (283)
T PLN02442 123 DYVVKELPKLLSDNFD-QLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPI 177 (283)
T ss_pred hhHHHHHHHHHHHHHH-hcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCc
Confidence 2233333333333211 246689999999999999999999999999988888776
No 74
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.96 E-value=2.7e-09 Score=87.84 Aligned_cols=75 Identities=20% Similarity=0.246 Sum_probs=58.1
Q ss_pred cEEEEEcCCCCCCCCC---hHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhccCcccceeee
Q psy16575 56 YNVFMLDFADLAPFPC---YLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGI 132 (247)
Q Consensus 56 ~~Vi~vD~~~~~~~~~---y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~L 132 (247)
|.|+++|||+.+.+.. ..........+.+.+..+++. .+. +++++|||||||.++..++..+|++|++|+.+
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~--~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~ 75 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREA---LGI--KKINLVGHSMGGMLALEYAAQYPERVKKLVLI 75 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHH---HTT--SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHH---hCC--CCeEEEEECCChHHHHHHHHHCchhhcCcEEE
Confidence 6899999999987743 233334455555555555544 344 67999999999999999999999999999988
Q ss_pred cCC
Q psy16575 133 DPA 135 (247)
Q Consensus 133 dPa 135 (247)
.++
T Consensus 76 ~~~ 78 (230)
T PF00561_consen 76 SPP 78 (230)
T ss_dssp SES
T ss_pred eee
Confidence 875
No 75
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.96 E-value=5.2e-09 Score=88.89 Aligned_cols=108 Identities=18% Similarity=0.190 Sum_probs=74.6
Q ss_pred CCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHc-----
Q psy16575 22 DPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHH----- 96 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~----- 96 (247)
..+-|++||+||+.-.. .|+..+.+ .++..||-|+.+|+...... .....++...+.+.++.+.|...
T Consensus 14 ~g~yPVv~f~~G~~~~~--s~Ys~ll~-hvAShGyIVV~~d~~~~~~~----~~~~~~~~~~~vi~Wl~~~L~~~l~~~v 86 (259)
T PF12740_consen 14 AGTYPVVLFLHGFLLIN--SWYSQLLE-HVASHGYIVVAPDLYSIGGP----DDTDEVASAAEVIDWLAKGLESKLPLGV 86 (259)
T ss_pred CCCcCEEEEeCCcCCCH--HHHHHHHH-HHHhCceEEEEecccccCCC----CcchhHHHHHHHHHHHHhcchhhccccc
Confidence 44569999999998443 57888887 55667899999996653322 12223333334444433334321
Q ss_pred CCCCccEEEEEechhhHHHhhhhhhc-----cCcccceeeecCCC
Q psy16575 97 GASAYDIHCVGHSLGAHICGMMSNHL-----THRMHKIIGIDPAR 136 (247)
Q Consensus 97 ~~~~~~i~liGhSlGg~va~~~a~~~-----~~~v~~i~~LdPa~ 136 (247)
..+.+++.|.|||-||.+|..++... ..+++.+++|||.-
T Consensus 87 ~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 87 KPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred cccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 24678999999999999997777665 45799999999975
No 76
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=98.95 E-value=2.8e-09 Score=100.70 Aligned_cols=114 Identities=9% Similarity=-0.025 Sum_probs=80.1
Q ss_pred CCCCeEEEEeCCCCCCC--CChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCC
Q psy16575 23 PHKRNVIIIHGFNQSES--QSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASA 100 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~--~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~ 100 (247)
...|+||++|||..+.. ..+...... ++.+.||.|+++|+|+.+.+..... ... ....+++.++++++.+.....
T Consensus 20 ~~~P~Il~~~gyg~~~~~~~~~~~~~~~-~l~~~Gy~vv~~D~RG~g~S~g~~~-~~~-~~~~~D~~~~i~~l~~q~~~~ 96 (550)
T TIGR00976 20 GPVPVILSRTPYGKDAGLRWGLDKTEPA-WFVAQGYAVVIQDTRGRGASEGEFD-LLG-SDEAADGYDLVDWIAKQPWCD 96 (550)
T ss_pred CCCCEEEEecCCCCchhhccccccccHH-HHHhCCcEEEEEeccccccCCCceE-ecC-cccchHHHHHHHHHHhCCCCC
Confidence 35789999999987642 112222233 5555689999999999887642111 111 345667888888887654444
Q ss_pred ccEEEEEechhhHHHhhhhhhccCcccceeeecCCCccc
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARPLV 139 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p~f 139 (247)
.+|.++|||+||.++..++...+.+++.|+...+...++
T Consensus 97 ~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 97 GNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLY 135 (550)
T ss_pred CcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchh
Confidence 799999999999999999988888888888776665433
No 77
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.93 E-value=9.7e-09 Score=84.13 Aligned_cols=103 Identities=20% Similarity=0.237 Sum_probs=69.6
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcC-CcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccE
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRR-DYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDI 103 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~-~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i 103 (247)
.|+++++||+.++... |.. ....+.... .|+|+++|+++++.+. .. ..........+..++ ...+. +++
T Consensus 21 ~~~i~~~hg~~~~~~~-~~~-~~~~~~~~~~~~~~~~~d~~g~g~s~--~~-~~~~~~~~~~~~~~~---~~~~~--~~~ 90 (282)
T COG0596 21 GPPLVLLHGFPGSSSV-WRP-VFKVLPALAARYRVIAPDLRGHGRSD--PA-GYSLSAYADDLAALL---DALGL--EKV 90 (282)
T ss_pred CCeEEEeCCCCCchhh-hHH-HHHHhhccccceEEEEecccCCCCCC--cc-cccHHHHHHHHHHHH---HHhCC--Cce
Confidence 5699999999988753 333 111122221 1999999999888773 00 111222233344443 34444 569
Q ss_pred EEEEechhhHHHhhhhhhccCcccceeeecCCCc
Q psy16575 104 HCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARP 137 (247)
Q Consensus 104 ~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p 137 (247)
+++|||+||.++..++...|.++.+++.+++..+
T Consensus 91 ~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 91 VLVGHSMGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred EEEEecccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 9999999999999999999999999999997654
No 78
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.85 E-value=1.6e-08 Score=97.72 Aligned_cols=94 Identities=15% Similarity=0.106 Sum_probs=64.2
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCC-C---------------hH------HHhhcHHHH
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFP-C---------------YL------SSLSNTRLV 82 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~-~---------------y~------~~~~~~~~v 82 (247)
.|+||++||++++.. .+..+++ .|.+.||.|+++|+++++.+. . |. .++.+.++.
T Consensus 449 ~P~VVllHG~~g~~~--~~~~lA~-~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~ 525 (792)
T TIGR03502 449 WPVVIYQHGITGAKE--NALAFAG-TLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQS 525 (792)
T ss_pred CcEEEEeCCCCCCHH--HHHHHHH-HHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHH
Confidence 479999999999884 4667776 555567999999999988662 1 10 012244555
Q ss_pred HHHHHHHHHHHH------Hc-----CCCCccEEEEEechhhHHHhhhhhh
Q psy16575 83 AQCAAQFYSHLT------HH-----GASAYDIHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 83 ~~~l~~~i~~l~------~~-----~~~~~~i~liGhSlGg~va~~~a~~ 121 (247)
..++..+...+. +. ..+..+++++||||||.++..++..
T Consensus 526 v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 526 ILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 555555555454 11 1445799999999999999777654
No 79
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.85 E-value=2.4e-08 Score=93.50 Aligned_cols=106 Identities=11% Similarity=0.215 Sum_probs=68.5
Q ss_pred CCCeEEEEeCCCCCCCC---ChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHH-HcCCC
Q psy16575 24 HKRNVIIIHGFNQSESQ---SPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLT-HHGAS 99 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~---~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~-~~~~~ 99 (247)
.+++|||||||.....- .--..+++ +|.+.||.|+++||++.+.+..... ....+...+...++.+. ..+
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~-~L~~qGf~V~~iDwrgpg~s~~~~~---~ddY~~~~i~~al~~v~~~~g-- 260 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVR-WLVEQGHTVFVISWRNPDASQADKT---FDDYIRDGVIAALEVVEAITG-- 260 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHH-HHHHCCcEEEEEECCCCCcccccCC---hhhhHHHHHHHHHHHHHHhcC--
Confidence 46899999998766531 00135665 6666689999999998775421111 11233344555555544 344
Q ss_pred CccEEEEEechhhHHHh-----hhhhhccCcccceeeecCC
Q psy16575 100 AYDIHCVGHSLGAHICG-----MMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 100 ~~~i~liGhSlGg~va~-----~~a~~~~~~v~~i~~LdPa 135 (247)
.++++++||||||.++. +++...+++|++++.+...
T Consensus 261 ~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~ 301 (532)
T TIGR01838 261 EKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTL 301 (532)
T ss_pred CCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecC
Confidence 47999999999999852 3333346789999988754
No 80
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.83 E-value=3.7e-08 Score=83.93 Aligned_cols=103 Identities=17% Similarity=0.255 Sum_probs=82.3
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEE
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIH 104 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~ 104 (247)
..|||-+||-.++..+ +..+++ .|...|.++|.++|++.+.++.|.....+...-...+..+++.| ++. +++.
T Consensus 35 ~gTVv~~hGsPGSH~D--FkYi~~-~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l---~i~-~~~i 107 (297)
T PF06342_consen 35 LGTVVAFHGSPGSHND--FKYIRP-PLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDEL---GIK-GKLI 107 (297)
T ss_pred ceeEEEecCCCCCccc--hhhhhh-HHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHc---CCC-CceE
Confidence 4589999999999965 778886 77777899999999999988777766666666666777666554 554 7899
Q ss_pred EEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 105 CVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 105 liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
++|||.|+-.|..++..+| +..++.+.|.+
T Consensus 108 ~~gHSrGcenal~la~~~~--~~g~~lin~~G 137 (297)
T PF06342_consen 108 FLGHSRGCENALQLAVTHP--LHGLVLINPPG 137 (297)
T ss_pred EEEeccchHHHHHHHhcCc--cceEEEecCCc
Confidence 9999999999988888774 55778887765
No 81
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.83 E-value=4.2e-08 Score=86.11 Aligned_cols=108 Identities=12% Similarity=0.102 Sum_probs=75.5
Q ss_pred CCCCeEEEEeC--CCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCC
Q psy16575 23 PHKRNVIIIHG--FNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASA 100 (247)
Q Consensus 23 ~~~~~vv~iHG--~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~ 100 (247)
...|+||++|| |..... .....+...++...|+.|+++|||..... .|+.. +.++.+.+..+.+...+.+.++
T Consensus 77 ~~~p~vly~HGGg~~~g~~-~~~~~~~~~~~~~~g~~vv~vdYrlaPe~-~~p~~---~~d~~~a~~~l~~~~~~~g~dp 151 (312)
T COG0657 77 ATAPVVLYLHGGGWVLGSL-RTHDALVARLAAAAGAVVVSVDYRLAPEH-PFPAA---LEDAYAAYRWLRANAAELGIDP 151 (312)
T ss_pred CCCcEEEEEeCCeeeecCh-hhhHHHHHHHHHHcCCEEEecCCCCCCCC-CCCch---HHHHHHHHHHHHhhhHhhCCCc
Confidence 35799999999 333332 23334444577778899999999988766 25443 3445555566666666788899
Q ss_pred ccEEEEEechhhHHHhhhhhhccC----cccceeeecCC
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHLTH----RMHKIIGIDPA 135 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~~~----~v~~i~~LdPa 135 (247)
++|.+.|+|.||++|..++....+ .....+.+.|.
T Consensus 152 ~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~ 190 (312)
T COG0657 152 SRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPL 190 (312)
T ss_pred cceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecc
Confidence 999999999999999888877653 23445555554
No 82
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.79 E-value=3.7e-08 Score=86.39 Aligned_cols=112 Identities=14% Similarity=0.224 Sum_probs=83.5
Q ss_pred CCCCCCeEEEEeCCCCCCCCChHHHHHHHHH--hcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCC
Q psy16575 21 WDPHKRNVIIIHGFNQSESQSPMTIIRDAYI--RRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGA 98 (247)
Q Consensus 21 ~~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l--~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~ 98 (247)
|...+..+||||||..+.....+ ..++ .. .......+.+-|++.+....|.........-...++.+|..|.+..
T Consensus 112 ~s~~k~vlvFvHGfNntf~dav~-R~aq-I~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~- 188 (377)
T COG4782 112 FSSAKTVLVFVHGFNNTFEDAVY-RTAQ-IVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDK- 188 (377)
T ss_pred ccCCCeEEEEEcccCCchhHHHH-HHHH-HHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCC-
Confidence 34667899999999988765333 2222 22 2234778899999998877888777788888899999999987654
Q ss_pred CCccEEEEEechhhHHHhhhhhhc--------cCcccceeeecCC
Q psy16575 99 SAYDIHCVGHSLGAHICGMMSNHL--------THRMHKIIGIDPA 135 (247)
Q Consensus 99 ~~~~i~liGhSlGg~va~~~a~~~--------~~~v~~i~~LdPa 135 (247)
+.++|+|++||||..++..+.+++ +.+++.++.-.|-
T Consensus 189 ~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPD 233 (377)
T COG4782 189 PVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPD 233 (377)
T ss_pred CCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCC
Confidence 248999999999999999888775 3456666655444
No 83
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.78 E-value=8.3e-08 Score=79.95 Aligned_cols=104 Identities=14% Similarity=0.153 Sum_probs=72.4
Q ss_pred CeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEE
Q psy16575 26 RNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHC 105 (247)
Q Consensus 26 ~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~l 105 (247)
++++++|+..++. ..+..+++ .+....+.|+.+++++..... ....+++.++.... +.+.+.. +..++.|
T Consensus 1 ~~lf~~p~~gG~~--~~y~~la~-~l~~~~~~v~~i~~~~~~~~~---~~~~si~~la~~y~---~~I~~~~-~~gp~~L 70 (229)
T PF00975_consen 1 RPLFCFPPAGGSA--SSYRPLAR-ALPDDVIGVYGIEYPGRGDDE---PPPDSIEELASRYA---EAIRARQ-PEGPYVL 70 (229)
T ss_dssp -EEEEESSTTCSG--GGGHHHHH-HHTTTEEEEEEECSTTSCTTS---HEESSHHHHHHHHH---HHHHHHT-SSSSEEE
T ss_pred CeEEEEcCCccCH--HHHHHHHH-hCCCCeEEEEEEecCCCCCCC---CCCCCHHHHHHHHH---HHhhhhC-CCCCeee
Confidence 4799999998877 46788887 555324999999999886321 22344555544443 3433322 2238999
Q ss_pred EEechhhHHHhhhhhhcc---CcccceeeecCCCccc
Q psy16575 106 VGHSLGAHICGMMSNHLT---HRMHKIIGIDPARPLV 139 (247)
Q Consensus 106 iGhSlGg~va~~~a~~~~---~~v~~i~~LdPa~p~f 139 (247)
+|||+||.||..+|+++. .++.+++.+|...|..
T Consensus 71 ~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~ 107 (229)
T PF00975_consen 71 AGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSI 107 (229)
T ss_dssp EEETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTC
T ss_pred hccCccHHHHHHHHHHHHHhhhccCceEEecCCCCCc
Confidence 999999999999998874 4588999999766643
No 84
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.77 E-value=2.9e-08 Score=99.92 Aligned_cols=104 Identities=14% Similarity=0.194 Sum_probs=64.3
Q ss_pred CCCeEEEEeCCCCCCCCChHHH-----HHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCC
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTI-----IRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGA 98 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~-----l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~ 98 (247)
..+++||||||..+... |.. +.. +|.+.||.|+++||........+ ...........+.+.++.+.+...
T Consensus 66 ~~~plllvhg~~~~~~~--~d~~~~~s~v~-~L~~~g~~v~~~d~G~~~~~~~~--~~~~l~~~i~~l~~~l~~v~~~~~ 140 (994)
T PRK07868 66 VGPPVLMVHPMMMSADM--WDVTRDDGAVG-ILHRAGLDPWVIDFGSPDKVEGG--MERNLADHVVALSEAIDTVKDVTG 140 (994)
T ss_pred CCCcEEEECCCCCCccc--eecCCcccHHH-HHHHCCCEEEEEcCCCCChhHcC--ccCCHHHHHHHHHHHHHHHHHhhC
Confidence 45899999999888743 222 244 66666899999999633221111 011111111233344443333332
Q ss_pred CCccEEEEEechhhHHHhhhhh-hccCcccceeeecC
Q psy16575 99 SAYDIHCVGHSLGAHICGMMSN-HLTHRMHKIIGIDP 134 (247)
Q Consensus 99 ~~~~i~liGhSlGg~va~~~a~-~~~~~v~~i~~LdP 134 (247)
++++|+||||||.++..++. +.+++|++++.+++
T Consensus 141 --~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~ 175 (994)
T PRK07868 141 --RDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGS 175 (994)
T ss_pred --CceEEEEEChhHHHHHHHHHhcCCCccceEEEEec
Confidence 68999999999999966655 44568999987654
No 85
>KOG4627|consensus
Probab=98.75 E-value=4.3e-08 Score=79.69 Aligned_cols=103 Identities=17% Similarity=0.187 Sum_probs=63.8
Q ss_pred CCCCCeEEEEeC-CCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCC
Q psy16575 22 DPHKRNVIIIHG-FNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASA 100 (247)
Q Consensus 22 ~~~~~~vv~iHG-~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~ 100 (247)
+...|+.||||| ++.-++......++... .+.||+|..++|.-..+. ......-.+....++++.+.--+.
T Consensus 64 ~~~~klfIfIHGGYW~~g~rk~clsiv~~a-~~~gY~vasvgY~l~~q~-------htL~qt~~~~~~gv~filk~~~n~ 135 (270)
T KOG4627|consen 64 TNQAKLFIFIHGGYWQEGDRKMCLSIVGPA-VRRGYRVASVGYNLCPQV-------HTLEQTMTQFTHGVNFILKYTENT 135 (270)
T ss_pred CCCccEEEEEecchhhcCchhcccchhhhh-hhcCeEEEEeccCcCccc-------ccHHHHHHHHHHHHHHHHHhcccc
Confidence 345689999999 44444333333444433 445799999999876543 122333334455556643332245
Q ss_pred ccEEEEEechhhHHHhhhhh-hccCcccceeee
Q psy16575 101 YDIHCVGHSLGAHICGMMSN-HLTHRMHKIIGI 132 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~-~~~~~v~~i~~L 132 (247)
+++.+-|||.|||+|..+.. ....+|..++.+
T Consensus 136 k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~ 168 (270)
T KOG4627|consen 136 KVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILL 168 (270)
T ss_pred eeEEEcccchHHHHHHHHHHHhcCchHHHHHHH
Confidence 78999999999999976654 444566665544
No 86
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.73 E-value=9.3e-08 Score=79.49 Aligned_cols=107 Identities=14% Similarity=0.121 Sum_probs=72.4
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCC--CCChHHHhhc--------HHHHHHHHHHHHHHH
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAP--FPCYLSSLSN--------TRLVAQCAAQFYSHL 93 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~--~~~y~~~~~~--------~~~v~~~l~~~i~~l 93 (247)
.+|.||++|++.+-. .+.+.+++.+. ..||.|+++|+-.... ...+...... .+.+..++...++.|
T Consensus 13 ~~~~Vvv~~d~~G~~--~~~~~~ad~lA-~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l 89 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLN--PNIRDLADRLA-EEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYL 89 (218)
T ss_dssp SEEEEEEE-BTTBS---HHHHHHHHHHH-HTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCc--hHHHHHHHHHH-hcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 468999999988866 56778887554 4579999999765443 1112111111 234555666677887
Q ss_pred HHcC-CCCccEEEEEechhhHHHhhhhhhccCcccceeeecC
Q psy16575 94 THHG-ASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDP 134 (247)
Q Consensus 94 ~~~~-~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdP 134 (247)
.+.. .+.++|.++|+|+||.+|..++... .++...+...|
T Consensus 90 ~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg 130 (218)
T PF01738_consen 90 RAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYG 130 (218)
T ss_dssp HCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-
T ss_pred HhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcC
Confidence 7654 5678999999999999999988876 56888888887
No 87
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.72 E-value=7.3e-08 Score=81.14 Aligned_cols=108 Identities=20% Similarity=0.254 Sum_probs=71.4
Q ss_pred CCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHH-----c
Q psy16575 22 DPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTH-----H 96 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~-----~ 96 (247)
...-|+|+|+|||.-.. .++.++.. .+...||-|++++........ ....++..++.+.++-+-|.. -
T Consensus 43 ~G~yPVilF~HG~~l~n--s~Ys~lL~-HIASHGfIVVAPQl~~~~~p~----~~~Ei~~aa~V~~WL~~gL~~~Lp~~V 115 (307)
T PF07224_consen 43 AGTYPVILFLHGFNLYN--SFYSQLLA-HIASHGFIVVAPQLYTLFPPD----GQDEIKSAASVINWLPEGLQHVLPENV 115 (307)
T ss_pred CCCccEEEEeechhhhh--HHHHHHHH-HHhhcCeEEEechhhcccCCC----chHHHHHHHHHHHHHHhhhhhhCCCCc
Confidence 44568999999987764 57888776 667788999999987653321 112222222222222222322 1
Q ss_pred CCCCccEEEEEechhhHHHhhhhhhc--cCcccceeeecCCC
Q psy16575 97 GASAYDIHCVGHSLGAHICGMMSNHL--THRMHKIIGIDPAR 136 (247)
Q Consensus 97 ~~~~~~i~liGhSlGg~va~~~a~~~--~~~v~~i~~LdPa~ 136 (247)
..+++++.|+|||-||..|-.+|..+ .-++..+++|||-.
T Consensus 116 ~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 116 EANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred ccccceEEEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 34668999999999999986655543 34688999999964
No 88
>KOG1838|consensus
Probab=98.71 E-value=1.1e-07 Score=85.14 Aligned_cols=96 Identities=16% Similarity=0.225 Sum_probs=68.1
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCcc
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYD 102 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~ 102 (247)
.+.|++|++||.+++..+.+.+.++. .+++.||+|++++-||++.++ -.+..........++..+++++++. .+..+
T Consensus 123 ~~~P~vvilpGltg~S~~~YVr~lv~-~a~~~G~r~VVfN~RG~~g~~-LtTpr~f~ag~t~Dl~~~v~~i~~~-~P~a~ 199 (409)
T KOG1838|consen 123 GTDPIVVILPGLTGGSHESYVRHLVH-EAQRKGYRVVVFNHRGLGGSK-LTTPRLFTAGWTEDLREVVNHIKKR-YPQAP 199 (409)
T ss_pred CCCcEEEEecCCCCCChhHHHHHHHH-HHHhCCcEEEEECCCCCCCCc-cCCCceeecCCHHHHHHHHHHHHHh-CCCCc
Confidence 46799999999999888788888887 556667999999999977652 1111111112234666777776543 35578
Q ss_pred EEEEEechhhHHH-hhhhhh
Q psy16575 103 IHCVGHSLGAHIC-GMMSNH 121 (247)
Q Consensus 103 i~liGhSlGg~va-~~~a~~ 121 (247)
+..+|+||||.+. -|+|+.
T Consensus 200 l~avG~S~Gg~iL~nYLGE~ 219 (409)
T KOG1838|consen 200 LFAVGFSMGGNILTNYLGEE 219 (409)
T ss_pred eEEEEecchHHHHHHHhhhc
Confidence 9999999999877 555554
No 89
>KOG4391|consensus
Probab=98.69 E-value=2.8e-08 Score=81.42 Aligned_cols=104 Identities=13% Similarity=0.149 Sum_probs=74.9
Q ss_pred CCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHH-HcCCCC
Q psy16575 22 DPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLT-HHGASA 100 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~-~~~~~~ 100 (247)
+.++||+++.|+-.++.. ....+++-+...-+.||+.++||+++.+..-++ .+.+--+....++.|. ....+.
T Consensus 75 E~S~pTlLyfh~NAGNmG--hr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gsps----E~GL~lDs~avldyl~t~~~~dk 148 (300)
T KOG4391|consen 75 ESSRPTLLYFHANAGNMG--HRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPS----EEGLKLDSEAVLDYLMTRPDLDK 148 (300)
T ss_pred cCCCceEEEEccCCCccc--chhhHHHHHHHHcCceEEEEEeeccccCCCCcc----ccceeccHHHHHHHHhcCccCCc
Confidence 347899999999888874 345556667777789999999999998743221 1222223344566654 445567
Q ss_pred ccEEEEEechhhHHHhhhhhhccCcccceee
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHLTHRMHKIIG 131 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~~~~v~~i~~ 131 (247)
.++.|.|-|+||.+|..++.....++..++.
T Consensus 149 tkivlfGrSlGGAvai~lask~~~ri~~~iv 179 (300)
T KOG4391|consen 149 TKIVLFGRSLGGAVAIHLASKNSDRISAIIV 179 (300)
T ss_pred ceEEEEecccCCeeEEEeeccchhheeeeee
Confidence 8999999999999999988887777766653
No 90
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.68 E-value=1.4e-07 Score=76.00 Aligned_cols=90 Identities=19% Similarity=0.230 Sum_probs=59.4
Q ss_pred EEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHc-CCCCccEEEE
Q psy16575 28 VIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHH-GASAYDIHCV 106 (247)
Q Consensus 28 vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~-~~~~~~i~li 106 (247)
|++||||.++....|+..+.+ -+... +.|-..|| ..| .+.+.+..|.+. ....+++.||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~-~l~~~-~~V~~~~~----~~P--------------~~~~W~~~l~~~i~~~~~~~ilV 60 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLER-QLENS-VRVEQPDW----DNP--------------DLDEWVQALDQAIDAIDEPTILV 60 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHH-HHTTS-EEEEEC------TS----------------HHHHHHHHHHCCHC-TTTEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHH-hCCCC-eEEecccc----CCC--------------CHHHHHHHHHHHHhhcCCCeEEE
Confidence 689999999999889888887 44544 88888887 222 122233333321 1123579999
Q ss_pred EechhhHHHhhhh-hhccCcccceeeecCCCc
Q psy16575 107 GHSLGAHICGMMS-NHLTHRMHKIIGIDPARP 137 (247)
Q Consensus 107 GhSlGg~va~~~a-~~~~~~v~~i~~LdPa~p 137 (247)
|||||...+..++ .....+|++++.+.|..+
T Consensus 61 aHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 61 AHSLGCLTALRWLAEQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp EETHHHHHHHHHHHHTCCSSEEEEEEES--SC
T ss_pred EeCHHHHHHHHHHhhcccccccEEEEEcCCCc
Confidence 9999999997777 777789999999988766
No 91
>COG0400 Predicted esterase [General function prediction only]
Probab=98.66 E-value=1.9e-07 Score=77.22 Aligned_cols=114 Identities=21% Similarity=0.228 Sum_probs=73.8
Q ss_pred CCCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEc----CCCCCCCC-ChHHH---hhcHHHHHHHHHHHHHH
Q psy16575 21 WDPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLD----FADLAPFP-CYLSS---LSNTRLVAQCAAQFYSH 92 (247)
Q Consensus 21 ~~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD----~~~~~~~~-~y~~~---~~~~~~v~~~l~~~i~~ 92 (247)
-++..|+||++||++++..+ +..+.. .+ ..++.++.+. +.+..+.. .+... ..+...-...++++++.
T Consensus 14 ~~p~~~~iilLHG~Ggde~~--~~~~~~-~~-~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~ 89 (207)
T COG0400 14 GDPAAPLLILLHGLGGDELD--LVPLPE-LI-LPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEE 89 (207)
T ss_pred CCCCCcEEEEEecCCCChhh--hhhhhh-hc-CCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHH
Confidence 35667899999999977643 222332 22 2347777654 21111110 01111 22233333445555554
Q ss_pred H-HHcCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCCcc
Q psy16575 93 L-THHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARPL 138 (247)
Q Consensus 93 l-~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p~ 138 (247)
+ .+.+++.+++.++|||.||.|+..++...++.+++++++.|.-|.
T Consensus 90 ~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~ 136 (207)
T COG0400 90 LAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPL 136 (207)
T ss_pred HHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCC
Confidence 3 468899999999999999999999999999999999999888664
No 92
>KOG1552|consensus
Probab=98.63 E-value=1.4e-07 Score=79.29 Aligned_cols=102 Identities=16% Similarity=0.147 Sum_probs=72.4
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHH-cCCCCccE
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTH-HGASAYDI 103 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~-~~~~~~~i 103 (247)
++++|+.||-..... .+..+...+-..-++||+.+||++++.+..-+ .....-+++....++|++ .| +.++|
T Consensus 60 ~~~lly~hGNa~Dlg--q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~p----sE~n~y~Di~avye~Lr~~~g-~~~~I 132 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLG--QMVELFKELSIFLNCNVVSYDYSGYGRSSGKP----SERNLYADIKAVYEWLRNRYG-SPERI 132 (258)
T ss_pred ceEEEEcCCcccchH--HHHHHHHHHhhcccceEEEEecccccccCCCc----ccccchhhHHHHHHHHHhhcC-CCceE
Confidence 589999999744432 22222222333357999999999999874322 222444677778888764 56 67999
Q ss_pred EEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 104 HCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 104 ~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
.|+|+|+|+..+..+|.+.+ +..++...|-
T Consensus 133 il~G~SiGt~~tv~Lasr~~--~~alVL~SPf 162 (258)
T KOG1552|consen 133 ILYGQSIGTVPTVDLASRYP--LAAVVLHSPF 162 (258)
T ss_pred EEEEecCCchhhhhHhhcCC--cceEEEeccc
Confidence 99999999999988888877 7777877654
No 93
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.61 E-value=4e-07 Score=78.44 Aligned_cols=112 Identities=15% Similarity=0.155 Sum_probs=77.5
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhc--CCcEEEEEcCCCCCCCCChH--HHhhcHHHHHHHHHHHHHHHHHc----
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRR--RDYNVFMLDFADLAPFPCYL--SSLSNTRLVAQCAAQFYSHLTHH---- 96 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~--~~~~Vi~vD~~~~~~~~~y~--~~~~~~~~v~~~l~~~i~~l~~~---- 96 (247)
+..+|+|.|-.|-. +++..+.+++.++ ..+.|+++.+.|+...+... ......-.+.+++..-++.+++.
T Consensus 2 ~~li~~IPGNPGlv--~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~ 79 (266)
T PF10230_consen 2 RPLIVFIPGNPGLV--EFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQK 79 (266)
T ss_pred cEEEEEECCCCChH--HHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhh
Confidence 46899999988877 5677776655544 57999999999987653220 00122333444444444443321
Q ss_pred CCCCccEEEEEechhhHHHhhhhhhcc---CcccceeeecCCCcc
Q psy16575 97 GASAYDIHCVGHSLGAHICGMMSNHLT---HRMHKIIGIDPARPL 138 (247)
Q Consensus 97 ~~~~~~i~liGhSlGg~va~~~a~~~~---~~v~~i~~LdPa~p~ 138 (247)
..+..+++|||||+||.|+..+.++++ .+|.++++|-|.---
T Consensus 80 ~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 80 NKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred cCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 114478999999999999999999998 688899999887443
No 94
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.56 E-value=4.5e-07 Score=73.99 Aligned_cols=92 Identities=16% Similarity=0.250 Sum_probs=58.9
Q ss_pred eEEEEeCCCCCCCCChHHHHHHHHHhcCC--cEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEE
Q psy16575 27 NVIIIHGFNQSESQSPMTIIRDAYIRRRD--YNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIH 104 (247)
Q Consensus 27 ~vv~iHG~~~~~~~~~~~~l~~~~l~~~~--~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~ 104 (247)
.++++|||.+++.+.....+++ ++++.+ ..+..+|.+... ..+...+.+++ .+. ..+.+.
T Consensus 1 ~ilYlHGF~Ssp~S~Ka~~l~~-~~~~~~~~~~~~~p~l~~~p------------~~a~~~l~~~i---~~~--~~~~~~ 62 (187)
T PF05728_consen 1 MILYLHGFNSSPQSFKAQALKQ-YFAEHGPDIQYPCPDLPPFP------------EEAIAQLEQLI---EEL--KPENVV 62 (187)
T ss_pred CeEEecCCCCCCCCHHHHHHHH-HHHHhCCCceEECCCCCcCH------------HHHHHHHHHHH---HhC--CCCCeE
Confidence 3799999999998755556665 665533 455655543221 11112333333 332 235699
Q ss_pred EEEechhhHHHhhhhhhccCcccceeeecCCCccc
Q psy16575 105 CVGHSLGAHICGMMSNHLTHRMHKIIGIDPARPLV 139 (247)
Q Consensus 105 liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p~f 139 (247)
|||.||||..|.+++.+++- +. +.+.||....
T Consensus 63 liGSSlGG~~A~~La~~~~~--~a-vLiNPav~p~ 94 (187)
T PF05728_consen 63 LIGSSLGGFYATYLAERYGL--PA-VLINPAVRPY 94 (187)
T ss_pred EEEEChHHHHHHHHHHHhCC--CE-EEEcCCCCHH
Confidence 99999999999999988753 33 7789986543
No 95
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.56 E-value=2.8e-07 Score=76.24 Aligned_cols=87 Identities=10% Similarity=0.121 Sum_probs=60.2
Q ss_pred HHhcCCcEEEEEcCCCCCCCCC-hHHH-h-hcHHHHHHHHHHHHHHHHH-cCCCCccEEEEEechhhHHHhhhhhhccCc
Q psy16575 50 YIRRRDYNVFMLDFADLAPFPC-YLSS-L-SNTRLVAQCAAQFYSHLTH-HGASAYDIHCVGHSLGAHICGMMSNHLTHR 125 (247)
Q Consensus 50 ~l~~~~~~Vi~vD~~~~~~~~~-y~~~-~-~~~~~v~~~l~~~i~~l~~-~~~~~~~i~liGhSlGg~va~~~a~~~~~~ 125 (247)
+|...||.|+.+|+|+.+.... +... . .......+++...++++.+ ..+++++|.++|||+||+++..++...|++
T Consensus 9 ~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~ 88 (213)
T PF00326_consen 9 LLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDR 88 (213)
T ss_dssp HHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCG
T ss_pred HHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhccccee
Confidence 7777889999999999775421 1110 0 1112334456666777654 457889999999999999999999988988
Q ss_pred ccceeeecCCC
Q psy16575 126 MHKIIGIDPAR 136 (247)
Q Consensus 126 v~~i~~LdPa~ 136 (247)
++.++...|..
T Consensus 89 f~a~v~~~g~~ 99 (213)
T PF00326_consen 89 FKAAVAGAGVS 99 (213)
T ss_dssp SSEEEEESE-S
T ss_pred eeeeeccceec
Confidence 88888777653
No 96
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.56 E-value=1.4e-06 Score=73.67 Aligned_cols=109 Identities=12% Similarity=0.102 Sum_probs=77.0
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCC-CCCCChH--H-Hh-------hcHHHHHHHHHHHHHHH
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADL-APFPCYL--S-SL-------SNTRLVAQCAAQFYSHL 93 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~-~~~~~y~--~-~~-------~~~~~v~~~l~~~i~~l 93 (247)
.|.||++|++.+-. ..++.+++ .|...||-|+++|+-.. +...... . .. .....+..++...+++|
T Consensus 27 ~P~VIv~hei~Gl~--~~i~~~a~-rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L 103 (236)
T COG0412 27 FPGVIVLHEIFGLN--PHIRDVAR-RLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYL 103 (236)
T ss_pred CCEEEEEecccCCc--hHHHHHHH-HHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHH
Confidence 38999999988877 46788887 56667899999996542 1111111 1 11 11145556777778888
Q ss_pred HHcC-CCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCCc
Q psy16575 94 THHG-ASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARP 137 (247)
Q Consensus 94 ~~~~-~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p 137 (247)
.... .+.++|.++|+||||.++..++...+ +++..+...|..+
T Consensus 104 ~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~ 147 (236)
T COG0412 104 ARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLI 147 (236)
T ss_pred HhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCC
Confidence 7654 67789999999999999999988866 5777777766644
No 97
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.55 E-value=1.8e-07 Score=78.17 Aligned_cols=92 Identities=15% Similarity=0.269 Sum_probs=52.1
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHh---c-CCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHH-HHHcCC
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIR---R-RDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSH-LTHHGA 98 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~---~-~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~-l~~~~~ 98 (247)
....||++||+.++.. .+..+++.+.. . .+-+++..-+... .......++..++.+++.|.. +.....
T Consensus 3 ~~hLvV~vHGL~G~~~--d~~~~~~~l~~~~~~~~~~~i~~~~~~~n-----~~~T~~gI~~~g~rL~~eI~~~~~~~~~ 75 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPA--DMRYLKNHLEKIPEDLPNARIVVLGYSNN-----EFKTFDGIDVCGERLAEEILEHIKDYES 75 (217)
T ss_pred CCEEEEEeCCCCCCHH--HHHHHHHHHHHhhhhcchhhhhhhccccc-----ccccchhhHHHHHHHHHHHHHhcccccc
Confidence 4568999999999864 35566654433 1 1112222222111 111223455556665554443 333332
Q ss_pred CCccEEEEEechhhHHHhhhhhhc
Q psy16575 99 SAYDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 99 ~~~~i~liGhSlGg~va~~~a~~~ 122 (247)
...+|.+|||||||.|+.++....
T Consensus 76 ~~~~IsfIgHSLGGli~r~al~~~ 99 (217)
T PF05057_consen 76 KIRKISFIGHSLGGLIARYALGLL 99 (217)
T ss_pred ccccceEEEecccHHHHHHHHHHh
Confidence 236899999999999998877654
No 98
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.54 E-value=2.5e-07 Score=83.84 Aligned_cols=106 Identities=17% Similarity=0.197 Sum_probs=71.6
Q ss_pred CCeEEEEeCCCCCCC-----------CChHHHHHHH--HHhcCCcEEEEEcCCCCCC--CC------------C----hH
Q psy16575 25 KRNVIIIHGFNQSES-----------QSPMTIIRDA--YIRRRDYNVFMLDFADLAP--FP------------C----YL 73 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~-----------~~~~~~l~~~--~l~~~~~~Vi~vD~~~~~~--~~------------~----y~ 73 (247)
.+.||+.|+++++.. ..||..+.-. .+....|-||++|.-+... +| . |.
T Consensus 56 ~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~ 135 (389)
T PRK06765 56 SNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYG 135 (389)
T ss_pred CCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccC
Confidence 479999999988531 2467665421 2444469999999775421 11 0 10
Q ss_pred --HHhhcHHHHHHHHHHHHHHHHHcCCCCccEE-EEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 74 --SSLSNTRLVAQCAAQFYSHLTHHGASAYDIH-CVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 74 --~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~-liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
-....+++..+.+..+++ +.++ ++++ +|||||||.+|..++..+|+++.+++.+..+
T Consensus 136 ~~fP~~t~~d~~~~~~~ll~---~lgi--~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~ 195 (389)
T PRK06765 136 MDFPVVTILDFVRVQKELIK---SLGI--ARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGN 195 (389)
T ss_pred CCCCcCcHHHHHHHHHHHHH---HcCC--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEecC
Confidence 011244555555555544 4555 7887 9999999999999999999999999998654
No 99
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.50 E-value=6.1e-07 Score=76.62 Aligned_cols=107 Identities=16% Similarity=0.259 Sum_probs=61.8
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCC--cEEEEE--c----------CCCCCCCC----ChHHHh-hcHHHHH
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRD--YNVFML--D----------FADLAPFP----CYLSSL-SNTRLVA 83 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~--~~Vi~v--D----------~~~~~~~~----~y~~~~-~~~~~v~ 83 (247)
.+..+.||||||.++... +..|.+++-.+.+ -.++.+ + |......| .+.... .+...-+
T Consensus 9 ~~~tPTifihG~~gt~~s--~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa 86 (255)
T PF06028_consen 9 QSTTPTIFIHGYGGTANS--FNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQA 86 (255)
T ss_dssp -S-EEEEEE--TTGGCCC--CHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHH
T ss_pred cCCCcEEEECCCCCChhH--HHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHH
Confidence 345688999999999854 5667764541332 233333 2 22211111 111222 2455667
Q ss_pred HHHHHHHHHHHH-cCCCCccEEEEEechhhHHHhhhhhhcc-----Ccccceeeec
Q psy16575 84 QCAAQFYSHLTH-HGASAYDIHCVGHSLGAHICGMMSNHLT-----HRMHKIIGID 133 (247)
Q Consensus 84 ~~l~~~i~~l~~-~~~~~~~i~liGhSlGg~va~~~a~~~~-----~~v~~i~~Ld 133 (247)
+.+..++..|.+ +++ +++.+|||||||.++.++...+. .++.+++.|+
T Consensus 87 ~wl~~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia 140 (255)
T PF06028_consen 87 KWLKKVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIA 140 (255)
T ss_dssp HHHHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES
T ss_pred HHHHHHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEec
Confidence 788888888864 565 89999999999999977665542 2578888885
No 100
>KOG1515|consensus
Probab=98.45 E-value=1.6e-06 Score=76.79 Aligned_cols=112 Identities=13% Similarity=0.107 Sum_probs=79.4
Q ss_pred CCCCeEEEEeCC---CCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHH-HHHcCC
Q psy16575 23 PHKRNVIIIHGF---NQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSH-LTHHGA 98 (247)
Q Consensus 23 ~~~~~vv~iHG~---~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~-l~~~~~ 98 (247)
...|.+|++||- .++.....+..+......+-+..|+++|||-....+ ++.+ .++.-..+..+.+. +.+.+.
