BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16577
(491 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6ZQX7|CQ097_HUMAN Uncharacterized protein C17orf97 OS=Homo sapiens GN=C17orf97 PE=2
SV=2
Length = 453
Score = 108 bits (270), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 79/198 (39%)
Query: 17 ASMGFRSDNAASVGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNP 76
A GF D A GF D A GF D A GF D A GF D A GF D
Sbjct: 201 ALKGFHPDPEALKGFHPDPDALKGFHPDPEALKGFHPDPEALKGFHPDPEALKGFHPDPE 260
Query: 77 ASMGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNPASMGFRSDNP 136
A G D A G D A GF D A GF D A GF +D A GF D
Sbjct: 261 ALKGIHPDPEALKGIHPDPEALKGFHPDPEALKGFHPDPEALKGFHTDPEALKGFHIDPE 320
Query: 137 ASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFRSDNPASVGFRSDNP 196
A GF D A GF D GF +D A F D A GF D A GF D
Sbjct: 321 ALKGFHPDPKALKGFHPDPKALKGFHTDPEALKGFHPDPKALKGFHPDPEALKGFHPDPE 380
Query: 197 ASVGFRSDNPASVGFRSD 214
A GF D A GF +D
Sbjct: 381 ALKGFHPDPEALKGFHTD 398
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 79/198 (39%)
Query: 7 ASVGFRSDKPASMGFRSDNAASVGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNA 66
A GF D A GF D A GF D A GF D A GF D A GF D
Sbjct: 201 ALKGFHPDPEALKGFHPDPDALKGFHPDPEALKGFHPDPEALKGFHPDPEALKGFHPDPE 260
Query: 67 ASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNP 126
A G D A G D A GF D A GF D A GF +D A GF D
Sbjct: 261 ALKGIHPDPEALKGIHPDPEALKGFHPDPEALKGFHPDPEALKGFHTDPEALKGFHIDPE 320
Query: 127 ASMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFRSDNP 186
A GF D A GF D A GF +D GF D A F D A GF D
Sbjct: 321 ALKGFHPDPKALKGFHPDPKALKGFHTDPEALKGFHPDPKALKGFHPDPEALKGFHPDPE 380
Query: 187 ASVGFRSDNPASVGFRSD 204
A GF D A GF +D
Sbjct: 381 ALKGFHPDPEALKGFHTD 398
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 79/198 (39%)
Query: 47 ASVGFRSDNAASVGFRSDNAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNA 106
A GF D A GF D A GF D A GF D A GF D A GF D
Sbjct: 201 ALKGFHPDPEALKGFHPDPDALKGFHPDPEALKGFHPDPEALKGFHPDPEALKGFHPDPE 260
Query: 107 ASVGFRSDNAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNP 166
A G D A G D A GF D A GF D A GF +D GF D
Sbjct: 261 ALKGIHPDPEALKGIHPDPEALKGFHPDPEALKGFHPDPEALKGFHTDPEALKGFHIDPE 320
Query: 167 AFVVFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNP 226
A F D A GF D A GF +D A GF D A GF D A GF D
Sbjct: 321 ALKGFHPDPKALKGFHPDPKALKGFHTDPEALKGFHPDPKALKGFHPDPEALKGFHPDPE 380
Query: 227 ASVGFRSDNPASVGFRSD 244
A GF D A GF +D
Sbjct: 381 ALKGFHPDPEALKGFHTD 398
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 79/198 (39%)
Query: 57 ASVGFRSDNAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNA 116
A GF D A GF D A GF D A GF D A GF D A GF D
Sbjct: 201 ALKGFHPDPEALKGFHPDPDALKGFHPDPEALKGFHPDPEALKGFHPDPEALKGFHPDPE 260
Query: 117 ASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNP 176
A G D A G D A GF D A GF D GF +D A F D
Sbjct: 261 ALKGIHPDPEALKGIHPDPEALKGFHPDPEALKGFHPDPEALKGFHTDPEALKGFHIDPE 320
Query: 177 ASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNP 236
A GF D A GF D A GF +D A GF D A GF D A GF D
Sbjct: 321 ALKGFHPDPKALKGFHPDPKALKGFHTDPEALKGFHPDPKALKGFHPDPEALKGFHPDPE 380
Query: 237 ASVGFRSDNPASVGFRSD 254
A GF D A GF +D
Sbjct: 381 ALKGFHPDPEALKGFHTD 398
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 76/191 (39%)
Query: 4 DNSASVGFRSDKPASMGFRSDNAASVGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRS 63
D A GF D A GF D A GF D A GF D A GF D A G
Sbjct: 208 DPEALKGFHPDPDALKGFHPDPEALKGFHPDPEALKGFHPDPEALKGFHPDPEALKGIHP 267
Query: 64 DNAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRS 123
D A G D A GF D A GF D A GF +D A GF D A GF
Sbjct: 268 DPEALKGIHPDPEALKGFHPDPEALKGFHPDPEALKGFHTDPEALKGFHIDPEALKGFHP 327
Query: 124 DNPASMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFRS 183
D A GF D A GF +D A GF D GF D A F D A GF
Sbjct: 328 DPKALKGFHPDPKALKGFHTDPEALKGFHPDPKALKGFHPDPEALKGFHPDPEALKGFHP 387
Query: 184 DNPASVGFRSD 194
D A GF +D
Sbjct: 388 DPEALKGFHTD 398
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 79/202 (39%)
Query: 87 ASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNPASMGFRSDNPASIGFRSDNP 146
A GF D A GF D A GF D A GF D A GF D A GF D
Sbjct: 201 ALKGFHPDPEALKGFHPDPDALKGFHPDPEALKGFHPDPEALKGFHPDPEALKGFHPDPE 260
Query: 147 ASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNP 206
A G D G D A F D A GF D A GF +D A GF D
Sbjct: 261 ALKGIHPDPEALKGIHPDPEALKGFHPDPEALKGFHPDPEALKGFHTDPEALKGFHIDPE 320
Query: 207 ASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPTSVGFRSDNI 266
A GF D A GF D A GF +D A GF D A GF D GF D
Sbjct: 321 ALKGFHPDPKALKGFHPDPKALKGFHTDPEALKGFHPDPKALKGFHPDPEALKGFHPDPE 380
Query: 267 SSVGFKSDNAVSVGFKSDNAAE 288
+ GF D GF +D AE
Sbjct: 381 ALKGFHPDPEALKGFHTDPNAE 402
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 78/198 (39%)
Query: 67 ASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNP 126
A GF D A GF D A GF D A GF D A GF D A GF D
Sbjct: 201 ALKGFHPDPEALKGFHPDPDALKGFHPDPEALKGFHPDPEALKGFHPDPEALKGFHPDPE 260
Query: 127 ASMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFRSDNP 186
A G D A G D A GF D GF D A F +D A GF D
Sbjct: 261 ALKGIHPDPEALKGIHPDPEALKGFHPDPEALKGFHPDPEALKGFHTDPEALKGFHIDPE 320
Query: 187 ASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNP 246
A GF D A GF D A GF +D A GF D A GF D A GF D
Sbjct: 321 ALKGFHPDPKALKGFHPDPKALKGFHTDPEALKGFHPDPKALKGFHPDPEALKGFHPDPE 380
Query: 247 ASVGFRSDNPTSVGFRSD 264
A GF D GF +D
Sbjct: 381 ALKGFHPDPEALKGFHTD 398
Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 78/198 (39%)
Query: 77 ASMGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNPASMGFRSDNP 136
A GF D A GF D A GF D A GF D A GF D A GF D
Sbjct: 201 ALKGFHPDPEALKGFHPDPDALKGFHPDPEALKGFHPDPEALKGFHPDPEALKGFHPDPE 260
Query: 137 ASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFRSDNPASVGFRSDNP 196
