BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16628
(107 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O95487|SC24B_HUMAN Protein transport protein Sec24B OS=Homo sapiens GN=SEC24B PE=1
SV=2
Length = 1268
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 33 LYFMVVKGYACYCKYQALQREVLLNQLKSMPGDRRTSIAIITYDSAVHFYSLAEGQTQPS 92
L+ + V A Y + + LL L +PGD RT I +T+DS +HFY+L EG +QP
Sbjct: 681 LFVLDVSHNAVEAGYLTILCQSLLENLDKLPGDSRTRIGFMTFDSTIHFYNLQEGLSQPQ 740
Query: 93 QMILTDIDDIFLPSP 107
+I++DIDD+FLP+P
Sbjct: 741 MLIVSDIDDVFLPTP 755
>sp|Q3U2P1|SC24A_MOUSE Protein transport protein Sec24A OS=Mus musculus GN=Sec24a PE=1
SV=1
Length = 1090
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 41/55 (74%)
Query: 53 EVLLNQLKSMPGDRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLPSP 107
+ LL+ L +PG+ RT I IT+DS +HFYSL EG +QP +I++DIDD+F+P P
Sbjct: 524 QSLLDNLDLLPGNTRTKIGFITFDSTIHFYSLQEGLSQPQMLIVSDIDDVFIPMP 578
>sp|A6QNT8|SC24A_BOVIN Protein transport protein Sec24A OS=Bos taurus GN=SEC24A PE=2 SV=1
Length = 1099
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 41/55 (74%)
Query: 53 EVLLNQLKSMPGDRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLPSP 107
+ LL+ L +PG+ RT I IT+DS +HFYSL EG +QP +I++DI+D+F+P P
Sbjct: 533 QSLLDNLDLLPGNTRTKIGFITFDSTIHFYSLQEGLSQPQMLIVSDIEDVFIPMP 587
>sp|O95486|SC24A_HUMAN Protein transport protein Sec24A OS=Homo sapiens GN=SEC24A PE=1
SV=2
Length = 1093
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%)
Query: 53 EVLLNQLKSMPGDRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLPSP 107
+ LL+ L +PG+ RT I IT+DS +HFY L E +QP +I++DI+D+F+P P
Sbjct: 527 QSLLDNLDLLPGNTRTKIGFITFDSTIHFYGLQESLSQPQMLIVSDIEDVFIPMP 581
>sp|Q9SFU0|SC24A_ARATH Protein transport protein Sec24-like At3g07100 OS=Arabidopsis
thaliana GN=At3g07100 PE=1 SV=2
Length = 1038
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 32 PLYFMVVKGYACYCKYQALQREVLLNQLKS----MPGDRRTSIAIITYDSAVHFYSLAEG 87
P+YF ++ K L EV+ +KS +PG RT I ITYDS +HFY++
Sbjct: 446 PIYFFLIDVSISATKSGML--EVVAQTIKSCLDNLPGYPRTQIGFITYDSTLHFYNMKSS 503
Query: 88 QTQPSQMILTDIDDIFLPSP 107
+QP M+++D+DDIF+P P
Sbjct: 504 LSQPQMMVVSDLDDIFVPLP 523
>sp|P0CR41|SEC24_CRYNB Protein transport protein SEC24 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=SEC24 PE=3
SV=1
Length = 920
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 32 PLYFMV--VKGYACYCKYQALQREVLLNQLKSMP-GDRRTSIAIITYDSAVHFYSLAEGQ 88
P+Y V V A A+ +L L S+P D RT +AII +++HF+SL
Sbjct: 322 PVYAFVIDVSSAAIQSGMVAVAARTILESLDSLPNADNRTKVAIIAVSTSLHFFSLPADA 381
Query: 89 TQPSQMILTDIDDIFLPSP 107
T+ +++ D+ D+FLP P
Sbjct: 382 TEAGMLVVPDLTDVFLPKP 400
>sp|Q4P9K4|SEC24_USTMA Protein transport protein SEC24 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=SEC24 PE=3 SV=1
Length = 995
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 49 ALQREVLLNQLKSMPG-DRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLPSP 107
A +L L +P D R I II D+++HF+S+ T+P ++++D+DD+FLP P
Sbjct: 416 ATAARTILETLDRLPNSDNRAKICIIGVDTSLHFFSITPEGTEPDMLVVSDLDDVFLPKP 475
>sp|P0CR40|SEC24_CRYNJ Protein transport protein SEC24 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=SEC24 PE=3 SV=1
