Query psy16631
Match_columns 376
No_of_seqs 168 out of 1341
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 17:49:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16631.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16631hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dwl_A Actin-related protein 3 100.0 7.6E-84 2.6E-88 619.5 22.9 367 6-376 2-422 (427)
2 3qb0_A Actin-related protein 4 100.0 1.7E-81 5.7E-86 608.3 29.6 363 6-376 20-498 (498)
3 2fxu_A Alpha-actin-1, actin, a 100.0 1.4E-77 4.9E-82 571.4 32.5 370 6-376 2-375 (375)
4 1k8k_B ARP2, actin-like protei 100.0 6E-77 2E-81 570.0 14.6 367 6-373 3-388 (394)
5 4fo0_A Actin-related protein 8 100.0 2.8E-75 9.7E-80 587.9 26.6 367 8-376 14-590 (593)
6 1k8k_A ARP3, actin-like protei 100.0 2E-72 6.8E-77 544.0 29.8 368 5-375 1-412 (418)
7 4am6_A Actin-like protein ARP8 100.0 4.3E-62 1.5E-66 475.2 28.9 361 9-376 40-652 (655)
8 1jce_A ROD shape-determining p 100.0 4.5E-36 1.6E-40 282.4 19.7 309 9-355 3-331 (344)
9 3h1q_A Ethanolamine utilizatio 99.9 2.3E-23 7.9E-28 189.2 17.2 244 9-348 28-272 (272)
10 2v7y_A Chaperone protein DNAK; 99.9 2.5E-24 8.7E-29 212.1 11.3 295 10-350 3-350 (509)
11 1dkg_D Molecular chaperone DNA 99.9 5E-24 1.7E-28 203.1 11.0 305 10-350 3-381 (383)
12 3qfu_A 78 kDa glucose-regulate 99.9 1.1E-22 3.9E-27 194.4 15.7 308 9-350 18-392 (394)
13 3i33_A Heat shock-related 70 k 99.9 2.1E-21 7.1E-26 186.3 12.9 309 8-350 22-400 (404)
14 1yuw_A Heat shock cognate 71 k 99.8 6.4E-19 2.2E-23 175.0 15.9 214 106-349 140-378 (554)
15 2kho_A Heat shock protein 70; 99.8 1.5E-18 5.1E-23 174.0 15.2 215 105-350 135-381 (605)
16 4gni_A Putative heat shock pro 99.8 1.1E-18 3.6E-23 167.7 11.4 220 104-352 149-402 (409)
17 3d2f_A Heat shock protein homo 99.7 5.2E-17 1.8E-21 164.2 17.3 213 106-350 139-382 (675)
18 2ych_A Competence protein PILM 99.7 8.9E-17 3E-21 152.6 14.7 168 126-319 157-331 (377)
19 4b9q_A Chaperone protein DNAK; 99.7 7.3E-16 2.5E-20 154.5 19.1 219 105-350 135-381 (605)
20 2fsj_A Hypothetical protein TA 99.7 2.8E-17 9.5E-22 153.9 7.8 179 11-201 23-240 (346)
21 4a2a_A Cell division protein F 99.6 1E-14 3.6E-19 139.5 16.6 198 120-351 169-394 (419)
22 2zgy_A Plasmid segregation pro 99.4 1.2E-12 4.1E-17 121.2 12.6 177 130-348 136-319 (320)
23 4apw_A ALP12; actin-like prote 99.3 6.9E-12 2.4E-16 116.4 12.5 281 11-350 9-324 (329)
24 3js6_A Uncharacterized PARM pr 99.3 6.5E-12 2.2E-16 117.6 12.1 185 11-201 6-232 (355)
25 2d0o_A DIOL dehydratase-reacti 98.8 2.5E-08 8.5E-13 95.2 11.1 177 141-347 390-601 (610)
26 1nbw_A Glycerol dehydratase re 98.8 2.3E-08 8E-13 95.7 10.2 177 141-347 392-603 (607)
27 4ehu_A Activator of 2-hydroxyi 98.1 3.6E-05 1.2E-09 69.1 13.7 176 136-349 73-253 (276)
28 1hux_A Activator of (R)-2-hydr 97.4 0.0011 3.9E-08 59.1 11.5 48 295-350 209-256 (270)
29 2qm1_A Glucokinase; alpha-beta 96.3 0.031 1.1E-06 50.8 11.2 51 125-177 101-158 (326)
30 2ews_A Pantothenate kinase; PA 96.2 0.011 3.9E-07 52.8 7.5 49 295-348 237-286 (287)
31 1t6c_A Exopolyphosphatase; alp 96.2 0.012 4E-07 53.6 7.6 75 117-194 95-177 (315)
32 3vgl_A Glucokinase; ROK family 95.9 0.22 7.7E-06 45.1 15.1 51 125-177 89-146 (321)
33 3mdq_A Exopolyphosphatase; str 95.8 0.0092 3.1E-07 54.3 5.2 74 119-194 89-170 (315)
34 4db3_A Glcnac kinase, N-acetyl 95.7 0.15 5.3E-06 46.4 13.3 52 297-348 272-324 (327)
35 2gup_A ROK family protein; sug 95.1 0.058 2E-06 48.2 8.0 52 123-177 86-142 (292)
36 1u6z_A Exopolyphosphatase; alp 94.8 0.071 2.4E-06 51.9 8.2 73 119-194 96-176 (513)
37 2i7n_A Pantothenate kinase 1; 94.5 0.13 4.4E-06 47.3 8.6 73 274-348 284-358 (360)
38 2ch5_A NAGK protein; transfera 94.1 3.2 0.00011 37.6 18.1 91 83-176 49-144 (347)
39 3r8e_A Hypothetical sugar kina 93.8 0.32 1.1E-05 44.0 9.9 51 125-177 110-168 (321)
40 3cet_A Conserved archaeal prot 93.7 0.044 1.5E-06 49.6 3.7 25 153-177 127-151 (334)
41 3hi0_A Putative exopolyphospha 93.3 0.11 3.7E-06 50.5 6.1 73 118-193 99-178 (508)
42 4htl_A Beta-glucoside kinase; 91.4 2 6.7E-05 38.3 11.6 51 297-349 240-290 (297)
43 2aa4_A Mannac kinase, putative 91.2 0.81 2.8E-05 40.5 8.8 51 124-177 88-145 (289)
44 2h3g_X Biosynthetic protein; p 91.0 1.1 3.8E-05 39.4 9.3 18 12-29 3-20 (268)
45 3vov_A Glucokinase, hexokinase 90.7 1.7 6E-05 38.7 10.5 52 125-178 91-149 (302)
46 3djc_A Type III pantothenate k 90.0 2.7 9.3E-05 36.8 10.8 19 11-29 4-22 (266)
47 3cer_A Possible exopolyphospha 89.2 0.45 1.5E-05 43.6 5.4 75 119-194 102-191 (343)
48 2hoe_A N-acetylglucosamine kin 89.1 2.9 0.0001 38.6 11.1 51 125-177 181-236 (380)
49 3bex_A Type III pantothenate k 88.9 2.9 0.0001 36.2 10.1 27 152-179 121-147 (249)
50 1zc6_A Probable N-acetylglucos 87.4 2.9 9.9E-05 37.3 9.5 88 83-177 53-146 (305)
51 3zx3_A Ectonucleoside triphosp 85.3 0.61 2.1E-05 44.3 3.9 89 84-174 89-202 (452)
52 2ap1_A Putative regulator prot 84.4 2.3 8E-05 38.3 7.3 50 126-177 114-170 (327)
53 1z05_A Transcriptional regulat 83.9 4.2 0.00014 38.2 9.2 51 125-177 201-258 (429)
54 2yhw_A Bifunctional UDP-N-acet 83.9 7.2 0.00025 35.3 10.5 46 130-177 129-181 (343)
55 1z6r_A MLC protein; transcript 82.7 7.6 0.00026 36.0 10.3 51 125-177 179-236 (406)
56 1zbs_A Hypothetical protein PG 79.7 15 0.00052 32.2 10.8 70 107-177 62-133 (291)
57 3aap_A Ectonucleoside triphosp 63.3 4.4 0.00015 37.1 3.1 36 153-188 140-177 (353)
58 1zxo_A Conserved hypothetical 59.8 16 0.00054 32.1 6.1 55 123-177 75-131 (291)
59 3epq_A Putative fructokinase; 58.8 9.1 0.00031 34.0 4.4 67 275-348 212-287 (302)
60 2e2o_A Hexokinase; acetate and 52.8 68 0.0023 27.9 9.2 55 107-163 62-117 (299)
61 1saz_A Probable butyrate kinas 52.1 93 0.0032 28.4 10.3 50 296-349 297-347 (381)
62 1saz_A Probable butyrate kinas 42.4 19 0.00066 33.0 3.9 54 123-178 111-200 (381)
63 3htv_A D-allose kinase, alloki 42.1 23 0.00078 31.5 4.2 59 297-355 242-304 (310)
64 2e2o_A Hexokinase; acetate and 40.1 11 0.00039 33.1 1.9 45 297-349 242-286 (299)
65 2yhx_A Hexokinase B; transfera 38.3 28 0.00097 32.9 4.4 52 297-351 386-443 (457)
66 2q2r_A Glucokinase 1, putative 33.6 14 0.00048 33.8 1.4 46 131-177 126-205 (373)
67 3cj1_A Ectonucleoside triphosp 33.1 31 0.0011 32.6 3.7 22 153-174 190-211 (456)
68 3eno_A Putative O-sialoglycopr 31.2 37 0.0013 30.5 3.8 27 295-321 250-276 (334)
69 1bdg_A Hexokinase; phosphotran 30.8 46 0.0016 31.4 4.4 51 298-351 396-447 (451)
70 1cza_N Hexokinase type I; stru 28.2 32 0.0011 35.7 3.2 50 297-350 409-459 (917)
71 3qbx_A Anhydro-N-acetylmuramic 28.1 18 0.00062 33.1 1.1 23 296-318 285-307 (371)
72 2ivn_A O-sialoglycoprotein end 27.3 52 0.0018 29.4 4.1 27 295-321 245-271 (330)
73 2itm_A Xylulose kinase, xylulo 26.5 51 0.0017 31.2 4.0 47 296-350 388-434 (484)
74 3djc_A Type III pantothenate k 26.1 1.2E+02 0.0042 26.1 6.1 49 155-203 4-53 (266)
75 2zf5_O Glycerol kinase; hypert 25.6 87 0.003 29.7 5.5 47 295-350 394-440 (497)
76 3cqy_A Anhydro-N-acetylmuramic 25.5 23 0.00078 32.4 1.3 23 296-318 291-313 (370)
77 1djx_A PLC-D1, phosphoinositid 23.9 61 0.0021 32.0 4.1 45 83-134 235-279 (624)
78 2w40_A Glycerol kinase, putati 23.8 99 0.0034 29.4 5.5 46 296-350 409-454 (503)
79 2dpn_A Glycerol kinase; thermu 23.4 60 0.002 30.9 3.9 46 296-350 400-445 (495)
80 3hz6_A Xylulokinase; xylulose, 23.0 41 0.0014 32.2 2.6 47 295-350 403-450 (511)
81 2jsh_A Appetite-regulating hor 22.5 15 0.00052 19.4 -0.3 14 356-369 9-22 (26)
82 4e1j_A Glycerol kinase; struct 21.7 1.2E+02 0.004 29.1 5.6 47 295-350 426-472 (520)
83 3o8m_A Hexokinase; rnaseh-like 21.0 2.1E+02 0.007 27.2 7.0 82 116-200 36-136 (485)
84 4g9i_A Hydrogenase maturation 20.7 48 0.0016 33.7 2.6 26 295-320 706-731 (772)
85 2zkm_X 1-phosphatidylinositol- 20.5 89 0.0031 31.8 4.6 45 83-134 385-430 (799)
No 1
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.6e-84 Score=619.53 Aligned_cols=367 Identities=38% Similarity=0.670 Sum_probs=316.8
Q ss_pred CCCCCcEEEeCCCcceEEEEcCCCCCCeeccccceecCccc----------------------cccCCCCCCeeeCcchh
Q psy16631 6 VIVNQPVVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIR----------------------VMAGALEGDIFVGPKAE 63 (376)
Q Consensus 6 ~~~~~~vViD~Gs~~~k~G~a~~~~P~~~~ps~v~~~~~~~----------------------~~~~~~~~~~~~g~~~~ 63 (376)
.+..++||||+||+++|+||||++.|+++|||+++++++.. ...+....++++|+++.
T Consensus 2 ~~~~~~iViDnGs~~~KaG~ag~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ea~ 81 (427)
T 3dwl_A 2 ASFNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDAL 81 (427)
T ss_dssp -CCCSCEEECCCSSBC-CEETTSSSCSCCCBCCEECC------------------------------CCSSCCEETHHHH
T ss_pred CCCCCeEEEECCCCeEEEEECCCCCCCCcCCceEEeecccccccccccccccccccccccccccccCcccCCeEEchHHh
Confidence 45778999999999999999999999999999999987531 01123445889999997
Q ss_pred hccC-cceeeccccCCcccCHHHHHHHHHHhhcCccCCCCCCCCcEEEEeCCCCChHhHHHHHHHhhcccCCCceecchh
Q psy16631 64 EHRG-LLSIHYPMEHGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFESFNVPALYVSMQ 142 (376)
Q Consensus 64 ~~~~-~~~~~~p~~~g~i~d~~~~~~~l~~~~~~~~l~~~~~~~~vvl~~~~~~~~~~r~~~~~~lfe~~~~~~v~~~~~ 142 (376)
..+. .+.+++|+++|.|.|||.++.+|+|+|++ .|++++.++|++|+||+++++..|+++++++||.|++|+++++.+
T Consensus 82 ~~~~~~l~~~~Pi~~GvI~dwd~~e~iw~~~~~~-~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~ 160 (427)
T 3dwl_A 82 KKASAGYSLDYPIRHGQIENWDHMERFWQQSLFK-YLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQ 160 (427)
T ss_dssp HTHHHHCCCCCSEETTEECCHHHHHHHHHHHHHT-TSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEH
T ss_pred hCcccCcEEecCcccCeeccHHHHHHHHHHHHhH-hhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecch
Confidence 7664 67889999999999999999999999986 699999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcC--------CceEEEEecCCCceEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhcCCCCccchHHHHH
Q psy16631 143 AVLSLYATG--------RTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVTRYLKLLLRKEGVNFRTTAEFEIV 214 (376)
Q Consensus 143 ~~~a~~~~g--------~~tglVVDiG~~~t~i~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~ 214 (376)
+++|+|++| .+||+|||+|++.|+|+||++|+++.++++++++||++++++|.++|+.+++. ..+.+.+
T Consensus 161 ~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~---~~~~~~~ 237 (427)
T 3dwl_A 161 AVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEP---DSSLKTA 237 (427)
T ss_dssp HHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC-----------CHHH
T ss_pred HHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHcCCC---chhHHHH
Confidence 999999998 68999999999999999999999999999999999999999999999988765 3466899
Q ss_pred HHHHHhcccccCCcccc-c---cCCCCceEEEC--CCCc--EEEeccccccccccccCCCCCCCC-CCCHHHHHHHHHHh
Q psy16631 215 RTIKEKACYLSSNPVKE-E---TTDSEKHTYVL--PDGS--SLDIGHARFRAPEVLFRPDLIGEE-SEGIHDVLYYAIQK 285 (376)
Q Consensus 215 ~~iK~~~~~~~~~~~~~-~---~~~~~~~~~~l--pd~~--~i~v~~~r~~~~E~lF~p~~~~~~-~~~l~~~I~~~i~~ 285 (376)
++||+++||++.++.++ + ......+.|++ |||+ .+.++.+||.+||+||+|++++.+ ..+|+++|.++|.+
T Consensus 238 ~~IKe~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~ 317 (427)
T 3dwl_A 238 ERIKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQS 317 (427)
T ss_dssp HHHHHHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHT
T ss_pred HHHHHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHh
Confidence 99999999999887654 1 11122456777 8887 889999999999999999999988 48999999999999
Q ss_pred CCHHHHHHhhcCeEeccCcccccCHHHHHHHHHHhhC--------------CCCceEEEeCCCCCccchhhhHHHhhccc
Q psy16631 286 SDLDLRKVLYQNIVLSGGSTLFKGFGDRLLAEIRKNA--------------PKDLKIRISAPQERLYSTWIGGSILASLD 351 (376)
Q Consensus 286 ~~~d~r~~l~~nIvl~GG~s~i~Gl~~rl~~eL~~~~--------------~~~~~i~v~~~~~~~~~~w~Gasi~a~l~ 351 (376)
||+|+|+.|++|||||||+|++|||.+||++||+.+. |...+++|..+++|.+++|+||||+|+++
T Consensus 318 c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilasl~ 397 (427)
T 3dwl_A 318 SPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQTP 397 (427)
T ss_dssp SCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHHST
T ss_pred CCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecccc
Confidence 9999999999999999999999999999999999886 45678999999999999999999999999
Q ss_pred cccccceeHHHHhhcCchhhhhccC
Q psy16631 352 TFKRMWVSKREFDEDGKRAIHRKTF 376 (376)
Q Consensus 352 ~~~~~~itk~ey~e~G~~~~~~k~~ 376 (376)
+|+++||||+||+|+|+++++|||+
T Consensus 398 ~f~~~witk~EYeE~G~~iv~~~~~ 422 (427)
T 3dwl_A 398 EFGSYCHTKADYEEYGASIARRYQI 422 (427)
T ss_dssp THHHHSEEHHHHHHSCGGGGSCCCC
T ss_pred chhheeEEHHHHhhhChHhheeccc
Confidence 9999999999999999999999984
No 2
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-81 Score=608.26 Aligned_cols=363 Identities=30% Similarity=0.513 Sum_probs=328.1
Q ss_pred CCCCCcEEEeCCCcceEEEEcCCCCCCeeccccceecCccccccCCCCCCeeeCcc-hhhccCcceeeccccCCcccCHH
Q psy16631 6 VIVNQPVVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPK-AEEHRGLLSIHYPMEHGIITDWN 84 (376)
Q Consensus 6 ~~~~~~vViD~Gs~~~k~G~a~~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~p~~~g~i~d~~ 84 (376)
-.+.++||||+||+++|+||+|++.|++++||+++++++. ..+..++|++ +...+..+.+.+|+++|.|.|||
T Consensus 20 gde~~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~------~~~~~~vG~e~~~~~r~~l~l~~Pi~~GvI~dwd 93 (498)
T 3qb0_A 20 GDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTAD------EGNKKIFSEQSIGIPRKDYELKPIIENGLVIDWD 93 (498)
T ss_dssp CCCBSCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSC------SSCCEECCTTGGGSCCTTEEEEESEETTEESCHH
T ss_pred CCCCCeEEEECCCcEEEEEECCCCCeeeecCceeEEeccC------CCccEEEecHHHhcCcCceEEeccCcCCEEccHH
Confidence 3456799999999999999999999999999999997652 1467889997 56667778899999999999999
Q ss_pred HHHHHHHHhhcCccCCCCCCCC-cEEEEeCCCCChHhHHHHHHHhhcccCCCceecchhhhhhhhhcCCceEEEEecCCC
Q psy16631 85 DMERIWQYVYSNDQLQTFSEEH-PVLLTEAPLNPRRNREKAAEIFFESFNVPALYVSMQAVLSLYATGRTTGVVLDSGDG 163 (376)
Q Consensus 85 ~~~~~l~~~~~~~~l~~~~~~~-~vvl~~~~~~~~~~r~~~~~~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVDiG~~ 163 (376)
+++.+|+|+|.+ .|++++.++ |++|+++++++...|+++++++||.|++|+++++.+++|++|++|+++|||||+|++
T Consensus 94 ~~E~iw~~~f~~-~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~tglVVDiG~g 172 (498)
T 3qb0_A 94 TAQEQWQWALQN-ELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHD 172 (498)
T ss_dssp HHHHHHHHHHHH-TSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCSSEEEEEECSS
T ss_pred HHHHHHHHHHHh-hhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCCeEEEEEcCCC
Confidence 999999999976 699999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhc------------------CCCCccc------h-HHHHHHHHH
Q psy16631 164 VTHAVPIYEGFAMPHSIMRNDIAGRDVTRYLKLLLRKE------------------GVNFRTT------A-EFEIVRTIK 218 (376)
Q Consensus 164 ~t~i~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~------------------~~~~~~~------~-~~~~~~~iK 218 (376)
.|+|+||++|+++.+++.++++||++++++|.++|+.+ ++.+... . +.+.++++|
T Consensus 173 ~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~~~iv~~iK 252 (498)
T 3qb0_A 173 TCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECK 252 (498)
T ss_dssp CEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHTTTSCCCCSTTEEECSSSCEECCCSSCCCHHHHHHHHHHTHHHHHH
T ss_pred cEEEEEEeCCEEccccceeccccHHHHHHHHHHHHHhccccchhhhcccccccccccCCCccCccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999864 2333211 1 456899999
Q ss_pred HhcccccCC--cccc--ccCCCCceEEECCCCcEEEeccc-cccccccccCCCCCCC-----------------------
Q psy16631 219 EKACYLSSN--PVKE--ETTDSEKHTYVLPDGSSLDIGHA-RFRAPEVLFRPDLIGE----------------------- 270 (376)
Q Consensus 219 ~~~~~~~~~--~~~~--~~~~~~~~~~~lpd~~~i~v~~~-r~~~~E~lF~p~~~~~----------------------- 270 (376)
|++|||+.+ +.++ .......+.|+||||+.|.++.| ||.+||+||+|++++.
T Consensus 253 E~~c~Va~~~~~~~~~~~~~~~~~~~yeLPDG~~i~lg~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~~~~~~~~~y~~~~ 332 (498)
T 3qb0_A 253 ETLCHICPTKTLEETKTELSSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVPLK 332 (498)
T ss_dssp HHTCCCCSSCHHHHHHHHHHTCCCEEEECSSSCEEEECHHHHHHHHHTTTSCCGGGSCTTSCCCSSSCCCCCSCCCCCCC
T ss_pred HhhEEecCCccHhHHhhhccCcCceEEECCCCCEEEECchHhhhCchhhCCHhHcCCccccccccccccccccccccccc
Confidence 999999986 3322 12345678999999999999999 9999999999986543
Q ss_pred ---------------------------------------------------------CCCCHHHHHHHHHHhCCHHHHHH
Q psy16631 271 ---------------------------------------------------------ESEGIHDVLYYAIQKSDLDLRKV 293 (376)
Q Consensus 271 ---------------------------------------------------------~~~~l~~~I~~~i~~~~~d~r~~ 293 (376)
+..||+++|.++|.+||+|+|+.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~~cd~d~r~~ 412 (498)
T 3qb0_A 333 RTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSDVDLRAT 412 (498)
T ss_dssp BCC-----------------------------------------------------CCSCCHHHHHHHHHHTSCTTTHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCchHHHHHHHHhCCHHHHHH
Confidence 55799999999999999999999
Q ss_pred hhcCeEeccCcccccCHHHHHHHHHHhhCCCCceEEEeCC---CCCccchhhhHHHhhccccccccceeHHHHhhcCc-h
Q psy16631 294 LYQNIVLSGGSTLFKGFGDRLLAEIRKNAPKDLKIRISAP---QERLYSTWIGGSILASLDTFKRMWVSKREFDEDGK-R 369 (376)
Q Consensus 294 l~~nIvl~GG~s~i~Gl~~rl~~eL~~~~~~~~~i~v~~~---~~~~~~~w~Gasi~a~l~~~~~~~itk~ey~e~G~-~ 369 (376)
|++||||+||+|++|||.+||++||+.+.| ..+++|..+ ++|.+++|+||||+|++++|+++||||+||+|+|+ +
T Consensus 413 L~~nIvLsGGst~~pGf~~Rl~~El~~l~p-~~~i~v~~~~~~~er~~s~WiGgsilasl~~f~~~witk~EY~E~G~~~ 491 (498)
T 3qb0_A 413 LAHNVVLTGGTSSIPGLSDRLMTELNKILP-SLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVGVER 491 (498)
T ss_dssp HHTTEEEESGGGGSTTHHHHHHHHHHHHST-TSCCCEECCSCTGGGGSHHHHHHHHHHTCHHHHHTSEEHHHHHTTCCHH
T ss_pred HhcCEEEeCCccCchhHHHHHHHHHHHhCC-CCeeEEEcCCCCCccCccEEcccEEEecCcchhceEEEHHHHhhhCcHh
Confidence 999999999999999999999999999999 889999987 68999999999999999999999999999999999 9
Q ss_pred hhhhccC
Q psy16631 370 AIHRKTF 376 (376)
Q Consensus 370 ~~~~k~~ 376 (376)
+++|||.
T Consensus 492 iv~~kc~ 498 (498)
T 3qb0_A 492 LLNDRFR 498 (498)
T ss_dssp HHHHTTC
T ss_pred hccccCc
Confidence 9999994
No 3
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=1.4e-77 Score=571.43 Aligned_cols=370 Identities=57% Similarity=1.009 Sum_probs=334.5
Q ss_pred CCCCCcEEEeCCCcceEEEEcCCCCCCeeccccceecCccccccCCCCCCeeeCcchhhccCcceeeccccCCcccCHHH
Q psy16631 6 VIVNQPVVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSIHYPMEHGIITDWND 85 (376)
Q Consensus 6 ~~~~~~vViD~Gs~~~k~G~a~~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~g~i~d~~~ 85 (376)
+.+.++||||+||+++|+||+|++.|++++||++++++++....+...+.+++|+++...+....+.+|+++|.|.||+.