A G D A G D GF D A F D A GF +D A GF D
Sbjct: 261 ALKGIHPDPEALKGIHPDPEALKGFHPDPEALKGFHPDPEALKGFHTDPEALKGFHIDPE 320
Query: 197 ASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNP 256
A GF D A GF D A GF +D A GF D A GF D A GF D
Sbjct: 321 ALKGFHPDPKALKGFHPDPKALKGFHTDPEALKGFHPDPKALKGFHPDPEALKGFHPDPE 380
Query: 257 TSVGFRSDNISSVGFKSD 274
GF D + GF +D
Sbjct: 381 ALKGFHPDPEALKGFHTD 398
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 48/115 (41%), Gaps = 5/115 (4%)
Query: 3 SDNSASVGFRSDKPASMGFRSDNAASVGFRSDNPASIGFRSDNPASVGFRSDNAASVGFR 62
+D A GF D A GF D A GF D A GF +D A GF D A GF
Sbjct: 307 TDPEALKGFHIDPEALKGFHPDPKALKGFHPDPKALKGFHTDPEALKGFHPDPKALKGFH 366
Query: 63 SDNAASVGFRSDNPASMGFRSDNPASIGFRSDN-----PASVGFRSDNAASVGFR 112
D A GF D A GF D A GF +D P ++ + SD S R
Sbjct: 367 PDPEALKGFHPDPEALKGFHPDPEALKGFHTDPNAEEAPENLPYLSDKDGSSSHR 421
>sp|A4II09|EIF3A_XENTR Eukaryotic translation initiation factor 3 subunit A OS=Xenopus
tropicalis GN=eif3a PE=2 SV=1
Length = 1391
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 60/201 (29%)
Query: 10 GFRSDKPASMGFRSDNAASVGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASV 69
GF D+ G D A GF D GF D GF D G D
Sbjct: 1000 GFEEDRGPRRGIEDDRAPRRGFDDDRGPRRGFDDDRGPRRGFDEDRGPRRGIDDDRGPRR 1059
Query: 70 GFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNPASM 129
GF D GF D GF D GF D GF D GF D
Sbjct: 1060 GFDEDRTPRRGFDDDRGPRRGFDDDRGPRRGFDEDRGPRRGFEDDRGPRRGFEDDRGPRR 1119
Query: 130 GFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFRSDNPASV 189
GF D GF D GF D GF D F D GF D
Sbjct: 1120 GFEDDRGPRRGFEDDRGPRRGFEDDRGPRRGFDEDRGPRRGFEDDRGPRRGFDEDRTPRR 1179
Query: 190 GFRSDNPASVGFRSDNPASVG 210
GF D G D + G
Sbjct: 1180 GFDDDRGPRRGLDEDRGSWRG 1200
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 65/228 (28%), Gaps = 1/228 (0%)
Query: 13 SDKPASMGFRSDNAASVGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFR 72
D+ G D G P GF D G D A GF D GF
Sbjct: 974 EDRGPKRGLEEDRGPRRGIDDAGPRR-GFEEDRGPRRGIEDDRAPRRGFDDDRGPRRGFD 1032
Query: 73 SDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNPASMGFR 132
D GF D G D GF D GF D GF D GF
Sbjct: 1033 DDRGPRRGFDEDRGPRRGIDDDRGPRRGFDEDRTPRRGFDDDRGPRRGFDDDRGPRRGFD 1092
Query: 133 SDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFRSDNPASVGFR 192
D GF D GF D GF D F D GF D GF
Sbjct: 1093 EDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGPRRGFD 1152
Query: 193 SDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVG 240
D GF D GF D GF D G D + G
Sbjct: 1153 EDRGPRRGFEDDRGPRRGFDEDRTPRRGFDDDRGPRRGLDEDRGSWRG 1200
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 73/253 (28%), Gaps = 2/253 (0%)
Query: 50 GFRSDNAASVGFRSDNAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAASV 109
GF D G D A GF D GF D GF D G D
Sbjct: 1000 GFEEDRGPRRGIEDDRAPRRGFDDDRGPRRGFDDDRGPRRGFDEDRGPRRGIDDDRGPRR 1059
Query: 110 GFRSDNAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFV 169
GF D GF D GF D GF D GF D GF D
Sbjct: 1060 GFDEDRTPRRGFDDDRGPRRGFDDDRGPRRGFDEDRGPRRGFEDDRGPRRGFEDDRGPRR 1119
Query: 170 VFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASV 229
F D GF D GF D GF D GF D GF D
Sbjct: 1120 GFEDDRGPRRGFEDDRGPRRGFEDDRGPRRGFDEDRGPRRGFEDDRGPRRGFDEDRTPRR 1179
Query: 230 GFRSDNPASVGFRSDNPASVGFRSDNPTSVGFRSDNISSVGFKSDNAVSVGFKSDNAAEH 289
GF D G D + G D+ G D G D G D
Sbjct: 1180 GFDDDRGPRRGLDEDRGSWRG--GDDVPRRGADDDRGPRRGADDDRGPRRGEDRDQTPWK 1237
Query: 290 NHSARRSSGGEER 302
+A R G ER
Sbjct: 1238 PMAASRPGGWRER 1250
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 57/198 (28%)
Query: 3 SDNSASVGFRSDKPASMGFRSDNAASVGFRSDNPASIGFRSDNPASVGFRSDNAASVGFR 62
D G D+ GF D GF D GF D G D GF
Sbjct: 1003 EDRGPRRGIEDDRAPRRGFDDDRGPRRGFDDDRGPRRGFDEDRGPRRGIDDDRGPRRGFD 1062
Query: 63 SDNAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFR 122
D GF D GF D GF D GF D GF D GF
Sbjct: 1063 EDRTPRRGFDDDRGPRRGFDDDRGPRRGFDEDRGPRRGFEDDRGPRRGFEDDRGPRRGFE 1122
Query: 123 SDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFR 182
D GF D GF D GF D GF D F D GF
Sbjct: 1123 DDRGPRRGFEDDRGPRRGFEDDRGPRRGFDEDRGPRRGFEDDRGPRRGFDEDRTPRRGFD 1182
Query: 183 SDNPASVGFRSDNPASVG 200
D G D + G
Sbjct: 1183 DDRGPRRGLDEDRGSWRG 1200
>sp|Q12816|TROP_HUMAN Trophinin OS=Homo sapiens GN=TRO PE=1 SV=3
Length = 1431
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 104/298 (34%), Gaps = 19/298 (6%)
Query: 8 SVGFRSDKPASMGFRSDNAASVGFRSDNPASIGFRS--------DNPASVGFRSDNAASV 59
S+GF + S+ F + S+ F S+ F S P S A S
Sbjct: 1126 SIGFGAAPSTSVSFGGAHGTSLCFGGAPSTSLCFGSASNTNLCFGGPPSTSACFSGATSP 1185
Query: 60 GFRSDNAASVGFRSDNPASM--GFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAA 117
F + S GF N S GF S GF S GF + S GF
Sbjct: 1186 SFCDGPSTSTGFSFGNGLSTNAGFGGGLNTSAGFGGGLGTSAGFSGGLSTSSGFDGGLGT 1245
Query: 118 SVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPA 177
S GF S GF S GF S GF S GF F S
Sbjct: 1246 SAGFGGGPGTSTGFGGGLGTSAGFSGGLGTSAGFGGGLVTSDGFGGGLGTNASFGSTLGT 1305
Query: 178 SVGFRSDNPASVGFRSDNPAS--------VGFRSDNPASVGFRSDNPASVGFRSDNPASV 229
S GF S GF S AS +GF S + S GF + S GF S + V
Sbjct: 1306 SAGFSGGLSTSDGFGSRPNASFDRGLSTIIGFGSGSNTSTGFTGEPSTSTGFSSGPSSIV 1365
Query: 230 GFRSDNPASVGFRSDNPASVGFRSDNPTSVGFRSDNISSVGFKSDNAVSVGFKSDNAA 287
GF VGF S P++ GF T GF + GF + S GF S A+
Sbjct: 1366 GFSGGPSTGVGFCS-GPSTSGFSGGPSTGAGFGGGPNTGAGFGGGPSTSAGFGSGAAS 1422
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 99/284 (34%), Gaps = 12/284 (4%)
Query: 10 GFRSDKPASMGFRSDNAASVGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASV 69
GF S GF + + F SIGF + SV F + S+ F + S+
Sbjct: 1098 GFGGAFSTSAGFGGALSTAADFGGTPSNSIGFGAAPSTSVSFGGAHGTSLCFGGAPSTSL 1157
Query: 70 GFRSDNPASMGFRSDNPASIGFR-------SDNPA-SVGFRSDNAASV--GFRSDNAASV 119
F S + ++ F S F D P+ S GF N S GF S
Sbjct: 1158 CFGSASNTNLCFGGPPSTSACFSGATSPSFCDGPSTSTGFSFGNGLSTNAGFGGGLNTSA 1217