Length = 920
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 32 PLYFMV--VKGYACYCKYQALQREVLLNQLKSMP-GDRRTSIAIITYDSAVHFYSLAEGQ 88
P+Y V V A A+ +L L S+P D RT +AII +++HF+SL
Sbjct: 322 PVYAFVIDVSSAAIQSGMVAVAARTILESLDSLPNADNRTKVAIIAVSTSLHFFSLPADA 381
Query: 89 TQPSQMILTDIDDIFLPSP 107
T+ +++ D+ D+FLP P
Sbjct: 382 TEAGMLVVPDLTDVFLPKP 400
>sp|Q6BT80|SEC24_DEBHA Protein transport protein SEC24 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=SEC24 PE=3 SV=2
Length = 924
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 54 VLLNQLKSMPGDRRTS-IAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLPSP 107
+L L +P D +T+ +A I DS +H++ EG +I++DID+ FLPSP
Sbjct: 322 TILESLDRIPNDNKTARVAFIGVDSNLHYFKFNEGLDGTDLLIVSDIDEPFLPSP 376
>sp|Q9M291|SC24C_ARATH Protein transport protein Sec24-like CEF OS=Arabidopsis thaliana
GN=CEF PE=1 SV=3
Length = 1096
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 59 LKSMPGDRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLP 105
L +P RT + I T+DS +HFY+L QP +I+ D+ D++ P
Sbjct: 537 LSDLPEGPRTFVGIATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTP 583
>sp|Q9M081|SC24B_ARATH Protein transport protein Sec24-like At4g32640 OS=Arabidopsis
thaliana GN=At4g32640 PE=1 SV=3
Length = 1080
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 59 LKSMPGDRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLP 105
L +P RT + I T+DS +HFY+L QP +I+ D+ D++ P
Sbjct: 534 LSDLPEGPRTFVGIATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTP 580
>sp|Q9UUI5|SEC24_SCHPO Protein transport protein sec24 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec24 PE=2 SV=1
Length = 926
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 53 EVLLNQLKSMPG-DRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLP 105
+L L +P + R +A I DSA+HF+S++ G + +Q++++D+++ FLP
Sbjct: 353 RAILESLDRIPNKEGRAKVAFIGVDSALHFFSVSPGAEEATQLVVSDLEEPFLP 406
>sp|Q7S4P3|SEC24_NEUCR Protein transport protein sec-24 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=sec-24 PE=3 SV=1
Length = 950
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 49 ALQREVLLNQLKSMP-GDRRTSIAIITYDSAVHFYSL---AEGQTQPSQMILTDIDDIFL 104
A +L+ L +P DRRT + I DS++H++S+ E + S ++++D+D+ FL
Sbjct: 367 ATSARTILDSLDRIPNADRRTRLGFIAVDSSLHYFSVPRDTEENGETSMLVVSDLDEPFL 426
Query: 105 PSP 107
P P
Sbjct: 427 PVP 429
>sp|Q54U61|SEC24_DICDI Protein transport protein SEC24 OS=Dictyostelium discoideum
GN=sec24 PE=3 SV=1
Length = 1013
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 32 PLYFMVVKGYACYCKYQALQREVLLNQLKSMPGD------RRTSIAIITYDSAVHFYSLA 85
P YF +V CY + +N +K+ GD R I+T+D ++HFY+L
Sbjct: 410 PTYFFIVD--VCYESIVSGMLNTAINAIKTTLGDLIEKSNGRARFGIMTFDDSLHFYNLK 467
Query: 86 EGQTQPSQM-ILTDIDDIFLP 105
+ QM ++TD+D +++P
Sbjct: 468 SNPSNRPQMFVVTDMDQVYVP 488
>sp|Q2HH63|SEC24_CHAGB Protein transport protein SEC24 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=SEC24 PE=3 SV=1
Length = 947
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 49 ALQREVLLNQLKSMP-GDRRTSIAIITYDSAVHFYSL---AEGQTQPSQMILTDIDDIFL 104
A +L+ L +P DRRT + I DS++H++S+ ++ + S ++++D+D+ FL