T Consensus 2 ~~~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~~~~~~~~Pi~~G~i~d~d~ 81 (375)
T 2fxu_A 2 EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDD 81 (375)
T ss_dssp --CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHTTSEEEECSEETTEECCHHH
T ss_pred CCCCceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcCcccceeccccCCcccCHHH
Confidence 34668999999999999999999999999999999987654333334467899999988777888999999999999999
Q ss_pred HHHHHHHhhcCccCCCCCCCCcEEEEeCCCCChHhHHHHHHHhhcccCCCceecchhhhhhhhhcCCceEEEEecCCCce
Q psy16631 86 MERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFESFNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVT 165 (376)
Q Consensus 86 ~~~~l~~~~~~~~l~~~~~~~~vvl~~~~~~~~~~r~~~~~~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVDiG~~~t 165 (376)
++.+|+|+|.+ .|++++.++++++++|++++...|+++++++||.||+++++++++|+||+|++|.++++|||+|+++|
T Consensus 82 ~e~i~~~~~~~-~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~~~~lVvDiG~gtt 160 (375)
T 2fxu_A 82 MEKIWHHTFYN-ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVT 160 (375)
T ss_dssp HHHHHHHHHHT-TSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTCSSEEEEEECSSCE
T ss_pred HHHHHHHHHHH-hcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCCCeEEEEEcCCCce
Confidence 99999999975 69999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeCCeeccccceeecccHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHhcccccCCcccc----ccCCCCceEE
Q psy16631 166 HAVPIYEGFAMPHSIMRNDIAGRDVTRYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKE----ETTDSEKHTY 241 (376)
Q Consensus 166 ~i~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~----~~~~~~~~~~ 241 (376)
+|+||++|+++.++..++++||++++++|.++|..+++++....+.+.++++|+++|+++.++.++ .........|
T Consensus 161 ~v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~ 240 (375)
T 2fxu_A 161 HNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY 240 (375)
T ss_dssp EEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEE
T ss_pred EEeEeECCEEeccceEEeccCHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEE
Confidence 999999999999988899999999999999999998887765567889999999999998776544 1123456789
Q ss_pred ECCCCcEEEeccccccccccccCCCCCCCCCCCHHHHHHHHHHhCCHHHHHHhhcCeEeccCcccccCHHHHHHHHHHhh
Q psy16631 242 VLPDGSSLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLFKGFGDRLLAEIRKN 321 (376)
Q Consensus 242 ~lpd~~~i~v~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~Gl~~rl~~eL~~~ 321 (376)
.+|||+.+.++.+|+.+||.||+|.+++.+..+|+++|.++|.+||+++|+.+++|||||||+|++|||.+||++||..+
T Consensus 241 ~lpdg~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~ 320 (375)
T 2fxu_A 241 ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITAL 320 (375)
T ss_dssp ECTTSCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHH
T ss_pred ECCCCCEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHh
Confidence 99999999999999999999999999998999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEeCCCCCccchhhhHHHhhccccccccceeHHHHhhcCchhhhhccC
Q psy16631 322 APKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSKREFDEDGKRAIHRKTF 376 (376)
Q Consensus 322 ~~~~~~i~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itk~ey~e~G~~~~~~k~~ 376 (376)
.|...+++|..+++|.+++|+||+++|++++|+++||||+||+|+|+++++|||+
T Consensus 321 ~p~~~~v~v~~~~~p~~~~w~G~si~a~l~~f~~~~itk~ey~e~G~~~~~~k~~ 375 (375)
T 2fxu_A 321 APSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 375 (375)
T ss_dssp SCTTCCCCEECCTTTTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGGGC----
T ss_pred CCCCeeEEEEcCCCCCccEEcchHHhhCcccHhhceeeHHHHhhhChHHHhhhcc
Confidence 9988889999999999999999999999999999999999999999999999996
No 4
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=6e-77 Score=569.99 Aligned_cols=367 Identities=44% Similarity=0.810 Sum_probs=159.6
Q ss_pred CCCCCcEEEeCCCcceEEEEcCCCCCCeeccccceecCccccc-c-CCCCCCeeeCcchhhccCcceeeccccCCcccCH
Q psy16631 6 VIVNQPVVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVM-A-GALEGDIFVGPKAEEHRGLLSIHYPMEHGIITDW 83 (376)
Q Consensus 6 ~~~~~~vViD~Gs~~~k~G~a~~~~P~~~~ps~v~~~~~~~~~-~-~~~~~~~~~g~~~~~~~~~~~~~~p~~~g~i~d~ 83 (376)
+.+.++||||+||+++|+||+|++.|++++||+++++++.... . +...+++++|+++...+....+.+|+++|.|.||
T Consensus 3 ~~~~~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~~~~~~~~~Pi~~G~i~dw 82 (394)
T 1k8k_B 3 SQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRSMLEVNYPMENGIVRNW 82 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCEEEEECCCCeEEEeeCCCCCcceeccceeEEEcccccccccCCCCCCeEEChHHHhcCCCceeeccccCCEEecH
Confidence 4456789999999999999999999999999999987764321 0 2233678999999887777889999999999999
Q ss_pred HHHHHHHHHhh-cCccCCCCCCCCcEEEEeCCCCChHhHHHHHHHhhcccCCCceecchhhhhhhhhcCCceEEEEecCC
Q psy16631 84 NDMERIWQYVY-SNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFESFNVPALYVSMQAVLSLYATGRTTGVVLDSGD 162 (376)
Q Consensus 84 ~~~~~~l~~~~-~~~~l~~~~~~~~vvl~~~~~~~~~~r~~~~~~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVDiG~ 162 (376)
|.++.+|+|+| .+ .|++++.++++++++|++++...|+++++++||.||+++++++++++||+|++|.++|+|||+|+
T Consensus 83 d~~e~i~~~~~~~~-~L~~~~~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~~~lVVDiG~ 161 (394)
T 1k8k_B 83 DDMKHLWDYTFGPE-KLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGD 161 (394)
T ss_dssp ------------------------------------------------------------------------CCEEEECS
T ss_pred HHHHHHHHHHhccc-ccCcCCCCCcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCceEEEEEcCC
Confidence 99999999999 75 69999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHhcccccCCccccc----cCCCCc
Q psy16631 163 GVTHAVPIYEGFAMPHSIMRNDIAGRDVTRYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEE----TTDSEK 238 (376)
Q Consensus 163 ~~t~i~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~----~~~~~~ 238 (376)
++|+|+||++|+++.++..++++||++++++|.++|..+++++....+.+.++++|+++|+++.++..+. ......
T Consensus 162 g~T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~ 241 (394)
T 1k8k_B 162 GVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLV 241 (394)
T ss_dssp SCEEEECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTTCCCCTTTTHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTC
T ss_pred CceEeeeeECCEEcccceEEeeccHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhheeEecCHHHHHHhhccCCcCc
Confidence 9999999999999999989999999999999999999988887655678999999999999987764431 123445
Q ss_pred eEEECCCCcEEEeccccccccccccCCCCCCCCCCCHHHHHHHHHHhCCHHHHHHhhcCeEeccCcccccCHHHHHHHHH
Q psy16631 239 HTYVLPDGSSLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLFKGFGDRLLAEI 318 (376)
Q Consensus 239 ~~~~lpd~~~i~v~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~Gl~~rl~~eL 318 (376)
..|++|||+.+.++.+|+.+||+||+|++++.+..+|+++|.++|.+||+|+|+.+++|||||||+|++|||.+||++||
T Consensus 242 ~~~~lpdg~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el 321 (394)
T 1k8k_B 242 ESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREL 321 (394)
T ss_dssp EEEECTTSCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHH
T ss_pred eEEECCCCCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhC-----------CCCceEEEeCCCCCccchhhhHHHhhcccccc-ccceeHHHHhhcCchhhhh
Q psy16631 319 RKNA-----------PKDLKIRISAPQERLYSTWIGGSILASLDTFK-RMWVSKREFDEDGKRAIHR 373 (376)
Q Consensus 319 ~~~~-----------~~~~~i~v~~~~~~~~~~w~Gasi~a~l~~~~-~~~itk~ey~e~G~~~~~~ 373 (376)
..+. |...+++|..+++|.+++|+|||++|++++|+ ++||||+||+|+|+++++|
T Consensus 322 ~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~~itk~eY~e~G~~~~~~ 388 (394)
T 1k8k_B 322 KQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388 (394)
T ss_dssp HHHHHHHTCSSCCCTTCCCCC----------------------------------------------
T ss_pred HHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCCcCCccceeecHHHHhhhCHHHHHh
Confidence 9887 77778999988999999999999999999999 9999999999999999987
No 5
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-75 Score=587.88 Aligned_cols=367 Identities=21% Similarity=0.380 Sum_probs=293.4
Q ss_pred CCCcEEEeCCCcceEEEEcCCCCCCeeccccceecCccccc---------------------------------------
Q psy16631 8 VNQPVVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVM--------------------------------------- 48 (376)
Q Consensus 8 ~~~~vViD~Gs~~~k~G~a~~~~P~~~~ps~v~~~~~~~~~--------------------------------------- 48 (376)
.+.+||||+||.++|+|||||+.|+. +|++|+++......
T Consensus 14 ~~~iIVIdpGS~~~riG~A~d~~P~~-iP~~iar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (593)
T 4fo0_A 14 SNFIIVIHPGSTTLRIGRATDTLPAS-IPHVIARRHKQQGQPLYKDSWLLREGLNKPESNEQRQNGLKMVDQAIWSKKMS 92 (593)
T ss_dssp GGGEEEEECCSSEEEEEETTCSSCEE-EECCEEEECSSTTCCCCBCCSSCCTTTTSTTHHHHHHHHHHHHHHHHHHSCCT
T ss_pred CCCEEEEeCCCCCeEeeecCCCCCCe-eeEEEEEECCCCCCCcccccccccccccccchhhhhhhhHHHHHHHHHHHhhh
Confidence 45689999999999999999999985 59999986431100
Q ss_pred ----------------------------------cCCCCCCeeeCcchhh--ccCcceeeccccCC-----------ccc
Q psy16631 49 ----------------------------------AGALEGDIFVGPKAEE--HRGLLSIHYPMEHG-----------IIT 81 (376)
Q Consensus 49 ----------------------------------~~~~~~~~~~g~~~~~--~~~~~~~~~p~~~g-----------~i~ 81 (376)
.....+++++|++|.. ..+.+.++||+++| .+.
T Consensus 93 ~~~r~~~~s~~~~~~~n~~~~p~~i~~~~~~~~~~~~~~~~~~vG~~al~~~~~~~~~l~~Pi~~G~~n~~~~~~~s~~~ 172 (593)
T 4fo0_A 93 NGTRRIPVSPEQARSYNKQMRPAILDHCSGNKWTNTSHHPEYLVGEEALYVNPLDCYNIHWPIRRGQLNIHPGPGGSLTA 172 (593)
T ss_dssp TSCCCCCCCHHHHHHHHTTCCCEEEESSCSCCCCCCTTCCSEEETHHHHTSCTTSSEEEECSEETTEECCCSSTTCSHHH
T ss_pred cccccCCCcHHHhhhhhccCCCcccCCCCccccccccccccccccHHHhhcCCcccceEecCcccCccccccCCccchhc
Confidence 0112356899999864 35668899999999 467
Q ss_pred CHHHHHHHHHHhhcCccCCCCCCC---CcEEEEeCCCCChHhHHHHHHHhhcccCCCceecchhhhhhhhhcCCceEEEE
Q psy16631 82 DWNDMERIWQYVYSNDQLQTFSEE---HPVLLTEAPLNPRRNREKAAEIFFESFNVPALYVSMQAVLSLYATGRTTGVVL 158 (376)
Q Consensus 82 d~~~~~~~l~~~~~~~~l~~~~~~---~~vvl~~~~~~~~~~r~~~~~~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVV 158 (376)
+|+++|.+|+|+|.+ +|++++++ ||+||++|+++++..|+++++++||.|+||+++++++++||+|++|++|||||
T Consensus 173 ~wdd~e~iw~~~~~~-~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~tglVV 251 (593)
T 4fo0_A 173 VLADIEVIWSHAIQK-YLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLSSTCIV 251 (593)
T ss_dssp HHHHHHHHHHHHHHH-TSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHHHHHH-hcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCCceEEE
Confidence 999999999999986 79998876 89999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCceEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhcCCCCcc-----chHHHHHHHHHHhcccccCCccccc-
Q psy16631 159 DSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVTRYLKLLLRKEGVNFRT-----TAEFEIVRTIKEKACYLSSNPVKEE- 232 (376)
Q Consensus 159 DiG~~~t~i~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~-----~~~~~~~~~iK~~~~~~~~~~~~~~- 232 (376)
|+|++.|+|+||+||+++.+++.++++||++++++|.++|+.+++.+.. ..+++++++||+++||++.+...++
T Consensus 252 DiG~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~d~~~v~~iKe~~c~v~~d~~~~~~ 331 (593)
T 4fo0_A 252 DVGDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLTNKMDCLLLQHLKETFCHLDQDISGLQD 331 (593)
T ss_dssp EECSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHHHHHHHHTTCSCTTCCTTCHHHHHHHHHHHHHHCBCCTTCCSCEE
T ss_pred EeCCCceeeeeeECCEEehhheEEecccHHHHHHHHHHHHHhcCCCccccccccchhHHHHHHHHHHhcccccchHHhhh
Confidence 9999999999999999999999999999999999999999998876542 4578899999999999988654220
Q ss_pred ------c--------------------------------------------------------------------CCCCc
Q psy16631 233 ------T--------------------------------------------------------------------TDSEK 238 (376)
Q Consensus 233 ------~--------------------------------------------------------------------~~~~~ 238 (376)
. .....
T Consensus 332 ~~~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (593)
T 4fo0_A 332 HEFQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQKMTTLQHRSQGDPEDPHDEHYLLATQSKQEQSAKATADR 411 (593)
T ss_dssp EEEEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCCCSSCCEEECC--------------------------------
T ss_pred hhhhcccCCCCceeeEEeccchhhcCchhhcChhhhcccccccchhhhhcccCcccchhhhhhhhcccchhhhhhccccc
Confidence 0 01123
Q ss_pred eEEECCCCcEEEeccccccccccccCCCCCC--------------------------------CCCCCHHHHHHHHHHhC
Q psy16631 239 HTYVLPDGSSLDIGHARFRAPEVLFRPDLIG--------------------------------EESEGIHDVLYYAIQKS 286 (376)
Q Consensus 239 ~~~~lpd~~~i~v~~~r~~~~E~lF~p~~~~--------------------------------~~~~~l~~~I~~~i~~~ 286 (376)
..+.+|+|..+.++.+|+.+||.+|+|+... .+..||+++|.++|.+|
T Consensus 412 ~~~~~p~g~~~~~~~e~~~~pe~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gL~~aI~~SI~~~ 491 (593)
T 4fo0_A 412 KSASKPIGFEGDLRGQSSDLPERLHSQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAISLFEGKALGLDKAILHSIDCC 491 (593)
T ss_dssp -----------------------------------------------------------CHHHHSCCCHHHHHHHHHHTC
T ss_pred ccccCCCCcccccccccccCchhccCcccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhC
Confidence 4577889999999999999999999986421 13468999999999999
Q ss_pred C-HHHHHHhhcCeEeccCcccccCHHHHHHHHHHhhCCCCc-----eEEEeCCC---CCccchhhhHHHhhccccccccc
Q psy16631 287 D-LDLRKVLYQNIVLSGGSTLFKGFGDRLLAEIRKNAPKDL-----KIRISAPQ---ERLYSTWIGGSILASLDTFKRMW 357 (376)
Q Consensus 287 ~-~d~r~~l~~nIvl~GG~s~i~Gl~~rl~~eL~~~~~~~~-----~i~v~~~~---~~~~~~w~Gasi~a~l~~~~~~~ 357 (376)
+ .|+|+.|++|||||||+|++|||.+||++||..++|... +++|++++ +|.+++|+||||+|+|++|+++|
T Consensus 492 ~~~D~r~~L~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~~~aW~GgSilasL~~f~~~w 571 (593)
T 4fo0_A 492 SSDDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACLDTTQELW 571 (593)
T ss_dssp SSHHHHHHHHHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTTTHHHHHHHHHHHCGGGGGTC
T ss_pred CcHHHHHHHhCCEEEEchhhchhcHHHHHHHHHHHhCcchhccccceEEEECCCCCCCCceeeehhhHHHhcCccHHHee
Confidence 8 699999999999999999999999999999999998543 58898876 89999999999999999999999
Q ss_pred eeHHHHhhcCchhhhhccC
Q psy16631 358 VSKREFDEDGKRAIHRKTF 376 (376)
Q Consensus 358 itk~ey~e~G~~~~~~k~~ 376 (376)
|||+||+|+|+++|+|||+
T Consensus 572 Itk~EYeE~G~~il~~kc~ 590 (593)
T 4fo0_A 572 IYQREWQRFGVRMLRERAA 590 (593)
T ss_dssp EEHHHHHHHTTHHHHHHCS
T ss_pred ECHHHHHhhCcHHHhhcCC
Confidence 9999999999999999995
No 6
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=2e-72 Score=543.95 Aligned_cols=368 Identities=38% Similarity=0.652 Sum_probs=327.6
Q ss_pred cCCCCCcEEEeCCCcceEEEEcCCCCCCeeccccceecCcccc--------ccCCCCCCeeeCcchhhccCcceeecccc
Q psy16631 5 DVIVNQPVVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRV--------MAGALEGDIFVGPKAEEHRGLLSIHYPME 76 (376)
Q Consensus 5 ~~~~~~~vViD~Gs~~~k~G~a~~~~P~~~~ps~v~~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~p~~ 76 (376)
|+++.++||||+||+++|+||++++.|++++||+++++++... ..+....++++|+++...+ .+.+.+|++
T Consensus 1 m~~~~~~ivID~Gs~~~k~G~~~~~~p~~~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~~-~~~~~~pi~ 79 (418)
T 1k8k_A 1 MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKP-TYATKWPIR 79 (418)
T ss_dssp --CCSCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC-----------CCCTTGGGCEEEGGGGTSCT-TSEEECCEE
T ss_pred CCCCCCeEEEECCCCeEEEeeCCCCCCCCcCCceEEEECcccccccccccccccccccCeEEChHHHhcC-CCEEecccc
Confidence 3466789999999999999999999999999999998765321 1122234689999997765 478899999
Q ss_pred CCcccCHHHHHHHHHHhhcCccCCCCCCCCcEEEEeCCCCChHhHHHHHHHhhcccCCCceecchhhhhhhhh-------
Q psy16631 77 HGIITDWNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFESFNVPALYVSMQAVLSLYA------- 149 (376)
Q Consensus 77 ~g~i~d~~~~~~~l~~~~~~~~l~~~~~~~~vvl~~~~~~~~~~r~~~~~~lfe~~~~~~v~~~~~~~~a~~~------- 149 (376)
+|.+.|||.++.+|+|+|.+ .|+++++++++++++|++++...|+++.+++||.+|+++++++++|+||+|+
T Consensus 80 ~G~i~d~d~~e~i~~~~~~~-~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~ 158 (418)
T 1k8k_A 80 HGIVEDWDLMERFMEQVIFK-YLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQV 158 (418)
T ss_dssp TTEESCHHHHHHHHHHHHHT-TTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTC
T ss_pred CCEECCHHHHHHHHHHHHHh-ccCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhccccc
Confidence 99999999999999999975 6999999999999999999999999999999999999999999999999998
Q ss_pred --cCCceEEEEecCCCceEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHhcccccCC
Q psy16631 150 --TGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVTRYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSN 227 (376)
Q Consensus 150 --~g~~tglVVDiG~~~t~i~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~iK~~~~~~~~~ 227 (376)
.+. +|+|||+|+++|+|+||++|+++.+++.+.++||++++++|.++|..++.++....+.+.++++|+++|+++.+
T Consensus 159 ~~~~~-~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~ 237 (418)
T 1k8k_A 159 GERTL-TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPD 237 (418)
T ss_dssp CSCCC-CEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCCCCCGGGHHHHHHHHHHHHCCCCSC
T ss_pred CCCCC-eEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhchhccc
Confidence 566 99999999999999999999999999899999999999999999999887776566789999999999999876
Q ss_pred ccccc-----cCCCCceEEECCCCc-----EEEeccccccccccccCCCCCCCCC-CCHHHHHHHHHHhCCHHHHHHhhc
Q psy16631 228 PVKEE-----TTDSEKHTYVLPDGS-----SLDIGHARFRAPEVLFRPDLIGEES-EGIHDVLYYAIQKSDLDLRKVLYQ 296 (376)
Q Consensus 228 ~~~~~-----~~~~~~~~~~lpd~~-----~i~v~~~r~~~~E~lF~p~~~~~~~-~~l~~~I~~~i~~~~~d~r~~l~~ 296 (376)
+..+. ........|.+||+. .+.++.+|+.+||+||+|++++.+. .+|+++|.++|.+||+++|+.+++
T Consensus 238 ~~~e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~ 317 (418)
T 1k8k_A 238 LVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYK 317 (418)
T ss_dssp HHHHHHHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHH
T ss_pred HHHHHHhhcccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHh
Confidence 54330 112234689999998 8999999999999999999888775 799999999999999999999999
Q ss_pred CeEeccCcccccCHHHHHHHHHHhhC----------------CCCceEEEeCCCCCccchhhhHHHhhccccccccceeH
Q psy16631 297 NIVLSGGSTLFKGFGDRLLAEIRKNA----------------PKDLKIRISAPQERLYSTWIGGSILASLDTFKRMWVSK 360 (376)
Q Consensus 297 nIvl~GG~s~i~Gl~~rl~~eL~~~~----------------~~~~~i~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itk 360 (376)
|||||||+|++|||.+||++||.... |...+++|..+++|.+++|+|||++|++++|+++||||
T Consensus 318 ~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~itk 397 (418)
T 1k8k_A 318 NIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTK 397 (418)
T ss_dssp CEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTSHHHHHHSEEH
T ss_pred ceEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcCccHhheEEEH
Confidence 99999999999999999999999875 56678899999999999999999999999999999999
Q ss_pred HHHhhcCchhhhhcc
Q psy16631 361 REFDEDGKRAIHRKT 375 (376)
Q Consensus 361 ~ey~e~G~~~~~~k~ 375 (376)
+||+|+|+++++|||
T Consensus 398 ~ey~e~G~~~~~~~~ 412 (418)
T 1k8k_A 398 KDYEEIGPSICRHNP 412 (418)
T ss_dssp HHHHHHCGGGGGCCC
T ss_pred HHHhhhCHHHHhhhc
Confidence 999999999999977
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=4.3e-62 Score=475.22 Aligned_cols=361 Identities=20% Similarity=0.350 Sum_probs=301.7
Q ss_pred CCcEEEeCCCcceEEEEcCCCCCCeeccccceecCcc---------cc--------------------------------
Q psy16631 9 NQPVVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHI---------RV-------------------------------- 47 (376)
Q Consensus 9 ~~~vViD~Gs~~~k~G~a~~~~P~~~~ps~v~~~~~~---------~~-------------------------------- 47 (376)
..+|||..||.++|+|+|.|..|..+ |++++++... ..
T Consensus 40 ~~~IVIHpGS~~lRIG~AsD~~P~~i-p~~iA~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~k~rmr~~k~r 118 (655)
T 4am6_A 40 TATIVIHPGSNSIKIGFPKDDHPVVV-PNCVAVPKKWLDLENSEHVENVCLQREQSEEFNNIKSEMEKNFRERMRYYKRK 118 (655)
T ss_dssp GGEEEEECCSSEEEEECTTSSSCEEE-ESCEEEEGGGSCCSSSCCCCTTCCCSCCCHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred CCeEEEcCCCcceeeeecCCCCCccc-ceeEEeccccccCCCccccCccccchhhhHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 46899999999999999999999966 9999864310 00
Q ss_pred -cc---------------------------CC--CCCCeeeCcchhh-ccCcceeeccccCCccc----C-------HHH
Q psy16631 48 -MA---------------------------GA--LEGDIFVGPKAEE-HRGLLSIHYPMEHGIIT----D-------WND 85 (376)
Q Consensus 48 -~~---------------------------~~--~~~~~~~g~~~~~-~~~~~~~~~p~~~g~i~----d-------~~~ 85 (376)
.+ .+ ...+++||++|.. .+..+.+++|+++|.|. | ||.
T Consensus 119 ~~pn~~e~~~~fN~~~~Pe~i~~~nDp~~~~W~~~~~d~~VGdEA~~~~r~~l~l~~PI~~GvI~~~s~Dy~s~q~~WD~ 198 (655)
T 4am6_A 119 VPGNAHEQVVSFNENSKPEIISEKNDPSPIEWIFDDSKLYYGSDALRCVDEKFVIRKPFRGGSFNVKSPYYKSLAELISD 198 (655)
T ss_dssp CSTTCCSSTTCCEEEECSCCCCSSSSCCSCCCBCCTTSCEEHHHHHTBCTTTEEEECSEETTEECTTCSSCSSHHHHHHH
T ss_pred CCCCCHHHHHHhcCCCCCeECCCCCCccccccccCCCCEEEehHHhhCCccCeEEeccccCCEecccCCccccccccHHH
Confidence 00 01 1247889999977 46778999999999998 8 999
Q ss_pred HHHHHHHhhcCccCCCCCC---CCcEEEEeCCCCChHhHHHHHHHhhcccCCCceecchhhhhhhhhcC-CceEEEEecC
Q psy16631 86 MERIWQYVYSNDQLQTFSE---EHPVLLTEAPLNPRRNREKAAEIFFESFNVPALYVSMQAVLSLYATG-RTTGVVLDSG 161 (376)
Q Consensus 86 ~~~~l~~~~~~~~l~~~~~---~~~vvl~~~~~~~~~~r~~~~~~lfe~~~~~~v~~~~~~~~a~~~~g-~~tglVVDiG 161 (376)
++.+|+|+|.+++|+++++ ++|++|++|+++++..|+++++++||.|++|+++++.++++|+|++| .++|||||+|
T Consensus 199 mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl~ttGLVVDiG 278 (655)
T 4am6_A 199 VTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVVNIG 278 (655)
T ss_dssp HHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCCSSCEEEEEEC
T ss_pred HHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCCCCceEEEcCC
Confidence 9999999997326999886 89999999999999999999999999999999999999999999999 6999999999
Q ss_pred CCceEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhcCC-----CCccchHHHHHHHHHHhccccc-CCccccccCC
Q psy16631 162 DGVTHAVPIYEGFAMPHSIMRNDIAGRDVTRYLKLLLRKEGV-----NFRTTAEFEIVRTIKEKACYLS-SNPVKEETTD 235 (376)
Q Consensus 162 ~~~t~i~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~-----~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~ 235 (376)
++.|+|+||++|+++.+++.++++||++++++|.++|..+++ ++....+.+++++||+++|||+ .+...
T Consensus 279 ~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t~~e~eiVrdIKEk~CyVs~~Di~~----- 353 (655)
T 4am6_A 279 AAETRIACVDEGTVLEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDADVAV----- 353 (655)
T ss_dssp SSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTSHHHHHHHHHHHHHHCCCCGGGCCS-----
T ss_pred CceEEEEEEeCCEEEhhheeeecchHHHHHHHHHHHHHHcCCCccccCCCCcchHHHHHHHHHheEEEcccchhh-----
Confidence 999999999999999999999999999999999999999986 4566678899999999999994 44311
Q ss_pred CCceEE--ECCCC----cEEEeccccccccccccCCCCCCC---------------------------------------
Q psy16631 236 SEKHTY--VLPDG----SSLDIGHARFRAPEVLFRPDLIGE--------------------------------------- 270 (376)
Q Consensus 236 ~~~~~~--~lpd~----~~i~v~~~r~~~~E~lF~p~~~~~--------------------------------------- 270 (376)
....| ..|++ ..+.++.|||.+||+||+|.+++.
T Consensus 354 -q~~~f~~r~P~~~~~ky~i~vgdErflaPe~lF~Pei~~~~~~~~~~~~~~~~~~~~s~d~y~~~~nd~~S~~q~~~~~ 432 (655)
T 4am6_A 354 -QLYNFMNRSPNQPTEKYEFKLFDEVMLAPLALFFPQIFKLIRTSSHKNSSLEFQLPESRDLFTNELNDWNSLSQFESKE 432 (655)
T ss_dssp -EEEEEEECCSSSCEEEEEEEESSHHHHHHHGGGSTHHHHHTSCCCCCCHHHHTTSCCCBCTTTCCBCSCCCHHHHHHHT
T ss_pred -hhhcceeccCCCCCcceEEEECCeehhCchhcCChhhcccccccccccchhhhhcCccccccCCCCCCccchhHHhhhc
Confidence 11122 23443 368899999999999999864210
Q ss_pred ----------------------------------------CCCCHHHHHHHHHHh-C-CHHHH--HHhhcCeEeccCccc
Q psy16631 271 ----------------------------------------ESEGIHDVLYYAIQK-S-DLDLR--KVLYQNIVLSGGSTL 306 (376)
Q Consensus 271 ----------------------------------------~~~~l~~~I~~~i~~-~-~~d~r--~~l~~nIvl~GG~s~ 306 (376)
...+|..+|.+||.. | ..|.+ +++++||+++||+|+
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pLdkAIi~SIt~a~~~~d~~k~~~~y~nilivGggsk 512 (655)
T 4am6_A 433 GNLYCDLNDDLKILNRILDAHNIIDQLQDKPENYGNTLKENFAPLEKAIVQSIANASITADVTRMNSFYSNILIVGGSSK 512 (655)
T ss_dssp TCCGGGCCSHHHHHHHHHHHHHHHHHHHTSSCSCSCSSCCCCCCHHHHHHHHHHHHHHTSCGGGHHHHHTCEEEESTTCC
T ss_pred cccCCCCccHhhhhhhhhcccccccccccCCcccccccccccccHHHHHHHHHHhhhccccHHHHHHHhhcEEEEcCccc
Confidence 014899999999983 3 22555 499999999999999
Q ss_pred ccCHHHHHHHHHHhhCCC--------------------------------------------------------------
Q psy16631 307 FKGFGDRLLAEIRKNAPK-------------------------------------------------------------- 324 (376)
Q Consensus 307 i~Gl~~rl~~eL~~~~~~-------------------------------------------------------------- 324 (376)
+|||...|...|....|.
