RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16611
(341 letters)
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT
{Human (Homo sapiens) [TaxId: 9606]}
Length = 388
Score = 92.8 bits (229), Expect = 1e-21
Identities = 48/224 (21%), Positives = 98/224 (43%), Gaps = 6/224 (2%)
Query: 116 PFIQVSRLNLAKIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLF 175
P V+ NL +F + +++ +++ + D ++A +G + A+
Sbjct: 166 PNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAA 225
Query: 176 YRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAIG 235
Y R L + +A + NLA + D+ + + RA+ L + D + N+++
Sbjct: 226 YLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAI--ELQPHFPDAYCNLANALKE 283
Query: 236 ISDTRLAIQCLHLALSIDSSHGLSQNNLAVLEAREGHIERASTYLQAAAASSPYLYETHY 295
A C + AL + +H S NNLA ++ +G+IE A + A P H
Sbjct: 284 KGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHS 343
Query: 296 NQAVISNLAGDLQESYNIVKKSLDLHPGHSYSW----DILRKLE 335
N A + G LQE+ K+++ + P + ++ + L++++
Sbjct: 344 NLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQ 387
Score = 77.0 bits (188), Expect = 2e-16
Identities = 33/191 (17%), Positives = 70/191 (36%), Gaps = 2/191 (1%)
Query: 116 PFIQVSRLNLAKIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLF 175
P + +NL + + +V Y L + ++ ++A+
Sbjct: 200 PNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDT 259
Query: 176 YRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAIG 235
YRR +++ + + + NLA C+ AL L AD N++++
Sbjct: 260 YRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRL--CPTHADSLNNLANIKRE 317
Query: 236 ISDTRLAIQCLHLALSIDSSHGLSQNNLAVLEAREGHIERASTYLQAAAASSPYLYETHY 295
+ A++ AL + + +NLA + ++G ++ A + + A SP + +
Sbjct: 318 QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYS 377
Query: 296 NQAVISNLAGD 306
N D
Sbjct: 378 NMGNTLKEMQD 388
Score = 56.2 bits (134), Expect = 2e-09
Identities = 37/227 (16%), Positives = 85/227 (37%), Gaps = 6/227 (2%)
Query: 116 PFIQVSRLNLAKIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLF 175
P + + NL +++ + ++++Y+ L+ ++ + E A+
Sbjct: 64 PLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQA 123
Query: 176 YRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAIG 235
Y LQ + ++L + + C+ +A+ N A W N+ V
Sbjct: 124 YVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIET--QPNFAVAWSNLGCVFNA 181
Query: 236 ISDTRLAIQCLHLALSIDSSHGLSQNNLAVLEAREGHIERASTYLQAAAASSPYLYETHY 295
+ LAI A+++D + + NL + +RA A + SP H
Sbjct: 182 QGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHG 241
Query: 296 NQAVISNLAGDLQESYNIVKKSLDLHPGHSYSW----DILRKLEQYF 338
N A + G + + + +++++L P ++ + L++
Sbjct: 242 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVA 288
Score = 52.8 bits (125), Expect = 2e-08
Identities = 30/251 (11%), Positives = 73/251 (29%), Gaps = 36/251 (14%)
Query: 123 LNLAKIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQM 182
+ LA + + ++ + +++ + + HF + + + F ++
Sbjct: 3 MELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQ 62
Query: 183 GLYNAELFNNLALC--------------------------------CFYSQQYDMVVTCF 210
AE ++NL DM
Sbjct: 63 NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQ 122
Query: 211 ERALSLALNENAADVWYNISHVAIGISDTRLAIQCLHLALSIDSSHGLSQNNLAVLEARE 270
+L N + V ++ ++ + A C A+ + ++ +NL + +
Sbjct: 123 AYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQ 182
Query: 271 GHIERASTYLQAAAASSPYLYETHYNQAVISNLAGDLQESYNIVKKSLDLHPGHSYSW-- 328
G I A + + A P + + N + A + ++L L P H+
Sbjct: 183 GEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGN 242
Query: 329 --DILRKLEQY 337
+ +
Sbjct: 243 LACVYYEQGLI 253
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId:
562]}
Length = 259
Score = 55.2 bits (131), Expect = 2e-09
Identities = 24/217 (11%), Positives = 64/217 (29%), Gaps = 4/217 (1%)
Query: 124 NLAKIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMG 183
+++ L ++ + L E +G+ + A + +L++
Sbjct: 42 ERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELD 101
Query: 184 LYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAIGISDTRLAI 243
N + +Y + + N+ +W ++ + + +
Sbjct: 102 PTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVL 161