Sbjct: 364 ATSARTILDSLNRIPNADRRTRLGFIAVDSSLHYFSVPKDSDENGETSMLVVSDLDEPFL 423
Query: 105 PSP 107
P P
Sbjct: 424 PVP 426
>sp|A5DSK2|SEC24_LODEL Protein transport protein SEC24 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=SEC24 PE=3 SV=1
Length = 964
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 54 VLLNQLKSMPGDRRTS-IAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLPSP 107
+L L +P + +T+ +A I D+ +H++ EG M++ DID+ FLPSP
Sbjct: 360 TILESLDRIPNENKTARVAFIGVDTNLHYFRFNEGLDGTEIMVVADIDEPFLPSP 414
>sp|A3LRW3|SEC24_PICST Protein transport protein SEC24 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=SEC24 PE=3 SV=2
Length = 907
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 54 VLLNQLKSMPGDRRTS-IAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLPSP 107
+L L +P +T+ +A I DS +H++ EG +I++DID+ FLPSP
Sbjct: 305 TILESLDRIPNKTKTARVAFIGVDSNLHYFRFNEGLDGTEVLIVSDIDEPFLPSP 359
>sp|A2QSG6|SEC24_ASPNC Protein transport protein sec24 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=sec24 PE=3 SV=1
Length = 919
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 64 GDRRTSIAIITYDSAVHFYSLAEG---QTQPSQMILTDIDDIFLPSP 107
DRRT + I DS++H++S+ ++P ++++D+D+ FLP P
Sbjct: 353 ADRRTRLGFIAVDSSLHYFSIPRDGSENSEPRMLVISDLDEPFLPIP 399
>sp|A4QUL1|SEC24_MAGO7 Protein transport protein SEC24 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=SEC24 PE=3 SV=1
Length = 959
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 49 ALQREVLLNQLKSMP-GDRRTSIAIITYDSAVHFYSL---AEGQTQPSQMILTDIDDIFL 104
A +L+ L +P DRRT + I DS++H++++ + + S ++++D+D+ FL
Sbjct: 376 ATSARTILDSLNRIPNADRRTRLGFIAVDSSLHYFAVPKDGDENAETSMLVVSDLDEPFL 435
Query: 105 PSP 107
P P
Sbjct: 436 PVP 438
>sp|Q6FWD3|SC242_CANGA Protein transport protein SEC24-2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=SEC242 PE=3 SV=1
Length = 906
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 55 LLNQLKSMPG-DRRTSIAIITYDSAVHFYS--LAEGQTQPSQMILTDIDDIFLPSP 107
+L+ L+ +P D RT ++I+ D+++H++S L E Q M ++DID+ FLP P
Sbjct: 320 ILDTLEFLPNHDNRTRVSILAVDNSLHYFSIPLDEESDQIRMMDISDIDEPFLPKP 375
>sp|Q1E6U9|SEC24_COCIM Protein transport protein SEC24 OS=Coccidioides immitis (strain RS)
GN=SEC24 PE=3 SV=2
Length = 932
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 3/46 (6%)
Query: 65 DRRTSIAIITYDSAVHFYSLAEGQTQ---PSQMILTDIDDIFLPSP 107
DRRT + I DS++H++++ ++ PS ++++D+D+ FLP P
Sbjct: 365 DRRTRLGFIAVDSSLHYFTIPRDGSESSDPSMLVVSDLDEPFLPIP 410
>sp|Q0CSL7|SEC24_ASPTN Protein transport protein sec24 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=sec24 PE=3 SV=1
Length = 904
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 64 GDRRTSIAIITYDSAVHFYSLAEG---QTQPSQMILTDIDDIFLPSP 107
DRRT + I DS++H++S+ + P ++++D+D+ FLP P
Sbjct: 338 ADRRTRLGFIAVDSSLHYFSIPRDGSENSNPQMLVVSDLDEPFLPIP 384
>sp|Q4WLP1|SEC24_ASPFU Protein transport protein sec24 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=sec24 PE=3 SV=2
Length = 919
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 65 DRRTSIAIITYDSAVHFYSLAEGQTQ---PSQMILTDIDDIFLPSP 107
DRRT + I DS++H++S+ ++ P ++++D+D+ FLP P
Sbjct: 354 DRRTRLGFIAVDSSLHYFSIPRDGSENSDPRMLVISDLDEPFLPIP 399
