Query psy16581
Match_columns 194
No_of_seqs 127 out of 739
Neff 5.4
Searched_HMMs 13730
Date Fri Aug 16 16:39:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16581.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/16581hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1gl1i_ g.4.1.1 (I:) Protease 56.0 1.3 9.7E-05 24.9 0.3 17 50-66 14-32 (34)
2 d1tv0a_ g.9.1.1 (A:) Defensin- 51.3 0.55 4E-05 26.0 -1.8 27 152-178 3-30 (32)
3 d2et1a1 b.82.1.2 (A:1-201) Ger 18.0 35 0.0026 25.5 2.8 26 117-142 2-29 (201)
4 d1nbja_ g.3.3.2 (A:) Cycloviol 14.9 15 0.0011 19.8 -0.2 13 59-71 18-30 (30)
5 d2ptaa_ g.3.7.2 (A:) Pandinus 13.0 30 0.0022 18.9 0.8 10 47-56 25-34 (35)
6 d1o9aa1 g.27.1.1 (A:17-60) Fib 12.7 35 0.0026 20.0 1.1 11 49-59 26-36 (44)
7 d1dfsa_ g.46.1.1 (A:) Metallot 11.5 18 0.0013 19.4 -0.5 12 175-186 5-16 (31)
8 d1wema_ g.50.1.2 (A:) Death as 9.6 61 0.0044 19.7 1.6 24 154-177 21-44 (76)
9 d1nekb2 d.15.4.2 (B:1-106) Suc 8.9 38 0.0027 22.9 0.3 11 55-65 57-67 (106)
10 d1x6oa2 b.40.4.5 (A:87-165) C- 8.9 88 0.0064 20.3 2.2 20 69-88 37-56 (79)
No 1
>d1gl1i_ g.4.1.1 (I:) Protease inhibitor PMP-C {Migratory locust (Locusta migratoria) [TaxId: 7004]}
Probab=56.01 E-value=1.3 Score=24.91 Aligned_cols=17 Identities=41% Similarity=1.192 Sum_probs=14.3
Q ss_pred ceeee--ccccCCcchhhh
Q psy16581 50 VTCKC--HGVSGSCSMITC 66 (194)
Q Consensus 50 ~~CKC--HGvSGSC~~kTC 66 (194)
..|+| .|-|++|+.|.|
T Consensus 14 ntcrc~s~gksaactlkac 32 (34)
T d1gl1i_ 14 NTCRCGADGKSAACTLKAC 32 (34)
T ss_dssp SEEEECTTSSCEEEECCCC
T ss_pred ceeeecCCCcccceeeccC
Confidence 46777 799999999987
No 2
>d1tv0a_ g.9.1.1 (A:) Defensin-related cryptdin 4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=51.25 E-value=0.55 Score=25.98 Aligned_cols=27 Identities=30% Similarity=0.780 Sum_probs=18.3
Q ss_pred cc-cCCCeeEEEEEEEEeeCcEEEeeeE
Q psy16581 152 LC-CGRGYNTAKVTRTFRCRCKFHWCCH 178 (194)
Q Consensus 152 LC-CGRGy~t~~~~~~~~C~CkF~WCC~ 178 (194)
|| |-.|+-..-+.+.-.|.=+|.+||+
T Consensus 3 lcycrkghckrgervrgtcgirflyccp 30 (32)
T d1tv0a_ 3 LCYCRKGHCKRGERVRGTCGIRFLYCCP 30 (32)
T ss_dssp CCEEEESCCSSCEECSSCSSSSEEEECC
T ss_pred eEEEccCcccCCcEeeeecceeEEEEcC
Confidence 44 4445544445566789999999996
No 3
>d2et1a1 b.82.1.2 (A:1-201) Germin {Barley (Hordeum vulgare) [TaxId: 4513]}
Probab=17.99 E-value=35 Score=25.48 Aligned_cols=26 Identities=23% Similarity=0.650 Sum_probs=19.2
Q ss_pred cCCC--CCcccCCCCCCCCCCCCcccCC
Q psy16581 117 DESP--NYCVRNPSLGSLGTQGRECNRT 142 (194)
Q Consensus 117 e~SP--dyC~~n~~~Gs~GT~GR~Cn~~ 142 (194)
|++| |||..|.........|-.|.+.