Query: 120 GFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASV 179
GF S GF S GF S GF S GF F S
Sbjct: 1218 GFGGGLGTSAGFSGGLSTSSGFDGGLGTSAGFGGGPGTSTGFGGGLGTSAGFSGGLGTSA 1277
Query: 180 GFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASV 239
GF S GF + F S S GF S GF S AS F +
Sbjct: 1278 GFGGGLVTSDGFGGGLGTNASFGSTLGTSAGFSGGLSTSDGFGSRPNAS--FDRGLSTII 1335
Query: 240 GFRSDNPASVGFRSDNPTSVGFRSDNISSVGFKSDNAVSVGFKS 283
GF S + S GF + TS GF S S VGF + VGF S
Sbjct: 1336 GFGSGSNTSTGFTGEPSTSTGFSSGPSSIVGFSGGPSTGVGFCS 1379
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 100/281 (35%), Gaps = 6/281 (2%)
Query: 20 GFRSDNAASVGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNPASM 79
GF + S GF + F S+GF + + SV F + S+ F S+
Sbjct: 1098 GFGGAFSTSAGFGGALSTAADFGGTPSNSIGFGAAPSTSVSFGGAHGTSLCFGGAPSTSL 1157
Query: 80 GFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNPASM--GFRSDNPA 137
F S + ++ F P S A S F + S GF N S GF
Sbjct: 1158 CFGSASNTNLCF--GGPPSTSACFSGATSPSFCDGPSTSTGFSFGNGLSTNAGFGGGLNT 1215
Query: 138 SIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFRSDNPASVGFRSDNPA 197
S GF S GF + S GF F S GF S GF
Sbjct: 1216 SAGFGGGLGTSAGFSGGLSTSSGFDGGLGTSAGFGGGPGTSTGFGGGLGTSAGFSGGLGT 1275
Query: 198 SVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPT 257
S GF S GF + F S S GF S GF S AS F T
Sbjct: 1276 SAGFGGGLVTSDGFGGGLGTNASFGSTLGTSAGFSGGLSTSDGFGSRPNAS--FDRGLST 1333
Query: 258 SVGFRSDNISSVGFKSDNAVSVGFKSDNAAEHNHSARRSSG 298
+GF S + +S GF + + S GF S ++ S S+G
Sbjct: 1334 IIGFGSGSNTSTGFTGEPSTSTGFSSGPSSIVGFSGGPSTG 1374
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 100/278 (35%), Gaps = 24/278 (8%)
Query: 21 FRSDNAASVGFRSDNPASIGFRS--DNPASVGFRSDNAASV-GFRSDNAASVGFRSDNPA 77
F + SV F S GF + AS G +AS G S +A G NP
Sbjct: 1039 FGGTLSTSVCFGGSPSTSAGFGGALNTNASFGCAVSTSASFSGAVSTSACFSGAPITNP- 1097
Query: 78 SMGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNPASMGFRSDNPA 137
GF S GF + F + S+GF + + SV F + S+ F
Sbjct: 1098 --GFGGAFSTSAGFGGALSTAADFGGTPSNSIGFGAAPSTSVSFGGAHGTSLCFGGAPST 1155
Query: 138 SIGFRSDNPASVGFRSDNAVSVGFR-SDNPAFVVFRSDNPA-SVGFRSDNPASV--GFRS 193
S+ F S + ++ F + S F + +P+F D P+ S GF N S GF
Sbjct: 1156 SLCFGSASNTNLCFGGPPSTSACFSGATSPSFC----DGPSTSTGFSFGNGLSTNAGFGG 1211
Query: 194 DNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRS 253
S GF S GF S GF S GF S GF S GF
Sbjct: 1212 GLNTSAGFGGGLGTSAGFSGGLSTSSGFDGGLGTSAGFGGGPGTSTGFGGGLGTSAGFSG 1271
Query: 254 DNPTSVGFRSDNISSVGFK----------SDNAVSVGF 281
TS GF ++S GF S S GF
Sbjct: 1272 GLGTSAGFGGGLVTSDGFGGGLGTNASFGSTLGTSAGF 1309
Score = 33.1 bits (74), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 3 SDNSASVGFRSDKPASMGFRSDNAASVGFRSDNPASIGFRSDNPASVGFRSDNAASVGFR 62
S ++ S GF + S GF S ++ VGF +GF S P++ GF + GF
Sbjct: 1339 SGSNTSTGFTGEPSTSTGFSSGPSSIVGFSGGPSTGVGFCS-GPSTSGFSGGPSTGAGFG 1397
Query: 63 SDNAASVGFRSDNPASMGFRSDNPASIG 90
GF S GF S AS+G
Sbjct: 1398 GGPNTGAGFGGGPSTSAGFGS-GAASLG 1424
Score = 32.3 bits (72), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 93/284 (32%), Gaps = 10/284 (3%)
Query: 8 SVGFRSDKPASMGFRSDNAASVGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAA 67
S GF S F + SV F S+ F S + G+ + + F +
Sbjct: 986 STGFGGAMSTSADFGGTLSTSVCFGGSPGTSVSFGSALNTNAGYGGAVSTNTDFGGTLST 1045
Query: 68 SVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNPA 127
SV F S GF + F S F + S F + GF
Sbjct: 1046 SVCFGGSPSTSAGFGGALNTNASFGCAVSTSASFSGAVSTSACFSGAPITNPGFGGAFST 1105
Query: 128 SMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFRSDNPA 187
S GF + F S+GF + + SV F + + F S+ F S +
Sbjct: 1106 SAGFGGALSTAADFGGTPSNSIGFGAAPSTSVSFGGAHGTSLCFGGAPSTSLCFGSASNT 1165
Query: 188 SVGFRSDNPASVGFR-------SDNPA-SVGFRSDNPASV--GFRSDNPASVGFRSDNPA 237
++ F S F D P+ S GF N S GF S GF
Sbjct: 1166 NLCFGGPPSTSACFSGATSPSFCDGPSTSTGFSFGNGLSTNAGFGGGLNTSAGFGGGLGT 1225
Query: 238 SVGFRSDNPASVGFRSDNPTSVGFRSDNISSVGFKSDNAVSVGF 281
S GF S GF TS GF +S GF S GF
Sbjct: 1226 SAGFSGGLSTSSGFDGGLGTSAGFGGGPGTSTGFGGGLGTSAGF 1269
>sp|A2VD00|EIF3A_XENLA Eukaryotic translation initiation factor 3 subunit A OS=Xenopus
laevis GN=eif3a PE=2 SV=1
Length = 1424
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 75/267 (28%), Gaps = 7/267 (2%)
Query: 40 GFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNPASMGFRSDNPASIGFRSDNPASV 99
GF + GF D G D G D G D G D
Sbjct: 982 GFNDEPGPRRGFEDDQGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRR 1041
Query: 100 GFRSDNAASVGFRSDNAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAVSV 159
G D G D G D GF D GF D F D
Sbjct: 1042 GLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGFDEDRGPRRGFDEDRGPRRDFDEDRGPRR 1101
Query: 160 GFRSDNPAFVVFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASV 219
GF D F D GF D GF D GF D GF D
Sbjct: 1102 GFDEDRGPRRGFDEDRGPRRGFDEDRGPRRGFDDDRGPRRGFDDDRGPRRGFEDDRGPRR 1161
Query: 220 GFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPTSVGFRSDNISSV-GFKSDNAVS 278
GF D GF D GF D GF D G + +S G + D
Sbjct: 1162 GFEDDRGPRRGFEDDRGPRRGFDEDRTPRRGFEDDRGPRRGMDEERVSWRGGAEEDRGPR 1221
Query: 279 VGFKSD----NAAEHNHSARRSSGGEE 301
G + D AE + RR G EE
Sbjct: 1222 RGAEEDRGPRRGAEEDRGPRR--GAEE 1246
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 59/229 (25%)
Query: 23 SDNAASVGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNPASMGFR 82
D GF + GF D G D G D G D G
Sbjct: 975 EDGGPRRGFNDEPGPRRGFEDDQGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLD 1034
Query: 83 SDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNPASMGFRSDNPASIGFR 142
D G D G D G D GF D GF D F
Sbjct: 1035 EDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGFDEDRGPRRGFDEDRGPRRDFD 1094
Query: 143 SDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFRSDNPASVGFRSDNPASVGFR 202
D GF D GF D F D GF D GF D GF
Sbjct: 1095 EDRGPRRGFDEDRGPRRGFDEDRGPRRGFDEDRGPRRGFDDDRGPRRGFDDDRGPRRGFE 1154
Query: 203 SDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGF 251
