Query psy1664
Match_columns 524
No_of_seqs 409 out of 2951
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 18:13:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1664.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1664hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pbh_A Procathepsin B; thiol p 100.0 1.8E-72 6E-77 569.4 25.3 303 38-497 13-316 (317)
2 3qj3_A Cathepsin L-like protei 100.0 1E-69 3.6E-74 551.4 25.0 301 5-353 18-329 (331)
3 3tnx_A Papain; hydrolase, cyto 100.0 1.1E-69 3.7E-74 553.9 24.2 295 5-353 62-360 (363)
4 3hhi_A Cathepsin B-like cystei 100.0 6.7E-70 2.3E-74 551.5 20.2 312 31-501 6-318 (325)
5 3qt4_A Cathepsin-L-like midgut 100.0 3.5E-69 1.2E-73 546.2 23.9 299 5-353 23-327 (329)
6 1by8_A Protein (procathepsin K 100.0 1.2E-68 4E-73 540.7 23.6 299 5-353 7-312 (314)
7 2c0y_A Procathepsin S; proenzy 100.0 2E-68 6.9E-73 539.2 23.1 299 4-353 7-313 (315)
8 1pci_A Procaricain; zymogen, h 100.0 4.1E-68 1.4E-72 538.1 24.9 297 5-353 18-319 (322)
9 1cs8_A Human procathepsin L; p 100.0 4.4E-68 1.5E-72 537.0 23.6 297 5-353 8-314 (316)
10 2o6x_A Procathepsin L1, secret 100.0 3.4E-68 1.1E-72 536.5 20.9 295 7-353 3-304 (310)
11 1xkg_A DER P I, major mite fec 100.0 6.1E-66 2.1E-70 519.2 16.8 287 4-353 3-300 (312)
12 3qsd_A Cathepsin B-like peptid 100.0 3.8E-64 1.3E-68 494.9 24.1 253 96-496 2-254 (254)
13 3pdf_A Cathepsin C, dipeptidyl 100.0 2.9E-63 1E-67 519.3 24.6 297 24-500 135-440 (441)
14 3cbj_A Cathepsin B; cathepsin 100.0 6E-63 2.1E-67 489.4 23.0 255 95-498 5-260 (266)
15 3kwz_A Cathepsin K; enzyme inh 100.0 8.5E-55 2.9E-59 418.2 19.1 209 97-353 1-213 (215)
16 2xu3_A Cathepsin L1; hydrolase 100.0 1.8E-54 6.1E-59 417.1 20.2 214 97-353 1-218 (220)
17 1m6d_A Cathepsin F, catsf; pap 100.0 2.7E-54 9.2E-59 414.0 20.6 207 97-353 1-211 (214)
18 3i06_A Cruzipain; autocatalyti 100.0 4.5E-54 1.5E-58 412.8 20.0 206 97-350 1-209 (215)
19 1ppo_A Protease omega; hydrola 100.0 6.8E-54 2.3E-58 411.6 20.6 209 97-353 1-213 (216)
20 8pch_A Cathepsin H; hydrolase, 100.0 2.6E-54 8.9E-59 416.2 17.2 209 97-353 1-216 (220)
21 3u8e_A Papain-like cysteine pr 100.0 3.7E-54 1.3E-58 415.4 17.4 209 97-353 1-217 (222)
22 3ovx_A Cathepsin S; hydrolase, 100.0 7E-54 2.4E-58 412.7 18.8 210 97-353 2-216 (218)
23 2b1m_A SPE31; papain-like, sug 100.0 1.1E-53 3.6E-58 417.7 20.3 213 96-353 1-222 (246)
24 1cqd_A Protein (protease II); 100.0 1.4E-53 4.9E-58 410.8 20.8 209 96-353 2-215 (221)
25 3p5u_A Actinidin; SAD, cystein 100.0 5.7E-54 2E-58 413.6 18.0 210 97-353 1-215 (220)
26 1iwd_A Ervatamin B; cysteine p 100.0 2.1E-53 7E-58 407.8 21.6 207 97-353 1-212 (215)
27 1yal_A Chymopapain; hydrolase, 100.0 1.4E-53 4.7E-58 410.1 20.0 209 97-353 1-213 (218)
28 3ioq_A CMS1MS2; caricaceae, cy 100.0 1.2E-53 4.2E-58 409.1 18.8 206 97-353 1-209 (213)
29 2fo5_A Cysteine proteinase EP- 100.0 1.1E-53 3.8E-58 420.0 17.3 216 95-353 2-222 (262)
30 3f5v_A DER P 1 allergen; aller 100.0 2.1E-53 7.1E-58 410.4 18.1 207 95-352 8-219 (222)
31 1deu_A Procathepsin X; cystein 100.0 4.5E-53 1.5E-57 420.2 20.8 233 94-497 33-277 (277)
32 1s4v_A Cysteine endopeptidase; 100.0 3.3E-53 1.1E-57 410.3 19.1 212 96-353 1-217 (229)
33 2cio_A Papain; hydrolase/inhib 100.0 1.6E-52 5.6E-57 400.9 22.1 205 97-353 1-209 (212)
34 2oul_A Falcipain 2; cysteine p 100.0 6.7E-53 2.3E-57 411.3 19.2 215 95-353 16-238 (241)
35 3bwk_A Cysteine protease falci 100.0 7.7E-53 2.6E-57 411.3 18.8 215 95-353 18-240 (243)
36 1o0e_A Ervatamin C; plant cyst 100.0 3.3E-52 1.1E-56 397.4 21.8 202 97-353 1-205 (208)
37 2bdz_A Mexicain; cysteine prot 100.0 2.9E-52 9.9E-57 399.6 21.4 205 97-353 1-209 (214)
38 3f75_A Toxopain-2, cathepsin L 100.0 1.5E-52 5.3E-57 405.1 16.6 213 95-353 5-222 (224)
39 3ois_A Cysteine protease; alph 100.0 3.9E-48 1.3E-52 388.0 11.4 250 51-340 13-274 (291)
40 2wbf_X Serine-repeat antigen p 100.0 8.5E-47 2.9E-51 373.9 18.8 229 99-347 9-250 (265)
41 2cb5_A Protein (bleomycin hydr 100.0 1.4E-36 4.9E-41 315.3 17.8 223 96-338 47-412 (453)
42 2e01_A Cysteine proteinase 1; 100.0 5.7E-36 1.9E-40 311.2 17.5 224 96-338 52-413 (457)
43 3pw3_A Aminopeptidase C; bleom 100.0 8.2E-32 2.8E-36 274.1 11.4 76 113-190 22-108 (383)
44 3pbh_A Procathepsin B; thiol p 100.0 1.5E-28 5.1E-33 248.1 11.6 131 210-350 179-309 (317)
45 3i06_A Cruzipain; autocatalyti 100.0 3.8E-28 1.3E-32 232.5 13.4 101 384-493 112-212 (215)
46 8pch_A Cathepsin H; hydrolase, 99.9 3.2E-28 1.1E-32 234.0 11.8 105 385-496 111-219 (220)
47 1m6d_A Cathepsin F, catsf; pap 99.9 4.3E-28 1.5E-32 232.0 12.2 104 383-494 106-212 (214)
48 3qsd_A Cathepsin B-like peptid 99.9 1E-27 3.5E-32 235.3 13.4 131 210-349 117-247 (254)
49 3cbj_A Cathepsin B; cathepsin 99.9 1.3E-27 4.5E-32 236.0 12.9 121 221-350 132-252 (266)
50 3qt4_A Cathepsin-L-like midgut 99.9 1E-27 3.5E-32 242.5 12.3 103 386-497 224-329 (329)
51 2xu3_A Cathepsin L1; hydrolase 99.9 1.6E-27 5.5E-32 229.0 11.7 103 385-496 110-219 (220)
52 2o6x_A Procathepsin L1, secret 99.9 2.6E-27 9E-32 238.3 13.4 105 384-497 199-306 (310)
53 3kwz_A Cathepsin K; enzyme inh 99.9 1.4E-27 4.9E-32 228.7 10.5 102 386-496 109-214 (215)
54 3ovx_A Cathepsin S; hydrolase, 99.9 2.2E-27 7.7E-32 227.8 11.1 102 387-497 114-218 (218)
55 1xkg_A DER P I, major mite fec 99.9 2.4E-27 8.3E-32 238.2 10.2 107 385-499 194-306 (312)
56 2c0y_A Procathepsin S; proenzy 99.9 3.2E-27 1.1E-31 238.2 10.7 102 386-496 210-314 (315)
57 1by8_A Protein (procathepsin K 99.9 3.5E-27 1.2E-31 237.8 10.8 102 386-496 208-313 (314)
58 1iwd_A Ervatamin B; cysteine p 99.9 1.1E-26 3.7E-31 222.2 13.4 101 386-497 108-214 (215)
59 3qj3_A Cathepsin L-like protei 99.9 4.7E-27 1.6E-31 238.2 11.3 103 386-497 226-331 (331)
60 1cs8_A Human procathepsin L; p 99.9 3.8E-27 1.3E-31 237.7 10.4 104 385-496 206-315 (316)
61 3u8e_A Papain-like cysteine pr 99.9 1.3E-26 4.6E-31 222.8 12.8 105 385-498 107-220 (222)
62 1ppo_A Protease omega; hydrola 99.9 1.4E-26 4.7E-31 221.7 12.7 101 386-497 109-215 (216)
63 3hhi_A Cathepsin B-like cystei 99.9 6.5E-27 2.2E-31 236.6 10.8 96 245-350 212-307 (325)
64 2b1m_A SPE31; papain-like, sug 99.9 3.2E-26 1.1E-30 223.3 13.7 101 388-498 115-225 (246)
65 1yal_A Chymopapain; hydrolase, 99.9 2.1E-26 7.3E-31 220.7 12.2 102 386-498 109-216 (218)