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~-~Pa~---y~D~~~Al~w~~~~~~~~~~~ 163 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHP-FPAA---YDDGWAALKWVLKNSWLKLGA 163 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCC-CCcc---chHHHHHHHHHHHhHHHHhCC
Confidence 457999999993 233333455556655556778999999999988763 4333 23344556666665 667788
Q ss_pred CCccEEEEEechhhHHHhhhhhhcc------CcccceeeecCCCcc
Q psy16575 99 SAYDIHCVGHSLGAHICGMMSNHLT------HRMHKIIGIDPARPL 138 (247)
Q Consensus 99 ~~~~i~liGhSlGg~va~~~a~~~~------~~v~~i~~LdPa~p~ 138 (247)
+++++.|.|-|.||-||..++.+.. .++.+++.+-|..-.
T Consensus 164 D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~ 209 (336)
T KOG1515|consen 164 DPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQG 209 (336)
T ss_pred CcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCC
Confidence 9999999999999999877776542 467788888876433
No 101
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.43 E-value=8.9e-07 Score=79.98 Aligned_cols=110 Identities=20% Similarity=0.173 Sum_probs=58.0
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChH----H---H--------------------
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYL----S---S-------------------- 75 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~----~---~-------------------- 75 (247)
.+-|+|||-||+.++... +..+... |+..||-|+++|.+..+....+. . .
T Consensus 98 ~~~PvvIFSHGlgg~R~~--yS~~~~e-LAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTS--YSAICGE-LASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDP 174 (379)
T ss_dssp S-EEEEEEE--TT--TTT--THHHHHH-HHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----G
T ss_pred CCCCEEEEeCCCCcchhh--HHHHHHH-HHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccc
Confidence 446999999999999854 6677764 45568999999999754221110 0 0
Q ss_pred ----hhcHHHHHH---HHHHHHHHHHH--c-------------------CCCCccEEEEEechhhHHHhhhhhhccCccc
Q psy16575 76 ----LSNTRLVAQ---CAAQFYSHLTH--H-------------------GASAYDIHCVGHSLGAHICGMMSNHLTHRMH 127 (247)
Q Consensus 76 ----~~~~~~v~~---~l~~~i~~l~~--~-------------------~~~~~~i~liGhSlGg~va~~~a~~~~~~v~ 127 (247)
.....++.. .+...++.|.+ . .++.++|.++|||+||..+..++..- .+++
T Consensus 175 ~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~ 253 (379)
T PF03403_consen 175 EEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFK 253 (379)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcc
Confidence 000112222 23334443321 1 23467899999999999998877664 6688
Q ss_pred ceeeecCCC
Q psy16575 128 KIIGIDPAR 136 (247)
Q Consensus 128 ~i~~LdPa~ 136 (247)
..+.|||..
T Consensus 254 ~~I~LD~W~ 262 (379)
T PF03403_consen 254 AGILLDPWM 262 (379)
T ss_dssp EEEEES---
T ss_pred eEEEeCCcc
Confidence 899999974
No 102
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.40 E-value=4.8e-07 Score=63.39 Aligned_cols=63 Identities=19% Similarity=0.311 Sum_probs=46.2
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHH
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFY 90 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i 90 (247)
+.+|+++||+.++. ..+..+++ .|.+.||.|+++|+++++.+........+.+.+-+++..++
T Consensus 16 k~~v~i~HG~~eh~--~ry~~~a~-~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 16 KAVVVIVHGFGEHS--GRYAHLAE-FLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CEEEEEeCCcHHHH--HHHHHHHH-HHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 66999999998887 46888887 67778899999999999988543333344455545554443
No 103
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.38 E-value=2e-06 Score=78.51 Aligned_cols=128 Identities=16% Similarity=0.071 Sum_probs=78.0
Q ss_pred CCceEEecCCCCccccCCCCCCCCeEEEEeC---CCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCC----CChH--
Q psy16575 3 GTKTRINILKSNSLKYAGWDPHKRNVIIIHG---FNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPF----PCYL-- 73 (247)
Q Consensus 3 ~~g~~i~~~~~~~l~~s~~~~~~~~vv~iHG---~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~----~~y~-- 73 (247)
+|--.|++..++ . -....|++|+||| -.++....++.. . .+.+++++-|++++||-...- +.+.
T Consensus 77 EDCL~LNIwaP~-~----~a~~~PVmV~IHGG~y~~Gs~s~~~ydg-s-~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~ 149 (491)
T COG2272 77 EDCLYLNIWAPE-V----PAEKLPVMVYIHGGGYIMGSGSEPLYDG-S-ALAARGDVVVVSVNYRLGALGFLDLSSLDTE 149 (491)
T ss_pred ccceeEEeeccC-C----CCCCCcEEEEEeccccccCCCcccccCh-H-HHHhcCCEEEEEeCcccccceeeehhhcccc
Confidence 455566666655 1 1234699999999 244444333332 2 244555699999999954311 1111
Q ss_pred H---HhhcHHHHHHHHHHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhh--ccCcccceeeecCCCc
Q psy16575 74 S---SLSNTRLVAQCAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNH--LTHRMHKIIGIDPARP 137 (247)
Q Consensus 74 ~---~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~--~~~~v~~i~~LdPa~p 137 (247)
. ...-..+....|.++-+.+..+|-|+++|+|+|+|.||+.+..+... ..+.+.|.+.+.|+..
T Consensus 150 ~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 150 DAFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred ccccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 0 01123344445666667788899999999999999999887554432 2245566666766543
No 104
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.37 E-value=3.5e-06 Score=68.32 Aligned_cols=101 Identities=18% Similarity=0.232 Sum_probs=75.9
Q ss_pred CeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHH-HcCCCCccEE
Q psy16575 26 RNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLT-HHGASAYDIH 104 (247)
Q Consensus 26 ~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~-~~~~~~~~i~ 104 (247)
..+||+-|=++-. ..-..+++ .|++.|+.|+.+|-. .|.......+.++.+++.+++... +.+. +++.
T Consensus 3 t~~v~~SGDgGw~--~~d~~~a~-~l~~~G~~VvGvdsl------~Yfw~~rtP~~~a~Dl~~~i~~y~~~w~~--~~vv 71 (192)
T PF06057_consen 3 TLAVFFSGDGGWR--DLDKQIAE-ALAKQGVPVVGVDSL------RYFWSERTPEQTAADLARIIRHYRARWGR--KRVV 71 (192)
T ss_pred EEEEEEeCCCCch--hhhHHHHH-HHHHCCCeEEEechH------HHHhhhCCHHHHHHHHHHHHHHHHHHhCC--ceEE
Confidence 3577777733322 23456676 566778999999932 366666677888999999998854 5555 7999
Q ss_pred EEEechhhHHHhhhhhhcc----CcccceeeecCCCc
Q psy16575 105 CVGHSLGAHICGMMSNHLT----HRMHKIIGIDPARP 137 (247)
Q Consensus 105 liGhSlGg~va~~~a~~~~----~~v~~i~~LdPa~p 137 (247)
|||+|.||-|.-++..++| .+|..++.|.|+.-
T Consensus 72 LiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 72 LIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred EEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 9999999999988888887 57889999988743
No 105
>KOG4667|consensus
Probab=98.34 E-value=2.7e-06 Score=69.87 Aligned_cols=105 Identities=14% Similarity=0.198 Sum_probs=73.5
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCcc
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYD 102 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~ 102 (247)
.+..++|+.|||.++.+...+..++. .+++.|+-++.+|+++.+.+..- -...+.+..++++..+++.+.... .-=
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~-~~e~~gis~fRfDF~GnGeS~gs-f~~Gn~~~eadDL~sV~q~~s~~n--r~v 106 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAK-ALEKEGISAFRFDFSGNGESEGS-FYYGNYNTEADDLHSVIQYFSNSN--RVV 106 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHH-HHHhcCceEEEEEecCCCCcCCc-cccCcccchHHHHHHHHHHhccCc--eEE
Confidence 45689999999999987656666665 67788899999999998766311 111233344577777777765422 122
Q ss_pred EEEEEechhhHHHhhhhhhccCcccceeee
Q psy16575 103 IHCVGHSLGAHICGMMSNHLTHRMHKIIGI 132 (247)
Q Consensus 103 i~liGhSlGg~va~~~a~~~~~~v~~i~~L 132 (247)
-.++|||=||-++...+..+.+ +..++-+
T Consensus 107 ~vi~gHSkGg~Vvl~ya~K~~d-~~~viNc 135 (269)
T KOG4667|consen 107 PVILGHSKGGDVVLLYASKYHD-IRNVINC 135 (269)
T ss_pred EEEEeecCccHHHHHHHHhhcC-chheEEc
Confidence 4689999999999877777765 4455544
No 106
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.32 E-value=4.7e-06 Score=80.00 Aligned_cols=111 Identities=14% Similarity=0.201 Sum_probs=67.9
Q ss_pred CCCCCC--CeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCC-ChHHHhh--cHHHHHHHHHHHHHHHH
Q psy16575 20 GWDPHK--RNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFP-CYLSSLS--NTRLVAQCAAQFYSHLT 94 (247)
Q Consensus 20 ~~~~~~--~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~-~y~~~~~--~~~~v~~~l~~~i~~l~ 94 (247)
.+++.+ |+||++||-........+....+ .+...||.|+.+|+|+..... .+..+.. ......+++.+.++.+.
T Consensus 387 ~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q-~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~ 465 (620)
T COG1506 387 GFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQ-VLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALV 465 (620)
T ss_pred CCCCCCCCCEEEEeCCCCccccccccchhhH-HHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHHHHH
Confidence 344443 89999999754433222233333 555568999999999865431 1111110 00112234445555555
Q ss_pred HcC-CCCccEEEEEechhhHHHhhhhhhccCcccceeee
Q psy16575 95 HHG-ASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGI 132 (247)
Q Consensus 95 ~~~-~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~L 132 (247)
+.+ ++.+++.+.|||.||.++..++.+.+ ++...+..
T Consensus 466 ~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~ 503 (620)
T COG1506 466 KLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAV 503 (620)
T ss_pred hCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEec
Confidence 544 57789999999999999999988877 45444444
No 107
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.28 E-value=2.3e-06 Score=71.48 Aligned_cols=107 Identities=14% Similarity=0.132 Sum_probs=69.3
Q ss_pred CCCeEEEEeCCCCCCCCChHH--HHHHHHHhcCCcEEEEEcCCCCCCC-CChH--H-HhhcHHHHHHHHHHHHHHHH-Hc
Q psy16575 24 HKRNVIIIHGFNQSESQSPMT--IIRDAYIRRRDYNVFMLDFADLAPF-PCYL--S-SLSNTRLVAQCAAQFYSHLT-HH 96 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~--~l~~~~l~~~~~~Vi~vD~~~~~~~-~~y~--~-~~~~~~~v~~~l~~~i~~l~-~~ 96 (247)
..|+||++||..++... +.. .+ +.+..+.|+-|+.++....... .++. . .......-...|+.+++.+. +.
T Consensus 15 ~~PLVv~LHG~~~~a~~-~~~~s~~-~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~ 92 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAED-FAAGSGW-NALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARY 92 (220)
T ss_pred CCCEEEEeCCCCCCHHH-HHhhcCH-HHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhc
Confidence 46899999999888742 111 11 2255567899998885432110 0111 1 00001111235677777754 67
Q ss_pred CCCCccEEEEEechhhHHHhhhhhhccCcccceeee
Q psy16575 97 GASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGI 132 (247)
Q Consensus 97 ~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~L 132 (247)
.+++++|++.|+|.||.++..++..+|+.+..+...
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~ 128 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVV 128 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhCCccceEEEee
Confidence 899999999999999999999999999977765543
No 108
>PRK04940 hypothetical protein; Provisional
Probab=98.26 E-value=6e-06 Score=66.59 Aligned_cols=89 Identities=12% Similarity=0.191 Sum_probs=52.5
Q ss_pred EEEEeCCCCCCCC--ChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEE
Q psy16575 28 VIIIHGFNQSESQ--SPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHC 105 (247)
Q Consensus 28 vv~iHG~~~~~~~--~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~l 105 (247)
||++|||.+++.+ ...+.++ ++ ..+++++ +++ ... +. ...+.+.+.+..+...+. .+++.|
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~--~~-~p~~~~~--~l~--~~~---P~------~a~~~l~~~i~~~~~~~~-~~~~~l 64 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQ--FI-DPDVRLI--SYS--TLH---PK------HDMQHLLKEVDKMLQLSD-DERPLI 64 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhhe--ee-CCCCeEE--ECC--CCC---HH------HHHHHHHHHHHHhhhccC-CCCcEE
Confidence 7999999999876 2233333 33 3345554 333 111 11 112233444433222111 257999
Q ss_pred EEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 106 VGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 106 iGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
||+||||.-|.+++.++. + +-+.+.||-
T Consensus 65 iGSSLGGyyA~~La~~~g--~-~aVLiNPAv 92 (180)
T PRK04940 65 CGVGLGGYWAERIGFLCG--I-RQVIFNPNL 92 (180)
T ss_pred EEeChHHHHHHHHHHHHC--C-CEEEECCCC
Confidence 999999999999999875 3 456788885
No 109
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.24 E-value=7.3e-06 Score=70.59 Aligned_cols=114 Identities=11% Similarity=0.044 Sum_probs=75.6
Q ss_pred CCCCCeEEEEeCCCCCCCCChHHHHH--H-------HHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHH
Q psy16575 22 DPHKRNVIIIHGFNQSESQSPMTIIR--D-------AYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSH 92 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~~~~~~~l~--~-------~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~ 92 (247)
....|+||..|+|..... ...... . ..+.+.||.|+.+|-|+.+.|....... ...-+++..+.|++
T Consensus 17 ~~~~P~il~~tpY~~~~~--~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~--~~~e~~D~~d~I~W 92 (272)
T PF02129_consen 17 GGPFPVILTRTPYGKGDQ--TASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM--SPNEAQDGYDTIEW 92 (272)
T ss_dssp SSSEEEEEEEESSTCTC---HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT--SHHHHHHHHHHHHH
T ss_pred CCcccEEEEccCcCCCCC--cccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC--ChhHHHHHHHHHHH
Confidence 445689999999986541 111111 0 0145568999999999988774322211 33345688889999
Q ss_pred HHHcCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCCccc
Q psy16575 93 LTHHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARPLV 139 (247)
Q Consensus 93 l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p~f 139 (247)
+.++..+..+|-++|.|.+|..+..++...+..++.|+...+....+
T Consensus 93 ~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 93 IAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLY 139 (272)
T ss_dssp HHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTC
T ss_pred HHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCccc
Confidence 88776666799999999999999999997777788777665554443
No 110
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.22 E-value=1.1e-05 Score=75.45 Aligned_cols=104 Identities=12% Similarity=0.187 Sum_probs=67.3
Q ss_pred CCCeEEEEeCCCCCCCC---ChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHH-cCCC
Q psy16575 24 HKRNVIIIHGFNQSESQ---SPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTH-HGAS 99 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~---~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~-~~~~ 99 (247)
.++++|||+.|.....- .--..+++ +|.+.|+.|+++||+.-+... ......+-.+.+.+.++.+.+ .|.
T Consensus 214 ~~~PLLIVPp~INK~YIlDL~P~~SlVr-~lv~qG~~VflIsW~nP~~~~----r~~~ldDYv~~i~~Ald~V~~~tG~- 287 (560)
T TIGR01839 214 HARPLLVVPPQINKFYIFDLSPEKSFVQ-YCLKNQLQVFIISWRNPDKAH----REWGLSTYVDALKEAVDAVRAITGS- 287 (560)
T ss_pred CCCcEEEechhhhhhheeecCCcchHHH-HHHHcCCeEEEEeCCCCChhh----cCCCHHHHHHHHHHHHHHHHHhcCC-
Confidence 35789999998755420 01134555 666678999999999855331 111222222356666666543 443
Q ss_pred CccEEEEEechhhHHHhh----hhhhccC-cccceeeecC
Q psy16575 100 AYDIHCVGHSLGAHICGM----MSNHLTH-RMHKIIGIDP 134 (247)
Q Consensus 100 ~~~i~liGhSlGg~va~~----~a~~~~~-~v~~i~~LdP 134 (247)
++|+++||||||.++.. ++...++ +|+.+|.+..
T Consensus 288 -~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllat 326 (560)
T TIGR01839 288 -RDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVS 326 (560)
T ss_pred -CCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeec
Confidence 79999999999999875 4444554 7999887653
No 111
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.21 E-value=7.3e-06 Score=69.98 Aligned_cols=101 Identities=13% Similarity=0.094 Sum_probs=71.1
Q ss_pred CeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEE
Q psy16575 26 RNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHC 105 (247)
Q Consensus 26 ~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~l 105 (247)
|+++++|+-.+.. ..+..|.. ++... ..|+.++.++..... ....+.+. .++..++.+.+.. +--+++|
T Consensus 1 ~pLF~fhp~~G~~--~~~~~L~~-~l~~~-~~v~~l~a~g~~~~~---~~~~~l~~---~a~~yv~~Ir~~Q-P~GPy~L 69 (257)
T COG3319 1 PPLFCFHPAGGSV--LAYAPLAA-ALGPL-LPVYGLQAPGYGAGE---QPFASLDD---MAAAYVAAIRRVQ-PEGPYVL 69 (257)
T ss_pred CCEEEEcCCCCcH--HHHHHHHH-HhccC-ceeeccccCcccccc---cccCCHHH---HHHHHHHHHHHhC-CCCCEEE
Confidence 6899999988877 34666765 66654 899999988875321 11223333 3444444443322 2358999
Q ss_pred EEechhhHHHhhhhhhc---cCcccceeeecCCCc
Q psy16575 106 VGHSLGAHICGMMSNHL---THRMHKIIGIDPARP 137 (247)
Q Consensus 106 iGhSlGg~va~~~a~~~---~~~v~~i~~LdPa~p 137 (247)
+|||+||.||..+|+++ .+.|..++.||+..+
T Consensus 70 ~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 70 LGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred EeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999999999886 357999999998876
No 112
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.21 E-value=4.5e-06 Score=74.26 Aligned_cols=102 Identities=14% Similarity=0.255 Sum_probs=70.6
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcE---EEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHH-HHHcCCCC
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYN---VFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSH-LTHHGASA 100 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~---Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~-l~~~~~~~ 100 (247)
.-+++++||...... .+..+.. ++...++. +..+++++.... +. ....+.++...++. +...+.
T Consensus 59 ~~pivlVhG~~~~~~--~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~--~~-----~~~~~~ql~~~V~~~l~~~ga-- 126 (336)
T COG1075 59 KEPIVLVHGLGGGYG--NFLPLDY-RLAILGWLTNGVYAFELSGGDGT--YS-----LAVRGEQLFAYVDEVLAKTGA-- 126 (336)
T ss_pred CceEEEEccCcCCcc--hhhhhhh-hhcchHHHhcccccccccccCCC--cc-----ccccHHHHHHHHHHHHhhcCC--
Confidence 458999999855553 3555554 56666777 888888765222 21 12233445555544 444554
Q ss_pred ccEEEEEechhhHHHhhhhhhcc--CcccceeeecCCCcc
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHLT--HRMHKIIGIDPARPL 138 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~~--~~v~~i~~LdPa~p~ 138 (247)
+++.||||||||.++.++...++ .+|.+++.|.++..+
T Consensus 127 ~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 127 KKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred CceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 89999999999999999999988 789999999877554
No 113
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.19 E-value=2.1e-06 Score=77.48 Aligned_cols=105 Identities=14% Similarity=0.214 Sum_probs=65.1
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHc-CCCCccE
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHH-GASAYDI 103 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~-~~~~~~i 103 (247)
.|+||+ -|-.++...+++..+.+ ++...|++++++|-++.+.++.+.- ..+.. .....++++|... -+|.++|
T Consensus 190 ~P~VIv-~gGlDs~qeD~~~l~~~-~l~~rGiA~LtvDmPG~G~s~~~~l-~~D~~---~l~~aVLd~L~~~p~VD~~RV 263 (411)
T PF06500_consen 190 YPTVIV-CGGLDSLQEDLYRLFRD-YLAPRGIAMLTVDMPGQGESPKWPL-TQDSS---RLHQAVLDYLASRPWVDHTRV 263 (411)
T ss_dssp EEEEEE-E--TTS-GGGGHHHHHC-CCHHCT-EEEEE--TTSGGGTTT-S--S-CC---HHHHHHHHHHHHSTTEEEEEE
T ss_pred CCEEEE-eCCcchhHHHHHHHHHH-HHHhCCCEEEEEccCCCcccccCCC-CcCHH---HHHHHHHHHHhcCCccChhhe
Confidence 355555 45455554444444444 6666789999999999886643321 12222 3345566666543 4677899
Q ss_pred EEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 104 HCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 104 ~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
.++|.|+||.+|..+|...+.||+.++.+.|.
T Consensus 264 ~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~ 295 (411)
T PF06500_consen 264 GAWGFSFGGYYAVRLAALEDPRLKAVVALGAP 295 (411)
T ss_dssp EEEEETHHHHHHHHHHHHTTTT-SEEEEES--
T ss_pred EEEEeccchHHHHHHHHhcccceeeEeeeCch
Confidence 99999999999999998878899999999875
No 114
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.19 E-value=1.2e-05 Score=65.05 Aligned_cols=110 Identities=15% Similarity=0.192 Sum_probs=74.7
Q ss_pred CCCCCeEEEEeC---CCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCC-ChHHHhhcHHHHHHHHHHHHHHHHHcC
Q psy16575 22 DPHKRNVIIIHG---FNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFP-CYLSSLSNTRLVAQCAAQFYSHLTHHG 97 (247)
Q Consensus 22 ~~~~~~vv~iHG---~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~-~y~~~~~~~~~v~~~l~~~i~~l~~~~ 97 (247)
.+..|..|+.|= +.++.++.....++. .|.+.|+.++.+|+|+.+++. .+........ +.+..++++.+..
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~-~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~----Da~aaldW~~~~h 99 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLAR-ALVKRGFATLRFNFRGVGRSQGEFDNGIGELE----DAAAALDWLQARH 99 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHH-HHHhCCceEEeecccccccccCcccCCcchHH----HHHHHHHHHHhhC
Confidence 355788999997 566666555666665 566678999999999977663 2322333333 4555667776554
Q ss_pred CCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 98 ASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 98 ~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
-+.....|.|+|.||.|++.++.+.++...-|..+.|.+
T Consensus 100 p~s~~~~l~GfSFGa~Ia~~la~r~~e~~~~is~~p~~~ 138 (210)
T COG2945 100 PDSASCWLAGFSFGAYIAMQLAMRRPEILVFISILPPIN 138 (210)
T ss_pred CCchhhhhcccchHHHHHHHHHHhcccccceeeccCCCC
Confidence 433445899999999999999999876444444444443
No 115
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.19 E-value=7.7e-06 Score=76.20 Aligned_cols=107 Identities=16% Similarity=0.089 Sum_probs=63.6
Q ss_pred CCCCeEEEEeCC---CCCCCCChHHHHHHHHHhcCC-cEEEEEcCCCCCCC----CCh-HHHhhcHHHHHHHHHHHHHHH
Q psy16575 23 PHKRNVIIIHGF---NQSESQSPMTIIRDAYIRRRD-YNVFMLDFADLAPF----PCY-LSSLSNTRLVAQCAAQFYSHL 93 (247)
Q Consensus 23 ~~~~~vv~iHG~---~~~~~~~~~~~l~~~~l~~~~-~~Vi~vD~~~~~~~----~~y-~~~~~~~~~v~~~l~~~i~~l 93 (247)
...|++|+|||- .++...... ..+..+.+ +.|+.++||-.... ... .....-..++...+.++-+.+
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~~~----~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i 168 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLYPG----DGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNI 168 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCCCh----HHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHH
Confidence 457999999992 222221112 22444444 99999999943211 000 000111344445555555556
Q ss_pred HHcCCCCccEEEEEechhhHHHhhhhhhc--cCcccceeeec
Q psy16575 94 THHGASAYDIHCVGHSLGAHICGMMSNHL--THRMHKIIGID 133 (247)
Q Consensus 94 ~~~~~~~~~i~liGhSlGg~va~~~a~~~--~~~v~~i~~Ld 133 (247)
.++|.++++|+|+|+|.||+.+..+.... ++.+.+++.+.
T Consensus 169 ~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~s 210 (493)
T cd00312 169 AAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQS 210 (493)
T ss_pred HHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhc
Confidence 77888999999999999999997766542 23455555543
No 116
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.09 E-value=1.9e-05 Score=81.47 Aligned_cols=102 Identities=11% Similarity=0.127 Sum_probs=71.9
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEE
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIH 104 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~ 104 (247)
.++++++||+.++. ..|..+.+ .|.. ++.|+.+|.++.+... ......+.++..+...+..+ . ...+++
T Consensus 1068 ~~~l~~lh~~~g~~--~~~~~l~~-~l~~-~~~v~~~~~~g~~~~~---~~~~~l~~la~~~~~~i~~~---~-~~~p~~ 1136 (1296)
T PRK10252 1068 GPTLFCFHPASGFA--WQFSVLSR-YLDP-QWSIYGIQSPRPDGPM---QTATSLDEVCEAHLATLLEQ---Q-PHGPYH 1136 (1296)
T ss_pred CCCeEEecCCCCch--HHHHHHHH-hcCC-CCcEEEEECCCCCCCC---CCCCCHHHHHHHHHHHHHhh---C-CCCCEE
Confidence 47899999999887 34666665 5554 5999999999876431 12234555555555555432 1 124799
Q ss_pred EEEechhhHHHhhhhhhc---cCcccceeeecCCCc
Q psy16575 105 CVGHSLGAHICGMMSNHL---THRMHKIIGIDPARP 137 (247)
Q Consensus 105 liGhSlGg~va~~~a~~~---~~~v~~i~~LdPa~p 137 (247)
++||||||.+|..++.++ +.++..++.+|+..+
T Consensus 1137 l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~~ 1172 (1296)
T PRK10252 1137 LLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWPP 1172 (1296)
T ss_pred EEEechhhHHHHHHHHHHHHcCCceeEEEEecCCCc
Confidence 999999999999998865 567888888886533
No 117
>KOG2624|consensus
Probab=98.08 E-value=7.8e-06 Score=74.01 Aligned_cols=126 Identities=15% Similarity=0.147 Sum_probs=79.1
Q ss_pred CCCceEEecCCCCccccCCCCCCCCeEEEEeCCCCCCCCChH-----HHHHHHHHhcCCcEEEEEcCCCCCCCC---ChH
Q psy16575 2 HGTKTRINILKSNSLKYAGWDPHKRNVIIIHGFNQSESQSPM-----TIIRDAYIRRRDYNVFMLDFADLAPFP---CYL 73 (247)
Q Consensus 2 ~~~g~~i~~~~~~~l~~s~~~~~~~~vv~iHG~~~~~~~~~~-----~~l~~~~l~~~~~~Vi~vD~~~~~~~~---~y~ 73 (247)
|.||..+.+.-... +. ..+|+|++.||...+... |. ..++- .|...||.|-+-+-|+..-+. .+.
T Consensus 55 T~DgYiL~lhRIp~---~~--~~rp~Vll~HGLl~sS~~-Wv~n~p~~sLaf-~LadaGYDVWLgN~RGn~ySr~h~~l~ 127 (403)
T KOG2624|consen 55 TEDGYILTLHRIPR---GK--KKRPVVLLQHGLLASSSS-WVLNGPEQSLAF-LLADAGYDVWLGNNRGNTYSRKHKKLS 127 (403)
T ss_pred ccCCeEEEEeeecC---CC--CCCCcEEEeecccccccc-ceecCccccHHH-HHHHcCCceeeecCcCcccchhhcccC
Confidence 55666444332211 12 678999999998777653 32 23333 466678999999988732110 010
Q ss_pred HH-h-----hcHHH-HHHHHHHHHHHH-HHcCCCCccEEEEEechhhHHHhhhhhhc---cCcccceeeecCCC
Q psy16575 74 SS-L-----SNTRL-VAQCAAQFYSHL-THHGASAYDIHCVGHSLGAHICGMMSNHL---THRMHKIIGIDPAR 136 (247)
Q Consensus 74 ~~-~-----~~~~~-v~~~l~~~i~~l-~~~~~~~~~i~liGhSlGg~va~~~a~~~---~~~v~~i~~LdPa~ 136 (247)
.. . -...+ ...+|-.+|+.+ ...+. ++++.||||+|..+...+.... .++|+...+|.|+.
T Consensus 128 ~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~--~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 128 PSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQ--EKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred CcCCcceeecchhhhhhcCHHHHHHHHHHhccc--cceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 00 0 01122 334777888884 44543 8999999999998885555443 35899999999986
No 118
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.06 E-value=2.3e-05 Score=68.71 Aligned_cols=94 Identities=16% Similarity=0.229 Sum_probs=67.2
Q ss_pred CCCeEEEEeCCCCCCCCChH-----HHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHH--Hc
Q psy16575 24 HKRNVIIIHGFNQSESQSPM-----TIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLT--HH 96 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~-----~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~--~~ 96 (247)
....+++.-|-.+..+...+ ..+.+ +.+..+.||++++||+.+.+.... +.+.+..+-...+++|. ..
T Consensus 136 ~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~-~ak~~~aNvl~fNYpGVg~S~G~~----s~~dLv~~~~a~v~yL~d~~~ 210 (365)
T PF05677_consen 136 PQRWILVSNGNGECYENRAMLDYKDDWIQR-FAKELGANVLVFNYPGVGSSTGPP----SRKDLVKDYQACVRYLRDEEQ 210 (365)
T ss_pred CCcEEEEEcCChHHhhhhhhhccccHHHHH-HHHHcCCcEEEECCCccccCCCCC----CHHHHHHHHHHHHHHHHhccc
Confidence 45688988885554432111 12332 555678999999999988774333 34666677777788876 36
Q ss_pred CCCCccEEEEEechhhHHHhhhhhhc
Q psy16575 97 GASAYDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 97 ~~~~~~i~liGhSlGg~va~~~a~~~ 122 (247)
|+.+++|.+-||||||.|++.+.+..
T Consensus 211 G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 211 GPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CCChheEEEeeccccHHHHHHHHHhc
Confidence 78889999999999999998877653
No 119
>KOG2984|consensus
Probab=98.05 E-value=1.2e-05 Score=65.65 Aligned_cols=110 Identities=9% Similarity=0.014 Sum_probs=81.3
Q ss_pred CCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCc
Q psy16575 22 DPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAY 101 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~ 101 (247)
......|+++.|-.++...+|-.++.+ +....-+.|+++|=++++.+- .+.-...++...++....++.++.+. .+
T Consensus 39 G~G~~~iLlipGalGs~~tDf~pql~~-l~k~l~~TivawDPpGYG~Sr-PP~Rkf~~~ff~~Da~~avdLM~aLk--~~ 114 (277)
T KOG2984|consen 39 GHGPNYILLIPGALGSYKTDFPPQLLS-LFKPLQVTIVAWDPPGYGTSR-PPERKFEVQFFMKDAEYAVDLMEALK--LE 114 (277)
T ss_pred CCCCceeEecccccccccccCCHHHHh-cCCCCceEEEEECCCCCCCCC-CCcccchHHHHHHhHHHHHHHHHHhC--CC
Confidence 334457999999888887778777775 545444999999999988762 22333344555555555666666554 48
Q ss_pred cEEEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 102 DIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 102 ~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
++.++|+|-||..|..+|.+.+++|.|++-...+
T Consensus 115 ~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ 148 (277)
T KOG2984|consen 115 PFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAA 148 (277)
T ss_pred CeeEeeecCCCeEEEEeeccChhhhhhheeeccc
Confidence 9999999999999999999999999998766544
No 120
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.05 E-value=4.7e-05 Score=69.57 Aligned_cols=111 Identities=14% Similarity=0.076 Sum_probs=65.2
Q ss_pred CCCCeEEEEeC--CCCCCCCChHHHHHHHHHhcCC---cEEEEEcCCCC-CCCCChHHHhhcHHHHHHHHHHHHHHHHHc
Q psy16575 23 PHKRNVIIIHG--FNQSESQSPMTIIRDAYIRRRD---YNVFMLDFADL-APFPCYLSSLSNTRLVAQCAAQFYSHLTHH 96 (247)
Q Consensus 23 ~~~~~vv~iHG--~~~~~~~~~~~~l~~~~l~~~~---~~Vi~vD~~~~-~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~ 96 (247)
...|+++++|| |.... . ...+.+.+.+++. .-|+.+|-... .+...+.......+.+.+.|..+|+..-..
T Consensus 207 ~~~PvlyllDG~~w~~~~--~-~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~ 283 (411)
T PRK10439 207 EERPLAILLDGQFWAESM--P-VWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAPF 283 (411)
T ss_pred CCCCEEEEEECHHhhhcC--C-HHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCCC
Confidence 45689999999 33322 2 3334444555443 34677774321 111112111112223333333333321112
Q ss_pred CCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 97 GASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 97 ~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
..+.++..|+|+||||..|.+++...|++++.++.+.|+.
T Consensus 284 ~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 284 SDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred CCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 3356789999999999999999999999999999998873
No 121
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=97.98 E-value=0.00013 Score=57.49 Aligned_cols=104 Identities=21% Similarity=0.309 Sum_probs=69.5
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCC------CChHHHhhcHHHHHHHHHHHHHHHHHc
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPF------PCYLSSLSNTRLVAQCAAQFYSHLTHH 96 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~------~~y~~~~~~~~~v~~~l~~~i~~l~~~ 96 (247)
+..-+||+.||-..+.++..+..++. .+.+.|+.|..+.++..... |...+...+-.. ...+++ |.+.
T Consensus 12 ~~~~tilLaHGAGasmdSt~m~~~a~-~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~-~~~~aq----l~~~ 85 (213)
T COG3571 12 PAPVTILLAHGAGASMDSTSMTAVAA-ALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEY-IVAIAQ----LRAG 85 (213)
T ss_pred CCCEEEEEecCCCCCCCCHHHHHHHH-HHHhCceeEEEeecchhhhccccCCCCcCccccCCHHH-HHHHHH----HHhc
Confidence 33448999999999998888888887 55666899999998764322 111111122221 122222 2222
Q ss_pred CCCCccEEEEEechhhHHHhhhhhhccCcccceeeec
Q psy16575 97 GASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGID 133 (247)
Q Consensus 97 ~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~Ld 133 (247)
....++.+=||||||.++.+++..+...|..++.|.
T Consensus 86 -l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clg 121 (213)
T COG3571 86 -LAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLG 121 (213)
T ss_pred -ccCCceeeccccccchHHHHHHHhhcCCcceEEEec
Confidence 223479999999999999999988877788888774
No 122
>PRK10115 protease 2; Provisional
Probab=97.97 E-value=6.3e-05 Score=73.07 Aligned_cols=112 Identities=13% Similarity=0.097 Sum_probs=73.1
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCC-hHHHhhcH--HHHHHHHHHHHHHHHHcC-C
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPC-YLSSLSNT--RLVAQCAAQFYSHLTHHG-A 98 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~-y~~~~~~~--~~v~~~l~~~i~~l~~~~-~ 98 (247)
..+|++|++||-.+......+......++. .||.|+.++.||.+.... +..+.... ...-+++...+++|.+.+ +
T Consensus 443 ~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~-rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~ 521 (686)
T PRK10115 443 GHNPLLVYGYGSYGASIDADFSFSRLSLLD-RGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYG 521 (686)
T ss_pred CCCCEEEEEECCCCCCCCCCccHHHHHHHH-CCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCC
Confidence 456999999995444432233333343555 579999999999775521 11110000 012234455556666555 5
Q ss_pred CCccEEEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 99 SAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 99 ~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
+++++.+.|-|.||.+++.+..+.|++.+.++...|.
T Consensus 522 d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~ 558 (686)
T PRK10115 522 SPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPF 558 (686)
T ss_pred ChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCc
Confidence 7899999999999999999998888888777765544
No 123
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.96 E-value=7e-05 Score=66.14 Aligned_cols=111 Identities=11% Similarity=0.100 Sum_probs=73.3
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHH-HHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHH----------HHHHHHHHHHH
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTII-RDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTR----------LVAQCAAQFYS 91 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l-~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~----------~v~~~l~~~i~ 91 (247)
+.+|.+|.+.|-++.... .-..+ +..+++. |+..+++.-+.++....-.+...... ..-.....++.
T Consensus 90 ~~rp~~IhLagTGDh~f~-rR~~l~a~pLl~~-gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~ 167 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFW-RRRRLMARPLLKE-GIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLH 167 (348)
T ss_pred CCCceEEEecCCCccchh-hhhhhhhhHHHHc-CcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHH
Confidence 457889999997665522 12233 6667776 79999998666553311111111111 11223455667
Q ss_pred HHHHcCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCCc
Q psy16575 92 HLTHHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARP 137 (247)
Q Consensus 92 ~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p 137 (247)
++.+.|. .++-|.|.||||++|.+++...|..+.-+-.|.+..+
T Consensus 168 Wl~~~G~--~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sA 211 (348)
T PF09752_consen 168 WLEREGY--GPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSA 211 (348)
T ss_pred HHHhcCC--CceEEEEechhHhhHHhhhhcCCCceeEEEeecccCC
Confidence 7776666 6999999999999999999999988877767776543
No 124
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.91 E-value=7.8e-05 Score=64.15 Aligned_cols=108 Identities=15% Similarity=0.132 Sum_probs=70.7
Q ss_pred CCCCCeEEEEeCCCCCCCCChHHHHH--HHHHhcCCcEEEEEc-----CCCC--CCCCChHHHhhcHHHHHHHHHHHHHH
Q psy16575 22 DPHKRNVIIIHGFNQSESQSPMTIIR--DAYIRRRDYNVFMLD-----FADL--APFPCYLSSLSNTRLVAQCAAQFYSH 92 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~~~~~~~l~--~~~l~~~~~~Vi~vD-----~~~~--~~~~~y~~~~~~~~~v~~~l~~~i~~ 92 (247)
..+.|++|++||-.++... +.... +++..+.|+-|+.+| |... .....+........+|+ .|.+++..
T Consensus 58 ~~~apLvv~LHG~~~sgag--~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVg-flr~lva~ 134 (312)
T COG3509 58 PSGAPLVVVLHGSGGSGAG--QLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVG-FLRALVAK 134 (312)
T ss_pred CCCCCEEEEEecCCCChHH--hhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCccHHH-HHHHHHHH
Confidence 3456899999998887632 22221 345667889999996 3211 11111111123344443 56666666
Q ss_pred H-HHcCCCCccEEEEEechhhHHHhhhhhhccCcccceeee
Q psy16575 93 L-THHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGI 132 (247)
Q Consensus 93 l-~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~L 132 (247)
| .+.++++++|++.|.|-||.++..++...|+....|..+
T Consensus 135 l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~V 175 (312)
T COG3509 135 LVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPV 175 (312)
T ss_pred HHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeee
Confidence 5 578999999999999999999999998888765554433
No 125
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.91 E-value=8.4e-05 Score=62.58 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=62.7
Q ss_pred eEEEEeCCCCCCCCChHHHHHHHHHhcC----CcEEEEEcCCC----------CCCCC----ChHHHhhcHHHHHHHHHH
Q psy16575 27 NVIIIHGFNQSESQSPMTIIRDAYIRRR----DYNVFMLDFAD----------LAPFP----CYLSSLSNTRLVAQCAAQ 88 (247)
Q Consensus 27 ~vv~iHG~~~~~~~~~~~~l~~~~l~~~----~~~Vi~vD~~~----------~~~~~----~y~~~~~~~~~v~~~l~~ 88 (247)
+.|||||+.++.++ ...|++.++.++ .--++.+|-.+ .+..| ...............+..
T Consensus 47 PTIfIhGsgG~asS--~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 47 PTIFIHGSGGTASS--LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred ceEEEecCCCChhH--HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 68899999999854 666776666543 23455555332 12111 011111222333556666
Q ss_pred HHHHHH-HcCCCCccEEEEEechhhHHHhhhhhhcc-----Ccccceeeec
Q psy16575 89 FYSHLT-HHGASAYDIHCVGHSLGAHICGMMSNHLT-----HRMHKIIGID 133 (247)
Q Consensus 89 ~i~~l~-~~~~~~~~i~liGhSlGg~va~~~a~~~~-----~~v~~i~~Ld 133 (247)
.+..|. ++++ +++.+|||||||.-..++...+. ..+.+++.|+
T Consensus 125 ~msyL~~~Y~i--~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~ 173 (288)
T COG4814 125 AMSYLQKHYNI--PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLA 173 (288)
T ss_pred HHHHHHHhcCC--ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEec
Confidence 666665 4554 79999999999987766555432 2578888884
No 126
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.90 E-value=5.6e-05 Score=62.91 Aligned_cols=111 Identities=13% Similarity=0.132 Sum_probs=68.4
Q ss_pred EecCCCCccccCCCCC--CCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHh---h-cHHH
Q psy16575 8 INILKSNSLKYAGWDP--HKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSL---S-NTRL 81 (247)
Q Consensus 8 i~~~~~~~l~~s~~~~--~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~---~-~~~~ 81 (247)
|...|.-++....|.. +.+-.+++-|-++-.. .+++.++. ++.+.||.|+++|||+.+++. ..... . ...-
T Consensus 10 l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~-~fYRrfA~-~a~~~Gf~Vlt~dyRG~g~S~-p~~~~~~~~~~~Dw 86 (281)
T COG4757 10 LPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQ-YFYRRFAA-AAAKAGFEVLTFDYRGIGQSR-PASLSGSQWRYLDW 86 (281)
T ss_pred cccCCCccCccccccCCCCCCCcEEecccCCcch-hHhHHHHH-HhhccCceEEEEecccccCCC-ccccccCccchhhh
Confidence 3444444454444532 2333566666555554 36778886 777889999999999987662 11111 1 1222
Q ss_pred HHHHHHHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhc
Q psy16575 82 VAQCAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 82 v~~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~ 122 (247)
...++...++.+.+. .+--+...||||+|||+.+.+++.-
T Consensus 87 A~~D~~aal~~~~~~-~~~~P~y~vgHS~GGqa~gL~~~~~ 126 (281)
T COG4757 87 ARLDFPAALAALKKA-LPGHPLYFVGHSFGGQALGLLGQHP 126 (281)
T ss_pred hhcchHHHHHHHHhh-CCCCceEEeeccccceeecccccCc
Confidence 234555555555431 1335799999999999999988764
No 127
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=97.89 E-value=5.1e-05 Score=69.78 Aligned_cols=86 Identities=8% Similarity=0.038 Sum_probs=55.4
Q ss_pred hHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHH-HcCCCCccEEEEEechhhHHHhhhhh
Q psy16575 42 PMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLT-HHGASAYDIHCVGHSLGAHICGMMSN 120 (247)
Q Consensus 42 ~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~-~~~~~~~~i~liGhSlGg~va~~~a~ 120 (247)
.+..+.+ .|++.||.+ ..|..+.+-...+ ........+.++++++.+. +.+. ++++||||||||.++.+++.