T Consensus 513 i~g~~~~L~dri~i~rp~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 592 (655)
T 4am6_A 513 IPALDFILTDRINIWRPSLLSSASFPQFYKKLTKEIKDLEGHYVNAPDKTEDENKQILQAQIKEKIVEELEEQHQNIEHQ 592 (655)
T ss_dssp CTTHHHHHHHHHHHHSCSTTTBTTHHHHHHHHHHHHHHHHSTTCSCCSSSCCSSTTSTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred CccHHHHHHHHHHhhCcccccccccHHHHHHHHHhhhhhhhhhccccccccccchhhhhhhhhhhhhhhhhhhhhhhhhc
Confidence 999988887777653321
Q ss_pred -----CceEEEeCCCCC---ccchhhhHHHhhccccccccceeHHHHhhcCchhhhhccC
Q psy16631 325 -----DLKIRISAPQER---LYSTWIGGSILASLDTFKRMWVSKREFDEDGKRAIHRKTF 376 (376)
Q Consensus 325 -----~~~i~v~~~~~~---~~~~w~Gasi~a~l~~~~~~~itk~ey~e~G~~~~~~k~~ 376 (376)
..+|+|.+++.+ .+.+|+|||++|+|++|+++||||+||+|+|++++++||+
T Consensus 593 ~~~~~~~~i~V~~~p~~~d~~~~~W~GgSvla~l~~f~e~wIt~~Eyde~G~~il~~k~~ 652 (655)
T 4am6_A 593 NGNEHIFPVSIIPPPRDMNPALIIWKGASVLAQIKLVEELFITNSDWDVHGSRILQYKCI 652 (655)
T ss_dssp TSCCCBCCCCEECCCTTSCGGGHHHHHHHHHTTSHHHHHHCEEHHHHHHHGGGGGGTSCS
T ss_pred cccCCceeeEEeCCccccCcceeEEecceeeeecccHhheeecHHHHhhhcchheEeccc
Confidence 134788888755 8999999999999999999999999999999999999995
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=4.5e-36 Score=282.40 Aligned_cols=309 Identities=16% Similarity=0.199 Sum_probs=240.4
Q ss_pred CCcEEEeCCCcceEEEEcCCCCCCeeccccceecCccccccCCCCCCeeeCcchhhcc----CcceeeccccCCcccCHH
Q psy16631 9 NQPVVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHR----GLLSIHYPMEHGIITDWN 84 (376)
Q Consensus 9 ~~~vViD~Gs~~~k~G~a~~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~p~~~g~i~d~~ 84 (376)
..+|+||+||.++++|++++. |...+||+++...+ .+..+++|++|.... ....+.+|+++|.+.||+
T Consensus 3 ~~~igIDlGT~~s~v~~~~~~-~~~~~PS~v~~~~~-------~~~~~~vG~~A~~~~~~~~~~~~~~~p~~~g~i~~~~ 74 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRGKG-IVVNEPSVIAIDST-------TGEILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYT 74 (344)
T ss_dssp -CEEEEEECSSEEEEEETTTE-EEEEEESCEEEETT-------TCCEEEESHHHHTTTTCCCTTEEEECCEETTEESSHH
T ss_pred CceEEEEcCcCcEEEEECCCC-EEEeeCcEEEEecC-------CCcEEEEcHHHHHhcccCCCCeEEEecCCCCeeCChH
Confidence 368999999999999999876 77788999987543 123468999885432 344567999999999999
Q ss_pred HHHHHHHHhhcCccCCC-C-CCCCcEEEEeCCCCChHhHHHHHHHhhcccCCCceecchhhhhhhhhcCC-----ceEEE
Q psy16631 85 DMERIWQYVYSNDQLQT-F-SEEHPVLLTEAPLNPRRNREKAAEIFFESFNVPALYVSMQAVLSLYATGR-----TTGVV 157 (376)
Q Consensus 85 ~~~~~l~~~~~~~~l~~-~-~~~~~vvl~~~~~~~~~~r~~~~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~tglV 157 (376)
..+.+|.+++.+ +.. . ....++++++|+.++..+|+.+.+. ++.+|++.+.++++|.||+++++. .+.+|
T Consensus 75 ~~~~i~~~~l~~--~~~~~~~~~~~~vitvP~~~~~~~r~~~~~a-~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lV 151 (344)
T 1jce_A 75 VALVMLRYFINK--AKGGMNLFKPRVVIGVPIGITDVERRAILDA-GLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMV 151 (344)
T ss_dssp HHHHHHHHHHHH--HHTSCCSCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEE
T ss_pred HHHHHHHHHHHH--HhhccccCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEE
Confidence 999999999953 322 2 4468899999999999999988885 699999999999999999999986 68999
Q ss_pred EecCCCceEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHhcccccCCccccccCCCC
Q psy16631 158 LDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVTRYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETTDSE 237 (376)
Q Consensus 158 VDiG~~~t~i~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~~ 237 (376)
||+|+++|+++++..|.++.. ...++||+++++.|.+.+.++ +.+ ....+.+|++|++++....+...+
T Consensus 152 vDiGggttdvsv~~~~~~~~~--~~~~lGG~~id~~l~~~l~~~-~~~--~~~~~~ae~~K~~l~~~~~~~~~~------ 220 (344)
T 1jce_A 152 VDIGGGTTEVAVISLGSIVTW--ESIRIAGDEMDEAIVQYVRET-YRV--AIGERTAERVKIEIGNVFPSKEND------ 220 (344)
T ss_dssp EEECSSCEEEEEEETTEEEEE--EEESCSHHHHHHHHHHHHHHH-HCE--ECCHHHHHHHHHHHCBCSCCHHHH------
T ss_pred EEeCCCeEEEEEEEcCCEEee--CCCCccChhHHHHHHHHHHHH-hCc--ccCHHHHHHHHHHHhccCccccCC------
Confidence 999999999999999988753 578999999999999998765 111 124578999999998875432100
Q ss_pred ceEEE-----CCCCc--EEEeccccccccccccCCCCCCCCCCCHHHHHHHHHHhCCHHHHHHhh-cCeEeccCcccccC
Q psy16631 238 KHTYV-----LPDGS--SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLY-QNIVLSGGSTLFKG 309 (376)
Q Consensus 238 ~~~~~-----lpd~~--~i~v~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~~i~~~~~d~r~~l~-~nIvl~GG~s~i~G 309 (376)
...+. +.+|. .+.++.+++. .+|+|.+ ..+.+.|.+++.+++.+.++.++ ++|+|+||+|++||
T Consensus 221 ~~~~~~~~~~~~~g~~~~~~i~~~~~~---~~~~~~~-----~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~ 292 (344)
T 1jce_A 221 ELETTVSGIDLSTGLPRKLTLKGGEVR---EALRSVV-----VAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRG 292 (344)
T ss_dssp HCEEEEEEEETTTTEEEEEEEEHHHHH---HHTHHHH-----HHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBT
T ss_pred cceEEEeccccCCCCceeEEEeHHHHH---HHHHHHH-----HHHHHHHHHHHHhCCchhccchhhCcEEEECccccchH
Confidence 11222 23554 4555554432 3344321 35888999999999998888888 79999999999999
Q ss_pred HHHHHHHHHHhhCCCCceEEEeCCCCCccchhhhHHHhhc-cccccc
Q psy16631 310 FGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILAS-LDTFKR 355 (376)
Q Consensus 310 l~~rl~~eL~~~~~~~~~i~v~~~~~~~~~~w~Gasi~a~-l~~~~~ 355 (376)
+.++|++++.. + +..+.+|.+++|.||++++. +++|++
T Consensus 293 l~~~l~~~~~~------~--v~~~~~p~~ava~Gaa~~a~~~~~~~~ 331 (344)
T 1jce_A 293 LDTLLQKETGI------S--VIRSEEPLTAVAKGAGMVLDKVNILKK 331 (344)
T ss_dssp HHHHHHHHHSS------C--EEECSSTTTHHHHHHHHGGGCHHHHTT
T ss_pred HHHHHHHHHCC------C--ccccCChHHHHHHHHHHHHhChHHHHH
Confidence 99999999941 2 44466899999999999998 466643
No 9
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.91 E-value=2.3e-23 Score=189.17 Aligned_cols=244 Identities=18% Similarity=0.196 Sum_probs=178.1
Q ss_pred CCcEEEeCCCcceEEEEcCCCCCCeeccccceecCccccccCCCCCCeeeCcchhhccCcceeeccccCCcccCHHHHHH
Q psy16631 9 NQPVVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEHRGLLSIHYPMEHGIITDWNDMER 88 (376)
Q Consensus 9 ~~~vViD~Gs~~~k~G~a~~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~g~i~d~~~~~~ 88 (376)
+-.++||+||.++|+.+..+.. .. ++.. .....|+++|.+.||+..+.
T Consensus 28 ~~~~gIDiGS~s~k~vi~~~~~-~~-----l~~~--------------------------~~~~~~l~~g~i~d~~~~~~ 75 (272)
T 3h1q_A 28 PYKVGVDLGTADIVLVVTDQEG-IP-----VAGA--------------------------LKWASVVKDGLVVDYIGAIQ 75 (272)
T ss_dssp CCEEEEECCSSEEEEEEECTTC-CE-----EEEE--------------------------EEECCCCBTTBCTTHHHHHH
T ss_pred CEEEEEEcccceEEEEEECCCC-cE-----EEEE--------------------------eecccccCCCEEEcHHHHHH
Confidence 3478999999999998853321 11 1110 01246889999999999999
Q ss_pred HHHHhhcCccCCC-CCCCCcEEEEeCCCCChHhHHHHHHHhhcccCCCceecchhhhhhhhhcCCceEEEEecCCCceEE
Q psy16631 89 IWQYVYSNDQLQT-FSEEHPVLLTEAPLNPRRNREKAAEIFFESFNVPALYVSMQAVLSLYATGRTTGVVLDSGDGVTHA 167 (376)
Q Consensus 89 ~l~~~~~~~~l~~-~~~~~~vvl~~~~~~~~~~r~~~~~~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVDiG~~~t~i 167 (376)
+|++++.. .... ......++++.|..+....|+ .++.+++.+|++...+..++.|++++++..+++|||+|+++|.+
T Consensus 76 ~l~~~~~~-~~~~~~~~~~~~v~tvp~~~~~~~~~-~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~~~~viDiGggst~~ 153 (272)
T 3h1q_A 76 IVRELKAK-VERLLGSELFQAATAIPPGTVGRNAE-ACGHVVAGAGLELVTLVDEPVAAARALGINDGIVVDIGGGTTGI 153 (272)
T ss_dssp HHHHHHHH-HHHHSSSCCCEEEEECCSCC---CTT-HHHHHHHHTTCEEEEEECHHHHHHHHHTCSSEEEEEECSSCEEE
T ss_pred HHHHHHHH-HHHhcCCccCeEEEEcCCCCCHHHHH-HHHHHHHHcCCeeeecccHHHHHHHHHcCCCEEEEEECCCcEEE
Confidence 99998853 1111 222356777777766665555 56667899999999999999999999999999999999999999
Q ss_pred EEeeCCeeccccceeecccHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHhcccccCCccccccCCCCceEEECCCCc
Q psy16631 168 VPIYEGFAMPHSIMRNDIAGRDVTRYLKLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETTDSEKHTYVLPDGS 247 (376)
Q Consensus 168 ~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~~~~~~~lpd~~ 247 (376)
+++.+|.++.. ..+++||.++++.+.+.+.. +.+.++++|++++...
T Consensus 154 ~~~~~g~~~~~--~~~~~Gg~~~~~~l~~~l~~---------~~~~ae~~k~~~~~~~---------------------- 200 (272)
T 3h1q_A 154 AVIEKGKITAT--FDEPTGGTHLSLVLAGSYKI---------PFEEAETIKKDFSRHR---------------------- 200 (272)
T ss_dssp EEEETTEEEEE--CCBSCCHHHHHHHHHHHHTC---------CHHHHHHHHHSSTTHH----------------------
T ss_pred EEEECCEEEEE--ecCCCcHHHHHHHHHHHhCC---------CHHHHHHHHHhcCCHH----------------------
Confidence 99999998854 46899999999999988742 3477889998765110
Q ss_pred EEEeccccccccccccCCCCCCCCCCCHHHHHHHHHHhCCHHHHHHhhcCeEeccCcccccCHHHHHHHHHHhhCCCCce
Q psy16631 248 SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLFKGFGDRLLAEIRKNAPKDLK 327 (376)
Q Consensus 248 ~i~v~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~Gl~~rl~~eL~~~~~~~~~ 327 (376)
+...+.+.++ ..+.+.|.+.+.+++ ..++|+|+||+|++||+.++|+++|.
T Consensus 201 ------~~~~~~~~~~---------~~i~~~i~~~l~~~~------~~~~ivL~GG~a~~~~l~~~l~~~l~-------- 251 (272)
T 3h1q_A 201 ------EIMRVVRPVI---------EKMALIVKEVIKNYD------QTLPVYVVGGTAYLTGFSEEFSRFLG-------- 251 (272)
T ss_dssp ------HHHHHHHHHH---------HHHHHHHHHHTTTSC------SSCCEEEESGGGGSTTHHHHHHHHHS--------
T ss_pred ------HHHHHHHHHH---------HHHHHHHHHHHHhcC------CCCEEEEECCccchhhHHHHHHHHhC--------
Confidence 0000011111 235566666666665 13599999999999999999999993
Q ss_pred EEEeCCCCCccchhhhHHHhh
Q psy16631 328 IRISAPQERLYSTWIGGSILA 348 (376)
Q Consensus 328 i~v~~~~~~~~~~w~Gasi~a 348 (376)
.++..+.+|+++.|+||+++|
T Consensus 252 ~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 252 KEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp SCCBCCSSGGGHHHHHHHTTC
T ss_pred CCccccCChHHHHHHHHHhcC
Confidence 244556789999999999875
No 10
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.90 E-value=2.5e-24 Score=212.07 Aligned_cols=295 Identities=17% Similarity=0.195 Sum_probs=201.1
Q ss_pred CcEEEeCCCcceEEEEcCCCCCCee--------ccccceecCccccccCCCCCCeeeCcchhhcc--Cc---ceeec---
Q psy16631 10 QPVVIDNGSGVIKAGFAGDQVPKCC--------FPNYIGRPKHIRVMAGALEGDIFVGPKAEEHR--GL---LSIHY--- 73 (376)
Q Consensus 10 ~~vViD~Gs~~~k~G~a~~~~P~~~--------~ps~v~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~---~~~~~--- 73 (376)
.+|.||+||.+++++++.+..|..+ +||+++.. .+..++|++|.... .. ..+++
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~----------~~~~~vG~~A~~~~~~~p~~~~~~Kr~lg 72 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFK----------NGERLVGEVAKRQAITNPNTIISIKRHMG 72 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEES----------SSSEEESHHHHTTTTTCSSEEECGGGTTT
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEEC----------CCcEEECHHHHHhHHhCCCcHHHHHHhcC
Confidence 5899999999999999988777766 67776651 24578898874321 11 11122
Q ss_pred -ccc---CCcccCHHHHHHHHHHhhcCccCC------CCCCCCcEEEEeCCCCChHhHHHHHHHhhcccCCCceecchhh
Q psy16631 74 -PME---HGIITDWNDMERIWQYVYSNDQLQ------TFSEEHPVLLTEAPLNPRRNREKAAEIFFESFNVPALYVSMQA 143 (376)
Q Consensus 74 -p~~---~g~i~d~~~~~~~l~~~~~~~~l~------~~~~~~~vvl~~~~~~~~~~r~~~~~~lfe~~~~~~v~~~~~~ 143 (376)
|+. +|. +|. .++++.++|. +|. .......++++.|++++..+|+.+.+. ++.+|++.+.++++|
T Consensus 73 ~p~~~~~~g~--~~~-~~ei~a~~L~--~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a-~~~AGl~~~~li~Ep 146 (509)
T 2v7y_A 73 TDYKVEIEGK--QYT-PQEISAIILQ--YLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDA-GRIAGLEVERIINEP 146 (509)
T ss_dssp SCCCEEETTE--EEC-HHHHHHHHHH--HHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHH
T ss_pred CCcEEEECCE--EEc-HHHHHHHHHH--HHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEecCH
Confidence 555 664 332 3334444432 121 112346799999999999999988886 588999999999999
Q ss_pred hhhhhhcCC-----ceEEEEecCCCceEEEEee--CCee-ccccceeecccHHHHHHHHHHHHHhc-----CCCCccc--
Q psy16631 144 VLSLYATGR-----TTGVVLDSGDGVTHAVPIY--EGFA-MPHSIMRNDIAGRDVTRYLKLLLRKE-----GVNFRTT-- 208 (376)
Q Consensus 144 ~~a~~~~g~-----~tglVVDiG~~~t~i~pv~--dG~~-~~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~-- 208 (376)
.||++++|. .+.+|+|+|+++++++.+. +|.. +.......++||.++++.|.+++..+ +.++...
T Consensus 147 ~AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~ 226 (509)
T 2v7y_A 147 TAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKM 226 (509)
T ss_dssp HHHHHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCGGGCHH
T ss_pred HHHHHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCcccCHH
Confidence 999998876 4789999999999999876 4643 33333456899999999998887653 3343211
Q ss_pred ---hHHHHHHHHHHhcccccCCccccccCCCCceEEECC------CC---cEEEeccccccccccccCCCCCCCCCCCHH
Q psy16631 209 ---AEFEIVRTIKEKACYLSSNPVKEETTDSEKHTYVLP------DG---SSLDIGHARFRAPEVLFRPDLIGEESEGIH 276 (376)
Q Consensus 209 ---~~~~~~~~iK~~~~~~~~~~~~~~~~~~~~~~~~lp------d~---~~i~v~~~r~~~~E~lF~p~~~~~~~~~l~ 276 (376)
.-.+.+|.+|+.++.... ..+.+| +| ..+.++.+.+ |-+|.|.+ ..+.
T Consensus 227 ~~~~l~~~aE~~K~~ls~~~~------------~~i~l~~~~~~~~G~~~~~~~itr~~f---e~l~~~~~-----~~i~ 286 (509)
T 2v7y_A 227 ALQRLKDAAEKAKKELSGVTQ------------TQISLPFISANENGPLHLEMTLTRAKF---EELSAHLV-----ERTM 286 (509)
T ss_dssp HHHHHHHHHHHHHHHTTTCSE------------EEEEEEEEEEETTEEEEEEEEEEHHHH---HHHTHHHH-----HTTH
T ss_pred HHHHHHHHHHHHHHhcCCCCc------------EEEEEeccccCCCCCeeEEEEEEHHHH---HHHHHHHH-----HHHH
Confidence 124678899998875421 122222 23 2234444333 22333321 2466
Q ss_pred HHHHHHHHhCCHHHHHHhhcCeEeccCcccccCHHHHHHHHHHhhCCCCceEEEeCCCCCccchhhhHHHhhcc
Q psy16631 277 DVLYYAIQKSDLDLRKVLYQNIVLSGGSTLFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASL 350 (376)
Q Consensus 277 ~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~Gl~~rl~~eL~~~~~~~~~i~v~~~~~~~~~~w~Gasi~a~l 350 (376)
+.|.+++..+.. .....++|+|+||+|.+|++.++|++.+.. .+....+|..++|.||+++|..
T Consensus 287 ~~i~~~L~~a~~--~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~--------~~~~~~~p~~aVa~Gaa~~a~~ 350 (509)
T 2v7y_A 287 GPVRQALQDAGL--TPADIDKVILVGGSTRIPAVQEAIKRELGK--------EPHKGVNPDEVVAIGAAIQGGV 350 (509)
T ss_dssp HHHHHHHHHHTC--CGGGCSEEEEESGGGGCHHHHHHHHHHHSS--------CCBCCSCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCC--ChhHCcEEEEECCcccChHHHHHHHHHhCC--------CcCcCCCchhhhHhhHHHHHHH
Confidence 777788776642 334568999999999999999999999842 2445668899999999999864
No 11
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.90 E-value=5e-24 Score=203.10 Aligned_cols=305 Identities=15% Similarity=0.141 Sum_probs=195.7
Q ss_pred CcEEEeCCCcceEEEEcCCCCCCee--------ccccceecCccccccCCCCCCeeeCcchhhcc--Cccee--------
Q psy16631 10 QPVVIDNGSGVIKAGFAGDQVPKCC--------FPNYIGRPKHIRVMAGALEGDIFVGPKAEEHR--GLLSI-------- 71 (376)
Q Consensus 10 ~~vViD~Gs~~~k~G~a~~~~P~~~--------~ps~v~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~-------- 71 (376)
..|.||+||.++.+++..+..|..+ +||+++...+ ...++|++|.... ..-..
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~---------~~~~~G~~A~~~~~~~~~~~~~~~k~~l 73 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQD---------GETLVGQPAKRQAVTNPQNTLFAIKRLI 73 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTT---------SCEEESHHHHTTSTTCGGGEEECGGGTT
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECC---------CCEEECHHHHHhhhhCccceeehhHHhh
Confidence 5799999999999999865545433 4666655322 3445665542210 00000
Q ss_pred --------------ecccc-------------CCcccC-HHHHHHHHHHhhcC--ccCCCCCCCCcEEEEeCCCCChHhH
Q psy16631 72 --------------HYPME-------------HGIITD-WNDMERIWQYVYSN--DQLQTFSEEHPVLLTEAPLNPRRNR 121 (376)
Q Consensus 72 --------------~~p~~-------------~g~i~d-~~~~~~~l~~~~~~--~~l~~~~~~~~vvl~~~~~~~~~~r 121 (376)
.+|+. +|.... .+....+|+++... ..++ .....++++.|..++..+|
T Consensus 74 g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~i~~~~L~~l~~~a~~~~~--~~~~~~vitvP~~~~~~~r 151 (383)
T 1dkg_D 74 GRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLG--EPVTEAVITVPAYFNDAQR 151 (383)
T ss_dssp TCBSCSHHHHHHTTTCSSEEEECSSSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHS--SCCCEEEECBCTTCCHHHH
T ss_pred CCCCCcHHHHHHhhcCCeEEEEcCCCcEEEEECCEEEcHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHH
Confidence 02221 232222 23344455554321 1122 2345789999999999999
Q ss_pred HHHHHHhhcccCCCceecchhhhhhhhhcCCc------eEEEEecCCCceEEEEeeCC------eecc-ccceeecccHH
Q psy16631 122 EKAAEIFFESFNVPALYVSMQAVLSLYATGRT------TGVVLDSGDGVTHAVPIYEG------FAMP-HSIMRNDIAGR 188 (376)
Q Consensus 122 ~~~~~~lfe~~~~~~v~~~~~~~~a~~~~g~~------tglVVDiG~~~t~i~pv~dG------~~~~-~~~~~~~~GG~ 188 (376)
+.+.+. ++..|++.+.++++|.||+++++.. +.+|+|+|+++|+++.+..+ .... ......++||+
T Consensus 152 ~~~~~a-~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~ 230 (383)
T 1dkg_D 152 QATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGE 230 (383)
T ss_dssp HHHHHH-HHHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHH
T ss_pred HHHHHH-HHHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHH
Confidence 988876 5889999999999999999887653 68999999999999988643 3221 12335689999
Q ss_pred HHHHHHHHHHHhc-----CCCCccc-----hHHHHHHHHHHhcccccCCccccccCCCCceEEECCCC-c--EEEecccc
Q psy16631 189 DVTRYLKLLLRKE-----GVNFRTT-----AEFEIVRTIKEKACYLSSNPVKEETTDSEKHTYVLPDG-S--SLDIGHAR 255 (376)
Q Consensus 189 ~l~~~l~~~l~~~-----~~~~~~~-----~~~~~~~~iK~~~~~~~~~~~~~~~~~~~~~~~~lpd~-~--~i~v~~~r 255 (376)
++++.|.+++..+ +.++... .-.+.+|.+|++++...... -.....+..++| . .+.++.+.
T Consensus 231 ~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~------i~i~~~~~~~~G~~~~~~~it~~~ 304 (383)
T 1dkg_D 231 DFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTD------VNLPYITADATGPKHMNIKVTRAK 304 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEE------EEEEEEEEETTEEEEEEEEEEHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceE------EEEecccccCCCCeeEEEEEeHHH
Confidence 9999999888664 4443221 12467889999987642100 000111223344 2 23444443
Q ss_pred ccccccccCCCCCCCCCCCHHHHHHHHHHhCCHHHHHHhhcCeEeccCcccccCHHHHHHHHHHhhCCCCceEEEeCCCC
Q psy16631 256 FRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLFKGFGDRLLAEIRKNAPKDLKIRISAPQE 335 (376)
Q Consensus 256 ~~~~E~lF~p~~~~~~~~~l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~Gl~~rl~~eL~~~~~~~~~i~v~~~~~ 335 (376)
+. .+|+|.+ ..+.+.|.+++.++.. .....++|+|+||+|++||+.++|++++.. ++..+.+
T Consensus 305 ~~---~~~~~~~-----~~i~~~i~~~l~~~~~--~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~--------~v~~~~~ 366 (383)
T 1dkg_D 305 LE---SLVEDLV-----NRSIELLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGK--------EPRKDVN 366 (383)
T ss_dssp HH---HHSHHHH-----HHHHHHHHHHHHTTTC--CTTTCCEEEEESGGGGSHHHHHHHHHHHSS--------CCBCSSC
T ss_pred HH---HHHHHHH-----HHHHHHHHHHHHHcCC--CHhhCCEEEEecCccccHHHHHHHHHHhCC--------CCCCCcC
Confidence 32 2333321 2477788888887753 334468999999999999999999999942 3455678
Q ss_pred CccchhhhHHHhhcc
Q psy16631 336 RLYSTWIGGSILASL 350 (376)
Q Consensus 336 ~~~~~w~Gasi~a~l 350 (376)
|..++|.||+++|++
T Consensus 367 p~~ava~Gaa~~a~~ 381 (383)
T 1dkg_D 367 PDEAVAIGAAVQGGV 381 (383)
T ss_dssp TTTHHHHHHHHHTTT
T ss_pred hHHHHHHHHHHHHHh
Confidence 999999999999875
No 12
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.89 E-value=1.1e-22 Score=194.35 Aligned_cols=308 Identities=16% Similarity=0.102 Sum_probs=187.2
Q ss_pred CCcEEEeCCCcceEEEEcCCCCCCeeccccceecCccccccCCCCCCeeeCcchhhc--cCcceeeccccCCccc-----
Q psy16631 9 NQPVVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEH--RGLLSIHYPMEHGIIT----- 81 (376)
Q Consensus 9 ~~~vViD~Gs~~~k~G~a~~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~p~~~g~i~----- 81 (376)
+.+|.||+||.+++++++.+..|..+ ++..+.+..+.... ...+..++|++|... .......+.+++..-.
