Query psy16587
Match_columns 130
No_of_seqs 159 out of 397
Neff 6.8
Searched_HMMs 29240
Date Fri Aug 16 16:47:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16587.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16587hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 99.8 1.5E-17 5.1E-22 128.2 13.3 94 7-119 84-182 (284)
2 1dqv_A Synaptotagmin III; beta 99.7 7.5E-17 2.6E-21 125.9 9.5 94 7-119 85-184 (296)
3 3b7y_A E3 ubiquitin-protein li 99.3 4E-12 1.4E-16 89.8 7.3 68 2-69 80-153 (153)
4 1wfj_A Putative elicitor-respo 99.2 5.4E-12 1.9E-16 87.3 4.6 68 2-72 65-133 (136)
5 2dmh_A Myoferlin; beta-sandwic 99.2 2.9E-11 9.9E-16 84.0 8.1 66 6-72 68-136 (140)
6 3m7f_B E3 ubiquitin-protein li 99.2 2.6E-11 8.8E-16 87.8 7.6 69 3-71 69-143 (176)
7 3kwu_A MUNC13-1; calcium bindi 99.2 7.6E-11 2.6E-15 82.7 8.7 66 2-69 71-147 (148)
8 1gmi_A Protein kinase C, epsil 99.2 3.6E-11 1.2E-15 83.6 5.3 57 8-71 77-135 (136)
9 2ep6_A MCTP2 protein; beta san 99.1 2.8E-11 9.7E-16 83.6 4.6 66 2-69 67-132 (133)
10 1rlw_A Phospholipase A2, CALB 99.0 4.6E-10 1.6E-14 76.4 6.5 59 5-69 67-125 (126)
11 2fk9_A Protein kinase C, ETA t 99.0 3.9E-10 1.3E-14 81.6 5.4 55 7-68 98-156 (157)
12 3l9b_A Otoferlin; C2-domain, b 98.9 1.3E-09 4.6E-14 78.1 5.7 67 5-72 77-143 (144)
13 2nq3_A Itchy homolog E3 ubiqui 98.9 7.3E-10 2.5E-14 80.8 3.6 66 6-71 93-163 (173)
14 1wfm_A Synaptotagmin XIII; C2 98.9 5E-09 1.7E-13 73.0 6.7 47 7-53 89-135 (138)
15 3pyc_A E3 ubiquitin-protein li 98.8 2.5E-09 8.5E-14 73.6 4.7 60 8-67 66-131 (132)
16 2b3r_A Phosphatidylinositol-4- 98.8 1.4E-08 4.7E-13 70.5 6.4 47 6-52 86-132 (134)
17 3f04_A Synaptotagmin-1; C2A, c 98.8 1.6E-08 5.5E-13 70.3 6.4 44 7-50 99-142 (143)
18 2enp_A B/K protein; C2 type 1, 98.7 3.2E-08 1.1E-12 69.1 7.0 53 55-126 9-75 (147)
19 2q3x_A Regulating synaptic mem 98.7 2.6E-08 9E-13 71.8 6.6 52 1-52 89-141 (171)
20 1rsy_A Synaptotagmin I; calciu 98.7 2.9E-08 9.9E-13 69.9 6.6 45 7-51 107-151 (152)
21 1v27_A Regulating synaptic mem 98.7 2.4E-08 8.3E-13 68.9 5.5 53 55-126 4-65 (141)
22 2bwq_A Regulating synaptic mem 98.7 3E-08 1E-12 67.5 5.9 50 58-126 4-62 (129)
23 3fbk_A RGS3, RGP3, regulator o 98.7 3E-08 1E-12 70.0 6.0 46 55-119 10-58 (153)
24 2chd_A Rabphilin-3A, exophilin 98.7 3.6E-08 1.2E-12 68.4 6.2 53 55-126 12-73 (142)
25 1tjx_A Similar to synaptotagmi 98.7 3.3E-08 1.1E-12 70.0 6.0 46 55-119 8-57 (159)
26 2d8k_A Synaptotagmin VII; exoc 98.7 4.5E-08 1.5E-12 67.9 6.2 45 7-51 92-136 (141)
27 3f04_A Synaptotagmin-1; C2A, c 98.7 5.3E-08 1.8E-12 67.6 6.5 53 55-126 17-76 (143)
28 2z0u_A WW domain-containing pr 98.6 2.1E-08 7.1E-13 71.8 4.4 54 55-127 26-89 (155)
29 3n5a_A Synaptotagmin-7; calciu 98.6 3.7E-08 1.3E-12 67.5 5.6 43 58-119 2-48 (138)
30 2cm5_A Rabphilin-3A; protein t 98.6 5.7E-08 2E-12 69.3 6.7 53 55-126 20-81 (166)
31 3fdw_A Synaptotagmin-like prot 98.6 6.1E-09 2.1E-13 73.0 1.5 46 7-52 91-136 (148)
32 1w15_A Synaptotagmin IV; metal 98.6 4.2E-08 1.4E-12 69.0 5.7 46 55-119 13-62 (153)
33 1rh8_A Piccolo protein; beta-s 98.6 2.6E-08 8.7E-13 69.0 4.5 46 6-51 94-139 (142)
34 2d8k_A Synaptotagmin VII; exoc 98.6 8.6E-08 2.9E-12 66.5 7.1 53 55-126 9-68 (141)
35 2chd_A Rabphilin-3A, exophilin 98.6 4.6E-08 1.6E-12 67.8 5.6 44 8-51 98-141 (142)
36 2dmg_A KIAA1228 protein; beta- 98.6 1.2E-07 4.2E-12 65.6 7.7 53 55-126 7-67 (142)
37 1rsy_A Synaptotagmin I; calciu 98.6 8.2E-08 2.8E-12 67.6 6.7 53 55-126 25-84 (152)
38 2enp_A B/K protein; C2 type 1, 98.6 8.1E-08 2.8E-12 67.1 6.1 44 8-51 99-142 (147)
39 2cjt_A UNC-13 homolog A, MUNC1 98.6 5.2E-08 1.8E-12 67.8 5.0 38 2-40 55-92 (131)
40 3fdw_A Synaptotagmin-like prot 98.6 7.2E-08 2.5E-12 67.5 5.8 46 56-120 7-57 (148)
41 3fbk_A RGS3, RGP3, regulator o 98.6 3.4E-08 1.2E-12 69.7 4.1 49 4-52 89-139 (153)
42 1ugk_A Synaptotagmin IV, KIAA1 98.6 8.4E-08 2.9E-12 66.3 5.8 53 55-126 5-65 (138)
43 1a25_A CALB, protein kinase C 98.6 1.9E-08 6.4E-13 70.6 2.2 46 7-53 97-142 (149)
44 1v27_A Regulating synaptic mem 98.6 2.2E-07 7.5E-12 64.0 7.3 47 6-53 88-136 (141)
45 2z0u_A WW domain-containing pr 98.5 9.1E-08 3.1E-12 68.4 5.3 43 7-49 111-154 (155)
46 3jzy_A Intersectin 2; C2 domai 98.5 5.9E-08 2E-12 79.9 4.3 57 7-68 447-507 (510)
47 1ugk_A Synaptotagmin IV, KIAA1 98.5 2.9E-07 9.9E-12 63.5 6.7 46 7-52 89-135 (138)
48 3rdl_A Protein kinase C alpha 98.5 2.7E-07 9.2E-12 63.2 6.5 50 56-126 2-60 (137)
49 2bwq_A Regulating synaptic mem 98.5 1.9E-07 6.6E-12 63.4 5.1 43 6-49 85-129 (129)
50 3rdl_A Protein kinase C alpha 98.5 5.3E-08 1.8E-12 66.8 2.1 46 6-52 81-126 (137)
51 1rh8_A Piccolo protein; beta-s 98.4 5E-07 1.7E-11 62.4 6.4 44 56-120 4-51 (142)
52 2cjs_A UNC-13 homolog A, MUNC1 98.4 3.6E-07 1.2E-11 66.3 5.8 38 2-40 64-101 (167)
53 2dmg_A KIAA1228 protein; beta- 98.4 2.6E-07 9E-12 63.9 4.8 45 8-52 91-137 (142)
54 3nsj_A Perforin-1; pore formin 98.4 6.2E-07 2.1E-11 76.0 7.8 49 6-66 453-501 (540)
55 2r83_A Synaptotagmin-1; C2A-C2 98.4 6.6E-07 2.2E-11 68.4 6.8 52 56-126 3-61 (284)
56 1wfm_A Synaptotagmin XIII; C2 98.4 9.1E-07 3.1E-11 61.3 6.4 53 55-126 9-66 (138)
57 3n5a_A Synaptotagmin-7; calciu 98.4 3.8E-07 1.3E-11 62.4 4.4 42 8-49 84-137 (138)
58 3bxj_A RAS GTPase-activating p 98.4 7.2E-08 2.5E-12 80.3 0.8 67 5-71 67-159 (483)
59 1dqv_A Synaptotagmin III; beta 98.3 6.5E-07 2.2E-11 69.4 6.0 52 56-126 4-62 (296)
60 2cm5_A Rabphilin-3A; protein t 98.3 1.1E-06 3.7E-11 62.6 6.0 46 7-52 104-161 (166)
61 1tjx_A Similar to synaptotagmi 98.3 1.3E-06 4.5E-11 61.6 6.0 45 7-51 92-148 (159)
62 1a25_A CALB, protein kinase C 98.3 1.8E-06 6.3E-11 60.3 6.6 50 56-126 17-75 (149)
63 2q3x_A Regulating synaptic mem 98.3 1.1E-06 3.7E-11 63.2 5.3 43 56-119 16-63 (171)
64 1w15_A Synaptotagmin IV; metal 98.1 4.5E-06 1.5E-10 58.4 5.3 29 7-35 97-125 (153)
65 1djx_A PLC-D1, phosphoinositid 98.1 2.9E-06 9.8E-11 72.9 5.1 58 8-68 566-623 (624)
66 2b3r_A Phosphatidylinositol-4- 97.8 4E-05 1.4E-09 52.7 5.9 35 92-126 21-63 (134)
67 3kwu_A MUNC13-1; calcium bindi 97.8 1.6E-05 5.6E-10 55.1 3.7 42 86-127 11-57 (148)
68 2ep6_A MCTP2 protein; beta san 97.7 1.6E-05 5.4E-10 54.3 2.4 36 92-127 14-53 (133)
69 1cjy_A CPLA2, protein (cytosol 97.7 1.6E-05 5.4E-10 69.7 3.0 44 6-50 83-126 (749)
70 2dmh_A Myoferlin; beta-sandwic 97.7 4.4E-05 1.5E-09 52.3 4.2 37 91-127 7-46 (140)
71 1rlw_A Phospholipase A2, CALB 97.5 7.3E-05 2.5E-09 50.2 3.7 35 92-126 4-48 (126)
72 2fk9_A Protein kinase C, ETA t 97.5 5.9E-05 2E-09 54.1 3.3 39 88-126 25-79 (157)
73 3pyc_A E3 ubiquitin-protein li 97.4 0.00014 4.6E-09 49.5 4.0 35 92-126 6-46 (132)
74 3pfq_A PKC-B, PKC-beta, protei 97.4 0.0001 3.5E-09 63.2 3.6 46 5-51 236-281 (674)
75 1gmi_A Protein kinase C, epsil 97.3 0.00015 5.3E-09 49.6 3.1 28 92-119 7-49 (136)
76 2enj_A NPKC-theta, protein kin 97.2 0.001 3.5E-08 47.0 7.1 56 5-71 72-132 (138)
77 1wfj_A Putative elicitor-respo 97.2 0.00018 6.2E-09 48.9 2.9 36 92-127 11-50 (136)
78 1yrk_A NPKC-delta, protein kin 97.2 0.00094 3.2E-08 46.6 6.4 53 5-68 67-124 (126)
79 3m7f_B E3 ubiquitin-protein li 97.1 0.00029 1E-08 50.3 3.0 27 92-118 9-39 (176)
80 3b7y_A E3 ubiquitin-protein li 97.1 0.00031 1.1E-08 48.7 2.8 27 92-118 21-51 (153)
81 3ohm_B 1-phosphatidylinositol- 97.0 0.00096 3.3E-08 59.5 5.9 55 8-69 791-845 (885)
82 2nq3_A Itchy homolog E3 ubiqui 96.9 0.00058 2E-08 49.2 2.9 36 92-127 37-76 (173)
83 2zkm_X 1-phosphatidylinositol- 96.7 0.0021 7.2E-08 56.6 5.8 53 8-67 745-797 (799)
84 3pfq_A PKC-B, PKC-beta, protei 96.7 0.0028 9.6E-08 54.2 6.2 42 56-118 158-203 (674)
85 3qr0_A Phospholipase C-beta (P 96.5 0.004 1.4E-07 55.1 6.1 54 8-68 717-770 (816)
86 3jzy_A Intersectin 2; C2 domai 96.3 0.0026 8.9E-08 52.0 3.6 36 92-127 388-427 (510)
87 3nsj_A Perforin-1; pore formin 96.2 0.0029 9.8E-08 53.5 3.6 35 92-127 395-433 (540)
88 2cjt_A UNC-13 homolog A, MUNC1 96.1 0.0026 8.8E-08 43.6 2.4 24 92-115 6-30 (131)
89 2cjs_A UNC-13 homolog A, MUNC1 95.4 0.0086 2.9E-07 42.9 2.9 32 92-125 15-47 (167)
90 3l9b_A Otoferlin; C2-domain, b 94.8 0.016 5.3E-07 41.2 2.6 34 92-127 22-56 (144)
91 1djx_A PLC-D1, phosphoinositid 94.6 0.022 7.4E-07 48.8 3.4 27 92-118 498-530 (624)
92 1cjy_A CPLA2, protein (cytosol 94.3 0.017 5.9E-07 50.6 2.2 35 92-126 19-63 (749)
93 3bxj_A RAS GTPase-activating p 94.1 0.008 2.7E-07 49.8 -0.3 34 92-127 12-47 (483)
94 3qr0_A Phospholipase C-beta (P 90.8 0.16 5.4E-06 44.9 3.5 26 92-118 651-677 (816)
95 2zkm_X 1-phosphatidylinositol- 90.5 0.2 7E-06 44.1 3.9 26 92-118 679-705 (799)
96 3ohm_B 1-phosphatidylinositol- 90.2 0.23 8E-06 44.3 4.0 34 92-126 726-766 (885)
97 2yrb_A Protein fantom; beta sa 57.4 27 0.00092 24.7 5.8 61 8-69 89-150 (156)
98 2op6_A Heat shock 70 kDa prote 41.1 80 0.0027 21.2 6.2 55 5-66 42-100 (152)
99 2q2g_A HSP40 protein, heat sho 40.0 94 0.0032 21.7 7.0 81 10-120 78-165 (180)
100 3i38_A Putative chaperone DNAJ 40.0 45 0.0016 21.6 4.4 69 22-120 11-80 (109)
101 3agx_A DNAJ homolog subfamily 34.4 1.2E+02 0.0041 21.3 6.9 83 9-121 77-166 (181)
102 3lz8_A Putative chaperone DNAJ 34.0 57 0.002 25.4 4.8 81 10-120 217-300 (329)
103 1q5l_A Chaperone protein DNAK; 32.0 1.1E+02 0.0039 20.3 8.4 57 4-67 58-118 (135)
104 1nlt_A Protein YDJ1, mitochond 27.4 1.2E+02 0.0042 22.3 5.5 83 9-121 146-236 (248)
105 3uaf_A TTR-52; beta barrel/san 20.3 20 0.00068 24.0 -0.2 22 9-30 22-45 (117)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.75 E-value=1.5e-17 Score=128.21 Aligned_cols=94 Identities=27% Similarity=0.473 Sum_probs=82.5
Q ss_pred CceEEEEEEeCCCCCCCCcceEEEEeCccccCCceeEEEEecCCCCC-CCCCcccEEEEEEEecCcchhhhccccccccc
Q psy16587 7 GLVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCTDLILTLEDPNK-PEENLGDIYLSATLYPRSQEDRDQEASGTSES 85 (130)
Q Consensus 7 ~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~~-~~~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~ 85 (130)
...|.|.|||+|++++||+||++.|||+++..++..+.|++|....+ ..+..|+|+++++|.|..+
T Consensus 84 ~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~~~------------- 150 (284)
T 2r83_A 84 GKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPTAG------------- 150 (284)
T ss_dssp TCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEETTTT-------------
T ss_pred cCEEEEEEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEecCcCC-------------
Confidence 57999999999999999999999999999999999999999987543 2457899999999999775
Q ss_pred cccccceEEEEE-eCCCCCCCC---CCCcEEEEEEccC
Q psy16587 86 YSQKCTDLILTL-EDPNKPEEN---LGDIYLSATLYPR 119 (130)
Q Consensus 86 ~s~~~~~l~V~l-~a~nL~~~~---~~dpyVk~~L~~~ 119 (130)
.|.|.+ +|+||+.++ .+||||++++++.