T Consensus 109 ~~~~li~-~L~~~GY~~-~~dL~g~gYDwR~---~~~~~~~~~~Lk~lIe~~~~~~g~--~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 109 YFHDMIE-QLIKWGYKE-GKTLFGFGYDFRQ---SNRLPETMDGLKKKLETVYKASGG--KKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred HHHHHHH-HHHHcCCcc-CCCcccCCCCccc---cccHHHHHHHHHHHHHHHHHHcCC--CCEEEEEECHhHHHHHHHHH
Confidence 4667776 566667755 5676665533111 1112333456777777654 3443 79999999999999987776
Q ss_pred hccC----cccceeeecC
Q psy16575 121 HLTH----RMHKIIGIDP 134 (247)
Q Consensus 121 ~~~~----~v~~i~~LdP 134 (247)
..++ .|++++.|.+
T Consensus 182 ~~p~~~~k~I~~~I~la~ 199 (440)
T PLN02733 182 LHSDVFEKYVNSWIAIAA 199 (440)
T ss_pred HCCHhHHhHhccEEEECC
Confidence 6553 4788888854
No 128
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.84 E-value=0.00042 Score=61.00 Aligned_cols=114 Identities=14% Similarity=0.176 Sum_probs=77.3
Q ss_pred CCCCeEEEEeCCCCCCCC-ChHHHHHHHHHhcCCcEEEEEcCCCCCC--CCC---------------h------------
Q psy16575 23 PHKRNVIIIHGFNQSESQ-SPMTIIRDAYIRRRDYNVFMLDFADLAP--FPC---------------Y------------ 72 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~-~~~~~l~~~~l~~~~~~Vi~vD~~~~~~--~~~---------------y------------ 72 (247)
..+..||++||+..+.+. .....|+. .|...|+.++++..+.-.. .+. .
T Consensus 85 ~~~G~vIilp~~g~~~d~p~~i~~LR~-~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 163 (310)
T PF12048_consen 85 KPQGAVIILPDWGEHPDWPGLIAPLRR-ELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASA 163 (310)
T ss_pred CCceEEEEecCCCCCCCcHhHHHHHHH-HhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccc
Confidence 345699999999999864 34556665 6677889999987765110 000 0
Q ss_pred ---HHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhh-ccCcccceeeecCCCccc
Q psy16575 73 ---LSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNH-LTHRMHKIIGIDPARPLV 139 (247)
Q Consensus 73 ---~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~-~~~~v~~i~~LdPa~p~f 139 (247)
.........+...+...+.++.+.+. +++.||||+.||..+..+... -...+..+|.++|-.|.-
T Consensus 164 ~~~~~~~~~~~~~~ari~Aa~~~~~~~~~--~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~ 232 (310)
T PF12048_consen 164 QEAEAREAYEERLFARIEAAIAFAQQQGG--KNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQP 232 (310)
T ss_pred cHhHHhHHHHHHHHHHHHHHHHHHHhcCC--ceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcc
Confidence 01112234566677777777777664 679999999999888555444 445688999999887653
No 129
>KOG2112|consensus
Probab=97.84 E-value=0.00014 Score=59.55 Aligned_cols=110 Identities=14% Similarity=0.109 Sum_probs=77.0
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCC-------CC----------CCChHHHhhcHHHHHHHHH
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADL-------AP----------FPCYLSSLSNTRLVAQCAA 87 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~-------~~----------~~~y~~~~~~~~~v~~~l~ 87 (247)
+.+||++||..++... |.+.+.+ +.-.+...|.+.-+.. .. ++.-..........+..+.
T Consensus 3 ~atIi~LHglGDsg~~-~~~~~~~--l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~ 79 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSG-WAQFLKQ--LPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIA 79 (206)
T ss_pred eEEEEEEecCCCCCcc-HHHHHHc--CCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHH
Confidence 4689999999988864 5444433 4545577777632210 00 0011113334566677888
Q ss_pred HHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCCc
Q psy16575 88 QFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARP 137 (247)
Q Consensus 88 ~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p 137 (247)
.+++...+.|++.++|.+-|+|+||.+|.+++..++..+..+.++-+-.|
T Consensus 80 ~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p 129 (206)
T KOG2112|consen 80 NLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLP 129 (206)
T ss_pred HHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccc
Confidence 88888778899999999999999999999999999888888877765555
No 130
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.83 E-value=2.2e-05 Score=66.31 Aligned_cols=48 Identities=13% Similarity=0.124 Sum_probs=38.5
Q ss_pred HHHHHHH-HcCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 88 QFYSHLT-HHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 88 ~~i~~l~-~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
+++..++ +..+..++..|+|+||||..|.+++.+.|+.++.++++.|+
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 4444444 45554444899999999999999999999999999999876
No 131
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=97.77 E-value=0.00015 Score=64.04 Aligned_cols=110 Identities=16% Similarity=0.173 Sum_probs=63.0
Q ss_pred CCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCC-CCC-----------h-HHHhhc------HHHH
Q psy16575 22 DPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAP-FPC-----------Y-LSSLSN------TRLV 82 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~-~~~-----------y-~~~~~~------~~~v 82 (247)
....|.||..||+++... .+... .. + ...|+.|+.+|.++.+. ++. + .....+ .+.+
T Consensus 80 ~~~~Pavv~~hGyg~~~~-~~~~~-~~-~-a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~ 155 (320)
T PF05448_consen 80 KGKLPAVVQFHGYGGRSG-DPFDL-LP-W-AAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRV 155 (320)
T ss_dssp SSSEEEEEEE--TT--GG-GHHHH-HH-H-HHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHH
T ss_pred CCCcCEEEEecCCCCCCC-Ccccc-cc-c-ccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHH
Confidence 345689999999988753 24333 22 4 44579999999998661 111 1 011111 2233
Q ss_pred HHHHHHHHHHHHHc-CCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 83 AQCAAQFYSHLTHH-GASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 83 ~~~l~~~i~~l~~~-~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
-.+.-..++.|... .++.++|.+.|.|+||.++..++..- .+|++++..-|+.
T Consensus 156 ~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd-~rv~~~~~~vP~l 209 (320)
T PF05448_consen 156 YLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALD-PRVKAAAADVPFL 209 (320)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHS-ST-SEEEEESESS
T ss_pred HHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhC-ccccEEEecCCCc
Confidence 33444455555543 46778999999999999998888754 5677777776654
No 132
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.74 E-value=0.0001 Score=58.84 Aligned_cols=93 Identities=15% Similarity=0.210 Sum_probs=58.0
Q ss_pred CeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEE
Q psy16575 26 RNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHC 105 (247)
Q Consensus 26 ~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~l 105 (247)
+.+|+|||+.++....|..... .+. -++-.++...-. .....+-++.+.+.+... .+.++|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we----~~l-~~a~rveq~~w~-----------~P~~~dWi~~l~~~v~a~---~~~~vl 63 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWE----SAL-PNARRVEQDDWE-----------APVLDDWIARLEKEVNAA---EGPVVL 63 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHH----hhC-ccchhcccCCCC-----------CCCHHHHHHHHHHHHhcc---CCCeEE
Confidence 5799999999998665654432 221 232223222111 112223333333333322 356999
Q ss_pred EEechhhHHHhhhhhhccCcccceeeecCCCc
Q psy16575 106 VGHSLGAHICGMMSNHLTHRMHKIIGIDPARP 137 (247)
Q Consensus 106 iGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p 137 (247)
|+||||..++..++.....+|..+..+.|+-+
T Consensus 64 VAHSLGc~~v~h~~~~~~~~V~GalLVAppd~ 95 (181)
T COG3545 64 VAHSLGCATVAHWAEHIQRQVAGALLVAPPDV 95 (181)
T ss_pred EEecccHHHHHHHHHhhhhccceEEEecCCCc
Confidence 99999999999988888788999988887753
No 133
>KOG3101|consensus
Probab=97.72 E-value=5.8e-05 Score=61.98 Aligned_cols=111 Identities=11% Similarity=0.095 Sum_probs=69.1
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCC-------C-------CChHHHhh-----cHHHHHHH
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAP-------F-------PCYLSSLS-----NTRLVAQC 85 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~-------~-------~~y~~~~~-----~~~~v~~~ 85 (247)
-|+++++-|.+..........-.+....+.|..|+.+|-+..+. + .-|..+.. +-+--.-.
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 48999999999887542222222334556789999998654321 0 01221111 11111122
Q ss_pred HHHHHHHHHH--cCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 86 AAQFYSHLTH--HGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 86 l~~~i~~l~~--~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
+.++.+.+.. ..+++.++.+.|||||||=|...+.+-+.+.+.+.+..|-
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI 175 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPI 175 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccc
Confidence 3334444442 3456778999999999999988888878888899888874
No 134
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=97.72 E-value=0.00036 Score=60.71 Aligned_cols=107 Identities=13% Similarity=0.149 Sum_probs=63.2
Q ss_pred CCCeEEEEeCCCCCCCC-ChHHHHHHHHHhcCCcEEEEEcCCC-CCCCCChHHHhhcHHHHHHHHHHHHHHHHHc--C-C
Q psy16575 24 HKRNVIIIHGFNQSESQ-SPMTIIRDAYIRRRDYNVFMLDFAD-LAPFPCYLSSLSNTRLVAQCAAQFYSHLTHH--G-A 98 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~-~~~~~l~~~~l~~~~~~Vi~vD~~~-~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~--~-~ 98 (247)
.+..||||-|.++..-. .+...|++ .|...+|.|+-+-+++ +... .+. ....=.++|++++++|+.. | .
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~-aL~~~~wsl~q~~LsSSy~G~-G~~----SL~~D~~eI~~~v~ylr~~~~g~~ 105 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAE-ALEETGWSLFQVQLSSSYSGW-GTS----SLDRDVEEIAQLVEYLRSEKGGHF 105 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHH-HHT-TT-EEEEE--GGGBTTS--S------HHHHHHHHHHHHHHHHHHS----
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHH-HhccCCeEEEEEEecCccCCc-Ccc----hhhhHHHHHHHHHHHHHHhhcccc
Confidence 45689999998876543 56788887 5676789999998876 2222 122 2333345777778877654 1 2
Q ss_pred CCccEEEEEechhhHHHhhhhhhcc-----CcccceeeecCCC
Q psy16575 99 SAYDIHCVGHSLGAHICGMMSNHLT-----HRMHKIIGIDPAR 136 (247)
Q Consensus 99 ~~~~i~liGhSlGg~va~~~a~~~~-----~~v~~i~~LdPa~ 136 (247)
..++|+|+|||-|.+-+.++..... .+|.++|.-.|..
T Consensus 106 ~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVS 148 (303)
T PF08538_consen 106 GREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVS 148 (303)
T ss_dssp --S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE--
T ss_pred CCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCC
Confidence 4589999999999999977766542 5688888776653
No 135
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=97.72 E-value=7.5e-05 Score=66.14 Aligned_cols=108 Identities=17% Similarity=0.139 Sum_probs=68.9
Q ss_pred CCeEEEEeCCCCCCCC---------ChHHHHHHH--HHhcCCcEEEEEcCCCCC-CC--C-----C---hHHHhhcHHHH
Q psy16575 25 KRNVIIIHGFNQSESQ---------SPMTIIRDA--YIRRRDYNVFMLDFADLA-PF--P-----C---YLSSLSNTRLV 82 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~---------~~~~~l~~~--~l~~~~~~Vi~vD~~~~~-~~--~-----~---y~~~~~~~~~v 82 (247)
...|+++|+++++... .||..+.-. -+.-..|-||++|--+.. .+ | . |.... -.-.|
T Consensus 51 ~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~F-P~~ti 129 (368)
T COG2021 51 DNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDF-PVITI 129 (368)
T ss_pred CceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCC-CcccH
Confidence 4589999999995421 278776532 233446999999965432 11 1 0 11100 11122
Q ss_pred HHHHHHHHHHHHHcCCCCccEE-EEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 83 AQCAAQFYSHLTHHGASAYDIH-CVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 83 ~~~l~~~i~~l~~~~~~~~~i~-liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
.+.+......+..+|+ +++. +||-||||..|...+..+|++|.+++.|..+
T Consensus 130 ~D~V~aq~~ll~~LGI--~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~ 181 (368)
T COG2021 130 RDMVRAQRLLLDALGI--KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATA 181 (368)
T ss_pred HHHHHHHHHHHHhcCc--ceEeeeeccChHHHHHHHHHHhChHHHhhhheeccc
Confidence 2233222222456777 7887 9999999999999999999999999988754
No 136
>PLN02606 palmitoyl-protein thioesterase
Probab=97.72 E-value=0.00029 Score=61.27 Aligned_cols=101 Identities=10% Similarity=0.149 Sum_probs=59.1
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHh-cCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccE
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIR-RRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDI 103 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~-~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i 103 (247)
..+||+.||.+++....-+..+.+ +++ ..++.+..+-... +....+ ...+.+++..+-+.+.+...-.+-+
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~-~i~~~~~~pg~~v~ig~-~~~~s~------~~~~~~Qv~~vce~l~~~~~L~~G~ 97 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQ-FLINHSGYPGTCVEIGN-GVQDSL------FMPLRQQASIACEKIKQMKELSEGY 97 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHH-HHHhCCCCCeEEEEECC-Cccccc------ccCHHHHHHHHHHHHhcchhhcCce
Confidence 457999999987776556777776 555 2345444443221 110012 1112233333333332211112469
Q ss_pred EEEEechhhHHHhhhhhhccC--cccceeeec
Q psy16575 104 HCVGHSLGAHICGMMSNHLTH--RMHKIIGID 133 (247)
Q Consensus 104 ~liGhSlGg~va~~~a~~~~~--~v~~i~~Ld 133 (247)
++||||.||+++..+..+.+. .|..+|.|.
T Consensus 98 naIGfSQGglflRa~ierc~~~p~V~nlISlg 129 (306)
T PLN02606 98 NIVAESQGNLVARGLIEFCDNAPPVINYVSLG 129 (306)
T ss_pred EEEEEcchhHHHHHHHHHCCCCCCcceEEEec
Confidence 999999999999888888765 588888774
No 137
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.67 E-value=0.00014 Score=68.04 Aligned_cols=108 Identities=17% Similarity=0.119 Sum_probs=61.5
Q ss_pred CCCeEEEEeCC--C-CCCCCChHHHHHHHHHhcCCcEEEEEcCCCCC----CCCChHHHh-hc--HHHHHHHHHHHHHHH
Q psy16575 24 HKRNVIIIHGF--N-QSESQSPMTIIRDAYIRRRDYNVFMLDFADLA----PFPCYLSSL-SN--TRLVAQCAAQFYSHL 93 (247)
Q Consensus 24 ~~~~vv~iHG~--~-~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~----~~~~y~~~~-~~--~~~v~~~l~~~i~~l 93 (247)
..|++|+|||- . ++.....+. -. .++..++.-|+.++||-.. ... ..... .| ..+....|.++-+.+
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~-~~-~~~~~~~vivVt~nYRlg~~Gfl~~~-~~~~~~gN~Gl~Dq~~AL~WV~~nI 200 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYD-GA-SLAASKDVIVVTINYRLGAFGFLSLG-DLDAPSGNYGLLDQRLALKWVQDNI 200 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGH-TH-HHHHHHTSEEEEE----HHHHH-BSS-STTSHBSTHHHHHHHHHHHHHHHHG
T ss_pred ccceEEEeecccccCCCccccccc-cc-ccccCCCEEEEEeccccccccccccc-ccccCchhhhhhhhHHHHHHHHhhh
Confidence 46999999992 2 222111222 22 2455668999999999531 110 00111 23 334445566665667
Q ss_pred HHcCCCCccEEEEEechhhHHHhhhhhh--ccCcccceeeecC
Q psy16575 94 THHGASAYDIHCVGHSLGAHICGMMSNH--LTHRMHKIIGIDP 134 (247)
Q Consensus 94 ~~~~~~~~~i~liGhSlGg~va~~~a~~--~~~~v~~i~~LdP 134 (247)
..+|-|+++|+|.|||.||..+...... ..+.+.|.+....
T Consensus 201 ~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 201 AAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp GGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES-
T ss_pred hhcccCCcceeeeeecccccccceeeecccccccccccccccc
Confidence 7889899999999999999888655443 2356778887765
No 138
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.63 E-value=0.00048 Score=59.99 Aligned_cols=101 Identities=14% Similarity=0.148 Sum_probs=62.3
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhc-CCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccE
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRR-RDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDI 103 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~-~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i 103 (247)
..++|+-||.+++....-+..+.+ +++. .|..+.++-....... .|. ..+.+++..+-+.+.+...-.+-+
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~-l~~~~~g~~~~~i~ig~~~~~-s~~------~~~~~Qve~vce~l~~~~~l~~G~ 96 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQ-LLTNLSGSPGFCLEIGNGVGD-SWL------MPLTQQAEIACEKVKQMKELSQGY 96 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHH-HHHhCCCCceEEEEECCCccc-cce------eCHHHHHHHHHHHHhhchhhhCcE
Confidence 347889999999887666667766 4443 4566666654433222 121 112233333333332211112469
Q ss_pred EEEEechhhHHHhhhhhhccC--cccceeeec
Q psy16575 104 HCVGHSLGAHICGMMSNHLTH--RMHKIIGID 133 (247)
Q Consensus 104 ~liGhSlGg~va~~~a~~~~~--~v~~i~~Ld 133 (247)
++||||.||+++..+..+.+. +|..+|.|.
T Consensus 97 naIGfSQGGlflRa~ierc~~~p~V~nlISlg 128 (314)
T PLN02633 97 NIVGRSQGNLVARGLIEFCDGGPPVYNYISLA 128 (314)
T ss_pred EEEEEccchHHHHHHHHHCCCCCCcceEEEec
Confidence 999999999999888888875 688888875
No 139
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.62 E-value=0.00042 Score=62.41 Aligned_cols=123 Identities=11% Similarity=0.151 Sum_probs=76.2
Q ss_pred CceEEecCCCCcccc--CCCC-CCCCeEEEEeCCCCCCCC---ChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhh
Q psy16575 4 TKTRINILKSNSLKY--AGWD-PHKRNVIIIHGFNQSESQ---SPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLS 77 (247)
Q Consensus 4 ~g~~i~~~~~~~l~~--s~~~-~~~~~vv~iHG~~~~~~~---~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~ 77 (247)
.|..+.-++...+.. +.-+ .-++++++||=|.....- .....++. ++.+.|..|++++|+.-... .+..
T Consensus 83 pg~vV~~ndv~~liqy~p~~e~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~-~l~~~g~~vfvIsw~nPd~~----~~~~ 157 (445)
T COG3243 83 PGKVVFRNDVLELIQYKPLTEKVLKRPLLIVPPWINKFYILDLSPEKSLVR-WLLEQGLDVFVISWRNPDAS----LAAK 157 (445)
T ss_pred CceEEEeechhhhhccCCCCCccCCCceEeeccccCceeEEeCCCCccHHH-HHHHcCCceEEEeccCchHh----hhhc
Confidence 344444444444432 2112 245789999998876521 11234443 67777899999999975433 2222
Q ss_pred cH-HHHHHHHHHHHHHHH-HcCCCCccEEEEEechhhHHHhhhhhhccCc-ccceeeec
Q psy16575 78 NT-RLVAQCAAQFYSHLT-HHGASAYDIHCVGHSLGAHICGMMSNHLTHR-MHKIIGID 133 (247)
Q Consensus 78 ~~-~~v~~~l~~~i~~l~-~~~~~~~~i~liGhSlGg~va~~~a~~~~~~-v~~i~~Ld 133 (247)
+. ..+...+.+-++... ..+. ++|+++||+.||.++..+..+++.+ |+.+|.+-
T Consensus 158 ~~edYi~e~l~~aid~v~~itg~--~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lt 214 (445)
T COG3243 158 NLEDYILEGLSEAIDTVKDITGQ--KDINLIGYCVGGTLLAAALALMAAKRIKSLTLLT 214 (445)
T ss_pred cHHHHHHHHHHHHHHHHHHHhCc--cccceeeEecchHHHHHHHHhhhhcccccceeee
Confidence 22 223244444455443 3443 8999999999999998887777765 88888774
No 140
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=97.62 E-value=0.0002 Score=63.56 Aligned_cols=93 Identities=13% Similarity=0.128 Sum_probs=59.1
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCC--CCC-ChHH----HhhcHHHHHHHHHHHHHHHHHc
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLA--PFP-CYLS----SLSNTRLVAQCAAQFYSHLTHH 96 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~--~~~-~y~~----~~~~~~~v~~~l~~~i~~l~~~ 96 (247)
..|+|++-||.+++.+. +..+++ .+...||-|..+|.++.. ..+ .|.. ......+--.++..+|+.|.+.
T Consensus 70 ~~PlvvlshG~Gs~~~~--f~~~A~-~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~ 146 (365)
T COG4188 70 LLPLVVLSHGSGSYVTG--FAWLAE-HLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQL 146 (365)
T ss_pred cCCeEEecCCCCCCccc--hhhhHH-HHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHh
Confidence 57999999998888643 566666 666678999999998732 111 1111 0000111123444444444322
Q ss_pred --------CCCCccEEEEEechhhHHHhhhh
Q psy16575 97 --------GASAYDIHCVGHSLGAHICGMMS 119 (247)
Q Consensus 97 --------~~~~~~i~liGhSlGg~va~~~a 119 (247)
.++..+|-++|||+||+.+++++
T Consensus 147 ~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~la 177 (365)
T COG4188 147 TASPALAGRLDPQRVGVLGHSFGGYTAMELA 177 (365)
T ss_pred hcCcccccccCccceEEEecccccHHHHHhc
Confidence 35678999999999999987765
No 141
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.62 E-value=0.00027 Score=60.89 Aligned_cols=104 Identities=18% Similarity=0.208 Sum_probs=51.6
Q ss_pred CCeEEEEeCCCCCCCCC-hHHHHHHHHHh--cCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHc-CCCC
Q psy16575 25 KRNVIIIHGFNQSESQS-PMTIIRDAYIR--RRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHH-GASA 100 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~-~~~~l~~~~l~--~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~-~~~~ 100 (247)
..+||+.||.+++.... .+..+.+ +++ ..|..|.+++....... .........+..+++.+-+.+.+. .+ .
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~-~i~~~~PG~yV~si~ig~~~~~---D~~~s~f~~v~~Qv~~vc~~l~~~p~L-~ 79 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKE-LIEEQHPGTYVHSIEIGNDPSE---DVENSFFGNVNDQVEQVCEQLANDPEL-A 79 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHH-HHHHHSTT--EEE--SSSSHHH---HHHHHHHSHHHHHHHHHHHHHHH-GGG-T
T ss_pred CCcEEEEEcCccccCChhHHHHHHH-HHHHhCCCceEEEEEECCCcch---hhhhhHHHHHHHHHHHHHHHHhhChhh-h
Confidence 35799999998875322 3445443 433 25788888886543211 011111233444444444444321 11 1
Q ss_pred ccEEEEEechhhHHHhhhhhhcc-Ccccceeeec
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHLT-HRMHKIIGID 133 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~~-~~v~~i~~Ld 133 (247)
+-+++||||.||.++..+..+.+ ..|..++.|.
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlg 113 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLG 113 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES
T ss_pred cceeeeeeccccHHHHHHHHHCCCCCceeEEEec
Confidence 57999999999999988888875 4688887774
No 142
>KOG3724|consensus
Probab=97.62 E-value=0.00057 Score=65.64 Aligned_cols=110 Identities=18% Similarity=0.176 Sum_probs=63.2
Q ss_pred CCCCCeEEEEeCCCCCCCCChHHHHHHHHH---------------hcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHH
Q psy16575 22 DPHKRNVIIIHGFNQSESQSPMTIIRDAYI---------------RRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCA 86 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l---------------~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l 86 (247)
..+.-+|+||.|-.|+... .+.++..-. ....+..+++|+..--..-.-..-...++.|-+.+
T Consensus 86 elsGIPVLFIPGNAGSyKQ--vRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 86 ELSGIPVLFIPGNAGSYKQ--VRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGHILLDQTEYVNDAI 163 (973)
T ss_pred cCCCceEEEecCCCCchHH--HHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccHhHHHHHHHHHHHH
Confidence 3445689999998888743 444443222 11246788888875211100011222344454444
Q ss_pred HHHHHHHHH-cCC---CCccEEEEEechhhHHHhhhhh---hccCcccceeeec
Q psy16575 87 AQFYSHLTH-HGA---SAYDIHCVGHSLGAHICGMMSN---HLTHRMHKIIGID 133 (247)
Q Consensus 87 ~~~i~~l~~-~~~---~~~~i~liGhSlGg~va~~~a~---~~~~~v~~i~~Ld 133 (247)
.-.++..+. ... .+..|.||||||||.||..+.- ..++-|..|+.+.
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITls 217 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLS 217 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhc
Confidence 444444332 122 2577999999999999966543 3456677777664
No 143
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.58 E-value=0.00032 Score=63.69 Aligned_cols=81 Identities=11% Similarity=0.238 Sum_probs=54.4
Q ss_pred HHHHHHHHHhcCCc----EEEE--EcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEEEEechhhHHHh
Q psy16575 43 MTIIRDAYIRRRDY----NVFM--LDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHCVGHSLGAHICG 116 (247)
Q Consensus 43 ~~~l~~~~l~~~~~----~Vi~--vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~ 116 (247)
+..+++. |.+.|| ++++ +|||.... ........+.++|+.+.+.. .++|+||||||||.++.
T Consensus 67 ~~~li~~-L~~~GY~~~~~l~~~pYDWR~~~~---------~~~~~~~~lk~~ie~~~~~~--~~kv~li~HSmGgl~~~ 134 (389)
T PF02450_consen 67 FAKLIEN-LEKLGYDRGKDLFAAPYDWRLSPA---------ERDEYFTKLKQLIEEAYKKN--GKKVVLIAHSMGGLVAR 134 (389)
T ss_pred HHHHHHH-HHhcCcccCCEEEEEeechhhchh---------hHHHHHHHHHHHHHHHHHhc--CCcEEEEEeCCCchHHH
Confidence 5667764 455444 3333 69996543 12234456777777754433 37999999999999998
Q ss_pred hhhhhcc------CcccceeeecCC
Q psy16575 117 MMSNHLT------HRMHKIIGIDPA 135 (247)
Q Consensus 117 ~~a~~~~------~~v~~i~~LdPa 135 (247)
++.+..+ +.|.+++.|.+.
T Consensus 135 ~fl~~~~~~~W~~~~i~~~i~i~~p 159 (389)
T PF02450_consen 135 YFLQWMPQEEWKDKYIKRFISIGTP 159 (389)
T ss_pred HHHHhccchhhHHhhhhEEEEeCCC
Confidence 8877764 358899998654
No 144
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.56 E-value=0.00063 Score=60.98 Aligned_cols=104 Identities=19% Similarity=0.231 Sum_probs=59.0
Q ss_pred CCCeEEEEeCCCCCCCC--ChHHHHHHHHHhcCCcEEEEEcCCCCC---CCCChHHHhhcHHHHHHHHHHHHHHHH-HcC
Q psy16575 24 HKRNVIIIHGFNQSESQ--SPMTIIRDAYIRRRDYNVFMLDFADLA---PFPCYLSSLSNTRLVAQCAAQFYSHLT-HHG 97 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~--~~~~~l~~~~l~~~~~~Vi~vD~~~~~---~~~~y~~~~~~~~~v~~~l~~~i~~l~-~~~ 97 (247)
+.|++|++||.+=.... .....+..-+-.-.+..++++||.-.. ..-.|+... .++.+..+.|. +.|
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~~~~~~~~yPtQL-------~qlv~~Y~~Lv~~~G 193 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTSSDEHGHKYPTQL-------RQLVATYDYLVESEG 193 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccccccCCCcCchHH-------HHHHHHHHHHHhccC
Confidence 36999999993222111 112222221111125799999999766 322343322 22333344444 455
Q ss_pred CCCccEEEEEechhhHHHhhhhhhccC--c---ccceeeecCCC
Q psy16575 98 ASAYDIHCVGHSLGAHICGMMSNHLTH--R---MHKIIGIDPAR 136 (247)
Q Consensus 98 ~~~~~i~liGhSlGg~va~~~a~~~~~--~---v~~i~~LdPa~ 136 (247)
. ++|+|+|-|.||+++..+.+++.. + -++++++.|--
T Consensus 194 ~--~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv 235 (374)
T PF10340_consen 194 N--KNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWV 235 (374)
T ss_pred C--CeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCc
Confidence 4 799999999999999776665432 1 23566666653
No 145
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.49 E-value=0.0014 Score=52.86 Aligned_cols=114 Identities=15% Similarity=0.170 Sum_probs=72.9
Q ss_pred CCCCeEEEEeCCCCCCCCCh---H---HHHHHHH---H--hcCCcEEEEEcCCCCCCC-CCh--HHHhhcHHHHHHHHHH
Q psy16575 23 PHKRNVIIIHGFNQSESQSP---M---TIIRDAY---I--RRRDYNVFMLDFADLAPF-PCY--LSSLSNTRLVAQCAAQ 88 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~---~---~~l~~~~---l--~~~~~~Vi~vD~~~~~~~-~~y--~~~~~~~~~v~~~l~~ 88 (247)
....+.+++.|...+..... . ..+++.. + ...+-.|-++-|-++... ... .......+.-+..|..
T Consensus 17 ~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~~ 96 (177)
T PF06259_consen 17 TADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLAR 96 (177)
T ss_pred CcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHHH
Confidence 34578999999766654321 1 1122111 1 112346777777765432 111 1122235667788899
Q ss_pred HHHHHHHcCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 89 FYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 89 ~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
|++-|.....+..++++||||.|..+++.+++..+..+..++.+...+
T Consensus 97 f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 97 FLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 998887554455799999999999999999998677888998886443
No 146
>KOG3975|consensus
Probab=97.48 E-value=0.0013 Score=55.38 Aligned_cols=115 Identities=15% Similarity=0.066 Sum_probs=73.4
Q ss_pred CCCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCC--cEEEEEcCCCCCCCCC---hHHH--hhcHHHHHHHHHHHHHHH
Q psy16575 21 WDPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRD--YNVFMLDFADLAPFPC---YLSS--LSNTRLVAQCAAQFYSHL 93 (247)
Q Consensus 21 ~~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~--~~Vi~vD~~~~~~~~~---y~~~--~~~~~~v~~~l~~~i~~l 93 (247)
.+..++.+++|.|-.+.. .++..++.++..... ..|..+-..+++..|. -... ....-.+..++..-++++
T Consensus 25 ~~~~~~li~~IpGNPG~~--gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFi 102 (301)
T KOG3975|consen 25 SGEDKPLIVWIPGNPGLL--GFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFI 102 (301)
T ss_pred CCCCceEEEEecCCCCch--hHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHH
Confidence 346788999999988877 568888876655433 3455555555544331 0011 112233455666666666
Q ss_pred HHcCCCCccEEEEEechhhHHHhhhhhhc--cCcccceeeecCCCc
Q psy16575 94 THHGASAYDIHCVGHSLGAHICGMMSNHL--THRMHKIIGIDPARP 137 (247)
Q Consensus 94 ~~~~~~~~~i~liGhSlGg~va~~~a~~~--~~~v~~i~~LdPa~p 137 (247)
++.--...+++++|||.||.+...+.... ...|.+.++|-|.--
T Consensus 103 k~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIe 148 (301)
T KOG3975|consen 103 KEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIE 148 (301)
T ss_pred HHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHH
Confidence 66544447999999999999997776643 246778888877643
No 147
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=97.42 E-value=0.0019 Score=54.37 Aligned_cols=101 Identities=14% Similarity=0.186 Sum_probs=59.0
Q ss_pred CCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCC-CCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCC
Q psy16575 22 DPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLA-PFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASA 100 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~-~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~ 100 (247)
...+++||+-.||....+ .+..++. ||...|+.|+.+|-..+- .+..- -.......-...+..++++|.+.|.
T Consensus 27 ~~~~~tiliA~Gf~rrmd--h~agLA~-YL~~NGFhViRyDsl~HvGlSsG~-I~eftms~g~~sL~~V~dwl~~~g~-- 100 (294)
T PF02273_consen 27 PKRNNTILIAPGFARRMD--HFAGLAE-YLSANGFHVIRYDSLNHVGLSSGD-INEFTMSIGKASLLTVIDWLATRGI-- 100 (294)
T ss_dssp ---S-EEEEE-TT-GGGG--GGHHHHH-HHHTTT--EEEE---B--------------HHHHHHHHHHHHHHHHHTT---
T ss_pred cccCCeEEEecchhHHHH--HHHHHHH-HHhhCCeEEEeccccccccCCCCC-hhhcchHHhHHHHHHHHHHHHhcCC--
Confidence 345689999999998874 4788886 999999999999966432 11110 0111122334577888899988876
Q ss_pred ccEEEEEechhhHHHhhhhhhccCccccee
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHLTHRMHKII 130 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~~~~v~~i~ 130 (247)
+++-||.-||-|.||..++... .++.++
T Consensus 101 ~~~GLIAaSLSaRIAy~Va~~i--~lsfLi 128 (294)
T PF02273_consen 101 RRIGLIAASLSARIAYEVAADI--NLSFLI 128 (294)
T ss_dssp --EEEEEETTHHHHHHHHTTTS----SEEE
T ss_pred CcchhhhhhhhHHHHHHHhhcc--CcceEE
Confidence 7899999999999998888754 244444
No 148
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.40 E-value=0.00051 Score=57.71 Aligned_cols=151 Identities=15% Similarity=0.069 Sum_probs=82.1
Q ss_pred CeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEE
Q psy16575 26 RNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHC 105 (247)
Q Consensus 26 ~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~l 105 (247)
..++.+|=-+++. ..++.... .+.. ++.++++.|++.+.... .....+++.++..++.-+.- -..-.++.+
T Consensus 8 ~~L~cfP~AGGsa--~~fr~W~~-~lp~-~iel~avqlPGR~~r~~-ep~~~di~~Lad~la~el~~----~~~d~P~al 78 (244)
T COG3208 8 LRLFCFPHAGGSA--SLFRSWSR-RLPA-DIELLAVQLPGRGDRFG-EPLLTDIESLADELANELLP----PLLDAPFAL 78 (244)
T ss_pred ceEEEecCCCCCH--HHHHHHHh-hCCc-hhheeeecCCCcccccC-CcccccHHHHHHHHHHHhcc----ccCCCCeee
Confidence 4455555444444 23444333 4443 69999999999765421 12233444444444443321 122357999
Q ss_pred EEechhhHHHhhhhhhccC---cccceeeecCCCccccccCCcccccCcCCCCeeeEEEeCCC----------CCCCCCc
Q psy16575 106 VGHSLGAHICGMMSNHLTH---RMHKIIGIDPARPLVDRYGDKAFRLTRDDANFVQVIHTNAW----------FLGEAPQ 172 (247)
Q Consensus 106 iGhSlGg~va~~~a~~~~~---~v~~i~~LdPa~p~f~~~~~~~~rL~~~dA~~V~viht~~~----------~~G~~~~ 172 (247)
.||||||.||-.+++.+.+ ....+....-..|....... ....+|++|++.+-.-.+ ..-+..|
T Consensus 79 fGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~---i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LP 155 (244)
T COG3208 79 FGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQ---IHHLDDADFLADLVDLGGTPPELLEDPELMALFLP 155 (244)
T ss_pred cccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCC---ccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHH
Confidence 9999999999999988642 12223333333343222111 235567777665432211 1123346
Q ss_pred ccceeeecCCCc-CCCC
Q psy16575 173 VGHVDFCVNGGR-MQPS 188 (247)
Q Consensus 173 ~g~~dfy~ngg~-~qPg 188 (247)
+=..||....+. .+|-
T Consensus 156 ilRAD~~~~e~Y~~~~~ 172 (244)
T COG3208 156 ILRADFRALESYRYPPP 172 (244)
T ss_pred HHHHHHHHhcccccCCC
Confidence 778899988765 4443
No 149
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=97.40 E-value=0.00058 Score=61.11 Aligned_cols=106 Identities=16% Similarity=0.219 Sum_probs=55.7
Q ss_pred CCCCeEEEEeCCCCCCC----------------CChHHHHHHHHHhcCCcEEEEEcCCCCCCCC---------C--hHHH
Q psy16575 23 PHKRNVIIIHGFNQSES----------------QSPMTIIRDAYIRRRDYNVFMLDFADLAPFP---------C--YLSS 75 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~----------------~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~---------~--y~~~ 75 (247)
...|.||.+||-.+... ..+...+.. +|.++||-|+++|-.+.+... + |...
T Consensus 113 ~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~-~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~l 191 (390)
T PF12715_consen 113 GPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGD-QLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQAL 191 (390)
T ss_dssp S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHH-HHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHH
T ss_pred CCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHH-HHHhCCCEEEEEccccccccccccccccccchhHHHH
Confidence 34578999999543310 011223454 677889999999977654221 1 1111
Q ss_pred hhcHHHHHH--------HHHHHHHHHHH-cCCCCccEEEEEechhhHHHhhhhhhccCccccee
Q psy16575 76 LSNTRLVAQ--------CAAQFYSHLTH-HGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKII 130 (247)
Q Consensus 76 ~~~~~~v~~--------~l~~~i~~l~~-~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~ 130 (247)
..+...++. +.-..+++|.. -.+++++|-++||||||..+.+++.. .++|...+
T Consensus 192 a~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaAL-DdRIka~v 254 (390)
T PF12715_consen 192 ARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAAL-DDRIKATV 254 (390)
T ss_dssp HHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEE
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHc-chhhHhHh
Confidence 122212222 22234455543 35788999999999999999888775 45565443
No 150
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=97.28 E-value=0.0014 Score=59.56 Aligned_cols=98 Identities=12% Similarity=0.132 Sum_probs=62.2
Q ss_pred CeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEE
Q psy16575 26 RNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHC 105 (247)
Q Consensus 26 ~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~l 105 (247)
|++|+|--+.+.... ..+.+++.++. |+.|+++||......+ .........+-...+.++++. .|. + +||
T Consensus 103 ~pvLiV~Pl~g~~~~-L~RS~V~~Ll~--g~dVYl~DW~~p~~vp-~~~~~f~ldDYi~~l~~~i~~---~G~--~-v~l 172 (406)
T TIGR01849 103 PAVLIVAPMSGHYAT-LLRSTVEALLP--DHDVYITDWVNARMVP-LSAGKFDLEDYIDYLIEFIRF---LGP--D-IHV 172 (406)
T ss_pred CcEEEEcCCchHHHH-HHHHHHHHHhC--CCcEEEEeCCCCCCCc-hhcCCCCHHHHHHHHHHHHHH---hCC--C-CcE
Confidence 789999988766532 34666764554 7999999999876442 111222222222344444433 343 4 999
Q ss_pred EEechhhHHHhhhhhhc-----cCcccceeeec
Q psy16575 106 VGHSLGAHICGMMSNHL-----THRMHKIIGID 133 (247)
Q Consensus 106 iGhSlGg~va~~~a~~~-----~~~v~~i~~Ld 133 (247)
+|+++||..+..++..+ |.+++.+|.+.
T Consensus 173 ~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~ 205 (406)
T TIGR01849 173 IAVCQPAVPVLAAVALMAENEPPAQPRSMTLMG 205 (406)
T ss_pred EEEchhhHHHHHHHHHHHhcCCCCCcceEEEEe
Confidence 99999999875555444 45688888763
No 151
>KOG3847|consensus
Probab=97.27 E-value=0.00092 Score=58.07 Aligned_cols=43 Identities=14% Similarity=0.215 Sum_probs=33.0
Q ss_pred CCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCC
Q psy16575 22 DPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLA 67 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~ 67 (247)
+.+-|++||-||..++.+ .+..+.- -|+.+||-|.++..|..+
T Consensus 115 ~~k~PvvvFSHGLggsRt--~YSa~c~-~LAShG~VVaavEHRD~S 157 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRT--LYSAYCT-SLASHGFVVAAVEHRDRS 157 (399)
T ss_pred CCCccEEEEecccccchh--hHHHHhh-hHhhCceEEEEeecccCc
Confidence 345699999999999984 5666665 455678999999988654
No 152
>KOG2541|consensus
Probab=97.19 E-value=0.0043 Score=52.81 Aligned_cols=101 Identities=19% Similarity=0.178 Sum_probs=63.0
Q ss_pred CeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEE
Q psy16575 26 RNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHC 105 (247)
Q Consensus 26 ~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~l 105 (247)
.++|+.||..++..+..+..+.+.+-+-.|..|.++|....-.. ....+..+-...+-+.+..+.+ -.+-+++
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig~g~~~----s~l~pl~~Qv~~~ce~v~~m~~---lsqGyni 96 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIGDGIKD----SSLMPLWEQVDVACEKVKQMPE---LSQGYNI 96 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEecCCcch----hhhccHHHHHHHHHHHHhcchh---ccCceEE
Confidence 57888999988886545666666333346789999997665221 1111222222222222322222 2367999
Q ss_pred EEechhhHHHhhhhhhcc-Ccccceeeec
Q psy16575 106 VGHSLGAHICGMMSNHLT-HRMHKIIGID 133 (247)
Q Consensus 106 iGhSlGg~va~~~a~~~~-~~v~~i~~Ld 133 (247)
||.|.||.+|..++...+ ..|...+.|.
