RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16607
(677 letters)
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT
{Human (Homo sapiens) [TaxId: 9606]}
Length = 388
Score = 98.6 bits (244), Expect = 1e-22
Identities = 66/394 (16%), Positives = 140/394 (35%), Gaps = 31/394 (7%)
Query: 294 LFE--YLYHHENDVASAMDLAVESTKACEFRDWWWKVQLGKCYFSLGLIREAQQQFNSAL 351
E + + D +A ++ + + L +F + + A+
Sbjct: 2 PMELAHREYQAGDFEAAERHCMQLWRQEPDNTGVL-LLLSSIHFQCRRLDRSAHFSTLAI 60
Query: 352 NQF-TDIEAFIRMIRVYIRLDQPIRAIDIGRNALDCYPNEVTIMTEMARIFEGLNNMPMS 410
Q EA+ + VY Q AI+ R+AL P+ + +A +M +
Sbjct: 61 KQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGA 120
Query: 411 VKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCF 470
V+ Y L+ + + +G + E A Y + ++ A ++NL
Sbjct: 121 VQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFN 180
Query: 471 YSQQYDMVVTCFERALSLALNENAADVWYNISHVAILNALSTSVYNDQPEVALLFYRRLL 530
+ + + FE+A+ L+ N D + N+ +V + A+ Y R L
Sbjct: 181 AQGEIWLAIHHFEKAV--TLDPNFLDAYINLGNVLK--------EARIFDRAVAAYLRAL 230
Query: 531 QMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHV-------- 582
+ +A + NLA + D+ + + RA+ L + D + N+++
Sbjct: 231 SLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAI--ELQPHFPDAYCNLANALKEKGSVA 288
Query: 583 -------AIITECSPFSFSTHTSYLFIQGISDTRLAIQCLHLALSIDSSHGLSQNNLAVL 635
+ C + S + + + A++ AL + + +NLA +
Sbjct: 289 EAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 348
Query: 636 EAREGHIERASTYLQAAAASSPYLYETHYNQAVI 669
++G ++ A + + A SP + + N
Sbjct: 349 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNT 382
Score = 41.6 bits (96), Expect = 3e-04
Identities = 19/125 (15%), Positives = 34/125 (27%), Gaps = 2/125 (1%)
Query: 283 KYARDKTVAKYLFEYLYHHENDVASAMDLAVESTKACEFRDWWWKVQLGKCYFSLGLIRE 342
+ A + VA A D + L G I E
Sbjct: 265 ELQPHFPDAYCNLANALKEKGSVAEAEDC-YNTALRLCPTHADSLNNLANIKREQGNIEE 323
Query: 343 AQQQFNSALNQF-TDIEAFIRMIRVYIRLDQPIRAIDIGRNALDCYPNEVTIMTEMARIF 401
A + + AL F A + V + + A+ + A+ P + M
Sbjct: 324 AVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTL 383
Query: 402 EGLNN 406
+ + +
Sbjct: 384 KEMQD 388
Score = 26.9 bits (58), Expect = 8.0
Identities = 7/41 (17%), Positives = 12/41 (29%)
Query: 18 AVDHFHKRNFEKCAAICTELLAKNPYDKAAWTLKMRSLTSQ 58
A + +FE C +L + P + L
Sbjct: 6 AHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQC 46
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase
alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 315
Score = 55.0 bits (131), Expect = 9e-09
Identities = 27/226 (11%), Positives = 73/226 (32%), Gaps = 6/226 (2%)
Query: 358 EAFIRMIRVYIRLDQPIRAIDIGRNALDCYPNEVTIMTEMARIFEGLN-NMPMSVKYYKL 416
+ + V R ++ RA + R+A++ T+ + + L ++ + Y
Sbjct: 44 DVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITA 103
Query: 417 ILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYD 476
I++ + V + P L F +L N + + + +D
Sbjct: 104 IIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWD 163
Query: 477 MVVTCFERALSLALNENAADVWYNISHVAILNALSTSVYNDQPEVALLFYRRLLQMGLYN 536
+ ++ L + VW V ++ + E + + ++++ +N
Sbjct: 164 NELQYVDQLLK--EDVRNNSVWNQRYFV--ISNTTGYNDRAVLEREVQYTLEMIKLVPHN 219
Query: 537 AELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHV 582
+N L + + L L + ++ + + +
Sbjct: 220 ESAWNYLKGILQD-RGLSKYPNLLNQLLDLQPSHSSPYLIAFLVDI 264
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III
{Escherichia coli [TaxId: 562]}
Length = 366
Score = 54.2 bits (128), Expect = 2e-08
Identities = 22/302 (7%), Positives = 61/302 (20%), Gaps = 31/302 (10%)
Query: 297 YLYHHENDVASAMDLAVESTKACEFRDWWWKVQ----LGKCYFSLGLIREAQQQFNSAL- 351
+ ++ + A LA + + ++ ++ LG+ G + +
Sbjct: 20 QVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQ 79
Query: 352 ------NQFTDIEAFIRMIRVYIRLDQPIRAIDIGRNALDCYP--------NEVTIMTEM 397
+ + I+ + A + A ++
Sbjct: 80 MARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIR 139
Query: 398 ARIFEGLNNMPMSVKYYK---LILKRDATCMEAIACIGVNHFYN---------DQPEVAL 445
A++ + + + +L + + Q
Sbjct: 140 AQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLE 199
Query: 446 LFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVA 505
+ + + + N +
Sbjct: 200 NLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIAR 259
Query: 506 ILNALSTSVYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALS 565
L + L R L++ L + + + AL
Sbjct: 260 AQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALK 319
Query: 566 LA 567
LA
Sbjct: 320 LA 321
Score = 28.7 bits (62), Expect = 2.3
Identities = 22/218 (10%), Positives = 51/218 (23%), Gaps = 12/218 (5%)
Query: 458 NAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAILNALSTSVYND 517
+AE A D + A L ++ + L
Sbjct: 11 HAEFNALRAQVAINDGNPDEAERLAKLA--LEELPPGWFYSRIVATSVLGEVL---HCKG 65
Query: 518 QPEVALLFYRRLLQMG------LYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNEN 571
+ +L ++ QM Y + F E+A L ++
