BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16582
(109 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|444841769|gb|AGE12617.1| Dicer 2 [Nilaparvata lugens]
Length = 1448
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQ 66
FN G TN+L+A+DVLEEGID+Q+CN VIKFDPP RSY+QSK R I+++
Sbjct: 341 FNGGDTNVLIASDVLEEGIDVQTCNTVIKFDPPTTMRSYIQSKGRARTRQSKFYIMTE 398
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 53 FTVVRHKAEQILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQRTIIFCQRR 104
T+VR + +LS+Y ER +++ S K+ +LL+L + + + +IF RR
Sbjct: 239 LTLVRKISFDVLSKYEGEERIIRFVSNKVLKLLELFKGFKETDKALIFVTRR 290
>gi|388565188|gb|AFK73581.1| dicer-2 [Nilaparvata lugens]
Length = 1656
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQ 66
FN G TN+L+A+DVLEEGID+Q+CN VIKFDPP RSY+QSK R I+++
Sbjct: 459 FNGGDTNVLIASDVLEEGIDVQTCNTVIKFDPPTTMRSYIQSKGRARTRQSKFYIMTE 516
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 53 FTVVRHKAEQILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQRTIIFCQRR 104
T+VR + +LS+Y ER +++ S K+ +LL+L + + + +IF RR
Sbjct: 357 LTLVRKISFDVLSKYEGEERIIRFVSNKVLKLLELFKGFKETDKALIFVTRR 408
>gi|444841767|gb|AGE12616.1| Dicer 2 [Laodelphax striatella]
Length = 1654
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 44/66 (66%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQY 67
SFN+G N L+A+DVLEEGID+Q CN+V+KF PP RSY+QSK R IL++
Sbjct: 461 SFNKGKKNFLIASDVLEEGIDVQICNMVVKFAPPTTMRSYIQSKGRARSRISKYYILTET 520
Query: 68 PKSERY 73
SE Y
Sbjct: 521 SNSECY 526
>gi|406034947|emb|CCF23094.1| Dicer 2 [Blattella germanica]
Length = 1649
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G N+LVA++VLEEG+DIQ CNLV+KFD P + RSYVQSK RH+ + P
Sbjct: 463 FQTGEKNLLVASNVLEEGMDIQKCNLVVKFDLPLNYRSYVQSKG--RARHRTSHYILMVP 520
Query: 69 KSE-----RYLQYNSPK--INRLL 85
S+ +Y +Y + + I RLL
Sbjct: 521 SSDNTFMSKYEEYKATEKAIERLL 544
>gi|346327498|gb|EGX97094.1| RNA helicase/RNAse III, putative [Cordyceps militaris CM01]
Length = 1392
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 61/113 (53%), Gaps = 14/113 (12%)
Query: 2 DVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA--------F 53
D+QT+ F G N+LVAT VLEEGID+ +CNLVI FD PQ +S++Q +
Sbjct: 445 DLQTLHEFREGTINLLVATAVLEEGIDVPACNLVICFDSPQSPKSFIQRRGRARMQDSTL 504
Query: 54 TVVRHKAEQILSQYPKSERYLQ---YNSPKINRLLQLLRRYNPDQRTIIFCQR 103
+ HK I+ ++ E +Q +S + ++ LQ L R + I FC R
Sbjct: 505 LLFTHKESSIIDEWAVFEEEIQKLCQDSEREHQHLQTLERLD---EGIDFCFR 554
>gi|224109196|ref|XP_002315119.1| dicer-like protein [Populus trichocarpa]
gi|222864159|gb|EEF01290.1| dicer-like protein [Populus trichocarpa]
Length = 1408
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
M + + F +G+ NI+VAT +LEEG+D+QSCNLVI+FDPP S++QS+
Sbjct: 436 MQNEIVEEFRKGMVNIIVATSILEEGLDVQSCNLVIRFDPPSSVSSFIQSRG 487
>gi|400598379|gb|EJP66096.1| RNase3 domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 1402
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 14/113 (12%)
Query: 2 DVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA--------F 53
D +T+ F RG N+LVAT VLEEGIDI +CNLVI FD P++ +S++Q +
Sbjct: 449 DCKTLQDFRRGEVNLLVATSVLEEGIDIPACNLVICFDSPKNPKSFIQRRGRARMQDSQL 508
Query: 54 TVVRHKAEQILSQYPKSERYLQ---YNSPKINRLLQLLRRYNPDQRTIIFCQR 103
+ H+ + + E +Q +S + + LQ L R + D + FC R
Sbjct: 509 IIFTHQGHSLTDHWAIFEDEIQKLCQDSERERQQLQTLERLDED---VDFCFR 558
>gi|378405592|gb|AFB82635.1| dicer-2 [Marsupenaeus japonicus]
Length = 1502
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 40/49 (81%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+T+ +F RG TN L++T VLEEG+DI+ CN+V++FD PQ+ R+YVQS+
Sbjct: 422 ETLENFRRGETNFLISTSVLEEGVDIRKCNVVVRFDMPQNYRAYVQSRG 470
>gi|341893002|gb|EGT48937.1| CBN-DCR-1 protein [Caenorhabditis brenneri]
Length = 1927
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F+RG N+L+AT VLEEG+D++ CN+VIKFD P RSYVQSK
Sbjct: 450 FHRGDLNVLIATSVLEEGVDVKQCNVVIKFDRPTDMRSYVQSKG 493
>gi|340372191|ref|XP_003384628.1| PREDICTED: endoribonuclease Dicer-like [Amphimedon queenslandica]
Length = 1530
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/49 (59%), Positives = 37/49 (75%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
Q + F +G N+LVAT V+EEG+D+ CNLVI+FD PQ+ RSYVQSK
Sbjct: 469 QVLGKFRKGTVNLLVATSVIEEGVDVPRCNLVIRFDLPQNFRSYVQSKG 517
>gi|357115872|ref|XP_003559709.1| PREDICTED: endoribonuclease Dicer homolog 2a-like [Brachypodium
distachyon]
Length = 1402
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 12/76 (15%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA---------FTVVRH 58
SF RG +++VAT VLEEG+D+ SCNLVI+FDPP RS++QS+ +VR
Sbjct: 444 SFRRGEVHLIVATQVLEEGLDVPSCNLVIRFDPPATVRSFIQSRGRARMQNSDYVLLVRR 503
Query: 59 KAEQILSQYPKSERYL 74
LS K+E+YL
Sbjct: 504 GDAAALS---KTEKYL 516
>gi|328905041|gb|AEB54796.1| dicer 2 [Litopenaeus vannamei]
Length = 1502
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 40/49 (81%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+T+ +F +G TN L++T VLEEG+DI+ CN+V++FD PQ+ R+YVQS+
Sbjct: 422 ETLENFRKGETNFLISTSVLEEGVDIRKCNVVVRFDMPQNYRAYVQSRG 470
>gi|391332351|ref|XP_003740599.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1610
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%), Gaps = 4/61 (6%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+T+ +F G+ N+L+AT+V+EEG+D+ +CNLV++FD P+ RSY QSK R +A Q
Sbjct: 426 RTIAAFRDGVYNLLLATNVIEEGMDVPACNLVVRFDAPRDARSYTQSKG----RARARQS 481
Query: 64 L 64
L
Sbjct: 482 L 482
>gi|6714410|gb|AAF26098.1|AC012328_1 unknown protein [Arabidopsis thaliana]
Length = 2042
Score = 64.7 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 36/44 (81%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F RG+ NI+VAT +LEEG+D+QSCNLVI+FDP + S++QS+
Sbjct: 1098 FRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRG 1141
>gi|297832974|ref|XP_002884369.1| hypothetical protein ARALYDRAFT_317213 [Arabidopsis lyrata subsp.
lyrata]
gi|297330209|gb|EFH60628.1| hypothetical protein ARALYDRAFT_317213 [Arabidopsis lyrata subsp.
lyrata]
Length = 2033
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 36/44 (81%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F RG+ NI+VAT +LEEG+D+QSCNLVI+FDP + S++QS+
Sbjct: 1089 FRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRG 1132
>gi|452988240|gb|EME87995.1| hypothetical protein MYCFIDRAFT_104430, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 1360
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 6/60 (10%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQY 67
+F RG N++VAT+VLEEGIDI +CNLVI FDPPQ+ S+VQ R +A Q S+Y
Sbjct: 431 AFRRGEKNLMVATNVLEEGIDISACNLVICFDPPQNLVSFVQR------RGRARQQHSKY 484
>gi|145331748|ref|NP_001078101.1| protein dicer-like 2 [Arabidopsis thaliana]
gi|332640404|gb|AEE73925.1| protein dicer-like 2 [Arabidopsis thaliana]
Length = 1374
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 36/44 (81%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F RG+ NI+VAT +LEEG+D+QSCNLVI+FDP + S++QS+
Sbjct: 430 FRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRG 473
>gi|94450856|gb|ABF19798.1| dicer-like 2 spliceform 2 [Arabidopsis thaliana]
Length = 1374
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 36/44 (81%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F RG+ NI+VAT +LEEG+D+QSCNLVI+FDP + S++QS+
Sbjct: 430 FRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRG 473
>gi|145338056|ref|NP_566199.4| protein dicer-like 2 [Arabidopsis thaliana]
gi|334185051|ref|NP_001189798.1| protein dicer-like 2 [Arabidopsis thaliana]
gi|322518659|sp|Q3EBC8.2|DCL2_ARATH RecName: Full=Endoribonuclease Dicer homolog 2; AltName:
Full=Dicer-like protein 2; Short=AtDCL2
gi|332640403|gb|AEE73924.1| protein dicer-like 2 [Arabidopsis thaliana]
gi|332640405|gb|AEE73926.1| protein dicer-like 2 [Arabidopsis thaliana]
Length = 1388
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 36/44 (81%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F RG+ NI+VAT +LEEG+D+QSCNLVI+FDP + S++QS+
Sbjct: 444 FRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRG 487
>gi|94450854|gb|ABF19797.1| dicer-like 2 spliceform 1 [Arabidopsis thaliana]
Length = 1386
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 36/44 (81%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F RG+ NI+VAT +LEEG+D+QSCNLVI+FDP + S++QS+
Sbjct: 442 FRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRG 485
>gi|339242189|ref|XP_003377020.1| putative ribosomal protein S7e [Trichinella spiralis]
gi|316974223|gb|EFV57735.1| putative ribosomal protein S7e [Trichinella spiralis]
Length = 2029
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 16/121 (13%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA--------FTV 55
+ + +F G N+L AT +LEEGID++ CN VI+FD P RS+VQSK +T+
Sbjct: 793 EVLKNFRHGKLNLLAATSILEEGIDVRHCNYVIRFDTPLTFRSFVQSKGRARQKIAYYTI 852
Query: 56 V-----RHKAEQILSQYPKSERYLQYNSPKINRLLQLL---RRYNPDQRTIIFCQRRATI 107
+ +++L+ + ++E++L+ N +N L + R Y+ + + C++ +
Sbjct: 853 LVQDRFLESFQEMLNSFVETEKFLKVNGRDLNILTRTKDRDRSYSGNNDQVDNCRKEVNL 912
Query: 108 P 108
P
Sbjct: 913 P 913
>gi|391348710|ref|XP_003748587.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1732
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ M F GI N++ AT V+EEG+D+ +CNL+++FDPP RSY QSK
Sbjct: 532 KVMRDFRGGIYNLMFATSVIEEGMDVPACNLIVRFDPPMDVRSYTQSKG 580
>gi|339261112|ref|XP_003368069.1| conserved hypothetical protein [Trichinella spiralis]
gi|316963063|gb|EFV48890.1| conserved hypothetical protein [Trichinella spiralis]
Length = 654
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 16/121 (13%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA--------FTV 55
+ + +F G N+L AT +LEEGID++ CN VI+FD P RS+VQSK +T+
Sbjct: 166 EVLKNFRHGKLNLLAATSILEEGIDVRHCNYVIRFDTPLTFRSFVQSKGRARQKIAYYTI 225
Query: 56 VRH-----KAEQILSQYPKSERYLQYNSPKINRLLQLL---RRYNPDQRTIIFCQRRATI 107
+ +++L+ + ++E++L+ N +N L + R Y+ + + C++ +
Sbjct: 226 LVQDRFLKSFQEMLNSFVETEKFLKVNGRDLNILTRTKDRDRSYSGNNDQVDNCRKEVNL 285
Query: 108 P 108
P
Sbjct: 286 P 286
>gi|224101241|ref|XP_002312197.1| dicer-like protein [Populus trichocarpa]
gi|222852017|gb|EEE89564.1| dicer-like protein [Populus trichocarpa]
Length = 1468
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F +G+ NI+VAT +LEEG+D+QSCNLVI+FDP S++QS+
Sbjct: 495 FRKGMVNIIVATSILEEGLDVQSCNLVIRFDPSATVSSFIQSRG 538
>gi|357448551|ref|XP_003594551.1| Endoribonuclease Dicer [Medicago truncatula]
gi|355483599|gb|AES64802.1| Endoribonuclease Dicer [Medicago truncatula]
Length = 1418
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRH 58
F +G+ NI+VAT +LEEG+D+QSCNLVI+FDP S+VQS+ +R+
Sbjct: 482 FRKGLVNIIVATSILEEGLDVQSCNLVIRFDPSPTVCSFVQSRGRARMRN 531
>gi|405960420|gb|EKC26346.1| Endoribonuclease Dicer [Crassostrea gigas]
Length = 1759
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYPKSERYL 74
N+LV+T VLE+GID+ CNL++KFDPP+ +SY QSK R IL + K E ++
Sbjct: 534 NLLVSTTVLEDGIDVPKCNLIVKFDPPRSYKSYSQSKGRARARDSEYLILVEENKKEMFM 593
Query: 75 Q-YN 77
Q YN
Sbjct: 594 QDYN 597
>gi|308485595|ref|XP_003104996.1| CRE-DCR-1 protein [Caenorhabditis remanei]
gi|308257317|gb|EFP01270.1| CRE-DCR-1 protein [Caenorhabditis remanei]
Length = 1941
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F++ N+L+AT VLEEG+D++ CNLVIKFD P RSYVQSK
Sbjct: 450 FHKNEINVLIATSVLEEGVDVKQCNLVIKFDRPLDMRSYVQSKG 493
>gi|379987678|gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]
Length = 1403
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F +G+ NI+VAT +LEEG+D+QSCNLVI+FDP S++QS+
Sbjct: 443 FRKGVVNIIVATSILEEGLDVQSCNLVIRFDPSATVCSFIQSRG 486
>gi|224141703|ref|XP_002324204.1| dicer-like protein [Populus trichocarpa]
gi|222865638|gb|EEF02769.1| dicer-like protein [Populus trichocarpa]
Length = 1492
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 23/100 (23%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKA 60
M ++T+ SF G N+L ATDV+EEGI + +C+ VI+FD P+ RSYVQS+
Sbjct: 368 MQMETLESFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQSRG-------- 419
Query: 61 EQILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQRTIIF 100
R Q NS + +L R N QR +F
Sbjct: 420 -----------RARQNNS----HFITMLERGNTKQRDQLF 444
>gi|268576156|ref|XP_002643058.1| C. briggsae CBR-DCR-1 protein [Caenorhabditis briggsae]
Length = 1863
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F++ N+L+AT VLEEG+D++ CN+VIKFD P RSYVQSK
Sbjct: 446 TLRRFHKSEINVLIATSVLEEGVDVKQCNVVIKFDRPLDMRSYVQSKG 493
>gi|392567716|gb|EIW60891.1| hypothetical protein TRAVEDRAFT_146565 [Trametes versicolor
FP-101664 SS1]
Length = 1459
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQIL 64
T+ F N+LVAT V EEG+D +C+LVI+FDP QH YVQS+ RHK +
Sbjct: 434 TVKMFRERAINVLVATSVAEEGLDFPACDLVIRFDPVQHMVGYVQSRG--RARHKTSTFI 491
Query: 65 -----SQYPKSERYLQYNS--PKINRLLQ 86
++ERYLQ++ P + ++ Q
Sbjct: 492 IMLQEGAQAQAERYLQFSQSEPHLKQVYQ 520
>gi|392895692|ref|NP_498761.2| Protein DCR-1 [Caenorhabditis elegans]
gi|408360292|sp|P34529.3|DCR1_CAEEL RecName: Full=Endoribonuclease dcr-1
gi|379657006|emb|CCD71200.2| Protein DCR-1 [Caenorhabditis elegans]
Length = 1910
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F+R N L+AT VLEEG+D++ CNLVIKFD P RSYVQSK
Sbjct: 449 FHRNEINCLIATSVLEEGVDVKQCNLVIKFDRPLDMRSYVQSKG 492
>gi|425626934|gb|AFX89025.1| DCR2 [Mayetiola destructor]
Length = 1646
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 32/44 (72%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F R N++V T VLEEGID+Q CNLVI FD P+H R YVQ+K
Sbjct: 463 FKRDEVNLIVTTSVLEEGIDLQECNLVIAFDRPEHYRQYVQTKG 506
>gi|147817099|emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
Length = 2076
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 23/97 (23%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+T+ SF G N+L ATDV+EEGI + +C+ VI+FD P+ RSYVQS R +A Q
Sbjct: 1474 ETLESFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQS------RGRARQS 1527
Query: 64 LSQYPKSERYLQYNSPKINRLLQLLRRYNPDQRTIIF 100
SQ+ + +L R N +QR +F
Sbjct: 1528 DSQF-----------------IIMLERGNTEQRDQLF 1547
>gi|116205049|ref|XP_001228335.1| hypothetical protein CHGG_10408 [Chaetomium globosum CBS 148.51]
gi|88176536|gb|EAQ84004.1| hypothetical protein CHGG_10408 [Chaetomium globosum CBS 148.51]
Length = 1227
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 37/48 (77%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
++LSF +G N+LVAT VLEEGID+ +CNLVI FD P + +S++Q +
Sbjct: 451 SLLSFRKGTINLLVATSVLEEGIDVPACNLVICFDKPDNLKSFIQRRG 498
>gi|297735235|emb|CBI17597.3| unnamed protein product [Vitis vinifera]
Length = 1340
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 35/44 (79%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F +G+ N++V+T +LEEG+D+QSCNLVI+FDP S++QS+
Sbjct: 391 FRKGMVNVIVSTSILEEGLDVQSCNLVIRFDPSATVCSFIQSRG 434
>gi|359476600|ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-like [Vitis vinifera]
Length = 1394
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 35/44 (79%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F +G+ N++V+T +LEEG+D+QSCNLVI+FDP S++QS+
Sbjct: 445 FRKGMVNVIVSTSILEEGLDVQSCNLVIRFDPSATVCSFIQSRG 488
>gi|429847845|gb|ELA23398.1| dicer-like protein 2 [Colletotrichum gloeosporioides Nara gc5]
Length = 1453
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 2 DVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAE 61
D+Q++ F G N+L+AT VLEEGID+ +CNLVI FD P + +S++Q + R +
Sbjct: 488 DLQSLHQFRSGKINLLIATSVLEEGIDVPACNLVICFDRPPNLKSFIQRRG--RARMRDS 545
Query: 62 QILSQYPKSERYLQ 75
++L +SE + Q
Sbjct: 546 KLLMLLDRSETFSQ 559
>gi|147833654|emb|CAN77284.1| hypothetical protein VITISV_043738 [Vitis vinifera]
Length = 1296
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 35/44 (79%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F +G+ N++V+T +LEEG+D+QSCNLVI+FDP S++QS+
Sbjct: 347 FRKGMVNVIVSTSILEEGLDVQSCNLVIRFDPSATVCSFIQSRG 390
>gi|310794641|gb|EFQ30102.1| RNase3 domain-containing protein [Glomerella graminicola M1.001]
Length = 1447
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 2 DVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAE 61
D+Q++ F G TN+L+AT VLEEGID+ +CN+VI FD P + +S++Q + R K
Sbjct: 483 DLQSLHQFRNGKTNLLIATSVLEEGIDVPACNVVICFDYPPNLKSFIQRRG--RARMKDS 540
Query: 62 QILSQYPKSE 71
++L + SE
Sbjct: 541 KLLMLHDSSE 550
>gi|414453403|gb|AFX00003.1| Dicer [Mnemiopsis leidyi]
Length = 2002
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
Q ++ F G NIL+AT V+EEG+DI +CN+VI++D PQ R+YVQS+
Sbjct: 861 QALIDFREGKHNILLATSVVEEGLDIPACNIVIRYDFPQTYRAYVQSRG 909
>gi|189908862|gb|ACE60552.1| dicer-like protein 2 [Brassica rapa]
Length = 1392
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 38/49 (77%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+T+ F +G+ NI+V+T +LEEG+D+QSCNLV+ FDP + S++QS+
Sbjct: 438 ETVEDFRKGLVNIIVSTSILEEGLDVQSCNLVVGFDPASNICSFIQSQG 486
>gi|383856609|ref|XP_003703800.1| PREDICTED: endoribonuclease Dicer-like [Megachile rotundata]
Length = 1441
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+L F G++N ++ATDV++EGIDI +C LVI+F+ P R+Y+QSK
Sbjct: 437 ALLRFKNGLSNCIIATDVIDEGIDIPTCTLVIRFNLPMDVRAYIQSKG 484
>gi|429137921|gb|AFZ74931.1| dicer 2 [Aphis glycines]
Length = 1628
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
FN I N+L+ ++VLEEG+DIQ+CN VI++D P++ SYVQSK
Sbjct: 444 FNDNIINVLITSEVLEEGVDIQTCNYVIRYDSPKNFPSYVQSKG 487
>gi|242809985|ref|XP_002485488.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC
10500]
gi|218716113|gb|EED15535.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC
10500]
Length = 1420
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 34/41 (82%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
G TN+L+AT+VLEEGID+ +CN+VI FDPP+ RS++Q +
Sbjct: 458 GKTNVLIATNVLEEGIDVPACNIVICFDPPKDLRSFIQRRG 498
>gi|391328911|ref|XP_003738926.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1347
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 36/44 (81%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F + N+L+AT V+EEG+DI +CNLV+++DPP++ RSYVQS+
Sbjct: 416 FRKRQLNLLIATSVIEEGVDIPACNLVLRYDPPKNMRSYVQSRG 459
>gi|380492403|emb|CCF34628.1| RNase3 domain-containing protein [Colletotrichum higginsianum]
Length = 1362
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 7/77 (9%)
Query: 2 DVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVR---- 57
D+Q++ F G TN+L+AT VLEEGID+ +CNLV FD P + +S++Q + +R
Sbjct: 399 DLQSLHQFRTGKTNLLIATSVLEEGIDVPACNLVFCFDNPPNLKSFIQRRGRARMRESKL 458
Query: 58 ---HKAEQILSQYPKSE 71
H +E I ++ E
Sbjct: 459 LMLHSSESIPKEWEAME 475
>gi|170049284|ref|XP_001855187.1| endoribonuclease Dicer [Culex quinquefasciatus]
gi|167871117|gb|EDS34500.1| endoribonuclease Dicer [Culex quinquefasciatus]
Length = 1665
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%)
Query: 2 DVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAE 61
D + + F + TN++V T+VLEEGID+Q CN VIKFD P+ SY QSK ++
Sbjct: 441 DRRVLERFKKNETNVIVTTNVLEEGIDLQMCNSVIKFDYPETFASYEQSKGRARMKDSTY 500
Query: 62 QILSQYPKSERYLQ 75
++ K E++L+
Sbjct: 501 TVMLDSDKREKFLK 514
>gi|391348645|ref|XP_003748555.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1461
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ M +F G N++ AT V+EEG+D+ +CNL+I+FDPP RSY QSK
Sbjct: 426 KVMKNFRNGEYNLMFATSVIEEGMDVPACNLIIRFDPPMDVRSYTQSKG 474
>gi|359475987|ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
Length = 1648
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 23/97 (23%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+T+ SF G N+L ATDV+EEGI + +C+ VI+FD P+ RSYVQS R +A Q
Sbjct: 465 ETLESFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQS------RGRARQS 518
Query: 64 LSQYPKSERYLQYNSPKINRLLQLLRRYNPDQRTIIF 100
SQ+ + +L R N +QR +F
Sbjct: 519 DSQF-----------------IIMLERGNTEQRDQLF 538
>gi|296081735|emb|CBI20740.3| unnamed protein product [Vitis vinifera]
Length = 1688
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 23/97 (23%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+T+ SF G N+L ATDV+EEGI + +C+ VI+FD P+ RSYVQS R +A Q
Sbjct: 473 ETLESFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQS------RGRARQS 526
Query: 64 LSQYPKSERYLQYNSPKINRLLQLLRRYNPDQRTIIF 100
SQ+ + +L R N +QR +F
Sbjct: 527 DSQF-----------------IIMLERGNTEQRDQLF 546
>gi|222619725|gb|EEE55857.1| hypothetical protein OsJ_04485 [Oryza sativa Japonica Group]
Length = 1839
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/67 (49%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKA 60
M T+ SF G N+L TDV EEGI + C+ VI+FD P+ TRSYVQS R +A
Sbjct: 409 MQKDTLDSFRSGKVNLLFTTDVAEEGIHVPECSCVIRFDLPRTTRSYVQS------RGRA 462
Query: 61 EQILSQY 67
Q SQY
Sbjct: 463 RQEDSQY 469
>gi|218189575|gb|EEC72002.1| hypothetical protein OsI_04862 [Oryza sativa Indica Group]
Length = 1858
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/67 (49%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKA 60
M T+ SF G N+L TDV EEGI + C+ VI+FD P+ TRSYVQS R +A
Sbjct: 409 MQKDTLDSFRSGKVNLLFTTDVAEEGIHVPECSCVIRFDLPRTTRSYVQS------RGRA 462
Query: 61 EQILSQY 67
Q SQY
Sbjct: 463 RQEDSQY 469
>gi|212537171|ref|XP_002148741.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
gi|210068483|gb|EEA22574.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
Length = 1431
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/41 (60%), Positives = 34/41 (82%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
G TNIL+AT+VLEEGID+ +CN+VI FDPP+ RS++Q +
Sbjct: 461 GKTNILIATNVLEEGIDVPACNMVICFDPPKDLRSFIQRRG 501
>gi|255547506|ref|XP_002514810.1| ATP binding protein, putative [Ricinus communis]
gi|223545861|gb|EEF47364.1| ATP binding protein, putative [Ricinus communis]
Length = 1388
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 33/44 (75%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G NI+VAT +LEEG+D+QSCNLV++FDP S++QS+
Sbjct: 432 FREGKVNIIVATSILEEGLDVQSCNLVVRFDPSTTVSSFIQSRG 475
>gi|241061228|ref|XP_002408100.1| dicer-1, putative [Ixodes scapularis]
gi|215492369|gb|EEC02010.1| dicer-1, putative [Ixodes scapularis]
Length = 2050
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYPKSERYL 74
N+LVAT V+EEGI++ CNLV++FDPP++ R+Y+ SK H +L +S R+L
Sbjct: 624 NLLVATSVVEEGIEVPRCNLVVRFDPPENLRAYMLSKGKAKAAHSRYFVLVPREESARFL 683
Query: 75 Q 75
+
Sbjct: 684 E 684
>gi|336380656|gb|EGO21809.1| hypothetical protein SERLADRAFT_441040 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1460
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F +G N+LVAT V EEG+ +C++V++FDP QH YVQS+ + I++Q
Sbjct: 450 FRQGKLNLLVATSVAEEGLHFPACDIVVRFDPIQHMVGYVQSRGRARTKTSTFVIMAQKD 509
Query: 69 KSERYLQYNS-----PKINRLLQ 86
S ++YN+ P++ R+ Q
Sbjct: 510 HSAHLVRYNAFLKSEPELKRVYQ 532
>gi|328909265|gb|AEB61300.1| endoribonuclease dicer-like protein, partial [Equus caballus]
Length = 145
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ ++ F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 12 EVLMKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 60
>gi|336367926|gb|EGN96270.1| hypothetical protein SERLA73DRAFT_112480 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1460
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F +G N+LVAT V EEG+ +C++V++FDP QH YVQS+ + I++Q
Sbjct: 450 FRQGKLNLLVATSVAEEGLHFPACDIVVRFDPIQHMVGYVQSRGRARTKTSTFVIMAQKD 509
Query: 69 KSERYLQYNS-----PKINRLLQ 86
S ++YN+ P++ R+ Q
Sbjct: 510 HSAHLVRYNAFLKSEPELKRVYQ 532
>gi|322700444|gb|EFY92199.1| Dicer-like protein 2 [Metarhizium acridum CQMa 102]
Length = 1441
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQY 67
SF G NIL+AT VLEEGID+ +CN+VI FD P +S+VQ + ++ +LS+Y
Sbjct: 503 SFRSGKINILIATSVLEEGIDVPACNMVICFDHPATPKSFVQRRGRARMKESKLILLSEY 562
Query: 68 PKS 70
S
Sbjct: 563 SSS 565
>gi|328696732|ref|XP_001945890.2| PREDICTED: endoribonuclease dcr-1-like isoform 1 [Acyrthosiphon
pisum]
Length = 1691
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 35/44 (79%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
FN + N+L+ ++VLEEG+DIQ+CN VI++D P++ SY+QSK
Sbjct: 444 FNDNVINVLITSEVLEEGVDIQTCNYVIRYDSPKNFPSYIQSKG 487
>gi|328696734|ref|XP_003240110.1| PREDICTED: endoribonuclease dcr-1-like isoform 3 [Acyrthosiphon
pisum]
Length = 1630
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 35/44 (79%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
FN + N+L+ ++VLEEG+DIQ+CN VI++D P++ SY+QSK
Sbjct: 444 FNDNVINVLITSEVLEEGVDIQTCNYVIRYDSPKNFPSYIQSKG 487
>gi|328696730|ref|XP_003240109.1| PREDICTED: endoribonuclease dcr-1-like isoform 2 [Acyrthosiphon
pisum]
Length = 1648
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 35/44 (79%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
FN + N+L+ ++VLEEG+DIQ+CN VI++D P++ SY+QSK
Sbjct: 444 FNDNVINVLITSEVLEEGVDIQTCNYVIRYDSPKNFPSYIQSKG 487
>gi|115441737|ref|NP_001045148.1| Os01g0909200 [Oryza sativa Japonica Group]
gi|75321191|sp|Q5N870.1|DCL3A_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 3a; AltName:
Full=Dicer-like protein 3a; Short=OsDCL3a
gi|56785369|dbj|BAD82327.1| putative Endoribonuclease Dicer homolog [Oryza sativa Japonica
Group]
gi|113534679|dbj|BAF07062.1| Os01g0909200 [Oryza sativa Japonica Group]
Length = 1651
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/67 (49%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKA 60
M T+ SF G N+L TDV EEGI + C+ VI+FD P+ TRSYVQS R +A
Sbjct: 463 MQKDTLDSFRSGKVNLLFTTDVAEEGIHVPECSCVIRFDLPRTTRSYVQS------RGRA 516
Query: 61 EQILSQY 67
Q SQY
Sbjct: 517 RQEDSQY 523
>gi|347835506|emb|CCD50078.1| similar to dicer-like protein 2 [Botryotinia fuckeliana]
Length = 1378
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ SF RG +IL+AT+VLEEGID+ +CNLVI F P + +S+VQ +
Sbjct: 413 TLSSFKRGKIDILIATNVLEEGIDVPACNLVICFSKPANLKSFVQRRG 460
>gi|350399948|ref|XP_003485689.1| PREDICTED: endoribonuclease Dicer-like [Bombus impatiens]
Length = 1490
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ +L F G+ N +VATDV++EGID+ C+L+I++D P R+Y+QSK
Sbjct: 434 EVLLRFRNGLLNCIVATDVIDEGIDVPKCSLIIRYDLPMDVRTYIQSKG 482
>gi|171689324|ref|XP_001909602.1| hypothetical protein [Podospora anserina S mat+]
gi|170944624|emb|CAP70735.1| unnamed protein product [Podospora anserina S mat+]
Length = 1406
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 2 DVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
D++++ F +G N+LVAT VLEEGID+ CNLVI FD P + +S++Q +
Sbjct: 414 DIESLHRFRKGKVNLLVATSVLEEGIDVPVCNLVICFDKPSNLKSFIQRRG 464
>gi|443725259|gb|ELU12939.1| hypothetical protein CAPTEDRAFT_223153 [Capitella teleta]
Length = 1651
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 32/44 (72%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F + N+LV+T VLEEGID CNLV+KFD P RSYVQSKA
Sbjct: 488 FRQKDLNLLVSTSVLEEGIDFPKCNLVVKFDAPTSYRSYVQSKA 531
>gi|356533095|ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
Length = 1414
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 34/44 (77%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G+ NI+VAT +LEEG+D++SCNLVI+FDP S++QS+
Sbjct: 447 FRMGLVNIIVATSILEEGLDVESCNLVIRFDPCHTVCSFIQSRG 490
>gi|390598592|gb|EIN07990.1| hypothetical protein PUNSTDRAFT_144457 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1435
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQY 67
+F RG N+LVAT V EEG+D +C+LVI+FDP QH Y+QS+ RH +
Sbjct: 440 AFRRGEINLLVATSVAEEGLDFPACDLVIRFDPLQHMVGYLQSRG--RARHHTSTFVIMV 497
Query: 68 PK-SERYL 74
P+ SE+++
Sbjct: 498 PRGSEQHI 505
>gi|358380675|gb|EHK18352.1| hypothetical protein TRIVIDRAFT_47151 [Trichoderma virens Gv29-8]
Length = 1386
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 2 DVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
D + +L+F G N+L+AT VLEEGID+ +CNLVI FD P ++S++Q +
Sbjct: 435 DYKDLLNFRHGKINLLIATSVLEEGIDVPACNLVICFDTPTTSKSFIQRRG 485
>gi|322707759|gb|EFY99337.1| Dicer-like protein 2 [Metarhizium anisopliae ARSEF 23]
Length = 1442
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 41/63 (65%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQY 67
SF G NIL+AT VLEEGID+ +CN+VI FD PQ +S++Q + ++ +LS++
Sbjct: 503 SFRSGKINILIATSVLEEGIDVPACNMVICFDHPQTPKSFLQRRGRARMKESKLILLSEH 562
Query: 68 PKS 70
S
Sbjct: 563 SSS 565
>gi|395330301|gb|EJF62685.1| hypothetical protein DICSQDRAFT_104190 [Dichomitus squalens
LYAD-421 SS1]
Length = 1453
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 9/79 (11%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQIL-----SQYPK 69
N+LVAT V EEG+D +C+LVI+FDP QH Y+QS+ RHK + +
Sbjct: 444 NLLVATSVAEEGLDFPACDLVIRFDPVQHMVGYLQSRG--RARHKTSTFIIMVQEGSQAQ 501
Query: 70 SERYLQY--NSPKINRLLQ 86
+ERYL++ + P + ++ Q
Sbjct: 502 AERYLEFLRSEPHLKKVYQ 520
>gi|302318908|ref|NP_001180543.1| dicer-2 [Bombyx mori]
gi|300669733|dbj|BAJ11655.1| DICER-2 [Bombyx mori]
Length = 1677
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ +L FN G N L++T V+EEG+DI C LV+++D P RSY+QSK
Sbjct: 460 KAILGFNNGDLNCLISTSVIEEGLDIPQCALVVRYDAPTEYRSYIQSKG 508
>gi|47210542|emb|CAF93934.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1479
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
Q + F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 549 QVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 597
>gi|242059623|ref|XP_002458957.1| hypothetical protein SORBIDRAFT_03g043355 [Sorghum bicolor]
gi|241930932|gb|EES04077.1| hypothetical protein SORBIDRAFT_03g043355 [Sorghum bicolor]
Length = 1651
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKA 60
M T+ SF G N+L TDV EEGI I C+ VI+FD P+ TRSYVQS R +A
Sbjct: 463 MQKDTLDSFRSGKVNLLFTTDVAEEGIHIPDCSCVIRFDLPRTTRSYVQS------RGRA 516
Query: 61 EQILSQY 67
Q SQY
Sbjct: 517 RQRDSQY 523
>gi|371496114|gb|AEX31636.1| Dicer 2 [Aedes albopictus]
Length = 821
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F R TN++V T+VLEEGID+Q CN VIK+D PQ SY QSK ++ ++
Sbjct: 445 FKRNETNVIVTTNVLEEGIDLQMCNTVIKYDHPQTFASYQQSKGRARMKDSQYMVMLNNE 504
Query: 69 KSERYLQ 75
+ +++L+
Sbjct: 505 ERQKFLE 511
>gi|356532427|ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
Length = 1421
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRH 58
F G+ NI+VAT +LEEG+D+Q CNLVI+FDP S++QS+ +R+
Sbjct: 480 FRMGLVNIIVATSILEEGLDVQRCNLVIRFDPCPTVCSFIQSRGRARMRN 529
>gi|371486408|gb|AEX31249.1| Dicer 2 [Aedes albopictus]
Length = 1625
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F R TN++V T+VLEEGID+Q CN VIK+D PQ SY QSK ++ ++
Sbjct: 445 FKRNETNVIVTTNVLEEGIDLQMCNTVIKYDHPQTFASYQQSKGRARMKDSQYMVMLNNE 504
Query: 69 KSERYLQ 75
+ +++L+
Sbjct: 505 ERQKFLE 511
>gi|358397707|gb|EHK47075.1| hypothetical protein TRIATDRAFT_291296 [Trichoderma atroviride IMI
206040]
Length = 1507
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 2 DVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
D++ + +F G N+L+AT VLEEGID+ +CNLVI FD P+ ++S++Q +
Sbjct: 544 DLKALQNFRSGKINLLIATAVLEEGIDVPACNLVICFDVPKTSKSFIQRRG 594
>gi|346716367|ref|NP_001231198.1| endoribonuclease Dicer [Cricetulus griseus]
gi|257051055|sp|A0MQH0.3|DICER_CRIGR RecName: Full=Endoribonuclease Dicer
gi|116831677|gb|ABK28790.1| DICER [Cricetulus griseus]
Length = 1917
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT V+EEG+DI CNLV++FD P RSYVQSK
Sbjct: 503 EVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|344248388|gb|EGW04492.1| Endoribonuclease Dicer [Cricetulus griseus]
Length = 1907
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT V+EEG+DI CNLV++FD P RSYVQSK
Sbjct: 493 EVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 541
>gi|257051057|sp|Q8R418.3|DICER_MOUSE RecName: Full=Endoribonuclease Dicer; AltName:
Full=Double-strand-specific ribonuclease mDCR-1
Length = 1916
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT V+EEG+DI CNLV++FD P RSYVQSK
Sbjct: 503 EVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|117168271|ref|NP_683750.2| endoribonuclease Dicer [Mus musculus]
gi|225000568|gb|AAI72621.1| Dicer1, Dcr-1 homolog (Drosophila) [synthetic construct]
Length = 1906
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT V+EEG+DI CNLV++FD P RSYVQSK
Sbjct: 493 EVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 541
>gi|109478606|ref|XP_001068155.1| PREDICTED: endoribonuclease Dicer [Rattus norvegicus]
gi|109479876|ref|XP_001069041.1| PREDICTED: endoribonuclease Dicer [Rattus norvegicus]
gi|149025439|gb|EDL81806.1| rCG20888 [Rattus norvegicus]
Length = 1918
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT V+EEG+DI CNLV++FD P RSYVQSK
Sbjct: 503 EVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|148686841|gb|EDL18788.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_b [Mus musculus]
Length = 1908
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT V+EEG+DI CNLV++FD P RSYVQSK
Sbjct: 495 EVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 543
>gi|22830885|dbj|BAC15765.1| double-strand-specific ribonuclease MDCR [Mus musculus]
Length = 1906
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT V+EEG+DI CNLV++FD P RSYVQSK
Sbjct: 493 EVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 541
>gi|380026731|ref|XP_003697097.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like [Apis
florea]
Length = 1362
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 6/59 (10%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQY 67
F G++N +VATD+L+EG++I C+L+I++D P R+Y+QSK +A + SQY
Sbjct: 357 FKNGLSNCIVATDILDEGVNIPKCSLIIRYDLPMDVRTYIQSKG------RARHVHSQY 409
>gi|148686840|gb|EDL18787.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_a [Mus musculus]
Length = 1916
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT V+EEG+DI CNLV++FD P RSYVQSK
Sbjct: 503 EVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|20385913|gb|AAM21495.1|AF430845_1 dicer-like protein [Mus musculus]
Length = 1917
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT V+EEG+DI CNLV++FD P RSYVQSK
Sbjct: 504 EVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 552
>gi|19072786|gb|AAL84638.1|AF484524_1 endoribonuclease Dicer [Mus musculus x Mus spretus]
Length = 1539
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT V+EEG+DI CNLV++FD P RSYVQSK
Sbjct: 487 EVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 535
>gi|396464039|ref|XP_003836630.1| similar to dicer-like protein 2 [Leptosphaeria maculans JN3]
gi|312213183|emb|CBX93265.1| similar to dicer-like protein 2 [Leptosphaeria maculans JN3]
Length = 1393
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G TN+++AT VLEEGIDI SCNLV+ F+ P++ +S+VQ +
Sbjct: 429 TLDDFRAGRTNLMLATSVLEEGIDISSCNLVVDFERPKNLKSFVQRRG 476
>gi|402073770|gb|EJT69322.1| dicer-like protein 2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1538
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQY 67
+F G N+LVAT VLEEGID+ CNLV+ FD P + +S++Q + R ++ Q+
Sbjct: 501 NFRSGRINLLVATSVLEEGIDVPVCNLVVCFDRPANLKSFIQRRG--RARMRSSQLHLLL 558
Query: 68 PKSERYLQYNSPKINRLLQLLRRYNPDQRTI 98
+ ER + ++ + + ++ RRY + R +
Sbjct: 559 EEGERLVAHDWEALEK--EMKRRYEDEMREL 587
>gi|336468520|gb|EGO56683.1| hypothetical protein NEUTE1DRAFT_123167 [Neurospora tetrasperma
FGSC 2508]
Length = 1529
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 2 DVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAE 61
D+ ++ F RG N+LVAT VLEEGID+ CNLVI FD P + +S++Q +
Sbjct: 463 DMTSLEGFRRGRFNLLVATSVLEEGIDVPICNLVICFDEPSNIKSFIQRRGRAREVSSTL 522
Query: 62 QILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQR 96
++ Q E + +++ + RL++ RY + R
Sbjct: 523 YLMVQNASGESAMDWHN--LERLMK--ERYEDEMR 553
>gi|350289218|gb|EGZ70443.1| P-loop containing nucleoside triphosphate hydrolase protein
[Neurospora tetrasperma FGSC 2509]
Length = 1547
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 2 DVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAE 61
D+ ++ F RG N+LVAT VLEEGID+ CNLVI FD P + +S++Q +
Sbjct: 487 DMTSLEGFRRGRFNLLVATSVLEEGIDVPICNLVICFDEPSNIKSFIQRRGRAREVSSTL 546
Query: 62 QILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQR 96
++ Q E + +++ + RL++ RY + R
Sbjct: 547 YLMVQNASGESAMDWHN--LERLMK--ERYEDEMR 577
>gi|307198394|gb|EFN79336.1| Endoribonuclease dcr-1 [Harpegnathos saltator]
Length = 1479
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+ M F +G++N +VATDV++EGID+ C LV+++D P R+YVQSK RH
Sbjct: 474 EVMQRFRKGLSNCIVATDVVDEGIDVPLCALVVRYDLPTDYRAYVQSKG--RARHGTSHY 531
Query: 64 LSQYPK-SERYL-QYNSPKINRL 84
P+ E +L +Y KI L
Sbjct: 532 TVLVPRDDETFLSRYKDFKITEL 554
>gi|189441606|gb|AAI67373.1| dicer1 protein [Xenopus (Silurana) tropicalis]
Length = 811
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 494 EVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPSEYRSYVQSKG 542
>gi|403274211|ref|XP_003928879.1| PREDICTED: endoribonuclease Dicer isoform 1 [Saimiri boliviensis
boliviensis]
gi|403274213|ref|XP_003928880.1| PREDICTED: endoribonuclease Dicer isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1922
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 513 TNLLIATSIVEEGVDIPKCNLVVRFDLPAEYRSYVQSKG 551
>gi|410962933|ref|XP_003988023.1| PREDICTED: endoribonuclease Dicer [Felis catus]
Length = 1893
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 514 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 552
>gi|126290301|ref|XP_001367933.1| PREDICTED: endoribonuclease Dicer-like [Monodelphis domestica]
Length = 1923
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 513 TNLLIATSIVEEGVDIPKCNLVVRFDLPMEYRSYVQSKG 551
>gi|410928196|ref|XP_003977487.1| PREDICTED: endoribonuclease Dicer-like [Takifugu rubripes]
Length = 1883
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 492 EVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 540
>gi|254281220|ref|NP_001123390.2| endoribonuclease Dicer [Xenopus (Silurana) tropicalis]
gi|238064965|sp|B3DLA6.2|DICER_XENTR RecName: Full=Endoribonuclease Dicer
gi|169261418|gb|ACA52289.1| endoribonuclease [Xenopus (Silurana) tropicalis]
Length = 1893
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 494 EVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPSEYRSYVQSKG 542
>gi|432096208|gb|ELK27069.1| Endoribonuclease Dicer [Myotis davidii]
Length = 1970
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 503 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 541
>gi|432936630|ref|XP_004082201.1| PREDICTED: endoribonuclease Dicer-like [Oryzias latipes]
Length = 1890
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 493 EVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 541
>gi|431839251|gb|ELK01178.1| Endoribonuclease Dicer [Pteropus alecto]
Length = 1921
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 503 EVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|351701180|gb|EHB04099.1| Endoribonuclease Dicer [Heterocephalus glaber]
Length = 1935
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 513 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|281427125|ref|NP_001163918.1| dicer 1, ribonuclease type III [Xenopus laevis]
gi|261826170|gb|ACX94846.1| truncated double-stranded RNA-specific endoribonuclease type III
[Xenopus laevis]
Length = 1795
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 505 TNLLIATSIVEEGVDIPKCNLVVRFDLPSEYRSYVQSKG 543
>gi|348554455|ref|XP_003463041.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like [Cavia
porcellus]
Length = 1929
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 513 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|344274190|ref|XP_003408901.1| PREDICTED: endoribonuclease Dicer [Loxodonta africana]
Length = 1920
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 513 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|21665773|emb|CAB38857.2| hypothetical helicase K12H4.8-like protein [Homo sapiens]
Length = 1912
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 503 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 541
>gi|402877099|ref|XP_003902280.1| PREDICTED: endoribonuclease Dicer isoform 1 [Papio anubis]
gi|402877101|ref|XP_003902281.1| PREDICTED: endoribonuclease Dicer isoform 2 [Papio anubis]
gi|402877103|ref|XP_003902282.1| PREDICTED: endoribonuclease Dicer isoform 3 [Papio anubis]
Length = 1920
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 513 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|383872414|ref|NP_001244801.1| endoribonuclease Dicer [Macaca mulatta]
gi|380811118|gb|AFE77434.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
gi|380811120|gb|AFE77435.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
gi|380811122|gb|AFE77436.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
gi|380811124|gb|AFE77437.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
gi|383417045|gb|AFH31736.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
Length = 1920
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 513 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|355778829|gb|EHH63865.1| hypothetical protein EGM_16920 [Macaca fascicularis]
Length = 1910
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 503 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 541
>gi|308237838|ref|NP_001184123.1| endoribonuclease Dicer [Sus scrofa]
gi|307715909|gb|ADN88174.1| dicer [Sus scrofa]
Length = 1915
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 504 EVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 552
>gi|194225335|ref|XP_001496219.2| PREDICTED: endoribonuclease Dicer [Equus caballus]
Length = 1785
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 367 EVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 415
>gi|426377909|ref|XP_004055696.1| PREDICTED: endoribonuclease Dicer isoform 1 [Gorilla gorilla
gorilla]
gi|426377911|ref|XP_004055697.1| PREDICTED: endoribonuclease Dicer isoform 2 [Gorilla gorilla
gorilla]
gi|426377913|ref|XP_004055698.1| PREDICTED: endoribonuclease Dicer isoform 3 [Gorilla gorilla
gorilla]
Length = 1922
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 513 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|29294649|ref|NP_085124.2| endoribonuclease Dicer isoform 1 [Homo sapiens]
gi|29294651|ref|NP_803187.1| endoribonuclease Dicer isoform 1 [Homo sapiens]
gi|404312696|ref|NP_001258211.1| endoribonuclease Dicer isoform 1 [Homo sapiens]
gi|257051056|sp|Q9UPY3.3|DICER_HUMAN RecName: Full=Endoribonuclease Dicer; AltName: Full=Helicase with
RNase motif; Short=Helicase MOI
gi|20521696|dbj|BAA76772.2| KIAA0928 protein [Homo sapiens]
gi|119602002|gb|EAW81596.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_b [Homo sapiens]
gi|152012889|gb|AAI50288.1| Dicer 1, ribonuclease type III [Homo sapiens]
gi|307685563|dbj|BAJ20712.1| dicer 1, ribonuclease type III [synthetic construct]
Length = 1922
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 513 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|297695799|ref|XP_002825114.1| PREDICTED: endoribonuclease Dicer isoform 1 [Pongo abelii]
gi|297695801|ref|XP_002825115.1| PREDICTED: endoribonuclease Dicer isoform 2 [Pongo abelii]
gi|297695803|ref|XP_002825116.1| PREDICTED: endoribonuclease Dicer isoform 3 [Pongo abelii]
Length = 1922
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 503 EVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|296215835|ref|XP_002754306.1| PREDICTED: endoribonuclease Dicer isoform 3 [Callithrix jacchus]
Length = 1922
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 513 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|119602001|gb|EAW81595.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_a [Homo sapiens]
Length = 1923
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 513 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|114654619|ref|XP_001154369.1| PREDICTED: endoribonuclease Dicer isoform 6 [Pan troglodytes]
gi|410048689|ref|XP_003952618.1| PREDICTED: endoribonuclease Dicer [Pan troglodytes]
gi|410219112|gb|JAA06775.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410256210|gb|JAA16072.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410256212|gb|JAA16073.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410306234|gb|JAA31717.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410306236|gb|JAA31718.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410351815|gb|JAA42511.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410351817|gb|JAA42512.1| dicer 1, ribonuclease type III [Pan troglodytes]
Length = 1922
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 513 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|440907259|gb|ELR57423.1| Endoribonuclease Dicer [Bos grunniens mutus]
Length = 1922
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 503 EVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|426248555|ref|XP_004018028.1| PREDICTED: endoribonuclease Dicer [Ovis aries]
Length = 1922
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 503 EVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|345803797|ref|XP_868526.2| PREDICTED: endoribonuclease Dicer isoform 4 [Canis lupus
familiaris]
Length = 1923
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 513 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|397525875|ref|XP_003832878.1| PREDICTED: endoribonuclease Dicer isoform 1 [Pan paniscus]
gi|397525877|ref|XP_003832879.1| PREDICTED: endoribonuclease Dicer isoform 2 [Pan paniscus]
Length = 1922
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 513 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|332223646|ref|XP_003260983.1| PREDICTED: endoribonuclease Dicer isoform 1 [Nomascus leucogenys]
gi|332223648|ref|XP_003260984.1| PREDICTED: endoribonuclease Dicer isoform 2 [Nomascus leucogenys]
gi|441666339|ref|XP_004091884.1| PREDICTED: endoribonuclease Dicer [Nomascus leucogenys]
Length = 1922
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 513 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|326920976|ref|XP_003206741.1| PREDICTED: endoribonuclease Dicer-like [Meleagris gallopavo]
Length = 1921
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 503 EVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|395504573|ref|XP_003756622.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer [Sarcophilus
harrisii]
Length = 1924
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 514 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 552
>gi|307133775|ref|NP_001182502.1| endoribonuclease Dicer isoform 2 [Homo sapiens]
gi|300517087|gb|ADK25182.1| t-Dicer [Homo sapiens]
Length = 1829
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 503 EVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|281339672|gb|EFB15256.1| hypothetical protein PANDA_009266 [Ailuropoda melanoleuca]
Length = 1917
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 513 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|94957752|ref|NP_001035555.1| endoribonuclease Dicer [Gallus gallus]
gi|257051054|sp|Q25BN1.3|DICER_CHICK RecName: Full=Endoribonuclease Dicer
gi|90074858|dbj|BAE87103.1| Dicer protein [Gallus gallus]
Length = 1921
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 503 EVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|449280710|gb|EMC87946.1| Endoribonuclease Dicer [Columba livia]
Length = 1922
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 503 EVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|42733596|ref|NP_976235.1| endoribonuclease Dicer [Bos taurus]
gi|257051053|sp|Q6TUI4.3|DICER_BOVIN RecName: Full=Endoribonuclease Dicer
gi|38679195|gb|AAR26432.1| dicer [Bos taurus]
Length = 1923
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 513 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|296475171|tpg|DAA17286.1| TPA: endoribonuclease Dicer [Bos taurus]