66 3p5u_A Actinidin; SAD, cystein 99.9 2.5E-26 8.4E-31 220.7 12.2 102 386-498 112-218 (220)
67 1cqd_A Protein (protease II); 99.9 3.2E-26 1.1E-30 220.0 12.8 102 386-498 111-218 (221)
68 1pci_A Procaricain; zymogen, h 99.9 3E-26 1E-30 231.6 12.5 101 386-497 215-321 (322)
69 3f5v_A DER P 1 allergen; aller 99.9 2.2E-26 7.5E-31 221.4 10.0 99 386-491 115-218 (222)
70 3ioq_A CMS1MS2; caricaceae, cy 99.9 6.4E-26 2.2E-30 216.7 11.7 99 385-497 108-211 (213)
71 2cio_A Papain; hydrolase/inhib 99.9 1.9E-25 6.6E-30 213.2 13.9 97 386-497 109-211 (212)
72 1s4v_A Cysteine endopeptidase; 99.9 1.1E-25 3.6E-30 217.4 12.0 103 386-498 112-220 (229)
73 3f75_A Toxopain-2, cathepsin L 99.9 6.6E-26 2.3E-30 218.5 10.4 101 387-496 118-223 (224)
74 2fo5_A Cysteine proteinase EP- 99.9 1.1E-25 3.7E-30 221.0 11.4 103 386-498 117-225 (262)
75 1o0e_A Ervatamin C; plant cyst 99.9 2.9E-25 1E-29 211.2 13.7 97 386-497 107-207 (208)
76 2oul_A Falcipain 2; cysteine p 99.9 1.2E-25 4.1E-30 218.7 10.9 103 386-492 127-237 (241)
77 3bwk_A Cysteine protease falci 99.9 1.7E-25 5.6E-30 218.0 11.0 103 386-492 129-239 (243)
78 2bdz_A Mexicain; cysteine prot 99.9 3.6E-25 1.2E-29 211.5 12.9 97 387-498 110-212 (214)
79 3tnx_A Papain; hydrolase, cyto 99.9 1.6E-24 5.4E-29 221.0 12.7 94 389-496 263-361 (363)
80 1deu_A Procathepsin X; cystein 99.9 6.2E-25 2.1E-29 217.8 8.5 84 250-340 171-254 (277)
81 2wbf_X Serine-repeat antigen p 99.9 2.6E-24 8.8E-29 212.6 10.7 102 394-498 157-261 (265)
82 3pdf_A Cathepsin C, dipeptidyl 99.9 9.6E-24 3.3E-28 220.7 9.7 94 250-350 331-430 (441)
83 3ois_A Cysteine protease; alph 99.8 9.1E-22 3.1E-26 196.7 7.9 88 384-480 181-272 (291)
84 2e01_A Cysteine proteinase 1; 99.7 1.9E-17 6.4E-22 172.3 9.6 88 386-480 302-413 (457)
85 2cb5_A Protein (bleomycin hydr 99.7 3.3E-17 1.1E-21 170.2 9.0 87 387-480 299-412 (453)
86 2l95_A Crammer, LP06209P; cyst 99.4 1E-13 3.5E-18 110.5 5.5 73 1-74 2-76 (80)
87 3f75_P Toxopain-2, cathepsin L 99.4 3.4E-13 1.2E-17 112.6 4.6 67 4-72 20-86 (106)
88 3pw3_A Aminopeptidase C; bleom 99.3 4.2E-12 1.4E-16 129.3 8.5 87 387-480 222-356 (383)
89 1pxv_A Cysteine protease; hydr 97.1 0.0059 2E-07 54.3 11.9 127 118-336 26-160 (183)
90 1cv8_A Staphopain; cysteine pr 96.7 0.03 1E-06 49.7 13.4 120 118-324 17-144 (174)
91 1x9y_A Cysteine proteinase; ha 96.4 0.023 7.9E-07 55.8 11.6 120 117-324 201-329 (367)
92 1pxv_A Cysteine protease; hydr 76.2 6.3 0.00021 35.0 6.8 67 391-480 96-162 (183)
93 3erv_A Putative C39-like pepti 75.5 5.4 0.00019 37.5 6.8 50 250-303 130-187 (236)
94 1x9y_A Cysteine proteinase; ha 73.0 9.2 0.00032 37.6 7.8 65 391-479 272-337 (367)
95 1cv8_A Staphopain; cysteine pr 69.7 11 0.00036 33.5 6.7 56 392-465 88-143 (174)
96 3bb7_A Interpain A; cysteine p 53.8 22 0.00076 34.9 6.6 60 253-337 239-298 (321)
97 1dki_A Pyrogenic exotoxin B zy 52.2 26 0.00089 35.2 6.9 55 253-337 290-344 (371)
98 4d8b_A Streptopain; papain fol 51.4 26 0.0009 33.3 6.5 55 253-338 172-227 (261)
99 3erv_A Putative C39-like pepti 47.6 54 0.0018 30.6 7.9 54 388-445 125-187 (236)
100 3bb7_A Interpain A; cysteine p 24.8 1.3E+02 0.0045 29.3 6.8 60 395-479 239-298 (321)
101 1dki_A Pyrogenic exotoxin B zy 24.0 1.6E+02 0.0056 29.3 7.4 55 395-479 290-344 (371)
No 1
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=1.8e-72 Score=569.40 Aligned_cols=303 Identities=48% Similarity=1.015 Sum_probs=257.1
Q ss_pred hhhhhhhcCCCCccccccccccccchHHHHHHHhCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCCCCCCCCccCC
Q psy1664 38 DRVDHSILLPKLPFYGAEKNALSKLTLSELEMRMGVHPDSKLPQNRLPLLVQLSDPLEELPEGFDARINWPYCPTIQEIR 117 (524)
Q Consensus 38 ~~I~~~N~~~~~~~~~~g~N~fsd~t~eE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~~~~~~g~vtpvk 117 (524)
++|++||+++ .+|++++| |++++.||+++++|.++... . .+.... .....+||++||||++||+|+.|+|||
T Consensus 13 ~~i~~~N~~~--~~~~~~~n-f~~~~~e~~~~~lg~~~~~~--~--~~~~~~-~~~~~~lP~s~DwR~~~~~c~~vtpVk 84 (317)
T 3pbh_A 13 ELVNYVNKRN--TTWQAGHN-FYNVDMSYLKRLCGTFLGGP--K--PPQRVM-FTEDLKLPASFDAREQWPQCPTIKEIR 84 (317)
T ss_dssp HHHHHHHHHT--CSEEECCC-CSSCCHHHHHHTCCBCTTCC--C--CSEEEC-CCSCCCCCSSEEHHHHCTTCGGGTCCC
T ss_pred HHHHHHHCCC--CCeEEeec-cccCCHHHHHHHcCCCCCcc--c--cCcccc-cccccCCCCCEechhccCCCCCcCCcc
Confidence 4499999876 79999999 99999999999988764432 1 111111 112357999999999999999999999
Q ss_pred CCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcC-CCCCCCCCCChHHHHHHHHHhCCccCCccCCCCCcc
Q psy1664 118 DQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCK-DCGNGCQGGFHGKAWKYWVTTGIVSGGTYASKQGCR 196 (524)
Q Consensus 118 dQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~-~~~~gC~GG~~~~a~~~~~~~Gi~~e~~y~~~e~c~ 196 (524)
|||.||||||||++++||++++|+++++..+.||+|+|+||+. ..+.||+||++..||+|++++||++|++|.+.++|+
T Consensus 85 dQg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~Gi~te~~Y~~~~~c~ 164 (317)
T 3pbh_A 85 DQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHVGCR 164 (317)
T ss_dssp BCCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHTCEEBBCSTTCCCBSS
T ss_pred ccCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHhCCCcchhccCCCCCc
Confidence 9999999999999999999999998765579999999999986 456899999999999999999999999999999999
Q ss_pred ccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecCCCHHHHHHHHHHcCCeEEEEEeccccc
Q psy1664 197 PYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPANEETIMREIFRHGPVEGSMTIYADMI 276 (524)
Q Consensus 197 PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~GPV~v~i~v~~~f~ 276 (524)
||... .|.
T Consensus 165 PY~~~----------~c~-------------------------------------------------------------- 172 (317)
T 3pbh_A 165 PYSIP----------PCE-------------------------------------------------------------- 172 (317)
T ss_dssp CCCSC----------CCC--------------------------------------------------------------
T ss_pred CcccC----------ccc--------------------------------------------------------------
Confidence 99754 110
Q ss_pred ccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCccccccccCccCCcCcCCcCCCCCC
Q psy1664 277 LYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLFRIGCRPYEIPCERYMNGSRSSCQ 356 (524)
Q Consensus 277 ~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy~ri~~~~~~~~c~~~~~~~~~~C~ 356 (524)
....+..+.|.
