BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16631
(376 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4EFH|A Chain A, Acanthamoeba Actin Complex With Spir Domain D
Length = 375
Score = 457 bits (1176), Expect = e-129, Method: Compositional matrix adjust.
Identities = 213/371 (57%), Positives = 279/371 (75%), Gaps = 5/371 (1%)
Query: 10 QPVVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLL 69
Q +VIDNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L
Sbjct: 6 QALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGIL 65
Query: 70 SIHYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFF 129
++ YP+EHGI+T+W+DME+IW + + N +L+ EEHPVLLTEAPLNP+ NREK +I F
Sbjct: 66 TLKYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 124
Query: 130 ESFNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRD 189
E+FN PA+YV++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+I+R D+AGRD
Sbjct: 125 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 184
Query: 190 VTRYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETTDSE----KHTYVLPD 245
+T YL +L + G +F TTAE EIVR IKEK CY++ + +E T + + +Y LPD
Sbjct: 185 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAASSSALEKSYELPD 244
Query: 246 GSSLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGST 305
G + IG+ RFRAPE LF+P +G ES GIH+ Y +I K D+D+RK LY N+VLSGG+T
Sbjct: 245 GQVITIGNERFRAPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTT 304
Query: 306 LFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDE 365
+F G DR+ E+ AP +KI+I AP ER YS WIGGSILASL TF++MW+SK E+DE
Sbjct: 305 MFPGIADRMQKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 364
Query: 366 DGKRAIHRKTF 376
G +HRK F
Sbjct: 365 SGPSIVHRKCF 375
>pdb|1D4X|A Chain A, Crystal Structure Of Caenorhabditis Elegans Mg-Atp Actin
Complexed With Human Gelsolin Segment 1 At 1.75 A
Resolution
Length = 375
Score = 453 bits (1165), Expect = e-128, Method: Compositional matrix adjust.
Identities = 210/369 (56%), Positives = 277/369 (75%), Gaps = 5/369 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+EHGI+T+W+DME+IW + + N +L+ EEHPVLLTEAPLNP+ NREK +I FE+
Sbjct: 68 KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FN PA+YV++QAVLSLYA+GRTTGVVLDSGDGVTH VPIYEG+A+PH+I+R D+AGRD+T
Sbjct: 127 FNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 186
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + +E T S + +Y LPDG
Sbjct: 187 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 246
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ +G+ RFR PE +F+P +G ES GIH+ Y +I K D+D+RK LY N VLSGG+T++
Sbjct: 247 VITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMY 306
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW+SK+E+DE G
Sbjct: 307 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366
Query: 368 KRAIHRKTF 376
+HRK F
Sbjct: 367 PSIVHRKCF 375
>pdb|1IJJ|A Chain A, The X-Ray Crystal Structure Of The Complex Between Rabbit
Skeletal Muscle Actin And Latrunculin A At 2.85 A
Resolution
pdb|1IJJ|B Chain B, The X-Ray Crystal Structure Of The Complex Between Rabbit
Skeletal Muscle Actin And Latrunculin A At 2.85 A
Resolution
pdb|1P8Z|A Chain A, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin
Residues Val26-Glu156
pdb|1SQK|A Chain A, Crystal Structure Of Ciboulot In Complex With Skeletal
Actin
pdb|1RGI|A Chain A, Crystal Structure Of Gelsolin Domains G1-G3 Bound To Actin
pdb|3CJB|A Chain A, Actin Dimer Cross-Linked By V. Cholerae Martx Toxin And
Complexed With Gelsolin-Segment 1
pdb|3CJC|A Chain A, Actin Dimer Cross-Linked By V. Cholerae Martx Toxin And
Complexed With Dnase I And Gelsolin-Segment 1
pdb|3B5U|A Chain A, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|B Chain B, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|C Chain C, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|D Chain D, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|E Chain E, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|F Chain F, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|G Chain G, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|H Chain H, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|I Chain I, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|J Chain J, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|K Chain K, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|L Chain L, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|M Chain M, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|N Chain N, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3DAW|A Chain A, Structure Of The Actin-Depolymerizing Factor Homology
Domain In Complex With Actin
pdb|2V51|B Chain B, Structure Of Mal-Rpel1 Complexed To Actin
pdb|2V51|D Chain D, Structure Of Mal-Rpel1 Complexed To Actin
pdb|2V52|B Chain B, Structure Of Mal-Rpel2 Complexed To G-Actin
pdb|2VYP|A Chain A, Rabbit-Muscle G-Actin In Complex With Myxobacterial
Rhizopodin
pdb|2VYP|B Chain B, Rabbit-Muscle G-Actin In Complex With Myxobacterial
Rhizopodin
pdb|3FFK|B Chain B, Crystal Structure Of Human Gelsolin Domains G1-G3 Bound To
Actin
pdb|3FFK|E Chain E, Crystal Structure Of Human Gelsolin Domains G1-G3 Bound To
Actin
pdb|2YJE|A Chain A, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJE|B Chain B, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJE|C Chain C, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|A Chain A, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|B Chain B, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|C Chain C, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|D Chain D, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|E Chain E, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|3TU5|A Chain A, Actin Complex With Gelsolin Segment 1 Fused To Cobl
Segment
pdb|4EAH|D Chain D, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
pdb|4EAH|H Chain H, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
pdb|4EAH|G Chain G, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
pdb|4EAH|F Chain F, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
Length = 377
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 212/369 (57%), Positives = 276/369 (74%), Gaps = 5/369 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V DNGSG++KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 10 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 69
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+EHGIIT+W+DME+IW + + N +L+ EEHP LLTEAPLNP+ NREK +I FE+
Sbjct: 70 KYPIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 128
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FNVPA+YV++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR D+AGRD+T
Sbjct: 129 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 188
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + E T S + +Y LPDG
Sbjct: 189 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 248
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P IG ES GIH+ Y +I K D+D+RK LY N V+SGG+T++
Sbjct: 249 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 308
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW++K+E+DE G
Sbjct: 309 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 368
Query: 368 KRAIHRKTF 376
+HRK F
Sbjct: 369 PSIVHRKCF 377
>pdb|1KXP|A Chain A, Crystal Structure Of Human Vitamin D-binding Protein In
Complex With Skeletal Actin
pdb|1M8Q|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1H1V|A Chain A, Gelsolin G4-G6ACTIN COMPLEX