T Consensus 97 vg~SQGglv~Raliq~cd~ppV~n~ISL~ 125 (296)
T KOG2541|consen 97 VGYSQGGLVARALIQFCDNPPVKNFISLG 125 (296)
T ss_pred EEEccccHHHHHHHHhCCCCCcceeEecc
Confidence 999999999988888765 3566666663
No 153
>COG3150 Predicted esterase [General function prediction only]
Probab=97.19 E-value=0.0031 Score=50.11 Aligned_cols=94 Identities=16% Similarity=0.232 Sum_probs=52.3
Q ss_pred EEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEEEE
Q psy16575 28 VIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHCVG 107 (247)
Q Consensus 28 vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~liG 107 (247)
||++|||.+++.+.. ..+...++... ...+. ++-- ..+.+ .+...+.+..++ .+.+- +.+.|+|
T Consensus 2 ilYlHGFnSSP~shk-a~l~~q~~~~~-~~~i~--y~~p-~l~h~------p~~a~~ele~~i---~~~~~--~~p~ivG 65 (191)
T COG3150 2 ILYLHGFNSSPGSHK-AVLLLQFIDED-VRDIE--YSTP-HLPHD------PQQALKELEKAV---QELGD--ESPLIVG 65 (191)
T ss_pred eEEEecCCCCcccHH-HHHHHHHHhcc-cccee--eecC-CCCCC------HHHHHHHHHHHH---HHcCC--CCceEEe
Confidence 899999999886532 23333355543 22222 2111 11112 222233333333 33332 4599999
Q ss_pred echhhHHHhhhhhhccCcccceeeecCCCcccc
Q psy16575 108 HSLGAHICGMMSNHLTHRMHKIIGIDPARPLVD 140 (247)
Q Consensus 108 hSlGg~va~~~a~~~~~~v~~i~~LdPa~p~f~ 140 (247)
-||||.-|..++.... + +-+.++||.-.++
T Consensus 66 ssLGGY~At~l~~~~G--i-rav~~NPav~P~e 95 (191)
T COG3150 66 SSLGGYYATWLGFLCG--I-RAVVFNPAVRPYE 95 (191)
T ss_pred ecchHHHHHHHHHHhC--C-hhhhcCCCcCchh
Confidence 9999999999988764 2 2345788754444
No 154
>KOG1516|consensus
Probab=97.10 E-value=0.0029 Score=59.78 Aligned_cols=96 Identities=16% Similarity=0.101 Sum_probs=56.0
Q ss_pred CCeEEEEeCCCCCCCC-ChHHHH-HHHHHhcCCcEEEEEcCCCCCCC---CChHHHhhc--HHHHHHHHHHHHHHHHHcC
Q psy16575 25 KRNVIIIHGFNQSESQ-SPMTII-RDAYIRRRDYNVFMLDFADLAPF---PCYLSSLSN--TRLVAQCAAQFYSHLTHHG 97 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~-~~~~~l-~~~~l~~~~~~Vi~vD~~~~~~~---~~y~~~~~~--~~~v~~~l~~~i~~l~~~~ 97 (247)
.|++|+|||-.-.... ..+... ....+..++.-|+.+.||-..-. ..-.....| ..+....+.++-+.+..+|
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 7999999993221111 111111 12234445688888898853110 000001122 2344445555556677888
Q ss_pred CCCccEEEEEechhhHHHhhhhh
Q psy16575 98 ASAYDIHCVGHSLGAHICGMMSN 120 (247)
Q Consensus 98 ~~~~~i~liGhSlGg~va~~~a~ 120 (247)
-++++|+|+|||.||..+.+...
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~ 214 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTL 214 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhc
Confidence 89999999999999999866543
No 155
>KOG2565|consensus
Probab=97.05 E-value=0.0022 Score=56.98 Aligned_cols=96 Identities=10% Similarity=0.129 Sum_probs=64.1
Q ss_pred CeEEEEeCCCCCCCCChHHHHHHHHHhcC---------CcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHc
Q psy16575 26 RNVIIIHGFNQSESQSPMTIIRDAYIRRR---------DYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHH 96 (247)
Q Consensus 26 ~~vv~iHG~~~~~~~~~~~~l~~~~l~~~---------~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~ 96 (247)
.+++++|||.++..+ ++ .+.. +|... -+.||++-.++++-+..-...--+...+++.+..++ ...
T Consensus 153 ~PlLl~HGwPGsv~E-Fy-kfIP-lLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLM---lRL 226 (469)
T KOG2565|consen 153 KPLLLLHGWPGSVRE-FY-KFIP-LLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLM---LRL 226 (469)
T ss_pred cceEEecCCCchHHH-HH-hhhh-hhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHHH---HHh
Confidence 479999999999753 33 4443 55443 278999999988765321112223333444444433 344
Q ss_pred CCCCccEEEEEechhhHHHhhhhhhccCcccce
Q psy16575 97 GASAYDIHCVGHSLGAHICGMMSNHLTHRMHKI 129 (247)
Q Consensus 97 ~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i 129 (247)
|. ++..+=|--.|+.|+..++..+|++|..+
T Consensus 227 g~--nkffiqGgDwGSiI~snlasLyPenV~Gl 257 (469)
T KOG2565|consen 227 GY--NKFFIQGGDWGSIIGSNLASLYPENVLGL 257 (469)
T ss_pred Cc--ceeEeecCchHHHHHHHHHhhcchhhhHh
Confidence 54 89999999999999999999999866543
No 156
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.01 E-value=0.0024 Score=55.17 Aligned_cols=101 Identities=15% Similarity=0.139 Sum_probs=61.5
Q ss_pred CeEEEEeCCCCCCCCChHHHHHHH-----H-HhcCCcEEEEEcCCCC-CCCCChHHHhhcHHHHHHHHHHHHH-HH-HHc
Q psy16575 26 RNVIIIHGFNQSESQSPMTIIRDA-----Y-IRRRDYNVFMLDFADL-APFPCYLSSLSNTRLVAQCAAQFYS-HL-THH 96 (247)
Q Consensus 26 ~~vv~iHG~~~~~~~~~~~~l~~~-----~-l~~~~~~Vi~vD~~~~-~~~~~y~~~~~~~~~v~~~l~~~i~-~l-~~~ 96 (247)
|++||+||-...++. ....+... + ..+..+-|+++.|... +.+. .++...-..+-+++. .+ .+.
T Consensus 192 PLvlfLHgagq~g~d-n~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e------~~t~~~l~~~idli~~vlas~y 264 (387)
T COG4099 192 PLVLFLHGAGQGGSD-NDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSE------EKTLLYLIEKIDLILEVLASTY 264 (387)
T ss_pred cEEEEEecCCCCCch-hhhhhhcCccceeeecccCceEEEcccccccccccc------cccchhHHHHHHHHHHHHhhcc
Confidence 899999997766643 22221110 1 1122345666666652 2221 112222222333333 33 467
Q ss_pred CCCCccEEEEEechhhHHHhhhhhhccCcccceeeec
Q psy16575 97 GASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGID 133 (247)
Q Consensus 97 ~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~Ld 133 (247)
+++.++|+++|.|+||.-+..++.++|+....++.+.
T Consensus 265 nID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~ia 301 (387)
T COG4099 265 NIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIA 301 (387)
T ss_pred CcccceEEEEeecCcchhhHHHHHhCchhhheeeeec
Confidence 8888999999999999999999999999777766553
No 157
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.96 E-value=0.001 Score=56.72 Aligned_cols=108 Identities=16% Similarity=0.103 Sum_probs=69.2
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCC----CChHHH----------h---h---cHHHH
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPF----PCYLSS----------L---S---NTRLV 82 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~----~~y~~~----------~---~---~~~~v 82 (247)
...|.||-.||+++.... |. .+. .+...||.|+.+|-|+.+.+ ..+... . . ..+.+
T Consensus 81 ~~~P~vV~fhGY~g~~g~-~~-~~l--~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v 156 (321)
T COG3458 81 GKLPAVVQFHGYGGRGGE-WH-DML--HWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGV 156 (321)
T ss_pred CccceEEEEeeccCCCCC-cc-ccc--cccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeee
Confidence 457899999999998853 32 322 23446899999999986544 111111 0 0 01233
Q ss_pred HHHHHHHHHHHHH-cCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 83 AQCAAQFYSHLTH-HGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 83 ~~~l~~~i~~l~~-~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
-.++.+.++.+.. ..++.++|.+-|-|.||.|+..++..- .|+++.+..-|-
T Consensus 157 ~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~-~rik~~~~~~Pf 209 (321)
T COG3458 157 FLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALD-PRIKAVVADYPF 209 (321)
T ss_pred hHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcC-hhhhcccccccc
Confidence 3445555555443 346779999999999999998877653 456666655544
No 158
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=96.95 E-value=0.0064 Score=48.85 Aligned_cols=87 Identities=15% Similarity=0.159 Sum_probs=53.0
Q ss_pred HHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhc
Q psy16575 43 MTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 43 ~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~ 122 (247)
+..+.. .+.. ++.|+.+|.++....... ..........+ .+.+... ....+++++|||+||.++..++..+
T Consensus 15 ~~~~~~-~l~~-~~~v~~~~~~g~~~~~~~---~~~~~~~~~~~---~~~l~~~-~~~~~~~l~g~s~Gg~~a~~~a~~l 85 (212)
T smart00824 15 YARLAA-ALRG-RRDVSALPLPGFGPGEPL---PASADALVEAQ---AEAVLRA-AGGRPFVLVGHSSGGLLAHAVAARL 85 (212)
T ss_pred HHHHHH-hcCC-CccEEEecCCCCCCCCCC---CCCHHHHHHHH---HHHHHHh-cCCCCeEEEEECHHHHHHHHHHHHH
Confidence 455554 4554 589999999887543211 11223222222 2222221 1235799999999999998887764
Q ss_pred ---cCcccceeeecCCCcc
Q psy16575 123 ---THRMHKIIGIDPARPL 138 (247)
Q Consensus 123 ---~~~v~~i~~LdPa~p~ 138 (247)
+.++..++.+|+..|.
T Consensus 86 ~~~~~~~~~l~~~~~~~~~ 104 (212)
T smart00824 86 EARGIPPAAVVLLDTYPPG 104 (212)
T ss_pred HhCCCCCcEEEEEccCCCC
Confidence 3467788888766553
No 159
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=96.93 E-value=0.0049 Score=53.76 Aligned_cols=86 Identities=20% Similarity=0.270 Sum_probs=52.5
Q ss_pred HHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHH----HcCCC-CccEEEEEechhhHHHhhhh
Q psy16575 45 IIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLT----HHGAS-AYDIHCVGHSLGAHICGMMS 119 (247)
Q Consensus 45 ~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~----~~~~~-~~~i~liGhSlGg~va~~~a 119 (247)
.+...+|++ ||.|++.||.+.+.. |...... +..+-+.++..+ ..+++ ..++.++|||.||+-++.++
T Consensus 17 ~~l~~~L~~-GyaVv~pDY~Glg~~--y~~~~~~----a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA 89 (290)
T PF03583_consen 17 PFLAAWLAR-GYAVVAPDYEGLGTP--YLNGRSE----AYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAA 89 (290)
T ss_pred HHHHHHHHC-CCEEEecCCCCCCCc--ccCcHhH----HHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHH
Confidence 444557775 699999999988763 6443333 333334443322 23443 26899999999999998777
Q ss_pred hhcc---Cccc-ceeeecCCCc
Q psy16575 120 NHLT---HRMH-KIIGIDPARP 137 (247)
Q Consensus 120 ~~~~---~~v~-~i~~LdPa~p 137 (247)
+.-+ ..+. .|+|....+|
T Consensus 90 ~l~~~YApeL~~~l~Gaa~gg~ 111 (290)
T PF03583_consen 90 ELAPSYAPELNRDLVGAAAGGP 111 (290)
T ss_pred HHhHHhCcccccceeEEeccCC
Confidence 5422 2232 3555554444
No 160
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.90 E-value=0.0024 Score=48.87 Aligned_cols=24 Identities=33% Similarity=0.634 Sum_probs=20.6
Q ss_pred CccEEEEEechhhHHHhhhhhhcc
Q psy16575 100 AYDIHCVGHSLGAHICGMMSNHLT 123 (247)
Q Consensus 100 ~~~i~liGhSlGg~va~~~a~~~~ 123 (247)
..+|.+.||||||.+|..++..+.
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHHH
T ss_pred CccchhhccchHHHHHHHHHHhhh
Confidence 378999999999999988887654
No 161
>KOG4840|consensus
Probab=96.84 E-value=0.0054 Score=51.00 Aligned_cols=126 Identities=15% Similarity=0.119 Sum_probs=75.1
Q ss_pred CceEEecCCCCccccCCCCCCCCeEEEEeCCCCCCCC-ChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHH
Q psy16575 4 TKTRINILKSNSLKYAGWDPHKRNVIIIHGFNQSESQ-SPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLV 82 (247)
Q Consensus 4 ~g~~i~~~~~~~l~~s~~~~~~~~vv~iHG~~~~~~~-~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v 82 (247)
.|..+......++..-.-+..+-.+|||-|.++.--. .+...+.. +|.+.+|.++-+-.+..-.- | .....++-
T Consensus 15 rgvlF~y~~Ks~~va~~~gv~~~~vvfiGGLgdgLl~~~y~~~L~~-~lde~~wslVq~q~~Ssy~G--~--Gt~slk~D 89 (299)
T KOG4840|consen 15 RGVLFVYDSKSSLVAYSNGVESVKVVFIGGLGDGLLICLYTTMLNR-YLDENSWSLVQPQLRSSYNG--Y--GTFSLKDD 89 (299)
T ss_pred eeeEEEecCccceeeeccCceEEEEEEEcccCCCccccccHHHHHH-HHhhccceeeeeeccccccc--c--cccccccc
Confidence 4444444444443222223345678999887765322 34455555 77777899998876653221 1 11123344
Q ss_pred HHHHHHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhh--ccCcccceeeecCC
Q psy16575 83 AQCAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNH--LTHRMHKIIGIDPA 135 (247)
Q Consensus 83 ~~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~--~~~~v~~i~~LdPa 135 (247)
.+++..+++++...+.+ .+|.|+|||-|-+=..++... .+.+|..-++..|.
T Consensus 90 ~edl~~l~~Hi~~~~fS-t~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApV 143 (299)
T KOG4840|consen 90 VEDLKCLLEHIQLCGFS-TDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPV 143 (299)
T ss_pred HHHHHHHHHHhhccCcc-cceEEEecCccchHHHHHHHhccchHHHHHHHHhCcc
Confidence 56778888877655554 599999999999888766522 23455555555554
No 162
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=96.83 E-value=0.0056 Score=60.33 Aligned_cols=84 Identities=11% Similarity=0.046 Sum_probs=59.8
Q ss_pred HHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHc---------------CCCCccEEEEEechhhHH
Q psy16575 50 YIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHH---------------GASAYDIHCVGHSLGAHI 114 (247)
Q Consensus 50 ~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~---------------~~~~~~i~liGhSlGg~v 114 (247)
++..+||+|+.+|.|+.+.|...... .. ..-.++..+.|++|... .....+|-++|.|+||.+
T Consensus 274 ~~~~rGYaVV~~D~RGtg~SeG~~~~-~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~ 351 (767)
T PRK05371 274 YFLPRGFAVVYVSGIGTRGSDGCPTT-GD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTL 351 (767)
T ss_pred HHHhCCeEEEEEcCCCCCCCCCcCcc-CC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHH
Confidence 66667899999999998776443221 11 22345667778887631 122469999999999999
Q ss_pred HhhhhhhccCcccceeeecCC
Q psy16575 115 CGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 115 a~~~a~~~~~~v~~i~~LdPa 135 (247)
+..+|...+..++.|+...+.
T Consensus 352 ~~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 352 PNAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred HHHHHhhCCCcceEEEeeCCC
Confidence 998888777778888876544
No 163
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.83 E-value=0.0024 Score=53.57 Aligned_cols=35 Identities=23% Similarity=0.373 Sum_probs=29.3
Q ss_pred ccEEEEEechhhHHHhhhhhhcc----CcccceeeecCC
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHLT----HRMHKIIGIDPA 135 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~~----~~v~~i~~LdPa 135 (247)
.++.+.|||+||.+|.+++.... .+|.++...|.+
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 46999999999999999988754 578888888754
No 164
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.83 E-value=0.0027 Score=54.97 Aligned_cols=109 Identities=16% Similarity=0.102 Sum_probs=67.6
Q ss_pred CCCeEEEEeC--CCCCCCCChHHHHHHHHHhc---CCcEEEEEcCCCCCCC-CChHHHhhcHHHHHHHHHHHHHHHHHcC
Q psy16575 24 HKRNVIIIHG--FNQSESQSPMTIIRDAYIRR---RDYNVFMLDFADLAPF-PCYLSSLSNTRLVAQCAAQFYSHLTHHG 97 (247)
Q Consensus 24 ~~~~vv~iHG--~~~~~~~~~~~~l~~~~l~~---~~~~Vi~vD~~~~~~~-~~y~~~~~~~~~v~~~l~~~i~~l~~~~ 97 (247)
+.|++++.|| |..+. ... .+.++++.. ....++.+|+-..... ..|.......+.+++.+--+++.--..-
T Consensus 97 k~pvl~~~DG~~~~~~g--~i~-~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~ 173 (299)
T COG2382 97 KYPVLYLQDGQDWFRSG--RIP-RILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTS 173 (299)
T ss_pred cccEEEEeccHHHHhcC--ChH-HHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCccc
Confidence 4689999999 55554 223 333445554 2478888887653211 1122222233444444444444311111
Q ss_pred CCCccEEEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 98 ASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 98 ~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
-..+.-.|.|-||||.++.++|..+|+++++++...|.
T Consensus 174 ~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps 211 (299)
T COG2382 174 ADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGS 211 (299)
T ss_pred ccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCc
Confidence 12356789999999999999999999999999988766
No 165
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.76 E-value=0.024 Score=48.43 Aligned_cols=40 Identities=18% Similarity=0.151 Sum_probs=35.3
Q ss_pred cCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 96 HGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 96 ~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
...+.++..|+||||||.++..+....|+.+++.....|+
T Consensus 132 y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPS 171 (264)
T COG2819 132 YRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPS 171 (264)
T ss_pred cccCcccceeeeecchhHHHHHHHhcCcchhceeeeecch
Confidence 4456678999999999999999999999999999888877
No 166
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=96.72 E-value=0.0037 Score=52.02 Aligned_cols=56 Identities=16% Similarity=0.323 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHc-CCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCCccccc
Q psy16575 85 CAAQFYSHLTHH-GASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARPLVDR 141 (247)
Q Consensus 85 ~l~~~i~~l~~~-~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p~f~~ 141 (247)
++.+.+++|.+. .++.++|.|+|.|.||-+|..+|..++ .|..++++.|..-.+..
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~ 61 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQG 61 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SS
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecc
Confidence 556677787754 566689999999999999999999998 69999999998766653
No 167
>KOG2100|consensus
Probab=96.69 E-value=0.0083 Score=59.02 Aligned_cols=112 Identities=14% Similarity=0.102 Sum_probs=67.5
Q ss_pred CCeEEEEeCCCCCCC--CChHHHHHHHHHhcCCcEEEEEcCCCCCCCC-ChHHHhh-cH--HHHHHHHHHHHHHHHHcCC
Q psy16575 25 KRNVIIIHGFNQSES--QSPMTIIRDAYIRRRDYNVFMLDFADLAPFP-CYLSSLS-NT--RLVAQCAAQFYSHLTHHGA 98 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~--~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~-~y~~~~~-~~--~~v~~~l~~~i~~l~~~~~ 98 (247)
-|++|.+||-.++.. ..+............|+.|+.+|.|+.+... .+..+.. +. ..+...+......++..-+
T Consensus 526 yPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~i 605 (755)
T KOG2100|consen 526 YPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFI 605 (755)
T ss_pred CCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccc
Confidence 478999999776321 1122222222445678999999999876442 1211111 11 1222222222122333467
Q ss_pred CCccEEEEEechhhHHHhhhhhhccCcccce-eeecCCC
Q psy16575 99 SAYDIHCVGHSLGAHICGMMSNHLTHRMHKI-IGIDPAR 136 (247)
Q Consensus 99 ~~~~i~liGhSlGg~va~~~a~~~~~~v~~i-~~LdPa~ 136 (247)
|.++|.+.|+|-||.++..+....++++.+. ++++|..
T Consensus 606 D~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVt 644 (755)
T KOG2100|consen 606 DRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVT 644 (755)
T ss_pred cHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEeccee
Confidence 8899999999999999998888877666555 7787764
No 168
>KOG4372|consensus
Probab=96.68 E-value=0.0014 Score=58.72 Aligned_cols=108 Identities=18% Similarity=0.181 Sum_probs=59.1
Q ss_pred EecCCCCccccCC--C-CCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHH
Q psy16575 8 INILKSNSLKYAG--W-DPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQ 84 (247)
Q Consensus 8 i~~~~~~~l~~s~--~-~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~ 84 (247)
+...+++.++... + ......+|++||..+.....|...+.+.-....+..++.-++.+. +......+..++.
T Consensus 60 ve~~t~~~~w~~p~~~~~k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~-----~~~T~~Gv~~lG~ 134 (405)
T KOG4372|consen 60 VERLTTEDLWDLPYSFPTKPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNN-----MCQTFDGVDVLGE 134 (405)
T ss_pred eecccccccccCCcccccCCceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccc-----hhhccccceeeec
Confidence 4444455544322 1 223458999999887211123333333223334555554444432 2223344556666
Q ss_pred HHHHHHHH-HHHcCCCCccEEEEEechhhHHHhhhhhhc
Q psy16575 85 CAAQFYSH-LTHHGASAYDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 85 ~l~~~i~~-l~~~~~~~~~i~liGhSlGg~va~~~a~~~ 122 (247)
.+++.+.. +... +.++|.+|||||||.++.++-.++
T Consensus 135 Rla~~~~e~~~~~--si~kISfvghSLGGLvar~AIgyl 171 (405)
T KOG4372|consen 135 RLAEEVKETLYDY--SIEKISFVGHSLGGLVARYAIGYL 171 (405)
T ss_pred ccHHHHhhhhhcc--ccceeeeeeeecCCeeeeEEEEee
Confidence 66665332 3222 258999999999999997775543
No 169
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=96.58 E-value=0.046 Score=49.48 Aligned_cols=29 Identities=14% Similarity=0.193 Sum_probs=25.6
Q ss_pred cEEEEEechhhHHHhhhhhhccCccccee
Q psy16575 102 DIHCVGHSLGAHICGMMSNHLTHRMHKII 130 (247)
Q Consensus 102 ~i~liGhSlGg~va~~~a~~~~~~v~~i~ 130 (247)
++.++|+|-||.+|..+++..|..+..|+
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~i 213 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVI 213 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEE
Confidence 89999999999999999999987776654
No 170
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.55 E-value=0.0091 Score=53.67 Aligned_cols=87 Identities=16% Similarity=0.174 Sum_probs=63.9
Q ss_pred eEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHH-HcCCCCccEEE
Q psy16575 27 NVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLT-HHGASAYDIHC 105 (247)
Q Consensus 27 ~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~-~~~~~~~~i~l 105 (247)
.-||+-|=++-. +.-+.+.+ .|++.|+.|+-+|- ..|......-+.++.++..++++.. +.+. +++.|
T Consensus 262 ~av~~SGDGGWr--~lDk~v~~-~l~~~gvpVvGvds------LRYfW~~rtPe~~a~Dl~r~i~~y~~~w~~--~~~~l 330 (456)
T COG3946 262 VAVFYSGDGGWR--DLDKEVAE-ALQKQGVPVVGVDS------LRYFWSERTPEQIAADLSRLIRFYARRWGA--KRVLL 330 (456)
T ss_pred EEEEEecCCchh--hhhHHHHH-HHHHCCCceeeeeh------hhhhhccCCHHHHHHHHHHHHHHHHHhhCc--ceEEE
Confidence 456666632222 12345555 67888999999992 2466666777889999999999865 4665 79999
Q ss_pred EEechhhHHHhhhhhhccC
Q psy16575 106 VGHSLGAHICGMMSNHLTH 124 (247)
Q Consensus 106 iGhSlGg~va~~~a~~~~~ 124 (247)
||+|.||-|.-++-++++.
T Consensus 331 iGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 331 IGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred EeecccchhhHHHHHhCCH
Confidence 9999999999888888774
No 171
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=96.50 E-value=0.0051 Score=57.15 Aligned_cols=98 Identities=17% Similarity=0.215 Sum_probs=58.1
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHH---------------H-HHHHhcCCcEEEEEcCC-CCCCCCCh-HHHhhcHHHHHH
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTII---------------R-DAYIRRRDYNVFMLDFA-DLAPFPCY-LSSLSNTRLVAQ 84 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l---------------~-~~~l~~~~~~Vi~vD~~-~~~~~~~y-~~~~~~~~~v~~ 84 (247)
.+.|++|+++|-.+.... .-.+ . +.+-=....+++.+|.+ +.+.+... .....+...+++
T Consensus 75 ~~~Pl~lwlnGGPG~ss~--~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~ 152 (462)
T PTZ00472 75 PEAPVLLWMTGGPGCSSM--FALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKADYDHNESEVSE 152 (462)
T ss_pred CCCCEEEEECCCCcHHHH--HhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCCCCCCCChHHHHH
Confidence 456999999998776532 1000 0 00100113789999976 33333100 111234467777
Q ss_pred HHHHHHHHH-HHc-CCCCccEEEEEechhhHHHhhhhhhc
Q psy16575 85 CAAQFYSHL-THH-GASAYDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 85 ~l~~~i~~l-~~~-~~~~~~i~liGhSlGg~va~~~a~~~ 122 (247)
++.++++.. .+. .....+++|+|||+||+.+..++.++
T Consensus 153 d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i 192 (462)
T PTZ00472 153 DMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRI 192 (462)
T ss_pred HHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHH
Confidence 777777753 322 23347999999999999997776654
No 172
>KOG3043|consensus
Probab=96.50 E-value=0.02 Score=47.67 Aligned_cols=108 Identities=18% Similarity=0.170 Sum_probs=68.7
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCC-CCCCC-----h--HHHhhcHHHHHHHHHHHHHHHHHc
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADL-APFPC-----Y--LSSLSNTRLVAQCAAQFYSHLTHH 96 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~-~~~~~-----y--~~~~~~~~~v~~~l~~~i~~l~~~ 96 (247)
+..||+|--+.+... ...+..++ .++..||+|+++|+-.. ..++. + .....+....-+.+..++++|+..
T Consensus 39 ~~~li~i~DvfG~~~-~n~r~~Ad-k~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~ 116 (242)
T KOG3043|consen 39 KKVLIVIQDVFGFQF-PNTREGAD-KVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNH 116 (242)
T ss_pred CeEEEEEEeeecccc-HHHHHHHH-HHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHc
Confidence 346677666555543 23456666 45556899999996654 11111 1 112223445567888899998876
Q ss_pred CCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 97 GASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 97 ~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
+. ..+|-++|+.+||-++-.+....+ .+.+++.+.|..
T Consensus 117 g~-~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~ 154 (242)
T KOG3043|consen 117 GD-SKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSF 154 (242)
T ss_pred CC-cceeeEEEEeecceEEEEeeccch-hheeeeEecCCc
Confidence 63 489999999999988855554444 466666666553
No 173
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.49 E-value=0.0045 Score=58.66 Aligned_cols=140 Identities=19% Similarity=0.188 Sum_probs=82.1
Q ss_pred CCCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCC--ChHHHhhcHHHHHHHHHHHH---HHHHH
Q psy16575 21 WDPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFP--CYLSSLSNTRLVAQCAAQFY---SHLTH 95 (247)
Q Consensus 21 ~~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~--~y~~~~~~~~~v~~~l~~~i---~~l~~ 95 (247)
.+.++|.+++.-|--+......+...+=.++.+ |+-....--|+++... -|....... --....+|| +.|.+
T Consensus 444 ~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDR-GfiyAIAHVRGGgelG~~WYe~GK~l~--K~NTf~DFIa~a~~Lv~ 520 (682)
T COG1770 444 LDGSAPLLLYGYGAYGISMDPSFSIARLSLLDR-GFVYAIAHVRGGGELGRAWYEDGKLLN--KKNTFTDFIAAARHLVK 520 (682)
T ss_pred CCCCCcEEEEEeccccccCCcCcccceeeeecC-ceEEEEEEeecccccChHHHHhhhhhh--ccccHHHHHHHHHHHHH
Confidence 456678888888843333222332222125555 5777777777765331 122211111 011233333 33555
Q ss_pred cCC-CCccEEEEEechhhHHHhhhhhhccCccccee-----------eecCCCccccccCCcccccCcCCCCeeeEEEeC
Q psy16575 96 HGA-SAYDIHCVGHSLGAHICGMMSNHLTHRMHKII-----------GIDPARPLVDRYGDKAFRLTRDDANFVQVIHTN 163 (247)
Q Consensus 96 ~~~-~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~-----------~LdPa~p~f~~~~~~~~rL~~~dA~~V~viht~ 163 (247)
.+. +.+.+.++|-|.||.+++.+++..|+....|+ .|||..|+-...-++ .=.|.|+++-+.|-+-
T Consensus 521 ~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~E--WGNP~d~e~y~yikSY 598 (682)
T COG1770 521 EGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDE--WGNPLDPEYYDYIKSY 598 (682)
T ss_pred cCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCCccchhh--hCCcCCHHHHHHHhhc
Confidence 553 56799999999999999999999998777775 477777775443333 2355677777766665
Q ss_pred CC
Q psy16575 164 AW 165 (247)
Q Consensus 164 ~~ 165 (247)
..
T Consensus 599 SP 600 (682)
T COG1770 599 SP 600 (682)
T ss_pred Cc
Confidence 43
No 174
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.45 E-value=0.023 Score=45.92 Aligned_cols=91 Identities=15% Similarity=0.121 Sum_probs=45.0
Q ss_pred eEEEEeCCCCCCCCCh-HHHHHHHHHhcC---CcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCcc
Q psy16575 27 NVIIIHGFNQSESQSP-MTIIRDAYIRRR---DYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYD 102 (247)
Q Consensus 27 ~vv~iHG~~~~~~~~~-~~~l~~~~l~~~---~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~ 102 (247)
.||+.-|.++...... -..+.+.+-+.. ...+..++|+.......|..+... =...+...|+..... -+..+
T Consensus 7 ~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~~y~~S~~~---G~~~~~~~i~~~~~~-CP~~k 82 (179)
T PF01083_consen 7 HVIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPNSYGDSVAA---GVANLVRLIEEYAAR-CPNTK 82 (179)
T ss_dssp EEEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGGSCHHHHHH---HHHHHHHHHHHHHHH-STTSE
T ss_pred EEEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcccccccHHH---HHHHHHHHHHHHHHh-CCCCC
Confidence 4778888666543222 222333222222 356667788865433234333221 122333344333222 24469
Q ss_pred EEEEEechhhHHHhhhhhh
Q psy16575 103 IHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 103 i~liGhSlGg~va~~~a~~ 121 (247)
|.|+|+|+||+|+..+...
T Consensus 83 ivl~GYSQGA~V~~~~~~~ 101 (179)
T PF01083_consen 83 IVLAGYSQGAMVVGDALSG 101 (179)
T ss_dssp EEEEEETHHHHHHHHHHHH
T ss_pred EEEEecccccHHHHHHHHh
Confidence 9999999999999888776
No 175
>KOG2281|consensus
Probab=96.44 E-value=0.011 Score=55.99 Aligned_cols=101 Identities=16% Similarity=0.108 Sum_probs=64.1
Q ss_pred CCCCeEEEEeCCCCC----CCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCC-ChHHHhhc---HHHHHHHHHHHHHHHH
Q psy16575 23 PHKRNVIIIHGFNQS----ESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFP-CYLSSLSN---TRLVAQCAAQFYSHLT 94 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~----~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~-~y~~~~~~---~~~v~~~l~~~i~~l~ 94 (247)
++-||+++|-|-.+- .+..+...++-..|+..||.|+.+|=|+..... .+...... .-.+.+++.- ++.|.
T Consensus 640 kkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeg-lq~La 718 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEG-LQMLA 718 (867)
T ss_pred CCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHH-HHHHH
Confidence 456899999996553 122345566655777789999999999866432 11111110 0111222222 22332
Q ss_pred -HcC-CCCccEEEEEechhhHHHhhhhhhccC
Q psy16575 95 -HHG-ASAYDIHCVGHSLGAHICGMMSNHLTH 124 (247)
Q Consensus 95 -~~~-~~~~~i~liGhSlGg~va~~~a~~~~~ 124 (247)
+.| ++.++|.+-|+|.||.++.+...++|+
T Consensus 719 eq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~ 750 (867)
T KOG2281|consen 719 EQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPN 750 (867)
T ss_pred HhcCcccchheeEeccccccHHHHHHhhcCcc
Confidence 343 578999999999999999988888886
No 176
>KOG1553|consensus
Probab=96.34 E-value=0.017 Score=50.99 Aligned_cols=99 Identities=16% Similarity=0.146 Sum_probs=61.6
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHH-HHHcCCCCccE
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSH-LTHHGASAYDI 103 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~-l~~~~~~~~~i 103 (247)
+..||..-|-.+-..-.. +.. =++ .||.|+-++.++.+.+..-+ ...+.....+. ++++ +...+...++|
T Consensus 243 q~LvIC~EGNAGFYEvG~---m~t-P~~-lgYsvLGwNhPGFagSTG~P-~p~n~~nA~Da---VvQfAI~~Lgf~~edI 313 (517)
T KOG1553|consen 243 QDLVICFEGNAGFYEVGV---MNT-PAQ-LGYSVLGWNHPGFAGSTGLP-YPVNTLNAADA---VVQFAIQVLGFRQEDI 313 (517)
T ss_pred ceEEEEecCCccceEeee---ecC-hHH-hCceeeccCCCCccccCCCC-CcccchHHHHH---HHHHHHHHcCCCccce
Confidence 456666666444332111 111 122 47999999999987663221 11233322233 3333 45678888999
Q ss_pred EEEEechhhHHHhhhhhhccCcccceeeecC
Q psy16575 104 HCVGHSLGAHICGMMSNHLTHRMHKIIGIDP 134 (247)
Q Consensus 104 ~liGhSlGg~va~~~a~~~~~~v~~i~~LdP 134 (247)
.|.|+|.||.-+.++|..+|+ |+.++ ||.
T Consensus 314 ilygWSIGGF~~~waAs~YPd-Vkavv-LDA 342 (517)
T KOG1553|consen 314 ILYGWSIGGFPVAWAASNYPD-VKAVV-LDA 342 (517)
T ss_pred EEEEeecCCchHHHHhhcCCC-ceEEE-eec
Confidence 999999999999999999987 55554 443
No 177
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.32 E-value=0.011 Score=49.35 Aligned_cols=25 Identities=32% Similarity=0.626 Sum_probs=21.1
Q ss_pred CCccEEEEEechhhHHHhhhhhhcc
Q psy16575 99 SAYDIHCVGHSLGAHICGMMSNHLT 123 (247)
Q Consensus 99 ~~~~i~liGhSlGg~va~~~a~~~~ 123 (247)
+..++.+.||||||.+|..++..+.
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHHH
Confidence 4478999999999999988887654
No 178
>KOG3967|consensus
Probab=96.27 E-value=0.025 Score=46.79 Aligned_cols=107 Identities=18% Similarity=0.222 Sum_probs=59.5
Q ss_pred CCCCeEEEEeCCCCCCCCChHHH---------------HHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHH----HH
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTI---------------IRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRL----VA 83 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~---------------l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~----v~ 83 (247)
..++++|+|||-+--....|.+. +.+ ..+.||.|++.+-....+. |......... +.
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~r--Av~~Gygviv~N~N~~~kf--ye~k~np~kyirt~ve 174 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKR--AVAEGYGVIVLNPNRERKF--YEKKRNPQKYIRTPVE 174 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHH--HHHcCCcEEEeCCchhhhh--hhcccCcchhccchHH
Confidence 34579999999543322223332 222 2235799999985533221 1111111111 11
Q ss_pred HHHHHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhcc--CcccceeeecCC
Q psy16575 84 QCAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLT--HRMHKIIGIDPA 135 (247)
Q Consensus 84 ~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~--~~v~~i~~LdPa 135 (247)
...--++..+ .....+.+.++.||.||.....+..+++ ++|..|...|.+
T Consensus 175 h~~yvw~~~v--~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 175 HAKYVWKNIV--LPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHHHHHHHh--cccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 1111111111 1234589999999999999999999887 466677666655
No 179
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=96.21 E-value=0.011 Score=49.01 Aligned_cols=110 Identities=15% Similarity=0.244 Sum_probs=47.8
Q ss_pred CCCeEEEEeCCCCCCCC--ChHHHHHHHHHhcCCcEEEEEcCCCCC----CC---------------CChH--HH---hh
Q psy16575 24 HKRNVIIIHGFNQSESQ--SPMTIIRDAYIRRRDYNVFMLDFADLA----PF---------------PCYL--SS---LS 77 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~--~~~~~l~~~~l~~~~~~Vi~vD~~~~~----~~---------------~~y~--~~---~~ 77 (247)
.++.|+.+||+..+..- .-...|++ .|.+.++.++.+|=+-.. .. +.|. .. ..
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~-~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRK-ALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHH-HHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHH-HHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 47889999999999842 01223443 445435888888843211 00 0010 00 01
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhcc--------CcccceeeecCCCc
Q psy16575 78 NTRLVAQCAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLT--------HRMHKIIGIDPARP 137 (247)
Q Consensus 78 ~~~~v~~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~--------~~v~~i~~LdPa~p 137 (247)
....+.+.+..+.+.+.+.|- -.-|+|||.||.+|..++.... ..++-++.+....|
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GP---fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p 146 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGP---FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPP 146 (212)
T ss_dssp GG---HHHHHHHHHHHHHH------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----
T ss_pred cccCHHHHHHHHHHHHHhcCC---eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCC
Confidence 133444555555555655441 3569999999999977765432 13455566655544
No 180
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.11 E-value=0.013 Score=52.20 Aligned_cols=119 Identities=18% Similarity=0.265 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhccCc-----ccceeeecCCCccccccCCcccccCc-C
Q psy16575 79 TRLVAQCAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLTHR-----MHKIIGIDPARPLVDRYGDKAFRLTR-D 152 (247)
Q Consensus 79 ~~~v~~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~-----v~~i~~LdPa~p~f~~~~~~~~rL~~-~ 152 (247)
.+.++..+++.+..- ..| ..+|+||||||||.+..+..+.+.++ |..++.+..+.|. . ..++..+.. -
T Consensus 201 A~~aG~~LA~~L~~~-~~G--~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~--~-~~~W~~~r~vV 274 (345)
T PF05277_consen 201 AEKAGKVLADALLSR-NQG--ERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS--D-PEEWRKIRSVV 274 (345)
T ss_pred HHHHHHHHHHHHHHh-cCC--CCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC--C-HHHHHHHHHHc
Confidence 344555666554431 123 36899999999999998888777643 6677777533222 1 111112222 2
Q ss_pred CCCeeeEEEeCCCCCCCCCcccceeeecCCCc--CC---CCCCCcccccccccccccc
Q psy16575 153 DANFVQVIHTNAWFLGEAPQVGHVDFCVNGGR--MQ---PSCTKEGRMIRRARCSHFM 205 (247)
Q Consensus 153 dA~~V~viht~~~~~G~~~~~g~~dfy~ngg~--~q---Pgc~~~~~~~~~~~CsH~r 205 (247)
.-++|.+.-.+-..|++....-...+-+.|-. .. |++.+.+. .....+|..
T Consensus 275 sGr~vN~YS~~D~vL~~lyr~~~~~~~vaGl~~v~~~~~~~veNvdv--s~lV~gH~~ 330 (345)
T PF05277_consen 275 SGRLVNVYSENDWVLGFLYRASSLGLSVAGLQPVESMGVPGVENVDV--SDLVSGHLD 330 (345)
T ss_pred cCeEEEEecCcHHHHHHHHHhcccCcccceecceeccccCCceeeeC--ccccCCHHH
Confidence 34556555555445555443333333344322 22 55543221 223567774
No 181
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=96.07 E-value=0.018 Score=54.22 Aligned_cols=120 Identities=10% Similarity=-0.015 Sum_probs=72.9
Q ss_pred CceEEecCCCCccccCCCCCCCCeEEEEe--CCCCCCCCCh-HHHHHHH--HHhcCCcEEEEEcCCCCCCCCChHHHhhc
Q psy16575 4 TKTRINILKSNSLKYAGWDPHKRNVIIIH--GFNQSESQSP-MTIIRDA--YIRRRDYNVFMLDFADLAPFPCYLSSLSN 78 (247)
Q Consensus 4 ~g~~i~~~~~~~l~~s~~~~~~~~vv~iH--G~~~~~~~~~-~~~l~~~--~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~ 78 (247)
||.+|.++ |+.+.-....|+++..+ =+.-...... ...+... ++..+||.|+.+|-|+.+.|..-......