Query: 244 QCLHLALSIDSSHGLSQNNLAVLEAREGHIERASTYLQAAAASSPYLYETHYNQAVISNL 303
+ + + + +ER + + +L ET++
Sbjct: 162 KQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLS 221
Query: 304 AGDLQESYNIVKKSLDLHPG----HSYSWDILRKLEQ 336
GDL + + K ++ + H Y+ L L Q
Sbjct: 222 LGDLDSATALFKLAVANNVHNFVEHRYALLELSLLGQ 258
Score = 36.7 bits (83), Expect = 0.002
Identities = 22/177 (12%), Positives = 47/177 (26%), Gaps = 6/177 (3%)
Query: 168 QPEVALLFYRRLLQMGLY----NAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAA 223
Q EV L ++L A+L + + F +AL+ + +
Sbjct: 14 QQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALA--IRPDMP 71
Query: 224 DVWYNISHVAIGISDTRLAIQCLHLALSIDSSHGLSQNNLAVLEAREGHIERASTYLQAA 283
+V+ + + A + L +D ++ + N + G + A L A
Sbjct: 72 EVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAF 131
Query: 284 AASSPYLYETHYNQAVISNLAGDLQESYNIVKKSLDLHPGHSYSWDILRKLEQYFSY 340
P + + Q + + + L
Sbjct: 132 YQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQ 188
Score = 29.4 bits (64), Expect = 0.57
Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 2/138 (1%)
Query: 193 LALCCFYSQQYDMVVTCFERALSLA--LNENAADVWYNISHVAIGISDTRLAIQCLHLAL 250
LA+ + Q ++++ E+ L+ ++ A + Y + + LA AL
Sbjct: 5 LAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQAL 64
Query: 251 SIDSSHGLSQNNLAVLEAREGHIERASTYLQAAAASSPYLYETHYNQAVISNLAGDLQES 310
+I N L + + G+ + A + P H N+ + G + +
Sbjct: 65 AIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLA 124
Query: 311 YNIVKKSLDLHPGHSYSW 328
+ + P +
Sbjct: 125 QDDLLAFYQDDPNDPFRS 142
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing
protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 201
Score = 53.8 bits (128), Expect = 3e-09
Identities = 26/177 (14%), Positives = 55/177 (31%), Gaps = 7/177 (3%)
Query: 160 GVNHFYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALN 219
G F + A Y R + A + N ALC QQ + + R +L L+
Sbjct: 11 GNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRR--ALELD 68
Query: 220 ENAADVWYNISHVAIGISDTRLAIQCLHLALSIDSSHGLSQNNLAVLEAREGHIERASTY 279
+ + + + + AI L A S+ L+ + + A
Sbjct: 69 GQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDI-----PSALRIAKKK 123
Query: 280 LQAAAASSPYLYETHYNQAVISNLAGDLQESYNIVKKSLDLHPGHSYSWDILRKLEQ 336
+ E+ + + +A + + +++ + H + +E
Sbjct: 124 RWNSIEERRIHQESELHSYLTRLIAAERERELEECQRNHEGHEDDGHIRAQQACIEA 180
Score = 43.0 bits (100), Expect = 2e-05
Identities = 31/181 (17%), Positives = 54/181 (29%), Gaps = 7/181 (3%)
Query: 139 VKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCF 198
Y + R+ + + QPE AL RR L++ + + L C
Sbjct: 24 AACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQL 83
Query: 199 YSQQYDMVVTCFERALSLALNENAADVWYNISHVAIGISDTRLAIQCLHLALSIDSSHGL 258
+ YD + +RA SLA ++ S R+A + ++ H
Sbjct: 84 EMESYDEAIANLQRAYSLAKE-------QRLNFGDDIPSALRIAKKKRWNSIEERRIHQE 136
Query: 259 SQNNLAVLEAREGHIERASTYLQAAAASSPYLYETHYNQAVISNLAGDLQESYNIVKKSL 318
S+ + + ER Q QA I + + +
Sbjct: 137 SELHSYLTRLIAAERERELEECQRNHEGHEDDGHIRAQQACIEAKHDKYMADMDELFSQV 196
Query: 319 D 319
D
Sbjct: 197 D 197
Score = 41.9 bits (97), Expect = 4e-05
Identities = 18/113 (15%), Positives = 36/113 (31%), Gaps = 2/113 (1%)
Query: 186 NAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAIGISDTRLAIQC 245
+A+ F ++Y C+ RA + N A + N + + + A+
Sbjct: 3 SAQELKEQGNRLFVGRKYPEAAACYGRA--ITRNPLVAVYYTNRALCYLKMQQPEQALAD 60
Query: 246 LHLALSIDSSHGLSQNNLAVLEAREGHIERASTYLQAAAASSPYLYETHYNQA 298
AL +D + L + + A LQ A + + +
Sbjct: 61 CRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDI 113
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId:
9606]}
Length = 497
Score = 54.0 bits (129), Expect = 1e-08
Identities = 20/192 (10%), Positives = 58/192 (30%), Gaps = 8/192 (4%)
Query: 138 SVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMGLYNAELFNNLALCC 197
S +Y + A ++ + Y+++L L A
Sbjct: 5 SAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDL---YQKMLVTDLEYALDKKVEQD-- 59
Query: 198 FYSQQYDMVVTCFERALSLALNENAADVWYNI-SHVAIGISDTRLAIQCLHLALSIDSSH 256
++ + +T + N N ++V N+ + +Q L ++D
Sbjct: 60 LWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPC 119
Query: 257 GLSQNNLAVLEAREGHIERASTYLQAAAASSPYLYETHYNQAVISNLAGDLQESYNIVKK 316