T Consensus 151 ------~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~ 182 (284)
T 2r83_A 151 ------KLTVVILEAKNLKKMDVGGLSDPYVKIHLMQN 182 (284)
T ss_dssp ------EEEEEEEEEESCCCCSTTSCCCEEEEEEEEET
T ss_pred ------ceEEEEEEeECCCCcCCCCCcCeEEEEEEEeC
Confidence 677777 999999765 7899999999764
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.69 E-value=7.5e-17 Score=125.89 Aligned_cols=94 Identities=21% Similarity=0.340 Sum_probs=77.4
Q ss_pred CceEEEEEEeCCCCCCCCcceEEEEe-C-ccccCCceeEEEEecCCCCCCCCCcccEEEEEEEecCcchhhhcccccccc
Q psy16587 7 GLVVELQVFDYDWGLQDDFMGSASID-L-TTLELGRCTDLILTLEDPNKPEENLGDIYLSATLYPRSQEDRDQEASGTSE 84 (130)
Q Consensus 7 ~~~L~~~V~D~D~~~~dD~iG~~~i~-L-~~v~~~~~~~~~~~L~~~~~~~~~~G~I~l~L~~~p~~~~~~~~~~~~~~~ 84 (130)
+..|+|.|||+|++++||+||++.++ | .-.+.....+.|..|..........|+|+++++|.|..+
T Consensus 85 ~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~~~~------------ 152 (296)
T 1dqv_A 85 QRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYLPTAG------------ 152 (296)
T ss_dssp SCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEEETTTT------------
T ss_pred CCEEEEEEEEcCCCCCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEeccccc------------
Confidence 46899999999999999999999997 4 334445566789999875544567899999999999875
Q ss_pred ccccccceEEEEE-eCCCCCCCC---CCCcEEEEEEccC
Q psy16587 85 SYSQKCTDLILTL-EDPNKPEEN---LGDIYLSATLYPR 119 (130)
Q Consensus 85 ~~s~~~~~l~V~l-~a~nL~~~~---~~dpyVk~~L~~~ 119 (130)
.|.|.+ +|+||+.++ .+||||+++++++
T Consensus 153 -------~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~ 184 (296)
T 1dqv_A 153 -------LLTVTIIKASNLKAMDLTGFSDPYVKASLISE 184 (296)
T ss_dssp -------EEEEEEEEEESCCCCSSSSCCCEEEEECCCTT
T ss_pred -------eeEEEEEEeecCCccCCCCCCCcEEEEEEEeC
Confidence 677777 999999775 6799999999753
No 3
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.31 E-value=4e-12 Score=89.77 Aligned_cols=68 Identities=21% Similarity=0.214 Sum_probs=57.0
Q ss_pred CcCCCCceEEEEEEeCCCCCCCCcceEEEEeCccccCCcee------EEEEecCCCCCCCCCcccEEEEEEEec
Q psy16587 2 PETTSGLVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCT------DLILTLEDPNKPEENLGDIYLSATLYP 69 (130)
Q Consensus 2 ~~~~~~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~------~~~~~L~~~~~~~~~~G~I~l~L~~~p 69 (130)
++......|.|+|||+|.+++||+||++.|+|+++..+... ..|++|....+.....|+|+|+++|.|
T Consensus 80 ~v~~~~~~l~~~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 80 RVHPQQHRLLFEVFDENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp EECTTTCEEEEEEEECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred EecCCCCEEEEEEEECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 34556789999999999999999999999999999876543 589999865433467899999999987
No 4
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.24 E-value=5.4e-12 Score=87.32 Aligned_cols=68 Identities=24% Similarity=0.404 Sum_probs=57.2
Q ss_pred CcCCCCceEEEEEEeCCCCCCCCcceEEEEeCccc-cCCceeEEEEecCCCCCCCCCcccEEEEEEEecCcc
Q psy16587 2 PETTSGLVVELQVFDYDWGLQDDFMGSASIDLTTL-ELGRCTDLILTLEDPNKPEENLGDIYLSATLYPRSQ 72 (130)
Q Consensus 2 ~~~~~~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v-~~~~~~~~~~~L~~~~~~~~~~G~I~l~L~~~p~~~ 72 (130)
++.+....|.|+|||+|.+++||+||++.|+|+++ ..+...+.|++|.. . ....|+|+|+++|.|...
T Consensus 65 ~v~~~~~~l~~~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~-~--~~~~G~i~l~l~~~p~~~ 133 (136)
T 1wfj_A 65 TVSEGTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVK-D--EEYKGEIWVALSFKPSGP 133 (136)
T ss_dssp EEESSCCEEEEEECCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEEE-T--TEEEEEEEEEEEEEECCS
T ss_pred EECCCCCEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCCCcEEEEeec-C--CccCEEEEEEEEEEeCCC
Confidence 34556789999999999999999999999999999 55566788999972 1 356799999999999764
No 5
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.24 E-value=2.9e-11 Score=83.99 Aligned_cols=66 Identities=20% Similarity=0.201 Sum_probs=56.9
Q ss_pred CCceEEEEEEeCCCCCCCCcceEEEEeCccccCCceeEEEEe---cCCCCCCCCCcccEEEEEEEecCcc
Q psy16587 6 SGLVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCTDLILT---LEDPNKPEENLGDIYLSATLYPRSQ 72 (130)
Q Consensus 6 ~~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~---L~~~~~~~~~~G~I~l~L~~~p~~~ 72 (130)
....|.|+|||+|.+++||+||++.|+|+++..+...+.|+. |.++.+ ....|.|+|+++|.|.+.
T Consensus 68 ~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~-~~~~G~l~l~~~~~p~~~ 136 (140)
T 2dmh_A 68 FSSSLGIIVKDFETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKG-QDTGATIDLVIGYDPPSG 136 (140)
T ss_dssp TTCEEEEEEEETTCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTC-CEEEEEEEEEEEECCCBS
T ss_pred CCCEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCC-CCCCCEEEEEEEEECCCC
Confidence 468999999999999999999999999999998888899987 665433 245699999999999764
No 6
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.22 E-value=2.6e-11 Score=87.85 Aligned_cols=69 Identities=20% Similarity=0.269 Sum_probs=51.3
Q ss_pred cCCCCceEEEEEEeCCCCCCCCcceEEEEeCccccCCcee-E-----EEEecCCCCCCCCCcccEEEEEEEecCc
Q psy16587 3 ETTSGLVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCT-D-----LILTLEDPNKPEENLGDIYLSATLYPRS 71 (130)
Q Consensus 3 ~~~~~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~-~-----~~~~L~~~~~~~~~~G~I~l~L~~~p~~ 71 (130)
+......|.|.|||+|.+++||+||++.|+|+++...... + .|++|..........|+|+|+++|.|..
T Consensus 69 v~~~~~~L~~~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~~ 143 (176)
T 3m7f_B 69 VLPQRHRILFEVFDENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPKN 143 (176)
T ss_dssp ECTTTCEEEEEEEECC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC--
T ss_pred EcCCCCEEEEEEEECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeCC
Confidence 4455679999999999999999999999999999987554 2 7999987544456789999999999984
No 7
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.20 E-value=7.6e-11 Score=82.67 Aligned_cols=66 Identities=24% Similarity=0.295 Sum_probs=55.3
Q ss_pred CcCCCCceEEEEEEeCCCC-----------CCCCcceEEEEeCccccCCceeEEEEecCCCCCCCCCcccEEEEEEEec
Q psy16587 2 PETTSGLVVELQVFDYDWG-----------LQDDFMGSASIDLTTLELGRCTDLILTLEDPNKPEENLGDIYLSATLYP 69 (130)
Q Consensus 2 ~~~~~~~~L~~~V~D~D~~-----------~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~~~~~~~G~I~l~L~~~p 69 (130)
.+.++.+.|.|.|||+|.+ ++||+||++.|||+++ ....+.|++|+.........|+|+|+++|..
T Consensus 71 ~v~~~~~~l~~~v~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l--~~~~~~w~~L~~~~~~~~~~G~i~l~l~~e~ 147 (148)
T 3kwu_A 71 ECHNSSDRIKVRVLDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTL--SGEMDVWYNLDKRTDKSAVSGAIRLHISVEI 147 (148)
T ss_dssp EECSTTCEEEEEEEECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGC--CSEEEEEEECBCSSTTCCCCCEEEEEEEEEC
T ss_pred EecCCCCEEEEEEEECCCCccccccccccCCCCccEEEEEEEHHHC--cCCCCEEEEcccCCCCCCCceEEEEEEEEEe
Confidence 3556778999999999986 7999999999999999 4567899999865444557899999999863
No 8
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.15 E-value=3.6e-11 Score=83.62 Aligned_cols=57 Identities=28% Similarity=0.303 Sum_probs=50.6
Q ss_pred ceEEEEEEeCCCCCCCCcceEEEEeCccccCC--ceeEEEEecCCCCCCCCCcccEEEEEEEecCc
Q psy16587 8 LVVELQVFDYDWGLQDDFMGSASIDLTTLELG--RCTDLILTLEDPNKPEENLGDIYLSATLYPRS 71 (130)
Q Consensus 8 ~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~--~~~~~~~~L~~~~~~~~~~G~I~l~L~~~p~~ 71 (130)
+.|.|.|||+|++++||+||++.|||+++..+ ...+.|++|+. .|+|+|+++|.+.+
T Consensus 77 ~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~-------~G~i~l~l~~~~~~ 135 (136)
T 1gmi_A 77 RKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP-------EGKVYVIIDLSGSS 135 (136)
T ss_dssp CEEEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS-------SCEEEEEEEEEEEE
T ss_pred CEEEEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC-------CeEEEEEEEEEecC
Confidence 78999999999999999999999999999874 34589999875 39999999998864
No 9
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.15 E-value=2.8e-11 Score=83.61 Aligned_cols=66 Identities=29% Similarity=0.370 Sum_probs=55.8
Q ss_pred CcCCCCceEEEEEEeCCCCCCCCcceEEEEeCccccCCceeEEEEecCCCCCCCCCcccEEEEEEEec
Q psy16587 2 PETTSGLVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCTDLILTLEDPNKPEENLGDIYLSATLYP 69 (130)
Q Consensus 2 ~~~~~~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~~~~~~~G~I~l~L~~~p 69 (130)
++.++...|.|+|||+|.+++||+||++.|+|+++..+. ..|++|..........|+|+|+++|..
T Consensus 67 ~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 67 PIKDIHDVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp EESCTTCEEEEEEEEEETTEEEEECCBCEEEGGGCCSSC--CEECCCBCSCTTSCCSSEEEEEEEEEE
T ss_pred EecCCCCEEEEEEEECCCCCCCCeeEEEEEEHHHccCCC--ceEEEeecCCCCCccceEEEEEEEEEe
Confidence 455677899999999999999999999999999997654 479999876544567899999999864
No 10
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.03 E-value=4.6e-10 Score=76.41 Aligned_cols=59 Identities=14% Similarity=0.322 Sum_probs=50.4
Q ss_pred CCCceEEEEEEeCCCCCCCCcceEEEEeCccccCCceeEEEEecCCCCCCCCCcccEEEEEEEec
Q psy16587 5 TSGLVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCTDLILTLEDPNKPEENLGDIYLSATLYP 69 (130)
Q Consensus 5 ~~~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~~~~~~~G~I~l~L~~~p 69 (130)
.....|.|+|||+|.+ +||+||++.|||+++..+...+.|++|....+ |.|+|+|.-.|
T Consensus 67 ~~~~~l~i~V~d~d~~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~-----g~i~~~le~~~ 125 (126)
T 1rlw_A 67 NQENVLEITLMDANYV-MDETLGTATFTVSSMKVGEKKEVPFIFNQVTE-----MVLEMSLEVAS 125 (126)
T ss_dssp TSCCEEEEEEEECCSS-CCEEEEEEEEEGGGSCTTCEEEEEEEETTTEE-----EEEEEEEECCC
T ss_pred CCCCEEEEEEEECCCC-CCceeEEEEEEHHHccCCCcEEEEEEcCCCce-----EEEEEEEEeCC
Confidence 3467899999999999 69999999999999999999999999987433 78887776555
No 11
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.00 E-value=3.9e-10 Score=81.61 Aligned_cols=55 Identities=24% Similarity=0.256 Sum_probs=49.4
Q ss_pred CceEEEEEEeCCCCCCCCcceEEEEeCccccCC----ceeEEEEecCCCCCCCCCcccEEEEEEEe
Q psy16587 7 GLVVELQVFDYDWGLQDDFMGSASIDLTTLELG----RCTDLILTLEDPNKPEENLGDIYLSATLY 68 (130)
Q Consensus 7 ~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~----~~~~~~~~L~~~~~~~~~~G~I~l~L~~~ 68 (130)
.+.|.|.|||+|++++||+||++.|||+++..+ +..+.|++|++ .|.|+|+++|.
T Consensus 98 ~~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~-------~G~i~l~l~~~ 156 (157)
T 2fk9_A 98 GGHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP-------EGKVFVVITLT 156 (157)
T ss_dssp ECEEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS-------SCEEEEEEEEC
T ss_pred CCEEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC-------CcEEEEEEEEE
Confidence 468999999999999999999999999999865 77899999975 39999999984
No 12
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=98.92 E-value=1.3e-09 Score=78.10 Aligned_cols=67 Identities=16% Similarity=0.216 Sum_probs=59.5
Q ss_pred CCCceEEEEEEeCCCCCCCCcceEEEEeCccccCCceeEEEEecCCCCCCCCCcccEEEEEEEecCcc
Q psy16587 5 TSGLVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCTDLILTLEDPNKPEENLGDIYLSATLYPRSQ 72 (130)
Q Consensus 5 ~~~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~~~~~~~G~I~l~L~~~p~~~ 72 (130)
+.+..|.|+||||+++.+|.+||++.|+|.++...+....+.+|.+.+... -.|.|+|+++|.|..+
T Consensus 77 d~~e~L~v~V~d~~~v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~-~~a~I~l~l~Y~pp~g 143 (144)
T 3l9b_A 77 DRNEVLEIQIFNYSKVFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAI-IKTSLSMEVRYQAADG 143 (144)
T ss_dssp CTTCEEEEEEEEECTTSCCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCE-EEEEEEEEEEEEETTC
T ss_pred CCCCEEEEEEEECccccCCCEEEEEEEEhHHhccCCeEEEeecccCCCCCc-cccEEEEEEEecCCCC
Confidence 678899999999999999999999999999999999999999998876532 3389999999999764
No 13
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=98.90 E-value=7.3e-10 Score=80.81 Aligned_cols=66 Identities=17% Similarity=0.214 Sum_probs=53.7
Q ss_pred CCceEEEEEEeCCCCCCCCcceEEEEeCccccCCc-----eeEEEEecCCCCCCCCCcccEEEEEEEecCc
Q psy16587 6 SGLVVELQVFDYDWGLQDDFMGSASIDLTTLELGR-----CTDLILTLEDPNKPEENLGDIYLSATLYPRS 71 (130)
Q Consensus 6 ~~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~-----~~~~~~~L~~~~~~~~~~G~I~l~L~~~p~~ 71 (130)
+...|.|+|||+|.+++||+||++.|+|+++.... ....|++|...+......|+|+++|+|.+..