Length = 1922
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 513 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|154300125|ref|XP_001550479.1| hypothetical protein BC1G_10438 [Botryotinia fuckeliana B05.10]
Length = 1398
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ SF RG +IL+AT+VLEEGID+ +CNLVI F P + +S+VQ +
Sbjct: 494 TLSSFKRGKIDILIATNVLEEGIDVPACNLVICFSKPANLKSFVQRRG 541
>gi|387015528|gb|AFJ49883.1| Endoribonuclease Dicer-like isoform 1 [Crotalus adamanteus]
Length = 1917
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 503 EVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|340712553|ref|XP_003394821.1| PREDICTED: endoribonuclease Dicer-like [Bombus terrestris]
Length = 1488
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ +L F G N +VATDV++EGID+ C+L+I++D P R+Y+QSK
Sbjct: 434 EVLLRFRNGSLNCIVATDVIDEGIDVPKCSLIIRYDLPMDVRTYIQSKG 482
>gi|301770225|ref|XP_002920522.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like
[Ailuropoda melanoleuca]
Length = 1931
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 503 EVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|327259080|ref|XP_003214366.1| PREDICTED: endoribonuclease Dicer-like isoform 2 [Anolis
carolinensis]
Length = 1915
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 493 EVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 541
>gi|327259078|ref|XP_003214365.1| PREDICTED: endoribonuclease Dicer-like isoform 1 [Anolis
carolinensis]
Length = 1918
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 503 EVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|449442659|ref|XP_004139098.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Cucumis sativus]
Length = 1393
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G NI+VAT +LEEG+D+QSCNLVI+FDP S++QS+
Sbjct: 443 FRCGKVNIIVATSILEEGLDVQSCNLVIRFDPSSTVCSFIQSRG 486
>gi|395827764|ref|XP_003787065.1| PREDICTED: endoribonuclease Dicer isoform 1 [Otolemur garnettii]
gi|395827766|ref|XP_003787066.1| PREDICTED: endoribonuclease Dicer isoform 2 [Otolemur garnettii]
Length = 1921
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 508 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 546
>gi|254281274|ref|NP_001156875.1| endoribonuclease Dicer [Taeniopygia guttata]
Length = 1921
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 503 EVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|5019620|dbj|BAA78691.1| helicase-MOI [Homo sapiens]
Length = 1924
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 515 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 553
>gi|149636857|ref|XP_001510982.1| PREDICTED: endoribonuclease Dicer-like [Ornithorhynchus anatinus]
Length = 1921
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 513 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551
>gi|348544424|ref|XP_003459681.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like
[Oreochromis niloticus]
Length = 1917
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 504 EVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 552
>gi|302412697|ref|XP_003004181.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261356757|gb|EEY19185.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 1240
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 37/51 (72%)
Query: 2 DVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + +L F G N+L+AT VLEEGID+ +CNLVI FD P++ +++VQ +
Sbjct: 283 ETEPLLQFRSGHLNLLIATSVLEEGIDVPACNLVICFDEPENLKAFVQRRG 333
>gi|37360146|dbj|BAC98051.1| mKIAA0928 protein [Mus musculus]
Length = 1475
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT V+EEG+DI CNLV++FD P RSYVQSK
Sbjct: 62 EVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 110
>gi|440655799|gb|AGC22548.1| dicer [Ctenopharyngodon idella]
Length = 1881
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 489 EVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 537
>gi|238814324|ref|NP_001154925.1| endoribonuclease Dicer [Danio rerio]
gi|229485378|sp|Q6TV19.2|DICER_DANRE RecName: Full=Endoribonuclease Dicer
Length = 1865
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F TN+L+AT ++EEG+DI CNLV++FD P RSYVQSK
Sbjct: 489 EVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 537
>gi|195109134|ref|XP_001999145.1| GI24348 [Drosophila mojavensis]
gi|193915739|gb|EDW14606.1| GI24348 [Drosophila mojavensis]
Length = 2256
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLVI++DPP RSYVQ K
Sbjct: 562 NVLIGTSVLEEGIDVPKCNLVIRWDPPTTYRSYVQCKG 599
>gi|407917735|gb|EKG11039.1| Ribonuclease III [Macrophomina phaseolina MS6]
Length = 1216
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 37/49 (75%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
QT+ F G N++VAT VLEEGID+ +C++VI F+PP++ +S++Q +
Sbjct: 165 QTLDEFRDGKKNLIVATSVLEEGIDVSNCHIVICFEPPKNLKSFIQRRG 213
>gi|371486410|gb|AEX31250.1| Dicer 2 [Aedes albopictus]
Length = 1659
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F + TN++V T+VLEEGID+Q CN VIK+D PQ SY QSK ++ ++
Sbjct: 445 FKKNETNVIVTTNVLEEGIDLQMCNTVIKYDHPQTFASYQQSKGRARMKDSQYMVMLNNE 504
Query: 69 KSERYLQ 75
+ +++L+
Sbjct: 505 ERQKFLE 511
>gi|371486404|gb|AEX31247.1| Dicer 2 isoform A [Aedes albopictus]
gi|371486406|gb|AEX31248.1| Dicer 2 isoform B [Aedes albopictus]
Length = 1659
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F + TN++V T+VLEEGID+Q CN VIK+D PQ SY QSK ++ ++
Sbjct: 445 FKKNETNVIVTTNVLEEGIDLQMCNTVIKYDHPQTFASYQQSKGRARMKDSQYMVMLNNE 504
Query: 69 KSERYLQ 75
+ +++L+
Sbjct: 505 ERQKFLE 511
>gi|50399920|gb|AAT76308.1| putative RNA helicase/RNAseIII protein, C-terminus truncated [Oryza
sativa Japonica Group]
Length = 585
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
SF +G +I++AT +LEEG+D+ SCNLVI+FDP S++QS+
Sbjct: 452 SFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRG 496
>gi|195443910|ref|XP_002069632.1| GK11626 [Drosophila willistoni]
gi|194165717|gb|EDW80618.1| GK11626 [Drosophila willistoni]
Length = 2281
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 30/38 (78%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+AT VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 574 NLLIATSVLEEGIDVPKCNLVLRWDPPTTYRSYVQCKG 611
>gi|449489290|ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
3a-like [Cucumis sativus]
Length = 1639
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 23/97 (23%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+T+ F G N+L +TDV+EEG+ + +C+ V++FD P+ RSYVQS R +A Q
Sbjct: 458 ETLELFCHGKLNLLFSTDVVEEGLHVPNCSFVVRFDLPKTVRSYVQS------RGRARQN 511
Query: 64 LSQYPKSERYLQYNSPKINRLLQLLRRYNPDQRTIIF 100
SQY + LL R N QR ++F
Sbjct: 512 NSQY-----------------ILLLERGNLKQRALLF 531
>gi|388330447|gb|AFK29469.1| Dicer1 [Locusta migratoria]
Length = 2324
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+LV T VLEEGID+ CNLVI+FD P RSYVQSK
Sbjct: 737 NLLVGTSVLEEGIDVPKCNLVIRFDVPSMYRSYVQSKG 774
>gi|346972329|gb|EGY15781.1| hypothetical protein VDAG_06945 [Verticillium dahliae VdLs.17]
Length = 1187
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 37/51 (72%)
Query: 2 DVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + +L F G N+L+AT VLEEGID+ +CNLVI FD P++ +++VQ +
Sbjct: 283 ETEPLLQFRSGHLNLLIATSVLEEGIDVPACNLVICFDEPENLKAFVQRRG 333
>gi|392596196|gb|EIW85519.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 1520
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQY 67
SF G N+L+AT V EEG+D +C++V++FDP H YVQS+ + A I+ Q
Sbjct: 483 SFREGKLNLLIATSVAEEGLDFPACDIVVRFDPVHHMVGYVQSRGRARTKTSAFVIMVQA 542
Query: 68 ---PKSERY--LQYNSPKINRLLQ 86
ERY L + P++ ++ Q
Sbjct: 543 GYDTHRERYRNLSESEPELKKVYQ 566
>gi|357607884|gb|EHJ65725.1| dicer-2 [Danaus plexippus]
Length = 1871
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
Q +L F G N L+AT V+EEG+D+ C LV+++D P RSY+QSK
Sbjct: 648 QALLKFKNGDLNCLIATSVVEEGLDVPQCTLVLRYDVPLEYRSYIQSKG 696
>gi|41469332|gb|AAS07188.1| putative ribonuclease III, 5'-partial (with alternative splicing)
[Oryza sativa Japonica Group]
Length = 416
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
SF +G +I++AT +LEEG+D+ SCNLVI+FDP S++QS+
Sbjct: 59 SFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRG 103
>gi|296812107|ref|XP_002846391.1| dicer-like protein 2 [Arthroderma otae CBS 113480]
gi|238841647|gb|EEQ31309.1| dicer-like protein 2 [Arthroderma otae CBS 113480]
Length = 1437
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/41 (58%), Positives = 32/41 (78%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
G N+LVAT VLEEGID+ +C+LV+ FDPP+ RS+VQ +
Sbjct: 489 GKKNLLVATSVLEEGIDVSACDLVVCFDPPKQLRSFVQRRG 529
>gi|402595089|gb|EJW89015.1| hypothetical protein WUBG_00069 [Wuchereria bancrofti]
Length = 205
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+AT VLEEG+D++ CN+VI+FD P R+YVQSK
Sbjct: 129 NLLIATSVLEEGVDVRQCNVVIRFDRPTDYRAYVQSKG 166
>gi|345494561|ref|XP_001602524.2| PREDICTED: endoribonuclease Dicer [Nasonia vitripennis]
Length = 1450
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 11/83 (13%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA--------FTV 55
+ + F G+ N +VATDV++EG+DI SC L++++ P R+Y+QSK F +
Sbjct: 437 EVLTKFRNGVANCVVATDVVDEGVDIPSCTLIVRYYAPMDFRAYIQSKGRARHSTSHFII 496
Query: 56 VRHKAEQILSQY---PKSERYLQ 75
+ + +S+Y ++ER+L+
Sbjct: 497 LASSEDDYISRYRSFQQTERFLR 519
>gi|302502160|ref|XP_003013071.1| RNA helicase/RNAse III, putative [Arthroderma benhamiae CBS 112371]
gi|291176633|gb|EFE32431.1| RNA helicase/RNAse III, putative [Arthroderma benhamiae CBS 112371]
Length = 1490
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
++ G N+LVAT VLEEGID+ +C+LV+ FDPP+ RS+VQ +
Sbjct: 516 SIADLKSGKKNLLVATSVLEEGIDVSACDLVVCFDPPKQLRSFVQRRG 563
>gi|340516882|gb|EGR47129.1| predicted protein [Trichoderma reesei QM6a]
Length = 1376
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 2 DVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
D + + SF G N+L+AT VLEEGID+ +CNLVI FD P +S++Q +
Sbjct: 427 DYKDLQSFRSGKINLLIATSVLEEGIDVPACNLVICFDTPTTPKSFIQRRG 477
>gi|195572988|ref|XP_002104477.1| GD18428 [Drosophila simulans]
gi|194200404|gb|EDX13980.1| GD18428 [Drosophila simulans]
Length = 690
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 564 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 601
>gi|195143531|ref|XP_002012751.1| GL23778 [Drosophila persimilis]
gi|194101694|gb|EDW23737.1| GL23778 [Drosophila persimilis]
Length = 2278
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 574 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 611
>gi|195037032|ref|XP_001989969.1| GH18503 [Drosophila grimshawi]
gi|193894165|gb|EDV93031.1| GH18503 [Drosophila grimshawi]
Length = 2254
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 564 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 601
>gi|125773725|ref|XP_001358121.1| GA18437 [Drosophila pseudoobscura pseudoobscura]
gi|54637856|gb|EAL27258.1| GA18437 [Drosophila pseudoobscura pseudoobscura]
Length = 2280
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 576 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 613
>gi|121807816|sp|Q2VF18.1|DCL2_CRYPA RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease DCL-2; Includes: RecName:
Full=ATP-dependent helicase DCL-2
gi|77632776|gb|ABB00357.1| dicer-like protein 2 [Cryphonectria parasitica]
Length = 1451
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRH 58
Q + +F G N+LVAT VLEEGID+ +CNL+I FD P + R+++Q + +R
Sbjct: 484 QCLEAFREGRKNMLVATSVLEEGIDVPACNLIICFDKPNNLRAFIQRRGRARMRQ 538
>gi|449453061|ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Cucumis sativus]
Length = 1359
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 23/97 (23%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+T+ F G N+L +TDV+EEG+ + +C+ V++FD P+ RSYVQS R +A Q
Sbjct: 458 ETLELFCHGKLNLLFSTDVVEEGLHVPNCSFVVRFDLPKTVRSYVQS------RGRARQN 511
Query: 64 LSQYPKSERYLQYNSPKINRLLQLLRRYNPDQRTIIF 100
SQY + LL R N QR ++F
Sbjct: 512 NSQY-----------------ILLLERGNLKQRALLF 531
>gi|89114036|gb|ABD61609.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 507 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 544
>gi|194910778|ref|XP_001982226.1| GG12488 [Drosophila erecta]
gi|190656864|gb|EDV54096.1| GG12488 [Drosophila erecta]
Length = 2249
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 562 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 599
>gi|89114048|gb|ABD61615.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 507 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 544
>gi|89114042|gb|ABD61612.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 507 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 544
>gi|195502701|ref|XP_002098342.1| GE24009 [Drosophila yakuba]
gi|194184443|gb|EDW98054.1| GE24009 [Drosophila yakuba]
Length = 2250
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 562 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 599
>gi|89114032|gb|ABD61607.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 507 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 544
>gi|326475978|gb|EGD99987.1| hypothetical protein TESG_07315 [Trichophyton tonsurans CBS 112818]
Length = 1435
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/41 (58%), Positives = 32/41 (78%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
G N+LVAT VLEEGID+ +C+LV+ FDPP+ RS+VQ +
Sbjct: 489 GKKNLLVATSVLEEGIDVSACDLVVCFDPPKQLRSFVQRRG 529
>gi|302661784|ref|XP_003022555.1| RNA helicase/RNAse III, putative [Trichophyton verrucosum HKI 0517]
gi|291186507|gb|EFE41937.1| RNA helicase/RNAse III, putative [Trichophyton verrucosum HKI 0517]
Length = 1468
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/41 (58%), Positives = 32/41 (78%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
G N+LVAT VLEEGID+ +C+LV+ FDPP+ RS+VQ +
Sbjct: 501 GKKNLLVATSVLEEGIDVSACDLVVCFDPPKQLRSFVQRRG 541
>gi|17738129|ref|NP_524453.1| Dicer-1 [Drosophila melanogaster]
gi|51316117|sp|Q9VCU9.1|DCR1_DROME RecName: Full=Endoribonuclease Dcr-1; Short=Protein dicer-1
gi|7300916|gb|AAF56056.1| Dicer-1 [Drosophila melanogaster]
Length = 2249
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 564 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 601
>gi|89114034|gb|ABD61608.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 507 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 544
>gi|89114050|gb|ABD61616.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 507 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 544
>gi|89114044|gb|ABD61613.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 507 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 544
>gi|195331135|ref|XP_002032258.1| GM23619 [Drosophila sechellia]
gi|194121201|gb|EDW43244.1| GM23619 [Drosophila sechellia]
Length = 2249
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 564 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 601
>gi|89114040|gb|ABD61611.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 507 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 544
>gi|89114038|gb|ABD61610.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 507 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 544
>gi|89114024|gb|ABD61603.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 507 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 544
>gi|89114020|gb|ABD61601.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 507 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 544
>gi|89114030|gb|ABD61606.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 507 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 544
>gi|409082707|gb|EKM83065.1| hypothetical protein AGABI1DRAFT_125544 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1430
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+F +G N+L+AT V EEG+D +C+LV++FDP +H YVQS+
Sbjct: 434 AFRKGEVNVLIATSVAEEGLDFPACDLVVRFDPFRHMVGYVQSRG 478
>gi|41469334|gb|AAS07190.1| putative ribonuclease III, 5'-partial (with alternative splicing)
[Oryza sativa Japonica Group]
Length = 538
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
SF +G +I++AT +LEEG+D+ SCNLVI+FDP S++QS+
Sbjct: 59 SFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRG 103
>gi|89114046|gb|ABD61614.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 507 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 544
>gi|89114022|gb|ABD61602.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 507 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 544
>gi|89114026|gb|ABD61604.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 507 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 544
>gi|89114028|gb|ABD61605.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 507 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 544
>gi|195391256|ref|XP_002054279.1| GJ24359 [Drosophila virilis]
gi|194152365|gb|EDW67799.1| GJ24359 [Drosophila virilis]
Length = 2250
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 556 NVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 593
>gi|326485005|gb|EGE09015.1| dicer-like protein 2 [Trichophyton equinum CBS 127.97]
Length = 1417
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/41 (58%), Positives = 32/41 (78%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
G N+LVAT VLEEGID+ +C+LV+ FDPP+ RS+VQ +
Sbjct: 524 GKKNLLVATSVLEEGIDVSACDLVVCFDPPKQLRSFVQRRG 564
>gi|327303976|ref|XP_003236680.1| dicer-like protein 2 [Trichophyton rubrum CBS 118892]
gi|326462022|gb|EGD87475.1| dicer-like protein 2 [Trichophyton rubrum CBS 118892]
Length = 1460
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/41 (58%), Positives = 32/41 (78%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
G N+LVAT VLEEGID+ +C+LV+ FDPP+ RS+VQ +
Sbjct: 514 GKKNLLVATSVLEEGIDVSACDLVVCFDPPKQLRSFVQRRG 554
>gi|157167186|ref|XP_001652212.1| dicer-1 [Aedes aegypti]
gi|108877338|gb|EAT41563.1| AAEL006794-PA [Aedes aegypti]
Length = 1658
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 2 DVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
D + + F + TN++V T+VLEEGID+Q CN V+K+D PQ SY QSK
Sbjct: 438 DRRVLERFKKNETNVIVTTNVLEEGIDLQMCNTVVKYDHPQTFASYQQSKG 488
>gi|148829108|gb|ABR14013.1| Dicer-1 [Penaeus monodon]
Length = 2473
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 32/47 (68%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQS 50
+ + F NILV+T VLEEGID+ CNLV++FDPP RSYV S
Sbjct: 988 EVLRRFRHHECNILVSTRVLEEGIDVPQCNLVLRFDPPTDYRSYVHS 1034
>gi|299754132|ref|XP_002911949.1| type III restriction enzyme [Coprinopsis cinerea okayama7#130]
gi|298410618|gb|EFI28455.1| type III restriction enzyme [Coprinopsis cinerea okayama7#130]
Length = 1457
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
NIL+AT V EEG+D +C LVI+FDPP+H YVQS+
Sbjct: 452 NILIATSVAEEGLDFPACELVIRFDPPKHLVGYVQSRG 489
>gi|57236096|gb|AAW48725.1| dicer-2 [Aedes aegypti]
Length = 1658
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 2 DVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
D + + F + TN++V T+VLEEGID+Q CN V+K+D PQ SY QSK
Sbjct: 438 DRRVLERFKKNETNVIVTTNVLEEGIDLQMCNTVVKYDHPQTFASYQQSKG 488
>gi|195424855|gb|ACF96960.1| dicer-1 [Litopenaeus vannamei]
Length = 2473
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 32/47 (68%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQS 50
+ + F NILV+T VLEEGID+ CNLV++FDPP RSYV S
Sbjct: 988 EVLRRFRHHECNILVSTRVLEEGIDVPQCNLVLRFDPPTDYRSYVHS 1034
>gi|283827860|gb|ADB44075.1| dicer-1 [Marsupenaeus japonicus]
Length = 2482
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 32/47 (68%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQS 50
+ + F NILV+T VLEEGID+ CNLV++FDPP RSYV S
Sbjct: 998 EVLRRFRHHECNILVSTRVLEEGIDVPQCNLVLRFDPPTDYRSYVHS 1044
>gi|322798622|gb|EFZ20226.1| hypothetical protein SINV_07138 [Solenopsis invicta]
Length = 94
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+++ F G N +V+TDV++EGIDI +C L+I++D P R+YVQSK
Sbjct: 7 SIIKFKNGSINCIVSTDVVDEGIDIPTCTLIIRYDMPMDFRAYVQSKG 54
>gi|222625282|gb|EEE59414.1| hypothetical protein OsJ_11564 [Oryza sativa Japonica Group]
Length = 1371
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
SF +G +I++AT +LEEG+D+ SCNLVI+FDP S++QS+
Sbjct: 452 SFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRG 496
>gi|41469333|gb|AAS07189.1| putative ribonuclease III, 5'-partial (with alternative splicing)
[Oryza sativa Japonica Group]
Length = 1017
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
SF +G +I++AT +LEEG+D+ SCNLVI+FDP S++QS+
Sbjct: 59 SFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRG 103
>gi|115453927|ref|NP_001050564.1| Os03g0583900 [Oryza sativa Japonica Group]
gi|122246906|sp|Q10HL3.1|DCL2A_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 2a; AltName:
Full=Dicer-like protein 2a; Short=OsDCL2a
gi|50399921|gb|AAT76309.1| putative RNA helicase/RNAseIII protein, C-terminus truncated [Oryza
sativa Japonica Group]
gi|108709535|gb|ABF97330.1| Type III restriction enzyme, res subunit family protein, expressed
[Oryza sativa Japonica Group]
gi|113549035|dbj|BAF12478.1| Os03g0583900 [Oryza sativa Japonica Group]
gi|215701504|dbj|BAG92928.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1410
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
SF +G +I++AT +LEEG+D+ SCNLVI+FDP S++QS+
Sbjct: 452 SFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRG 496
>gi|218193216|gb|EEC75643.1| hypothetical protein OsI_12390 [Oryza sativa Indica Group]
Length = 1318
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
SF +G +I++AT +LEEG+D+ SCNLVI+FDP S++QS+
Sbjct: 387 SFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRG 431
>gi|251764794|sp|Q69LX2.2|DCL2B_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 2b; AltName:
Full=Dicer-like protein 2b; Short=OsDCL2b
Length = 1377
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
SF +G +I++AT +LEEG+D+ SCNLVI+FDP S++QS+
Sbjct: 452 SFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRG 496
>gi|50726394|dbj|BAD34005.1| CAF protein-like [Oryza sativa Japonica Group]
gi|51091635|dbj|BAD36404.1| CAF protein-like [Oryza sativa Japonica Group]
Length = 1375
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
SF +G +I++AT +LEEG+D+ SCNLVI+FDP S++QS+
Sbjct: 452 SFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRG 496
>gi|115401870|ref|XP_001216523.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114190464|gb|EAU32164.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1635
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
M T+ F G N++VATDVLEEGIDI +C++VI +D P + +S+VQ +
Sbjct: 412 MQRDTLSEFRSGQKNLIVATDVLEEGIDISACSVVICYDKPANVKSFVQRRG 463
>gi|315051166|ref|XP_003174957.1| hypothetical protein MGYG_02485 [Arthroderma gypseum CBS 118893]
gi|311340272|gb|EFQ99474.1| hypothetical protein MGYG_02485 [Arthroderma gypseum CBS 118893]
Length = 1425
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 32/41 (78%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
G N+L+AT VLEEGID+ +C+LV+ FDPP+ RS+VQ +
Sbjct: 478 GKKNLLIATSVLEEGIDVSACDLVVCFDPPKQLRSFVQRRG 518
>gi|321461347|gb|EFX72380.1| hypothetical protein DAPPUDRAFT_308316 [Daphnia pulex]
Length = 1741
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
NILVAT VLE+GID+ +C+LVI++D PQ R+YV SKA
Sbjct: 422 NILVATSVLEDGIDVPACHLVIRYDLPQSYRAYVHSKA 459
>gi|195997771|ref|XP_002108754.1| hypothetical protein TRIADDRAFT_18215 [Trichoplax adhaerens]
gi|190589530|gb|EDV29552.1| hypothetical protein TRIADDRAFT_18215 [Trichoplax adhaerens]
Length = 1018
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F R NILVAT+VLEEGID+ CNLV++FD + SY+Q+K +H IL +
Sbjct: 316 FRRQDVNILVATNVLEEGIDVPKCNLVVRFDEIKTFGSYLQAKGRARAQHAHYIILVEKD 375
Query: 69 K-SERYLQYNSPKINRLLQLLRRYNPDQRTIIFCQRRA 105
K ++ Q+++ L RY DQ CQ RA
Sbjct: 376 KIADARDQFST------WSYLERYLQDQ-----CQCRA 402
>gi|324500060|gb|ADY40039.1| Endoribonuclease dcr-1 [Ascaris suum]
gi|333440972|gb|AEF32761.1| DCR-1 [Ascaris suum]
Length = 1970
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+LVAT VLEEG+D++ CN+VI+FD P R+Y+QSK
Sbjct: 476 NLLVATSVLEEGVDVKQCNVVIRFDRPTDYRAYIQSKG 513
>gi|194744012|ref|XP_001954492.1| GF18290 [Drosophila ananassae]
gi|190627529|gb|EDV43053.1| GF18290 [Drosophila ananassae]
Length = 2252
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T +LEEGID+ CNLV+++DPP RSYVQ K
Sbjct: 562 NVLIGTSILEEGIDVPKCNLVVRWDPPTTYRSYVQCKG 599
>gi|312384317|gb|EFR29067.1| hypothetical protein AND_02261 [Anopheles darlingi]
Length = 1651
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 34/51 (66%)
Query: 2 DVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
D Q + F + N+L AT+VLEEGID+Q CN+V+ FD P SY+QSK
Sbjct: 406 DRQVIKKFRKHQINVLCATNVLEEGIDLQMCNIVVMFDEPLSYSSYMQSKG 456
>gi|443925066|gb|ELU43989.1| type III restriction enzyme [Rhizoctonia solani AG-1 IA]
Length = 1442
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQIL 64
T+ +F G N+++AT V EEG+D Q+C LV++ D PQ Y+QS+ A +L
Sbjct: 448 TVRNFRSGSINLVIATSVAEEGLDFQACKLVVRLDAPQTMVGYLQSRGRARKHDSAYVVL 507
Query: 65 SQYPKSERYLQYN--SPKINRLLQLLRRYNPDQ 95
+ ++RY + P + R+ Q + Q
Sbjct: 508 TDPEGAKRYRGFRGAEPHLRRIYQRISEEEAQQ 540
>gi|168027292|ref|XP_001766164.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
gi|162682596|gb|EDQ69013.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
Length = 1460
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 37/48 (77%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TM +FN+G N+LVAT++ EEGID+++C VI+F+ P+ RS +QS+
Sbjct: 423 TMTAFNKGEINLLVATELAEEGIDVKNCGEVIRFNLPKTLRSNIQSRG 470
>gi|356509849|ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max]
Length = 1671
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQY 67
SF G N+L TDVLEEGI + +C+ VI+FD P+ RSYVQS R ++ Q SQ+
Sbjct: 485 SFRSGKVNLLFTTDVLEEGIHVPNCSCVIRFDLPKTVRSYVQS------RGRSRQANSQF 538
>gi|426200573|gb|EKV50497.1| hypothetical protein AGABI2DRAFT_64825 [Agaricus bisporus var.
bisporus H97]
Length = 1717
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 11/91 (12%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA--------FTVVRHK 59
+F +G N+L+AT V EEG+D +C+LV++FDP +H YVQS+ F V+ +
Sbjct: 434 AFRKGEVNVLIATSVAEEGLDFPACDLVVRFDPFRHMVGYVQSRGRARNADSRFIVMIRQ 493
Query: 60 AEQILSQYPKSERYLQYNSPKINRLLQLLRR 90
+Q+ ++ ++ L P++N+ Q +R
Sbjct: 494 DDQVSFEFYQN---LLAQEPEMNKAYQGRQR 521
>gi|336260369|ref|XP_003344980.1| hypothetical protein SMAC_06757 [Sordaria macrospora k-hell]
gi|380095053|emb|CCC07555.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1365
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 2 DVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
D +++ F G N+LVAT+VLEEGID+ CNLVI FD P + +S++Q +
Sbjct: 476 DNKSLEGFREGRFNLLVATNVLEEGIDVPICNLVICFDKPSNIKSFIQRRG 526
>gi|312069719|ref|XP_003137813.1| hypothetical protein LOAG_02227 [Loa loa]
gi|307767024|gb|EFO26258.1| hypothetical protein LOAG_02227 [Loa loa]
Length = 1928
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+AT VLEEG+D++ CN+VI+FD P R+YVQSK
Sbjct: 452 NLLIATSVLEEGVDVRQCNVVIRFDRPTDYRAYVQSKG 489
>gi|425768111|gb|EKV06651.1| ATP-dependent DNA helicase recQ [Penicillium digitatum Pd1]
gi|425769790|gb|EKV08272.1| ATP-dependent DNA helicase recQ [Penicillium digitatum PHI26]
Length = 119
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
M T+ F G N++VATDVLEEGIDI +C+LV+ ++ P + +S+VQ +
Sbjct: 1 MQRDTLNEFRAGRKNLIVATDVLEEGIDISACSLVVCYNKPANLKSFVQRRG 52
>gi|328874858|gb|EGG23223.1| RNA-directed RNA polymerase [Dictyostelium fasciculatum]
Length = 2645
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
M SF +G LVAT VLEEGID+Q CN+VI FDP + R+ +Q +
Sbjct: 591 MESFRKGDCKFLVATSVLEEGIDVQQCNMVISFDPDLNLRNMIQRRG 637
>gi|170591572|ref|XP_001900544.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
gi|158592156|gb|EDP30758.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
Length = 1856
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+AT VLEEG+D++ CN+VI+FD P R+YVQSK
Sbjct: 452 NLLIATSVLEEGVDVRQCNVVIRFDRPTDYRAYVQSKG 489
>gi|157285011|gb|ABV31245.1| dicer-like 3 [Physcomitrella patens]
Length = 1641
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 37/48 (77%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TM +FN+G N+LVAT++ EEGID+++C VI+F+ P+ RS +QS+
Sbjct: 491 TMTAFNKGEINLLVATELAEEGIDVKNCGEVIRFNLPKTLRSNIQSRG 538
>gi|158706443|sp|Q0CEI2.2|DCL2_ASPTN RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
Length = 1377
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
M T+ F G N++VATDVLEEGIDI +C++VI +D P + +S+VQ +
Sbjct: 438 MQRDTLSEFRSGQKNLIVATDVLEEGIDISACSVVICYDKPANVKSFVQRRG 489
>gi|195995859|ref|XP_002107798.1| hypothetical protein TRIADDRAFT_51673 [Trichoplax adhaerens]
gi|190588574|gb|EDV28596.1| hypothetical protein TRIADDRAFT_51673 [Trichoplax adhaerens]
Length = 1418
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ M F R N+LVAT+VLEEG+D+ CN+VI+FD H SY+QS+
Sbjct: 472 EVMNRFRRHKYNLLVATNVLEEGVDVSECNVVIRFDRVNHFSSYLQSRG 520
>gi|453080784|gb|EMF08834.1| P-loop containing nucleoside triphosphate hydrolase protein
[Mycosphaerella populorum SO2202]
Length = 1400
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + +F G N++VAT+VLEEGIDI +CNLVI FD P++ S+VQ +
Sbjct: 447 KDLQAFRDGHKNVMVATNVLEEGIDISACNLVICFDAPKNLVSFVQRRG 495
>gi|302693114|ref|XP_003036236.1| hypothetical protein SCHCODRAFT_31237 [Schizophyllum commune H4-8]
gi|300109932|gb|EFJ01334.1| hypothetical protein SCHCODRAFT_31237, partial [Schizophyllum
commune H4-8]
Length = 1342
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G N+L+AT V EEG D Q+C+LV++FDP QH Y+QS+ R+K+ + P
Sbjct: 414 FRSGEVNLLIATSVAEEGHDFQACDLVVRFDPLQHLVGYLQSRG--RARNKSSMFVVMLP 471
Query: 69 KSE 71
+ +
Sbjct: 472 EGD 474
>gi|340975794|gb|EGS22909.1| hypothetical protein CTHT_0013870 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1660
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
++ + +F +G N++VAT VLEEGID+ +CNLV+ FD P++ +S++Q + R +
Sbjct: 648 LEALQAFRQGEVNLVVATSVLEEGIDVPACNLVVCFDVPENLKSFIQRRG--RARMGVSK 705
Query: 63 ILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQRTI 98
++ P+ E+ ++ R ++ Y D R +
Sbjct: 706 LVLMVPEGEQAKGWDE----REREMKEMYEDDMRVV 737
>gi|302794558|ref|XP_002979043.1| hypothetical protein SELMODRAFT_444049 [Selaginella moellendorffii]
gi|300153361|gb|EFJ20000.1| hypothetical protein SELMODRAFT_444049 [Selaginella moellendorffii]
Length = 1686
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 6/64 (9%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+ + SF G N+L+AT V EEG+D+Q+C VI+FD Q RS+VQS R +A +
Sbjct: 768 EVLHSFAGGKLNLLIATSVAEEGLDVQACCAVIRFDVCQTLRSHVQS------RGRARNL 821
Query: 64 LSQY 67
LS Y
Sbjct: 822 LSTY 825
>gi|240247227|emb|CAX68236.1| dicer-1 [Blattella germanica]
Length = 2271
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+LV T VLEEGID+ CNLVI F+ PQ RSYVQSK
Sbjct: 730 NLLVGTSVLEEGIDVPKCNLVIHFNVPQVYRSYVQSKG 767
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 50 SKAFTVVRHKAEQILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQ 95
S +R E +Y + +R Q++SPK+ RLL++LR++ PD+
Sbjct: 331 STVMVKIRAICEDFFQKYDEKDRIYQFSSPKVLRLLEILRQFKPDK 376
>gi|161783812|sp|Q7SCC1.3|DCL2_NEUCR RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl-2; Includes: RecName:
Full=ATP-dependent helicase dcl-2
gi|18376024|emb|CAB91758.2| related to RNA helicase/RNAseIII CAF [Neurospora crassa]
Length = 1540
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 2 DVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAE 61
D+ ++ F G N+LVAT VLEEGID+ CNLVI FD P + +S++Q +
Sbjct: 474 DMTSLEGFRLGRFNLLVATSVLEEGIDVPICNLVICFDEPSNIKSFIQRRGRAREVSSTL 533
Query: 62 QILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQR 96
++ Q SE +++ + RL++ RY + R
Sbjct: 534 YLMVQNASSESATDWHN--LERLMK--ERYEDEMR 564
>gi|169868762|ref|XP_001840952.1| hypothetical protein CC1G_03181 [Coprinopsis cinerea okayama7#130]
gi|116498110|gb|EAU81005.1| hypothetical protein CC1G_03181 [Coprinopsis cinerea okayama7#130]
Length = 2074
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQIL 64
T+ SF GI N+++AT V EEG+DI +C VI++DPP + S++QS+ R K
Sbjct: 484 TLSSFRLGIHNLILATSVAEEGLDIPACGSVIRWDPPPNMASWIQSRG--RARRKRSTFT 541
Query: 65 SQYPKSERYLQYNSPK 80
Y E Q N K
Sbjct: 542 LMYDVEEDRAQANVAK 557
>gi|302766077|ref|XP_002966459.1| hypothetical protein SELMODRAFT_407400 [Selaginella moellendorffii]
gi|300165879|gb|EFJ32486.1| hypothetical protein SELMODRAFT_407400 [Selaginella moellendorffii]
Length = 497
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
++ F G N++VAT+V EEG+DIQSC+LVI+F+ P+ RS +QS+
Sbjct: 367 SLEDFRAGKANVIVATNVAEEGLDIQSCSLVIRFNMPKTERSSIQSRG 414
>gi|158706449|sp|A2R345.2|DCL21_ASPNC RecName: Full=Dicer-like protein 2-1; Includes: RecName:
Full=Endoribonuclease dcl2-1; Includes: RecName:
Full=ATP-dependent helicase dcl2-1
Length = 1387
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKA 60
M T+ F G N+++ATDVLEEGIDI +C++V+ FD P + +S+VQ + R
Sbjct: 440 MQRDTLSEFRTGQKNLIIATDVLEEGIDISACSVVVCFDKPPNLKSFVQRRGRARHRQST 499
Query: 61 EQIL 64
I+
Sbjct: 500 YAIM 503
>gi|164424566|ref|XP_963538.2| hypothetical protein NCU06766 [Neurospora crassa OR74A]
gi|157070568|gb|EAA34302.2| predicted protein [Neurospora crassa OR74A]
Length = 1421
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 2 DVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAE 61
D+ ++ F G N+LVAT VLEEGID+ CNLVI FD P + +S++Q +
Sbjct: 472 DMTSLEGFRLGRFNLLVATSVLEEGIDVPICNLVICFDEPSNIKSFIQRRGRAREVSSTL 531
Query: 62 QILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQR 96
++ Q SE +++ + RL++ RY + R
Sbjct: 532 YLMVQNASSESATDWHN--LERLMK--ERYEDEMR 562
>gi|134081603|emb|CAK46537.1| unnamed protein product [Aspergillus niger]
Length = 1352
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKA 60
M T+ F G N+++ATDVLEEGIDI +C++V+ FD P + +S+VQ + R
Sbjct: 405 MQRDTLSEFRTGQKNLIIATDVLEEGIDISACSVVVCFDKPPNLKSFVQRRGRARHRQST 464
Query: 61 EQIL 64
I+
Sbjct: 465 YAIM 468
>gi|330370549|gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum]
Length = 1655
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+T+ SF G N+L TDV+EEGI + +C VI+FD P+ RSYVQS+
Sbjct: 464 ETLESFRSGKVNLLFTTDVVEEGIHVPNCCYVIRFDLPKTVRSYVQSRG 512
>gi|389635425|ref|XP_003715365.1| dicer-like protein 2 [Magnaporthe oryzae 70-15]
gi|374095503|sp|A4RHU9.3|DCL2_MAGO7 RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease DCL2; Includes: RecName:
Full=ATP-dependent helicase DCL2
gi|351647698|gb|EHA55558.1| dicer-like protein 2 [Magnaporthe oryzae 70-15]
gi|440467937|gb|ELQ37130.1| hypothetical protein OOU_Y34scaffold00618g20 [Magnaporthe oryzae
Y34]
gi|440483523|gb|ELQ63906.1| hypothetical protein OOW_P131scaffold00922g30 [Magnaporthe oryzae
P131]
Length = 1485
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 2 DVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAE 61
D+ + F G N+LVAT VLEEGID+ CNLVI FD P + +S++Q + +R
Sbjct: 486 DLLALEKFRSGAINLLVATSVLEEGIDVPVCNLVICFDMPANLKSFIQRRGRARMRESKL 545
Query: 62 QIL 64
++
Sbjct: 546 HLM 548
>gi|321458470|gb|EFX69538.1| hypothetical protein DAPPUDRAFT_329028 [Daphnia pulex]
Length = 1597
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+LVAT VLEEG+D+++CNLVI+FD + YVQSK
Sbjct: 458 FRDGTCNLLVATSVLEEGVDVRACNLVIRFDGIKTFCDYVQSKG 501
>gi|317035030|ref|XP_001400925.2| ATP-dependent helicase dcl2 [Aspergillus niger CBS 513.88]
Length = 1407
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKA 60
M T+ F G N+++ATDVLEEGIDI +C++V+ FD P + +S+VQ + R
Sbjct: 440 MQRDTLSEFRTGQKNLIIATDVLEEGIDISACSVVVCFDKPPNLKSFVQRRGRARHRQST 499
Query: 61 EQIL 64
I+
Sbjct: 500 YAIM 503
>gi|350639413|gb|EHA27767.1| hypothetical protein ASPNIDRAFT_211065 [Aspergillus niger ATCC
1015]
Length = 1372
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKA 60
M T+ F G N+++ATDVLEEGIDI +C++V+ FD P + +S+VQ + R
Sbjct: 425 MQRDTLSEFRTGQKNLIIATDVLEEGIDISACSVVVCFDKPPNLKSFVQRRGRARHRQST 484
Query: 61 EQIL 64
I+
Sbjct: 485 YAIM 488
>gi|302755618|ref|XP_002961233.1| hypothetical protein SELMODRAFT_74321 [Selaginella moellendorffii]
gi|300172172|gb|EFJ38772.1| hypothetical protein SELMODRAFT_74321 [Selaginella moellendorffii]
Length = 1291
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
V+T+ +F G N+L+ T V EEG+D+QSCN V++FD + RS++QS+
Sbjct: 363 VETVKAFKSGELNVLICTSVAEEGLDVQSCNCVVRFDICRTLRSFIQSRG 412
>gi|449299331|gb|EMC95345.1| hypothetical protein BAUCODRAFT_46072, partial [Baudoinia
compniacensis UAMH 10762]
Length = 1298
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 6/62 (9%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
+L F RG N++VAT VLEEGID+ +CNLVI FD P +++Q R +A Q S
Sbjct: 425 LLGFRRGDKNLIVATSVLEEGIDVSACNLVINFDQPDTFIAFLQR------RGRARQENS 478
Query: 66 QY 67
+Y
Sbjct: 479 RY 480
>gi|302800610|ref|XP_002982062.1| hypothetical protein SELMODRAFT_421514 [Selaginella moellendorffii]
gi|300150078|gb|EFJ16730.1| hypothetical protein SELMODRAFT_421514 [Selaginella moellendorffii]
Length = 497
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
++ F G N++VAT+V EEG+DIQSC+LVI+F+ P+ RS +QS+
Sbjct: 367 SLEDFRAGKANVIVATNVAEEGLDIQSCSLVIRFNMPKTERSSIQSRG 414
>gi|260831340|ref|XP_002610617.1| hypothetical protein BRAFLDRAFT_202604 [Branchiostoma floridae]
gi|229295984|gb|EEN66627.1| hypothetical protein BRAFLDRAFT_202604 [Branchiostoma floridae]
Length = 1760
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T V+EEG+D+ CNLV++FD P+ RSYVQSK
Sbjct: 474 NLLIGTSVVEEGVDVPKCNLVVRFDLPKDYRSYVQSKG 511
>gi|321475108|gb|EFX86072.1| hypothetical protein DAPPUDRAFT_309030 [Daphnia pulex]
Length = 1607
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ M F G+ N+LVAT VLEEGIDI CNL+I+FD + YVQ+K
Sbjct: 425 EIMQYFREGLCNLLVATSVLEEGIDIPDCNLIIRFDRIKTYCDYVQTKG 473
>gi|302687578|ref|XP_003033469.1| hypothetical protein SCHCODRAFT_37756 [Schizophyllum commune H4-8]
gi|300107163|gb|EFI98566.1| hypothetical protein SCHCODRAFT_37756, partial [Schizophyllum
commune H4-8]
Length = 1343
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+T+ F G N++V+T V EEGIDIQ+C V+++DPP + S+VQS+
Sbjct: 458 ETLEDFRLGTKNVIVSTSVAEEGIDIQACGCVVRWDPPPNMASWVQSRG 506
>gi|392566224|gb|EIW59400.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 1508
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 11/87 (12%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSK--------AFTVV 56
T+ F G N++V+T V EEGIDIQ+C VI+FDPP + ++ QS+ +F ++
Sbjct: 469 TLRDFKIGDKNLIVSTSVAEEGIDIQACGSVIRFDPPPNIVAWAQSRGRARRKRSSFIIM 528
Query: 57 -RHKAEQILSQYPKSER--YLQYNSPK 80
Q + ++ +ER L YN P+
Sbjct: 529 FEETGPQKVKEWEATERQMMLAYNDPR 555
>gi|121807817|sp|Q2VF19.1|DCL1_CRYPA RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL-1; Includes: RecName:
Full=ATP-dependent helicase DCL-1
gi|77632774|gb|ABB00356.1| dicer-like protein 1 [Cryphonectria parasitica]
Length = 1548
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 13/103 (12%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
++T+LSF +G TN + AT V EEG+DI CNL+I+FD + Y+QS R +A Q
Sbjct: 494 IRTILSFKKGNTNCIFATSVAEEGLDIPDCNLIIRFDICKTMIQYIQS------RGRARQ 547
Query: 63 ILSQYPK-------SERYLQYNSPKINRLLQLLRRYNPDQRTI 98
S Y R + + + + +LL+ P+ R +
Sbjct: 548 ADSTYIHLIEGGNGDHRRIMHQNAENEKLLRRFCNTQPEDRLL 590
>gi|336378007|gb|EGO19166.1| hypothetical protein SERLADRAFT_443209 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1489
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+L F G N+++AT V EEG+DIQ+C VI++D P + S+ QS+
Sbjct: 475 ANTLLDFRSGDINLIIATAVAEEGLDIQACGNVIRWDAPNNMASWAQSRG 524
>gi|167234451|ref|NP_001107840.1| Dicer-2 [Tribolium castaneum]
gi|270002830|gb|EEZ99277.1| hypothetical protein TcasGA2_TC001108 [Tribolium castaneum]
Length = 1623
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + SF N+LV+++VLEEG+DI C LVIKFD + RSY+QSK
Sbjct: 436 EVLNSFVSKEINVLVSSNVLEEGVDIPKCTLVIKFDKSEDYRSYIQSKG 484
>gi|336365445|gb|EGN93795.1| hypothetical protein SERLA73DRAFT_115225 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1493
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+L F G N+++AT V EEG+DIQ+C VI++D P + S+ QS+
Sbjct: 479 ANTLLDFRSGDINLIIATAVAEEGLDIQACGNVIRWDAPNNMASWAQSRG 528
>gi|307109321|gb|EFN57559.1| hypothetical protein CHLNCDRAFT_143199 [Chlorella variabilis]
Length = 2232
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 33/44 (75%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+LV+T V EEGID++SC LV+++D P + +SY+QS+
Sbjct: 863 FRAGELNLLVSTSVAEEGIDVKSCQLVVRYDLPNNAQSYIQSRG 906
>gi|156044530|ref|XP_001588821.1| hypothetical protein SS1G_10369 [Sclerotinia sclerotiorum 1980]
gi|154694757|gb|EDN94495.1| hypothetical protein SS1G_10369 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1515
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G +IL+AT+VLEEGID+++CNLVI F P + +S++Q +
Sbjct: 527 TLSRFKLGKIDILIATNVLEEGIDVRACNLVICFSKPSNLKSFIQRRG 574
>gi|255933596|ref|XP_002558177.1| Pc12g13700 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582796|emb|CAP80997.1| Pc12g13700 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1393
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKA 60
M T+ F G N++V TDVLEEGID+ +C+LVI +D P + +S+VQ + RH+
Sbjct: 451 MQRDTLDEFKVGRKNLIVTTDVLEEGIDVSACSLVICYDKPANLKSFVQRRG--RARHRE 508
Query: 61 EQILSQYPKSERYLQYNSPKINRLLQ-LLRRYNPDQR 96
+ L N K L Q +++ Y D+R
Sbjct: 509 STYALMISNEDELL--NLHKWQELEQAMIKAYQDDER 543
>gi|357167959|ref|XP_003581414.1| PREDICTED: endoribonuclease Dicer homolog 4-like [Brachypodium
distachyon]
Length = 1627
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 6/59 (10%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQY 67
F+ G N+LVAT V EEG+DIQ+C LV++FD P+ S++QS R +A +S+Y
Sbjct: 437 FSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQS------RGRARMTISKY 489
>gi|241061224|ref|XP_002408099.1| dicer-1, putative [Ixodes scapularis]
gi|215492368|gb|EEC02009.1| dicer-1, putative [Ixodes scapularis]
Length = 1348
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F R N+LVAT V+EEG+D+ C+LV++FD P RSYVQSK
Sbjct: 490 KVLEQFRRQECNLLVATSVVEEGMDVPKCSLVVRFDFPPDYRSYVQSKG 538
>gi|413918887|gb|AFW58819.1| hypothetical protein ZEAMMB73_957371 [Zea mays]
Length = 511
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 12/75 (16%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA----------FTVVR- 57
F+ G N+LVAT V EEG+DIQ+C LV++FD P+ S++QS+ F + R
Sbjct: 56 FSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVNSFIQSRGRARMSKSKYVFLLERG 115
Query: 58 -HKAEQILSQYPKSE 71
H E++L Y E
Sbjct: 116 NHSQEKLLDDYITGE 130
>gi|358370394|dbj|GAA87005.1| dicer-like protein 2-1 [Aspergillus kawachii IFO 4308]
Length = 1396
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKA 60
M T+ F G N+++ATDVLEEGIDI +C++V+ +D P + +S+VQ + R
Sbjct: 440 MQRDTLSEFRTGQKNLIIATDVLEEGIDISACSVVVCYDKPPNLKSFVQRRGRARHRQST 499
Query: 61 EQIL 64
I+
Sbjct: 500 YAIM 503
>gi|340373457|ref|XP_003385258.1| PREDICTED: endoribonuclease Dicer-like [Amphimedon queenslandica]
Length = 1520
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 36/49 (73%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F G N+L+AT V+EEG+D++ CN+VI++D P+ +S+VQSK
Sbjct: 421 EVLKKFRSGTLNLLIATSVVEEGLDVRKCNVVIRYDFPKTFQSHVQSKG 469
>gi|409042283|gb|EKM51767.1| hypothetical protein PHACADRAFT_150441 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1556
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQS 50
Q + F G N++V+T V EEGIDIQ+C VI+FDPP + S+ QS
Sbjct: 464 QVLKDFRTGDKNLVVSTAVAEEGIDIQACGTVIRFDPPDNMVSWAQS 510
>gi|312069940|ref|XP_003137916.1| type III restriction enzyme [Loa loa]
gi|307766923|gb|EFO26157.1| type III restriction enzyme [Loa loa]
Length = 1032
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
+FN+G +LVAT V EEG+DI +CNL+IK++ RS +Q + RH +L+
Sbjct: 739 NFNQGTLKVLVATSVAEEGLDISACNLIIKYNNTGSERSLIQRRGRARARHSRSILLA 796
>gi|330944921|ref|XP_003306459.1| hypothetical protein PTT_19601 [Pyrenophora teres f. teres 0-1]
gi|311316023|gb|EFQ85435.1| hypothetical protein PTT_19601 [Pyrenophora teres f. teres 0-1]
Length = 1448
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
T+ F GI N+++AT VLEEGID+ SC+LVI F+ P++ +S+VQ
Sbjct: 498 TLDDFRAGIINLVLATSVLEEGIDVSSCHLVICFEQPKNLKSFVQ 542
>gi|332029751|gb|EGI69620.1| Endoribonuclease Dcr-1 [Acromyrmex echinatior]
Length = 1257
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 9/65 (13%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA---------FTVVRHKAEQ 62
G +N +VATDV++EGIDI C L+I++D P R+YVQSK +V + E
Sbjct: 135 GSSNCIVATDVVDEGIDIPMCTLIIRYDVPTDFRAYVQSKGRARHNLSSYLILVENDDED 194
Query: 63 ILSQY 67
L +Y
Sbjct: 195 FLKKY 199
>gi|367055364|ref|XP_003658060.1| hypothetical protein THITE_2033760, partial [Thielavia terrestris
NRRL 8126]
gi|347005326|gb|AEO71724.1| hypothetical protein THITE_2033760, partial [Thielavia terrestris
NRRL 8126]
Length = 1118
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 37/50 (74%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ ++ +F +G N+LVAT VLEEGID+ +CNLVI FD ++ +S++Q +
Sbjct: 355 ILSLQAFRKGTINLLVATSVLEEGIDVPACNLVICFDRLENLKSFIQRRG 404
>gi|407923675|gb|EKG16741.1| Ribonuclease III [Macrophomina phaseolina MS6]
Length = 1533
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
V T+L F +G N L AT V EEG+DI +CN+VI+FD + YVQS+ RHK +
Sbjct: 484 VMTLLRFKKGELNCLFATSVAEEGLDIPNCNIVIRFDLYKTMIQYVQSRG--RARHKNSR 541
Query: 63 ILSQYPK---SERYLQYNSPKINRLLQLLRRYNPDQRTI 98
L + S R + + RL++ P+ R +
Sbjct: 542 YLHMVEEGNISHRQTVLEARQAERLMREFCESLPENRLL 580
>gi|169608916|ref|XP_001797877.1| hypothetical protein SNOG_07542 [Phaeosphaeria nodorum SN15]
gi|160701743|gb|EAT85008.2| hypothetical protein SNOG_07542 [Phaeosphaeria nodorum SN15]
Length = 1017
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 36/48 (75%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ +F G N+++AT VLEEGID+ SC+LV+ F+ P++ +S+VQ +
Sbjct: 209 TLENFRAGKLNLILATSVLEEGIDVSSCHLVVCFESPKNLKSFVQRRG 256
>gi|219119937|ref|XP_002180719.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408192|gb|EEC48127.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 822
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 32/50 (64%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFT 54
T+ +F G N+LVATDV GIDIQ +LVI+FDPP+ +YV T
Sbjct: 477 TLAAFRSGAFNVLVATDVAARGIDIQDVDLVIQFDPPRDVDTYVHRSGRT 526
>gi|403417815|emb|CCM04515.1| predicted protein [Fibroporia radiculosa]
Length = 1463
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQIL 64
N+L+AT V EEG+D +C+LVI+FDP QH Y+QS+ RH++ + +
Sbjct: 446 NLLIATSVAEEGLDFPACDLVIRFDPLQHMVGYLQSRG--RARHRSSKFI 493
>gi|218195189|gb|EEC77616.1| hypothetical protein OsI_16596 [Oryza sativa Indica Group]
Length = 1576
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F+ G N+LVAT V EEG+DIQ+C LV++FD P+ S++QS+
Sbjct: 386 FSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRG 429
>gi|409046535|gb|EKM56015.1| hypothetical protein PHACADRAFT_122116 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1496
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+LVAT V EEG+D +C LV++FDP QH Y+QS+
Sbjct: 431 FRDGECNLLVATSVAEEGLDFPACELVVRFDPIQHMVGYIQSRG 474
>gi|342877213|gb|EGU78706.1| hypothetical protein FOXB_10811 [Fusarium oxysporum Fo5176]
Length = 927
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
Q + F G N+LVAT VLEEGID+ +CNLV+ FD +S++Q +
Sbjct: 490 QVLDDFRSGAINLLVATSVLEEGIDVPACNLVVSFDEIATLKSFIQRRG 538
>gi|426194802|gb|EKV44733.1| hypothetical protein AGABI2DRAFT_209093 [Agaricus bisporus var.