+ + L ++ ++ H ++ + + I+ ++ + +
Sbjct: 120 RVKSSQLGIISNKQTHTSAIVKPQSSSCSYIC--QHCLVHLGDIARYRNQTSQAESYYRH 177
Query: 317 SLDLHPGHSYSW 328
+ L P + +
Sbjct: 178 AAQLVPSNGQPY 189
Score = 48.6 bits (115), Expect = 6e-07
Identities = 19/106 (17%), Positives = 35/106 (33%), Gaps = 4/106 (3%)
Query: 124 NLAKIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMG 183
L I + VK C + +G Y +Q A +YR Q+
Sbjct: 125 QLGIISNKQTHTSAIVKPQSSSCSYI--CQHCLVHLGDIARYRNQTSQAESYYRHAAQLV 182
Query: 184 LYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNI 229
N + +N LA+ + + + R+ +A+ N+
Sbjct: 183 PSNGQPYNQLAILASSKGDHLTTIFYYCRS--IAVKFPFPAASTNL 226
Score = 34.8 bits (79), Expect = 0.016
Identities = 10/79 (12%), Positives = 23/79 (29%)
Query: 116 PFIQVSRLNLAKIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLF 175
Q ++L I N + YY+ + + + + + + +
Sbjct: 149 YICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFY 208
Query: 176 YRRLLQMGLYNAELFNNLA 194
Y R + + NL
Sbjct: 209 YCRSIAVKFPFPAASTNLQ 227
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2,
p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Length = 192
Score = 46.8 bits (110), Expect = 8e-07
Identities = 21/179 (11%), Positives = 50/179 (27%), Gaps = 25/179 (13%)
Query: 160 GVNHFYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALN 219
GV + AL + + ++ + N+ + F R+++ +
Sbjct: 12 GVLAADKKDWKGALDAFSAVQD---PHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKH 68
Query: 220 ENAADVWYNISHVAIGISDTRLAIQCLHLALSIDSSHGLSQNNLAVLEAREGHIERASTY 279
A + + LAI+ L AL + + Y
Sbjct: 69 LAVAYFQRGMLY--YQTEKYDLAIKDLKEALIQLRGN------------------QLIDY 108
Query: 280 LQAAAASSPYLYETHYNQAVISNLAGDLQESYNIVKKSLDLHP--GHSYSWDILRKLEQ 336
+ E YN A + + +++ + + + HS + + +
Sbjct: 109 KILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECVWK 167
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio
parahaemolyticus [TaxId: 670]}
Length = 264
Score = 45.4 bits (107), Expect = 4e-06
Identities = 13/132 (9%), Positives = 40/132 (30%), Gaps = 3/132 (2%)
Query: 202 QYDMVVTCFERALSLALNENAADVWYNISHVAIGISDTRLAIQCLHLALSIDSSHGLSQN 261
Q + A+ + A + + + D A + L ++ + + +
Sbjct: 11 QLQQALELLIEAI--KASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGAS 68
Query: 262 NLA-VLEAREGHIERASTYLQAAAASSPYLYETHYNQAVISNLAGDLQESYNIVKKSLDL 320
L +++A + + A A +S ++ D ++ + + +L
Sbjct: 69 QLRHLVKAAQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEEL 128
Query: 321 HPGHSYSWDILR 332
+ +
Sbjct: 129 RQEKGFLANDTS 140
Score = 42.3 bits (99), Expect = 4e-05
Identities = 15/138 (10%), Positives = 33/138 (23%), Gaps = 3/138 (2%)
Query: 162 NHFYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNEN 221
N Q + AL ++ +A L ++ ++ + S+ L
Sbjct: 5 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQ--SIKLFPE 62
Query: 222 AADVWYNISHVAIGISDTRLAIQCLHLALSIDSSHGL-SQNNLAVLEAREGHIERASTYL 280
+ H+ + Q A + + L L E+ S
Sbjct: 63 YLPGASQLRHLVKAAQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELA 122
Query: 281 QAAAASSPYLYETHYNQA 298
+ +
Sbjct: 123 LQIEELRQEKGFLANDTS 140
Score = 36.2 bits (83), Expect = 0.003
Identities = 15/68 (22%), Positives = 29/68 (42%)
Query: 269 REGHIERASTYLQAAAASSPYLYETHYNQAVISNLAGDLQESYNIVKKSLDLHPGHSYSW 328
EG +++A L A +SP + + + GD + + + +S+ L P +
Sbjct: 8 SEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGA 67
Query: 329 DILRKLEQ 336
LR L +
Sbjct: 68 SQLRHLVK 75
Score = 35.8 bits (82), Expect = 0.005
Identities = 11/100 (11%), Positives = 24/100 (24%), Gaps = 2/100 (2%)
Query: 238 DTRLAIQCLHLALSIDSSHGLSQNNLAVLEAREGHIERASTYLQAAAASSPYLYETHYNQ 297
+ A++ L A+ +++ L +G ERA L + P
Sbjct: 11 QLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQL 70
Query: 298 AVISNLAGDLQESYNIVKKSLDLHPGHSYSWDILRKLEQY 337
+ + + G +
Sbjct: 71 RHL--VKAAQARKDFAQGAATAKVLGENEELTKSLVSFNL 108
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1
(PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Length = 323
Score = 43.3 bits (100), Expect = 2e-05
Identities = 21/160 (13%), Positives = 43/160 (26%), Gaps = 2/160 (1%)
Query: 140 KYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCFY 199