pdb|1RDW|X Chain X, Actin Crystal Dynamics: Structural Implications For
F-Actin Nucleation, Polymerization And Branching
Mediated By The Anti-Parallel Dimer
pdb|1RFQ|A Chain A, Actin Crystal Dynamics: Structural Implications For
F-Actin Nucleation, Polymerization And Branching
Mediated By The Anti-Parallel Dimer
pdb|1RFQ|B Chain B, Actin Crystal Dynamics: Structural Implications For
F-Actin Nucleation, Polymerization And Branching
Mediated By The Anti-Parallel Dimer
pdb|2A5X|A Chain A, Crystal Structure Of A Cross-Linked Actin Dimer
pdb|2ASM|A Chain A, Structure Of Rabbit Actin In Complex With Reidispongiolide
A
pdb|2ASP|A Chain A, Structure Of Rabbit Actin In Complex With Reidispongiolide
C
pdb|2FF3|B Chain B, Crystal Structure Of Gelsolin Domain 1:n-Wasp V2 Motif
Hybrid In Complex With Actin
pdb|2FF6|A Chain A, Crystal Structure Of Gelsolin Domain 1:ciboulot Domain 2
Hybrid In Complex With Actin
pdb|2Q1N|A Chain A, Actin Dimer Cross-Linked Between Residues 41 And 374
pdb|2Q1N|B Chain B, Actin Dimer Cross-Linked Between Residues 41 And 374
pdb|2Q31|A Chain A, Actin Dimer Cross-linked Between Residues 41 And 374 And
Proteolytically Cleaved By Subtilisin Between Residues
47 And 48.
pdb|2Q31|B Chain B, Actin Dimer Cross-linked Between Residues 41 And 374 And
Proteolytically Cleaved By Subtilisin Between Residues
47 And 48.
pdb|2Q36|A Chain A, Actin Dimer Cross-Linked Between Residues 191 And 374 And
Complexed With Kabiramide C
pdb|2Q0R|A Chain A, Structure Of Pectenotoxin-2 Bound To Actin
pdb|3BUZ|B Chain B, Crystal Structure Of Ia-Btad-Actin Complex
pdb|2Y83|O Chain O, Actin Filament Pointed End
pdb|2Y83|P Chain P, Actin Filament Pointed End
pdb|2Y83|Q Chain Q, Actin Filament Pointed End
pdb|2Y83|R Chain R, Actin Filament Pointed End
pdb|2Y83|S Chain S, Actin Filament Pointed End
pdb|2Y83|T Chain T, Actin Filament Pointed End
pdb|3TPQ|A Chain A, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|B Chain B, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|C Chain C, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|D Chain D, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|E Chain E, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3SJH|A Chain A, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-29) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 18-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp- Latrunculin A
pdb|3U8X|A Chain A, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-29) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 18-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U8X|C Chain C, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-29) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 18-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U9D|A Chain A, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-24) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 13-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U9D|C Chain C, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-24) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 13-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U9Z|A Chain A, Crystal Structure Between Actin And A Protein Construct
Containing The First Beta-Thymosin Domain Of Drosophila
Ciboulot (Residues 2-58) With The Three Mutations
N26dQ27KD28S
pdb|3UE5|A Chain A, Ecp-Cleaved Actin In Complex With Spir Domain D
pdb|4GY2|B Chain B, Crystal Structure Of Apo-ia-actin Complex
pdb|4H0T|B Chain B, Crystal Structure Of Ia-adpr-actin Complex
pdb|4H0V|B Chain B, Crystal Structure Of Nad+-ia(e378s)-actin Complex
pdb|4H0X|B Chain B, Crystal Structure Of Nad+-ia(e380a)-actin Complex
pdb|4H0Y|B Chain B, Crystal Structure Of Nad+-ia(e380s)-actin Complex
Length = 375
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 212/369 (57%), Positives = 276/369 (74%), Gaps = 5/369 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V DNGSG++KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 8 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+EHGIIT+W+DME+IW + + N +L+ EEHP LLTEAPLNP+ NREK +I FE+
Sbjct: 68 KYPIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 126
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FNVPA+YV++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR D+AGRD+T
Sbjct: 127 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 186
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + E T S + +Y LPDG
Sbjct: 187 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 246
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P IG ES GIH+ Y +I K D+D+RK LY N V+SGG+T++
Sbjct: 247 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 306
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW++K+E+DE G
Sbjct: 307 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 366
Query: 368 KRAIHRKTF 376
+HRK F
Sbjct: 367 PSIVHRKCF 375
>pdb|2OAN|A Chain A, Structure Of Oxidized Beta-Actin
pdb|2OAN|B Chain B, Structure Of Oxidized Beta-Actin
pdb|2OAN|C Chain C, Structure Of Oxidized Beta-Actin
pdb|2OAN|D Chain D, Structure Of Oxidized Beta-Actin
Length = 375
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 209/369 (56%), Positives = 277/369 (75%), Gaps = 5/369 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+EHGI+T+W+DME+IW + + N +L+ EEHPVLLTEAPLNP+ NREK +I FE+
Sbjct: 68 KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FN PA+YV++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R D+AGRD+T
Sbjct: 127 FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 186
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + +E T S + +Y LPDG
Sbjct: 187 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 246
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P +G ES GIH+ + +I K D+D+RK LY N VLSGG+T++
Sbjct: 247 VITIGNERFRCPEALFQPSFLGMESXGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 306
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW+SK+E+DE G
Sbjct: 307 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366
Query: 368 KRAIHRKTF 376
+HRK F
Sbjct: 367 PSIVHRKCF 375
>pdb|4B1V|A Chain A, Structure Of The Phactr1 Rpel-N Domain Bound To G-Actin
pdb|4B1V|B Chain B, Structure Of The Phactr1 Rpel-N Domain Bound To G-Actin
pdb|4B1Z|A Chain A, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|B Chain B, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|C Chain C, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|D Chain D, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|E Chain E, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|F Chain F, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
Length = 376
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 212/369 (57%), Positives = 276/369 (74%), Gaps = 5/369 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V DNGSG++KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 9 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+EHGIIT+W+DME+IW + + N +L+ EEHP LLTEAPLNP+ NREK +I FE+
Sbjct: 69 KYPIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 127
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FNVPA+YV++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR D+AGRD+T
Sbjct: 128 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 187
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + E T S + +Y LPDG
Sbjct: 188 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 247
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P IG ES GIH+ Y +I K D+D+RK LY N V+SGG+T++
Sbjct: 248 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 307
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW++K+E+DE G
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 367
Query: 368 KRAIHRKTF 376
+HRK F
Sbjct: 368 PSIVHRKCF 376
>pdb|1T44|A Chain A, Structural Basis Of Actin Sequestration By Thymosin-B4:
Implications For Arp23 ACTIVATION
Length = 370
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 212/369 (57%), Positives = 276/369 (74%), Gaps = 5/369 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V DNGSG++KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 3 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+EHGIIT+W+DME+IW + + N +L+ EEHP LLTEAPLNP+ NREK +I FE+
Sbjct: 63 KYPIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 121
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FNVPA+YV++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR D+AGRD+T
Sbjct: 122 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 181
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + E T S + +Y LPDG
Sbjct: 182 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 241
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P IG ES GIH+ Y +I K D+D+RK LY N V+SGG+T++
Sbjct: 242 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 301
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW++K+E+DE G
Sbjct: 302 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 361
Query: 368 KRAIHRKTF 376
+HRK F
Sbjct: 362 PSIVHRKCF 370
>pdb|1LCU|A Chain A, Polylysine Induces An Antiparallel Actin Dimer That
Nucleates Filament Assembly: Crystal Structure At 3.5 A
Resolution
pdb|1LCU|B Chain B, Polylysine Induces An Antiparallel Actin Dimer That
Nucleates Filament Assembly: Crystal Structure At 3.5 A
Resolution
Length = 371
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 212/369 (57%), Positives = 276/369 (74%), Gaps = 5/369 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V DNGSG++KAGFAGD P+ FP+ +GRP+H VM +GD +VG +A+ RG+L++
Sbjct: 4 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQGDSYVGDEAQSKRGILTL 63
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+EHGIIT+W+DME+IW + + N +L+ EEHP LLTEAPLNP+ NREK +I FE+
Sbjct: 64 KYPIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 122
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FNVPA+YV++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR D+AGRD+T
Sbjct: 123 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 182
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + E T S + +Y LPDG
Sbjct: 183 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 242
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P IG ES GIH+ Y +I K D+D+RK LY N V+SGG+T++
Sbjct: 243 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 302
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW++K+E+DE G
Sbjct: 303 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 362
Query: 368 KRAIHRKTF 376
+HRK F
Sbjct: 363 PSIVHRKCF 371
>pdb|3BYH|A Chain A, Model Of Actin-Fimbrin Abd2 Complex
pdb|3LUE|A Chain A, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|B Chain B, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|C Chain C, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|D Chain D, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|E Chain E, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|F Chain F, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|G Chain G, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|H Chain H, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|I Chain I, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|J Chain J, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3J0S|A Chain A, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|B Chain B, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|C Chain C, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|D Chain D, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|E Chain E, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|F Chain F, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|G Chain G, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|H Chain H, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|I Chain I, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|J Chain J, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|K Chain K, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|L Chain L, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3UB5|A Chain A, Profilin:actin With A Wide Open Nucleotide Cleft
Length = 374
Score = 451 bits (1159), Expect = e-127, Method: Compositional matrix adjust.
Identities = 209/369 (56%), Positives = 277/369 (75%), Gaps = 5/369 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 7 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 66
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+EHGI+T+W+DME+IW + + N +L+ EEHPVLLTEAPLNP+ NREK +I FE+
Sbjct: 67 KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 125
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FN PA+YV++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R D+AGRD+T
Sbjct: 126 FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 185
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + +E T S + +Y LPDG
Sbjct: 186 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 245
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P +G ES GIH+ + +I K D+D+RK LY N VLSGG+T++
Sbjct: 246 VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 305
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW+SK+E+DE G
Sbjct: 306 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 365
Query: 368 KRAIHRKTF 376
+HRK F
Sbjct: 366 PSIVHRKCF 374
>pdb|3U4L|A Chain A, Cryocooled Bovine Profilin:actin Crystal Structure To 2.4
A
Length = 375
Score = 451 bits (1159), Expect = e-127, Method: Compositional matrix adjust.
Identities = 209/369 (56%), Positives = 277/369 (75%), Gaps = 5/369 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+EHGI+T+W+DME+IW + + N +L+ EEHPVLLTEAPLNP+ NREK +I FE+
Sbjct: 68 KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FN PA+YV++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R D+AGRD+T
Sbjct: 127 FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 186
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + +E T S + +Y LPDG
Sbjct: 187 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 246
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P +G ES GIH+ + +I K D+D+RK LY N VLSGG+T++
Sbjct: 247 VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 306
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW+SK+E+DE G
Sbjct: 307 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366
Query: 368 KRAIHRKTF 376
+HRK F
Sbjct: 367 PSIVHRKCF 375
>pdb|1NLV|A Chain A, Crystal Structure Of Dictyostelium Discoideum Actin
Complexed With Ca Atp And Human Gelsolin Segment 1
pdb|1NM1|A Chain A, Crystal Structure Of D. Dicsoideum Actin Complexed With
Gelsolin Segment 1 And Mg Atp At 1.8 A Resolution
pdb|1NMD|A Chain A, Crystal Structure Of D. Discoideum Actin-Gelsolin Segment
1 Complex Crystallized In Presence Of Lithium Atp
Length = 375
Score = 449 bits (1156), Expect = e-126, Method: Compositional matrix adjust.
Identities = 208/371 (56%), Positives = 277/371 (74%), Gaps = 5/371 (1%)
Query: 10 QPVVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLL 69
Q +VIDNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L
Sbjct: 6 QALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGIL 65
Query: 70 SIHYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFF 129
++ YP+EHGI+T+W+DME+IW + + N +L+ EEHPVLLTEAPLNP+ NREK +I F
Sbjct: 66 TLKYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 124
Query: 130 ESFNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRD 189
E+FN PA+YV++QAVLSLYA+GRTTG+V+DSGDGV+H VPIYEG+A+PH+I+R D+AGRD
Sbjct: 125 ETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 184
Query: 190 VTRYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETTDSE----KHTYVLPD 245
+T Y+ +L + G +F TTAE EIVR IKEK Y++ + +E T + + +Y LPD
Sbjct: 185 LTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMATAASSSALEKSYELPD 244
Query: 246 GSSLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGST 305
G + IG+ RFR PE LF+P +G ES GIH+ Y +I K D+D+RK LY N+VLSGG+T
Sbjct: 245 GQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTT 304
Query: 306 LFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDE 365
+F G DR+ E+ AP +KI+I AP ER YS WIGGSILASL TF++MW+SK E+DE
Sbjct: 305 MFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 364
Query: 366 DGKRAIHRKTF 376
G +HRK F
Sbjct: 365 SGPSIVHRKCF 375
>pdb|1EQY|A Chain A, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin
Domain 1
pdb|1ESV|A Chain A, Complex Between Latrunculin A:rabbit Muscle Alpha
Actin:human Gelsolin Domain 1
pdb|1MDU|B Chain B, Crystal Structure Of The Chicken Actin Trimer Complexed
With Human Gelsolin Segment 1 (Gs-1)
pdb|1MDU|E Chain E, Crystal Structure Of The Chicken Actin Trimer Complexed
With Human Gelsolin Segment 1 (Gs-1)
pdb|2PBD|A Chain A, Ternary Complex Of Profilin-Actin With The Poly-Pro-Gab
Domain Of Vasp
Length = 377
Score = 449 bits (1154), Expect = e-126, Method: Compositional matrix adjust.