T Consensus 28 DGvrL~~d----Iy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~~~ 103 (563)
T COG2936 28 DGVRLAAD----IYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPESS 103 (563)
T ss_pred CCeEEEEE----EEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccceecc
Confidence 45555443 44444445678888888 2222110011 1122221 45667899999999998766422111111
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhccCcccce
Q psy16575 79 TRLVAQCAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKI 129 (247)
Q Consensus 79 ~~~v~~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i 129 (247)
+ =+++-.+.|+++.++.-..-+|-++|-|.+|....+++..-|.-++.|
T Consensus 104 -~-E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai 152 (563)
T COG2936 104 -R-EAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAI 152 (563)
T ss_pred -c-cccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheee
Confidence 1 234566778888776656679999999999999988887766544443
No 182
>COG0627 Predicted esterase [General function prediction only]
Probab=96.05 E-value=0.023 Score=50.12 Aligned_cols=34 Identities=15% Similarity=0.126 Sum_probs=28.2
Q ss_pred cEEEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 102 DIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 102 ~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
+..++||||||+=|..+|.+.|++.+.+..+.|.
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~ 186 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGI 186 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceecccccc
Confidence 7899999999999999999888877766655443
No 183
>KOG4388|consensus
Probab=95.99 E-value=0.025 Score=53.16 Aligned_cols=92 Identities=16% Similarity=0.219 Sum_probs=61.9
Q ss_pred CCCeEEEEeCC--CCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCc
Q psy16575 24 HKRNVIIIHGF--NQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAY 101 (247)
Q Consensus 24 ~~~~vv~iHG~--~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~ 101 (247)
++-.||-.||- -...++..-..+++ |.+..|.-|+.|||+-....| ++++. +.+--..-++|+.-...|...+
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~YLr~-Wa~aL~cPiiSVdYSLAPEaP-FPRal---eEv~fAYcW~inn~allG~TgE 469 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEPYLRS-WAQALGCPIISVDYSLAPEAP-FPRAL---EEVFFAYCWAINNCALLGSTGE 469 (880)
T ss_pred CceEEEEecCCceeeeccccccHHHHH-HHHHhCCCeEEeeeccCCCCC-CCcHH---HHHHHHHHHHhcCHHHhCcccc
Confidence 45588899993 22222233345554 777789999999999877664 44443 3343444566665555676779
Q ss_pred cEEEEEechhhHHHhhhhh
Q psy16575 102 DIHCVGHSLGAHICGMMSN 120 (247)
Q Consensus 102 ~i~liGhSlGg~va~~~a~ 120 (247)
+|.++|-|.||.++.-++.
T Consensus 470 riv~aGDSAGgNL~~~VaL 488 (880)
T KOG4388|consen 470 RIVLAGDSAGGNLCFTVAL 488 (880)
T ss_pred eEEEeccCCCcceeehhHH
Confidence 9999999999987755443
No 184
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=95.92 E-value=0.041 Score=50.61 Aligned_cols=109 Identities=11% Similarity=0.018 Sum_probs=63.7
Q ss_pred CCCCCCeEEEEeCCCCCCCCChH-HHHHHHHHhcCCcEEEEEcCCCCCCCCChHH------HhhcHHHHHHHHHHHHHHH
Q psy16575 21 WDPHKRNVIIIHGFNQSESQSPM-TIIRDAYIRRRDYNVFMLDFADLAPFPCYLS------SLSNTRLVAQCAAQFYSHL 93 (247)
Q Consensus 21 ~~~~~~~vv~iHG~~~~~~~~~~-~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~------~~~~~~~v~~~l~~~i~~l 93 (247)
+.+..|++|++-| -+.....+. ..+...+.++.+--|+++..|.+|.+..+.. .-.++++.-++++.|++.+
T Consensus 25 ~~~~gpifl~~gg-E~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~ 103 (434)
T PF05577_consen 25 YKPGGPIFLYIGG-EGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYV 103 (434)
T ss_dssp --TTSEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECC-CCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHH
Confidence 4555566666644 333321111 1233335566678999999999887632211 1134677788888888887
Q ss_pred HH-c-CCCCccEEEEEechhhHHHhhhhhhccCccccee
Q psy16575 94 TH-H-GASAYDIHCVGHSLGAHICGMMSNHLTHRMHKII 130 (247)
Q Consensus 94 ~~-~-~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~ 130 (247)
+. . ..+..++.++|=|.||.+|+.+-.++|+.+...+
T Consensus 104 ~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ 142 (434)
T PF05577_consen 104 KKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAW 142 (434)
T ss_dssp HHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEE
T ss_pred HHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEE
Confidence 63 3 2334589999999999999999999998765433
No 185
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.71 E-value=0.16 Score=43.11 Aligned_cols=91 Identities=19% Similarity=0.224 Sum_probs=53.0
Q ss_pred eEEEEeC-CCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHH-cCCCC--cc
Q psy16575 27 NVIIIHG-FNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTH-HGASA--YD 102 (247)
Q Consensus 27 ~vv~iHG-~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~-~~~~~--~~ 102 (247)
+|=||=| |-+..-.-.++.+.+.+. +.||.|++.-|...=+ ... -++.+.+.....++.|.+ .++.. -+
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La-~~Gy~ViAtPy~~tfD---H~~---~A~~~~~~f~~~~~~L~~~~~~~~~~lP 91 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLA-DRGYAVIATPYVVTFD---HQA---IAREVWERFERCLRALQKRGGLDPAYLP 91 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHH-hCCcEEEEEecCCCCc---HHH---HHHHHHHHHHHHHHHHHHhcCCCcccCC
Confidence 4556666 444443335777777444 4689999987754211 111 123333444444444543 23322 26
Q ss_pred EEEEEechhhHHHhhhhhhccC
Q psy16575 103 IHCVGHSLGAHICGMMSNHLTH 124 (247)
Q Consensus 103 i~liGhSlGg~va~~~a~~~~~ 124 (247)
++=||||||+-+-..++..+..
T Consensus 92 ~~~vGHSlGcklhlLi~s~~~~ 113 (250)
T PF07082_consen 92 VYGVGHSLGCKLHLLIGSLFDV 113 (250)
T ss_pred eeeeecccchHHHHHHhhhccC
Confidence 7789999999888888776643
No 186
>KOG2237|consensus
Probab=95.69 E-value=0.012 Score=55.71 Aligned_cols=107 Identities=14% Similarity=0.096 Sum_probs=66.7
Q ss_pred CCCCCeEEEEeC-CCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHH---HHHHHHcC
Q psy16575 22 DPHKRNVIIIHG-FNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQF---YSHLTHHG 97 (247)
Q Consensus 22 ~~~~~~vv~iHG-~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~---i~~l~~~~ 97 (247)
+.++|.+++.|| |..+....|-..-. .++. .|+-....|-|+++....-.........-...+.+| .+.|.+.|
T Consensus 467 dg~~P~LLygYGay~isl~p~f~~srl-~lld-~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~g 544 (712)
T KOG2237|consen 467 DGSKPLLLYGYGAYGISLDPSFRASRL-SLLD-RGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENG 544 (712)
T ss_pred cCCCceEEEEecccceeecccccccee-EEEe-cceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcC
Confidence 456899999999 55555544432222 1455 578888889998875421111111111111223333 34466666
Q ss_pred C-CCccEEEEEechhhHHHhhhhhhccCccccee
Q psy16575 98 A-SAYDIHCVGHSLGAHICGMMSNHLTHRMHKII 130 (247)
Q Consensus 98 ~-~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~ 130 (247)
+ .++++.+.|.|.||.+++.+.++.|+.++.++
T Consensus 545 yt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avi 578 (712)
T KOG2237|consen 545 YTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVI 578 (712)
T ss_pred CCCccceeEecccCccchhHHHhccCchHhhhhh
Confidence 4 67899999999999999999999987665544
No 187
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=95.47 E-value=0.052 Score=51.44 Aligned_cols=84 Identities=10% Similarity=0.087 Sum_probs=50.1
Q ss_pred HHHHHHHHhcCCc-----EEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEEEEechhhHHHhhh
Q psy16575 44 TIIRDAYIRRRDY-----NVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMM 118 (247)
Q Consensus 44 ~~l~~~~l~~~~~-----~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~ 118 (247)
..|.+ .|++.|| ....+|||...... . .-...-..+.++|+.+.+.. .-++++|||||||+.++.+.
T Consensus 159 ~kLIe-~L~~iGY~~~nL~gAPYDWRls~~~l---e---~rd~YF~rLK~lIE~ay~~n-ggkKVVLV~HSMGglv~lyF 230 (642)
T PLN02517 159 AVLIA-NLARIGYEEKNMYMAAYDWRLSFQNT---E---VRDQTLSRLKSNIELMVATN-GGKKVVVVPHSMGVLYFLHF 230 (642)
T ss_pred HHHHH-HHHHcCCCCCceeecccccccCccch---h---hhhHHHHHHHHHHHHHHHHc-CCCeEEEEEeCCchHHHHHH
Confidence 56666 4455455 34556888653221 0 01122245677777654332 13799999999999999886
Q ss_pred hhhcc---------------CcccceeeecCC
Q psy16575 119 SNHLT---------------HRMHKIIGIDPA 135 (247)
Q Consensus 119 a~~~~---------------~~v~~i~~LdPa 135 (247)
.+... +-|.+++.+.+.
T Consensus 231 L~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 231 MKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred HHhccccccccCCcchHHHHHHHHHheecccc
Confidence 65431 236777777654
No 188
>PLN02454 triacylglycerol lipase
Probab=95.23 E-value=0.034 Score=50.56 Aligned_cols=41 Identities=20% Similarity=0.202 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHH-cCCCCccEEEEEechhhHHHhhhhhhc
Q psy16575 82 VAQCAAQFYSHLTH-HGASAYDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 82 v~~~l~~~i~~l~~-~~~~~~~i~liGhSlGg~va~~~a~~~ 122 (247)
+.+++...++.+.+ ..-..-+|++.||||||.+|..+|..+
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di 249 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDI 249 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHH
Confidence 44444455555433 321112499999999999998888654
No 189
>PLN02408 phospholipase A1
Probab=95.05 E-value=0.038 Score=49.59 Aligned_cols=23 Identities=26% Similarity=0.527 Sum_probs=19.6
Q ss_pred ccEEEEEechhhHHHhhhhhhcc
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHLT 123 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~~ 123 (247)
.+|++.||||||.+|..+|..+.
T Consensus 200 ~sI~vTGHSLGGALAtLaA~dl~ 222 (365)
T PLN02408 200 LSLTITGHSLGAALATLTAYDIK 222 (365)
T ss_pred ceEEEeccchHHHHHHHHHHHHH
Confidence 36999999999999988887654
No 190
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=95.01 E-value=0.1 Score=43.77 Aligned_cols=83 Identities=20% Similarity=0.197 Sum_probs=46.7
Q ss_pred CcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhccC-------ccc
Q psy16575 55 DYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLTH-------RMH 127 (247)
Q Consensus 55 ~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~-------~v~ 127 (247)
|+++..++|+..-....-......-+.+++-++.+.+.+.+.....+++.++|+|+||.|+..+.+++.. .+.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 5788888888621100000001112333444444544454422245789999999999999888877532 344
Q ss_pred ceeeecCCCc
Q psy16575 128 KIIGIDPARP 137 (247)
Q Consensus 128 ~i~~LdPa~p 137 (247)
-+..=||..|
T Consensus 82 fVl~gnP~rp 91 (225)
T PF08237_consen 82 FVLIGNPRRP 91 (225)
T ss_pred EEEecCCCCC
Confidence 4444566665
No 191
>PLN02310 triacylglycerol lipase
Probab=94.92 E-value=0.035 Score=50.43 Aligned_cols=22 Identities=23% Similarity=0.386 Sum_probs=19.1
Q ss_pred ccEEEEEechhhHHHhhhhhhc
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~ 122 (247)
-+|++.||||||.+|..+|..+
T Consensus 209 ~sI~vTGHSLGGALAtLaA~dl 230 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYEA 230 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHHH
Confidence 4799999999999998888654
No 192
>PLN02571 triacylglycerol lipase
Probab=94.89 E-value=0.028 Score=51.17 Aligned_cols=21 Identities=33% Similarity=0.556 Sum_probs=18.4
Q ss_pred cEEEEEechhhHHHhhhhhhc
Q psy16575 102 DIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 102 ~i~liGhSlGg~va~~~a~~~ 122 (247)
+|++.||||||.+|..+|..+
T Consensus 227 sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 227 SITICGHSLGAALATLNAVDI 247 (413)
T ss_pred cEEEeccchHHHHHHHHHHHH
Confidence 699999999999998877654
No 193
>KOG2369|consensus
Probab=94.88 E-value=0.054 Score=49.71 Aligned_cols=39 Identities=10% Similarity=0.137 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHH-cCCCCccEEEEEechhhHHHhhhhhhccC
Q psy16575 84 QCAAQFYSHLTH-HGASAYDIHCVGHSLGAHICGMMSNHLTH 124 (247)
Q Consensus 84 ~~l~~~i~~l~~-~~~~~~~i~liGhSlGg~va~~~a~~~~~ 124 (247)
..++..|+.+.+ .| -+++.||+||||+.+..+..+..+.
T Consensus 166 ~kLK~~iE~~~~~~G--~kkVvlisHSMG~l~~lyFl~w~~~ 205 (473)
T KOG2369|consen 166 SKLKKKIETMYKLNG--GKKVVLISHSMGGLYVLYFLKWVEA 205 (473)
T ss_pred HHHHHHHHHHHHHcC--CCceEEEecCCccHHHHHHHhcccc
Confidence 345555555433 33 2799999999999999888776543
No 194
>KOG2931|consensus
Probab=94.86 E-value=0.2 Score=43.51 Aligned_cols=105 Identities=14% Similarity=0.223 Sum_probs=71.0
Q ss_pred CCCCeEEEEeCCCCCCCCCh-----HHHHHHHHHhcCCcEEEEEcCCCCCCC-CChHH--HhhcHHHHHHHHHHHHHHHH
Q psy16575 23 PHKRNVIIIHGFNQSESQSP-----MTIIRDAYIRRRDYNVFMLDFADLAPF-PCYLS--SLSNTRLVAQCAAQFYSHLT 94 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~-----~~~l~~~~l~~~~~~Vi~vD~~~~~~~-~~y~~--~~~~~~~v~~~l~~~i~~l~ 94 (247)
..+|++|-.|..+-+..+.+ ...++. ++.+ +.|+-+|-++.... +..+. .....+.+++++-.+++++
T Consensus 44 ~~kpaiiTyhDlglN~~scFq~ff~~p~m~e-i~~~--fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f- 119 (326)
T KOG2931|consen 44 GNKPAIITYHDLGLNHKSCFQGFFNFPDMAE-ILEH--FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHF- 119 (326)
T ss_pred CCCceEEEecccccchHhHhHHhhcCHhHHH-HHhh--eEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhc-
Confidence 35889999999877764322 122332 4443 99999998864211 11111 1234566666666666553
Q ss_pred HcCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 95 HHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 95 ~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
+ .+.|.-+|--.||.|-...|...|+||..++.+.+.
T Consensus 120 --~--lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~ 156 (326)
T KOG2931|consen 120 --G--LKSVIGMGVGAGAYILARFALNHPERVLGLVLINCD 156 (326)
T ss_pred --C--cceEEEecccccHHHHHHHHhcChhheeEEEEEecC
Confidence 4 488999999999999999999999999999887654
No 195
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=94.72 E-value=0.46 Score=44.43 Aligned_cols=100 Identities=17% Similarity=0.215 Sum_probs=70.3
Q ss_pred CCCCCCeEEEE-----eC--CCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHH
Q psy16575 21 WDPHKRNVIII-----HG--FNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHL 93 (247)
Q Consensus 21 ~~~~~~~vv~i-----HG--~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l 93 (247)
.++.++++|+| || .++-.. -..+-- .|+. |+.|+.+.|...... -+...+|....+.|++.+
T Consensus 64 ~d~~krP~vViDPRAGHGpGIGGFK~---dSevG~-AL~~-GHPvYFV~F~p~P~p------gQTl~DV~~ae~~Fv~~V 132 (581)
T PF11339_consen 64 VDPTKRPFVVIDPRAGHGPGIGGFKP---DSEVGV-ALRA-GHPVYFVGFFPEPEP------GQTLEDVMRAEAAFVEEV 132 (581)
T ss_pred CCCCCCCeEEeCCCCCCCCCccCCCc---ccHHHH-HHHc-CCCeEEEEecCCCCC------CCcHHHHHHHHHHHHHHH
Confidence 46667777777 55 222221 123332 3444 699999988765543 135678888889999987
Q ss_pred HHcCCCCccEEEEEechhhHHHhhhhhhccCcccceee
Q psy16575 94 THHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIG 131 (247)
Q Consensus 94 ~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~ 131 (247)
.+..-+..+..|||...||..+.+++...|++++-|+.
T Consensus 133 ~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvl 170 (581)
T PF11339_consen 133 AERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVL 170 (581)
T ss_pred HHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceee
Confidence 76554445999999999999999999999998887763
No 196
>KOG2385|consensus
Probab=94.45 E-value=0.038 Score=51.16 Aligned_cols=111 Identities=22% Similarity=0.275 Sum_probs=66.3
Q ss_pred HhhcHHHHHHHHHHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhcc-----CcccceeeecCCCccccccCCccccc
Q psy16575 75 SLSNTRLVAQCAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLT-----HRMHKIIGIDPARPLVDRYGDKAFRL 149 (247)
Q Consensus 75 ~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~-----~~v~~i~~LdPa~p~f~~~~~~~~rL 149 (247)
+......+++.+++.+-. ..+|. .+|+||||||||.+.......+. +-|.+++.+....|. .. ..+...
T Consensus 424 a~dRa~kaG~lLAe~L~~-r~qG~--RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~-k~--~~w~k~ 497 (633)
T KOG2385|consen 424 ALDRADKAGELLAEALCK-RSQGN--RPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT-KA--KLWLKA 497 (633)
T ss_pred HhhHHHHHHHHHHHHHHH-hccCC--CceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC-CH--HHHHHH
Confidence 334445566666665532 22443 78999999999999876555432 346677777533331 11 111011
Q ss_pred -CcCCCCeeeEEEeCCCCCCCCCcccceeeecCCCcCCCCCCC
Q psy16575 150 -TRDDANFVQVIHTNAWFLGEAPQVGHVDFCVNGGRMQPSCTK 191 (247)
Q Consensus 150 -~~~dA~~V~viht~~~~~G~~~~~g~~dfy~ngg~~qPgc~~ 191 (247)
.--.-+||.+.-++-..||+.-..-..-|=.=+|.+||-|..
T Consensus 498 r~vVsGRFVNgYs~nDW~L~~lfRa~s~~~~avaGi~~~~~i~ 540 (633)
T KOG2385|consen 498 RSVVSGRFVNGYSTNDWTLGYLFRASSAQFGAVAGIPQPICIP 540 (633)
T ss_pred HhheecceeeeeecchHHHHHHHHHhhcccccccCCCccccCC
Confidence 112368999999998777765444444554456778999954
No 197
>PLN02753 triacylglycerol lipase
Probab=94.37 E-value=0.052 Score=50.66 Aligned_cols=22 Identities=27% Similarity=0.492 Sum_probs=19.0
Q ss_pred ccEEEEEechhhHHHhhhhhhc
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~ 122 (247)
-+|++.||||||.+|..+|..+
T Consensus 312 ~sItVTGHSLGGALAtLaA~Dl 333 (531)
T PLN02753 312 LSITVTGHSLGGALAILSAYDI 333 (531)
T ss_pred ceEEEEccCHHHHHHHHHHHHH
Confidence 5899999999999998887543
No 198
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.17 E-value=0.06 Score=50.18 Aligned_cols=22 Identities=23% Similarity=0.369 Sum_probs=18.8
Q ss_pred ccEEEEEechhhHHHhhhhhhc
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~ 122 (247)
-+|++.||||||.+|..+|..+
T Consensus 318 ~SItVTGHSLGGALAtLaA~DI 339 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYEA 339 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHHH
Confidence 4799999999999998887554
No 199
>PLN00413 triacylglycerol lipase
Probab=94.14 E-value=0.065 Score=49.48 Aligned_cols=23 Identities=22% Similarity=0.341 Sum_probs=19.3
Q ss_pred CCccEEEEEechhhHHHhhhhhh
Q psy16575 99 SAYDIHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 99 ~~~~i~liGhSlGg~va~~~a~~ 121 (247)
+..++++.||||||.+|..++..
T Consensus 282 p~~kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFTAV 304 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHHHH
Confidence 34689999999999999888753
No 200
>PLN02324 triacylglycerol lipase
Probab=94.05 E-value=0.08 Score=48.20 Aligned_cols=21 Identities=38% Similarity=0.558 Sum_probs=18.4
Q ss_pred cEEEEEechhhHHHhhhhhhc
Q psy16575 102 DIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 102 ~i~liGhSlGg~va~~~a~~~ 122 (247)
+|++.||||||.+|..+|..+
T Consensus 216 sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 216 SITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred eEEEecCcHHHHHHHHHHHHH
Confidence 799999999999998887654
No 201
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=93.96 E-value=0.31 Score=40.30 Aligned_cols=66 Identities=17% Similarity=0.144 Sum_probs=37.9
Q ss_pred CcEEEEEcCCCCCCCCChH-----HHhhcHHHHHHHHHH-HHHHHHHcCCCCccEEEEEechhhHHHhhhhhhc
Q psy16575 55 DYNVFMLDFADLAPFPCYL-----SSLSNTRLVAQCAAQ-FYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 55 ~~~Vi~vD~~~~~~~~~y~-----~~~~~~~~v~~~l~~-~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~ 122 (247)
-.||+++=||...-.. +. .........-.++.. |-.+|++.+ +-.++.|+|||.|+.+...+.+..
T Consensus 45 ~~~vfAP~YRQatl~~-~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYA-FLDTDREDAEKAFDLAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CCccccChhhcchhhh-hhccCcchhHHHHHhhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHH
Confidence 3799999999754321 11 111111111123333 333355443 236899999999999998877764
No 202
>PLN02802 triacylglycerol lipase
Probab=93.90 E-value=0.091 Score=48.91 Aligned_cols=23 Identities=35% Similarity=0.621 Sum_probs=19.6
Q ss_pred ccEEEEEechhhHHHhhhhhhcc
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHLT 123 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~~ 123 (247)
-+|++.||||||.+|..++..+.
T Consensus 330 ~sI~VTGHSLGGALAtLaA~dL~ 352 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADELA 352 (509)
T ss_pred ceEEEeccchHHHHHHHHHHHHH
Confidence 37999999999999988887653
No 203
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=93.77 E-value=0.21 Score=41.55 Aligned_cols=76 Identities=20% Similarity=0.369 Sum_probs=47.5
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcE-EEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccE
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYN-VFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDI 103 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~-Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i 103 (247)
+.+||+.-||+.+.+ ....+. ...++. +++.||+..... . . +. ..++|
T Consensus 11 ~~LilfF~GWg~d~~--~f~hL~----~~~~~D~l~~yDYr~l~~d--~------------~-------~~----~y~~i 59 (213)
T PF04301_consen 11 KELILFFAGWGMDPS--PFSHLI----LPENYDVLICYDYRDLDFD--F------------D-------LS----GYREI 59 (213)
T ss_pred CeEEEEEecCCCChH--Hhhhcc----CCCCccEEEEecCcccccc--c------------c-------cc----cCceE
Confidence 579999999998773 233321 122344 456788866432 0 0 10 23799
Q ss_pred EEEEechhhHHHhhhhhhccCcccceeeec
Q psy16575 104 HCVGHSLGAHICGMMSNHLTHRMHKIIGID 133 (247)
Q Consensus 104 ~liGhSlGg~va~~~a~~~~~~v~~i~~Ld 133 (247)
+||++|||-.+|..+.+.. ++.+-+++.
T Consensus 60 ~lvAWSmGVw~A~~~l~~~--~~~~aiAIN 87 (213)
T PF04301_consen 60 YLVAWSMGVWAANRVLQGI--PFKRAIAIN 87 (213)
T ss_pred EEEEEeHHHHHHHHHhccC--CcceeEEEE
Confidence 9999999999987765543 355556654
No 204
>KOG2183|consensus
Probab=93.70 E-value=0.46 Score=43.21 Aligned_cols=112 Identities=12% Similarity=0.126 Sum_probs=69.0
Q ss_pred CCCCCCeEEEEeCCCCCCC-----CChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHH-hh--------cHHHHHHHH
Q psy16575 21 WDPHKRNVIIIHGFNQSES-----QSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSS-LS--------NTRLVAQCA 86 (247)
Q Consensus 21 ~~~~~~~vv~iHG~~~~~~-----~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~-~~--------~~~~v~~~l 86 (247)
+.+...+|++--|--++.. ..++..++ .+.+.-++.+..|.++++..+... .. +.++.-.+.
T Consensus 76 w~~g~gPIffYtGNEGdie~Fa~ntGFm~D~A----p~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADf 151 (492)
T KOG2183|consen 76 WKKGEGPIFFYTGNEGDIEWFANNTGFMWDLA----PELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADF 151 (492)
T ss_pred ccCCCCceEEEeCCcccHHHHHhccchHHhhh----HhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHH
Confidence 3444467888878655542 12233333 344577888899988766333221 11 234444556
Q ss_pred HHHHHHHHH-cCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCCcc
Q psy16575 87 AQFYSHLTH-HGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPARPL 138 (247)
Q Consensus 87 ~~~i~~l~~-~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~p~ 138 (247)
+.+|..|++ .+....+|..+|-|.||.+|+..-.++|.-+.. +|....|.
T Consensus 152 A~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~G--AlAaSAPv 202 (492)
T KOG2183|consen 152 AELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLG--ALAASAPV 202 (492)
T ss_pred HHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhh--hhhccCce
Confidence 666666653 444557899999999999999998888864432 34444554
No 205
>PLN02162 triacylglycerol lipase
Probab=93.61 E-value=0.09 Score=48.49 Aligned_cols=22 Identities=23% Similarity=0.410 Sum_probs=18.5
Q ss_pred CccEEEEEechhhHHHhhhhhh
Q psy16575 100 AYDIHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 100 ~~~i~liGhSlGg~va~~~a~~ 121 (247)
..++++.||||||.+|..++..
T Consensus 277 ~~kliVTGHSLGGALAtLaAa~ 298 (475)
T PLN02162 277 NLKYILTGHSLGGALAALFPAI 298 (475)
T ss_pred CceEEEEecChHHHHHHHHHHH
Confidence 3689999999999999777543
No 206
>PLN02847 triacylglycerol lipase
Probab=93.59 E-value=0.13 Score=48.88 Aligned_cols=22 Identities=36% Similarity=0.681 Sum_probs=19.2
Q ss_pred ccEEEEEechhhHHHhhhhhhc
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~ 122 (247)
-++.++||||||.+|..++..+
T Consensus 251 YkLVITGHSLGGGVAALLAilL 272 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYIL 272 (633)
T ss_pred CeEEEeccChHHHHHHHHHHHH
Confidence 4899999999999998887665
No 207
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=93.35 E-value=0.21 Score=43.26 Aligned_cols=104 Identities=13% Similarity=0.221 Sum_probs=61.2
Q ss_pred CCCeEEEEeCCCCCCCCChH-----HHHHHHHHhcCCcEEEEEcCCCCCCC-CChHH--HhhcHHHHHHHHHHHHHHHHH
Q psy16575 24 HKRNVIIIHGFNQSESQSPM-----TIIRDAYIRRRDYNVFMLDFADLAPF-PCYLS--SLSNTRLVAQCAAQFYSHLTH 95 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~-----~~l~~~~l~~~~~~Vi~vD~~~~~~~-~~y~~--~~~~~~~v~~~l~~~i~~l~~ 95 (247)
++|++|-.|-.+-+..+.+. ..+. .+.+ .+.|+=+|-++.... +..+. .....+.+++.+..+++++
T Consensus 22 ~kp~ilT~HDvGlNh~scF~~ff~~~~m~--~i~~-~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f-- 96 (283)
T PF03096_consen 22 NKPAILTYHDVGLNHKSCFQGFFNFEDMQ--EILQ-NFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHF-- 96 (283)
T ss_dssp TS-EEEEE--TT--HHHHCHHHHCSHHHH--HHHT-TSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHH--
T ss_pred CCceEEEeccccccchHHHHHHhcchhHH--HHhh-ceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhC--
Confidence 58999999998776543111 1122 2233 499999999975321 01111 1234566666666666554
Q ss_pred cCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCC
Q psy16575 96 HGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 96 ~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
++ +.+.-+|--.||.|-..+|..+|++|..++.+.|.
T Consensus 97 -~l--k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~ 133 (283)
T PF03096_consen 97 -GL--KSVIGFGVGAGANILARFALKHPERVLGLILVNPT 133 (283)
T ss_dssp -T-----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES--
T ss_pred -Cc--cEEEEEeeccchhhhhhccccCccceeEEEEEecC
Confidence 44 78999999999999999999999999999988875
No 208
>PLN02719 triacylglycerol lipase
Probab=93.22 E-value=0.1 Score=48.68 Aligned_cols=22 Identities=27% Similarity=0.495 Sum_probs=18.9
Q ss_pred ccEEEEEechhhHHHhhhhhhc
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~ 122 (247)
-+|++.||||||.+|..+|..+
T Consensus 298 ~sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHHH
Confidence 4799999999999998877654
No 209
>PLN02934 triacylglycerol lipase
Probab=92.70 E-value=0.14 Score=47.67 Aligned_cols=23 Identities=22% Similarity=0.354 Sum_probs=19.2
Q ss_pred CCccEEEEEechhhHHHhhhhhh
Q psy16575 99 SAYDIHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 99 ~~~~i~liGhSlGg~va~~~a~~ 121 (247)
+..++++.||||||.+|..++..
T Consensus 319 p~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 319 KNAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred CCCeEEEeccccHHHHHHHHHHH
Confidence 34689999999999999887643
No 210
>PLN02761 lipase class 3 family protein
Probab=92.49 E-value=0.19 Score=46.99 Aligned_cols=22 Identities=32% Similarity=0.502 Sum_probs=18.8
Q ss_pred ccEEEEEechhhHHHhhhhhhc
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~ 122 (247)
-+|++.||||||.+|..+|..+
T Consensus 294 ~sItVTGHSLGGALAtLaA~DI 315 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYDI 315 (527)
T ss_pred ceEEEeccchHHHHHHHHHHHH
Confidence 4799999999999998887654
No 211
>KOG2029|consensus
Probab=92.18 E-value=0.17 Score=47.84 Aligned_cols=61 Identities=16% Similarity=0.269 Sum_probs=40.1
Q ss_pred CcEEEEEcCCCCCCC-CChHHHhhcHHHHHHHHHHHHHHHHHcCCC-CccEEEEEechhhHHH
Q psy16575 55 DYNVFMLDFADLAPF-PCYLSSLSNTRLVAQCAAQFYSHLTHHGAS-AYDIHCVGHSLGAHIC 115 (247)
Q Consensus 55 ~~~Vi~vD~~~~~~~-~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~-~~~i~liGhSlGg~va 115 (247)
+.++|.++|+..-.. ..+-.+....+.++....++++.|.+.++. -..|..|||||||.++
T Consensus 478 ~~Rii~l~Y~Tsit~w~~~~p~e~~r~sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~ 540 (697)
T KOG2029|consen 478 KSRIIGLEYTTSITDWRARCPAEAHRRSLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLA 540 (697)
T ss_pred cceEEEeecccchhhhcccCcccchhhHHHHHHHHHHHHHHHhccCCCCceEEEecccchHHH
Confidence 357777776642110 011122334556667777888888887775 5689999999999888
No 212
>KOG2551|consensus
Probab=92.04 E-value=0.4 Score=39.98 Aligned_cols=92 Identities=20% Similarity=0.252 Sum_probs=48.0
Q ss_pred CCCeEEEEeCCCCCCCC--ChHHHHHHHHHhcCCcEEEEEcCCC------CCCC--------C------ChHHHhhc---
Q psy16575 24 HKRNVIIIHGFNQSESQ--SPMTIIRDAYIRRRDYNVFMLDFAD------LAPF--------P------CYLSSLSN--- 78 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~--~~~~~l~~~~l~~~~~~Vi~vD~~~------~~~~--------~------~y~~~~~~--- 78 (247)
.++-|+.+|||..+... .-...+++ ++++. +..+.+|-+- .... + .|..-..+
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK-~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~ 81 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRK-LLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEAS 81 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHH-HHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccc
Confidence 46789999999998742 11223444 44444 6666555331 0000 0 01110001
Q ss_pred ---HHHHHHHHHHHHHHHHHcCCCCccEEEEEechhhHHHhhhhh
Q psy16575 79 ---TRLVAQCAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSN 120 (247)
Q Consensus 79 ---~~~v~~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~ 120 (247)
.....+.++-+.+.+.+.| +. =-|+|+|.||.++++++.
T Consensus 82 ~~~~~~~eesl~yl~~~i~enG-PF--DGllGFSQGA~laa~l~~ 123 (230)
T KOG2551|consen 82 FTEYFGFEESLEYLEDYIKENG-PF--DGLLGFSQGAALAALLAG 123 (230)
T ss_pred cccccChHHHHHHHHHHHHHhC-CC--ccccccchhHHHHHHhhc
Confidence 1111223444444455555 22 248999999999988876
No 213
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=90.82 E-value=1 Score=34.26 Aligned_cols=33 Identities=18% Similarity=0.315 Sum_probs=24.5
Q ss_pred CCCCCCeEEEEeCCCCCCCCChHHHHHHHHHhc
Q psy16575 21 WDPHKRNVIIIHGFNQSESQSPMTIIRDAYIRR 53 (247)
Q Consensus 21 ~~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~ 53 (247)
-++.+|+|+-+|||+|.+.....+.|++.+..+
T Consensus 48 ~~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~ 80 (127)
T PF06309_consen 48 PNPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKS 80 (127)
T ss_pred CCCCCCEEEEeecCCCCcHHHHHHHHHHHHHhc
Confidence 368899999999999999764445566654443
No 214
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=90.80 E-value=1.8 Score=39.11 Aligned_cols=96 Identities=15% Similarity=0.198 Sum_probs=54.9
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHH-----------------HH-HhcCCcEEEEEcCCCCCCCCChHH----HhhcHH
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRD-----------------AY-IRRRDYNVFMLDFADLAPFPCYLS----SLSNTR 80 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~-----------------~~-l~~~~~~Vi~vD~~~~~~~~~y~~----~~~~~~ 80 (247)
.++|++|++.|-.+..+ .+-.+.+ .+ ..+ -.|++-+|.+-.... .|.. ...+.+
T Consensus 38 ~~~Pl~~wlnGGPG~SS--~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~-~an~l~iD~PvGtGf-S~~~~~~~~~~~~~ 113 (415)
T PF00450_consen 38 EDDPLILWLNGGPGCSS--MWGLFGENGPFRINPDGPYTLEDNPYSWNK-FANLLFIDQPVGTGF-SYGNDPSDYVWNDD 113 (415)
T ss_dssp CSS-EEEEEE-TTTB-T--HHHHHCTTSSEEEETTSTSEEEE-TT-GGG-TSEEEEE--STTSTT--EESSGGGGS-SHH
T ss_pred CCccEEEEecCCceecc--ccccccccCceEEeeccccccccccccccc-ccceEEEeecCceEE-eeccccccccchhh
Confidence 46799999999888763 2211100 00 011 268999998754332 1322 223567
Q ss_pred HHHHHHHHHHHH-HHHc-CCCCccEEEEEechhhHHHhhhhhhc
Q psy16575 81 LVAQCAAQFYSH-LTHH-GASAYDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 81 ~v~~~l~~~i~~-l~~~-~~~~~~i~liGhSlGg~va~~~a~~~ 122 (247)
.+++++.++|.. +.+. .....+++|.|-|.||+-+-.++..+
T Consensus 114 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i 157 (415)
T PF00450_consen 114 QAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYI 157 (415)
T ss_dssp HHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhh
Confidence 888888888776 3432 23335899999999999886666553
No 215
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=90.16 E-value=0.61 Score=44.25 Aligned_cols=106 Identities=15% Similarity=0.141 Sum_probs=71.2
Q ss_pred CCCeEEEEeC-CCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCC-ChHHHh--hcHHHHHHHHHHHHHHHHHcCC-
Q psy16575 24 HKRNVIIIHG-FNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFP-CYLSSL--SNTRLVAQCAAQFYSHLTHHGA- 98 (247)
Q Consensus 24 ~~~~vv~iHG-~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~-~y~~~~--~~~~~v~~~l~~~i~~l~~~~~- 98 (247)
.+||+|+--| |.-+-. ..+...+..+|+++ ...+..+.|+.+... .+.++. .+-..+-++...+.+.|.+.|+
T Consensus 420 ~~pTll~aYGGF~vslt-P~fs~~~~~WLerG-g~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgit 497 (648)
T COG1505 420 ENPTLLYAYGGFNISLT-PRFSGSRKLWLERG-GVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGIT 497 (648)
T ss_pred CCceEEEeccccccccC-CccchhhHHHHhcC-CeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCC
Confidence 4677766665 332322 23333335688886 556667999988662 222222 2334556677777777777776
Q ss_pred CCccEEEEEechhhHHHhhhhhhccCcccceee
Q psy16575 99 SAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIG 131 (247)
Q Consensus 99 ~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~ 131 (247)
.++++-+-|-|-||.+.+.+.-+.|+.++.++.
T Consensus 498 spe~lgi~GgSNGGLLvg~alTQrPelfgA~v~ 530 (648)
T COG1505 498 SPEKLGIQGGSNGGLLVGAALTQRPELFGAAVC 530 (648)
T ss_pred CHHHhhhccCCCCceEEEeeeccChhhhCceee
Confidence 679999999999999999988888987777654
No 216
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=88.97 E-value=0.31 Score=32.34 Aligned_cols=38 Identities=18% Similarity=0.192 Sum_probs=17.1
Q ss_pred CCCceEEecCCCCccc-cCCCCCCCCeEEEEeCCCCCCC
Q psy16575 2 HGTKTRINILKSNSLK-YAGWDPHKRNVIIIHGFNQSES 39 (247)
Q Consensus 2 ~~~g~~i~~~~~~~l~-~s~~~~~~~~vv~iHG~~~~~~ 39 (247)
|.||-.|.+---..-. .......+|+|++.||+.++..
T Consensus 19 T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~ 57 (63)
T PF04083_consen 19 TEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSD 57 (63)
T ss_dssp -TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GG
T ss_pred eCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChH
Confidence 5566655443211111 2334567899999999888774
No 217
>KOG3253|consensus
Probab=88.93 E-value=0.72 Score=43.88 Aligned_cols=101 Identities=16% Similarity=0.102 Sum_probs=58.0
Q ss_pred CCCeEEEEeCCCCC-CCCChHHHHHHHHHhc--CCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHH--HH-HcC
Q psy16575 24 HKRNVIIIHGFNQS-ESQSPMTIIRDAYIRR--RDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSH--LT-HHG 97 (247)
Q Consensus 24 ~~~~vv~iHG~~~~-~~~~~~~~l~~~~l~~--~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~--l~-~~~ 97 (247)
..|.+|++||.... ...+|+..... .+.. +-..|-.+|++..... .++....+.+..+... ++ ...
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs-~lsl~gevvev~tfdl~n~igG-------~nI~h~ae~~vSf~r~kvlei~ge 246 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQS-RLSLKGEVVEVPTFDLNNPIGG-------ANIKHAAEYSVSFDRYKVLEITGE 246 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHH-HHhhhceeeeeccccccCCCCC-------cchHHHHHHHHHHhhhhhhhhhcc
Confidence 46899999996611 11223222222 2221 2266777887754332 3455566666666653 22 223
Q ss_pred CCCccEEEEEechhhHHHhhhhhhcc-Ccccceeee
Q psy16575 98 ASAYDIHCVGHSLGAHICGMMSNHLT-HRMHKIIGI 132 (247)
Q Consensus 98 ~~~~~i~liGhSlGg~va~~~a~~~~-~~v~~i~~L 132 (247)
++...|.|+|.|||+.|+..+.-.-. ..|..++-|
T Consensus 247 fpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCi 282 (784)
T KOG3253|consen 247 FPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCI 282 (784)
T ss_pred CCCCceEEEecccCceeeEEeccccCCceEEEEEEe
Confidence 46689999999999988877654322 235555544
No 218
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=88.16 E-value=0.63 Score=40.37 Aligned_cols=25 Identities=28% Similarity=0.454 Sum_probs=22.2
Q ss_pred CCccEEEEEechhhHHHhhhhhhcc
Q psy16575 99 SAYDIHCVGHSLGAHICGMMSNHLT 123 (247)
Q Consensus 99 ~~~~i~liGhSlGg~va~~~a~~~~ 123 (247)
+..+|.|-||||||.+|..++..+.
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 274 PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC
Confidence 4579999999999999999998874
No 219
>KOG4540|consensus
Probab=88.16 E-value=0.63 Score=40.37 Aligned_cols=25 Identities=28% Similarity=0.454 Sum_probs=22.2
Q ss_pred CCccEEEEEechhhHHHhhhhhhcc
Q psy16575 99 SAYDIHCVGHSLGAHICGMMSNHLT 123 (247)
Q Consensus 99 ~~~~i~liGhSlGg~va~~~a~~~~ 123 (247)
+..+|.|-||||||.+|..++..+.