T Consensus 93 ~~~~L~~~V~D~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~~ 163 (173)
T 2nq3_A 93 PVSKLHFRVWSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQLE 163 (173)
T ss_dssp TTCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEECC
T ss_pred CCCEEEEEEEECCCCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeecc
Confidence 47899999999999999999999999999986421 2377999987533235679999999999854
No 14
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=98.86 E-value=5e-09 Score=72.98 Aligned_cols=47 Identities=11% Similarity=0.024 Sum_probs=43.3
Q ss_pred CceEEEEEEeCCCCCCCCcceEEEEeCccccCCceeEEEEecCCCCC
Q psy16587 7 GLVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCTDLILTLEDPNK 53 (130)
Q Consensus 7 ~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~~ 53 (130)
...|+|.|||+|++++||+||++.|||++++.+...+.|++|..+.+
T Consensus 89 ~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 135 (138)
T 1wfm_A 89 TATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSGP 135 (138)
T ss_dssp TCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCCSC
T ss_pred CCEEEEEEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcCCCc
Confidence 57899999999999999999999999999998888999999998643
No 15
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=98.85 E-value=2.5e-09 Score=73.61 Aligned_cols=60 Identities=15% Similarity=0.149 Sum_probs=47.0
Q ss_pred ceEEEEEEeCCCCCC---CCcceEEEEeCccc-cCCceeEEEEecCCC--CCCCCCcccEEEEEEE
Q psy16587 8 LVVELQVFDYDWGLQ---DDFMGSASIDLTTL-ELGRCTDLILTLEDP--NKPEENLGDIYLSATL 67 (130)
Q Consensus 8 ~~L~~~V~D~D~~~~---dD~iG~~~i~L~~v-~~~~~~~~~~~L~~~--~~~~~~~G~I~l~L~~ 67 (130)
+.|.|+|||+|.+++ ||+||++.|||+.+ ........|++|... ....+..|+|+++|++
T Consensus 66 ~~l~~~v~d~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 66 DSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp CCEEEEEEEGGGTTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CEEEEEEEECCCCCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 459999999999876 89999999999998 444444577888653 3334568999999986
No 16
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=98.77 E-value=1.4e-08 Score=70.48 Aligned_cols=47 Identities=17% Similarity=0.208 Sum_probs=42.3
Q ss_pred CCceEEEEEEeCCCCCCCCcceEEEEeCccccCCceeEEEEecCCCC
Q psy16587 6 SGLVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCTDLILTLEDPN 52 (130)
Q Consensus 6 ~~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~ 52 (130)
....|.|+|||+|++++||+||++.|||+++..++..+.|++|.+..
T Consensus 86 ~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 132 (134)
T 2b3r_A 86 RQRELQLSVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLTAAT 132 (134)
T ss_dssp TTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC--
T ss_pred CcCEEEEEEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCCcc
Confidence 35799999999999999999999999999999989999999998743
No 17
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=98.75 E-value=1.6e-08 Score=70.26 Aligned_cols=44 Identities=23% Similarity=0.473 Sum_probs=41.7
Q ss_pred CceEEEEEEeCCCCCCCCcceEEEEeCccccCCceeEEEEecCC
Q psy16587 7 GLVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCTDLILTLED 50 (130)
Q Consensus 7 ~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~ 50 (130)
...|+|.|||+|.+++||+||++.|+|+++..+...+.|++|+.
T Consensus 99 ~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 99 GKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp TCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 47899999999999999999999999999999999999999986
No 18
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.72 E-value=3.2e-08 Score=69.14 Aligned_cols=53 Identities=19% Similarity=0.271 Sum_probs=42.6
Q ss_pred CCCcccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCC----------CCCCcEEEEEEcc---Cc
Q psy16587 55 EENLGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEE----------NLGDIYLSATLYP---RS 120 (130)
Q Consensus 55 ~~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~----------~~~dpyVk~~L~~---~~ 120 (130)
....|+|+++|+|.|..+ .|.|.| +|+||+.. +.+||||++++.+ ..
T Consensus 9 ~~~~G~l~~~l~y~~~~~-------------------~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~ 69 (147)
T 2enp_A 9 KYQLGMLHFSTQYDLLHN-------------------HLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNS 69 (147)
T ss_dssp CCCCCEEEEEEEEETTTT-------------------EEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSC
T ss_pred CCcceEEEEEEEEcCCCC-------------------EEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcc
Confidence 467899999999999885 677777 99999973 2689999999984 34
Q ss_pred ccccce
Q psy16587 121 QEDRDQ 126 (130)
Q Consensus 121 ~~s~~~ 126 (130)
++++++
T Consensus 70 ~kT~v~ 75 (147)
T 2enp_A 70 KQTGVK 75 (147)
T ss_dssp EECCCC
T ss_pred eEeecc
Confidence 555554
No 19
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=98.71 E-value=2.6e-08 Score=71.80 Aligned_cols=52 Identities=31% Similarity=0.372 Sum_probs=46.3
Q ss_pred CCcCCCCceEEEEEE-eCCCCCCCCcceEEEEeCccccCCceeEEEEecCCCC
Q psy16587 1 MPETTSGLVVELQVF-DYDWGLQDDFMGSASIDLTTLELGRCTDLILTLEDPN 52 (130)
Q Consensus 1 ~~~~~~~~~L~~~V~-D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~ 52 (130)
|++......|.|+|| |+|++++||+||++.|+|+++..++..+.|++|....
T Consensus 89 f~v~~~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 141 (171)
T 2q3x_A 89 FDESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPS 141 (171)
T ss_dssp CSSCCTTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCGG
T ss_pred EEecCCCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCcc
Confidence 345556789999999 9999999999999999999999999999999998753
No 20
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.71 E-value=2.9e-08 Score=69.92 Aligned_cols=45 Identities=22% Similarity=0.465 Sum_probs=42.3
Q ss_pred CceEEEEEEeCCCCCCCCcceEEEEeCccccCCceeEEEEecCCC
Q psy16587 7 GLVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCTDLILTLEDP 51 (130)
Q Consensus 7 ~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~ 51 (130)
...|.|+|||+|.+++||+||++.|+|+++..+...+.|++|.++
T Consensus 107 ~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 151 (152)
T 1rsy_A 107 GKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSA 151 (152)
T ss_dssp TCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBCC
T ss_pred CCEEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCCC
Confidence 578999999999999999999999999999999999999999874
No 21
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=98.68 E-value=2.4e-08 Score=68.87 Aligned_cols=53 Identities=11% Similarity=0.206 Sum_probs=42.7
Q ss_pred CCCcccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCCC---CCCcEEEEEEc-----cCcccccc
Q psy16587 55 EENLGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEEN---LGDIYLSATLY-----PRSQEDRD 125 (130)
Q Consensus 55 ~~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~~---~~dpyVk~~L~-----~~~~~s~~ 125 (130)
.+..|+|+++|.|.|..+ .|.|.+ +|+||+.++ .+||||++++. ...++|++
T Consensus 4 ~~~~G~i~~~l~y~~~~~-------------------~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~ 64 (141)
T 1v27_A 4 GSSGGQLSIKLWFDKVGH-------------------QLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKT 64 (141)
T ss_dssp CCCCCEEEEEEEEETTTT-------------------EEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCC
T ss_pred CCcccEEEEEEEEeCCCC-------------------EEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCcc
Confidence 356799999999999875 677777 999999765 68999999993 45556665
Q ss_pred e
Q psy16587 126 Q 126 (130)
Q Consensus 126 ~ 126 (130)
+
T Consensus 65 ~ 65 (141)
T 1v27_A 65 V 65 (141)
T ss_dssp C
T ss_pred c
Confidence 4
No 22
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.68 E-value=3e-08 Score=67.54 Aligned_cols=50 Identities=12% Similarity=0.231 Sum_probs=40.3
Q ss_pred cccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCCC---CCCcEEEEEEc-----cCcccccce
Q psy16587 58 LGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEEN---LGDIYLSATLY-----PRSQEDRDQ 126 (130)
Q Consensus 58 ~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~~---~~dpyVk~~L~-----~~~~~s~~~ 126 (130)
.|+|++++.|.|..+ .|.|.+ +|+||+.++ .+||||++++. ...++|+++
T Consensus 4 ~G~l~~~l~y~~~~~-------------------~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~ 62 (129)
T 2bwq_A 4 SGQLSIKLWFDKVGH-------------------QLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTV 62 (129)
T ss_dssp CCEEEEEEEEETTTT-------------------EEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCC
T ss_pred eEEEEEEEEEccCCC-------------------EEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccc
Confidence 599999999999875 677777 999999765 67999999994 444555543
No 23
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=98.68 E-value=3e-08 Score=70.00 Aligned_cols=46 Identities=20% Similarity=0.274 Sum_probs=37.8
Q ss_pred CCCcccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCCC--CCCcEEEEEEccC
Q psy16587 55 EENLGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEEN--LGDIYLSATLYPR 119 (130)
Q Consensus 55 ~~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~~--~~dpyVk~~L~~~ 119 (130)
..+.|+|+|+|+|.|..+ .|.|.| +|+||+.++ .+||||++++.+.
T Consensus 10 ~~~~G~~~lsL~y~~~~~-------------------~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~~ 58 (153)
T 3fbk_A 10 HKVQGAGQLRLSIDAQDR-------------------VLLLHIIEGKGLISKQPGTCDPYVKISLIPE 58 (153)
T ss_dssp ---CCCCEEEEEEEESSS-------------------EEEEEEEEEESCCCCSSSCCCEEEEEEEESC
T ss_pred cCCCCEEEEEEEEECCCC-------------------EEEEEEEEeeCCCCCCCCCCCEEEEEEEEcC
Confidence 467799999999999886 678888 999999765 7899999999654
No 24
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=98.68 E-value=3.6e-08 Score=68.39 Aligned_cols=53 Identities=19% Similarity=0.266 Sum_probs=41.8
Q ss_pred CCCcccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCCC---CCCcEEEEEEcc-----Ccccccc
Q psy16587 55 EENLGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEEN---LGDIYLSATLYP-----RSQEDRD 125 (130)
Q Consensus 55 ~~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~~---~~dpyVk~~L~~-----~~~~s~~ 125 (130)
.+..|+|.++|.|.|..+ .|.|.| +|+||+.++ .+||||++++++ ..++|++
T Consensus 12 ~~~~G~l~~~l~y~~~~~-------------------~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v 72 (142)
T 2chd_A 12 ATTLGALEFSLLYDQDNS-------------------NLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKT 72 (142)
T ss_dssp --CCCEEEEEEEEEGGGT-------------------EEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCC
T ss_pred CCccceEEEEEEEeCCCC-------------------EEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCc
Confidence 356799999999998775 678888 999999765 689999999986 4455554
Q ss_pred e
Q psy16587 126 Q 126 (130)
Q Consensus 126 ~ 126 (130)
+
T Consensus 73 ~ 73 (142)
T 2chd_A 73 L 73 (142)
T ss_dssp C
T ss_pred C
Confidence 3
No 25
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=98.67 E-value=3.3e-08 Score=70.02 Aligned_cols=46 Identities=30% Similarity=0.452 Sum_probs=39.6
Q ss_pred CCCcccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCCC---CCCcEEEEEEccC
Q psy16587 55 EENLGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEEN---LGDIYLSATLYPR 119 (130)
Q Consensus 55 ~~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~~---~~dpyVk~~L~~~ 119 (130)
.+..|+|+++|+|.|..+ .|.|.+ +|+||+.++ .+||||+++++..
T Consensus 8 ~~~~G~l~~~l~y~~~~~-------------------~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~ 57 (159)
T 1tjx_A 8 LEKLGDICFSLRYVPTAG-------------------KLTVVILEAKNLKKMDVGGLSDPYVKIHLMQN 57 (159)
T ss_dssp GGCCCEEEEEEEEETTTT-------------------EEEEEEEEEESCCCCSTTSCCCEEEEEEEEET
T ss_pred cCcCCeEEEEEEEcCCCC-------------------EEEEEEEEeeCCCCccCCCCCCeEEEEEEEeC
Confidence 456899999999999885 677777 999999765 6899999999864
No 26
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.65 E-value=4.5e-08 Score=67.94 Aligned_cols=45 Identities=29% Similarity=0.405 Sum_probs=42.1
Q ss_pred CceEEEEEEeCCCCCCCCcceEEEEeCccccCCceeEEEEecCCC
Q psy16587 7 GLVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCTDLILTLEDP 51 (130)
Q Consensus 7 ~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~ 51 (130)
...|.|+|||+|++++||+||++.|+|+++..+...+.|++|...
T Consensus 92 ~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 92 QRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPS 136 (141)
T ss_dssp TSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred cCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence 578999999999999999999999999999998889999999864
No 27
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=98.65 E-value=5.3e-08 Score=67.59 Aligned_cols=53 Identities=21% Similarity=0.335 Sum_probs=42.7
Q ss_pred CCCcccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCCC---CCCcEEEEEEccC---cccccce
Q psy16587 55 EENLGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEEN---LGDIYLSATLYPR---SQEDRDQ 126 (130)
Q Consensus 55 ~~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~~---~~dpyVk~~L~~~---~~~s~~~ 126 (130)
.+.+|+|+++++|.+..+ .|.|.+ +|+||+.++ .+||||++++.+. .++++++
T Consensus 17 ~~~~G~l~~~l~y~~~~~-------------------~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~ 76 (143)
T 3f04_A 17 VEKLGKLQYSLDYDFQNN-------------------QLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVH 76 (143)
T ss_dssp CCCCCEEEEEEEEETTTT-------------------EEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCC
T ss_pred ccCeEEEEEEEEEeCCCC-------------------EEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccC
Confidence 356799999999999885 677777 999999765 7899999999543 5556554
No 28
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=98.65 E-value=2.1e-08 Score=71.77 Aligned_cols=54 Identities=7% Similarity=0.086 Sum_probs=42.7
Q ss_pred CCCcccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCCC---CCCcEEEEEEcc---C---ccccc
Q psy16587 55 EENLGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEEN---LGDIYLSATLYP---R---SQEDR 124 (130)
Q Consensus 55 ~~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~~---~~dpyVk~~L~~---~---~~~s~ 124 (130)
....|+|+++|.|.|..+ .|.|.+ +|+||++++ .+|||||++|.+ . .+||+
T Consensus 26 ~~~~G~l~~sl~y~~~~~-------------------~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~ 86 (155)
T 2z0u_A 26 AVGATRIQIALKYDEKNK-------------------QFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTR 86 (155)
T ss_dssp --CCEEEEEEEEEETTTT-------------------EEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECC
T ss_pred cCCcEEEEEEEEEcCCCC-------------------EEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCC
Confidence 356799999999999885 677777 999999764 789999999987 2 45666
Q ss_pred cee
Q psy16587 125 DQN 127 (130)
Q Consensus 125 ~~~ 127 (130)
++.
T Consensus 87 v~~ 89 (155)
T 2z0u_A 87 PLD 89 (155)
T ss_dssp CEE
T ss_pred cCC
Confidence 653
No 29
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=98.65 E-value=3.7e-08 Score=67.55 Aligned_cols=43 Identities=21% Similarity=0.364 Sum_probs=37.6
Q ss_pred cccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCCC---CCCcEEEEEEccC
Q psy16587 58 LGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEEN---LGDIYLSATLYPR 119 (130)
Q Consensus 58 ~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~~---~~dpyVk~~L~~~ 119 (130)
.|+|+++|+|.|..+ .|.|.| +|+||+.++ .+||||++++++.