bisporus H97]
Length = 1524
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+TM F G N+++AT V EEGIDIQ+C VI++D PQ+ S+ QS+
Sbjct: 464 ETMAEFRSGDLNLIIATAVAEEGIDIQACGSVIRWDLPQNMASWAQSRG 512
>gi|346970337|gb|EGY13789.1| RNase3 domain-containing protein [Verticillium dahliae VdLs.17]
Length = 1563
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 31/50 (62%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
V T+ F RG N L+AT V EEGIDI CN+VI+FD Y+QSK
Sbjct: 540 VMTITKFRRGEYNCLLATSVAEEGIDIADCNIVIRFDLFNSVIQYIQSKG 589
>gi|409076508|gb|EKM76879.1| hypothetical protein AGABI1DRAFT_77978 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1528
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+TM F G N+++AT V EEGIDIQ+C VI++D PQ+ S+ QS+
Sbjct: 464 ETMAEFRSGDLNLIIATAVAEEGIDIQACGSVIRWDLPQNMASWAQSRG 512
>gi|379987682|gb|AFD22621.1| dicer-like 4 protein [Nicotiana attenuata]
Length = 1622
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 12/87 (13%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G N+LVAT V EEG+DIQ+C LVI+FD P+ S++QS+ ++ P
Sbjct: 461 FRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRG-----------RARMP 509
Query: 69 KSERYLQYNSPKINRLLQLLRRYNPDQ 95
KSE +S R L L+ ++ ++
Sbjct: 510 KSEYAFLVDSDN-QRELNLIEHFSRNE 535
>gi|378734261|gb|EHY60720.1| hypothetical protein HMPREF1120_08668 [Exophiala dermatitidis
NIH/UT8656]
Length = 1469
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+ + F RG N+ +AT VLEEGID+ S NLVI FD + RS+VQS R +A Q
Sbjct: 450 ENLERFRRGQLNLCIATSVLEEGIDVPSMNLVISFDARPNLRSFVQS------RGRARQR 503
Query: 64 LSQY 67
S+Y
Sbjct: 504 NSKY 507
>gi|289711908|gb|ACC62400.2| ribonuclease III [Penaeus monodon]
Length = 2473
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/35 (68%), Positives = 28/35 (80%)
Query: 16 ILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQS 50
ILV+T VLEEGID+ CNLV++FDPP RSYV S
Sbjct: 1000 ILVSTRVLEEGIDVPQCNLVLRFDPPTDYRSYVLS 1034
>gi|157279689|dbj|BAF80150.1| SHOOT ORGANIZATION1 [Oryza sativa Japonica Group]
Length = 1631
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F+ G N+LVAT V EEG+DIQ+C LV++FD P+ S++QS+
Sbjct: 447 FSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRG 490
>gi|251764670|sp|A7LFZ6.1|DCL4_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 4; AltName:
Full=Dicer-like protein 4; Short=OsDCL4; AltName:
Full=Protein SHOOT ORGANIZATION 1
gi|152926631|gb|ABS32306.1| dicer-like protein [Oryza sativa Japonica Group]
Length = 1657
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F+ G N+LVAT V EEG+DIQ+C LV++FD P+ S++QS+
Sbjct: 473 FSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRG 516
>gi|395331143|gb|EJF63525.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 1526
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 12/84 (14%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSK--------AFTVVRHKA 60
F G N++V+T V EEGIDIQ+C V++FD P + S+ QS+ +F ++ +A
Sbjct: 476 FKIGDKNLIVSTSVAEEGIDIQACGSVVRFDIPPNVVSWAQSRGRARRKRSSFVIMFDQA 535
Query: 61 E--QILSQYPKSERYLQ--YNSPK 80
E +++ ++ ++ER + YN P+
Sbjct: 536 EPREVVRKWEETERRMMAAYNDPR 559
>gi|157285013|gb|ABV31246.1| dicer-like 4 [Physcomitrella patens]
Length = 1445
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
SF G N+LV+T+V EEG+DIQ+C+LVI+FD P S +QS+
Sbjct: 457 SFRNGEVNVLVSTNVAEEGLDIQNCHLVIRFDLPNTPCSLIQSRG 501
>gi|121714731|ref|XP_001274976.1| RNA helicase/RNAse III, putative [Aspergillus clavatus NRRL 1]
gi|158706439|sp|A1C9M6.1|DCL2_ASPCL RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
gi|119403130|gb|EAW13550.1| RNA helicase/RNAse III, putative [Aspergillus clavatus NRRL 1]
Length = 1389
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
+ T+ F G N+++ATDVLEEGIDI +C++V+ +D P + +S+VQ + R K
Sbjct: 441 LSTLDDFRSGHKNLIIATDVLEEGIDISACSVVVCYDKPPNLKSFVQRRG--RARQKQST 498
Query: 63 ILSQYPKSERYLQYNSPKINRLLQ-LLRRYNPDQR 96
+P + ++ K L Q ++ Y D+R
Sbjct: 499 YAIMFPAEDS--AFDLAKWQTLEQAMIEAYQDDER 531
>gi|32488296|emb|CAE03362.1| OSJNBb0065L13.5 [Oryza sativa Japonica Group]
gi|116311061|emb|CAH67991.1| OSIGBa0157K09-H0214G12.2 [Oryza sativa Indica Group]
Length = 1604
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F+ G N+LVAT V EEG+DIQ+C LV++FD P+ S++QS+
Sbjct: 447 FSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRG 490
>gi|222629185|gb|EEE61317.1| hypothetical protein OsJ_15421 [Oryza sativa Japonica Group]
Length = 1632
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F+ G N+LVAT V EEG+DIQ+C LV++FD P+ S++QS+
Sbjct: 435 FSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRG 478
>gi|393246694|gb|EJD54202.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 1453
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+T+ F G N+L+AT VLEEG+D+ CN VI+F+P + S+VQS+
Sbjct: 451 ETLKDFAEGRLNLLIATSVLEEGLDVARCNCVIRFNPANNITSWVQSRG 499
>gi|302901921|ref|XP_003048541.1| hypothetical protein NECHADRAFT_95770 [Nectria haematococca mpVI
77-13-4]
gi|256729474|gb|EEU42828.1| hypothetical protein NECHADRAFT_95770 [Nectria haematococca mpVI
77-13-4]
Length = 1381
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
Q + F G+ N+LVAT VLEEGID+ +CNLV FD +S++Q R +A
Sbjct: 432 QILEDFRSGVVNLLVATSVLEEGIDVPACNLVACFDETTTLKSFIQR------RGRARMQ 485
Query: 64 LSQYPKSERYLQYNSPKINRLLQLLRRYNPDQRTI 98
S+ E L + + RRY DQR +
Sbjct: 486 ESKMIAMESSLTSSRTWEELEEGMKRRYQDDQREL 520
>gi|356546104|ref|XP_003541471.1| PREDICTED: dicer-like protein 4-like [Glycine max]
Length = 1636
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+LVAT V EEG+DIQ+C LVI+FD P+ S++QS+
Sbjct: 465 FRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRG 508
>gi|242215871|ref|XP_002473747.1| predicted protein [Postia placenta Mad-698-R]
gi|220727142|gb|EED81071.1| predicted protein [Postia placenta Mad-698-R]
Length = 1725
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQIL 64
N+L+AT V EEG+D +C+LVI+FDP QH Y+QS+ RH++ + +
Sbjct: 445 NLLIATSVAEEGLDFPACDLVIRFDPLQHMVGYLQSRG--RARHRSSKFI 492
>gi|255565079|ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis]
gi|223537239|gb|EEF38871.1| Ribonuclease III, putative [Ricinus communis]
Length = 1633
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 1 MDVQTMLS----FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVV 56
M +TM S F G N+L+AT V EEG+DIQ+C LV++FD P+ S++QS+
Sbjct: 456 MSRKTMNSILEKFKTGKLNLLIATKVGEEGLDIQTCCLVVRFDLPETVASFIQSRG---- 511
Query: 57 RHKAEQILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQ 95
++ P+SE +S + L L+ R+ D+
Sbjct: 512 -------RARMPQSEYAFLVDSGN-QKELDLIERFRRDE 542
>gi|46132992|ref|XP_389201.1| hypothetical protein FG09025.1 [Gibberella zeae PH-1]
Length = 1495
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQIL 64
T+ +F G+ N L AT V EEGIDI SC+LVI+FD YVQSK RH++ + +
Sbjct: 477 TLKNFRDGVINCLFATSVAEEGIDIPSCDLVIRFDLYTSVIQYVQSKG--RARHESSRYI 534
Query: 65 S 65
+
Sbjct: 535 T 535
>gi|356565129|ref|XP_003550797.1| PREDICTED: dicer-like protein 4-like [Glycine max]
Length = 1636
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+LVAT V EEG+DIQ+C LVI+FD P+ S++QS+
Sbjct: 466 FRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRG 509
>gi|242018047|ref|XP_002429494.1| dicer-1, putative [Pediculus humanus corporis]
gi|212514432|gb|EEB16756.1| dicer-1, putative [Pediculus humanus corporis]
Length = 2179
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 29/37 (78%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSK 51
N+L+ T LEEGI++ CNLVI+FD P+H RSY+ +K
Sbjct: 663 NLLIGTSFLEEGIELPKCNLVIRFDVPKHYRSYINTK 699
>gi|158300291|ref|XP_320248.4| AGAP012289-PA [Anopheles gambiae str. PEST]
gi|157013088|gb|EAA00264.4| AGAP012289-PA [Anopheles gambiae str. PEST]
Length = 1672
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 2 DVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
D + + +F + N+L AT+VLEEGID+Q CN+VI +D P S++QSK
Sbjct: 448 DRRVIENFRKRKINVLCATNVLEEGIDLQMCNMVIMYDAPLSYASFMQSKG 498
>gi|158705946|sp|Q0UL22.2|DCL2_PHANO RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease DCL2; Includes: RecName:
Full=ATP-dependent helicase DCL2
Length = 1399
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 36/48 (75%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ +F G N+++AT VLEEGID+ SC+LV+ F+ P++ +S+VQ +
Sbjct: 441 TLENFRAGKLNLILATSVLEEGIDVSSCHLVVCFESPKNLKSFVQRRG 488
>gi|321477029|gb|EFX87988.1| hypothetical protein DAPPUDRAFT_311480 [Daphnia pulex]
Length = 711
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
M F G N+LVAT VLEEG+DI CNL+++FD + YVQ+K + +L
Sbjct: 466 MRDFRSGNCNLLVATSVLEEGVDIPECNLIVRFDKIRTYCDYVQTKGRARSKKAFFCMLV 525
Query: 66 QYPKSERYLQ 75
S+++L+
Sbjct: 526 SSSDSKKFLE 535
>gi|449457995|ref|XP_004146733.1| PREDICTED: dicer-like protein 4-like [Cucumis sativus]
Length = 1657
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ F G N+L+AT V EEG+DIQ+C LVI+FD P+ S++QS+
Sbjct: 472 LTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVSSFIQSRG 518
>gi|398392319|ref|XP_003849619.1| dsRNA-specific nuclease [Zymoseptoria tritici IPO323]
gi|339469496|gb|EGP84595.1| dsRNA-specific nuclease [Zymoseptoria tritici IPO323]
Length = 1537
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
V T+L F +G+ N L AT V EEG+D+ CNLV++FD + YVQS+
Sbjct: 499 VWTLLKFRKGVFNCLFATSVAEEGLDVPDCNLVVRFDMYKTMIQYVQSRG 548
>gi|119487463|ref|XP_001262524.1| RNA helicase/RNAse III, putative [Neosartorya fischeri NRRL 181]
gi|158705692|sp|A1D9Z6.1|DCL2_NEOFI RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
gi|119410681|gb|EAW20627.1| RNA helicase/RNAse III, putative [Neosartorya fischeri NRRL 181]
Length = 1388
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 35/48 (72%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G N+++ATDVLEEGIDI +C++V+ +D P + +S+VQ +
Sbjct: 443 TLDDFRSGRKNLIIATDVLEEGIDISACSVVVCYDKPPNLKSFVQRRG 490
>gi|170033786|ref|XP_001844757.1| endoribonuclease Dcr-1 [Culex quinquefasciatus]
gi|167874834|gb|EDS38217.1| endoribonuclease Dcr-1 [Culex quinquefasciatus]
Length = 2270
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYPKSERYL 74
N+L+ T VLEEGID+ CNLVI+++ P RSYVQ K A IL PK ++ L
Sbjct: 558 NLLIGTSVLEEGIDLPKCNLVIRWNEPVSYRSYVQCKG-RARAPSAYHILIVTPKVDQLL 616
Query: 75 QYNSPKINRLLQLLRR 90
N + + Q+ R+
Sbjct: 617 AANGARDDLSEQVHRK 632
>gi|367035818|ref|XP_003667191.1| hypothetical protein MYCTH_2312762 [Myceliophthora thermophila ATCC
42464]
gi|347014464|gb|AEO61946.1| hypothetical protein MYCTH_2312762 [Myceliophthora thermophila ATCC
42464]
Length = 1475
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+F +G N+LVAT VLEEGID+ +CNLVI FD + +S++Q +
Sbjct: 506 AFRKGAINLLVATSVLEEGIDVPACNLVICFDKLDNLKSFIQRRG 550
>gi|258565145|ref|XP_002583317.1| predicted protein [Uncinocarpus reesii 1704]
gi|237907018|gb|EEP81419.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1194
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 32/41 (78%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
G N+++AT VLEEGID+ +C+LVI FD PQ+ RS++Q +
Sbjct: 239 GKKNLIIATSVLEEGIDVPACDLVICFDFPQNLRSFIQRRG 279
>gi|189234048|ref|XP_968993.2| PREDICTED: Dicer-1 [Tribolium castaneum]
Length = 1865
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 11/85 (12%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYPKSERYL 74
NI++AT LE+G D+ CNLVI+FD PQ SY+ SKA R +A + + L
Sbjct: 474 NIMIATSALEQGCDLPKCNLVIRFDLPQSFHSYIHSKA----RARANE-------AHFLL 522
Query: 75 QYNSPKINRLLQLLRRYNPDQRTII 99
N +++ ++ L YN + T++
Sbjct: 523 LANENEVSDFVENLAEYNEVENTLL 547
>gi|397529815|gb|AFO53518.1| dicer-like protein 4 [Solanum lycopersicum]
Length = 1620
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+L+AT V EEG+DIQ+C LVI+FD P+ S++QS+
Sbjct: 457 FRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRG 500
>gi|345571082|gb|EGX53897.1| hypothetical protein AOL_s00004g556 [Arthrobotrys oligospora ATCC
24927]
Length = 1587
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F +G+TN L+AT V EEG+D+ CNLVI+FD YVQS+
Sbjct: 571 FKKGVTNCLIATAVAEEGLDVPDCNLVIRFDLYDTMIKYVQSRG 614
>gi|270015102|gb|EFA11550.1| dicer-1 [Tribolium castaneum]
Length = 1835
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 11/85 (12%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYPKSERYL 74
NI++AT LE+G D+ CNLVI+FD PQ SY+ SKA R +A + + L
Sbjct: 474 NIMIATSALEQGCDLPKCNLVIRFDLPQSFHSYIHSKA----RARANE-------AHFLL 522
Query: 75 QYNSPKINRLLQLLRRYNPDQRTII 99
N +++ ++ L YN + T++
Sbjct: 523 LANENEVSDFVENLAEYNEVENTLL 547
>gi|159122296|gb|EDP47418.1| RNA helicase/RNAse III, putative [Aspergillus fumigatus A1163]
Length = 1384
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 35/48 (72%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G N+++ATDVLEEGID+ +C++V+ +D P + +S++Q +
Sbjct: 439 TLDDFRSGRKNLIIATDVLEEGIDLSACSVVVCYDKPPNLKSFIQRRG 486
>gi|70981901|ref|XP_746479.1| RNA helicase/RNAse III [Aspergillus fumigatus Af293]
gi|66844102|gb|EAL84441.1| RNA helicase/RNAse III, putative [Aspergillus fumigatus Af293]
Length = 1384
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 35/48 (72%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G N+++ATDVLEEGID+ +C++V+ +D P + +S++Q +
Sbjct: 439 TLDDFRSGRKNLIIATDVLEEGIDLSACSVVVCYDKPPNLKSFIQRRG 486
>gi|449549195|gb|EMD40161.1| hypothetical protein CERSUDRAFT_112373 [Ceriporiopsis subvermispora
B]
Length = 1511
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G N++++T V EEGIDIQ+C VI+FDPP + S+ QS+
Sbjct: 472 TLRDFKIGDKNLIISTSVAEEGIDIQACGSVIRFDPPVNMVSWAQSRG 519
>gi|302819693|ref|XP_002991516.1| hypothetical protein SELMODRAFT_448444 [Selaginella moellendorffii]
gi|300140718|gb|EFJ07438.1| hypothetical protein SELMODRAFT_448444 [Selaginella moellendorffii]
Length = 1719
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + +F G N+L+AT V EEG+D+Q+C VI+FD Q RS+VQS+
Sbjct: 769 EVLDAFAGGKLNLLIATSVAEEGLDVQACCAVIRFDVCQTLRSHVQSRG 817
>gi|449543396|gb|EMD34372.1| hypothetical protein CERSUDRAFT_55073 [Ceriporiopsis subvermispora
B]
Length = 1702
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F N+LVAT V EEG+D +C+LVI+FDP QH Y+QS+
Sbjct: 442 FREKQINLLVATSVAEEGLDFPACDLVIRFDPLQHMVGYLQSRG 485
>gi|357140713|ref|XP_003571908.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
3b-like [Brachypodium distachyon]
Length = 1414
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G N+L TDV EEGID+ +C+ VI+FD P+ SYVQS+
Sbjct: 397 TLDLFRAGKVNLLFTTDVTEEGIDVPNCSCVIRFDLPRTVSSYVQSRG 444
>gi|327355811|gb|EGE84668.1| hypothetical protein BDDG_07613 [Ajellomyces dermatitidis ATCC
18188]
Length = 1509
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQIL 64
T+L F +G N L AT V EEG+DI CNLVI+FD YVQS+ RH + I
Sbjct: 492 TLLKFRKGELNCLFATSVAEEGLDIPDCNLVIRFDLNSTMIQYVQSRG--RARH-SHSIY 548
Query: 65 SQYPKSERYLQYNS-PKINRLLQLLRRYN---PDQRTI 98
+ + + + +S ++ R ++RR+ P+ R I
Sbjct: 549 AHMVERDNLIHSSSVEEVQRAENIMRRFCEALPEDRII 586
>gi|389740167|gb|EIM81358.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 1537
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 34/48 (70%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G N++VAT V EEG+D+Q+CN V+++DPP + S+ QS+
Sbjct: 463 TLRDFKVGDLNLIVATAVAEEGLDVQACNNVVRWDPPMNMVSWAQSRG 510
>gi|239607869|gb|EEQ84856.1| dicer-like protein [Ajellomyces dermatitidis ER-3]
Length = 1522
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQIL 64
T+L F +G N L AT V EEG+DI CNLVI+FD YVQS+ RH + I
Sbjct: 489 TLLKFRKGELNCLFATSVAEEGLDIPDCNLVIRFDLNSTMIQYVQSRG--RARH-SHSIY 545
Query: 65 SQYPKSERYLQYNS-PKINRLLQLLRRYN---PDQRTI 98
+ + + + +S ++ R ++RR+ P+ R I
Sbjct: 546 AHMVERDNLIHSSSVEEVQRAENIMRRFCEALPEDRII 583
>gi|261198280|ref|XP_002625542.1| dicer-like protein [Ajellomyces dermatitidis SLH14081]
gi|239595505|gb|EEQ78086.1| dicer-like protein [Ajellomyces dermatitidis SLH14081]
Length = 1522
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQIL 64
T+L F +G N L AT V EEG+DI CNLVI+FD YVQS+ RH + I
Sbjct: 489 TLLKFRKGELNCLFATSVAEEGLDIPDCNLVIRFDLNSTMIQYVQSRG--RARH-SHSIY 545
Query: 65 SQYPKSERYLQYNS-PKINRLLQLLRRYN---PDQRTI 98
+ + + + +S ++ R ++RR+ P+ R I
Sbjct: 546 AHMVERDNLIHSSSVEEVQRAENIMRRFCEALPEDRII 583
>gi|189199432|ref|XP_001936053.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983152|gb|EDU48640.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1439
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 34/44 (77%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV 48
T+ F GI N+++AT VLEEGID+ SC+LVI F+ P++ +S+V
Sbjct: 460 TLDDFRAGIINLVLATSVLEEGIDVSSCHLVICFEQPKNLKSFV 503
>gi|170099920|ref|XP_001881178.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643857|gb|EDR08108.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1469
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA--------FTVV 56
T+ F G N++V+T V EEGIDIQ+C VI++DPP + S+ QS+ FTV+
Sbjct: 458 TIADFKIGEKNLIVSTSVAEEGIDIQACGSVIRWDPPPNMASWAQSRGRARRQRSTFTVM 517
Query: 57 RH---KAEQILSQYPKSERYL--QYNSP 79
K ++ ++++ ER + YN P
Sbjct: 518 FEDGSKNQKDVAKWENLERQMVALYNDP 545
>gi|391345092|ref|XP_003746827.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1446
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ +F G+ N+LVAT V+EEG+D+ CNL+++ + + RSYVQ +
Sbjct: 441 TLENFRTGVHNVLVATSVIEEGVDVPQCNLIVRMNGDMNFRSYVQGRG 488
>gi|403419584|emb|CCM06284.1| predicted protein [Fibroporia radiculosa]
Length = 1482
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ T+ F G N++++T V EEGIDIQ+C VI+FD P +T S+ QS+
Sbjct: 465 LDTLAEFRSGEKNLIISTSVAEEGIDIQACGSVIRFDLPPNTVSWAQSRG 514
>gi|224088236|ref|XP_002308384.1| dicer-like protein [Populus trichocarpa]
gi|222854360|gb|EEE91907.1| dicer-like protein [Populus trichocarpa]
Length = 1588
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+L+AT V EEG+DIQ+C LVI+FD P+ S++QS+
Sbjct: 487 FRTGKLNLLLATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRG 530
>gi|195425457|ref|XP_002061021.1| GK10670 [Drosophila willistoni]
gi|194157106|gb|EDW72007.1| GK10670 [Drosophila willistoni]
Length = 1720
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN VI DP + SYVQ+K
Sbjct: 454 FRDGEANLMICSSVLEEGIDVQACNYVIILDPLKTFNSYVQTKG 497
>gi|402225633|gb|EJU05694.1| hypothetical protein DACRYDRAFT_113750 [Dacryopinax sp. DJM-731
SS1]
Length = 1596
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G N+LVAT V EEG+D Q CNLVI+FD + SY QS R +A Q S Y
Sbjct: 441 FRDGKANLLVATSVAEEGLDFQPCNLVIRFDALKTMVSYAQS------RGRARQKASTYI 494
Query: 69 KSERYLQYNSPKINRLLQ 86
R + + K + ++
Sbjct: 495 IMRRSVPTEADKYTQFMR 512
>gi|400595165|gb|EJP62972.1| RNase3 domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 1465
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQS-----KAFTVVR 57
+Q + F G TN L AT V EEG+DI +C+LVI+FD Y+QS KA +V
Sbjct: 460 MQKLNDFKHGNTNCLFATSVAEEGLDIPACDLVIRFDMCISAIQYIQSRGRARKASSVYI 519
Query: 58 HKAEQILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQRTIIFCQR 103
EQ +Q+ R + +++ + R Q L P R+I +R
Sbjct: 520 TMMEQDNNQHLNRFRNVTFDAQCLRRFCQKL----PPDRSIGIYER 561
>gi|307190121|gb|EFN74275.1| Endoribonuclease Dcr-1 [Camponotus floridanus]
Length = 1976
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 31/38 (81%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+AT +LEEGIDI CN V+++D P++ +SYVQ K+
Sbjct: 514 NLLIATSILEEGIDIPKCNFVMRYDFPKNYQSYVQCKS 551
>gi|408393408|gb|EKJ72672.1| hypothetical protein FPSE_07072 [Fusarium pseudograminearum CS3096]
Length = 1510
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQIL 64
T+ +F G+ N L AT V EEGIDI SC+LVI+FD YVQSK RH++ + +
Sbjct: 492 TLKNFRDGMINCLFATSVAEEGIDIPSCDLVIRFDLYTSVIQYVQSKG--RARHESSRYI 549
Query: 65 S 65
+
Sbjct: 550 T 550
>gi|406863987|gb|EKD17033.1| RNase3 domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1477
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
T+ F G N+ +AT VLEEGID+ +CN VI F P + +S+VQ + R +
Sbjct: 499 HTLSRFKSGQINLAIATSVLEEGIDVPACNTVICFQAPANIKSFVQRRGRARHRDSRLVL 558
Query: 64 LSQY 67
LS Y
Sbjct: 559 LSDY 562
>gi|449505410|ref|XP_004162460.1| PREDICTED: LOW QUALITY PROTEIN: dicer-like protein 4-like
[Cucumis sativus]
Length = 1228
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
G N+L+AT V EEG+DIQ+C LVI+FD P+ S++QS+
Sbjct: 49 GALNLLIATKVGEEGLDIQTCCLVIRFDLPETVSSFIQSRG 89
>gi|307195788|gb|EFN77602.1| Endoribonuclease Dcr-1 [Harpegnathos saltator]
Length = 1807
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 31/38 (81%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+AT +LEEGIDI CN V+++D P++ +SYVQ K+
Sbjct: 362 NLLIATSILEEGIDIPKCNFVMRYDFPKNYQSYVQCKS 399
>gi|358058780|dbj|GAA95743.1| hypothetical protein E5Q_02400 [Mixia osmundae IAM 14324]
Length = 1610
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQY 67
S G N L AT V EEG+D+ SCNL+++FDP Y+QS+ + +L++
Sbjct: 527 SIREGRCNTLFATSVAEEGLDLSSCNLIVRFDPVSTLVGYIQSRGRARAVNSDYLVLAEA 586
Query: 68 PKSERY 73
SE Y
Sbjct: 587 DTSEEY 592
>gi|157120736|ref|XP_001659747.1| dicer-1 [Aedes aegypti]
gi|108883036|gb|EAT47261.1| AAEL001612-PA [Aedes aegypti]
Length = 2193
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYPKSE 71
N+L+ T VLEEGID+ CNLVI+++ P RSYVQ K A IL PKS+
Sbjct: 565 NLLIGTSVLEEGIDLPKCNLVIRWNEPVSYRSYVQCKG-RARASTAYHILFVTPKSD 620
>gi|57236094|gb|AAW48724.1| dicer-1 [Aedes aegypti]
Length = 2192
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYPKSE 71
N+L+ T VLEEGID+ CNLVI+++ P RSYVQ K A IL PKS+
Sbjct: 565 NLLIGTSVLEEGIDLPKCNLVIRWNEPVSYRSYVQCKG-RARASTAYHILFVTPKSD 620
>gi|414871004|tpg|DAA49561.1| TPA: hypothetical protein ZEAMMB73_299457, partial [Zea mays]
Length = 1199
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G N+L TDV EEGID+ +C+ VI+FD P+ SYVQS+
Sbjct: 87 TLDLFRAGKVNLLFTTDVTEEGIDVPNCSCVIRFDLPRTVCSYVQSRG 134
>gi|63054443|ref|NP_588215.2| dicer [Schizosaccharomyces pombe 972h-]
gi|1351642|sp|Q09884.1|DCR1_SCHPO RecName: Full=Protein Dicer; AltName: Full=Cell cycle control
protein dcr1; AltName: Full=RNA interference pathway
protein dcr1; Includes: RecName: Full=Endoribonuclease
dcr1; Includes: RecName: Full=ATP-dependent helicase
dcr1
gi|157310516|emb|CAB41233.2| dicer [Schizosaccharomyces pombe]
Length = 1374
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G N+L+AT V EEGID+ SCNLVI+F+ + YVQS+
Sbjct: 415 TLHKFKTGKYNVLIATAVAEEGIDVPSCNLVIRFNICRTVTQYVQSRG 462
>gi|170593727|ref|XP_001901615.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
gi|158590559|gb|EDP29174.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
Length = 904
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
+FN+G +LVAT V EEG+DI +CNL+IK++ RS +Q + +H +L+
Sbjct: 611 NFNQGTLKVLVATSVAEEGLDISACNLIIKYNNTGSERSLIQRRGRARAKHSKSILLA 668
>gi|224000281|ref|XP_002289813.1| RNA helicase [Thalassiosira pseudonana CCMP1335]
gi|220975021|gb|EED93350.1| RNA helicase [Thalassiosira pseudonana CCMP1335]
Length = 466
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFT 54
T+ +F G N+LVATDV GIDI+ +LVI+F+PP+ +YV T
Sbjct: 292 TLAAFRAGAFNVLVATDVAARGIDIKDVDLVIQFEPPRDVDTYVHRSGRT 341
>gi|379987676|gb|AFD22618.1| dicer-like 1 protein, partial [Nicotiana attenuata]
Length = 1690
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G N+LVAT V EEG+DI+ CN+VI+FD + +Y+QS+
Sbjct: 499 TIAKFRDGRMNLLVATSVAEEGLDIRQCNVVIRFDLAKTILAYIQSRG 546
>gi|115292171|emb|CAK32533.1| putative dicer-like protein [Mucor circinelloides]
Length = 1529
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F G N+L+AT+V EEG+DIQ+CN VI+FD + +Y+QS+
Sbjct: 465 EVIAKFRAGELNLLIATNVAEEGLDIQACNYVIRFDLFKTVIAYIQSRG 513
>gi|414871006|tpg|DAA49563.1| TPA: hypothetical protein ZEAMMB73_299457, partial [Zea mays]
Length = 1517
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G N+L TDV EEGID+ +C+ VI+FD P+ SYVQS+
Sbjct: 405 TLDLFRAGKVNLLFTTDVTEEGIDVPNCSCVIRFDLPRTVCSYVQSRG 452
>gi|242019168|ref|XP_002430037.1| dicer-1, putative [Pediculus humanus corporis]
gi|212515099|gb|EEB17299.1| dicer-1, putative [Pediculus humanus corporis]
Length = 701
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ M G N++ AT++LEEGID+ +CNLVI FD P+ SY+QS+
Sbjct: 393 EIMKRMASGELNLIFATNILEEGIDLPACNLVISFDFPKGYSSYIQSRG 441
>gi|414871005|tpg|DAA49562.1| TPA: hypothetical protein ZEAMMB73_299457 [Zea mays]
Length = 1440
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G N+L TDV EEGID+ +C+ VI+FD P+ SYVQS+
Sbjct: 405 TLDLFRAGKVNLLFTTDVTEEGIDVPNCSCVIRFDLPRTVCSYVQSRG 452
>gi|332020119|gb|EGI60563.1| Endoribonuclease Dcr-1 [Acromyrmex echinatior]
Length = 1979
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 31/38 (81%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+AT +LEEGIDI CN V+++D P++ +SY+Q K+
Sbjct: 514 NLLIATSILEEGIDIPKCNFVMRYDFPKNYQSYIQCKS 551
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 50 SKAFTVVRHKAEQILSQYPKSERYLQYNSPKINRLLQLLRRYNP 93
+ F +R + + ER QY++PK++RLLQ+L+ Y P
Sbjct: 325 TSVFIKIRALCDNEFQHLSEKERIYQYSTPKVHRLLQILKIYTP 368
>gi|238497846|ref|XP_002380158.1| RNA helicase/RNAse III, putative [Aspergillus flavus NRRL3357]
gi|220693432|gb|EED49777.1| RNA helicase/RNAse III, putative [Aspergillus flavus NRRL3357]
Length = 1339
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TM F G N++V T VLEEGID+ +C +V+ FD P + +S++Q +
Sbjct: 440 TMDDFRSGRKNLIVTTSVLEEGIDVTACRVVVCFDKPANLKSFIQRRG 487
>gi|169768544|ref|XP_001818742.1| ATP-dependent helicase dcl2 [Aspergillus oryzae RIB40]
gi|121804870|sp|Q2UNX5.1|DCL2_ASPOR RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
gi|83766600|dbj|BAE56740.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868391|gb|EIT77606.1| dsRNA-specific nuclease Dicer [Aspergillus oryzae 3.042]
Length = 1377
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TM F G N++V T VLEEGID+ +C +V+ FD P + +S++Q +
Sbjct: 440 TMDDFRSGRKNLIVTTSVLEEGIDVTACRVVVCFDKPANLKSFIQRRG 487
>gi|402590938|gb|EJW84868.1| hypothetical protein WUBG_04220 [Wuchereria bancrofti]
Length = 596
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
+FN+G +LVAT V EEG+DI +CNL+IK++ RS +Q + +H +L+
Sbjct: 303 NFNQGTLKVLVATSVAEEGLDISACNLIIKYNNTGSERSLIQRRGRARAKHSKSILLA 360
>gi|297610684|ref|NP_001064898.2| Os10g0485600 [Oryza sativa Japonica Group]
gi|18087887|gb|AAL59041.1|AC087182_24 putative RNA helicase [Oryza sativa Japonica Group]
gi|31432753|gb|AAP54346.1| Type III restriction enzyme, res subunit family protein, expressed
[Oryza sativa Japonica Group]
gi|255679506|dbj|BAF26812.2| Os10g0485600 [Oryza sativa Japonica Group]
Length = 1458
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G N+L TDV EEG+D+ +C+ VI+FD P+ SYVQS+
Sbjct: 417 TLDLFRAGKVNLLFTTDVTEEGVDVPNCSCVIRFDLPRTVCSYVQSRG 464
>gi|158706446|sp|Q4WA22.2|DCL2_ASPFU RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
Length = 1388
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 35/48 (72%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G N+++ATDVLEEGID+ +C++V+ +D P + +S++Q +
Sbjct: 443 TLDDFRSGRKNLIIATDVLEEGIDLSACSVVVCYDKPPNLKSFIQRRG 490
>gi|393220706|gb|EJD06192.1| hypothetical protein FOMMEDRAFT_145449 [Fomitiporia mediterranea
MF3/22]
Length = 1473
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
SF G N+L+ATDV EEG+D +C LVI++D +H YVQS+
Sbjct: 432 SFRSGNLNLLIATDVGEEGLDFPACALVIRYDSVKHMVGYVQSRG 476
>gi|343791208|gb|AEM61141.1| RNase III dicer-like protein [Puccinia striiformis f. sp. tritici]
Length = 1386
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+T+ F G N+ +AT V EEG+D +SC +VI+FD + Y+QS+ R +
Sbjct: 405 KTVAKFRTGEHNLTIATSVAEEGLDFRSCRVVIRFDLITTWKGYIQSRGRARARDSEYIV 464
Query: 64 LSQYPKSERYLQYNSPKIN 82
+ S +YL ++ + N
Sbjct: 465 MLPAGSSSKYLAFSGEEDN 483
>gi|397573970|gb|EJK48957.1| hypothetical protein THAOC_32204 [Thalassiosira oceanica]
Length = 900
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFT 54
T+ +F G N+LVATDV GIDI+ +LVI+F PP+ T +YV T
Sbjct: 558 TLAAFRAGSFNVLVATDVAARGIDIKDVDLVIQFHPPRDTDTYVHRSGRT 607
>gi|357465903|ref|XP_003603236.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355492284|gb|AES73487.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 1758
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
SF G N+L TDVLEEGI + +C+ VI+FD P SY+QS+
Sbjct: 500 SFRSGKVNLLFTTDVLEEGIHVPNCSCVIRFDLPTTVCSYIQSRG 544
>gi|340054649|emb|CCC48949.1| putative ATP-dependent DEAD/H RNA helicase [Trypanosoma vivax Y486]
Length = 824
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G T +LVAT +LEEG+D+ CN VI++D RS++QS+
Sbjct: 470 FKAGATKLLVATSLLEEGLDVGRCNFVIRYDSCLTLRSFIQSRG 513
>gi|222613035|gb|EEE51167.1| hypothetical protein OsJ_31945 [Oryza sativa Japonica Group]
Length = 1570
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G N+L TDV EEG+D+ +C+ VI+FD P+ SYVQS+
Sbjct: 394 TLDLFRAGKVNLLFTTDVTEEGVDVPNCSCVIRFDLPRTVCSYVQSRG 441
>gi|72391252|ref|XP_845920.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175291|gb|AAX69436.1| hypothetical protein Tb927.7.2970 [Trypanosoma brucei]
gi|70802456|gb|AAZ12361.1| hypothetical protein Tb927.7.2970 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 824
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 8/63 (12%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA--------FTVVRHKA 60
F +G T +LVAT + EEG+DI CNLVI++D RS+VQS+ F V H
Sbjct: 477 FRKGNTRLLVATSLAEEGLDIAQCNLVIRYDSCVSLRSFVQSRGRARRRNALFIVFEHAR 536
Query: 61 EQI 63
+I
Sbjct: 537 REI 539
>gi|251764789|sp|Q7XD96.2|DCL3B_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 3b; AltName:
Full=Dicer-like protein 3b; Short=OsDCL3b
Length = 1637
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G N+L TDV EEG+D+ +C+ VI+FD P+ SYVQS+
Sbjct: 462 TLDLFRAGKVNLLFTTDVTEEGVDVPNCSCVIRFDLPRTVCSYVQSRG 509
>gi|452003006|gb|EMD95463.1| hypothetical protein COCHEDRAFT_1026333 [Cochliobolus
heterostrophus C5]
Length = 1592
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
+ T+ F RG N L AT V EEG+DI CNLV++FD + +YVQS+ RH+ +
Sbjct: 516 ILTVAKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYRTMIAYVQSRG--RARHRNSK 573
Query: 63 IL 64
L
Sbjct: 574 YL 575
>gi|302819687|ref|XP_002991513.1| hypothetical protein SELMODRAFT_429800 [Selaginella
moellendorffii]
gi|300140715|gb|EFJ07435.1| hypothetical protein SELMODRAFT_429800 [Selaginella
moellendorffii]
Length = 850
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + SF G N+L+AT V EEG+D+Q+C VI+FD Q +S+VQS+
Sbjct: 28 EVLDSFAGGKLNLLIATSVAEEGLDVQACCGVIRFDVCQTLQSHVQSRG 76
>gi|302422698|ref|XP_003009179.1| RNase3 domain-containing protein [Verticillium albo-atrum VaMs.102]
gi|261352325|gb|EEY14753.1| RNase3 domain-containing protein [Verticillium albo-atrum VaMs.102]
Length = 1510
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 30/50 (60%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
V T+ F RG N L+AT V EEGIDI C +VI+FD Y+QSK
Sbjct: 540 VMTITKFRRGEFNCLLATSVAEEGIDIADCKIVIRFDLFNSVIQYIQSKG 589
>gi|453081348|gb|EMF09397.1| dicer-like protein 1 [Mycosphaerella populorum SO2202]
Length = 1541
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVR----- 57
V T++ F +G N L AT V EEG+D+ CNL+I+FD YVQS+ R
Sbjct: 498 VMTLMRFRKGEINCLFATSVAEEGLDVPDCNLIIRFDMYTTMIQYVQSRGRARNRNSKFI 557
Query: 58 HKAEQILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQRTI 98
H E S + ++ ++Y + R +LL P+ R +
Sbjct: 558 HMIEIGNSTHSQTLNEVRYAEATMRRYCELL----PEDRKL 594
>gi|451856503|gb|EMD69794.1| hypothetical protein COCSADRAFT_341850 [Cochliobolus sativus
ND90Pr]
Length = 1575
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQIL 64
T+ F RG N L AT V EEG+DI CNLV++FD + +YVQS+ RH+ + L
Sbjct: 518 TVAKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYRTMIAYVQSRG--RARHRNSKYL 575
>gi|449682783|ref|XP_002165718.2| PREDICTED: endoribonuclease Dicer-like [Hydra magnipapillata]
Length = 1001
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+F + N+LV+T V+EEG+D++ CNLV++FD + R Y QSK
Sbjct: 255 NFKQDKFNVLVSTSVVEEGLDVRKCNLVVRFDGINNYREYAQSKG 299
>gi|189205613|ref|XP_001939141.1| endoribonuclease dcr-1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187975234|gb|EDU41860.1| endoribonuclease dcr-1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1572
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
+ T+ F RG N L AT V EEG+DI CNLV++FD + +YVQS+ RH+ +
Sbjct: 517 ILTVAKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYRTMIAYVQSRG--RARHRNSK 574
Query: 63 IL 64
L
Sbjct: 575 YL 576
>gi|330913942|ref|XP_003296428.1| hypothetical protein PTT_06534 [Pyrenophora teres f. teres 0-1]
gi|311331414|gb|EFQ95479.1| hypothetical protein PTT_06534 [Pyrenophora teres f. teres 0-1]
Length = 1572
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
+ T+ F RG N L AT V EEG+DI CNLV++FD + +YVQS+ RH+ +
Sbjct: 517 ILTVAKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYRTMIAYVQSRG--RARHRNSK 574
Query: 63 IL 64
L
Sbjct: 575 YL 576
>gi|195124758|ref|XP_002006854.1| GI21295 [Drosophila mojavensis]
gi|193911922|gb|EDW10789.1| GI21295 [Drosophila mojavensis]
Length = 1728
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
F G NI++ + VLEEGID+Q+CN VI DP + YVQ+K + + I+S
Sbjct: 458 FRDGEANIMICSSVLEEGIDVQACNYVIILDPIKTFNMYVQTKGRARSKEASFMIIS 514
>gi|452839019|gb|EME40959.1| hypothetical protein DOTSEDRAFT_56023 [Dothistroma septosporum
NZE10]
Length = 1549
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 33/56 (58%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRH 58
V T++ F +G N L AT V EEG+D+ CNLVI+FD YVQS+ +H
Sbjct: 502 VMTLMKFRKGELNCLFATSVAEEGLDVPDCNLVIRFDMYNTMIQYVQSRGRARNQH 557
>gi|156553056|ref|XP_001605287.1| PREDICTED: endoribonuclease Dcr-1 [Nasonia vitripennis]
Length = 1917
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYPKSERYL 74
N+L++T +LEEGIDI CN V++F+ P++ +SYVQ K+ +L +SE Y+
Sbjct: 498 NLLISTAILEEGIDIPKCNFVMRFEFPKNYQSYVQCKSRARATDALHVLLVPEIESEVYI 557
Query: 75 Q 75
Q
Sbjct: 558 Q 558
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 31/46 (67%)
Query: 48 VQSKAFTVVRHKAEQILSQYPKSERYLQYNSPKINRLLQLLRRYNP 93
V + F +R + I S ++E+ L++++PKI+RL+++L+ ++P
Sbjct: 323 VVATLFLKIRAYCDDIFSGLTEAEKILKFSTPKIHRLIEVLKTFSP 368
>gi|156379595|ref|XP_001631542.1| predicted protein [Nematostella vectensis]
gi|156218584|gb|EDO39479.1| predicted protein [Nematostella vectensis]
Length = 78
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
SF G +L++T VLEEG+D+ CNLV++FD + +S VQS+
Sbjct: 13 SFRTGRIKLLISTSVLEEGLDVPVCNLVVRFDSTMNLKSLVQSRG 57
>gi|403171531|ref|XP_003330752.2| hypothetical protein PGTG_12289 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169221|gb|EFP86333.2| hypothetical protein PGTG_12289 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1403
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+T+ F G N+ +AT V EEG+D +SC +VI+FD + Y+QS+ R+ +
Sbjct: 426 KTVAKFRTGEHNLTIATSVAEEGLDFRSCRVVIRFDQITTWKGYIQSRGRARARNSDYIV 485
Query: 64 LSQYPKSERYLQYNS 78
+ S +YL ++
Sbjct: 486 MLPTDSSSKYLAFSG 500
>gi|255550219|ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis]
gi|223544646|gb|EEF46162.1| Ribonuclease III, putative [Ricinus communis]
Length = 1660
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+TM +F G N+L +TDVL EGI + +C+ VI FD P+ Y QS R +A Q
Sbjct: 480 ETMYAFRSGKVNLLFSTDVLREGIHVPNCSCVICFDLPKTVCCYAQS------RGRARQN 533
Query: 64 LSQY 67
SQY
Sbjct: 534 DSQY 537
>gi|154301554|ref|XP_001551189.1| hypothetical protein BC1G_10104 [Botryotinia fuckeliana B05.10]
Length = 1842
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQIL 64
TM +F G N L+AT V EEG+DI CNLV++FD Y+QS R +A I
Sbjct: 800 TMHNFRNGKINCLIATSVAEEGLDIPDCNLVVRFDLYNTVIQYIQS------RGRARHIN 853
Query: 65 SQY 67
S+Y
Sbjct: 854 SRY 856
>gi|422398915|ref|NP_001116485.2| endoribonuclease Dicer-1 [Apis mellifera]
Length = 1952
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
NIL++T +LEEGIDI CN V+++D P+ +SYVQ K+
Sbjct: 508 NILISTSILEEGIDIPKCNFVMRYDFPKTYQSYVQCKS 545
>gi|221056985|ref|XP_002259630.1| snrnp protein [Plasmodium knowlesi strain H]
gi|193809702|emb|CAQ40404.1| snrnp protein, putative [Plasmodium knowlesi strain H]
Length = 1001
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
QT+ SF G +ILVATDV GID+Q LVI FD P+ SY
Sbjct: 886 QTLNSFKNGDFDILVATDVAGRGIDVQGVKLVINFDMPKDIESYTH 931
>gi|170181362|gb|ACB11577.1| dicer-1 CG4792-PA-like protein [Apis mellifera]
Length = 1946
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
NIL++T +LEEGIDI CN V+++D P+ +SYVQ K+
Sbjct: 508 NILISTSILEEGIDIPKCNFVMRYDFPKTYQSYVQCKS 545
>gi|380025724|ref|XP_003696618.1| PREDICTED: endoribonuclease Dcr-1-like [Apis florea]
Length = 1966
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
NIL++T +LEEGIDI CN V+++D P+ +SYVQ K+
Sbjct: 508 NILISTSILEEGIDIPKCNFVMRYDFPKTYQSYVQCKS 545
>gi|359484756|ref|XP_002264486.2| PREDICTED: dicer-like protein 4 [Vitis vinifera]
Length = 1622
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 12/87 (13%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F N+LVAT V EEG+DIQ+C LVI+FD P+ S++QS+ ++ P
Sbjct: 464 FRSNELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRG-----------RARMP 512
Query: 69 KSERYLQYNSPKINRLLQLLRRYNPDQ 95
+SE +S K + + L+ + D+
Sbjct: 513 QSEYAFLVDSGK-QKEIDLIEHFKKDE 538
>gi|261329404|emb|CBH12385.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 824
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 8/63 (12%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA--------FTVVRHKA 60
F +G T +LVAT + EEG+DI CNLVI++D RS++QS+ F V H
Sbjct: 477 FRKGNTRLLVATSLAEEGLDIAQCNLVIRYDSCVSLRSFIQSRGRARRRNALFIVFEHAR 536
Query: 61 EQI 63
+I
Sbjct: 537 REI 539
>gi|296084589|emb|CBI25610.3| unnamed protein product [Vitis vinifera]
Length = 1623
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 12/87 (13%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F N+LVAT V EEG+DIQ+C LVI+FD P+ S++QS+ ++ P
Sbjct: 464 FRSNELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRG-----------RARMP 512
Query: 69 KSERYLQYNSPKINRLLQLLRRYNPDQ 95
+SE +S K + + L+ + D+
Sbjct: 513 QSEYAFLVDSGK-QKEIDLIEHFKKDE 538
>gi|449295521|gb|EMC91542.1| hypothetical protein BAUCODRAFT_570103 [Baudoinia compniacensis
UAMH 10762]
Length = 1569
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/102 (37%), Positives = 47/102 (46%), Gaps = 11/102 (10%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKA 60
M V TM F G N L T V EEG+DI CNLVI+FD + YVQS+ R +
Sbjct: 509 MQVLTMAKFRSGEINCLFCTTVAEEGLDIPDCNLVIRFDMYRTMIQYVQSRG--RARQRN 566
Query: 61 EQILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQRTIIFCQ 102
+ L K NS LLQ+ + +R FCQ
Sbjct: 567 SKFLHMVEKG------NSVHAELLLQVRAQERAMRR---FCQ 599
>gi|302765743|ref|XP_002966292.1| hypothetical protein SELMODRAFT_86110 [Selaginella moellendorffii]
gi|300165712|gb|EFJ32319.1| hypothetical protein SELMODRAFT_86110 [Selaginella moellendorffii]
Length = 1730
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
++ F G N+LVAT V EEG+DI+ CN+V++FD + +Y+QS+
Sbjct: 548 SLSKFRDGSLNVLVATSVAEEGLDIRQCNVVVRFDLAKTVLAYIQSRG 595
>gi|302793023|ref|XP_002978277.1| hypothetical protein SELMODRAFT_108314 [Selaginella moellendorffii]
gi|300154298|gb|EFJ20934.1| hypothetical protein SELMODRAFT_108314 [Selaginella moellendorffii]
Length = 1728
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
++ F G N+LVAT V EEG+DI+ CN+V++FD + +Y+QS+
Sbjct: 548 SLSKFRDGSLNVLVATSVAEEGLDIRQCNVVVRFDLAKTVLAYIQSRG 595
>gi|328865213|gb|EGG13599.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 760
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
+F G N++V T+VLEEG+D+ CNLVI+ D P + +QS+ RH+ + ++
Sbjct: 579 AFRTGKANVVVTTNVLEEGLDVPECNLVIRIDAPSTVTALIQSRGR--ARHRNSEFVA 634
>gi|281206201|gb|EFA80390.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 804
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N++VAT VLEEG+D+ CN+VI+ D P +Y QS+
Sbjct: 615 FRSGQHNVIVATAVLEEGLDVPECNVVIRIDSPATVTAYTQSRG 658
>gi|168010516|ref|XP_001757950.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
gi|162690827|gb|EDQ77192.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
Length = 1662
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+T+ F G +LVAT V EEG+DI+ CN+VI+FD + +Y+QS+
Sbjct: 458 ETISQFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 506
>gi|157285009|gb|ABV31244.1| dicer-like 1 [Physcomitrella patens]
Length = 1662
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+T+ F G +LVAT V EEG+DI+ CN+VI+FD + +Y+QS+
Sbjct: 458 ETISQFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 506
>gi|340960215|gb|EGS21396.1| hypothetical protein CTHT_0032530 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1596
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
V+T++ F +G+ N + AT V EEG+DI CN++I++D + Y+QS+
Sbjct: 534 VRTIIKFRKGVLNCIFATSVAEEGLDIPDCNVIIRYDLNETLIQYIQSRG 583
>gi|281207108|gb|EFA81291.1| RNA-directed RNA polymerase [Polysphondylium pallidum PN500]
Length = 2852
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
M+ F G + +LVAT VLEEGID+ +CN V+ FD RS +Q +
Sbjct: 829 MVKFREGQSKLLVATSVLEEGIDVNTCNFVLCFDDDLDMRSMIQRRG 875
>gi|389633725|ref|XP_003714515.1| dicer-like protein 1 [Magnaporthe oryzae 70-15]
gi|158706447|sp|A4RKC3.2|DCL1_MAGO7 RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL1; Includes: RecName:
Full=ATP-dependent helicase DCL1
gi|351646848|gb|EHA54708.1| dicer-like protein 1 [Magnaporthe oryzae 70-15]
Length = 1591
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
QT+ F G N L AT + EEG+DI CN+VI+FD T Y+QS+ +R+
Sbjct: 512 QTVSRFRDGEINCLFATSIAEEGLDIPGCNVVIRFDLHGTTIQYIQSRGRARMRNSWFIH 571
Query: 64 LSQYPKSERYLQYNSPKIN 82
++++ E ++ ++N
Sbjct: 572 MTEFGNPEHNRRWFQDRVN 590
>gi|440468299|gb|ELQ37466.1| RNase3 domain-containing protein [Magnaporthe oryzae Y34]
gi|440485699|gb|ELQ65629.1| RNase3 domain-containing protein [Magnaporthe oryzae P131]
Length = 1658
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
QT+ F G N L AT + EEG+DI CN+VI+FD T Y+QS+ +R+
Sbjct: 512 QTVSRFRDGEINCLFATSIAEEGLDIPGCNVVIRFDLHGTTIQYIQSRGRARMRNSWFIH 571
Query: 64 LSQYPKSERYLQYNSPKIN 82
++++ E ++ ++N
Sbjct: 572 MTEFGNPEHNRRWFQDRVN 590
>gi|281205109|gb|EFA79302.1| hypothetical protein PPL_07720 [Polysphondylium pallidum PN500]
Length = 3481
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 11/89 (12%)
Query: 16 ILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYPKSERYLQ 75
+LVAT VLEEGIDI +CNL+I FD RS +Q R +A S++ + Q
Sbjct: 688 LLVATSVLEEGIDIPACNLIICFDDDLQLRSLIQR------RGRARSANSKF---YVFKQ 738
Query: 76 YNSPKINRLLQLLRRYNPDQRTIIFCQRR 104
Y+ P NRL L R Q+TI+ R+
Sbjct: 739 YSDP--NRLKNLAYREVSMQKTIVSLNRK 765
>gi|414864448|tpg|DAA43005.1| TPA: hypothetical protein ZEAMMB73_941906 [Zea mays]
Length = 1307
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G +LVAT V EEG+DI+ CN+VI+FD + +Y+QS+
Sbjct: 117 TITKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 164
>gi|356504203|ref|XP_003520888.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
Length = 1944
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G +LVAT V EEG+DI+ CN+VI+FD + +Y+QS+
Sbjct: 758 TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 805
>gi|356571277|ref|XP_003553805.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
Length = 1942
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G +LVAT V EEG+DI+ CN+VI+FD + +Y+QS+
Sbjct: 756 TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 803
>gi|440632208|gb|ELR02127.1| hypothetical protein GMDG_05286 [Geomyces destructans 20631-21]
Length = 1377
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ T+ F + N ++AT VLEEGIDI +CN+VI F+ P + +S++Q +
Sbjct: 438 MDTLDCFRKKDKNFIIATSVLEEGIDISACNIVICFNKPPNLKSFIQRRG 487
>gi|158706448|sp|Q0UI93.2|DCL1_PHANO RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL1; Includes: RecName:
Full=ATP-dependent helicase DCL1
Length = 1522
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
+ T+ F RG N L AT V EEG+DI CNLV++FD + YVQS+ RH+ +
Sbjct: 469 ILTLQKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYRTMIGYVQSRG--RARHRNSK 526
Query: 63 IL 64
L
Sbjct: 527 YL 528
>gi|326481629|gb|EGE05639.1| hypothetical protein TEQG_04648 [Trichophyton equinum CBS 127.97]
Length = 1519
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+++F +G N L AT V EEG+DIQ CNL+++FD Y+QS+
Sbjct: 508 VIAFRKGEINCLFATSVAEEGLDIQDCNLIVRFDLYSTLIQYIQSRG 554
>gi|156393452|ref|XP_001636342.1| predicted protein [Nematostella vectensis]
gi|156223444|gb|EDO44279.1| predicted protein [Nematostella vectensis]
Length = 672
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQY 67
F +G+ NIL+AT V EEG+DI+ C+ VI++D + S Q++ R +A+Q Y
Sbjct: 407 EFKKGVVNILIATSVAEEGLDIKDCSFVIRYDTYGNEISSTQARG----RIRADQGQYVY 462
Query: 68 PKSERYLQYNSPKINRLLQLL 88
R + K+N+ ++L
Sbjct: 463 LADARSKGHEREKLNQYREIL 483
>gi|296809942|ref|XP_002845309.1| dicer-like protein 1 [Arthroderma otae CBS 113480]
gi|238842697|gb|EEQ32359.1| dicer-like protein 1 [Arthroderma otae CBS 113480]
Length = 1521
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+++F +G N L AT V EEG+DIQ CNL+++FD Y+QS+
Sbjct: 510 VIAFRKGEINCLFATSVAEEGLDIQDCNLIVRFDLYSTLIQYIQSRG 556
>gi|238605177|ref|XP_002396386.1| hypothetical protein MPER_03394 [Moniliophthora perniciosa FA553]
gi|215468863|gb|EEB97316.1| hypothetical protein MPER_03394 [Moniliophthora perniciosa FA553]
Length = 175
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 7 LSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ F G N++V+T V EEGID+Q+C VI++D P + S+ QS+
Sbjct: 1 MDFKIGEKNLIVSTAVAEEGIDVQACGCVIRWDLPPNMASWAQSRG 46
>gi|408394282|gb|EKJ73491.1| hypothetical protein FPSE_06330 [Fusarium pseudograminearum CS3096]
Length = 1451
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G N+LV+T VLEEGID+ CNLVI FD +S++Q +
Sbjct: 501 TLRDFKTGAINLLVSTSVLEEGIDVAVCNLVICFDETTTLKSHIQRRG 548
>gi|392585234|gb|EIW74574.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 1534
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+T+ SF G N+LVAT V EEG+DIQ+C V+++D P + S+ QS+
Sbjct: 487 ETLGSFRTGEFNVLVATSVAEEGLDIQACCNVVRWDVPNNMVSWAQSRG 535
>gi|326472405|gb|EGD96414.1| dicer [Trichophyton tonsurans CBS 112818]
Length = 1519
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+++F +G N L AT V EEG+DIQ CNL+++FD Y+QS+
Sbjct: 508 VIAFRKGEINCLFATSVAEEGLDIQDCNLIVRFDLYSTLIQYIQSRG 554
>gi|327297344|ref|XP_003233366.1| dicer-like protein 1 [Trichophyton rubrum CBS 118892]
gi|326464672|gb|EGD90125.1| dicer-like protein 1 [Trichophyton rubrum CBS 118892]
Length = 1519
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+++F +G N L AT V EEG+DIQ CNL+++FD Y+QS+
Sbjct: 508 VIAFRKGEINCLFATSVAEEGLDIQDCNLIVRFDLYSTLIQYIQSRG 554
>gi|225453660|ref|XP_002268369.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Vitis vinifera]
Length = 1971
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G +LVAT V EEG+DI+ CN+VI+FD + +Y+QS+
Sbjct: 782 TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 829
>gi|195023643|ref|XP_001985724.1| GH20958 [Drosophila grimshawi]
gi|193901724|gb|EDW00591.1| GH20958 [Drosophila grimshawi]
Length = 1713
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G N++V + VLEEGID+Q+CN V+ DP + YVQ+K + + + S
Sbjct: 445 FRDGEANMMVCSSVLEEGIDVQACNYVMILDPIKTFNMYVQTKGRARAKDASFVLFSS-- 502
Query: 69 KSERYLQYNSPKINRLLQLLRR 90
+ N PKI+ +Q R+
Sbjct: 503 ------ELNKPKISLQIQQYRQ 518
>gi|169610828|ref|XP_001798832.1| hypothetical protein SNOG_08521 [Phaeosphaeria nodorum SN15]
gi|160702165|gb|EAT83689.2| hypothetical protein SNOG_08521 [Phaeosphaeria nodorum SN15]
Length = 1443
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
+ T+ F RG N L AT V EEG+DI CNLV++FD + YVQS+ RH+ +
Sbjct: 397 ILTLQKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYRTMIGYVQSRG--RARHRNSK 454
Query: 63 IL 64
L
Sbjct: 455 YL 456
>gi|315044595|ref|XP_003171673.1| hypothetical protein MGYG_06219 [Arthroderma gypseum CBS 118893]
gi|311344016|gb|EFR03219.1| hypothetical protein MGYG_06219 [Arthroderma gypseum CBS 118893]
Length = 1518
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+++F +G N L AT V EEG+DIQ CNL+++FD Y+QS+
Sbjct: 508 VIAFRKGEINCLFATSVAEEGLDIQDCNLIVRFDLYSTLIQYIQSRG 554
>gi|46117132|ref|XP_384584.1| hypothetical protein FG04408.1 [Gibberella zeae PH-1]
Length = 1451
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G N+LV+T VLEEGID+ CNLVI FD +S++Q +
Sbjct: 501 TLRDFKTGAINLLVSTSVLEEGIDVAVCNLVICFDETTTLKSHIQRRG 548
>gi|145489315|ref|XP_001430660.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74830695|emb|CAI39097.1| Dicer-like ribonuclease with mutated helicase and Rnase III domains
[Paramecium tetraurelia]
gi|124397759|emb|CAK63262.1| unnamed protein product [Paramecium tetraurelia]
Length = 1596
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F +G IL++T V EEGIDI CN VI F+P +++YVQ K
Sbjct: 619 FRQGKIKILISTSVAEEGIDIPMCNYVIGFNPISSSKAYVQMKG 662
>gi|156032684|ref|XP_001585179.1| hypothetical protein SS1G_13747 [Sclerotinia sclerotiorum 1980]
gi|154699150|gb|EDN98888.1| hypothetical protein SS1G_13747 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1867
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQIL 64
TM F G N L+AT V EEG+DI CNLV++FD Y+QS R +A +
Sbjct: 834 TMHDFRNGKINCLIATSVAEEGLDIPDCNLVVRFDLYSTVIQYIQS------RGRARHVN 887
Query: 65 SQY 67
S+Y
Sbjct: 888 SRY 890
>gi|325190800|emb|CCA25291.1| RNAdependent RNA Polymerase1 (RDR1) putative [Albugo laibachii
Nc14]
Length = 768
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQIL-SQY 67
F +G +L+AT+VLEEGID+ C+ VI+FD +S +QS+ ++ + IL +Q
Sbjct: 532 FRQGQIRLLIATNVLEEGIDVPECSFVIRFDGVAGVKSLIQSRGRARCKYGSFMILCTQK 591
Query: 68 PKSER----YLQYNSPKINRLL 85
K+++ Y + N RLL
Sbjct: 592 EKTKQEKLLYTERNMVATARLL 613
>gi|255548081|ref|XP_002515097.1| dicer-1, putative [Ricinus communis]
gi|223545577|gb|EEF47081.1| dicer-1, putative [Ricinus communis]
Length = 1543
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G +LVAT V EEG+DI+ CN+VI+FD + +Y+QS+
Sbjct: 351 TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 398
>gi|388578850|gb|EIM19183.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 430
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
F RG +L+ATDVL GID+Q+ NLV+ +D PQ SYV
Sbjct: 276 FRRGDVWVLIATDVLARGIDVQAINLVLNYDFPQSPASYVH 316
>gi|288928387|ref|ZP_06422234.1| ATP-dependent RNA helicase DeaD [Prevotella sp. oral taxon 317 str.
F0108]
gi|288331221|gb|EFC69805.1| ATP-dependent RNA helicase DeaD [Prevotella sp. oral taxon 317 str.