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 274 PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC
Confidence 4579999999999999999998874
No 220
>KOG4569|consensus
Probab=86.33 E-value=0.95 Score=40.35 Aligned_cols=22 Identities=36% Similarity=0.681 Sum_probs=19.4
Q ss_pred ccEEEEEechhhHHHhhhhhhc
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~ 122 (247)
-+|.+-||||||.+|..++..+
T Consensus 171 ~~i~vTGHSLGgAlA~laa~~i 192 (336)
T KOG4569|consen 171 YSIWVTGHSLGGALASLAALDL 192 (336)
T ss_pred cEEEEecCChHHHHHHHHHHHH
Confidence 5899999999999998888764
No 221
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=84.79 E-value=4.1 Score=34.06 Aligned_cols=80 Identities=14% Similarity=0.271 Sum_probs=46.6
Q ss_pred eEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCC-ccEEE
Q psy16575 27 NVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASA-YDIHC 105 (247)
Q Consensus 27 ~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~-~~i~l 105 (247)
++|+|=||.+.... ......+.|.+ .|++++.+--+..... ... +.+...+..+++.+.+..... .++.+
T Consensus 1 plvvl~gW~gA~~~-hl~KY~~~Y~~-~g~~il~~~~~~~~~~--~~~-----~~~~~~~~~l~~~l~~~~~~~~~~il~ 71 (240)
T PF05705_consen 1 PLVVLLGWMGAKPK-HLAKYSDLYQD-PGFDILLVTSPPADFF--WPS-----KRLAPAADKLLELLSDSQSASPPPILF 71 (240)
T ss_pred CEEEEEeCCCCCHH-HHHHHHHHHHh-cCCeEEEEeCCHHHHe--eec-----cchHHHHHHHHHHhhhhccCCCCCEEE
Confidence 46788899977654 34444554555 6799999864432211 000 233334444555554433222 38999
Q ss_pred EEechhhHHH
Q psy16575 106 VGHSLGAHIC 115 (247)
Q Consensus 106 iGhSlGg~va 115 (247)
-.+|.||...
T Consensus 72 H~FSnGG~~~ 81 (240)
T PF05705_consen 72 HSFSNGGSFL 81 (240)
T ss_pred EEEECchHHH
Confidence 9999977555
No 222
>KOG2182|consensus
Probab=84.20 E-value=9.8 Score=35.57 Aligned_cols=104 Identities=12% Similarity=0.047 Sum_probs=67.0
Q ss_pred CCCCCeEEEEeC-CCCCCCCCh----HHHHHHHHHhcCCcEEEEEcCCCCCCCCChH------HHhhcHHHHHHHHHHHH
Q psy16575 22 DPHKRNVIIIHG-FNQSESQSP----MTIIRDAYIRRRDYNVFMLDFADLAPFPCYL------SSLSNTRLVAQCAAQFY 90 (247)
Q Consensus 22 ~~~~~~vv~iHG-~~~~~~~~~----~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~------~~~~~~~~v~~~l~~~i 90 (247)
.++.|..++|-| +..+. .| ...+.. +.++-|..|+.+..|-++.+.... -......+.-.+++.+|
T Consensus 83 ~~~gPiFLmIGGEgp~~~--~wv~~~~~~~~~-~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI 159 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESD--KWVGNENLTWLQ-WAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFI 159 (514)
T ss_pred cCCCceEEEEcCCCCCCC--CccccCcchHHH-HHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHH
Confidence 345677777777 33331 12 112222 556678999999999877542111 11123455666788888
Q ss_pred HHHH-HcCCCC-ccEEEEEechhhHHHhhhhhhccCcccc
Q psy16575 91 SHLT-HHGASA-YDIHCVGHSLGAHICGMMSNHLTHRMHK 128 (247)
Q Consensus 91 ~~l~-~~~~~~-~~i~liGhSlGg~va~~~a~~~~~~v~~ 128 (247)
+.+. +.+... .+....|-|.-|.+++.+-+.+|+.+-.
T Consensus 160 ~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~G 199 (514)
T KOG2182|consen 160 KAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVG 199 (514)
T ss_pred HHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhhee
Confidence 8876 344432 4899999999999999999999985543
No 223
>KOG4389|consensus
Probab=84.07 E-value=1.9 Score=40.19 Aligned_cols=86 Identities=17% Similarity=0.127 Sum_probs=51.6
Q ss_pred eEEEEeC---CCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCC----CChHHHhhcHHHHHHHHH--HHHHHHHHcC
Q psy16575 27 NVIIIHG---FNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPF----PCYLSSLSNTRLVAQCAA--QFYSHLTHHG 97 (247)
Q Consensus 27 ~vv~iHG---~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~----~~y~~~~~~~~~v~~~l~--~~i~~l~~~~ 97 (247)
++|.|-| |.++.+-..+.. +.+.+++..-|+.++||-.+-- +.-..+..|.-...++|+ ++-+.+..+|
T Consensus 137 VlVWiyGGGF~sGt~SLdvYdG--k~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aFG 214 (601)
T KOG4389|consen 137 VLVWIYGGGFYSGTPSLDVYDG--KFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLALQWVQENIAAFG 214 (601)
T ss_pred EEEEEEcCccccCCcceeeecc--ceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHHHHHHHHhHHHhC
Confidence 5777887 555554333322 2233455577777888854311 112244555555555443 3334466788
Q ss_pred CCCccEEEEEechhhHH
Q psy16575 98 ASAYDIHCVGHSLGAHI 114 (247)
Q Consensus 98 ~~~~~i~liGhSlGg~v 114 (247)
-++++|.|+|-|.||.-
T Consensus 215 Gnp~~vTLFGESAGaAS 231 (601)
T KOG4389|consen 215 GNPSRVTLFGESAGAAS 231 (601)
T ss_pred CCcceEEEeccccchhh
Confidence 89999999999999843
No 224
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=83.25 E-value=14 Score=34.58 Aligned_cols=90 Identities=16% Similarity=0.136 Sum_probs=58.5
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEE-cCCCCCCCCChHHHhhcHHHHHHHHHHHHHH-HHHcCCCCc
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFML-DFADLAPFPCYLSSLSNTRLVAQCAAQFYSH-LTHHGASAY 101 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~v-D~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~-l~~~~~~~~ 101 (247)
+.|+.|+.-|+......+-+..| ++-+.-.+++ |-|-.+.. -|... +...+.+.+.|+. |..+|.+.+
T Consensus 288 KPPL~VYFSGyR~aEGFEgy~MM-----k~Lg~PfLL~~DpRleGGa-FYlGs----~eyE~~I~~~I~~~L~~LgF~~~ 357 (511)
T TIGR03712 288 KPPLNVYFSGYRPAEGFEGYFMM-----KRLGAPFLLIGDPRLEGGA-FYLGS----DEYEQGIINVIQEKLDYLGFDHD 357 (511)
T ss_pred CCCeEEeeccCcccCcchhHHHH-----HhcCCCeEEeeccccccce-eeeCc----HHHHHHHHHHHHHHHHHhCCCHH
Confidence 45789999998885543222222 2334555554 55543333 24432 2234455555655 677899889
Q ss_pred cEEEEEechhhHHHhhhhhhcc
Q psy16575 102 DIHCVGHSLGAHICGMMSNHLT 123 (247)
Q Consensus 102 ~i~liGhSlGg~va~~~a~~~~ 123 (247)
++.|-|-|||-.=|.|++..+.
T Consensus 358 qLILSGlSMGTfgAlYYga~l~ 379 (511)
T TIGR03712 358 QLILSGLSMGTFGALYYGAKLS 379 (511)
T ss_pred HeeeccccccchhhhhhcccCC
Confidence 9999999999999999988774
No 225
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=80.29 E-value=15 Score=29.93 Aligned_cols=41 Identities=22% Similarity=0.410 Sum_probs=31.3
Q ss_pred CCCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEc
Q psy16575 21 WDPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLD 62 (247)
Q Consensus 21 ~~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD 62 (247)
....++.+|++-|..+++.+..-..+.+ .|.+.|++++.+|
T Consensus 18 ~~~~~~~viW~TGLSGsGKSTiA~ale~-~L~~~G~~~y~LD 58 (197)
T COG0529 18 LKGQKGAVIWFTGLSGSGKSTIANALEE-KLFAKGYHVYLLD 58 (197)
T ss_pred HhCCCCeEEEeecCCCCCHHHHHHHHHH-HHHHcCCeEEEec
Confidence 3456789999999999987644455554 5555689999999
No 226
>smart00037 CNX Connexin homologues. Connexin channels participate in the regulation of signaling between developing and differentiated cell types.
Probab=79.97 E-value=1.2 Score=25.48 Aligned_cols=26 Identities=31% Similarity=0.415 Sum_probs=14.8
Q ss_pred eeecCCCcCCCCCCCcccccccccccccc
Q psy16575 177 DFCVNGGRMQPSCTKEGRMIRRARCSHFM 205 (247)
Q Consensus 177 dfy~ngg~~qPgc~~~~~~~~~~~CsH~r 205 (247)
+|-=| +.||||..- -.......||.|
T Consensus 9 ~FvCn--T~QPGC~nv-CyD~~fPiSh~R 34 (34)
T smart00037 9 DFVCN--TQQPGCENV-CYDQAFPISHVR 34 (34)
T ss_pred hceec--CCCCCccce-eccccccCccCC
Confidence 45444 579999642 112224577776
No 227
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=79.17 E-value=24 Score=30.45 Aligned_cols=41 Identities=20% Similarity=0.216 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhc
Q psy16575 82 VAQCAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 82 v~~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~ 122 (247)
+...+.....+|.+.-.+.++|.|+|+|=||..|..++...
T Consensus 73 ~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 73 IEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred hHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 44555555555533223457899999999999998777664
No 228
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=79.02 E-value=18 Score=31.40 Aligned_cols=84 Identities=15% Similarity=0.192 Sum_probs=47.7
Q ss_pred HHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHH-HHHHHcCC-CCccEEEEEechhhHHHhhhhhhc---cC
Q psy16575 50 YIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFY-SHLTHHGA-SAYDIHCVGHSLGAHICGMMSNHL---TH 124 (247)
Q Consensus 50 ~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i-~~l~~~~~-~~~~i~liGhSlGg~va~~~a~~~---~~ 124 (247)
|+..++..++++-|+....-..+..........++.|-+-+ +.+...-- .--+++|.|-|||+.-+..+-... ..
T Consensus 56 ~l~~GD~A~va~QYSylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~ 135 (289)
T PF10081_consen 56 YLYGGDVAIVAMQYSYLPSWLSFLVDRDAAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRD 135 (289)
T ss_pred HHhCCCeEEEEeccccccchHHHhcccchHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhh
Confidence 77888999999999877543334333333444444443333 22333211 124799999999997664433322 23
Q ss_pred cccceeeec
Q psy16575 125 RMHKIIGID 133 (247)
Q Consensus 125 ~v~~i~~Ld 133 (247)
++...+-..
T Consensus 136 ~vdGalw~G 144 (289)
T PF10081_consen 136 RVDGALWVG 144 (289)
T ss_pred hcceEEEeC
Confidence 454444443
No 229
>PF03283 PAE: Pectinacetylesterase
Probab=78.53 E-value=4.3 Score=36.62 Aligned_cols=56 Identities=16% Similarity=0.203 Sum_probs=36.3
Q ss_pred HHHHHHHHHHcCC-CCccEEEEEechhhHHHhhhhhhccCccc---ceeeecCCCccccc
Q psy16575 86 AAQFYSHLTHHGA-SAYDIHCVGHSLGAHICGMMSNHLTHRMH---KIIGIDPARPLVDR 141 (247)
Q Consensus 86 l~~~i~~l~~~~~-~~~~i~liGhSlGg~va~~~a~~~~~~v~---~i~~LdPa~p~f~~ 141 (247)
+..+++.|...++ +.++|.|.|.|.||.-+...+..+.+++. ++.++.-++..+..
T Consensus 140 ~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d~ 199 (361)
T PF03283_consen 140 LRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLDN 199 (361)
T ss_pred HHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccccc
Confidence 4445555554443 45899999999999888766655433333 56677667666543
No 230
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=75.90 E-value=1.6 Score=32.55 Aligned_cols=18 Identities=22% Similarity=0.473 Sum_probs=9.7
Q ss_pred CCCCCeEEEEeCCCCCCC
Q psy16575 22 DPHKRNVIIIHGFNQSES 39 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~ 39 (247)
+++..++|++|||.++.-
T Consensus 89 ~~~aiPLll~HGWPgSf~ 106 (112)
T PF06441_consen 89 RPNAIPLLLLHGWPGSFL 106 (112)
T ss_dssp -TT-EEEEEE--SS--GG
T ss_pred CCCCeEEEEECCCCccHH
Confidence 455679999999999873
No 231
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=73.82 E-value=6 Score=37.04 Aligned_cols=41 Identities=20% Similarity=0.144 Sum_probs=37.9
Q ss_pred cCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 96 HGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 96 ~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
++..++.-+..|-|-||.-++.+++++|+-...|++-.||.
T Consensus 110 Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 110 YGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAI 150 (474)
T ss_pred hCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchH
Confidence 56677899999999999999999999999999999999985
No 232
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=73.32 E-value=11 Score=28.87 Aligned_cols=39 Identities=21% Similarity=0.428 Sum_probs=23.1
Q ss_pred CCCCeEEEEeC--CCCCCC----------CChHHHHHH---------HHHhcCCcEEEEE
Q psy16575 23 PHKRNVIIIHG--FNQSES----------QSPMTIIRD---------AYIRRRDYNVFML 61 (247)
Q Consensus 23 ~~~~~vv~iHG--~~~~~~----------~~~~~~l~~---------~~l~~~~~~Vi~v 61 (247)
+...++||+|| |.++.- +.|...+.. .-|++.|+.|++|
T Consensus 55 ~~y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvV 114 (150)
T COG3727 55 PKYRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVV 114 (150)
T ss_pred cCceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEE
Confidence 34579999999 544421 123333221 1366678999887
No 233
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=71.66 E-value=17 Score=28.62 Aligned_cols=71 Identities=18% Similarity=0.180 Sum_probs=39.5
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCC----CCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCC
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFA----DLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGA 98 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~----~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~ 98 (247)
++.+|++-|..+++.+..-..+.+ .|...|++|+.+|=. +......|. ..+-....+.++++-..|...|.
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~-~L~~~g~~~~~LDgD~lR~~l~~dl~fs--~~dR~e~~rr~~~~A~ll~~~G~ 75 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALER-RLFARGIKVYLLDGDNLRHGLNADLGFS--KEDREENIRRIAEVAKLLADQGI 75 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHH-HHHHTTS-EEEEEHHHHCTTTTTT--SS--HHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCEEEEEECCCCCCHHHHHHHHHH-HHHHcCCcEEEecCcchhhccCCCCCCC--HHHHHHHHHHHHHHHHHHHhCCC
Confidence 478999999999987544455555 555567999999822 122221221 11222333455665555666554
No 234
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=68.65 E-value=14 Score=27.66 Aligned_cols=39 Identities=18% Similarity=0.263 Sum_probs=24.0
Q ss_pred CCCCeEEEEeC--CCCCCC---------CC-h---------HHHHHHHHHhcCCcEEEEE
Q psy16575 23 PHKRNVIIIHG--FNQSES---------QS-P---------MTIIRDAYIRRRDYNVFML 61 (247)
Q Consensus 23 ~~~~~vv~iHG--~~~~~~---------~~-~---------~~~l~~~~l~~~~~~Vi~v 61 (247)
+...++|+||| |.+... .+ | ......++|+..|+.|+.+
T Consensus 54 ~~~klaIfVDGcfWHgh~c~~~~~pk~n~~fW~~Ki~~n~~rD~~~~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 54 DEYRCVIFIHGCFWHGHHCYLGKVPKTRTDFWSPKIEKNVERDRRVNSRLQELGWRVLRV 113 (117)
T ss_pred cCCCEEEEEcccccccCCcccccCCCccHHHHHHHHHHHHHHHHHHHHHHHHCcCEEEEE
Confidence 45789999999 343211 01 1 1223455788889999876
No 235
>KOG1202|consensus
Probab=68.61 E-value=23 Score=37.18 Aligned_cols=98 Identities=14% Similarity=0.208 Sum_probs=55.8
Q ss_pred CCCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCC
Q psy16575 21 WDPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASA 100 (247)
Q Consensus 21 ~~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~ 100 (247)
-....|+++|+|-.-+... ....+++ +-.+-.+.+...... ....++.++ +-+|+.+++.. +.
T Consensus 2119 ~~se~~~~Ffv~pIEG~tt--~l~~la~----rle~PaYglQ~T~~v-------P~dSies~A---~~yirqirkvQ-P~ 2181 (2376)
T KOG1202|consen 2119 VQSEEPPLFFVHPIEGFTT--ALESLAS----RLEIPAYGLQCTEAV-------PLDSIESLA---AYYIRQIRKVQ-PE 2181 (2376)
T ss_pred hcccCCceEEEeccccchH--HHHHHHh----hcCCcchhhhccccC-------CcchHHHHH---HHHHHHHHhcC-CC
Confidence 3456789999998776652 3444443 222222222111111 111233333 33455555433 34
Q ss_pred ccEEEEEechhhHHHhhhhhhccC--cccceeeecCC
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHLTH--RMHKIIGIDPA 135 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~~~--~v~~i~~LdPa 135 (247)
-+.+|+|+|.|+-++-.++..+.+ ....++.||-+
T Consensus 2182 GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2182 GPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred CCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 689999999999999888876643 23458889966
No 236
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=65.68 E-value=16 Score=24.76 Aligned_cols=39 Identities=18% Similarity=0.348 Sum_probs=25.7
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEE--cCCCC
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFML--DFADL 66 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~v--D~~~~ 66 (247)
..|.+++|||-...+ ...++..+.++.++.++.+ ||..+
T Consensus 30 ~~~~~~lvhGga~~G----aD~iA~~wA~~~gv~~~~~~adW~~h 70 (71)
T PF10686_consen 30 RHPDMVLVHGGAPKG----ADRIAARWARERGVPVIRFPADWQRH 70 (71)
T ss_pred hCCCEEEEECCCCCC----HHHHHHHHHHHCCCeeEEeCcChhhC
Confidence 357889999955344 3466666777777766654 66544
No 237
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=65.66 E-value=35 Score=28.54 Aligned_cols=66 Identities=15% Similarity=0.293 Sum_probs=41.4
Q ss_pred CCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCc-EEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCC
Q psy16575 22 DPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDY-NVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASA 100 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~-~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~ 100 (247)
+.+.-+|++-||-..+... .+..+ +..+...|| +|++..-.++. .+..+|+.|++.++
T Consensus 135 ~k~e~~vlmgHGt~h~s~~-~YacL-d~~~~~~~f~~v~v~~ve~yP-----------------~~d~vi~~l~~~~~-- 193 (265)
T COG4822 135 NKDEILVLMGHGTDHHSNA-AYACL-DHVLDEYGFDNVFVAAVEGYP-----------------LVDTVIEYLRKNGI-- 193 (265)
T ss_pred CcCeEEEEEecCCCccHHH-HHHHH-HHHHHhcCCCceEEEEecCCC-----------------cHHHHHHHHHHcCC--
Confidence 4556689999996655532 34444 346677778 77776544332 24556777777776
Q ss_pred ccEEEEEe
Q psy16575 101 YDIHCVGH 108 (247)
Q Consensus 101 ~~i~liGh 108 (247)
+.++|+=.
T Consensus 194 ~~v~L~Pl 201 (265)
T COG4822 194 KEVHLIPL 201 (265)
T ss_pred ceEEEeee
Confidence 67887744
No 238
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=63.05 E-value=1e+02 Score=28.56 Aligned_cols=104 Identities=12% Similarity=0.218 Sum_probs=65.7
Q ss_pred CCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEE--c-CCCCC-----------CCCChHHH-hhc-HHHHHHH
Q psy16575 22 DPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFML--D-FADLA-----------PFPCYLSS-LSN-TRLVAQC 85 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~v--D-~~~~~-----------~~~~y~~~-~~~-~~~v~~~ 85 (247)
+...|++|++=|..+++.......++. ||++.++.|.++ | ||..+ ..+-|... ..+ ++.+.+.
T Consensus 96 ~~~~P~vImmvGLQGsGKTTt~~KLA~-~lkk~~~kvllVaaD~~RpAA~eQL~~La~q~~v~~f~~~~~~~Pv~Iak~a 174 (451)
T COG0541 96 AKKPPTVILMVGLQGSGKTTTAGKLAK-YLKKKGKKVLLVAADTYRPAAIEQLKQLAEQVGVPFFGSGTEKDPVEIAKAA 174 (451)
T ss_pred CCCCCeEEEEEeccCCChHhHHHHHHH-HHHHcCCceEEEecccCChHHHHHHHHHHHHcCCceecCCCCCCHHHHHHHH
Confidence 456789999999999998777788887 888788887766 3 44321 01112110 000 1111111
Q ss_pred H----------------------HHHHHHHHH--cCCCCccEEEEEechhhHHHhhhhhhccCcc
Q psy16575 86 A----------------------AQFYSHLTH--HGASAYDIHCVGHSLGAHICGMMSNHLTHRM 126 (247)
Q Consensus 86 l----------------------~~~i~~l~~--~~~~~~~i~liGhSlGg~va~~~a~~~~~~v 126 (247)
+ ..+++.+.+ .-+.|+.+.+|=-||=|+-|...|+.|.+++
T Consensus 175 l~~ak~~~~DvvIvDTAGRl~ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l 239 (451)
T COG0541 175 LEKAKEEGYDVVIVDTAGRLHIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEAL 239 (451)
T ss_pred HHHHHHcCCCEEEEeCCCcccccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhc
Confidence 1 233444332 2357789999999999999999999887654
No 239
>KOG2170|consensus
Probab=62.76 E-value=10 Score=33.43 Aligned_cols=27 Identities=26% Similarity=0.469 Sum_probs=20.8
Q ss_pred CCCCCeEEEEeCCCCCCCCChHHHHHH
Q psy16575 22 DPHKRNVIIIHGFNQSESQSPMTIIRD 48 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~~~~~~~l~~ 48 (247)
++.||.++=+|||++++.+..-+.+++
T Consensus 106 ~p~KPLvLSfHG~tGTGKN~Va~iiA~ 132 (344)
T KOG2170|consen 106 NPRKPLVLSFHGWTGTGKNYVAEIIAE 132 (344)
T ss_pred CCCCCeEEEecCCCCCchhHHHHHHHH
Confidence 578999999999999997633344554
No 240
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=62.64 E-value=78 Score=29.05 Aligned_cols=99 Identities=22% Similarity=0.275 Sum_probs=60.1
Q ss_pred EEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCC----------------hHH--H----hhcHHHHHHHH
Q psy16575 29 IIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPC----------------YLS--S----LSNTRLVAQCA 86 (247)
Q Consensus 29 v~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~----------------y~~--~----~~~~~~v~~~l 86 (247)
|+|=|-.++.. .....+++ .+.+.|.+|+.+|-+-.+.... ... . ..-...+++.+
T Consensus 4 I~iigT~DTK~-~E~~yl~~-~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 4 IAIIGTLDTKG-EELLYLRD-QIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred EEEEEccCCCH-HHHHHHHH-HHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 33445444443 24566666 5666789999999775432210 000 0 01123344555
Q ss_pred HHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhccCccccee
Q psy16575 87 AQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKII 130 (247)
Q Consensus 87 ~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~ 130 (247)
..++..|.+.+ ..+-|.-+|=|.|..++..+.+.+|--+.+++
T Consensus 82 ~~~v~~l~~~g-~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlm 124 (403)
T PF06792_consen 82 ARFVSDLYDEG-KIDGVIGIGGSGGTALATAAMRALPIGFPKLM 124 (403)
T ss_pred HHHHHHHHhcC-CccEEEEecCCccHHHHHHHHHhCCCCCCeEE
Confidence 55665554433 24678899999999999999999886566654
No 241
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=60.87 E-value=9.7 Score=32.74 Aligned_cols=29 Identities=24% Similarity=0.270 Sum_probs=21.9
Q ss_pred HHHHHcCCCCccEEEEEechhhHHHhhhhhh
Q psy16575 91 SHLTHHGASAYDIHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 91 ~~l~~~~~~~~~i~liGhSlGg~va~~~a~~ 121 (247)
+.+.+.|+ +.-.++|||+|-..|.+++..
T Consensus 74 ~~l~~~Gi--~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 74 RLWRSWGV--RPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHHHHcCC--cccEEEecCHHHHHHHHHhCC
Confidence 33566777 456899999999888877654
No 242
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=60.57 E-value=80 Score=28.21 Aligned_cols=98 Identities=16% Similarity=0.192 Sum_probs=61.3
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCcc
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYD 102 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~ 102 (247)
..+|.|+++=|-.+.+.......++. ++.+.|+.|+..- +.+ + + +..+.++-.|-++. .
T Consensus 136 ~~~p~Vil~vGVNG~GKTTTIaKLA~-~l~~~g~~VllaA----~DT--F-R--------AaAiEQL~~w~er~-----g 194 (340)
T COG0552 136 EKKPFVILFVGVNGVGKTTTIAKLAK-YLKQQGKSVLLAA----GDT--F-R--------AAAIEQLEVWGERL-----G 194 (340)
T ss_pred CCCcEEEEEEecCCCchHhHHHHHHH-HHHHCCCeEEEEe----cch--H-H--------HHHHHHHHHHHHHh-----C
Confidence 45799999999999998777888887 6667789998752 111 1 1 12333433333333 4
Q ss_pred EEEEEechhhHHH---hhhhhhccCcccceeeecCCCccccc
Q psy16575 103 IHCVGHSLGAHIC---GMMSNHLTHRMHKIIGIDPARPLVDR 141 (247)
Q Consensus 103 i~liGhSlGg~va---~~~a~~~~~~v~~i~~LdPa~p~f~~ 141 (247)
+.+|.|.-|+--| .-+.+....+=--++.+|.|+.+-..
T Consensus 195 v~vI~~~~G~DpAaVafDAi~~Akar~~DvvliDTAGRLhnk 236 (340)
T COG0552 195 VPVISGKEGADPAAVAFDAIQAAKARGIDVVLIDTAGRLHNK 236 (340)
T ss_pred CeEEccCCCCCcHHHHHHHHHHHHHcCCCEEEEeCcccccCc
Confidence 6778877777444 22323222233357789999987554
No 243
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=56.30 E-value=8.8 Score=33.61 Aligned_cols=29 Identities=24% Similarity=0.258 Sum_probs=21.9
Q ss_pred HHHHHcCCCCccEEEEEechhhHHHhhhhhh
Q psy16575 91 SHLTHHGASAYDIHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 91 ~~l~~~~~~~~~i~liGhSlGg~va~~~a~~ 121 (247)
+.|++.|+ ++-.++|||+|=..|.+++-.
T Consensus 76 ~~l~~~Gi--~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 76 RLLRSWGI--KPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHTTH--CESEEEESTTHHHHHHHHTTS
T ss_pred hhhccccc--ccceeeccchhhHHHHHHCCc
Confidence 33566775 677899999999888877654
No 244
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=56.04 E-value=78 Score=25.74 Aligned_cols=86 Identities=16% Similarity=0.206 Sum_probs=46.8
Q ss_pred HHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhc
Q psy16575 43 MTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 43 ~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~ 122 (247)
...+++ +++.+-...++++ +.... .+...-.++..-.+.-+.+-..+.+.-++ -...+-|-||||.-|...--+.
T Consensus 48 v~ala~-fie~G~vQlft~~--gldsE-Sf~a~h~~~adr~~rH~AyerYv~eEalp-gs~~~sgcsmGayhA~nfvfrh 122 (227)
T COG4947 48 VDALAS-FIEEGLVQLFTLS--GLDSE-SFLATHKNAADRAERHRAYERYVIEEALP-GSTIVSGCSMGAYHAANFVFRH 122 (227)
T ss_pred HHHHHH-HHhcCcEEEEEec--ccchH-hHhhhcCCHHHHHHHHHHHHHHHHHhhcC-CCccccccchhhhhhhhhheeC
Confidence 445554 7777656666665 22221 12222222222222222222332222233 4577889999999998888888
Q ss_pred cCcccceeeec
Q psy16575 123 THRMHKIIGID 133 (247)
Q Consensus 123 ~~~v~~i~~Ld 133 (247)
|+...++++|.
T Consensus 123 P~lftkvialS 133 (227)
T COG4947 123 PHLFTKVIALS 133 (227)
T ss_pred hhHhhhheeec
Confidence 88777777663
No 245
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=55.08 E-value=20 Score=33.19 Aligned_cols=65 Identities=20% Similarity=0.280 Sum_probs=36.0
Q ss_pred cEEEEEcCCCCCCCCChHH----HhhcHHHHHHHHHHHHHH-HHHc-CCCCccEEEEEechhhHHHhhhhhhc
Q psy16575 56 YNVFMLDFADLAPFPCYLS----SLSNTRLVAQCAAQFYSH-LTHH-GASAYDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 56 ~~Vi~vD~~~~~~~~~y~~----~~~~~~~v~~~l~~~i~~-l~~~-~~~~~~i~liGhSlGg~va~~~a~~~ 122 (247)
.|++-+|-+-..... |.. ...+...+ +++.+++.. +... .....+++|.|.|.||+-+-.++..+
T Consensus 116 anllfiDqPvGtGfS-y~~~~~~~~~d~~~a-~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i 186 (433)
T PLN03016 116 ANIIFLDQPVGSGFS-YSKTPIDKTGDISEV-KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEI 186 (433)
T ss_pred CcEEEecCCCCCCcc-CCCCCCCccCCHHHH-HHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHH
Confidence 789999977443221 211 11122222 444444443 3322 12336899999999999776665543
No 246
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=53.73 E-value=15 Score=31.64 Aligned_cols=27 Identities=15% Similarity=0.084 Sum_probs=20.8
Q ss_pred HHHcCCCCccEEEEEechhhHHHhhhhhh
Q psy16575 93 LTHHGASAYDIHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 93 l~~~~~~~~~i~liGhSlGg~va~~~a~~ 121 (247)
+.+.|+ ++-.++|||+|=..|..++-.
T Consensus 70 l~~~g~--~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 70 LLALLP--RPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHhcCC--CCcEEeecCHHHHHHHHHhCC
Confidence 456676 577899999999888776643
No 247
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=52.01 E-value=33 Score=30.20 Aligned_cols=65 Identities=20% Similarity=0.280 Sum_probs=36.1
Q ss_pred cEEEEEcCCCCCCCCChHH----HhhcHHHHHHHHHHHHHH-HHHc-CCCCccEEEEEechhhHHHhhhhhhc
Q psy16575 56 YNVFMLDFADLAPFPCYLS----SLSNTRLVAQCAAQFYSH-LTHH-GASAYDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 56 ~~Vi~vD~~~~~~~~~y~~----~~~~~~~v~~~l~~~i~~-l~~~-~~~~~~i~liGhSlGg~va~~~a~~~ 122 (247)
.|++-+|-+-..... |.. ...+...+ +++-.++.. +... .....+++|.|-|-|||-+-.++...
T Consensus 2 aNvLfiDqPvGvGfS-y~~~~~~~~~d~~~a-~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I 72 (319)
T PLN02213 2 ANIIFLDQPVGSGFS-YSKTPIDKTGDISEV-KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEI 72 (319)
T ss_pred ccEEEecCCCCCCCC-CCCCCCCccccHHHH-HHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHH
Confidence 478999988433221 221 11222333 444444433 3322 23447899999999999776555543
No 248
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=51.70 E-value=25 Score=33.02 Aligned_cols=97 Identities=11% Similarity=0.123 Sum_probs=53.7
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHH-------------------HHHhcCCcEEEEEcCCCCCCCC--ChHHHhhcHHHH
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRD-------------------AYIRRRDYNVFMLDFADLAPFP--CYLSSLSNTRLV 82 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~-------------------~~l~~~~~~Vi~vD~~~~~~~~--~y~~~~~~~~~v 82 (247)
++|.+|++.|-.+..+. +-.+.+ .++. .-+++-+|.+-..... .-.....+...+
T Consensus 100 ~rPvi~wlNGGPGcSS~--~g~l~elGP~rI~~~~~P~~~~NP~SW~~--~adLvFiDqPvGTGfS~a~~~e~~~d~~~~ 175 (498)
T COG2939 100 NRPVIFWLNGGPGCSSV--TGLLGELGPKRIQSGTSPSYPDNPGSWLD--FADLVFIDQPVGTGFSRALGDEKKKDFEGA 175 (498)
T ss_pred CCceEEEecCCCChHhh--hhhhhhcCCeeeeCCCCCCCCCCcccccc--CCceEEEecCcccCcccccccccccchhcc
Confidence 57999999998887632 222110 0111 1467778855322110 011233344555
Q ss_pred HHHHHHHHHH----HHHcCCCCccEEEEEechhhHHHhhhhhhccC
Q psy16575 83 AQCAAQFYSH----LTHHGASAYDIHCVGHSLGAHICGMMSNHLTH 124 (247)
Q Consensus 83 ~~~l~~~i~~----l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~ 124 (247)
++++..+.+. +.+..-...+.+|+|-|.|||=+..+|..+.+
T Consensus 176 ~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~ 221 (498)
T COG2939 176 GKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLE 221 (498)
T ss_pred chhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHH
Confidence 5555554443 33333223689999999999887776665543
No 249
>KOG2521|consensus
Probab=51.50 E-value=85 Score=28.24 Aligned_cols=89 Identities=9% Similarity=0.051 Sum_probs=49.0
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccE
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDI 103 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i 103 (247)
...+||++=||.+..+. +...... ..++.|+.++.+--+-......-...........+.+ ...+.....++.++
T Consensus 37 s~k~Iv~~~gWag~~~r-~l~ky~~-~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l---~~L~~~~~~~~~pi 111 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDR-NLMKYSK-IYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRL---SELLSDYNSDPCPI 111 (350)
T ss_pred ccccEEEEeeeccccch-hHHHHHH-HHhcCCceEEEecCcccccccccccccchhhHHHHHH---HHHhhhccCCcCce
Confidence 34578888899999876 5556555 4455678888765443222110000000011111222 22233444566788
Q ss_pred EEEEechhhHHHhh
Q psy16575 104 HCVGHSLGAHICGM 117 (247)
Q Consensus 104 ~liGhSlGg~va~~ 117 (247)
.+-=+|+||-...+
T Consensus 112 ~fh~FS~ng~~~~~ 125 (350)
T KOG2521|consen 112 IFHVFSGNGVRLMY 125 (350)
T ss_pred EEEEecCCceeehH
Confidence 88899999976643
No 250
>COG4425 Predicted membrane protein [Function unknown]
Probab=51.47 E-value=50 Score=30.79 Aligned_cols=66 Identities=20% Similarity=0.198 Sum_probs=35.8
Q ss_pred HHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHH-HHHHHHHcC-CCCccEEEEEechhhHHH
Q psy16575 50 YIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQ-FYSHLTHHG-ASAYDIHCVGHSLGAHIC 115 (247)
Q Consensus 50 ~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~-~i~~l~~~~-~~~~~i~liGhSlGg~va 115 (247)
||..++...+++.|+....-........+..+.++.+-+ +...+.++- -.-.|++|-|-|||+.=.
T Consensus 344 yL~~Gd~asVsmQYSyL~SwLSllvdpdyg~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~~s 411 (588)
T COG4425 344 YLYNGDVASVSMQYSYLPSWLSLLVDPDYGADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAMGS 411 (588)
T ss_pred HHhCCceEEEEEehhhHHHHHHHhcCCCcchhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccccC
Confidence 888888999999988654211011111112222333322 223333321 123589999999998644
No 251
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=51.30 E-value=21 Score=29.90 Aligned_cols=34 Identities=18% Similarity=0.125 Sum_probs=25.0
Q ss_pred HHHHHHHHHcCCCCccEEEEEechhhHHHhhhhh
Q psy16575 87 AQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSN 120 (247)
Q Consensus 87 ~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~ 120 (247)
.-+++.|.+.++.++.-.++|-|.||.+|..++.
T Consensus 15 ~GVl~~L~e~gi~~~~~~i~G~SAGAl~aa~~as 48 (233)
T cd07224 15 LGVLSLLIEAGVINETTPLAGASAGSLAAACSAS 48 (233)
T ss_pred HHHHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHc
Confidence 3456666677775445689999999999976654
No 252
>KOG1551|consensus
Probab=51.21 E-value=19 Score=31.19 Aligned_cols=35 Identities=14% Similarity=0.251 Sum_probs=26.9
Q ss_pred CccEEEEEechhhHHHhhhhhhccCcccceeeecC
Q psy16575 100 AYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDP 134 (247)
Q Consensus 100 ~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdP 134 (247)
..++.|+|-||||-+|..++...+..|..+-.|.+
T Consensus 194 ~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~ 228 (371)
T KOG1551|consen 194 LGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNS 228 (371)
T ss_pred cccceeeeeecccHHHHhhcccCCCCccccccccc
Confidence 36899999999999999999877665554444443
No 253
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=48.18 E-value=38 Score=28.16 Aligned_cols=33 Identities=24% Similarity=0.357 Sum_probs=24.0
Q ss_pred HHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhh
Q psy16575 87 AQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 87 ~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~ 121 (247)
.-+++.|.+.++++ -.++|-|.||.+|..++..
T Consensus 16 ~GvL~aL~e~gi~~--~~i~GtSaGAi~aa~~a~g 48 (221)
T cd07210 16 LGFLAALLEMGLEP--SAISGTSAGALVGGLFASG 48 (221)
T ss_pred HHHHHHHHHcCCCc--eEEEEeCHHHHHHHHHHcC
Confidence 34556666667644 4699999999999877753
No 254
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=47.85 E-value=15 Score=33.78 Aligned_cols=36 Identities=14% Similarity=0.166 Sum_probs=25.7
Q ss_pred HHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhccC
Q psy16575 87 AQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLTH 124 (247)
Q Consensus 87 ~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~ 124 (247)
.-+++.|.+.++.+ =.++|-|.||.+|+.++...++
T Consensus 89 iGVLkaL~E~gl~p--~vIsGTSaGAivAal~as~~~e 124 (421)
T cd07230 89 IGVLKALFEANLLP--RIISGSSAGSIVAAILCTHTDE 124 (421)
T ss_pred HHHHHHHHHcCCCC--CEEEEECHHHHHHHHHHcCCHH
Confidence 34556666777754 3799999999999877765443
No 255
>PRK02399 hypothetical protein; Provisional
Probab=47.53 E-value=2.1e+02 Score=26.29 Aligned_cols=99 Identities=20% Similarity=0.280 Sum_probs=58.5
Q ss_pred EEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCC---C-------------ChHHHhh------cHHHHHHHH
Q psy16575 29 IIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPF---P-------------CYLSSLS------NTRLVAQCA 86 (247)
Q Consensus 29 v~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~---~-------------~y~~~~~------~~~~v~~~l 86 (247)
|+|=|-.++... ....+++ .+.+.|..|+.+|-+..+.. + ....... -+...++.+
T Consensus 6 I~iigT~DTK~~-E~~yl~~-~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga 83 (406)
T PRK02399 6 IYIAGTLDTKGE-ELAYVKD-LIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGA 83 (406)
T ss_pred EEEEeccCCcHH-HHHHHHH-HHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHH
Confidence 555565555432 4556665 55566799999998543211 0 0000000 012334444
Q ss_pred HHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhccCccccee
Q psy16575 87 AQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKII 130 (247)
Q Consensus 87 ~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~ 130 (247)
..++..|.+.+ ..+-|.-+|=|.|..++..+.+.+|--+.+++
T Consensus 84 ~~~v~~L~~~g-~i~gviglGGs~GT~lat~aMr~LPiG~PKlm 126 (406)
T PRK02399 84 AAFVRELYERG-DVAGVIGLGGSGGTALATPAMRALPIGVPKLM 126 (406)
T ss_pred HHHHHHHHhcC-CccEEEEecCcchHHHHHHHHHhCCCCCCeEE
Confidence 45554444433 34789999999999999999999886566654
No 256
>COG3675 Predicted lipase [Lipid metabolism]
Probab=47.38 E-value=22 Score=31.04 Aligned_cols=25 Identities=28% Similarity=0.437 Sum_probs=20.3
Q ss_pred ccEEEEEechhhHHHhhhhhhccCc
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHLTHR 125 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~~~~ 125 (247)
-.+.++|||.|+.+++..|.++..+
T Consensus 175 Yrig~tghS~g~aii~vrGtyfe~k 199 (332)
T COG3675 175 YRIGITGHSSGGAIICVRGTYFERK 199 (332)
T ss_pred eEEEEEeecCCccEEEEeccchhcc
Confidence 4689999999999998888865433
No 257
>PLN02209 serine carboxypeptidase
Probab=47.16 E-value=30 Score=32.09 Aligned_cols=64 Identities=22% Similarity=0.251 Sum_probs=35.1
Q ss_pred cEEEEEcCCCCCCCCChHH----HhhcHHHHHHHHHHHHHH-HHHc-CCCCccEEEEEechhhHHHhhhhhh
Q psy16575 56 YNVFMLDFADLAPFPCYLS----SLSNTRLVAQCAAQFYSH-LTHH-GASAYDIHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 56 ~~Vi~vD~~~~~~~~~y~~----~~~~~~~v~~~l~~~i~~-l~~~-~~~~~~i~liGhSlGg~va~~~a~~ 121 (247)
.|++-+|-+-..... |.. ...+.+. ++++-+++.. +... .....+++|.|.|.|||-+-.++..
T Consensus 118 anllfiDqPvGtGfS-y~~~~~~~~~~~~~-a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~ 187 (437)
T PLN02209 118 ANIIFLDQPVGSGFS-YSKTPIERTSDTSE-VKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHE 187 (437)
T ss_pred CcEEEecCCCCCCcc-CCCCCCCccCCHHH-HHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHH
Confidence 688999976433221 211 1122222 3455555443 3332 2233589999999999866555543
No 258
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=47.14 E-value=42 Score=26.37 Aligned_cols=33 Identities=18% Similarity=0.146 Sum_probs=24.1
Q ss_pred HHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhh
Q psy16575 87 AQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 87 ~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~ 121 (247)
.-+++.|.+.++. -=.++|-|.||.+|..++..