Identities = 211/369 (57%), Positives = 275/369 (74%), Gaps = 5/369 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V DNGSG++KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 10 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 69
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+E GIIT+W+DME+IW + + N +L+ EEHP LLTEAPLNP+ NREK +I FE+
Sbjct: 70 KYPIEXGIITNWDDMEKIWHHTFYN-ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 128
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FNVPA+YV++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR D+AGRD+T
Sbjct: 129 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 188
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + E T S + +Y LPDG
Sbjct: 189 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 248
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P IG ES GIH+ Y +I K D+D+RK LY N V+SGG+T++
Sbjct: 249 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 308
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW++K+E+DE G
Sbjct: 309 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 368
Query: 368 KRAIHRKTF 376
+HRK F
Sbjct: 369 PSIVHRKCF 377
>pdb|3G37|O Chain O, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|P Chain P, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|Q Chain Q, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|R Chain R, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|S Chain S, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|T Chain T, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|U Chain U, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|V Chain V, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|W Chain W, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|X Chain X, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|Y Chain Y, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|Z Chain Z, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
Length = 376
Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust.
Identities = 211/369 (57%), Positives = 275/369 (74%), Gaps = 5/369 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V DNGSG++KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 9 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+E GIIT+W+DME+IW + + N +L+ EEHP LLTEAPLNP+ NREK +I FE+
Sbjct: 69 KYPIEXGIITNWDDMEKIWHHTFYN-ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 127
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FNVPA+YV++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR D+AGRD+T
Sbjct: 128 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 187
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + E T S + +Y LPDG
Sbjct: 188 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 247
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P IG ES GIH+ Y +I K D+D+RK LY N V+SGG+T++
Sbjct: 248 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 307
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW++K+E+DE G
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 367
Query: 368 KRAIHRKTF 376
+HRK F
Sbjct: 368 PSIVHRKCF 376
>pdb|1QZ5|A Chain A, Structure Of Rabbit Actin In Complex With Kabiramide C
pdb|1QZ6|A Chain A, Structure Of Rabbit Actin In Complex With Jaspisamide A
pdb|1S22|A Chain A, Absolute Stereochemistry Of Ulapualide A
pdb|1Y64|A Chain A, Bni1p Formin Homology 2 Domain Complexed With Atp-actin
pdb|1YXQ|A Chain A, Crystal Structure Of Actin In Complex With Swinholide A
pdb|1YXQ|B Chain B, Crystal Structure Of Actin In Complex With Swinholide A
pdb|2A3Z|A Chain A, Ternary Complex Of The Wh2 Domain Of Wasp With Actin-Dnase
I
pdb|2A40|A Chain A, Ternary Complex Of The Wh2 Domain Of Wave With Actin-Dnase
I
pdb|2A40|D Chain D, Ternary Complex Of The Wh2 Domain Of Wave With Actin-Dnase
I
pdb|2A41|A Chain A, Ternary Complex Of The Wh2 Domain Of Wip With Actin-Dnase
I
pdb|2A42|A Chain A, Actin-Dnase I Complex
pdb|2ASO|A Chain A, Structure Of Rabbit Actin In Complex With Sphinxolide B
pdb|1WUA|A Chain A, The Structure Of Aplyronine A-Actin Complex
pdb|2FXU|A Chain A, X-Ray Structure Of Bistramide A- Actin Complex At 1.35 A
Resolution.
pdb|2D1K|A Chain A, Ternary Complex Of The Wh2 Domain Of Mim With Actin-Dnase
I
pdb|2HMP|A Chain A, Uncomplexed Actin Cleaved With Protease Ecp32
pdb|2HMP|B Chain B, Uncomplexed Actin Cleaved With Protease Ecp32
pdb|2Q0U|A Chain A, Structure Of Pectenotoxin-2 And Latrunculin B Bound To
Actin
pdb|1J6Z|A Chain A, Uncomplexed Actin
pdb|1LOT|B Chain B, Crystal Structure Of The Complex Of Actin With Vitamin
D-Binding Protein
pdb|1MA9|B Chain B, Crystal Structure Of The Complex Of Human Vitamin D
Binding Protein And Rabbit Muscle Actin
pdb|1NWK|A Chain A, Crystal Structure Of Monomeric Actin In The Atp State
pdb|2Q97|A Chain A, Complex Of Mammalian Actin With Toxofilin From Toxoplasma
Gondii
pdb|2PAV|A Chain A, Ternary Complex Of Profilin-Actin With The Last Poly-Pro
Of Human Vasp
pdb|2VCP|A Chain A, Crystal Structure Of N-wasp Vc Domain In Complex With
Skeletal Actin
pdb|2VCP|B Chain B, Crystal Structure Of N-wasp Vc Domain In Complex With
Skeletal Actin
pdb|2ZWH|A Chain A, Model For The F-Actin Structure
pdb|3HBT|A Chain A, The Structure Of Native G-Actin
pdb|3M3N|A Chain A, Structure Of A Longitudinal Actin Dimer Assembled By
Tandem W Domains
pdb|3M3N|B Chain B, Structure Of A Longitudinal Actin Dimer Assembled By
Tandem W Domains
pdb|3M1F|A Chain A, Crosslinked Complex Of Actin With First W Domain Of Vibrio
Parahaemolyticus Vopl
pdb|3MFP|A Chain A, Atomic Model Of F-Actin Based On A 6.6 Angstrom Resolution
Cryoem Map
pdb|4A7F|A Chain A, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|D Chain D, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|E Chain E, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|F Chain F, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|A Chain A, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|D Chain D, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|E Chain E, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|F Chain F, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|A Chain A, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|D Chain D, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|E Chain E, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|F Chain F, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7N|A Chain A, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|B Chain B, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|C Chain C, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|D Chain D, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|E Chain E, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4H03|B Chain B, Crystal Structure Of Nad+-ia-actin Complex
Length = 375
Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust.
Identities = 211/369 (57%), Positives = 275/369 (74%), Gaps = 5/369 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V DNGSG++KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 8 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+E GIIT+W+DME+IW + + N +L+ EEHP LLTEAPLNP+ NREK +I FE+
Sbjct: 68 KYPIEXGIITNWDDMEKIWHHTFYN-ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 126
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FNVPA+YV++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR D+AGRD+T
Sbjct: 127 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 186
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + E T S + +Y LPDG
Sbjct: 187 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 246
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P IG ES GIH+ Y +I K D+D+RK LY N V+SGG+T++
Sbjct: 247 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 306
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW++K+E+DE G
Sbjct: 307 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 366
Query: 368 KRAIHRKTF 376
+HRK F
Sbjct: 367 PSIVHRKCF 375
>pdb|2GWJ|A Chain A, Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form
pdb|2GWK|A Chain A, Spvb Adp-Ribosylated Actin: Orthorhombic Crystal Form
pdb|2GWK|B Chain B, Spvb Adp-Ribosylated Actin: Orthorhombic Crystal Form
Length = 371
Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust.
Identities = 211/369 (57%), Positives = 275/369 (74%), Gaps = 5/369 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V DNGSG++KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 4 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 63
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+E GIIT+W+DME+IW + + N +L+ EEHP LLTEAPLNP+ NREK +I FE+
Sbjct: 64 KYPIEXGIITNWDDMEKIWHHTFYN-ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 122
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FNVPA+YV++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR D+AGRD+T
Sbjct: 123 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 182
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + E T S + +Y LPDG
Sbjct: 183 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 242
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P IG ES GIH+ Y +I K D+D+RK LY N V+SGG+T++
Sbjct: 243 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 302
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW++K+E+DE G
Sbjct: 303 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 362
Query: 368 KRAIHRKTF 376
+HRK F
Sbjct: 363 PSIVHRKCF 371
>pdb|3W3D|A Chain A, Crystal Structure Of Smooth Muscle G Actin Dnase I Complex
Length = 374
Score = 448 bits (1152), Expect = e-126, Method: Compositional matrix adjust.
Identities = 213/369 (57%), Positives = 274/369 (74%), Gaps = 5/369 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 7 LVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 66
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+E GIIT+W+DME+IW + + N +L+ EEHP LLTEAPLNP+ NREK +I FE+
Sbjct: 67 KYPIEXGIITNWDDMEKIWHHSFYN-ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 125
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FNVPA+YV++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR D+AGRD+T
Sbjct: 126 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 185
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + E T S + +Y LPDG
Sbjct: 186 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 245
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P IG ES GIH+ Y +I K D+D+RK LY N VLSGG+T++
Sbjct: 246 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMY 305
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW+SK+E+DE G
Sbjct: 306 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAG 365
Query: 368 KRAIHRKTF 376
+HRK F
Sbjct: 366 PSIVHRKCF 374
>pdb|2W49|D Chain D, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|E Chain E, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|F Chain F, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|G Chain G, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|H Chain H, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|I Chain I, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|J Chain J, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|K Chain K, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|L Chain L, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|N Chain N, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|O Chain O, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|P Chain P, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|Q Chain Q, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|R Chain R, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|S Chain S, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|D Chain D, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|E Chain E, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|F Chain F, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|G Chain G, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|H Chain H, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|I Chain I, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|J Chain J, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|K Chain K, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|L Chain L, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|N Chain N, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|O Chain O, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|P Chain P, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|Q Chain Q, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|R Chain R, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|S Chain S, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 372
Score = 447 bits (1151), Expect = e-126, Method: Compositional matrix adjust.