T Consensus 2 ~G~l~~sl~y~~~~~-------------------~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~ 48 (138)
T 3n5a_A 2 RGELLLSLCYNPSAN-------------------SIIVNIIKARNLKAMDIGGTSDPYVKVWLMYK 48 (138)
T ss_dssp CCEEEEEEEEETTTT-------------------EEEEEEEEEESCCCCBTTTBCCEEEEEEEEET
T ss_pred CcEEEEEEEEcCCCC-------------------eEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeC
Confidence 599999999999885 777777 999999764 7899999999865
No 30
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=98.64 E-value=5.7e-08 Score=69.33 Aligned_cols=53 Identities=17% Similarity=0.214 Sum_probs=42.8
Q ss_pred CCCcccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCCC---CCCcEEEEEEcc-----Ccccccc
Q psy16587 55 EENLGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEEN---LGDIYLSATLYP-----RSQEDRD 125 (130)
Q Consensus 55 ~~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~~---~~dpyVk~~L~~-----~~~~s~~ 125 (130)
.+..|+|+++|.|.|..+ .|.|.+ +|+||+.++ .+||||+++++. ..++|++
T Consensus 20 ~~~~G~l~~~l~y~~~~~-------------------~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v 80 (166)
T 2cm5_A 20 IEERGKILVSLMYSTQQG-------------------GLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQI 80 (166)
T ss_dssp CCCCCEEEEEEEEETTTT-------------------EEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCC
T ss_pred cCccceEEEEEEEECCCC-------------------EEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCc
Confidence 356799999999999875 677777 999999764 789999999987 3455554
Q ss_pred e
Q psy16587 126 Q 126 (130)
Q Consensus 126 ~ 126 (130)
+
T Consensus 81 ~ 81 (166)
T 2cm5_A 81 K 81 (166)
T ss_dssp C
T ss_pred c
Confidence 3
No 31
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=98.64 E-value=6.1e-09 Score=73.04 Aligned_cols=46 Identities=20% Similarity=0.283 Sum_probs=42.0
Q ss_pred CceEEEEEEeCCCCCCCCcceEEEEeCccccCCceeEEEEecCCCC
Q psy16587 7 GLVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCTDLILTLEDPN 52 (130)
Q Consensus 7 ~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~ 52 (130)
...|.|.|||+|.+++||+||++.|||+++..++..+.|++|.+..
T Consensus 91 ~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 136 (148)
T 3fdw_A 91 QRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKI 136 (148)
T ss_dssp GCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC-
T ss_pred ceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCcc
Confidence 4579999999999999999999999999999988899999998754
No 32
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=98.64 E-value=4.2e-08 Score=68.96 Aligned_cols=46 Identities=20% Similarity=0.416 Sum_probs=35.8
Q ss_pred CCCcccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCCC---CCCcEEEEEEccC
Q psy16587 55 EENLGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEEN---LGDIYLSATLYPR 119 (130)
Q Consensus 55 ~~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~~---~~dpyVk~~L~~~ 119 (130)
.+..|+|+++|+|.|..+ .|.|.+ +|+||+.++ .+||||++++.+.
T Consensus 13 ~~~~G~l~~~l~y~~~~~-------------------~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~ 62 (153)
T 1w15_A 13 PSGRGELLVSLCYQSTTN-------------------TLTVVVLKARHLPKSDVSGLSDPYVKVNLYHA 62 (153)
T ss_dssp ---CCEEEEEEEEETTTT-------------------EEEEEEEEEESCC------CCCEEEEEEEEET
T ss_pred CccccEEEEEEEEcCCCC-------------------EEEEEEEEeECCCCcCCCCCCCeEEEEEEEeC
Confidence 356799999999999885 677777 999999765 7899999999765
No 33
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.64 E-value=2.6e-08 Score=69.04 Aligned_cols=46 Identities=28% Similarity=0.374 Sum_probs=42.2
Q ss_pred CCceEEEEEEeCCCCCCCCcceEEEEeCccccCCceeEEEEecCCC
Q psy16587 6 SGLVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCTDLILTLEDP 51 (130)
Q Consensus 6 ~~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~ 51 (130)
....|.|+|||+|.+++||+||++.|||+++......+.|++|++.
T Consensus 94 ~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~ 139 (142)
T 1rh8_A 94 MKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQ 139 (142)
T ss_dssp TTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCC
T ss_pred cCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCcc
Confidence 3578999999999999999999999999999888888999999874
No 34
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.63 E-value=8.6e-08 Score=66.48 Aligned_cols=53 Identities=23% Similarity=0.379 Sum_probs=42.1
Q ss_pred CCCcccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCCC---CCCcEEEEEEcc---Ccccccce
Q psy16587 55 EENLGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEEN---LGDIYLSATLYP---RSQEDRDQ 126 (130)
Q Consensus 55 ~~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~~---~~dpyVk~~L~~---~~~~s~~~ 126 (130)
.+.+|+|+++|.|.|..+ .|.|.| +|+||+.++ .+||||++++.+ ..++++++
T Consensus 9 ~~~~G~l~~~l~y~~~~~-------------------~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~ 68 (141)
T 2d8k_A 9 RENLGRIQFSVGYNFQES-------------------TLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVK 68 (141)
T ss_dssp CCCCCEEEEEEEECSSSC-------------------CEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCC
T ss_pred CceeeEEEEEEEEeCCCC-------------------EEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceE
Confidence 456899999999999775 677777 999999765 689999999964 34455543
No 35
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=98.62 E-value=4.6e-08 Score=67.84 Aligned_cols=44 Identities=20% Similarity=0.311 Sum_probs=41.7
Q ss_pred ceEEEEEEeCCCCCCCCcceEEEEeCccccCCceeEEEEecCCC
Q psy16587 8 LVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCTDLILTLEDP 51 (130)
Q Consensus 8 ~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~ 51 (130)
..|.|.|||+|.+++||+||++.|+|+++..++....|++|+.|
T Consensus 98 ~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~p 141 (142)
T 2chd_A 98 KTLRISVCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLERV 141 (142)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBCC
T ss_pred CEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEecccC
Confidence 68999999999999999999999999999999999999999875
No 36
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.62 E-value=1.2e-07 Score=65.63 Aligned_cols=53 Identities=21% Similarity=0.229 Sum_probs=41.7
Q ss_pred CCCcccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCCC--CCCcEEEEEEccC-----cccccce
Q psy16587 55 EENLGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEEN--LGDIYLSATLYPR-----SQEDRDQ 126 (130)
Q Consensus 55 ~~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~~--~~dpyVk~~L~~~-----~~~s~~~ 126 (130)
.+..|+|++++.|.|..+ .|.|.+ +|+||+.++ -+||||++++.+. .++++++
T Consensus 7 ~~~~G~l~~~l~y~~~~~-------------------~L~v~v~~a~~L~~~d~~g~dpyv~v~l~~~~~~~~~~kT~v~ 67 (142)
T 2dmg_A 7 GSPLGQIQLTIRHSSQRN-------------------KLIVVVHACRNLIAFSEDGSDPYVRMYLLPDKRRSGRRKTHVS 67 (142)
T ss_dssp SCSSCEEEEEEEEETTTT-------------------EEEEEEEEEECCCCSSTTCCCEEEEEEEESCCCSSSCEECCCC
T ss_pred CCCcceEEEEEEEeCCCC-------------------EEEEEEEEeECCCCCCCCCCCeeEEEEEEcCCCCCCcccCCcc
Confidence 466899999999999885 677777 999999653 2899999999653 3455543
No 37
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.61 E-value=8.2e-08 Score=67.58 Aligned_cols=53 Identities=23% Similarity=0.389 Sum_probs=41.8
Q ss_pred CCCcccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCCC---CCCcEEEEEEcc---Ccccccce
Q psy16587 55 EENLGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEEN---LGDIYLSATLYP---RSQEDRDQ 126 (130)
Q Consensus 55 ~~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~~---~~dpyVk~~L~~---~~~~s~~~ 126 (130)
....|+|+++|.|.|..+ .|.|.| +|+||+.++ .+||||++++.+ ..++++++
T Consensus 25 ~~~~G~l~~~l~y~~~~~-------------------~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~ 84 (152)
T 1rsy_A 25 EEKLGKLQYSLDYDFQNN-------------------QLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVH 84 (152)
T ss_dssp -CCCCEEEEEEEEETTTT-------------------EEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCC
T ss_pred CCCceEEEEEEEEeCCCC-------------------EEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEecccc
Confidence 356799999999999875 677888 999999765 789999999964 34455543
No 38
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.59 E-value=8.1e-08 Score=67.06 Aligned_cols=44 Identities=20% Similarity=0.201 Sum_probs=40.8
Q ss_pred ceEEEEEEeCCCCCCCCcceEEEEeCccccCCceeEEEEecCCC
Q psy16587 8 LVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCTDLILTLEDP 51 (130)
Q Consensus 8 ~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~ 51 (130)
..|+|+|||+|++++||+||++.|+|+++...+....|+.|+..
T Consensus 99 ~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 142 (147)
T 2enp_A 99 RTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPS 142 (147)
T ss_dssp SEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBCC
T ss_pred CEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeecC
Confidence 58999999999999999999999999999988888899999864
No 39
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=98.59 E-value=5.2e-08 Score=67.76 Aligned_cols=38 Identities=18% Similarity=0.253 Sum_probs=32.5
Q ss_pred CcCCCCceEEEEEEeCCCCCCCCcceEEEEeCccccCCc
Q psy16587 2 PETTSGLVVELQVFDYDWGLQDDFMGSASIDLTTLELGR 40 (130)
Q Consensus 2 ~~~~~~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~ 40 (130)
.+.+....|.|+|||+| +++||+||++.|||+++....
T Consensus 55 ~v~~~~~~L~~~V~D~d-~~~dd~iG~~~i~l~~l~~~~ 92 (131)
T 2cjt_A 55 EINRLDLGLTVEVWNKG-LIWDTMVGTVWIPLRTIRQSN 92 (131)
T ss_dssp EECCCSSEEEEEEEECC-SSCEEEEEEEEEEGGGSCBCS
T ss_pred EEeCCCCeEEEEEEECC-CCCCCeEEEEEEEHHHhhhcC
Confidence 35566778999999999 889999999999999987543
No 40
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=98.59 E-value=7.2e-08 Score=67.47 Aligned_cols=46 Identities=20% Similarity=0.239 Sum_probs=38.7
Q ss_pred CCcccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCCC----CCCcEEEEEEccCc
Q psy16587 56 ENLGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEEN----LGDIYLSATLYPRS 120 (130)
Q Consensus 56 ~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~~----~~dpyVk~~L~~~~ 120 (130)
+..|+|+++|+|.|..+ .|.|.| +|+||+.++ .+||||++++.+..
T Consensus 7 ~~~G~l~~sl~y~~~~~-------------------~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~ 57 (148)
T 3fdw_A 7 FVTGRIAFSLKYEQQTQ-------------------SLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDK 57 (148)
T ss_dssp CCCCEEEEEEEEETTTT-------------------EEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCC
T ss_pred ccceEEEEEEEEeCCCC-------------------EEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCC
Confidence 46799999999999885 677788 999999643 68999999998543
No 41
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=98.59 E-value=3.4e-08 Score=69.74 Aligned_cols=49 Identities=10% Similarity=0.068 Sum_probs=42.3
Q ss_pred CCCCceEEEEEEeCCCCCC-CCcceEEEEeCccccC-CceeEEEEecCCCC
Q psy16587 4 TTSGLVVELQVFDYDWGLQ-DDFMGSASIDLTTLEL-GRCTDLILTLEDPN 52 (130)
Q Consensus 4 ~~~~~~L~~~V~D~D~~~~-dD~iG~~~i~L~~v~~-~~~~~~~~~L~~~~ 52 (130)
.+....|.|.|||+|.+++ ||+||++.|+|+++.. ++..+.|++|.+..
T Consensus 89 ~~~~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 89 EDDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEH 139 (153)
T ss_dssp GGTTSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTT
T ss_pred HHhCCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChh
Confidence 5566789999999999877 9999999999999984 78889999998753
No 42
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=98.58 E-value=8.4e-08 Score=66.30 Aligned_cols=53 Identities=19% Similarity=0.390 Sum_probs=42.2
Q ss_pred CCCcccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCCC----CCCcEEEEEEcc---Ccccccce
Q psy16587 55 EENLGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEEN----LGDIYLSATLYP---RSQEDRDQ 126 (130)
Q Consensus 55 ~~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~~----~~dpyVk~~L~~---~~~~s~~~ 126 (130)
....|+|++++.|.|..+ .|.|.+ +|+||+.++ .+||||++++.+ ..++++++
T Consensus 5 ~~~~G~l~~~l~y~~~~~-------------------~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~ 65 (138)
T 1ugk_A 5 SSGLGTLFFSLEYNFERK-------------------AFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVL 65 (138)
T ss_dssp CCCCCEEEEEEEEEGGGT-------------------EEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCC
T ss_pred CCccEEEEEEEEEECCCC-------------------EEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcC
Confidence 356799999999999875 677777 999999754 579999999975 44555543
No 43
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.56 E-value=1.9e-08 Score=70.58 Aligned_cols=46 Identities=24% Similarity=0.427 Sum_probs=40.7
Q ss_pred CceEEEEEEeCCCCCCCCcceEEEEeCccccCCceeEEEEecCCCCC
Q psy16587 7 GLVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCTDLILTLEDPNK 53 (130)
Q Consensus 7 ~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~~ 53 (130)
...|.|+|||+|.+++||+||++.|+|+++..+ ..+.|++|.+.+.
T Consensus 97 ~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~~~ 142 (149)
T 1a25_A 97 DRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA-GVDGWFKLLSQEE 142 (149)
T ss_dssp GCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTC-CEEEEEECBCHHH
T ss_pred CCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcC-ccCCeEEccCCCC
Confidence 468999999999999999999999999999865 5789999987543
No 44
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=98.55 E-value=2.2e-07 Score=63.98 Aligned_cols=47 Identities=19% Similarity=0.297 Sum_probs=41.0
Q ss_pred CCceEEEEEEeCCCCCC--CCcceEEEEeCccccCCceeEEEEecCCCCC
Q psy16587 6 SGLVVELQVFDYDWGLQ--DDFMGSASIDLTTLELGRCTDLILTLEDPNK 53 (130)
Q Consensus 6 ~~~~L~~~V~D~D~~~~--dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~~ 53 (130)
....|.|+|||+|.+++ ||+||++.|+|+++.... .+.|++|.+...
T Consensus 88 ~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~~ 136 (141)
T 1v27_A 88 RERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQTHDS 136 (141)
T ss_dssp GTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCSS
T ss_pred cCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECccccc
Confidence 35789999999999987 999999999999998765 889999987543
No 45
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=98.54 E-value=9.1e-08 Score=68.38 Aligned_cols=43 Identities=19% Similarity=0.227 Sum_probs=38.6
Q ss_pred CceEEEEEEeCCCCCCCCcceEEEEeCccccC-CceeEEEEecC
Q psy16587 7 GLVVELQVFDYDWGLQDDFMGSASIDLTTLEL-GRCTDLILTLE 49 (130)
Q Consensus 7 ~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~-~~~~~~~~~L~ 49 (130)
...|+|.|||+|++++||+||++.|+|+++.. +.....|++|.
T Consensus 111 ~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 111 QKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp HCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred cCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 46899999999999999999999999999964 67788999885
No 46
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=98.52 E-value=5.9e-08 Score=79.90 Aligned_cols=57 Identities=25% Similarity=0.348 Sum_probs=49.5
Q ss_pred CceEEEEEEeCCCCCCCCcceEEEEeCccccCCce----eEEEEecCCCCCCCCCcccEEEEEEEe
Q psy16587 7 GLVVELQVFDYDWGLQDDFMGSASIDLTTLELGRC----TDLILTLEDPNKPEENLGDIYLSATLY 68 (130)
Q Consensus 7 ~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~----~~~~~~L~~~~~~~~~~G~I~l~L~~~ 68 (130)
...|.|+|||+|.+++||+||++.+||+++..++. ...|+.|..... |+|++++.+.
T Consensus 447 ~~~l~~~v~d~d~~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~-----G~i~l~~~l~ 507 (510)
T 3jzy_A 447 QDVLCLTLFDRDQFSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEVPT-----GEVWVRFDLQ 507 (510)
T ss_dssp TCEEEEEEEECCSSSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSSSS-----CEEEEEEEEE
T ss_pred CCEEEEEEEeCCCCCCCCceEEEEEEHHHhccccCCCCceeeeecCCCCCC-----ceEEEEEEEE
Confidence 46799999999999999999999999999987655 778999987544 9999998764
No 47
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=98.50 E-value=2.9e-07 Score=63.55 Aligned_cols=46 Identities=20% Similarity=0.295 Sum_probs=39.9
Q ss_pred CceEEEEEEeCCCCCCCCcceEEEEeCccccCCc-eeEEEEecCCCC
Q psy16587 7 GLVVELQVFDYDWGLQDDFMGSASIDLTTLELGR-CTDLILTLEDPN 52 (130)
Q Consensus 7 ~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~-~~~~~~~L~~~~ 52 (130)
...|.|+|||+|.+++||+||++.|+|+++..+. ....|++|+...