T Consensus 18 ~~viGID~GTt~s~va~~~~g~~~ii-~~~~g~~~~PS~v~-~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 95 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMKNGKTEIL-ANEQGNRITPSYVA-FTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDR 95 (394)
T ss_dssp CSCEEEEECSSEEEEEEECSSCEEEC-CCTTSCSSEECCEE-ECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCH
T ss_pred CCEEEEEeCcCcEEEEEEECCeeEEE-ECCCCCEeeceEEE-EeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcH
Confidence 45799999999999999987766644 33333322211100 012356778776321 1111222222221111
Q ss_pred ---------------------------------C-HHHHHHHHHHhhcC--ccCCCCCCCCcEEEEeCCCCChHhHHHHH
Q psy16631 82 ---------------------------------D-WNDMERIWQYVYSN--DQLQTFSEEHPVLLTEAPLNPRRNREKAA 125 (376)
Q Consensus 82 ---------------------------------d-~~~~~~~l~~~~~~--~~l~~~~~~~~vvl~~~~~~~~~~r~~~~ 125 (376)
. -+....+++++... .+++ ..-..++++.|+.++..+|+.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~--~~~~~~vitvP~~~~~~~r~~~~ 173 (394)
T 3qfu_A 96 SVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLG--TKVTHAVVTVPAYFNDAQRQATK 173 (394)
T ss_dssp HHHHHHTTCSSEEEEETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCCHHHHHHHH
T ss_pred HHHHHhhcCCeEEEcCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcC--CCcceEEEEECCCCCHHHHHHHH
Confidence 1 12233334333211 1122 23467999999999999999877
Q ss_pred HHhhcccCCCceecchhhhhhhhhcCCc------eEEEEecCCCceEEEEee--CCeecc-ccceeecccHHHHHHHHHH
Q psy16631 126 EIFFESFNVPALYVSMQAVLSLYATGRT------TGVVLDSGDGVTHAVPIY--EGFAMP-HSIMRNDIAGRDVTRYLKL 196 (376)
Q Consensus 126 ~~lfe~~~~~~v~~~~~~~~a~~~~g~~------tglVVDiG~~~t~i~pv~--dG~~~~-~~~~~~~~GG~~l~~~l~~ 196 (376)
+.+ +..|++.+.++++|.||+++++.. +.+|+|+|+++|+++.+. ++.... ......++||.++++.|.+
T Consensus 174 ~a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~ 252 (394)
T 3qfu_A 174 DAG-TIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVR 252 (394)
T ss_dssp HHH-HHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHH-HHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHH
Confidence 776 889999999999999999988653 449999999999888774 443322 2233478999999999988
Q ss_pred HHHhc-----CCCCccc-----hHHHHHHHHHHhcccccCCccccccCCCCceEEEC---CCCcE--EEecccccccccc
Q psy16631 197 LLRKE-----GVNFRTT-----AEFEIVRTIKEKACYLSSNPVKEETTDSEKHTYVL---PDGSS--LDIGHARFRAPEV 261 (376)
Q Consensus 197 ~l~~~-----~~~~~~~-----~~~~~~~~iK~~~~~~~~~~~~~~~~~~~~~~~~l---pd~~~--i~v~~~r~~~~E~ 261 (376)
.+..+ +.++... .-.+.+|.+|+.+.... ...+.+ .++.. +.++.+.+ |-
T Consensus 253 ~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~------------~~~~~~~~~~~~~~~~~~i~r~~~---~~ 317 (394)
T 3qfu_A 253 QLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQM------------STRIEIDSFVDGIDLSETLTRAKF---EE 317 (394)
T ss_dssp HHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCS------------EEEEEEEEEETTEEEEEEEEHHHH---HH
T ss_pred HHHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCC------------cEEEEEEeccCCceeEEEEEHHHH---HH
Confidence 87532 2222111 11246677777654321 111221 13322 23333222 12
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHhCCHHHHHHhhcCeEeccCcccccCHHHHHHHHHHhhCCCCceEEEeCCCCCccchh
Q psy16631 262 LFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTW 341 (376)
Q Consensus 262 lF~p~~~~~~~~~l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~Gl~~rl~~eL~~~~~~~~~i~v~~~~~~~~~~w 341 (376)
++.|.+ ..+.+.|.++|..+..+ ....++|+|+||+|++|++.++|++.+.. .++..+.+|..++|
T Consensus 318 ~~~~~~-----~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l~~~~~~-------~~v~~~~~p~~ava 383 (394)
T 3qfu_A 318 LNLDLF-----KKTLKPVEKVLQDSGLE--KKDVDDIVLVGGSTRIPKVQQLLESYFDG-------KKASKGINPDEAVA 383 (394)
T ss_dssp HHHHHH-----HHTHHHHHHHHHHHTCC--GGGCCEEEEESGGGGSHHHHHHHHHHTTT-------CCCBCCSCTTTHHH
T ss_pred HHHHHH-----HHHHHHHHHHHHHcCCC--HHHCCEEEEECCccccHHHHHHHHHHcCC-------CCCCCCcCHHHHHH
Confidence 222210 23556666777655432 34568999999999999999999998831 23556668999999
Q ss_pred hhHHHhhcc
Q psy16631 342 IGGSILASL 350 (376)
Q Consensus 342 ~Gasi~a~l 350 (376)
.||+++|.+
T Consensus 384 ~Gaa~~a~~ 392 (394)
T 3qfu_A 384 YGAAVQAGV 392 (394)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999864
No 13
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.85 E-value=2.1e-21 Score=186.26 Aligned_cols=309 Identities=16% Similarity=0.132 Sum_probs=186.8
Q ss_pred CCCcEEEeCCCcceEEEEcCCCCCCeeccccceecCccccccCCCCCCeeeCcchhhc--cCcceeeccccCCcccC---
Q psy16631 8 VNQPVVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVMAGALEGDIFVGPKAEEH--RGLLSIHYPMEHGIITD--- 82 (376)
Q Consensus 8 ~~~~vViD~Gs~~~k~G~a~~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~p~~~g~i~d--- 82 (376)
...+|.||+||.+++++++.+..|..+ ++..+.+..+.... ...+..++|++|... .......+.+++..-.+
T Consensus 22 ~~~viGID~GTt~s~va~~~~g~~~ii-~~~~g~~~~PS~v~-~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~ 99 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQHGKVEII-ANDQGNRTTPSYVA-FTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFED 99 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEETTEEEEC-CCTTSCSSEECCEE-ECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTS
T ss_pred cCCEEEEEcCCccEEEEEEECCeeEEE-ECCCCCcccceEEE-ECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCc
Confidence 446899999999999999876655533 44433332221111 112356778776331 11222222222222111
Q ss_pred ------------------------------------HHHHHHHHHHhhcC--ccCCCCCCCCcEEEEeCCCCChHhHHHH
Q psy16631 83 ------------------------------------WNDMERIWQYVYSN--DQLQTFSEEHPVLLTEAPLNPRRNREKA 124 (376)
Q Consensus 83 ------------------------------------~~~~~~~l~~~~~~--~~l~~~~~~~~vvl~~~~~~~~~~r~~~ 124 (376)
.+....+++++... ..++ ..-..++++.|+.++..+|+.+
T Consensus 100 ~~~~~~~~~~p~~~~~~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~--~~~~~~vitvPa~~~~~~r~~~ 177 (404)
T 3i33_A 100 ATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLG--GKVHSAVITVPAYFNDSQRQAT 177 (404)
T ss_dssp HHHHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHS--SCCCEEEEEECTTCCHHHHHHH
T ss_pred HHHHHHHhhCCceEEccCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhc--cCCCcEEEEECCCCCHHHHHHH
Confidence 12233334333211 1122 1245799999999999999887
Q ss_pred HHHhhcccCCCceecchhhhhhhhhcCCc---------eEEEEecCCCceEEEEee--CCee-ccccceeecccHHHHHH
Q psy16631 125 AEIFFESFNVPALYVSMQAVLSLYATGRT---------TGVVLDSGDGVTHAVPIY--EGFA-MPHSIMRNDIAGRDVTR 192 (376)
Q Consensus 125 ~~~lfe~~~~~~v~~~~~~~~a~~~~g~~---------tglVVDiG~~~t~i~pv~--dG~~-~~~~~~~~~~GG~~l~~ 192 (376)
.+. ++..|++.+.++++|.||+++++.. +.+|+|+|+++|+++.+. +|.. +.......++||.++++
T Consensus 178 ~~a-~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~ 256 (404)
T 3i33_A 178 KDA-GTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDN 256 (404)
T ss_dssp HHH-HHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHH
T ss_pred HHH-HHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHH
Confidence 776 6889999999999999999987643 459999999999998874 4433 22233457899999999
Q ss_pred HHHHHHHhc-----CCCCccc-----hHHHHHHHHHHhcccccCCccccccCCCCceEEEC---CCCcE--EEecccccc
Q psy16631 193 YLKLLLRKE-----GVNFRTT-----AEFEIVRTIKEKACYLSSNPVKEETTDSEKHTYVL---PDGSS--LDIGHARFR 257 (376)
Q Consensus 193 ~l~~~l~~~-----~~~~~~~-----~~~~~~~~iK~~~~~~~~~~~~~~~~~~~~~~~~l---pd~~~--i~v~~~r~~ 257 (376)
.+.+.+..+ +.++... .-...+|.+|+.++... ...+.+ .+|.. +.++.+.+
T Consensus 257 ~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~------------~~~~~~~~~~~g~~~~~~i~r~~~- 323 (404)
T 3i33_A 257 RMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSST------------QASIEIDSLYEGVDFYTSITRARF- 323 (404)
T ss_dssp HHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSS------------EEEEEEEEEETTEEEEEEEEHHHH-
T ss_pred HHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCc------------ceEEEEeeccCCceeEEEEcHHHH-
Confidence 998887432 2222111 01256777887764321 111111 13332 33333222
Q ss_pred ccccccCCCCCCCCCCCHHHHHHHHHHhCCHHHHHHhhcCeEeccCcccccCHHHHHHHHHHhhCCCCceEEEeCCCCCc
Q psy16631 258 APEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLFKGFGDRLLAEIRKNAPKDLKIRISAPQERL 337 (376)
Q Consensus 258 ~~E~lF~p~~~~~~~~~l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~Gl~~rl~~eL~~~~~~~~~i~v~~~~~~~ 337 (376)
|-++.|.+ ..+.+.|.+.+..+.. .....++|+|+||+|++|++.++|++.+.. .++..+.+|.
T Consensus 324 --~~~~~~~~-----~~i~~~i~~~l~~~~~--~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~-------~~v~~~~~p~ 387 (404)
T 3i33_A 324 --EELNADLF-----RGTLEPVEKALRDAKL--DKGQIQEIVLVGGSTRIPKIQKLLQDFFNG-------KELNKSINPD 387 (404)
T ss_dssp --HHHTHHHH-----HHTHHHHHHHHHHHTC--CGGGCCEEEEESGGGGCHHHHHHHHHHTTT-------CCCBCSSCTT
T ss_pred --HHHHHHHH-----HHHHHHHHHHHHHcCC--CHhhCCEEEEECCccccHHHHHHHHHHcCC-------CCCCCCcCHH
Confidence 12222210 2345566666665422 223457899999999999999999988732 2355667899
Q ss_pred cchhhhHHHhhcc
Q psy16631 338 YSTWIGGSILASL 350 (376)
Q Consensus 338 ~~~w~Gasi~a~l 350 (376)
.+++.||+++|.+
T Consensus 388 ~ava~Gaa~~a~~ 400 (404)
T 3i33_A 388 EAVAYGAAVQAAI 400 (404)
T ss_dssp THHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999865
No 14
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.80 E-value=6.4e-19 Score=175.03 Aligned_cols=214 Identities=16% Similarity=0.152 Sum_probs=145.4
Q ss_pred CcEEEEeCCCCChHhHHHHHHHhhcccCCCceecchhhhhhhhhcCC-------ceEEEEecCCCceEEEEee--CCee-
Q psy16631 106 HPVLLTEAPLNPRRNREKAAEIFFESFNVPALYVSMQAVLSLYATGR-------TTGVVLDSGDGVTHAVPIY--EGFA- 175 (376)
Q Consensus 106 ~~vvl~~~~~~~~~~r~~~~~~lfe~~~~~~v~~~~~~~~a~~~~g~-------~tglVVDiG~~~t~i~pv~--dG~~- 175 (376)
..++++.|+.++..+|+.+.+. ++..|++.+.++++|.||+++++. .+.+|+|+|+++++|+.+. +|..
T Consensus 140 ~~~VitVPa~f~~~qr~a~~~A-~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~ 218 (554)
T 1yuw_A 140 TNAVVTVPAYFNDSQRQATKDA-GTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFE 218 (554)
T ss_dssp CEEEEEECTTCCHHHHHHHHHH-HHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEE
Confidence 5789999999999999887774 588999999999999999988763 4689999999999999886 6764
Q ss_pred ccccceeecccHHHHHHHHHHHHHh-----cCCCCccc-----hHHHHHHHHHHhcccccCCccccccCCCCceEEECC-
Q psy16631 176 MPHSIMRNDIAGRDVTRYLKLLLRK-----EGVNFRTT-----AEFEIVRTIKEKACYLSSNPVKEETTDSEKHTYVLP- 244 (376)
Q Consensus 176 ~~~~~~~~~~GG~~l~~~l~~~l~~-----~~~~~~~~-----~~~~~~~~iK~~~~~~~~~~~~~~~~~~~~~~~~lp- 244 (376)
+........+||+++++.|.+++.. .+.++... .-.+.+|.+|+.++... ...+.++
T Consensus 219 v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~------------~~~i~i~~ 286 (554)
T 1yuw_A 219 VKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSST------------QASIEIDS 286 (554)
T ss_dssp EEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSS------------EEEEEETT
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCc------------eEEEEEee
Confidence 2333445689999999999887753 23333211 12366788888876432 1122322
Q ss_pred --CCc--EEEeccccccccccccCCCCCCCCCCCHHHHHHHHHHhCCHHHHHHhhcCeEeccCcccccCHHHHHHHHHHh
Q psy16631 245 --DGS--SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLFKGFGDRLLAEIRK 320 (376)
Q Consensus 245 --d~~--~i~v~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~Gl~~rl~~eL~~ 320 (376)
+|. .+.++.+.+ |-++.|.+ ..+.+.|.+++..+.. ...-.+.|+|+||+|.+|++.++|++.+..
T Consensus 287 ~~~g~~~~~~ltr~~~---e~l~~~~~-----~~i~~~i~~~L~~a~~--~~~~i~~VvLvGG~srip~v~~~l~~~f~~ 356 (554)
T 1yuw_A 287 LYEGIDFYTSITRARF---EELNADLF-----RGTLDPVEKALRDAKL--DKSQIHDIVLVGGSTRIPKIQKLLQDFFNG 356 (554)
T ss_dssp CSSSCCEEEEEEHHHH---HHHTHHHH-----HHTTHHHHHHHHHTTC--CGGGCCEEEEESGGGGCHHHHHHHHHHTTT
T ss_pred ccCCceEEEEEEHHHH---HHHHHHHH-----HHHHHHHHHHHHHcCC--ChhhCcEEEEECCcccChHHHHHHHHHcCC
Confidence 232 223333221 11222100 1233455666655421 123457899999999999999999988742
Q ss_pred hCCCCceEEEeCCCCCccchhhhHHHhhc
Q psy16631 321 NAPKDLKIRISAPQERLYSTWIGGSILAS 349 (376)
Q Consensus 321 ~~~~~~~i~v~~~~~~~~~~w~Gasi~a~ 349 (376)
.++..+.+|..+++.||+++|.
T Consensus 357 -------~~v~~~~np~~aVA~Gaa~~a~ 378 (554)
T 1yuw_A 357 -------KELNKSINPDEAVAYGAAVQAA 378 (554)
T ss_dssp -------CCCBCCSCTTTHHHHHHHHHHH
T ss_pred -------CccccCCCchhHHHHHHHHHHH
Confidence 1344566889999999999986
No 15
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.78 E-value=1.5e-18 Score=174.01 Aligned_cols=215 Identities=17% Similarity=0.159 Sum_probs=148.8
Q ss_pred CCcEEEEeCCCCChHhHHHHHHHhhcccCCCceecchhhhhhhhhcCC------ceEEEEecCCCceEEEEee------C
Q psy16631 105 EHPVLLTEAPLNPRRNREKAAEIFFESFNVPALYVSMQAVLSLYATGR------TTGVVLDSGDGVTHAVPIY------E 172 (376)
Q Consensus 105 ~~~vvl~~~~~~~~~~r~~~~~~lfe~~~~~~v~~~~~~~~a~~~~g~------~tglVVDiG~~~t~i~pv~------d 172 (376)
-..++++.|.+++..+|+.+.+.+ +..|++.+.++++|.||++++|. .+.+|+|+|+++++|+.+. +
T Consensus 135 v~~~VitVPa~f~d~qr~a~~~A~-~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~ 213 (605)
T 2kho_A 135 VTEAVITVPAYFNDAQRQATKDAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGE 213 (605)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHH-HTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTS
T ss_pred CcEEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCC
Confidence 357899999999999998877764 77899999999999999988764 3479999999999999886 4
Q ss_pred Cee-ccccceeecccHHHHHHHHHHHHHhc-----CCCCccc-----hHHHHHHHHHHhcccccCCccccccCCCCceEE
Q psy16631 173 GFA-MPHSIMRNDIAGRDVTRYLKLLLRKE-----GVNFRTT-----AEFEIVRTIKEKACYLSSNPVKEETTDSEKHTY 241 (376)
Q Consensus 173 G~~-~~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~-----~~~~~~~~iK~~~~~~~~~~~~~~~~~~~~~~~ 241 (376)
|.. +.......++||.++++.|.+++..+ +.++... .-.+.+|.+|+.++.... ..+
T Consensus 214 g~~~v~a~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~------------~~i 281 (605)
T 2kho_A 214 KTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQ------------TDV 281 (605)
T ss_dssp CEEEEEEEEEESSCSGGGTHHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSE------------EEE
T ss_pred CeEEEEEECCCCCccHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCc------------eEE
Confidence 543 22223356899999999998877653 3333221 123677888888764321 112
Q ss_pred ECC------CC-c--EEEeccccccccccccCCCCCCCCCCCHHHHHHHHHHhCCHHHHHHhhcCeEeccCcccccCHHH
Q psy16631 242 VLP------DG-S--SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLFKGFGD 312 (376)
Q Consensus 242 ~lp------d~-~--~i~v~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~Gl~~ 312 (376)
.+| +| . .+.++.+.+ |-++.|.+ ..+.+.|.+++..+.. ...-.+.|+|+||+|.+|++.+
T Consensus 282 ~l~~~~~~~~G~~~~~~~itr~~f---e~l~~~~~-----~~i~~~i~~~L~~a~~--~~~~i~~VvLvGG~srip~v~~ 351 (605)
T 2kho_A 282 NLPYITADATGPKHMNIKVTRAKL---ESLVEDLV-----NRSIEPLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQK 351 (605)
T ss_dssp EEEEEEEETTEEEEEEEEEEHHHH---HTTCCSTT-----GGGTSHHHHHHHTTTC--CTTTCSEEEEESGGGGSHHHHH
T ss_pred EecccccCCCCceEEEEEEeHHHH---HHHHHHHH-----HHHHHHHHHHHHHcCC--ChhhCceEEEECCcccChHHHH
Confidence 221 22 1 223433322 23333321 3466677888877642 2233578999999999999999
Q ss_pred HHHHHHHhhCCCCceEEEeCCCCCccchhhhHHHhhcc
Q psy16631 313 RLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASL 350 (376)
Q Consensus 313 rl~~eL~~~~~~~~~i~v~~~~~~~~~~w~Gasi~a~l 350 (376)
+|++.+.. .+....+|..+++.||+++|..
T Consensus 352 ~l~~~fg~--------~~~~~~npd~aVA~GAa~~a~~ 381 (605)
T 2kho_A 352 KVAEFFGK--------EPRKDVNPDEAVAIGAAVQGGV 381 (605)
T ss_dssp HHHHHHSS--------CCBCSSCTTTHHHHHHHHHHTT
T ss_pred HHHHhcCC--------CcCcCCCcchHHHHHHHHHHHH
Confidence 99988832 2345567889999999999864
No 16
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.77 E-value=1.1e-18 Score=167.68 Aligned_cols=220 Identities=15% Similarity=0.166 Sum_probs=143.5
Q ss_pred CCCcEEEEeCCCCChHhHHHHHHHhhcccCCCceecchhhhhhhhhcCCc--------eEEEEecCCCceEEEEe--eCC
Q psy16631 104 EEHPVLLTEAPLNPRRNREKAAEIFFESFNVPALYVSMQAVLSLYATGRT--------TGVVLDSGDGVTHAVPI--YEG 173 (376)
Q Consensus 104 ~~~~vvl~~~~~~~~~~r~~~~~~lfe~~~~~~v~~~~~~~~a~~~~g~~--------tglVVDiG~~~t~i~pv--~dG 173 (376)
....++++.|..++...|+.+.+.+ +..|+..+.++.+|.||+++++.. +.+|+|+|+++|+++.+ .+|
T Consensus 149 ~~~~~vitvPa~~~~~~r~~~~~a~-~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~ 227 (409)
T 4gni_A 149 KVTSAVITIPTNFTEKQKAALIAAA-AAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSG 227 (409)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETT
T ss_pred CCCeEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCC
Confidence 3467999999999999988766664 778999999999999999988764 57999999999999885 344
Q ss_pred eec-cccceeecccHHHHHHHHHHHHHhc-----C--CCCccc-----hHHHHHHHHHHhcccccCCccccccCCCCceE
Q psy16631 174 FAM-PHSIMRNDIAGRDVTRYLKLLLRKE-----G--VNFRTT-----AEFEIVRTIKEKACYLSSNPVKEETTDSEKHT 240 (376)
Q Consensus 174 ~~~-~~~~~~~~~GG~~l~~~l~~~l~~~-----~--~~~~~~-----~~~~~~~~iK~~~~~~~~~~~~~~~~~~~~~~ 240 (376)
..- .......++||.++++.|.+.+..+ + .+.... .-...+|.+|+.+.... ...
T Consensus 228 ~~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~------------~~~ 295 (409)
T 4gni_A 228 MYTILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRST------------NAS 295 (409)
T ss_dssp EEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSS------------EEE
T ss_pred eEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCC------------ceE
Confidence 322 2222347899999999998887653 1 111100 01236677887764321 111
Q ss_pred EEC---CCCcE--EEeccccccccccccCCCCCCCCCCCHHHHHHHHHHhCCHHHHHHhhcCeEeccCcccccCHHHHHH
Q psy16631 241 YVL---PDGSS--LDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLFKGFGDRLL 315 (376)
Q Consensus 241 ~~l---pd~~~--i~v~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~Gl~~rl~ 315 (376)
+.+ .++.. +.++.+.+ |-++.|.+ ..+.+.|.+.+..... .....+.|+|+||+|.+|++.++|+
T Consensus 296 i~i~~~~~~~~~~~~itr~~~---~~~~~~~~-----~~i~~~i~~~l~~~~~--~~~~i~~V~LvGG~s~~p~v~~~l~ 365 (409)
T 4gni_A 296 FSVESLIDGLDFASTINRLRY---ETIARTVF-----EGFNRLVESAVKKAGL--DPLDVDEVIMSGGTSNTPRIAANFR 365 (409)
T ss_dssp EEEEEEETTEEEEEEEEHHHH---HHHTHHHH-----HHHHHHHHHHHHHTTC--CGGGCCEEEEESGGGGCHHHHHHHH
T ss_pred EEeecccCCcceEEEeeHHHH---HHHHHHHH-----HHHHHHHHHHHHHcCC--CHHHCCEEEEECCccccHHHHHHHH
Confidence 111 12322 23332211 12222210 2355566666665422 2234578999999999999999999
Q ss_pred HHHHhhCCCCceEEE------eCCCCCccchhhhHHHhhcccc
Q psy16631 316 AEIRKNAPKDLKIRI------SAPQERLYSTWIGGSILASLDT 352 (376)
Q Consensus 316 ~eL~~~~~~~~~i~v------~~~~~~~~~~w~Gasi~a~l~~ 352 (376)
+.+.. .++| ....+|..++-.||++++....
T Consensus 366 ~~f~~------~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~ 402 (409)
T 4gni_A 366 YIFPE------STRILAPSTDPSALNPSELQARGAALQASLIQ 402 (409)
T ss_dssp HHSCT------TSEEESTTTCTTCCCTTTHHHHHHHHHHHHHH
T ss_pred HHcCC------ccccccccccCCCcCHHHHHHHHHHHHhhhhh
Confidence 88732 3355 3456889999999999997653
No 17
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=99.73 E-value=5.2e-17 Score=164.22 Aligned_cols=213 Identities=11% Similarity=0.147 Sum_probs=145.3
Q ss_pred CcEEEEeCCCCChHhHHHHHHHhhcccCCCceecchhhhhhhhhcCC------------ceEEEEecCCCceEEEEee--
Q psy16631 106 HPVLLTEAPLNPRRNREKAAEIFFESFNVPALYVSMQAVLSLYATGR------------TTGVVLDSGDGVTHAVPIY-- 171 (376)
Q Consensus 106 ~~vvl~~~~~~~~~~r~~~~~~lfe~~~~~~v~~~~~~~~a~~~~g~------------~tglVVDiG~~~t~i~pv~-- 171 (376)
..++++.|++++..+|+.+.+.+ +..|++.+.++++|.||++++|. .+.+|+|+|+++++|+.+.
T Consensus 139 ~~~VITVPa~f~~~qR~a~~~Aa-~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~ 217 (675)
T 3d2f_A 139 TDVCIAVPPWYTEEQRYNIADAA-RIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFK 217 (675)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEE
T ss_pred ceEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEec
Confidence 57899999999999999877754 77999999999999999887642 4579999999999999885
Q ss_pred CCee-ccccceeecccHHHHHHHHHHHHHh-----cCCCCccch-----HHHHHHHHHHhcccccCCccccccCCCCceE
Q psy16631 172 EGFA-MPHSIMRNDIAGRDVTRYLKLLLRK-----EGVNFRTTA-----EFEIVRTIKEKACYLSSNPVKEETTDSEKHT 240 (376)
Q Consensus 172 dG~~-~~~~~~~~~~GG~~l~~~l~~~l~~-----~~~~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~~~~~~ 240 (376)
+|.. +........+||+++++.|.+++.. .+.++.... -...+|.+|+.++... ...
T Consensus 218 ~g~~~V~a~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~------------~~~ 285 (675)
T 3d2f_A 218 KGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANT------------NAP 285 (675)
T ss_dssp TTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCS------------EEE
T ss_pred CCeEEEEEEcCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCC------------ceE
Confidence 7765 3333345789999999999888853 233322110 1367788888876421 112
Q ss_pred EECC---CCc--EEEeccccc-cccccccCCCCCCCCCCCHHHHHHHHHHhCCHHHHHHhhcCeEeccCcccccCHHHHH
Q psy16631 241 YVLP---DGS--SLDIGHARF-RAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLFKGFGDRL 314 (376)
Q Consensus 241 ~~lp---d~~--~i~v~~~r~-~~~E~lF~p~~~~~~~~~l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~Gl~~rl 314 (376)
+.++ +|. .+.++.+.+ .+.+.++ ..+.+.|.+++..... ...-...|+|+||+|.+|++.++|
T Consensus 286 i~i~~~~~g~~~~~~itr~~fe~l~~~l~---------~~i~~~i~~~L~~a~l--~~~~I~~VvLvGGssriP~v~~~l 354 (675)
T 3d2f_A 286 FSVESVMNDVDVSSQLSREELEELVKPLL---------ERVTEPVTKALAQAKL--SAEEVDFVEIIGGTTRIPTLKQSI 354 (675)
T ss_dssp EEETTSSSSCCEEEEEEHHHHHHHTHHHH---------TTTTHHHHHHHHHHTC--CGGGCCEEEEESGGGGSHHHHHHH
T ss_pred EEEeeeccCceEEEEEeHHHHHHHHHHHH---------HHHHHHHHHHHHHhCC--ChhhCcEEEEECCCccChHHHHHH
Confidence 2222 122 333433322 1122222 2345566666654421 112247899999999999999999
Q ss_pred HHHHHhhCCCCceEEEeCCCCCccchhhhHHHhhcc
Q psy16631 315 LAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASL 350 (376)
Q Consensus 315 ~~eL~~~~~~~~~i~v~~~~~~~~~~w~Gasi~a~l 350 (376)
++.+.. .+....+|..+++.||+++|..