Identities = 210/366 (57%), Positives = 274/366 (74%), Gaps = 5/366 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V DNGSG++KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 8 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+EHGIIT+W+DME+IW + + N +L+ EEHP LLTEAPLNP+ NREK +I FE+
Sbjct: 68 KYPIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 126
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FNVPA+YV++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR D+AGRD+T
Sbjct: 127 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 186
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + E T S + +Y LPDG
Sbjct: 187 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 246
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P IG ES GIH+ Y +I K D+D+RK LY N V+SGG+T++
Sbjct: 247 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 306
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW++K+E+DE G
Sbjct: 307 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 366
Query: 368 KRAIHR 373
+HR
Sbjct: 367 PSIVHR 372
>pdb|2BTF|A Chain A, The Structure Of Crystalline Profilin-Beta-Actin
pdb|1HLU|A Chain A, Structure Of Bovine Beta-Actin-Profilin Complex With Actin
Bound Atp Phosphates Solvent Accessible
Length = 375
Score = 447 bits (1149), Expect = e-126, Method: Compositional matrix adjust.
Identities = 208/369 (56%), Positives = 276/369 (74%), Gaps = 5/369 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+E GI+T+W+DME+IW + + N +L+ EEHPVLLTEAPLNP+ NREK +I FE+
Sbjct: 68 KYPIEXGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FN PA+YV++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R D+AGRD+T
Sbjct: 127 FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 186
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + +E T S + +Y LPDG
Sbjct: 187 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 246
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P +G ES GIH+ + +I K D+D+RK LY N VLSGG+T++
Sbjct: 247 VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 306
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW+SK+E+DE G
Sbjct: 307 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366
Query: 368 KRAIHRKTF 376
+HRK F
Sbjct: 367 PSIVHRKCF 375
>pdb|1YAG|A Chain A, Structure Of The Yeast Actin-human Gelsolin Segment 1
Complex
Length = 375
Score = 446 bits (1147), Expect = e-126, Method: Compositional matrix adjust.
Identities = 207/369 (56%), Positives = 276/369 (74%), Gaps = 5/369 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+VIDNGSG+ KAGFAGD P+ FP+ +GRP+H +M G + D +VG +A+ RG+L++
Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+EHGI+T+W+DME+IW + + N +L+ EEHPVLLTEAP+NP+ NREK +I FE+
Sbjct: 68 RYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFET 126
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FNVPA YVS+QAVLSLY++GRTTG+VLDSGDGVTH VPIY GF++PH+I+R D+AGRD+T
Sbjct: 127 FNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRDLT 186
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETTDSE----KHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + +E T ++ + +Y LPDG
Sbjct: 187 DYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELPDGQ 246
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFRAPE LF P ++G ES GI Y +I K D+D+RK LY NIV+SGG+T+F
Sbjct: 247 VITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMF 306
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G +R+ EI AP +K++I AP ER YS WIGGSILASL TF++MW+SK+E+DE G
Sbjct: 307 PGIAERMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYDESG 366
Query: 368 KRAIHRKTF 376
+H K F
Sbjct: 367 PSIVHHKCF 375
>pdb|3EKS|A Chain A, Crystal Structure Of Monomeric Actin Bound To Cytochalasin
D
pdb|3EKU|A Chain A, Crystal Structure Of Monomeric Actin Bound To Cytochalasin
D
pdb|3EL2|A Chain A, Crystal Structure Of Monomeric Actin Bound To Ca-Atp
Length = 375
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 207/369 (56%), Positives = 275/369 (74%), Gaps = 5/369 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+EHGI+T+W+DME+IW + + N +L+ EEHPVLLTEAPLNP+ NREK +I FE+
Sbjct: 68 KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FN PA+YV++QAVLSLYA+GRTTG+VLDSGDGV+H VPIYEG+A+PH+I+R D+AGRD+T
Sbjct: 127 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 186
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TT E EIVR IKEK CY++ + +E T S + +Y L DG
Sbjct: 187 DYLMKILTERGYSFTTTEEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELKDGQ 246
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P +G E+ GIH+ Y +I K D+D+RK LY N VLSGG+T++
Sbjct: 247 VITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 306
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW+SK+E+DE G
Sbjct: 307 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 366
Query: 368 KRAIHRKTF 376
+HRK F
Sbjct: 367 PSIVHRKCF 375
>pdb|2HF3|A Chain A, Crystal Structure Of Monomeric Actin In The Adp Bound
State
pdb|2HF4|A Chain A, Crystal Structure Of Monomeric Actin In Its Atp-Bound
State
pdb|3MN7|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MN9|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MMV|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MN6|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MN6|F Chain F, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MN6|K Chain K, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
Length = 374
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 207/369 (56%), Positives = 275/369 (74%), Gaps = 5/369 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 7 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 66
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+EHGI+T+W+DME+IW + + N +L+ EEHPVLLTEAPLNP+ NREK +I FE+
Sbjct: 67 KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 125
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FN PA+YV++QAVLSLYA+GRTTG+VLDSGDGV+H VPIYEG+A+PH+I+R D+AGRD+T
Sbjct: 126 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 185
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TT E EIVR IKEK CY++ + +E T S + +Y L DG
Sbjct: 186 DYLMKILTERGYSFTTTEEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELKDGQ 245
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P +G E+ GIH+ Y +I K D+D+RK LY N VLSGG+T++
Sbjct: 246 VITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 305
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW+SK+E+DE G
Sbjct: 306 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 365
Query: 368 KRAIHRKTF 376
+HRK F
Sbjct: 366 PSIVHRKCF 374
>pdb|3M6G|A Chain A, Crystal Structure Of Actin In Complex With Lobophorolide
pdb|3M6G|B Chain B, Crystal Structure Of Actin In Complex With Lobophorolide
Length = 371
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 209/365 (57%), Positives = 273/365 (74%), Gaps = 5/365 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V DNGSG++KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 8 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+EHGIIT+W+DME+IW + + N +L+ EEHP LLTEAPLNP+ NREK +I FE+
Sbjct: 68 KYPIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 126
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FNVPA+YV++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR D+AGRD+T
Sbjct: 127 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 186
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + E T S + +Y LPDG
Sbjct: 187 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 246
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P IG ES GIH+ Y +I K D+D+RK LY N V+SGG+T++
Sbjct: 247 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 306
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW++K+E+DE G
Sbjct: 307 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 366
Query: 368 KRAIH 372
+H
Sbjct: 367 PSIVH 371
>pdb|3CHW|A Chain A, Complex Of Dictyostelium Discoideum Actin With Profilin
And The Last Poly-Pro Of Human Vasp
pdb|3CIP|A Chain A, Complex Of Dictyostelium Discoideum Actin With Gelsolin
Length = 375
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 207/371 (55%), Positives = 275/371 (74%), Gaps = 5/371 (1%)
Query: 10 QPVVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLL 69
Q +VIDNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L
Sbjct: 6 QALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGIL 65
Query: 70 SIHYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFF 129
++ YP+E GI+T+W+DME+IW + + N +L+ EEHPVLLTEAPLNP+ NREK +I F
Sbjct: 66 TLKYPIEXGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 124
Query: 130 ESFNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRD 189
E+FN PA+YV++QAVLSLYA+GRTTG+V+DSGDGV+H VPIYEG+A+PH+I+R D+AGRD
Sbjct: 125 ETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 184
Query: 190 VTRYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETTDSE----KHTYVLPD 245
+T Y+ +L + G +F TTAE EIVR IKEK Y++ + E T + + +Y LPD
Sbjct: 185 LTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSYELPD 244
Query: 246 GSSLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGST 305
G + IG+ RFR PE LF+P +G ES GIH+ Y +I K D+D+RK LY N+VLSGG+T
Sbjct: 245 GQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTT 304
Query: 306 LFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDE 365
+F G DR+ E+ AP +KI+I AP ER YS WIGGSILASL TF++MW+SK E+DE
Sbjct: 305 MFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 364
Query: 366 DGKRAIHRKTF 376
G +HRK F
Sbjct: 365 SGPSIVHRKCF 375
>pdb|1ATN|A Chain A, Atomic Structure Of The Actin:dnase I Complex
Length = 373
Score = 444 bits (1142), Expect = e-125, Method: Compositional matrix adjust.
Identities = 209/366 (57%), Positives = 273/366 (74%), Gaps = 5/366 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V DNGSG++KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 9 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+E GIIT+W+DME+IW + + N +L+ EEHP LLTEAPLNP+ NREK +I FE+
Sbjct: 69 KYPIEXGIITNWDDMEKIWHHTFYN-ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 127
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FNVPA+YV++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR D+AGRD+T
Sbjct: 128 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 187
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + E T S + +Y LPDG
Sbjct: 188 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 247
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P IG ES GIH+ Y +I K D+D+RK LY N V+SGG+T++
Sbjct: 248 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 307
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW++K+E+DE G
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 367
Query: 368 KRAIHR 373
+HR
Sbjct: 368 PSIVHR 373
>pdb|1C0G|A Chain A, Crystal Structure Of 1:1 Complex Between Gelsolin Segment
1 And A DictyosteliumTETRAHYMENA CHIMERA ACTIN (MUTANT
228: Q228kT229AA230YE360H)
Length = 375
Score = 444 bits (1142), Expect = e-125, Method: Compositional matrix adjust.