Sbjct: 66 ELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQH 125
Query: 572 AADVWYNISHVAIITECSPFSFSTHTSYLFIQGISDTRLAIQCLHLALSIDSSHGLSQNN 631
+ + V I + + + + + Q + +
Sbjct: 126 LEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCL-AMLIQCSLA 184
Query: 632 LAVLEAREGHIERASTYLQAAAASSPYLYETHYNQAVI 669
L+ + R L S ++ + + +
Sbjct: 185 RGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIY 222
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId:
9606]}
Length = 497
Score = 54.0 bits (129), Expect = 3e-08
Identities = 19/165 (11%), Positives = 46/165 (27%), Gaps = 8/165 (4%)
Query: 341 REAQQQFNSALNQFTDIEAFIRMIRVYIRLDQPI----RAIDIGRNALDCYPNEVTIMTE 396
+ + + + L+ + + + ++
Sbjct: 66 KNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQ 125
Query: 397 MARIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMGL 456
+ I + VK C + +G Y +Q A +YR Q+
Sbjct: 126 LGIISNKQTHTSAIVKPQSSSCSYI--CQHCLVHLGDIARYRNQTSQAESYYRHAAQLVP 183
Query: 457 YNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNI 501
N + +N LA+ + + + R+ +A+ N+
Sbjct: 184 SNGQPYNQLAILASSKGDHLTTIFYYCRS--IAVKFPFPAASTNL 226
Score = 54.0 bits (129), Expect = 3e-08
Identities = 28/247 (11%), Positives = 64/247 (25%), Gaps = 33/247 (13%)
Query: 342 EAQQQFNSALNQFTDI-EAFIRMIRVYIRLDQP----IRAIDIGRNALDCYPNEVTIMT- 395
++ Q A D+ ++ + V+ + + E +
Sbjct: 4 QSAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNH 63
Query: 396 ---EMARIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLL 452
+G + ++ A FY L +
Sbjct: 64 AFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASG------FYTQ----LLQELCTVF 113
Query: 453 QMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAILNALST 512
+ L + L + +V + S ++ +A
Sbjct: 114 NVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSY----ICQHCLVHLGDIA------- 162
Query: 513 SVYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENA 572
Y +Q A +YR Q+ N + +N LA+ + + + R+ +A+
Sbjct: 163 -RYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRS--IAVKFPF 219
Query: 573 ADVWYNI 579
N+
Sbjct: 220 PAASTNL 226
Score = 50.6 bits (120), Expect = 5e-07
Identities = 25/269 (9%), Positives = 76/269 (28%), Gaps = 14/269 (5%)
Query: 283 KYARDKTVAKYLFEYLYHHENDVASAMDLAVESTKACEFRDWWWKVQLGKCYFSLGLIRE 342
+YA DK V + L+ + + + + + ++ R + G +
Sbjct: 49 EYALDKKVEQDLWNHAFK---NQITTLQGQAKNRANPN-RSEVQANLSLFLEAASGFYTQ 104
Query: 343 AQQQFNSALN-QFTDIEAFIRMIRVYIRLDQPIRAIDIGRNALDCYPNEVTIMTEMARIF 401
Q+ + N ++ + + + ++ + + I
Sbjct: 105 LLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCS--YICQHCLVHLGDIA 162
Query: 402 EGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMGLYNAEL 461
N + YY+ + + + + + + +Y R + +
Sbjct: 163 RYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAA 222
Query: 462 FNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAILNALSTSVYNDQPEV 521
NL S+ + + + + H + + S + E
Sbjct: 223 STNLQK--ALSKALES-----RDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREK 275
Query: 522 ALLFYRRLLQMGLYNAELFNNLALCCFYS 550
++ LL +N++ ++ + +
Sbjct: 276 LEEQFKELLFQKAFNSQQLVHVTVINLFQ 304
Score = 45.9 bits (108), Expect = 1e-05
Identities = 25/265 (9%), Positives = 69/265 (26%), Gaps = 23/265 (8%)
Query: 410 SVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMGLYNAELFNNLALCC 469
S +Y + A ++ + Y+++L L A
Sbjct: 5 SAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDL---YQKMLVTDLEYALDKKVEQD-- 59
Query: 470 FYSQQYDMVVTCFERALSLALNENAADVWYNISHVAILNALSTSVYNDQPEVALLFYRRL 529
++ + +T + N N ++V +++++ ++ Y L +
Sbjct: 60 LWNHAFKNQITTLQGQAKNRANPNRSEV---QANLSLFLEAASGFYTQ----LLQELCTV 112
Query: 530 LQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNE---NAADVWYN-------I 579
+ L + L + +V + S + D+
Sbjct: 113 FNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAE 172
Query: 580 SHVAIITECSPFSFSTHTSYLFI-QGISDTRLAIQCLHLALSIDSSHGLSQNNLAVLEAR 638
S+ + P + + + D I ++++ + NL ++
Sbjct: 173 SYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232
Query: 639 EGHIERASTYLQAAAASSPYLYETH 663
+ + H
Sbjct: 233 ALESRDEVKTKWGVSDFIKAFIKFH 257
Score = 40.5 bits (94), Expect = 6e-04
Identities = 16/162 (9%), Positives = 42/162 (25%), Gaps = 19/162 (11%)
Query: 522 ALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALN-----ENAADVW 576
+ + R+ + + A Q +++ L L + D+W
Sbjct: 5 SAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQ---DLYQKMLVTDLEYALDKKVEQDLW 61
Query: 577 YNISHVAIIT---------ECSPFSFSTHTSYLFIQGISDTRLAIQCLHLALSIDSSHGL 627
+ I T + + S +Q L ++D +
Sbjct: 62 NHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRV 121
Query: 628 SQNNLAVLEAREGHIERASTYLQAAAASSPYLYETHYNQAVI 669
+ L ++ ++ H ++ + + I
Sbjct: 122 KSSQLGIISNKQTHTSAIVKPQSSSCSYIC--QHCLVHLGDI 161
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1
(PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Length = 323
Score = 52.5 bits (124), Expect = 8e-08