D GF D GF D GF D GF D G
Sbjct: 1155 DDRGPRRGFEDDRGPRRGFEDDRGPRRGFDEDRTPRRGFEDDRGPRRGM 1203
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 47/165 (28%)
Query: 1 MPSDNSASVGFRSDKPASMGFRSDNAASVGFRSDNPASIGFRSDNPASVGFRSDNAASVG 60
+ D G D+ G D G D GF D GF D
Sbjct: 1033 LDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGFDEDRGPRRGFDEDRGPRRD 1092
Query: 61 FRSDNAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVG 120
F D GF D GF D GF D GF D GF D G
Sbjct: 1093 FDEDRGPRRGFDEDRGPRRGFDEDRGPRRGFDEDRGPRRGFDDDRGPRRGFDDDRGPRRG 1152
Query: 121 FRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDN 165
F D GF D GF D GF D GF D
Sbjct: 1153 FEDDRGPRRGFEDDRGPRRGFEDDRGPRRGFDEDRTPRRGFEDDR 1197
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 53/201 (26%)
Query: 1 MPSDNSASVGFRSDKPASMGFRSDNAASVGFRSDNPASIGFRSDNPASVGFRSDNAASVG 60
+ D G D+ G D G D G D G D G
Sbjct: 1003 LDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRGLDEDRGPRRG 1062
Query: 61 FRSDNAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVG 120
D GF D GF D F D GF D GF D G
Sbjct: 1063 LDEDRGPRRGFDEDRGPRRGFDEDRGPRRDFDEDRGPRRGFDEDRGPRRGFDEDRGPRRG 1122
Query: 121 FRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVG 180
F D GF D GF D GF D GF D F D G
Sbjct: 1123 FDEDRGPRRGFDDDRGPRRGFDDDRGPRRGFEDDRGPRRGFEDDRGPRRGFEDDRGPRRG 1182
Query: 181 FRSDNPASVGFRSDNPASVGF 201
F D GF D G
Sbjct: 1183 FDEDRTPRRGFEDDRGPRRGM 1203
>sp|Q8ILR9|YPF17_PLAF7 Protein PF14_0175 OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0175
PE=4 SV=1
Length = 4662
Score = 51.2 bits (121), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 83/215 (38%), Gaps = 4/215 (1%)
Query: 78 SMGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNPASMGFRSDNPA 137
S N ++G N +VG N +VG N +VG N ++ N
Sbjct: 3930 STSLNQPNINNVGMNQPNINNVGMNQPNINNVGMNQPNINNVGMNQPNINNVSMNQPNIN 3989
Query: 138 SIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFRSDNPASVGFRSDNPA 197
++ N +V N + N F + P++ F + P++ F + +
Sbjct: 3990 NVNMNQPNINNVSMNQPNINNFSMNQSNTN--NFNMNKPSTSSFSMNQPSTNNFSMNKSS 4047
Query: 198 SVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNP--ASVGFRSDN 255
+ F + ++ F P++ F + P++ F ++ P++ F + P ++ N
Sbjct: 4048 TNNFSINQTSANNFSMHQPSTNNFSMNKPSTNNFSTNKPSTNNFSMNQPNINNISMNQPN 4107
Query: 256 PTSVGFRSDNISSVGFKSDNAVSVGFKSDNAAEHN 290
+V + N++ G N S F N+++ +
Sbjct: 4108 TNNVHMNNLNMNQSGMNHTNMTSPIFNQSNSSKQS 4142
Score = 47.8 bits (112), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/231 (18%), Positives = 83/231 (35%), Gaps = 4/231 (1%)
Query: 38 SIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNPASMGFRSDNPASIGFRSDNPA 97
S N +VG N +VG N +VG N ++G N ++ N
Sbjct: 3930 STSLNQPNINNVGMNQPNINNVGMNQPNINNVGMNQPNINNVGMNQPNINNVSMNQPNIN 3989
Query: 98 SVGFRSDNAASVGFRSDNAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAV 157
+V N +V N + N + F + P++ F + P++ F + +
Sbjct: 3990 NVNMNQPNINNVSMNQPNINNFSMNQSN--TNNFNMNKPSTSSFSMNQPSTNNFSMNKSS 4047
Query: 158 SVGFRSDNPAFVVFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNP--ASVGFRSDN 215
+ F + + F P++ F + P++ F ++ P++ F + P ++ N
Sbjct: 4048 TNNFSINQTSANNFSMHQPSTNNFSMNKPSTNNFSTNKPSTNNFSMNQPNINNISMNQPN 4107
Query: 216 PASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPTSVGFRSDNI 266
+V + N G N S F N + + + + NI
Sbjct: 4108 TNNVHMNNLNMNQSGMNHTNMTSPIFNQSNSSKQSVNENAFVPPAYHTSNI 4158
Score = 41.2 bits (95), Expect = 0.017, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 74/199 (37%), Gaps = 4/199 (2%)
Query: 1 MPSDNSASVGFRSDKPASMGFRSDNAASVGFRSDNPASIGFRSDNPASVGFRSDNAASVG 60
M N +VG ++G N +VG N ++ N +V N +V
Sbjct: 3943 MNQPNINNVGMNQPNINNVGMNQPNINNVGMNQPNINNVSMNQPNINNVNMNQPNINNVS 4002
Query: 61 FRSDNAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVG 120
N + N + F + P++ F + P++ F + +++ F + ++
Sbjct: 4003 MNQPNINNFSMNQSN--TNNFNMNKPSTSSFSMNQPSTNNFSMNKSSTNNFSINQTSANN 4060
Query: 121 FRSDNPASMGFRSDNPASIGFRSDNPASVGFRSD--NAVSVGFRSDNPAFVVFRSDNPAS 178
F P++ F + P++ F ++ P++ F + N ++ N V + N
Sbjct: 4061 FSMHQPSTNNFSMNKPSTNNFSTNKPSTNNFSMNQPNINNISMNQPNTNNVHMNNLNMNQ 4120
Query: 179 VGFRSDNPASVGFRSDNPA 197
G N S F N +
Sbjct: 4121 SGMNHTNMTSPIFNQSNSS 4139
Score = 32.7 bits (73), Expect = 6.8, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 60/165 (36%), Gaps = 2/165 (1%)
Query: 128 SMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFRSDNPA 187
S N ++G N +VG N +VG N V N +V N
Sbjct: 3930 STSLNQPNINNVGMNQPNINNVGMNQPNINNVGMNQPNINNVGMNQPNINNVSMNQPNIN 3989
Query: 188 SVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPA 247
+V N +V + P F + + F + P++ F + P++ F + +
Sbjct: 3990 NVNMNQPNINNVSM--NQPNINNFSMNQSNTNNFNMNKPSTSSFSMNQPSTNNFSMNKSS 4047
Query: 248 SVGFRSDNPTSVGFRSDNISSVGFKSDNAVSVGFKSDNAAEHNHS 292
+ F + ++ F S+ F + + F ++ + +N S
Sbjct: 4048 TNNFSINQTSANNFSMHQPSTNNFSMNKPSTNNFSTNKPSTNNFS 4092
>sp|Q966L9|GLH2_CAEEL ATP-dependent RNA helicase glh-2 OS=Caenorhabditis elegans GN=glh-2
PE=1 SV=1
Length = 974
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 45/112 (40%), Gaps = 2/112 (1%)
Query: 51 FRSDNAASVGFRSDNAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAASVG 110
F + NA GF S NA GF S N GF S N GF S N GF NA G
Sbjct: 68 FGNGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGGGNAGGTG 127
Query: 111 FRSDNAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDN--AVSVG 160
F S NA G S N GF S N GF S N GF S G
Sbjct: 128 FGSGNAGGTGLGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGKAGGTGFG 179
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 43/113 (38%)
Query: 151 FRSDNAVSVGFRSDNPAFVVFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVG 210
F + NA GF S N F S N GF S N GF S N GF N G
Sbjct: 68 FGNGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGGGNAGGTG 127
Query: 211 FRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPTSVGFRS 263
F S N G S N GF S N GF S N GF S GF S