Identities = 206/371 (55%), Positives = 276/371 (74%), Gaps = 5/371 (1%)
Query: 10 QPVVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLL 69
Q +VIDNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L
Sbjct: 6 QALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGIL 65
Query: 70 SIHYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFF 129
++ YP+E GI+T+W+DME+IW + + N +L+ EEHPVLLTEAPLNP+ NREK +I F
Sbjct: 66 TLKYPIEXGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 124
Query: 130 ESFNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRD 189
E+FN PA+YV++QAVLSLYA+GRTTG+V+DSGDGV+H VPIYEG+A+PH+I+R D+AGRD
Sbjct: 125 ETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 184
Query: 190 VTRYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKE----ETTDSEKHTYVLPD 245
+T Y+ +L + G +F TTAE EIVR IKEK Y++ + E ++ + + +Y LPD
Sbjct: 185 LTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMKAYASSSALEKSYELPD 244
Query: 246 GSSLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGST 305
G + IG+ RFR PE LF+P +G ES GIH+ Y +I K D+D+RK LY N+VLSGG+T
Sbjct: 245 GQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTT 304
Query: 306 LFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDE 365
+F G DR+ E+ AP +KI+I AP ER YS WIGGSILASL TF++MW+SK E+DE
Sbjct: 305 MFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKHEYDE 364
Query: 366 DGKRAIHRKTF 376
G +HRK F
Sbjct: 365 SGPSIVHRKCF 375
>pdb|1DEJ|A Chain A, Crystal Structure Of A DictyosteliumTETRAHYMENA CHIMERA
Actin (Mutant 646: Q228kT229AA230YA231KS232EE360H) IN
Complex With Human Gelsolin Segment 1
Length = 375
Score = 444 bits (1141), Expect = e-125, Method: Compositional matrix adjust.
Identities = 209/372 (56%), Positives = 277/372 (74%), Gaps = 7/372 (1%)
Query: 10 QPVVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLL 69
Q +VIDNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L
Sbjct: 6 QALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGIL 65
Query: 70 SIHYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFF 129
++ YP+E GI+T+W+DME+IW + + N +L+ EEHPVLLTEAPLNP+ NREK +I F
Sbjct: 66 TLKYPIEXGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 124
Query: 130 ESFNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRD 189
E+FN PA+YV++QAVLSLYA+GRTTG+V+DSGDGV+H VPIYEG+A+PH+I+R D+AGRD
Sbjct: 125 ETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 184
Query: 190 VTRYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKE-----ETTDSEKHTYVLP 244
+T Y+ +L + G +F TTAE EIVR IKEK Y++ + E E++ EK +Y LP
Sbjct: 185 LTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMKAYKESSALEK-SYELP 243
Query: 245 DGSSLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGS 304
DG + IG+ RFR PE LF+P +G ES GIH+ Y +I K D+D+RK LY N+VLSGG+
Sbjct: 244 DGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGT 303
Query: 305 TLFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFD 364
T+F G DR+ E+ AP +KI+I AP ER YS WIGGSILASL TF++MW+SK E+D
Sbjct: 304 TMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKHEYD 363
Query: 365 EDGKRAIHRKTF 376
E G +HRK F
Sbjct: 364 ESGPSIVHRKCF 375
>pdb|3CI5|A Chain A, Complex Of Phosphorylated Dictyostelium Discoideum Actin
With Gelsolin
Length = 375
Score = 443 bits (1140), Expect = e-125, Method: Compositional matrix adjust.
Identities = 207/371 (55%), Positives = 274/371 (73%), Gaps = 5/371 (1%)
Query: 10 QPVVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLL 69
Q +VIDNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + D VG +A+ RG+L
Sbjct: 6 QALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSXVGDEAQSKRGIL 65
Query: 70 SIHYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFF 129
++ YP+E GI+T+W+DME+IW + + N +L+ EEHPVLLTEAPLNP+ NREK +I F
Sbjct: 66 TLKYPIEXGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 124
Query: 130 ESFNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRD 189
E+FN PA+YV++QAVLSLYA+GRTTG+V+DSGDGV+H VPIYEG+A+PH+I+R D+AGRD
Sbjct: 125 ETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 184
Query: 190 VTRYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETTDSE----KHTYVLPD 245
+T Y+ +L + G +F TTAE EIVR IKEK Y++ + E T + + +Y LPD
Sbjct: 185 LTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSYELPD 244
Query: 246 GSSLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGST 305
G + IG+ RFR PE LF+P +G ES GIH+ Y +I K D+D+RK LY N+VLSGG+T
Sbjct: 245 GQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTT 304
Query: 306 LFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDE 365
+F G DR+ E+ AP +KI+I AP ER YS WIGGSILASL TF++MW+SK E+DE
Sbjct: 305 MFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 364
Query: 366 DGKRAIHRKTF 376
G +HRK F
Sbjct: 365 SGPSIVHRKCF 375
>pdb|1YVN|A Chain A, The Yeast Actin Val 159 Asn Mutant Complex With Human
Gelsolin Segment 1
Length = 375
Score = 443 bits (1140), Expect = e-125, Method: Compositional matrix adjust.
Identities = 206/369 (55%), Positives = 275/369 (74%), Gaps = 5/369 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+VIDNGSG+ KAGFAGD P+ FP+ +GRP+H +M G + D +VG +A+ RG+L++
Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+EHGI+T+W+DME+IW + + N +L+ EEHPVLLTEAP+NP+ NREK +I FE+
Sbjct: 68 RYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFET 126
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FNVPA YVS+QAVLSLY++GRTTG+VLDSGDG TH VPIY GF++PH+I+R D+AGRD+T
Sbjct: 127 FNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGNTHVVPIYAGFSLPHAILRIDLAGRDLT 186
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETTDSE----KHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + +E T ++ + +Y LPDG
Sbjct: 187 DYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELPDGQ 246
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFRAPE LF P ++G ES GI Y +I K D+D+RK LY NIV+SGG+T+F
Sbjct: 247 VITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMF 306
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G +R+ EI AP +K++I AP ER YS WIGGSILASL TF++MW+SK+E+DE G
Sbjct: 307 PGIAERMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYDESG 366
Query: 368 KRAIHRKTF 376
+H K F
Sbjct: 367 PSIVHHKCF 375
>pdb|3B63|E Chain E, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|H Chain H, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|J Chain J, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|K Chain K, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|N Chain N, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 365
Score = 442 bits (1138), Expect = e-124, Method: Compositional matrix adjust.
Identities = 208/360 (57%), Positives = 271/360 (75%), Gaps = 5/360 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V DNGSG++KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 3 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+EHGIIT+W+DME+IW + + N +L+ EEHP LLTEAPLNP+ NREK +I FE+
Sbjct: 63 KYPIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 121
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FNVPA+YV++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR D+AGRD+T
Sbjct: 122 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 181
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + E T S + +Y LPDG
Sbjct: 182 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 241
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P IG ES GIH+ Y +I K D+D+RK LY N V+SGG+T++
Sbjct: 242 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 301
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW++K+E+DE G
Sbjct: 302 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 361
>pdb|3B63|L Chain L, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|M Chain M, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 365
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 205/360 (56%), Positives = 272/360 (75%), Gaps = 5/360 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 3 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+EHGI+T+W+DME+IW + + N +L+ EEHPVLLTEAPLNP+ NREK +I FE+
Sbjct: 63 KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 121
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FN PA+YV++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R D+AGRD+T
Sbjct: 122 FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 181
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + +E T S + +Y LPDG
Sbjct: 182 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 241
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P +G ES GIH+ + +I K D+D+RK LY N VLSGG+T++
Sbjct: 242 VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 301
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW+SK+E+DE G
Sbjct: 302 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 361
>pdb|3B63|C Chain C, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|I Chain I, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 365
Score = 439 bits (1129), Expect = e-123, Method: Compositional matrix adjust.
Identities = 204/360 (56%), Positives = 272/360 (75%), Gaps = 5/360 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+VIDNGSG+ KAGFAGD P+ FP+ +GRP+H +M G + D +VG +A+ RG+L++
Sbjct: 3 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+EHGI+T+W+DME+IW + + N +L+ EEHPVLLTEAP+NP+ NREK +I FE+
Sbjct: 63 RYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFET 121
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FNVPA YVS+QAVLSLY++GRTTG+VLDSGDGVTH VPIY GF++PH+I+R D+AGRD+T
Sbjct: 122 FNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRDLT 181
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETTDSE----KHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + +E T ++ + +Y LPDG
Sbjct: 182 DYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELPDGQ 241
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFRAPE LF P ++G ES GI Y +I K D+D+RK LY NIV+SGG+T+F
Sbjct: 242 VITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMF 301
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G +R+ EI AP +K++I AP ER YS WIGGSILASL TF++MW+SK+E+DE G
Sbjct: 302 PGIAERMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYDESG 361
>pdb|3A5L|C Chain C, Crystal Structure Of A Dictyostelium P109a Mg2+-Actin In
Complex With Human Gelsolin Segment 1
pdb|3A5N|C Chain C, Crystal Structure Of A Dictyostelium P109a Ca2+-Actin In
Complex With Human Gelsolin Segment 1
Length = 375
Score = 439 bits (1128), Expect = e-123, Method: Compositional matrix adjust.