Identities = 35/280 (12%), Positives = 68/280 (24%), Gaps = 20/280 (7%)
Query: 412 KYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCFY 471
K Y+ + G+ A+L + +Q + E + L
Sbjct: 6 KGYQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAE 65
Query: 472 SQQYDMVVTCFERALSLALNENAADVWYNISHVAILNALSTSVYND-----QPEVALLFY 526
++Q + ++ R L L + A + +S P A L
Sbjct: 66 NEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVT 125
Query: 527 RRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNI------- 579
G + + V F A+ L DV +
Sbjct: 126 PAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLS 185
Query: 580 --------SHVAIITECSPFSFSTHTSYLFIQGISDTRLAIQCLHLALSIDSSHGLSQNN 631
A ++ + + + + A+ AL + + S+ N
Sbjct: 186 GEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYN 245
Query: 632 LAVLEAREGHIERASTYLQAAAASSPYLYETHYNQAVISN 671
L + G A + A +S
Sbjct: 246 LGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSE 285
Score = 46.0 bits (107), Expect = 9e-06
Identities = 34/273 (12%), Positives = 67/273 (24%), Gaps = 43/273 (15%)
Query: 352 NQFTDIEAFIRMIRVYIRLDQPIRAIDIGRNALDCYPNEVTIMTEMARIFEGLNNMPMSV 411
N D ++ A+ + A+ P + + +++
Sbjct: 14 NPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAI 73
Query: 412 KYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMGLYNAELFNNLAL---- 467
+ L+ A+ + V+ A R L+ A L
Sbjct: 74 SALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGG 133
Query: 468 -----------CCFYSQQYDMVVTCFERALSLALNENAADVWYNI--------------- 501
+ V F A+ L DV +
Sbjct: 134 AGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVD 193
Query: 502 -----------SHVAILNALSTSVYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCFYS 550
++ +T +Q E A+ YRR L++ NL + C
Sbjct: 194 CFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINL 253
Query: 551 QQYDMVVTCFERALSLALNENAADVWYNISHVA 583
+ V F AL+ + + ++
Sbjct: 254 GAHREAVEHFLEALN--MQRKSRGPRGEGGAMS 284
Score = 43.3 bits (100), Expect = 6e-05
Identities = 34/295 (11%), Positives = 71/295 (24%), Gaps = 36/295 (12%)
Query: 279 LNLAK-YARDKTVAKYLFEYLYHHENDVASAMDLAVESTKACEFRDWWWKVQLGKCYFSL 337
L A ++ + E + L + ++ + +
Sbjct: 57 QYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRY 116
Query: 338 GLIREAQQQFNSALNQFTDIEAFIRMIRVYIRLDQPIRAIDIGRNALDCYPNEVTIMTE- 396
+ R++ + + ++ A+ P + +
Sbjct: 117 TPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQC 176
Query: 397 -MARIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMG 455
+ +F +V + L +G +Q E A+ YRR L++
Sbjct: 177 GLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQ 236
Query: 456 LYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAILNALSTSVY 515
NL + C + V F AL+ + +
Sbjct: 237 PGYIRSRYNLGISCINLGAHREAVEHFLEALN--MQRKSRGPRGE--------------- 279
Query: 516 NDQPEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNE 570
G + +++ L L Q D R LS L
Sbjct: 280 ----------------GGAMSENIWSTLRLALSMLGQSDAYGAADARDLSTLLTM 318
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId:
562]}
Length = 259
Score = 49.4 bits (116), Expect = 4e-07
Identities = 29/228 (12%), Positives = 58/228 (25%), Gaps = 8/228 (3%)
Query: 339 LIREAQQQFNSALNQFTDIEAFIRMIRVYIRLDQPIRAIDIGRNALDCYPNEVTIMTEMA 398
L R Q + AL + +Y L A + AL P+ + +
Sbjct: 19 LARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLG 78
Query: 399 RIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMGLYN 458
N + + + +L+ D T A G+ +Y + ++A Q +
Sbjct: 79 IYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPND 138
Query: 459 AELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAILNALSTSVYNDQ 518
L L + + + ++ L
Sbjct: 139 PFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFY--------LGNISEQTL 190
Query: 519 PEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSL 566
E + + +E L D F+ A++
Sbjct: 191 MERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVAN 238
Score = 41.0 bits (94), Expect = 2e-04
Identities = 28/207 (13%), Positives = 48/207 (23%), Gaps = 6/207 (2%)
Query: 287 DKTVAKYLFE--YLYHHENDVASAMDLAVESTKACEFRDWWWKVQLGKCYFSLGLIREAQ 344
D A+ L+E LY A A + A LG G A
Sbjct: 33 DDERAQLLYERGVLYDSLGLRALARN-DFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAY 91
Query: 345 QQFNSALNQFTDIEAFIRMIR-VYIRLDQPIRAIDIGRNAL--DCYPNEVTIMTEMARIF 401
+ F+S L + A D D ++ +A
Sbjct: 92 EAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQK 151
Query: 402 EGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMGLYNAEL 461
+K + ++ + N E + + +E
Sbjct: 152 LDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSET 211
Query: 462 FNNLALCCFYSQQYDMVVTCFERALSL 488
L D F+ A++
Sbjct: 212 NFYLGKYYLSLGDLDSATALFKLAVAN 238
Score = 27.9 bits (60), Expect = 3.5
Identities = 11/68 (16%), Positives = 23/68 (33%), Gaps = 6/68 (8%)
Query: 518 QPEVALLFYRRLLQMGLY----NAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAA 573
Q EV L ++L A+L + + F +AL+ + +
Sbjct: 14 QQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALA--IRPDMP 71