T Consensus 173 ---------------------------------------------------------------------~~~~~~~~~C~ 183 (317)
T 3pbh_A 173 ---------------------------------------------------------------------HHVNGSRPPCT 183 (317)
T ss_dssp ---------------------------------------------------------------------CCCTTCCSCCC
T ss_pred ---------------------------------------------------------------------ccccCcCCCCC
Confidence 00011122444
Q ss_pred CCCCCCcccccccccCccccccCcceeeeEEEEcCCCHHHHHHHHHhCCCEEEEEecccccccccccEEeCCCCCCccCe
Q psy1664 357 ANEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPANEETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGGPLGEH 436 (524)
Q Consensus 357 ~~~~~~p~C~~~C~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~gPv~~~~~~~~~f~~y~~gi~~~~~~~~~~~H 436 (524)
. ...++.|...|..++...|..++++....|.++.++++||.+|+++|||+|+|+|+++|++|++|||.++++...++|
T Consensus 184 ~-~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~~~e~~i~~~i~~~GPV~v~i~~~~~f~~Y~~GVy~~~~~~~~~~H 262 (317)
T 3pbh_A 184 G-EGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGH 262 (317)
T ss_dssp S-CCCCCCCCCSCCSSCCSCGGGSEECBCCCEEECSCHHHHHHHHHHHCCEEEEEEEEGGGGGEEEEEECCCSCCEEEEE
T ss_pred C-cCCCCcccccccCCCccceeeeeeeeeecccCCcHHHHHHHHHHHCCCEEEEEEecccccCCCCcEEccCCCCCCCCE
Confidence 3 245677888898888877888888888888888899999999999999999999998999999999998876666799
Q ss_pred eEEEeeecCCCCCCCccCCccEEEEEcCCCCCCCCCcEEEEEeCCCccCccccceecccee
Q psy1664 437 AIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLFRIVRGQNECGIEADITAGLPKI 497 (524)
Q Consensus 437 ~v~ivG~g~~~~~~~~~~~~~ywiv~NSWG~~WG~~Gy~~i~~g~~~cgi~~~~~~~~p~~ 497 (524)
||+|||||+++ +.+|||||||||++||++|||||+||.|.|||++.+++++|.+
T Consensus 263 aV~iVGyG~~~-------g~~YWivkNSWG~~WGe~GY~ri~rg~n~CgI~~~~~a~~p~~ 316 (317)
T 3pbh_A 263 AIRILGWGVEN-------GTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRT 316 (317)
T ss_dssp EEEEEEEEEET-------TEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEECCBCC
T ss_pred EEEEEEEEEeC-------CeeEEEEEcCCCCCcCCCcEEEEEcCCCcccCCCceEeeecCC
Confidence 99999999887 8999999999999999999999999999999999999999974
No 2
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=1e-69 Score=551.40 Aligned_cols=301 Identities=24% Similarity=0.401 Sum_probs=246.5
Q ss_pred HHHHHHHHHHHHccccccccccccccchhHHhhhhhhhhhcCC--CCccccccccccccchHHHHHHHhC-CCCCCCCCC
Q psy1664 5 TADAVATFLKDLDLSQSSRNHSNGVFCDLSKAFDRVDHSILLP--KLPFYGAEKNALSKLTLSELEMRMG-VHPDSKLPQ 81 (524)
Q Consensus 5 t~~~f~~f~~~~~k~y~~~~~~~~r~~~f~~nl~~I~~~N~~~--~~~~~~~g~N~fsd~t~eE~~~~~~-~~~~~~~~~ 81 (524)
..++|++|+++|+|.|.+.+|...|+.+|.+|+++|++||++. ...+|++++|+|+|||.|||++++. ........
T Consensus 18 l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~~~~~~~- 96 (331)
T 3qj3_A 18 VAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLIMPADLH- 96 (331)
T ss_dssp HHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCCCCSSTT-
T ss_pred HHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhcccccccccc-
Confidence 4578999999999999998999999999999999999999862 1379999999999999999998654 33221100
Q ss_pred CCCCcccccC-----CCCCCCCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHH
Q psy1664 82 NRLPLLVQLS-----DPLEELPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLV 156 (524)
Q Consensus 82 ~~~~~~~~~~-----~~~~~lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lv 156 (524)
......... ....+||++||||++ |+|+||||||.||||||||++++||++++|+++....+.||+|+|+
T Consensus 97 -~~~~~~~~~~~~~~~~~~~lP~s~DwR~~----g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~Lv 171 (331)
T 3qj3_A 97 -KNGIPIKTREDLGLNASVRYPASFDWRDQ----GMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQLV 171 (331)
T ss_dssp -TTCEEECSGGGGTCCSSCCCCSSEEGGGG----TCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHHHH
T ss_pred -ccCcccccccccccccccCCCcceecccC----CccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHHHHh
Confidence 000000000 022479999999999 8999999999999999999999999999999874337999999999
Q ss_pred hhcCCCCCCCCCCChHHHHHHHHHh-CCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCcccc
Q psy1664 157 SCCKDCGNGCQGGFHGKAWKYWVTT-GIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSY 235 (524)
Q Consensus 157 dC~~~~~~gC~GG~~~~a~~~~~~~-Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~ 235 (524)
||+.. +.||+||++..|++|++++ ||++|++| ||.+. .+.|........
T Consensus 172 dC~~~-~~GC~GG~~~~a~~yi~~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~~~~-------------- 221 (331)
T 3qj3_A 172 DCVPN-ALGCSGGWMNDAFTYVAQNGGIDSEGAY-------PYEMA--------DGNCHYDPNQVA-------------- 221 (331)
T ss_dssp HHCTT-SCGGGCCCHHHHHHHHHHHTCEEBTTTS-------CCCSS--------CCCCCCCTTSEE--------------
T ss_pred hhccC-CCCCCCCCHHHHHHHHHHcCCcCccccc-------CccCC--------CCCCCCCcccce--------------
Confidence 99865 7799999999999999998 99999988 99876 667865432111
Q ss_pred ccccccceeeeecC-CCHHHHHHHHHHcCCeEEEEEecccccccCCceEEcCCCC-CCCCcEEEEEEeccCCCCCCCccc
Q psy1664 236 EDDLNFGRIAYSLP-ANEETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGG-PLGEHAIRIIGWGQEPLGEGTSSV 313 (524)
Q Consensus 236 ~~~~~~~~~~~~~~-~~~~~ik~~l~~~GPV~v~i~v~~~f~~Y~sGIy~~~~~~-~~~~HaV~iVGyg~~~~~~g~~~g 313 (524)
.....| ..++ .++++||++|+++|||+|+|+++.+|++|++|||..+.|. ..++|||+|||||++ ++
T Consensus 222 ~~i~~~----~~v~~~~e~~lk~al~~~GPV~v~i~a~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-------~g 290 (331)
T 3qj3_A 222 ARLSGY----VYLSGPDENMLADMVATKGPVAVAFDADDPFGSYSGGVYYNPTCETNKFTHAVLIVGYGNE-------NG 290 (331)
T ss_dssp ECCSEE----EEESSCCHHHHHHHHHHHCCEEEEECCCTTGGGEEEEEECCTTCCSSCCCEEEEEEEEEEE-------TT
T ss_pred eEeeEE----EEeCCCCHHHHHHHHHhCCCEEEEEEcccccccccCceEeCCCCCCCcCCEEEEEEEEecc-------CC
Confidence 011111 2444 4789999999999999999999877999999999998775 578999999999976 57
Q ss_pred eeEEEEeCCCCCcccccCccccccccCccCCcCcCCcCCC
Q psy1664 314 VKYWLVANSFNTNWGENGLFRIGCRPYEIPCERYMNGSRS 353 (524)
Q Consensus 314 ~~YWivkNSWG~~WGe~Gy~ri~~~~~~~~c~~~~~~~~~ 353 (524)
++|||||||||++|||+|||||+++.. ..|++.+.+++|
T Consensus 291 ~~yWivkNSWG~~WGe~GY~~i~r~~~-n~CgI~~~~~~p 329 (331)
T 3qj3_A 291 QDYWLVKNSWGDGWGLDGYFKIARNAN-NHCGIAGVASVP 329 (331)
T ss_dssp EEEEEEECSBCTTSTBTTEEEEECSSS-SGGGTTTSCEEE
T ss_pred ceEEEEEcCCCCCcCCCCEEEEEcCCC-CccCcCCceeee
Confidence 999999999999999999999999862 369998777655
No 3
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=1.1e-69 Score=553.92 Aligned_cols=295 Identities=23% Similarity=0.357 Sum_probs=235.2
Q ss_pred HHHHHHHHHHHHccccccccccccccchhHHhhhhhhhhhcCCCCccccccccccccchHHHHHHHhCC-CCCCCCCCCC
Q psy1664 5 TADAVATFLKDLDLSQSSRNHSNGVFCDLSKAFDRVDHSILLPKLPFYGAEKNALSKLTLSELEMRMGV-HPDSKLPQNR 83 (524)
Q Consensus 5 t~~~f~~f~~~~~k~y~~~~~~~~r~~~f~~nl~~I~~~N~~~~~~~~~~g~N~fsd~t~eE~~~~~~~-~~~~~~~~~~ 83 (524)
+.+.|++|+++|+|.|.+.+|...||.+|++|+++|++||++. .+|++|+|+|+|||.+||++++.. ..... ....
T Consensus 62 ~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~--~sy~~g~N~FaDlT~eEf~~~~~~~~~~~~-~~~~ 138 (363)
T 3tnx_A 62 LIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKN--NSYWLGLNVFADMSNDEFKEKYTGSIAGNY-TTTE 138 (363)
T ss_dssp HHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTSC--CSEEECSCTTTTSCHHHHHHHHSCSSCSCC-CCSS
T ss_pred HHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcCC--CCeEEeccccccCCHHHHHHHhcccccccc-cccc
Confidence 5688999999999999999999999999999999999999987 799999999999999999986543 32211 1111
Q ss_pred CCcccccCCCCCCCCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCCC
Q psy1664 84 LPLLVQLSDPLEELPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDCG 163 (524)
Q Consensus 84 ~~~~~~~~~~~~~lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~~ 163 (524)
............+||++||||++ |.|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+.. .