T Consensus 2 dp~~lqdfcvad~~~~~~~~~g~~ck~~ 29 (201)
T d2et1a1 2 DPDPLQDFCVADLDGKAVSVNGHTCKPM 29 (201)
T ss_dssp CCCCSSSCCCBCCCTTSCCCSSCCBCCG
T ss_pred CCcccceeEeecCCCCccccCCcccCCh
Confidence 4566 9999997654467789999753
No 4
>d1nbja_ g.3.3.2 (A:) Cycloviolacin O1 {Plant (Viola odorata) [TaxId: 97441]}
Probab=14.90 E-value=15 Score=19.76 Aligned_cols=13 Identities=31% Similarity=0.705 Sum_probs=10.5
Q ss_pred CCcchhhhhccCC
Q psy16581 59 GSCSMITCWQQLT 71 (194)
Q Consensus 59 GSC~~kTCW~~lp 71 (194)
-||+-|.|+.+||
T Consensus 18 c~c~~kvcyn~~p 30 (30)
T d1nbja_ 18 CSCSNRVCYNGIP 30 (30)
T ss_dssp CEEETTEEESSCC
T ss_pred ccccCceeecCCC
Confidence 3688899998887
No 5
>d2ptaa_ g.3.7.2 (A:) Pandinus toxin {Emperor scorpion (Pandinus imperator), PITX-Ka [TaxId: 55084]}
Probab=13.01 E-value=30 Score=18.89 Aligned_cols=10 Identities=40% Similarity=1.022 Sum_probs=7.8
Q ss_pred cccceeeecc
Q psy16581 47 ASKVTCKCHG 56 (194)
Q Consensus 47 ~~~~~CKCHG 56 (194)
-|.++|||-|
T Consensus 25 cmnrkckcfg 34 (35)
T d2ptaa_ 25 CMNRKCKCFG 34 (35)
T ss_dssp EETTEEEESC
T ss_pred Hhcccccccc
Confidence 4678899876
No 6
>d1o9aa1 g.27.1.1 (A:17-60) Fibronectin {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.70 E-value=35 Score=19.96 Aligned_cols=11 Identities=36% Similarity=0.812 Sum_probs=8.9
Q ss_pred cceeeeccccC
Q psy16581 49 KVTCKCHGVSG 59 (194)
Q Consensus 49 ~~~CKCHGvSG 59 (194)
...|.|+|+|.
T Consensus 26 ~l~CTC~Gg~~ 36 (44)
T d1o9aa1 26 ALVCTCYGGSR 36 (44)
T ss_dssp EEEEEECSSTT
T ss_pred eEEEEEccCcc
Confidence 46799999983
No 7
>d1dfsa_ g.46.1.1 (A:) Metallothionein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=11.49 E-value=18 Score=19.44 Aligned_cols=12 Identities=42% Similarity=1.331 Sum_probs=9.2
Q ss_pred eeeEEeccccce
Q psy16581 175 WCCHVQCQQCTE 186 (194)
Q Consensus 175 WCC~V~C~~C~~ 186 (194)
-||+|.|.+|-+
T Consensus 5 sccpv~c~kcaq 16 (31)
T d1dfsa_ 5 SCCPVGCSKCAQ 16 (31)
T ss_dssp SSSCSSCSSSSS
T ss_pred ccCCccHHHHhc
Confidence 378999988854
No 8
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=9.63 E-value=61 Score=19.67 Aligned_cols=24 Identities=29% Similarity=0.415 Sum_probs=16.6
Q ss_pred cCCCeeEEEEEEEEeeCcEEEeee
Q psy16581 154 CGRGYNTAKVTRTFRCRCKFHWCC 177 (194)
Q Consensus 154 CGRGy~t~~~~~~~~C~CkF~WCC 177 (194)
||+.+.....+.=+.|+.=||+-|
T Consensus 21 C~~~~~~~~mi~Cd~C~~w~H~~C 44 (76)
T d1wema_ 21 CRQPHNNRFMICCDRCEEWFHGDC 44 (76)
T ss_dssp TCCCCCSSCEEECSSSCCEEEHHH
T ss_pred CCCccCCCeEEEECCCCCcCCccc
Confidence 788776654455567888888766
No 9
>d1nekb2 d.15.4.2 (B:1-106) Succinate dehydogenase iron-sulfur protein, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=8.94 E-value=38 Score=22.92 Aligned_cols=11 Identities=36% Similarity=0.483 Sum_probs=10.2
Q ss_pred ccccCCcchhh
Q psy16581 55 HGVSGSCSMIT 65 (194)
Q Consensus 55 HGvSGSC~~kT 65 (194)
||+-|||+++.
T Consensus 57 ~giCGsCam~I 67 (106)
T d1nekb2 57 EGVCGSDGLNM 67 (106)
T ss_dssp SSCSCTTEEEE
T ss_pred CCCCCcceEEE
Confidence 89999999986
No 10
>d1x6oa2 b.40.4.5 (A:87-165) C-terminal domain of eukaryotic initiation translation factor 5a (eIF5a) {Leishmania infantum [TaxId: 5671]}
Probab=8.87 E-value=88 Score=20.27 Aligned_cols=20 Identities=15% Similarity=0.483 Sum_probs=16.9
Q ss_pred cCCChhHHHHHHHHcccccc
Q psy16581 69 QLTPFREIGEFLRDKYDSAT 88 (194)
Q Consensus 69 ~lp~f~~Vg~~Lk~kY~~A~ 88 (194)
.||+..++|+.++..|+.-.
T Consensus 37 kLP~d~elg~~I~~~f~~gk 56 (79)
T d1x6oa2 37 DMPPDPALATQIKEQFDSGK 56 (79)
T ss_dssp BCCSCHHHHHHHHHHHHTTC
T ss_pred CCCCchHHHHHHHHHHhCCC
Confidence 48888999999999998643
Done!