Query: 574 DVWYNISH 581
+V+ +
Sbjct: 72 EVFNYLGI 79
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2,
p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Length = 192
Score = 46.4 bits (109), Expect = 2e-06
Identities = 17/146 (11%), Positives = 44/146 (30%), Gaps = 9/146 (6%)
Query: 432 GVNHFYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALN 491
GV + AL + + ++ + N+ + F R+++ +
Sbjct: 12 GVLAADKKDWKGALDAFSAVQD---PHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKH 68
Query: 492 ENAADVWYNISHVAI------LNALSTSVYNDQPEVALLFYRRLLQMGLYNAELFNNLAL 545
A + + + L ++ + + + LQ L+ E+ N+A
Sbjct: 69 LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAF 128
Query: 546 CCFYSQQYDMVVTCFERALSLALNEN 571
+++ A S+
Sbjct: 129 MYAKKEEWKKAEEQLALATSMKSEPR 154
Score = 37.5 bits (86), Expect = 0.002
Identities = 19/155 (12%), Positives = 47/155 (30%), Gaps = 26/155 (16%)
Query: 522 ALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISH 581
AL + + ++ + N+ + F R+++ + A + +
Sbjct: 24 ALDAFSAVQD---PHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLY 80
Query: 582 VAIITECSPFSFSTHTSYLFIQGISDTRLAIQCL---------HLALSIDSSHGLSQNNL 632
+ + + I D + A+ L L L N+
Sbjct: 81 --------------YQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNI 126
Query: 633 AVLEAREGHIERASTYLQAAAASSPYLYETHYNQA 667
A + A++ ++A L A + + ++A
Sbjct: 127 AFMYAKKEEWKKAEEQLALATSMKSEPRHSKIDKA 161
Score = 27.9 bits (61), Expect = 3.5
Identities = 10/74 (13%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Query: 318 ACEFRDWWWKVQLGKCYFSLGLIREAQQQFNSALNQFTDIE-AFIRMIRVYIRLDQPIRA 376
+ + Y ++A++Q A + ++ + I + +
Sbjct: 114 QFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECVWKQKLYEP 173
Query: 377 IDIGRNALDCYPNE 390
+ I L PNE
Sbjct: 174 VVIPVGRL-FRPNE 186
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing
protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 201
Score = 40.7 bits (94), Expect = 2e-04
Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 10/116 (8%)
Query: 458 NAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAILNALSTSVYND 517
+A+ F ++Y C+ RA + N A + N + +
Sbjct: 3 SAQELKEQGNRLFVGRKYPEAAACYGRA--ITRNPLVAVYYTNRALCYL--------KMQ 52
Query: 518 QPEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAA 573
QPE AL RR L++ + + L C + YD + +RA SLA +
Sbjct: 53 QPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLN 108
Score = 33.4 bits (75), Expect = 0.056
Identities = 15/140 (10%), Positives = 37/140 (26%), Gaps = 1/140 (0%)
Query: 329 QLGKCYFSLGLIREAQQQFNSALNQF-TDIEAFIRMIRVYIRLDQPIRAIDIGRNALDCY 387
+ G F EA + A+ + + Y+++ QP +A+ R AL+
Sbjct: 9 EQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELD 68
Query: 388 PNEVTIMTEMARIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLF 447
V + + + + ++ + + + +
Sbjct: 69 GQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSI 128
Query: 448 YRRLLQMGLYNAELFNNLAL 467
R + L
Sbjct: 129 EERRIHQESELHSYLTRLIA 148
Score = 31.5 bits (70), Expect = 0.24
Identities = 19/85 (22%), Positives = 31/85 (36%)
Query: 411 VKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCF 470
Y + R+ + + QPE AL RR L++ + + L C
Sbjct: 24 AACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQL 83
Query: 471 YSQQYDMVVTCFERALSLALNENAA 495
+ YD + +RA SLA +
Sbjct: 84 EMESYDEAIANLQRAYSLAKEQRLN 108
Score = 31.5 bits (70), Expect = 0.25
Identities = 20/115 (17%), Positives = 34/115 (29%), Gaps = 10/115 (8%)
Query: 432 GVNHFYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALN 491
G F + A Y R + A + N ALC QQ + + RAL L
Sbjct: 11 GNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ 70
Query: 492 ENAADVWYNISHVAILNALSTSVYNDQPEVALLFYRRLLQMGLYNAELFNNLALC 546
A + + + + + A+ +R + F +
Sbjct: 71 SVKAHFFLGQCQLEM----------ESYDEAIANLQRAYSLAKEQRLNFGDDIPS 115
Score = 30.3 bits (67), Expect = 0.56
Identities = 24/142 (16%), Positives = 39/142 (27%), Gaps = 21/142 (14%)
Query: 520 EVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNI 579
A Y R + A + N ALC QQ + + RAL L A +
Sbjct: 21 PEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQ 80
Query: 580 SHVAIITECSPFSFSTHTSYLFIQGISDTRLAIQCLHLALSIDSSHGLSQNNLAVLEARE 639
+ + AI L A S+ L+ + R
Sbjct: 81 CQLE---------------------MESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRI 119
Query: 640 GHIERASTYLQAAAASSPYLYE 661
+R ++ + L+
Sbjct: 120 AKKKRWNSIEERRIHQESELHS 141
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 128
Score = 37.5 bits (86), Expect = 0.001
Identities = 12/115 (10%), Positives = 35/115 (30%), Gaps = 3/115 (2%)
Query: 459 AELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAILNALSTSVYNDQ 518
A L + + +D + +++A L+ N + V
Sbjct: 4 ALKEKELGNDAYKKKDFDTALKHYDKAK--ELDPTNMTYITNQAAVYFEKGDYNKCRELC 61
Query: 519 PEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAA 573
+ + R + A+ + + F ++Y + + ++L+ +