>sp|A1DP06|SEC24_NEOFI Protein transport protein SEC24 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=sec24
PE=3 SV=1
Length = 919
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 65 DRRTSIAIITYDSAVHFYSLAEGQTQ---PSQMILTDIDDIFLPSP 107
DRRT + I DS++H++S+ ++ P ++++D+D+ FLP P
Sbjct: 354 DRRTRLGFIAVDSSLHYFSIPRDGSENSDPRMLVISDLDEPFLPIP 399
>sp|Q2ULI0|SEC24_ASPOR Protein transport protein sec24 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=sec24 PE=3 SV=1
Length = 913
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
Query: 59 LKSMP-GDRRTSIAIITYDSAVHFYSLAEGQTQ---PSQMILTDIDDIFLPSP 107
L+ +P DRRT + I DS++H++S+ ++ P ++++D+D+ FLP P
Sbjct: 341 LERIPNADRRTRLGFIAVDSSLHYFSIPRDGSENSDPRMLVVSDLDEPFLPIP 393
>sp|Q5B6W0|SEC24_EMENI Protein transport protein sec24 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=sec24
PE=3 SV=1
Length = 908
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 64 GDRRTSIAIITYDSAVHFYSLAEGQTQ---PSQMILTDIDDIFLPSP 107
DRRT + I DS++H++S+ ++ P ++++D+D+ FLP P
Sbjct: 342 ADRRTRLGFIAVDSSLHYFSIPRDGSETSDPRMLVVSDLDEPFLPIP 388
>sp|Q876F5|SC242_SACBA Protein transport protein SEC24-2 OS=Saccharomyces bayanus
GN=SEC242 PE=3 SV=1
Length = 926
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 8/63 (12%)
Query: 53 EVLLNQLKSMPG-DRRTSIAIITYDSAVHFYSLA------EGQT-QPSQMILTDIDDIFL 104
LL L S+P D RT I+I+ D+A+H++ + EG T Q + M + D+++ FL
Sbjct: 327 NTLLQNLDSIPNHDERTRISILCVDNAIHYFKIPLDSDNNEGSTDQINMMDIADLEEPFL 386
Query: 105 PSP 107
P P
Sbjct: 387 PRP 389
>sp|P40482|SEC24_YEAST Protein transport protein SEC24 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SEC24 PE=1 SV=1
Length = 926
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Query: 53 EVLLNQLKSMPG-DRRTSIAIITYDSAVHFYSLA-------EGQTQPSQMILTDIDDIFL 104
LL L S+P D RT I+I+ D+A+H++ + E Q + M + D+++ FL
Sbjct: 327 NTLLQNLDSIPNHDERTRISILCVDNAIHYFKIPLDSENNEESADQINMMDIADLEEPFL 386
Query: 105 PSP 107
P P
Sbjct: 387 PRP 389
>sp|Q0PVD8|SEC24_PICPA Protein transport protein SEC24 OS=Komagataella pastoris GN=SEC24
PE=3 SV=1
Length = 960
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 33 LYFMVVKGYACYCKYQALQREVLLNQLKSMPG-DRRTSIAIITYDSAVHFYSLA-----E 86
L+ + V +A Y A +L+ L +P D R + I DS++HF+++ E
Sbjct: 331 LFVLDVSTHAIQNGYLATVARTILDSLDQIPNKDGRARVGFIGVDSSLHFFTIPQDSEDE 390
Query: 87 GQTQPSQM-ILTDIDDIFLPS 106
Q + M +++D+DD+ +P+
Sbjct: 391 NDAQETSMLVVSDLDDVIVPA 411
>sp|O94855|SC24D_HUMAN Protein transport protein Sec24D OS=Homo sapiens GN=SEC24D PE=1
SV=2
Length = 1032
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 53 EVLLNQLKSMPGDRRTS-----IAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLP 105
E L L+ +P + + + ITY+ +HF+++ QP M++TD+ ++F+P
Sbjct: 463 EELKTMLEKIPKEEQEETSAIRVGFITYNKVLHFFNVKSNLAQPQMMVVTDVGEVFVP 520
>sp|Q5AQ76|SEC24_CANAL Protein transport protein SEC24 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=SEC24 PE=3 SV=1
Length = 928
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 54 VLLNQLKSMPGDRRTS-IAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLPSP 107
+L L +P + +T+ ++ I DS +H+ EG +++ DID+ FLPSP
Sbjct: 329 TILESLDRIPNENKTARVSFIGVDSNLHYIRFNEGLEGTEILVVADIDEPFLPSP 383