Identities = 204/371 (54%), Positives = 272/371 (73%), Gaps = 5/371 (1%)
Query: 10 QPVVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLL 69
Q +VIDNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L
Sbjct: 6 QALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGIL 65
Query: 70 SIHYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFF 129
++ YP+E GI+T+W+DME+IW + + N +L+ EEHPVLLTEA LNP+ NREK +I F
Sbjct: 66 TLKYPIEXGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAALNPKANREKMTQIMF 124
Query: 130 ESFNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRD 189
E+FN PA+YV++QAVLSLYA+GRTTG+V+DSGDGV+H VPIYEG+A+PH+I+R D+AGRD
Sbjct: 125 ETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 184
Query: 190 VTRYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETTDSE----KHTYVLPD 245
+T Y+ +L + G +F TTA IVR IKEK Y++ + E T + + +Y LPD
Sbjct: 185 LTDYMMKILTERGYSFTTTAAAAIVRDIKEKLAYVALDFEAEMQTAASSSALEKSYELPD 244
Query: 246 GSSLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGST 305
G + IG+ RFR PE LF+P +G ES GIH+ Y +I K D+D+RK LY N+VLSGG+T
Sbjct: 245 GQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTT 304
Query: 306 LFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDE 365
+F G DR+ E+ AP +KI+I AP ER YS WIGGSILASL TF++MW+SK E+DE
Sbjct: 305 MFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 364
Query: 366 DGKRAIHRKTF 376
G +HRK F
Sbjct: 365 SGPSIVHRKCF 375
>pdb|3A5M|C Chain C, Crystal Structure Of A Dictyostelium P109i Mg2+-Actin In
Complex With Human Gelsolin Segment 1
pdb|3A5O|C Chain C, Crystal Structure Of A Dictyostelium P109i Ca2+-Actin In
Complex With Human Gelsolin Segment 1
Length = 375
Score = 437 bits (1125), Expect = e-123, Method: Compositional matrix adjust.
Identities = 204/371 (54%), Positives = 272/371 (73%), Gaps = 5/371 (1%)
Query: 10 QPVVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLL 69
Q +VIDNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L
Sbjct: 6 QALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGIL 65
Query: 70 SIHYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFF 129
++ YP+E GI+T+W+DME+IW + + N +L+ EEHPVLLTEA LNP+ NREK +I F
Sbjct: 66 TLKYPIEXGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAILNPKANREKMTQIMF 124
Query: 130 ESFNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRD 189
E+FN PA+YV++QAVLSLYA+GRTTG+V+DSGDGV+H VPIYEG+A+PH+I+R D+AGRD
Sbjct: 125 ETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 184
Query: 190 VTRYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETTDSE----KHTYVLPD 245
+T Y+ +L + G +F TTA IVR IKEK Y++ + E T + + +Y LPD
Sbjct: 185 LTDYMMKILTERGYSFTTTAAAAIVRDIKEKLAYVALDFEAEMQTAASSSALEKSYELPD 244
Query: 246 GSSLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGST 305
G + IG+ RFR PE LF+P +G ES GIH+ Y +I K D+D+RK LY N+VLSGG+T
Sbjct: 245 GQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTT 304
Query: 306 LFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDE 365
+F G DR+ E+ AP +KI+I AP ER YS WIGGSILASL TF++MW+SK E+DE
Sbjct: 305 MFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 364
Query: 366 DGKRAIHRKTF 376
G +HRK F
Sbjct: 365 SGPSIVHRKCF 375
>pdb|3B63|A Chain A, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|G Chain G, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 365
Score = 436 bits (1122), Expect = e-123, Method: Compositional matrix adjust.
Identities = 203/360 (56%), Positives = 271/360 (75%), Gaps = 5/360 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+VIDNGSG+ KAGFAGD P+ FP+ +GRP+H +M G + D +VG +A+ RG+L++
Sbjct: 3 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+EHGI+T+W+DME+IW + + N +L+ EEHPVLLTEAP+NP+ NREK +I FE+
Sbjct: 63 RYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFET 121
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FNVPA YVS+QAVLSLY++GRTTG+VLDSGDG TH VPIY GF++PH+I+R D+AGRD+T
Sbjct: 122 FNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGNTHVVPIYAGFSLPHAILRIDLAGRDLT 181
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETTDSE----KHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + +E T ++ + +Y LPDG
Sbjct: 182 DYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELPDGQ 241
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFRAPE LF P ++G ES GI Y +I K D+D+RK LY NIV+SGG+T+F
Sbjct: 242 VITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMF 301
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G +R+ EI AP +K++I AP ER YS WIGGSILASL TF++MW+SK+E+DE G
Sbjct: 302 PGIAERMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYDESG 361
>pdb|3B63|B Chain B, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 364
Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/360 (57%), Positives = 270/360 (75%), Gaps = 6/360 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V DNGSG++KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 3 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+E GIIT+W+DME+IW + + N +L+ EEHP LLTEAPLNP+ NREK +I FE+
Sbjct: 63 KYPIE-GIITNWDDMEKIWHHTFYN-ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 120
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FNVPA+YV++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR D+AGRD+T
Sbjct: 121 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 180
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + E T S + +Y LPDG
Sbjct: 181 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 240
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P IG ES GIH+ Y +I K D+D+RK LY N V+SGG+T++
Sbjct: 241 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 300
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW++K+E+DE G
Sbjct: 301 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 360
>pdb|3B63|D Chain D, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 357
Score = 434 bits (1115), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/358 (57%), Positives = 269/358 (75%), Gaps = 6/358 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V DNGSG++KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 2 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 61
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+E GIIT+W+DME+IW + + N +L+ EEHP LLTEAPLNP+ NREK +I FE+
Sbjct: 62 KYPIE-GIITNWDDMEKIWHHTFYN-ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 119
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FNVPA+YV++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR D+AGRD+T
Sbjct: 120 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 179
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + E T S + +Y LPDG
Sbjct: 180 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 239
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P IG ES GIH+ Y +I K D+D+RK LY N V+SGG+T++
Sbjct: 240 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 299
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDE 365
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW++K+E+DE
Sbjct: 300 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDE 357
>pdb|1C0F|A Chain A, Crystal Structure Of Dictyostelium Caatp-Actin In Complex
With Gelsolin Segment 1
Length = 368
Score = 433 bits (1114), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/371 (54%), Positives = 271/371 (73%), Gaps = 12/371 (3%)
Query: 10 QPVVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLL 69
Q +VIDNGSG+ KAGFAGD P+ FP+ +GRP+H D +VG +A+ RG+L
Sbjct: 6 QALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTG-------KDSYVGDEAQSKRGIL 58
Query: 70 SIHYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFF 129
++ YP+E GI+T+W+DME+IW + + N +L+ EEHPVLLTEAPLNP+ NREK +I F
Sbjct: 59 TLKYPIEXGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 117
Query: 130 ESFNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRD 189
E+FN PA+YV++QAVLSLYA+GRTTG+V+DSGDGV+H VPIYEG+A+PH+I+R D+AGRD
Sbjct: 118 ETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 177
Query: 190 VTRYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETTDSE----KHTYVLPD 245
+T Y+ +L + G +F TTAE EIVR IKEK Y++ + E T + + +Y LPD
Sbjct: 178 LTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSYELPD 237
Query: 246 GSSLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGST 305
G + IG+ RFR PE LF+P +G ES GIH+ Y +I K D+D+RK LY N+VLSGG+T
Sbjct: 238 GQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTT 297
Query: 306 LFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDE 365
+F G DR+ E+ AP +KI+I AP ER YS WIGGSILASL TF++MW+SK E+DE
Sbjct: 298 MFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 357
Query: 366 DGKRAIHRKTF 376
G +HRK F
Sbjct: 358 SGPSIVHRKCF 368
>pdb|3MN5|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
Length = 359
Score = 430 bits (1106), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/369 (55%), Positives = 267/369 (72%), Gaps = 21/369 (5%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V DNGSG++KAGFAGD P+ FP+ +GR VG +A+ RG+L++
Sbjct: 8 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGR----------------VGDEAQSKRGILTL 51
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+EHGIIT+W+DME+IW + + N +L+ EEHP LLTEAPLNP+ NREK +I FE+
Sbjct: 52 KYPIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 110
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FNVPA+YV++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR D+AGRD+T
Sbjct: 111 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 170
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + E T S + +Y LPDG
Sbjct: 171 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 230
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P IG ES GIH+ Y +I K D+D+RK LY N V+SGG+T++
Sbjct: 231 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 290
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW++K+E+DE G
Sbjct: 291 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 350
Query: 368 KRAIHRKTF 376
+HRK F
Sbjct: 351 PSIVHRKCF 359
>pdb|3B63|F Chain F, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 357
Score = 430 bits (1105), Expect = e-121, Method: Compositional matrix adjust.