T Consensus 16 ~Gvl~~L~~~~~~--~d~i~GtSaGal~a~~~a~g 48 (175)
T cd07205 16 IGVLKALEEAGIP--IDIVSGTSAGAIVGALYAAG 48 (175)
T ss_pred HHHHHHHHHcCCC--eeEEEEECHHHHHHHHHHcC
Confidence 4455666666653 34799999999999887754
No 259
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=46.01 E-value=23 Score=30.26 Aligned_cols=28 Identities=29% Similarity=0.336 Sum_probs=20.6
Q ss_pred HHHcC-CCCccEEEEEechhhHHHhhhhhhc
Q psy16575 93 LTHHG-ASAYDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 93 l~~~~-~~~~~i~liGhSlGg~va~~~a~~~ 122 (247)
+.+.+ + +.-.++|||+|=..|..++..+
T Consensus 76 l~~~g~i--~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 76 LKEQGGL--KPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred HHHcCCC--CCCEEeecCHHHHHHHHHhCCC
Confidence 44555 6 5668999999998887776543
No 260
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=45.27 E-value=96 Score=26.12 Aligned_cols=40 Identities=10% Similarity=0.071 Sum_probs=24.4
Q ss_pred CCCeEEEEeCCCCCCC-CChHHHHHHHHHhcCCcEEEEEcCC
Q psy16575 24 HKRNVIIIHGFNQSES-QSPMTIIRDAYIRRRDYNVFMLDFA 64 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~-~~~~~~l~~~~l~~~~~~Vi~vD~~ 64 (247)
..|.|+||.=-....+ ..+...+.+ .+++.|+.|..++-.
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~-af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAE-ALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHH-HHHHCCCEEEEeccc
Confidence 4678999886443222 124444554 556678998888754
No 261
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=45.09 E-value=49 Score=30.50 Aligned_cols=103 Identities=14% Similarity=0.061 Sum_probs=70.9
Q ss_pred CCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCC--ChHHHhhcHHHHHHHHHHHHHHHHHcCCC
Q psy16575 22 DPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFP--CYLSSLSNTRLVAQCAAQFYSHLTHHGAS 99 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~--~y~~~~~~~~~v~~~l~~~i~~l~~~~~~ 99 (247)
+.++|+|+..-|+.-+.+. ....+.. +| +-|-+.+.+|-++.|. .-.....++++.+.+.-.+++.++.. -
T Consensus 60 ~~drPtV~~T~GY~~~~~p-~r~Ept~-Ll---d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~i--Y 132 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVSTSP-RRSEPTQ-LL---DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPI--Y 132 (448)
T ss_pred CCCCCeEEEecCcccccCc-cccchhH-hh---ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhh--c
Confidence 4568999999998776532 2233333 33 4688889988776541 11234456777777777777766543 2
Q ss_pred CccEEEEEechhhHHHhhhhhhccCcccceee
Q psy16575 100 AYDIHCVGHSLGAHICGMMSNHLTHRMHKIIG 131 (247)
Q Consensus 100 ~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~ 131 (247)
..+-.--|-|=||+.+.+.-+.+|.-|...|.
T Consensus 133 ~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVa 164 (448)
T PF05576_consen 133 PGKWISTGGSKGGMTAVYYRRFYPDDVDGTVA 164 (448)
T ss_pred cCCceecCcCCCceeEEEEeeeCCCCCCeeee
Confidence 36788899999999999999999987766554
No 262
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=44.53 E-value=22 Score=29.60 Aligned_cols=92 Identities=15% Similarity=0.159 Sum_probs=48.4
Q ss_pred CCeEEEEeCCCCCCCC-ChHHHHHHHHHhcCCcEEEEEcCCCCCCCC----------ChHHHhhcHHHHHHHHHH--HHH
Q psy16575 25 KRNVIIIHGFNQSESQ-SPMTIIRDAYIRRRDYNVFMLDFADLAPFP----------CYLSSLSNTRLVAQCAAQ--FYS 91 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~-~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~----------~y~~~~~~~~~v~~~l~~--~i~ 91 (247)
+++|.||.=-...... .+....++ .|++.|+.|.-++........ -|. .-.|+..+-+.+.+ +.+
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~-~l~~lg~~v~~L~l~~~~~~~Ie~~l~~~d~IyV-gGGNTF~LL~~lke~gld~ 109 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRN-ALAKLGLEVSELHLSKPPLAAIENKLMKADIIYV-GGGNTFNLLQELKETGLDD 109 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHH-HHHHcCCeeeeeeccCCCHHHHHHhhhhccEEEE-CCchHHHHHHHHHHhCcHH
Confidence 6799999965554432 23455555 667778999998876432110 010 11233332222221 111
Q ss_pred HHHHcCCCCccEEEEEechhhHHHhhhhh
Q psy16575 92 HLTHHGASAYDIHCVGHSLGAHICGMMSN 120 (247)
Q Consensus 92 ~l~~~~~~~~~i~liGhSlGg~va~~~a~ 120 (247)
.+++ .+. +-+-.||.|.||.+++--..
T Consensus 110 iIr~-~vk-~G~~YiG~SAGA~ia~p~I~ 136 (224)
T COG3340 110 IIRE-RVK-AGTPYIGWSAGANIAGPTIE 136 (224)
T ss_pred HHHH-HHH-cCCceEEeccCceeecCcee
Confidence 1111 111 34678999999999865443
No 263
>PTZ00445 p36-lilke protein; Provisional
Probab=44.00 E-value=63 Score=27.00 Aligned_cols=67 Identities=15% Similarity=0.059 Sum_probs=42.1
Q ss_pred HHHHHHHHHhcCCcEEEEEcCCCCC---CCCChHHH----hhcHHHHHHHHHHHHHHHHHcCCCCccEEEEEechhhH
Q psy16575 43 MTIIRDAYIRRRDYNVFMLDFADLA---PFPCYLSS----LSNTRLVAQCAAQFYSHLTHHGASAYDIHCVGHSLGAH 113 (247)
Q Consensus 43 ~~~l~~~~l~~~~~~Vi~vD~~~~~---~~~~y~~~----~~~~~~v~~~l~~~i~~l~~~~~~~~~i~liGhSlGg~ 113 (247)
...+++ +|++.|.++++.|+-..- .+..|... ..-...+...+..++..|.+.++ +|.+|-||-=.+
T Consensus 31 ~~~~v~-~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I---~v~VVTfSd~~~ 104 (219)
T PTZ00445 31 ADKFVD-LLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNI---KISVVTFSDKEL 104 (219)
T ss_pred HHHHHH-HHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCC---eEEEEEccchhh
Confidence 344554 788889999999987531 11112211 11122344566777777877777 799999997655
No 264
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=43.79 E-value=48 Score=26.39 Aligned_cols=33 Identities=18% Similarity=0.187 Sum_probs=24.5
Q ss_pred HHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhh
Q psy16575 87 AQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 87 ~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~ 121 (247)
..+++.|.+.++. .=.++|-|.||.+|..++..
T Consensus 15 ~Gvl~~L~e~~~~--~d~i~GtSaGai~aa~~a~g 47 (194)
T cd07207 15 IGALKALEEAGIL--KKRVAGTSAGAITAALLALG 47 (194)
T ss_pred HHHHHHHHHcCCC--cceEEEECHHHHHHHHHHcC
Confidence 4556666666664 36889999999999777754
No 265
>PRK00889 adenylylsulfate kinase; Provisional
Probab=43.62 E-value=37 Score=26.60 Aligned_cols=38 Identities=16% Similarity=0.259 Sum_probs=28.3
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcC
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDF 63 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~ 63 (247)
++.+|++.|+.+++.+.....++. .+...+..+..+|-
T Consensus 3 ~g~~i~~~G~~GsGKST~a~~la~-~l~~~g~~v~~id~ 40 (175)
T PRK00889 3 RGVTVWFTGLSGAGKTTIARALAE-KLREAGYPVEVLDG 40 (175)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHH-HHHHcCCeEEEEcC
Confidence 456899999999998766666765 55555678887764
No 266
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=43.59 E-value=49 Score=25.99 Aligned_cols=34 Identities=18% Similarity=0.192 Sum_probs=25.4
Q ss_pred HHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhc
Q psy16575 87 AQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 87 ~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~ 122 (247)
.-+++.|.+.++ ..-.++|-|+||.+|..++...
T Consensus 14 ~Gvl~aL~e~gi--~~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 14 VGVAKALRERGP--LIDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred HHHHHHHHHcCC--CCCEEEEECHHHHHHHHHHcCC
Confidence 345566666666 3667999999999998887654
No 267
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=43.21 E-value=13 Score=31.51 Aligned_cols=19 Identities=32% Similarity=0.291 Sum_probs=14.2
Q ss_pred CCccEEEEEechhhHHHhh
Q psy16575 99 SAYDIHCVGHSLGAHICGM 117 (247)
Q Consensus 99 ~~~~i~liGhSlGg~va~~ 117 (247)
+.+.|.++|||||-.=..+
T Consensus 233 ~i~~I~i~GhSl~~~D~~Y 251 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVDYPY 251 (270)
T ss_pred CCCEEEEEeCCCchhhHHH
Confidence 4489999999999743333
No 268
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=42.83 E-value=27 Score=30.98 Aligned_cols=29 Identities=21% Similarity=0.229 Sum_probs=19.7
Q ss_pred HHHcCCCCc----cEEEEEechhhHHHhhhhhh
Q psy16575 93 LTHHGASAY----DIHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 93 l~~~~~~~~----~i~liGhSlGg~va~~~a~~ 121 (247)
+...++.++ .-.++|||+|=..|..++..
T Consensus 112 l~~~g~~~~~~~~~~~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 112 LRARDGGQAVIDSVDVCAGLSLGEYTALVFAGA 144 (343)
T ss_pred HHhcCCCcccccCCCeeeeccHHHHHHHHHhCC
Confidence 455554332 23689999999888777754
No 269
>PRK10279 hypothetical protein; Provisional
Probab=42.59 E-value=32 Score=30.18 Aligned_cols=31 Identities=16% Similarity=0.148 Sum_probs=23.6
Q ss_pred HHHHHHHHcCCCCccEEEEEechhhHHHhhhhh
Q psy16575 88 QFYSHLTHHGASAYDIHCVGHSLGAHICGMMSN 120 (247)
Q Consensus 88 ~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~ 120 (247)
-+++.|.+.+++ --.++|-|+||.+++.++.
T Consensus 22 GVL~aL~E~gi~--~d~i~GtS~GAlvga~yA~ 52 (300)
T PRK10279 22 GVINALKKVGIE--IDIVAGCSIGSLVGAAYAC 52 (300)
T ss_pred HHHHHHHHcCCC--cCEEEEEcHHHHHHHHHHc
Confidence 356667777774 4678999999999977664
No 270
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=42.50 E-value=1e+02 Score=29.74 Aligned_cols=34 Identities=21% Similarity=0.349 Sum_probs=22.7
Q ss_pred CccEEEEEe------chhhHHHhhh-hhhccCcccceeeecCC
Q psy16575 100 AYDIHCVGH------SLGAHICGMM-SNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 100 ~~~i~liGh------SlGg~va~~~-a~~~~~~v~~i~~LdPa 135 (247)
.++|.++|| ++|+.++... |....+ ..-+-+||-
T Consensus 337 ~d~VfImGHk~pDmDalGsAig~~~~A~~~~~--~a~~v~dp~ 377 (655)
T COG3887 337 SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK--EAFAVLDPE 377 (655)
T ss_pred cCcEEEEccCCCChHHHHHHHHHHHHHHhccc--ccEEEECcc
Confidence 389999999 8999998543 433322 344557754
No 271
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=41.85 E-value=88 Score=22.63 Aligned_cols=32 Identities=16% Similarity=0.192 Sum_probs=23.7
Q ss_pred CCccEEEEEechhh--HHHhhhhhhccCccccee
Q psy16575 99 SAYDIHCVGHSLGA--HICGMMSNHLTHRMHKII 130 (247)
Q Consensus 99 ~~~~i~liGhSlGg--~va~~~a~~~~~~v~~i~ 130 (247)
+..++.|||-|=-. .+-..+++.+|++|..|.
T Consensus 63 P~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai~ 96 (100)
T PF09949_consen 63 PERKFILIGDSGQHDPEIYAEIARRFPGRILAIY 96 (100)
T ss_pred CCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEEE
Confidence 55799999999655 344667788898887653
No 272
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=41.25 E-value=36 Score=29.34 Aligned_cols=38 Identities=3% Similarity=0.198 Sum_probs=31.5
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEc
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLD 62 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD 62 (247)
..|++|++.||-+++.......|.. .+...+++|.++.
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~-~lDPRg~~V~s~~ 91 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMS-GVNPQGCQVTSFK 91 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHH-hcCCCeeEEEeCC
Confidence 4599999999999987777777775 7777789999985
No 273
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=40.73 E-value=2.7e+02 Score=25.02 Aligned_cols=22 Identities=23% Similarity=0.338 Sum_probs=17.8
Q ss_pred CCccEEEEEechhhHHHhhhhh
Q psy16575 99 SAYDIHCVGHSLGAHICGMMSN 120 (247)
Q Consensus 99 ~~~~i~liGhSlGg~va~~~a~ 120 (247)
+-++|++.|+|=||.+|.-++-
T Consensus 120 pGD~Iy~FGFSRGAf~aRVlag 141 (423)
T COG3673 120 PGDEIYAFGFSRGAFSARVLAG 141 (423)
T ss_pred CCCeEEEeeccchhHHHHHHHH
Confidence 4589999999999998855543
No 274
>KOG1532|consensus
Probab=40.11 E-value=57 Score=28.62 Aligned_cols=43 Identities=9% Similarity=0.253 Sum_probs=31.7
Q ss_pred CCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCC
Q psy16575 22 DPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFAD 65 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~ 65 (247)
...+|.+|++-|..+++...+.+.|.. ++......-+++++..
T Consensus 15 ~~~~p~~ilVvGMAGSGKTTF~QrL~~-hl~~~~~ppYviNLDP 57 (366)
T KOG1532|consen 15 AIQRPVIILVVGMAGSGKTTFMQRLNS-HLHAKKTPPYVINLDP 57 (366)
T ss_pred cccCCcEEEEEecCCCCchhHHHHHHH-HHhhccCCCeEEeCCH
Confidence 456799999999999998888888886 5555445555555544
No 275
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=38.96 E-value=39 Score=29.69 Aligned_cols=33 Identities=21% Similarity=0.234 Sum_probs=24.3
Q ss_pred HHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhh
Q psy16575 87 AQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 87 ~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~ 121 (247)
.-+++.|.+.++. -=.++|-|+||.+++.++..
T Consensus 31 iGvL~aLee~gi~--~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 31 IGVIKALEEAGIP--VDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHHHHHcCCC--CCEEEEECHHHHHHHHHHcC
Confidence 3456667777774 45688999999999776654
No 276
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=38.72 E-value=41 Score=29.01 Aligned_cols=32 Identities=19% Similarity=0.286 Sum_probs=24.0
Q ss_pred HHHHHHHHcCCCCccEEEEEechhhHHHhhhhhh
Q psy16575 88 QFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 88 ~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~ 121 (247)
-+++.|.+.+++ -=.++|-|+||.+++.++..
T Consensus 27 GVL~aLeE~gi~--~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 27 GILQALEEAGIP--IDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHHcCCC--ccEEEEECHHHHHHHHHHcC
Confidence 356667777774 45689999999999777654
No 277
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=38.09 E-value=1.3e+02 Score=27.17 Aligned_cols=34 Identities=12% Similarity=0.124 Sum_probs=24.6
Q ss_pred CCccEEEEEec-hhhHHHhhhhhhccCcccceeeecCC
Q psy16575 99 SAYDIHCVGHS-LGAHICGMMSNHLTHRMHKIIGIDPA 135 (247)
Q Consensus 99 ~~~~i~liGhS-lGg~va~~~a~~~~~~v~~i~~LdPa 135 (247)
...+|.++|-. +|..++..+++. -+++|+.+|+.
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~---Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAA---GVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHc---CCCeEEEEeCC
Confidence 34689999885 677777666554 26788888876
No 278
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=38.08 E-value=43 Score=28.20 Aligned_cols=40 Identities=20% Similarity=0.305 Sum_probs=32.4
Q ss_pred CCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEc
Q psy16575 22 DPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLD 62 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD 62 (247)
..+.|++|++.||-+++.......+.. .+...+++|.++.
T Consensus 27 ~~~~~vlIv~eG~DaAGKg~~I~~l~~-~lDPRg~~v~~~~ 66 (230)
T TIGR03707 27 ETGARVVIVFEGRDAAGKGGTIKRITE-HLNPRGARVVALP 66 (230)
T ss_pred HcCCCEEEEEeCCCCCCchHHHHHHHH-hcCCCeeEEEeCC
Confidence 345799999999999987767777775 6777789999986
No 279
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=37.98 E-value=64 Score=24.91 Aligned_cols=14 Identities=36% Similarity=0.313 Sum_probs=11.7
Q ss_pred cEEEEEechhhHHH
Q psy16575 102 DIHCVGHSLGAHIC 115 (247)
Q Consensus 102 ~i~liGhSlGg~va 115 (247)
-..++|.|.||.++
T Consensus 69 G~vi~G~SAGA~i~ 82 (154)
T PF03575_consen 69 GGVIIGTSAGAMIL 82 (154)
T ss_dssp TSEEEEETHHHHCT
T ss_pred CCEEEEEChHHhhc
Confidence 37899999999873
No 280
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=37.04 E-value=42 Score=29.28 Aligned_cols=31 Identities=19% Similarity=0.165 Sum_probs=24.3
Q ss_pred HHHHHHHcCCCCccEEEEEechhhHHHhhhhhh
Q psy16575 89 FYSHLTHHGASAYDIHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 89 ~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~ 121 (247)
+++.|.+.++ +.-.+.|-|+||.++..++..
T Consensus 29 Vl~aL~e~gi--~~~~iaGtS~GAiva~l~A~g 59 (306)
T COG1752 29 VLKALEEAGI--PIDVIAGTSAGAIVAALYAAG 59 (306)
T ss_pred HHHHHHHcCC--CccEEEecCHHHHHHHHHHcC
Confidence 4566777776 567899999999999777764
No 281
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=36.84 E-value=1.3e+02 Score=27.84 Aligned_cols=63 Identities=16% Similarity=0.108 Sum_probs=39.1
Q ss_pred HHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEEEEech
Q psy16575 44 TIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHCVGHSL 110 (247)
Q Consensus 44 ~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~liGhSl 110 (247)
..+.. .++.....++++|--..-.++.-.++...+.++.+..+++++..++.++ .+.++||=-
T Consensus 158 e~I~~-~l~~~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i---~~fiVGHVT 220 (456)
T COG1066 158 EDIIA-ELEQEKPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNI---AIFIVGHVT 220 (456)
T ss_pred HHHHH-HHHhcCCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCC---eEEEEEEEc
Confidence 34443 4455568899999433222222223445667777777888877777765 689999843
No 282
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=36.69 E-value=1.3e+02 Score=24.09 Aligned_cols=44 Identities=25% Similarity=0.272 Sum_probs=25.5
Q ss_pred CCCeEEEEeCCCCCCCCC-hHHHHHHHHHhcCCcEEEEEcCCCCCC
Q psy16575 24 HKRNVIIIHGFNQSESQS-PMTIIRDAYIRRRDYNVFMLDFADLAP 68 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~-~~~~l~~~~l~~~~~~Vi~vD~~~~~~ 68 (247)
.+++++++||-.+..-.. ....+.+ -|++.|..+-.+-+++.+.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~-~L~~~g~~~~~~~~p~~gH 187 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYN-ALRKAGKPVELLIFPGEGH 187 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHH-HHHHTTSSEEEEEETT-SS
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHH-HHHhcCCCEEEEEcCcCCC
Confidence 468999999976654321 2334554 3445566666666655443
No 283
>PF07394 DUF1501: Protein of unknown function (DUF1501); InterPro: IPR010869 This family contains a number of hypothetical bacterial proteins of unknown function approximately 400 residues long.
Probab=35.85 E-value=2.3e+02 Score=25.45 Aligned_cols=56 Identities=14% Similarity=0.070 Sum_probs=39.3
Q ss_pred HHhcCCcEEEEEcCCCCCCC-CChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEEE
Q psy16575 50 YIRRRDYNVFMLDFADLAPF-PCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHCV 106 (247)
Q Consensus 50 ~l~~~~~~Vi~vD~~~~~~~-~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~li 106 (247)
.+...+..|+.+++.++..- ............+.+.++.|++.|.+.++ .+++.++
T Consensus 240 ~~~~~g~~v~~V~~gGwDTH~~~~~~~~~ll~~L~~alaaf~~dL~~~g~-~d~t~vv 296 (392)
T PF07394_consen 240 RLIEAGVRVVFVSLGGWDTHSNQGNRHARLLPELDQALAAFIQDLKERGL-LDDTLVV 296 (392)
T ss_pred HHhhcCCEEEEECCCCccCccccHhHHHHHHHHHHHHHHHHHHHHHhcCC-cCceEEE
Confidence 33456799999998875422 12344555668888899999999988876 3666665
No 284
>PRK14457 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=35.03 E-value=1.6e+02 Score=26.41 Aligned_cols=80 Identities=14% Similarity=0.203 Sum_probs=51.5
Q ss_pred EEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEEEE
Q psy16575 28 VIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHCVG 107 (247)
Q Consensus 28 vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~liG 107 (247)
+++|.|++++. +....+++ +++.-+..|=++.|...+.. .|... . .+.+.++.+.+.+.|+. ..|.
T Consensus 260 y~LIpGvNDs~--e~a~~La~-~l~~l~~~VnLIPynp~~~~-~~~~p--s----~e~i~~f~~~L~~~Gi~----vtvR 325 (345)
T PRK14457 260 YILLGGVNDLP--EHAEELAN-LLRGFQSHVNLIPYNPIDEV-EFQRP--S----PKRIQAFQRVLEQRGVA----VSVR 325 (345)
T ss_pred EEEECCcCCCH--HHHHHHHH-HHhcCCCeEEEecCCCCCCC-CCCCC--C----HHHHHHHHHHHHHCCCe----EEEe
Confidence 68899999887 34667775 77654456666667665543 23211 1 13456666667777762 4589
Q ss_pred echhhHHHhhhhhh
Q psy16575 108 HSLGAHICGMMSNH 121 (247)
Q Consensus 108 hSlGg~va~~~a~~ 121 (247)
.|.|.-|.+..|+.
T Consensus 326 ~~~G~di~aaCGqL 339 (345)
T PRK14457 326 ASRGLDANAACGQL 339 (345)
T ss_pred CCCCCchhhccccc
Confidence 99999887666554
No 285
>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning]
Probab=34.91 E-value=53 Score=27.97 Aligned_cols=38 Identities=18% Similarity=0.304 Sum_probs=27.6
Q ss_pred EEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCC
Q psy16575 28 VIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFAD 65 (247)
Q Consensus 28 vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~ 65 (247)
+|.|-|=++++.+.....++.+++.+++|+|+++|-..
T Consensus 2 kIaI~GKGG~GKTtiaalll~~l~~~~~~~VLvVDaDp 39 (255)
T COG3640 2 KIAITGKGGVGKTTIAALLLKRLLSKGGYNVLVVDADP 39 (255)
T ss_pred eEEEecCCCccHHHHHHHHHHHHHhcCCceEEEEeCCC
Confidence 57788877777653444436668888889999999654
No 286
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=33.12 E-value=57 Score=27.51 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=22.1
Q ss_pred HHHHHHHcCCCCcc--EEEEEechhhHHHhhhhhh
Q psy16575 89 FYSHLTHHGASAYD--IHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 89 ~i~~l~~~~~~~~~--i~liGhSlGg~va~~~a~~ 121 (247)
+++.|.+.++.+.+ -.++|-|.||.+|..++..
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a~g 51 (243)
T cd07204 17 VASALREHAPRLLQNARRIAGASAGAIVAAVVLCG 51 (243)
T ss_pred HHHHHHHcCcccccCCCEEEEEcHHHHHHHHHHhC
Confidence 44555566653222 3899999999999766543
No 287
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=33.01 E-value=1.7e+02 Score=20.30 Aligned_cols=24 Identities=8% Similarity=0.079 Sum_probs=13.9
Q ss_pred eEEEEeCCCCC-CCCChHHHHHHHH
Q psy16575 27 NVIIIHGFNQS-ESQSPMTIIRDAY 50 (247)
Q Consensus 27 ~vv~iHG~~~~-~~~~~~~~l~~~~ 50 (247)
.+++-||-... ....+...+++.+
T Consensus 2 lllv~HGs~~~s~~~~~~~~~~~~l 26 (101)
T cd03409 2 LLVVGHGSPYKDPYKKDIEAQAHNL 26 (101)
T ss_pred EEEEECCCCCCccHHHHHHHHHHHH
Confidence 57788997654 3223455555533
No 288
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=32.83 E-value=29 Score=31.86 Aligned_cols=38 Identities=11% Similarity=0.086 Sum_probs=26.3
Q ss_pred HHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhccCcc
Q psy16575 87 AQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLTHRM 126 (247)
Q Consensus 87 ~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v 126 (247)
.-+++.|.+.++. .=.++|-|.||.+|+.++...++++
T Consensus 83 ~GVlkaL~e~gll--p~iI~GtSAGAivaalla~~t~~el 120 (407)
T cd07232 83 FGVVKALLDADLL--PNVISGTSGGSLVAALLCTRTDEEL 120 (407)
T ss_pred HHHHHHHHhCCCC--CCEEEEECHHHHHHHHHHcCCHHHH
Confidence 3455666666664 3359999999999988886544333
No 289
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=32.80 E-value=94 Score=26.76 Aligned_cols=38 Identities=16% Similarity=0.339 Sum_probs=24.4
Q ss_pred eEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCC
Q psy16575 27 NVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFAD 65 (247)
Q Consensus 27 ~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~ 65 (247)
++|++=|+.+++.+.....|++ ++...+..|+.++-..
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~-~~~~~~~~v~~i~~~~ 39 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKK-YLEEKGKEVVIISDDS 39 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHH-HHHHTT--EEEE-THH
T ss_pred EEEEEEcCCCCcHHHHHHHHHH-HHHhcCCEEEEEcccc
Confidence 4788999999997766677776 6776789999988443
No 290
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=32.64 E-value=34 Score=30.39 Aligned_cols=32 Identities=19% Similarity=0.383 Sum_probs=23.4
Q ss_pred HHHHHHHHcCCCCccEEEEEechhhHHHhhhhhh
Q psy16575 88 QFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 88 ~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~ 121 (247)
-+++.|.+.++.+ -.+.|-|.||.+|+.++..
T Consensus 85 GVlkaL~e~gl~p--~~i~GsSaGAivaa~~~~~ 116 (323)
T cd07231 85 GVVRTLVEHQLLP--RVIAGSSVGSIVCAIIATR 116 (323)
T ss_pred HHHHHHHHcCCCC--CEEEEECHHHHHHHHHHcC
Confidence 3455566667643 3599999999999887754
No 291
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=32.63 E-value=34 Score=31.23 Aligned_cols=38 Identities=18% Similarity=0.197 Sum_probs=27.3
Q ss_pred HHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhccCccc
Q psy16575 88 QFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLTHRMH 127 (247)
Q Consensus 88 ~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~ 127 (247)
-+++.|.+.|+.++ .+.|-|.||.+|+.++...++.+.
T Consensus 100 Gv~kaL~e~gl~p~--~i~GtS~Gaivaa~~a~~~~~e~~ 137 (391)
T cd07229 100 GVVKALWLRGLLPR--IITGTATGALIAALVGVHTDEELL 137 (391)
T ss_pred HHHHHHHHcCCCCc--eEEEecHHHHHHHHHHcCCHHHHH
Confidence 35566777777443 599999999999988876444333
No 292
>PF02492 cobW: CobW/HypB/UreG, nucleotide-binding domain; InterPro: IPR003495 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. CobW proteins are generally found proximal to the trimeric cobaltochelatase subunit CobN, which is essential for vitamin B12 (cobalamin) biosynthesis []. They contain a P-loop nucleotide-binding loop in the N-terminal domain and a histidine-rich region in the C-terminal portion suggesting a role in metal binding, possibly as an intermediary between the cobalt transport and chelation systems. CobW might be involved in cobalt reduction leading to cobalt(I) corrinoids. This entry represents CobW-like proteins, including P47K (P31521 from SWISSPROT), a Pseudomonas chlororaphis protein needed for nitrile hydratase expression [], and urease accessory protein UreG, which acts as a chaperone in the activation of urease upon insertion of nickel into the active site [].; PDB: 2WSM_B 1NIJ_A 2HF9_A 2HF8_B.
Probab=32.21 E-value=40 Score=26.76 Aligned_cols=22 Identities=32% Similarity=0.401 Sum_probs=16.1
Q ss_pred eEEEEeCCCCCCCCChHHHHHH
Q psy16575 27 NVIIIHGFNQSESQSPMTIIRD 48 (247)
Q Consensus 27 ~vv~iHG~~~~~~~~~~~~l~~ 48 (247)
++++|.||.+++.......+.+
T Consensus 1 Pv~ii~GfLGsGKTTli~~ll~ 22 (178)
T PF02492_consen 1 PVIIITGFLGSGKTTLINHLLK 22 (178)
T ss_dssp -EEEEEESTTSSHHHHHHHHHH
T ss_pred CEEEEEcCCCCCHHHHHHHHHH
Confidence 5789999999997655555553
No 293
>PF01935 DUF87: Domain of unknown function DUF87; InterPro: IPR002789 The function of this domain is unknown. It contains several conserved aspartates and histidines that could be metal ligands.
Probab=32.16 E-value=61 Score=26.61 Aligned_cols=38 Identities=16% Similarity=0.339 Sum_probs=29.3
Q ss_pred EEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCC
Q psy16575 28 VIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFAD 65 (247)
Q Consensus 28 vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~ 65 (247)
=+.|=|-+|++.+.....+...++++.+..++++|+.+
T Consensus 25 H~~I~G~TGsGKS~~~~~ll~~l~~~~~~~~ii~D~~G 62 (229)
T PF01935_consen 25 HIAIFGTTGSGKSNTVKVLLEELLKKKGAKVIIFDPHG 62 (229)
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 45577999998776667777767646679999999875
No 294
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=31.72 E-value=1.1e+02 Score=24.11 Aligned_cols=33 Identities=18% Similarity=0.197 Sum_probs=24.0
Q ss_pred HHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhh
Q psy16575 87 AQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 87 ~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~ 121 (247)
.-+++.|.+.+++ -=.++|-|.||.+|..++..
T Consensus 16 ~Gvl~~L~e~g~~--~d~i~GtSaGAi~aa~~a~g 48 (175)
T cd07228 16 IGVLRALEEEGIE--IDIIAGSSIGALVGALYAAG 48 (175)
T ss_pred HHHHHHHHHCCCC--eeEEEEeCHHHHHHHHHHcC
Confidence 3455666666663 45789999999999777654
No 295
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=31.33 E-value=64 Score=29.88 Aligned_cols=39 Identities=23% Similarity=0.384 Sum_probs=30.9
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcC
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDF 63 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~ 63 (247)
.+|.+|++-|..+++.+.....++. ++.+.|++|.+++-
T Consensus 98 ~~~~vi~lvG~~GvGKTTtaaKLA~-~l~~~G~kV~lV~~ 136 (429)
T TIGR01425 98 GKQNVIMFVGLQGSGKTTTCTKLAY-YYQRKGFKPCLVCA 136 (429)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHH-HHHHCCCCEEEEcC
Confidence 4589999999999997766777776 66666788888763
No 296
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=30.43 E-value=99 Score=25.36 Aligned_cols=34 Identities=21% Similarity=0.144 Sum_probs=24.6
Q ss_pred HHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhc
Q psy16575 87 AQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 87 ~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~ 122 (247)
.-+++.|.+.++ .--.++|-|.||.+|..++...
T Consensus 14 ~Gvl~aL~e~g~--~~d~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 14 AGVLKALAEAGI--EPDIISGTSIGAINGALIAGGD 47 (215)
T ss_pred HHHHHHHHHcCC--CCCEEEEECHHHHHHHHHHcCC
Confidence 335566666676 3447899999999997777654
No 297
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.37 E-value=90 Score=25.07 Aligned_cols=67 Identities=15% Similarity=0.225 Sum_probs=40.2
Q ss_pred CeEEEEeCCCCCCCCChHHHHHHHHHhcCCc-EEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEE
Q psy16575 26 RNVIIIHGFNQSESQSPMTIIRDAYIRRRDY-NVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIH 104 (247)
Q Consensus 26 ~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~-~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~ 104 (247)
.+||+.-||+..++ .... +....++ -++.+||....-.-.+ . ..+.|.
T Consensus 12 ~LIvyFaGwgtpps--~v~H----LilpeN~dl~lcYDY~dl~ldfDf--------------s-----------Ay~hir 60 (214)
T COG2830 12 HLIVYFAGWGTPPS--AVNH----LILPENHDLLLCYDYQDLNLDFDF--------------S-----------AYRHIR 60 (214)
T ss_pred EEEEEEecCCCCHH--HHhh----ccCCCCCcEEEEeehhhcCcccch--------------h-----------hhhhhh
Confidence 37888888877663 2333 2222334 4567788765432100 0 125678
Q ss_pred EEEechhhHHHhhhhhhcc
Q psy16575 105 CVGHSLGAHICGMMSNHLT 123 (247)
Q Consensus 105 liGhSlGg~va~~~a~~~~ 123 (247)
||.+|||-.||-.+.+.++
T Consensus 61 lvAwSMGVwvAeR~lqg~~ 79 (214)
T COG2830 61 LVAWSMGVWVAERVLQGIR 79 (214)
T ss_pred hhhhhHHHHHHHHHHhhcc
Confidence 8999999999877776553
No 298
>PF08255 Leader_Trp: Trp-operon Leader Peptide; InterPro: IPR013205 The tryptophan operon regulatory region of Citrobacter freundii (leader transcript) encodes a 14-residue peptide containing characteristic tandem tryptophan residues. It is about 10 nucleotides shorter than those of Escherichia coli and Salmonella typhimurium [].
Probab=30.19 E-value=32 Score=15.60 Aligned_cols=11 Identities=18% Similarity=0.561 Sum_probs=8.0
Q ss_pred CeEEEEeCCCC
Q psy16575 26 RNVIIIHGFNQ 36 (247)
Q Consensus 26 ~~vv~iHG~~~ 36 (247)
..+|-+|||+-
T Consensus 2 ~a~~~L~~WWr 12 (14)
T PF08255_consen 2 KATFSLHGWWR 12 (14)
T ss_pred ceEEEEeeEEE
Confidence 35788899864
No 299
>PRK12467 peptide synthase; Provisional
Probab=30.15 E-value=2.4e+02 Score=33.95 Aligned_cols=106 Identities=15% Similarity=0.058 Sum_probs=59.7
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccE
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDI 103 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i 103 (247)
..+.++.+|...+..- .+..+.. .+.. +..|+.+..+...... . .....+.+.....+.+.+... ..+.
T Consensus 3691 ~~~~l~~~h~~~r~~~--~~~~l~~-~l~~-~~~~~~l~~~~~~~d~-~--~~~~~~~~~~~y~~~~~~~~~----~~p~ 3759 (3956)
T PRK12467 3691 GFPALFCRHEGLGTVF--DYEPLAV-ILEG-DRHVLGLTCRHLLDDG-W--QDTSLQAMAVQYADYILWQQA----KGPY 3759 (3956)
T ss_pred cccceeeechhhcchh--hhHHHHH-HhCC-CCcEEEEecccccccc-C--CccchHHHHHHHHHHHHHhcc----CCCe
Confidence 3466999999766652 2334433 4443 4777877665432211 0 111233344444444443322 2468
Q ss_pred EEEEechhhHHHhhhhhhc---cCcccceeeecCCCcccc
Q psy16575 104 HCVGHSLGAHICGMMSNHL---THRMHKIIGIDPARPLVD 140 (247)
Q Consensus 104 ~liGhSlGg~va~~~a~~~---~~~v~~i~~LdPa~p~f~ 140 (247)
++.|+|+||.++..+++.+ .+.+.-+..+|...|.+.
T Consensus 3760 ~l~g~s~g~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 3799 (3956)
T PRK12467 3760 GLLGWSLGGTLARLVAELLEREGESEAFLGLFDNTLPLPD 3799 (3956)
T ss_pred eeeeeecchHHHHHHHHHHHHcCCceeEEEEEeccccccc
Confidence 9999999999998877764 344555555665555543
No 300
>KOG0370|consensus
Probab=29.89 E-value=2.9e+02 Score=28.68 Aligned_cols=103 Identities=13% Similarity=0.102 Sum_probs=54.8
Q ss_pred CCeEEEEeC---CCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHh-hcHHHHHHHHHHHHHHHHHcCCCC
Q psy16575 25 KRNVIIIHG---FNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSL-SNTRLVAQCAAQFYSHLTHHGASA 100 (247)
Q Consensus 25 ~~~vv~iHG---~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~-~~~~~v~~~l~~~i~~l~~~~~~~ 100 (247)
+.++|+=-| .+++-..+|...-.-+-|++.|+..|+++|..-.-+..|.... ...+.+. +..+++... .. +.
T Consensus 919 ~g~mVlGsGvYrIGSSVEFDwcaV~~~rtLr~~g~kTimvNyNPETVSTDyDecdrLYFeeis--~E~vmDiYe-~E-~~ 994 (1435)
T KOG0370|consen 919 HGVMVLGSGVYRIGSSVEFDWCAVGCARTLRKLGKKTIMVNYNPETVSTDYDECDRLYFEEIS--YERVMDIYE-LE-NS 994 (1435)
T ss_pred CceEEEcccceecccceeechhhhhHHHHHHHcCCceEEEecCcccccCchHHHhhHhHhhhh--hhhhhhhhh-hc-cC
Confidence 356666566 3444444554332223567778999999999876665564322 1122221 222222211 11 12
Q ss_pred ccEEEEEechhhHHHhhhhhhccCcccceeeecC
Q psy16575 101 YDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDP 134 (247)
Q Consensus 101 ~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdP 134 (247)
+-+.+ ||||++.-.+|..+.+.--+|.|.+|
T Consensus 995 ~G~ii---s~GGQ~pnNiA~~L~r~~~kilGTsP 1025 (1435)
T KOG0370|consen 995 EGIII---SVGGQLPNNIALKLHRNGVKILGTSP 1025 (1435)
T ss_pred CceEE---EecCcCcchhhhHhHhcCCeEecCCh
Confidence 34443 99999997777655433345555544
No 301
>KOG0780|consensus
Probab=29.59 E-value=95 Score=28.58 Aligned_cols=39 Identities=23% Similarity=0.433 Sum_probs=31.9
Q ss_pred CCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEE
Q psy16575 22 DPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFML 61 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~v 61 (247)
...+|.||++-|..++........++. |+++.||.+.++
T Consensus 97 ~K~kpsVimfVGLqG~GKTTtc~KlA~-y~kkkG~K~~Lv 135 (483)
T KOG0780|consen 97 KKGKPSVIMFVGLQGSGKTTTCTKLAY-YYKKKGYKVALV 135 (483)
T ss_pred ccCCCcEEEEEeccCCCcceeHHHHHH-HHHhcCCceeEE
Confidence 456799999999999987767778886 888888987766
No 302
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=29.14 E-value=70 Score=26.47 Aligned_cols=24 Identities=21% Similarity=0.070 Sum_probs=19.7
Q ss_pred CccEEEEEechhhHHHhhhhhhcc
Q psy16575 100 AYDIHCVGHSLGAHICGMMSNHLT 123 (247)
Q Consensus 100 ~~~i~liGhSlGg~va~~~a~~~~ 123 (247)
..+....|+++|+..++.+....+
T Consensus 131 ~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 131 LGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred cCcceEEEEEeeccchHHHhhcch
Confidence 368899999999999888877765
No 303
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=28.99 E-value=1.9e+02 Score=23.35 Aligned_cols=44 Identities=16% Similarity=0.181 Sum_probs=26.7
Q ss_pred CCeEEEEeCCCCCCCCC-hHHHHHHHHHhcCCcEEEEEcCCCCCCC
Q psy16575 25 KRNVIIIHGFNQSESQS-PMTIIRDAYIRRRDYNVFMLDFADLAPF 69 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~-~~~~l~~~~l~~~~~~Vi~vD~~~~~~~ 69 (247)
+.+++++||-.+..-.. +.....+ +|++.+.+|-...|.+.+..