Sbjct: 62 EKA-IEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVL 115
Score = 29.8 bits (66), Expect = 0.48
Identities = 14/107 (13%), Positives = 35/107 (32%), Gaps = 7/107 (6%)
Query: 396 EMARIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMG 455
E+ + ++K+Y + D T M I +F + +++G
Sbjct: 9 ELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVG 68
Query: 456 LYNAELF-------NNLALCCFYSQQYDMVVTCFERALSLALNENAA 495
N E + + F ++Y + + ++L+ +
Sbjct: 69 RENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVL 115
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio
parahaemolyticus [TaxId: 670]}
Length = 264
Score = 38.9 bits (90), Expect = 0.001
Identities = 15/151 (9%), Positives = 38/151 (25%), Gaps = 11/151 (7%)
Query: 434 NHFYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNEN 493
N Q + AL ++ +A L ++ ++ +++ L
Sbjct: 5 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKL----- 59
Query: 494 AADVWYNISHVAILNALSTSVYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQY 553
Y + + + + + A + SQ Y
Sbjct: 60 --FPEYLPGASQLRHLVKA--AQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDY 115
Query: 554 DMVVTCFERALSLALNENAADVWYNISHVAI 584
+ V + L + + + S +
Sbjct: 116 EQVSELALQI--EELRQEKGFLANDTSFSDV 144
Score = 34.6 bits (79), Expect = 0.029
Identities = 10/63 (15%), Positives = 20/63 (31%)
Query: 607 DTRLAIQCLHLALSIDSSHGLSQNNLAVLEAREGHIERASTYLQAAAASSPYLYETHYNQ 666
+ A++ L A+ +++ L +G ERA L + P
Sbjct: 11 QLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQL 70
Query: 667 AVI 669
+
Sbjct: 71 RHL 73
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 290
Score = 37.3 bits (85), Expect = 0.004
Identities = 19/207 (9%), Positives = 40/207 (19%), Gaps = 46/207 (22%)
Query: 459 AELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAILNALSTSVYNDQ 518
A+L A ++ ++ F +A ++
Sbjct: 37 ADLCVQAATIYRLRKELNLAGDSFLKAADYQKK-----------------------AGNE 73
Query: 519 PEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYN 578
E + C V E A+ + + N
Sbjct: 74 DEA---------------GNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGAN 118
Query: 579 ISHVAIITECSPFSFSTHTSYLFIQGISDTRLAIQCLHLALSIDSSHGLSQNNLAVLEAR 638
+ + + + A L+A
Sbjct: 119 FKFELGEILENDLHDYAKAIDCYEL--------AGEWYAQDQSVALSNKCFIKCADLKAL 170
Query: 639 EGHIERASTYLQAAAASSPYLYETHYN 665
+G AS SS + ++
Sbjct: 171 DGQYIEASDIYSKLIKSSMGNRLSQWS 197
Score = 35.7 bits (81), Expect = 0.014
Identities = 27/252 (10%), Positives = 54/252 (21%), Gaps = 38/252 (15%)
Query: 329 QLGKCYFSLGLIREAQQQFNSALNQFTDI-------EAFIRMIRVYIRLDQPIRAIDIGR 381
Q Y + A F A + ++ + + + A+D
Sbjct: 42 QAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLE 101
Query: 382 NALDCYPNEVTIMTEMARIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQP 441
NA+ + + FE + + Y + E A N
Sbjct: 102 NAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKC- 160
Query: 442 EVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNI 501
F A QY + + + ++ +
Sbjct: 161 --------------------FIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSL-- 198
Query: 502 SHVAILNALSTSVYNDQPEVALLFYRRLLQMGLYNAE-----LFNNLALCCFY--SQQYD 554
L + A + A+ +L S+Q
Sbjct: 199 -KDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNFLKSLIDAVNEGDSEQLS 257
Query: 555 MVVTCFERALSL 566
F+ + L
Sbjct: 258 EHCKEFDNFMRL 269
Score = 28.8 bits (63), Expect = 1.9
Identities = 12/144 (8%), Positives = 28/144 (19%), Gaps = 9/144 (6%)
Query: 444 ALLFYRRLLQMGLYN------AELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADV 497
A + + + C V E A+ + +
Sbjct: 56 AGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRR 115
Query: 498 W---YNISHVAILNALSTSVYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYD 554
+ N L + Q + + F A QY
Sbjct: 116 GANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYI 175
Query: 555 MVVTCFERALSLALNENAADVWYN 578
+ + + ++ +
Sbjct: 176 EASDIYSKLIKSSMGNRLSQWSLK 199
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 122
Score = 35.5 bits (81), Expect = 0.004
Identities = 13/82 (15%), Positives = 25/82 (30%), Gaps = 5/82 (6%)
Query: 412 KYYKLILKRD---ATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMGLYN--AELFNNLA 466
K ++ + A V YND ++ LL G + LA
Sbjct: 20 KKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLA 79
Query: 467 LCCFYSQQYDMVVTCFERALSL 488
+ + ++Y+ + L
Sbjct: 80 VGNYRLKEYEKALKYVRGLLQT 101
Score = 32.0 bits (72), Expect = 0.071
Identities = 12/107 (11%), Positives = 28/107 (26%), Gaps = 9/107 (8%)
Query: 462 FNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAILNALSTSVYNDQPEV 521
+ + F+ A + + + + YND
Sbjct: 2 MEAVLNELVSVEDLLKFEKKFQSEK--AAGSVSKSTQFEYAWCLVRTR-----YNDDIRK 54
Query: 522 ALLFYRRLLQMGLYN--AELFNNLALCCFYSQQYDMVVTCFERALSL 566
++ LL G + LA+ + ++Y+ + L
Sbjct: 55 GIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT 101
Score = 27.4 bits (60), Expect = 3.1