Sbjct: 128 FGSGNAGGTGLGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGKAGGTGFGS 180
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 54/169 (31%), Gaps = 41/169 (24%)
Query: 26 AASVGF---------------------------------------RSDNPASIG--FRSD 44
A ++ F ++G F +
Sbjct: 12 AKTISFGSNPSGFGGGSGFGSGNTGGFGSGNAGGTGFGSSNNGGSGFGGNNNVGPRFGNG 71
Query: 45 NPASVGFRSDNAASVGFRSDNAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSD 104
N GF S NA GF S NA GF S N GF S N GF N GF S
Sbjct: 72 NAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGGGNAGGTGFGSG 131
Query: 105 NAASVGFRSDNAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRS 153
NA G S NA GF S N GF S N GF S GF S
Sbjct: 132 NAGGTGLGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGKAGGTGFGS 180
Score = 35.8 bits (81), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 59/169 (34%), Gaps = 11/169 (6%)
Query: 66 AASVGF---------RSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAASVG--FRSD 114
A ++ F S + + + G + + G +VG F +
Sbjct: 12 AKTISFGSNPSGFGGGSGFGSGNTGGFGSGNAGGTGFGSSNNGGSGFGGNNNVGPRFGNG 71
Query: 115 NAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSD 174
NA GF S N GF S N GF S N GF S NA GF N F S
Sbjct: 72 NAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGGGNAGGTGFGSG 131
Query: 175 NPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRS 223
N G S N GF S N GF S N GF S GF S
Sbjct: 132 NAGGTGLGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGKAGGTGFGS 180
>sp|Q9H2D6|TARA_HUMAN TRIO and F-actin-binding protein OS=Homo sapiens GN=TRIOBP PE=1
SV=3
Length = 2365
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 119/301 (39%), Gaps = 49/301 (16%)
Query: 24 DNAASVGFRSDNP-ASIGFRS--DNPASVGFRSDNAASVGFRSDNAASVGFRSDNPASMG 80
DN + + DNP AS R+ DNP + + DN + S N A+ DNP +
Sbjct: 573 DNPRTSCAQRDNPRASSPNRATRDNPTTSCAQRDNPRASRTSSPNRAT----RDNPRTSC 628
Query: 81 FRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRS---DNPASMGFRSDNP- 136
+ DNP R+ +P + S R D AS R+ +NP + DNP
Sbjct: 629 AQRDNP-----RASSPNRTTQQDSPRTSCARRDDPRASSPNRTIQQENPRTSCALRDNPR 683
Query: 137 ---ASIGFRSDNP-ASVGFRSDNAVSVGFRS---DNPAFVVFRSDNPASVG----FRSDN 185
S + +NP S R D S R+ +NP R DNP + + DN
Sbjct: 684 ASSPSRTIQQENPRTSCAQRDDPRASSPNRTTQQENPRTSCARRDNPRASSRNRTIQRDN 743
Query: 186 PASVGFRSDNPA--------------SVGFRSDNPASVG---FRSDNPASVGFRSDN-PA 227
P + + DNP + R DNP + DNP + + DN A
Sbjct: 744 PRTSCAQRDNPRASSPNRTIQQENLRTSCTRQDNPRTSSPNRATRDNPRTSCAQRDNLRA 803
Query: 228 SVGFRS---DNPASVGFRSDNPASVGFRSDNPTSVGFRSDNISSVGFKSDNAVSVGFKSD 284
S R+ DNP + + + P S + DNP + + DN+ + D S F+ D
Sbjct: 804 SSPIRATQQDNPRTC-IQQNIPRSSSTQQDNPKTSCTKRDNLRPTCTQRDRTQSFSFQRD 862
Query: 285 N 285
N
Sbjct: 863 N 863
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 111/280 (39%), Gaps = 38/280 (13%)
Query: 4 DNSASVGFRSDKPASMGFRSDNAASVGFRSDNPASIGFRSDNP-ASVGFRSDNA----AS 58
DN + + D P + S N A+ DNP + + DNP AS R+ S
Sbjct: 596 DNPTTSCAQRDNPRASRTSSPNRAT----RDNPRTSCAQRDNPRASSPNRTTQQDSPRTS 651
Query: 59 VGFRSDNAASVGFRS---DNPASMGFRSDNP----ASIGFRSDNP-ASVGFRSDNAASVG 110
R D AS R+ +NP + DNP S + +NP S R D AS
Sbjct: 652 CARRDDPRASSPNRTIQQENPRTSCALRDNPRASSPSRTIQQENPRTSCAQRDDPRASSP 711
Query: 111 FRS---DNAASVGFRSDNPAS----MGFRSDNPASIGFRSDNPASVG----FRSDNAVSV 159
R+ +N + R DNP + + DNP + + DNP + + +N +
Sbjct: 712 NRTTQQENPRTSCARRDNPRASSRNRTIQRDNPRTSCAQRDNPRASSPNRTIQQENLRTS 771
Query: 160 GFRSDNPAFVV---FRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNP 216
R DNP DNP + + DN R+ +P + DNP + + + P
Sbjct: 772 CTRQDNPRTSSPNRATRDNPRTSCAQRDN-----LRASSPIRA-TQQDNPRTC-IQQNIP 824
Query: 217 ASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNP 256
S + DNP + + DN + D S F+ DNP
Sbjct: 825 RSSSTQQDNPKTSCTKRDNLRPTCTQRDRTQSFSFQRDNP 864
Score = 36.6 bits (83), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 86/213 (40%), Gaps = 31/213 (14%)
Query: 27 ASVGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRS---DNPASMGFRS 83
S R DNP R+ +P+ + + S R D AS R+ +NP + R
Sbjct: 674 TSCALR-DNP-----RASSPSRTIQQENPRTSCAQRDDPRASSPNRTTQQENPRTSCARR 727
Query: 84 DNPASIG----FRSDNPASVGFRSDNAASVG----FRSDNAASVGFRSDNPASMGFRSDN 135
DNP + + DNP + + DN + + +N + R DNP R+ +
Sbjct: 728 DNPRASSRNRTIQRDNPRTSCAQRDNPRASSPNRTIQQENLRTSCTRQDNP-----RTSS 782
Query: 136 PASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFRSDNPASVGFRSDN 195
P DNP + + DN R+ +P + DNP + + + P S + DN
Sbjct: 783 PNRAT--RDNPRTSCAQRDN-----LRASSP-IRATQQDNPRTC-IQQNIPRSSSTQQDN 833
Query: 196 PASVGFRSDNPASVGFRSDNPASVGFRSDNPAS 228
P + + DN + D S F+ DNP +
Sbjct: 834 PKTSCTKRDNLRPTCTQRDRTQSFSFQRDNPGT 866
>sp|P78332|RBM6_HUMAN RNA-binding protein 6 OS=Homo sapiens GN=RBM6 PE=1 SV=5
Length = 1123
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 62/142 (43%)
Query: 21 FRSDNAASVGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNPASMG 80
FR + +S F+S + + + FR + S FR + +R + S+ +R M
Sbjct: 95 FRGGDFSSSDFQSRDSSQLDFRGRDIHSGDFRDREGPPMDYRGGDGTSMDYRGREAPHMN 154
Query: 81 FRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNPASMGFRSDNPASIG 140
+R + ++ FR + FR + FR + + FR + + + FR+ +
Sbjct: 155 YRDRDAHAVDFRGRDAPPSDFRGRGTYDLDFRGRDGSHADFRGRDLSDLDFRAREQSRSD 214
Query: 141 FRSDNPASVGFRSDNAVSVGFR 162
FR+ + + + FR + V FR
Sbjct: 215 FRNRDVSDLDFRDKDGTQVDFR 236
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%)
Query: 51 FRSDNAASVGFRSDNAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAASVG 110
FR + +S F+S +++ + FR + S FR + +R + S+ +R A +
Sbjct: 95 FRGGDFSSSDFQSRDSSQLDFRGRDIHSGDFRDREGPPMDYRGGDGTSMDYRGREAPHMN 154
Query: 111 FRSDNAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVV 170
+R +A +V FR + FR + FR + + FR + + FR+ +
Sbjct: 155 YRDRDAHAVDFRGRDAPPSDFRGRGTYDLDFRGRDGSHADFRGRDLSDLDFRAREQSRSD 214
Query: 171 FRSDNPASVGFRSDNPASVGFR 192
FR+ + + + FR + V FR
Sbjct: 215 FRNRDVSDLDFRDKDGTQVDFR 236
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 64/152 (42%)