F0108]
Length = 447
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
Q M F G T++LVATD+L GIDI +VI +D P YV
Sbjct: 286 QVMFKFKSGATDVLVATDILSRGIDIDDITMVINYDVPHDVEDYVH 331
>gi|302896162|ref|XP_003046961.1| hypothetical protein NECHADRAFT_95309 [Nectria haematococca mpVI
77-13-4]
gi|256727889|gb|EEU41248.1| hypothetical protein NECHADRAFT_95309 [Nectria haematococca mpVI
77-13-4]
Length = 1452
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
V T+ F RG N L AT V EEGID+ C+LVI+FD Y+QSK +A Q
Sbjct: 436 VVTLQKFKRGSINCLFATTVAEEGIDVPDCDLVIRFDLYNSVIQYLQSKG------RARQ 489
Query: 63 ILSQY 67
S+Y
Sbjct: 490 SNSRY 494
>gi|357114316|ref|XP_003558946.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Brachypodium
distachyon]
Length = 1888
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G +LVAT V EEG+DI+ CN+VI+FD + +Y+QS+
Sbjct: 695 TIAKFRDGRITLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 742
>gi|392967949|ref|ZP_10333365.1| DEAD/DEAH box helicase domain protein [Fibrisoma limi BUZ 3]
gi|387842311|emb|CCH55419.1| DEAD/DEAH box helicase domain protein [Fibrisoma limi BUZ 3]
Length = 663
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 33/68 (48%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
M F G TNILVATDV GID+ + VI FD P YV T K+ + S
Sbjct: 332 MSKFRAGTTNILVATDVAARGIDVDDVDAVINFDIPLDEEYYVHRIGRTGRAGKSGRAFS 391
Query: 66 QYPKSERY 73
+ E+Y
Sbjct: 392 LVGRDEKY 399
>gi|451996502|gb|EMD88969.1| hypothetical protein COCHEDRAFT_1143131 [Cochliobolus
heterostrophus C5]
Length = 1426
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 4 QTMLS-FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV 48
QT+L F GI N+++AT VLEEGIDI SC+LV+ F+ P+ + +V
Sbjct: 454 QTVLDDFKAGIINLVLATSVLEEGIDIPSCHLVVCFEAPKTLKGFV 499
>gi|195380844|ref|XP_002049171.1| GJ20897 [Drosophila virilis]
gi|194143968|gb|EDW60364.1| GJ20897 [Drosophila virilis]
Length = 1722
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN VI DP + YVQ+K
Sbjct: 453 FRDGEANMMICSSVLEEGIDVQACNYVIILDPIKTFNMYVQTKG 496
>gi|354485032|ref|XP_003504688.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 [Cricetulus
griseus]
Length = 679
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F GI N+LVAT V EEG+DI CN+V+++ + S VQ++ R +A+Q + +
Sbjct: 428 FRDGIVNLLVATSVAEEGLDIAQCNVVVRYGLLTNEISMVQARG----RARADQSVYSFV 483
Query: 69 KSERYLQYNSPKINRLLQLL 88
+E + N L+LL
Sbjct: 484 ATEGSRELQRELTNEALELL 503
>gi|347968645|ref|XP_003436256.1| AGAP002836-PB [Anopheles gambiae str. PEST]
gi|333467908|gb|EGK96757.1| AGAP002836-PB [Anopheles gambiae str. PEST]
Length = 2336
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 28/38 (73%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGI++ CNLVI+++ P + RSY Q K
Sbjct: 613 NLLIGTSVLEEGIELPKCNLVIRWNSPANYRSYAQCKG 650
>gi|393238576|gb|EJD46112.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 1427
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYPKSE 71
N+L+AT V EEG+D Q+C+LVI+FD Q+ SYVQS+ RH + P+ +
Sbjct: 447 NVLLATSVAEEGLDFQACHLVIRFDGLQNLISYVQSRG--RARHANSTYVVLLPRDD 501
>gi|350423180|ref|XP_003493408.1| PREDICTED: endoribonuclease Dcr-1-like [Bombus impatiens]
Length = 1934
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 30/38 (78%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L++T +LEEGIDI CN V+++D P+ +SYVQ K+
Sbjct: 484 NLLISTSILEEGIDIPKCNFVMRYDFPKTYQSYVQCKS 521
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 50 SKAFTVVRHKAEQILSQYPKSERYLQYNSPKINRLLQLLRRYNP 93
+ FT +R + + ER +Y +PK++RLLQ+L+ Y P
Sbjct: 325 ASVFTKIRALCDNTFEVLSEKERIYKYTTPKVHRLLQILKTYTP 368
>gi|29424049|gb|AAO73809.1| dicer-1 [Anopheles gambiae]
Length = 2259
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 28/38 (73%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGI++ CNLVI+++ P + RSY Q K
Sbjct: 613 NLLIGTSVLEEGIELPKCNLVIRWNSPANYRSYAQCKG 650
>gi|194880776|ref|XP_001974538.1| GG21041 [Drosophila erecta]
gi|190657725|gb|EDV54938.1| GG21041 [Drosophila erecta]
Length = 1729
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V+ DP + YVQ+K
Sbjct: 457 FREGEANLMICSSVLEEGIDVQACNYVLILDPLKTFNMYVQTKG 500
>gi|389749088|gb|EIM90265.1| hypothetical protein STEHIDRAFT_93138 [Stereum hirsutum FP-91666
SS1]
Length = 1500
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHK 59
+ + SF + N+L+AT V EEG+D +C++V++FD QH +VQS+ RHK
Sbjct: 439 RVLESFRKRSINLLIATQVAEEGLDFPACDVVVRFDSIQHLVGFVQSRG--RARHK 492
>gi|296089027|emb|CBI38730.3| unnamed protein product [Vitis vinifera]
Length = 1474
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G +LVAT V EEG+DI+ CN+VI+FD + +Y+QS+
Sbjct: 723 TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 770
>gi|58382645|ref|XP_312076.2| AGAP002836-PA [Anopheles gambiae str. PEST]
gi|55241936|gb|EAA07793.2| AGAP002836-PA [Anopheles gambiae str. PEST]
Length = 2256
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 28/38 (73%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGI++ CNLVI+++ P + RSY Q K
Sbjct: 613 NLLIGTSVLEEGIELPKCNLVIRWNSPANYRSYAQCKG 650
>gi|383862048|ref|XP_003706496.1| PREDICTED: endoribonuclease Dcr-1-like [Megachile rotundata]
Length = 1952
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 30/38 (78%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L++T +LEEGIDI CN V+++D P+ +SYVQ K+
Sbjct: 504 NLLISTSILEEGIDIPKCNFVMRYDFPKTYQSYVQCKS 541
>gi|411170363|gb|AFW16070.1| dicer-1 [Nilaparvata lugens]
Length = 2239
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+LV T +LE+GID+ CNLV++++ P + RSY QSK
Sbjct: 777 NVLVGTSLLEDGIDLPKCNLVVRYNVPTNYRSYAQSKG 814
>gi|87240866|gb|ABD32724.1| Helicase, C-terminal; Argonaute and Dicer protein, PAZ;
Ribonuclease III, bacterial [Medicago truncatula]
Length = 1939
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G +LVAT V EEG+DI+ CN+VI+FD + +Y+QS+
Sbjct: 691 TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 738
>gi|80979123|gb|ABB54764.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V+ DP + YVQ+K
Sbjct: 446 FREGNANLMICSSVLEEGIDVQACNYVLILDPLKTFNMYVQTKG 489
>gi|303314275|ref|XP_003067146.1| Type III restriction enzyme, res subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240106814|gb|EER25001.1| Type III restriction enzyme, res subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 1487
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
V ++SF +G N L AT V EEG+DI CNL+++FD Y+QS+
Sbjct: 495 VLAVVSFRKGEVNCLFATSVAEEGLDIPDCNLIVRFDLASTLTQYIQSRG 544
>gi|80979117|gb|ABB54761.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V+ DP + YVQ+K
Sbjct: 446 FREGNANLMICSSVLEEGIDVQACNYVLILDPLKTFNMYVQTKG 489
>gi|357512663|ref|XP_003626620.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355501635|gb|AES82838.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 1965
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G +LVAT V EEG+DI+ CN+VI+FD + +Y+QS+
Sbjct: 691 TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 738
>gi|80979119|gb|ABB54762.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V+ DP + YVQ+K
Sbjct: 446 FREGNANLMICSSVLEEGIDVQACNYVLILDPLKTFNMYVQTKG 489
>gi|195487840|ref|XP_002092062.1| Dcr-2 [Drosophila yakuba]
gi|194178163|gb|EDW91774.1| Dcr-2 [Drosophila yakuba]
Length = 1730
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V+ DP + YVQ+K
Sbjct: 457 FREGNANLMICSSVLEEGIDVQACNYVLILDPLKTFNMYVQTKG 500
>gi|80979125|gb|ABB54765.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V+ DP + YVQ+K
Sbjct: 446 FREGNANLMICSSVLEEGIDVQACNYVLILDPLKTFNMYVQTKG 489
>gi|80979127|gb|ABB54766.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V+ DP + YVQ+K
Sbjct: 446 FREGNANLMICSSVLEEGIDVQACNYVLILDPLKTFNMYVQTKG 489
>gi|334187796|ref|NP_001190348.1| dicer-like protein 4 [Arabidopsis thaliana]
gi|332005448|gb|AED92831.1| dicer-like protein 4 [Arabidopsis thaliana]
Length = 1688
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+LVAT V EEG+DIQ+C LVI++D P+ S++QS+
Sbjct: 536 NLLVATKVGEEGLDIQTCCLVIRYDLPETVTSFIQSRG 573
>gi|80979131|gb|ABB54768.1| Dicer-2 [Drosophila santomea]
Length = 1719
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V+ DP + YVQ+K
Sbjct: 446 FREGNANLMICSSVLEEGIDVQACNYVLILDPLKTFNMYVQTKG 489
>gi|80979121|gb|ABB54763.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V+ DP + YVQ+K
Sbjct: 446 FREGNANLMICSSVLEEGIDVQACNYVLILDPLKTFNMYVQTKG 489
>gi|145358264|ref|NP_197532.3| dicer-like protein 4 [Arabidopsis thaliana]
gi|322510021|sp|P84634.2|DCL4_ARATH RecName: Full=Dicer-like protein 4
gi|73672051|gb|AAZ80387.1| dicer-like 4 [Arabidopsis thaliana]
gi|332005447|gb|AED92830.1| dicer-like protein 4 [Arabidopsis thaliana]
Length = 1702
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+LVAT V EEG+DIQ+C LVI++D P+ S++QS+
Sbjct: 550 NLLVATKVGEEGLDIQTCCLVIRYDLPETVTSFIQSRG 587
>gi|80979129|gb|ABB54767.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V+ DP + YVQ+K
Sbjct: 446 FREGNANLMICSSVLEEGIDVQACNYVLILDPLKTFNMYVQTKG 489
>gi|320037410|gb|EFW19347.1| hypothetical protein CPSG_03731 [Coccidioides posadasii str.
Silveira]
Length = 1465
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
V ++SF +G N L AT V EEG+DI CNL+++FD Y+QS+
Sbjct: 490 VLAVVSFRKGEVNCLFATSVAEEGLDIPDCNLIVRFDLASTLTQYIQSRG 539
>gi|125584735|gb|EAZ25399.1| hypothetical protein OsJ_09217 [Oryza sativa Japonica Group]
Length = 1883
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G +LVAT V EEG+DI+ CN+VI+FD + +Y+QS+
Sbjct: 692 TISKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 739
>gi|125542181|gb|EAY88320.1| hypothetical protein OsI_09779 [Oryza sativa Indica Group]
Length = 1883
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G +LVAT V EEG+DI+ CN+VI+FD + +Y+QS+
Sbjct: 692 TISKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 739
>gi|75330224|sp|Q8LMR2.1|DCL1_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 1; AltName:
Full=Dicer-like protein 1; Short=OsDCL1
gi|21426125|gb|AAM52322.1|AC105363_11 Putative CAF protein [Oryza sativa Japonica Group]
gi|108705906|gb|ABF93701.1| DEAD/DEAH box helicase carpel factory, putative, expressed [Oryza
sativa Japonica Group]
Length = 1883
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G +LVAT V EEG+DI+ CN+VI+FD + +Y+QS+
Sbjct: 692 TISKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 739
>gi|406864416|gb|EKD17461.1| putative Dicer-like protein 1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1827
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
V TM +F +G N L AT V EEG+D+ CNLV++FD Y+QS+ RH+ +
Sbjct: 792 VLTMGNFRKGNINCLFATSVAEEGLDVPDCNLVVRFDLYTTLIQYIQSRG--RARHQNSR 849
Query: 63 ILSQY 67
+ Y
Sbjct: 850 YIHMY 854
>gi|442570277|sp|Q1DKI1.3|DCL1_COCIM RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL1; Includes: RecName:
Full=ATP-dependent helicase DCL1
gi|392869759|gb|EJB11896.1| dicer-like protein 1 [Coccidioides immitis RS]
Length = 1500
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
V ++SF +G N L AT V EEG+DI CNL+++FD Y+QS+
Sbjct: 495 VLAVVSFRKGEVNCLFATSVAEEGLDIPDCNLIVRFDLASTLTQYIQSRG 544
>gi|284035184|ref|YP_003385114.1| DEAD/DEAH box helicase [Spirosoma linguale DSM 74]
gi|283814477|gb|ADB36315.1| DEAD/DEAH box helicase domain protein [Spirosoma linguale DSM 74]
Length = 643
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 33/68 (48%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
M F G TNILVATDV GID+ + VI FD P YV T K+ + S
Sbjct: 313 MSKFRAGTTNILVATDVAARGIDVDDVDAVINFDIPLDEEYYVHRIGRTGRAGKSGRAFS 372
Query: 66 QYPKSERY 73
+ E+Y
Sbjct: 373 FVGRDEKY 380
>gi|241896736|emb|CAZ65730.1| dicer-2 protein [Mucor circinelloides f. lusitanicus]
Length = 1608
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+L+AT+V EEG+DIQ CN+V +FD SY+QS+
Sbjct: 492 FRSGELNLLIATNVAEEGLDIQPCNVVFRFDFFHTLISYIQSRG 535
>gi|254482117|ref|ZP_05095359.1| DbpA RNA binding domain family protein [marine gamma
proteobacterium HTCC2148]
gi|214037807|gb|EEB78472.1| DbpA RNA binding domain family protein [marine gamma
proteobacterium HTCC2148]
Length = 459
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
Q ++ F + ++LVATDV G+DI +V+ F+ P+ T YV T KA
Sbjct: 283 QVLIQFRQQSCSVLVATDVAARGLDIDDLPVVVNFELPRETEVYVHRVGRTGRAGKAGLA 342
Query: 64 LSQYPKSERYLQYNSPKINRLLQ 86
LS + SE QY KI +LLQ
Sbjct: 343 LSLFADSE---QYKLEKIRQLLQ 362
>gi|158706454|sp|Q0CW42.2|DCL1_ASPTN RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1519
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ TM+ F G N L AT V EEG+DI CNLV++FD + YVQS+
Sbjct: 504 ILTMVRFRTGEINCLFATAVAEEGLDIPDCNLVVRFDLYKTLIQYVQSRG 553
>gi|396465578|ref|XP_003837397.1| similar to dicer-like protein 1 [Leptosphaeria maculans JN3]
gi|312213955|emb|CBX93957.1| similar to dicer-like protein 1 [Leptosphaeria maculans JN3]
Length = 1588
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
SF RG N + AT V EEG+DI CNLV++FD + YVQS+
Sbjct: 522 SFRRGELNCIFATSVAEEGLDIPQCNLVVRFDLYRTMIGYVQSRG 566
>gi|384500232|gb|EIE90723.1| hypothetical protein RO3G_15434 [Rhizopus delemar RA 99-880]
Length = 1239
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N L+AT+V EEG+DIQ CN VI+FD +Y+QS+
Sbjct: 131 FRSGELNFLIATNVAEEGLDIQPCNFVIRFDFFHTLIAYIQSRG 174
>gi|317037196|ref|XP_001398755.2| dicer-like protein 1 [Aspergillus niger CBS 513.88]
Length = 1493
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+++ F G N L AT V EEG+DI CNLV++FD Q YVQS+
Sbjct: 481 SLVKFRTGEINCLFATSVAEEGLDIPDCNLVVRFDLYQTLIQYVQSRG 528
>gi|158706452|sp|A2RAF3.2|DCL1_ASPNC RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1525
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+++ F G N L AT V EEG+DI CNLV++FD Q YVQS+
Sbjct: 514 SLVKFRTGEINCLFATSVAEEGLDIPDCNLVVRFDLYQTLIQYVQSRG 561
>gi|169665428|gb|ACA63429.1| dicer-like 1 protein [Chlamydomonas reinhardtii]
Length = 2243
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+F+ G N+L++T V EG+D ++CN VI DPP H +VQ
Sbjct: 760 AFSSGALNVLISTSVGAEGLDFRTCNAVIMVDPPDHVTPFVQ 801
>gi|340727238|ref|XP_003401955.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dcr-1-like [Bombus
terrestris]
Length = 1957
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 29/37 (78%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSK 51
N+L++T +LEEGIDI CN V+++D P+ +SYVQ K
Sbjct: 509 NLLISTSILEEGIDIPKCNFVMRYDFPKTYQSYVQCK 545
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 50 SKAFTVVRHKAEQILSQYPKSERYLQYNSPKINRLLQLLRRYNP 93
+ FT +R + + ER +Y +PK++RLLQ+L+ Y P
Sbjct: 325 ASVFTKIRALCDNTFEVLSEKERIYKYTTPKVHRLLQILKTYTP 368
>gi|357059925|ref|ZP_09120700.1| hypothetical protein HMPREF9332_00257 [Alloprevotella rava F0323]
gi|355377113|gb|EHG24347.1| hypothetical protein HMPREF9332_00257 [Alloprevotella rava F0323]
Length = 421
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ ML F G T+ILVATD++ GIDI +VI +D P+ YV
Sbjct: 291 EVMLKFKSGHTDILVATDIVARGIDINDIQMVINYDAPRDAEDYVH 336
>gi|242039323|ref|XP_002467056.1| hypothetical protein SORBIDRAFT_01g018890 [Sorghum bicolor]
gi|241920910|gb|EER94054.1| hypothetical protein SORBIDRAFT_01g018890 [Sorghum bicolor]
Length = 1586
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
T+ F G N+L TDV EEGID+ +C+ VI+FD P+ SYVQ
Sbjct: 398 TLDLFRAGKVNLLFTTDVTEEGIDVPNCSCVIRFDLPRTVCSYVQ 442
>gi|397615349|gb|EJK63376.1| hypothetical protein THAOC_15968 [Thalassiosira oceanica]
Length = 1692
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 14 TNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
TN+L+AT V+EEG+D+++C+ +I FD + +SY+Q K
Sbjct: 714 TNVLIATSVVEEGVDVEACSFIISFDRMKTIKSYIQMKG 752
>gi|259485853|tpe|CBF83228.1| TPA: Dicer-like protein 2 [Includes Endoribonuclease dcl2(EC
3.1.26.-);ATP-dependent helicase dcl2(EC 3.6.1.-)]
[Source:UniProtKB/Swiss-Prot;Acc:P0C5H7] [Aspergillus
nidulans FGSC A4]
Length = 1269
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
M T+ F G N++VATDVL+EGID+ +C++VI ++ P+ S++Q +
Sbjct: 243 MQPDTLDDFRYGRKNLIVATDVLKEGIDVSACSVVICYNIPKGFESFIQRRG 294
>gi|358366696|dbj|GAA83316.1| hypothetical protein AKAW_01431 [Aspergillus kawachii IFO 4308]
Length = 1404
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+++ F G N L AT V EEG+DI CNLV++FD Q YVQS+
Sbjct: 489 SLVKFRTGEINCLFATSVAEEGLDIPDCNLVVRFDLYQTLIQYVQSRG 536
>gi|290993372|ref|XP_002679307.1| dicer helicase [Naegleria gruberi]
gi|284092923|gb|EFC46563.1| dicer helicase [Naegleria gruberi]
Length = 857
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 33/45 (73%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+F +GI N L++T V EEG+D+ +C+LVI+ D + T++ +QS+
Sbjct: 481 NFRQGIVNTLISTSVAEEGLDVPACSLVIRLDGIETTKTMIQSRG 525
>gi|297812215|ref|XP_002873991.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319828|gb|EFH50250.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1693
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+LVAT V EEG+DIQ+C LVI++D P+ S++QS+
Sbjct: 543 NLLVATKVGEEGLDIQTCCLVIRYDLPETVTSFIQSRG 580
>gi|189182361|gb|ACD81882.1| dicer-like nuclease 1 [Chlamydomonas reinhardtii]
Length = 2236
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+F+ G N+L++T V EG+D ++CN VI DPP H +VQ
Sbjct: 760 AFSSGALNVLISTSVGAEGLDFRTCNAVIMVDPPDHVTPFVQ 801
>gi|158706440|sp|P0C5H7.1|DCL2_EMENI RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
Length = 1429
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
M T+ F G N++VATDVL+EGID+ +C++VI ++ P+ S++Q +
Sbjct: 403 MQPDTLDDFRYGRKNLIVATDVLKEGIDVSACSVVICYNIPKGFESFIQRRG 454
>gi|67525463|ref|XP_660793.1| hypothetical protein AN3189.2 [Aspergillus nidulans FGSC A4]
gi|40743766|gb|EAA62953.1| hypothetical protein AN3189.2 [Aspergillus nidulans FGSC A4]
Length = 1726
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
M T+ F G N++VATDVL+EGID+ +C++VI ++ P+ S++Q +
Sbjct: 700 MQPDTLDDFRYGRKNLIVATDVLKEGIDVSACSVVICYNIPKGFESFIQRRG 751
>gi|312376925|gb|EFR23878.1| hypothetical protein AND_11907 [Anopheles darlingi]
Length = 1462
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGI++ CNLVI++ P + RSY Q K
Sbjct: 704 NLLIGTSVLEEGIELPKCNLVIRWSQPSNYRSYAQCKG 741
>gi|389612037|dbj|BAM19549.1| Dead box protein 73D, partial [Papilio xuthus]
Length = 248
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 16/99 (16%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ-----------SKA 52
+ + F + N++++TD L GIDI CN V+ +DPP++ ++YV +A
Sbjct: 108 KVLEKFKQSEVNVIISTDALARGIDIPDCNYVVSYDPPRNIKTYVHRVGRTGRAGRIGRA 167
Query: 53 FTVVRHK-----AEQILSQYPKSERYLQYNSPKINRLLQ 86
T++ H EQI S L+ + + LLQ
Sbjct: 168 VTILNHNQLNMFKEQIQSSGKSEINQLEVSEESYSHLLQ 206
>gi|302772092|ref|XP_002969464.1| hypothetical protein SELMODRAFT_91347 [Selaginella moellendorffii]
gi|300162940|gb|EFJ29552.1| hypothetical protein SELMODRAFT_91347 [Selaginella moellendorffii]
Length = 1255
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 29/38 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T V EEG+D+QSCN V++FD + RS++QS+
Sbjct: 339 NVLICTSVAEEGLDVQSCNCVVRFDICRTLRSFIQSRG 376
>gi|238578670|ref|XP_002388796.1| hypothetical protein MPER_12144 [Moniliophthora perniciosa FA553]
gi|215450407|gb|EEB89726.1| hypothetical protein MPER_12144 [Moniliophthora perniciosa FA553]
Length = 463
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 17 LVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYPKSE 71
++AT V EEG+D +C++VI+FDP QH +YVQS+ R+K + + P+ +
Sbjct: 324 VIATSVAEEGLDFPACDIVIRFDPLQHMVAYVQSRGRA--RNKISKFIIMLPEGD 376
>gi|80979133|gb|ABB54769.1| Dicer-2 [Drosophila teissieri]
Length = 1719
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V+ DP + YVQ+K
Sbjct: 446 FRDGNANLMICSSVLEEGIDVQACNYVLILDPLKTFNMYVQTKG 489
>gi|225563402|gb|EEH11681.1| dicer-like protein [Ajellomyces capsulatus G186AR]
Length = 1436
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
G N+L+AT VLEEGID+ +C+LVI FD + RS++Q +
Sbjct: 432 GKKNLLIATSVLEEGIDVSACHLVICFDTINNLRSFIQRRG 472
>gi|90085300|dbj|BAE91391.1| unnamed protein product [Macaca fascicularis]
Length = 406
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G N+LVAT V EEG+DI CN+V+++ + S VQ++ R +A+Q + +
Sbjct: 75 FRDGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQARG----RARADQSVYSFV 130
Query: 69 KSERYLQYNSPKINRLLQLL 88
+E + IN L++L
Sbjct: 131 ATEGSRELKRELINEALEML 150
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G N+LVAT V EEG+DI CN+V+++ + S VQ++ R +A+Q + +
Sbjct: 207 FRDGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQARG----RARADQSVYSFV 262
Query: 69 KSE 71
+E
Sbjct: 263 ATE 265
>gi|80979093|gb|ABB54749.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V DP + YVQSK
Sbjct: 443 FRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKG 486
>gi|80979089|gb|ABB54747.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V DP + YVQSK
Sbjct: 443 FRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKG 486
>gi|80979091|gb|ABB54748.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V DP + YVQSK
Sbjct: 443 FRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKG 486
>gi|22026807|ref|NP_523778.2| Dicer-2 [Drosophila melanogaster]
gi|21627058|gb|AAF57830.2| Dicer-2 [Drosophila melanogaster]
gi|342672109|gb|AEL30809.1| FI15132p1 [Drosophila melanogaster]
Length = 1722
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V DP + YVQSK
Sbjct: 450 FRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKG 493
>gi|343469629|emb|CCD17439.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 828
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+F +G +LVAT V EEG+D+ CNLVI+FD S++QS+
Sbjct: 481 AFRQGEARLLVATSVCEEGMDVAQCNLVIRFDSCVSLSSFIQSRG 525
>gi|80979099|gb|ABB54752.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V DP + YVQSK
Sbjct: 443 FRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKG 486
>gi|80979097|gb|ABB54751.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V DP + YVQSK
Sbjct: 443 FRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKG 486
>gi|80979085|gb|ABB54745.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V DP + YVQSK
Sbjct: 443 FRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKG 486
>gi|334283448|gb|AAR82738.2| SD11113p [Drosophila melanogaster]
Length = 1701
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V DP + YVQSK
Sbjct: 429 FRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKG 472
>gi|16215719|dbj|BAB69959.1| double-strand-specific ribonuclease [Drosophila melanogaster]
Length = 1722
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V DP + YVQSK
Sbjct: 450 FRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKG 493
>gi|80979087|gb|ABB54746.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V DP + YVQSK
Sbjct: 443 FRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKG 486
>gi|80979095|gb|ABB54750.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V DP + YVQSK
Sbjct: 443 FRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKG 486
>gi|325093360|gb|EGC46670.1| dicer-like protein [Ajellomyces capsulatus H88]
Length = 1436
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
G N+L+AT VLEEGID+ +C+LVI FD + RS++Q +
Sbjct: 432 GKKNLLIATSVLEEGIDVSACHLVICFDTINNLRSFIQRRG 472
>gi|159473675|ref|XP_001694959.1| dicer-like protein [Chlamydomonas reinhardtii]
gi|158276338|gb|EDP02111.1| dicer-like protein [Chlamydomonas reinhardtii]
Length = 1927
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+F+ G N+L++T V EG+D ++CN VI DPP H +VQ
Sbjct: 664 AFSSGALNVLISTSVGAEGLDFRTCNAVIMVDPPDHVTPFVQ 705
>gi|452979125|gb|EME78888.1| hypothetical protein MYCFIDRAFT_43585 [Pseudocercospora fijiensis
CIRAD86]
Length = 1516
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
V +L F +G N L AT V EEG+D+ CNL+I+FD YVQS+
Sbjct: 467 VMVLLKFRKGDLNCLFATSVAEEGLDVPDCNLIIRFDMYATMIQYVQSRG 516
>gi|255732942|ref|XP_002551394.1| hypothetical protein CTRG_05692 [Candida tropicalis MYA-3404]
gi|240131135|gb|EER30696.1| hypothetical protein CTRG_05692 [Candida tropicalis MYA-3404]
Length = 880
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 25/43 (58%)
Query: 7 LSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
S N NILVAT V G+D++S LVI FDPP H YV
Sbjct: 593 FSSNDSGLNILVATSVAARGLDVKSLGLVINFDPPNHMEDYVH 635
>gi|403171941|ref|XP_003331118.2| hypothetical protein PGTG_13081 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169641|gb|EFP86699.2| hypothetical protein PGTG_13081 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1431
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+T+ F G N+ +AT V EEG+D +SC +VI+FD + Y+QS+ R +
Sbjct: 420 RTVAKFRTGEHNLTIATSVAEEGLDFRSCRVVIRFDLITTWKGYIQSRGRARARESDYIV 479
Query: 64 LSQYPKSERYLQYNS 78
+ + +YL ++
Sbjct: 480 MLPTGTANKYLAFSG 494
>gi|403179645|ref|XP_003337958.2| hypothetical protein PGTG_19535 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165150|gb|EFP93539.2| hypothetical protein PGTG_19535 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1431
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+T+ F G N+ +AT V EEG+D +SC +VI+FD + Y+QS+ R +
Sbjct: 420 RTVAKFRTGEHNLTIATSVAEEGLDFRSCRVVIRFDLITTWKGYIQSRGRARARESDYIV 479
Query: 64 LSQYPKSERYLQYNS 78
+ + +YL ++
Sbjct: 480 MLPTGTANKYLAFSG 494
>gi|212529276|ref|XP_002144795.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
gi|210074193|gb|EEA28280.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
Length = 1497
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F +G N L AT V EEG+DI CNLV++FD + YVQS+
Sbjct: 480 KATIEFRKGELNCLFATSVAEEGLDIPDCNLVVRFDLYETLIQYVQSRG 528
>gi|324501737|gb|ADY40770.1| ATP-dependent RNA helicase DDX58 [Ascaris suum]
Length = 1050
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
FN G+ +LVAT V EEG+DI +CNL+IK++ RS +Q +
Sbjct: 755 FNTGLRKVLVATSVAEEGLDISACNLIIKYNNTGSERSLIQRRG 798
>gi|412985285|emb|CCO20310.1| predicted protein [Bathycoccus prasinos]
Length = 607
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M SF G + +L+ATDV G+D++ CNLVI FD P YV
Sbjct: 417 MNSFKSGKSPVLIATDVAARGLDVKECNLVINFDFPGQIEDYVH 460
>gi|342872111|gb|EGU74508.1| hypothetical protein FOXB_14953 [Fusarium oxysporum Fo5176]
Length = 1500
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
V + F RG TN L T V EEGID+ C+LVI+FD Y+QSK +A Q
Sbjct: 480 VLALHEFKRGNTNCLFTTPVAEEGIDVPDCDLVIRFDLYNSVIQYLQSKG------RARQ 533
Query: 63 ILSQY 67
S+Y
Sbjct: 534 ARSRY 538
>gi|6102610|gb|AAF03534.1|AF187317_1 CAF protein [Arabidopsis thaliana]
Length = 1909
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G +LVAT V EEG+DI+ CN+V++FD + +Y+QS+
Sbjct: 715 TISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRG 762
>gi|15223286|ref|NP_171612.1| endoribonuclease Dicer [Arabidopsis thaliana]
gi|34922211|sp|Q9SP32.2|DCL1_ARATH RecName: Full=Endoribonuclease Dicer homolog 1; AltName:
Full=Dicer-like protein 1; Short=AtDCL1; AltName:
Full=Protein ABNORMAL SUSPENSOR 1; AltName: Full=Protein
CARPEL FACTORY; AltName: Full=Protein SHORT INTEGUMENTS
1; AltName: Full=Protein SUSPENSOR 1
gi|11559645|gb|AAG38019.1|AF292940_1 short integuments 1 [Arabidopsis thaliana]
gi|11559647|gb|AAG38020.1|AF292941_1 short integuments 1 [Arabidopsis thaliana]
gi|332189099|gb|AEE27220.1| endoribonuclease Dicer [Arabidopsis thaliana]
Length = 1909
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G +LVAT V EEG+DI+ CN+V++FD + +Y+QS+
Sbjct: 715 TISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRG 762
>gi|374259482|gb|AEZ02177.1| Dicer [Arabidopsis thaliana]
Length = 1886
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G +LVAT V EEG+DI+ CN+V++FD + +Y+QS+
Sbjct: 715 TISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRG 762
>gi|334182203|ref|NP_001184881.1| endoribonuclease Dicer [Arabidopsis thaliana]
gi|332189100|gb|AEE27221.1| endoribonuclease Dicer [Arabidopsis thaliana]
Length = 1910
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G +LVAT V EEG+DI+ CN+V++FD + +Y+QS+
Sbjct: 715 TISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRG 762
>gi|6715634|gb|AAF26461.1|AC007323_2 T25K16.4 [Arabidopsis thaliana]
Length = 2024
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQIL 64
T+ F G +LVAT V EEG+DI+ CN+V++FD + +Y+QS R +A +
Sbjct: 740 TISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQS------RGRARKPG 793
Query: 65 SQYP-KSERYLQYNSPKINRLLQLLRRYNPDQRTIIFCQ 102
S Y ERY++ I + + + D T + C+
Sbjct: 794 SDYILMVERYIKSFKNYILIFVTTGHQISTDMSTCVTCR 832
>gi|154490238|ref|ZP_02030499.1| hypothetical protein PARMER_00470 [Parabacteroides merdae ATCC
43184]
gi|423721833|ref|ZP_17696009.1| hypothetical protein HMPREF1078_00072 [Parabacteroides merdae
CL09T00C40]
gi|154089130|gb|EDN88174.1| DEAD/DEAH box helicase [Parabacteroides merdae ATCC 43184]
gi|409242846|gb|EKN35605.1| hypothetical protein HMPREF1078_00072 [Parabacteroides merdae
CL09T00C40]
Length = 427
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 33/73 (45%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+ M F G +ILVATDV+ GIDI LVI FD P YV T E +
Sbjct: 285 EVMKEFKNGRIDILVATDVVSRGIDINDIKLVINFDIPHDPEDYVHRIGRTARGTNGEGL 344
Query: 64 LSQYPKSERYLQY 76
+ +E Q+
Sbjct: 345 AITFISTEEQFQF 357
>gi|295673975|ref|XP_002797533.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280183|gb|EEH35749.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1450
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 31/41 (75%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
G N+L+AT VLEEGID+ +C+LV+ FD ++ RS++Q +
Sbjct: 473 GKKNLLIATSVLEEGIDVSACHLVVCFDAIKNLRSFIQRRG 513
>gi|423347930|ref|ZP_17325615.1| hypothetical protein HMPREF1060_03287 [Parabacteroides merdae
CL03T12C32]
gi|409215416|gb|EKN08417.1| hypothetical protein HMPREF1060_03287 [Parabacteroides merdae
CL03T12C32]
Length = 427
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 33/73 (45%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+ M F G +ILVATDV+ GIDI LVI FD P YV T E +
Sbjct: 285 EVMKEFKNGRIDILVATDVVSRGIDINDIKLVINFDIPHDPEDYVHRIGRTARGTNGEGL 344
Query: 64 LSQYPKSERYLQY 76
+ +E Q+
Sbjct: 345 AITFISTEEQFQF 357
>gi|374259480|gb|AEZ02176.1| Dicer [Arabidopsis thaliana]
Length = 1033
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G +LVAT V EEG+DI+ CN+V++FD + +Y+QS+
Sbjct: 715 TISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRG 762
>gi|344301469|gb|EGW31781.1| hypothetical protein SPAPADRAFT_155409 [Spathaspora passalidarum
NRRL Y-27907]
Length = 839
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV 48
++ S N G+ +IL+AT V G+D++S LVI FDPP H YV
Sbjct: 555 IKEFSSINSGV-DILIATSVAARGLDVKSLGLVINFDPPNHMEDYV 599
>gi|327349134|gb|EGE77991.1| dicer [Ajellomyces dermatitidis ATCC 18188]
Length = 1482
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
G N+LVAT VLEEGID+ +C+LV+ FD + RS++Q +
Sbjct: 481 GKKNLLVATSVLEEGIDVSACHLVVCFDAISNLRSFIQRRG 521
>gi|239610437|gb|EEQ87424.1| dicer-like protein 2 [Ajellomyces dermatitidis ER-3]
Length = 1509
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
G N+LVAT VLEEGID+ +C+LV+ FD + RS++Q +
Sbjct: 507 GKKNLLVATSVLEEGIDVSACHLVVCFDAISNLRSFIQRRG 547
>gi|261195592|ref|XP_002624200.1| dicer-like protein 2 [Ajellomyces dermatitidis SLH14081]
gi|239588072|gb|EEQ70715.1| dicer-like protein 2 [Ajellomyces dermatitidis SLH14081]
Length = 1509
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
G N+LVAT VLEEGID+ +C+LV+ FD + RS++Q +
Sbjct: 507 GKKNLLVATSVLEEGIDVSACHLVVCFDAISNLRSFIQRRG 547
>gi|408399323|gb|EKJ78431.1| hypothetical protein FPSE_01388 [Fusarium pseudograminearum CS3096]
Length = 1860
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
V T+ F RG N L AT V EEGIDI C+LV++FD Y+QS R +A Q
Sbjct: 837 VITLQRFKRGDVNCLFATPVAEEGIDIPDCDLVVRFDLFNSVIQYLQS------RGRARQ 890
Query: 63 ILSQY 67
S+Y
Sbjct: 891 QRSKY 895
>gi|119618826|gb|EAW98420.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55, isoform CRA_b [Homo
sapiens]
Length = 305
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + F + + ILV TDV+ GIDI N V+++DPP + ++V T + H
Sbjct: 162 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 221
Query: 63 ILSQYPKSERYLQY 76
++ P E Y+ +
Sbjct: 222 LVFLLPMEESYINF 235
>gi|383412907|gb|AFH29667.1| putative ATP-dependent RNA helicase DHX58 [Macaca mulatta]
Length = 678
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G N+LVAT V EEG+DI CN+V+++ + S VQ++ R +A+Q + +
Sbjct: 427 FRDGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQARG----RARADQSVYSFV 482
Query: 69 KSERYLQYNSPKINRLLQLL 88
+E + IN L++L
Sbjct: 483 ATEGSRELKRELINEALEML 502
>gi|330797669|ref|XP_003286881.1| hypothetical protein DICPUDRAFT_150900 [Dictyostelium purpureum]
gi|325083116|gb|EGC36577.1| hypothetical protein DICPUDRAFT_150900 [Dictyostelium purpureum]
Length = 790
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F + N++VAT V+EEG D+ CNLVI+ DPP + +QS+
Sbjct: 606 FRQDKCNLIVATSVVEEGFDVPECNLVIRLDPPTTVTANIQSRG 649
>gi|297848414|ref|XP_002892088.1| hypothetical protein ARALYDRAFT_333551 [Arabidopsis lyrata subsp.
lyrata]
gi|297337930|gb|EFH68347.1| hypothetical protein ARALYDRAFT_333551 [Arabidopsis lyrata subsp.
lyrata]
Length = 1962
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G +LVAT V EEG+DI+ CN+V++FD + +Y+QS+
Sbjct: 708 TISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRG 755
>gi|121713724|ref|XP_001274473.1| RNase3 domain protein [Aspergillus clavatus NRRL 1]
gi|119402626|gb|EAW13047.1| RNase3 domain protein [Aspergillus clavatus NRRL 1]
Length = 1552
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
++ F +G N L AT V EEG+DI CNLV++FD YVQS+
Sbjct: 520 ALVKFRKGEINCLFATSVAEEGLDIPDCNLVVRFDLYHTLIQYVQSRG 567
>gi|432331921|ref|YP_007250064.1| DNA/RNA helicase, superfamily II [Methanoregula formicicum SMSP]
gi|432138630|gb|AGB03557.1| DNA/RNA helicase, superfamily II [Methanoregula formicicum SMSP]
Length = 533
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 10/77 (12%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+ M F +GI +IL+ATDV GID+ ++VI +D PQ YV T
Sbjct: 285 RVMGGFRKGIIDILIATDVAARGIDVDDVDMVINYDIPQDVEYYVHRIGRT--------- 335
Query: 64 LSQYPKSERYLQYNSPK 80
+ +S R + + +PK
Sbjct: 336 -GRAGRSGRAISFVTPK 351
>gi|322514213|ref|ZP_08067275.1| superfamily II helicase [Actinobacillus ureae ATCC 25976]
gi|322119906|gb|EFX91915.1| superfamily II helicase [Actinobacillus ureae ATCC 25976]
Length = 607
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
QT+ G +ILVATDV GIDI+ +LV+ FD P SYV T
Sbjct: 286 QTLAKLKSGRLDILVATDVAARGIDIERISLVVNFDIPLDAESYVHRIGRT--------- 336
Query: 64 LSQYPKSERYLQYNSPKINRLLQ 86
+ +S R L + P+ RLL+
Sbjct: 337 -GRAGRSGRALLFVEPRERRLLR 358
>gi|225684610|gb|EEH22894.1| dicer [Paracoccidioides brasiliensis Pb03]
Length = 1415
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 31/41 (75%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
G N+L+AT VLEEGID+ +C+LV+ FD ++ RS++Q +
Sbjct: 465 GKKNLLIATSVLEEGIDVSACHLVVCFDAIKNLRSFIQRRG 505
>gi|238499727|ref|XP_002381098.1| Dicer-like protein [Aspergillus flavus NRRL3357]
gi|220692851|gb|EED49197.1| Dicer-like protein [Aspergillus flavus NRRL3357]
Length = 694
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQIL 64
++ F G N L AT V EEG+DI CNLVI+FD YVQS+ RH +
Sbjct: 500 ALVKFRSGEINCLFATSVAEEGLDIPDCNLVIRFDLYNTLIQYVQSRG--RARHSSSTYA 557
Query: 65 SQYPKSERYLQYNSPKINRLLQL 87
S + YN+ RL+++
Sbjct: 558 SMIER------YNADHAARLVEV 574
>gi|158706457|sp|A1CBC9.2|DCL1_ASPCL RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1534
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
++ F +G N L AT V EEG+DI CNLV++FD YVQS+
Sbjct: 520 ALVKFRKGEINCLFATSVAEEGLDIPDCNLVVRFDLYHTLIQYVQSRG 567
>gi|226286856|gb|EEH42369.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 1450
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 31/41 (75%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
G N+L+AT VLEEGID+ +C+LV+ FD ++ RS++Q +
Sbjct: 465 GKKNLLIATSVLEEGIDVSACHLVVCFDAIKNLRSFIQRRG 505
>gi|225016981|ref|ZP_03706173.1| hypothetical protein CLOSTMETH_00902 [Clostridium methylpentosum
DSM 5476]
gi|224950247|gb|EEG31456.1| hypothetical protein CLOSTMETH_00902 [Clostridium methylpentosum
DSM 5476]
Length = 563
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ M SF RG T ILVATDV GID+ + + VI +D PQ+ YV
Sbjct: 286 KVMDSFKRGRTKILVATDVAARGIDVNNVDYVINYDVPQNQEYYVH 331
>gi|109115463|ref|XP_001108799.1| PREDICTED: probable ATP-dependent RNA helicase DHX58-like isoform 1
[Macaca mulatta]
gi|355568695|gb|EHH24976.1| Putative ATP-dependent RNA helicase DHX58 [Macaca mulatta]
Length = 678
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G N+LVAT V EEG+DI CN+V+++ + S VQ++ R +A+Q + +
Sbjct: 427 FRDGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQARG----RARADQSVYSFV 482
Query: 69 KSERYLQYNSPKINRLLQLL 88
+E + IN L++L
Sbjct: 483 ATEGSRELKRELINEALEML 502
>gi|355754175|gb|EHH58140.1| Putative ATP-dependent RNA helicase DHX58 [Macaca fascicularis]
Length = 678
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G N+LVAT V EEG+DI CN+V+++ + S VQ++ R +A+Q + +
Sbjct: 427 FRDGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQARG----RARADQSVYSFV 482
Query: 69 KSERYLQYNSPKINRLLQLL 88
+E + IN L++L
Sbjct: 483 ATEGSRELKRELINEALEML 502
>gi|425626948|gb|AFX89032.1| dicer 1 [Mayetiola destructor]
Length = 2057
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 28/38 (73%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
N+L+ T VLEEGI++ CNLV++++ P RSYVQ K
Sbjct: 489 NLLIGTSVLEEGIELPKCNLVVRWNLPTTYRSYVQCKG 526
>gi|258648442|ref|ZP_05735911.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Prevotella
tannerae ATCC 51259]
gi|260851194|gb|EEX71063.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Prevotella
tannerae ATCC 51259]
Length = 484
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+ ML F G +ILVATD++ GIDI LVI +D P+ YV T + +
Sbjct: 291 EVMLGFKAGRIDILVATDIVARGIDIDDITLVINYDVPRDAEDYVHRIGRTARAGRNGRA 350
Query: 64 LSQYPKSERYLQYN 77
++ + +RY N
Sbjct: 351 VTLVGEKDRYALRN 364
>gi|80979103|gb|ABB54754.1| Dicer-2 [Drosophila simulans]
Length = 1537
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V DP + YVQ+K
Sbjct: 445 FREGNANLMICSSVLEEGIDVQACNHVFILDPLKTFNMYVQTKG 488
>gi|198457361|ref|XP_001360634.2| GA19635 [Drosophila pseudoobscura pseudoobscura]
gi|198135949|gb|EAL25209.2| GA19635 [Drosophila pseudoobscura pseudoobscura]
Length = 1720
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N++V + VLEEGID+++CN V+ DP + YVQ+K
Sbjct: 453 FKDGEANLMVCSSVLEEGIDVKACNYVLILDPIKTFNMYVQTKG 496
>gi|154282055|ref|XP_001541840.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412019|gb|EDN07407.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1437
Score = 47.8 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
G N+L+AT VLEEGID+ +C+LV+ FD + RS++Q +
Sbjct: 449 GKKNLLIATSVLEEGIDVSACHLVVCFDTISNLRSFIQRRG 489
>gi|80979113|gb|ABB54759.1| Dicer-2 [Drosophila simulans]
Length = 1565
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V DP + YVQ+K
Sbjct: 445 FREGNANLMICSSVLEEGIDVQACNHVFILDPLKTFNMYVQTKG 488
>gi|297273051|ref|XP_002800519.1| PREDICTED: probable ATP-dependent RNA helicase DHX58-like isoform 2
[Macaca mulatta]
Length = 661
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G N+LVAT V EEG+DI CN+V+++ + S VQ++ R +A+Q + +
Sbjct: 410 FRDGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQARG----RARADQSVYSFV 465
Query: 69 KSERYLQYNSPKINRLLQLL 88
+E + IN L++L
Sbjct: 466 ATEGSRELKRELINEALEML 485
>gi|218259702|ref|ZP_03475335.1| hypothetical protein PRABACTJOHN_00994, partial [Parabacteroides
johnsonii DSM 18315]
gi|218224948|gb|EEC97598.1| hypothetical protein PRABACTJOHN_00994 [Parabacteroides johnsonii
DSM 18315]
Length = 372
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 33/73 (45%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+ M F G +ILVATDV+ GIDI LVI FD P YV T E +
Sbjct: 231 EVMKEFKNGRIDILVATDVVSRGIDINDIKLVINFDIPHDPEDYVHRIGRTARGTNGEGL 290
Query: 64 LSQYPKSERYLQY 76
+ +E Q+
Sbjct: 291 AITFISTEEQFQF 303
>gi|423344472|ref|ZP_17322184.1| hypothetical protein HMPREF1077_03614 [Parabacteroides johnsonii
CL02T12C29]
gi|409212870|gb|EKN05904.1| hypothetical protein HMPREF1077_03614 [Parabacteroides johnsonii
CL02T12C29]
Length = 426
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 33/73 (45%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+ M F G +ILVATDV+ GIDI LVI FD P YV T E +
Sbjct: 285 EVMKEFKNGRIDILVATDVVSRGIDINDIKLVINFDIPHDPEDYVHRIGRTARGTNGEGL 344
Query: 64 LSQYPKSERYLQY 76
+ +E Q+
Sbjct: 345 AITFISTEEQFQF 357
>gi|80979111|gb|ABB54758.1| Dicer-2 [Drosophila simulans]
Length = 1564
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V DP + YVQ+K
Sbjct: 445 FREGNANLMICSSVLEEGIDVQACNHVFILDPLKTFNMYVQTKG 488
>gi|80979107|gb|ABB54756.1| Dicer-2 [Drosophila simulans]
Length = 1567
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V DP + YVQ+K
Sbjct: 445 FREGNANLMICSSVLEEGIDVQACNHVFILDPLKTFNMYVQTKG 488
>gi|449478272|ref|XP_004155270.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
1-like [Cucumis sativus]
Length = 1987
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G +LVAT V EEG+DI+ CN+V++FD + +Y+QS+
Sbjct: 798 TISKFRDGRVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRG 845
>gi|78042906|ref|YP_359101.1| DEAD/DEAH box helicase [Carboxydothermus hydrogenoformans Z-2901]
gi|77995021|gb|ABB13920.1| ATP-dependent RNA helicase, DEAD box family [Carboxydothermus
hydrogenoformans Z-2901]
Length = 430
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 11/72 (15%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV-----------QSKA 52
QT+ SF G T +LVATDV G+DI + VI FD PQ+ SY+ + KA
Sbjct: 280 QTIKSFKAGKTELLVATDVAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKA 339
Query: 53 FTVVRHKAEQIL 64
T++ ++ ++L
Sbjct: 340 ITLINYRERKLL 351
>gi|449432976|ref|XP_004134274.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Cucumis sativus]
Length = 1986
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F G +LVAT V EEG+DI+ CN+V++FD + +Y+QS+
Sbjct: 797 TISKFRDGRVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRG 844
>gi|80979105|gb|ABB54755.1| Dicer-2 [Drosophila simulans]
gi|80979109|gb|ABB54757.1| Dicer-2 [Drosophila simulans]
Length = 1714
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V DP + YVQ+K
Sbjct: 445 FREGNANLMICSSVLEEGIDVQACNHVFILDPLKTFNMYVQTKG 488
>gi|66813222|ref|XP_640790.1| RNA-directed RNA polymerase [Dictyostelium discoideum AX4]
gi|60468778|gb|EAL66778.1| RNA-directed RNA polymerase [Dictyostelium discoideum AX4]
Length = 2285
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
Q + F G+ +LV+T+VLEEGIDI+ CN VI FD +S +Q +
Sbjct: 444 QIIQQFKEGVCQVLVSTNVLEEGIDIKECNSVICFDNLYSLKSLIQRRG 492
>gi|80979101|gb|ABB54753.1| Dicer-2 [Drosophila simulans]
Length = 1714
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V DP + YVQ+K
Sbjct: 445 FREGNANLMICSSVLEEGIDVQACNHVFILDPLKTFNMYVQTKG 488
>gi|80979115|gb|ABB54760.1| Dicer-2 [Drosophila simulans]
Length = 1714
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V DP + YVQ+K
Sbjct: 445 FREGNANLMICSSVLEEGIDVQACNHVFILDPLKTFNMYVQTKG 488
>gi|195584278|ref|XP_002081941.1| Dcr-2 [Drosophila simulans]
gi|194193950|gb|EDX07526.1| Dcr-2 [Drosophila simulans]
Length = 1666
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V DP + YVQ+K
Sbjct: 463 FREGNANLMICSSVLEEGIDVQACNHVFILDPLKTFNMYVQTKG 506
>gi|344299254|ref|XP_003421302.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Loxodonta africana]
Length = 690
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+T+ F +G +LV+TD GID+Q LV+ +D PQ+ R+YV T +A Q
Sbjct: 570 RTLKKFEQGKIQLLVSTDATARGIDVQGVELVLNYDAPQYARTYVHRVGRTARAGRAGQA 629
Query: 64 LS 65
+
Sbjct: 630 FT 631
>gi|325280173|ref|YP_004252715.1| DEAD/DEAH box helicase domain-containing protein [Odoribacter
splanchnicus DSM 20712]
gi|324311982|gb|ADY32535.1| DEAD/DEAH box helicase domain protein [Odoribacter splanchnicus DSM
20712]
Length = 417
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
ML F G T+ILVATD++ GIDI LVI +D P Y+
Sbjct: 287 MLDFKNGKTDILVATDIVARGIDIDDIGLVINYDVPHDPEDYIH 330
>gi|260912300|ref|ZP_05918851.1| ATP-dependent RNA helicase DeaD [Prevotella sp. oral taxon 472 str.
F0295]
gi|260633601|gb|EEX51740.1| ATP-dependent RNA helicase DeaD [Prevotella sp. oral taxon 472 str.
F0295]
Length = 447
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHK------ 59
M F G T++LVATD+L GIDI +VI +D P YV T +
Sbjct: 288 MFKFKSGATDVLVATDILSRGIDIDDITMVINYDVPHDVEDYVHRIGRTARAERDGVAIT 347
Query: 60 --AEQILSQYPKSERYLQYNSPKI 81
++Q + + + ER+L+ + K+
Sbjct: 348 LISDQDVYYFQQIERFLEKDIEKV 371
>gi|110520367|gb|ABG74922.1| Dicer-like 1b protein [Physcomitrella patens]
Length = 1695
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+T+ F G +LVAT V EG+DI+ CN+VI+FD + +Y+QS+
Sbjct: 488 ETISKFRDGRVTLLVATSVAAEGLDIRQCNVVIRFDLAKTVLAYIQSRG 536
>gi|410657291|ref|YP_006909662.1| ATP-dependent RNA helicase YxiN [Dehalobacter sp. DCA]
gi|410660327|ref|YP_006912698.1| ATP-dependent RNA helicase YxiN [Dehalobacter sp. CF]
gi|409019646|gb|AFV01677.1| ATP-dependent RNA helicase YxiN [Dehalobacter sp. DCA]
gi|409022683|gb|AFV04713.1| ATP-dependent RNA helicase YxiN [Dehalobacter sp. CF]
Length = 483
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
+ M F RG L+ATDV GIDI+ +LVI FD PQ SYV T +K +
Sbjct: 284 LSVMDDFKRGYFRYLIATDVAARGIDIEDISLVINFDLPQEKESYVHRIGRTGRLNKNGK 343
Query: 63 ILS-QYPKSERYLQYNSPKINRLLQLLRRYNPDQRTI 98
+S + + YLQ I + + L +R P Q T+
Sbjct: 344 AISFVTEEDDSYLQDIQKYIGQEIPLKQR--PSQDTV 378
>gi|83772763|dbj|BAE62891.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391869364|gb|EIT78563.1| dsRNA-specific nuclease Dicer [Aspergillus oryzae 3.042]
Length = 1374
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQIL 64
++ F G N L AT V EEG+DI CNLV++FD YVQS+ RH +
Sbjct: 420 ALVKFRSGEINCLFATSVAEEGLDIPDCNLVVRFDLYNTLIQYVQSRG--RARHSSSTYA 477
Query: 65 SQYPKSERYLQYNSPKINRLLQL 87
S + YN+ RL+++
Sbjct: 478 SMIER------YNADHAARLVEV 494
>gi|282880318|ref|ZP_06289032.1| ATP-dependent RNA helicase DeaD family protein [Prevotella
timonensis CRIS 5C-B1]
gi|281305820|gb|EFA97866.1| ATP-dependent RNA helicase DeaD family protein [Prevotella
timonensis CRIS 5C-B1]
Length = 583
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+ ML+F G ++LVATD++ GIDI ++VI +D P YV T + Q
Sbjct: 286 EVMLNFKSGQLDVLVATDIVARGIDIDDISMVINYDVPNDAEDYVHRIGRTARADRDGQA 345
Query: 64 LSQYPKSERYL 74
++ + + YL
Sbjct: 346 ITLVAQDDTYL 356
>gi|291406113|ref|XP_002719437.1| PREDICTED: DEXH (Asp-Glu-X-His) box polypeptide 58-like
[Oryctolagus cuniculus]
Length = 678
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G+ N+LVAT V+EEG+DI CN+V+++ + S VQ++ R +A+Q + +
Sbjct: 427 FRAGMLNLLVATSVVEEGMDIPHCNVVVRYGLLTNEISMVQARG----RARADQSVYSFV 482
Query: 69 KSERYLQYNSPKINRLLQLL 88
+E + N +L+ L
Sbjct: 483 ATEGSRELRRELTNEMLEAL 502
>gi|317150438|ref|XP_001824024.2| dicer-like protein 1 [Aspergillus oryzae RIB40]
gi|158706453|sp|Q2U6C4.2|DCL1_ASPOR RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1523
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQIL 64
++ F G N L AT V EEG+DI CNLV++FD YVQS+ RH +
Sbjct: 512 ALVKFRSGEINCLFATSVAEEGLDIPDCNLVVRFDLYNTLIQYVQSRG--RARHSSSTYA 569
Query: 65 SQYPKSERYLQYNSPKINRLLQL 87
S + YN+ RL+++
Sbjct: 570 SMIER------YNADHAARLVEV 586
>gi|441677777|ref|XP_004092765.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DHX58 [Nomascus leucogenys]
Length = 609
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+ + F G N+LVAT V EEG+DI CN+V+++ + S VQ++ R +A+Q
Sbjct: 353 EVIWKFRNGTLNLLVATSVAEEGLDIPHCNVVVRYGLLTNEISMVQARG----RARADQS 408
Query: 64 LSQYPKSERYLQYNSPKINRLLQLL 88
+ + +E + IN L+ L
Sbjct: 409 VYSFVATEGSRELKRELINEALETL 433
>gi|198430581|ref|XP_002121377.1| PREDICTED: similar to DEAD/H box polypeptide RIG-I [Ciona
intestinalis]
Length = 1013
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQIL 64
T+ SF G ++VAT V EEG+DI++CNL+I ++ + VQ + R K +++
Sbjct: 726 TIASFRDGRCKVIVATSVAEEGLDIKACNLIITYNYSTNEIGQVQRQGRG--RAKGSKMI 783
Query: 65 SQYPKSERYLQYNSPKINR------LLQLLRRYNPDQ 95
++Q I R +LQ+LR+ +P+Q
Sbjct: 784 ILAYDDSSHIQREKSNIIRVKFTHDILQMLRQMDPEQ 820
>gi|410672237|ref|YP_006924608.1| DEAD/DEAH box helicase domain-containing protein [Methanolobus
psychrophilus R15]
gi|409171365|gb|AFV25240.1| DEAD/DEAH box helicase domain-containing protein [Methanolobus
psychrophilus R15]
Length = 431
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 11/62 (17%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV-----------QSKAFT 54
M SF +G LVATDV GID+++ +V FD PQ SYV Q +AFT
Sbjct: 285 MASFRKGDIETLVATDVAARGIDVENIEVVFNFDLPQDEESYVHRIGRTGRAGRQGRAFT 344
Query: 55 VV 56
V
Sbjct: 345 FV 346
>gi|195150547|ref|XP_002016212.1| GL10619 [Drosophila persimilis]
gi|194110059|gb|EDW32102.1| GL10619 [Drosophila persimilis]
Length = 1720
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N++V + VLEEGID+++CN V+ DP + YVQ+K
Sbjct: 453 FRDGEANLMVCSSVLEEGIDVKACNYVLILDPIKTFNMYVQTKG 496
>gi|340519177|gb|EGR49416.1| predicted protein [Trichoderma reesei QM6a]
Length = 558
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV--VRHKAEQ 62
T F+ IL+ TDV G+DI + + +++FDPP +TR Y+ T K
Sbjct: 369 TFFEFSNAPHGILICTDVAARGLDIPAVDFIVQFDPPDNTRDYIHRVGRTARGANGKGRS 428
Query: 63 ILSQYPKSERYLQY 76
+L P +L Y
Sbjct: 429 LLFLQPNEVGFLSY 442
>gi|407692430|ref|YP_006817219.1| cold-shock DEAD box protein A-like protein [Actinobacillus suis
H91-0380]
gi|407388487|gb|AFU18980.1| cold-shock DEAD box protein A-like protein [Actinobacillus suis
H91-0380]
Length = 619
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
QT+ G +ILVATDV GIDI+ +LV+ FD P SYV T
Sbjct: 286 QTLEKLKSGRLDILVATDVAARGIDIERISLVVNFDIPLDAESYVHRIGRT--------- 336
Query: 64 LSQYPKSERYLQYNSPKINRLLQ 86
+ +S R L + P+ RLL+
Sbjct: 337 -GRAGRSGRALLFVEPRERRLLR 358
>gi|330798142|ref|XP_003287114.1| hypothetical protein DICPUDRAFT_54684 [Dictyostelium purpureum]
gi|325082892|gb|EGC36360.1| hypothetical protein DICPUDRAFT_54684 [Dictyostelium purpureum]
Length = 2341
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 8/63 (12%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA--------FTVVRHKA 60
F G ++V+T+VLEEGIDI+ CN+VI +D +S VQ + F V+ H +
Sbjct: 683 FRDGKCKLIVSTNVLEEGIDIKECNMVICYDSVLSLKSLVQRRGRARSENSQFIVIHHTS 742
Query: 61 EQI 63
++I
Sbjct: 743 KEI 745
>gi|298708667|emb|CBJ26154.1| ATP-dependent RNA helicase, putative [Ectocarpus siliculosus]
Length = 1005
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 18/101 (17%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSK--------AFTV 55
+ + +F G N+L++T V EEGID+ N V+++DP H S VQ + +F V
Sbjct: 367 ENLEAFRSGSVNLLLSTCVAEEGIDVPDANCVVRYDPMDHAVSMVQGRGRARGAESSFVV 426
Query: 56 VRHKAEQILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQR 96
+ +A++ + E+ R L LR PD +
Sbjct: 427 LCERADRTTADLEAVEQ----------RQLWHLRNMEPDHQ 457
>gi|171690380|ref|XP_001910115.1| hypothetical protein [Podospora anserina S mat+]
gi|170945138|emb|CAP71249.1| unnamed protein product [Podospora anserina S mat+]
Length = 1568
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
V T++ F +G N + AT V EEG+DI CN++I+FD Y+QS+
Sbjct: 524 VLTIIKFKKGELNCIFATSVAEEGLDIPDCNIIIRFDLYDTLIQYIQSRG 573
>gi|440632076|gb|ELR01995.1| hypothetical protein GMDG_05164 [Geomyces destructans 20631-21]
Length = 1634
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 30/50 (60%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
V T+ F +G N L AT V EEG+DI CNLVI+FD Y+QS+
Sbjct: 575 VITLRRFRQGEINCLFATSVAEEGLDIPDCNLVIRFDLYSTVIQYIQSRG 624
>gi|393909534|gb|EFO22079.2| hypothetical protein LOAG_06406 [Loa loa]
Length = 989
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G IL AT V EEGIDIQ CNLVIK+D + ++VQ +
Sbjct: 719 FTSGDIKILCATSVAEEGIDIQKCNLVIKYDYVTNEIAHVQRRG 762
>gi|149063250|gb|EDM13573.1| rCG21751, isoform CRA_a [Rattus norvegicus]
Length = 298
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + F + + ILV TDV+ GIDI N V+++DPP + ++V T + H
Sbjct: 7 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 66
Query: 63 ILSQYPKSERYLQY 76
++ P E Y+ +
Sbjct: 67 LVFLLPMEEAYINF 80
>gi|322702026|gb|EFY93774.1| Dicer-like protein 1 [Metarhizium acridum CQMa 102]
Length = 1524
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQY 67
F G TN + AT V EEGIDI C+L+I+FD Y+QSK +A Q+ S Y
Sbjct: 528 FRYGETNCIFATQVAEEGIDIPECDLIIRFDLYDSAIQYIQSKG------RARQVHSVY 580
>gi|111226989|ref|XP_001134628.1| hypothetical protein DDB_G0294407 [Dictyostelium discoideum AX4]
gi|90971302|gb|EAS66962.1| hypothetical protein DDB_G0294407 [Dictyostelium discoideum AX4]
Length = 837
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 12/73 (16%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA---------FTVVR---HKAEQ 62
N++VAT V+EEG D+ CN+VI+ DPP + +QS+ + +V+ + +
Sbjct: 645 NVIVATSVVEEGFDVPECNIVIRLDPPTTVTANIQSRGRLRNRDSYFYGIVKVDDPREDN 704
Query: 63 ILSQYPKSERYLQ 75
I + ERYL+
Sbjct: 705 IYEFFKNQERYLE 717
>gi|365122531|ref|ZP_09339432.1| hypothetical protein HMPREF1033_02778 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642279|gb|EHL81637.1| hypothetical protein HMPREF1033_02778 [Tannerella sp.