K Y+ + G+ A+L + +Q + E + L
Sbjct: 6 KGYQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAE 65
Query: 200 SQQYDMVVTCFERALSLALNENAADVWYNISHVAIGISDTRLAIQCLHLALSIDSSHGLS 259
++Q + ++ R L L + ++ S R A + L L ++
Sbjct: 66 NEQELLAISALRRCLE--LKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHL 123
Query: 260 QNNLAVLEAREGHIERASTYLQAAAASSPYLYETHYNQAV 299
G + S + + AV
Sbjct: 124 VTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAV 163
Score = 40.2 bits (92), Expect = 2e-04
Identities = 33/215 (15%), Positives = 59/215 (27%), Gaps = 15/215 (6%)
Query: 123 LNLAKIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQM 182
L +++ + L+ A+ + V+ A R L+
Sbjct: 57 QYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRY 116
Query: 183 GLYNAELFNNLAL---------------CCFYSQQYDMVVTCFERALSLALNENAADVWY 227
A L + V F A+ L DV
Sbjct: 117 TPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQC 176
Query: 228 NISHVAIGISDTRLAIQCLHLALSIDSSHGLSQNNLAVLEAREGHIERASTYLQAAAASS 287
+ + + A+ C ALS+ + L N L A E A + A
Sbjct: 177 GLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQ 236
Query: 288 PYLYETHYNQAVISNLAGDLQESYNIVKKSLDLHP 322
P + YN + G +E+ ++L++
Sbjct: 237 PGYIRSRYNLGISCINLGAHREAVEHFLEALNMQR 271
Score = 39.0 bits (89), Expect = 6e-04
Identities = 25/161 (15%), Positives = 46/161 (28%), Gaps = 10/161 (6%)
Query: 110 LSQPDGPFIQVSRLNLAKIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQP 169
+ + L +F +V + L +G +Q
Sbjct: 163 VRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQS 222
Query: 170 EVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSL---------ALNE 220
E A+ YRR L++ NL + C + V F AL++
Sbjct: 223 EEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGA 282
Query: 221 NAADVWYNISHVAIGISDTRLAIQCLHLALSIDSSH-GLSQ 260
+ ++W + + + LS + GL Q
Sbjct: 283 MSENIWSTLRLALSMLGQSDAYGAADARDLSTLLTMFGLPQ 323
Score = 36.3 bits (82), Expect = 0.004
Identities = 20/123 (16%), Positives = 43/123 (34%), Gaps = 2/123 (1%)
Query: 144 LILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQY 203
+ L + + +GV + + + A+ + L + + L+N L Q
Sbjct: 163 VRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQS 222
Query: 204 DMVVTCFERALSLALNENAADVWYNISHVAIGISDTRLAIQCLHLALSIDSSHGLSQNNL 263
+ V + R +L L YN+ I + R A++ AL++ +
Sbjct: 223 EEAVAAYRR--ALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEG 280
Query: 264 AVL 266
+
Sbjct: 281 GAM 283
Score = 36.3 bits (82), Expect = 0.004
Identities = 16/133 (12%), Positives = 36/133 (27%), Gaps = 2/133 (1%)
Query: 210 FERALSLALNENAADV--WYNISHVAIGISDTRLAIQCLHLALSIDSSHGLSQNNLAVLE 267
+++ D + + D A+ A+ D H + L +
Sbjct: 4 YDKGYQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQ 63
Query: 268 AREGHIERASTYLQAAAASSPYLYETHYNQAVISNLAGDLQESYNIVKKSLDLHPGHSYS 327
A A + L+ P AV +++ I++ L P +++
Sbjct: 64 AENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHL 123
Query: 328 WDILRKLEQYFSY 340
+
Sbjct: 124 VTPAEEGAGGAGL 136
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase
alpha-subunit, N-terminal domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 334
Score = 41.1 bits (95), Expect = 1e-04
Identities = 16/130 (12%), Positives = 33/130 (25%), Gaps = 6/130 (4%)
Query: 124 NLAKIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMG 183
+ + L+ P S +L +E + N F+ D + + FY R L
Sbjct: 183 YRSCLLPQLHPQPDSGPQGRLPENVLLKELELV----QNAFFTDPNDQSAWFYHRWLLGR 238
Query: 184 LYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAIGISDTRLAI 243
Q + N+ + + + +
Sbjct: 239 AEPLFRCELSVEKSTVLQSELESCKELQELEPE--NKWCLLTIILLMRALDPLLYEKETL 296
Query: 244 QCLHLALSID 253
Q ++D
Sbjct: 297 QYFSTLKAVD 306
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey
(Saimiri boliviensis) [TaxId: 27679]}
Length = 168
Score = 38.8 bits (89), Expect = 3e-04
Identities = 16/123 (13%), Positives = 42/123 (34%), Gaps = 4/123 (3%)
Query: 154 EAIACIGVNHFYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERA 213
+A+ G + + + + + F NLA+C ++Y V C ++A
Sbjct: 33 QAVIQYGKIVSWLEMEYGLSEKESKASES--FLLAAFLNLAMCYLKLREYTKAVECCDKA 90
Query: 214 LSLALNENAADVWYNISHVAIGISDTRLAIQCLHLALSIDSSHGLSQNNLAVLEAREGHI 273
L L + Y + +++ A L ++ + ++ + + + +