Query: 61 FRSDNAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVG 120
+R FR + +S F+S + + + FR + S FR + +R + S+
Sbjct: 85 YRGGEGPGHDFRGGDFSSSDFQSRDSSQLDFRGRDIHSGDFRDREGPPMDYRGGDGTSMD 144
Query: 121 FRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVG 180
+R M +R + ++ FR + FR + FR + + FR + + +
Sbjct: 145 YRGREAPHMNYRDRDAHAVDFRGRDAPPSDFRGRGTYDLDFRGRDGSHADFRGRDLSDLD 204
Query: 181 FRSDNPASVGFRSDNPASVGFRSDNPASVGFR 212
FR+ + FR+ + + + FR + V FR
Sbjct: 205 FRAREQSRSDFRNRDVSDLDFRDKDGTQVDFR 236
>sp|Q9NZT2|OGFR_HUMAN Opioid growth factor receptor OS=Homo sapiens GN=OGFR PE=1 SV=3
Length = 677
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 55/176 (31%), Gaps = 1/176 (0%)
Query: 95 NPASVGFRSDNAASVGFRSDNAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSD 154
+PA G + G D G + P S + P+ G D PA +
Sbjct: 484 SPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPS-ETPGPSPAGPAGDEPAESPSETP 542
Query: 155 NAVSVGFRSDNPAFVVFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSD 214
G D PA + P G D PA + P+ G D PA +
Sbjct: 543 GPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSETP 602
Query: 215 NPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPTSVGFRSDNISSVG 270
P G D PA + P G D PA + P+ G D + G
Sbjct: 603 GPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAG 658
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 49/164 (29%), Gaps = 1/164 (0%)
Query: 130 GFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFRSDNPASV 189
G D G + P S + G D PA + P G D PA
Sbjct: 499 GVEEDTEGRTGPKEGTPGSPS-ETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAES 557
Query: 190 GFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASV 249
+ P G D PA + P+ G D PA + P G D PA
Sbjct: 558 PSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAES 617
Query: 250 GFRSDNPTSVGFRSDNISSVGFKSDNAVSVGFKSDNAAEHNHSA 293
+ P G D + ++ G D A+ +A
Sbjct: 618 PSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAA 661
Score = 33.1 bits (74), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 40/135 (29%)
Query: 16 PASMGFRSDNAASVGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDN 75
P+ G D A + P G D PA + G D A +
Sbjct: 524 PSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG 583
Query: 76 PASMGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNPASMGFRSDN 135
P+ G D PA + P G D A + G D PA +
Sbjct: 584 PSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPG 643
Query: 136 PASIGFRSDNPASVG 150
P+ G D PA G
Sbjct: 644 PSPAGPTRDEPAKAG 658
>sp|Q6DRC5|USPL1_DANRE SUMO-specific isopeptidase USPL1 OS=Danio rerio GN=uspl1 PE=1 SV=1
Length = 1014
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/198 (18%), Positives = 67/198 (33%), Gaps = 18/198 (9%)
Query: 128 SMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFRSDNPA 187
S+ + P SI + P S +S+ + P ++ + P + P
Sbjct: 150 SLDKTEEQPVSIEDIKEQPISHDATEGQPISIDQTEEQPVSILHTEEQPIVLDLIEVKPM 209
Query: 188 SVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPA 247
SV + P + + P S+ + + P S+ + P S + P
Sbjct: 210 SVDHSEEQPICIDNTKERPVSIVHTEEQSIVLDLFEVKPMSIAHTEEKPTSFDHIEEKPM 269
Query: 248 SVGFRSDNPTSVGFRSDNISSVGFKSDNAVSVGFKSDNAAEHNHSARRSSGGEERLEKFK 307
S+ + P S+ D S+ + +S+ EE+ +
Sbjct: 270 SIAHTEEKPVSLVHTEDQHLSIDQTEEQPISID-----------------PTEEQQPEEL 312
Query: 308 IAVQDAGFNDITKRQEDC 325
AV D D+ +R+EDC
Sbjct: 313 PAVSDEDV-DLCERKEDC 329
Score = 40.4 bits (93), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/136 (18%), Positives = 46/136 (33%)
Query: 124 DNPASMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFRS 183
+ P S+ + P S P S+ + VS+ + P + P SV
Sbjct: 156 EQPVSIEDIKEQPISHDATEGQPISIDQTEEQPVSILHTEEQPIVLDLIEVKPMSVDHSE 215
Query: 184 DNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRS 243
+ P + + P S+ + + P S+ + P S + P S+
Sbjct: 216 EQPICIDNTKERPVSIVHTEEQSIVLDLFEVKPMSIAHTEEKPTSFDHIEEKPMSIAHTE 275
Query: 244 DNPASVGFRSDNPTSV 259
+ P S+ D S+
Sbjct: 276 EKPVSLVHTEDQHLSI 291
Score = 40.0 bits (92), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/136 (17%), Positives = 45/136 (33%)
Query: 124 DNPASMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFRS 183
+ P S P SI + P S+ + + + P V + P +
Sbjct: 166 EQPISHDATEGQPISIDQTEEQPVSILHTEEQPIVLDLIEVKPMSVDHSEEQPICIDNTK 225
Query: 184 DNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRS 243
+ P S+ + + P S+ + P S + P S+ + P S+
Sbjct: 226 ERPVSIVHTEEQSIVLDLFEVKPMSIAHTEEKPTSFDHIEEKPMSIAHTEEKPVSLVHTE 285
Query: 244 DNPASVGFRSDNPTSV 259
D S+ + P S+
Sbjct: 286 DQHLSIDQTEEQPISI 301
Score = 39.7 bits (91), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/122 (17%), Positives = 42/122 (34%)
Query: 118 SVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPA 177
S+ + P S+ + P + P SV + + + + P +V +
Sbjct: 180 SIDQTEEQPVSILHTEEQPIVLDLIEVKPMSVDHSEEQPICIDNTKERPVSIVHTEEQSI 239
Query: 178 SVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPA 237
+ P S+ + P S + P S+ + P S+ D S+ + P
Sbjct: 240 VLDLFEVKPMSIAHTEEKPTSFDHIEEKPMSIAHTEEKPVSLVHTEDQHLSIDQTEEQPI 299
Query: 238 SV 239
S+
Sbjct: 300 SI 301
Score = 39.7 bits (91), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/152 (17%), Positives = 50/152 (32%)
Query: 78 SMGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNPASMGFRSDNPA 137
S+ + P SI + P S S+ + S+ + P + P
Sbjct: 150 SLDKTEEQPVSIEDIKEQPISHDATEGQPISIDQTEEQPVSILHTEEQPIVLDLIEVKPM 209
Query: 138 SIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFRSDNPASVGFRSDNPA 197
S+ + P + + VS+ + + P S+ + P S + P
Sbjct: 210 SVDHSEEQPICIDNTKERPVSIVHTEEQSIVLDLFEVKPMSIAHTEEKPTSFDHIEEKPM 269
Query: 198 SVGFRSDNPASVGFRSDNPASVGFRSDNPASV 229
S+ + P S+ D S+ + P S+
Sbjct: 270 SIAHTEEKPVSLVHTEDQHLSIDQTEEQPISI 301
Score = 39.3 bits (90), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/146 (16%), Positives = 49/146 (33%)