T Consensus 89 ~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~~ 135 (138)
T 1ugk_A 89 ELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIISGP 135 (138)
T ss_dssp GCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBSSS
T ss_pred cCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhcCC
Confidence 4689999999999999999999999999998864 446789998643
No 48
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=98.49 E-value=2.7e-07 Score=63.22 Aligned_cols=50 Identities=28% Similarity=0.415 Sum_probs=38.9
Q ss_pred CCcccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCCC---CCCcEEEEEEc-----cCcccccce
Q psy16587 56 ENLGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEEN---LGDIYLSATLY-----PRSQEDRDQ 126 (130)
Q Consensus 56 ~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~~---~~dpyVk~~L~-----~~~~~s~~~ 126 (130)
+.+|+|++++.| ..+ .|.|.+ +|+||+.++ .+||||++++. ...++++++
T Consensus 2 ~~~G~l~~~l~~--~~~-------------------~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~ 60 (137)
T 3rdl_A 2 EKRGRIYLKAEV--TDE-------------------KLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTI 60 (137)
T ss_dssp CCCCEEEEEEEE--ETT-------------------EEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCC
T ss_pred CcceEEEEEEEE--cCC-------------------EEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceE
Confidence 467999999999 233 677777 999999765 78999999994 445566554
No 49
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.46 E-value=1.9e-07 Score=63.45 Aligned_cols=43 Identities=21% Similarity=0.315 Sum_probs=34.0
Q ss_pred CCceEEEEEEeCCCCCC--CCcceEEEEeCccccCCceeEEEEecC
Q psy16587 6 SGLVVELQVFDYDWGLQ--DDFMGSASIDLTTLELGRCTDLILTLE 49 (130)
Q Consensus 6 ~~~~L~~~V~D~D~~~~--dD~iG~~~i~L~~v~~~~~~~~~~~L~ 49 (130)
....|.|+|||+|.+++ ||+||++.|||+++.... .+.|++|+
T Consensus 85 ~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 85 RERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp GGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred cCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 35799999999999987 999999999999998765 88999885
No 50
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=98.45 E-value=5.3e-08 Score=66.82 Aligned_cols=46 Identities=22% Similarity=0.336 Sum_probs=40.4
Q ss_pred CCceEEEEEEeCCCCCCCCcceEEEEeCccccCCceeEEEEecCCCC
Q psy16587 6 SGLVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCTDLILTLEDPN 52 (130)
Q Consensus 6 ~~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~ 52 (130)
..+.|.|.|||+|.+++||+||++.|+|+++.... .+.|++|.+..
T Consensus 81 ~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~~ 126 (137)
T 3rdl_A 81 KDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQE 126 (137)
T ss_dssp GGCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC-EEEEEECBCHH
T ss_pred cCCEEEEEEEECCCCCCCceEEEEEEeHHHhccCc-cCceEECcCcc
Confidence 34689999999999999999999999999997655 88999998743
No 51
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.42 E-value=5e-07 Score=62.42 Aligned_cols=44 Identities=20% Similarity=0.313 Sum_probs=36.6
Q ss_pred CCcccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCCC---CCCcEEEEEEccCc
Q psy16587 56 ENLGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEEN---LGDIYLSATLYPRS 120 (130)
Q Consensus 56 ~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~~---~~dpyVk~~L~~~~ 120 (130)
...|+|+++|.|. .+ .|.|.+ +|+||++++ .+||||+++++...
T Consensus 4 ~~~G~i~~~l~y~--~~-------------------~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~ 51 (142)
T 1rh8_A 4 PITGEIQLQINYD--LG-------------------NLIIHILQARNLVPRDNNGYSDPFVKVYLLPGR 51 (142)
T ss_dssp CCCCEEEEEEEEE--TT-------------------EEEEEEEEEESCCCCSSSSCSCCEEEEEETTSS
T ss_pred CcceEEEEEEEEc--CC-------------------EEEEEEEEecCCCCCCCCCCCCceEEEEEecCC
Confidence 4579999999998 32 577777 999999765 78999999998753
No 52
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=98.42 E-value=3.6e-07 Score=66.26 Aligned_cols=38 Identities=18% Similarity=0.253 Sum_probs=32.7
Q ss_pred CcCCCCceEEEEEEeCCCCCCCCcceEEEEeCccccCCc
Q psy16587 2 PETTSGLVVELQVFDYDWGLQDDFMGSASIDLTTLELGR 40 (130)
Q Consensus 2 ~~~~~~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~ 40 (130)
.+.+....|.|+|||+| +++||+||++.|||+++....
T Consensus 64 ~v~~~~~~L~~~V~D~d-~~~dd~iG~~~i~L~~l~~~~ 101 (167)
T 2cjs_A 64 EINRLDLGLTVEVWNKG-LIWDTMVGTVWIPLRTIRQSN 101 (167)
T ss_dssp ECCCTTSEEEEEEEECC-SSCCEEEEEEEEEGGGSCBCS
T ss_pred EeeCCCCEEEEEEEECC-CCCCceEEEEEEEHHHhcccC
Confidence 45667788999999999 889999999999999986543
No 53
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.41 E-value=2.6e-07 Score=63.94 Aligned_cols=45 Identities=16% Similarity=0.182 Sum_probs=39.7
Q ss_pred ceEEEEEEeCCCCCC--CCcceEEEEeCccccCCceeEEEEecCCCC
Q psy16587 8 LVVELQVFDYDWGLQ--DDFMGSASIDLTTLELGRCTDLILTLEDPN 52 (130)
Q Consensus 8 ~~L~~~V~D~D~~~~--dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~ 52 (130)
..|.|.|||+|.+.+ ||+||++.|+|+++..+...+.|++|.+..
T Consensus 91 ~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~ 137 (142)
T 2dmg_A 91 RTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDS 137 (142)
T ss_dssp CEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSC
T ss_pred CEEEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccCCC
Confidence 589999999998743 579999999999999988889999998754
No 54
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=98.40 E-value=6.2e-07 Score=75.98 Aligned_cols=49 Identities=27% Similarity=0.464 Sum_probs=43.8
Q ss_pred CCceEEEEEEeCCCCCCCCcceEEEEeCccccCCceeEEEEecCCCCCCCCCcccEEEEEE
Q psy16587 6 SGLVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCTDLILTLEDPNKPEENLGDIYLSAT 66 (130)
Q Consensus 6 ~~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~~~~~~~G~I~l~L~ 66 (130)
..++|.|+|||+|.+++||+||++.++|. .+..+.|++|+. |.|+++++
T Consensus 453 ~~~~L~~~V~D~D~~~~dD~LG~~~~~L~----~g~~~~~~~l~~--------G~l~~~~~ 501 (540)
T 3nsj_A 453 TGGPLRVQVWDADYGWDDDLLGSCDRSPH----SGFHEVTCELNH--------GRVKFSYH 501 (540)
T ss_dssp TCCCEEEEEEECCSSSCCEEEEEEEECCC----SEEEEEEEECSS--------SEEEEEEE
T ss_pred CCCEEEEEEEECCCCCCCCEEEEEEEEee----CCcEEEEEEcCC--------eEEEEEEE
Confidence 67889999999999999999999999998 356789999876 99999886
No 55
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=98.38 E-value=6.6e-07 Score=68.37 Aligned_cols=52 Identities=21% Similarity=0.354 Sum_probs=41.9
Q ss_pred CCcccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCCC---CCCcEEEEEEccC---cccccce
Q psy16587 56 ENLGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEEN---LGDIYLSATLYPR---SQEDRDQ 126 (130)
Q Consensus 56 ~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~~---~~dpyVk~~L~~~---~~~s~~~ 126 (130)
+..|+|+++|.|.|..+ .|.|.| +|+||+.++ .+||||++++++. .++++++
T Consensus 3 ~~~G~l~~~l~y~~~~~-------------------~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~ 61 (284)
T 2r83_A 3 EKLGKLQYSLDYDFQNN-------------------QLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVH 61 (284)
T ss_dssp CCCCEEEEEEEEETTTT-------------------EEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCC
T ss_pred cceeEEEEEEEEECCCC-------------------EEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcc
Confidence 46799999999999875 678888 999999764 7899999999754 3445543
No 56
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=98.35 E-value=9.1e-07 Score=61.34 Aligned_cols=53 Identities=11% Similarity=0.100 Sum_probs=41.3
Q ss_pred CCCcccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCCCCCCcEEEEEEccC----cccccce
Q psy16587 55 EENLGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEENLGDIYLSATLYPR----SQEDRDQ 126 (130)
Q Consensus 55 ~~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~~~~dpyVk~~L~~~----~~~s~~~ 126 (130)
....|+|+++|.|.+..+ .|.|.+ +|++....+.+||||++++.+. .++++++
T Consensus 9 ~~~~G~l~~sl~y~~~~~-------------------~L~V~v~~a~~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~ 66 (138)
T 1wfm_A 9 WNQAPKLHYCLDYDCQKA-------------------ELFVTRLEAVTSNHDGGCDCYVQGSVANRTGSVEAQTALK 66 (138)
T ss_dssp CSSCCEEEEEEEEETTTT-------------------EEEEEEEEEECCCCSSCCCEEEEEEEEETTEEEEEECCCC
T ss_pred CCcceEEEEEEEEeCCCC-------------------EEEEEEEEEEcCCCCCCcceEEEEEEEcCCCcccEecccC
Confidence 356799999999999875 677777 9997655668999999999653 3455553
No 57
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=98.35 E-value=3.8e-07 Score=62.43 Aligned_cols=42 Identities=14% Similarity=0.107 Sum_probs=35.5
Q ss_pred ceEEEEEEeCCCCCCCCcceEEEEeCcccc------------CCceeEEEEecC
Q psy16587 8 LVVELQVFDYDWGLQDDFMGSASIDLTTLE------------LGRCTDLILTLE 49 (130)
Q Consensus 8 ~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~------------~~~~~~~~~~L~ 49 (130)
..|.|.|||+|.+++||+||++.|+|+++. +++....|..|.
T Consensus 84 ~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~~~Wh~L~ 137 (138)
T 3n5a_A 84 TTIIITVMDKDKLSRNDVIGKIYLSWKSGPGEVKHWKDMIARPRQPVAQWHQLK 137 (138)
T ss_dssp EEEEEEEEECCSSSCCEEEEEEEESSSSCHHHHHHHHHHHHSTTCCEEEEEECB
T ss_pred eEEEEEEEECCCCCCCcEEEEEEEccccCChHHHHHHHHHhCCCCeEEEEeecC
Confidence 689999999999999999999999999754 456667777665
No 58
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=98.35 E-value=7.2e-08 Score=80.27 Aligned_cols=67 Identities=15% Similarity=0.165 Sum_probs=13.2
Q ss_pred CCCceEEEEEEe-CC---CCCCCCcceEEEEeCccccCCceeEEEEecCCCCC----------------------CCCCc
Q psy16587 5 TSGLVVELQVFD-YD---WGLQDDFMGSASIDLTTLELGRCTDLILTLEDPNK----------------------PEENL 58 (130)
Q Consensus 5 ~~~~~L~~~V~D-~D---~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~~----------------------~~~~~ 58 (130)
.....|.|.||| +| ++++||+||++.|||+++..++..+.|++|.++.. .....
T Consensus 67 ~~~~~L~v~V~d~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 146 (483)
T 3bxj_A 67 PAVRALRLHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGC 146 (483)
T ss_dssp ----------------------------------------CCEECC----------------------------------
T ss_pred CCccEEEEEEEecCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCC
Confidence 345789999999 56 47899999999999999999889999999965432 12357
Q ss_pred ccEEEEEEEecCc
Q psy16587 59 GDIYLSATLYPRS 71 (130)
Q Consensus 59 G~I~l~L~~~p~~ 71 (130)
|.|+|+++|.+..
T Consensus 147 G~lrL~v~~~~~~ 159 (483)
T 3bxj_A 147 PAVRLKARYQTMS 159 (483)
T ss_dssp ----CEEEEEECC
T ss_pred ceEEEEEEeeeee
Confidence 9999999998854
No 59
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=98.34 E-value=6.5e-07 Score=69.37 Aligned_cols=52 Identities=15% Similarity=0.303 Sum_probs=42.2
Q ss_pred CCcccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCCC---CCCcEEEEEEc---cCcccccce
Q psy16587 56 ENLGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEEN---LGDIYLSATLY---PRSQEDRDQ 126 (130)
Q Consensus 56 ~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~~---~~dpyVk~~L~---~~~~~s~~~ 126 (130)
+.+|+|+++|.|.+..+ .|.|.| +|+||+.++ .+||||++++. ...++++++
T Consensus 4 ~~~G~l~~~l~y~~~~~-------------------~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~ 62 (296)
T 1dqv_A 4 APCGRISFALRYLYGSD-------------------QLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVH 62 (296)
T ss_dssp CSSCEEEEEEECCSSSC-------------------EEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCC
T ss_pred CeeeEEEEEEEEeCCCC-------------------EEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCcc
Confidence 56899999999999875 678888 999999765 78999999994 445566654
No 60
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=98.30 E-value=1.1e-06 Score=62.60 Aligned_cols=46 Identities=20% Similarity=0.468 Sum_probs=38.3
Q ss_pred CceEEEEEEeCCCCCCCCcceEEEEeCccc------------cCCceeEEEEecCCCC
Q psy16587 7 GLVVELQVFDYDWGLQDDFMGSASIDLTTL------------ELGRCTDLILTLEDPN 52 (130)
Q Consensus 7 ~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v------------~~~~~~~~~~~L~~~~ 52 (130)
...|.|.|||+|.+++||+||++.|+|+++ ..++....|..|.+++
T Consensus 104 ~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~~~~Wh~L~~~~ 161 (166)
T 2cm5_A 104 KKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNEN 161 (166)
T ss_dssp GCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCCEEEEEECBC--
T ss_pred CCEEEEEEEECCCCCCCcEEEeEEEecccCCchhHHHHHHHhCCCCcceEeeECCCcc
Confidence 568999999999999999999999999975 2566778888887654
No 61
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=98.28 E-value=1.3e-06 Score=61.63 Aligned_cols=45 Identities=22% Similarity=0.202 Sum_probs=38.9
Q ss_pred CceEEEEEEeCCCCCCCCcceEEEEeCccc------------cCCceeEEEEecCCC
Q psy16587 7 GLVVELQVFDYDWGLQDDFMGSASIDLTTL------------ELGRCTDLILTLEDP 51 (130)
Q Consensus 7 ~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v------------~~~~~~~~~~~L~~~ 51 (130)
...|.|.|||+|.+++||+||++.|+|+.+ .+.+..+.|++|..+
T Consensus 92 ~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~ 148 (159)
T 1tjx_A 92 KVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 148 (159)
T ss_dssp GCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCH
T ss_pred CcEEEEEEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCc
Confidence 467999999999999999999999999964 456778899999864
No 62
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=98.28 E-value=1.8e-06 Score=60.26 Aligned_cols=50 Identities=28% Similarity=0.448 Sum_probs=38.9
Q ss_pred CCcccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCCC---CCCcEEEEEEcc-----Ccccccce
Q psy16587 56 ENLGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEEN---LGDIYLSATLYP-----RSQEDRDQ 126 (130)
Q Consensus 56 ~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~~---~~dpyVk~~L~~-----~~~~s~~~ 126 (130)
+..|+|++++.|. .+ .|.|.| +|+||+.++ .+||||++++.. ..++++++
T Consensus 17 ~~~G~l~~~l~~~--~~-------------------~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~ 75 (149)
T 1a25_A 17 ERRGRIYIQAHID--RE-------------------VLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTI 75 (149)
T ss_dssp CTTCEEEEEEEES--SS-------------------EEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCC
T ss_pred CcceEEEEEEEec--CC-------------------EEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEeccee
Confidence 4579999999984 22 577787 999999765 689999999985 45556554
No 63
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=98.26 E-value=1.1e-06 Score=63.25 Aligned_cols=43 Identities=14% Similarity=0.215 Sum_probs=34.6
Q ss_pred CCcccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCCC----CCCcEEEEEEccC
Q psy16587 56 ENLGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEEN----LGDIYLSATLYPR 119 (130)
Q Consensus 56 ~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~~----~~dpyVk~~L~~~ 119 (130)
+..|+|++++.| ..+ .|.|.+ +|+||+.++ .+||||++++.+.