6_1_58FAA_CT1]
Length = 428
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ ML F G ++LVATD++ GIDI LVI FD P Y+
Sbjct: 285 EVMLDFKNGKVDVLVATDIVARGIDITDIGLVINFDVPHDPEDYIH 330
>gi|355786666|gb|EHH66849.1| hypothetical protein EGM_03914, partial [Macaca fascicularis]
Length = 494
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F +G +L++TD GID+Q LV+ +D PQ+ R+YV T K Q +
Sbjct: 379 FEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTYVHRAGRTARAGKMGQAFTLLL 438
Query: 69 KSE--RYLQY----NSPKINR 83
K + R+LQ +P++ R
Sbjct: 439 KVQERRFLQMLTEAGAPELRR 459
>gi|330804914|ref|XP_003290434.1| hypothetical protein DICPUDRAFT_37328 [Dictyostelium purpureum]
gi|325079445|gb|EGC33045.1| hypothetical protein DICPUDRAFT_37328 [Dictyostelium purpureum]
Length = 600
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+T+ F + IL+AT + G+DI+ NLV+ FD P H YV T +K
Sbjct: 315 ETITDFKNKVKTILIATPLASRGLDIKDLNLVVNFDCPDHLEDYVHRVGRTGRAGNKGTA 374
Query: 63 ILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQ 95
P+ ERY SP I + L+ PD+
Sbjct: 375 YTFITPEEERY----SPSIIKALEQSGSKVPDE 403
>gi|312079013|ref|XP_003141990.1| hypothetical protein LOAG_06406 [Loa loa]
Length = 744
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G IL AT V EEGIDIQ CNLVIK+D + ++VQ +
Sbjct: 511 FTSGDIKILCATSVAEEGIDIQKCNLVIKYDYVTNEIAHVQRRG 554
>gi|156095474|ref|XP_001613772.1| pre-mRNA splicing factor RNA helicase PRP28 [Plasmodium vivax
Sal-1]
gi|148802646|gb|EDL44045.1| pre-mRNA splicing factor RNA helicase PRP28, putative [Plasmodium
vivax]
Length = 1006
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
QT+ SF G +ILVATDV GID+Q LVI FD P+ SY
Sbjct: 891 QTLNSFKNGDFDILVATDVAGRGIDVQGVKLVINFDMPKDIESYTH 936
>gi|406603210|emb|CCH45247.1| ATP-dependent rRNA helicase RRP3 [Wickerhamomyces ciferrii]
Length = 488
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
F G TNILVATDV G+DI S ++VI +D P +++Y+
Sbjct: 359 FKSGKTNILVATDVAARGLDIPSVDIVINYDIPTDSKAYIH 399
>gi|159465205|ref|XP_001690813.1| predicted protein [Chlamydomonas reinhardtii]
gi|158279499|gb|EDP05259.1| predicted protein [Chlamydomonas reinhardtii]
Length = 446
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
F G NILVATDV G+DI S ++VI FD PQ+++ YV
Sbjct: 302 FKSGERNILVATDVASRGLDIPSVDVVINFDVPQNSKDYVH 342
>gi|327402381|ref|YP_004343219.1| DEAD/DEAH box helicase domain-containing protein [Fluviicola
taffensis DSM 16823]
gi|327317889|gb|AEA42381.1| DEAD/DEAH box helicase domain protein [Fluviicola taffensis DSM
16823]
Length = 410
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 16/105 (15%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+ + F T ILVATDV+ GIDI+ NLVI +D P+ YV H+ +
Sbjct: 285 EVLRGFRSKRTRILVATDVMSRGIDIKEINLVINYDAPRDAEDYV---------HRIGRT 335
Query: 64 LSQYPKSERYLQYNSPKINRLLQLLRRYNPDQRTIIFCQRRATIP 108
K E Y N + +L ++ +R I +RA+IP
Sbjct: 336 ARANTKGEAYTLINPKDMPKLARI-------ERLIEMEIQRASIP 373
>gi|429740086|ref|ZP_19273797.1| DEAD/DEAH box helicase [Prevotella saccharolytica F0055]
gi|429154363|gb|EKX97096.1| DEAD/DEAH box helicase [Prevotella saccharolytica F0055]
Length = 447
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F G T++LVATD+L GIDI +VI +D P YV
Sbjct: 287 MFRFKSGATDVLVATDILARGIDIDDITMVINYDVPHDVEDYVH 330
>gi|422293255|gb|EKU20555.1| dead deah box rna, partial [Nannochloropsis gaditana CCMP526]
Length = 414
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G +IL+ATDV G+DI + +LVI FD P H + Y+ T +A + ++
Sbjct: 321 FKSGQRSILIATDVASRGLDIPAVDLVINFDIPSHGKDYIHRVGRTARAGRAGRSIAMVT 380
Query: 69 KSERYLQYNSPKINRLLQL----LRRYNPDQRTIIFCQRR 104
QY+ RL L L Y D+ T++ R
Sbjct: 381 ------QYDVEVYQRLEALLGTKLPEYKTDEETVLILLER 414
>gi|451850832|gb|EMD64133.1| hypothetical protein COCSADRAFT_142297 [Cochliobolus sativus
ND90Pr]
Length = 1435
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 4 QTMLS-FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV 48
QT+L F GI N+++ T VLEEGID+ SC+LV+ F+ P+ + +V
Sbjct: 451 QTVLDDFKAGIINLVLTTSVLEEGIDVPSCHLVVCFEAPKTLKGFV 496
>gi|334322694|ref|XP_001366879.2| PREDICTED: probable ATP-dependent RNA helicase DHX58 [Monodelphis
domestica]
Length = 679
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G N+LVAT V EEG+DI CN+++++D + S +Q++ R +A Q + +
Sbjct: 428 FREGTLNLLVATSVAEEGLDIPQCNMIVRYDLLTNEISMMQARG----RARASQSMYSFV 483
Query: 69 KSERYLQYNSPKINRLLQLLRR 90
+ + + N L+ L R
Sbjct: 484 AGQGSKELHREMTNEALEALMR 505
>gi|330794390|ref|XP_003285262.1| hypothetical protein DICPUDRAFT_149105 [Dictyostelium purpureum]
gi|325084804|gb|EGC38224.1| hypothetical protein DICPUDRAFT_149105 [Dictyostelium purpureum]
Length = 2292
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 27/44 (61%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G IL+AT+VLEEGIDI C LVI FD RS +Q +
Sbjct: 468 FKNGSCEILIATNVLEEGIDIPECKLVICFDSIYSVRSLIQRRG 511
>gi|223984537|ref|ZP_03634669.1| hypothetical protein HOLDEFILI_01964 [Holdemania filiformis DSM
12042]
gi|223963523|gb|EEF67903.1| hypothetical protein HOLDEFILI_01964 [Holdemania filiformis DSM
12042]
Length = 556
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M M +F +G NILVATDV GID+ S ++V +D PQ + YV
Sbjct: 279 MRTGVMDNFKKGKINILVATDVAARGIDVDSMDVVFNYDLPQESEYYVH 327
>gi|146324173|ref|XP_753471.2| RNA helicase/RNAse III [Aspergillus fumigatus Af293]
gi|129558032|gb|EAL91433.2| RNA helicase/RNAse III, putative [Aspergillus fumigatus Af293]
Length = 1546
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
++ F G N L AT V EEG+DI CNLVI+FD + YVQS+
Sbjct: 544 ALVKFRTGEINCLFATSVAEEGLDIPDCNLVIRFDLYRTLIQYVQSRG 591
>gi|244539109|dbj|BAH83152.1| ATP-dependent RNA helicase [Candidatus Ishikawaella capsulata
Mpkobe]
Length = 562
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+T+ F G +IL+ATDV G+D++ +LVI +D P SY+ T +A +
Sbjct: 285 KTLERFKNGNLDILIATDVAARGLDVERISLVINYDIPLDVESYIHRIGRTGRAGRAGRA 344
Query: 64 LSQYPKSERYLQYN 77
L + ER L YN
Sbjct: 345 LLFVERRERRLLYN 358
>gi|159126799|gb|EDP51915.1| RNA helicase/RNAse III, putative [Aspergillus fumigatus A1163]
Length = 1546
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
++ F G N L AT V EEG+DI CNLVI+FD + YVQS+
Sbjct: 544 ALVKFRTGEINCLFATSVAEEGLDIPDCNLVIRFDLYRTLIQYVQSRG 591
>gi|429848709|gb|ELA24159.1| RNase3 domain protein [Colletotrichum gloeosporioides Nara gc5]
Length = 1561
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 30/50 (60%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
V T+ F G N L AT V EEGIDI C++VI+FD + Y+QSK
Sbjct: 531 VLTISKFRHGKVNCLFATQVAEEGIDIPDCSIVIRFDLYRSAIQYIQSKG 580
>gi|436836087|ref|YP_007321303.1| DEAD/DEAH box helicase domain protein [Fibrella aestuarina BUZ 2]
gi|384067500|emb|CCH00710.1| DEAD/DEAH box helicase domain protein [Fibrella aestuarina BUZ 2]
Length = 658
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
M F G+T ILVATDV GID+ + + VI +D P YV T K+ + S
Sbjct: 335 MSKFRSGVTTILVATDVAARGIDVDNVDAVINYDVPLDEEYYVHRIGRTGRAGKSGRAFS 394
Query: 66 QYPKSERY 73
+ E+Y
Sbjct: 395 LVSRDEKY 402
>gi|238492897|ref|XP_002377685.1| ATP-dependent helicase, putative [Aspergillus flavus NRRL3357]
gi|220696179|gb|EED52521.1| ATP-dependent helicase, putative [Aspergillus flavus NRRL3357]
Length = 386
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 34/50 (68%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
++T+ F G+ ++++ TD LEEG+DI +CN V+ F+ + +S++Q +
Sbjct: 260 METLQKFRDGVLDLIITTDALEEGMDIPACNTVLNFNCTLNLKSFIQRRG 309
>gi|343428057|emb|CBQ71581.1| related to cell cycle control protein dicer [Sporisorium reilianum
SRZ2]
Length = 1683
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 3 VQTMLSFNR-GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAE 61
VQ + F R TN+LVAT + EEG+DIQ+ NLV++FD S++QS+ R +A+
Sbjct: 569 VQVLNRFRRRKPTNLLVATSIAEEGLDIQAANLVVRFDLFNRHISFLQSRG----RARAK 624
Query: 62 Q 62
Q
Sbjct: 625 Q 625
>gi|73668740|ref|YP_304755.1| Hef nuclease [Methanosarcina barkeri str. Fusaro]
gi|72395902|gb|AAZ70175.1| ATP-dependent RNA helicase, EIF-4A family [Methanosarcina barkeri
str. Fusaro]
Length = 938
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDP-PQHTRSYVQSKAFTVVRHKAE 61
V+ + F G N+LVAT V EEG+DI S +LV+ ++P P RS +Q K T +HK
Sbjct: 424 VEVLDKFRAGEYNVLVATSVAEEGLDIPSTDLVLFYEPIPSEIRS-IQRKGRTGRQHKGR 482
Query: 62 QIL--SQYPKSERYLQYNSPKINRLL 85
I+ ++ + E Y + K R+L
Sbjct: 483 VIILVTKGTRDEAYYWSSKSKEKRML 508
>gi|405972658|gb|EKC37415.1| Putative ATP-dependent RNA helicase DHX58 [Crassostrea gigas]
Length = 538
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+T+ F +G ++VAT + EEG+DI++CNLV+K+D + S +Q+K H I
Sbjct: 276 ETIKLFTKGDYKVIVATTIAEEGLDIKACNLVVKYDYAGNLISQIQAKGRGRAEHSRFFI 335
Query: 64 LSQYPK 69
L+ K
Sbjct: 336 LASEDK 341
>gi|307245436|ref|ZP_07527524.1| Cold-shock DEAD box protein A [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307247549|ref|ZP_07529593.1| Cold-shock DEAD box protein A [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307254390|ref|ZP_07536228.1| Cold-shock DEAD box protein A [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307256597|ref|ZP_07538378.1| Cold-shock DEAD box protein A [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307258849|ref|ZP_07540581.1| Cold-shock DEAD box protein A [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307261031|ref|ZP_07542713.1| Cold-shock DEAD box protein A [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|307263212|ref|ZP_07544832.1| Cold-shock DEAD box protein A [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|306853777|gb|EFM85994.1| Cold-shock DEAD box protein A [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306855914|gb|EFM88073.1| Cold-shock DEAD box protein A [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306862689|gb|EFM94645.1| Cold-shock DEAD box protein A [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865007|gb|EFM96909.1| Cold-shock DEAD box protein A [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306867200|gb|EFM99056.1| Cold-shock DEAD box protein A [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306869333|gb|EFN01128.1| Cold-shock DEAD box protein A [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306871429|gb|EFN03153.1| Cold-shock DEAD box protein A [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 593
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
QT+ G +ILVATDV GIDI+ +LV+ FD P SYV T
Sbjct: 260 QTLDKLKSGRLDILVATDVAARGIDIERISLVVNFDIPLDAESYVHRIGRT--------- 310
Query: 64 LSQYPKSERYLQYNSPKINRLLQ 86
+ +S R L + P+ RLL+
Sbjct: 311 -GRAGRSGRALLFVEPRERRLLR 332
>gi|296424770|ref|XP_002841919.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638171|emb|CAZ86110.1| unnamed protein product [Tuber melanosporum]
Length = 1402
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ F +G N L+AT V EEG+DI C+LVI+FD + YVQS+
Sbjct: 395 TVSKFRQGKLNCLIATSVAEEGLDIPDCSLVIRFDLYRTMIQYVQSRG 442
>gi|158706522|sp|Q4WVE3.3|DCL1_ASPFU RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1537
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
++ F G N L AT V EEG+DI CNLVI+FD + YVQS+
Sbjct: 523 ALVKFRTGEINCLFATSVAEEGLDIPDCNLVIRFDLYRTLIQYVQSRG 570
>gi|120436503|ref|YP_862189.1| ATP-dependent RNA helicase [Gramella forsetii KT0803]
gi|117578653|emb|CAL67122.1| RhlE-like DEAD box family ATP-dependent RNA helicase [Gramella
forsetii KT0803]
Length = 455
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAE 61
++++ F+ G++ IL+ATDV+ G+DI++ + V+ FD PQ+ +Y+ T K +
Sbjct: 291 LKSVGDFDEGLSRILIATDVMARGLDIENVSHVVNFDTPQYPENYMHRIGRTGRAEKKGQ 350
Query: 62 QILSQYPKSERYL 74
+L + YL
Sbjct: 351 SLLFTTEAEQEYL 363
>gi|238881066|gb|EEQ44704.1| hypothetical protein CAWG_02983 [Candida albicans WO-1]
Length = 368
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
++ S + GI NIL+AT + G+D+++ LVI FDPP H YV
Sbjct: 81 IKEFASMDSGI-NILIATSIAARGLDVRNLGLVINFDPPNHMEDYVH 126
>gi|389584149|dbj|GAB66882.1| pre-mRNA splicing factor RNA helicase PRP28 [Plasmodium cynomolgi
strain B]
Length = 1104
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
QT+ SF G +ILVATDV GID+Q LVI FD P+ SY
Sbjct: 986 QTLNSFKNGDFDILVATDVAGRGIDVQGVKLVINFDMPKDIESYTH 1031
>gi|358382399|gb|EHK20071.1| hypothetical protein TRIVIDRAFT_171594 [Trichoderma virens Gv29-8]
Length = 584
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV--VRHKAEQ 62
T F+ IL+ TDV G+DI + + +++FDPP +TR Y+ T K
Sbjct: 395 TFFEFSNAPHGILICTDVAARGLDIPAVDFIVQFDPPDNTRDYIHRVGRTARGADAKGRS 454
Query: 63 ILSQYPKSERYLQY 76
+L P +L Y
Sbjct: 455 LLFLQPNEVGFLSY 468
>gi|390603552|gb|EIN12944.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 1524
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+T+ G N++++T V EEGIDIQ+C V ++DPP + S+ QS+
Sbjct: 480 ETLEDLKIGEKNLIISTAVAEEGIDIQACGAVFRWDPPPNMVSWAQSRG 528
>gi|241953695|ref|XP_002419569.1| pre-mRNA-processing ATP-dependent RNA helicase, putative [Candida
dubliniensis CD36]
gi|223642909|emb|CAX43164.1| pre-mRNA-processing ATP-dependent RNA helicase, putative [Candida
dubliniensis CD36]
Length = 873
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
++ S + GI NIL+AT + G+D+++ LVI FDPP H YV
Sbjct: 585 IKEFASMDSGI-NILIATSIAARGLDVRNLGLVINFDPPNHMEDYVH 630
>gi|422346062|ref|ZP_16426976.1| hypothetical protein HMPREF9476_01049 [Clostridium perfringens
WAL-14572]
gi|373226684|gb|EHP49006.1| hypothetical protein HMPREF9476_01049 [Clostridium perfringens
WAL-14572]
Length = 524
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 13/97 (13%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV-----------QSK 51
+QT+ F G + LVATDV GID++S VI +D PQ SYV +
Sbjct: 285 LQTLRKFKEGSLDFLVATDVAARGIDVESVTHVINYDLPQDNESYVHRIGRTGRANREGV 344
Query: 52 AFTVVRHKAEQILSQYPK--SERYLQYNSPKINRLLQ 86
A+++V K +L Q K + ++ P ++ + Q
Sbjct: 345 AYSLVTPKEYMMLKQIQKHTKSKIIRKAVPTVDEIFQ 381
>gi|307252129|ref|ZP_07534028.1| Cold-shock DEAD box protein A [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306860429|gb|EFM92443.1| Cold-shock DEAD box protein A [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 596
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
QT+ G +ILVATDV GIDI+ +LV+ FD P SYV T
Sbjct: 263 QTLDKLKSGRLDILVATDVAARGIDIERISLVVNFDIPLDAESYVHRIGRT--------- 313
Query: 64 LSQYPKSERYLQYNSPKINRLLQ 86
+ +S R L + P+ RLL+
Sbjct: 314 -GRAGRSGRALLFVEPRERRLLR 335
>gi|307249783|ref|ZP_07531761.1| Cold-shock DEAD box protein A [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306858198|gb|EFM90276.1| Cold-shock DEAD box protein A [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 596
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
QT+ G +ILVATDV GIDI+ +LV+ FD P SYV T
Sbjct: 263 QTLDKLKSGRLDILVATDVAARGIDIERISLVVNFDIPLDAESYVHRIGRT--------- 313
Query: 64 LSQYPKSERYLQYNSPKINRLLQ 86
+ +S R L + P+ RLL+
Sbjct: 314 -GRAGRSGRALLFVEPRERRLLR 335
>gi|303251558|ref|ZP_07337732.1| cold-shock DEAD box protein-A [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302649556|gb|EFL79738.1| cold-shock DEAD box protein-A [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 619
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
QT+ G +ILVATDV GIDI+ +LV+ FD P SYV T
Sbjct: 286 QTLDKLKSGRLDILVATDVAARGIDIERISLVVNFDIPLDAESYVHRIGRT--------- 336
Query: 64 LSQYPKSERYLQYNSPKINRLLQ 86
+ +S R L + P+ RLL+
Sbjct: 337 -GRAGRSGRALLFVEPRERRLLR 358
>gi|421736372|ref|ZP_16175189.1| ATP-dependent RNA helicase, partial [Bifidobacterium bifidum IPLA
20015]
gi|407296340|gb|EKF15905.1| ATP-dependent RNA helicase, partial [Bifidobacterium bifidum IPLA
20015]
Length = 492
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFT 54
+ +L+F +G+ +LVATDV GID+ LV++ DPP +S++ T
Sbjct: 351 RNLLAFEKGLVRVLVATDVAARGIDVHDVTLVVQTDPPADPKSFLHRSGRT 401
>gi|343497962|ref|ZP_08736013.1| ATP-dependent RNA helicase [Vibrio nigripulchritudo ATCC 27043]
gi|342815809|gb|EGU50718.1| ATP-dependent RNA helicase [Vibrio nigripulchritudo ATCC 27043]
Length = 262
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI S VI FD P+HT YV
Sbjct: 106 MSQFERHVFKILVTTDVASRGLDIASVTHVINFDMPKHTEEYVH 149
>gi|165975989|ref|YP_001651582.1| cold-shock DEAD box protein-A [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|165876090|gb|ABY69138.1| cold-shock DEAD box protein-A [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 619
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
QT+ G +ILVATDV GIDI+ +LV+ FD P SYV T
Sbjct: 286 QTLDKLKSGRLDILVATDVAARGIDIERISLVVNFDIPLDAESYVHRIGRT--------- 336
Query: 64 LSQYPKSERYLQYNSPKINRLLQ 86
+ +S R L + P+ RLL+
Sbjct: 337 -GRAGRSGRALLFVEPRERRLLR 358
>gi|68472255|ref|XP_719923.1| hypothetical protein CaO19.6831 [Candida albicans SC5314]
gi|68472490|ref|XP_719806.1| hypothetical protein CaO19.14123 [Candida albicans SC5314]
gi|74656514|sp|Q5ADL0.1|PRP5_CANAL RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|46441642|gb|EAL00938.1| hypothetical protein CaO19.14123 [Candida albicans SC5314]
gi|46441768|gb|EAL01063.1| hypothetical protein CaO19.6831 [Candida albicans SC5314]
Length = 884
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV 48
++ S + GI NIL+AT + G+D+++ LVI FDPP H YV
Sbjct: 597 IKEFASMDSGI-NILIATSIAARGLDVRNLGLVINFDPPNHMEDYV 641
>gi|358383044|gb|EHK20713.1| hypothetical protein TRIVIDRAFT_171147, partial [Trichoderma virens
Gv29-8]
Length = 1373
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ ++ F G TN L AT V EEGIDI C+++I+FD Y+QSK
Sbjct: 346 IMSLQKFRYGETNCLFATSVAEEGIDIPECDVIIRFDLYTSAIQYIQSKG 395
>gi|357628805|gb|EHJ77980.1| putative ATP-dependent RNA helicase DDX51 [Danaus plexippus]
Length = 625
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
F + N+++ TD L GIDI CN VI +DPP++ ++YV
Sbjct: 480 FKQSEINVIICTDALARGIDIPDCNYVISYDPPRNIKTYVH 520
>gi|301754659|ref|XP_002913145.1| PREDICTED: ATP-dependent RNA helicase DDX55-like [Ailuropoda
melanoleuca]
gi|281343809|gb|EFB19393.1| hypothetical protein PANDA_000939 [Ailuropoda melanoleuca]
Length = 600
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + F R + ILV TDV+ GIDI N V+++DPP ++V T + H
Sbjct: 309 KIFMEFRRSQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTARIGHGGSA 368
Query: 63 ILSQYPKSERYLQY 76
++ P E Y+ +
Sbjct: 369 LVFLLPMEESYINF 382
>gi|353227266|emb|CCA77779.1| hypothetical protein PIIN_03414 [Piriformospora indica DSM 11827]
Length = 1418
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F G N+++AT V EEG+D C+ V +FDPP+ Y+QS+
Sbjct: 416 KVVADFRMGGLNLIIATSVAEEGLDFPLCSFVCRFDPPRTLPQYIQSRG 464
>gi|313233376|emb|CBY24491.1| unnamed protein product [Oikopleura dioica]
Length = 985
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
++ + F +G N+L+AT + EEG+DI CNLV+++D + Q T +H
Sbjct: 457 LEQLEKFKKGDINVLIATSIGEEGLDISDCNLVVQYDHSNNQTRNAQRSGRTGRKHAGRI 516
Query: 63 ILSQYPK 69
I Y K
Sbjct: 517 IYLMYDK 523
>gi|336066886|ref|YP_004561744.1| ATP-dependent RNA helicase DeaD [Erysipelothrix rhusiopathiae str.
Fujisawa]
gi|334296832|dbj|BAK32703.1| ATP-dependent RNA helicase DeaD [Erysipelothrix rhusiopathiae str.
Fujisawa]
Length = 584
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 21/121 (17%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV-----------Q 49
M M F +G+ ++L+ATDV GID+ S ++VI +D PQ YV +
Sbjct: 279 MRSMVMSRFKKGMVSVLIATDVAARGIDVDSMDVVINYDIPQELEYYVHRIGRTGRAGKE 338
Query: 50 SKAFTVV----RHKAEQI--LSQYPKSERYL----QYNSPKINRLLQLLRRYNPDQRTII 99
A T+V R+ +QI LS E L Q N +++L + +R++N ++ +
Sbjct: 339 GLAITLVSRRQRYAIKQIERLSNSTIVETPLPTKEQLNDLMVDQLAREIRKWNDHEQGKL 398
Query: 100 F 100
F
Sbjct: 399 F 399
>gi|313222359|emb|CBY39301.1| unnamed protein product [Oikopleura dioica]
Length = 625
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
++ + F +G N+L+AT + EEG+DI CNLV+++D + Q T +H
Sbjct: 99 LEQLEKFKKGDINVLIATSIGEEGLDISDCNLVVQYDHSNNQTRNAQRSGRTGRKHAGRI 158
Query: 63 ILSQYPK 69
I Y K
Sbjct: 159 IYLMYDK 165
>gi|323342311|ref|ZP_08082543.1| DEAD/DEAH family ATP-dependent RNA helicase [Erysipelothrix
rhusiopathiae ATCC 19414]
gi|322463423|gb|EFY08617.1| DEAD/DEAH family ATP-dependent RNA helicase [Erysipelothrix
rhusiopathiae ATCC 19414]
Length = 594
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 21/121 (17%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV-----------Q 49
M M F +G+ ++L+ATDV GID+ S ++VI +D PQ YV +
Sbjct: 295 MRSMVMSRFKKGMVSVLIATDVAARGIDVDSMDVVINYDIPQELEYYVHRIGRTGRAGKE 354
Query: 50 SKAFTVV----RHKAEQI--LSQYPKSERYL----QYNSPKINRLLQLLRRYNPDQRTII 99
A T+V R+ +QI LS E L Q N +++L + +R++N ++ +
Sbjct: 355 GLAITLVSRRQRYAIKQIERLSNSTIVETPLPTKEQLNDLMVDQLAREIRKWNDHEQGKL 414
Query: 100 F 100
F
Sbjct: 415 F 415
>gi|18310378|ref|NP_562312.1| ATP-dependent RNA helicase [Clostridium perfringens str. 13]
gi|110801126|ref|YP_696091.1| DEAD/DEAH box helicase [Clostridium perfringens ATCC 13124]
gi|110803627|ref|YP_698708.1| DEAD-box ATP dependent DNA helicase [Clostridium perfringens SM101]
gi|422874320|ref|ZP_16920805.1| DEAD-box ATP dependent DNA helicase [Clostridium perfringens F262]
gi|18145058|dbj|BAB81102.1| ATP-dependent RNA helicase [Clostridium perfringens str. 13]
gi|110675773|gb|ABG84760.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Clostridium
perfringens ATCC 13124]
gi|110684128|gb|ABG87498.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Clostridium
perfringens SM101]
gi|380304797|gb|EIA17083.1| DEAD-box ATP dependent DNA helicase [Clostridium perfringens F262]
Length = 528
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 13/97 (13%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV-----------QSK 51
+QT+ F G + LVATDV GID++S VI +D PQ SYV +
Sbjct: 285 LQTLRKFKEGSLDFLVATDVAARGIDVESVTHVINYDLPQDNESYVHRIGRTGRANREGV 344
Query: 52 AFTVVRHKAEQILSQYPK--SERYLQYNSPKINRLLQ 86
A+++V K +L Q K + ++ P ++ + Q
Sbjct: 345 AYSLVTPKEYMMLKQIQKHTKSKIIRKAVPTVDEIFQ 381
>gi|403171947|ref|XP_003331125.2| hypothetical protein PGTG_13088 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169644|gb|EFP86706.2| hypothetical protein PGTG_13088 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1453
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+ + F G N+ +AT V EEG+D +SC +VI+FD + Y+QS+ R +
Sbjct: 421 KAVAKFRTGEYNLTIATSVAEEGLDFRSCRVVIRFDLITTWKGYIQSRGRARARESDYIV 480
Query: 64 LSQYPKSERYLQYNS 78
+ + +YL++
Sbjct: 481 MLPNGTTNKYLEFTG 495
>gi|46143724|ref|ZP_00134573.2| COG0513: Superfamily II DNA and RNA helicases [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208057|ref|YP_001053282.1| cold-shock DEAD box protein A-like protein [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|190149888|ref|YP_001968413.1| cold-shock DEAD box protein A-like protein [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303252206|ref|ZP_07338374.1| cold-shock DEAD box protein-A [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|126096849|gb|ABN73677.1| cold-shock DEAD box protein A-like protein [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|189915019|gb|ACE61271.1| cold-shock DEAD box protein A-like protein [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302648989|gb|EFL79177.1| cold-shock DEAD box protein-A [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
Length = 619
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
QT+ G +ILVATDV GIDI+ +LV+ FD P SYV T
Sbjct: 286 QTLDKLKSGRLDILVATDVAARGIDIERISLVVNFDIPLDAESYVHRIGRT--------- 336
Query: 64 LSQYPKSERYLQYNSPKINRLLQ 86
+ +S R L + P+ RLL+
Sbjct: 337 -GRAGRSGRALLFVEPRERRLLR 358
>gi|255079166|ref|XP_002503163.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
gi|226518429|gb|ACO64421.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
Length = 450
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHK---AEQILS 65
F G NILVATDV G+DI + ++VI +D PQ+++ YV T + A +++
Sbjct: 300 FKAGERNILVATDVASRGLDIPAVDVVINYDVPQNSKDYVHRVGRTARAGRSGLAITMVT 359
Query: 66 Q-----YPKSERYLQ-----YNSPKINRLLQLLRRYNPDQR 96
Q Y K ER +Q Y++P+ +L + R N QR
Sbjct: 360 QYDVELYQKIERLIQKKLDAYDAPE-EAVLLMNERVNEAQR 399
>gi|403179647|ref|XP_003337961.2| hypothetical protein PGTG_19538 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165151|gb|EFP93542.2| hypothetical protein PGTG_19538 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1460
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+ + F G N+ +AT V EEG+D +SC +VI+FD + Y+QS+ R +
Sbjct: 421 KAVAKFRTGEYNLTIATSVAEEGLDFRSCRVVIRFDLITTWKGYIQSRGRARARESDYIV 480
Query: 64 LSQYPKSERYLQYNS 78
+ + +YL++
Sbjct: 481 MLPNGTTNKYLEFTG 495
>gi|363582099|ref|ZP_09314909.1| DEAD/DEAH box helicase domain-containing protein [Flavobacteriaceae
bacterium HQM9]
Length = 452
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQILSQY 67
F G IL+ATDV+ GIDI S + VI D P + +Y+ T K IL
Sbjct: 289 FEEGDNRILIATDVMARGIDIDSVSQVISLDTPDYPENYIHRIGRTGRAEKKGSAILMTT 348
Query: 68 PKSERYLQ 75
PK YL+
Sbjct: 349 PKEMDYLE 356
>gi|421733952|ref|ZP_16173044.1| ATP-dependent RNA helicase [Bifidobacterium bifidum LMG 13195]
gi|407078099|gb|EKE50913.1| ATP-dependent RNA helicase [Bifidobacterium bifidum LMG 13195]
Length = 681
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFT 54
+ +L+F +G+ +LVATDV GID+ LV++ DPP +S++ T
Sbjct: 351 RNLLAFEKGLVRVLVATDVAARGIDVHDVTLVVQTDPPADPKSFLHRSGRT 401
>gi|255691877|ref|ZP_05415552.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacteroides
finegoldii DSM 17565]
gi|260622430|gb|EEX45301.1| DEAD/DEAH box helicase [Bacteroides finegoldii DSM 17565]
Length = 421
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 25/45 (55%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F G NILVATD++ GIDI LVI FD P + YV
Sbjct: 286 VMHEFKAGRVNILVATDIVARGIDIDDIRLVINFDVPHDSEDYVH 330
>gi|345493218|ref|XP_001605403.2| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Nasonia
vitripennis]
Length = 574
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G ILVATDV G+D++ VI FD P + YV T R K + +
Sbjct: 402 FRSGKAPILVATDVAARGLDVEDVKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFT 461
Query: 69 KSERYLQYNSPKINRLLQLLRRYN 92
S N+ K N L+Q+L+ N
Sbjct: 462 PS------NAGKANDLVQVLKEAN 479
>gi|310287881|ref|YP_003939139.1| Superfamily II DNA and RNA helicase [Bifidobacterium bifidum S17]
gi|309251817|gb|ADO53565.1| Superfamily II DNA and RNA helicase [Bifidobacterium bifidum S17]
Length = 681
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFT 54
+ +L+F +G+ +LVATDV GID+ LV++ DPP +S++ T
Sbjct: 351 RNLLAFEKGLVRVLVATDVAARGIDVHDVTLVVQTDPPADPKSFLHRSGRT 401
>gi|110638001|ref|YP_678208.1| ATP-dependent RNA helicase [Cytophaga hutchinsonii ATCC 33406]
gi|110280682|gb|ABG58868.1| ATP-dependent RNA helicase (cold-shock DEAD-box protein A)
[Cytophaga hutchinsonii ATCC 33406]
Length = 580
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 11/64 (17%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ-----------SKA 52
+ M F +G+ NILVATDV GID+ + VI +D P +YV K+
Sbjct: 281 EVMSKFRKGLANILVATDVAARGIDVTGVDAVINYDVPLDIENYVHRIGRTGRAGQLGKS 340
Query: 53 FTVV 56
FT+V
Sbjct: 341 FTLV 344
>gi|313141010|ref|ZP_07803203.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
gi|313133520|gb|EFR51137.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
Length = 681
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFT 54
+ +L+F +G+ +LVATDV GID+ LV++ DPP +S++ T
Sbjct: 351 RNLLAFEKGLVRVLVATDVAARGIDVHDVTLVVQTDPPADPKSFLHRSGRT 401
>gi|423299961|ref|ZP_17277986.1| hypothetical protein HMPREF1057_01127 [Bacteroides finegoldii
CL09T03C10]
gi|408473770|gb|EKJ92292.1| hypothetical protein HMPREF1057_01127 [Bacteroides finegoldii
CL09T03C10]
Length = 421
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 25/45 (55%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F G NILVATD++ GIDI LVI FD P + YV
Sbjct: 286 VMHEFKAGRVNILVATDIVARGIDIDDIRLVINFDVPHDSEDYVH 330
>gi|402577642|gb|EJW71598.1| hypothetical protein WUBG_17497, partial [Wuchereria bancrofti]
Length = 66
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 28/45 (62%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
T+ F G IL T V EEGIDIQ CNLVIK+D + ++VQ
Sbjct: 18 TLARFTSGDIKILCVTSVAEEGIDIQKCNLVIKYDYVTNEIAHVQ 62
>gi|326528935|dbj|BAJ97489.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 221
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
V M F G + IL++TD+L GIDIQ NL+I +D P T Y+
Sbjct: 126 VNVMKEFRSGSSRILISTDLLGRGIDIQQVNLIINYDLPTDTAKYIH 172
>gi|350631467|gb|EHA19838.1| hypothetical protein ASPNIDRAFT_119009 [Aspergillus niger ATCC
1015]
Length = 1232
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+T+ F +G N+++ TD LEEGID+ +CN V+ F+ +S++Q +
Sbjct: 348 ETLEKFRQGSLNLIITTDALEEGIDVPACNTVLNFNCQLSLKSFIQRRG 396
>gi|311064761|ref|YP_003971486.1| ATP-dependent RNA helicase [Bifidobacterium bifidum PRL2010]
gi|310867080|gb|ADP36449.1| ATP-dependent RNA helicase [Bifidobacterium bifidum PRL2010]
Length = 681
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFT 54
+ +L+F +G+ +LVATDV GID+ LV++ DPP +S++ T
Sbjct: 351 RNLLAFEKGLVRVLVATDVAARGIDVHDVTLVVQTDPPADPKSFLHRSGRT 401
>gi|256089611|ref|XP_002580881.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 151
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M +F G + IL++TD+L GID+Q +LVI FD P + SY+
Sbjct: 107 MTAFRSGSSRILISTDLLSRGIDVQQISLVINFDLPTNLESYIH 150
>gi|283131646|dbj|BAI63215.1| Dicer [Hemicentrotus pulcherrimus]
Length = 1816
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDI---QSCNLVIKFDPPQHTRSYVQSKA 52
+ + F R N+LVAT +E+G+++ CNLV++FD P +SY+QSKA
Sbjct: 539 EVLRKFRRREVNVLVATSSVEDGVELPRCNGCNLVVRFDRPASYQSYMQSKA 590
>gi|12845167|dbj|BAB26644.1| unnamed protein product [Mus musculus]
Length = 165
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
F +G +L++TD GID+Q LVI +D PQ+ R+YV T K Q +
Sbjct: 50 FEQGKIQLLISTDATARGIDVQGVELVINYDAPQYLRTYVHRVGRTARAGKTGQAFT 106
>gi|158706450|sp|A2QX45.2|DCL22_ASPNC RecName: Full=Dicer-like protein 2-2; Includes: RecName:
Full=Endoribonuclease dcl2-2; Includes: RecName:
Full=ATP-dependent helicase dcl2-2
Length = 1362
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+T+ F +G N+++ TD LEEGID+ +CN V+ F+ +S++Q +
Sbjct: 413 ETLEKFRQGSLNLIITTDALEEGIDVPACNTVLNFNCQLSLKSFIQRRG 461
>gi|344171941|emb|CCA84567.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia syzygii R24]
Length = 481
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
+QT+ +F +G ++LVATDV G+DI VI FD P + YV T +
Sbjct: 291 MQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGD 350
Query: 63 ILSQY-PKSERYL 74
LS + P ER L
Sbjct: 351 ALSLFAPGDERLL 363
>gi|134079420|emb|CAK40801.1| unnamed protein product [Aspergillus niger]
Length = 1379
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+T+ F +G N+++ TD LEEGID+ +CN V+ F+ +S++Q +
Sbjct: 430 ETLEKFRQGSLNLIITTDALEEGIDVPACNTVLNFNCQLSLKSFIQRRG 478
>gi|424035433|ref|ZP_17774676.1| helicase conserved C-terminal domain protein [Vibrio cholerae
HENC-02]
gi|408897797|gb|EKM33452.1| helicase conserved C-terminal domain protein [Vibrio cholerae
HENC-02]
Length = 178
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI + VI FD P+HT YV
Sbjct: 24 MSQFERAVFKILVTTDVASRGLDIATVTHVINFDMPKHTEEYVH 67
>gi|393784034|ref|ZP_10372203.1| hypothetical protein HMPREF1071_03071 [Bacteroides salyersiae
CL02T12C01]
gi|392667693|gb|EIY61200.1| hypothetical protein HMPREF1071_03071 [Bacteroides salyersiae
CL02T12C01]
Length = 415
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F G NILVATD++ GIDI LVI FD P + YV
Sbjct: 287 MHEFKSGRINILVATDIVSRGIDIDDIRLVINFDVPHDSEDYVH 330
>gi|329954895|ref|ZP_08295912.1| DEAD/DEAH box helicase [Bacteroides clarus YIT 12056]
gi|328526999|gb|EGF54010.1| DEAD/DEAH box helicase [Bacteroides clarus YIT 12056]
Length = 499
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ M F G NILVATD++ GIDI LVI +D P + YV
Sbjct: 349 EVMYEFKAGRVNILVATDIVARGIDIDDIRLVINYDVPHDSEDYVH 394
>gi|256073063|ref|XP_002572852.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|350646414|emb|CCD58911.1| DEAD box ATP-dependent RNA helicase, putative [Schistosoma mansoni]
Length = 769
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 11/66 (16%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ-----------SKAF 53
T+ +F G NILVATDV G+DI + V+ FD P T Y+ AF
Sbjct: 378 TLANFKSGRMNILVATDVASRGLDIDNIEYVVNFDFPNQTEDYIHRIGRTARSDKTGTAF 437
Query: 54 TVVRHK 59
T HK
Sbjct: 438 TFFTHK 443
>gi|308809810|ref|XP_003082214.1| MGC81303 protein (ISS) [Ostreococcus tauri]
gi|116060682|emb|CAL57160.1| MGC81303 protein (ISS), partial [Ostreococcus tauri]
Length = 382
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ + F G NIL+ATDV G+DI S ++VI +D PQ+++ YV
Sbjct: 298 IAALQKFKAGERNILIATDVASRGLDIPSVDVVINYDVPQNSKDYVH 344
>gi|299066188|emb|CBJ37372.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia solanacearum
CMR15]
Length = 481
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
+QT+ +F +G ++LVATDV G+DI VI FD P + YV T +
Sbjct: 291 MQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGD 350
Query: 63 ILSQY-PKSERYL 74
LS + P ER L
Sbjct: 351 ALSLFAPGDERLL 363
>gi|114667313|ref|XP_001167051.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 isoform 5 [Pan
troglodytes]
gi|410209926|gb|JAA02182.1| DEXH (Asp-Glu-X-His) box polypeptide 58 [Pan troglodytes]
gi|410259426|gb|JAA17679.1| DEXH (Asp-Glu-X-His) box polypeptide 58 [Pan troglodytes]
gi|410297276|gb|JAA27238.1| DEXH (Asp-Glu-X-His) box polypeptide 58 [Pan troglodytes]
gi|410330751|gb|JAA34322.1| DEXH (Asp-Glu-X-His) box polypeptide 58 [Pan troglodytes]
Length = 678
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G N+LVAT V EEG+DI CN+V+++ + S VQ++ R +A+Q + +
Sbjct: 427 FQDGTLNLLVATSVAEEGLDIPHCNVVVRYGLLTNEISMVQARG----RARADQSVYAFV 482
Query: 69 KSERYLQYNSPKINRLLQLL 88
+E + IN L+ L
Sbjct: 483 ATEGSRELKRELINEALETL 502
>gi|184200206|ref|YP_001854413.1| ATP-dependent DEAD-box RNA helicase DeaD [Kocuria rhizophila
DC2201]
gi|183580436|dbj|BAG28907.1| ATP-dependent DEAD-box RNA helicase DeaD [Kocuria rhizophila
DC2201]
Length = 719
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFT-VVRHKAEQ 62
+T+ S G +ILVATDV G+D++ +LV+ +D P T SYV T K E
Sbjct: 362 RTVDSLREGKIDILVATDVAARGLDVERISLVVNYDIPHDTESYVHRIGRTGRAGRKGEA 421
Query: 63 ILSQYPKSERYL 74
IL P+ E+YL
Sbjct: 422 ILFMTPR-EKYL 432
>gi|84385387|ref|ZP_00988419.1| ATP-dependent RNA helicase, DEAD box family [Vibrio splendidus
12B01]
gi|84379984|gb|EAP96835.1| ATP-dependent RNA helicase, DEAD box family [Vibrio splendidus
12B01]
Length = 443
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 26/44 (59%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV GIDI + + VI FD P+HT YV
Sbjct: 289 MSQFERAVYKILVTTDVASRGIDIPNVSHVINFDMPKHTEEYVH 332
>gi|17546930|ref|NP_520332.1| ATP-dependent RNA helicase [Ralstonia solanacearum GMI1000]
gi|17429230|emb|CAD15918.1| probable atp-dependent rna helicase protein [Ralstonia solanacearum
GMI1000]
Length = 495
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
+QT+ +F +G ++LVATDV G+DI VI FD P + YV T +
Sbjct: 305 MQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGD 364
Query: 63 ILSQY-PKSERYL 74
LS + P ER L
Sbjct: 365 ALSLFAPGDERLL 377
>gi|399218638|emb|CCF75525.1| unnamed protein product [Babesia microti strain RI]
Length = 522
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV--VRHKAE 61
T SF + + IL+ TDV G+DI + + +I++DPP R Y+ T K
Sbjct: 337 NTFYSFCKSESGILLCTDVAARGLDIPNVDWIIQYDPPDDPREYIHRVGRTARGAGGKGR 396
Query: 62 QILSQYPKSERYLQY 76
IL P+ +LQY
Sbjct: 397 AILFLMPEEIDFLQY 411
>gi|407068947|ref|ZP_11099785.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrio
cyclitrophicus ZF14]
Length = 443
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 26/44 (59%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV GIDI + + VI FD P+HT YV
Sbjct: 289 MSQFERAVYKILVTTDVASRGIDIPNVSHVINFDMPKHTEEYVH 332
>gi|145352838|ref|XP_001420742.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580977|gb|ABO99035.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 413
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
F +G T +LVATDV G+D++ CNLVI +D P YV
Sbjct: 294 FRQGRTPVLVATDVAARGLDVKDCNLVINYDFPNQIEDYVH 334
>gi|402079303|gb|EJT74568.1| dicer-like protein 1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1607
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ SF N L AT + EEG+DI CNLVI+FD + T Y+QS+
Sbjct: 572 TVWSFRLRELNCLFATSIAEEGLDIPGCNLVIRFDLHKTTIQYIQSRG 619
>gi|397485570|ref|XP_003813916.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 isoform 1 [Pan
paniscus]
Length = 678
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G N+LVAT V EEG+DI CN+V+++ + S VQ++ R +A+Q + +
Sbjct: 427 FQDGTLNLLVATSVAEEGLDIPHCNVVVRYGLLTNEISMVQARG----RARADQSVYAFV 482
Query: 69 KSERYLQYNSPKINRLLQLL 88
+E + IN L+ L
Sbjct: 483 ATEGSRELKRELINEALETL 502
>gi|390937300|ref|YP_006394859.1| putative ATP-dependent RNA helicase [Bifidobacterium bifidum BGN4]
gi|389890913|gb|AFL04980.1| putative ATP-dependent RNA helicase [Bifidobacterium bifidum BGN4]
Length = 664
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFT 54
+ +L+F +G+ +LVATDV GID+ LV++ DPP +S++ T
Sbjct: 334 RNLLAFEKGLVRVLVATDVAARGIDVHDVTLVVQTDPPADPKSFLHRSGRT 384
>gi|300690871|ref|YP_003751866.1| DEAD/DEAH box helicase [Ralstonia solanacearum PSI07]
gi|299077931|emb|CBJ50571.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia solanacearum
PSI07]
gi|344167288|emb|CCA79493.1| ATP-dependent RNA helicase, deaD-box family [blood disease
bacterium R229]
Length = 495
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
+QT+ +F +G ++LVATDV G+DI VI FD P + YV T +
Sbjct: 305 MQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGD 364
Query: 63 ILSQY-PKSERYL 74
LS + P ER L
Sbjct: 365 ALSLFAPGDERLL 377
>gi|426348251|ref|XP_004041751.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 [Gorilla
gorilla gorilla]
Length = 678
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G N+LVAT V EEG+DI CN+V+++ + S VQ++ R +A+Q + +
Sbjct: 427 FQDGTLNLLVATSVAEEGLDIPHCNVVVRYGLLTNEISMVQARG----RARADQSVYAFV 482
Query: 69 KSERYLQYNSPKINRLLQLL 88
+E + IN L+ L
Sbjct: 483 ATEGSRELKRELINEALETL 502
>gi|312130721|ref|YP_003998061.1| dead/deah box helicase domain-containing protein [Leadbetterella
byssophila DSM 17132]
gi|311907267|gb|ADQ17708.1| DEAD/DEAH box helicase domain protein [Leadbetterella byssophila
DSM 17132]
Length = 400
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 26/41 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
F G NILVATDVL GIDI + NLV+ FD P+ Y+
Sbjct: 288 FKAGKFNILVATDVLSRGIDISNLNLVVNFDVPRDAEDYIH 328
>gi|298385617|ref|ZP_06995175.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 1_1_14]
gi|298261758|gb|EFI04624.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 1_1_14]
Length = 413
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 25/45 (55%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F G NILVATD++ GIDI LVI FD P + YV
Sbjct: 286 VMHEFKAGRINILVATDIVARGIDIDDIRLVINFDVPHDSEDYVH 330
>gi|149187436|ref|ZP_01865734.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrio
shilonii AK1]
gi|148838972|gb|EDL55911.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrio
shilonii AK1]
Length = 442
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV GIDI S VI FD P+HT YV
Sbjct: 289 MSQFERHVFKILVTTDVASRGIDIASVTHVINFDMPKHTEEYVH 332
>gi|83746502|ref|ZP_00943553.1| ATP-dependent RNA helicase [Ralstonia solanacearum UW551]
gi|83726833|gb|EAP73960.1| ATP-dependent RNA helicase [Ralstonia solanacearum UW551]
Length = 566
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
+QT+ +F +G ++LVATDV G+DI VI FD P + YV T +
Sbjct: 376 MQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGD 435
Query: 63 ILSQY-PKSERYL 74
LS + P ER L
Sbjct: 436 ALSLFAPGDERLL 448
>gi|390332898|ref|XP_790894.2| PREDICTED: endoribonuclease Dicer-like [Strongylocentrotus
purpuratus]
Length = 1815
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDI---QSCNLVIKFDPPQHTRSYVQSKA 52
+ + F R N+LVAT +E+G+++ CNLV++FD P +SY+QSKA
Sbjct: 538 EVLRKFRRREVNVLVATSSVEDGVELPRCNGCNLVVRFDRPTSYQSYMQSKA 589
>gi|241663607|ref|YP_002981967.1| DEAD/DEAH box helicase [Ralstonia pickettii 12D]
gi|240865634|gb|ACS63295.1| DEAD/DEAH box helicase domain protein [Ralstonia pickettii 12D]
Length = 493
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
+QT+ +F +G ++LVATDV G+DI VI FD P + YV T +
Sbjct: 303 MQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGD 362
Query: 63 ILSQY-PKSERYL 74
LS + P ER L
Sbjct: 363 ALSLFAPGDERLL 375
>gi|320035561|gb|EFW17502.1| RNA helicase/RNAse III [Coccidioides posadasii str. Silveira]
Length = 1448
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
G ++++AT VLEEGID+ C+LVI FD P+ RS++Q +
Sbjct: 478 GKKDLIIATAVLEEGIDVPICDLVICFDLPKDLRSFIQRRG 518
>gi|303315249|ref|XP_003067632.1| Type III restriction enzyme, res subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240107302|gb|EER25487.1| Type III restriction enzyme, res subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 1448
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
G ++++AT VLEEGID+ C+LVI FD P+ RS++Q +
Sbjct: 478 GKKDLIIATAVLEEGIDVPICDLVICFDLPKDLRSFIQRRG 518
>gi|423277384|ref|ZP_17256298.1| hypothetical protein HMPREF1203_00515 [Bacteroides fragilis HMW
610]
gi|404587133|gb|EKA91683.1| hypothetical protein HMPREF1203_00515 [Bacteroides fragilis HMW
610]
Length = 418
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F G NILVATD++ GIDI LVI FD P + YV
Sbjct: 287 MHEFKSGRINILVATDIVSRGIDIDDIRLVINFDVPHDSEDYVH 330
>gi|194374847|dbj|BAG62538.1| unnamed protein product [Homo sapiens]
Length = 661
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G N+LVAT V EEG+DI CN+V+++ + S VQ++ R +A+Q + +
Sbjct: 410 FQDGTLNLLVATSVAEEGLDIPHCNVVVRYGLLTNEISMVQARG----RARADQSVYAFV 465
Query: 69 KSERYLQYNSPKINRLLQLL 88
+E + IN L+ L
Sbjct: 466 ATEGSRELKRELINEALETL 485
>gi|187929488|ref|YP_001899975.1| DEAD/DEAH box helicase [Ralstonia pickettii 12J]
gi|404396603|ref|ZP_10988397.1| hypothetical protein HMPREF0989_03294 [Ralstonia sp. 5_2_56FAA]
gi|187726378|gb|ACD27543.1| DEAD/DEAH box helicase domain protein [Ralstonia pickettii 12J]
gi|348613693|gb|EGY63272.1| hypothetical protein HMPREF0989_03294 [Ralstonia sp. 5_2_56FAA]
Length = 493
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
+QT+ +F +G ++LVATDV G+DI VI FD P + YV T +
Sbjct: 303 MQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGD 362
Query: 63 ILSQY-PKSERYL 74
LS + P ER L
Sbjct: 363 ALSLFAPGDERLL 375
>gi|53713588|ref|YP_099580.1| ATP-dependent RNA helicase [Bacteroides fragilis YCH46]
gi|60681868|ref|YP_212012.1| ATP-dependent RNA helicase [Bacteroides fragilis NCTC 9343]
gi|265763909|ref|ZP_06092477.1| ATP-dependent RNA helicase [Bacteroides sp. 2_1_16]
gi|336409944|ref|ZP_08590426.1| hypothetical protein HMPREF1018_02442 [Bacteroides sp. 2_1_56FAA]
gi|375358679|ref|YP_005111451.1| putative ATP-dependent RNA helicase [Bacteroides fragilis 638R]
gi|383118552|ref|ZP_09939293.1| hypothetical protein BSHG_2552 [Bacteroides sp. 3_2_5]
gi|423250187|ref|ZP_17231203.1| hypothetical protein HMPREF1066_02213 [Bacteroides fragilis
CL03T00C08]
gi|423255690|ref|ZP_17236619.1| hypothetical protein HMPREF1067_03263 [Bacteroides fragilis
CL03T12C07]
gi|423257252|ref|ZP_17238175.1| hypothetical protein HMPREF1055_00452 [Bacteroides fragilis
CL07T00C01]
gi|423265778|ref|ZP_17244781.1| hypothetical protein HMPREF1056_02468 [Bacteroides fragilis
CL07T12C05]
gi|423271549|ref|ZP_17250519.1| hypothetical protein HMPREF1079_03601 [Bacteroides fragilis
CL05T00C42]
gi|423275547|ref|ZP_17254491.1| hypothetical protein HMPREF1080_03144 [Bacteroides fragilis
CL05T12C13]
gi|423284322|ref|ZP_17263206.1| hypothetical protein HMPREF1204_02744 [Bacteroides fragilis HMW
615]
gi|52216453|dbj|BAD49046.1| ATP-dependent RNA helicase [Bacteroides fragilis YCH46]
gi|60493302|emb|CAH08086.1| putative ATP-dependent RNA helicase [Bacteroides fragilis NCTC
9343]
gi|251945856|gb|EES86263.1| hypothetical protein BSHG_2552 [Bacteroides sp. 3_2_5]
gi|263256517|gb|EEZ27863.1| ATP-dependent RNA helicase [Bacteroides sp. 2_1_16]
gi|301163360|emb|CBW22910.1| putative ATP-dependent RNA helicase [Bacteroides fragilis 638R]
gi|335946325|gb|EGN08131.1| hypothetical protein HMPREF1018_02442 [Bacteroides sp. 2_1_56FAA]
gi|387778728|gb|EIK40823.1| hypothetical protein HMPREF1055_00452 [Bacteroides fragilis
CL07T00C01]
gi|392650483|gb|EIY44151.1| hypothetical protein HMPREF1067_03263 [Bacteroides fragilis
CL03T12C07]
gi|392653762|gb|EIY47414.1| hypothetical protein HMPREF1066_02213 [Bacteroides fragilis
CL03T00C08]
gi|392697245|gb|EIY90431.1| hypothetical protein HMPREF1079_03601 [Bacteroides fragilis
CL05T00C42]
gi|392701723|gb|EIY94879.1| hypothetical protein HMPREF1080_03144 [Bacteroides fragilis
CL05T12C13]
gi|392703436|gb|EIY96580.1| hypothetical protein HMPREF1056_02468 [Bacteroides fragilis
CL07T12C05]
gi|404579990|gb|EKA84702.1| hypothetical protein HMPREF1204_02744 [Bacteroides fragilis HMW
615]
Length = 418
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F G NILVATD++ GIDI LVI FD P + YV
Sbjct: 287 MHEFKSGRINILVATDIVSRGIDIDDIRLVINFDVPHDSEDYVH 330
>gi|149408122|ref|NP_077024.2| probable ATP-dependent RNA helicase DHX58 [Homo sapiens]
gi|50401123|sp|Q96C10.1|DHX58_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DHX58; AltName:
Full=Probable ATP-dependent helicase LGP2; AltName:
Full=Protein D11Lgp2 homolog; AltName: Full=RIG-I-like
receptor 3; Short=RLR-3; AltName: Full=RIG-I-like
receptor LGP2; Short=RLR
gi|15928965|gb|AAH14949.1| DEXH (Asp-Glu-X-His) box polypeptide 58 [Homo sapiens]
gi|119581201|gb|EAW60797.1| likely ortholog of mouse D11lgp2, isoform CRA_b [Homo sapiens]
gi|119581202|gb|EAW60798.1| likely ortholog of mouse D11lgp2, isoform CRA_b [Homo sapiens]
gi|325463123|gb|ADZ15332.1| DEXH (Asp-Glu-X-His) box polypeptide 58 [synthetic construct]
Length = 678
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G N+LVAT V EEG+DI CN+V+++ + S VQ++ R +A+Q + +
Sbjct: 427 FQDGTLNLLVATSVAEEGLDIPHCNVVVRYGLLTNEISMVQARG----RARADQSVYAFV 482
Query: 69 KSERYLQYNSPKINRLLQLL 88
+E + IN L+ L
Sbjct: 483 ATEGSRELKRELINEALETL 502
>gi|260820656|ref|XP_002605650.1| hypothetical protein BRAFLDRAFT_232791 [Branchiostoma floridae]
gi|229290985|gb|EEN61660.1| hypothetical protein BRAFLDRAFT_232791 [Branchiostoma floridae]
Length = 449
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQILSQY 67
F + + +LV TDV+ G+DI N V++FDPP + ++V T + + ++
Sbjct: 310 FRQAESGVLVCTDVMARGVDIPEVNWVLQFDPPSNASAFVHRSGRTARMGREGSAVVFLL 369
Query: 68 PKSERYLQY 76
P+ + Y+++
Sbjct: 370 PEEDTYIEF 378
>gi|119478976|ref|XP_001259517.1| RNase3 domain protein [Neosartorya fischeri NRRL 181]
gi|158706438|sp|A1DE13.1|DCL1_NEOFI RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
gi|119407671|gb|EAW17620.1| RNase3 domain protein [Neosartorya fischeri NRRL 181]
Length = 1538
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
++ F G N L AT V EEG+DI CNLV++FD + YVQS+
Sbjct: 524 ALVKFRTGEINCLFATSVAEEGLDIPDCNLVVRFDLYRTLIQYVQSRG 571
>gi|410659385|ref|YP_006911756.1| Cold-shock DEAD-box protein A [Dehalobacter sp. DCA]
gi|410662371|ref|YP_006914742.1| Cold-shock DEAD-box protein A [Dehalobacter sp. CF]
gi|409021740|gb|AFV03771.1| Cold-shock DEAD-box protein A [Dehalobacter sp. DCA]
gi|409024727|gb|AFV06757.1| Cold-shock DEAD-box protein A [Dehalobacter sp. CF]
Length = 471
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 29/60 (48%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
M F G+T ILVATDV G+DI V FD PQ SYV T K Q ++
Sbjct: 283 MRHFKEGLTEILVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKGGQAIT 342
>gi|367045744|ref|XP_003653252.1| hypothetical protein THITE_2048914 [Thielavia terrestris NRRL 8126]
gi|347000514|gb|AEO66916.1| hypothetical protein THITE_2048914 [Thielavia terrestris NRRL 8126]
Length = 1591
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSK-----AFTVVR 57
V T++ F +G N + AT V EEG+DI CN++I++D Y+QS+ A +V
Sbjct: 538 VLTIIKFKKGELNCIFATSVAEEGLDIPDCNVIIRYDLNDTLIQYIQSRGRARQAGSVYI 597
Query: 58 HKAEQ 62
H AE+
Sbjct: 598 HMAEK 602
>gi|298484048|ref|ZP_07002217.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. D22]
gi|336402162|ref|ZP_08582904.1| hypothetical protein HMPREF0127_00217 [Bacteroides sp. 1_1_30]
gi|423213649|ref|ZP_17200178.1| hypothetical protein HMPREF1074_01710 [Bacteroides xylanisolvens
CL03T12C04]
gi|298269829|gb|EFI11421.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. D22]
gi|335944483|gb|EGN06304.1| hypothetical protein HMPREF0127_00217 [Bacteroides sp. 1_1_30]
gi|392693578|gb|EIY86809.1| hypothetical protein HMPREF1074_01710 [Bacteroides xylanisolvens
CL03T12C04]
Length = 420
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 25/45 (55%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F G NILVATD++ GIDI LVI FD P + YV
Sbjct: 286 VMHEFKAGRINILVATDIVARGIDIDDIRLVINFDVPHDSEDYVH 330
>gi|313147103|ref|ZP_07809296.1| ATP-dependent RNA helicase [Bacteroides fragilis 3_1_12]
gi|424663494|ref|ZP_18100531.1| hypothetical protein HMPREF1205_03880 [Bacteroides fragilis HMW
616]
gi|313135870|gb|EFR53230.1| ATP-dependent RNA helicase [Bacteroides fragilis 3_1_12]
gi|404577184|gb|EKA81922.1| hypothetical protein HMPREF1205_03880 [Bacteroides fragilis HMW
616]
Length = 418
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F G NILVATD++ GIDI LVI FD P + YV
Sbjct: 287 MHEFKSGRINILVATDIVSRGIDIDDIRLVINFDVPHDSEDYVH 330
>gi|47682722|gb|AAH69876.1| Ddx51 protein, partial [Mus musculus]
Length = 260
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
F +G +L++TD GID+Q LVI +D PQ+ R+YV T K Q +
Sbjct: 145 FEQGKIQLLISTDATARGIDVQGVELVINYDAPQYLRTYVHRVGRTARAGKTGQAFT 201
>gi|309781736|ref|ZP_07676469.1| ATP-dependent RNA helicase [Ralstonia sp. 5_7_47FAA]
gi|308919377|gb|EFP65041.1| ATP-dependent RNA helicase [Ralstonia sp. 5_7_47FAA]
Length = 498
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
+QT+ +F +G ++LVATDV G+DI VI FD P + YV T +
Sbjct: 308 MQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGD 367
Query: 63 ILSQY-PKSERYL 74
LS + P ER L
Sbjct: 368 ALSLFAPGDERLL 380
>gi|29346241|ref|NP_809744.1| ATP-dependent RNA helicase [Bacteroides thetaiotaomicron VPI-5482]
gi|383122509|ref|ZP_09943201.1| hypothetical protein BSIG_0752 [Bacteroides sp. 1_1_6]
gi|29338136|gb|AAO75938.1| ATP-dependent RNA helicase [Bacteroides thetaiotaomicron VPI-5482]
gi|251842399|gb|EES70479.1| hypothetical protein BSIG_0752 [Bacteroides sp. 1_1_6]
Length = 422
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 25/45 (55%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F G NILVATD++ GIDI LVI FD P + YV
Sbjct: 286 VMHEFKAGRINILVATDIVARGIDIDDIRLVINFDVPHDSEDYVH 330
>gi|417948503|ref|ZP_12591648.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrio
splendidus ATCC 33789]
gi|342809673|gb|EGU44783.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrio
splendidus ATCC 33789]
Length = 443
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 26/44 (59%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV GIDI + + VI FD P+HT YV
Sbjct: 289 MSQFERAVYKILVTTDVASRGIDIPNVSHVINFDMPKHTEEYVH 332
>gi|300703503|ref|YP_003745105.1| ATP-dependent RNA helicase, dead-box family [Ralstonia solanacearum
CFBP2957]
gi|299071166|emb|CBJ42480.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia solanacearum
CFBP2957]
Length = 495
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
+QT+ +F +G ++LVATDV G+DI VI FD P + YV T +
Sbjct: 305 MQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGD 364
Query: 63 ILSQY-PKSERYL 74
LS + P ER L
Sbjct: 365 ALSLFAPGDERLL 377
>gi|262406616|ref|ZP_06083165.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294646166|ref|ZP_06723822.1| putative ATP-dependent RNA helicase DeaD [Bacteroides ovatus SD CC
2a]
gi|294807864|ref|ZP_06766646.1| putative ATP-dependent RNA helicase DeaD [Bacteroides xylanisolvens
SD CC 1b]
gi|345509298|ref|ZP_08788899.1| ATP-dependent RNA helicase [Bacteroides sp. D1]
gi|229446711|gb|EEO52502.1| ATP-dependent RNA helicase [Bacteroides sp. D1]
gi|262355319|gb|EEZ04410.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638495|gb|EFF56857.1| putative ATP-dependent RNA helicase DeaD [Bacteroides ovatus SD CC
2a]
gi|294444926|gb|EFG13611.1| putative ATP-dependent RNA helicase DeaD [Bacteroides xylanisolvens
SD CC 1b]
Length = 420
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 25/45 (55%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F G NILVATD++ GIDI LVI FD P + YV
Sbjct: 286 VMHEFKAGRINILVATDIVARGIDIDDIRLVINFDVPHDSEDYVH 330
>gi|207743814|ref|YP_002260206.1| atp-dependent rna helicase protein [Ralstonia solanacearum IPO1609]
gi|421897757|ref|ZP_16328124.1| atp-dependent rna helicase protein [Ralstonia solanacearum MolK2]
gi|206588963|emb|CAQ35925.1| atp-dependent rna helicase protein [Ralstonia solanacearum MolK2]
gi|206595214|emb|CAQ62141.1| atp-dependent rna helicase protein [Ralstonia solanacearum IPO1609]
Length = 495
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
+QT+ +F +G ++LVATDV G+DI VI FD P + YV T +
Sbjct: 305 MQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGD 364
Query: 63 ILSQY-PKSERYL 74
LS + P ER L
Sbjct: 365 ALSLFAPGDERLL 377
>gi|90408322|ref|ZP_01216486.1| ATP-dependent RNA helicase DeaD [Psychromonas sp. CNPT3]
gi|90310553|gb|EAS38674.1| ATP-dependent RNA helicase DeaD [Psychromonas sp. CNPT3]
Length = 579
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+T+ G +ILVATDV G+D++ +LV+ +D P T SYV T K +
Sbjct: 291 RTIARLKSGGLDILVATDVAARGLDVERISLVVNYDIPTDTESYVHRIGRTGRAGRKGKA 350
Query: 63 ILSQYPKSERYLQ 75
IL P+ R L+
Sbjct: 351 ILFAAPRERRLLK 363
>gi|442570278|sp|Q1DW80.3|DCL2_COCIM RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease DCL2; Includes: RecName:
Full=ATP-dependent helicase DCL2
gi|392868830|gb|EAS34630.2| dicer-like protein 2 [Coccidioides immitis RS]
Length = 1435
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
G ++++AT VLEEGID+ C+LVI FD P+ RS++Q +
Sbjct: 478 GKKDLIIATAVLEEGIDVPICDLVICFDLPKDLRSFIQRRG 518
>gi|386332888|ref|YP_006029057.1| atp-dependent rna helicase protein [Ralstonia solanacearum Po82]
gi|334195335|gb|AEG68520.1| atp-dependent rna helicase protein [Ralstonia solanacearum Po82]
Length = 495
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
+QT+ +F +G ++LVATDV G+DI VI FD P + YV T +
Sbjct: 305 MQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGD 364
Query: 63 ILSQY-PKSERYL 74
LS + P ER L
Sbjct: 365 ALSLFAPGDERLL 377
>gi|293373074|ref|ZP_06619442.1| DEAD/DEAH box helicase [Bacteroides ovatus SD CMC 3f]
gi|292631960|gb|EFF50570.1| DEAD/DEAH box helicase [Bacteroides ovatus SD CMC 3f]
Length = 422
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 25/45 (55%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F G NILVATD++ GIDI LVI FD P + YV
Sbjct: 286 VMHEFKAGRINILVATDIVARGIDIDDIRLVINFDVPHDSEDYVH 330
>gi|380695433|ref|ZP_09860292.1| ATP-dependent RNA helicase [Bacteroides faecis MAJ27]
Length = 422
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 25/45 (55%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F G NILVATD++ GIDI LVI FD P + YV
Sbjct: 286 VMHEFKAGRINILVATDIVARGIDIDDIRLVINFDVPHDSEDYVH 330
>gi|160884579|ref|ZP_02065582.1| hypothetical protein BACOVA_02566 [Bacteroides ovatus ATCC 8483]
gi|237718558|ref|ZP_04549039.1| ATP-dependent RNA helicase [Bacteroides sp. 2_2_4]
gi|299145716|ref|ZP_07038784.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacteroides sp.