Query: 74 DNPASMGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNPASMGFRS 133
+ P S+ + P S P S+ + S+ + + P S+
Sbjct: 156 EQPVSIEDIKEQPISHDATEGQPISIDQTEEQPVSILHTEEQPIVLDLIEVKPMSVDHSE 215
Query: 134 DNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFRSDNPASVGFRS 193
+ P I + P S+ + ++ + P + + P S + P S+
Sbjct: 216 EQPICIDNTKERPVSIVHTEEQSIVLDLFEVKPMSIAHTEEKPTSFDHIEEKPMSIAHTE 275
Query: 194 DNPASVGFRSDNPASVGFRSDNPASV 219
+ P S+ D S+ + P S+
Sbjct: 276 EKPVSLVHTEDQHLSIDQTEEQPISI 301
Score = 36.2 bits (82), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/174 (16%), Positives = 56/174 (32%), Gaps = 5/174 (2%)
Query: 1 MPSDNSASVGFRSDKPA-----SMGFRSDNAASVGFRSDNPASIGFRSDNPASVGFRSDN 55
+P D + F + A S+ + S+ + P S P S+ +
Sbjct: 128 LPDDTVKTQTFTDQQSAPAETISLDKTEEQPVSIEDIKEQPISHDATEGQPISIDQTEEQ 187
Query: 56 AASVGFRSDNAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDN 115
S+ + + P S+ + P I + P S+ + + +
Sbjct: 188 PVSILHTEEQPIVLDLIEVKPMSVDHSEEQPICIDNTKERPVSIVHTEEQSIVLDLFEVK 247
Query: 116 AASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFV 169
S+ + P S + P SI + P S+ D +S+ + P +
Sbjct: 248 PMSIAHTEEKPTSFDHIEEKPMSIAHTEEKPVSLVHTEDQHLSIDQTEEQPISI 301
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/122 (16%), Positives = 40/122 (32%)
Query: 68 SVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNPA 127
S+ + P S+ + P + P SV + + + S+ +
Sbjct: 180 SIDQTEEQPVSILHTEEQPIVLDLIEVKPMSVDHSEEQPICIDNTKERPVSIVHTEEQSI 239
Query: 128 SMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFRSDNPA 187
+ P SI + P S + +S+ + P +V D S+ + P
Sbjct: 240 VLDLFEVKPMSIAHTEEKPTSFDHIEEKPMSIAHTEEKPVSLVHTEDQHLSIDQTEEQPI 299
Query: 188 SV 189
S+
Sbjct: 300 SI 301
>sp|O60229|KALRN_HUMAN Kalirin OS=Homo sapiens GN=KALRN PE=1 SV=2
Length = 2985
Score = 39.7 bits (91), Expect = 0.056, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 12/152 (7%)
Query: 276 AVSVGFKSDNAAEHNHSARRSSGGE---ERLEKFKIAVQDAGFNDITKRQEDCRQLVKEY 332
VS + D +HNH A S R+ + +AG + ++ QL +E+
Sbjct: 341 GVSYQYALDLQTQHNHFAMNSMNAYVNINRIMSVASRLSEAGHYASQQIKQISTQLDQEW 400
Query: 333 YKSSVELDESMDQVTME---HSQAE-YNPRVD--CKLLVENKSSVECDE---SVEHNQSM 383
+ LDE + M H +AE + VD CK+ E E + ++ H+Q++
Sbjct: 401 KSFAAALDERSTILAMSAVFHQKAEQFLSGVDAWCKMCSEGGLPSEMQDLELAIHHHQTL 460
Query: 384 EHKTMEAHYEQSLDNRSPVDNYNQPVDGGNPE 415
+ +A+ E S D ++ +D +P+ GN E
Sbjct: 461 YEQVTQAYTEVSQDGKALLDVLQRPLSPGNSE 492
>sp|Q7D7A1|PPE40_MYCTU Uncharacterized PPE family protein PPE40 OS=Mycobacterium
tuberculosis GN=ppe40 PE=3 SV=1
Length = 615
Score = 39.3 bits (90), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 107/274 (39%), Gaps = 41/274 (14%)
Query: 15 KPASMGFRSDNAASVGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVGFRSD 74
P S F S N F S N S+ S N ++ + N V F N F
Sbjct: 267 NPGSGNFGSGN-----FGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGG 321
Query: 75 NPASM--GFRSDNPASIGF--RSDNPASVGFRSDNAASVGFRSDNAASVGFRSDNPASMG 130
N ++ GF + + GF +N +G D +G + ++GF + ++G
Sbjct: 322 NNGTLNFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIG 381
Query: 131 FRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFRSDNPASVG 190
F + +IGF + + GF + ++ GF + + N + GF S +VG
Sbjct: 382 FFNSGDGNIGFFNSGDGNTGFGNAGNINTGF---------WNAGN-LNTGFGSAGNGNVG 431
Query: 191 -FRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASV 249
F N S F VGF+ + GF + + GF + ++ GF + +
Sbjct: 432 IFDGGNSNSGSFN------VGFQ-----NTGFGNSGAGNTGFFNAGDSNTGFANAGNVNT 480
Query: 250 GFRSDNPTSVGFRSDNISSVGFKSDNAVSVGFKS 283
GF F +I++ GF N V+ GF S
Sbjct: 481 GF---------FNGGDINTGGFNGGN-VNTGFGS 504
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 105/249 (42%), Gaps = 31/249 (12%)
Query: 10 GFRSDKPASMGF--RSDNAASVGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAA 67
GF + + GF +N +G D IG + ++GF + ++GF +
Sbjct: 329 GFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDG 388
Query: 68 SVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAASVG-FRSDNAAS----VGFR 122
++GF + + GF + + GF + + GF S +VG F N+ S VGF+
Sbjct: 389 NIGFFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQ 448
Query: 123 SDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFRSDNPAFVVFRSDNPASVGFR 182
+ GF + + GF + ++ GF + V+ GF F + + GF
Sbjct: 449 -----NTGFGNSGAGNTGFFNAGDSNTGFANAGNVNTGF---------FNGGDINTGGFN 494
Query: 183 SDNPASVGFRS---DNPASVGFRSDNPASVGFRSDNPASVG----FRSDNPASVGFRSDN 235
N + GF S A+ GF + + G+ + +P+ G F + N S GF +
Sbjct: 495 GGN-VNTGFGSALTQAGANSGFGNLGTGNSGWGNSDPSGTGNSGFFNTGNGNS-GFSNAG 552
Query: 236 PASV-GFRS 243
PA + GF S
Sbjct: 553 PAMLPGFNS 561
>sp|P97924|KALRN_RAT Kalirin OS=Rattus norvegicus GN=Kalrn PE=1 SV=3
Length = 2959
Score = 38.9 bits (89), Expect = 0.089, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 12/152 (7%)
Query: 276 AVSVGFKSDNAAEHNHSARRSSGGE---ERLEKFKIAVQDAGFNDITKRQEDCRQLVKEY 332
VS D +HNH A S R+ + +AG + ++ QL +E+
Sbjct: 323 GVSYQHALDLQTQHNHFAMNSMNAYVNINRIMSVASRLSEAGHYASQQIKQISTQLDQEW 382
Query: 333 YKSSVELDESMDQVTME---HSQAE-YNPRVD--CKLLVENKSSVECDE---SVEHNQSM 383
+ LDE + M H +AE + VD CK+ E E + ++ H+QS+
Sbjct: 383 KSFAAALDERSTILAMSAVFHQKAEQFLSGVDAWCKMCSEGGLPSEMQDLELAIHHHQSL 442
Query: 384 EHKTMEAHYEQSLDNRSPVDNYNQPVDGGNPE 415
+ +A+ E S D ++ +D +P+ GN E
Sbjct: 443 YEQVTQAYTEVSQDGKALLDVLQRPLSPGNSE 474
>sp|A2CG49|KALRN_MOUSE Kalirin OS=Mus musculus GN=Kalrn PE=1 SV=1
Length = 2964
Score = 38.9 bits (89), Expect = 0.096, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 12/152 (7%)
Query: 276 AVSVGFKSDNAAEHNHSARRSSGGE---ERLEKFKIAVQDAGFNDITKRQEDCRQLVKEY 332
VS D +HNH A S R+ + +AG + ++ QL +E+
Sbjct: 323 GVSYQHALDLQTQHNHFAMNSMNAYVNINRIMSVASRLSEAGHYASQQIKQISTQLDQEW 382
Query: 333 YKSSVELDESMDQVTME---HSQAE-YNPRVD--CKLLVENKSSVECDE---SVEHNQSM 383
+ LDE + M H +AE + VD CK+ E E + ++ H+QS+
Sbjct: 383 KSFAAALDERSTILAMSAVFHQKAEQFLSGVDAWCKMCSEGGLPSEMQDLELAIHHHQSL 442
Query: 384 EHKTMEAHYEQSLDNRSPVDNYNQPVDGGNPE 415