T Consensus 139 ~~~~~~~~~~~~~lP~s~DWR~~----g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg--~~~~LSeQ~LvdC~~~-~ 211 (363)
T 3tnx_A 139 LSYEEVLNDGDVNIPEYVDWRQK----GAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTG--NLNEYSEQELLDCDRR-S 211 (363)
T ss_dssp SSSSCCCCCSCCCCCSCEEGGGG----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHS--CCCCBCHHHHHHHCTT-S
T ss_pred cccccccCcccCCCCcceecccC----CCCCCCccCCcCCchhhhhhcccHHHHHHHHcC--CCCCcCHHHHhcccCC-C
Confidence 11111122233579999999999 899999999999999999999999999999986 4689999999999754 6
Q ss_pred CCCCCCChHHHHHHHHHhCCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccce
Q psy1664 164 NGCQGGFHGKAWKYWVTTGIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGR 243 (524)
Q Consensus 164 ~gC~GG~~~~a~~~~~~~Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (524)
.||+||++..|++|++++|+++|+.| ||.+. .+.|........ .. ....
T Consensus 212 ~GC~GG~~~~a~~yi~~~Gi~~e~~y-------PY~~~--------~~~c~~~~~~~~--------~~-----~~~~--- 260 (363)
T 3tnx_A 212 YGCNGGYPWSALQLVAQYGIHYRNTY-------PYEGV--------QRYCRSREKGPY--------AA-----KTDG--- 260 (363)
T ss_dssp CTTBCCCHHHHHHHHHHTCBCBTTTS-------CCCSS--------CCCCCGGGGCSC--------SB-----CCCE---
T ss_pred CCCCCCChHHHHhHHHhcCccccccC-------CCcCc--------CCCcccCCCCCc--------ee-----eccc---
Confidence 79999999999999999999998888 99875 444542211100 00 0001
Q ss_pred eeeecCCCHHHHHHHHHHcCCeEEEEEec-ccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCC
Q psy1664 244 IAYSLPANEETIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANS 322 (524)
Q Consensus 244 ~~~~~~~~~~~ik~~l~~~GPV~v~i~v~-~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNS 322 (524)
...++...+.++++++.+|||+|+|++. ++|++|++|||..++ ...++|||+|||||+ +|||||||
T Consensus 261 -~~~~~~~~e~~l~~~v~~gPvsvai~a~~~~F~~Y~sGVy~~~~-~~~lnHaV~iVGyG~-----------~YWIVKNS 327 (363)
T 3tnx_A 261 -VRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPC-GNKVDHAVAAVGYGP-----------NYILIRNS 327 (363)
T ss_dssp -EEEECSSCHHHHHHHHTTSCEEEEECCCSHHHHTEEEEEECCCC-CSCCCEEEEEEEEET-----------TEEEEECS
T ss_pred -eEEcchhhHHHHHHHHHcCCcEEEEEecchhhhCCCCCEECCCC-CCCCCeEEEEEEcCC-----------CcEEEEeC
Confidence 1233444455566666789999999865 789999999998874 456799999999995 49999999
Q ss_pred CCCcccccCccccccccCc--cCCcCcCCcCCC
Q psy1664 323 FNTNWGENGLFRIGCRPYE--IPCERYMNGSRS 353 (524)
Q Consensus 323 WG~~WGe~Gy~ri~~~~~~--~~c~~~~~~~~~ 353 (524)
||++|||+|||||+|+... ..||+.+.+++|
T Consensus 328 WGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~yP 360 (363)
T 3tnx_A 328 WGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYP 360 (363)
T ss_dssp BCTTSTBTTEEEEECCSCCSSCGGGTTSCEEEE
T ss_pred CCCccccCcEEEEEcCCCCCCCcCCccceeeec
Confidence 9999999999999998654 469998877665
No 4
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=6.7e-70 Score=551.49 Aligned_cols=312 Identities=36% Similarity=0.689 Sum_probs=202.6
Q ss_pred chhHHhhhhhhhhhcCCCCcccccccc-ccccchHHHHHHHhCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCCCC
Q psy1664 31 CDLSKAFDRVDHSILLPKLPFYGAEKN-ALSKLTLSELEMRMGVHPDSKLPQNRLPLLVQLSDPLEELPEGFDARINWPY 109 (524)
Q Consensus 31 ~~f~~nl~~I~~~N~~~~~~~~~~g~N-~fsd~t~eE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~~~~~ 109 (524)
....-+.++|++||++++ .+|++++| +|+|||.+||+++++..+....................+||++||||++||+
T Consensus 6 ~a~~~~~~~i~~~N~~~~-~~~~~~~n~~f~dlt~eE~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~~w~~ 84 (325)
T 3hhi_A 6 DAPVLSKAFVDRVNRLNR-GIWKAKYDGVMQNITLREAKRLNGVIKKNNNASILPKRRFTEEEARAPLPSSFDSAEAWPN 84 (325)
T ss_dssp ---------------------------------------------------CCSCBCCCCHHHHHCCCCSCEEHHHHSTT
T ss_pred ccccccHHHHHHHHhCCC-CceEEecccccccCCHHHHHHHhCCCCCCcccccccCccccccccccCCCCcEehhHhcCC
Confidence 334445556999998764 78999999 8999999999998876432210000000000000112479999999999999
Q ss_pred CCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHHHHHHHHhCCccCCcc
Q psy1664 110 CPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKAWKYWVTTGIVSGGTY 189 (524)
Q Consensus 110 ~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a~~~~~~~Gi~~e~~y 189 (524)
|+.|+||||||.||||||||++++||++++|+++. ..+.||+|+|+||+..++.||+||++..||+|++++|+++|+.|
T Consensus 85 ~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~~~-~~~~LSeQ~LvdC~~~~~~GC~GG~~~~A~~yi~~~Gi~~e~~y 163 (325)
T 3hhi_A 85 CPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGV-QDVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSSTGLVSDYCQ 163 (325)
T ss_dssp CTTTTCCCBCCSSBCHHHHHHHHHHHHHHHHTSSC-SSCCBCHHHHHHHCGGGBCTTBCBCHHHHHHHHHHTCBCBTTTS
T ss_pred CCccccccCCCCccccHHHHHHHHHHHHHHHHhCC-CccccCHHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCCccccc
Confidence 99999999999999999999999999999999863 36899999999998755689999999999999999999998777
Q ss_pred CCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecCCCHHHHHHHHHHcCCeEEEE
Q psy1664 190 ASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPANEETIMREIFRHGPVEGSM 269 (524)
Q Consensus 190 ~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~GPV~v~i 269 (524)
||... .|.....
T Consensus 164 -------PY~~~----------~c~~~~~--------------------------------------------------- 175 (325)
T 3hhi_A 164 -------PYPFP----------HCSHHSK--------------------------------------------------- 175 (325)
T ss_dssp -------CCSSC----------CCBSSSC---------------------------------------------------
T ss_pred -------CCccc----------ccccccc---------------------------------------------------
Confidence 99732 1210000
Q ss_pred EecccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCccccccccCccCCcCcCC
Q psy1664 270 TIYADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLFRIGCRPYEIPCERYMN 349 (524)
Q Consensus 270 ~v~~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy~ri~~~~~~~~c~~~~~ 349 (524)
+ +
T Consensus 176 ----------------------------------~----------------------~---------------------- 177 (325)
T 3hhi_A 176 ----------------------------------S----------------------K---------------------- 177 (325)
T ss_dssp ----------------------------------C----------------------T----------------------
T ss_pred ----------------------------------c----------------------c----------------------
Confidence 0 0
Q ss_pred cCCCCCCCCCCCCcccccccccCccccccCcceeeeEEEEcCCCHHHHHHHHHhCCCEEEEEecccccccccccEEeCCC
Q psy1664 350 GSRSSCQANEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPANEETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVA 429 (524)
Q Consensus 350 ~~~~~C~~~~~~~p~C~~~C~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~gPv~~~~~~~~~f~~y~~gi~~~~~ 429 (524)
+..+.|.......+.|...|... .+..++++....|.+ .++++||++|+++|||+|+|+|+++|++|++|||..++
T Consensus 178 ~~~~~C~~~~~~~~~c~~~c~~~---~~~~~~~~~~~~y~v-~~~~~i~~~i~~~GPV~v~i~~~~~f~~Y~~GVy~~~~ 253 (325)
T 3hhi_A 178 NGYPPCSQFNFDTPKCDYTCDDP---TIPVVNYRSWTSYAL-QGEDDYMRELFFRGPFEVAFDVYEDFIAYNSGVYHHVS 253 (325)
T ss_dssp TCCCBGGGCCCCCCCCCSSCSST---TSCCCCBCEEEEEEE-CSHHHHHHHHHHHCCEEEEEEEEHHHHTCCSSEECCCS
T ss_pred ccCCCCCCcccCCcchhhccccc---ccccceEEeecceEe-CCHHHHHHHHHHCCCEEEEEEeccccccccCceecCCC
Confidence 00012221122345566666522 233445555566666 89999999999999999999998899999999998877
Q ss_pred CCCccCeeEEEeeecCCCCCCCccCCccEEEEEcCCCCCCCCCcEEEEEeCCCccCccccceeccceecccc
Q psy1664 430 GGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLFRIVRGQNECGIEADITAGLPKIGLEI 501 (524)
Q Consensus 430 ~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~NSWG~~WG~~Gy~~i~~g~~~cgi~~~~~~~~p~~~~~~ 501 (524)
+...++|||+|||||+++ |.+|||||||||++||++|||||+||.|.|||++.+++++|.+...+
T Consensus 254 ~~~~~~HaV~iVGyG~~~-------g~~YWivkNSWG~~WGe~GY~~i~rg~n~CGI~~~~~~g~p~~~~~~ 318 (325)
T 3hhi_A 254 GQYLGGHAVRLVGWGTSN-------GVPYWKIANSWNTEWGMDGYFLIRRGSSECGIEDGGSAGIPLAPNTA 318 (325)
T ss_dssp CCEEEEEEEEEEEEEEET-------TEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSCEEEEEEC-----
T ss_pred CCCCCCEEEEEEEEEecC-------CceEEEEEeCCCCCcccCCEEEEEcCCCeecCccceEEeecCCCCcc
Confidence 666679999999999876 89999999999999999999999999999999999999999987544
No 5
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=3.5e-69 Score=546.16 Aligned_cols=299 Identities=22% Similarity=0.398 Sum_probs=243.6
Q ss_pred HHHHHHHHHHHHccccccccccccccchhHHhhhhhhhhhcCC--CCccccccccccccchHHHHHHHhCCCCCCCCCCC
Q psy1664 5 TADAVATFLKDLDLSQSSRNHSNGVFCDLSKAFDRVDHSILLP--KLPFYGAEKNALSKLTLSELEMRMGVHPDSKLPQN 82 (524)
Q Consensus 5 t~~~f~~f~~~~~k~y~~~~~~~~r~~~f~~nl~~I~~~N~~~--~~~~~~~g~N~fsd~t~eE~~~~~~~~~~~~~~~~ 82 (524)
..++|++|+++|+|.|.+.+|...|+.+|.+|+++|++||++. ...+|++++|+|+|||.|||+++++.+.... +..