3_1_23]
gi|336413268|ref|ZP_08593620.1| hypothetical protein HMPREF1017_00728 [Bacteroides ovatus
3_8_47FAA]
gi|383111896|ref|ZP_09932700.1| hypothetical protein BSGG_4556 [Bacteroides sp. D2]
gi|423286675|ref|ZP_17265526.1| hypothetical protein HMPREF1069_00569 [Bacteroides ovatus
CL02T12C04]
gi|423296461|ref|ZP_17274546.1| hypothetical protein HMPREF1070_03211 [Bacteroides ovatus
CL03T12C18]
gi|156110318|gb|EDO12063.1| DEAD/DEAH box helicase [Bacteroides ovatus ATCC 8483]
gi|229452018|gb|EEO57809.1| ATP-dependent RNA helicase [Bacteroides sp. 2_2_4]
gi|298516207|gb|EFI40088.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacteroides sp.
3_1_23]
gi|313697021|gb|EFS33856.1| hypothetical protein BSGG_4556 [Bacteroides sp. D2]
gi|335938312|gb|EGN00202.1| hypothetical protein HMPREF1017_00728 [Bacteroides ovatus
3_8_47FAA]
gi|392670184|gb|EIY63669.1| hypothetical protein HMPREF1070_03211 [Bacteroides ovatus
CL03T12C18]
gi|392675362|gb|EIY68804.1| hypothetical protein HMPREF1069_00569 [Bacteroides ovatus
CL02T12C04]
Length = 422
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 25/45 (55%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F G NILVATD++ GIDI LVI FD P + YV
Sbjct: 286 VMHEFKAGRINILVATDIVARGIDIDDIRLVINFDVPHDSEDYVH 330
>gi|119946809|ref|YP_944489.1| ATP-dependent RNA helicase [Psychromonas ingrahamii 37]
gi|119865413|gb|ABM04890.1| ATP-dependent RNA helicase CsdA [Psychromonas ingrahamii 37]
Length = 581
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+T+ G +ILVATDV G+D++ +LV+ +D P T SYV T K +
Sbjct: 294 RTIARLKSGGLDILVATDVAARGLDVERLSLVVNYDIPTDTESYVHRIGRTGRAGRKGKA 353
Query: 63 ILSQYPKSERYLQ 75
IL P+ R L+
Sbjct: 354 ILFAAPRERRLLK 366
>gi|421891297|ref|ZP_16322106.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia solanacearum
K60-1]
gi|378963340|emb|CCF98854.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia solanacearum
K60-1]
Length = 495
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
+QT+ +F +G ++LVATDV G+DI VI FD P + YV T +
Sbjct: 305 MQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGD 364
Query: 63 ILSQY-PKSERYL 74
LS + P ER L
Sbjct: 365 ALSLFAPGDERLL 377
>gi|153806359|ref|ZP_01959027.1| hypothetical protein BACCAC_00620 [Bacteroides caccae ATCC 43185]
gi|423218666|ref|ZP_17205162.1| hypothetical protein HMPREF1061_01935 [Bacteroides caccae
CL03T12C61]
gi|149131036|gb|EDM22242.1| DEAD/DEAH box helicase [Bacteroides caccae ATCC 43185]
gi|392628169|gb|EIY22204.1| hypothetical protein HMPREF1061_01935 [Bacteroides caccae
CL03T12C61]
Length = 420
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 25/45 (55%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F G NILVATD++ GIDI LVI FD P + YV
Sbjct: 286 VMHDFKAGRINILVATDIVARGIDIDDIRLVINFDVPHDSEDYVH 330
>gi|148974049|ref|ZP_01811582.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrionales
bacterium SWAT-3]
gi|145965746|gb|EDK30994.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrionales
bacterium SWAT-3]
Length = 443
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 26/44 (59%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV GIDI + + VI FD P+HT YV
Sbjct: 289 MSQFERAVYKILVTTDVASRGIDIPNVSHVINFDMPKHTEEYVH 332
>gi|119190771|ref|XP_001245992.1| hypothetical protein CIMG_05433 [Coccidioides immitis RS]
Length = 1435
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 12 GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
G ++++AT VLEEGID+ C+LVI FD P+ RS++Q +
Sbjct: 478 GKKDLIIATAVLEEGIDVPICDLVICFDLPKDLRSFIQRRG 518
>gi|346318279|gb|EGX87883.1| ATP-dependent RNA helicase DDX18 [Cordyceps militaris CM01]
Length = 597
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
T F+ IL+ TDV G+DI + + +++FDPP +TR Y+
Sbjct: 411 TFFEFSNAPNGILICTDVAARGLDIPAVDFIVQFDPPDNTRDYIH 455
>gi|86144589|ref|ZP_01062921.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrio sp.
MED222]
gi|85837488|gb|EAQ55600.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrio sp.
MED222]
Length = 443
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 26/44 (59%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV GIDI + + VI FD P+HT YV
Sbjct: 289 MSQFERAVYKILVTTDVASRGIDIPNVSHVINFDMPKHTEEYVH 332
>gi|167763057|ref|ZP_02435184.1| hypothetical protein BACSTE_01423 [Bacteroides stercoris ATCC
43183]
gi|167699397|gb|EDS15976.1| DEAD/DEAH box helicase [Bacteroides stercoris ATCC 43183]
Length = 430
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ M F G NILVATD++ GIDI LVI +D P + YV
Sbjct: 285 EVMYEFKAGRINILVATDIVARGIDIDDIRLVINYDVPHDSEDYVH 330
>gi|197098648|ref|NP_001124599.1| probable ATP-dependent RNA helicase DHX58 [Pongo abelii]
gi|55725102|emb|CAH89418.1| hypothetical protein [Pongo abelii]
Length = 678
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G N+LVAT V EEG+DI CN+V+++ + S VQ++ R +A+Q + +
Sbjct: 427 FRDGTLNLLVATSVAEEGLDIPHCNVVVRYGLLTNEISMVQARG----RARADQSVYSFV 482
Query: 69 KSERYLQYNSPKINRLLQLL 88
+E + IN L+ L
Sbjct: 483 ATEGSRELKRELINEALETL 502
>gi|218675982|ref|YP_002394801.1| ATP-dependent RNA helicase, DEAD box family [Vibrio splendidus
LGP32]
gi|218324250|emb|CAV25533.1| ATP-dependent RNA helicase, DEAD box family [Vibrio splendidus
LGP32]
Length = 447
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 26/44 (59%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV GIDI + + VI FD P+HT YV
Sbjct: 293 MSQFERAVYKILVTTDVASRGIDIPNVSHVINFDMPKHTEEYVH 336
>gi|218131071|ref|ZP_03459875.1| hypothetical protein BACEGG_02675 [Bacteroides eggerthii DSM 20697]
gi|217986775|gb|EEC53108.1| DEAD/DEAH box helicase [Bacteroides eggerthii DSM 20697]
Length = 428
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ M F G NILVATD++ GIDI LVI +D P + YV
Sbjct: 285 EVMYEFKAGRINILVATDIVARGIDIDDIRLVINYDVPHDSEDYVH 330
>gi|403222338|dbj|BAM40470.1| ATP-dependent RNA helicase [Theileria orientalis strain Shintoku]
Length = 470
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
SF G+ N+LV TDV G+DI +LVI FD PQ ++ Y+
Sbjct: 337 SFKTGLKNVLVVTDVGSRGLDIPLVDLVINFDVPQTSKDYIH 378
>gi|380481939|emb|CCF41547.1| RNase3 domain-containing protein [Colletotrichum higginsianum]
Length = 1588
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
V T+ F + N L AT V EEG+DI CNLV++FD + Y+QSK
Sbjct: 562 VLTIHKFRQAEVNCLFATQVAEEGLDIPDCNLVMRFDLYKSVIQYIQSKG 611
>gi|317477042|ref|ZP_07936284.1| DEAD/DEAH box helicase [Bacteroides eggerthii 1_2_48FAA]
gi|316906835|gb|EFV28547.1| DEAD/DEAH box helicase [Bacteroides eggerthii 1_2_48FAA]
Length = 428
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ M F G NILVATD++ GIDI LVI +D P + YV
Sbjct: 285 EVMYEFKAGRINILVATDIVARGIDIDDIRLVINYDVPHDSEDYVH 330
>gi|329962827|ref|ZP_08300712.1| DEAD/DEAH box helicase [Bacteroides fluxus YIT 12057]
gi|328529384|gb|EGF56297.1| DEAD/DEAH box helicase [Bacteroides fluxus YIT 12057]
Length = 428
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ M F G NILVATD++ GIDI LVI +D P + YV
Sbjct: 285 EVMYEFKAGRINILVATDIVARGIDIDDIRLVINYDVPHDSEDYVH 330
>gi|150864621|ref|XP_001383517.2| ATP-dependent rRNA helicase RRP3 [Scheffersomyces stipitis CBS
6054]
gi|149385877|gb|ABN65488.2| ATP-dependent rRNA helicase RRP3 [Scheffersomyces stipitis CBS
6054]
Length = 396
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
F G NIL+ATDV G+DI S ++VI +D P +++YV
Sbjct: 268 FKSGTANILIATDVAARGLDIPSVDVVINYDIPTDSKAYVH 308
>gi|406986526|gb|EKE07099.1| hypothetical protein ACD_18C00189G0005 [uncultured bacterium]
Length = 451
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQIL 64
++ F+RG I+VATD+ GID++ +LVI FD P ++ YV T ++ + +
Sbjct: 305 SLEGFSRGRFRIMVATDIAARGIDVKQISLVINFDLPDNSEDYVHRIGRTGRAGRSGKAI 364
Query: 65 SQYPKSERYLQYNSPKINRLLQLLRRYNP 93
S SE+ I ++ +L+R+ P
Sbjct: 365 SFVTPSEKM------DIRKIEKLIRKTLP 387
>gi|332297922|ref|YP_004439844.1| DEAD/DEAH box helicase domain protein [Treponema brennaborense DSM
12168]
gi|332181025|gb|AEE16713.1| DEAD/DEAH box helicase domain protein [Treponema brennaborense DSM
12168]
Length = 610
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 14/83 (16%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ-----------SK 51
+Q + SF RG LVATDV GID+ +V+ +D P + +YV K
Sbjct: 283 LQVLESFKRGSLKCLVATDVAARGIDVNDLAMVVNYDLPNESENYVHRIGRTARAGKSGK 342
Query: 52 AFTVVRHKAEQILSQYPKSERYL 74
A+T +EQ + P ERYL
Sbjct: 343 AYTFC---SEQDVYNLPAIERYL 362
>gi|158514834|sp|A3LS22.3|RRP3_PICST RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 484
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
F G NIL+ATDV G+DI S ++VI +D P +++YV
Sbjct: 356 FKSGTANILIATDVAARGLDIPSVDVVINYDIPTDSKAYVH 396
>gi|353230587|emb|CCD77004.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 342
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M +F G + IL++TD+L GID+Q +LVI FD P + SY+
Sbjct: 298 MTAFRSGSSRILISTDLLSRGIDVQQISLVINFDLPTNLESYIH 341
>gi|342319919|gb|EGU11864.1| Pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Rhodotorula
glutinis ATCC 204091]
Length = 1534
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFT 54
QT++ F G I++AT V G+D++ LVI++DPP H YV T
Sbjct: 865 QTIVDFKNGSCPIVIATSVAARGLDVKQLKLVIQYDPPNHMEDYVHRAGRT 915
>gi|386845370|ref|YP_006263383.1| DEAD/DEAH box helicase [Actinoplanes sp. SE50/110]
gi|359832874|gb|AEV81315.1| DEAD/DEAH box helicase domain-containing protein [Actinoplanes sp.
SE50/110]
Length = 659
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+T+ F G TN+LVATDV GI + +LV+ DPP+ + Y+ T ++ +
Sbjct: 373 RTLAEFKEGRTNVLVATDVAARGIHVDGVSLVVHVDPPKDPKDYLHRAGRTARAGESGAV 432
Query: 64 LSQ-YPKSERYLQ 75
++ PK R Q
Sbjct: 433 VTLVLPKQRRTTQ 445
>gi|83774779|dbj|BAE64902.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1256
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 34/50 (68%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
++T+ F G+ ++++ TD LEEG+DI +CN V+ F+ + +S++Q +
Sbjct: 350 METLQKFRDGVLDLIITTDALEEGMDIPACNTVLNFNCILNLKSFIQRRG 399
>gi|145478351|ref|XP_001425198.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392267|emb|CAK57800.1| unnamed protein product [Paramecium tetraurelia]
Length = 472
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV 48
M SF RG T +LVATDV G+DI+ VI FD P+ YV
Sbjct: 356 MNSFKRGDTTVLVATDVASRGLDIKDIEFVINFDMPKLIEDYV 398
>gi|34782983|gb|AAH12461.2| DDX51 protein, partial [Homo sapiens]
Length = 186
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F +G +L++TD GID+Q LV+ +D PQ+ R+YV T K Q +
Sbjct: 71 FEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLL 130
Query: 69 KSE--RYL----QYNSPKINR 83
K + R+L + +P++ R
Sbjct: 131 KVQERRFLRMLTEAGAPELQR 151
>gi|442608782|ref|ZP_21023524.1| Cold-shock DEAD-box protein A [Pseudoalteromonas luteoviolacea B =
ATCC 29581]
gi|441749831|emb|CCQ09586.1| Cold-shock DEAD-box protein A [Pseudoalteromonas luteoviolacea B =
ATCC 29581]
Length = 621
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+T+ G+ +I++ATDV G+D++ +LVI +D PQ +YV T ++ +
Sbjct: 284 RTIERLKSGLVDIVIATDVAARGLDVERLSLVINYDIPQDCEAYVHRIGRTGRAGRSGKA 343
Query: 64 LSQYPKSERYLQYN 77
+ SERYL N
Sbjct: 344 ILFVKNSERYLLKN 357
>gi|400596806|gb|EJP64562.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 576
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
T F+ IL+ TDV G+DI + + +++FDPP +TR Y+
Sbjct: 390 TFFEFSNAPCGILICTDVAARGLDIPAVDFIVQFDPPDNTRDYIH 434
>gi|416351783|ref|ZP_11681201.1| ATP-dependent RNA helicase [Clostridium botulinum C str. Stockholm]
gi|338195925|gb|EGO88155.1| ATP-dependent RNA helicase [Clostridium botulinum C str. Stockholm]
Length = 281
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAE 61
++ + F RG LVATDV GIDI+ VI ++ P SYV T HK +
Sbjct: 84 LEVIQEFKRGRFPFLVATDVAARGIDIEEITHVINYEVPSEKESYVHRIGRTGRAGHKGK 143
Query: 62 QI--LSQYP----KS-ERYLQYNSPK 80
I +S+Y KS E Y+ YN PK
Sbjct: 144 SITLVSEYENRRFKSIEEYIGYNVPK 169
>gi|391873779|gb|EIT82787.1| dsRNA-specific nuclease Dicer [Aspergillus oryzae 3.042]
Length = 1089
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 34/50 (68%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
++T+ F G+ ++++ TD LEEG+DI +CN V+ F+ + +S++Q +
Sbjct: 183 METLQKFRDGVLDLIITTDALEEGMDIPACNTVLNFNCILNLKSFIQRRG 232
>gi|350424793|ref|XP_003493914.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Bombus
impatiens]
Length = 566
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G ILVATDV G+D++ VI FD P + YV T R K + +
Sbjct: 400 FRSGKAPILVATDVAARGLDVEDVKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFT 459
Query: 69 KSERYLQYNSPKINRLLQLLRRYN 92
+ NS K N L+Q+L+ N
Sbjct: 460 PN------NSNKANDLIQVLKEAN 477
>gi|452848275|gb|EME50207.1| hypothetical protein DOTSEDRAFT_68922 [Dothistroma septosporum
NZE10]
Length = 936
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFT-VVRHKAEQ 62
Q +L F GI I+VAT V G+D++ LVI +D P H YV T
Sbjct: 583 QAILDFKAGIIPIMVATSVAARGLDVKQLKLVINYDSPNHGEDYVHRAGRTGRAGQTGTA 642
Query: 63 ILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQ 95
+ P+ ER+ +P + R LQ ++ P +
Sbjct: 643 VTLLTPEQERF----APFLVRALQDSKQEVPQE 671
>gi|380011998|ref|XP_003690078.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Apis
florea]
Length = 566
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G ILVATDV G+D++ VI FD P + YV T R K + +
Sbjct: 400 FRSGKAPILVATDVAARGLDVEDVKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFT 459
Query: 69 KSERYLQYNSPKINRLLQLLRRYN 92
+ NS K N L+Q+L+ N
Sbjct: 460 PN------NSNKANDLIQVLKEAN 477
>gi|119581203|gb|EAW60799.1| likely ortholog of mouse D11lgp2, isoform CRA_c [Homo sapiens]
Length = 379
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G N+LVAT V EEG+DI CN+V+++ + S VQ++ R +A+Q + +
Sbjct: 282 FQDGTLNLLVATSVAEEGLDIPHCNVVVRYGLLTNEISMVQARG----RARADQSVYAFV 337
Query: 69 KSERYLQYNSPKINRLLQLL 88
+E + IN L+ L
Sbjct: 338 ATEGSRELKRELINEALETL 357
>gi|242033791|ref|XP_002464290.1| hypothetical protein SORBIDRAFT_01g015670 [Sorghum bicolor]
gi|241918144|gb|EER91288.1| hypothetical protein SORBIDRAFT_01g015670 [Sorghum bicolor]
Length = 1385
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFD 39
V+ + SF G ++++AT +LEEG+D+ SCNL+I+FD
Sbjct: 437 VEIVDSFRSGKVHLIIATQILEEGLDVPSCNLIIRFD 473
>gi|261337257|ref|ZP_05965141.1| ATP-dependent RNA helicase [Bifidobacterium gallicum DSM 20093]
gi|270277617|gb|EFA23471.1| ATP-dependent RNA helicase [Bifidobacterium gallicum DSM 20093]
Length = 662
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+ + +F +G N+LVATDV GID+ +LV++ DPP+ ++++ T + +
Sbjct: 337 RNLAAFEQGNVNVLVATDVAARGIDVSGVDLVVQVDPPEDPKAFLHRSGRTARAGREGDV 396
Query: 64 LS-QYPKSERYLQYNSPKINRLLQLLRRYNPDQR 96
++ P RY++ LL R N D +
Sbjct: 397 ITIMTPDQRRYVK----------SLLHRANIDAK 420
>gi|189465693|ref|ZP_03014478.1| hypothetical protein BACINT_02054 [Bacteroides intestinalis DSM
17393]
gi|189433957|gb|EDV02942.1| DEAD/DEAH box helicase [Bacteroides intestinalis DSM 17393]
Length = 428
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ M F G NILVATD++ GIDI LVI +D P + YV
Sbjct: 285 EVMHEFKAGRVNILVATDIVARGIDIDDIRLVINYDVPHDSEDYVH 330
>gi|160331247|ref|XP_001712331.1| eif4A [Hemiselmis andersenii]
gi|159765778|gb|ABW98006.1| eif4A [Hemiselmis andersenii]
Length = 401
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+TM +F G +L+ TD+L GIDI+ N VI +D PQ+ SY+
Sbjct: 303 ETMKNFRFGKFRVLITTDLLSRGIDIEKVNFVINYDLPQYKESYIH 348
>gi|66555009|ref|XP_395774.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Apis
mellifera]
Length = 566
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G ILVATDV G+D++ VI FD P + YV T R K + +
Sbjct: 400 FRSGKAPILVATDVAARGLDVEDVKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFT 459
Query: 69 KSERYLQYNSPKINRLLQLLRRYN 92
+ NS K N L+Q+L+ N
Sbjct: 460 PN------NSNKANDLIQVLKEAN 477
>gi|307215190|gb|EFN89962.1| Probable ATP-dependent RNA helicase DDX17 [Harpegnathos saltator]
Length = 540
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G ILVATDV G+D++ VI FD P + YV T R K + +
Sbjct: 375 FRSGKAPILVATDVAARGLDVEDVKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFT 434
Query: 69 KSERYLQYNSPKINRLLQLLRRYN 92
+ NS K N L+Q+L+ N
Sbjct: 435 PN------NSNKANDLIQVLKEAN 452
>gi|328872313|gb|EGG20680.1| RNA-directed RNA polymerase [Dictyostelium fasciculatum]
Length = 2876
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G +LVAT+VLEEG+D+ CNLVI F+ RS +Q + R ++E Y
Sbjct: 797 FKLGHCKLLVATNVLEEGLDVSECNLVICFESDFSMRSMIQRRG----RARSENGNFMYL 852
Query: 69 KSERYL 74
+ E+ L
Sbjct: 853 REEKQL 858
>gi|308455471|ref|XP_003090269.1| hypothetical protein CRE_17662 [Caenorhabditis remanei]
gi|308265013|gb|EFP08966.1| hypothetical protein CRE_17662 [Caenorhabditis remanei]
Length = 907
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
V+ + F G +LV+T V EEG+DI CNLVIK++ + ++VQ +
Sbjct: 623 VEKLKQFGSGGIRVLVSTSVAEEGLDISECNLVIKYNYATNVIAHVQRRGRGRANGSRSI 682
Query: 63 ILSQYPKSERYLQYNSPKINRLLQLLRRYNPD 94
+++ P E+ + N K L R N +
Sbjct: 683 LITNDPSLEKQERANKDKEKMSKAALERINEN 714
>gi|388857965|emb|CCF48410.1| related to cell cycle control protein dicer [Ustilago hordei]
Length = 1752
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 3 VQTMLSFNR-GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
VQ + F R TN+L+AT + EEG+DIQ+ NLVI+FD S++QS+
Sbjct: 584 VQVLNRFRRRKPTNLLIATSIAEEGLDIQAANLVIRFDLFNRHISFLQSRG 634
>gi|383863318|ref|XP_003707128.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like
[Megachile rotundata]
Length = 566
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G ILVATDV G+D++ VI FD P + YV T R K + +
Sbjct: 400 FRSGKAPILVATDVAARGLDVEDVKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFT 459
Query: 69 KSERYLQYNSPKINRLLQLLRRYN 92
+ NS K N L+Q+L+ N
Sbjct: 460 PN------NSNKANDLIQVLKEAN 477
>gi|296417821|ref|XP_002838549.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634492|emb|CAZ82740.1| unnamed protein product [Tuber melanosporum]
Length = 1490
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+T+ F G N++V+T V+EEG+DI +C LV+ F P + +S++Q +
Sbjct: 412 ETIEDFRAGKKNLVVSTSVVEEGMDIPACRLVVCFSLPPNLKSFIQRRG 460
>gi|443716343|gb|ELU07919.1| hypothetical protein CAPTEDRAFT_209893 [Capitella teleta]
Length = 483
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQILSQ 66
SF + +LV TDV+ G+DI N V ++DPP + ++V T + H I+
Sbjct: 309 SFRKMKGGVLVCTDVMGRGVDIPEINWVTQYDPPSSSSNFVHRCGRTARIGHTGSAIVYL 368
Query: 67 YPKSERYLQYNSPKINRLLQLLRRYNPD 94
P E Y+ + S IN+ + L+ PD
Sbjct: 369 RPIEETYVSFLS--INQKVPLVEHVPPD 394
>gi|90076976|dbj|BAE88168.1| unnamed protein product [Macaca fascicularis]
Length = 488
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+ + F G N+LVAT V EEG+DI CN+V+++ + S VQ++ R +A+Q
Sbjct: 331 EVIRKFRDGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQARG----RARADQS 386
Query: 64 LSQYPKSERYLQYNSPKINRLLQLL 88
+ + +E + IN L++L
Sbjct: 387 VYSFVATEGSRELKRELINEALEML 411
>gi|153955940|ref|YP_001396705.1| RNA helicase [Clostridium kluyveri DSM 555]
gi|219856282|ref|YP_002473404.1| hypothetical protein CKR_2939 [Clostridium kluyveri NBRC 12016]
gi|146348798|gb|EDK35334.1| Predicted RNA helicase [Clostridium kluyveri DSM 555]
gi|219570006|dbj|BAH07990.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 524
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ T+ F G + LVATDV GID+++ + VI +D PQ T SYV
Sbjct: 283 LNTLRKFKEGSLDFLVATDVAARGIDVENVSHVINYDLPQDTESYVH 329
>gi|403335713|gb|EJY67037.1| DEAD/DEAH box helicase family protein [Oxytricha trifallax]
Length = 972
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQIL 64
T+ F G ++LVATDV G+DI + +LVI+ +PP +Y+ T K +
Sbjct: 446 TLKRFRDGKFSVLVATDVASRGLDIPNVDLVIQVEPPNEVETYIHRSGRTARAGKMGVCI 505
Query: 65 SQYPKSERYL 74
+ Y K +Y+
Sbjct: 506 TFYTKKSQYM 515
>gi|237710076|ref|ZP_04540557.1| ATP-dependent RNA helicase [Bacteroides sp. 9_1_42FAA]
gi|265753725|ref|ZP_06089080.1| ATP-dependent RNA helicase [Bacteroides sp. 3_1_33FAA]
gi|345515323|ref|ZP_08794827.1| ATP-dependent RNA helicase [Bacteroides dorei 5_1_36/D4]
gi|423231344|ref|ZP_17217747.1| hypothetical protein HMPREF1063_03567 [Bacteroides dorei
CL02T00C15]
gi|423245933|ref|ZP_17227006.1| hypothetical protein HMPREF1064_03212 [Bacteroides dorei
CL02T12C06]
gi|229437984|gb|EEO48061.1| ATP-dependent RNA helicase [Bacteroides dorei 5_1_36/D4]
gi|229456169|gb|EEO61890.1| ATP-dependent RNA helicase [Bacteroides sp. 9_1_42FAA]
gi|263235439|gb|EEZ20963.1| ATP-dependent RNA helicase [Bacteroides sp. 3_1_33FAA]
gi|392628230|gb|EIY22263.1| hypothetical protein HMPREF1063_03567 [Bacteroides dorei
CL02T00C15]
gi|392637439|gb|EIY31307.1| hypothetical protein HMPREF1064_03212 [Bacteroides dorei
CL02T12C06]
Length = 423
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 45/103 (43%), Gaps = 16/103 (15%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ-----------SKA 52
Q M F G NIL+ATD++ GIDI LVI +D P + YV A
Sbjct: 285 QIMREFKSGRINILIATDIVSRGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANHDGCA 344
Query: 53 FTVVRHKAEQILSQYPKSERYLQYNSPKINRLLQLLR--RYNP 93
T V K + +Q+ E +L N KI +L YNP
Sbjct: 345 ITFVSEKEQ---TQFKAIENFLGRNIYKIPVPEELGEAPEYNP 384
>gi|395745041|ref|XP_002823989.2| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX55
[Pongo abelii]
Length = 602
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + F + T ILV TDV+ GIDI N V+++DPP + ++V T + H
Sbjct: 309 KIFMEFRKLQTGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 63 ILSQYPKSERYLQY 76
++ P E Y+ +
Sbjct: 369 LVFLLPMEESYINF 382
>gi|366166094|ref|ZP_09465849.1| DEAD/DEAH box helicase domain-containing protein [Acetivibrio
cellulolyticus CD2]
Length = 481
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFT-VVRHKAE 61
++ M F +G LVATDV GIDI +LVI +D PQ SYV T V +
Sbjct: 282 LRVMNDFKQGYFRYLVATDVAARGIDIDDISLVINYDIPQDKESYVHRIGRTGRVDRNGK 341
Query: 62 QILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQRTI 98
I P +YL I + ++L R PD+ +
Sbjct: 342 AITFVTPDESKYLDDIHKYIGKEIELKER--PDKEAV 376
>gi|212693337|ref|ZP_03301465.1| hypothetical protein BACDOR_02849 [Bacteroides dorei DSM 17855]
gi|423238539|ref|ZP_17219655.1| hypothetical protein HMPREF1065_00278 [Bacteroides dorei
CL03T12C01]
gi|212664102|gb|EEB24674.1| DEAD/DEAH box helicase [Bacteroides dorei DSM 17855]
gi|392648222|gb|EIY41912.1| hypothetical protein HMPREF1065_00278 [Bacteroides dorei
CL03T12C01]
Length = 423
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 45/103 (43%), Gaps = 16/103 (15%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ-----------SKA 52
Q M F G NIL+ATD++ GIDI LVI +D P + YV A
Sbjct: 285 QIMREFKSGRINILIATDIVSRGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANHDGCA 344
Query: 53 FTVVRHKAEQILSQYPKSERYLQYNSPKINRLLQLLR--RYNP 93
T V K + +Q+ E +L N KI +L YNP
Sbjct: 345 ITFVSEKEQ---TQFKAIENFLGRNIYKIPVPEELGEAPEYNP 384
>gi|163800192|ref|ZP_02194093.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrio sp.
AND4]
gi|159175635|gb|EDP60429.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrio sp.
AND4]
Length = 443
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV GIDI + VI FD P+HT YV
Sbjct: 289 MSQFERAVFKILVTTDVASRGIDIATVTHVINFDMPKHTEEYVH 332
>gi|119618949|gb|EAW98543.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Homo sapiens]
Length = 291
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F +G +L++TD GID+Q LV+ +D PQ+ R+YV T K Q +
Sbjct: 176 FEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLL 235
Query: 69 KSE--RYL----QYNSPKINR 83
K + R+L + +P++ R
Sbjct: 236 KVQERRFLRMLTEAGAPELQR 256
>gi|332662165|ref|YP_004444953.1| DEAD/DEAH box helicase [Haliscomenobacter hydrossis DSM 1100]
gi|332330979|gb|AEE48080.1| DEAD/DEAH box helicase domain protein [Haliscomenobacter hydrossis
DSM 1100]
Length = 451
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+TML+F +I+VATDV+ GID+ +LV+ +D P+ YV T K E
Sbjct: 284 ETMLAFRNSKIDIIVATDVISRGIDVDGIDLVVNYDVPRDPEDYVHRVGRTARAERKGEA 343
Query: 63 I 63
I
Sbjct: 344 I 344
>gi|153217004|ref|ZP_01950768.1| ATP-dependent rna helicase, dead box family [Vibrio cholerae
1587]
gi|124113958|gb|EAY32778.1| ATP-dependent rna helicase, dead box family [Vibrio cholerae
1587]
Length = 188
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI + VI FD P+HT YV
Sbjct: 29 MGQFERAVFKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVH 72
>gi|118389642|ref|XP_001027904.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|89309674|gb|EAS07662.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 642
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV--VRHKA 60
+ T F+ + +L+ TDV G+DI + + ++++DPP T+ Y+ T
Sbjct: 436 LNTFYEFSNATSGVLLCTDVAARGLDIPNVDWIVQYDPPDDTKEYIHRVGRTCRGANTTG 495
Query: 61 EQILSQYPKSERYLQY-NSPKIN 82
+ +L P+ + YL+Y + K+N
Sbjct: 496 KALLFLLPEEKDYLKYLKAAKVN 518
>gi|294673582|ref|YP_003574198.1| DEAD/DEAH box helicase [Prevotella ruminicola 23]
gi|294472821|gb|ADE82210.1| ATP-dependent helicase, DEAD/DEAH box family [Prevotella ruminicola
23]
Length = 446
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ M F G T++LVATD++ GIDI LVI +D P + YV
Sbjct: 286 EAMYRFKAGQTDVLVATDIVARGIDIDDIRLVINYDVPSDSEDYVH 331
>gi|443922420|gb|ELU41871.1| ATP dependent RNA helicase (Dhh1), putative [Rhizoctonia solani
AG-1 IA]
Length = 432
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
F G+ LV +D+L GIDIQ+ N+VI FD P+H+ +Y+
Sbjct: 324 FRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKHSETYLH 364
>gi|328871046|gb|EGG19418.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 880
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQI 63
T F + IL+ TDV G+D+ N +I++DP T+ YV T + H I
Sbjct: 593 TFFKFQKAKKGILLTTDVAARGLDLPQVNWIIQYDPCSDTKDYVHRIGRTARIGHTGSAI 652
Query: 64 LSQYPKSERYLQY 76
+ P ++Y+Q+
Sbjct: 653 IFLLPTEKKYVQH 665
>gi|150005667|ref|YP_001300411.1| ATP-dependent RNA helicase [Bacteroides vulgatus ATCC 8482]
gi|423315247|ref|ZP_17293178.1| hypothetical protein HMPREF1058_03790 [Bacteroides vulgatus
CL09T03C04]
gi|149934091|gb|ABR40789.1| ATP-dependent RNA helicase [Bacteroides vulgatus ATCC 8482]
gi|392680264|gb|EIY73637.1| hypothetical protein HMPREF1058_03790 [Bacteroides vulgatus
CL09T03C04]
Length = 425
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 45/103 (43%), Gaps = 16/103 (15%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ-----------SKA 52
Q M F G NIL+ATD++ GIDI LVI +D P + YV A
Sbjct: 285 QIMREFKSGRINILIATDIVSRGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANHDGCA 344
Query: 53 FTVVRHKAEQILSQYPKSERYLQYNSPKINRLLQLLR--RYNP 93
T V K + +Q+ E +L N KI +L YNP
Sbjct: 345 ITFVSEKEQ---TQFKAIENFLGRNIYKIPVPEELGEAPEYNP 384
>gi|452989114|gb|EME88869.1| hypothetical protein MYCFIDRAFT_114276, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 1111
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFT-VVRHKAEQ 62
Q +L F G I+VAT V G+D++ LVI FD P H YV T +
Sbjct: 765 QAILDFKSGAIPIMVATSVAARGLDVKQLKLVINFDSPNHGEDYVHRAGRTGRAGNTGTA 824
Query: 63 ILSQYPKSERYLQYNSPKINRLLQLLRRYNPD 94
+ P+ +RY +P + R L+ ++ PD
Sbjct: 825 VTFVTPEQDRY----APFLVRCLEDSKQEPPD 852
>gi|426197762|gb|EKV47689.1| hypothetical protein AGABI2DRAFT_185614 [Agaricus bisporus var.