T Consensus 16 ~~~G~l~~~l~y--~~~-------------------~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~ 63 (171)
T 2q3x_A 16 PAMGDIQIGMED--KKG-------------------QLEVEVIRARSLTQKPGSKSTPAPYVKVYLLEN 63 (171)
T ss_dssp -CCCEEEEEEEE--ETT-------------------EEEEEEEEEESCCCCC---CCCEEEEEEEEEET
T ss_pred CCccEEEEEEEE--CCC-------------------EEEEEEEEeeCCCCCCcCCCCCCceEEEEEECC
Confidence 456999999999 232 577877 999999653 6899999999875
No 64
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=98.09 E-value=4.5e-06 Score=58.39 Aligned_cols=29 Identities=24% Similarity=0.463 Sum_probs=27.3
Q ss_pred CceEEEEEEeCCCCCCCCcceEEEEeCcc
Q psy16587 7 GLVVELQVFDYDWGLQDDFMGSASIDLTT 35 (130)
Q Consensus 7 ~~~L~~~V~D~D~~~~dD~iG~~~i~L~~ 35 (130)
...|.|+|||+|++++||+||++.|+|+.
T Consensus 97 ~~~l~v~V~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 97 EISVEFLVLDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp TEEEEEEEEECCTTSCCEEEEEEEESTTC
T ss_pred ceEEEEEEEeCCCCCCCcEEEEEEECCCC
Confidence 36899999999999999999999999998
No 65
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=98.09 E-value=2.9e-06 Score=72.87 Aligned_cols=58 Identities=22% Similarity=0.397 Sum_probs=46.7
Q ss_pred ceEEEEEEeCCCCCCCCcceEEEEeCccccCCceeEEEEecCCCCCCCCCcccEEEEEEEe
Q psy16587 8 LVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCTDLILTLEDPNKPEENLGDIYLSATLY 68 (130)
Q Consensus 8 ~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~~~~~~~G~I~l~L~~~ 68 (130)
..|+|.|||+|++++||+||++.|||+.+..+. .|++|.+..+..-..|.|++.++|.
T Consensus 566 ~~L~~~V~D~D~~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 566 ALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGY---RHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEEGGGBCCEE---EEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred CEEEEEEEEcCCCCCCceeEEEEEEHHHcCCCc---EEEeCCCCCcCCCCceEEEEEEEEE
Confidence 589999999999999999999999999998653 4889987654222357788877764
No 66
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=97.80 E-value=4e-05 Score=52.74 Aligned_cols=35 Identities=11% Similarity=0.171 Sum_probs=26.2
Q ss_pred eEEEEE-eCCCCCC--CCCCCcEEEEEEcc-----Ccccccce
Q psy16587 92 DLILTL-EDPNKPE--ENLGDIYLSATLYP-----RSQEDRDQ 126 (130)
Q Consensus 92 ~l~V~l-~a~nL~~--~~~~dpyVk~~L~~-----~~~~s~~~ 126 (130)
.|.|.+ +|+||+. .+.+||||++++.+ ..++++++
T Consensus 21 ~L~V~V~~a~~L~~~~~g~~DPyv~v~l~~~~~~~~~~kT~v~ 63 (134)
T 2b3r_A 21 TLFIMVMHIKDLVTEDGADPNPYVKTYLLPDTHKTSKRKTKIS 63 (134)
T ss_dssp EEEEEEEEEECCCCTTSCCCCEEEEEEEESCSSSCCCEECCCC
T ss_pred EEEEEEEEeeCCCCCCCCCCCeEEEEEEEcCCCCCceecCCcC
Confidence 577777 9999995 34789999999943 44555554
No 67
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=97.79 E-value=1.6e-05 Score=55.10 Aligned_cols=42 Identities=10% Similarity=0.100 Sum_probs=31.8
Q ss_pred cccccceE-EEEE-eCCCCCCCC---CCCcEEEEEEccCccccccee
Q psy16587 86 YSQKCTDL-ILTL-EDPNKPEEN---LGDIYLSATLYPRSQEDRDQN 127 (130)
Q Consensus 86 ~s~~~~~l-~V~l-~a~nL~~~~---~~dpyVk~~L~~~~~~s~~~~ 127 (130)
..+.|++. .|.+ +|+||++++ .+||||+++++...++++++.
T Consensus 11 ~~~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~ 57 (148)
T 3kwu_A 11 GTSKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIY 57 (148)
T ss_dssp ----CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCC
T ss_pred cccccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccC
Confidence 45667765 8888 999999764 889999999998888887743
No 68
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=97.69 E-value=1.6e-05 Score=54.29 Aligned_cols=36 Identities=8% Similarity=0.004 Sum_probs=30.1
Q ss_pred eEEEEE-eCCCCCCCC---CCCcEEEEEEccCccccccee
Q psy16587 92 DLILTL-EDPNKPEEN---LGDIYLSATLYPRSQEDRDQN 127 (130)
Q Consensus 92 ~l~V~l-~a~nL~~~~---~~dpyVk~~L~~~~~~s~~~~ 127 (130)
.|.|.+ +|+||+.++ .+||||+++++...++++++.
T Consensus 14 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~ 53 (133)
T 2ep6_A 14 ILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVY 53 (133)
T ss_dssp EEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCS
T ss_pred EEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeec
Confidence 567888 999999765 789999999999888887653
No 69
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=97.69 E-value=1.6e-05 Score=69.74 Aligned_cols=44 Identities=16% Similarity=0.476 Sum_probs=40.8
Q ss_pred CCceEEEEEEeCCCCCCCCcceEEEEeCccccCCceeEEEEecCC
Q psy16587 6 SGLVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCTDLILTLED 50 (130)
Q Consensus 6 ~~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~ 50 (130)
....|+|+|||+|+++ ||+||++.|+|+++..+...+.|++|+.
T Consensus 83 ~~~~L~~~V~D~D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 83 QENVLEITLMDANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp SCCBCEEEEEECCSSS-CEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred CCCEEEEEEEECCCCC-CceeEEEEEEHHHcCCCCceEEEEecCC
Confidence 4578999999999998 9999999999999998888899999986
No 70
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.65 E-value=4.4e-05 Score=52.31 Aligned_cols=37 Identities=14% Similarity=0.178 Sum_probs=31.0
Q ss_pred ceEEEEE-eCCCCCCCC--CCCcEEEEEEccCccccccee
Q psy16587 91 TDLILTL-EDPNKPEEN--LGDIYLSATLYPRSQEDRDQN 127 (130)
Q Consensus 91 ~~l~V~l-~a~nL~~~~--~~dpyVk~~L~~~~~~s~~~~ 127 (130)
..|.|.| +|+||+.++ .+||||+++++...++++++.
T Consensus 7 g~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~~~~kT~v~~ 46 (140)
T 2dmh_A 7 GMLRVIVESASNIPKTKFGKPDPIVSVIFKDEKKKTKKVD 46 (140)
T ss_dssp CEEEEEEEEEESCCCCSSSCCCEEEEEECSSCEEECCCCC
T ss_pred cEEEEEEEEeeCCCCCCCCCCCeEEEEEECCEeEEeeeec
Confidence 3567888 999999765 889999999999888888753
No 71
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=97.51 E-value=7.3e-05 Score=50.21 Aligned_cols=35 Identities=9% Similarity=0.174 Sum_probs=27.8
Q ss_pred eEEEEE-eCCCCCCC------CCCCcEEEEEEcc---Ccccccce
Q psy16587 92 DLILTL-EDPNKPEE------NLGDIYLSATLYP---RSQEDRDQ 126 (130)
Q Consensus 92 ~l~V~l-~a~nL~~~------~~~dpyVk~~L~~---~~~~s~~~ 126 (130)
.|.|.| +|+|||.+ +.+||||+++++. ..++++++
T Consensus 4 ~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~ 48 (126)
T 1rlw_A 4 KFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHF 48 (126)
T ss_dssp EEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCC
T ss_pred EEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEcccc
Confidence 357888 99999985 5899999999996 55566654
No 72
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=97.50 E-value=5.9e-05 Score=54.12 Aligned_cols=39 Identities=15% Similarity=0.160 Sum_probs=29.2
Q ss_pred cccceE-EEEE-eCCCCCCCC-------------CCCcEEEEEEccCc-ccccce
Q psy16587 88 QKCTDL-ILTL-EDPNKPEEN-------------LGDIYLSATLYPRS-QEDRDQ 126 (130)
Q Consensus 88 ~~~~~l-~V~l-~a~nL~~~~-------------~~dpyVk~~L~~~~-~~s~~~ 126 (130)
.+..+. .|.| +|+||++++ .+||||+++|+... .+++++
T Consensus 25 ~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~ 79 (157)
T 2fk9_A 25 MKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTK 79 (157)
T ss_dssp CCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCC
T ss_pred ccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeec
Confidence 344555 8888 999999765 58999999997654 466654
No 73
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=97.41 E-value=0.00014 Score=49.48 Aligned_cols=35 Identities=14% Similarity=0.175 Sum_probs=27.2
Q ss_pred eEEEEE-eCCCCCCCC---CCCcEEEEEEcc--Ccccccce
Q psy16587 92 DLILTL-EDPNKPEEN---LGDIYLSATLYP--RSQEDRDQ 126 (130)
Q Consensus 92 ~l~V~l-~a~nL~~~~---~~dpyVk~~L~~--~~~~s~~~ 126 (130)
.|.|.+ +|+||++++ .+||||++++.. ..++++++
T Consensus 6 ~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~ 46 (132)
T 3pyc_A 6 KIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTV 46 (132)
T ss_dssp EEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCC
T ss_pred EEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCcc
Confidence 677777 999999765 689999999976 44555554
No 74
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=97.36 E-value=0.0001 Score=63.17 Aligned_cols=46 Identities=24% Similarity=0.420 Sum_probs=40.0
Q ss_pred CCCceEEEEEEeCCCCCCCCcceEEEEeCccccCCceeEEEEecCCC
Q psy16587 5 TSGLVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCTDLILTLEDP 51 (130)
Q Consensus 5 ~~~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~ 51 (130)
+..+.|.|+|||+|++++||+||++.++|+++...+ .+.|..|...
T Consensus 236 ~~~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~ 281 (674)
T 3pfq_A 236 DKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAG-VDGWFKLLSQ 281 (674)
T ss_dssp TTTCEEEEEEEECCSSSCCEECCBCCCBTTHHHHCC-EEEEEECBCT
T ss_pred CccceeeeEEeecccccccccccccccchhhhccCC-cccceeeccc
Confidence 456789999999999999999999999999998765 4888888653
No 75
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=97.28 E-value=0.00015 Score=49.59 Aligned_cols=28 Identities=18% Similarity=0.159 Sum_probs=22.7
Q ss_pred eEEEEE-eCCCCCCCC--------------CCCcEEEEEEccC
Q psy16587 92 DLILTL-EDPNKPEEN--------------LGDIYLSATLYPR 119 (130)
Q Consensus 92 ~l~V~l-~a~nL~~~~--------------~~dpyVk~~L~~~ 119 (130)
.|.|.| +|+||++++ .+||||+++++..
T Consensus 7 ~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~ 49 (136)
T 1gmi_A 7 LLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDS 49 (136)
T ss_dssp EEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTE
T ss_pred EEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCe
Confidence 358888 999999765 2899999999654
No 76
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=97.25 E-value=0.001 Score=47.04 Aligned_cols=56 Identities=20% Similarity=0.359 Sum_probs=47.1
Q ss_pred CCCceEEEEEEeCCCCCCCCcceEEEEeCcccc-----CCceeEEEEecCCCCCCCCCcccEEEEEEEecCc
Q psy16587 5 TSGLVVELQVFDYDWGLQDDFMGSASIDLTTLE-----LGRCTDLILTLEDPNKPEENLGDIYLSATLYPRS 71 (130)
Q Consensus 5 ~~~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~-----~~~~~~~~~~L~~~~~~~~~~G~I~l~L~~~p~~ 71 (130)
..++.|+|.||.... ||+.+++|+++++- .++..+.|+.|++. |.|++.+.|.-..
T Consensus 72 ~~Gr~l~i~Vfh~a~----~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP~-------Gkl~v~i~~~~e~ 132 (138)
T 2enj_A 72 NKGRVMQIIVKGKNV----DLISETTVELYSLAERCRKNNGKTEIWLELKPQ-------GRMLMNARYFLEM 132 (138)
T ss_dssp CSSCEEEEEEECSSC----SCCEEEEEESHHHHHHHHHTTTCEEEEEECBSS-------CEEEEEEEECCCS
T ss_pred ECCeEEEEEEEcCCC----CeeeEEEEEHHHHHhhhccCCCceEEEEecccC-------cEEEEEEEEEEec
Confidence 467899999995433 99999999999998 56788999999973 9999999986533
No 77
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=97.21 E-value=0.00018 Score=48.91 Aligned_cols=36 Identities=17% Similarity=0.160 Sum_probs=30.1
Q ss_pred eEEEEE-eCCCCCCCC---CCCcEEEEEEccCccccccee
Q psy16587 92 DLILTL-EDPNKPEEN---LGDIYLSATLYPRSQEDRDQN 127 (130)
Q Consensus 92 ~l~V~l-~a~nL~~~~---~~dpyVk~~L~~~~~~s~~~~ 127 (130)
.|.|.+ +|+||+.++ .+||||+++++...+++++..
T Consensus 11 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~ 50 (136)
T 1wfj_A 11 TLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAE 50 (136)
T ss_dssp EEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCT
T ss_pred EEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEecc
Confidence 458888 999999765 789999999999888887654
No 78
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=97.20 E-value=0.00094 Score=46.61 Aligned_cols=53 Identities=11% Similarity=0.265 Sum_probs=45.6
Q ss_pred CCCceEEEEEEeCCCCCCCCcceEEEEeCcccc-----CCceeEEEEecCCCCCCCCCcccEEEEEEEe
Q psy16587 5 TSGLVVELQVFDYDWGLQDDFMGSASIDLTTLE-----LGRCTDLILTLEDPNKPEENLGDIYLSATLY 68 (130)
Q Consensus 5 ~~~~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~-----~~~~~~~~~~L~~~~~~~~~~G~I~l~L~~~ 68 (130)
..++.|+|.||.... ||+.+++|+++++- .++..+.|+.|++. |.|++.+.|.
T Consensus 67 ~~Gr~l~i~Vfh~a~----~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP~-------Gkl~~~i~~~ 124 (126)
T 1yrk_A 67 YEGRVIQIVLMRAAE----EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQPQ-------AKVLMSVQYF 124 (126)
T ss_dssp CTTCEEEEEEEEETT----EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBSS-------CEEEEEEEEE
T ss_pred eCCEEEEEEEEcCCC----CeeeEEEEEHHHHHhhhccCCCceEEEEecccC-------cEEEEEEEEe
Confidence 367899999996433 99999999999998 56788999999973 9999999875
No 79
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=97.08 E-value=0.00029 Score=50.28 Aligned_cols=27 Identities=19% Similarity=0.314 Sum_probs=21.3
Q ss_pred eEEEEE-eCCCCCCCC---CCCcEEEEEEcc
Q psy16587 92 DLILTL-EDPNKPEEN---LGDIYLSATLYP 118 (130)
Q Consensus 92 ~l~V~l-~a~nL~~~~---~~dpyVk~~L~~ 118 (130)
.|.|.| +|+||+.++ .+||||+++++.