T Consensus 355 ~~~fg~--------~~~~~~nPdeaVA~GAa~~a~~ 382 (675)
T 3d2f_A 355 SEAFGK--------PLSTTLNQDEAIAKGAAFICAI 382 (675)
T ss_dssp HHHHTS--------CEECCSCTTTHHHHHHHHHHHH
T ss_pred HHhcCC--------CccccCCcchHHHHHHHHHHHH
Confidence 988831 2445668899999999998863
No 18
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.71 E-value=8.9e-17 Score=152.55 Aligned_cols=168 Identities=14% Similarity=0.138 Sum_probs=106.5
Q ss_pred HHhhcccCCCceecchhhhhhhhhcC-------CceEEEEecCCCceEEEEeeCCeeccccceeecccHHHHHHHHHHHH
Q psy16631 126 EIFFESFNVPALYVSMQAVLSLYATG-------RTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVTRYLKLLL 198 (376)
Q Consensus 126 ~~lfe~~~~~~v~~~~~~~~a~~~~g-------~~tglVVDiG~~~t~i~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l 198 (376)
.-+++..|++...+..+|.|++++++ ....+|||+|+++|+++.+.+|.++.. ..+++||.++++.+.+.+
T Consensus 157 ~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~~~--~~~~~GG~~i~~~i~~~~ 234 (377)
T 2ych_A 157 LEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLAV--RVLTLSGKDFTEAIARSF 234 (377)
T ss_dssp HHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEEEE--EEESCSHHHHHHHHHHHT
T ss_pred HHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEEEE--EeeechHHHHHHHHHHHh
Confidence 33458899999999999999988763 234699999999999999999998754 568999999999988743
Q ss_pred HhcCCCCccchHHHHHHHHHHhcccccCCccccccCCCCceEEECCCCcEEEeccccccccccccCCCCCCCCCCCHHHH
Q psy16631 199 RKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETTDSEKHTYVLPDGSSLDIGHARFRAPEVLFRPDLIGEESEGIHDV 278 (376)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~~~~~~~lpd~~~i~v~~~r~~~~E~lF~p~~~~~~~~~l~~~ 278 (376)
. .+.+.+|.+|.++++...+..+ ....+.+++ ..+.++.+. ..|++ .|. ...+.+.
T Consensus 235 ~---------~~~~~aE~~K~~~~~~~~~~~~------~~~~i~~~~-~~~~i~~~~--~~~~i-~~~-----~~~i~~~ 290 (377)
T 2ych_A 235 N---------LDLLAAEEVKRTYGMATLPTED------EELLLDFDA-ERERYSPGR--IYDAI-RPV-----LVELTQE 290 (377)
T ss_dssp T---------CCHHHHHHHHHHTC--------------------------------C--HHHHH-HHH-----HHHHHHH
T ss_pred C---------CCHHHHHHHHhhcccccccccc------ccccccccc-ccccCCHHH--HHHHH-HHH-----HHHHHHH
Confidence 1 1357899999998876532111 011122222 122222211 11111 110 0235566
Q ss_pred HHHHHHhCCHHHHHHhhcCeEeccCcccccCHHHHHHHHHH
Q psy16631 279 LYYAIQKSDLDLRKVLYQNIVLSGGSTLFKGFGDRLLAEIR 319 (376)
Q Consensus 279 I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~Gl~~rl~~eL~ 319 (376)
|.+++..++...+....++|+||||+|++||+.+++++.+.
T Consensus 291 i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~ 331 (377)
T 2ych_A 291 LRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLG 331 (377)
T ss_dssp HHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhC
Confidence 66666655555556678899999999999999999999994
No 19
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=99.69 E-value=7.3e-16 Score=154.52 Aligned_cols=219 Identities=16% Similarity=0.155 Sum_probs=135.9
Q ss_pred CCcEEEEeCCCCChHhHHHHHHHhhcccCCCceecchhhhhhhhhcCC------ceEEEEecCCCceEEEEeeCCe----
Q psy16631 105 EHPVLLTEAPLNPRRNREKAAEIFFESFNVPALYVSMQAVLSLYATGR------TTGVVLDSGDGVTHAVPIYEGF---- 174 (376)
Q Consensus 105 ~~~vvl~~~~~~~~~~r~~~~~~lfe~~~~~~v~~~~~~~~a~~~~g~------~tglVVDiG~~~t~i~pv~dG~---- 174 (376)
-..++++.|..++..+|+.+.+. .+..|++.+.++++|.||++++|. .+-+|+|+|+++++++.+.-+.
T Consensus 135 v~~~VITVPa~f~~~qr~a~~~A-a~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~ 213 (605)
T 4b9q_A 135 VTEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGE 213 (605)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSC
T ss_pred CCeEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCC
Confidence 45789999999999999876655 477999999999999999988753 4569999999999999885332
Q ss_pred --e-ccccceeecccHHHHHHHHHHHHHhc-----CCCCccch-----HHHHHHHHHHhcccccCCccccccCCCCceEE
Q psy16631 175 --A-MPHSIMRNDIAGRDVTRYLKLLLRKE-----GVNFRTTA-----EFEIVRTIKEKACYLSSNPVKEETTDSEKHTY 241 (376)
Q Consensus 175 --~-~~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~~~~~~~ 241 (376)
. +........+||.++++.+.+++..+ +.++.... -...+|.+|+.++..... .....+
T Consensus 214 ~~~evla~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~--------~i~~~~ 285 (605)
T 4b9q_A 214 KTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQT--------DVNLPY 285 (605)
T ss_dssp EEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEE--------EEEEEE
T ss_pred ceEEEEEecCCCCcChHHHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCe--------EEEEee
Confidence 1 12222346799999999998877642 33322111 145677888776532210 000011
Q ss_pred ECCC--C-c--EEEeccccccccccccCCCCCCCCCCCHHHHHHHHHHhCCHHHHHHhhcCeEeccCcccccCHHHHHHH
Q psy16631 242 VLPD--G-S--SLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLFKGFGDRLLA 316 (376)
Q Consensus 242 ~lpd--~-~--~i~v~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~Gl~~rl~~ 316 (376)
...+ | . .+.++.+.+ |-++.|.+ ..+.+.|.+++..... ...-...|+|+||+|.+|++.++|++
T Consensus 286 ~~~~~~g~~~~~~~itr~~~---e~l~~~~~-----~~i~~~v~~~L~~a~~--~~~~i~~VvLvGG~sriP~v~~~l~~ 355 (605)
T 4b9q_A 286 ITADATGPKHMNIKVTRAKL---ESLVEDLV-----NRSIEPLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAE 355 (605)
T ss_dssp EEECSSSEEEEEEEEEHHHH---HHHHHHHH-----HHTTHHHHHHHHHTTC--CGGGCSEEEEESGGGGSHHHHHHHHH
T ss_pred eccCCCCCeeEEEEEeHHHH---HHHHHHHH-----HHHHHHHHHHHHHcCC--CHHHCcEEEEeCCccCchHHHHHHHH
Confidence 1111 1 1 222222211 11111100 1122334444433311 11224679999999999999999998
Q ss_pred HHHhhCCCCceEEEeCCCCCccchhhhHHHhhcc
Q psy16631 317 EIRKNAPKDLKIRISAPQERLYSTWIGGSILASL 350 (376)
Q Consensus 317 eL~~~~~~~~~i~v~~~~~~~~~~w~Gasi~a~l 350 (376)
.+.. .+....+|..++-.||++.|..
T Consensus 356 ~fg~--------~~~~~~nPdeaVA~GAai~a~~ 381 (605)
T 4b9q_A 356 FFGK--------EPRKDVNPDEAVAIGAAVQGGV 381 (605)
T ss_dssp HHTS--------CCCSSSCTTTHHHHHHHHHHHH
T ss_pred Hhcc--------CcCCCcChhHHHHHhHHHHHHH
Confidence 8832 2344557888999999998864
No 20
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.69 E-value=2.8e-17 Score=153.93 Aligned_cols=179 Identities=18% Similarity=0.123 Sum_probs=128.4
Q ss_pred cEEEeCCCcceEEEEcCCCCCCeeccccceecCccccc----------cCC----CCCCeeeCcchhhccCcceeecccc
Q psy16631 11 PVVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRVM----------AGA----LEGDIFVGPKAEEHRGLLSIHYPME 76 (376)
Q Consensus 11 ~vViD~Gs~~~k~G~a~~~~P~~~~ps~v~~~~~~~~~----------~~~----~~~~~~~g~~~~~~~~~~~~~~p~~ 76 (376)
.+.||+|+.++|+-. ++ .-.+.+||.++........ .+. .+..+.+|++|. +|+.
T Consensus 23 ~igiDlG~~~tkv~~-~~-g~~~~~PSvva~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~vG~~A~---------~~l~ 91 (346)
T 2fsj_A 23 VVGLDVGYGDTKVIG-VD-GKRIIFPSRWAVTETESWGIGGKIPVLSTDGGQTKFIYGKYASGNNIR---------VPQG 91 (346)
T ss_dssp EEEEEECSSEEEEEC-GG-GCEEEEESCEEEECCSCC----CCCCBBSSTTSSEEEEGGGCCSSCCB---------CCSS
T ss_pred EEEEecCCcceeEEe-cC-CCEEEecceeeeccccccCcCcceEEEEecccccccCCcEEEEcccee---------cccC
Confidence 589999999999864 33 2356789999875442110 000 134566776653 7999
Q ss_pred CCcccCHHHHHHHHHHhhcCccCCCCCCCCcEE--EEeCCCCChHhHHHHHHHhhcc-------------cCCCceecch
Q psy16631 77 HGIITDWNDMERIWQYVYSNDQLQTFSEEHPVL--LTEAPLNPRRNREKAAEIFFES-------------FNVPALYVSM 141 (376)
Q Consensus 77 ~g~i~d~~~~~~~l~~~~~~~~l~~~~~~~~vv--l~~~~~~~~~~r~~~~~~lfe~-------------~~~~~v~~~~ 141 (376)
++.+.| +..+.++.+.+.+..-........++ ++.|......+|+.+.+.+... +++..+.+++
T Consensus 92 ~~~~~~-~~~~~ll~~~l~~~~~~~~~~~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~ 170 (346)
T 2fsj_A 92 DGRLAS-KEAFPLIAAALWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRP 170 (346)
T ss_dssp TTCTTS-TTTHHHHHHHHHHHCCCC---CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEE
T ss_pred CCcccC-hhHHHHHHHHHHHhhhccCCCceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEc
Confidence 999998 77777777777531101112235688 9999888888888888775542 2357799999
Q ss_pred hhhhhhhhc--C-----C-ceEEEEecCCCceEEEEee--CCeeccccceeecccHHHHHHHHHHHHHhc
Q psy16631 142 QAVLSLYAT--G-----R-TTGVVLDSGDGVTHAVPIY--EGFAMPHSIMRNDIAGRDVTRYLKLLLRKE 201 (376)
Q Consensus 142 ~~~~a~~~~--g-----~-~tglVVDiG~~~t~i~pv~--dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~ 201 (376)
+|.+|++++ + . .+-+|||+|+++|+|+.+. +|.++.......++||+++++.+.+.++++
T Consensus 171 Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~~ 240 (346)
T 2fsj_A 171 QGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAKE 240 (346)
T ss_dssp TTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHHHHHH
Confidence 999999974 2 1 3459999999999999998 888766656788999999999998888765
No 21
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.61 E-value=1e-14 Score=139.52 Aligned_cols=198 Identities=12% Similarity=0.075 Sum_probs=130.1
Q ss_pred hHHHHHHHhhcccCCCceecchhhhhhhhhcCC-----ceEEEEecCCCceEEEEeeCCeeccccceeecccHHHHHHHH
Q psy16631 120 NREKAAEIFFESFNVPALYVSMQAVLSLYATGR-----TTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVTRYL 194 (376)
Q Consensus 120 ~r~~~~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~tglVVDiG~~~t~i~pv~dG~~~~~~~~~~~~GG~~l~~~l 194 (376)
..+.+.+ +++..|+....++.+|+|+++++.. .+.+|||+|+++|+++.+.+|.+... ...++||+++|+.+
T Consensus 169 ~v~n~~~-~~~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~~~--~~i~~GG~~it~dI 245 (419)
T 4a2a_A 169 VYEMFYN-FLQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIKI--SYVPVGMKHVIKDV 245 (419)
T ss_dssp HHHHHHH-HHHTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEEEE--EEESCCHHHHHHHH
T ss_pred HHHHHHH-HHHHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEEEE--EecccHHHHHHHHH
Confidence 3344444 4578999999999999999988764 36899999999999999999998864 46899999999999
Q ss_pred HHHHHhcCCCCccchHHHHHHHHHHhcccccCCccccccCCCCceEEECC--CC-cEEEeccc-cccccccccCCCCCCC
Q psy16631 195 KLLLRKEGVNFRTTAEFEIVRTIKEKACYLSSNPVKEETTDSEKHTYVLP--DG-SSLDIGHA-RFRAPEVLFRPDLIGE 270 (376)
Q Consensus 195 ~~~l~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~~~~~~~lp--d~-~~i~v~~~-r~~~~E~lF~p~~~~~ 270 (376)
.+.+.. ..+.+|.+|.+++...... .....++++ ++ ....++.. ...+.+..+
T Consensus 246 a~~l~~---------~~~~AE~iK~~~g~a~~~~-------~~~~~i~v~~~~~~~~~~is~~~l~~ii~p~v------- 302 (419)
T 4a2a_A 246 SAVLDT---------SFEESERLIITHGNAVYND-------LKEEEIQYRGLDGNTIKTTTAKKLSVIIHARL------- 302 (419)
T ss_dssp HHHHTC---------CHHHHHHHHHHHCCSCCTT-------CCCCEEEEECTTSCSEEEEEHHHHHHHHHHHH-------
T ss_pred HHHHCC---------CHHHHHHHHHHhccCcccC-------CCCceEEEeecCCccceEEcHHHHHHHHHHHH-------
Confidence 887632 4588999999987654321 111223222 11 12222221 111111111
Q ss_pred CCCCHHHHHHHHHHhCCH---HH-HHHhhcCeEeccCcccccCHHHHHHHHHHhhCCCCceEEEeC-----C--------
Q psy16631 271 ESEGIHDVLYYAIQKSDL---DL-RKVLYQNIVLSGGSTLFKGFGDRLLAEIRKNAPKDLKIRISA-----P-------- 333 (376)
Q Consensus 271 ~~~~l~~~I~~~i~~~~~---d~-r~~l~~nIvl~GG~s~i~Gl~~rl~~eL~~~~~~~~~i~v~~-----~-------- 333 (376)
..+.+.|.+.|..... +. .....+.|+||||+|++||+.+.+++.+. .++++.. |
T Consensus 303 --eei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g------~~vri~~~~~~~p~~~~~~~~ 374 (419)
T 4a2a_A 303 --REIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFK------SPVRTGCYANSDRPSIINADE 374 (419)
T ss_dssp --HHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHT------SCEEECCGGGSSSCCCBTCHH
T ss_pred --HHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHC------CCeEEEecCCCCchhccCccc
Confidence 1355566666655432 22 34567889999999999999999999994 3555554 3
Q ss_pred --CCCccchhhhHHHhhccc
Q psy16631 334 --QERLYSTWIGGSILASLD 351 (376)
Q Consensus 334 --~~~~~~~w~Gasi~a~l~ 351 (376)
.+|.|++-.|-.+++.-.
T Consensus 375 ~~~~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 375 VANDPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp HHTCGGGHHHHHTTCC----
T ss_pred ccCCchHHHHHHHHHHHhhc
Confidence 368888889987777543
No 22
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.41 E-value=1.2e-12 Score=121.20 Aligned_cols=177 Identities=10% Similarity=0.090 Sum_probs=105.2
Q ss_pred cccCCCceecchhhhhhhhhcC-----CceEEEEecCCCceEEEEeeCCee-ccccceeecccHHHHHHHHHHHHHhcCC
Q psy16631 130 ESFNVPALYVSMQAVLSLYATG-----RTTGVVLDSGDGVTHAVPIYEGFA-MPHSIMRNDIAGRDVTRYLKLLLRKEGV 203 (376)
Q Consensus 130 e~~~~~~v~~~~~~~~a~~~~g-----~~tglVVDiG~~~t~i~pv~dG~~-~~~~~~~~~~GG~~l~~~l~~~l~~~~~ 203 (376)
+.+++..+.++++|.+|+++.+ ..+.+|||||+++|+++.+.+|.+ +.......++||.++++.+.+.+.+++.
T Consensus 136 ~~~~i~~v~~~~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~~~ 215 (320)
T 2zgy_A 136 DTFTIKDVKVMPESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLART 215 (320)
T ss_dssp CCCEEEEEEEEESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCCSB
T ss_pred cEEEEEEEEEecCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHcCC
Confidence 4456788999999999998753 357899999999999999999886 4333456799999999999999876532
Q ss_pred CCccchHHHHHHHH-HHhcccccCCccccccCCCCceEEECCCCcEEEeccccccccccccCCCCCCCCCCCHHHHHHHH
Q psy16631 204 NFRTTAEFEIVRTI-KEKACYLSSNPVKEETTDSEKHTYVLPDGSSLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYA 282 (376)
Q Consensus 204 ~~~~~~~~~~~~~i-K~~~~~~~~~~~~~~~~~~~~~~~~lpd~~~i~v~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~~ 282 (376)
+ .....++++ |.+....... . ...+|. ......+.+ .+. ...+.+.|.+.
T Consensus 216 ~----i~~~~ae~~lk~~~~~~~~~--~---------~i~~~~--------~~~~~~~~i-~~~-----~~~~~~~i~~~ 266 (320)
T 2zgy_A 216 K----GSSYLADDIIIHRKDNNYLK--Q---------RINDEN--------KISIVTEAM-NEA-----LRKLEQRVLNT 266 (320)
T ss_dssp G----GGHHHHHHHHHTTTCHHHHH--H---------HSSSSC--------THHHHHHHH-HHH-----HHHHHHHHHHH
T ss_pred C----CCHHHHHHHHHHhhhhhccc--c---------eecCch--------hhHHHHHHH-HHH-----HHHHHHHHHHH
Confidence 2 234567776 5542110000 0 000000 000000000 000 01122233333
Q ss_pred HHhCCHHHHHHhhcCeEeccCcccccCHHHHHHHHHHhhCCCCceEEEeCCCCCccchhhhHHHhh
Q psy16631 283 IQKSDLDLRKVLYQNIVLSGGSTLFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILA 348 (376)
Q Consensus 283 i~~~~~d~r~~l~~nIvl~GG~s~i~Gl~~rl~~eL~~~~~~~~~i~v~~~~~~~~~~w~Gasi~a 348 (376)
+++. .-...|+|+||+|.+ +.+.+++.+ +.. .-++..+.+|+++.-+|+.+++
T Consensus 267 i~~~------~~~~~vvl~GGga~l--l~~~l~~~~----~~~-~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 267 LNEF------SGYTHVMVIGGGAEL--ICDAVKKHT----QIR-DERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp HTTC------CCCCEEEEESTTHHH--HHHHHHHTS----CCC-GGGEECCSCGGGHHHHHHHHHH
T ss_pred HHhh------cCCCeEEEECChHHH--HHHHHHHHh----CCC-CCceeeCCCcHHHHHHHHHHhc
Confidence 3221 123679999999987 555555433 311 0024556789999999999876
No 23
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.34 E-value=6.9e-12 Score=116.37 Aligned_cols=281 Identities=13% Similarity=0.068 Sum_probs=160.1
Q ss_pred cEEEeCCCcceEEEEc--C---CCCCCeeccccceecCccccc-------cCCCCCCeeeCcchhhccCcceeeccccCC
Q psy16631 11 PVVIDNGSGVIKAGFA--G---DQVPKCCFPNYIGRPKHIRVM-------AGALEGDIFVGPKAEEHRGLLSIHYPMEHG 78 (376)
Q Consensus 11 ~vViD~Gs~~~k~G~a--~---~~~P~~~~ps~v~~~~~~~~~-------~~~~~~~~~~g~~~~~~~~~~~~~~p~~~g 78 (376)
.|.||+|-+++|+-.. + +..-+..|||.++.......- -...+..+++|+.+... -....
T Consensus 9 iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG~~a~~~--------~~~~~ 80 (329)
T 4apw_A 9 VMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIGEQGVED--------SSETS 80 (329)
T ss_dssp EEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCCCCCSCEEEECSSSEEEESCCSSSC--------SGGGC
T ss_pred EEEEecCCceEEEEeccCCCcccceeEEeecccccccccccccCCCCceEEEECCEEEEeCcccccc--------cccCC
Confidence 6889999999999753 2 123457789998765432110 01234678888765311 01111
Q ss_pred cccCHHHHHHHHHHhhcCccCCCC-CCCCcEEEEeCCCCCh--HhHHHHHHHhhcc-------------cCCCceecchh
Q psy16631 79 IITDWNDMERIWQYVYSNDQLQTF-SEEHPVLLTEAPLNPR--RNREKAAEIFFES-------------FNVPALYVSMQ 142 (376)
Q Consensus 79 ~i~d~~~~~~~l~~~~~~~~l~~~-~~~~~vvl~~~~~~~~--~~r~~~~~~lfe~-------------~~~~~v~~~~~ 142 (376)
. +-+....++-.++.. .+... ..+-.+++..|.-.-. ..|+++.+.+-.. +.+..+.+.|+
T Consensus 81 k--~~~~~~~L~l~Aia~-~~~~~~~~~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe 157 (329)
T 4apw_A 81 K--TNLIHKLAAYTAITQ-VLDSNKNNKVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAE 157 (329)
T ss_dssp C--CTTHHHHHHHHHHHT-TCCSSSEEEEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEH
T ss_pred c--CchhHHHHHHHHHHH-HhccccCceEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEec
Confidence 1 113444445555522 23322 1123455555543332 3466666666521 22457899999
Q ss_pred hhhhhhhc----CCceEEEEecCCCceEEEEeeCCeeccccceeecccHHHHHHHHHHHHHh-cCCCCccchHHHHHHHH
Q psy16631 143 AVLSLYAT----GRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVTRYLKLLLRK-EGVNFRTTAEFEIVRTI 217 (376)
Q Consensus 143 ~~~a~~~~----g~~tglVVDiG~~~t~i~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~-~~~~~~~~~~~~~~~~i 217 (376)
+..+++.. ...+.+|||||+++|+++.+.+|.++.......++||.++++.+.+.++. + +.+. .....++++
T Consensus 158 ~~ga~~~~~~~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~~~-~g~~--i~~~~~e~i 234 (329)
T 4apw_A 158 GSGVLFLEQENFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTDLN-NGNL--ITNEQAESA 234 (329)
T ss_dssp HHHHHHHSCCCCTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSSCS-SCSC--TTSBTTTTC
T ss_pred cHHHHhhcchhhccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHHhhc-cCCC--CCHHHHHHH
Confidence 99999876 23577999999999999999999998766667899999999999988776 3 2211 111223333
Q ss_pred HHhcccccCCccccccCCCCceEEECCCCcEEEeccccccccccccCCCCCCCCCCCHHHHHHHHHHh--CCHHHHHHhh
Q psy16631 218 KEKACYLSSNPVKEETTDSEKHTYVLPDGSSLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQK--SDLDLRKVLY 295 (376)
Q Consensus 218 K~~~~~~~~~~~~~~~~~~~~~~~~lpd~~~i~v~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~~i~~--~~~d~r~~l~ 295 (376)
|.. +.... .+....+.. -.+.+.+ ..+.+.|.+.++. +|++ +.
T Consensus 235 ~~~-g~~~~------------------g~~~~~~~~--~~i~~~~----------~e~~~~I~~~i~~~~~~~~----~~ 279 (329)
T 4apw_A 235 LNN-GYMKK------------------GGEIDTESS--TVIKKVK----------EKFLKDAIKLIEKRGFKLD----QL 279 (329)
T ss_dssp SSS-CSSCE------------------ECTTCCSTT--HHHHHHH----------HHHHHHHHHHHHHHTCCTT----SC
T ss_pred Hhc-CCccc------------------CCcchhHHH--HHHHHHH----------HHHHHHHHHHHHHcCCCHH----Hc
Confidence 322 11000 000000000 0000000 1122333333332 3332 35
Q ss_pred cCeEeccCcccccCHHHHHHHHHHhhCCCCceEEEeCCCCCccchhhhHHHhhcc
Q psy16631 296 QNIVLSGGSTLFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASL 350 (376)
Q Consensus 296 ~nIvl~GG~s~i~Gl~~rl~~eL~~~~~~~~~i~v~~~~~~~~~~w~Gasi~a~l 350 (376)
..|+||||+|.+ +.+.+++++ + .++...++|.++...|+-.++..
T Consensus 280 ~~IvltGGGA~l--~~~~l~~~~----~----~~v~v~~~P~~a~a~G~~~~~~~ 324 (329)
T 4apw_A 280 DSLIFIGGTTQK--LKEQISKTY----P----NNSIITNNSQWTTCEGLYKVAVA 324 (329)
T ss_dssp SEEEEESTTHHH--HHHHHHHHS----T----TCEECCSSGGGHHHHHHHHHHHH
T ss_pred cEEEEECChHHH--HHHHHHHHc----C----CCCEecCCChhhHHHHHHHHHhh
Confidence 789999999999 556666654 2 12445778999999998887643
No 24
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.33 E-value=6.5e-12 Score=117.58 Aligned_cols=185 Identities=14% Similarity=0.129 Sum_probs=117.7
Q ss_pred cEEEeCCCcceEEEEcCCCCCCeeccccceecCcccc-cc--------------CCCCCC-eeeCcchhhccCcceeecc
Q psy16631 11 PVVIDNGSGVIKAGFAGDQVPKCCFPNYIGRPKHIRV-MA--------------GALEGD-IFVGPKAEEHRGLLSIHYP 74 (376)
Q Consensus 11 ~vViD~Gs~~~k~G~a~~~~P~~~~ps~v~~~~~~~~-~~--------------~~~~~~-~~~g~~~~~~~~~~~~~~p 74 (376)
.+-+|+|-.++|+ ..++ =...|||.++...+... +. ...... +++|+.|....... .+.