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~-~L~~~~~~v~~~~~~g~gH~ 199 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAE-FLKAAGANVEFHEYPGGGHE 199 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHH-HHHCTT-GEEEEEETT-SSS
T ss_pred CCcEEEEecCCCCcccHHHHHHHHH-HHHhcCCCEEEEEcCCCCCC
Confidence 45799999976664321 3344444 78877788888888766554
No 304
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=28.81 E-value=69 Score=27.05 Aligned_cols=31 Identities=19% Similarity=0.311 Sum_probs=21.4
Q ss_pred HHHHHHHcCCCC-ccE-EEEEechhhHHHhhhh
Q psy16575 89 FYSHLTHHGASA-YDI-HCVGHSLGAHICGMMS 119 (247)
Q Consensus 89 ~i~~l~~~~~~~-~~i-~liGhSlGg~va~~~a 119 (247)
+++.|.+.++.+ +++ .++|-|+||.+|..++
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a 49 (246)
T cd07222 17 AAKALLRHGKKLLKRVKRFAGASAGSLVAAVLL 49 (246)
T ss_pred HHHHHHHcCchhhccCCEEEEECHHHHHHHHHh
Confidence 444555555531 234 7999999999998776
No 305
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=28.70 E-value=2.2e+02 Score=22.75 Aligned_cols=66 Identities=9% Similarity=0.147 Sum_probs=36.6
Q ss_pred EEEEeCCCCCCCCChHHHHHHHHHhc---CCcEEEEEcCCCCCCC-----CChH--HHhhcHHHHHHHHHHHHHHH
Q psy16575 28 VIIIHGFNQSESQSPMTIIRDAYIRR---RDYNVFMLDFADLAPF-----PCYL--SSLSNTRLVAQCAAQFYSHL 93 (247)
Q Consensus 28 vv~iHG~~~~~~~~~~~~l~~~~l~~---~~~~Vi~vD~~~~~~~-----~~y~--~~~~~~~~v~~~l~~~i~~l 93 (247)
=++|-|-++++.+.....+...++.. .+..++++|..+.... +.-. ....+.+.+.+.+..+.+.+
T Consensus 40 h~li~G~tgsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~em 115 (205)
T PF01580_consen 40 HLLIAGATGSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGSDLAPLADLPHVAAVAVATDPEEILRLLEELVEEM 115 (205)
T ss_dssp SEEEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSSCCGGGTT-TTBSS-S-B-SHHHHHHHHHHHHHHH
T ss_pred eEEEEcCCCCCccHHHHHHHHHHHHHhcCCccEEEEEcCCccccchhhhhhhhccccccccHHHHHHHHHHHHHHH
Confidence 56778888888766666666556552 5799999998854211 1100 12335566666666555554
No 306
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=28.58 E-value=49 Score=25.32 Aligned_cols=39 Identities=21% Similarity=0.363 Sum_probs=25.4
Q ss_pred eEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCC
Q psy16575 27 NVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADL 66 (247)
Q Consensus 27 ~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~ 66 (247)
++|.|-|+.+++.+.....+.+ +|.+.|++|.++=....
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~-~l~~~g~~v~~ik~~~~ 39 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLIN-ELKRRGYRVAVIKHTDH 39 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHH-HHHHTT--EEEEEE-ST
T ss_pred CEEEEECCCCCCHHHHHHHHHH-HHhHcCCceEEEEEccC
Confidence 4788899988887767778887 55556799885544444
No 307
>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=27.70 E-value=2.2e+02 Score=25.34 Aligned_cols=81 Identities=21% Similarity=0.269 Sum_probs=53.2
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHh-cCCcEEEEEcCCC-CCCCCChHHHhhcHHHHHHHHHHHHHHHHH-cCCCC
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIR-RRDYNVFMLDFAD-LAPFPCYLSSLSNTRLVAQCAAQFYSHLTH-HGASA 100 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~-~~~~~Vi~vD~~~-~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~-~~~~~ 100 (247)
...-+|+|-|=++++.+.....+.+ |++ ....+++.+.=+- +-.. -..+.-+-+.++.+...|-+.|+. +.-+
T Consensus 123 ~~~GLILVTGpTGSGKSTTlAamId-~iN~~~~~HIlTIEDPIE~vh~--skkslI~QREvG~dT~sF~~aLraALReD- 198 (353)
T COG2805 123 SPRGLILVTGPTGSGKSTTLAAMID-YINKHKAKHILTIEDPIEYVHE--SKKSLINQREVGRDTLSFANALRAALRED- 198 (353)
T ss_pred CCCceEEEeCCCCCcHHHHHHHHHH-HHhccCCcceEEecCchHhhhc--chHhhhhHHHhcccHHHHHHHHHHHhhcC-
Confidence 3456899999999998777788887 554 4557787775221 0000 113445668888888888887763 3334
Q ss_pred ccEEEEEe
Q psy16575 101 YDIHCVGH 108 (247)
Q Consensus 101 ~~i~liGh 108 (247)
.+|.|||-
T Consensus 199 PDVIlvGE 206 (353)
T COG2805 199 PDVILVGE 206 (353)
T ss_pred CCEEEEec
Confidence 47899985
No 308
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=27.60 E-value=87 Score=24.23 Aligned_cols=33 Identities=24% Similarity=0.210 Sum_probs=22.5
Q ss_pred HHHHHHHHHcCCCCccEEEEEechhhHHHhhhh
Q psy16575 87 AQFYSHLTHHGASAYDIHCVGHSLGAHICGMMS 119 (247)
Q Consensus 87 ~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a 119 (247)
.-+++.|.+.++...--.+.|-|.||.++..++
T Consensus 14 ~gvl~~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 14 AGVLSALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 334555555554324457889999999998877
No 309
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=27.51 E-value=63 Score=28.53 Aligned_cols=28 Identities=25% Similarity=0.277 Sum_probs=19.8
Q ss_pred HHHcCCCCccEEEEEechhhHHHhhhhh
Q psy16575 93 LTHHGASAYDIHCVGHSLGAHICGMMSN 120 (247)
Q Consensus 93 l~~~~~~~~~i~liGhSlGg~va~~~a~ 120 (247)
+.+.+...++..+.|||||=.-|..++.
T Consensus 77 l~~~~~~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 77 LAEQGLGVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred HHHhcCCCCCceeecccHhHHHHHHHcc
Confidence 4444424477899999999887766654
No 310
>TIGR02802 Pal_lipo peptidoglycan-associated lipoprotein. Members of this protein are Pal (also called OprL), the Peptidoglycan-Associated Lipoprotein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The seed alignment for this model includes only the conserved C-terminal domain.
Probab=27.27 E-value=2.3e+02 Score=19.98 Aligned_cols=61 Identities=20% Similarity=0.138 Sum_probs=32.7
Q ss_pred HHHHHHHHHh-cCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEEEEec
Q psy16575 43 MTIIRDAYIR-RRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHCVGHS 109 (247)
Q Consensus 43 ~~~l~~~~l~-~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~liGhS 109 (247)
...+++ +|. ..++.|.+.-+....... ..+...-.+....+.++|.+.|++.++|.++||.
T Consensus 19 L~~~a~-~l~~~~~~~i~I~Ghtd~~g~~-----~~N~~LS~~RA~~V~~~L~~~gi~~~ri~~~g~G 80 (104)
T TIGR02802 19 LDAHAA-YLKKNPSVRVTIEGHTDERGTR-----EYNLALGERRANAVKDYLQAKGVSASQIETVSYG 80 (104)
T ss_pred HHHHHH-HHHHCCCcEEEEEEecCCCCCH-----HHHHHHHHHHHHHHHHHHHHcCCCHHHeEEEeec
Confidence 344554 444 345566665554332221 1222223334444555566789988899998873
No 311
>TIGR00455 apsK adenylylsulfate kinase (apsK). Important residue (active site in E.coli) is residue 100 of the seed alignment.
Probab=27.15 E-value=87 Score=24.73 Aligned_cols=38 Identities=24% Similarity=0.492 Sum_probs=27.8
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEc
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLD 62 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD 62 (247)
.++.+|++.|..+++.+.....+.. .+...++.++.+|
T Consensus 16 ~~~~~i~i~G~~GsGKstla~~l~~-~l~~~~~~~~~l~ 53 (184)
T TIGR00455 16 HRGVVIWLTGLSGSGKSTIANALEK-KLESKGYRVYVLD 53 (184)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHH-HHHHcCCcEEEEC
Confidence 4578999999999997655666665 4455567777775
No 312
>PF08250 Sperm_act_pep: Sperm-activating peptides; InterPro: IPR013254 The sperm-activating peptides (SAPs) are isolated in egg-conditioned media (egg jelly) of sea urchins. SAPs have several effects on sea urchin spermatozoa: stimulate sperm respiration and motility through intracellular alkalinization, transient elevation of cAMP, cGMP and Ca2+ levels in sperm cells [, ].
Probab=26.42 E-value=18 Score=14.87 Aligned_cols=6 Identities=67% Similarity=1.099 Sum_probs=3.0
Q ss_pred Eechhh
Q psy16575 107 GHSLGA 112 (247)
Q Consensus 107 GhSlGg 112 (247)
|++|||
T Consensus 1 gf~l~G 6 (10)
T PF08250_consen 1 GFSLGG 6 (10)
T ss_pred Cccccc
Confidence 455554
No 313
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=26.40 E-value=68 Score=30.67 Aligned_cols=26 Identities=12% Similarity=-0.091 Sum_probs=19.8
Q ss_pred HcCCCCccEEEEEechhhHHHhhhhhhc
Q psy16575 95 HHGASAYDIHCVGHSLGAHICGMMSNHL 122 (247)
Q Consensus 95 ~~~~~~~~i~liGhSlGg~va~~~a~~~ 122 (247)
+.|+ ++-.++|||||=..|..++--+
T Consensus 261 ~~GI--~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 261 EFAI--KPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred hcCC--CCCEEeecCHHHHHHHHHhCCC
Confidence 5676 5569999999988887766544
No 314
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=25.96 E-value=1.4e+02 Score=26.15 Aligned_cols=32 Identities=19% Similarity=0.219 Sum_probs=22.7
Q ss_pred HHHHHHHHcCCCCccEEEEEechhhHHHhhhhhh
Q psy16575 88 QFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 88 ~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~ 121 (247)
-+++.|.+.++.+ =.+.|-|.||.+|+.++..
T Consensus 86 Gvl~aL~e~~l~~--~~i~GtSaGAi~aa~~~~~ 117 (298)
T cd07206 86 GVVKALWEQDLLP--RVISGSSAGAIVAALLGTH 117 (298)
T ss_pred HHHHHHHHcCCCC--CEEEEEcHHHHHHHHHHcC
Confidence 3445555666643 3699999999999877743
No 315
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=25.48 E-value=2.6e+02 Score=27.08 Aligned_cols=46 Identities=20% Similarity=0.261 Sum_probs=29.8
Q ss_pred CCCCeEEEEeCCCCCCCC-ChHHHHHHHHHhcCCcEEEEEcCCCCCCC
Q psy16575 23 PHKRNVIIIHGFNQSESQ-SPMTIIRDAYIRRRDYNVFMLDFADLAPF 69 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~-~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~ 69 (247)
.-+.++++|||-.+..-. +....+.+ .|++.|.+|-.+=++..+..
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~-aL~~~g~~~~~~~~p~e~H~ 595 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVD-ALKRKGKPVELVVFPDEGHG 595 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHH-HHHHcCceEEEEEeCCCCcC
Confidence 345789999996665432 12334444 45667899888888776554
No 316
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=25.02 E-value=1.4e+02 Score=25.15 Aligned_cols=34 Identities=18% Similarity=0.038 Sum_probs=23.5
Q ss_pred HHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhh
Q psy16575 87 AQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 87 ~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~ 121 (247)
.-+++.|.+.++. .-=.++|-|.||.+|..++..
T Consensus 14 ~Gvl~al~e~~~~-~fd~i~GtSaGAi~a~~~~~g 47 (266)
T cd07208 14 AGVLDAFLEAGIR-PFDLVIGVSAGALNAASYLSG 47 (266)
T ss_pred HHHHHHHHHcCCC-CCCEEEEECHHHHhHHHHHhC
Confidence 4456666666653 133789999999999776544
No 317
>KOG1282|consensus
Probab=24.97 E-value=1.3e+02 Score=28.06 Aligned_cols=97 Identities=14% Similarity=0.164 Sum_probs=53.6
Q ss_pred CCCeEEEEeCCCCCCCCC-hHHHHHHHHHh-------------cCCcEEEEEcCCCCCCCCChHHHh----hcHHHHHHH
Q psy16575 24 HKRNVIIIHGFNQSESQS-PMTIIRDAYIR-------------RRDYNVFMLDFADLAPFPCYLSSL----SNTRLVAQC 85 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~-~~~~l~~~~l~-------------~~~~~Vi~vD~~~~~~~~~y~~~~----~~~~~v~~~ 85 (247)
++|+||.+-|-.+-.+.. ...++-.-... ..-.|++-+|-+-.... .|.... .+-+.++++
T Consensus 72 ~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGF-SYs~~~~~~~~~D~~~A~d 150 (454)
T KOG1282|consen 72 TDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGF-SYSNTSSDYKTGDDGTAKD 150 (454)
T ss_pred CCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCc-cccCCCCcCcCCcHHHHHH
Confidence 478999999987765321 11111110000 01257888887754332 132221 234455555
Q ss_pred HHHHHH-HHHHc-CCCCccEEEEEechhhHHHhhhhhh
Q psy16575 86 AAQFYS-HLTHH-GASAYDIHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 86 l~~~i~-~l~~~-~~~~~~i~liGhSlGg~va~~~a~~ 121 (247)
+-.++. ++.+. ....++++|.|-|-+||..-.+|+.
T Consensus 151 ~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~ 188 (454)
T KOG1282|consen 151 NYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQE 188 (454)
T ss_pred HHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHH
Confidence 555554 35543 2334799999999999877555554
No 318
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=24.84 E-value=3.8e+02 Score=21.75 Aligned_cols=64 Identities=14% Similarity=0.167 Sum_probs=39.8
Q ss_pred cEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEEEEech----hhHHHhhhhhhcc-Cccccee
Q psy16575 56 YNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHCVGHSL----GAHICGMMSNHLT-HRMHKII 130 (247)
Q Consensus 56 ~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~liGhSl----Gg~va~~~a~~~~-~~v~~i~ 130 (247)
-.|+.+|-...... +.+..++.+.++++. .+ -.+.|+|+|. |..++..++.++. ..+..++
T Consensus 78 d~V~~~~~~~~~~~--------~~e~~a~al~~~i~~---~~---p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~ 143 (202)
T cd01714 78 DRAILVSDRAFAGA--------DTLATAKALAAAIKK---IG---VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVS 143 (202)
T ss_pred CEEEEEecccccCC--------ChHHHHHHHHHHHHH---hC---CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEE
Confidence 36777665443322 344455555555433 22 3799999999 8889988888765 4555666
Q ss_pred eec
Q psy16575 131 GID 133 (247)
Q Consensus 131 ~Ld 133 (247)
.|.
T Consensus 144 ~l~ 146 (202)
T cd01714 144 KIE 146 (202)
T ss_pred EEE
Confidence 664
No 319
>PRK03846 adenylylsulfate kinase; Provisional
Probab=24.75 E-value=1e+02 Score=24.70 Aligned_cols=39 Identities=18% Similarity=0.331 Sum_probs=27.3
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEc
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLD 62 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD 62 (247)
..+|.+|.+.|..+++.+.....+.. .+...+..++.+|
T Consensus 21 ~~~~~~i~i~G~~GsGKSTla~~l~~-~l~~~~~~~~~ld 59 (198)
T PRK03846 21 GHKGVVLWFTGLSGSGKSTVAGALEE-ALHELGVSTYLLD 59 (198)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHH-HHHhCCCCEEEEc
Confidence 35788999999999887655555555 4444467777776
No 320
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=24.68 E-value=93 Score=26.35 Aligned_cols=33 Identities=15% Similarity=-0.005 Sum_probs=20.5
Q ss_pred HHHHHHHcCCCCccEEEEEechhhHHHhhhhhh
Q psy16575 89 FYSHLTHHGASAYDIHCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 89 ~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~ 121 (247)
+++.|.+.+.....-.+.|-|+||.+|..++..
T Consensus 18 Vl~aL~e~g~~~~~d~i~GtSAGAl~aa~~a~g 50 (245)
T cd07218 18 VAVCLKKYAPHLLLNKISGASAGALAACCLLCD 50 (245)
T ss_pred HHHHHHHhCcccCCCeEEEEcHHHHHHHHHHhC
Confidence 444555555221122399999999999776543
No 321
>PLN02757 sirohydrochlorine ferrochelatase
Probab=24.38 E-value=2e+02 Score=22.47 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=18.7
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcE
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYN 57 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~ 57 (247)
....+|+-||-........+..+++.+.++.++.
T Consensus 13 ~~~lllvgHGSrd~~a~~~~~~la~~l~~~~~~~ 46 (154)
T PLN02757 13 KDGVVIVDHGSRRKESNLMLEEFVAMYKQKTGHP 46 (154)
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHHHhhCCCC
Confidence 3467888899554432234556665443444443
No 322
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=24.07 E-value=3.3e+02 Score=21.35 Aligned_cols=62 Identities=11% Similarity=0.077 Sum_probs=31.2
Q ss_pred hHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhccCcccceeeecCCC
Q psy16575 72 YLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKIIGIDPAR 136 (247)
Q Consensus 72 y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~~LdPa~ 136 (247)
|..-...+..+.+.+.++++.+...+ ++|.+.|=|..|..-..+...-+..|.-++=.+|..
T Consensus 43 y~~f~~~~~~~~~~l~~~L~~~~~~g---k~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np~K 104 (160)
T PF08484_consen 43 YENFAKRVEQSKAELREFLEKLKAEG---KRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNPLK 104 (160)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT-----EEEE---SHHHHHHHHHT--TTTS--EEES-GGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC---CEEEEECcchHHHHHHHHhCCCcceeEEEEeCChhh
Confidence 44444455556666666666665544 689999988887765554443344466666556554
No 323
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=23.95 E-value=5.2e+02 Score=23.01 Aligned_cols=102 Identities=16% Similarity=0.201 Sum_probs=59.5
Q ss_pred CeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCC---Ch------------HHHhh----cHHHHHHHH
Q psy16575 26 RNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFP---CY------------LSSLS----NTRLVAQCA 86 (247)
Q Consensus 26 ~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~---~y------------~~~~~----~~~~v~~~l 86 (247)
+..|+|-|-.+...+ ....+++ ..++.|-.++.+|-+-..+.+ .+ .++.. .-..++..-
T Consensus 2 ~krIyVvgT~DTKg~-EL~ylad-~I~~aG~~~v~vDvs~~~~~~~~~dis~~~VA~~hp~~~qAv~~~~Drg~AiaaMa 79 (401)
T COG5441 2 MKRIYVVGTADTKGE-ELAYLAD-LIEAAGGSPVLVDVSTLRNPTSEVDISAEDVAGAHPGGRQAVLDGNDRGSAIAAMA 79 (401)
T ss_pred CceEEEEecCCCcch-hHHHHHH-HHHHcCCCeEEEEeeccCCCCCCcccCHHHHhhhCCCcceeEeccCchhHHHHHHH
Confidence 356788887666553 4566666 667778999999977532211 00 00000 011222222
Q ss_pred HHHHHHHHHcCCCCccEEEEEechhhHHHhhhhhhccCccccee
Q psy16575 87 AQFYSHLTHHGASAYDIHCVGHSLGAHICGMMSNHLTHRMHKII 130 (247)
Q Consensus 87 ~~~i~~l~~~~~~~~~i~liGhSlGg~va~~~a~~~~~~v~~i~ 130 (247)
..|.+++.+.+ +..-+.=+|-|.|-.++.-+.+.+|--+.+++
T Consensus 80 ~A~~r~l~sR~-dV~gmig~GGsgGT~lit~~m~~LPlgvPK~m 122 (401)
T COG5441 80 EAFVRFLSSRG-DVAGMIGMGGSGGTALITPAMRRLPLGVPKVM 122 (401)
T ss_pred HHHHHHhhccc-chhheeecCCCcchHhhhhHHHhcCcCCccee
Confidence 33444444332 45678888999999998888888875555543
No 324
>PF00691 OmpA: OmpA family; InterPro: IPR006665 This entry represents domain with a beta/alpha/beta/alpha-beta(2) structure found in the C-terminal region of many Gram-negative bacterial outer membrane proteins [], such as porin-like integral membrane proteins (such as ompA) [], small lipid-anchored proteins (such as pal) [], and MotB proton channels []. The N-terminal half is variable although some of the proteins in this group have the OmpA-like transmembrane domain IPR000498 from INTERPRO at the N terminus. OmpA from Escherichia coli is required for pathogenesis, and can interact with host receptor molecules []. MotB (and MotA) serves two functions in E. coli, the MotA(4)-MotB(2) complex attaches to the cell wall via MotB to form the stator of the flagellar motor, and the MotA-MotB complex couples the flow of ions across the cell membrane to movement of the rotor [].; GO: 0009279 cell outer membrane; PDB: 1OAP_A 2W8B_G 2HQS_C 4ERH_A 2ZF8_A 2ZOV_A 2ZVZ_B 2ZVY_A 3TD4_B 3TD5_D ....
Probab=23.77 E-value=2.5e+02 Score=19.25 Aligned_cols=33 Identities=24% Similarity=0.232 Sum_probs=22.4
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCccEEEEEech
Q psy16575 78 NTRLVAQCAAQFYSHLTHHGASAYDIHCVGHSL 110 (247)
Q Consensus 78 ~~~~v~~~l~~~i~~l~~~~~~~~~i~liGhSl 110 (247)
+...-.+....+.++|...|++.++|.+.|+.-
T Consensus 48 n~~LS~~RA~~V~~~L~~~gi~~~ri~~~~~G~ 80 (97)
T PF00691_consen 48 NQELSQRRAEAVKQYLVENGIPPERISVVGYGE 80 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSGGGEEEEEETT
T ss_pred HhHHHHHHHHHHHHHHHHcCCChHhEEEEEEcc
Confidence 334444455556666777899999998887653
No 325
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=23.68 E-value=1.2e+02 Score=26.59 Aligned_cols=35 Identities=14% Similarity=0.109 Sum_probs=21.7
Q ss_pred HHHHHHHHH-cCCCC-ccE-EEEEechhhHHHhhhhhh
Q psy16575 87 AQFYSHLTH-HGASA-YDI-HCVGHSLGAHICGMMSNH 121 (247)
Q Consensus 87 ~~~i~~l~~-~~~~~-~~i-~liGhSlGg~va~~~a~~ 121 (247)
..+++.|++ .+.+. +.+ .+.|-|+||.||..++..
T Consensus 15 i~vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g 52 (312)
T cd07212 15 IQMLIAIEKALGRPIRELFDWIAGTSTGGILALALLHG 52 (312)
T ss_pred HHHHHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcC
Confidence 334555554 34322 223 478999999999877753
No 326
>PRK06696 uridine kinase; Validated
Probab=23.40 E-value=1.2e+02 Score=24.95 Aligned_cols=37 Identities=16% Similarity=0.191 Sum_probs=27.9
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEE
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFM 60 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~ 60 (247)
...|.+|.|-|..+++.+.....|++ .|...|..|+.
T Consensus 19 ~~~~~iI~I~G~sgsGKSTlA~~L~~-~l~~~g~~v~~ 55 (223)
T PRK06696 19 LTRPLRVAIDGITASGKTTFADELAE-EIKKRGRPVIR 55 (223)
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHH-HHHHcCCeEEE
Confidence 45789999999999997766667776 45555677766
No 327
>PRK14468 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=22.67 E-value=3.7e+02 Score=23.96 Aligned_cols=90 Identities=18% Similarity=0.189 Sum_probs=54.8
Q ss_pred EEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEEEE
Q psy16575 28 VIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHCVG 107 (247)
Q Consensus 28 vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~liG 107 (247)
.+++-|++++. +....+++ ++......|=.+.|...... .|... . .+.+.++.+.|.+.|+ + ..|-
T Consensus 251 yvLI~GvNDs~--e~~~~L~~-ll~~~~~~VnLIPynp~~~~-~~~~p--s----~e~i~~f~~~L~~~Gi---~-vtiR 316 (343)
T PRK14468 251 YTMLKGVNDHL--WQAELLAD-LLRGLVSHVNLIPFNPWEGS-PFQSS--P----RAQILAFADVLERRGV---P-VSVR 316 (343)
T ss_pred EEEeCCCcCCH--HHHHHHHH-HHhcCCcEEEEEcCCCCCCC-CCCCC--C----HHHHHHHHHHHHHCCC---e-EEEe
Confidence 68899988887 33566765 66655566666666654332 12211 1 1355566666777776 2 3568
Q ss_pred echhhHHHhhhhhhccCcccceee
Q psy16575 108 HSLGAHICGMMSNHLTHRMHKIIG 131 (247)
Q Consensus 108 hSlGg~va~~~a~~~~~~v~~i~~ 131 (247)
.|.|.-|.+..|+....+.+.++|
T Consensus 317 ~~~g~di~aaCGqL~~~~~~~~~~ 340 (343)
T PRK14468 317 WSRGRDVGAACGQLALKRPGALTG 340 (343)
T ss_pred CCCCcchhhcCCccccCCcccccc
Confidence 999998887777665444444443
No 328
>PF08373 RAP: RAP domain; InterPro: IPR013584 The ~60-residue RAP (an acronym for RNA-binding domain abundant in Apicomplexans) domain is found in various proteins in eukaryotes. It is particularly abundant in apicomplexans and might mediate a range of cellular functions through its potential interactions with RNA []. The RAP domain consists of multiple blocks of charged and aromatics residues and is predicted to be composed of alpha helical and beta strand structures. Two predicted loop regions that are dominated by glycine and tryptophan residues are found before and after the central beta sheet []. Some proteins known to contain a RAP domain are listed below: Human hypothetical protein MGC5297, Mammalian FAST kinase domain-containing proteins (FASTKDs), Chlamydomonas reinhardtii chloroplastic trans-splicing factor Raa3.
Probab=22.58 E-value=93 Score=19.44 Aligned_cols=22 Identities=14% Similarity=0.327 Sum_probs=17.3
Q ss_pred HHHHHHHHHhcCCcEEEEEcCC
Q psy16575 43 MTIIRDAYIRRRDYNVFMLDFA 64 (247)
Q Consensus 43 ~~~l~~~~l~~~~~~Vi~vD~~ 64 (247)
...++...|++.||+|+.+.|-
T Consensus 19 ~t~lk~r~L~~~G~~Vi~Ip~~ 40 (58)
T PF08373_consen 19 STKLKHRHLKALGYKVISIPYY 40 (58)
T ss_pred HHHHHHHHHHHCCCEEEEecHH
Confidence 4566677899999999999754
No 329
>PRK14456 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=22.23 E-value=3.2e+02 Score=24.72 Aligned_cols=80 Identities=15% Similarity=0.256 Sum_probs=51.7
Q ss_pred EEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHHHHcCCCCccEEEEE
Q psy16575 28 VIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHLTHHGASAYDIHCVG 107 (247)
Q Consensus 28 vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l~~~~~~~~~i~liG 107 (247)
.++|-|+.++. +....+++ +++.....|=.+.|...+..+ |... . .+.+.+|.+.|.+.|+ -..|.
T Consensus 283 yvLI~GvNDs~--eda~~L~~-~l~~~~~~VnlIpyn~~~~~~-~~~p--s----~e~i~~F~~~L~~~Gi----~vtvR 348 (368)
T PRK14456 283 YMLLEGINDSP--EDARKLIR-FASRFFCKINLIDYNSIVNIK-FEPV--C----SSTRERFRDRLLDAGL----QVTVR 348 (368)
T ss_pred EEEEcCCCCCH--HHHHHHHH-HHhcCCCeeEEeeeccCCCCC-CCCC--C----HHHHHHHHHHHHHCCC----cEEee
Confidence 57899988776 34667775 776655566666666655542 3211 1 2346677777777776 36688
Q ss_pred echhhHHHhhhhhh
Q psy16575 108 HSLGAHICGMMSNH 121 (247)
Q Consensus 108 hSlGg~va~~~a~~ 121 (247)
.|.|.-|.+..|+.
T Consensus 349 ~~~G~di~aACGQL 362 (368)
T PRK14456 349 KSYGTTINAACGQL 362 (368)
T ss_pred CCCCcchhhcCCcc
Confidence 99998877665554
No 330
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=22.18 E-value=1.4e+02 Score=27.68 Aligned_cols=42 Identities=12% Similarity=0.211 Sum_probs=30.9
Q ss_pred CCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCC
Q psy16575 23 PHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFA 64 (247)
Q Consensus 23 ~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~ 64 (247)
..+|.++++-|-.+++.+.....++..+..+.|.+|..+|.-
T Consensus 96 ~~~p~vi~~vG~~GsGKTTtaakLA~~l~~~~g~kV~lV~~D 137 (428)
T TIGR00959 96 KKPPTVILMVGLQGSGKTTTCGKLAYYLKKKQGKKVLLVACD 137 (428)
T ss_pred CCCCEEEEEECCCCCcHHHHHHHHHHHHHHhCCCeEEEEecc
Confidence 456889999999999977666777764333457888888743
No 331
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=22.14 E-value=28 Score=29.26 Aligned_cols=38 Identities=13% Similarity=0.360 Sum_probs=27.5
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEc
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLD 62 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD 62 (247)
..|++|++.||-+++.......|.. .+...+++|.++.
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~-~lDPR~~~v~~~~ 66 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIE-WLDPRGFRVHAFG 66 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHC-CS-GGGEEEEE-S
T ss_pred CCcEEEEEeccccCCchHHHHHHHH-hCCCCeeEEEeCC
Confidence 4679999999999986555555554 5666679999986
No 332
>KOG0094|consensus
Probab=21.83 E-value=2.1e+02 Score=23.76 Aligned_cols=72 Identities=18% Similarity=0.271 Sum_probs=42.7
Q ss_pred CCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCCCCCChHHHhhcHHHHHHHHHHHHHHH-HHcCCCCccEEEEEe----c
Q psy16575 35 NQSESQSPMTIIRDAYIRRRDYNVFMLDFADLAPFPCYLSSLSNTRLVAQCAAQFYSHL-THHGASAYDIHCVGH----S 109 (247)
Q Consensus 35 ~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~~~~~y~~~~~~~~~v~~~l~~~i~~l-~~~~~~~~~i~liGh----S 109 (247)
|+....+-++.|+..|.+.....||++|....... +...++|+.+ .+.+.+.--|.|||. |
T Consensus 76 WDTAGQERFrslipsY~Rds~vaviVyDit~~~Sf--------------e~t~kWi~dv~~e~gs~~viI~LVGnKtDL~ 141 (221)
T KOG0094|consen 76 WDTAGQERFRSLIPSYIRDSSVAVIVYDITDRNSF--------------ENTSKWIEDVRRERGSDDVIIFLVGNKTDLS 141 (221)
T ss_pred EecccHHHHhhhhhhhccCCeEEEEEEeccccchH--------------HHHHHHHHHHHhccCCCceEEEEEccccccc
Confidence 34444445778888898877788999987654322 2344555554 344543346778885 4
Q ss_pred hhhHHHhhhhh
Q psy16575 110 LGAHICGMMSN 120 (247)
Q Consensus 110 lGg~va~~~a~ 120 (247)
-..++...-+.
T Consensus 142 dkrqvs~eEg~ 152 (221)
T KOG0094|consen 142 DKRQVSIEEGE 152 (221)
T ss_pred chhhhhHHHHH
Confidence 45555544443
No 333
>PRK00923 sirohydrochlorin cobaltochelatase; Reviewed
Probab=21.56 E-value=2.7e+02 Score=20.46 Aligned_cols=25 Identities=16% Similarity=0.178 Sum_probs=13.3
Q ss_pred CeEEEEeCCCCCCCCChHHHHHHHH
Q psy16575 26 RNVIIIHGFNQSESQSPMTIIRDAY 50 (247)
Q Consensus 26 ~~vv~iHG~~~~~~~~~~~~l~~~~ 50 (247)
..||+-||-........+..++..+
T Consensus 3 ~lvlv~hGS~~~~~~~~~~~~~~~l 27 (126)
T PRK00923 3 GLLLVGHGSRLPYNKEVVTKIAEKI 27 (126)
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHH
Confidence 3577779965432223455556533
No 334
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=21.38 E-value=97 Score=26.10 Aligned_cols=34 Identities=21% Similarity=0.337 Sum_probs=27.1
Q ss_pred eEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEE
Q psy16575 27 NVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFML 61 (247)
Q Consensus 27 ~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~v 61 (247)
++|++-|+.+++...+...+++ .|++.++.|+.+
T Consensus 2 pLiIlTGyPgsGKTtfakeLak-~L~~~i~~vi~l 35 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAK-ELRQEIWRVIHL 35 (261)
T ss_pred ceEEEecCCCCCchHHHHHHHH-HHHHhhhhcccc
Confidence 4788999999998878888887 566666777765
No 335
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=21.21 E-value=4.2e+02 Score=22.95 Aligned_cols=35 Identities=26% Similarity=0.518 Sum_probs=21.2
Q ss_pred eEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCC
Q psy16575 27 NVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFAD 65 (247)
Q Consensus 27 ~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~ 65 (247)
-+|+.|++.+.. ...|..+.-+...+.|++.+=|.
T Consensus 111 ~~ILTh~~S~tv----~~~l~~A~~~gk~~~V~v~EsrP 145 (275)
T PRK08335 111 DVIITHSFSSAV----LEILKTAKRKGKRFKVILTESAP 145 (275)
T ss_pred CEEEEECCcHHH----HHHHHHHHHcCCceEEEEecCCC
Confidence 379999976432 34444434344458899887554
No 336
>PRK14489 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional
Probab=21.11 E-value=80 Score=28.37 Aligned_cols=42 Identities=7% Similarity=0.191 Sum_probs=32.7
Q ss_pred CCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCC
Q psy16575 25 KRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLA 67 (247)
Q Consensus 25 ~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~ 67 (247)
++.+|-|=|+.+++.+.+...+.+ .|.+.||+|.++-...+.
T Consensus 204 ~~~~~~~~g~~~~GKtt~~~~l~~-~l~~~g~~v~~iKh~~h~ 245 (366)
T PRK14489 204 APPLLGVVGYSGTGKTTLLEKLIP-ELIARGYRIGLIKHSHHR 245 (366)
T ss_pred CccEEEEecCCCCCHHHHHHHHHH-HHHHcCCEEEEEEECCcc
Confidence 466999999999988777788886 566668999988766554
No 337
>PF08357 SEFIR: SEFIR domain; InterPro: IPR013568 This domain is found in IL17 receptors (IL17Rs, e.g. Q60943 from SWISSPROT) and SEF proteins (e.g. Q8QHJ9 from SWISSPROT). The latter are feedback inhibitors of FGF signalling and are also thought to be receptors. Due to its similarity to the TIR domain (IPR000157 from INTERPRO), the SEFIR region is thought to be involved in homotypic interactions with other SEFIR/TIR-domain-containing proteins. Thus, SEFs and IL17Rs may be involved in TOLL/IL1R-like signalling pathways [].
Probab=21.10 E-value=72 Score=24.28 Aligned_cols=34 Identities=18% Similarity=0.398 Sum_probs=24.5
Q ss_pred CeEEEEeCCCCCCCCChHHHHHHHHHhcC-CcEEEE
Q psy16575 26 RNVIIIHGFNQSESQSPMTIIRDAYIRRR-DYNVFM 60 (247)
Q Consensus 26 ~~vv~iHG~~~~~~~~~~~~l~~~~l~~~-~~~Vi~ 60 (247)
|.|++++-+-+.....+...++. +|++. |++|++
T Consensus 1 ~kVfI~Ys~d~~~h~~~V~~la~-~L~~~~g~~V~l 35 (150)
T PF08357_consen 1 RKVFISYSHDSEEHKEWVLALAE-FLRQNCGIDVIL 35 (150)
T ss_pred CeEEEEeCCCCHHHHHHHHHHHH-HHHhccCCceee
Confidence 46888888755444456778886 77776 899984
No 338
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=20.97 E-value=1.8e+02 Score=22.96 Aligned_cols=41 Identities=17% Similarity=0.296 Sum_probs=33.1
Q ss_pred CeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCCC
Q psy16575 26 RNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADLA 67 (247)
Q Consensus 26 ~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~~ 67 (247)
+.||=|=||.+++.......+.+ .|.+.||.|.++-...+.
T Consensus 2 ~~Il~ivG~k~SGKTTLie~lv~-~L~~~G~rVa~iKH~hh~ 42 (161)
T COG1763 2 MKILGIVGYKNSGKTTLIEKLVR-KLKARGYRVATVKHAHHD 42 (161)
T ss_pred CcEEEEEecCCCChhhHHHHHHH-HHHhCCcEEEEEEecCCC
Confidence 46888999999998878888887 566678999999766654
No 339
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=20.82 E-value=1.2e+02 Score=23.82 Aligned_cols=37 Identities=24% Similarity=0.236 Sum_probs=23.9
Q ss_pred hcHHHHHHHHHHHHHHHH-Hc--CCCCccEEEEEechhhH
Q psy16575 77 SNTRLVAQCAAQFYSHLT-HH--GASAYDIHCVGHSLGAH 113 (247)
Q Consensus 77 ~~~~~v~~~l~~~i~~l~-~~--~~~~~~i~liGhSlGg~ 113 (247)
.+...++..+..+-+.+. .. ...+++|.|+|-||+..
T Consensus 77 ~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 77 YSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 456677777766666654 22 44679999999999987
No 340
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=20.57 E-value=94 Score=22.29 Aligned_cols=32 Identities=28% Similarity=0.328 Sum_probs=22.1
Q ss_pred EEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcC
Q psy16575 28 VIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDF 63 (247)
Q Consensus 28 vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~ 63 (247)
+|+|-|-.+++.+.....|++ +.|+.++..|-
T Consensus 1 vI~I~G~~gsGKST~a~~La~----~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKSTLAKELAE----RLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHHHHHHHHHH----HHTCEEEEEHH
T ss_pred CEEEECCCCCCHHHHHHHHHH----HHCCeEEEecc
Confidence 689999999986534444443 33788888885
No 341
>PF13191 AAA_16: AAA ATPase domain; PDB: 2V1U_A.
Probab=20.54 E-value=78 Score=24.49 Aligned_cols=44 Identities=18% Similarity=0.278 Sum_probs=24.6
Q ss_pred CCCCCeEEEEeCCCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCC
Q psy16575 22 DPHKRNVIIIHGFNQSESQSPMTIIRDAYIRRRDYNVFMLDFADL 66 (247)
Q Consensus 22 ~~~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~~~~Vi~vD~~~~ 66 (247)
....+.+++|||-.|.+.+.....+...+.....+ ++.+++...
T Consensus 20 ~~~~~~~~ll~G~~G~GKT~ll~~~~~~~~~~~~~-~~~~~~~~~ 63 (185)
T PF13191_consen 20 QSGSPRNLLLTGESGSGKTSLLRALLDRLAERGGY-VISINCDDS 63 (185)
T ss_dssp SS-----EEE-B-TTSSHHHHHHHHHHHHHHHT---EEEEEEETT
T ss_pred HcCCCcEEEEECCCCCCHHHHHHHHHHHHHhcCCE-EEEEEEecc
Confidence 45567899999999998765666666655555445 777777655
No 342
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=20.52 E-value=3e+02 Score=19.02 Aligned_cols=40 Identities=10% Similarity=0.193 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHcC--CCCccEEEEEechhhHHHhhhhhhcc
Q psy16575 84 QCAAQFYSHLTHHG--ASAYDIHCVGHSLGAHICGMMSNHLT 123 (247)
Q Consensus 84 ~~l~~~i~~l~~~~--~~~~~i~liGhSlGg~va~~~a~~~~ 123 (247)
+.+.+.++.....+ -.++++-+||-|-|=.+|..++..+.
T Consensus 21 ~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 21 RNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp HHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhc
Confidence 44555555544321 23589999999999999877776664
No 343
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=20.27 E-value=1.6e+02 Score=24.05 Aligned_cols=89 Identities=12% Similarity=0.048 Sum_probs=43.1
Q ss_pred CCCeEEEEeCCCCCCCCChHHHHHHHHHhcC-CcEEEEEcCCCCCC--------CCChHHHhhcHHHHHHHHHH--HHHH
Q psy16575 24 HKRNVIIIHGFNQSESQSPMTIIRDAYIRRR-DYNVFMLDFADLAP--------FPCYLSSLSNTRLVAQCAAQ--FYSH 92 (247)
Q Consensus 24 ~~~~vv~iHG~~~~~~~~~~~~l~~~~l~~~-~~~Vi~vD~~~~~~--------~~~y~~~~~~~~~v~~~l~~--~i~~ 92 (247)
..+.|+||.=-.... .++...+.+ .+++. |+.+..++-..... ..-|... .++....+.+.+ +.+.
T Consensus 30 ~~~~i~~IptAs~~~-~~~~~~~~~-a~~~l~G~~~~~~~~~~~~~~~~~l~~ad~I~l~G-G~~~~~~~~l~~~~l~~~ 106 (212)
T cd03146 30 ARPKVLFVPTASGDR-DEYTARFYA-AFESLRGVEVSHLHLFDTEDPLDALLEADVIYVGG-GNTFNLLAQWREHGLDAI 106 (212)
T ss_pred CCCeEEEECCCCCCH-HHHHHHHHH-HHhhccCcEEEEEeccCcccHHHHHhcCCEEEECC-chHHHHHHHHHHcCHHHH
Confidence 456788877544322 234445554 45556 78888876332000 0001111 122222222222 1122
Q ss_pred HHHcCCCCccEEEEEechhhHHHhh
Q psy16575 93 LTHHGASAYDIHCVGHSLGAHICGM 117 (247)
Q Consensus 93 l~~~~~~~~~i~liGhSlGg~va~~ 117 (247)
|++. + .+...++|-|+|+++.+.
T Consensus 107 l~~~-~-~~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 107 LKAA-L-ERGVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHHH-H-HCCCEEEEECHhHHhhCC
Confidence 2221 1 145789999999998865
No 344
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=20.26 E-value=3.4e+02 Score=19.49 Aligned_cols=25 Identities=16% Similarity=0.287 Sum_probs=15.5
Q ss_pred eEEEEeCCCCCCCCChHHHHHHHHHhc
Q psy16575 27 NVIIIHGFNQSESQSPMTIIRDAYIRR 53 (247)
Q Consensus 27 ~vv~iHG~~~~~~~~~~~~l~~~~l~~ 53 (247)
++++-||-.... ...+..+.. .+++
T Consensus 3 illvgHGSr~~~-~~~~~~l~~-~l~~ 27 (103)
T cd03413 3 VVFMGHGTDHPS-NAVYAALEY-VLRE 27 (103)
T ss_pred EEEEECCCCchh-hhHHHHHHH-HHHh
Confidence 566679966654 346677776 4443
Done!