bisporus H97]
Length = 433
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 4 QTMLSFNR---GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKA 60
Q + +FNR G +NILVATD+ G+D+ + ++VI +D P ++ YV T +A
Sbjct: 276 QRLGAFNRFKSGKSNILVATDLASRGLDVANVDVVINYDTPTSSKDYVHRVGRTARAGRA 335
Query: 61 EQ---ILSQY 67
+ ++SQY
Sbjct: 336 GKSILMVSQY 345
>gi|440290189|gb|ELP83629.1| eukaryotic initiation factor 4A-10, putative [Entamoeba invadens
IP1]
Length = 391
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ + F +G T IL+ TD+L GID+Q +LVI FD P SY+
Sbjct: 298 KVLTEFRQGTTRILITTDMLSRGIDVQQVSLVINFDMPVSDESYIH 343
>gi|319640865|ref|ZP_07995576.1| ATP-dependent RNA helicase [Bacteroides sp. 3_1_40A]
gi|345519525|ref|ZP_08798945.1| ATP-dependent RNA helicase [Bacteroides sp. 4_3_47FAA]
gi|254836893|gb|EET17202.1| ATP-dependent RNA helicase [Bacteroides sp. 4_3_47FAA]
gi|317387502|gb|EFV68370.1| ATP-dependent RNA helicase [Bacteroides sp. 3_1_40A]
Length = 425
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 45/103 (43%), Gaps = 16/103 (15%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ-----------SKA 52
Q M F G NIL+ATD++ GIDI LVI +D P + YV A
Sbjct: 285 QIMREFKSGRINILIATDIVSRGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANHDGCA 344
Query: 53 FTVVRHKAEQILSQYPKSERYLQYNSPKINRLLQLLR--RYNP 93
T V K + +Q+ E +L N KI +L YNP
Sbjct: 345 ITFVSEKEQ---TQFKAIENFLGRNIYKIPVPEELGEAPEYNP 384
>gi|146182736|ref|XP_001025134.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|146143751|gb|EAS04889.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 476
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 26/41 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
F G +LVATD++ GIDI+ NLVI FD PQ T Y+
Sbjct: 327 FKEGKNRVLVATDLVGRGIDIERVNLVINFDMPQITEDYMH 367
>gi|440909766|gb|ELR59643.1| ATP-dependent RNA helicase DDX51, partial [Bos grunniens mutus]
Length = 542
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
F +G +L++TD + GID+Q LV+ +D PQ+ R+YV T K+ Q +
Sbjct: 427 FEQGKIQLLISTDAMARGIDVQGVQLVVNYDAPQYLRTYVHRVGRTARAGKSGQAFT 483
>gi|367022572|ref|XP_003660571.1| hypothetical protein MYCTH_2299034 [Myceliophthora thermophila ATCC
42464]
gi|347007838|gb|AEO55326.1| hypothetical protein MYCTH_2299034 [Myceliophthora thermophila ATCC
42464]
Length = 1604
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
V+T+ F +G N + AT V EEG+DI CN +I+FD Y+QS+
Sbjct: 532 VRTIYKFKKGELNCIFATSVAEEGLDIPDCNAIIRFDLNDTLIQYIQSRG 581
>gi|281201329|gb|EFA75541.1| hypothetical protein PPL_11046 [Polysphondylium pallidum PN500]
Length = 1128
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N++VAT VLEEG+D+ CN+VI+ D P ++ Q +
Sbjct: 574 FRSGQYNVIVATAVLEEGLDVPKCNVVIRIDSPATVTAFTQCRG 617
>gi|385302137|gb|EIF46285.1| dead-box atp-dependent rna helicase 42 [Dekkera bruxellensis
AWRI1499]
Length = 403
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 11/77 (14%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV-----------QSKA 52
+ + F G+ +ILVAT V G+DI N+VI F P H Y+ + K+
Sbjct: 127 EIITDFRNGVIDILVATSVASRGLDIDXLNMVINFYAPSHMEDYIHRVGRTGRAGRKGKS 186
Query: 53 FTVVRHKAEQILSQYPK 69
+T++ H E+ S K
Sbjct: 187 YTMITHTEEKAASDIVK 203
>gi|67423403|dbj|BAD99522.1| VASA RNA helicase [Daphnia magna]
Length = 775
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
Q + F G+ NILVAT+V G+DI N V+ +D P YV T +
Sbjct: 635 QALRDFKNGVRNILVATNVAARGLDIAGVNYVVNYDLPTDIEEYVHRVGRTGRVGNIGKS 694
Query: 64 LSQYPKSERYLQYNSPKINRLLQLLRRYNPD 94
+S + + + + P + + + LL + N D
Sbjct: 695 ISFFDEEK-----DGPNVGKFVSLLTKSNAD 720
>gi|378727578|gb|EHY54037.1| RNA helicase/RNAse III [Exophiala dermatitidis NIH/UT8656]
Length = 1629
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N++ AT V EEGIDI CNLV++FD + Y+QS+
Sbjct: 496 FRVGTINLIFATSVAEEGIDIPQCNLVVRFDLYKTPIQYMQSRG 539
>gi|348680026|gb|EGZ19842.1| hypothetical protein PHYSODRAFT_558487 [Phytophthora sojae]
Length = 2706
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHK 59
T+ F +G +LVAT+VLEEG+D+ C+LVI+FD S +QS+ RH+
Sbjct: 664 TLDRFRQGRIRLLVATNVLEEGLDVPECSLVIQFDGVVGVTSLIQSRG--RARHR 716
>gi|294776591|ref|ZP_06742061.1| DEAD/DEAH box helicase [Bacteroides vulgatus PC510]
gi|294449579|gb|EFG18109.1| DEAD/DEAH box helicase [Bacteroides vulgatus PC510]
Length = 425
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
Q M F G NIL+ATD++ GIDI LVI +D P + YV
Sbjct: 285 QIMREFKSGRINILIATDIVSRGIDIDDIRLVINYDVPHDSEDYVH 330
>gi|409080848|gb|EKM81208.1| hypothetical protein AGABI1DRAFT_119719 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 398
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 4 QTMLSFNR---GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKA 60
Q + +FNR G +NILVATD+ G+D+ + ++VI +D P ++ YV T +A
Sbjct: 272 QRLGAFNRFKSGKSNILVATDLASRGLDVANVDVVINYDTPTSSKDYVHRVGRTARAGRA 331
Query: 61 EQ---ILSQY 67
+ ++SQY
Sbjct: 332 GKSILMVSQY 341
>gi|88603077|ref|YP_503255.1| DEAD/DEAH box helicase-like protein [Methanospirillum hungatei
JF-1]
gi|88188539|gb|ABD41536.1| DEAD/DEAH box helicase-like protein [Methanospirillum hungatei
JF-1]
Length = 531
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+ M +F +G IL+ATDV GID++ +LV FD PQ YV T + +
Sbjct: 284 KVMNAFRKGQLEILIATDVAARGIDVEEIDLVCNFDFPQDDEYYVHRIGRTARAGRTGRA 343
Query: 64 LSQYPKSERY 73
+S ERY
Sbjct: 344 ISFVSPRERY 353
>gi|339444298|ref|YP_004710302.1| hypothetical protein EGYY_07040 [Eggerthella sp. YY7918]
gi|338904050|dbj|BAK43901.1| hypothetical protein EGYY_07040 [Eggerthella sp. YY7918]
Length = 510
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 26/42 (61%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+F RG T+ILVATDVL GID+ N VI FD P YV
Sbjct: 288 NFRRGKTSILVATDVLARGIDVPDVNHVINFDLPDMPEDYVH 329
>gi|328873249|gb|EGG21616.1| DEAD/DEAH box helicase domain-containing protein [Dictyostelium
fasciculatum]
Length = 397
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
SF GIT +L+ TD+L GID+Q +LVI +D P + +Y+
Sbjct: 308 SFRSGITRVLITTDLLARGIDVQQVSLVINYDIPGNLENYIH 349
>gi|328716579|ref|XP_001944314.2| PREDICTED: endoribonuclease Dcr-1-like isoform 1 [Acyrthosiphon
pisum]
Length = 1609
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+T+ F + N+L+ T VLE GID+ CNLVI ++ P +SY++SK+
Sbjct: 250 ETLRRFRQRECNVLIGTKVLEAGIDLPRCNLVINYNIPLSYKSYLRSKS 298
>gi|324506964|gb|ADY42960.1| ATP-dependent RNA helicase DDX58 [Ascaris suum]
Length = 400
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAE 61
+ ++ F G +L AT V EEGIDIQ C LVIK++ + ++VQ + R +AE
Sbjct: 131 EKLMQFANGDVKVLCATSVAEEGIDIQKCTLVIKYNYATNEIAHVQRRG----RGRAE 184
>gi|194747363|ref|XP_001956121.1| GF24750 [Drosophila ananassae]
gi|190623403|gb|EDV38927.1| GF24750 [Drosophila ananassae]
Length = 613
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 1 MDVQTMLS-FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRH 58
MD ++L+ F G NILVATDV G+D+ VI FD PQ + YV T +H
Sbjct: 402 MDRDSVLNDFRNGRHNILVATDVAARGLDVDGIKYVINFDFPQSSEDYVHRIGRTGRKH 460
>gi|328716581|ref|XP_003245985.1| PREDICTED: endoribonuclease Dcr-1-like isoform 2 [Acyrthosiphon
pisum]
Length = 1489
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+T+ F + N+L+ T VLE GID+ CNLVI ++ P +SY++SK+
Sbjct: 250 ETLRRFRQRECNVLIGTKVLEAGIDLPRCNLVINYNIPLSYKSYLRSKS 298
>gi|242763899|ref|XP_002340666.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC
10500]
gi|218723862|gb|EED23279.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC
10500]
Length = 1494
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ + F +G N + AT V EEG+DI CNLV++FD Y+QS+
Sbjct: 478 KATIEFRKGELNCIFATSVAEEGLDIPDCNLVVRFDLYDTLIQYIQSRG 526
>gi|403292244|ref|XP_003937163.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Saimiri boliviensis
boliviensis]
Length = 600
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + F + + ILV TDV+ GIDI N V+++DPP ++V T + H+
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTARIGHRGSA 368
Query: 63 ILSQYPKSERYLQY 76
++ P E Y+ +
Sbjct: 369 LVFLLPMEESYINF 382
>gi|225561826|gb|EEH10106.1| dicer-like protein [Ajellomyces capsulatus G186AR]
Length = 1502
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 5 TMLSFNRGITNIL--VATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+L F +G N L AT V EEG+DI CNL+I+FD Y+QS+
Sbjct: 489 TLLKFRKGELNCLEQFATSVAEEGLDIPDCNLIIRFDLSLTMIQYIQSRG 538
>gi|423225777|ref|ZP_17212244.1| hypothetical protein HMPREF1062_04430 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392631362|gb|EIY25335.1| hypothetical protein HMPREF1062_04430 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 422
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ M F G NILVATD++ GIDI LVI +D P + YV
Sbjct: 285 EVMHEFKAGRINILVATDIVARGIDIDDIRLVINYDVPHDSEDYVH 330
>gi|424513552|emb|CCO66174.1| predicted protein [Bathycoccus prasinos]
Length = 487
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHK---AEQILS 65
F G NILVATDV G+DI S ++VI FD P +++ YV T + A +++
Sbjct: 322 FKGGERNILVATDVASRGLDIPSVDVVINFDVPMNSKDYVHRVGRTARAGRSGLAITLVT 381
Query: 66 Q-----YPKSERYLQYNSPKI----NRLLQLLRRYNPDQR 96
Q Y K ER ++ K + L +L R N QR
Sbjct: 382 QYDVELYQKIERLIEKRLEKYPVEEEQCLVMLERVNEAQR 421
>gi|73994975|ref|XP_543351.2| PREDICTED: ATP-dependent RNA helicase DDX51 [Canis lupus
familiaris]
Length = 631
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F +G +L++TD + GID+Q LVI +D PQ+ R+YV T + Q +
Sbjct: 516 FEQGKIQLLISTDAMARGIDVQGVQLVINYDAPQYLRTYVHRVGRTARAGRTGQAFTLLL 575
Query: 69 KSE--RYLQ 75
K + R+LQ
Sbjct: 576 KVQERRFLQ 584
>gi|226487070|emb|CAX75400.1| putative ATP-dependent RNA helicase DDX5 [Schistosoma japonicum]
gi|226487074|emb|CAX75402.1| putative ATP-dependent RNA helicase DDX5 [Schistosoma japonicum]
gi|226487078|emb|CAX75404.1| putative ATP-dependent RNA helicase DDX5 [Schistosoma japonicum]
Length = 768
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
T+ SF G NIL+ATDV G+DI + V+ FD P T Y+
Sbjct: 375 TLASFKSGRMNILIATDVASRGLDIDNIEYVVNFDFPNQTEDYIH 419
>gi|358392732|gb|EHK42136.1| hypothetical protein TRIATDRAFT_251604 [Trichoderma atroviride IMI
206040]
Length = 468
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
T F+ IL+ TDV G+DI + + +++FDPP +TR Y+
Sbjct: 279 TFFEFSNAPHGILICTDVAARGLDIPAVDFIVQFDPPDNTRDYIH 323
>gi|67484120|ref|XP_657280.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|167395584|ref|XP_001741647.1| ATP-dependent RNA helicase eIF4A [Entamoeba dispar SAW760]
gi|56474536|gb|EAL51901.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|165893771|gb|EDR21906.1| ATP-dependent RNA helicase eIF4A, putative [Entamoeba dispar
SAW760]
gi|407041400|gb|EKE40712.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
gi|449705837|gb|EMD45802.1| ATP-dependent RNA helicase eIF4A, putative [Entamoeba histolytica
KU27]
Length = 391
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV 48
F +G T IL+ TD+L GID+Q +LVI FD P SY+
Sbjct: 303 FRQGATRILITTDMLSRGIDVQQVSLVINFDMPVSDESYI 342
>gi|311270521|ref|XP_003132907.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Sus scrofa]
Length = 298
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
F +G +L++TD GID+Q LV+ +D PQ+ R+YV T K+ Q +
Sbjct: 183 FEQGKIQLLISTDATARGIDVQGVQLVLNYDAPQYLRTYVHRVGRTARAGKSGQAFT 239
>gi|224539911|ref|ZP_03680450.1| hypothetical protein BACCELL_04822 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518465|gb|EEF87570.1| hypothetical protein BACCELL_04822 [Bacteroides cellulosilyticus
DSM 14838]
Length = 435
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ M F G NILVATD++ GIDI LVI +D P + YV
Sbjct: 285 EVMHEFKAGRINILVATDIVARGIDIDDIRLVINYDVPHDSEDYVH 330
>gi|390933807|ref|YP_006391312.1| DEAD/DEAH box helicase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569308|gb|AFK85713.1| DEAD/DEAH box helicase domain protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 513
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ T+ F GI + LVATDV GIDI++ VI ++ PQ SYV
Sbjct: 280 INTLRKFKEGILDFLVATDVAARGIDIENVTHVINYNLPQDVESYVH 326
>gi|322704697|gb|EFY96289.1| Dicer-like protein 1 [Metarhizium anisopliae ARSEF 23]
Length = 1476
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
++++ F G N + AT V EEGIDI C+L+I+FD Y+QSK
Sbjct: 522 IESLNRFRYGEINCIFATQVAEEGIDIPECDLIIRFDLYDSAIQYIQSKG 571
>gi|391341486|ref|XP_003745061.1| PREDICTED: endoribonuclease Dicer [Metaseiulus occidentalis]
Length = 1863
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ---ILSQYPKSE 71
N+L+ T E+ +++ CNLV++FDPP+ +SY+ KA K + +LSQY ++
Sbjct: 479 NLLITTTATEDTLELPHCNLVVRFDPPESYKSYIVCKAKAKASSKCARFFIMLSQYETAK 538
>gi|387771827|ref|ZP_10127984.1| cold-shock DEAD-box protein A [Haemophilus parahaemolyticus HK385]
gi|386908212|gb|EIJ72910.1| cold-shock DEAD-box protein A [Haemophilus parahaemolyticus HK385]
Length = 599
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
QT+ G +ILVATDV GIDI+ +LV+ +D P SYV T
Sbjct: 286 QTLDKLKSGRLDILVATDVAARGIDIERISLVVNYDIPLDAESYVHRIGRT--------- 336
Query: 64 LSQYPKSERYLQYNSPKINRLLQ 86
+ +S R L + P+ RLL+
Sbjct: 337 -GRAGRSGRALLFVEPRERRLLR 358
>gi|322698059|gb|EFY89832.1| ATP-dependent RNA helicase HAS1 [Metarhizium acridum CQMa 102]
Length = 581
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
T F+ IL+ TDV G+DI + + +++FDPP +TR Y+
Sbjct: 394 TFFEFSNAEHGILICTDVAARGLDIPAVDFIVQFDPPDNTRDYIH 438
>gi|86137575|ref|ZP_01056152.1| ATP-dependent RNA helicase RhlE [Roseobacter sp. MED193]
gi|85825910|gb|EAQ46108.1| ATP-dependent RNA helicase RhlE [Roseobacter sp. MED193]
Length = 527
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 17/105 (16%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV-----------QSKA 52
+T+ F G ILVA+DV G+D+ S + V FD P H YV + KA
Sbjct: 293 KTLDGFREGKLRILVASDVAARGLDVPSVSHVFNFDVPGHPEDYVHRIGRTGRAGREGKA 352
Query: 53 FTVVRHKAEQILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQRT 97
T+ + E+ L+ E LQ +INRL +++ P +R+
Sbjct: 353 ITICSGRDEKALAAV---ESLLQ---KEINRLENPVKKAEPAKRS 391
>gi|400292254|ref|ZP_10794212.1| helicase C-terminal domain protein [Actinomyces naeslundii str.
Howell 279]
gi|399902624|gb|EJN85421.1| helicase C-terminal domain protein [Actinomyces naeslundii str.
Howell 279]
Length = 279
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+ M +F+ G +++VATD+ GID+ LV+ DPP ++Y+ T A +
Sbjct: 76 RAMRAFSTGQVHVMVATDIAARGIDVSGVELVVHVDPPAEHKAYLHRSGRTARAGAAGSV 135
Query: 64 LS 65
++
Sbjct: 136 VT 137
>gi|333895980|ref|YP_004469854.1| DEAD/DEAH box helicase domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333111245|gb|AEF16182.1| DEAD/DEAH box helicase domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 513
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ T+ F GI + LVATDV GIDI++ VI ++ PQ SYV
Sbjct: 280 INTLRKFKEGILDFLVATDVAARGIDIENVTHVINYNLPQDVESYVH 326
>gi|195335297|ref|XP_002034311.1| GM19969 [Drosophila sechellia]
gi|194126281|gb|EDW48324.1| GM19969 [Drosophila sechellia]
Length = 1731
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN VI D + YVQ+K
Sbjct: 462 FREGNANLMICSSVLEEGIDVQACNHVIILDHLKTFNMYVQTKG 505
>gi|60416850|emb|CAI59782.1| hypothetical protein [Homo sapiens]
Length = 268
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVR 57
F +G +L++TD GID+Q LV+ +D PQ+ R+YV + R
Sbjct: 152 FEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTYVHRRVGRTAR 200
>gi|402494168|ref|ZP_10840913.1| DEAD/DEAH box helicase [Aquimarina agarilytica ZC1]
Length = 452
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQILSQY 67
F G IL+ATDV+ GIDI S + VI D P + +Y+ T K IL
Sbjct: 289 FEEGDNRILIATDVMARGIDIDSVSQVISLDTPDYPENYIHRIGRTGRAEKKGNAILMST 348
Query: 68 PKSERYLQYNSPKINRLLQL 87
P YL+ KI L+++
Sbjct: 349 PNELGYLE----KIEHLMKI 364
>gi|415886177|ref|ZP_11548000.1| DEAD/DEAH box helicase domain protein [Bacillus methanolicus MGA3]
gi|387588830|gb|EIJ81151.1| DEAD/DEAH box helicase domain protein [Bacillus methanolicus MGA3]
Length = 485
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS-QY 67
F G+ ++LVATDV G+DI V FD PQ SYV T K ++
Sbjct: 286 FKEGLIDVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGMAMTFVT 345
Query: 68 PKSERYLQYNSPKINRLLQLLRRYNPDQRTIIFCQRRATIPR 109
P+ + YL+ I R + ++ D+ + Q++ATI +
Sbjct: 346 PREKAYLKIVEKTIKRRMDKMKPPTLDE--ALEGQQKATIDK 385
>gi|336310002|ref|ZP_08564975.1| ATP-dependent RNA helicase SrmB [Shewanella sp. HN-41]
gi|335866562|gb|EGM71540.1| ATP-dependent RNA helicase SrmB [Shewanella sp. HN-41]
Length = 420
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV-----------QSKA 52
Q + F +G N+L+ATDV GIDI + VI FD P+ +Y+ + A
Sbjct: 286 QALSRFTKGEVNVLLATDVAARGIDIDDISHVINFDMPRSADTYIHRIGRTGRAGAKGTA 345
Query: 53 FTVVRHKAEQILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQRT 97
++ +I+ K ERY++ P R+++ LR N + RT
Sbjct: 346 ISLAEAHDMRIVG---KIERYIEL--PLKRRVIEELRPKNKEART 385
>gi|297484677|ref|XP_002694482.1| PREDICTED: ATP-dependent RNA helicase DDX51, partial [Bos taurus]
gi|296478689|tpg|DAA20804.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Bos taurus]
Length = 555
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
F +G +L++TD + GID+Q LV+ +D PQ+ R+YV T K+ Q +
Sbjct: 440 FEQGKIQLLISTDAMARGIDVQGVQLVVNYDAPQYLRTYVHRVGRTARAGKSGQAFT 496
>gi|145352866|ref|XP_001420755.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580990|gb|ABO99048.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 466
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ + F G NIL+ATDV G+DI S ++VI +D PQ+++ YV
Sbjct: 297 IAALQKFKSGERNILIATDVASRGLDIPSVDVVINYDVPQNSKDYVH 343
>gi|66814184|ref|XP_641271.1| hypothetical protein DDB_G0280147 [Dictyostelium discoideum AX4]
gi|74897202|sp|Q54VT4.1|DDX47_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx47; AltName:
Full=DEAD box protein 47
gi|60469306|gb|EAL67300.1| hypothetical protein DDB_G0280147 [Dictyostelium discoideum AX4]
Length = 546
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
F +G +ILVATDV G+DI S +LVI +D P +++ YV
Sbjct: 404 FKQGTKSILVATDVAARGLDIPSVDLVINYDVPTNSKEYVH 444
>gi|346318518|gb|EGX88121.1| RNase3 domain protein [Cordyceps militaris CM01]
Length = 1455
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQS-----KAFTVVR 57
+ + +F G TN L AT V EEG+DI +C+LVI+FD Y+QS KA +V
Sbjct: 460 IMKLNNFKFGDTNCLFATSVAEEGLDIPACDLVIRFDMCVSAIQYIQSRGRARKASSVFI 519
Query: 58 HKAEQILSQYPKSERYLQYNSPKINRLLQLL 88
EQ +Q+ + + ++ + R Q L
Sbjct: 520 TMMEQDNNQHMSRFQNVNIDALSLRRFCQSL 550
>gi|322712774|gb|EFZ04347.1| ATP-dependent RNA helicase HAS1 [Metarhizium anisopliae ARSEF 23]
Length = 581
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
T F+ IL+ TDV G+DI + + +++FDPP +TR Y+
Sbjct: 394 TFFEFSNAEHGILICTDVAARGLDIPAVDFIVQFDPPDNTRDYIH 438
>gi|145596599|ref|YP_001160896.1| DEAD/DEAH box helicase [Salinispora tropica CNB-440]
gi|145305936|gb|ABP56518.1| DEAD/DEAH box helicase domain protein [Salinispora tropica CNB-440]
Length = 461
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFT 54
M +T+ F G TN+LVATDV GI + +LV+ DPP+ + Y+ T
Sbjct: 287 MRTRTLAEFREGRTNVLVATDVAARGIHVDGVSLVLHVDPPKDPKDYLHRAGRT 340
>gi|194375087|dbj|BAG62656.1| unnamed protein product [Homo sapiens]
Length = 411
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + F + + ILV TDV+ GIDI N V+++DPP + ++V T + H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 63 ILSQYPKSERYLQY 76
++ P E Y+ +
Sbjct: 369 LVFLLPMEESYINF 382
>gi|301106324|ref|XP_002902245.1| RNA-dependent RNA Polymerase1 (RDR1) [Phytophthora infestans T30-4]
gi|262098865|gb|EEY56917.1| RNA-dependent RNA Polymerase1 (RDR1) [Phytophthora infestans T30-4]
Length = 2680
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHK 59
T+ F +G +LVAT+VLEEG+D+ C+LVI+FD S +QS+ RH+
Sbjct: 641 TLDRFRQGRIRLLVATNVLEEGLDVPECSLVIQFDGVIGVTSLIQSRG--RARHR 693
>gi|226487072|emb|CAX75401.1| putative ATP-dependent RNA helicase DDX5 [Schistosoma japonicum]
Length = 647
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
T+ SF G NIL+ATDV G+DI + V+ FD P T Y+
Sbjct: 254 TLASFKSGRMNILIATDVASRGLDIDNIEYVVNFDFPNQTEDYIH 298
>gi|389744407|gb|EIM85590.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 910
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
Q M F RG+TN+LV TDV GIDI V+ +D PQ R +V
Sbjct: 372 QQMDFFRRGVTNVLVVTDVAARGIDIPVLENVVNYDFPQGARVFVH 417
>gi|145496370|ref|XP_001434176.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401299|emb|CAK66779.1| unnamed protein product [Paramecium tetraurelia]
Length = 472
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV 48
M SF +G T +LVATDV G+DI+ VI FD P+ YV
Sbjct: 356 MNSFKKGDTTVLVATDVASRGLDIKDIEFVINFDMPKMIEDYV 398
>gi|449281559|gb|EMC88606.1| ATP-dependent RNA helicase DDX51, partial [Columba livia]
Length = 489
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
TM F +G +L++TD GIDI+ N VI +D PQ R+Y+
Sbjct: 378 TMKEFEQGKIQLLISTDATARGIDIKGVNYVINYDAPQFIRTYIH 422
>gi|319902155|ref|YP_004161883.1| DEAD/DEAH box helicase domain protein [Bacteroides helcogenes P
36-108]
gi|319417186|gb|ADV44297.1| DEAD/DEAH box helicase domain protein [Bacteroides helcogenes P
36-108]
Length = 415
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 25/45 (55%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F G NILVATD++ GIDI LVI +D P + YV
Sbjct: 286 VMYEFKAGRINILVATDIVARGIDIDDIRLVINYDVPHDSEDYVH 330
>gi|116196272|ref|XP_001223948.1| hypothetical protein CHGG_04734 [Chaetomium globosum CBS 148.51]
gi|88180647|gb|EAQ88115.1| hypothetical protein CHGG_04734 [Chaetomium globosum CBS 148.51]
Length = 1476
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
V T++ F +G N + AT V EEG+DI CN++I++D Y+QS+
Sbjct: 495 VLTIIKFKKGELNCIFATSVAEEGLDIPDCNVIIRYDLNNTLIQYIQSRG 544
>gi|440639047|gb|ELR08966.1| hypothetical protein GMDG_00584 [Geomyces destructans 20631-21]
Length = 527
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV------------QSKAF 53
SF +L+ TDV G+DI + + +I+FD P R+Y+ + K+F
Sbjct: 348 FFSFVNATEGVLICTDVAARGLDIPAVDWIIQFDAPDEPRNYIHRVGRTARGTNGKGKSF 407
Query: 54 TVVRHKAEQILSQYPKSER--YLQYNSPKI 81
V+ H +E QY + R ++YN PK+
Sbjct: 408 LVL-HPSEVGFIQYLTTARVPLVEYNLPKL 436
>gi|195125432|ref|XP_002007182.1| GI12524 [Drosophila mojavensis]
gi|193918791|gb|EDW17658.1| GI12524 [Drosophila mojavensis]
Length = 602
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 1 MDVQTMLS-FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRH 58
MD +L+ F G NILVATDV G+D+ VI FD PQ + Y+ T +H
Sbjct: 395 MDRDNVLNDFRSGRANILVATDVAARGLDVDGIKYVINFDFPQSSEDYIHRIGRTGRKH 453
>gi|157374733|ref|YP_001473333.1| DEAD/DEAH box helicase [Shewanella sediminis HAW-EB3]
gi|157317107|gb|ABV36205.1| DEAD/DEAH box helicase domain protein [Shewanella sediminis
HAW-EB3]
Length = 465
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
Q M F+RG+ +ILV TDV G+D+ + +LVI FD P+ YV
Sbjct: 306 QIMDQFSRGLQDILVTTDVASRGLDLLNVSLVINFDMPKFAEEYVH 351
>gi|158706455|sp|Q2H0G2.2|DCL1_CHAGB RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL1; Includes: RecName:
Full=ATP-dependent helicase DCL1
Length = 1607
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
V T++ F +G N + AT V EEG+DI CN++I++D Y+QS+
Sbjct: 535 VLTIIKFKKGELNCIFATSVAEEGLDIPDCNVIIRYDLNNTLIQYIQSRG 584
>gi|341890882|gb|EGT46817.1| hypothetical protein CAEBREN_28255 [Caenorhabditis brenneri]
Length = 1015
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFD 39
FN G ++VAT V+EEG+D+ SCNL+IK++
Sbjct: 687 FNNGKMKVIVATSVVEEGLDVTSCNLIIKYN 717
>gi|300707737|ref|XP_002996065.1| hypothetical protein NCER_100895 [Nosema ceranae BRL01]
gi|239605329|gb|EEQ82394.1| hypothetical protein NCER_100895 [Nosema ceranae BRL01]
Length = 528
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G NIL+ATDV G+DI++ LVI +D P + YV T E + +
Sbjct: 417 FRSGYKNILIATDVAARGLDIKNVALVINYDFPNNIEDYVHRIGRTARGDVTEGLSHSFF 476
Query: 69 KSERYLQYNSPKINRLLQLLRRYNPD 94
SE NS L+++L+ N D
Sbjct: 477 TSE-----NSACAKELVKILKEANQD 497
>gi|167385157|ref|XP_001737228.1| ATP-dependent RNA helicase eIF4A [Entamoeba dispar SAW760]
gi|165900043|gb|EDR26499.1| ATP-dependent RNA helicase eIF4A, putative [Entamoeba dispar
SAW760]
Length = 179
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
F +G T IL+ TD+L GID+Q +LVI FD P SY+
Sbjct: 90 EFRQGATRILITTDMLSRGIDVQQVSLVINFDMPVSDESYIH 131
>gi|268536792|ref|XP_002633531.1| Hypothetical protein CBG05398 [Caenorhabditis briggsae]
Length = 403
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
++ + F+ G +LV+T V EEG+D+ +CNLVIK++ + ++VQ +
Sbjct: 109 LEKLAQFSNGTVRVLVSTSVAEEGLDVSACNLVIKYNYSTNEIAHVQRRG 158
>gi|153002036|ref|YP_001367717.1| ATP-dependent RNA helicase SrmB [Shewanella baltica OS185]
gi|217974608|ref|YP_002359359.1| ATP-dependent RNA helicase SrmB [Shewanella baltica OS223]
gi|373948299|ref|ZP_09608260.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS183]
gi|386325856|ref|YP_006021973.1| DEAD/DEAH box helicase [Shewanella baltica BA175]
gi|151366654|gb|ABS09654.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS185]
gi|217499743|gb|ACK47936.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS223]
gi|333820001|gb|AEG12667.1| DEAD/DEAH box helicase domain protein [Shewanella baltica BA175]
gi|373884899|gb|EHQ13791.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS183]
Length = 419
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV-----------QSKA 52
Q + F +G N+L+ATDV GIDI VI FD P+ +Y+ + A
Sbjct: 286 QALSRFTKGEVNVLLATDVAARGIDIDDITHVINFDMPRSADTYIHRIGRTGRAGAKGTA 345
Query: 53 FTVVRHKAEQILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQRT 97
++ +I+ K ERY++ P R+++ LR N + RT
Sbjct: 346 ISLAEAHDMRIVG---KIERYIE--QPLKRRVIEELRPKNKEART 385
>gi|120600080|ref|YP_964654.1| ATP-dependent RNA helicase SrmB [Shewanella sp. W3-18-1]
gi|146291991|ref|YP_001182415.1| ATP-dependent RNA helicase SrmB [Shewanella putrefaciens CN-32]
gi|120560173|gb|ABM26100.1| DEAD/DEAH box helicase domain protein [Shewanella sp. W3-18-1]
gi|145563681|gb|ABP74616.1| DEAD/DEAH box helicase domain protein [Shewanella putrefaciens
CN-32]
Length = 419
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV-----------QSKA 52
Q + F +G N+L+ATDV GIDI VI FD P+ +Y+ + A
Sbjct: 286 QALSRFTKGEVNVLLATDVAARGIDIDDITHVINFDMPRSADTYIHRIGRTGRAGAKGTA 345
Query: 53 FTVVRHKAEQILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQRT 97
++ +I+ K ERY++ P R+++ LR N + RT
Sbjct: 346 ISLAEAHDMRIVG---KIERYIE--QPLKRRVIEELRPKNKEART 385
>gi|126173085|ref|YP_001049234.1| ATP-dependent RNA helicase SrmB [Shewanella baltica OS155]
gi|386339842|ref|YP_006036208.1| DEAD/DEAH box helicase [Shewanella baltica OS117]
gi|125996290|gb|ABN60365.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS155]
gi|334862243|gb|AEH12714.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS117]
Length = 419
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV-----------QSKA 52
Q + F +G N+L+ATDV GIDI VI FD P+ +Y+ + A
Sbjct: 286 QALSRFTKGEVNVLLATDVAARGIDIDDITHVINFDMPRSADTYIHRIGRTGRAGAKGTA 345
Query: 53 FTVVRHKAEQILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQRT 97
++ +I+ K ERY++ P R+++ LR N + RT
Sbjct: 346 ISLAEAHDMRIVG---KIERYIE--QPLKRRVIEELRPKNKEART 385
>gi|409198747|ref|ZP_11227410.1| DEAD/DEAH box helicase [Marinilabilia salmonicolor JCM 21150]
Length = 414
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
Q M F+ G IL+ATDV G+DI ++VI +D P+ T +YV
Sbjct: 285 QVMEQFSSGKNKILIATDVSARGVDIPDVDIVINYDIPEETENYVH 330
>gi|194674602|ref|XP_001787674.1| PREDICTED: ATP-dependent RNA helicase DDX51, partial [Bos taurus]
Length = 565
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
F +G +L++TD + GID+Q LV+ +D PQ+ R+YV T K+ Q +
Sbjct: 450 FEQGKIQLLISTDAMARGIDVQGVQLVVNYDAPQYLRTYVHRVGRTARAGKSGQAFT 506
>gi|84994532|ref|XP_951988.1| ATP-dependent RNA helicase [Theileria annulata strain Ankara]
gi|65302149|emb|CAI74256.1| ATP-dependent RNA helicase, putative [Theileria annulata]
Length = 455
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
SF G+ NILV TDV GIDI +LVI FD P ++ Y+
Sbjct: 323 SFKTGLFNILVVTDVGSRGIDIPFVDLVINFDVPNTSKDYIH 364
>gi|386389877|ref|ZP_10074676.1| cold-shock DEAD-box protein A [Haemophilus paraphrohaemolyticus
HK411]
gi|385694422|gb|EIG25027.1| cold-shock DEAD-box protein A [Haemophilus paraphrohaemolyticus
HK411]
Length = 647
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
QT+ G +ILVATDV GIDI+ +LV+ +D P SYV T
Sbjct: 319 QTLDKLKSGRLDILVATDVAARGIDIERISLVVNYDIPLDAESYVHRIGRT--------- 369
Query: 64 LSQYPKSERYLQYNSPKINRLLQ 86
+ +S R L + P+ RLL+
Sbjct: 370 -GRAGRSGRALLFVEPRERRLLR 391
>gi|340374238|ref|XP_003385645.1| PREDICTED: eukaryotic initiation factor 4A-like [Amphimedon
queenslandica]
Length = 449
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F G + +L+ATDVL+ GID+Q ++V FD P SY+
Sbjct: 357 MKEFRNGASRVLIATDVLQRGIDVQHVSMVCNFDLPNDKDSYIH 400
>gi|386312661|ref|YP_006008826.1| DEAD/DEAH box helicase [Shewanella putrefaciens 200]
gi|319425286|gb|ADV53360.1| DEAD/DEAH box helicase domain protein [Shewanella putrefaciens 200]
Length = 419
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV-----------QSKA 52
Q + F +G N+L+ATDV GIDI VI FD P+ +Y+ + A
Sbjct: 286 QALSRFTKGEVNVLLATDVAARGIDIDDITHVINFDMPRSADTYIHRIGRTGRAGAKGTA 345
Query: 53 FTVVRHKAEQILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQRT 97
++ +I+ K ERY++ P R+++ LR N + RT
Sbjct: 346 ISLAEAHDMRIVG---KIERYIE--QPLKRRVIEELRPKNKEART 385
>gi|404485776|ref|ZP_11020973.1| hypothetical protein HMPREF9448_01397 [Barnesiella intestinihominis
YIT 11860]
gi|404338464|gb|EJZ64911.1| hypothetical protein HMPREF9448_01397 [Barnesiella intestinihominis
YIT 11860]
Length = 449
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ--------SKAFTVVR 57
ML F +ILVATDV+ GIDI LVI +D P Y+ + T +
Sbjct: 287 MLDFKNNKIDILVATDVISRGIDIDQIGLVINYDVPHDPEDYIHRIGRTARANADGTAIT 346
Query: 58 HKAEQILSQYPKSERYLQYNSPK 80
+E+ ++ + E +L Y+ PK
Sbjct: 347 FVSEKEQGKFHRIELFLGYDIPK 369
>gi|380491708|emb|CCF35128.1| DEAD/DEAH box helicase [Colletotrichum higginsianum]
Length = 1206
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
T+ F +GI IL+AT V G+D++ LV+ FD P H+ YV
Sbjct: 875 TISDFKKGIVPILIATSVAARGLDVKQLKLVVNFDCPSHSEDYVH 919
>gi|330465173|ref|YP_004402916.1| DEAD/DEAH box helicase domain-containing protein [Verrucosispora
maris AB-18-032]
gi|328808144|gb|AEB42316.1| DEAD/DEAH box helicase domain-containing protein [Verrucosispora
maris AB-18-032]
Length = 572
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 1 MDVQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFT 54
M +T+ F G TN+LVATDV GI + LV+ DPP+ + Y+ T
Sbjct: 312 MRTRTLAEFREGRTNVLVATDVAARGIHVDGVTLVLHVDPPKDPKDYLHRAGRT 365
>gi|254581554|ref|XP_002496762.1| ZYRO0D07546p [Zygosaccharomyces rouxii]
gi|238939654|emb|CAR27829.1| ZYRO0D07546p [Zygosaccharomyces rouxii]
Length = 494
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV--VRHKAEQ 62
T F ILV+TDV G+DI + + +I+FDPP R Y+ T + K +
Sbjct: 319 TFFEFCNAERGILVSTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGAKGKGKS 378
Query: 63 ILSQYPKSERYLQY 76
++ P +L+Y
Sbjct: 379 LMFLTPNELGFLRY 392
>gi|328849200|gb|EGF98385.1| hypothetical protein MELLADRAFT_22529 [Melampsora larici-populina
98AG31]
Length = 815
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFT-VVRHKAEQ 62
Q + F G+T I++AT V G+D++ LVI +D P H YV T +K
Sbjct: 439 QVIADFKAGVTPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTC 498
Query: 63 ILSQYPKSERY 73
I P ERY
Sbjct: 499 ITFISPDQERY 509
>gi|374313822|ref|YP_005060251.1| ATP-dependent RNA helicase [Serratia symbiotica str. 'Cinara
cedri']
gi|363988048|gb|AEW44239.1| ATP-dependent RNA helicase [Serratia symbiotica str. 'Cinara
cedri']
Length = 627
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
QT+ G NIL+ATDV G+D++ +LV+ +D P + SYV T +A +
Sbjct: 292 QTLERLKDGRLNILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRA 351
Query: 64 LSQYPKSERYLQYNSPKINRLLQL 87
L ER L N I R ++L
Sbjct: 352 LLFVENRERRLLRN---IERTMKL 372
>gi|308469221|ref|XP_003096849.1| hypothetical protein CRE_24668 [Caenorhabditis remanei]
gi|308241264|gb|EFO85216.1| hypothetical protein CRE_24668 [Caenorhabditis remanei]
Length = 1030
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
V+ + F G +LV+T V EEG+DI CNLVIK++ + ++VQ +
Sbjct: 746 VEKLKQFASGGIRVLVSTSVAEEGLDISECNLVIKYNYATNVIAHVQRRGRGRANDSRSI 805
Query: 63 ILSQYPKSERYLQYNSPKINRLLQLLRRYNPD 94
+++ P E+ + N K L R N +
Sbjct: 806 LITNDPSLEKQERANKDKEKMSKAALERINEN 837
>gi|395333010|gb|EJF65388.1| ATP-dependent RNA helicase DBP10 [Dichomitus squalens LYAD-421 SS1]
Length = 962
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 27/46 (58%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
Q M +F RG TNILV TDV GIDI V+ +D PQ R +V
Sbjct: 435 QQMDAFRRGRTNILVVTDVAARGIDIPVLENVVNYDFPQGARVFVH 480
>gi|390468336|ref|XP_002807202.2| PREDICTED: ATP-dependent RNA helicase DDX55 [Callithrix jacchus]
Length = 600
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + F + + ILV TDV+ GIDI N V+++DPP ++V T + H+
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTARIGHRGSA 368
Query: 63 ILSQYPKSERYLQY 76
++ P E Y+ +
Sbjct: 369 LVFLLPMEESYINF 382
>gi|194755862|ref|XP_001960198.1| GF13246 [Drosophila ananassae]
gi|190621496|gb|EDV37020.1| GF13246 [Drosophila ananassae]
Length = 1727
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F G N+++ + VLEEGID+Q+CN V+ D + YVQ+K
Sbjct: 457 FRDGEANLMICSSVLEEGIDVQACNYVLILDSLKTFNMYVQTKG 500
>gi|160876752|ref|YP_001556068.1| ATP-dependent RNA helicase SrmB [Shewanella baltica OS195]
gi|378709963|ref|YP_005274857.1| DEAD/DEAH box helicase [Shewanella baltica OS678]
gi|418022077|ref|ZP_12661064.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS625]
gi|160862274|gb|ABX50808.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS195]
gi|315268952|gb|ADT95805.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS678]
gi|353538302|gb|EHC07857.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS625]
Length = 419
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV-----------QSKA 52
Q + F +G N+L+ATDV GIDI VI FD P+ +Y+ + A
Sbjct: 286 QALSRFTKGEVNVLLATDVAARGIDIDDITHVINFDMPRSADTYIHRIGRTGRAGAKGTA 345
Query: 53 FTVVRHKAEQILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQRT 97
++ +I+ K ERY++ P R+++ LR N + RT
Sbjct: 346 ISLAEAHDMRIVG---KIERYIE--QPLKRRVIEELRPKNKEART 385
>gi|359300107|ref|ZP_09185946.1| cold-shock DEAD box protein-A [Haemophilus [parainfluenzae] CCUG
13788]
Length = 606
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
QT+ G +ILVATDV GIDI+ +LV+ +D P SYV T
Sbjct: 287 QTLDKLKSGRLDILVATDVAARGIDIERISLVVNYDIPLDAESYVHRIGRT--------- 337
Query: 64 LSQYPKSERYLQYNSPKINRLLQ 86
+ +S R L + P+ RLL+
Sbjct: 338 -GRAGRSGRALLFVEPRERRLLR 359
>gi|348690262|gb|EGZ30076.1| hypothetical protein PHYSODRAFT_538218 [Phytophthora sojae]
Length = 466
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV--VRHKAEQ 62
T F T IL+ TDV G+DI + + +I+FDPP R Y+ T + K +
Sbjct: 257 TFFQFCNAKTGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGAKGKGKA 316
Query: 63 ILSQYPKSERYLQY 76
+L P +L+Y
Sbjct: 317 LLMLLPDELGFLKY 330
>gi|300856701|ref|YP_003781685.1| RNA helicase [Clostridium ljungdahlii DSM 13528]
gi|300436816|gb|ADK16583.1| predicted RNA helicase [Clostridium ljungdahlii DSM 13528]
Length = 525
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ T+ F G LVATDV GID+++ + VI +D PQ T SYV
Sbjct: 283 LNTLRKFKEGSLEFLVATDVAARGIDVENVSHVINYDLPQDTESYVH 329
>gi|118098682|ref|XP_415229.2| PREDICTED: ATP-dependent RNA helicase DDX51 [Gallus gallus]
Length = 764
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKA 60
+TM F +G +L++TD GIDI+ N VI +D PQ R+Y+ T KA
Sbjct: 644 RTMKEFEQGKIQLLISTDATARGIDIKGVNCVINYDTPQFIRTYIHRVGRTARAGKA 700
>gi|353238668|emb|CCA70607.1| related to RNA helicase [Piriformospora indica DSM 11827]
Length = 1042
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFT-VVRHKAEQ 62
QT+ F G+ I++AT V G+D++ +VI +D P H YV T +K
Sbjct: 671 QTIADFKNGVITIVIATSVAARGLDVKQLKVVINYDAPNHMEDYVHRAGRTGRAGNKGTC 730
Query: 63 ILSQYPKSERY 73
I P ERY
Sbjct: 731 ITFITPDQERY 741
>gi|402305768|ref|ZP_10824827.1| cold-shock DEAD-box protein A [Haemophilus sputorum HK 2154]
gi|400376881|gb|EJP29768.1| cold-shock DEAD-box protein A [Haemophilus sputorum HK 2154]
Length = 606
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
QT+ G +ILVATDV GIDI+ +LV+ +D P SYV T
Sbjct: 287 QTLDKLKSGRLDILVATDVAARGIDIERISLVVNYDIPLDAESYVHRIGRT--------- 337
Query: 64 LSQYPKSERYLQYNSPKINRLLQ 86
+ +S R L + P+ RLL+
Sbjct: 338 -GRAGRSGRALLFVEPRERRLLR 359
>gi|303283774|ref|XP_003061178.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457529|gb|EEH54828.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 456
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
F G N+LVATDV G+DI + ++VI FD PQ+++ YV
Sbjct: 300 FKAGERNVLVATDVASRGLDIPAVDVVINFDVPQNSKDYVH 340
>gi|67968237|dbj|BAE00180.1| VASA RNA helicase [Daphnia magna]
Length = 779
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
Q + F G+ NILVAT+V G+DI N V+ +D P YV T +
Sbjct: 639 QALRDFKNGVRNILVATNVAARGLDIAGVNYVVNYDLPTDIEEYVHRVGRTGRVGNIGKS 698
Query: 64 LSQYPKSERYLQYNSPKINRLLQLLRRYNPD 94
+S + + + P + + + LL + N D
Sbjct: 699 ISFFDDEK-----DGPNVGKFVSLLTKSNAD 724
>gi|295394794|ref|ZP_06805009.1| ATP-dependent RNA helicase DeaD [Brevibacterium mcbrellneri ATCC
49030]
gi|294972390|gb|EFG48250.1| ATP-dependent RNA helicase DeaD [Brevibacterium mcbrellneri ATCC
49030]
Length = 586
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFT-VVRHKAEQ 62
+T+ + G +ILVATDV G+D++ +LV+ FD P T SYV T E
Sbjct: 296 RTVEALRSGSIDILVATDVAARGLDVERISLVVNFDIPHDTESYVHRIGRTGRAGRTGEA 355
Query: 63 ILSQYPKSERYLQ 75
IL P+ R L+
Sbjct: 356 ILFVTPRENRLLK 368
>gi|198428257|ref|XP_002120168.1| PREDICTED: similar to Ddx58 protein [Ciona intestinalis]
Length = 926
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
T+ SF G T I+VAT V EEG DI +CNLVI ++ + +VQ +
Sbjct: 682 TISSFRDGSTKIIVATSVAEEGFDIPACNLVIAYNYSTNEIGHVQRQG 729
>gi|224072122|ref|XP_002196880.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Taeniopygia
guttata]
Length = 707
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV 48
TM F +G +L++TD GID++ N VI +D PQ R+YV
Sbjct: 588 TMKEFEQGKIQLLISTDATARGIDVKRVNYVINYDAPQFIRTYV 631
>gi|393788148|ref|ZP_10376279.1| hypothetical protein HMPREF1068_02559 [Bacteroides nordii
CL02T12C05]
gi|392656361|gb|EIY50000.1| hypothetical protein HMPREF1068_02559 [Bacteroides nordii
CL02T12C05]
Length = 413
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F G NILVATD++ GIDI LVI FD P + YV
Sbjct: 287 MHEFKSGRINILVATDIVSRGIDIDDIRLVINFDVPHDSEDYVH 330
>gi|297263806|ref|XP_001098453.2| PREDICTED: ATP-dependent RNA helicase DDX55-like isoform 1 [Macaca
mulatta]
Length = 743
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + F + + ILV TDV+ GIDI N V+++DPP + ++V T + H
Sbjct: 452 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 511
Query: 63 ILSQYPKSERYLQY 76
++ P E Y+ +
Sbjct: 512 LVFLLPMEESYINF 525
>gi|105969677|gb|ABF81676.1| eIF4A [Plasmodium falciparum]
Length = 696
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 25/41 (60%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
F RGI NILVATDV G+DI + VI FD P + Y+
Sbjct: 446 FKRGIKNILVATDVAARGLDISNIKHVINFDLPSNIDDYIH 486
>gi|403387074|ref|ZP_10929131.1| ATP-dependent RNA helicase (superfamily II) [Clostridium sp. JC122]
Length = 546
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ T+ F G N L+ATDV GID++ VI +D PQ T SYV
Sbjct: 283 LNTLKKFKTGNLNYLIATDVAARGIDVEDITHVINYDLPQDTESYVH 329
>gi|334563437|ref|ZP_08516428.1| putative ATP-dependent RNA helicase [Corynebacterium bovis DSM
20582]
Length = 422
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
++++ F G +LVATD+ GIDI+ +LV+ DPP ++YV T + Q
Sbjct: 316 MRSIADFTSGDATVLVATDIAARGIDIKGVDLVVHVDPPAEHKAYVHRAGRTGRAGASGQ 375
Query: 63 ILS 65
+L+
Sbjct: 376 VLT 378
>gi|295134684|ref|YP_003585360.1| ATP-dependent RNA helicase [Zunongwangia profunda SM-A87]
gi|294982699|gb|ADF53164.1| ATP-dependent RNA helicase [Zunongwangia profunda SM-A87]
Length = 447
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQILSQY 67
F+ G+T I++ATDV+ G+D+ + + VI FD P + +Y+ T K IL
Sbjct: 289 FDEGLTRIMIATDVMARGLDLDAVSHVINFDTPNYPENYMHRIGRTGRAEKKGNSILFTT 348
Query: 68 PKSERYLQ 75
K YL+
Sbjct: 349 EKELEYLK 356
>gi|170727393|ref|YP_001761419.1| DEAD/DEAH box helicase [Shewanella woodyi ATCC 51908]
gi|169812740|gb|ACA87324.1| DEAD/DEAH box helicase domain protein [Shewanella woodyi ATCC
51908]
Length = 447
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
Q M F+RG+ +ILV TDV G+D+ + +LVI FD P+ YV
Sbjct: 287 QIMDQFSRGMQDILVTTDVASRGLDLLNVSLVINFDMPKFAEEYVH 332
>gi|70826664|gb|AAZ13600.1| eukaryotic initiation factor 4A-like protein [Plasmodium
falciparum]
Length = 670
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 25/41 (60%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
F RGI NILVATDV G+DI + VI FD P + Y+
Sbjct: 420 FKRGIKNILVATDVAARGLDISNIKHVINFDLPSNIDDYIH 460
>gi|198462622|ref|XP_002135340.1| GA28491 [Drosophila pseudoobscura pseudoobscura]
gi|198150906|gb|EDY73967.1| GA28491 [Drosophila pseudoobscura pseudoobscura]
Length = 537
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 1 MDVQTMLS-FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
MD ++L+ F G NILVATDV G+D+ VI FD PQ + Y+
Sbjct: 389 MDRDSVLNDFRSGRANILVATDVAARGLDVDGIKYVINFDYPQSSEDYIH 438
>gi|195069886|ref|XP_001997052.1| GH22580 [Drosophila grimshawi]
gi|193891570|gb|EDV90436.1| GH22580 [Drosophila grimshawi]
Length = 793
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
+ SF G +ILVATDV G+D+ VI +D P ++ YV T + +
Sbjct: 436 LSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYT 495
Query: 66 QYPKSERYLQYNSPKINRLLQLLRRYN 92
+ S N+ K N L+Q+LR N
Sbjct: 496 LFTHS------NANKANDLIQVLREAN 516
>gi|340349082|ref|ZP_08672106.1| DEAD/DEAH box family ATP-dependent RNA helicase [Prevotella
nigrescens ATCC 33563]
gi|339612648|gb|EGQ17451.1| DEAD/DEAH box family ATP-dependent RNA helicase [Prevotella
nigrescens ATCC 33563]
Length = 570
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ M F G ++LVATD+L GIDI +VI +D P YV
Sbjct: 286 EMMFKFKSGQIDVLVATDILSRGIDIDDITMVINYDVPHDAEDYVH 331
>gi|409124030|ref|ZP_11223425.1| ATP-dependent RNA helicase [Gillisia sp. CBA3202]
Length = 449
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
++++ F G + ILVATDV+ G+DI++ + VI FD P++ +Y+
Sbjct: 283 LRSIKQFGEGFSRILVATDVMARGLDIENVSHVINFDTPEYPENYMH 329
>gi|395846785|ref|XP_003796074.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Otolemur garnettii]
Length = 600
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + F + + ILV TDV+ GIDI N V+++DPP + ++V T + H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 63 ILSQYPKSERYLQY 76
++ P E Y+ +
Sbjct: 369 LVFLLPMEESYINF 382
>gi|325291138|ref|YP_004267319.1| DEAD/DEAH box helicase [Syntrophobotulus glycolicus DSM 8271]
gi|324966539|gb|ADY57318.1| DEAD/DEAH box helicase domain protein [Syntrophobotulus glycolicus
DSM 8271]
Length = 518
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
F G+T+ILVATDV G+DI + FD PQ SYV
Sbjct: 286 FKEGVTDILVATDVAARGLDISGVTHIYNFDIPQDPESYVH 326
>gi|293332377|ref|NP_001169481.1| uncharacterized protein LOC100383354 [Zea mays]
gi|224029605|gb|ACN33878.1| unknown [Zea mays]
Length = 324
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + SF+ + +LV TDV G+DI S +L++++DPPQ ++ T + +
Sbjct: 8 KALASFSALSSGVLVCTDVAARGLDIPSVDLIVQYDPPQDPNVFIHRAGRTARYDQEGDA 67
Query: 63 ILSQYPKSERYLQY 76
I+ PK + Y+++
Sbjct: 68 IVFLLPKEDTYVEF 81
>gi|195170555|ref|XP_002026077.1| GL16096 [Drosophila persimilis]
gi|194110957|gb|EDW33000.1| GL16096 [Drosophila persimilis]
Length = 554
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 1 MDVQTMLS-FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
MD ++L+ F G NILVATDV G+D+ VI FD PQ + Y+
Sbjct: 406 MDRDSVLNDFRSGRANILVATDVAARGLDVDGIKYVINFDYPQSSEDYIH 455
>gi|109099284|ref|XP_001105887.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Macaca mulatta]
Length = 664
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F +G +L++TD GID+Q LV+ +D PQ+ R+YV T K Q +
Sbjct: 549 FEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTYVHRAGRTARAGKMGQAFTLLL 608
Query: 69 KSE--RYLQ 75
K + R+LQ
Sbjct: 609 KVQERRFLQ 617
>gi|345323103|ref|XP_001507486.2| PREDICTED: ATP-dependent RNA helicase DDX55-like [Ornithorhynchus
anatinus]
Length = 1090
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + F + ILV TDV+ GIDI N V+++DPP + ++V T + H+
Sbjct: 419 KIFMEFRHLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHEGSA 478
Query: 63 ILSQYPKSERYLQYNS 78
++ P E Y+ + S
Sbjct: 479 LVFLLPMEESYINFLS 494
>gi|290994831|ref|XP_002680035.1| ATP-dependent RNA helicase [Naegleria gruberi]
gi|284093654|gb|EFC47291.1| ATP-dependent RNA helicase [Naegleria gruberi]
Length = 629
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+F RGIT ILVATDV G+DI VI +D P++ YV
Sbjct: 454 NFRRGITPILVATDVASRGLDINDVGHVINYDLPENIEDYVH 495
>gi|255953957|ref|XP_002567731.1| Pc21g06890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589442|emb|CAP95586.1| Pc21g06890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1495
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
++ F + N L AT V EEG+DI CNLV++FD YVQS+
Sbjct: 475 LVKFRKSEINCLFATSVAEEGLDIPDCNLVVRFDLYDTVIQYVQSRG 521
>gi|384918672|ref|ZP_10018741.1| ATP-dependent RNA helicase RhlE [Citreicella sp. 357]
gi|384467385|gb|EIE51861.1| ATP-dependent RNA helicase RhlE [Citreicella sp. 357]
Length = 487
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 14/89 (15%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV-----------QSKA 52
+T+ F G +L+A+DV G+D+ S + V FD P H YV + KA
Sbjct: 293 RTLDGFRDGSIRLLIASDVAARGLDVPSVSHVFNFDVPGHPEDYVHRIGRTGRAGREGKA 352
Query: 53 FTVVRHKAEQILSQYPKSERYLQYNSPKI 81
FT+V + E+ + E+ LQ + P++
Sbjct: 353 FTIVSGRDEK---NFDAVEKLLQKDIPRV 378
>gi|221502044|gb|EEE27790.1| helicase, putative [Toxoplasma gondii VEG]
Length = 2477
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 16 ILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+LV+T VLEEGID+ +CNLV++ D P +VQ+K
Sbjct: 1579 LLVSTSVLEEGIDVPACNLVVQMDMPSSLVRFVQAKG 1615
>gi|389748758|gb|EIM89935.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 452
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ---ILS 65
F G +ILVATDV G+DI S ++VI FD P H++ Y+ T +A + +++
Sbjct: 300 FKSGGRSILVATDVASRGLDIPSVDVVINFDIPTHSKDYIHRVGRTARAGRAGKSITLVT 359
Query: 66 QY 67
QY
Sbjct: 360 QY 361
>gi|326929902|ref|XP_003211092.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Meleagris
gallopavo]
Length = 582
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKA 60
T+ F +G +L++TD GIDI+ N VI +D PQ R+Y+ T KA
Sbjct: 463 TLKEFEQGKIQLLISTDATARGIDIKGVNCVINYDTPQFIRTYIHRVGRTARAGKA 518
>gi|311277865|ref|YP_003940096.1| DEAD/DEAH box helicase [Enterobacter cloacae SCF1]
gi|308747060|gb|ADO46812.1| DEAD/DEAH box helicase domain protein [Enterobacter cloacae SCF1]
Length = 643
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
QT+ G +IL+ATDV G+D++ +LV+ +D P T SYV T +A +
Sbjct: 286 QTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDTESYVHRIGRTGRAGRAGRA 345
Query: 64 LSQYPKSERYLQYNSPKINRLLQL 87
L ER L N I RL++L
Sbjct: 346 LLFVENRERRLLRN---IERLMKL 366
>gi|445118247|ref|ZP_21378972.1| hypothetical protein HMPREF0662_02039 [Prevotella nigrescens F0103]
gi|444839625|gb|ELX66682.1| hypothetical protein HMPREF0662_02039 [Prevotella nigrescens F0103]
Length = 570
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV 48
+ M F G ++LVATD+L GIDI +VI +D P YV
Sbjct: 286 EMMFKFKSGQIDVLVATDILSRGIDIDDITMVINYDVPHDAEDYV 330
>gi|340368845|ref|XP_003382961.1| PREDICTED: probable ATP-dependent RNA helicase DDX43-like
[Amphimedon queenslandica]
Length = 626
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 25/46 (54%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
Q + F+ G ILVATDV GIDI+ VI FD P H YV
Sbjct: 517 QALEDFSTGAAPILVATDVASRGIDIKDITFVINFDFPMHIEDYVH 562
>gi|298711900|emb|CBJ48587.1| dicer-like 3 [Ectocarpus siliculosus]
Length = 1557
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
QT+ F G ILV TD EGID+ CNLV+ D + +RS + ++
Sbjct: 440 QTINMFRAGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRSLIHTRG 488
>gi|387133384|ref|YP_006299356.1| DEAD/DEAH box helicase [Prevotella intermedia 17]
gi|386376232|gb|AFJ08050.1| DEAD/DEAH box helicase [Prevotella intermedia 17]
Length = 579
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV 48
+ M F G ++LVATD+L GIDI +VI +D P YV
Sbjct: 286 EMMFKFKSGQIDVLVATDILARGIDIDDITMVINYDVPHDAEDYV 330
>gi|344923278|ref|ZP_08776739.1| superfamily II DNA/RNA helicase [Candidatus Odyssella
thessalonicensis L13]
Length = 413
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+T+ +F +G ILV TDV GID+ LVI FD P H YV
Sbjct: 284 ETLENFRKGNYRILVTTDVAARGIDVSGITLVINFDVPVHEEDYVH 329
>gi|384161519|ref|YP_005543592.1| non-specific DNA-binding protein Hbsu [Bacillus amyloliquefaciens
TA208]
gi|384166429|ref|YP_005547808.1| non-specific DNA-binding protein Hbsu [Bacillus amyloliquefaciens