Sbjct: 91 LGL--DSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMCQKKAKEH 148
Query: 274 ERA 276
Sbjct: 149 NER 151
Score = 31.1 bits (69), Expect = 0.11
Identities = 15/89 (16%), Positives = 37/89 (41%)
Query: 116 PFIQVSRLNLAKIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLF 175
F+ + LNLA + L +V+ L D+ + + G ++ E A
Sbjct: 61 SFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGD 120
Query: 176 YRRLLQMGLYNAELFNNLALCCFYSQQYD 204
+ ++L++ N + +C +++++
Sbjct: 121 FEKVLEVNPQNKAARLQIFMCQKKAKEHN 149
Score = 27.6 bits (60), Expect = 1.7
Identities = 10/91 (10%), Positives = 26/91 (28%), Gaps = 2/91 (2%)
Query: 142 YKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCFYSQ 201
K ++ + A + + + + A+ + L + N +
Sbjct: 53 EKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMN 112
Query: 202 QYDMVVTCFERALSLALNENAADVWYNISHV 232
+++ FE+ L +N I
Sbjct: 113 EFESAKGDFEKVLE--VNPQNKAARLQIFMC 141
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 37.3 bits (85), Expect = 4e-04
Identities = 16/110 (14%), Positives = 41/110 (37%), Gaps = 2/110 (1%)
Query: 160 GVNHFYNDQPEVALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALN 219
G + AL Y +++ +N L++N Y+++ D + ++ L
Sbjct: 10 GNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNR--SAAYAKKGDYQKAYEDGCKTVDLK 67
Query: 220 ENAADVWYNISHVAIGISDTRLAIQCLHLALSIDSSHGLSQNNLAVLEAR 269
+ + + ++ A + L ++++ + L +EAR
Sbjct: 68 PDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEAR 117
Score = 31.9 bits (71), Expect = 0.033
Identities = 12/115 (10%), Positives = 37/115 (32%), Gaps = 3/115 (2%)
Query: 119 QVSRL-NLAKIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYR 177
QV+ L + N+ +++ Y +K D + + + A
Sbjct: 2 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGC 61
Query: 178 RLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHV 232
+ + + + ++ A + +++ +E L N + + ++
Sbjct: 62 KTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGL--KHEANNPQLKEGLQNM 114
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase
alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 315
Score = 39.2 bits (90), Expect = 5e-04
Identities = 24/220 (10%), Positives = 68/220 (30%), Gaps = 8/220 (3%)
Query: 124 NLAKIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFY-NDQPEVALLFYRRLLQM 182
+ + + K + ++ +A V + + +++
Sbjct: 48 YFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEE 107
Query: 183 GLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAIGISDTRLA 242
N +++++ + + + + L+ + W + V
Sbjct: 108 QPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQ--DAKNYHAWQHRQWVIQEFKLWDNE 165
Query: 243 IQCLHLALSIDSSHGLSQNNLAVLEAREGHIERASTYLQAAAASSPYLYETHYNQAVISN 302
+Q + L D + N + + + + + + +N++ +
Sbjct: 166 LQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNY 225
Query: 303 LAG-----DLQESYNIVKKSLDLHPGHSYSWDILRKLEQY 337
L G L + N++ + LDL P HS + I ++ Y
Sbjct: 226 LKGILQDRGLSKYPNLLNQLLDLQPSHSSPYLIAFLVDIY 265
Score = 31.8 bits (71), Expect = 0.10
Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Query: 261 NNLAVLEAREGHIERASTYLQAAAASSPYLYETHYNQAVI-SNLAGDLQESYNIVKKSLD 319
+ + R+ ERA + A + Y + + V+ +L DL E N + ++
Sbjct: 47 DYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIE 106
Query: 320 LHPGHSYSWDIL 331
P + W
Sbjct: 107 EQPKNYQVWHHR 118
Score = 31.5 bits (70), Expect = 0.12
Identities = 13/159 (8%), Positives = 41/159 (25%), Gaps = 7/159 (4%)
Query: 187 AELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAIGI-SDTRLAIQC 245
++++ ++ + A+ L N VW+ + + D +
Sbjct: 43 RDVYDYFRAVLQRDERSERAFKLTRDAIEL--NAANYTVWHFRRVLLKSLQKDLHEEMNY 100
Query: 246 LHLALSIDSSHGLSQNNLAVLEAREGHIERASTYLQAAAASSPYLYETHYNQAVISNLAG 305
+ + + ++ VL + ++ Y ++ +
Sbjct: 101 ITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFK 160
Query: 306 DLQESYNIVKKSLDLHPGHSYSW----DILRKLEQYFSY 340
V + L ++ W ++ Y
Sbjct: 161 LWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDR 199
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 122
Score = 36.2 bits (83), Expect = 0.001
Identities = 13/98 (13%), Positives = 29/98 (29%), Gaps = 5/98 (5%)
Query: 124 NLAKIFEGLNNMPMSVKYYKLILKRD---ATCMEAIACIGVNHFYNDQPEVALLFYRRLL 180
+ + ++ K ++ + A V YND ++ LL