Identities = 13/106 (12%), Positives = 33/106 (31%), Gaps = 5/106 (4%)
Query: 367 YIRLDQPIRAIDIGRNALDCYPNEVTIMTEMARIFEGLNNMPM---SVKYYKLILKRDAT 423
+ ++ ++ ++ + E A + + +L + +
Sbjct: 9 LVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSK 68
Query: 424 CMEAIAC--IGVNHFYNDQPEVALLFYRRLLQMGLYNAELFNNLAL 467
+ + V ++ + E AL + R LLQ N + L
Sbjct: 69 EEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERL 114
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus)
[TaxId: 9913]}
Length = 169
Score = 35.8 bits (81), Expect = 0.007
Identities = 25/155 (16%), Positives = 54/155 (34%), Gaps = 15/155 (9%)
Query: 437 YNDQPE---VALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNEN 493
+ D PE V L ++L + +E N+ F SQ ++M + + + L
Sbjct: 6 HPDFPEDADVDLKDVDKILLI----SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSR 61
Query: 494 AADVWYNIS------HVAILNALSTSVYNDQPEVALLFYRRLLQMGLYNAELFNNLALCC 547
AA + + +LN + + + A+ L++ N + A
Sbjct: 62 AAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGW 121
Query: 548 FYSQQYDMVVTCFERALSLALNENAADVWYNISHV 582
++YD + ++A + + + V
Sbjct: 122 QGLKEYDQALADLKKAQE--IAPEDKAIQAELLKV 154
Score = 31.6 bits (70), Expect = 0.15
Identities = 25/164 (15%), Positives = 47/164 (28%), Gaps = 36/164 (21%)
Query: 514 VYNDQPE---VALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALS----- 565
+ D PE V L ++L + +E N+ F SQ ++M + + + L
Sbjct: 5 SHPDFPEDADVDLKDVDKILLI----SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGS 60
Query: 566 ---------LALNENAADVWYNISHV---------------AIITECSPFSFSTHTSYLF 601
L A NI + + + +
Sbjct: 61 RAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQG 120
Query: 602 IQGISDTRLAIQCLHLALSIDSSHGLSQNNLAVLEAREGHIERA 645
QG+ + A+ L A I Q L ++ + +
Sbjct: 121 WQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDK 164
Score = 31.2 bits (69), Expect = 0.26
Identities = 15/157 (9%), Positives = 49/157 (31%), Gaps = 10/157 (6%)
Query: 320 EFRDWWWKVQLGKCYFSLGLIREAQQQFNSALNQFTDIEAFIRMIRVYIRLDQPIRAIDI 379
+ +D + + + ++G Q + A+ ++T + ++ R + +
Sbjct: 16 DLKDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAK---L 72
Query: 380 GRNALDCYPNEVTIMTEMARIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYND 439
AL C N +M+ +++ +++ K +
Sbjct: 73 QPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQG-------WQGLK 125
Query: 440 QPEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYD 476
+ + AL ++ ++ + + L +
Sbjct: 126 EYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQK 162
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey
(Saimiri boliviensis) [TaxId: 27679]}
Length = 168
Score = 35.3 bits (80), Expect = 0.010
Identities = 17/130 (13%), Positives = 36/130 (27%), Gaps = 7/130 (5%)
Query: 458 NAELFNNLALCCFYSQQYDMVVTCFERA-----LSLALNENAADVWYNISHVAILNALST 512
A + F +Y V + + + L+E + + A LN
Sbjct: 14 QAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMC 73
Query: 513 SVYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENA 572
+ + A+ + L + N + +++ FE+ L +N
Sbjct: 74 YLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLE--VNPQN 131
Query: 573 ADVWYNISHV 582
I
Sbjct: 132 KAARLQIFMC 141
Score = 30.3 bits (67), Expect = 0.47
Identities = 19/148 (12%), Positives = 45/148 (30%), Gaps = 18/148 (12%)
Query: 329 QLGKCYFSLGLIREAQQQFNSALNQFTDIEAFIRMIRVYIRLDQPIRAIDIGRNALDCYP 388
+ G YF G +A Q+ + L +
Sbjct: 20 EKGTVYFKGGKYVQAVIQYGKI-----------VSWLEMEYGLSEKESKASESFLLAAFL 68
Query: 389 NEVTIMTEMARIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFY 448
N +A + L +V+ L D+ + + G ++ E A +
Sbjct: 69 N-------LAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDF 121
Query: 449 RRLLQMGLYNAELFNNLALCCFYSQQYD 476
++L++ N + +C +++++
Sbjct: 122 EKVLEVNPQNKAARLQIFMCQKKAKEHN 149
Score = 28.8 bits (63), Expect = 1.4
Identities = 19/129 (14%), Positives = 47/129 (36%), Gaps = 12/129 (9%)
Query: 426 EAIACIGVNHFYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERA 485
+A+ G + + + + + F NLA+C ++Y V C ++A
Sbjct: 33 QAVIQYGKIVSWLEMEYGLSEKESKASES--FLLAAFLNLAMCYLKLREYTKAVECCDKA 90
Query: 486 LSLALNENAADVWYNISHVAILNALSTSVYNDQPEVALLFYRRLLQMGLYNAELFNNLAL 545
L L + Y + ++ E A + ++L++ N + +
Sbjct: 91 LGL--DSANEKGLYRRGEAQL--------LMNEFESAKGDFEKVLEVNPQNKAARLQIFM 140
Query: 546 CCFYSQQYD 554
C +++++
Sbjct: 141 CQKKAKEHN 149
Score = 28.0 bits (61), Expect = 2.6
Identities = 10/138 (7%), Positives = 33/138 (23%), Gaps = 28/138 (20%)
Query: 536 NAELFNNLALCCFYSQQYDMVVTCFERALSL-------------ALNENAADVWYNISHV 582
A + F +Y V + + +S A + N++
Sbjct: 14 QAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMC 73
Query: 583 AIITECSPFSFSTHTSYLFI---------------QGISDTRLAIQCLHLALSIDSSHGL 627
+ + L + +++ A L ++ +
Sbjct: 74 YLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKA 133
Query: 628 SQNNLAVLEAREGHIERA 645
++ + + + +
Sbjct: 134 ARLQIFMCQKKAKEHNER 151
Score = 26.5 bits (57), Expect = 8.2