T Consensus 23 ~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~g~~~~~~-~~~ 101 (329)
T 3qt4_A 23 FQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLAYVNRGKAQK-PKH 101 (329)
T ss_dssp HHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHHHHHHTCCC-----
T ss_pred HHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHHhcCCccccc-ccc
Confidence 4568999999999999998899999999999999999999852 2379999999999999999999766442211 110
Q ss_pred CC-CcccccCCCCCCCCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCC
Q psy1664 83 RL-PLLVQLSDPLEELPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKD 161 (524)
Q Consensus 83 ~~-~~~~~~~~~~~~lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~ 161 (524)
.. ........ ..+||++||||++ +|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+..
T Consensus 102 ~~~~~~~~~~~-~~~lP~~~DwR~~-----~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g--~~~~LSeQ~LvdC~~~ 173 (329)
T 3qt4_A 102 PENLRMPYVSS-KKPLAASVDWRSN-----AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRG--RLTSLSEQNLIDCSSS 173 (329)
T ss_dssp --CCEEECCCC-CSCCCSCEECTTT-----SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHS--CCCCBCHHHHHHHCGG
T ss_pred cccccccccCC-ccCCCCCEEcccc-----ccCCCccCCCCcChHHHHHHHHHHHHHHHHcC--CcccCCHHHHHHhccc
Confidence 00 00001111 1479999999987 59999999999999999999999999999986 4799999999999864
Q ss_pred C-CCCCCCCChHHHHHHHHHhCCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccc
Q psy1664 162 C-GNGCQGGFHGKAWKYWVTTGIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLN 240 (524)
Q Consensus 162 ~-~~gC~GG~~~~a~~~~~~~Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (524)
+ +.||+||++..|++|++++||++|++| ||.+. .+.|....... . .....
T Consensus 174 ~g~~GC~GG~~~~a~~yi~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~~~---------~-----~~i~~ 224 (329)
T 3qt4_A 174 YGNAGCDGGWMDSAFSYIHDYGIMSESAY-------PYEAQ--------GDYCRFDSSQS---------V-----TTLSG 224 (329)
T ss_dssp GTCCTTBCCCHHHHHHHHHHSCBCBTTTS-------CCCSS--------CCCCCCCGGGC---------C-----BCCSE
T ss_pred cCCCCCCCCChhHHHHHHHHcCCCcHHHe-------eeecC--------CCCCCCCcccc---------e-----EEece
Confidence 3 469999999999999999999999999 99876 56776532110 0 11111
Q ss_pred cceeeeecC-CCHHHHHHHHHHcCCeEEEEEecccccccCCceEEcCCCC-CCCCcEEEEEEeccCCCCCCCccceeEEE
Q psy1664 241 FGRIAYSLP-ANEETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGG-PLGEHAIRIIGWGQEPLGEGTSSVVKYWL 318 (524)
Q Consensus 241 ~~~~~~~~~-~~~~~ik~~l~~~GPV~v~i~v~~~f~~Y~sGIy~~~~~~-~~~~HaV~iVGyg~~~~~~g~~~g~~YWi 318 (524)
...++ .++++||++|+++|||+|+|+++.+|++|++|||..+.|. ..++|||+|||||++ ++++|||
T Consensus 225 ----~~~v~~~~e~~lk~al~~~GPV~v~i~a~~~f~~Y~~GVy~~~~c~~~~~~HaV~iVGyg~~-------~g~~yWi 293 (329)
T 3qt4_A 225 ----YYDLPSGDENSLADAVGQAGPVAVAIDATDELQFYSGGLFYDQTCNQSDLNHGVLVVGYGSD-------NGQDYWI 293 (329)
T ss_dssp ----EEECCTTCHHHHHHHHHHTCCEEEEECCCGGGTTEEEEEECCSSCCSSCCCEEEEEEEEEEE-------TTEEEEE
T ss_pred ----EEEecCCCHHHHHHHHHhCCCEEEEEecChhhhhccCceeecCCCCCCcCCEEEEEEEEEee-------CCccEEE
Confidence 23455 4789999999999999999999999999999999998885 578999999999986 4799999
Q ss_pred EeCCCCCcccccCccccccccCccCCcCcCCcCCC
Q psy1664 319 VANSFNTNWGENGLFRIGCRPYEIPCERYMNGSRS 353 (524)
Q Consensus 319 vkNSWG~~WGe~Gy~ri~~~~~~~~c~~~~~~~~~ 353 (524)
||||||++|||+|||||+++.. ..|++.+.+++|
T Consensus 294 vkNSWG~~WGe~GY~~i~r~~~-n~CgI~~~~~yp 327 (329)
T 3qt4_A 294 LKNSWGSGWGESGYWRQVRNYG-NNCGIATAASYP 327 (329)
T ss_dssp EECSBCTTSTBTTEEEEESSSS-SGGGTTTTCEEE
T ss_pred EEeCCCCcccCCcEEEEEeCCC-CccCCCCceeEe
Confidence 9999999999999999999862 369998776655
No 6
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=1.2e-68 Score=540.72 Aligned_cols=299 Identities=23% Similarity=0.382 Sum_probs=241.8
Q ss_pred HHHHHHHHHHHHccccccccccccccchhHHhhhhhhhhhcCC--CCccccccccccccchHHHHHHHh-CCCCCCCCCC
Q psy1664 5 TADAVATFLKDLDLSQSSRNHSNGVFCDLSKAFDRVDHSILLP--KLPFYGAEKNALSKLTLSELEMRM-GVHPDSKLPQ 81 (524)
Q Consensus 5 t~~~f~~f~~~~~k~y~~~~~~~~r~~~f~~nl~~I~~~N~~~--~~~~~~~g~N~fsd~t~eE~~~~~-~~~~~~~~~~ 81 (524)
..++|++|+++|+|.|.+.+|...|+.+|.+|+++|++||++. ...+|++++|+|+|||.+||++++ +...... .
T Consensus 7 ~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~--~ 84 (314)
T 1by8_A 7 LDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLS--H 84 (314)
T ss_dssp HHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHHSCCCCCCSC--C
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHHhccCCCCcc--c
Confidence 4678999999999999998999999999999999999999863 126899999999999999998754 4432211 0
Q ss_pred CCCCcccccCCCCCCCCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCC
Q psy1664 82 NRLPLLVQLSDPLEELPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKD 161 (524)
Q Consensus 82 ~~~~~~~~~~~~~~~lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~ 161 (524)
...............||++||||++ |+|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+.
T Consensus 85 ~~~~~~~~~~~~~~~lP~~~DwR~~----g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g--~~~~LSeq~lvdC~~- 157 (314)
T 1by8_A 85 SRSNDTLYIPEWEGRAPDSVDYRKK----GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTG--KLLNLSPQNLVDCVS- 157 (314)
T ss_dssp CCSSSSSBCCCCSSCCCSCCBSTTT----TCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHS--CCCCBCHHHHHTTCT-
T ss_pred ccCCccccccccccCCCCeEeCCCC----CCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcC--CCcccCHHHHHHhcC-
Confidence 0000000111111239999999998 899999999999999999999999999999985 579999999999975
Q ss_pred CCCCCCCCChHHHHHHHHH-hCCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccc
Q psy1664 162 CGNGCQGGFHGKAWKYWVT-TGIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLN 240 (524)
Q Consensus 162 ~~~gC~GG~~~~a~~~~~~-~Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (524)
.+.||+||++..||+|+++ .|+++|++| ||.+. .+.|...... .. .....