Sbjct: 4 AVLNELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELL 63
Query: 181 QMGLYN--AELFNNLALCCFYSQQYDMVVTCFERALSL 216
G + LA+ + ++Y+ + L
Sbjct: 64 PKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT 101
Score = 34.3 bits (78), Expect = 0.005
Identities = 12/101 (11%), Positives = 33/101 (32%), Gaps = 5/101 (4%)
Query: 242 AIQCLHLALSIDSSHGLSQNNLAVLEA---REGHIERASTYLQAAAA--SSPYLYETHYN 296
+ + S +Q A I + L+ S + +
Sbjct: 18 FEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFY 77
Query: 297 QAVISNLAGDLQESYNIVKKSLDLHPGHSYSWDILRKLEQY 337
AV + + +++ V+ L P ++ + ++ R +++
Sbjct: 78 LAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKA 118
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 290
Score = 38.0 bits (87), Expect = 0.001
Identities = 18/201 (8%), Positives = 43/201 (21%), Gaps = 58/201 (28%)
Query: 187 AELFNNLALCCFYSQQYDMVVTCFERALSLALN----ENAADVWYNISHVAIGISDTRLA 242
A+L A ++ ++ F +A + A + + ++ A
Sbjct: 37 ADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNA 96
Query: 243 IQC-----------------------------------------------LHLALSIDSS 255
+ + +
Sbjct: 97 VDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVAL 156
Query: 256 HGLSQNNLAVLEAREGHIERASTYLQAAAASSPYLYETHYNQAVISNLA-------GDLQ 308
A L+A +G AS SS + ++ D
Sbjct: 157 SNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAV 216
Query: 309 ESYNIVKKSLDLHPGHSYSWD 329
+ +++ P + S +
Sbjct: 217 AAARTLQEGQSEDPNFADSRE 237
Score = 30.3 bits (67), Expect = 0.27
Identities = 18/150 (12%), Positives = 38/150 (25%), Gaps = 18/150 (12%)
Query: 124 NLAKIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMG 183
K F+ N +V + ++ + + E L Y + +
Sbjct: 82 EAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCY 141
Query: 184 LYNAEL-------------FNNLALCCFYSQQYDMVVTCFERALSLALNE-----NAADV 225
E F A QY + + + ++ + D
Sbjct: 142 ELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDY 201
Query: 226 WYNISHVAIGISDTRLAIQCLHLALSIDSS 255
+ + +D A + L S D +
Sbjct: 202 FLKKGLCQLAATDAVAAARTLQEGQSEDPN 231
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 128
Score = 34.5 bits (78), Expect = 0.005
Identities = 19/132 (14%), Positives = 42/132 (31%), Gaps = 10/132 (7%)
Query: 187 AELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAIGISDTRLAIQCL 246
A L + + +D + +++A L+ N + V D +
Sbjct: 4 ALKEKELGNDAYKKKDFDTALKHYDKA--KELDPTNMTYITNQAAVYFEKGDYNKCRELC 61
Query: 247 HLALSIDSSHGLSQNNLAVLEAREGHIERASTYLQAAAASSPYLYETHYNQAVISNLAGD 306
A+ + + +A AR G+ + A YN+++ + D
Sbjct: 62 EKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDA--------IHFYNKSLAEHRTPD 113
Query: 307 LQESYNIVKKSL 318
+ + +K L
Sbjct: 114 VLKKCQQAEKIL 125
Score = 31.8 bits (71), Expect = 0.040
Identities = 14/107 (13%), Positives = 34/107 (31%), Gaps = 7/107 (6%)
Query: 124 NLAKIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMG 183
L + ++K+Y + D T M I +F + +++G
Sbjct: 9 ELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVG 68
Query: 184 LYNAELF-------NNLALCCFYSQQYDMVVTCFERALSLALNENAA 223
N E + + F ++Y + + ++L+ +
Sbjct: 69 RENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVL 115
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl
isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Length = 153
Score = 34.2 bits (77), Expect = 0.009
Identities = 14/84 (16%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Query: 186 NAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAIGISDTRLAIQC 245
NLA C ++ Y + + L + N A ++++ G A +
Sbjct: 66 EISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFG--FLEEAKEN 123
Query: 246 LHLALSIDSSHGLSQNNLAVLEAR 269
L+ A S++ ++ +N+ + +
Sbjct: 124 LYKAASLNPNNLDIRNSYELCVNK 147
Score = 30.0 bits (66), Expect = 0.21
Identities = 18/74 (24%), Positives = 34/74 (45%)
Query: 123 LNLAKIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQM 182
LNLA + + P ++ + +LK D ++A+ +GV + Y E A + +
Sbjct: 71 LNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASL 130
Query: 183 GLYNAELFNNLALC 196
N ++ N+ LC
Sbjct: 131 NPNNLDIRNSYELC 144
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus)
[TaxId: 9913]}
Length = 169
Score = 34.3 bits (77), Expect = 0.011