Identities = 14/124 (11%), Positives = 34/124 (27%), Gaps = 14/124 (11%)
Query: 381 RNALDCYPNEVTIMTEMARIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQ 440
A+ Y V+ + + E K ++ + A + + + +
Sbjct: 32 VQAVIQYGKIVSWLEMEYGLSE------------KESKASESFLLAAFLNLAMCYLKLRE 79
Query: 441 PEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYN 500
A+ + L + N + +++ FE+ L +N
Sbjct: 80 YTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLE--VNPQNKAARLQ 137
Query: 501 ISHV 504
I
Sbjct: 138 IFMC 141
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 32.7 bits (73), Expect = 0.038
Identities = 10/101 (9%), Positives = 30/101 (29%)
Query: 366 VYIRLDQPIRAIDIGRNALDCYPNEVTIMTEMARIFEGLNNMPMSVKYYKLILKRDATCM 425
+ + A+ A+ P+ + + + + + + + +
Sbjct: 12 KALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWG 71
Query: 426 EAIACIGVNHFYNDQPEVALLFYRRLLQMGLYNAELFNNLA 466
+ + + ++ E A Y L+ N +L L
Sbjct: 72 KGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQ 112
Score = 32.7 bits (73), Expect = 0.043
Identities = 12/116 (10%), Positives = 30/116 (25%), Gaps = 13/116 (11%)
Query: 536 NAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAIITECSPFSFST 595
D + C+ A+ L + + + ++ +
Sbjct: 2 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGC 61
Query: 596 HTSYLFIQG-------------ISDTRLAIQCLHLALSIDSSHGLSQNNLAVLEAR 638
T L ++ A + L ++++ + L +EAR
Sbjct: 62 KTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEAR 117
Score = 30.4 bits (67), Expect = 0.23
Identities = 20/105 (19%), Positives = 39/105 (37%), Gaps = 1/105 (0%)
Query: 329 QLGKCYFSLGLIREAQQQFNSALNQFTD-IEAFIRMIRVYIRLDQPIRAIDIGRNALDCY 387
+ G S+G I +A Q ++ A+ + Y + +A + G +D
Sbjct: 8 EKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLK 67
Query: 388 PNEVTIMTEMARIFEGLNNMPMSVKYYKLILKRDATCMEAIACIG 432
P+ + A E LN + + Y+ LK +A + +
Sbjct: 68 PDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQ 112
Score = 29.2 bits (64), Expect = 0.61
Identities = 9/101 (8%), Positives = 33/101 (32%), Gaps = 2/101 (1%)
Query: 404 LNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMGLYNAELFN 463
+ N+ +++ Y +K D + + + A + + + + ++
Sbjct: 16 VGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYS 75
Query: 464 NLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHV 504
A + +++ +E L N + + ++
Sbjct: 76 RKAAALEFLNRFEEAKRTYEEGL--KHEANNPQLKEGLQNM 114
Score = 25.8 bits (55), Expect = 8.4
Identities = 8/102 (7%), Positives = 25/102 (24%)
Query: 299 YHHENDVASAMDLAVESTKACEFRDWWWKVQLGKCYFSLGLIREAQQQFNSALNQFTDIE 358
++ A+ E+ K + + + + + + +
Sbjct: 13 ALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGK 72
Query: 359 AFIRMIRVYIRLDQPIRAIDIGRNALDCYPNEVTIMTEMARI 400
+ R L++ A L N + + +
Sbjct: 73 GYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNM 114
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 584
Score = 34.4 bits (78), Expect = 0.046
Identities = 46/398 (11%), Positives = 117/398 (29%), Gaps = 40/398 (10%)
Query: 280 NLAKYARDKTVAKYLFEYLYHHENDVASAMDLAVESTKACEFRDWWWKVQLGKCYFSLGL 339
L Y++ K V K LF +L H D+ AV + + + K Q+G Y + +
Sbjct: 41 ALDGYSKKKYVCKLLFIFLLGH--DIDFGHMEAVNLLSSNRYTE---K-QIG--YLFISV 92
Query: 340 IREAQQQF-----NSALNQFTDIEAFIRM--IRV--YIRLDQ--PIRAIDIGRNALDCYP 388
+ + + N+ N + + + A +I + +
Sbjct: 93 LVNSNSELIRLINNAIKNDLASRNPTFMGLALHCIANVGSREMAEAFAGEIPKILVAGDT 152
Query: 389 NEV---TIMTEMARIF----EGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQP 441
+ + + R++ + + + + L+ + + A A + P
Sbjct: 153 MDSVKQSAALCLLRLYRTSPDLVPMGDWTSRVVHLLNDQHLGVVTA-ATSLITTLAQKNP 211
Query: 442 EVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNI 501
E + L + Q Y L
Sbjct: 212 EEFKTSVSLAVSR------LSRIVTSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPPPED 265
Query: 502 SHVAILNALSTSVYNDQPEVALLFYRRLLQMGLYN-AELFNNLALCCFYSQQYDMVVTCF 560
V L+ + + + +Q A LF ++L + + +++V
Sbjct: 266 PAVR--GRLTECLETILNKAQEPPKSKKVQHSNAKNAVLFEAISLIIHHDSEPNLLVRAC 323
Query: 561 ERALSLALNENAADVWYNISHVAII--TECSPFSFSTHTSYLFIQGISDTRLAIQCLHLA 618
+ + + + + + +E S + TH + ++ ++++ A
Sbjct: 324 NQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIETVINALKTERDVSVRQ--RA 381
Query: 619 LSIDSSHGLSQNNLAVLEAREGHIERASTYLQAAAASS 656
+ + + N ++ ++E A ++
Sbjct: 382 VDLLYAMCDRSNAQQIVAEMLSYLETADYSIREEIVLK 419
>d1sbxa_ a.6.1.4 (A:) Ski oncogene {Human (Homo sapiens) [TaxId:
9606]}
Length = 106
Score = 30.1 bits (68), Expect = 0.24
Identities = 17/92 (18%), Positives = 29/92 (31%), Gaps = 26/92 (28%)
Query: 331 GKCYFSLGLIREAQQQFNSALNQFTDIEAFIRMIRVYIRLDQPIRAIDIGRNALDCYPNE 390
G+ L Q NS L F+ + ++I + C ++
Sbjct: 31 GEKRLCL------PQILNSVLRDFSLQQINAVCDELHIYCSR-------------CTADQ 71
Query: 391 VTIMTEMARIFEGLNNMPMSVKYYKLILKRDA 422
+ I + + +P S LI K DA
Sbjct: 72 L-------EILKVMGILPFSAPSCGLITKTDA 96
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl
isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Length = 153