T Consensus 6 iigiD~G~~~~K~-~~~~--~~~~fPS~v~~~~~~~~~l~~~~~~~~~~~~v~v~~~~~~~y~vG~~A~~~~~~~--~~~ 80 (355)
T 3js6_A 6 VMALDFGNGFVKG-KIND--EKFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDKTTNTG--KDT 80 (355)
T ss_dssp EEEEEECSSEEEE-EETT--EEEEEESEEEECCSSCCSSTTTSCCCCSCEEEEETTCTTCCEEESTTHHHHCSCC--EEC
T ss_pred EEEEEcCCCcEEE-ecCC--eEEEeceeeeecccCcccccccccCCCCceEEEEecCCeEEEEEchhhhhcCccc--ccc
Confidence 6889999999996 4443 25778999876433210 00 012345 88998875432221 111
Q ss_pred c-cCCcccCHHHHHHHHHHhhcC--ccCCCCCCCCcEEEEeCCCCChHhH-HHHHHHhhcc-----------cCCCceec
Q psy16631 75 M-EHGIITDWNDMERIWQYVYSN--DQLQTFSEEHPVLLTEAPLNPRRNR-EKAAEIFFES-----------FNVPALYV 139 (376)
Q Consensus 75 ~-~~g~i~d~~~~~~~l~~~~~~--~~l~~~~~~~~vvl~~~~~~~~~~r-~~~~~~lfe~-----------~~~~~v~~ 139 (376)
+ .+....+ +....++..++.. ..+..+..+..+++..|.-.....| +++.+.+... +.+..|.+
T Consensus 81 ~~~~~k~~~-~~~~iL~l~Ala~~~~~~~~~~~~~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v 159 (355)
T 3js6_A 81 ASTNDRYDI-KSFKDLVECSIGLLAREVPEEVVNVVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKI 159 (355)
T ss_dssp CCSTTGGGS-HHHHHHHHHHHHHHHTTSCSSEEEEEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEE
T ss_pred cccCCcccC-HHHHHHHHHHHHHHHHhccCCCceEEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEE
Confidence 1 2333333 2222233233210 0121111133577777776666665 4677766532 22478999
Q ss_pred chhhhhhhhhcC-----------CceEEEEecCCCceEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhc
Q psy16631 140 SMQAVLSLYATG-----------RTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVTRYLKLLLRKE 201 (376)
Q Consensus 140 ~~~~~~a~~~~g-----------~~tglVVDiG~~~t~i~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~ 201 (376)
++++.+|+++.+ ..+.+|||||+++|+++.+.+|.++......+++||..+++.+.+.++++
T Consensus 160 ~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~ 232 (355)
T 3js6_A 160 VAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSKK 232 (355)
T ss_dssp EEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC--
T ss_pred EeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHHh
Confidence 999999999874 45679999999999999999999988777788999999999999999875
No 25
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=98.79 E-value=2.5e-08 Score=95.20 Aligned_cols=177 Identities=16% Similarity=0.092 Sum_probs=105.8
Q ss_pred hhhhhhhhhc----CC-ceEEEEecCCCceEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhcCCCCccchHHHHHH
Q psy16631 141 MQAVLSLYAT----GR-TTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVTRYLKLLLRKEGVNFRTTAEFEIVR 215 (376)
Q Consensus 141 ~~~~~a~~~~----g~-~tglVVDiG~~~t~i~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~ 215 (376)
.++.+|.++. ++ ...++||+|+++|+++.+.+|..+... .+++||+++|..+..-|.-. +.+.+|
T Consensus 390 ~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv~a~--~ip~gG~~VT~DIA~~Lgt~--------d~~~AE 459 (610)
T 2d0o_A 390 AEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDIIAT--HLAGAGDMVTMIIARELGLE--------DRYLAE 459 (610)
T ss_dssp EHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCEEEE--EEECSHHHHHHHHHHHHTCC--------CHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEEEE--EeccchHHHHHHHHHHhCCC--------CHHHHH
Confidence 6677777665 22 457899999999999999999888754 68999999999999988642 468999
Q ss_pred HHHHhcccccCCc----cccccCCCCceEE-ECCCC-----cEEEeccccccccccccCCCCCCCCCCCHHH--HHHHHH
Q psy16631 216 TIKEKACYLSSNP----VKEETTDSEKHTY-VLPDG-----SSLDIGHARFRAPEVLFRPDLIGEESEGIHD--VLYYAI 283 (376)
Q Consensus 216 ~iK~~~~~~~~~~----~~~~~~~~~~~~~-~lpd~-----~~i~v~~~r~~~~E~lF~p~~~~~~~~~l~~--~I~~~i 283 (376)
+||. ++....+. ..+ .....| .-+-+ +.+.+.+ ....++ .|. .++.+ ++.+.+
T Consensus 460 rIK~-YG~A~ve~lf~~~de----de~Iev~~~~lgp~~~~Rv~~~~~--~~L~~I--~pR------~~vEElelVR~~a 524 (610)
T 2d0o_A 460 EIKK-YPLAKVESLFHLRHE----DGSVQFFSTPLPPAVFARVCVVKA--DELVPL--PGD------LALEKVRAIRRSA 524 (610)
T ss_dssp HHHH-SCEEEECSSSEEEET----TSCEEECSSCCCGGGTTCEEEECS--SCEEEC--CTT------CCHHHHHHHHHHH
T ss_pred Hhcc-cCceeecccccccCC----CCeEEEecCCCCcceeeeeecccc--cceeee--CCC------cchHHHHHHHHHH
Confidence 9999 87665433 111 111111 00111 0000000 000011 111 12444 333332
Q ss_pred HhC---CHHHHH----H-hh-----cCeEeccCcccccCHHHHHHHHHHhhCCCCceEEEeC-----CCCCccchhhhHH
Q psy16631 284 QKS---DLDLRK----V-LY-----QNIVLSGGSTLFKGFGDRLLAEIRKNAPKDLKIRISA-----PQERLYSTWIGGS 345 (376)
Q Consensus 284 ~~~---~~d~r~----~-l~-----~nIvl~GG~s~i~Gl~~rl~~eL~~~~~~~~~i~v~~-----~~~~~~~~w~Gas 345 (376)
++. ...+|+ . +- ..||||||+|+++|+.+-..+.|.. +.+++-. ...|.|++-.|--
T Consensus 525 k~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~-----y~VRiGrP~~~gv~gP~fAtAvGLl 599 (610)
T 2d0o_A 525 KERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAH-----YRLVAGRGNIRGSEGPRNAVATGLI 599 (610)
T ss_dssp HHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTT-----SSCEEEECCGGGTSTTSCHHHHHHH
T ss_pred hhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCc-----CCeEEecCCccccCCCcHHHHHHHH
Confidence 111 111221 1 22 4599999999999999999998864 2344433 3468888888855
Q ss_pred Hh
Q psy16631 346 IL 347 (376)
Q Consensus 346 i~ 347 (376)
++
T Consensus 600 ly 601 (610)
T 2d0o_A 600 LS 601 (610)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 26
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=98.77 E-value=2.3e-08 Score=95.67 Aligned_cols=177 Identities=15% Similarity=0.107 Sum_probs=106.1
Q ss_pred hhhhhhhhhc----CC-ceEEEEecCCCceEEEEeeCCeeccccceeecccHHHHHHHHHHHHHhcCCCCccchHHHHHH
Q psy16631 141 MQAVLSLYAT----GR-TTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDVTRYLKLLLRKEGVNFRTTAEFEIVR 215 (376)
Q Consensus 141 ~~~~~a~~~~----g~-~tglVVDiG~~~t~i~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~ 215 (376)
.+|.+|.++. ++ ...++||+|+++|+++.+.+|..+... .+++||+++|..+..-|.-. +.+.+|
T Consensus 392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv~a~--~ip~gG~~VT~DIA~~Lg~~--------d~~~AE 461 (607)
T 1nbw_A 392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQITAV--HLAGAGNMVSLLIKTELGLE--------DLSLAE 461 (607)
T ss_dssp CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCEEEE--EEECCHHHHHHHHHHHHTCS--------CHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEEEE--EeccchHHHHHHHHHHhCCC--------CHHHHH
Confidence 5677776665 22 457899999999999999999888754 68999999999999988642 468999
Q ss_pred HHHHhcccccCCc----cccccCCCCceEE-ECCCC-----cEEEeccccccccccccCCCCCCCCCCCHHH--HHHHHH
Q psy16631 216 TIKEKACYLSSNP----VKEETTDSEKHTY-VLPDG-----SSLDIGHARFRAPEVLFRPDLIGEESEGIHD--VLYYAI 283 (376)
Q Consensus 216 ~iK~~~~~~~~~~----~~~~~~~~~~~~~-~lpd~-----~~i~v~~~r~~~~E~lF~p~~~~~~~~~l~~--~I~~~i 283 (376)
+||. ++....+. ..+ .....| .-|-+ +.+-+.+ ....++ .|. .++.+ ++.+.+
T Consensus 462 rIK~-YG~A~~e~lf~~~de----de~Iev~~~~lgp~~~~R~~~~~~--~~L~~I--~~R------~~vEElelVR~~a 526 (607)
T 1nbw_A 462 AIKK-YPLAKVESLFSIRHE----NGAVEFFREALSPAVFAKVVYIKE--GELVPI--DNA------SPLEKIRLVRRQA 526 (607)
T ss_dssp HHHH-SCEEEECSSSEEEET----TSCEEECSSCCCGGGTTCEEEEET--TEEEEE--CCS------SCHHHHHHHHHHH
T ss_pred Hhcc-cCceeecccccccCC----CCeEEEecCCCCcceeeeeecccc--cceeee--CCC------cchHHHHHHHHHH
Confidence 9999 77665433 111 111111 00111 0000000 000011 221 12444 333332
Q ss_pred HhC---CHHHHHH-----hh-----cCeEeccCcccccCHHHHHHHHHHhhCCCCceEEEeC-----CCCCccchhhhHH
Q psy16631 284 QKS---DLDLRKV-----LY-----QNIVLSGGSTLFKGFGDRLLAEIRKNAPKDLKIRISA-----PQERLYSTWIGGS 345 (376)
Q Consensus 284 ~~~---~~d~r~~-----l~-----~nIvl~GG~s~i~Gl~~rl~~eL~~~~~~~~~i~v~~-----~~~~~~~~w~Gas 345 (376)
++. ...+|+. +- ..||||||+|+++|+.+-..+.|..+ .+++-. ...|.|++-.|--
T Consensus 527 k~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~-----~VRiGrP~~~g~~gP~fAtAvGLl 601 (607)
T 1nbw_A 527 KEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHY-----GVVAGQGNIRGTEGPRNAVATGLL 601 (607)
T ss_dssp HHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTT-----TCEEEECCGGGTSCSCCHHHHHHH
T ss_pred hhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcC-----CeEEecCCccccCCchHHHHHHHH
Confidence 111 1112221 22 45999999999999999999999762 333332 3468888888865
Q ss_pred Hh
Q psy16631 346 IL 347 (376)
Q Consensus 346 i~ 347 (376)
++
T Consensus 602 ly 603 (607)
T 1nbw_A 602 LA 603 (607)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 27
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=98.13 E-value=3.6e-05 Score=69.12 Aligned_cols=176 Identities=15% Similarity=0.174 Sum_probs=92.2
Q ss_pred ceecchhhhhhhhhcC---CceEEEEecCCCceEEEEe-eCCeeccc-cceeecccHHHHHHHHHHHHHhcCCCCccchH
Q psy16631 136 ALYVSMQAVLSLYATG---RTTGVVLDSGDGVTHAVPI-YEGFAMPH-SIMRNDIAGRDVTRYLKLLLRKEGVNFRTTAE 210 (376)
Q Consensus 136 ~v~~~~~~~~a~~~~g---~~tglVVDiG~~~t~i~pv-~dG~~~~~-~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~ 210 (376)
.+..++++.+.+++.. .....|+|+|.+.+.++-+ .+|..... .-.++..|+-+..+.+.+.|.. +++.
T Consensus 73 ~~~~Vne~~aha~a~~~~~~~~~~vl~lgG~~~~~~~~~~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~---~~~~--- 146 (276)
T 4ehu_A 73 ADKQISELSCHARGVNFIIPETRTIIDIGGQDAKVLKLDNNGRLLNFLMNDKCAAGTGRFLDVMAKIIEV---DVSE--- 146 (276)
T ss_dssp CSEECCHHHHHHHHHHHHSTTCCEEEEECSSCEEEEEECTTSCEEEEEEECSCSTTSHHHHHHHHHHHTC---CGGG---
T ss_pred CCcccchHHHHHHHHHHhCCCCCeEEEEcCCCceEEEEEecCceEEEEeCCCcCcchhhHHHHHHHHhcc---Chhh---
Confidence 3556778888777653 3456899999999988877 45654321 1234566766666666666643 2221
Q ss_pred HHHHHHHHHhcccccCCccccccCCCCceEEECCCCcEEEeccccccccccccCCCCCCCCCCCHHHHHHHHHHhCCHHH
Q psy16631 211 FEIVRTIKEKACYLSSNPVKEETTDSEKHTYVLPDGSSLDIGHARFRAPEVLFRPDLIGEESEGIHDVLYYAIQKSDLDL 290 (376)
Q Consensus 211 ~~~~~~iK~~~~~~~~~~~~~~~~~~~~~~~~lpd~~~i~v~~~r~~~~E~lF~p~~~~~~~~~l~~~I~~~i~~~~~d~ 290 (376)
...+... ...+.+ -......|. ....+..-.......++. .++.+.|.+.+.. .-.
T Consensus 147 ---~~~~~~~----a~~~~~---i~~~~~~f~--~s~~~~~~~~~~~~~di~----------a~~~~~v~~~l~~--~~~ 202 (276)
T 4ehu_A 147 ---LGSISMN----SQNEVS---ISSTCTVFA--ESEVISHLSENAKIEDIV----------AGIHTSVAKRVSS--LVK 202 (276)
T ss_dssp ---HHHHHTT----CSSCCC---CCCCSHHHH--HHHHHHHHHTTCCHHHHH----------HHHHHHHHHHHHH--HHH
T ss_pred ---hHHHHhc----CCCCCC---cCCccchhh--hhHHHHhhhccccHHHHH----------HHHHHHHHHHHHH--HHH
Confidence 1111100 000000 000000000 000000000000000000 2333444443322 122
Q ss_pred HHHhhcCeEeccCcccccCHHHHHHHHHHhhCCCCceEEEeCCCCCccchhhhHHHhhc
Q psy16631 291 RKVLYQNIVLSGGSTLFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILAS 349 (376)
Q Consensus 291 r~~l~~nIvl~GG~s~i~Gl~~rl~~eL~~~~~~~~~i~v~~~~~~~~~~w~Gasi~a~ 349 (376)
+....+.|+|+||.+..|++.++|++.+. .++..+++|++..-.||+++|.
T Consensus 203 ~~~~~~~vvl~GGva~n~~lr~~l~~~~g--------~~~~~p~~p~~~~A~GAAl~A~ 253 (276)
T 4ehu_A 203 RIGVQRNVVMVGGVARNSGIVRAMAREIN--------TEIIVPDIPQLTGALGAALYAF 253 (276)
T ss_dssp HHCCCSSEEEESGGGGCHHHHHHHHHHHT--------SCEECCSSGGGHHHHHHHHHHH
T ss_pred hcccCCeEEEecCccchHHHHHHHHHHHC--------CCeeeCCCcchHHHHHHHHHHH
Confidence 33445789999999999999999998772 3466778899999999999983
No 28
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=97.43 E-value=0.0011 Score=59.07 Aligned_cols=48 Identities=19% Similarity=0.290 Sum_probs=39.3
Q ss_pred hcCeEeccCcccccCHHHHHHHHHHhhCCCCceEEEeCCCCCccchhhhHHHhhcc
Q psy16631 295 YQNIVLSGGSTLFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASL 350 (376)
Q Consensus 295 ~~nIvl~GG~s~i~Gl~~rl~~eL~~~~~~~~~i~v~~~~~~~~~~w~Gasi~a~l 350 (376)
.+.|+++||.+.-+++.+.+.+.|.. +|..++.+++..-+||+++|..
T Consensus 209 ~~~i~~~GG~a~n~~~~~~~~~~lg~--------~v~~p~~~~~~~AlGAAl~A~~ 256 (270)
T 1hux_A 209 VKDVVMTGGVAQNYGVRGALEEGLGV--------EIKTSPLAQYNGALGAALYAYK 256 (270)
T ss_dssp CSSEEEESGGGGCHHHHHHHHHHHCS--------CEECCGGGGGHHHHHHHHHHHH
T ss_pred CCeEEEeCccccCHHHHHHHHHHHCC--------CeEeCCCcchHhHHHHHHHHHH
Confidence 36799999999999999999988832 3555667788899999999854
No 29
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=96.26 E-value=0.031 Score=50.82 Aligned_cols=51 Identities=12% Similarity=0.188 Sum_probs=38.4
Q ss_pred HHHhhcccCCCceecchhhhhhhhhc-------CCceEEEEecCCCceEEEEeeCCeecc
Q psy16631 125 AEIFFESFNVPALYVSMQAVLSLYAT-------GRTTGVVLDSGDGVTHAVPIYEGFAMP 177 (376)
Q Consensus 125 ~~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~i~pv~dG~~~~ 177 (376)
.+.+=+.|++| +++.++.-+++++. +..+.++|-+|.+ +-..-+.||.+..
T Consensus 101 ~~~l~~~~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv~~G~l~~ 158 (326)
T 2qm1_A 101 KEQIESALGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGIVAAGKLLH 158 (326)
T ss_dssp HHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECC
T ss_pred HHHHHHHhCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEee
Confidence 33444456787 88889999988762 4578999999988 6677778998775
No 30
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=96.18 E-value=0.011 Score=52.80 Aligned_cols=49 Identities=16% Similarity=0.007 Sum_probs=40.9
Q ss_pred hcCeEeccC-cccccCHHHHHHHHHHhhCCCCceEEEeCCCCCccchhhhHHHhh
Q psy16631 295 YQNIVLSGG-STLFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILA 348 (376)
Q Consensus 295 ~~nIvl~GG-~s~i~Gl~~rl~~eL~~~~~~~~~i~v~~~~~~~~~~w~Gasi~a 348 (376)
.++|+++|| .+..|++.++|.+.+... ..++..++++++...+||++++
T Consensus 237 i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~-----~~~~~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 237 TENIVYIGSSFHNNALLRKVVEDYTVLR-----GCKPYYVENGAFSGAIGALYLE 286 (287)
T ss_dssp CCEEEEESGGGTTCHHHHHHHHHHHHHT-----TCEEEECTTGGGHHHHHHHHTC
T ss_pred CCeEEEeCCchhcCHHHHHHHHHHHhhC-----CceEEECCCccHHHHHHHHHhC
Confidence 457999999 999999999999876542 3567778889999999999876
No 31
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=96.15 E-value=0.012 Score=53.63 Aligned_cols=75 Identities=16% Similarity=0.051 Sum_probs=52.6
Q ss_pred ChHhHHHHHHHhhcccCCCceecchhh---hhhhh----hcC-CceEEEEecCCCceEEEEeeCCeeccccceeecccHH
Q psy16631 117 PRRNREKAAEIFFESFNVPALYVSMQA---VLSLY----ATG-RTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGR 188 (376)
Q Consensus 117 ~~~~r~~~~~~lfe~~~~~~v~~~~~~---~~a~~----~~g-~~tglVVDiG~~~t~i~pv~dG~~~~~~~~~~~~GG~ 188 (376)
...+++.+++.+-+..|++ +.++... .++.. +.+ ..+++|||||+++|.++-+.+|.+.. ....++|+-
T Consensus 95 ~A~N~~~fl~~v~~~~G~~-i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~~~~~~--~~Sl~~G~v 171 (315)
T 1t6c_A 95 RAKNAEEFLERVKREVGLV-VEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKGYKVRE--VISLPIGIV 171 (315)
T ss_dssp TSTTHHHHHHHHHHHTCCC-EEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEETTEEEE--EEEECCCHH
T ss_pred cCcCHHHHHHHHHHHHCCC-EEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeCCceee--EEEEeccHH
Confidence 3456677888887778875 3333322 22221 123 56899999999999999998888764 346899999
Q ss_pred HHHHHH
Q psy16631 189 DVTRYL 194 (376)
Q Consensus 189 ~l~~~l 194 (376)
.+++.+
T Consensus 172 ~l~e~~ 177 (315)
T 1t6c_A 172 NLTETF 177 (315)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988765
No 32
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=95.90 E-value=0.22 Score=45.10 Aligned_cols=51 Identities=14% Similarity=0.152 Sum_probs=38.7
Q ss_pred HHHhhcccCCCceecchhhhhhhhh-------cCCceEEEEecCCCceEEEEeeCCeecc
Q psy16631 125 AEIFFESFNVPALYVSMQAVLSLYA-------TGRTTGVVLDSGDGVTHAVPIYEGFAMP 177 (376)
Q Consensus 125 ~~~lfe~~~~~~v~~~~~~~~a~~~-------~g~~tglVVDiG~~~t~i~pv~dG~~~~ 177 (376)
.+.+-+.|++| |++.++.-+++++ .+..+.++|-+|.+ .-..-|.||++..
T Consensus 89 ~~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~G~l~~ 146 (321)
T 3vgl_A 89 KDKVEQRVGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIIIGNKLRR 146 (321)
T ss_dssp HHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred HHHHhhhhCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEECCEEec
Confidence 34444556887 8888999998776 24578999999987 6677788998775
No 33
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=95.80 E-value=0.0092 Score=54.34 Aligned_cols=74 Identities=12% Similarity=0.145 Sum_probs=49.7
Q ss_pred HhHHHHHHHhhcccCCCceec--chhhhhhh------hhcCCceEEEEecCCCceEEEEeeCCeeccccceeecccHHHH
Q psy16631 119 RNREKAAEIFFESFNVPALYV--SMQAVLSL------YATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDV 190 (376)
Q Consensus 119 ~~r~~~~~~lfe~~~~~~v~~--~~~~~~a~------~~~g~~tglVVDiG~~~t~i~pv~dG~~~~~~~~~~~~GG~~l 190 (376)
.++..+++.+-+.+|++-=.+ -.++-++. +.....+++|+|||+++|.++-+.+|.+... ..+++|.-.+
T Consensus 89 ~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~--~Sl~lG~vrl 166 (315)
T 3mdq_A 89 SNKQVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEILWK--QSFEIGGQRL 166 (315)
T ss_dssp TTHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEEEE--EEESCCHHHH
T ss_pred cCHHHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEeee--EEEechhhHH
Confidence 455677777777788752222 22332222 2222357999999999999999999877653 4689998777
Q ss_pred HHHH
Q psy16631 191 TRYL 194 (376)
Q Consensus 191 ~~~l 194 (376)
++.+
T Consensus 167 ~e~f 170 (315)
T 3mdq_A 167 IDRF 170 (315)
T ss_dssp HHHS
T ss_pred HHHh
Confidence 7644
No 34
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=95.74 E-value=0.15 Score=46.36 Aligned_cols=52 Identities=15% Similarity=0.125 Sum_probs=37.3
Q ss_pred CeEeccCcccccCHHHHHHHHHHhhCCC-CceEEEeCCCCCccchhhhHHHhh
Q psy16631 297 NIVLSGGSTLFKGFGDRLLAEIRKNAPK-DLKIRISAPQERLYSTWIGGSILA 348 (376)
Q Consensus 297 nIvl~GG~s~i~Gl~~rl~~eL~~~~~~-~~~i~v~~~~~~~~~~w~Gasi~a 348 (376)
.|||.||.+..+-|.+++++.+.+.... ...++|....-...+.-+||+.++
T Consensus 272 ~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 272 VVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp EEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred EEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 5888888888777888888888776532 234566655555667888998775
No 35
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=95.10 E-value=0.058 Score=48.23 Aligned_cols=52 Identities=15% Similarity=0.130 Sum_probs=41.8
Q ss_pred HHHHHhhcccCCCceecchhhhhhhhhc-----CCceEEEEecCCCceEEEEeeCCeecc
Q psy16631 123 KAAEIFFESFNVPALYVSMQAVLSLYAT-----GRTTGVVLDSGDGVTHAVPIYEGFAMP 177 (376)
Q Consensus 123 ~~~~~lfe~~~~~~v~~~~~~~~a~~~~-----g~~tglVVDiG~~~t~i~pv~dG~~~~ 177 (376)
.+.+.+ +.|++| |++.++.-+++++. +..+.++|-+|.+ .-..-|.||++..
T Consensus 86 ~l~~~l-~~~~~p-v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtG-iG~giv~~G~l~~ 142 (292)
T 2gup_A 86 SWYEAL-SSYQLP-VHLENDANCVGLSELLAHPELENAACVVIGTG-IGGAMIINGRLHR 142 (292)
T ss_dssp BHHHHT-GGGCCC-EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSS-EEEEEEETTEEEC
T ss_pred CHHHHH-HHcCCC-EEEechHHHHHHHHHHhcCCCCeEEEEEECCc-eEEEEEECCEEEe
Confidence 466777 889998 88899999998873 6678999999986 5566778998765
No 36
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=94.81 E-value=0.071 Score=51.87 Aligned_cols=73 Identities=14% Similarity=0.047 Sum_probs=50.1
Q ss_pred HhHHHHHHHhhcccCCCceecchh---hhhhhhh----cC-CceEEEEecCCCceEEEEeeCCeeccccceeecccHHHH
Q psy16631 119 RNREKAAEIFFESFNVPALYVSMQ---AVLSLYA----TG-RTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDV 190 (376)
Q Consensus 119 ~~r~~~~~~lfe~~~~~~v~~~~~---~~~a~~~----~g-~~tglVVDiG~~~t~i~pv~dG~~~~~~~~~~~~GG~~l 190 (376)
.++..+++.+-+..|++- .++.. +-+...| .. ...++|||||+++|.++-+.+|.+.. ...+++|.-.+
T Consensus 96 ~N~~~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~--~~Sl~lG~vrl 172 (513)
T 1u6z_A 96 LNATDFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPIL--VESRRMGCVSF 172 (513)
T ss_dssp TTHHHHHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEETTEEEE--EEEESCCHHHH
T ss_pred cCHHHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEeCCeeeE--EEEEeccHHHH
Confidence 455678888888888752 23222 2222222 11 23799999999999999988888764 34689999888
Q ss_pred HHHH
Q psy16631 191 TRYL 194 (376)
Q Consensus 191 ~~~l 194 (376)
++.+
T Consensus 173 te~f 176 (513)
T 1u6z_A 173 AQLY 176 (513)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7754
No 37
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=94.49 E-value=0.13 Score=47.34 Aligned_cols=73 Identities=8% Similarity=-0.078 Sum_probs=49.8
Q ss_pred CHHHHHHHHHHhCCH-HHHHHhhcCeEeccC-cccccCHHHHHHHHHHhhCCCCceEEEeCCCCCccchhhhHHHhh
Q psy16631 274 GIHDVLYYAIQKSDL-DLRKVLYQNIVLSGG-STLFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILA 348 (376)
Q Consensus 274 ~l~~~I~~~i~~~~~-d~r~~l~~nIvl~GG-~s~i~Gl~~rl~~eL~~~~~~~~~i~v~~~~~~~~~~w~Gasi~a 348 (376)
+|..+|.+.|.++.. -.++.-.++|+++|| .+..|++.+.|.+.|.--... .+++..++++++...+||++.+
T Consensus 284 gll~sVa~~I~~lA~l~A~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g--~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 284 ATLVTITNNIGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKG--QLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTT--SCCEEEETTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcC--CeeEEEcCCccHHHHHHHHHHh
Confidence 455555555544321 123444568999999 999999999999998632222 2345556679999999998865
No 38
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=94.14 E-value=3.2 Score=37.59 Aligned_cols=91 Identities=14% Similarity=0.062 Sum_probs=54.8
Q ss_pred HHHHHHHHHHhhcCccCCCCCC--CCcEEEEeCCCCChHhHHHHHHHhhcccC---CCceecchhhhhhhhhcCCceEEE
Q psy16631 83 WNDMERIWQYVYSNDQLQTFSE--EHPVLLTEAPLNPRRNREKAAEIFFESFN---VPALYVSMQAVLSLYATGRTTGVV 157 (376)
Q Consensus 83 ~~~~~~~l~~~~~~~~l~~~~~--~~~vvl~~~~~~~~~~r~~~~~~lfe~~~---~~~v~~~~~~~~a~~~~g~~tglV 157 (376)
|+.+...++.++.+ .+..+. -..+-+..|-.........+.+.+=+.|+ .| |.+.++.-+++++....++++
T Consensus 49 ~~~i~~~i~~~~~~--~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~p-v~v~NDa~aaa~a~~~~~~v~ 125 (347)
T 2ch5_A 49 VERINEMVNRAKRK--AGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSES-YLITTDAAGSIATATPDGGVV 125 (347)
T ss_dssp HHHHHHHHHHHHHH--HTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSC-EEEEEHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHHHHh--cCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCce-EEEECcHHHHHHhhCCCCcEE
Confidence 34555666666532 333322 23566766766555444455566656675 44 788899999888854467888
Q ss_pred EecCCCceEEEEeeCCeec
Q psy16631 158 LDSGDGVTHAVPIYEGFAM 176 (376)
Q Consensus 158 VDiG~~~t~i~pv~dG~~~ 176 (376)
|-+|.+.-......+|...
T Consensus 126 v~~GTGig~~~v~~~G~~c 144 (347)
T 2ch5_A 126 LISGTGSNCRLINPDGSES 144 (347)
T ss_dssp EEESSSEEEEEECTTSCEE
T ss_pred EEEcCCceeEEEcCCCCEE
Confidence 8888765443322366543
No 39
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=93.81 E-value=0.32 Score=44.03 Aligned_cols=51 Identities=18% Similarity=0.209 Sum_probs=38.6
Q ss_pred HHHhhccc-CCCceecchhhhhhhhhc-------CCceEEEEecCCCceEEEEeeCCeecc
Q psy16631 125 AEIFFESF-NVPALYVSMQAVLSLYAT-------GRTTGVVLDSGDGVTHAVPIYEGFAMP 177 (376)
Q Consensus 125 ~~~lfe~~-~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~i~pv~dG~~~~ 177 (376)
.+.+-+.| ++| |++.++.-+++++. +..+.++|-+|.+ .-..-|.||++..
T Consensus 110 ~~~l~~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~gii~~G~l~~ 168 (321)
T 3r8e_A 110 VEILRSEFPHIH-FKIENDAKCAALGEYYFGENKRMQTFILLALGTG-VGSGVMMNGKLFI 168 (321)
T ss_dssp HHHHHHHCTTSE-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred HHHHHHHcCCCC-EEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEec
Confidence 33444557 787 78889998887652 4578999999987 6677788999876
No 40
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=93.65 E-value=0.044 Score=49.58 Aligned_cols=25 Identities=28% Similarity=0.521 Sum_probs=23.8
Q ss_pred ceEEEEecCCCceEEEEeeCCeecc
Q psy16631 153 TTGVVLDSGDGVTHAVPIYEGFAMP 177 (376)
Q Consensus 153 ~tglVVDiG~~~t~i~pv~dG~~~~ 177 (376)
.++++||||+.+|+|+|+.+|+++.