Identities = 13/91 (14%), Positives = 26/91 (28%), Gaps = 2/91 (2%)
Query: 186 NAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAIGISDTRLAIQC 245
N+ C + V AL + + + Y + G+ + A+
Sbjct: 76 ALSCVLNIGACKLKMSDWQGAVDSCLEALEI--DPSNTKALYRRAQGWQGLKEYDQALAD 133
Query: 246 LHLALSIDSSHGLSQNNLAVLEAREGHIERA 276
L A I Q L ++ + +
Sbjct: 134 LKKAQEIAPEDKAIQAELLKVKQKIKAQKDK 164
Score = 27.4 bits (59), Expect = 2.0
Identities = 10/89 (11%), Positives = 28/89 (31%)
Query: 116 PFIQVSRLNLAKIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLF 175
P LN+ +++ +V L+ D + +A+ + + AL
Sbjct: 74 PVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALAD 133
Query: 176 YRRLLQMGLYNAELFNNLALCCFYSQQYD 204
++ ++ + + L +
Sbjct: 134 LKKAQEIAPEDKAIQAELLKVKQKIKAQK 162
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 31.9 bits (71), Expect = 0.058
Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 13/123 (10%)
Query: 160 GVNHFYNDQPEVALLFYRRLLQMGLYNAELFNNLA-------------LCCFYSQQYDMV 206
G +F + + ALL Y++++ Y + N A L + +
Sbjct: 20 GTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFS 79
Query: 207 VTCFERALSLALNENAADVWYNISHVAIGISDTRLAIQCLHLALSIDSSHGLSQNNLAVL 266
+L L+ N + ++D LA L + ++ ++ LAV
Sbjct: 80 AAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVC 139
Query: 267 EAR 269
+ R
Sbjct: 140 QQR 142
Score = 25.4 bits (54), Expect = 9.7
Identities = 18/89 (20%), Positives = 36/89 (40%)
Query: 116 PFIQVSRLNLAKIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLF 175
S LNLA L +++ L+ D+ + ++ G H + E+A
Sbjct: 59 ALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARAD 118
Query: 176 YRRLLQMGLYNAELFNNLALCCFYSQQYD 204
++++LQ+ N LA+C ++
Sbjct: 119 FQKVLQLYPNNKAAKTQLAVCQQRIRRQL 147
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III
{Escherichia coli [TaxId: 562]}
Length = 366
Score = 31.4 bits (69), Expect = 0.15
Identities = 17/170 (10%), Positives = 37/170 (21%), Gaps = 17/170 (10%)
Query: 146 LKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQM-----GLYNAELFNNLALCCFYS 200
++ D E A + P+ A + L+ + L
Sbjct: 5 IREDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCK 64
Query: 201 QQYDMVVTCFERALSLAL----NENAADVWYNISHVAIGISDTRLAIQCLHLALSI---- 252
+ + ++ +A A S + + A + A +
Sbjct: 65 GELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQ 124
Query: 253 ----DSSHGLSQNNLAVLEAREGHIERASTYLQAAAASSPYLYETHYNQA 298
H A L ++ A ++ Q
Sbjct: 125 HLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQC 174
Score = 30.3 bits (66), Expect = 0.34
Identities = 11/117 (9%), Positives = 28/117 (23%), Gaps = 10/117 (8%)
Query: 111 SQPDGPFIQVSRLNLAKIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVN----HFYN 166
+ +I + ++ + + + + K + + N
Sbjct: 205 GKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILL 264
Query: 167 DQPEVALLFYRRLLQMG------LYNAELFNNLALCCFYSQQYDMVVTCFERALSLA 217
+ E A + L + L + + + AL LA
Sbjct: 265 GEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLA 321
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 159
Score = 30.0 bits (66), Expect = 0.21
Identities = 20/147 (13%), Positives = 43/147 (29%), Gaps = 10/147 (6%)
Query: 184 LYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAIGISDTRLAI 243
L AE A F ++ Y+ + + +A+ L + +++++ +
Sbjct: 7 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYA--L 64
Query: 244 QCLHLALSIDSSHGLSQNNLAVLEAREGHIERASTYLQAAAASSPYLYETHYNQAVISNL 303
A+ +D + A G A + P+ + + +
Sbjct: 65 GDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKI 124
Query: 304 --------AGDLQESYNIVKKSLDLHP 322
A E V SLD+
Sbjct: 125 VKQKAFERAIAGDEHKRSVVDSLDIES 151
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit
tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 145
Score = 29.8 bits (65), Expect = 0.22
Identities = 15/153 (9%), Positives = 35/153 (22%), Gaps = 16/153 (10%)
Query: 123 LNLAKIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQM 182
++ F+ + + + K + + + G Q +
Sbjct: 1 MDTETEFDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQF-----HSISDAKQ 55
Query: 183 GLYNAELFNNLALCCFYSQQYDMVVTCFERALSLALNENAADVWYNISHVAIGISDTRLA 242
+ A AL + + + + LA