T Consensus 158 ~~~gC~GG~~~~a~~yi~~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~~---------~~-----~~i~~ 208 (314)
T 1by8_A 158 ENDGCGGGYMTNAFQYVQKNRGIDSEDAY-------PYVGQ--------EESCMYNPTG---------KA-----AKCRG 208 (314)
T ss_dssp TSCGGGCCCSHHHHHHHHHTTCBCBTTTS-------CCCSS--------CCCCCCCGGG---------CC-----BCCSC
T ss_pred CCCCCcCCCHHHHHHHHHHcCCcCcHhhC-------CCCCC--------CCCcCCCCcc---------ce-----eEECc
Confidence 5679999999999999984 699999888 99876 6678643211 00 01111
Q ss_pred cceeeeecC-CCHHHHHHHHHHcCCeEEEEEec-ccccccCCceEEcCCCCC-CCCcEEEEEEeccCCCCCCCccceeEE
Q psy1664 241 FGRIAYSLP-ANEETIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGP-LGEHAIRIIGWGQEPLGEGTSSVVKYW 317 (524)
Q Consensus 241 ~~~~~~~~~-~~~~~ik~~l~~~GPV~v~i~v~-~~f~~Y~sGIy~~~~~~~-~~~HaV~iVGyg~~~~~~g~~~g~~YW 317 (524)
.+.++ .++++||++|+++|||+|+|+++ ++|++|++|||..+.|.. .++|||+|||||++ ++++||
T Consensus 209 ----~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-------~g~~yW 277 (314)
T 1by8_A 209 ----YREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ-------KGNKHW 277 (314)
T ss_dssp ----EEECCSSCHHHHHHHHHHHCCEEEEECCCSHHHHTEEEECBCCTTCCSSCCCEEEEEEEEEEE-------TTEEEE
T ss_pred ----EEEecCCCHHHHHHHHHHcCCEEEEEEeChHHhhhccCceecCCCCCCCCCCeEEEEEEEecc-------CCceEE
Confidence 23455 47899999999999999999998 689999999999886665 78999999999986 478999
Q ss_pred EEeCCCCCcccccCccccccccCccCCcCcCCcCCC
Q psy1664 318 LVANSFNTNWGENGLFRIGCRPYEIPCERYMNGSRS 353 (524)
Q Consensus 318 ivkNSWG~~WGe~Gy~ri~~~~~~~~c~~~~~~~~~ 353 (524)
|||||||++|||+|||||+++.. ..|++.+.+++|
T Consensus 278 ivkNSWG~~WGe~GY~~i~r~~~-n~CgI~~~~~~p 312 (314)
T 1by8_A 278 IIKNSWGENWGNKGYILMARNKN-NACGIANLASFP 312 (314)
T ss_dssp EEECSBTTTSTBTTEEEECCSSS-CGGGTTSSCEEE
T ss_pred EEEcCCCCCcCcCCEEEEEcCCC-CcCCccCeeEEe
Confidence 99999999999999999999742 269998766555
No 7
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=2e-68 Score=539.25 Aligned_cols=299 Identities=25% Similarity=0.414 Sum_probs=241.9
Q ss_pred cHHHHHHHHHHHHccccccccccccccchhHHhhhhhhhhhcCC--CCccccccccccccchHHHHHHHh-CCCCCCCCC
Q psy1664 4 STADAVATFLKDLDLSQSSRNHSNGVFCDLSKAFDRVDHSILLP--KLPFYGAEKNALSKLTLSELEMRM-GVHPDSKLP 80 (524)
Q Consensus 4 st~~~f~~f~~~~~k~y~~~~~~~~r~~~f~~nl~~I~~~N~~~--~~~~~~~g~N~fsd~t~eE~~~~~-~~~~~~~~~ 80 (524)
...++|++|+++|+|.|.+.+|...|+.+|.+|+++|++||++. ...+|++++|+|+|||.+||++++ +......
T Consensus 7 ~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~~g~~~~~~-- 84 (315)
T 2c0y_A 7 TLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQ-- 84 (315)
T ss_dssp GGHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTTSBCCCCG--
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHhcCCCCCcc--
Confidence 35678999999999999988999999999999999999999863 136899999999999999997754 4332211
Q ss_pred CCCCCcccccCCCCCCCCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhc-
Q psy1664 81 QNRLPLLVQLSDPLEELPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCC- 159 (524)
Q Consensus 81 ~~~~~~~~~~~~~~~~lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~- 159 (524)
.. ..... ......+||++||||++ |+|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+
T Consensus 85 ~~-~~~~~-~~~~~~~lP~~~DwR~~----g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g--~~~~LSeq~lvdC~~ 156 (315)
T 2c0y_A 85 WQ-RNITY-KSNPNRILPDSVDWREK----GCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTG--KLVSLSAQNLVDCST 156 (315)
T ss_dssp GG-SCBCC-------CCCSCEETTTT----TCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHS--CCCCBCHHHHHHHSC
T ss_pred cc-CCccc-cCcccCCCCCeEecCCC----CCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhC--CCcCcCHHHHHhhcc
Confidence 00 00000 11112369999999998 899999999999999999999999999999985 57999999999998
Q ss_pred CC-CCCCCCCCChHHHHHHHHH-hCCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCcccccc
Q psy1664 160 KD-CGNGCQGGFHGKAWKYWVT-TGIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYED 237 (524)
Q Consensus 160 ~~-~~~gC~GG~~~~a~~~~~~-~Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~ 237 (524)
.. .+.||+||++..||+|+++ .|+++|++| ||.+. .+.|...... . ...
T Consensus 157 ~~~~~~gC~GG~~~~a~~yi~~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~~---~-----------~~~ 207 (315)
T 2c0y_A 157 EKYGNKGCNGGFMTTAFQYIIDNKGIDSDASY-------PYKAM--------DQKCQYDSKY---R-----------AAT 207 (315)
T ss_dssp GGGTCCGGGCBCHHHHHHHHHHHTCEEBTTTS-------CCCSS--------CCCCCCCGGG---E-----------EEC
T ss_pred cccCCCCCCCCCHHHHHHHHHHhCCcCchhcC-------CCccC--------CCCcccCCcc---c-----------ccc
Confidence 43 3679999999999999985 699999888 99876 6678643210 0 001
Q ss_pred ccccceeeeecC-CCHHHHHHHHHHcCCeEEEEEec-ccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCcccee
Q psy1664 238 DLNFGRIAYSLP-ANEETIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVK 315 (524)
Q Consensus 238 ~~~~~~~~~~~~-~~~~~ik~~l~~~GPV~v~i~v~-~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~ 315 (524)
... .+.++ .++++||++|+++|||+|+|+++ ++|++|++|||..+.|...++|||+|||||++ ++++
T Consensus 208 i~~----~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~c~~~~~HaV~iVGyg~~-------~g~~ 276 (315)
T 2c0y_A 208 CSK----YTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDL-------NGKE 276 (315)
T ss_dssp CCE----EEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTEEEEEECCTTCCSCCCEEEEEEEEEEE-------TTEE
T ss_pred cCC----eEEeCCCCHHHHHHHHHHcCCEEEEEecCchhhhccCCCcccCCCCCCcCCEEEEEEEEeec-------CCCc
Confidence 111 23455 47899999999999999999998 69999999999988777788999999999986 4789
Q ss_pred EEEEeCCCCCcccccCccccccccCccCCcCcCCcCCC
Q psy1664 316 YWLVANSFNTNWGENGLFRIGCRPYEIPCERYMNGSRS 353 (524)
Q Consensus 316 YWivkNSWG~~WGe~Gy~ri~~~~~~~~c~~~~~~~~~ 353 (524)
|||||||||++|||+|||||+++.. ..|++.+.+++|
T Consensus 277 yWivkNSWG~~WGe~GY~~i~r~~~-n~CgI~~~~~~p 313 (315)
T 2c0y_A 277 YWLVKNSWGHNFGEEGYIRMARNKG-NHCGIASFPSYP 313 (315)
T ss_dssp EEEEECSBCTTSTBTTEEEEECSSS-SGGGTTTSCEEE
T ss_pred EEEEEcCCCCCcCCCcEEEEEcCCC-CccCcCceeEEe
Confidence 9999999999999999999999742 269988766554
No 8
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=4.1e-68 Score=538.13 Aligned_cols=297 Identities=24% Similarity=0.386 Sum_probs=240.5
Q ss_pred HHHHHHHHHHHHccccccccccccccchhHHhhhhhhhhhcCCCCccccccccccccchHHHHHHHhC-CCCCCCCCCCC
Q psy1664 5 TADAVATFLKDLDLSQSSRNHSNGVFCDLSKAFDRVDHSILLPKLPFYGAEKNALSKLTLSELEMRMG-VHPDSKLPQNR 83 (524)
Q Consensus 5 t~~~f~~f~~~~~k~y~~~~~~~~r~~~f~~nl~~I~~~N~~~~~~~~~~g~N~fsd~t~eE~~~~~~-~~~~~~~~~~~ 83 (524)
+.++|++|+++|+|.|.+.+|...||.+|.+|+++|++||++. .+|++++|+|+|||.+||++++. ..... +...