>sp|A5DPC0|SEC24_PICGU Protein transport protein SEC24 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=SEC24 PE=3 SV=2
Length = 918
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 32 PLYFMVVKGYACYCKYQALQREV---LLNQLKSMPGDRRTS-IAIITYDSAVHFYSLAEG 87
P+ F+ V + L V +L L +P +T+ +A + DS +H++ EG
Sbjct: 292 PIVFVFVIDVSADAVNSGLTSTVTRTILESLDRIPNQNKTARVAFLGVDSNLHYFRFDEG 351
Query: 88 QTQPSQMILTDIDDIFLPSP 107
+I +D+D+ FLPSP
Sbjct: 352 LEGSELLIASDLDEPFLPSP 371
>sp|P53992|SC24C_HUMAN Protein transport protein Sec24C OS=Homo sapiens GN=SEC24C PE=1
SV=3
Length = 1094
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 70 IAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLP 105
+ +TY+ +HFY++ QP M+++D+ D+F+P
Sbjct: 547 VGFVTYNKVLHFYNVKSSLAQPQMMVVSDVADMFVP 582
>sp|A1CUC3|SEC24_ASPCL Protein transport protein sec24 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=sec24 PE=3 SV=1
Length = 919
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 65 DRRTSIAIITYDSAVHFYSLAEGQTQ---PSQMILTDIDDIFLPSP 107
DRRT + I DS++H++S+ ++ P ++++D+++ FLP P
Sbjct: 354 DRRTRLGFIAVDSSLHYFSIPRDGSENSDPRMLVVSDLEEPFLPIP 399
>sp|Q75B16|SEC24_ASHGO Protein transport protein SEC24 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC24
PE=3 SV=1
Length = 891
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 49 ALQREVLLNQLKSMPG-DRRTSIAIITYDSAVHFYS--LAEGQTQPSQMILTDIDDIFLP 105
A LL L S+P D RT I I+ D +H++S L E M + D+D+ FLP
Sbjct: 299 ATAARTLLESLDSLPNYDERTRITILAVDHTIHYFSVPLDEEGDHIRMMDVVDLDEPFLP 358
Query: 106 SP 107
P
Sbjct: 359 MP 360
>sp|Q875V8|SC241_NAUCC Protein transport protein SEC24-1 OS=Naumovozyma castellii (strain
ATCC 76901 / CBS 4309 / NBRC 1992 / NRRL Y-12630)
GN=SEC241 PE=3 SV=1
Length = 911
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 6/56 (10%)
Query: 57 NQLKSMPG-DRRTSIAIITYDSAVHFYSLA----EGQTQPSQMILTDIDDIFLPSP 107
+ L S+P D RT I+I+ D+ +H++++ EGQ Q M + D+DD F+P P
Sbjct: 326 DNLDSLPNHDGRTRISILCVDNGLHYFAIPSDDQEGQ-QVEMMDVCDLDDAFIPRP 380
>sp|Q86ZK8|SEC24_PODAS Protein transport protein SEC24 OS=Podospora anserina GN=SEC24 PE=3
SV=1
Length = 946
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 7/49 (14%)
Query: 64 GDRRTSIAIITYDSAVHFYSLAE-----GQTQPSQMILTDIDDIFLPSP 107
DRRT + + DS++H++S+ + G+T S ++++D+D+ FLP P
Sbjct: 379 ADRRTRLGFMAVDSSLHYFSVPKDTDENGET--SMLVVSDLDEPFLPVP 425
>sp|Q875V7|SC242_NAUCC Protein transport protein SEC24-2 OS=Naumovozyma castellii (strain
ATCC 76901 / CBS 4309 / NBRC 1992 / NRRL Y-12630)
GN=SEC242 PE=3 SV=1
Length = 912
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 53 EVLLNQLKSMPG-DRRTSIAIITYDSAVHFYSLA----EGQTQPSQMILTDIDDIFLPS 106
L+N L +P D +T I++I DS++H++S+ +G + S ++D+D+ FLP+
Sbjct: 321 NALVNSLDLIPNHDNKTLISLICADSSLHYFSVPLDTEDGPKESSMFDISDLDEPFLPT 379
>sp|Q9USS7|YNB3_SCHPO Uncharacterized protein C4.03c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPBC4.03c PE=2 SV=1
Length = 891
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 35 FMVVKGYACYCK-YQALQREVLLNQL-KSMPGDRRTSIAIITYDSAVHFYSLAEGQTQPS 92
FM+ Y K + E + N L +P D IAI+ +D +V+F++L+ QP
Sbjct: 296 FMIDVSYEASSKGLPKVAAEAIRNILYGPVPLDPNVKIAIVCFDRSVNFFNLSPNLEQPH 355