LL3]
gi|384170630|ref|YP_005552008.1| ATP-dependent RNA helicase [Bacillus amyloliquefaciens XH7]
gi|328555607|gb|AEB26099.1| non-specific DNA-binding protein Hbsu [Bacillus amyloliquefaciens
TA208]
gi|328913984|gb|AEB65580.1| non-specific DNA-binding protein Hbsu [Bacillus amyloliquefaciens
LL3]
gi|341829909|gb|AEK91160.1| ATP-dependent RNA helicase [Bacillus amyloliquefaciens XH7]
Length = 479
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFT-VVRHKAEQIL 64
M F RG L+ATDV GIDI++ +LVI +D P SYV T H+ I
Sbjct: 283 MNEFKRGEFRYLIATDVAARGIDIENISLVINYDIPLEKESYVHRTGRTGRAGHRGRAIT 342
Query: 65 SQYPKSERYL 74
P R+L
Sbjct: 343 FVTPSESRFL 352
>gi|323496504|ref|ZP_08101562.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrio
sinaloensis DSM 21326]
gi|323318781|gb|EGA71734.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrio
sinaloensis DSM 21326]
Length = 444
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI + VI FD P+HT YV
Sbjct: 289 MSQFERAVFKILVTTDVASRGLDIANVTHVINFDMPKHTEEYVH 332
>gi|254490715|ref|ZP_05103899.1| DbpA RNA binding domain family [Methylophaga thiooxidans DMS010]
gi|224464070|gb|EEF80335.1| DbpA RNA binding domain family [Methylophaga thiooxydans DMS010]
Length = 605
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+T+ G +ILVATDV G+DIQ + V+ +D P T SYV T K E
Sbjct: 290 KTIEKMKAGKIDILVATDVAARGLDIQRMSHVVNYDIPYDTESYVHRIGRTGRAGRKGEA 349
Query: 63 ILSQYPKSERYL 74
IL P+ R L
Sbjct: 350 ILFVAPRERRML 361
>gi|229917498|ref|YP_002886144.1| DEAD/DEAH box helicase [Exiguobacterium sp. AT1b]
gi|229468927|gb|ACQ70699.1| DEAD/DEAH box helicase domain protein [Exiguobacterium sp. AT1b]
Length = 481
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 14/88 (15%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV-----------QSKAFT 54
M F G LVATDV GID+ + LVI +D P SYV Q A T
Sbjct: 285 MNGFKMGNFRYLVATDVAARGIDVDNVELVINYDVPVEKESYVHRTGRTGRAGKQGTAIT 344
Query: 55 VVRHKAEQILSQYPKSERYLQYNSPKIN 82
++ + E+++ E Y+Q+ P I+
Sbjct: 345 LMTRQEERLIGAI---ESYVQFEIPMID 369
>gi|148670595|gb|EDL02542.1| DNA segment, Chr 11, Lothar Hennighausen 2, expressed, isoform
CRA_a [Mus musculus]
Length = 609
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F GI ++LVAT V EEG+DI CN+V+++ + S VQ++ R +A Q + +
Sbjct: 358 FRDGILSLLVATSVAEEGLDIAQCNVVVRYGLLTNEISMVQARG----RARAGQSVYSFL 413
Query: 69 KSERYLQYNSPKINRLLQLL--------RRYNPDQ 95
+E + N L++L ++ +PD+
Sbjct: 414 ATEGSREMKRELTNEALEVLMEKAVAAVQKMDPDE 448
>gi|70608133|ref|NP_084426.2| probable ATP-dependent RNA helicase DHX58 [Mus musculus]
gi|341940441|sp|Q99J87.2|DHX58_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DHX58; AltName:
Full=Probable ATP-dependent helicase LGP2; AltName:
Full=Protein D11Lgp2; AltName: Full=RIG-I-like receptor
3; Short=RLR-3; AltName: Full=RIG-I-like receptor Lgp2;
Short=RLR
Length = 678
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F GI ++LVAT V EEG+DI CN+V+++ + S VQ++ R +A Q + +
Sbjct: 427 FRDGILSLLVATSVAEEGLDIAQCNVVVRYGLLTNEISMVQARG----RARAGQSVYSFL 482
Query: 69 KSERYLQYNSPKINRLLQLL--------RRYNPDQ 95
+E + N L++L ++ +PD+
Sbjct: 483 ATEGSREMKRELTNEALEVLMEKAVAAVQKMDPDE 517
>gi|261213074|ref|ZP_05927358.1| ATP-dependent RNA helicase [Vibrio sp. RC341]
gi|260838139|gb|EEX64816.1| ATP-dependent RNA helicase [Vibrio sp. RC341]
Length = 448
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI S VI FD P+HT YV
Sbjct: 289 MSQFERTVFKILVTTDVASRGLDIPSVTHVINFDMPKHTEEYVH 332
>gi|13194586|gb|AAK15474.1| unknown [Mus musculus]
gi|13194588|gb|AAK15475.1| unknown [Mus musculus]
gi|20809730|gb|AAH29209.1| DEXH (Asp-Glu-X-His) box polypeptide 58 [Mus musculus]
gi|148670596|gb|EDL02543.1| DNA segment, Chr 11, Lothar Hennighausen 2, expressed, isoform
CRA_b [Mus musculus]
Length = 678
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F GI ++LVAT V EEG+DI CN+V+++ + S VQ++ R +A Q + +
Sbjct: 427 FRDGILSLLVATSVAEEGLDIAQCNVVVRYGLLTNEISMVQARG----RARAGQSVYSFL 482
Query: 69 KSERYLQYNSPKINRLLQLL--------RRYNPDQ 95
+E + N L++L ++ +PD+
Sbjct: 483 ATEGSREMKRELTNEALEVLMEKAVAAVQKMDPDE 517
>gi|358396694|gb|EHK46075.1| hypothetical protein TRIATDRAFT_292263 [Trichoderma atroviride IMI
206040]
Length = 1456
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
V ++ F RG N L AT V EEGID+ C+++++FD Y+QSK
Sbjct: 422 VVSLQKFKRGEFNCLFATSVAEEGIDVPECDVIVRFDLCVSAIQYIQSKG 471
>gi|340352522|ref|ZP_08675386.1| DEAD/DEAH box family ATP-dependent RNA helicase [Prevotella pallens
ATCC 700821]
gi|339613492|gb|EGQ18232.1| DEAD/DEAH box family ATP-dependent RNA helicase [Prevotella pallens
ATCC 700821]
Length = 581
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV 48
+ M F G ++LVATD+L GIDI +VI +D P YV
Sbjct: 286 EMMFKFKSGQIDVLVATDILSRGIDIDDITMVINYDVPNDAEDYV 330
>gi|332029665|gb|EGI69554.1| Putative ATP-dependent RNA helicase DDX17 [Acromyrmex echinatior]
Length = 595
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G ILVATDV G+D++ VI FD P + YV T R K + +
Sbjct: 422 FRSGKAPILVATDVAARGLDVEDVKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFT 481
Query: 69 KSERYLQYNSPKINRLLQLLRRYN 92
+ N+ K N L+Q+L+ N
Sbjct: 482 PN------NANKANDLIQVLKEAN 499
>gi|378754893|gb|EHY64921.1| DEAD-box ATP-dependent RNA helicase 6 [Nematocida sp. 1 ERTm2]
Length = 517
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 10 NRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
++G ILV+TD++ GID+ S N+VI FD PQ T SY+
Sbjct: 434 SKGECRILVSTDLVTRGIDVPSVNVVINFDLPQSTESYLH 473
>gi|375133176|ref|YP_005049584.1| ATP-dependent RNA helicase [Vibrio furnissii NCTC 11218]
gi|315182351|gb|ADT89264.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrio
furnissii NCTC 11218]
Length = 442
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI + VI FD P+HT YV
Sbjct: 289 MSQFERAVFKILVTTDVASRGLDIANVTHVINFDMPKHTEEYVH 332
>gi|254506018|ref|ZP_05118163.1| ATP-dependent rna helicase, dead box family [Vibrio
parahaemolyticus 16]
gi|219551241|gb|EED28221.1| ATP-dependent rna helicase, dead box family [Vibrio
parahaemolyticus 16]
Length = 454
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI + VI FD P+HT YV
Sbjct: 300 MSQFERAVFKILVTTDVASRGLDIANVTHVINFDMPKHTEEYVH 343
>gi|74142314|dbj|BAE31919.1| unnamed protein product [Mus musculus]
Length = 672
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F GI ++LVAT V EEG+DI CN+V+++ + S VQ++ R +A Q + +
Sbjct: 427 FRDGILSLLVATSVAEEGLDIAQCNVVVRYGLLTNEISMVQARG----RARAGQSVYSFL 482
Query: 69 KSERYLQYNSPKINRLLQLL--------RRYNPDQ 95
+E + N L++L ++ +PD+
Sbjct: 483 ATEGSREMKRELTNEALEVLMEKAVAAVQKMDPDE 517
>gi|32490970|ref|NP_871224.1| hypothetical protein WGLp221 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166176|dbj|BAC24367.1| deaD [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 583
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+T+ F G+ +ILVATDV G+D+ +LVI +D P SY+ T + +
Sbjct: 286 KTLNRFKTGLLDILVATDVAARGLDVDRISLVINYDIPLDVESYIHRIGRTGRAGRTGKA 345
Query: 64 LSQYPKSERYLQYN 77
L ER + YN
Sbjct: 346 LMFVENRERKILYN 359
>gi|424044145|ref|ZP_17781768.1| type III restriction enzyme, res subunit [Vibrio cholerae HENC-03]
gi|408888674|gb|EKM27135.1| type III restriction enzyme, res subunit [Vibrio cholerae HENC-03]
Length = 443
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI + VI FD P+HT YV
Sbjct: 289 MSQFERAVFKILVTTDVASRGLDIATVTHVINFDMPKHTEEYVH 332
>gi|423306897|ref|ZP_17284896.1| hypothetical protein HMPREF1072_03836 [Bacteroides uniformis
CL03T00C23]
gi|423308519|ref|ZP_17286509.1| hypothetical protein HMPREF1073_01259 [Bacteroides uniformis
CL03T12C37]
gi|392677982|gb|EIY71394.1| hypothetical protein HMPREF1072_03836 [Bacteroides uniformis
CL03T00C23]
gi|392686960|gb|EIY80258.1| hypothetical protein HMPREF1073_01259 [Bacteroides uniformis
CL03T12C37]
Length = 428
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ M F G NILVATD++ GIDI LVI +D P + YV
Sbjct: 285 EVMYEFKAGRINILVATDIVARGIDIDDIRLVINYDVPHDSEDYVH 330
>gi|270296763|ref|ZP_06202962.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270272750|gb|EFA18613.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 429
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ M F G NILVATD++ GIDI LVI +D P + YV
Sbjct: 285 EVMYEFKAGRINILVATDIVARGIDIDDIRLVINYDVPHDSEDYVH 330
>gi|212557425|gb|ACJ29879.1| ATP-dependent RNA helicase, DEAD box family [Shewanella
piezotolerans WP3]
Length = 447
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
Q M F+RG+ ILV TDV G+D+ + +LVI FD P+ YV
Sbjct: 287 QIMDEFSRGLQQILVTTDVASRGLDLLNVSLVINFDMPKFAEEYVH 332
>gi|414876216|tpg|DAA53347.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 641
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + SF+ + +LV TDV G+DI S +L++++DPPQ ++ T + +
Sbjct: 325 KALASFSALSSGVLVCTDVAARGLDIPSVDLIVQYDPPQDPNVFIHRAGRTARYDQEGDA 384
Query: 63 ILSQYPKSERYLQY 76
I+ PK + Y+++
Sbjct: 385 IVFLLPKEDTYVEF 398
>gi|269962799|ref|ZP_06177140.1| ATP-dependent RNA helicase, DEAD box family [Vibrio harveyi 1DA3]
gi|269832489|gb|EEZ86607.1| ATP-dependent RNA helicase, DEAD box family [Vibrio harveyi 1DA3]
Length = 447
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI + VI FD P+HT YV
Sbjct: 293 MSQFERAVFKILVTTDVASRGLDIATVTHVINFDMPKHTEEYVH 336
>gi|262403204|ref|ZP_06079764.1| ATP-dependent RNA helicase [Vibrio sp. RC586]
gi|262350703|gb|EEY99836.1| ATP-dependent RNA helicase [Vibrio sp. RC586]
Length = 448
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI S VI FD P+HT YV
Sbjct: 289 MGQFERTVFKILVTTDVASRGLDIPSVTHVINFDMPKHTEEYVH 332
>gi|410867026|ref|YP_006981637.1| DEAD/DEAH box helicase [Propionibacterium acidipropionici ATCC
4875]
gi|410823667|gb|AFV90282.1| DEAD/DEAH box helicase [Propionibacterium acidipropionici ATCC
4875]
Length = 772
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFT 54
+ + +F +G +LVATDV GID+ LV++ DPP +++ Y+ T
Sbjct: 578 RVLAAFKKGTLPVLVATDVAARGIDVDDVTLVLQVDPPMNSKDYLHRSGRT 628
>gi|350532821|ref|ZP_08911762.1| ATP-dependent RNA helicase [Vibrio rotiferianus DAT722]
Length = 447
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI + VI FD P+HT YV
Sbjct: 293 MSQFERAVFKILVTTDVASRGLDIATVTHVINFDMPKHTEEYVH 336
>gi|340514590|gb|EGR44851.1| predicted protein [Trichoderma reesei QM6a]
Length = 1416
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+ ++ F G TN L AT V EEGID+ C+++++FD Y+QSK
Sbjct: 399 IVSLQKFRYGETNCLFATSVAEEGIDVPECDVIVRFDLYSSAIQYIQSKG 448
>gi|451972716|ref|ZP_21925920.1| dead/deah box helicase domain protein [Vibrio alginolyticus E0666]
gi|451931409|gb|EMD79099.1| dead/deah box helicase domain protein [Vibrio alginolyticus E0666]
Length = 443
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI + VI FD P+HT YV
Sbjct: 289 MSQFERAVFKILVTTDVASRGLDIATVTHVINFDMPKHTEEYVH 332
>gi|449524338|ref|XP_004169180.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like [Cucumis
sativus]
Length = 579
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV--VRHKAEQ 62
T +FN+ IL+ TDV G+DI + + ++++DPP + Y+ T K
Sbjct: 380 TFFAFNKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGEGSKGNA 439
Query: 63 ILSQYPKSERYLQY 76
+L P+ ++L+Y
Sbjct: 440 LLFLIPEELQFLRY 453
>gi|71982860|ref|NP_492161.3| Protein DRH-3 [Caenorhabditis elegans]
gi|38422755|emb|CAB02082.3| Protein DRH-3 [Caenorhabditis elegans]
Length = 1119
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 27/35 (77%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFD 39
T+ FN G ++VAT V+EEG+D+ +CNL+IK++
Sbjct: 819 TLDKFNNGRLKVIVATSVVEEGLDVTACNLIIKYN 853
>gi|417951888|ref|ZP_12594973.1| putative ATP-dependent RNA helicase [Vibrio splendidus ATCC
33789]
gi|342803840|gb|EGU39189.1| putative ATP-dependent RNA helicase [Vibrio splendidus ATCC
33789]
Length = 163
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
Q + SF G T +L+ATDV+ GI I +VI F+ P H+ +YV
Sbjct: 14 AQALDSFKNGDTRVLIATDVMARGIHIDQLPIVINFELPPHSATYVH 60
>gi|269965345|ref|ZP_06179465.1| ATP-dependent RNA helicase, DEAD box family [Vibrio alginolyticus
40B]
gi|269829991|gb|EEZ84220.1| ATP-dependent RNA helicase, DEAD box family [Vibrio alginolyticus
40B]
Length = 447
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI + VI FD P+HT YV
Sbjct: 293 MSQFERAVFKILVTTDVASRGLDIATVTHVINFDMPKHTEEYVH 336
>gi|260769645|ref|ZP_05878578.1| ATP-dependent RNA helicase [Vibrio furnissii CIP 102972]
gi|260614983|gb|EEX40169.1| ATP-dependent RNA helicase [Vibrio furnissii CIP 102972]
Length = 442
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI + VI FD P+HT YV
Sbjct: 289 MSQFERAVFKILVTTDVASRGLDIANVTHVINFDMPKHTEEYVH 332
>gi|91223278|ref|ZP_01258544.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrio
alginolyticus 12G01]
gi|91192091|gb|EAS78354.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrio
alginolyticus 12G01]
Length = 443
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI + VI FD P+HT YV
Sbjct: 289 MSQFERAVFKILVTTDVASRGLDIATVTHVINFDMPKHTEEYVH 332
>gi|383775371|ref|YP_005459937.1| putative DEAD/DEAH box helicase [Actinoplanes missouriensis 431]
gi|381368603|dbj|BAL85421.1| putative DEAD/DEAH box helicase [Actinoplanes missouriensis 431]
Length = 571
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+T+ F G TN+LVATDV GI + +LV+ DPP+ + Y+ T ++ +
Sbjct: 292 RTLAEFKEGRTNVLVATDVAARGIHVDGISLVMHVDPPKDPKDYLHRAGRTARAGESGAV 351
Query: 64 LSQ-YPKSERYLQ 75
++ PK R Q
Sbjct: 352 VTLVLPKQRRTTQ 364
>gi|339259444|ref|XP_003368902.1| conserved hypothetical protein [Trichinella spiralis]
gi|316964235|gb|EFV49440.1| conserved hypothetical protein [Trichinella spiralis]
Length = 268
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQ-- 66
F G IL+AT +LEEGID+ +CNLVI+++ S +Q + T + A +++
Sbjct: 18 FKEGEFKILIATSLLEEGIDVAACNLVIRYNYVTSVISKIQQRGRTRKGNGAVILIAYEG 77
Query: 67 -YPKSERYLQ 75
Y K E+ L+
Sbjct: 78 FYSKKEKTLE 87
>gi|221481321|gb|EEE19715.1| helicase, putative [Toxoplasma gondii GT1]
Length = 2720
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 16 ILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+LV+T VLEEGID+ +CNLV++ D P +VQ+K
Sbjct: 1822 LLVSTSVLEEGIDVPACNLVVQMDMPSSLVRFVQAKG 1858
>gi|84394007|ref|ZP_00992745.1| DNA and RNA helicase [Vibrio splendidus 12B01]
gi|84375344|gb|EAP92253.1| DNA and RNA helicase [Vibrio splendidus 12B01]
Length = 412
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
Q + SF G T +L+ATDV+ GI I +VI FD P H+ +YV
Sbjct: 279 QALESFKNGETRVLIATDVMARGIHIDQLPVVINFDLPTHSATYVH 324
>gi|443893959|dbj|GAC71147.1| dsRNA-specific nuclease Dicer and related ribonucleases [Pseudozyma
antarctica T-34]
Length = 1764
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 3 VQTMLSFNR-GITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
VQ + F R TN+LVAT + EEG+DIQ+ NLVI+FD S++Q
Sbjct: 721 VQVLNRFRRRAPTNLLVATSIAEEGLDIQAANLVIRFDLFNRHISFLQ 768
>gi|308175626|ref|YP_003922331.1| non-specific DNA-binding protein Hbsu [Bacillus amyloliquefaciens
DSM 7]
gi|307608490|emb|CBI44861.1| non-specific DNA-binding protein Hbsu [Bacillus amyloliquefaciens
DSM 7]
Length = 475
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFT-VVRHKAEQIL 64
M F RG L+ATDV GIDI++ +LVI +D P SYV T H+ I
Sbjct: 283 MNEFKRGEFRYLIATDVAARGIDIENISLVINYDIPLEKESYVHRTGRTGRAGHRGRAIT 342
Query: 65 SQYPKSERYL 74
P R+L
Sbjct: 343 FVTPSESRFL 352
>gi|238878350|gb|EEQ41988.1| ATP-dependent RNA helicase ROK1 [Candida albicans WO-1]
Length = 640
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G +L+ TDVL G+D + NLVI +D PQ ++YV T KA + ++ +
Sbjct: 486 FKNGDIWVLITTDVLARGVDFKGVNLVINYDVPQSAQAYVHRIGRTGRGGKAGKAVTFFT 545
Query: 69 KSE 71
K +
Sbjct: 546 KED 548
>gi|170093371|ref|XP_001877907.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647766|gb|EDR12010.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 441
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ---ILS 65
F G + ILVATDV G+D+ + ++VI +D P H++ Y+ T +A + +++
Sbjct: 291 FKSGKSKILVATDVASRGLDVPNVDVVINYDTPTHSKDYIHRVGRTARAGRAGKSILMVT 350
Query: 66 QY 67
QY
Sbjct: 351 QY 352
>gi|308466625|ref|XP_003095565.1| CRE-DRH-3 protein [Caenorhabditis remanei]
gi|308245160|gb|EFO89112.1| CRE-DRH-3 protein [Caenorhabditis remanei]
Length = 979
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFD 39
FN G ++VAT V+EEG+D+ SCNL+IK++
Sbjct: 661 FNSGKLKVIVATSVVEEGLDVTSCNLIIKYN 691
>gi|424032469|ref|ZP_17771886.1| type III restriction enzyme, res subunit [Vibrio cholerae HENC-01]
gi|408875527|gb|EKM14671.1| type III restriction enzyme, res subunit [Vibrio cholerae HENC-01]
Length = 443
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI + VI FD P+HT YV
Sbjct: 289 MSQFERAVFKILVTTDVASRGLDIATVTHVINFDMPKHTEEYVH 332
>gi|242051997|ref|XP_002455144.1| hypothetical protein SORBIDRAFT_03g005040 [Sorghum bicolor]
gi|241927119|gb|EES00264.1| hypothetical protein SORBIDRAFT_03g005040 [Sorghum bicolor]
Length = 644
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + SF+ + +LV TDV G+DI S +L++++DPPQ ++ T + +
Sbjct: 328 KALASFSALSSGVLVCTDVAARGLDIPSVDLIVQYDPPQDPNVFIHRAGRTARYDQEGDA 387
Query: 63 ILSQYPKSERYLQY 76
I+ PK + Y+++
Sbjct: 388 IVFLLPKEDTYVEF 401
>gi|195126028|ref|XP_002007476.1| GI12369 [Drosophila mojavensis]
gi|193919085|gb|EDW17952.1| GI12369 [Drosophila mojavensis]
Length = 794
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
+ SF G +ILVATDV G+D+ VI +D P ++ YV T + +
Sbjct: 433 LSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYT 492
Query: 66 QYPKSERYLQYNSPKINRLLQLLRRYN 92
+ S N+ K N L+Q+LR N
Sbjct: 493 LFTHS------NANKANDLIQVLREAN 513
>gi|160888241|ref|ZP_02069244.1| hypothetical protein BACUNI_00650 [Bacteroides uniformis ATCC 8492]
gi|156862187|gb|EDO55618.1| DEAD/DEAH box helicase [Bacteroides uniformis ATCC 8492]
Length = 428
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ M F G NILVATD++ GIDI LVI +D P + YV
Sbjct: 285 EVMYEFKAGRINILVATDIVARGIDIDDIRLVINYDVPHDSEDYVH 330
>gi|156976352|ref|YP_001447258.1| ATP-dependent RNA helicase [Vibrio harveyi ATCC BAA-1116]
gi|156527946|gb|ABU73031.1| hypothetical protein VIBHAR_05125 [Vibrio harveyi ATCC BAA-1116]
Length = 447
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI + VI FD P+HT YV
Sbjct: 293 MSQFERAVFKILVTTDVASRGLDIATVTHVINFDMPKHTEEYVH 336
>gi|254228728|ref|ZP_04922151.1| dead/deah box helicase domain protein [Vibrio sp. Ex25]
gi|262396550|ref|YP_003288403.1| ATP-dependent RNA helicase [Vibrio sp. Ex25]
gi|151938675|gb|EDN57510.1| dead/deah box helicase domain protein [Vibrio sp. Ex25]
gi|262340144|gb|ACY53938.1| ATP-dependent RNA helicase [Vibrio sp. Ex25]
Length = 443
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI + VI FD P+HT YV
Sbjct: 289 MSQFERAVFKILVTTDVASRGLDIATVTHVINFDMPKHTEEYVH 332
>gi|150391484|ref|YP_001321533.1| DEAD/DEAH box helicase [Alkaliphilus metalliredigens QYMF]
gi|149951346|gb|ABR49874.1| DEAD/DEAH box helicase domain protein [Alkaliphilus metalliredigens
QYMF]
Length = 484
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
V+ M F +G LVATDV GIDI + +LVI +D PQ SYV
Sbjct: 282 VRVMNEFKQGYFRYLVATDVAARGIDIDNISLVINYDIPQDKESYVH 328
>gi|126179703|ref|YP_001047668.1| DEAD/DEAH box helicase domain-containing protein [Methanoculleus
marisnigri JR1]
gi|125862497|gb|ABN57686.1| DEAD/DEAH box helicase domain protein [Methanoculleus marisnigri
JR1]
Length = 527
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F G +ILVATDV GID++ +LVI +D PQ Y+
Sbjct: 287 MAKFRAGSIDILVATDVAARGIDVEDVDLVINYDVPQDIEYYIH 330
>gi|410076008|ref|XP_003955586.1| hypothetical protein KAFR_0B01520 [Kazachstania africana CBS 2517]
gi|372462169|emb|CCF56451.1| hypothetical protein KAFR_0B01520 [Kazachstania africana CBS 2517]
Length = 496
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV--VRHKAEQ 62
T F ILV TDV G+DI + + +I+FDPP R Y+ T + K +
Sbjct: 323 TFFEFCNAERGILVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKGKGKS 382
Query: 63 ILSQYPKSERYLQY 76
++ P +L+Y
Sbjct: 383 LMFLAPSELGFLRY 396
>gi|375263823|ref|YP_005026053.1| DEAD-box ATP dependent DNA helicase [Vibrio sp. EJY3]
gi|369844250|gb|AEX25078.1| DEAD-box ATP dependent DNA helicase [Vibrio sp. EJY3]
Length = 447
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI + VI FD P+HT YV
Sbjct: 293 MSQFERAVFKILVTTDVASRGLDIATVTHVINFDMPKHTEEYVH 336
>gi|338210794|ref|YP_004654843.1| DEAD/DEAH box helicase [Runella slithyformis DSM 19594]
gi|336304609|gb|AEI47711.1| DEAD/DEAH box helicase domain protein [Runella slithyformis DSM
19594]
Length = 570
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 32/70 (45%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
Q M F G NILVATDV GID+ + VI FD P YV T +
Sbjct: 283 QVMAKFRSGAANILVATDVAARGIDVSGIDAVINFDLPLDEEYYVHRIGRTGRAGLTGKA 342
Query: 64 LSQYPKSERY 73
L+ K E+Y
Sbjct: 343 LTLVAKDEKY 352
>gi|218709165|ref|YP_002416786.1| ATP-dependent RNA helicase [Vibrio splendidus LGP32]
gi|218322184|emb|CAV18298.1| putative ATP-dependent RNA helicase [Vibrio splendidus LGP32]
Length = 418
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
Q + SF G T +L+ATDV+ GI I +VI FD P H+ +YV
Sbjct: 285 QALESFKNGKTRVLIATDVMARGIHIDQLPVVINFDLPSHSATYVH 330
>gi|195439780|ref|XP_002067737.1| GK12550 [Drosophila willistoni]
gi|194163822|gb|EDW78723.1| GK12550 [Drosophila willistoni]
Length = 800
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
+ SF G +ILVATDV G+D+ VI +D P ++ YV T + +
Sbjct: 424 LSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYT 483
Query: 66 QYPKSERYLQYNSPKINRLLQLLRRYN 92
+ S N+ K N L+Q+LR N
Sbjct: 484 LFTHS------NANKANDLIQVLREAN 504
>gi|153831607|ref|ZP_01984274.1| ATP-dependent rna helicase, dead box family [Vibrio harveyi HY01]
gi|148872117|gb|EDL70934.1| ATP-dependent rna helicase, dead box family [Vibrio harveyi HY01]
Length = 443
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI + VI FD P+HT YV
Sbjct: 289 MSQFERAVFKILVTTDVASRGLDIATVTHVINFDMPKHTEEYVH 332
>gi|124513404|ref|XP_001350058.1| ATP-dependent RNA Helicase, putative [Plasmodium falciparum 3D7]
gi|23615475|emb|CAD52466.1| ATP-dependent RNA Helicase, putative [Plasmodium falciparum 3D7]
gi|117956288|gb|ABK58712.1| SF2-family helicase [Plasmodium falciparum]
Length = 490
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
T+ F G+ ILVATD++ GIDI + VI FD P T Y+
Sbjct: 360 TLAKFKNGLCKILVATDIISRGIDIPKISFVINFDFPNDTVQYIH 404
>gi|449439479|ref|XP_004137513.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like [Cucumis
sativus]
Length = 608
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV--VRHKAEQ 62
T +FN+ IL+ TDV G+DI + + ++++DPP + Y+ T K
Sbjct: 409 TFFAFNKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGEGSKGNA 468
Query: 63 ILSQYPKSERYLQY 76
+L P+ ++L+Y
Sbjct: 469 LLFLIPEELQFLRY 482
>gi|297833724|ref|XP_002884744.1| hypothetical protein ARALYDRAFT_317764 [Arabidopsis lyrata subsp.
lyrata]
gi|297330584|gb|EFH61003.1| hypothetical protein ARALYDRAFT_317764 [Arabidopsis lyrata subsp.
lyrata]
Length = 930
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+++ F + N+L+AT V G+D++ LV+ FDPP H YV
Sbjct: 596 KSLSEFKNNVCNLLIATSVAARGLDVKELELVVNFDPPNHYEDYVH 641
>gi|403350666|gb|EJY74800.1| DEAD/DEAH box helicase family protein [Oxytricha trifallax]
Length = 795
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQIL 64
T+ F ++LVATDV G+DI + +LVI+ +PP SY+ T + +
Sbjct: 393 TLKRFKENKFSVLVATDVASRGLDIPNVDLVIQVEPPNDVESYIHRAGRTARAGRTGTCI 452
Query: 65 SQYPKSERYL 74
+ Y K +Y+
Sbjct: 453 TFYGKKHQYM 462
>gi|338727802|ref|XP_001915471.2| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX55-like [Equus caballus]
Length = 628
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + F + + ILV TDV+ GIDI N V+++DPP + ++V T + H
Sbjct: 309 KIFMEFRKLPSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 63 ILSQYPKSERYLQY 76
++ P E Y+ +
Sbjct: 369 LVFLLPMEESYINF 382
>gi|237838969|ref|XP_002368782.1| helicase, putative [Toxoplasma gondii ME49]
gi|211966446|gb|EEB01642.1| helicase, putative [Toxoplasma gondii ME49]
Length = 2729
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 16 ILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
+LV+T VLEEGID+ +CNLV++ D P +VQ+K
Sbjct: 1832 LLVSTSVLEEGIDVPACNLVVQMDMPSSLVRFVQAKG 1868
>gi|198463474|ref|XP_002135506.1| GA28589 [Drosophila pseudoobscura pseudoobscura]
gi|198151271|gb|EDY74133.1| GA28589 [Drosophila pseudoobscura pseudoobscura]
Length = 799
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
+ SF G +ILVATDV G+D+ VI +D P ++ YV T + +
Sbjct: 432 LSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYT 491
Query: 66 QYPKSERYLQYNSPKINRLLQLLRRYN 92
+ S N+ K N L+Q+LR N
Sbjct: 492 LFTHS------NANKANDLIQVLREAN 512
>gi|167624613|ref|YP_001674907.1| DEAD/DEAH box helicase [Shewanella halifaxensis HAW-EB4]
gi|167354635|gb|ABZ77248.1| DEAD/DEAH box helicase domain protein [Shewanella halifaxensis
HAW-EB4]
Length = 458
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
Q M F+RG+ ILV TDV G+D+ + +LVI FD P+ YV
Sbjct: 297 QIMDEFSRGLQQILVTTDVASRGLDLLNVSLVINFDMPKFAEEYVH 342
>gi|153835973|ref|ZP_01988640.1| ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus AQ3810]
gi|308094943|ref|ZP_05892523.2| ATP-dependent RNA helicase, DEAD-box family [Vibrio
parahaemolyticus AN-5034]
gi|308095142|ref|ZP_05903781.2| ATP-dependent RNA helicase, DEAD-box family [Vibrio
parahaemolyticus Peru-466]
gi|308125529|ref|ZP_05775749.2| ATP-dependent RNA helicase, DEAD-box family [Vibrio
parahaemolyticus K5030]
gi|433660511|ref|YP_007301370.1| ATP-dependent RNA helicase [Vibrio parahaemolyticus BB22OP]
gi|149750727|gb|EDM61472.1| ATP-dependent RNA helicase RhlE [Vibrio parahaemolyticus AQ3810]
gi|308085569|gb|EFO35264.1| ATP-dependent RNA helicase, DEAD-box family [Vibrio
parahaemolyticus Peru-466]
gi|308092338|gb|EFO42033.1| ATP-dependent RNA helicase, DEAD-box family [Vibrio
parahaemolyticus AN-5034]
gi|308112170|gb|EFO49710.1| ATP-dependent RNA helicase, DEAD-box family [Vibrio
parahaemolyticus K5030]
gi|432511898|gb|AGB12715.1| ATP-dependent RNA helicase [Vibrio parahaemolyticus BB22OP]
Length = 444
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI + VI FD P+HT YV
Sbjct: 289 MSQFERAVFKILVTTDVASRGLDIATVTHVINFDMPKHTEEYVH 332
>gi|403414414|emb|CCM01114.1| predicted protein [Fibroporia radiculosa]
Length = 960
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 26/46 (56%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
Q M F RG TNILV TDV GIDI V+ +D PQ R +V
Sbjct: 439 QQMDQFRRGRTNILVVTDVAARGIDIPVLENVVNYDFPQGARVFVH 484
>gi|170099199|ref|XP_001880818.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644343|gb|EDR08593.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 449
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G + ILVATDV G+D+ + ++VI +D P H++ Y+ T +A + +
Sbjct: 299 FKSGKSRILVATDVASRGLDVPNVDVVINYDVPTHSKDYIHRVGRTARAGRAGKSILMVT 358
Query: 69 KSERYLQYNSPKINRLLQLLRR----YNPDQRTIIFCQRR 104
QY++ + RL ++L R Y D + I + R
Sbjct: 359 ------QYDAELMLRLEKVLNRKLDLYPTDLQEIALLKER 392
>gi|162148769|ref|YP_001603230.1| ATP-dependent RNA helicase rhlE [Gluconacetobacter diazotrophicus
PAl 5]
gi|161787346|emb|CAP56941.1| putative ATP-dependent RNA helicase rhlE [Gluconacetobacter
diazotrophicus PAl 5]
Length = 390
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+T+ F RG +LVATDV+ GID++ LV+ FD P+ +Y+ T +
Sbjct: 302 RTLDDFRRGRLLVLVATDVMARGIDVEGVALVVNFDIPEQPETYIHRIGRTARAGRRGTA 361
Query: 64 LSQYPKSER 72
LS +ER
Sbjct: 362 LSLCDPAER 370
>gi|387592816|gb|EIJ87840.1| RNA helicase [Nematocida parisii ERTm3]
gi|387595437|gb|EIJ93061.1| RNA helicase [Nematocida parisii ERTm1]
Length = 495
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 10 NRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
++G ILV+TD++ GID+ S N+VI FD PQ T SY+
Sbjct: 412 SKGECRILVSTDLVTRGIDVPSVNVVINFDLPQSTESYLH 451
>gi|295106692|emb|CBL04235.1| Superfamily II DNA and RNA helicases [Gordonibacter pamelaeae
7-10-1-b]
Length = 530
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ + +F RG T+ILVATDVL GID+ + VI FD P YV
Sbjct: 284 RALENFRRGKTSILVATDVLARGIDVPDVDHVINFDLPDMPEDYVH 329
>gi|209545470|ref|YP_002277699.1| DEAD/DEAH box helicase [Gluconacetobacter diazotrophicus PAl 5]
gi|209533147|gb|ACI53084.1| DEAD/DEAH box helicase domain protein [Gluconacetobacter
diazotrophicus PAl 5]
Length = 390
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+T+ F RG +LVATDV+ GID++ LV+ FD P+ +Y+ T +
Sbjct: 302 RTLDDFRRGRLLVLVATDVMARGIDVEDVALVVNFDIPEQPETYIHRIGRTARAGRRGTA 361
Query: 64 LSQYPKSER 72
LS +ER
Sbjct: 362 LSLCDPAER 370
>gi|114050983|ref|NP_001039472.1| ATP-dependent RNA helicase DDX55 [Bos taurus]
gi|115502143|sp|Q2NL08.1|DDX55_BOVIN RecName: Full=ATP-dependent RNA helicase DDX55; AltName: Full=DEAD
box protein 55
gi|84708796|gb|AAI11256.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Bos taurus]
Length = 601
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + F + + ILV TDV+ GIDI N V+++DPP + ++V T + H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 63 ILSQYPKSERYLQY 76
++ P E Y+ +
Sbjct: 369 LVFLLPMEESYISF 382
>gi|74654532|sp|Q9Y7C4.1|ROK1_CANAL RecName: Full=ATP-dependent RNA helicase CHR1
gi|4589366|gb|AAD26468.1| DEAD box RNA helicase [Candida albicans]
Length = 578
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQYP 68
F G +L+ TDVL G+D + NLVI +D PQ ++YV T KA + ++ +
Sbjct: 424 FKNGDIWVLITTDVLARGVDFKGVNLVINYDVPQSAQAYVHRIGRTGRGGKAGKAVTFFT 483
Query: 69 KSE 71
K +
Sbjct: 484 KED 486
>gi|406356429|gb|AFS34611.1| melanoma differentiation-associated protein 5 [Ictalurus punctatus]
Length = 1005
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA--------FTV 55
+ + F G+ N+L+AT V EEG+DI+ CN+VI++ + + +Q++ +TV
Sbjct: 748 EVLKKFRDGVINLLIATTVAEEGLDIKECNIVIRYCLVTNEIAMIQARGRGRAEDSSYTV 807
Query: 56 VRHKAEQILSQYPKSERYLQYNSPKINRLLQLLRR 90
V + + +E + S I R+ L R
Sbjct: 808 VEEAGSGVAERESVNEYREKMMSKAIARVCTLSRE 842
>gi|66812114|ref|XP_640236.1| hypothetical protein DDB_G0282741 [Dictyostelium discoideum AX4]
gi|74897113|sp|Q54S03.1|DDX18_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx18; AltName:
Full=DEAD box protein 18
gi|60468220|gb|EAL66230.1| hypothetical protein DDB_G0282741 [Dictyostelium discoideum AX4]
Length = 602
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV--VRHKAEQ 62
T F IL+ TDV G+DI S + +I++DPP + Y+ T V K
Sbjct: 407 TFYEFVNAEKGILICTDVAARGLDIPSVDWIIQYDPPDDPKEYIHRVGRTARGVGKKGRA 466
Query: 63 ILSQYPKSERYLQY 76
+L PK +L+Y
Sbjct: 467 LLFLLPKELGFLKY 480
>gi|301093251|ref|XP_002997474.1| ATP-dependent RNA helicase, putative [Phytophthora infestans T30-4]
gi|262110730|gb|EEY68782.1| ATP-dependent RNA helicase, putative [Phytophthora infestans T30-4]
Length = 489
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV--VRHKAEQ 62
T F T IL+ TDV G+DI + + +I+FDPP R Y+ T + K +
Sbjct: 393 TFFQFCNAKTGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGAKGKGKA 452
Query: 63 ILSQYPKSERYLQY 76
+L P +L+Y
Sbjct: 453 LLMLLPDELGFLKY 466
>gi|326201867|ref|ZP_08191737.1| DEAD/DEAH box helicase domain protein [Clostridium papyrosolvens
DSM 2782]
gi|325987662|gb|EGD48488.1| DEAD/DEAH box helicase domain protein [Clostridium papyrosolvens
DSM 2782]
Length = 481
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
++ M F RG L+ATDV GIDI + +LVI +D PQ +YV T + +
Sbjct: 281 LKVMNDFKRGYFRYLIATDVAARGIDIDNISLVINYDIPQDGETYVHRIGRTGRIGRDGK 340
Query: 63 ILSQYPKSE-RYLQYNSPKINRLLQLLRRYNPDQRTI 98
+S + E +YL + I + +++ + PD+ T+
Sbjct: 341 AISFVTEDESKYLNDINQYIGK--EIILKEKPDRETV 375
>gi|426374586|ref|XP_004054151.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Gorilla gorilla
gorilla]
Length = 600
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + F + + ILV TDV+ GIDI N V+++DPP + ++V T + H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 63 ILSQYPKSERYLQY 76
++ P E Y+ +
Sbjct: 369 LVFLLPMEESYINF 382
>gi|397481832|ref|XP_003812141.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Pan paniscus]
Length = 600
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + F + + ILV TDV+ GIDI N V+++DPP + ++V T + H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 63 ILSQYPKSERYLQY 76
++ P E Y+ +
Sbjct: 369 LVFLLPMEESYINF 382
>gi|355564806|gb|EHH21306.1| hypothetical protein EGK_04327 [Macaca mulatta]
gi|383412655|gb|AFH29541.1| ATP-dependent RNA helicase DDX55 [Macaca mulatta]
Length = 600
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + F + + ILV TDV+ GIDI N V+++DPP + ++V T + H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 63 ILSQYPKSERYLQY 76
++ P E Y+ +
Sbjct: 369 LVFLLPMEESYINF 382
>gi|344297284|ref|XP_003420329.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Loxodonta africana]
Length = 599
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + F + + ILV TDV+ GIDI N V+++DPP + ++V T + H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 63 ILSQYPKSERYLQY 76
++ P E Y+ +
Sbjct: 369 LVFLLPMEESYVSF 382
>gi|332254329|ref|XP_003276279.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Nomascus leucogenys]
Length = 599
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + F + + ILV TDV+ GIDI N V+++DPP + ++V T + H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 63 ILSQYPKSERYLQY 76
++ P E Y+ +
Sbjct: 369 LVFLLPMEESYINF 382
>gi|310798327|gb|EFQ33220.1| RNase3 domain-containing protein [Glomerella graminicola M1.001]
Length = 1532
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
V T+ F N L AT V EEG+DI CNL+++FD + Y+QSK
Sbjct: 506 VLTIHRFRHAEVNCLFATQVAEEGLDIPDCNLIMRFDLYKSVIQYIQSKG 555
>gi|229493625|ref|ZP_04387410.1| ATP-dependent RNA helicase RhlE [Rhodococcus erythropolis SK121]
gi|453069698|ref|ZP_21972952.1| ATP-dependent RNA helicase [Rhodococcus qingshengii BKS 20-40]
gi|226185704|dbj|BAH33808.1| putative ATP-dependent RNA helicase [Rhodococcus erythropolis PR4]
gi|229319586|gb|EEN85422.1| ATP-dependent RNA helicase RhlE [Rhodococcus erythropolis SK121]
gi|452762646|gb|EME20940.1| ATP-dependent RNA helicase [Rhodococcus qingshengii BKS 20-40]
Length = 500
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+T+ SF+ G T +LVATDV GI + LV+ DPP + Y+ T ++ +
Sbjct: 295 KTLASFSDGTTPVLVATDVAARGIHVDDVTLVVHVDPPAEAKDYLHRAGRTARAGESGVV 354
Query: 64 LSQYPKSER 72
++ ER
Sbjct: 355 VTIVTDEER 363
>gi|114764595|ref|ZP_01443799.1| ATP-dependent RNA helicase RhlE [Pelagibaca bermudensis HTCC2601]
gi|114542971|gb|EAU45991.1| ATP-dependent RNA helicase RhlE [Roseovarius sp. HTCC2601]
Length = 502
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 14/89 (15%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV-----------QSKA 52
+T+ F G +L+A+DV G+D+ S + V FD P H YV + KA
Sbjct: 293 RTLEGFREGSIRLLIASDVAARGLDVPSVSHVFNFDVPGHAEDYVHRIGRTGRAGREGKA 352
Query: 53 FTVVRHKAEQILSQYPKSERYLQYNSPKI 81
FT+V + E+ + E+ LQ P++
Sbjct: 353 FTIVVPRDEK---NFEDVEKLLQKEIPRV 378
>gi|119775874|ref|YP_928614.1| ATP-dependent RNA helicase SrmB [Shewanella amazonensis SB2B]
gi|119768374|gb|ABM00945.1| superfamily II DNA and RNA helicase-like protein [Shewanella
amazonensis SB2B]
Length = 613
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV-----------QSKA 52
Q + F +G N+L+ATDV GIDI+ VI FD P+ +YV + A
Sbjct: 286 QALGRFTKGEVNVLLATDVAARGIDIEDITHVINFDMPRSADTYVHRIGRTGRAGAKGTA 345
Query: 53 FTVVRHKAEQILSQYPKSERYLQYNSPKINRLLQLLR 89
++V +IL K ERY++ P R+++ LR
Sbjct: 346 ISLVEAHDMRILG---KVERYIE--QPLKRRVIEELR 377
>gi|332532397|ref|ZP_08408275.1| cold-shock DEAD-box protein A [Pseudoalteromonas haloplanktis
ANT/505]
gi|332038040|gb|EGI74487.1| cold-shock DEAD-box protein A [Pseudoalteromonas haloplanktis
ANT/505]
Length = 592
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+T+ G+ NI++ATDV G+D+ +LVI +D PQ + +YV T + +
Sbjct: 262 RTVDRLKSGMLNIVIATDVAARGLDVDRLSLVINYDIPQDSEAYVHRIGRTGRAGRTGKA 321
Query: 64 LSQYPKSERYLQYN 77
+ +ERYL N
Sbjct: 322 ILFVKHNERYLLKN 335
>gi|317480121|ref|ZP_07939231.1| DEAD/DEAH box helicase [Bacteroides sp. 4_1_36]
gi|316903668|gb|EFV25512.1| DEAD/DEAH box helicase [Bacteroides sp. 4_1_36]
Length = 405
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ M F G NILVATD++ GIDI LVI +D P + YV
Sbjct: 262 EVMYEFKAGRINILVATDIVARGIDIDDIRLVINYDVPHDSEDYVH 307
>gi|392373513|ref|YP_003205346.1| ATP-dependent RNA helicase with P-loop hydrolase domain (rhlE gene)
[Candidatus Methylomirabilis oxyfera]
gi|258591206|emb|CBE67503.1| Putative ATP-dependent RNA helicase with P-loop hydrolase domain
(rhlE gene) [Candidatus Methylomirabilis oxyfera]
Length = 479
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ + SF RG +LVATD+ GID+++ LV+ FD PQ Y+
Sbjct: 281 EALASFKRGRCRVLVATDIAARGIDVEALGLVVNFDVPQLPEDYIH 326
>gi|194865632|ref|XP_001971526.1| GG15018 [Drosophila erecta]
gi|190653309|gb|EDV50552.1| GG15018 [Drosophila erecta]
Length = 824
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
+ SF G +ILVATDV G+D+ VI +D P ++ YV T + +
Sbjct: 447 LSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYT 506
Query: 66 QYPKSERYLQYNSPKINRLLQLLRRYN 92
+ S N+ K N L+Q+LR N
Sbjct: 507 LFTHS------NANKANDLIQVLREAN 527
>gi|157962445|ref|YP_001502479.1| DEAD/DEAH box helicase [Shewanella pealeana ATCC 700345]
gi|157847445|gb|ABV87944.1| DEAD/DEAH box helicase domain protein [Shewanella pealeana ATCC
700345]
Length = 448
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
Q M F+RG+ ILV TDV G+D+ + +LVI FD P+ YV
Sbjct: 287 QIMDEFSRGLQQILVTTDVASRGLDLLNVSLVINFDMPKFAEEYVH 332
>gi|28901323|ref|NP_800978.1| DEAD-box ATP dependent DNA helicase [Vibrio parahaemolyticus RIMD
2210633]
gi|417323065|ref|ZP_12109595.1| DEAD-box ATP dependent DNA helicase [Vibrio parahaemolyticus 10329]
gi|28809870|dbj|BAC62811.1| ATP-dependent RNA helicase, DEAD box family [Vibrio
parahaemolyticus RIMD 2210633]
gi|328469261|gb|EGF40207.1| DEAD-box ATP dependent DNA helicase [Vibrio parahaemolyticus 10329]
Length = 448
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI + VI FD P+HT YV
Sbjct: 293 MSQFERAVFKILVTTDVASRGLDIATVTHVINFDMPKHTEEYVH 336
>gi|388599353|ref|ZP_10157749.1| ATP-dependent RNA helicase [Vibrio campbellii DS40M4]
Length = 447
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI + VI FD P+HT YV
Sbjct: 293 MSQFERAVFKILVTTDVASRGLDIATVTHVINFDMPKHTEEYVH 336
>gi|343087372|ref|YP_004776667.1| DEAD/DEAH box helicase [Cyclobacterium marinum DSM 745]
gi|342355906|gb|AEL28436.1| DEAD/DEAH box helicase domain protein [Cyclobacterium marinum DSM
745]
Length = 450
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 35/74 (47%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+ M +F ILVATD+L GID++ LVI FD P YV T K +
Sbjct: 282 KIMSAFKNKSLKILVATDILSRGIDVEDIELVINFDSPNDPEDYVHRVGRTARAEKKGKA 341
Query: 64 LSQYPKSERYLQYN 77
++ + +RY N
Sbjct: 342 VTFVNEKDRYKYRN 355
>gi|331214536|ref|XP_003319949.1| hypothetical protein PGTG_00861 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309298939|gb|EFP75530.1| hypothetical protein PGTG_00861 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1329
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFT-VVRHKAEQ 62
Q + F G+T I++AT V G+D++ LVI +D P H YV T +K
Sbjct: 941 QVIADFKSGVTPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTC 1000
Query: 63 ILSQYPKSERY 73
I P ERY
Sbjct: 1001 ITFIAPDQERY 1011
>gi|296478480|tpg|DAA20595.1| TPA: ATP-dependent RNA helicase DDX55 [Bos taurus]
Length = 601
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + F + + ILV TDV+ GIDI N V+++DPP + ++V T + H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 63 ILSQYPKSERYLQY 76
++ P E Y+ +
Sbjct: 369 LVFLLPMEESYISF 382
>gi|226499134|ref|NP_001147316.1| ATP-dependent rRNA helicase spb4 [Zea mays]
gi|195609842|gb|ACG26751.1| ATP-dependent rRNA helicase spb4 [Zea mays]
Length = 641
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + SF+ + +LV TDV G+DI S +L++++DPPQ ++ T + +
Sbjct: 325 KALASFSALSSGVLVCTDVAARGLDIPSVDLIVQYDPPQDPNVFIHRAGRTARYDQEGDA 384
Query: 63 ILSQYPKSERYLQY 76
I+ PK + Y+++
Sbjct: 385 IVFLLPKEDTYVEF 398
>gi|194214438|ref|XP_001915702.1| PREDICTED: ATP-dependent RNA helicase DDX51 [Equus caballus]
Length = 550
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
F +G +L++TD + GID+Q LV+ +D PQ+ R+YV T K Q +
Sbjct: 435 FEQGKIQLLISTDAMARGIDVQGVQLVVNYDAPQYLRTYVHRVGRTARAGKTGQAFT 491
>gi|114647685|ref|XP_001170267.1| PREDICTED: ATP-dependent RNA helicase DDX55 isoform 8 [Pan
troglodytes]
gi|410214454|gb|JAA04446.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
gi|410214456|gb|JAA04447.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
gi|410214458|gb|JAA04448.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
gi|410252672|gb|JAA14303.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
gi|410252674|gb|JAA14304.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
gi|410306148|gb|JAA31674.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
gi|410330307|gb|JAA34100.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
gi|410330309|gb|JAA34101.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
Length = 600
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + F + + ILV TDV+ GIDI N V+++DPP + ++V T + H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 63 ILSQYPKSERYLQY 76
++ P E Y+ +
Sbjct: 369 LVFLLPMEESYINF 382
>gi|282878371|ref|ZP_06287163.1| putative ATP-dependent RNA helicase DeaD [Prevotella buccalis ATCC
35310]
gi|281299557|gb|EFA91934.1| putative ATP-dependent RNA helicase DeaD [Prevotella buccalis ATCC
35310]
Length = 558
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV 48
+ M F G ++LVATD+L GIDI +VI +D P YV
Sbjct: 286 EVMFQFKSGQIDVLVATDILSRGIDIDDIAMVINYDVPHDAEDYV 330
>gi|336373869|gb|EGO02207.1| hypothetical protein SERLA73DRAFT_178026 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386778|gb|EGO27924.1| hypothetical protein SERLADRAFT_462194 [Serpula lacrymans var.
lacrymans S7.9]
Length = 449
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
+ F G ILVATDV G+DI S ++VI FD P H++ Y+
Sbjct: 297 LAKFKSGGRKILVATDVASRGLDIPSVDIVINFDIPTHSKDYIH 340
>gi|162451805|ref|YP_001614172.1| hypothetical protein sce3532 [Sorangium cellulosum So ce56]
gi|161162387|emb|CAN93692.1| deaD2 [Sorangium cellulosum So ce56]
Length = 478
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+ + SF +G T++LVATD+ GIDI + VI +D P SYV T R A +
Sbjct: 284 RALASFKQGTTSVLVATDIAARGIDIDDISHVINYDLPNIPESYVHRIGRT-ARAGASGV 342
Query: 64 LSQYPKSER--YLQYNSPKINRLLQ 86
+ SE YL I RL+Q
Sbjct: 343 ALSFCDSEERAYLA----DIERLIQ 363
>gi|410981129|ref|XP_003996925.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 [Felis catus]
Length = 667
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 9 FNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKA 52
F GI N+LVAT V EEG+DI CN+V+++ + S VQ++
Sbjct: 416 FRAGILNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQARG 459
>gi|357616174|gb|EHJ70052.1| hypothetical protein KGM_09326 [Danaus plexippus]
Length = 1249
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 15 NILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYV 48
N+L+AT VLEEGID+ CNLV+++D P RS+
Sbjct: 394 NLLLATSVLEEGIDLPRCNLVVRWDLPPSYRSHA 427
>gi|297263808|ref|XP_002798866.1| PREDICTED: ATP-dependent RNA helicase DDX55-like isoform 2 [Macaca
mulatta]
Length = 600
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + F + + ILV TDV+ GIDI N V+++DPP + ++V T + H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 63 ILSQYPKSERYLQY 76
++ P E Y+ +
Sbjct: 369 LVFLLPMEESYINF 382
>gi|296184919|ref|ZP_06853330.1| DEAD/DEAH box helicase [Clostridium carboxidivorans P7]
gi|296050701|gb|EFG90124.1| DEAD/DEAH box helicase [Clostridium carboxidivorans P7]
Length = 374
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Query: 3 VQTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQ 62
+ T+ F G + LVATDV GID+ + VI +D PQ SYV T R E
Sbjct: 282 LNTLRKFKEGTLDFLVATDVAARGIDVDDVSHVINYDLPQDMESYVHRIGRT-GRANKEG 340
Query: 63 ILSQYPKSERYLQYNSPKINRLLQLLRRYNPDQRTIIF 100
I Y+ I +L + +R N ++R F
Sbjct: 341 IAYSLVTPREYIM-----IKQLEKFTKRQNKEKRNTYF 373
>gi|195588318|ref|XP_002083905.1| GD13105 [Drosophila simulans]
gi|194195914|gb|EDX09490.1| GD13105 [Drosophila simulans]
Length = 814
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILSQY 67
SF G +ILVATDV G+D+ VI +D P ++ YV T + + +
Sbjct: 446 SFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLF 505
Query: 68 PKSERYLQYNSPKINRLLQLLRRYN 92
S N+ K N L+Q+LR N
Sbjct: 506 THS------NANKANDLIQVLREAN 524
>gi|156841974|ref|XP_001644357.1| hypothetical protein Kpol_513p15 [Vanderwaltozyma polyspora DSM
70294]
gi|156114998|gb|EDO16499.1| hypothetical protein Kpol_513p15 [Vanderwaltozyma polyspora DSM
70294]
Length = 501
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 5 TMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV--VRHKAEQ 62
T F ILV TDV G+DI + + +I+FDPP R Y+ T + K +
Sbjct: 326 TFFEFCNAERGILVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKGKGKS 385
Query: 63 ILSQYPKSERYLQY 76
++ P +L+Y
Sbjct: 386 LMFLTPNELGFLRY 399
>gi|444428260|ref|ZP_21223602.1| ATP-dependent RNA helicase [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444238494|gb|ELU50097.1| ATP-dependent RNA helicase [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 447
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
M F R + ILV TDV G+DI + VI FD P+HT YV
Sbjct: 293 MSQFERAVFKILVTTDVASRGLDIATVTHVINFDMPKHTEEYVH 336
>gi|41327779|ref|NP_065987.1| ATP-dependent RNA helicase DDX55 [Homo sapiens]
gi|296439376|sp|Q8NHQ9.3|DDX55_HUMAN RecName: Full=ATP-dependent RNA helicase DDX55; AltName: Full=DEAD
box protein 55
gi|119618827|gb|EAW98421.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55, isoform CRA_c [Homo
sapiens]
gi|119618828|gb|EAW98422.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55, isoform CRA_c [Homo
sapiens]
Length = 600
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + F + + ILV TDV+ GIDI N V+++DPP + ++V T + H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 63 ILSQYPKSERYLQY 76
++ P E Y+ +
Sbjct: 369 LVFLLPMEESYINF 382
>gi|405945237|gb|EKC17229.1| Eukaryotic initiation factor 4A-8 [Crassostrea gigas]
Length = 446
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 8 SFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQ 49
SF G + +L++TD+L GID+Q +LVI FD P SY+
Sbjct: 357 SFRTGSSRVLISTDLLSRGIDVQQVSLVINFDLPMERESYIH 398
>gi|359455684|ref|ZP_09244895.1| ATP-dependent RNA helicase DeaD [Pseudoalteromonas sp. BSi20495]
gi|414072865|ref|ZP_11408780.1| ATP-dependent RNA helicase DeaD [Pseudoalteromonas sp. Bsw20308]
gi|358047307|dbj|GAA81144.1| ATP-dependent RNA helicase DeaD [Pseudoalteromonas sp. BSi20495]
gi|410804718|gb|EKS10768.1| ATP-dependent RNA helicase DeaD [Pseudoalteromonas sp. Bsw20308]
Length = 614
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQI 63
+T+ G+ NI++ATDV G+D+ +LVI +D PQ + +YV T + +
Sbjct: 284 RTVDRLKSGMLNIVIATDVAARGLDVDRLSLVINYDIPQDSEAYVHRIGRTGRAGRTGKA 343
Query: 64 LSQYPKSERYLQYN 77
+ +ERYL N
Sbjct: 344 ILFVKHNERYLLKN 357
>gi|195492387|ref|XP_002093968.1| GE20460 [Drosophila yakuba]
gi|194180069|gb|EDW93680.1| GE20460 [Drosophila yakuba]
Length = 818
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
+ SF G +ILVATDV G+D+ VI +D P ++ YV T + +
Sbjct: 446 LSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYT 505
Query: 66 QYPKSERYLQYNSPKINRLLQLLRRYN 92
+ S N+ K N L+Q+LR N
Sbjct: 506 LFTHS------NANKANDLIQVLREAN 526
>gi|195376137|ref|XP_002046853.1| GJ12262 [Drosophila virilis]
gi|194154011|gb|EDW69195.1| GJ12262 [Drosophila virilis]
Length = 778
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 6 MLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTVVRHKAEQILS 65
+ SF G +ILVATDV G+D+ VI +D P ++ YV T + +
Sbjct: 432 LSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYT 491
Query: 66 QYPKSERYLQYNSPKINRLLQLLRRYN 92
+ S N+ K N L+Q+LR N
Sbjct: 492 LFTNS------NANKANDLIQVLREAN 512
>gi|20987604|gb|AAH30020.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Homo sapiens]
Length = 600
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 4 QTMLSFNRGITNILVATDVLEEGIDIQSCNLVIKFDPPQHTRSYVQSKAFTV-VRHKAEQ 62
+ + F + + ILV TDV+ GIDI N V+++DPP + ++V T + H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 63 ILSQYPKSERYLQY 76
++ P E Y+ +
Sbjct: 369 LVFLLPMEESYINF 382
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.137 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,521,468,560
Number of Sequences: 23463169
Number of extensions: 50210416
Number of successful extensions: 231850
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 15995
Number of HSP's successfully gapped in prelim test: 776
Number of HSP's that attempted gapping in prelim test: 214768
Number of HSP's gapped (non-prelim): 17828
length of query: 109
length of database: 8,064,228,071
effective HSP length: 77
effective length of query: 32
effective length of database: 6,257,564,058
effective search space: 200242049856
effective search space used: 200242049856
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 69 (31.2 bits)