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~ 151 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVA 151 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECC
T ss_pred CCEEEEEcCcchhhhhhhcCCeecc
Confidence 5799999999999999999999987
No 41
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=93.31 E-value=0.11 Score=50.49 Aligned_cols=73 Identities=15% Similarity=0.121 Sum_probs=50.6
Q ss_pred hHhHHHHHHHhhcccCCCceecc---hhhhhhhh----hcCCceEEEEecCCCceEEEEeeCCeeccccceeecccHHHH
Q psy16631 118 RRNREKAAEIFFESFNVPALYVS---MQAVLSLY----ATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRNDIAGRDV 190 (376)
Q Consensus 118 ~~~r~~~~~~lfe~~~~~~v~~~---~~~~~a~~----~~g~~tglVVDiG~~~t~i~pv~dG~~~~~~~~~~~~GG~~l 190 (376)
..++..+++.+-+.+|++ +.++ .++-+... +.....++|||||+++|.++-+.+|.+... ..+++|.-.+
T Consensus 99 A~N~~~fl~~i~~~tG~~-ievIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~~~~~~~~--~Sl~lG~vrl 175 (508)
T 3hi0_A 99 AENGPDFIREAEAILGCE-IEVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIKDKSCGEG--ITLPLGGLRL 175 (508)
T ss_dssp STTHHHHHHHHHHHHTSC-EEECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEETTEECCC--EEESCCHHHH
T ss_pred CcCHHHHHHHHHHHHCCC-eEEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEeeCCeeeeE--EEecceEEeh
Confidence 345667777777778876 2222 22322222 223457899999999999999999988653 4689999888
Q ss_pred HHH
Q psy16631 191 TRY 193 (376)
Q Consensus 191 ~~~ 193 (376)
++.
T Consensus 176 ~e~ 178 (508)
T 3hi0_A 176 SEQ 178 (508)
T ss_dssp HHH
T ss_pred hhc
Confidence 763
No 42
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=91.41 E-value=2 Score=38.28 Aligned_cols=51 Identities=16% Similarity=0.149 Sum_probs=37.5
Q ss_pred CeEeccCcccccCHHHHHHHHHHhhCCCCceEEEeCCCCCccchhhhHHHhhc
Q psy16631 297 NIVLSGGSTLFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILAS 349 (376)
Q Consensus 297 nIvl~GG~s~i~Gl~~rl~~eL~~~~~~~~~i~v~~~~~~~~~~w~Gasi~a~ 349 (376)
.|||.||.+..+.|.+++++.+...... .++|....-.+.+.-+||+.++.
T Consensus 240 ~IvlgGgi~~~~~~~~~l~~~l~~~~~~--~~~i~~s~lg~~a~~~GAa~l~~ 290 (297)
T 4htl_A 240 HIFIGGGITSRPTFIAELKHHMESFGLR--DTIIETATHKNQAGLLGAVYHFL 290 (297)
T ss_dssp EEEEESGGGGSTTHHHHHHHHHTTTCCT--TCEEEECSCTTTHHHHHHHHHHH
T ss_pred EEEEeCcccccHHHHHHHHHHHHHhccC--CCeEEECCcCChHHHHhHHHHHH
Confidence 5899999998888999999999865443 23454444455688899887763
No 43
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=91.17 E-value=0.81 Score=40.50 Aligned_cols=51 Identities=12% Similarity=0.029 Sum_probs=38.0
Q ss_pred HHHHhhcccCCCceecchhhhhhhhhc-------CCceEEEEecCCCceEEEEeeCCeecc
Q psy16631 124 AAEIFFESFNVPALYVSMQAVLSLYAT-------GRTTGVVLDSGDGVTHAVPIYEGFAMP 177 (376)
Q Consensus 124 ~~~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~i~pv~dG~~~~ 177 (376)
+.+.+-+.|++| +.+.++.-+++++. +. +.++|.+|.+ .-..-+.||++..
T Consensus 88 l~~~l~~~~~~p-v~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~GtG-iG~gii~~G~l~~ 145 (289)
T 2aa4_A 88 LVKTLEQLTNLP-TIAINDAQAAAWAEFQALDGDIT-DMVFITVSTG-VGGGVVSGCKLLT 145 (289)
T ss_dssp HHHHHHHHHCSC-EEEEEHHHHHHHHHHHTSCTTCC-CEEEEEESSS-EEEEEEETTEEEC
T ss_pred hHHHHHHHHCCC-EEEechHHHHHHHHHHhCCCCCc-eEEEEEeCcc-EEEEEEECCEEee
Confidence 344444557887 88889999987763 34 8999999988 5667778998775
No 44
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=91.03 E-value=1.1 Score=39.37 Aligned_cols=18 Identities=22% Similarity=0.272 Sum_probs=15.6
Q ss_pred EEEeCCCcceEEEEcCCC
Q psy16631 12 VVIDNGSGVIKAGFAGDQ 29 (376)
Q Consensus 12 vViD~Gs~~~k~G~a~~~ 29 (376)
++||+|..++|.|+..+.
T Consensus 3 L~IDIGNT~ik~gl~~~~ 20 (268)
T 2h3g_X 3 FVLDVGNTNAVLGVFEEG 20 (268)
T ss_dssp EEEEECSSEEEEEEEETT
T ss_pred EEEEECcCcEEEEEEECC
Confidence 789999999999987543
No 45
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=90.69 E-value=1.7 Score=38.75 Aligned_cols=52 Identities=17% Similarity=0.248 Sum_probs=37.4
Q ss_pred HHHhhcccCCCceecchhhhhhhhhc-------CCceEEEEecCCCceEEEEeeCCeeccc
Q psy16631 125 AEIFFESFNVPALYVSMQAVLSLYAT-------GRTTGVVLDSGDGVTHAVPIYEGFAMPH 178 (376)
Q Consensus 125 ~~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~i~pv~dG~~~~~ 178 (376)
.+.+-+.|++| |++.++.-+++++. +..+.++|-+|.+ .-..-|.||++...
T Consensus 91 ~~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~g~l~~G 149 (302)
T 3vov_A 91 RRILEEATGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTG-IGGGVVLGGRVLRG 149 (302)
T ss_dssp HHHHHHHHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHHhhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCc-eeEEEEECCEEeeC
Confidence 34444567887 77889988887653 4578899999977 55556779987653
No 46
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=89.97 E-value=2.7 Score=36.82 Aligned_cols=19 Identities=26% Similarity=0.344 Sum_probs=16.6
Q ss_pred cEEEeCCCcceEEEEcCCC
Q psy16631 11 PVVIDNGSGVIKAGFAGDQ 29 (376)
Q Consensus 11 ~vViD~Gs~~~k~G~a~~~ 29 (376)
.++||+|..++|+|+..++
T Consensus 4 lL~IDIGNT~iK~gl~d~~ 22 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGD 22 (266)
T ss_dssp EEEEEECSSEEEEEEEETT
T ss_pred EEEEEECCCeEEEEEEECC
Confidence 5899999999999997653
No 47
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=89.23 E-value=0.45 Score=43.63 Aligned_cols=75 Identities=21% Similarity=0.130 Sum_probs=49.3
Q ss_pred HhHHHHHHHhhcccCCCceecc---hhhhhhhhhc--------CCceEEEEecCCCceEEEEeeC--Ceec--cccceee
Q psy16631 119 RNREKAAEIFFESFNVPALYVS---MQAVLSLYAT--------GRTTGVVLDSGDGVTHAVPIYE--GFAM--PHSIMRN 183 (376)
Q Consensus 119 ~~r~~~~~~lfe~~~~~~v~~~---~~~~~a~~~~--------g~~tglVVDiG~~~t~i~pv~d--G~~~--~~~~~~~ 183 (376)
.+++.+++.+-+.+|++ +.++ .++.++..|. ...+++|||||+++|.++-+.+ +.+. ......+
T Consensus 102 ~N~~~fl~~v~~~tGi~-ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~Sl 180 (343)
T 3cer_A 102 ENREEFEDEIERILGVR-PEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSM 180 (343)
T ss_dssp TTHHHHHHHHHHHHSSC-CEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEE
T ss_pred cCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccceeEEE
Confidence 45567777777777775 2222 2233333322 2256999999999999998877 4431 1134578
Q ss_pred cccHHHHHHHH
Q psy16631 184 DIAGRDVTRYL 194 (376)
Q Consensus 184 ~~GG~~l~~~l 194 (376)
++|+..+++.+
T Consensus 181 plG~v~lt~~~ 191 (343)
T 3cer_A 181 NIGSVRMTERH 191 (343)
T ss_dssp SCCHHHHHHHT
T ss_pred ehhHHHHHHHh
Confidence 99999998865
No 48
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=89.13 E-value=2.9 Score=38.58 Aligned_cols=51 Identities=18% Similarity=0.218 Sum_probs=37.4
Q ss_pred HHHhhcccCCCceecchhhhhhhhhc-----CCceEEEEecCCCceEEEEeeCCeecc
Q psy16631 125 AEIFFESFNVPALYVSMQAVLSLYAT-----GRTTGVVLDSGDGVTHAVPIYEGFAMP 177 (376)
Q Consensus 125 ~~~lfe~~~~~~v~~~~~~~~a~~~~-----g~~tglVVDiG~~~t~i~pv~dG~~~~ 177 (376)
.+.+-+.|++| |++.+++-+++++. +..+.++|-+|.+ .-..-|.||.+..
T Consensus 181 ~~~l~~~~~~p-V~v~NDanaaalaE~~~g~~~~~~v~l~~GtG-iG~giv~~G~l~~ 236 (380)
T 2hoe_A 181 ANLLKEKYGIE-VWVENDADMGAVGEKWYTKRDDSFAWILTGKG-IGAGIIIDGELYR 236 (380)
T ss_dssp HHHHHHHHCSE-EEEEEHHHHHHHHHHHHTTCCSCEEEEEESSS-CEEEEEETTEECC
T ss_pred HHHHHHHhCCC-EEEechHHHHHHHHHHhCCCCCcEEEEEeCCc-eEEEEEECCEEec
Confidence 34444557887 88889998887763 3378999999987 5566778998765
No 49
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=88.86 E-value=2.9 Score=36.21 Aligned_cols=27 Identities=19% Similarity=0.289 Sum_probs=19.5
Q ss_pred CceEEEEecCCCceEEEEeeCCeecccc
Q psy16631 152 RTTGVVLDSGDGVTHAVPIYEGFAMPHS 179 (376)
Q Consensus 152 ~~tglVVDiG~~~t~i~pv~dG~~~~~~ 179 (376)
...++|||+|...|--+. .+|..+-..
T Consensus 121 ~~~~iVvD~GTA~T~d~v-~~g~~lGG~ 147 (249)
T 3bex_A 121 GKNGIIIDMGTATTVDLV-VNGSYEGGA 147 (249)
T ss_dssp CSCEEEEEESSEEEEEEE-ETTEEEEEE
T ss_pred CCCEEEEEcCCceEEEEE-eCCeEeeEE
Confidence 368999999987665555 888666543
No 50
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=87.44 E-value=2.9 Score=37.27 Aligned_cols=88 Identities=14% Similarity=0.185 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhhcCccCCCCCCCC---cEEEEeCCCCChHhHHHHHHHhhccc--CCCceecchhhhhhhhhc-CCceEE
Q psy16631 83 WNDMERIWQYVYSNDQLQTFSEEH---PVLLTEAPLNPRRNREKAAEIFFESF--NVPALYVSMQAVLSLYAT-GRTTGV 156 (376)
Q Consensus 83 ~~~~~~~l~~~~~~~~l~~~~~~~---~vvl~~~~~~~~~~r~~~~~~lfe~~--~~~~v~~~~~~~~a~~~~-g~~tgl 156 (376)
++.+...++.++. .....+.+- .+-+..|-......... +-+.| +. .+.+.++.-+++++. +..+++
T Consensus 53 ~~~l~~~i~~~l~--~~~~~~~~i~~~~igig~pG~v~~~~~~~----l~~~~~~~~-pv~v~NDa~aaa~ge~~~~~~v 125 (305)
T 1zc6_A 53 WQAVLSTLEAAFQ--QAGLPAAPASACAIGLGLSGVHNRQWAGE----FESQAPGFA-RLSLATDGYTTLLGAHGGQPGI 125 (305)
T ss_dssp HHHHHHHHHHHHH--HTTCCCCCGGGEEEEEEESCCCTTSHHHH----HHHTCCCCS-EEEEECHHHHHHHHHTTTSSEE
T ss_pred HHHHHHHHHHHHH--hcCCChhhhccceEEEEecCCCchHHHHH----HHHhCCCCc-eEEEECCHHHHHHhhcCCCCeE
Confidence 3555666666663 234443332 35666665544332222 22234 34 488999999998884 567899
Q ss_pred EEecCCCceEEEEeeCCeecc
Q psy16631 157 VLDSGDGVTHAVPIYEGFAMP 177 (376)
Q Consensus 157 VVDiG~~~t~i~pv~dG~~~~ 177 (376)
+|-+|.+..-..-+.||....
T Consensus 126 ~v~~GTGigg~~i~~~G~~~~ 146 (305)
T 1zc6_A 126 IVALGTGSIGEALYPDGSHRE 146 (305)
T ss_dssp EEEESSSEEEEEECTTSCEEE
T ss_pred EEEecCCeEEEEEeCCCcEEE
Confidence 999998864343334887653
No 51
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=85.33 E-value=0.61 Score=44.29 Aligned_cols=89 Identities=13% Similarity=0.096 Sum_probs=47.5
Q ss_pred HHHHHHHHHhhcCccCC-CCCCCCcEEEEeCCCCCh------HhHHHHHHHhhcccC---C--Cceecchhh-------h
Q psy16631 84 NDMERIWQYVYSNDQLQ-TFSEEHPVLLTEAPLNPR------RNREKAAEIFFESFN---V--PALYVSMQA-------V 144 (376)
Q Consensus 84 ~~~~~~l~~~~~~~~l~-~~~~~~~vvl~~~~~~~~------~~r~~~~~~lfe~~~---~--~~v~~~~~~-------~ 144 (376)
+.++.+++++.. ... -..+..||.+.-..-+.. ..++.+++.+-+.++ + ..+.++... +
T Consensus 89 ~~l~~Ll~~a~~--~vp~~~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi 166 (452)
T 3zx3_A 89 AYLAECMKMSTE--RIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWI 166 (452)
T ss_dssp HHHHHHHHHHHH--HSCHHHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--hCCHHHcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHH
Confidence 345566665542 111 112456787765553321 134555555444432 2 345554433 2
Q ss_pred hhhhhcCC------ceEEEEecCCCceEEEEeeCCe
Q psy16631 145 LSLYATGR------TTGVVLDSGDGVTHAVPIYEGF 174 (376)
Q Consensus 145 ~a~~~~g~------~tglVVDiG~~~t~i~pv~dG~ 174 (376)
++.|..|. .+..++|+|+++|+|+=..++.
T Consensus 167 ~vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~~~~ 202 (452)
T 3zx3_A 167 TINYLLGRFKTPGGSTFGALDLGGASTQITFVPLNS 202 (452)
T ss_dssp HHHHHTTTTC---CCCCEEEEECSSEEEEEECCSSC
T ss_pred HHHhhhccccCCCCCceEEEecCCCceEEEeccCCC
Confidence 23334452 5677899999999998776654
No 52
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=84.35 E-value=2.3 Score=38.27 Aligned_cols=50 Identities=10% Similarity=-0.001 Sum_probs=37.3
Q ss_pred HHhhcccCCCceecchhhhhhhhhc-------CCceEEEEecCCCceEEEEeeCCeecc
Q psy16631 126 EIFFESFNVPALYVSMQAVLSLYAT-------GRTTGVVLDSGDGVTHAVPIYEGFAMP 177 (376)
Q Consensus 126 ~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~i~pv~dG~~~~ 177 (376)
+.+-+.|++| |.+.++.-+++++. +..+.++|-+|.+ .-..-|.||.+..
T Consensus 114 ~~l~~~~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv~~G~l~~ 170 (327)
T 2ap1_A 114 ADLSARLDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLVLNGKPIT 170 (327)
T ss_dssp HHHHHHHTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEEETTEEEC
T ss_pred HHHHHHHCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEEECCEEee
Confidence 3444456787 88999999988752 3578899999977 5566678998765
No 53
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=83.95 E-value=4.2 Score=38.22 Aligned_cols=51 Identities=14% Similarity=0.234 Sum_probs=38.0
Q ss_pred HHHhhcccCCCceecchhhhhhhhhc-------CCceEEEEecCCCceEEEEeeCCeecc
Q psy16631 125 AEIFFESFNVPALYVSMQAVLSLYAT-------GRTTGVVLDSGDGVTHAVPIYEGFAMP 177 (376)
Q Consensus 125 ~~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~i~pv~dG~~~~ 177 (376)
.+.+-+.|++| |++.+++-+++++. +..+.++|-+|.+ .-..-|.||.+..
T Consensus 201 ~~~L~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv~~G~l~~ 258 (429)
T 1z05_A 201 GPEIYKATGLP-VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHG-LGAGIVLDGRVLQ 258 (429)
T ss_dssp HHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred HHHHHHHhCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-EEEEEEECCEEee
Confidence 34444557887 88889999987763 4578999999986 5667778988765
No 54
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=83.93 E-value=7.2 Score=35.26 Aligned_cols=46 Identities=20% Similarity=0.242 Sum_probs=35.2
Q ss_pred cccCCCceecchhhhhhhhhc-------CCceEEEEecCCCceEEEEeeCCeecc
Q psy16631 130 ESFNVPALYVSMQAVLSLYAT-------GRTTGVVLDSGDGVTHAVPIYEGFAMP 177 (376)
Q Consensus 130 e~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~i~pv~dG~~~~ 177 (376)
+.|++| |++.++.-+++++. +..+.++|-+|.+ .-...+.||++..
T Consensus 129 ~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii~~G~l~~ 181 (343)
T 2yhw_A 129 DTLHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGIIHQHELIH 181 (343)
T ss_dssp HHHCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEEETTEECC
T ss_pred HHHCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEEECCEEec
Confidence 446777 78889988887753 4578999999987 5667778998765
No 55
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=82.66 E-value=7.6 Score=36.04 Aligned_cols=51 Identities=18% Similarity=0.191 Sum_probs=37.9
Q ss_pred HHHhhcccCCCceecchhhhhhhhhc-------CCceEEEEecCCCceEEEEeeCCeecc
Q psy16631 125 AEIFFESFNVPALYVSMQAVLSLYAT-------GRTTGVVLDSGDGVTHAVPIYEGFAMP 177 (376)
Q Consensus 125 ~~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~i~pv~dG~~~~ 177 (376)
.+.+-+.|++| |++.++.-+++++. +..+.++|-+|.+ .-..-|.||.+..
T Consensus 179 ~~~l~~~~~~p-v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv~~G~l~~ 236 (406)
T 1z6r_A 179 GEALEQHTGVP-VYIQHDISAWTMAEALFGASRGARDVIQVVIDHN-VGAGVITDGHLLH 236 (406)
T ss_dssp HHHHHHHHSSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEETT
T ss_pred HHHHHHHHCCC-EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCc-EEEEEEECCEEee
Confidence 33444456887 78889998887752 4578999999986 6677778998765
No 56
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=79.71 E-value=15 Score=32.22 Aligned_cols=70 Identities=13% Similarity=0.029 Sum_probs=48.0
Q ss_pred cEEEEeCCCCChHhHHHHHHHhhcccCC-Cceecchhhhhhhhh-cCCceEEEEecCCCceEEEEeeCCeecc
Q psy16631 107 PVLLTEAPLNPRRNREKAAEIFFESFNV-PALYVSMQAVLSLYA-TGRTTGVVLDSGDGVTHAVPIYEGFAMP 177 (376)
Q Consensus 107 ~vvl~~~~~~~~~~r~~~~~~lfe~~~~-~~v~~~~~~~~a~~~-~g~~tglVVDiG~~~t~i~pv~dG~~~~ 177 (376)
.+-+..|-.. +.....+.+.+-+.+++ ..+.+.++..+++++ .+..++++|=+|.+.--..-+.||++..
T Consensus 62 ~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~g~~~~v~v~~GTGigg~~i~~~G~~~~ 133 (291)
T 1zbs_A 62 AVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALCGDSEGIACILGTGSNSCLFDGREIKAN 133 (291)
T ss_dssp EEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHTTTSCEEEEEESSSEEEEEECSSSEEEE
T ss_pred EEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhcCCCCcEEEEecCChheEEECCCCcEEE
Confidence 4566556544 22233455555556775 358999999999998 4778899988988875555567998753
No 57
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=63.26 E-value=4.4 Score=37.11 Aligned_cols=36 Identities=19% Similarity=0.162 Sum_probs=25.8
Q ss_pred ceEEEEecCCCceEEEEeeC--CeeccccceeecccHH
Q psy16631 153 TTGVVLDSGDGVTHAVPIYE--GFAMPHSIMRNDIAGR 188 (376)
Q Consensus 153 ~tglVVDiG~~~t~i~pv~d--G~~~~~~~~~~~~GG~ 188 (376)
.+.+|+|||+++|.|+-..+ +.+.......+++||.
T Consensus 140 ~t~~v~DiGGGStei~~~~~~~~~~~~~~~~sl~lG~~ 177 (353)
T 3aap_A 140 KSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYGQ 177 (353)
T ss_dssp SCEEEEEECSSEEEEEEECCCCTTSCGGGEEEEEETTE
T ss_pred ccEEEEEeCCCceEEEEecCCccccCCCceEEEEECCc
Confidence 47999999999999997754 3444333456778773
No 58
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=59.85 E-value=16 Score=32.12 Aligned_cols=55 Identities=11% Similarity=0.087 Sum_probs=39.9
Q ss_pred HHHHHhhcccCC-Cceecchhhhhhhhhc-CCceEEEEecCCCceEEEEeeCCeecc
Q psy16631 123 KAAEIFFESFNV-PALYVSMQAVLSLYAT-GRTTGVVLDSGDGVTHAVPIYEGFAMP 177 (376)
Q Consensus 123 ~~~~~lfe~~~~-~~v~~~~~~~~a~~~~-g~~tglVVDiG~~~t~i~pv~dG~~~~ 177 (376)
.+.+.+=+.++. ..+.+.++..+++++. +..++++|=+|.+..-..-+.||++..
T Consensus 75 ~l~~~l~~~~~~~~pv~v~NDa~~aalge~g~~~~v~v~~GTGi~g~gi~~~G~~~~ 131 (291)
T 1zxo_A 75 VLRRAIADSLPVIGNIKANSDMLAAAHGLCGQKAGIACILGTGSNSCFYNGKEIVSN 131 (291)
T ss_dssp HHHHHHHHHSCCCSCCEEECSHHHHHHHTTTTSCBEEEEESSSEEEEEECSSSEEEE
T ss_pred HHHHHHHHhcCCCceEEEECcHHHHHHhhcCCCCcEEEEeCCChheEEECCCCcEEE
Confidence 444555556775 3488999999999965 678888888988874455567888754
No 59
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=58.79 E-value=9.1 Score=34.03 Aligned_cols=67 Identities=21% Similarity=0.124 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhCCHHHHHHhhcCeEeccCcccccCHHHHHHHHHHhhCCCC---------ceEEEeCCCCCccchhhhHH
Q psy16631 275 IHDVLYYAIQKSDLDLRKVLYQNIVLSGGSTLFKGFGDRLLAEIRKNAPKD---------LKIRISAPQERLYSTWIGGS 345 (376)
Q Consensus 275 l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~Gl~~rl~~eL~~~~~~~---------~~i~v~~~~~~~~~~w~Gas 345 (376)
|...|...+.-++++ .|||.||.+..+-|-+++++.+.+..... .+..|..+.-.+.+..+||+
T Consensus 212 La~~i~nl~~~ldPe-------~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa 284 (302)
T 3epq_A 212 IAQALAQYILILAPX-------XIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTL 284 (302)
T ss_dssp HHHHHHHHHHHTCCS-------CEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHH
T ss_pred HHHHHHHHHHHHCch-------hhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHH
Confidence 556666666666654 78999998877668888888887764321 12345555555668889998
Q ss_pred Hhh
Q psy16631 346 ILA 348 (376)
Q Consensus 346 i~a 348 (376)
.++
T Consensus 285 ~l~ 287 (302)
T 3epq_A 285 VLA 287 (302)
T ss_dssp HHH
T ss_pred HHH
Confidence 876
No 60
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=52.83 E-value=68 Score=27.87 Aligned_cols=55 Identities=22% Similarity=0.265 Sum_probs=36.7
Q ss_pred cEEEEeCCCCChHhHHHHHHHhhcccCCCceecchhhhhhhhhc-CCceEEEEecCCC
Q psy16631 107 PVLLTEAPLNPRRNREKAAEIFFESFNVPALYVSMQAVLSLYAT-GRTTGVVLDSGDG 163 (376)
Q Consensus 107 ~vvl~~~~~~~~~~r~~~~~~lfe~~~~~~v~~~~~~~~a~~~~-g~~tglVVDiG~~ 163 (376)
.+-+..|-..+......+.+.+=+ ++.| +.+.++.-+++++. ...++++|-+|.+
T Consensus 62 ~igi~~~G~~~~~~~~~l~~~l~~-~~~p-v~v~ND~~aaa~~e~~~~~~v~l~~GTG 117 (299)
T 2e2o_A 62 VVGMGVAGLDSKFDWENFTPLASL-IAPK-VIIQHDGVIALFAETLGEPGVVVIAGTG 117 (299)
T ss_dssp EEEEEETTCCSHHHHHHHHHHHTT-SSSE-EEEEEHHHHHHHHHHTTSCEEEEEESSS
T ss_pred EEEEEcCCCCchhHHHHHHHHHHh-CCCC-EEEeCcHHHHHhhccCCCCeEEEEecCC
Confidence 566666655333333345555544 7765 77888888888875 3578899999988
No 61
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=52.10 E-value=93 Score=28.35 Aligned_cols=50 Identities=14% Similarity=0.054 Sum_probs=35.7
Q ss_pred cCeEeccCcccccC-HHHHHHHHHHhhCCCCceEEEeCCCCCccchhhhHHHhhc
Q psy16631 296 QNIVLSGGSTLFKG-FGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILAS 349 (376)
Q Consensus 296 ~nIvl~GG~s~i~G-l~~rl~~eL~~~~~~~~~i~v~~~~~~~~~~w~Gasi~a~ 349 (376)
+.|||+||.+...- |.+++++.+.... ++.|........+...||+.++.
T Consensus 297 ~~IvlgGgi~~~~~~l~~~i~~~l~~~~----~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 297 DFIVLTGGLAHEKEFLVPWITKRVSFIA----PVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp SEEEEEEGGGGCTTTHHHHHHHHHTTTS----CEEEEEBCCHHHHHHHHHHHHHT
T ss_pred CEEEEeCcCccChHHHHHHHHHHHHhhc----CeEEEecCcchhHHHHHHHHHHc
Confidence 36999999987655 8899998887653 45665544444577889887764
No 62
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=42.42 E-value=19 Score=33.05 Aligned_cols=54 Identities=24% Similarity=0.180 Sum_probs=36.6
Q ss_pred HHHHHhhcccCCCceecchhhh---------hhhh-----------------------hcCC--c--eEEEEecCCCceE
Q psy16631 123 KAAEIFFESFNVPALYVSMQAV---------LSLY-----------------------ATGR--T--TGVVLDSGDGVTH 166 (376)
Q Consensus 123 ~~~~~lfe~~~~~~v~~~~~~~---------~a~~-----------------------~~g~--~--tglVVDiG~~~t~ 166 (376)
.+.+.+-+.+++|.+ +.+++- ++++ +.++ . +.+++.+|.+ +.