+ +A+ E S D ++ +D +P+ GN E
Sbjct: 443 YEQVTQAYTEVSQDGKALLDVLQRPLSPGNSE 474
>sp|Q48CM7|BETA_PSE14 Choline dehydrogenase OS=Pseudomonas syringae pv. phaseolicola
(strain 1448A / Race 6) GN=betA PE=3 SV=1
Length = 568
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 337 VELDESMDQVTMEHSQAEYNPRVDCKLLVENKSSVECDESVEHNQSM 383
V+ DE++DQ EH++ Y+P CK+ + + V+ V QS+
Sbjct: 458 VQSDEALDQFVREHAETAYHPSCSCKMGTDEMAVVDGQGRVHGLQSL 504
>sp|Q4ZM63|BETA_PSEU2 Choline dehydrogenase OS=Pseudomonas syringae pv. syringae (strain
B728a) GN=betA PE=3 SV=1
Length = 568
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 337 VELDESMDQVTMEHSQAEYNPRVDCKLLVENKSSVECDESVEHNQSM 383
V+ DE++DQ EH++ Y+P CK+ + + V+ V QS+
Sbjct: 458 VQSDEALDQFVREHAETAYHPSCSCKMGTDEMAVVDGQGRVHGLQSL 504
>sp|Q6BNL1|PAN1_DEBHA Actin cytoskeleton-regulatory complex protein PAN1 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=PAN1 PE=3 SV=2
Length = 1449
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 70/181 (38%), Gaps = 31/181 (17%)
Query: 96 PASVGFRSDNAASVGFRSDNAASVGFRSDNPASMGFRSDNPA----SIGFRSDNPASV-G 150
P + GF +N+ +V S A GF + M R+ NP + GF S+N A +
Sbjct: 255 PQATGF--NNSGAVPSTSFQAQPTGFGASQ-EMMAQRTGNPPLPQQATGFGSNNVAPLLP 311
Query: 151 FRSDNAVSVGFRSDNPAFVVFRSDN----PASVGFRSDNPASVGFRSDNPASVGF--RSD 204
R+ + + + ++ P + GF++ NP G + P S GF R +
Sbjct: 312 QRTGGGTLIPLQPQQTSNLIPAQKTGPLQPQTTGFQTQNPHQTGPGALQPQSTGFAQRMN 371
Query: 205 N--------PASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNP 256
N P S GF+ P S GF+ P S GF+ P G P
Sbjct: 372 NGPLQAQTTGFQQQTTGFQPQSTGFQ---PQSTGFQ---PQSTGFQ---PQQTGPLQAQP 422
Query: 257 T 257
T
Sbjct: 423 T 423
>sp|P46593|HWP1_CANAL Hyphal wall protein 1 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=HWP1 PE=2 SV=4
Length = 634
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 23/66 (34%)
Query: 204 DNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPTSVGFRS 263
DNP DNP DNP DNP DNP DNP +
Sbjct: 115 DNPPQPDVPCDNPPQPDVPCDNPPQPDIPCDNPPQPDIPCDNPPQPDQPDDNPPIPNIPT 174
Query: 264 DNISSV 269
D I ++
Sbjct: 175 DWIPNI 180
Score = 32.7 bits (73), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 20/61 (32%)
Query: 174 DNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRS 233
DNP DNP DNP DNP DNP DNP +
Sbjct: 115 DNPPQPDVPCDNPPQPDVPCDNPPQPDIPCDNPPQPDIPCDNPPQPDQPDDNPPIPNIPT 174
Query: 234 D 234
D
Sbjct: 175 D 175
Score = 32.7 bits (73), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 20/61 (32%)
Query: 184 DNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRS 243
DNP DNP DNP DNP DNP DNP +
Sbjct: 115 DNPPQPDVPCDNPPQPDVPCDNPPQPDIPCDNPPQPDIPCDNPPQPDQPDDNPPIPNIPT 174
Query: 244 D 244
D
Sbjct: 175 D 175
Score = 32.7 bits (73), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 20/61 (32%)
Query: 194 DNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRS 253
DNP DNP DNP DNP DNP DNP +
Sbjct: 115 DNPPQPDVPCDNPPQPDVPCDNPPQPDIPCDNPPQPDIPCDNPPQPDQPDDNPPIPNIPT 174
Query: 254 D 254
D
Sbjct: 175 D 175
>sp|Q10778|PPE21_MYCTU Uncharacterized PPE family protein PPE21 OS=Mycobacterium
tuberculosis GN=ppe21 PE=3 SV=2
Length = 678
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 90/245 (36%), Gaps = 11/245 (4%)
Query: 103 SDNAASVGFRSDNAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAVSVGFR 162
S N SV + N + S N S N + S N ++ + S N S
Sbjct: 219 SANTGSVNLGNANIGDLNLGSGNIGSYNLGGGNTGDLNPDSGNTGTLNWGSGNIGSYNLG 278
Query: 163 SDNPAFVVFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFRSDNPASVGFR 222
N S N F N ++ N + F N +V F + N F
Sbjct: 279 GGNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFG 338
Query: 223 SDNPAS--VGFRSDNPASVGFRSDNPASVGFRSDNPTSVGFRSDNISS--VGFKSDNAVS 278
S N S +GF + ++GF + ++GF +GF + N S +GF + +
Sbjct: 339 SGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGN 398
Query: 279 VGFKSDNAAEHNHSARRSSGGEERL--EKFKIAVQDAGFND---ITKRQEDCRQLVKEYY 333
+GF N+ +N S G L E A + +GF + ++ + QL ++
Sbjct: 399 IGFF--NSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWF 456
Query: 334 KSSVE 338
S+
Sbjct: 457 NSATT 461
>sp|Q6MWY2|PPE54_MYCTU Uncharacterized PPE family protein PPE54 OS=Mycobacterium
tuberculosis GN=ppe54 PE=3 SV=1
Length = 2523
Score = 33.9 bits (76), Expect = 2.9, Method: Composition-based stats.
Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 10/184 (5%)
Query: 7 ASVGFRSDKPASMGFRSDNAASVGFRSDNPAS--IGFRSDNPASVGFRSDNAASVGFRSD 64
++GF + + G + ++GF + + IG DN G + + +VG +
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 65 NAASVGFRSDNPASMGFRSDNPASIGFRSDNPASVGFRSDNAASVGFRSDNAASVG-FRS 123
+VGF + + G + + G + AS G + + G + + + G F +
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 124 DNPASMGFRSDNPASI--GFRSDNPASVGFRSDNAVSVG-FRSDNPAF-VVFRSDNPASV 179
+ GF NP S+ G+ + + G + V+ G F S N + V++R D +
Sbjct: 374 GEANTGGF---NPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGVLWRGDYQGLL 430
Query: 180 GFRS 183
GF S
Sbjct: 431 GFSS 434
>sp|Q88AE7|BETA_PSESM Choline dehydrogenase OS=Pseudomonas syringae pv. tomato (strain
DC3000) GN=betA PE=3 SV=1
Length = 568
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 337 VELDESMDQVTMEHSQAEYNPRVDCKLLVENKSSVECDESVEHNQSM 383
V+ DE++DQ EH++ Y+P CK+ + + V+ V Q++
Sbjct: 458 VQSDEALDQFVREHAETAYHPSCSCKMGTDEMAVVDGQGRVHGMQNL 504
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.127 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 190,109,669
Number of Sequences: 539616
Number of extensions: 8232616
Number of successful extensions: 24258
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 15435
Number of HSP's gapped (non-prelim): 1568
length of query: 491
length of database: 191,569,459
effective HSP length: 122
effective length of query: 369
effective length of database: 125,736,307
effective search space: 46396697283
effective search space used: 46396697283
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)