T Consensus 9 ~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~ 39 (176)
T 3m7f_B 9 VVRVKVIAGIGLAKKDILGASDPYVRVTLYD 39 (176)
T ss_dssp EEEEEEEEEESCC---CCCCCCEEEEEEEEE
T ss_pred EEEEEEEEeeCCCCcCCCCCcCcEEEEEEEC
Confidence 458888 999999654 789999999987
No 80
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=97.06 E-value=0.00031 Score=48.75 Aligned_cols=27 Identities=19% Similarity=0.299 Sum_probs=20.5
Q ss_pred eEEEEE-eCCCCCCCC---CCCcEEEEEEcc
Q psy16587 92 DLILTL-EDPNKPEEN---LGDIYLSATLYP 118 (130)
Q Consensus 92 ~l~V~l-~a~nL~~~~---~~dpyVk~~L~~ 118 (130)
.|.|.+ +|+||+.++ .+||||+++++.
T Consensus 21 ~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~ 51 (153)
T 3b7y_A 21 IVRVRVIAGIGLAKKDILGASDPYVRVTLYD 51 (153)
T ss_dssp EEEEEEEEEESCC-------CCEEEEEEEEE
T ss_pred EEEEEEEEeeCCCCCCCCCCCCcEEEEEEEC
Confidence 458888 999999765 789999999985
No 81
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=96.97 E-value=0.00096 Score=59.49 Aligned_cols=55 Identities=11% Similarity=0.222 Sum_probs=44.4
Q ss_pred ceEEEEEEeCCCCCCCCcceEEEEeCccccCCceeEEEEecCCCCCCCCCcccEEEEEEEec
Q psy16587 8 LVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCTDLILTLEDPNKPEENLGDIYLSATLYP 69 (130)
Q Consensus 8 ~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~~~~~~~G~I~l~L~~~p 69 (130)
..|+|+|||+| |||||++.|||+.+..+ ..+++|.+..+..-..|.|.+.+++..
T Consensus 791 a~Lrf~V~D~d----ddfiG~~~lpL~~L~~G---yR~vpL~~~~g~~l~~atLfv~i~~~~ 845 (885)
T 3ohm_B 791 ASLRIAAFEEG----GKFVGHRILPVSAIRSG---YHYVCLRNEANQPLCLPALLIYTEASD 845 (885)
T ss_dssp CEEEEEEEETT----TEEEEEEEEETTTCCCE---EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred CEEEEEEEcCC----ccEEeeEEEEHHHcCCC---ceEEEecCCCCCccCceEEEEEEEEEe
Confidence 47999999998 89999999999999875 335788876653445789999998764
No 82
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=96.86 E-value=0.00058 Score=49.22 Aligned_cols=36 Identities=22% Similarity=0.240 Sum_probs=28.1
Q ss_pred eEEEEE-eCCCCC-CCC--CCCcEEEEEEccCccccccee
Q psy16587 92 DLILTL-EDPNKP-EEN--LGDIYLSATLYPRSQEDRDQN 127 (130)
Q Consensus 92 ~l~V~l-~a~nL~-~~~--~~dpyVk~~L~~~~~~s~~~~ 127 (130)
.|.|.| +|+||+ .++ .+||||+++++...++++++.
T Consensus 37 ~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~ 76 (173)
T 2nq3_A 37 QLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCN 76 (173)
T ss_dssp EEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCS
T ss_pred EEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccC
Confidence 467888 999999 433 589999999998777777653
No 83
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=96.70 E-value=0.0021 Score=56.62 Aligned_cols=53 Identities=15% Similarity=0.301 Sum_probs=39.3
Q ss_pred ceEEEEEEeCCCCCCCCcceEEEEeCccccCCceeEEEEecCCCCCCCCCcccEEEEEEE
Q psy16587 8 LVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCTDLILTLEDPNKPEENLGDIYLSATL 67 (130)
Q Consensus 8 ~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~~~~~~~G~I~l~L~~ 67 (130)
..|+|.|||+| ||+||.+.|||+.+..+ ..+++|.+..+..-..+.|++.+.+
T Consensus 745 ~~Lr~~V~D~d----~d~iG~~~ipl~~L~~G---~r~v~L~~~~g~~~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 745 ASLRVAVMEEG----NKFLGHRIIPINALNSG---YHHLCLHSESNMPLTMPALFIFLEM 797 (799)
T ss_dssp CEEEEEEEETT----TEEEEEEEEEGGGBCCE---EEEEEEECTTCCEEEEEEEEEEEEE
T ss_pred cEEEEEEEEeC----CCccceEeeehhhcCCC---cEEEeccCCCCCCCCceEEEEEEEE
Confidence 37999999998 89999999999999864 3467887754422234666666655
No 84
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=96.66 E-value=0.0028 Score=54.22 Aligned_cols=42 Identities=31% Similarity=0.491 Sum_probs=32.5
Q ss_pred CCcccEEEEEEEecCcchhhhccccccccccccccceEEEEE-eCCCCCCCC---CCCcEEEEEEcc
Q psy16587 56 ENLGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTL-EDPNKPEEN---LGDIYLSATLYP 118 (130)
Q Consensus 56 ~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l-~a~nL~~~~---~~dpyVk~~L~~ 118 (130)
+..|.|++++.+.+ + .|+|.+ +|+||++++ .+||||++++.+
T Consensus 158 ~~~g~i~~~~~~~~--~-------------------~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p 203 (674)
T 3pfq_A 158 ERRGRIYIQAHIDR--E-------------------VLIVVVRDAKNLVPMDPNGLSDPYVKLKLIP 203 (674)
T ss_dssp CCSCEEEEEEEECS--S-------------------EEEEEEEEEESCCCCSTTSSCCEEEEEEEES
T ss_pred cccccccccceecc--c-------------------eeeeeeecccccCCCCcccccCccccccccc
Confidence 45688888776642 2 467777 999999775 789999999944
No 85
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=96.49 E-value=0.004 Score=55.07 Aligned_cols=54 Identities=17% Similarity=0.279 Sum_probs=41.8
Q ss_pred ceEEEEEEeCCCCCCCCcceEEEEeCccccCCceeEEEEecCCCCCCCCCcccEEEEEEEe
Q psy16587 8 LVVELQVFDYDWGLQDDFMGSASIDLTTLELGRCTDLILTLEDPNKPEENLGDIYLSATLY 68 (130)
Q Consensus 8 ~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~~~~~~~G~I~l~L~~~ 68 (130)
..|+|.|||+| |||||.+.|||+.+..+- .+++|.+..+..-..+.|.+.+++.
T Consensus 717 a~Lrf~V~D~d----ddfiG~~~ipL~~L~~Gy---R~vpL~~~~g~~~~~atLfv~i~~~ 770 (816)
T 3qr0_A 717 AVVRIIVSEEN----GKFIGHRVMPLDGIKPGY---RHVPLRNESNRPLGLASVFAHIVAK 770 (816)
T ss_dssp CEEEEEEEETT----SCEEEEEEEESTTCCCEE---EEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred cEEEEEEEecC----CCeeeEEEEEHHHcCCcc---eEEEEeCCCCCCCCceEEEEEEEEE
Confidence 47999999986 899999999999998753 3678887655334457777777644
No 86
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=96.30 E-value=0.0026 Score=52.02 Aligned_cols=36 Identities=14% Similarity=0.174 Sum_probs=29.8
Q ss_pred eEEEEE-eCCCCCCCC---CCCcEEEEEEccCccccccee
Q psy16587 92 DLILTL-EDPNKPEEN---LGDIYLSATLYPRSQEDRDQN 127 (130)
Q Consensus 92 ~l~V~l-~a~nL~~~~---~~dpyVk~~L~~~~~~s~~~~ 127 (130)
.|.|.+ +|+||++++ .+||||+++++...++|+++.
T Consensus 388 ~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~ 427 (510)
T 3jzy_A 388 RLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQ 427 (510)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCS
T ss_pred eEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccC
Confidence 357888 999999664 789999999998888887753
No 87
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=96.23 E-value=0.0029 Score=53.54 Aligned_cols=35 Identities=11% Similarity=0.014 Sum_probs=29.3
Q ss_pred eEEEEE-eCCCCCCCC---CCCcEEEEEEccCccccccee
Q psy16587 92 DLILTL-EDPNKPEEN---LGDIYLSATLYPRSQEDRDQN 127 (130)
Q Consensus 92 ~l~V~l-~a~nL~~~~---~~dpyVk~~L~~~~~~s~~~~ 127 (130)
.|.|.+ +|+||++ + .+||||+++++....|++++.
T Consensus 395 ~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik 433 (540)
T 3nsj_A 395 HLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVW 433 (540)
T ss_dssp EEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBC
T ss_pred EEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeec
Confidence 457788 9999997 4 789999999998888888754
No 88
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=96.14 E-value=0.0026 Score=43.63 Aligned_cols=24 Identities=8% Similarity=0.063 Sum_probs=20.9
Q ss_pred eEEEEE-eCCCCCCCCCCCcEEEEE
Q psy16587 92 DLILTL-EDPNKPEENLGDIYLSAT 115 (130)
Q Consensus 92 ~l~V~l-~a~nL~~~~~~dpyVk~~ 115 (130)
.|.|.+ +|++|+..+.+||||+++
T Consensus 6 ~L~V~V~~A~~l~~~g~~DPYv~v~ 30 (131)
T 2cjt_A 6 LLCVGVKKAKFDGAQEKFNTYVTLK 30 (131)
T ss_dssp EEEEEEEEEECSSCGGGCEEEEEEE
T ss_pred EEEEEEEEeECCCCCCCcCeEEEEE
Confidence 457888 999998777899999999
No 89
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=95.44 E-value=0.0086 Score=42.87 Aligned_cols=32 Identities=9% Similarity=0.069 Sum_probs=24.2
Q ss_pred eEEEEE-eCCCCCCCCCCCcEEEEEEccCcccccc
Q psy16587 92 DLILTL-EDPNKPEENLGDIYLSATLYPRSQEDRD 125 (130)
Q Consensus 92 ~l~V~l-~a~nL~~~~~~dpyVk~~L~~~~~~s~~ 125 (130)
.|.|.+ +|++|+..+.+||||+++ +. .++++.
T Consensus 15 ~L~V~V~~A~~l~~~g~~DPYV~v~-~~-~~kt~~ 47 (167)
T 2cjs_A 15 LLCVGVKKAKFDGAQEKFNTYVTLK-VQ-NVESTT 47 (167)
T ss_dssp EEEEEEEEEECSSCGGGCEEEEEEE-ET-TEEEEC
T ss_pred EEEEEEEEEECCCCCCCCCeEEEEE-ec-ceEEEE
Confidence 457777 999998777899999999 33 344443
No 90
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=94.79 E-value=0.016 Score=41.24 Aligned_cols=34 Identities=21% Similarity=0.090 Sum_probs=30.2
Q ss_pred eEEEEE-eCCCCCCCCCCCcEEEEEEccCccccccee
Q psy16587 92 DLILTL-EDPNKPEENLGDIYLSATLYPRSQEDRDQN 127 (130)
Q Consensus 92 ~l~V~l-~a~nL~~~~~~dpyVk~~L~~~~~~s~~~~ 127 (130)
+|+|.| +|.||| +.+|||+|+++....+|+|+..
T Consensus 22 sL~V~l~~a~~Lp--g~~Dp~akv~FRg~k~kTkvi~ 56 (144)
T 3l9b_A 22 ALIVHLKTVSELR--GRADRIAKVTFRGQSFYSRVLE 56 (144)
T ss_dssp EEEEEEEEEESCC--SCEEEEEEEEETTEEEECCCEE
T ss_pred EEEEEEEEecCCC--CCCCCeEEEEEeccceeeEEec
Confidence 578888 999999 4799999999999999999875
No 91
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=94.57 E-value=0.022 Score=48.83 Aligned_cols=27 Identities=15% Similarity=0.170 Sum_probs=22.3
Q ss_pred eEEEEE-eCCCCCCCC-----CCCcEEEEEEcc
Q psy16587 92 DLILTL-EDPNKPEEN-----LGDIYLSATLYP 118 (130)
Q Consensus 92 ~l~V~l-~a~nL~~~~-----~~dpyVk~~L~~ 118 (130)
.|.|.| +|+|||.++ .+||||++.|..
T Consensus 498 ~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g 530 (624)
T 1djx_A 498 RLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHG 530 (624)
T ss_dssp EEEEEEEEEESCCCCSSCSSSCCCEEEEEEEES
T ss_pred EEEEEEEEcCCCCcccccccCCCCcEEEEEEec
Confidence 358888 999999654 689999999954
No 92
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=94.32 E-value=0.017 Score=50.65 Aligned_cols=35 Identities=9% Similarity=0.174 Sum_probs=27.5
Q ss_pred eEEEEE-eCCCCCC---CC---CCCcEEEEEEcc---Ccccccce
Q psy16587 92 DLILTL-EDPNKPE---EN---LGDIYLSATLYP---RSQEDRDQ 126 (130)
Q Consensus 92 ~l~V~l-~a~nL~~---~~---~~dpyVk~~L~~---~~~~s~~~ 126 (130)
.|.|.| +|+||+. ++ .+||||+++++. ..+|++++
T Consensus 19 ~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvi 63 (749)
T 1cjy_A 19 KFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHF 63 (749)
T ss_dssp EEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCC
T ss_pred EEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceE
Confidence 467877 9999998 53 899999999984 45566654
No 93
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=94.10 E-value=0.008 Score=49.77 Aligned_cols=34 Identities=18% Similarity=0.143 Sum_probs=1.1
Q ss_pred eEEEEE-eCCCCCCCCCCCcEEEEEEccC-ccccccee
Q psy16587 92 DLILTL-EDPNKPEENLGDIYLSATLYPR-SQEDRDQN 127 (130)
Q Consensus 92 ~l~V~l-~a~nL~~~~~~dpyVk~~L~~~-~~~s~~~~ 127 (130)
.|.|.| +|+||++++ ||||+++++.. ..|++++.
T Consensus 12 ~L~V~VieAk~L~~~d--dpYv~v~l~~~~~~kT~v~~ 47 (483)
T 3bxj_A 12 VLKLWIIEARELPPKK--RYYCELCLDDMLYARTTSKP 47 (483)
T ss_dssp CC------------------------------------
T ss_pred EEEEEEEEcCCcCCCC--CCeEEEEECCeEEeeeeEEe
Confidence 467777 999999987 99999999765 34566543
No 94
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=90.83 E-value=0.16 Score=44.95 Aligned_cols=26 Identities=8% Similarity=0.207 Sum_probs=22.1
Q ss_pred eEEEEE-eCCCCCCCCCCCcEEEEEEcc
Q psy16587 92 DLILTL-EDPNKPEENLGDIYLSATLYP 118 (130)
Q Consensus 92 ~l~V~l-~a~nL~~~~~~dpyVk~~L~~ 118 (130)
.|.|.| +|+|||.. .+||||++.|..
T Consensus 651 ~L~V~Visaq~L~~~-~~DPYV~V~l~g 677 (816)
T 3qr0_A 651 TIEIKIISAQFLSDK-QISSYVEVEMYG 677 (816)
T ss_dssp EEEEEEEEEECCCSS-CCCEEEEEEEES
T ss_pred EEEEEEEEcccCCCC-CCCCeEEEEEeC
Confidence 357777 99999975 689999999975
No 95
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=90.53 E-value=0.2 Score=44.06 Aligned_cols=26 Identities=19% Similarity=0.253 Sum_probs=21.6
Q ss_pred eEEEEE-eCCCCCCCCCCCcEEEEEEcc
Q psy16587 92 DLILTL-EDPNKPEENLGDIYLSATLYP 118 (130)
Q Consensus 92 ~l~V~l-~a~nL~~~~~~dpyVk~~L~~ 118 (130)
.|.|.| +|+|||.+ .+||||++.|..
T Consensus 679 ~L~V~Visa~~L~~~-~~DPYV~V~l~g 705 (799)
T 2zkm_X 679 TLSITVISGQFLSER-SVRTYVEVELFG 705 (799)
T ss_dssp EEEEEEEEEESCCSS-CCCEEEEEEEEC
T ss_pred eEEEEEEeccccCcc-CCCcEEEEEEEe
Confidence 467777 99999974 689999999953
No 96
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=90.15 E-value=0.23 Score=44.28 Aligned_cols=34 Identities=15% Similarity=0.263 Sum_probs=26.1
Q ss_pred eEEEEE-eCCCCCCCCCCCcEEEEEEcc------Ccccccce
Q psy16587 92 DLILTL-EDPNKPEENLGDIYLSATLYP------RSQEDRDQ 126 (130)
Q Consensus 92 ~l~V~l-~a~nL~~~~~~dpyVk~~L~~------~~~~s~~~ 126 (130)
.|.|.| +|+|||.. .+||||++.|.. ..+++|+.