Query: 93 QMILTDIDDIFLP 105
+ +D+++ F+P
Sbjct: 356 MLAASDLENPFVP 368
>sp|Q6C2T4|SEC24_YARLI Protein transport protein SEC24 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=SEC24 PE=3 SV=1
Length = 934
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 16/75 (21%)
Query: 49 ALQREVLLNQLKSMPG-DRRTSIAIITYDSAVHFYSLAEGQT---------------QPS 92
A + L +P D RT + + DS++H++++ + +P
Sbjct: 340 ATAARTIKESLSRIPNVDNRTRVGFLAVDSSLHYFAIPRKEDVAEGEGEEGEENEWPEPR 399
Query: 93 QMILTDIDDIFLPSP 107
M+++DIDD FLP P
Sbjct: 400 MMVVSDIDDPFLPMP 414
>sp|Q6CLE0|SEC24_KLULA Protein transport protein SEC24 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=SEC24 PE=3 SV=1
Length = 924
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 49 ALQREVLLNQLKSMPG-DRRTSIAIITYDSAVHFY--SLAEGQTQPSQMILTDIDDIFLP 105
A LL L ++P D RT I+II D ++H++ L E + D+D+ FLP
Sbjct: 331 ATAARTLLESLDTIPNHDERTRISIICVDQSLHYFRIPLDEEGDNIKMYDVADLDEPFLP 390
Query: 106 SP 107
SP
Sbjct: 391 SP 392
>sp|P38810|SFB3_YEAST SED5-binding protein 3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SFB3 PE=1 SV=1
Length = 929
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 70 IAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLP 105
+AII YD+ + F++L + I++++DD+FLP
Sbjct: 338 VAIIVYDNKLRFFNLRPDLDNAQEYIVSELDDVFLP 373
>sp|Q6FX11|SC241_CANGA Protein transport protein SEC24-1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=SEC241 PE=3 SV=1
Length = 897
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 53 EVLLNQLKSMPG-DRRTSIAIITYDSAVHFYSLAEGQTQPSQMIL--TDIDDIFLPSP 107
E L QL+ +P D RT I+II D A+H S+ IL DID+ ++P P
Sbjct: 310 ETLKQQLEYLPNRDNRTKISIILVDHALHILSIPADDVSNKFRILDVADIDEPYIPLP 367
>sp|A8BS79|RS3A_GIAIC 40S ribosomal protein S3a OS=Giardia intestinalis (strain ATCC
50803 / WB clone C6) GN=GL50803_16265 PE=3 SV=1
Length = 248
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 5 YVEFRTLHLSNSHAYYTIVWELGIFKCPLYFMVVKGYACYCKY-QALQ-----REVLLNQ 58
+V+ R + + + Y T+ ELG P+ + + K +ALQ R+V++ +
Sbjct: 155 HVKGRVIRMMRAGIYETLHNELGKVSIPVLVTKLSNFEVNAKLTEALQKITMCRDVMIRR 214
Query: 59 LKSMPGDRRTSIAIITYDSAVHFYSLAEGQT 89
+K + R T + T + +LAEGQ+
Sbjct: 215 VKVVKRPRNTMELLSTMHDSNQVRNLAEGQS 245
>sp|Q876F4|SC241_SACBA Protein transport protein SEC24-1 OS=Saccharomyces bayanus
GN=SEC241 PE=3 SV=1
Length = 885
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 33 LYFMVVKGYACYCKYQALQREVLLNQLKSMPG-DRRTSIAIITYDSAVHFY 82
++ + V A A +L L+S+P D RTS++II D A+H++
Sbjct: 240 VFILDVSQNAVRNGLLATSARTILENLESLPNHDGRTSVSIICVDHALHYF 290
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.140 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,830,532
Number of Sequences: 539616
Number of extensions: 1200018
Number of successful extensions: 3482
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 3437
Number of HSP's gapped (non-prelim): 45
length of query: 107
length of database: 191,569,459
effective HSP length: 75
effective length of query: 32
effective length of database: 151,098,259
effective search space: 4835144288
effective search space used: 4835144288
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)