Diaphorina citri psyllid: psy16584

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200--
MDNPNEHGGRIRSFPHQRNSWATLVYIPLQTNLARLYAMLKEELNSVGISVEVIPEPHLSLSKTLVIPYHWIDTLVETLGNNLRHLNRLTIKFNSIEIFCNEEKTRSFIALGANSCKTSLTSIVQAVDKSAQEFKLPTYYEEPNFHASIAWCLQDKTATLKPLLTKLDNIFTQFKLTSDESFHVVTHIHMKTGNKFYSFPLT
cccccccccccccccccccccccEEEEcccccHHHHHHHHHHHHHHcccccccccccEEEcccccccccccHHHHHHHHHHHHccccEEEEEEccEEEEEcccccEEEEEEEEcccccHHHHHHHHHHHHHHHccccccccccccEEEEccccccccccHHHHHHHHHHHHHHccccccccEEEEcEEEEEEccEEEEECcc
******H*GRIRSFPHQRNSWATLVYIPLQTNLARLYAMLKEELNSVGISVEVIPEPHLSLSKTLVIPYHWIDTLVETLGNNLRHLNRLTIKFNSIEIFCNEEKTRSFIALGANSCKTSLTSIVQAVDKSAQEFKLPTYYEEPNFHASIAWCLQDKTATLKPLLTKLDNIFTQFKLTSDESFHVVTHIHMKTGNKFYSFPLT
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MDNPNEHGGRIRSFPHQRNSWATLVYIPLQTNLARLYAMLKEELNSVGISVEVIPEPHLSLSKTLVIPYHWIDTLVETLGNNLRHLNRLTIKFNSIEIFCNEEKTRSFIALGANSCKTSLTSIVQAVDKSAQEFKLPTYYEEPNFHASIAWCLQDKTATLKPLLTKLDNIFTQFKLTSDESFHVVTHIHMKTGNKFYSFPLT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Putative U6 snRNA phosphodiesterase confidentQ9VHB3
Putative U6 snRNA phosphodiesterase confidentQ5I0I5
Putative U6 snRNA phosphodiesterase confidentQ6DEF6

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0000175 [MF]3'-5'-exoribonuclease activityprobableGO:0016787, GO:0008408, GO:0016796, GO:0004518, GO:0004527, GO:0004540, GO:0004532, GO:0016788, GO:0003824, GO:0016896, GO:0003674
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4H7W, chain A
Confidence level:confident
Coverage over the Query: 19-201
View the alignment between query and template
View the model in PyMOL