T Consensus 18 ~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~--~~~~~g~N~FaDlt~eEf~~~~~g~~~~~--~~~~ 93 (322)
T 1pci_A 18 LIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKN--NSYWLGLNEFADLSNDEFNEKYVGSLIDA--TIEQ 93 (322)
T ss_dssp HHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTTC--CSEEECSCTTTTSCHHHHHHHHCCCBCCC--SSCC
T ss_pred HHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhccC--CceEEecCccccCCHHHHHHHhcCCCCcc--cccc
Confidence 4568999999999999988899999999999999999999875 79999999999999999998654 33221 1100
Q ss_pred CCcccccCCCCCCCCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCCC
Q psy1664 84 LPLLVQLSDPLEELPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDCG 163 (524)
Q Consensus 84 ~~~~~~~~~~~~~lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~~ 163 (524)
.............||++||||++ |+|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+. .+
T Consensus 94 ~~~~~~~~~~~~~lP~~~DwR~~----g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g--~~~~lSeq~lvdC~~-~~ 166 (322)
T 1pci_A 94 SYDEEFINEDIVNLPENVDWRKK----GAVTPVRHQGSCGSCWAFSAVATVEGINKIRTG--KLVELSEQELVDCER-RS 166 (322)
T ss_dssp CCSEECCCCCCCCSCSCEETTTT----TCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHS--CCCCBCHHHHHHSCT-TS
T ss_pred ccccccccccccCCCCeEecccC----CCCCCccccccCCccHHHHHHHHHHHHHHHHcC--CccccCHHHHHhhcC-CC
Confidence 00000111123479999999998 899999999999999999999999999999986 479999999999975 56
Q ss_pred CCCCCCChHHHHHHHHHhCCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccce
Q psy1664 164 NGCQGGFHGKAWKYWVTTGIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGR 243 (524)
Q Consensus 164 ~gC~GG~~~~a~~~~~~~Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (524)
.||+||++..||+|++++|+++|++| ||.+. .+.|.......+ .. ....|
T Consensus 167 ~gC~GG~~~~a~~yi~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~~~~--------~~-----~i~~~-- 216 (322)
T 1pci_A 167 HGCKGGYPPYALEYVAKNGIHLRSKY-------PYKAK--------QGTCRAKQVGGP--------IV-----KTSGV-- 216 (322)
T ss_dssp CGGGCBCHHHHHHHHHHHCBCBTTTS-------CCCSS--------CCCCTTTTCCSC--------CB-----CCCCE--
T ss_pred CCCCCCCHHHHHHHHHHhCCCchhhC-------CCCCC--------CCCCCCCCCCCc--------eE-----EEeeE--
Confidence 79999999999999999999998888 99876 677875422111 00 11111
Q ss_pred eeeecCC-CHHHHHHHHHHcCCeEEEEEec-ccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeC
Q psy1664 244 IAYSLPA-NEETIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVAN 321 (524)
Q Consensus 244 ~~~~~~~-~~~~ik~~l~~~GPV~v~i~v~-~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkN 321 (524)
..++. ++++|+++|++ |||+|+|+++ ++|++|++|||..+ |...++|||+|||||++ +|++||||||
T Consensus 217 --~~v~~~~e~~l~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~~-c~~~~~HaV~iVGyg~~-------~g~~yWivkN 285 (322)
T 1pci_A 217 --GRVQPNNEGNLLNAIAK-QPVSVVVESKGRPFQLYKGGIFEGP-CGTKVDGAVTAVGYGKS-------GGKGYILIKN 285 (322)
T ss_dssp --EECCSSBHHHHHHHHHH-SCEEEEECTTCHHHHTEEEEEECCS-CCSCCCEEEEEEEEEEE-------TTEEEEEEEC
T ss_pred --EEeCCCcHHHHHHHHHH-CCEEEEEecccccccccCCeEeCCC-CCCCCCEEEEEEEEecc-------CCccEEEEEe
Confidence 34554 67888888876 9999999997 79999999999875 55567999999999987 4789999999
Q ss_pred CCCCcccccCccccccccC--ccCCcCcCCcCCC
Q psy1664 322 SFNTNWGENGLFRIGCRPY--EIPCERYMNGSRS 353 (524)
Q Consensus 322 SWG~~WGe~Gy~ri~~~~~--~~~c~~~~~~~~~ 353 (524)
|||++|||+|||||+++.. ...||+.+.+++|
T Consensus 286 SWG~~WGe~GY~~i~r~~~~~~n~CgI~~~~~yp 319 (322)
T 1pci_A 286 SWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYP 319 (322)
T ss_dssp SBCSSSTBTTEEEEECCCSBSSCGGGGGGCCEEE
T ss_pred CCCCcccCCeEEEEEcCCCCCCCcCCcccceeEE
Confidence 9999999999999999852 2469988776655
No 9
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=4.4e-68 Score=537.02 Aligned_cols=297 Identities=23% Similarity=0.401 Sum_probs=241.2
Q ss_pred HHHHHHHHHHHHccccccccccccccchhHHhhhhhhhhhcCC--CCccccccccccccchHHHHHHHh-CCCCCCCCCC
Q psy1664 5 TADAVATFLKDLDLSQSSRNHSNGVFCDLSKAFDRVDHSILLP--KLPFYGAEKNALSKLTLSELEMRM-GVHPDSKLPQ 81 (524)
Q Consensus 5 t~~~f~~f~~~~~k~y~~~~~~~~r~~~f~~nl~~I~~~N~~~--~~~~~~~g~N~fsd~t~eE~~~~~-~~~~~~~~~~ 81 (524)
..++|++|+++|+|.| +.+|...|+.+|.+|+++|++||++. ...+|++++|+|+|||.+||++++ +..+... .
T Consensus 8 ~~~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~--~ 84 (316)
T 1cs8_A 8 LEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKP--R 84 (316)
T ss_dssp GHHHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCC--S
T ss_pred HHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHHhcCCCCCcc--c
Confidence 5678999999999999 78888999999999999999999852 126899999999999999998754 4332211 1
Q ss_pred CCCCcccccCCCCCCCCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCC
Q psy1664 82 NRLPLLVQLSDPLEELPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKD 161 (524)
Q Consensus 82 ~~~~~~~~~~~~~~~lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~ 161 (524)
..... ......+||++||||++ |+|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+..
T Consensus 85 --~~~~~-~~~~~~~lP~~~DwR~~----g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g--~~~~LSeq~lvdC~~~ 155 (316)
T 1cs8_A 85 --KGKVF-QEPLFYEAPRSVDWREK----GYVTPVKNQGQCGSCWAFSATGALEGQMFRKTG--RLISLSEQNLVDCSGP 155 (316)
T ss_dssp --CCEEC-CCCTTCCCCSCEEGGGG----TCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHS--CCCCBCHHHHHHHCGG
T ss_pred --cCccc-cCccccCCCCcEecCCC----CCcCCCCcccCCccHHHHHHHHHHHHHHHHHcC--CCcCcCHHHHHHhccc
Confidence 11111 11122469999999999 899999999999999999999999999999985 4799999999999864
Q ss_pred C-CCCCCCCChHHHHHHHH-HhCCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCcccccccc
Q psy1664 162 C-GNGCQGGFHGKAWKYWV-TTGIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDL 239 (524)
Q Consensus 162 ~-~~gC~GG~~~~a~~~~~-~~Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (524)
+ +.||+||++..||+|++ +.|+++|++| ||.+. .+.|....... .....
T Consensus 156 ~g~~gC~GG~~~~a~~yi~~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~~~--------------~~~i~ 206 (316)
T 1cs8_A 156 QGNEGCNGGLMDYAFQYVQDNGGLDSEESY-------PYEAT--------EESCKYNPKYS--------------VANDA 206 (316)
T ss_dssp GTCCGGGCBCHHHHHHHHHHHTCEEBTTTS-------CCCSS--------CCCCCCCGGGE--------------EECCC
T ss_pred cCCCCCCCCCHHHHHHHHHHhCCcCchhcc-------CCCCC--------CCCcCCCCccc--------------eeEec
Confidence 3 57999999999999997 6799998888 99876 66776431100 01111
Q ss_pred ccceeeeecCCCHHHHHHHHHHcCCeEEEEEec-ccccccCCceEEcCCCCC-CCCcEEEEEEec---cCCCCCCCccce
Q psy1664 240 NFGRIAYSLPANEETIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGP-LGEHAIRIIGWG---QEPLGEGTSSVV 314 (524)
Q Consensus 240 ~~~~~~~~~~~~~~~ik~~l~~~GPV~v~i~v~-~~f~~Y~sGIy~~~~~~~-~~~HaV~iVGyg---~~~~~~g~~~g~ 314 (524)
. .+.++.++++||++|+++|||+|+|+++ ++|++|++|||..+.|.. .++|||+||||| +++ +++
T Consensus 207 ~----~~~v~~~~~~ik~~l~~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~------~g~ 276 (316)
T 1cs8_A 207 G----FVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTES------DNN 276 (316)
T ss_dssp C----EEECCSCHHHHHHHHHHHCCEEEEECCCSHHHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSS------CCE
T ss_pred c----EEEeCCCHHHHHHHHHhcCCEEEEEecCChhhccccCceECCCCCCCCCCCEEEEEEEecCCcccC------CCC
Confidence 1 2345568999999999999999999998 589999999999886664 789999999999 542 478
Q ss_pred eEEEEeCCCCCcccccCccccccccCccCCcCcCCcCCC
Q psy1664 315 KYWLVANSFNTNWGENGLFRIGCRPYEIPCERYMNGSRS 353 (524)
Q Consensus 315 ~YWivkNSWG~~WGe~Gy~ri~~~~~~~~c~~~~~~~~~ 353 (524)
+|||||||||++|||+|||||+++.. ..|++.+.+++|
T Consensus 277 ~yWivkNSWG~~WGe~GY~~i~r~~~-n~CgI~~~~~~p 314 (316)
T 1cs8_A 277 KYWLVKNSWGEEWGMGGYVKMAKDRR-NHCGIASAASYP 314 (316)
T ss_dssp EEEEEECSBCTTSTBTTEEEEECSSS-SGGGTTTSCEEE
T ss_pred cEEEEEcCCCCCcccCCEEEEECCCC-CccCccceeeEe
Confidence 99999999999999999999999752 369988766554
No 10
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=3.4e-68 Score=536.47 Aligned_cols=295 Identities=22% Similarity=0.420 Sum_probs=238.0
Q ss_pred HHHHHHHHHHccccccccccccccchhHHhhhhhhhhhcCC--CCccccccccccccchHHHHHHH-hC-CCCCCCCCCC
Q psy1664 7 DAVATFLKDLDLSQSSRNHSNGVFCDLSKAFDRVDHSILLP--KLPFYGAEKNALSKLTLSELEMR-MG-VHPDSKLPQN 82 (524)
Q Consensus 7 ~~f~~f~~~~~k~y~~~~~~~~r~~~f~~nl~~I~~~N~~~--~~~~~~~g~N~fsd~t~eE~~~~-~~-~~~~~~~~~~ 82 (524)
++|++|+++|+|.|.+.+|...| .+|.+|+++|++||++. ...+|++++|+|+|||.+||+++ ++ ..... +..