T Consensus 726 ~L~V~Visaq~L~~~-~~DPYV~V~l~g~p~D~~~k~kTkvi 766 (885)
T 3ohm_B 726 ALRVKVISGQFLSDR-KVGIYVEVDMFGLPVDTRRKYRTRTS 766 (885)
T ss_dssp EEEEEEEEEESCCSS-CCCEEEEEEEESSTTTCBCCCCCCCC
T ss_pred EEEEEEEEeccCccc-CCCcEEEEEEeCCCcccccceeeEEe
Confidence 357777 99999975 689999999975 23566654
No 97
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=57.43 E-value=27 Score=24.67 Aligned_cols=61 Identities=10% Similarity=0.028 Sum_probs=44.3
Q ss_pred ceEEEEEEeCCCCCCCCcceEEEEeCccccCCc-eeEEEEecCCCCCCCCCcccEEEEEEEec
Q psy16587 8 LVVELQVFDYDWGLQDDFMGSASIDLTTLELGR-CTDLILTLEDPNKPEENLGDIYLSATLYP 69 (130)
Q Consensus 8 ~~L~~~V~D~D~~~~dD~iG~~~i~L~~v~~~~-~~~~~~~L~~~~~~~~~~G~I~l~L~~~p 69 (130)
..|.++++--. .+....||++.|+|..+-..+ ......+|.++.+..+..|.|...+++..
T Consensus 89 ~~l~lELhqa~-g~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 89 NTITLEVHQAY-STEYETIAACQLKFHEILEKSGRIFCTASLIGTKGDIPNFGTVEYWFRLRV 150 (156)
T ss_dssp CCEEEEEEEEC-SSCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCCTTSEEEEEEEEEEE
T ss_pred CCEEEEEEEee-CCCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCcceEEEEEEEEEEec
Confidence 36778888874 447779999999999987433 35556678776542257899998888754
No 98
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=41.10 E-value=80 Score=21.25 Aligned_cols=55 Identities=13% Similarity=0.248 Sum_probs=32.4
Q ss_pred CCCceEEEEEEeCCC--CCCCCcceEEEEe-CccccCCce-eEEEEecCCCCCCCCCcccEEEEEE
Q psy16587 5 TSGLVVELQVFDYDW--GLQDDFMGSASID-LTTLELGRC-TDLILTLEDPNKPEENLGDIYLSAT 66 (130)
Q Consensus 5 ~~~~~L~~~V~D~D~--~~~dD~iG~~~i~-L~~v~~~~~-~~~~~~L~~~~~~~~~~G~I~l~L~ 66 (130)
|....+.|.||-=++ ...+.+||+..|. +.....+.+ .++.+.++.. |.|+++..
T Consensus 42 d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~~I~V~f~id~n-------GiL~V~a~ 100 (152)
T 2op6_A 42 DSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEIDVN-------GILHVSAE 100 (152)
T ss_dssp TTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCSCEEEEEEECTT-------SCEEEEEE
T ss_pred CCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCceEEEEEEECCC-------cEEEEEEE
Confidence 445568999996443 2347789988875 322222322 5555555542 77776665
No 99
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=40.05 E-value=94 Score=21.75 Aligned_cols=81 Identities=12% Similarity=0.065 Sum_probs=51.5
Q ss_pred EEEEEEeCCCCC--CCCcceEEEEeCccccCCceeEEEEecCCCCCCCCCccc-EEEEEEEecCcchhhhcccccccccc
Q psy16587 10 VELQVFDYDWGL--QDDFMGSASIDLTTLELGRCTDLILTLEDPNKPEENLGD-IYLSATLYPRSQEDRDQEASGTSESY 86 (130)
Q Consensus 10 L~~~V~D~D~~~--~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~~~~~~~G~-I~l~L~~~p~~~~~~~~~~~~~~~~~ 86 (130)
+.|.+-..+.|. .+|+.-.+.|+|.+.-++...+. +--+ |. +.+. .-+-.+
T Consensus 78 v~i~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v--~tld--------G~~v~i~--ip~~t~-------------- 131 (180)
T 2q2g_A 78 LIIQTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPV--TTLD--------NRNLQIP--IKEIVN-------------- 131 (180)
T ss_dssp EEEEECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEE--ECTT--------CCEEEEE--ECSCCC--------------
T ss_pred EEEEEEecccEEEcCCEEEEEEEcCHHHHhCCCEEEe--eCCC--------CCEEEEE--CCCccC--------------
Confidence 455555656664 68999999999999888765443 3223 54 4443 222111
Q ss_pred ccccceEEEEEeCCCCCCC----CCCCcEEEEEEccCc
Q psy16587 87 SQKCTDLILTLEDPNKPEE----NLGDIYLSATLYPRS 120 (130)
Q Consensus 87 s~~~~~l~V~l~a~nL~~~----~~~dpyVk~~L~~~~ 120 (130)
++-.+.|+++.+|.. ..+|.||+|.+..-.
T Consensus 132 ----~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~ 165 (180)
T 2q2g_A 132 ----PKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPK 165 (180)
T ss_dssp ----TTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCS
T ss_pred ----CCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCC
Confidence 122556689999953 258999999987543
No 100
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=40.02 E-value=45 Score=21.60 Aligned_cols=69 Identities=14% Similarity=0.134 Sum_probs=44.8
Q ss_pred CCCcceEEEEeCccccCCceeEEEEecCCCCCCCCCcccEEEEEEEecCcchhhhccccccccccccccceEEEEEeCCC
Q psy16587 22 QDDFMGSASIDLTTLELGRCTDLILTLEDPNKPEENLGDIYLSATLYPRSQEDRDQEASGTSESYSQKCTDLILTLEDPN 101 (130)
Q Consensus 22 ~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~~~~~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s~~~~~l~V~l~a~n 101 (130)
.+|+.-.+.|+|.+.-.+...++ +.-+ |.+ .+..-|-.. .+-.+.|+++.
T Consensus 11 G~DL~~~~~Isl~eAl~G~~i~v--~tld--------G~~--~v~ip~g~~------------------~G~~~rl~G~G 60 (109)
T 3i38_A 11 GHNLEIVLPLAPWEAALGAKVTV--PTLK--------ESI--LLTVPPGSQ------------------AGQRLRIKGKG 60 (109)
T ss_dssp TTEEEEEEEECHHHHHHCEEEEE--CCSS--------SCE--EEEECTTCC------------------TTCEEEETTCS
T ss_pred CCEEEEEEEcCHHHHhCCCEEEE--EcCC--------CCE--EEeeCCCcC------------------cCeEEEECCcc
Confidence 57999999999999888765443 2222 654 444444221 12255668888
Q ss_pred CCCC-CCCCcEEEEEEccCc
Q psy16587 102 KPEE-NLGDIYLSATLYPRS 120 (130)
Q Consensus 102 L~~~-~~~dpyVk~~L~~~~ 120 (130)
+|.. ..+|.||+|.+..-.
T Consensus 61 ~p~~~~~GDL~v~~~V~~P~ 80 (109)
T 3i38_A 61 LVSKTHTGDLFAVIKIVMPT 80 (109)
T ss_dssp CBCSSCBCCEEEEEEECCCS
T ss_pred CCCCCCCcCEEEEEEEECCC
Confidence 8853 368999999986443
No 101
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=34.38 E-value=1.2e+02 Score=21.25 Aligned_cols=83 Identities=16% Similarity=0.087 Sum_probs=52.4
Q ss_pred eEEEEEEeCCCCC--CCCcceEEEEeCccccCCceeEEEEecCCCCCCCCCccc-EEEEEEEecCcchhhhccccccccc
Q psy16587 9 VVELQVFDYDWGL--QDDFMGSASIDLTTLELGRCTDLILTLEDPNKPEENLGD-IYLSATLYPRSQEDRDQEASGTSES 85 (130)
Q Consensus 9 ~L~~~V~D~D~~~--~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~~~~~~~G~-I~l~L~~~p~~~~~~~~~~~~~~~~ 85 (130)
.+.|.+-..+.|. .+|+.-.+.|+|.+.-++...+. +.-+ |. +.+.+ -+-.+
T Consensus 77 ~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v--~tld--------G~~~~i~i--~~~t~------------- 131 (181)
T 3agx_A 77 VFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNV--PTLD--------GRTIPVVF--KDVIR------------- 131 (181)
T ss_dssp EEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEE--ECTT--------SCEEEEEE--CSCCC-------------
T ss_pred EEEEEEeccccceeeCCcEEEEEEcCHHHHhCCCEEEe--ECCC--------CCEEEEEC--CCccC-------------
Confidence 3555565656663 68899999999999888765544 3223 64 44443 22111
Q ss_pred cccccceEEEEEeCCCCCCC----CCCCcEEEEEEccCcc
Q psy16587 86 YSQKCTDLILTLEDPNKPEE----NLGDIYLSATLYPRSQ 121 (130)
Q Consensus 86 ~s~~~~~l~V~l~a~nL~~~----~~~dpyVk~~L~~~~~ 121 (130)
++-.+.|+++.+|.. ..+|.||+|.+..-..
T Consensus 132 -----~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ 166 (181)
T 3agx_A 132 -----PGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPER 166 (181)
T ss_dssp -----TTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSC
T ss_pred -----CCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCC
Confidence 123556689999953 2589999999865433
No 102
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=34.01 E-value=57 Score=25.38 Aligned_cols=81 Identities=12% Similarity=0.078 Sum_probs=51.7
Q ss_pred EEEEEEeCCCCC--CCCcceEEEEeCccccCCceeEEEEecCCCCCCCCCcccEEEEEEEecCcchhhhccccccccccc
Q psy16587 10 VELQVFDYDWGL--QDDFMGSASIDLTTLELGRCTDLILTLEDPNKPEENLGDIYLSATLYPRSQEDRDQEASGTSESYS 87 (130)
Q Consensus 10 L~~~V~D~D~~~--~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~~~~~~~G~I~l~L~~~p~~~~~~~~~~~~~~~~~s 87 (130)
+.|.|-..+.|. .+|+.-.+.|+|.+.-++...++ +--+ |.+ .|..-|-.+
T Consensus 217 v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~V--ptLd--------G~v--~l~ip~gt~--------------- 269 (329)
T 3lz8_A 217 LVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTV--PTLK--------ESI--LLTVPPGSQ--------------- 269 (329)
T ss_dssp EEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEE--CCSS--------SCE--EEEECTTCC---------------
T ss_pred EEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEE--ECCC--------CCE--EEEECCCCC---------------
Confidence 444455555553 67899999999998888765443 2223 665 444444322
Q ss_pred cccceEEEEEeCCCCCCC-CCCCcEEEEEEccCc
Q psy16587 88 QKCTDLILTLEDPNKPEE-NLGDIYLSATLYPRS 120 (130)
Q Consensus 88 ~~~~~l~V~l~a~nL~~~-~~~dpyVk~~L~~~~ 120 (130)
++-.+.|+++.+|.. ..+|.||+|.+.--.
T Consensus 270 ---~g~~~rl~G~GmP~~~~rGDL~v~~~V~~P~ 300 (329)
T 3lz8_A 270 ---AGQRLRIKGKGLVSKTHTGDLFAVIKIVMPT 300 (329)
T ss_dssp ---TTCEEEETTCSCBCSSCBCCEEEEEEECCCS
T ss_pred ---CCCEEEEcCCCCCCCCCCCCEEEEEEEECCC
Confidence 122556689999964 478999999986543
No 103
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=31.99 E-value=1.1e+02 Score=20.30 Aligned_cols=57 Identities=14% Similarity=0.205 Sum_probs=32.0
Q ss_pred CCCCceEEEEEEeCCC--CCCCCcceEEEEeC-ccccCCc-eeEEEEecCCCCCCCCCcccEEEEEEE
Q psy16587 4 TTSGLVVELQVFDYDW--GLQDDFMGSASIDL-TTLELGR-CTDLILTLEDPNKPEENLGDIYLSATL 67 (130)
Q Consensus 4 ~~~~~~L~~~V~D~D~--~~~dD~iG~~~i~L-~~v~~~~-~~~~~~~L~~~~~~~~~~G~I~l~L~~ 67 (130)
.|....+.|.||-=++ ...+..||+..+.. .....+. ..+..+.++.. |.|.++..-
T Consensus 58 ~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~p~G~~~IeVtf~iD~n-------GiL~V~a~d 118 (135)
T 1q5l_A 58 EDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDAD-------GILHVSAKD 118 (135)
T ss_dssp SSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSCCSSSCCEEEEEEECTT-------SEEEEEEEE
T ss_pred cCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCCCCceeEEEEEEEECCC-------CEEEEEEEE
Confidence 3455568999996443 34577899877542 2112222 24555555432 666666543
No 104
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=27.43 E-value=1.2e+02 Score=22.33 Aligned_cols=83 Identities=20% Similarity=0.197 Sum_probs=51.7
Q ss_pred eEEEEEEeCCCCC--CCCcceEEEEeCccccCCceeEEEEecCCCCCCCCCccc-EEEEEEEecC--cchhhhccccccc
Q psy16587 9 VVELQVFDYDWGL--QDDFMGSASIDLTTLELGRCTDLILTLEDPNKPEENLGD-IYLSATLYPR--SQEDRDQEASGTS 83 (130)
Q Consensus 9 ~L~~~V~D~D~~~--~dD~iG~~~i~L~~v~~~~~~~~~~~L~~~~~~~~~~G~-I~l~L~~~p~--~~~~~~~~~~~~~ 83 (130)
.+.|.|-..+.|. .+|++=.+.|+|.+.-++...++. .|+ |. +.| ..-|- .+
T Consensus 146 ~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~-tld---------G~~~~i--~ip~g~vt~----------- 202 (248)
T 1nlt_A 146 VFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALE-HVS---------GDWLKV--GIVPGEVIA----------- 202 (248)
T ss_dssp EEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCBCCEEE-CSS---------SCEEEC--CBCTTTTCS-----------
T ss_pred EEEEEEecCccceeeCCEEEEEEEeCHHHHhcCCEEEEe-CCC---------CCEEEE--EeCCCCeeC-----------
Confidence 3555555666664 678999999999988887655542 232 53 333 22221 11
Q ss_pred cccccccceEEEEEeCCCCCCC---CCCCcEEEEEEccCcc
Q psy16587 84 ESYSQKCTDLILTLEDPNKPEE---NLGDIYLSATLYPRSQ 121 (130)
Q Consensus 84 ~~~s~~~~~l~V~l~a~nL~~~---~~~dpyVk~~L~~~~~ 121 (130)
+.-.+.|+++.+|.. ...|.||+|.+..-..
T Consensus 203 -------~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~ 236 (248)
T 1nlt_A 203 -------PGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPEN 236 (248)
T ss_dssp -------TTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC-
T ss_pred -------CCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCC
Confidence 123566689999954 3689999999865443
No 105
>3uaf_A TTR-52; beta barrel/sandwich, cell engulfment, secreted, protein BIN; 2.01A {Caenorhabditis elegans}
Probab=20.31 E-value=20 Score=24.01 Aligned_cols=22 Identities=27% Similarity=0.412 Sum_probs=16.3
Q ss_pred eEEEEEEeCCCC--CCCCcceEEE
Q psy16587 9 VVELQVFDYDWG--LQDDFMGSAS 30 (130)
Q Consensus 9 ~L~~~V~D~D~~--~~dD~iG~~~ 30 (130)
..++++||.|.. ..||+|++..
T Consensus 22 ~V~V~L~d~~~~~~d~Ddll~~~~ 45 (117)
T 3uaf_A 22 KVHIDLWDAAAAAAESDDLMGRTW 45 (117)
T ss_dssp SCEEEEEEHHHHHTTSCCEEEEEE
T ss_pred CEEEEEEecccccCCchHhheeeE
Confidence 578889996643 4688999864
Done!