T Consensus 111 ~l~~~l~~~~~~Pv~-v~NDan~~~~~~~a~aaalp~~~r~~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtG-iG 188 (381)
T 1saz_A 111 IIAHRFSSETGVPAY-VVDPVVVDEMEDVARVSGHPNYQRKSIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGG-IS 188 (381)
T ss_dssp HHHHHHHHHHCCCEE-EESCTTBCCCCGGGTBCSSTTCBCCCCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSS-EE
T ss_pred HHHHHHHHhcCCCEE-EeCCCccccCcHHHHHcCCcchhhhcccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCC-cE
Confidence 445556677888854 666665 4433 3333 4 8999999986 57
Q ss_pred EEEeeCCeeccc
Q psy16631 167 AVPIYEGFAMPH 178 (376)
Q Consensus 167 i~pv~dG~~~~~ 178 (376)
...|.||+++..
T Consensus 189 ~g~i~~G~~~~G 200 (381)
T 1saz_A 189 IAAHRKGRVIDV 200 (381)
T ss_dssp EEEEETTEEEEE
T ss_pred EEEEECCEEEEe
Confidence 777889988754
No 63
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=42.07 E-value=23 Score=31.46 Aligned_cols=59 Identities=20% Similarity=0.263 Sum_probs=38.6
Q ss_pred CeEeccCcccccC-HHHHHHHHHHhhCCC---CceEEEeCCCCCccchhhhHHHhhccccccc
Q psy16631 297 NIVLSGGSTLFKG-FGDRLLAEIRKNAPK---DLKIRISAPQERLYSTWIGGSILASLDTFKR 355 (376)
Q Consensus 297 nIvl~GG~s~i~G-l~~rl~~eL~~~~~~---~~~i~v~~~~~~~~~~w~Gasi~a~l~~~~~ 355 (376)
.|||-||.+..+. +.++|.+.+++.... ..+++|....-...+..+||+.++--..|.+
T Consensus 242 ~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~~~~~~ 304 (310)
T 3htv_A 242 AVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQRFLPQ 304 (310)
T ss_dssp EEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHHHHCC-
T ss_pred EEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHHHhhcc
Confidence 5788888887654 467888888776531 1245666555556788999998875444443
No 64
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=40.12 E-value=11 Score=33.06 Aligned_cols=45 Identities=24% Similarity=0.158 Sum_probs=28.7
Q ss_pred CeEeccCcccccCHHHHHHHHHHhhCCCCceEEEeCCCCCccchhhhHHHhhc
Q psy16631 297 NIVLSGGSTLFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILAS 349 (376)
Q Consensus 297 nIvl~GG~s~i~Gl~~rl~~eL~~~~~~~~~i~v~~~~~~~~~~w~Gasi~a~ 349 (376)
.|+|.||.+..+-|.+++++.+.+. ++.. +. ...++..||+.++.
T Consensus 242 ~IvlgGgv~~~~~~~~~l~~~~~~~-----~i~~--~~-~~~~~~~GAa~la~ 286 (299)
T 2e2o_A 242 KVYLKGGMFRSNIYHKFFTLYLEKE-----GIIS--DL-GKRSPEIGAVILAY 286 (299)
T ss_dssp EEEEESGGGGSHHHHHHHHHHHHHT-----TCEE--EC-CSCCHHHHHHHHHH
T ss_pred EEEEECCccCcHHHHHHHHHHCCCC-----eEec--cC-CCCChHHHHHHHHH
Confidence 5888888776555666666666553 2222 22 34567889988773
No 65
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=38.29 E-value=28 Score=32.92 Aligned_cols=52 Identities=13% Similarity=0.177 Sum_probs=39.9
Q ss_pred CeEeccCcccccCHHHHHHHHHHhhCCC------CceEEEeCCCCCccchhhhHHHhhccc
Q psy16631 297 NIVLSGGSTLFKGFGDRLLAEIRKNAPK------DLKIRISAPQERLYSTWIGGSILASLD 351 (376)
Q Consensus 297 nIvl~GG~s~i~Gl~~rl~~eL~~~~~~------~~~i~v~~~~~~~~~~w~Gasi~a~l~ 351 (376)
.|.+-||....|+|.+++++.|..+... ..++.+....| .+=+||+++|.+.
T Consensus 386 ~V~vdGsv~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~d---gsg~GAAl~aa~~ 443 (457)
T 2yhx_A 386 HIAAXGSXRSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAID---GXGAASXVIXSIA 443 (457)
T ss_dssp EEEEESTTTTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECCC---TTTHHHHHHHHHH
T ss_pred EEEEECCcccCchHHHHHHHHHHHhhCcccccccCcceEEEECCC---chhhhHHHHHHHH
Confidence 4777888877899999999999988653 33677766544 4789999988764
No 66
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=33.65 E-value=14 Score=33.78 Aligned_cols=46 Identities=22% Similarity=0.197 Sum_probs=31.4
Q ss_pred ccCCCceecchhhhhhhhh----------------c--------------C----CceEEEEecCCCceEEEEeeCCeec
Q psy16631 131 SFNVPALYVSMQAVLSLYA----------------T--------------G----RTTGVVLDSGDGVTHAVPIYEGFAM 176 (376)
Q Consensus 131 ~~~~~~v~~~~~~~~a~~~----------------~--------------g----~~tglVVDiG~~~t~i~pv~dG~~~ 176 (376)
.|++..|.+.++.-+++++ . | ..+.++|-+|.+ .-..-|.+|++.
T Consensus 126 ~~~~~pv~v~NDa~aaalge~~l~~~~~~~~~~~E~~~~~~~~~~~~~~~g~~~~~~~~~~v~~GTG-iG~gii~~g~l~ 204 (373)
T 2q2r_A 126 LFPPGHSAILNDLEAGGFGVLAVSDAHVFSEYFGVMWEGTQWRTCEQEPAGSVIGRGRCLVLAPGTG-LGSSLIYYNPPM 204 (373)
T ss_dssp TSCTTSEEEEEHHHHHHHHHHHHHHTTCHHHHEEEEECCTTTTTTCSSCTTSSCCSSCEEEEEESSS-EEEEEEEECC--
T ss_pred hcCCCCEEEEccHhHHhccccccChhhhccccchhhcccccccccccCCCcCcCCCCCEEEEEeCCc-eeEEEEecCccc
Confidence 3777458889999998888 2 3 267899999877 445556677654
Q ss_pred c
Q psy16631 177 P 177 (376)
Q Consensus 177 ~ 177 (376)
.
T Consensus 205 ~ 205 (373)
T 2q2r_A 205 N 205 (373)
T ss_dssp -
T ss_pred C
Confidence 4
No 67
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=33.06 E-value=31 Score=32.58 Aligned_cols=22 Identities=18% Similarity=-0.052 Sum_probs=18.7
Q ss_pred ceEEEEecCCCceEEEEeeCCe
Q psy16631 153 TTGVVLDSGDGVTHAVPIYEGF 174 (376)
Q Consensus 153 ~tglVVDiG~~~t~i~pv~dG~ 174 (376)
.+..|+|+|+++|.|+-..+..
T Consensus 190 ~t~gvlDlGGgStqi~~~~~~~ 211 (456)
T 3cj1_A 190 GTLGAMDLGGASTQITFETTSP 211 (456)
T ss_dssp CCCEEEEECSSEEEEEEECCSC
T ss_pred CceEEEEcCCCceEEEeccCCc
Confidence 4679999999999999886664
No 68
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=31.21 E-value=37 Score=30.53 Aligned_cols=27 Identities=22% Similarity=0.394 Sum_probs=23.6
Q ss_pred hcCeEeccCcccccCHHHHHHHHHHhh
Q psy16631 295 YQNIVLSGGSTLFKGFGDRLLAEIRKN 321 (376)
Q Consensus 295 ~~nIvl~GG~s~i~Gl~~rl~~eL~~~ 321 (376)
.++|+|+||.+.-..+.++|.+++...
T Consensus 250 ~~~vvlsGGVa~N~~L~~~L~~~l~~~ 276 (334)
T 3eno_A 250 KDEILMAGGVALNRRLRDMVTNMAREA 276 (334)
T ss_dssp CSEEEEESSGGGCHHHHHHHHHHHHHH
T ss_pred CCeEEEcCCHHHHHHHHHHHHHHHHHc
Confidence 468999999999999999999998653
No 69
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=30.77 E-value=46 Score=31.40 Aligned_cols=51 Identities=16% Similarity=0.214 Sum_probs=36.4
Q ss_pred eEeccCcc-cccCHHHHHHHHHHhhCCCCceEEEeCCCCCccchhhhHHHhhccc
Q psy16631 298 IVLSGGST-LFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASLD 351 (376)
Q Consensus 298 Ivl~GG~s-~i~Gl~~rl~~eL~~~~~~~~~i~v~~~~~~~~~~w~Gasi~a~l~ 351 (376)
|.+.||.. .-|.|.+++++.+.+++....++.+.. ...++.+||+++|...
T Consensus 396 V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~l---~~dgs~iGAAllA~~~ 447 (451)
T 1bdg_A 396 VGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLRL---SEDGSGKGAAAIAASC 447 (451)
T ss_dssp EEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEEE---CTTHHHHHHHHHHTTC
T ss_pred EEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEEE---CCCccHHHHHHHHHHH
Confidence 33445543 588999999999998864455666663 3457899999988654
No 70
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=28.23 E-value=32 Score=35.72 Aligned_cols=50 Identities=12% Similarity=0.242 Sum_probs=38.4
Q ss_pred CeEeccCcccc-cCHHHHHHHHHHhhCCCCceEEEeCCCCCccchhhhHHHhhcc
Q psy16631 297 NIVLSGGSTLF-KGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASL 350 (376)
Q Consensus 297 nIvl~GG~s~i-~Gl~~rl~~eL~~~~~~~~~i~v~~~~~~~~~~w~Gasi~a~l 350 (376)
.|++-||.+.- |.|.+++++.+.++.+. .++++... ..++-+||+++|.+
T Consensus 409 ~IvigGgV~~~~~~~~~~l~~~l~~~~~~-~~~~i~~a---~dgs~~GAA~laa~ 459 (917)
T 1cza_N 409 TVGVDGSLYKTHPQYSRRFHKTLRRLVPD-SDVRFLLS---ESGSGKGAAMVTAV 459 (917)
T ss_dssp EEEEECHHHHHCSSHHHHHHHHHHHHCTT-EEEEEEEC---TTCHHHHHHHHHHH
T ss_pred EEEECCchhhccHHHHHHHHHHHHHhcCC-CceEEEEe---ccchHHHHHHHHHh
Confidence 46667777665 99999999999998743 56777664 45688999998866
No 71
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=28.09 E-value=18 Score=33.10 Aligned_cols=23 Identities=17% Similarity=0.416 Sum_probs=20.7
Q ss_pred cCeEeccCcccccCHHHHHHHHH
Q psy16631 296 QNIVLSGGSTLFKGFGDRLLAEI 318 (376)
Q Consensus 296 ~nIvl~GG~s~i~Gl~~rl~~eL 318 (376)
..|++|||++.-|-|.+||++.|
T Consensus 285 ~~v~vcGGGa~N~~Lm~~L~~~l 307 (371)
T 3qbx_A 285 EEVLVCGGGAFNTALMKRLAMLM 307 (371)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHC
T ss_pred ceEEEECCccCcHHHHHHHHHhC
Confidence 46999999999999999998776
No 72
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=27.32 E-value=52 Score=29.43 Aligned_cols=27 Identities=19% Similarity=0.238 Sum_probs=23.6
Q ss_pred hcCeEeccCcccccCHHHHHHHHHHhh
Q psy16631 295 YQNIVLSGGSTLFKGFGDRLLAEIRKN 321 (376)
Q Consensus 295 ~~nIvl~GG~s~i~Gl~~rl~~eL~~~ 321 (376)
.++|+|+||.++-..+.++|.+.+...
T Consensus 245 ~~~vvlsGGVa~N~~l~~~l~~~l~~~ 271 (330)
T 2ivn_A 245 KDEVVLVGGVAANNRLREMLRIMTEDR 271 (330)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHH
T ss_pred CCeEEEEccHHHHHHHHHHHHHHHHHc
Confidence 468999999999999999999988643
No 73
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=26.49 E-value=51 Score=31.25 Aligned_cols=47 Identities=17% Similarity=0.181 Sum_probs=31.9
Q ss_pred cCeEeccCcccccCHHHHHHHHHHhhCCCCceEEEeCCCCCccchhhhHHHhhcc
Q psy16631 296 QNIVLSGGSTLFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASL 350 (376)
Q Consensus 296 ~nIvl~GG~s~i~Gl~~rl~~eL~~~~~~~~~i~v~~~~~~~~~~w~Gasi~a~l 350 (376)
+.|+++||+|+-+-+.+.+.+-+ +.++.+.. ....++-+||+++|..
T Consensus 388 ~~i~~~GG~a~s~~~~Qi~Adv~------g~pV~~~~--~~e~~~alGAA~lA~~ 434 (484)
T 2itm_A 388 QSVTLIGGGARSEYWRQMLADIS------GQQLDYRT--GGDVGPALGAARLAQI 434 (484)
T ss_dssp SCEEEESGGGCCHHHHHHHHHHH------CCCEEEES--CTTSCHHHHHHHHHHH
T ss_pred ceEEEEeccccCHHHHHHHHHHh------CCeEEeCC--CCCcccHHHHHHHHHH
Confidence 56999999998777766666555 23444433 3333478899998854
No 74
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=26.12 E-value=1.2e+02 Score=26.12 Aligned_cols=49 Identities=12% Similarity=0.055 Sum_probs=33.8
Q ss_pred EEEEecCCCceEEEEeeCCeeccccceee-cccHHHHHHHHHHHHHhcCC
Q psy16631 155 GVVLDSGDGVTHAVPIYEGFAMPHSIMRN-DIAGRDVTRYLKLLLRKEGV 203 (376)
Q Consensus 155 glVVDiG~~~t~i~pv~dG~~~~~~~~~~-~~GG~~l~~~l~~~l~~~~~ 203 (376)
-|+||+|.+.+.+..+-++..+....... ....+.+...+..++...+.
T Consensus 4 lL~IDIGNT~iK~gl~d~~~l~~~~r~~T~~~t~de~~~~l~~ll~~~~~ 53 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGDEIKLRFRHTSKVSTSDELGIFLKSVLRENNC 53 (266)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEECSCCCHHHHHHHHHHHHHTTTC
T ss_pred EEEEEECCCeEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHcCC
Confidence 38999999999999888877665432211 24466666677777776553
No 75
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=25.60 E-value=87 Score=29.71 Aligned_cols=47 Identities=21% Similarity=0.233 Sum_probs=32.5
Q ss_pred hcCeEeccCcccccCHHHHHHHHHHhhCCCCceEEEeCCCCCccchhhhHHHhhcc
Q psy16631 295 YQNIVLSGGSTLFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASL 350 (376)
Q Consensus 295 ~~nIvl~GG~s~i~Gl~~rl~~eL~~~~~~~~~i~v~~~~~~~~~~w~Gasi~a~l 350 (376)
.+.|+++||+|+=+-+.+.+..-+ +.++.+....+ ++-+||+++|..
T Consensus 394 ~~~i~~~GG~a~s~~~~Qi~Adv~------g~pV~~~~~~e---~~alGaA~lA~~ 440 (497)
T 2zf5_O 394 IKELRVDGGATANDFLMQFQADIL------NRKVIRPVVKE---TTALGAAYLAGL 440 (497)
T ss_dssp CCCEEEESGGGGCHHHHHHHHHHH------TSCEEEESCSC---HHHHHHHHHHHH
T ss_pred cceEEEeCccccCHHHHHHHHhhc------CCeEEEcCCCc---chHHHHHHHHHH
Confidence 367999999998777776666555 23555444322 678899998854
No 76
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=25.46 E-value=23 Score=32.44 Aligned_cols=23 Identities=22% Similarity=0.377 Sum_probs=20.5
Q ss_pred cCeEeccCcccccCHHHHHHHHH
Q psy16631 296 QNIVLSGGSTLFKGFGDRLLAEI 318 (376)
Q Consensus 296 ~nIvl~GG~s~i~Gl~~rl~~eL 318 (376)
..|++|||++.-|-|-+||++.|
T Consensus 291 ~~v~vcGGGa~N~~Lm~~L~~~l 313 (370)
T 3cqy_A 291 GELFVCGGGAFNAELMQRLAALL 313 (370)
T ss_dssp EEEEEESGGGGCHHHHHHHHHHC
T ss_pred CEEEEECCCcCCHHHHHHHHHhC
Confidence 36999999999999999998776
No 77
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=23.88 E-value=61 Score=32.00 Aligned_cols=45 Identities=13% Similarity=0.186 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhhcCccCCCCCCCCcEEEEeCCCCChHhHHHHHHHhhcccCC
Q psy16631 83 WNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLNPRRNREKAAEIFFESFNV 134 (376)
Q Consensus 83 ~~~~~~~l~~~~~~~~l~~~~~~~~vvl~~~~~~~~~~r~~~~~~lfe~~~~ 134 (376)
-+.++.|-+|+|. .+++||||+...+++..+..++++++-+.||=
T Consensus 235 ~~v~~~I~~~AF~-------~s~yPvilslE~Hc~~~qQ~~ma~~~~~~~gd 279 (624)
T 1djx_A 235 CDVLRAIRDYAFK-------ASPYPVILSLENHCSLEQQRVMARHLRAILGP 279 (624)
T ss_dssp HHHHHHHHHHTTT-------SCSSCEEEEEEEECCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHhccc-------CCCCCEEEEecccCCHHHHHHHHHHHHHHHhh
Confidence 3667777788874 36999999988999999999999998888773
No 78
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=23.77 E-value=99 Score=29.37 Aligned_cols=46 Identities=33% Similarity=0.328 Sum_probs=32.4
Q ss_pred cCeEeccCcccccCHHHHHHHHHHhhCCCCceEEEeCCCCCccchhhhHHHhhcc
Q psy16631 296 QNIVLSGGSTLFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASL 350 (376)
Q Consensus 296 ~nIvl~GG~s~i~Gl~~rl~~eL~~~~~~~~~i~v~~~~~~~~~~w~Gasi~a~l 350 (376)
+.|+++||+|+-+-+.+.+..-+ +.++.+....+ ++-.||+++|..
T Consensus 409 ~~i~~~GG~a~s~~~~Q~~Adv~------g~pV~~~~~~e---~~alGaA~la~~ 454 (503)
T 2w40_A 409 HVLRCDGGMTKNKPFMQFNSDII------NTKIEVSKYKE---VTSLGAAVLAGL 454 (503)
T ss_dssp SCEEEESGGGGCHHHHHHHHHHH------TSCEEEESCSC---HHHHHHHHHHHH
T ss_pred ceEEEeCccccCHHHHHHHHHHH------CCeEEecCCCc---chHHHHHHHHHH
Confidence 67999999998877776666555 23555544322 678899998854
No 79
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=23.37 E-value=60 Score=30.86 Aligned_cols=46 Identities=15% Similarity=0.248 Sum_probs=32.5
Q ss_pred cCeEeccCcccccCHHHHHHHHHHhhCCCCceEEEeCCCCCccchhhhHHHhhcc
Q psy16631 296 QNIVLSGGSTLFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASL 350 (376)
Q Consensus 296 ~nIvl~GG~s~i~Gl~~rl~~eL~~~~~~~~~i~v~~~~~~~~~~w~Gasi~a~l 350 (376)
+.|+++||+|+-+-+.+.+.+-+ +.++.+....+ ++-+||+++|..
T Consensus 400 ~~i~~~GG~a~n~~~~q~~Adv~------g~pV~~~~~~e---~~alGaA~la~~ 445 (495)
T 2dpn_A 400 KVLKADGGMAQNRLFLKIQADLL------GVPVAVPEVTE---TTALGAALMAGV 445 (495)
T ss_dssp CCEEEESGGGGCHHHHHHHHHHH------TSCEEEESCSC---HHHHHHHHHHHH
T ss_pred cEEEEecccccCHHHHHHHHHHh------CCeeEecCCcc---cHHHHHHHHHHh
Confidence 56999999998887777666655 33555544322 678899998854
No 80
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=23.04 E-value=41 Score=32.20 Aligned_cols=47 Identities=13% Similarity=0.222 Sum_probs=31.2
Q ss_pred hcCeEeccCcccccCHHHHHHHHHHhhCCCCceEEE-eCCCCCccchhhhHHHhhcc
Q psy16631 295 YQNIVLSGGSTLFKGFGDRLLAEIRKNAPKDLKIRI-SAPQERLYSTWIGGSILASL 350 (376)
Q Consensus 295 ~~nIvl~GG~s~i~Gl~~rl~~eL~~~~~~~~~i~v-~~~~~~~~~~w~Gasi~a~l 350 (376)
.+.|+++||+|+=+-+.+.+..-+ + ..| ..+. ..-++-.||+++|..
T Consensus 403 ~~~i~~~GGga~s~~~~Qi~ADv~------g--~pV~~~~~-~~e~~alGaA~lA~~ 450 (511)
T 3hz6_A 403 VGLLKVVGGGARSEAWLRMIADNL------N--VSLLVKPD-AHLHPLRGLAALAAV 450 (511)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHH------T--CEEEECCC-GGGHHHHHHHHHHHH
T ss_pred CCEEEEeCchhcCHHHHHHHHHHH------C--CeeEEecC-CCCchHHHHHHHHHH
Confidence 567999999998776655555444 2 234 3322 344678999998864
No 81
>2jsh_A Appetite-regulating hormone, obestatin; micellar solution, DPC, SDS, alternative splicing, amidation, lipoprotein, secreted; NMR {Synthetic} PDB: 2jsj_A
Probab=22.54 E-value=15 Score=19.41 Aligned_cols=14 Identities=14% Similarity=0.473 Sum_probs=11.0
Q ss_pred cceeHHHHhhcCch
Q psy16631 356 MWVSKREFDEDGKR 369 (376)
Q Consensus 356 ~~itk~ey~e~G~~ 369 (376)
.-+|-++|+|||..
T Consensus 9 i~ls~~~y~~yG~~ 22 (26)
T 2jsh_A 9 IKLSGAQYQQHGRA 22 (26)
T ss_dssp GGGHHHHCSCSSSC
T ss_pred eEecHHHHHHHhHH
Confidence 45788999999963
No 82
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=21.70 E-value=1.2e+02 Score=29.08 Aligned_cols=47 Identities=21% Similarity=0.127 Sum_probs=32.0
Q ss_pred hcCeEeccCcccccCHHHHHHHHHHhhCCCCceEEEeCCCCCccchhhhHHHhhcc
Q psy16631 295 YQNIVLSGGSTLFKGFGDRLLAEIRKNAPKDLKIRISAPQERLYSTWIGGSILASL 350 (376)
Q Consensus 295 ~~nIvl~GG~s~i~Gl~~rl~~eL~~~~~~~~~i~v~~~~~~~~~~w~Gasi~a~l 350 (376)
.+.|+++||+|+=+-+.+.+..-+ +.+|.+....+ ++-+||+++|..
T Consensus 426 ~~~i~~~GGgaks~~~~Qi~ADvl------g~pV~~~~~~e---~~alGAA~lA~~ 472 (520)
T 4e1j_A 426 DTVLRVDGGMVASDWTMQRLSDLL------DAPVDRPVILE---TTALGVAWLAGS 472 (520)
T ss_dssp -CCEEEESGGGGCHHHHHHHHHHH------TSCEEEESCCC---HHHHHHHHHHHH
T ss_pred cceEEEeCccccCHHHHHHHHHHh------CCeEEecCCCc---cHHHHHHHHHHH
Confidence 577999999998777766665555 33555544322 577899998864
No 83
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=21.04 E-value=2.1e+02 Score=27.19 Aligned_cols=82 Identities=16% Similarity=0.255 Sum_probs=0.0
Q ss_pred CChHhHHHHHHHhhccc------CCCceecchhhhhhhhhcCCceE--EEEecCCCceEEEEe-eCCe----------ec
Q psy16631 116 NPRRNREKAAEIFFESF------NVPALYVSMQAVLSLYATGRTTG--VVLDSGDGVTHAVPI-YEGF----------AM 176 (376)
Q Consensus 116 ~~~~~r~~~~~~lfe~~------~~~~v~~~~~~~~a~~~~g~~tg--lVVDiG~~~t~i~pv-~dG~----------~~ 176 (376)
.+.....++++.+.+++ .-.++.+.|+.+..+ ..|..+| |.+|+|+++.+|.-| .+|. .+
T Consensus 36 ~~~~~L~~i~~~f~~em~~GL~~~~~~~~MlPt~V~~l-P~G~E~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~~~~~~I 114 (485)
T 3o8m_A 36 VSSEKMRSIVKHFISELDKGLSKKGGNIPMIPGWVVEY-PTGKETGDFLALDLGGTNLRVVLVKLGGNHDFDTTQNKYRL 114 (485)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSSSCCSSCCEECCCCSC-CCSCCEEEEEEEEESSSEEEEEEEEEESSSCEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHHhccCCCCCcccCCCCCCC-CCCCcceEEEEEEecCCeEEEEEEEECCCCceEEEEEEEec
Q ss_pred cccceeecccHHHHHHHHHHHHHh
Q psy16631 177 PHSIMRNDIAGRDVTRYLKLLLRK 200 (376)
Q Consensus 177 ~~~~~~~~~GG~~l~~~l~~~l~~ 200 (376)
+.....-. |..+-.++.+.+..
T Consensus 115 p~~~~~~~--~~~lfd~Ia~~i~~ 136 (485)
T 3o8m_A 115 PDHLRTGT--SEQLWSFIAKCLKE 136 (485)
T ss_dssp CTTGGGSB--HHHHHHHHHHHHHH
T ss_pred CchhccCC--HHHHHHHHHHHHHH
No 84
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=20.69 E-value=48 Score=33.65 Aligned_cols=26 Identities=19% Similarity=0.261 Sum_probs=22.0
Q ss_pred hcCeEeccCcccccCHHHHHHHHHHh
Q psy16631 295 YQNIVLSGGSTLFKGFGDRLLAEIRK 320 (376)
Q Consensus 295 ~~nIvl~GG~s~i~Gl~~rl~~eL~~ 320 (376)
.+||+|+||.++=.-+.++|.+.|..
T Consensus 706 ~~~VvLSGGVa~N~~L~~~l~~~L~~ 731 (772)
T 4g9i_A 706 VKNVALSGGVAYNELITKMIRKVVEA 731 (772)
T ss_dssp CSCCCEESSTTCCHHHHHHHHHHGGG
T ss_pred cCEEEEEchHHHHHHHHHHHHHHHHH
Confidence 46899999999888888888888765
No 85
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=20.47 E-value=89 Score=31.84 Aligned_cols=45 Identities=20% Similarity=0.224 Sum_probs=37.2
Q ss_pred HHHHHHHHHHhhcCccCCCCCCCCcEEEEeCCCC-ChHhHHHHHHHhhcccCC
Q psy16631 83 WNDMERIWQYVYSNDQLQTFSEEHPVLLTEAPLN-PRRNREKAAEIFFESFNV 134 (376)
Q Consensus 83 ~~~~~~~l~~~~~~~~l~~~~~~~~vvl~~~~~~-~~~~r~~~~~~lfe~~~~ 134 (376)
-+.++.|-+|+|. .+++||||+...++ +..+..++++++-+.||=
T Consensus 385 ~~v~~~I~~~AF~-------~S~yPvIlslE~Hc~s~~qQ~~ma~~~~~~~Gd 430 (799)
T 2zkm_X 385 KEAIEAIAESAFK-------TSPYPIILSFENHVDSPRQQAKMAEYCRTIFGD 430 (799)
T ss_dssp HHHHHHHHHHTTS-------SCCSCEEEEEEECCCCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHhccc-------CCCCCEEEEccccCCCHHHHHHHHHHHHHHhhh
Confidence 4667778888884 37999999988888 899999999998888773
Done!