Score = 30.7 bits (68), Expect = 0.29
Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 17/140 (12%)
Query: 329 QLGKCYFSLGLIREAQQQFNSALNQFTDIEAFIRMIRVYIRLDQPIRAIDIGRNALDCYP 388
+ G +F I EA ++ + + D I + C
Sbjct: 22 EEGNEFFKKNEINEAIVKY----------KEALDFFIHTEEWDDQILLDKKKNIEISCNL 71
Query: 389 NEVTIMTEMARIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFY 448
N +A + + P ++ + +LK D ++A+ +GV + Y E A
Sbjct: 72 N-------LATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENL 124
Query: 449 RRLLQMGLYNAELFNNLALC 468
+ + N ++ N+ LC
Sbjct: 125 YKAASLNPNNLDIRNSYELC 144
Score = 26.9 bits (58), Expect = 5.0
Identities = 8/75 (10%), Positives = 25/75 (33%)
Query: 564 LSLALNENAADVWYNISHVAIITECSPFSFSTHTSYLFIQGISDTRLAIQCLHLALSIDS 623
L+ N+N ++ + + + A + L+ A S++
Sbjct: 73 LATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNP 132
Query: 624 SHGLSQNNLAVLEAR 638
++ +N+ + +
Sbjct: 133 NNLDIRNSYELCVNK 147
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 30.8 bits (68), Expect = 0.36
Identities = 22/148 (14%), Positives = 49/148 (33%), Gaps = 18/148 (12%)
Query: 329 QLGKCYFSLGLIREAQQQFNSALNQFTDIEAFIRMIRVYIRLDQPIRAIDIGRNALDCYP 388
+ G YF G ++A Q+ ++ +F A
Sbjct: 18 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFS------------------NEEAQKAQA 59
Query: 389 NEVTIMTEMARIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFY 448
+ +A L +++ L+ D+ + ++ G H + E+A +
Sbjct: 60 LRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADF 119
Query: 449 RRLLQMGLYNAELFNNLALCCFYSQQYD 476
+++LQ+ N LA+C ++
Sbjct: 120 QKVLQLYPNNKAAKTQLAVCQQRIRRQL 147
Score = 27.7 bits (60), Expect = 3.3
Identities = 17/119 (14%), Positives = 39/119 (32%), Gaps = 6/119 (5%)
Query: 520 EVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNI 579
+ ALL Y++++ Y + N A Q + + A+ + + +
Sbjct: 30 KQALLQYKKIVSWLEYESSFSNEEAQKA----QALRLASHLNLAMCHLKLQAFSAAIESC 85
Query: 580 SHVAIITECSPFSFSTHTSYLFIQGISDTRLAIQCLHLALSIDSSHGLSQNNLAVLEAR 638
+ + + S + LA L + ++ ++ LAV + R
Sbjct: 86 NKALELDSNNEKGLSRRGEAHLAVNDFE--LARADFQKVLQLYPNNKAAKTQLAVCQQR 142
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus
[TaxId: 5087]}
Length = 305
Score = 29.0 bits (64), Expect = 1.8
Identities = 21/175 (12%), Positives = 41/175 (23%), Gaps = 10/175 (5%)
Query: 243 TAKSARPLTSQAARTIRLGTASMLSQPDGPFIQVSRLNLAKYARDKTVAKYLFEYLYHHE 302
+ L S+ R+ P+ LA TV + Y
Sbjct: 33 DPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADL--IATVNAITQKGAYAVV 90
Query: 303 NDVASAMDLAVESTKACEFRDWWWKVQL---GKCYFSLGLIREAQQQFNSALNQFTDIEA 359
+ + +F +W V E + + A
Sbjct: 91 DPHNYGRYYNSIISSPSDFETFWKTVASQFASNPLVIFDTDNEYHDMDQTLVLNLNQ--A 148
Query: 360 FIRMIRVYIRLDQPIRAIDIGRNALDCYPNEVTIMTEMARIFEGLNNMPMSVKYY 414
I IR + I + N+ + M + + + + + Y
Sbjct: 149 AIDGIR---SAGATSQYIFVEGNSWTGAWTWTNVNDNMKSLTDPSDKIIYEMHQY 200
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium
tepidum [TaxId: 1097]}
Length = 156
Score = 27.8 bits (60), Expect = 2.6
Identities = 13/124 (10%), Positives = 31/124 (25%), Gaps = 15/124 (12%)
Query: 459 AELFNNL--ALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAIL-----NALS 511
+ L A + +YD RA+ ++ + + + A AL+
Sbjct: 7 VGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALA 66
Query: 512 --------TSVYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERA 563
+ G + AL + + F++
Sbjct: 67 GLRSFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKV 126
Query: 564 LSLA 567
+ +
Sbjct: 127 VEMI 130
>d1l8ra_ a.6.1.4 (A:) Retinal determination protein Dachshund {Human
(Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 26.3 bits (58), Expect = 4.3
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 381 RNALDCYPNEVTIMTEMARIFEGLNNMPMSVKYYKLILKRDA 422
L+ P + E RI GL + V KLI ++D
Sbjct: 52 LKRLEITPVVCNV--EQVRILRGLGAIQPGVNRCKLISRKDF 91
>d1euva_ d.3.1.7 (A:) Ulp1 protease C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 221
Score = 27.5 bits (60), Expect = 4.7
Identities = 12/83 (14%), Positives = 26/83 (31%), Gaps = 9/83 (10%)
Query: 396 EMARIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMG 455
++ + N + + I RD + + ND + F+ + ++
Sbjct: 14 QVQKALASRENTQLMNRDNIEITVRD------FKTLAPRRWLNDT---IIEFFMKYIEKS 64
Query: 456 LYNAELFNNLALCCFYSQQYDMV 478
N FN+ + Y V
Sbjct: 65 TPNTVAFNSFFYTNLSERGYQGV 87
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.131 0.384
Gapped
Lambda K H
0.267 0.0500 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,385,775
Number of extensions: 104137
Number of successful extensions: 385
Number of sequences better than 10.0: 1
Number of HSP's gapped: 321
Number of HSP's successfully gapped: 72
Length of query: 677
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 586
Effective length of database: 1,158,166
Effective search space: 678685276
Effective search space used: 678685276
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (25.9 bits)