Identities = 204/356 (57%), Positives = 267/356 (75%), Gaps = 6/356 (1%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSI 71
+V DNGSG++KAGFAGD P+ FP+ +GRP+H VM G + D +VG +A+ RG+L++
Sbjct: 4 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 63
Query: 72 HYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFES 131
YP+E GIIT+W+DME+IW + + N +L+ EEHP LLTEAPLNP+ NREK +I FE+
Sbjct: 64 KYPIE-GIITNWDDMEKIWHHTFYN-ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 121
Query: 132 FNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVT 191
FNVPA+YV++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+A+PH+IMR D+AGRD+T
Sbjct: 122 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 181
Query: 192 RYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETT----DSEKHTYVLPDGS 247
YL +L + G +F TTAE EIVR IKEK CY++ + E T S + +Y LPDG
Sbjct: 182 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 241
Query: 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLF 307
+ IG+ RFR PE LF+P IG ES GIH+ Y +I K D+D+RK LY N V+SGG+T++
Sbjct: 242 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 301
Query: 308 KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREF 363
G DR+ EI AP +KI+I AP ER YS WIGGSILASL TF++MW++K+E+
Sbjct: 302 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEY 357
>pdb|2P9K|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Atp And Crosslinked With Glutaraldehyde
Length = 394
Score = 320 bits (821), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 164/381 (43%), Positives = 236/381 (61%), Gaps = 20/381 (5%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIR--VMAGALE-GDIFVGPKAEEHRGL 68
VV DNG+G +K G+AG P+ FP+ +GRP IR G +E D+ VG +A E R +
Sbjct: 9 VVCDNGTGFVKCGYAGSNFPEHIFPSLVGRPI-IRSTTKVGNIEIKDLMVGDEASELRSM 67
Query: 69 LSIHYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIF 128
L ++YPME+GI+ +W+DM+ +W Y + ++L + +LLTE P+NP +NREK E+
Sbjct: 68 LEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVM 127
Query: 129 FESFNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGR 188
FE++ +YV++QAVL+LYA G TGVV+DSGDGVTH P+YEGF++PH R DIAGR
Sbjct: 128 FETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGR 187
Query: 189 DVTRYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETTDSEK----HTYVLP 244
D+TRYL LL G F +A+FE VR IKEK CY+ N +E+ E +Y LP
Sbjct: 188 DITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLP 247
Query: 245 DGSSLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGS 304
DG + +G RF APE LF+P LI E G+ ++L+ IQ +D+D R Y++IVLSGGS
Sbjct: 248 DGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGS 307
Query: 305 TLFKGFGDRLLAEIRK-----------NAPKDLKIRISAPQERLYSTWIGGSILASLDTF 353
T++ G RL E+++ KIRI P R + ++GG++LA +
Sbjct: 308 TMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKD 367
Query: 354 K-RMWVSKREFDEDGKRAIHR 373
K W++++E+ E G R + +
Sbjct: 368 KDNFWMTRQEYQEKGVRVLEK 388
>pdb|1K8K|B Chain B, Crystal Structure Of Arp23 COMPLEX
pdb|1TYQ|B Chain B, Crystal Structure Of Arp23 COMPLEX WITH BOUND ATP AND
Calcium
pdb|1U2V|B Chain B, Crystal Structure Of Arp23 COMPLEX WITH BOUND ADP AND
Calcium
pdb|2P9I|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp And Crosslinked With Gluteraldehyde
pdb|2P9L|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX
pdb|2P9N|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9P|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9S|B Chain B, Structure Of Bovine Arp23 COMPLEX CO-Crystallized With
AtpMG2+
pdb|2P9U|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Amp-Pnp And Calcium
pdb|3DXK|B Chain B, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0944636
pdb|3DXM|B Chain B, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0993548
pdb|3RSE|B Chain B, Structural And Biochemical Characterization Of Two Binding
Sites For Nucleation Promoting Factor Wasp-Vca On Arp23
COMPLEX
pdb|3UKR|B Chain B, Crystal Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-666
pdb|3UKU|B Chain B, Structure Of Arp2/3 Complex With Bound Inhibitor Ck-869
pdb|3ULE|B Chain B, Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-869 And Atp
Length = 394
Score = 319 bits (818), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/381 (43%), Positives = 235/381 (61%), Gaps = 20/381 (5%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIR--VMAGALE-GDIFVGPKAEEHRGL 68
VV DNG+G +K G+AG P+ FP +GRP IR G +E D+ VG +A E R +
Sbjct: 9 VVCDNGTGFVKCGYAGSNFPEHIFPALVGRPI-IRSTTKVGNIEIKDLMVGDEASELRSM 67
Query: 69 LSIHYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIF 128
L ++YPME+GI+ +W+DM+ +W Y + ++L + +LLTE P+NP +NREK E+
Sbjct: 68 LEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVM 127
Query: 129 FESFNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGR 188
FE++ +YV++QAVL+LYA G TGVV+DSGDGVTH P+YEGF++PH R DIAGR
Sbjct: 128 FETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGR 187
Query: 189 DVTRYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETTDSEK----HTYVLP 244
D+TRYL LL G F +A+FE VR IKEK CY+ N +E+ E +Y LP
Sbjct: 188 DITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLP 247
Query: 245 DGSSLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGS 304
DG + +G RF APE LF+P LI E G+ ++L+ IQ +D+D R Y++IVLSGGS
Sbjct: 248 DGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGS 307
Query: 305 TLFKGFGDRLLAEIRK-----------NAPKDLKIRISAPQERLYSTWIGGSILASLDTF 353
T++ G RL E+++ KIRI P R + ++GG++LA +
Sbjct: 308 TMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKD 367
Query: 354 K-RMWVSKREFDEDGKRAIHR 373
K W++++E+ E G R + +
Sbjct: 368 KDNFWMTRQEYQEKGVRVLEK 388
>pdb|1K8K|A Chain A, Crystal Structure Of Arp23 COMPLEX
pdb|1TYQ|A Chain A, Crystal Structure Of Arp23 COMPLEX WITH BOUND ATP AND
Calcium
pdb|1U2V|A Chain A, Crystal Structure Of Arp23 COMPLEX WITH BOUND ADP AND
Calcium
pdb|2P9I|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp And Crosslinked With Gluteraldehyde
pdb|2P9K|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Atp And Crosslinked With Glutaraldehyde
pdb|2P9L|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX
pdb|2P9N|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9P|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9S|A Chain A, Structure Of Bovine Arp23 COMPLEX CO-Crystallized With
AtpMG2+
pdb|2P9U|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Amp-Pnp And Calcium
pdb|3DXK|A Chain A, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0944636
pdb|3DXM|A Chain A, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0993548
pdb|3RSE|A Chain A, Structural And Biochemical Characterization Of Two Binding
Sites For Nucleation Promoting Factor Wasp-Vca On Arp23
COMPLEX
pdb|3UKR|A Chain A, Crystal Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-666
pdb|3UKU|A Chain A, Structure Of Arp2/3 Complex With Bound Inhibitor Ck-869
pdb|3ULE|A Chain A, Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-869 And Atp
Length = 418
Score = 220 bits (561), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 142/399 (35%), Positives = 215/399 (53%), Gaps = 45/399 (11%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYI--------GRPKHIRVMAGALEGDIFVGPKAE 63
V+D G+G K G+AG+ P+ P+ I G RVM G + D F+G +A
Sbjct: 8 CVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAI 67
Query: 64 EHRGLLSIHYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREK 123
E + + +P+ HGI+ DW+ MER + V L+ E+H LLTE PLN NRE
Sbjct: 68 E-KPTYATKWPIRHGIVEDWDLMERFMEQVIFK-YLRAEPEDHYFLLTEPPLNTPENREY 125
Query: 124 AAEIFFESFNVPALYVSMQAVLSLYATGRT--------TGVVLDSGDGVTHAVPIYEGFA 175
AEI FESFNVP LY+++QAVL+L A+ + TG V+DSGDGVTH +P+ EG+
Sbjct: 126 TAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYV 185
Query: 176 MPHSIMRNDIAGRDVTRYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEET-- 233
+ I IAGRD+T +++ LLR V E + +KE+ Y+ + VKE
Sbjct: 186 IGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKY 245
Query: 234 -TDSEKH-------TYVLPDGSSLDIGHARFRAPEVLFRPDLIGEE-SEGIHDVLYYAIQ 284
TD K + S+D+G+ RF PE+ F P+ + ++ I +V+ IQ
Sbjct: 246 DTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQ 305
Query: 285 KSDLDLRKVLYQNIVLSGGSTLFKGFGDRLLAEIRKNA----------------PKDLKI 328
+D+R+ LY+NIVLSGGST+F+ FG RL ++++ PK + +
Sbjct: 306 NCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDV 365
Query: 329 RISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDG 367
++ + Y+ W GGS+LAS F ++ +K++++E G
Sbjct: 366 QVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIG 404
>pdb|3DWL|A Chain A, Crystal Structure Of Fission Yeast Arp2/3 Complex Lacking
The Arp2 Subunit
pdb|3DWL|B Chain B, Crystal Structure Of Fission Yeast Arp2/3 Complex Lacking
The Arp2 Subunit
Length = 427
