BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy16618
         (51 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q6DN14|MCTP1_HUMAN Multiple C2 and transmembrane domain-containing protein 1 OS=Homo
           sapiens GN=MCTP1 PE=2 SV=2
          Length = 999

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/33 (60%), Positives = 26/33 (78%)

Query: 1   MGSASIDLTTLELGRCTDLILTLEDPNKPEENL 33
           MGSA +DLT LEL R TD+ LTL+DP+ P+ +L
Sbjct: 340 MGSAFLDLTQLELNRPTDVTLTLKDPHYPDHDL 372


>sp|Q6DN12|MCTP2_HUMAN Multiple C2 and transmembrane domain-containing protein 2 OS=Homo
           sapiens GN=MCTP2 PE=1 SV=3
          Length = 878

 Score = 38.1 bits (87), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/40 (47%), Positives = 27/40 (67%)

Query: 1   MGSASIDLTTLELGRCTDLILTLEDPNKPEENLEYVGYNV 40
           MGSA + L+ LEL R T+ IL LEDPN  E+++  +  N+
Sbjct: 272 MGSAFVILSDLELNRTTEHILKLEDPNSLEDDMGVIVLNL 311


>sp|Q5RJH2|MCTP2_MOUSE Multiple C2 and transmembrane domain-containing protein 2 OS=Mus
           musculus GN=Mctp2 PE=2 SV=1
          Length = 878

 Score = 37.0 bits (84), Expect = 0.035,   Method: Composition-based stats.
 Identities = 19/40 (47%), Positives = 26/40 (65%)

Query: 1   MGSASIDLTTLELGRCTDLILTLEDPNKPEENLEYVGYNV 40
           MGSA + L  LEL R T+ IL LEDPN  E+++  +  N+
Sbjct: 272 MGSAFVVLRDLELNRTTEHILKLEDPNSLEDDMGVIVLNL 311


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.311    0.133    0.371 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,578,758
Number of Sequences: 539616
Number of extensions: 509463
Number of successful extensions: 1108
Number of sequences better than 100.0: 6
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1104
Number of HSP's gapped (non-prelim): 6
length of query: 51
length of database: 191,569,459
effective HSP length: 24
effective length of query: 27
effective length of database: 178,618,675
effective search space: 4822704225
effective search space used: 4822704225
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)