Sbjct: 56 MIQEAITKFEEALLIDPKKDEAVWCIGN----------AYTSFAFLTPDETEAKHNFDLA 105
Query: 243 IQCLHLALSIDSSHGLSQNNLAVLE-AREGHIE 274
Q A+ + +L + A + H E
Sbjct: 106 TQFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAE 138
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 124
Score = 29.0 bits (65), Expect = 0.41
Identities = 8/81 (9%), Positives = 24/81 (29%), Gaps = 4/81 (4%)
Query: 192 NLALCCFYSQQYDMV---VTCFERALSLALNENAADVWYNISHVAIGISDTRLAIQCLHL 248
N A S + V A + Y ++ + + +A + +
Sbjct: 40 NYAWGLIKSTDVNDERLGVKILTDIYKEA-ESRRRECLYYLTIGCYKLGEYSMAKRYVDT 98
Query: 249 ALSIDSSHGLSQNNLAVLEAR 269
+ ++ +++E +
Sbjct: 99 LFEHERNNKQVGALKSMVEDK 119
Score = 27.4 bits (61), Expect = 1.3
Identities = 6/66 (9%), Positives = 14/66 (21%), Gaps = 1/66 (1%)
Query: 272 HIERASTYLQAAAASSPYL-YETHYNQAVISNLAGDLQESYNIVKKSLDLHPGHSYSWDI 330
L + E Y + G+ + V + + +
Sbjct: 53 DERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGAL 112
Query: 331 LRKLEQ 336
+E
Sbjct: 113 KSMVED 118
Score = 25.1 bits (55), Expect = 7.8
Identities = 12/89 (13%), Positives = 21/89 (23%), Gaps = 15/89 (16%)
Query: 201 QQYDMVVTCFERALSLALNENAADVWYNISHVAIGISDTRLAIQCLHLALSIDSSHGL-S 259
+ + F A L + + D RL ++ L S
Sbjct: 30 GPTATIQSRFNYAWGLIKSTDVNDE--------------RLGVKILTDIYKEAESRRREC 75
Query: 260 QNNLAVLEAREGHIERASTYLQAAAASSP 288
L + + G A Y+
Sbjct: 76 LYYLTIGCYKLGEYSMAKRYVDTLFEHER 104
>d1euva_ d.3.1.7 (A:) Ulp1 protease C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 221
Score = 27.8 bits (61), Expect = 1.5
Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 9/80 (11%)
Query: 127 KIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPEVALLFYRRLLQMGLYN 186
K N + + I RD + + ND + F+ + ++ N
Sbjct: 17 KALASRENTQLMNRDNIEITVRD------FKTLAPRRWLNDT---IIEFFMKYIEKSTPN 67
Query: 187 AELFNNLALCCFYSQQYDMV 206
FN+ + Y V
Sbjct: 68 TVAFNSFFYTNLSERGYQGV 87
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1
(PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Length = 112
Score = 26.4 bits (56), Expect = 2.6
Identities = 11/104 (10%), Positives = 38/104 (36%), Gaps = 1/104 (0%)
Query: 112 QPDGPFIQV-SRLNLAKIFEGLNNMPMSVKYYKLILKRDATCMEAIACIGVNHFYNDQPE 170
+ + P++ + + L N+ + ++ + +++ EA +G+ N++
Sbjct: 8 EANNPYMYHENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDG 67
Query: 171 VALLFYRRLLQMGLYNAELFNNLALCCFYSQQYDMVVTCFERAL 214
+A++ + + + LA+ + + L
Sbjct: 68 LAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLRAWL 111
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 25.9 bits (56), Expect = 2.8
Identities = 10/88 (11%), Positives = 25/88 (28%), Gaps = 7/88 (7%)
Query: 223 ADVWYNISHVAIGISDTRLAI-------QCLHLALSIDSSHGLSQNNLAVLEAREGHIER 275
A+ + + VA +D + L + L+ ++G +++
Sbjct: 5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDK 64
Query: 276 ASTYLQAAAASSPYLYETHYNQAVISNL 303
A + P + N +
Sbjct: 65 ALLLTKKLLELDPEHQRANGNLKYFEYI 92
>d1b89a_ a.118.1.3 (A:) Clathrin heavy chain proximal leg segment
{Cow (Bos taurus) [TaxId: 9913]}
Length = 336
Score = 26.4 bits (58), Expect = 5.8
Identities = 26/147 (17%), Positives = 48/147 (32%), Gaps = 27/147 (18%)
Query: 162 NHFYNDQPEVALLFYRRLLQMGLYNA--ELFNNLALCCFYSQQYDMVVTC------FERA 213
N+ +V R +Y+A L+NN+ + + + ++ A
Sbjct: 13 NNA--HIQQVG----DRCYDEKMYDAAKLLYNNV-------SNFGRLASTLVHLGEYQAA 59
Query: 214 LSLALNENAADVWYNISHVAIGISDTRLA-IQCLHLALSIDSSHGLSQNNLAVLEAREGH 272
+ A N+ W + + + RLA + LH+ + D L G+
Sbjct: 60 VDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQ-----DRGY 114
Query: 273 IERASTYLQAAAASSPYLYETHYNQAV 299
E T L+AA A+
Sbjct: 115 FEELITMLEAALGLERAHMGMFTELAI 141
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.131 0.372
Gapped
Lambda K H
0.267 0.0500 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,143,037
Number of extensions: 47672
Number of successful extensions: 204
Number of sequences better than 10.0: 1
Number of HSP's gapped: 164
Number of HSP's successfully gapped: 62
Length of query: 341
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 255
Effective length of database: 1,226,816
Effective search space: 312838080
Effective search space used: 312838080
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (24.7 bits)