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 211/421 (50%), Gaps = 62/421 (14%)
Query: 9 NQPVVIDNGSGVIKAGFAGDQVPKCCFPNYIG--------------RPK--------HIR 46
N P+++DNG+G K G+AG+ P FP I +P H+
Sbjct: 5 NVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLS 64
Query: 47 VMAGALEGDIFVGPKA-EEHRGLLSIHYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEE 105
+ D F+G A ++ S+ YP+ HG I +W+ MER WQ L+ E+
Sbjct: 65 SKRATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFK-YLRCEPED 123
Query: 106 HPVLLTEAPLNPRRNREKAAEIFFESFNVPALYV-------SMQAVLSLYATGRT-TGVV 157
H LLTE PLNP NRE AEI FESFN LY+ + S T R+ TG V
Sbjct: 124 HYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTV 183
Query: 158 LDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVTRYLKLLLRKEGVNFRTTAEFEIVRTI 217
+DSGDGVTH +P+ EG+ + SI +AGRDVT +++ LLR + + I
Sbjct: 184 VDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRN---EPDSSLKTAERI 240
Query: 218 KEKACYLSSNPVKEETT-DSEKHTY-------VLPDGSSLDIGHARFRAPEVLFRPDLIG 269
KE+ CY+ + VKE + D E Y + +++D+G RF APE+ F P++
Sbjct: 241 KEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIAS 300
Query: 270 EES-EGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLFKGFGDRLLAEIR--------- 319
+ + +++ +Q S +D+RK LY+NIVLSGGSTLFK FG+RL +++
Sbjct: 301 SDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHR 360
Query: 320 -------KNAPKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDGKRAIH 372
K+ D+ + IS ++R + W GGS+LA F +K +++E G
Sbjct: 361 SEMLSGAKSGGVDVNV-ISHKRQR-NAVWFGGSLLAQTPEFGSYCHTKADYEEYGASIAR 418
Query: 373 R 373
R
Sbjct: 419 R 419
>pdb|3QB0|A Chain A, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
pdb|3QB0|B Chain B, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
pdb|3QB0|C Chain C, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
pdb|3QB0|D Chain D, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
Length = 498
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 73/127 (57%), Gaps = 4/127 (3%)
Query: 244 PDGSSLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGG 303
P +S D + + P +P E G+ D++Y +I SD+DLR L N+VL+GG
Sbjct: 363 PAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSDVDLRATLAHNVVLTGG 422
Query: 304 STLFKGFGDRLLAEIRKNAPKDLKIRISAPQ---ERLYSTWIGGSILASLDTFKRMWVSK 360
++ G DRL+ E+ K P LK RI ER Y +W+GGSIL SL TF ++WV K
Sbjct: 423 TSSIPGLSDRLMTELNKILP-SLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGK 481
Query: 361 REFDEDG 367
+E++E G
Sbjct: 482 KEYEEVG 488
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 88/193 (45%), Gaps = 17/193 (8%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGD--IFVGPKAEEHRGLL 69
VVID GS G++G P+ P+ G+ A EG+ IF +E+ G+
Sbjct: 26 VVIDPGSYTTNIGYSGSDFPQSILPSVYGK-------YTADEGNKKIF----SEQSIGIP 74
Query: 70 SIHYPM----EHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAA 125
Y + E+G++ DW+ + WQ+ N+ + P LLTE N NR+K+
Sbjct: 75 RKDYELKPIIENGLVIDWDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSL 134
Query: 126 EIFFESFNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDI 185
E+ E A Y++ + +A GR +V+D G PI +G + S RN I
Sbjct: 135 EVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFI 194
Query: 186 AGRDVTRYLKLLL 198
AG+ + +K L
Sbjct: 195 AGKFINHLIKKAL 207
>pdb|4I6M|A Chain A, Structure Of Arp7-arp9-snf2(hsa)-rtt102 Subcomplex Of
Swi/snf Chromatin Remodeler
Length = 477
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 15/185 (8%)
Query: 12 VVIDNGSGVIKAGFAGDQVPKCCFPN-YIGRPKHIRVMAGALEGDIF-----VGPKAEEH 65
VVI NGS AGF+ ++P+C P+ YI R G IF + AE+
Sbjct: 8 VVIHNGSHRTVAGFSNVELPQCIIPSSYIKRTDE-----GGEAEFIFGTYNXIDAAAEKR 62
Query: 66 RGLLSIHYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNR---E 122
G G+ +W+ +E W+Y+Y + QL+ EE P+++T N + + E
Sbjct: 63 NGDEVYTLVDSQGLPYNWDALEXQWRYLY-DTQLKVSPEELPLVITXPATNGKPDXAILE 121
Query: 123 KAAEIFFESFNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMR 182
+ E+ F+ NVP + ++ + + G+++ V+D G + PI +G + ++++R
Sbjct: 122 RYYELAFDKLNVPVFQIVIEPLAIALSXGKSSAFVIDIGASGCNVTPIIDGIVVKNAVVR 181
Query: 183 NDIAG 187
+ G
Sbjct: 182 SKFGG 186
>pdb|4I6M|B Chain B, Structure Of Arp7-arp9-snf2(hsa)-rtt102 Subcomplex Of
Swi/snf Chromatin Remodeler
Length = 439
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 114/275 (41%), Gaps = 40/275 (14%)
Query: 74 PMEHGIITDWNDMERIWQYVY-------SNDQLQTFSEEH---PVLLTEAPLNPRRNREK 123
P+++G I D + + + ++ +N F E P+LL + + E
Sbjct: 67 PIQNGEIIDISAFTQFLRLIFVSILSDRANKNQDAFEAELSNIPLLLITHHSWSQSDLEI 126
Query: 124 AAEIFFESFNVPALYVSMQAVLSLYAT----GRTTGVVLDSGDGVTHAVPIYEGFAMPHS 179
+ FES + L +Q SL AT ++D G T +PI + + H
Sbjct: 127 ITQYVFESLEINNL---IQLPASLAATYSXISLQNCCIIDVGTHHTDIIPIVDYAQLDHL 183
Query: 180 IMRNDIAGRDVTRYLKLLLRK-EGVNFRTTAEFEIVRTIKEKACYLSS------NPVKEE 232
+ G+ + LK LL + + + + I + + A LSS N ++E
Sbjct: 184 VSSIPXGGQSINDSLKKLLPQWDDDQIESLKKSPIFEVLSDDAKKLSSFDFGNENEDEDE 243
Query: 233 TT----DSEKHTYVLPDGSSLDIGHARFRAPEVLFR--PDLIGEESEGIHDVLYYAIQKS 286
T D E +T+ G+ + +G RF+ L + + +G + I D+
Sbjct: 244 GTLKNSDLEFNTFWDEKGNEIKVGKQRFQGCNNLIKNISNRVGLTLDNIDDI-------- 295
Query: 287 DLDLRKVLYQNIVLSGGSTLFKGFGDRLLAEIRKN 321
+ K +++NI++ GG+T GF + LL ++ K+
Sbjct: 296 --NKAKAVWENIIIVGGTTSISGFKEALLGQLLKD 328
>pdb|4FO0|A Chain A, Human Actin-Related Protein Arp8 In Its Atp-Bound State
Length = 593
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 289 DLRKVLYQNIVLSGGSTLFKGFGDRLLAEIRKNAPKDLKI------RISAPQE---RLYS 339
D +K +Y +I++ GG +F + L I P + I+ P++ RL +
Sbjct: 495 DTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIA 554
Query: 340 TWIGGSILASLDTFKRMWVSKREFDEDGKRAIHRKT 375
W GG++LA LDT + +W+ +RE+ G R + +
Sbjct: 555 -WKGGAVLACLDTTQELWIYQREWQRFGVRMLRERA 589
>pdb|4AM6|A Chain A, C-terminal Domain Of Actin-related Protein Arp8 From S.
Cerevisiae
pdb|4AM6|B Chain B, C-terminal Domain Of Actin-related Protein Arp8 From S.
Cerevisiae
pdb|4AM7|A Chain A, Adp-bound C-terminal Domain Of Actin-related Protein Arp8
From S. Cerevisiae
pdb|4AM7|B Chain B, Adp-bound C-terminal Domain Of Actin-related Protein Arp8
From S. Cerevisiae
Length = 655
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/136 (19%), Positives = 58/136 (42%), Gaps = 4/136 (2%)
Query: 67 GLLSIHYPMEHGIITDWNDMERIWQYVYSNDQLQ---TFSEEHPVLLTEAPLNPRRNREK 123
G ++ P + +D+ ++ ++ +++ L T ++ V+L + + + E
Sbjct: 180 GSFNVKSPYYKSLAELISDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVET 239
Query: 124 AAEIFFESFNVPALYVSMQAVLSLYATG-RTTGVVLDSGDGVTHAVPIYEGFAMPHSIMR 182
+ A+ + +++ + Y G T+ V++ G T + EG + HS +
Sbjct: 240 FIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVVNIGAAETRIACVDEGTVLEHSAIT 299
Query: 183 NDIAGRDVTRYLKLLL 198
D G D+TR L L
Sbjct: 300 LDYGGDDITRLFALFL 315
>pdb|4A6O|A Chain A, Cpgh89cbm32-4, Produced By Clostridium Perfringens, In
Complex With Glcnac-Alpha-1,4-Galactose
pdb|4A6O|B Chain B, Cpgh89cbm32-4, Produced By Clostridium Perfringens, In
Complex With Glcnac-Alpha-1,4-Galactose
Length = 161
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Query: 136 ALYVSMQAVLSLYATGRTTGVVLDS-GDGVTHAVPIYEGFAMPHSIMRNDIAGRDVTRYL 194
A YV++ ++ + +G L + DG ++ I + AMP + D+ G + +L
Sbjct: 24 ANYVNIAENKNVSGSNSQSGNPLSNITDGDLSSLWISDNGAMPANATI-DLEGNNFVDFL 82
Query: 195 KLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETTDSEKHTYVLP 244
+L KEG F+ E E +E ++SN T+ K +Y +P
Sbjct: 83 ELHFEKEGFRFQFKVEVEDESGNRETVLDMTSN------TEDNKKSYNIP 126
>pdb|2ZOO|A Chain A, Crystal Structure Of Nitrite Reductase From
Pseudoalteromonas Haloplanktis Tac125
Length = 442
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 31/171 (18%)
Query: 211 FEIVRTIKEKACYLSSNPVKEETTDSEKHTYVLPDGSSLDIGHARFRAPEVLFRPDLIGE 270
F++ + I E A Y+ N TTD T + + L IG+ P ++ +IGE
Sbjct: 178 FDMAKAIDEDADYVVFNGSVGSTTDENSLTAKVGETVRLYIGNG---GPNLVSSFHVIGE 234
Query: 271 ESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGS------------------TLFKGFGD 312
I D +Y ++ L V ++ +GG+ ++F+ F
Sbjct: 235 ----IFDTVY--VEGGSLKNHNV-QTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNK 287
Query: 313 RLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLD-TFKRMWVSKRE 362
LA ++ P D I E +Y GS + SLD TF ++ + ++
Sbjct: 288 GALAMLKVEGPDDHSIFTGKTAENVYLPE--GSAIQSLDNTFTKITANNKD 336
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,866,839
Number of Sequences: 62578
Number of extensions: 513502
Number of successful extensions: 1240
Number of sequences better than 100.0: 51
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1082
Number of HSP's gapped (non-prelim): 54
length of query: 376
length of database: 14,973,337
effective HSP length: 100
effective length of query: 276
effective length of database: 8,715,537
effective search space: 2405488212
effective search space used: 2405488212
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)