T Consensus 3 ~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~--~~~ 79 (310)
T 2o6x_A 3 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRAS--DIL 79 (310)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHHHCCCCCCGG--GGS
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHHhcCCCCCcc--ccc
Confidence 57999999999999988888999 99999999999999862 12689999999999999999974 44 32211 000
Q ss_pred CCCcccccCCCCCCCCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCC
Q psy1664 83 RLPLLVQLSDPLEELPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDC 162 (524)
Q Consensus 83 ~~~~~~~~~~~~~~lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~ 162 (524)
...... .... .+||++||||++ |+|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+..+
T Consensus 80 ~~~~~~-~~~~-~~lP~~~DwR~~----g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g--~~~~LS~q~lvdC~~~~ 151 (310)
T 2o6x_A 80 SHGVPY-EANN-RAVPDKIDWRES----GYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNER--TSISFSEQQLVDCSRPW 151 (310)
T ss_dssp CSSEEC-CC-----CCSCEEGGGG----TCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHS--SCCCBCHHHHHHHCGGG
T ss_pred ccCCcc-cccc-CCCCCeEecCcC----CCCCCcccCCCCCccHHHHhHHHHHHHHHHHhC--CCcCcCHHHHHHhhhcc
Confidence 000000 1111 269999999998 899999999999999999999999999999986 47999999999998643
Q ss_pred -CCCCCCCChHHHHHHHHHhCCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCcccccccccc
Q psy1664 163 -GNGCQGGFHGKAWKYWVTTGIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNF 241 (524)
Q Consensus 163 -~~gC~GG~~~~a~~~~~~~Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (524)
+.||+||++..||+|+++.|+++|++| ||.+. .+.|...... ... ....
T Consensus 152 ~~~gC~GG~~~~a~~yi~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~~---------~~~-----~i~~- 201 (310)
T 2o6x_A 152 GNNGCGGGLMENAYQYLKQFGLETESSY-------PYTAV--------EGQCRYNKQL---------GVA-----KVTG- 201 (310)
T ss_dssp TCCGGGCCCHHHHHHHHTTSCBCBTTTS-------CCCSS--------CCCCCCCGGG---------CCE-----EEEE-
T ss_pred CCCCCCCCCHHHHHHHHHHCCcCchhcC-------CCCCC--------CCCccCCCCC---------Cce-----EeCe-
Confidence 679999999999999998899998888 99875 6677643110 000 1111
Q ss_pred ceeeeecC-CCHHHHHHHHHHcCCeEEEEEecccccccCCceEEcCCCC-CCCCcEEEEEEeccCCCCCCCccceeEEEE
Q psy1664 242 GRIAYSLP-ANEETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGG-PLGEHAIRIIGWGQEPLGEGTSSVVKYWLV 319 (524)
Q Consensus 242 ~~~~~~~~-~~~~~ik~~l~~~GPV~v~i~v~~~f~~Y~sGIy~~~~~~-~~~~HaV~iVGyg~~~~~~g~~~g~~YWiv 319 (524)
.+.++ .++++||++|+++|||+|+|+++++|++|++|||..+.|. ..++|||+|||||++ ++++||||
T Consensus 202 ---~~~v~~~~~~~i~~~l~~~GPV~v~i~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-------~g~~yWiv 271 (310)
T 2o6x_A 202 ---FYTVHSGSEVELKNLVGAEGPAAVAVDVESDFMMYRSGIYQSQTCSPLRVNHAVLAVGYGTQ-------GGTDYWIV 271 (310)
T ss_dssp ---EEEECSCCHHHHHHHHHHHCCEEEEECCCHHHHTEEEEEECCSSCCTTCCCEEEEEEEEEEE-------TTEEEEEE
T ss_pred ---EEEeCCCCHHHHHHHHHhcCCeEEEEecchhhhhCCCceecCCCCCCCCCCEEEEEEEEecc-------CCceEEEE
Confidence 23455 4789999999999999999999989999999999987665 478999999999987 47899999
Q ss_pred eCCCCCcccccCccccccccCccCCcCcCCcCCC
Q psy1664 320 ANSFNTNWGENGLFRIGCRPYEIPCERYMNGSRS 353 (524)
Q Consensus 320 kNSWG~~WGe~Gy~ri~~~~~~~~c~~~~~~~~~ 353 (524)
|||||++|||+|||||+++.. ..|++.+.+++|
T Consensus 272 kNSWG~~WGe~GY~~i~r~~~-n~Cgi~~~~~~p 304 (310)
T 2o6x_A 272 KNSWGLSWGERGYIRMVRNRG-NMCGIASLASLP 304 (310)
T ss_dssp ECSBCTTSTBTTEEEEECSSS-SGGGTTTSEEEE
T ss_pred EeCCCCccCCCcEEEEEcCCC-CcCCccceeeEE
Confidence 999999999999999999752 269987666554
No 11
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=6.1e-66 Score=519.17 Aligned_cols=287 Identities=22% Similarity=0.307 Sum_probs=231.3
Q ss_pred cHHHHHHHHHHHHccccccccccccccchhHHhhhhhhhhhcCCCCccccccccccccchHHHHHH-HhCCCCCCCCCCC
Q psy1664 4 STADAVATFLKDLDLSQSSRNHSNGVFCDLSKAFDRVDHSILLPKLPFYGAEKNALSKLTLSELEM-RMGVHPDSKLPQN 82 (524)
Q Consensus 4 st~~~f~~f~~~~~k~y~~~~~~~~r~~~f~~nl~~I~~~N~~~~~~~~~~g~N~fsd~t~eE~~~-~~~~~~~~~~~~~ 82 (524)
+++++|++|+++|+|.|.+.+|...||.+|.+|+++|++ |+ . ++|+|+|||.+||++ +++..... ...
T Consensus 3 ~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~-----~---g~N~F~Dlt~eEf~~~~~~~~~~~--~~~ 71 (312)
T 1xkg_A 3 SSIKTFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-NG-----G---AINHLSDLSLDEFKNRFLMSAEAF--EHL 71 (312)
T ss_dssp -CCCSHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-HC-----C---CCCTTTTSCHHHHHHHHSBCHHHH--HHH
T ss_pred hHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-cc-----C---CCCcccCCCHHHHHHHhcCCCCcc--ccc
Confidence 355689999999999999989999999999999999999 73 2 899999999999998 55532110 000
Q ss_pred CCCcccccC----CCCCCCCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhh
Q psy1664 83 RLPLLVQLS----DPLEELPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSC 158 (524)
Q Consensus 83 ~~~~~~~~~----~~~~~lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC 158 (524)
......... ....+||++||||++ |+|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||
T Consensus 72 ~~~~~~~~~~~~~~~~~~lP~~~DwR~~----g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g--~~~~LSeq~lvdC 145 (312)
T 1xkg_A 72 KTQFDLNAETNACSINGNAPAEIDLRQM----RTVTPIRMQGGCGSAWAFSGVAATESAYLAYRD--QSLDLAEQELVDC 145 (312)
T ss_dssp HHHHC-----CBCCCCSCCCSCEETTTT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHC--CCCCBCHHHHHHH
T ss_pred cCCcccccccccccccccCCCccccccC----CCcCCccccCCCCccHHHHHHHHHHHHHHHHhC--CCCCcCHHHHHhc
Confidence 000000000 012379999999998 899999999999999999999999999999985 4799999999999
Q ss_pred cCCCCCCCCCCChHHHHHHHHHhCCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccc
Q psy1664 159 CKDCGNGCQGGFHGKAWKYWVTTGIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDD 238 (524)
Q Consensus 159 ~~~~~~gC~GG~~~~a~~~~~~~Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (524)
+. ..||+||++..||+|+++.||++|++| ||.+. .+.|+ ..... . ...
T Consensus 146 ~~--~~GC~GG~~~~a~~yi~~~Gi~~e~~y-------PY~~~--------~~~C~-~~~~~---------~-----~~i 193 (312)
T 1xkg_A 146 AS--QHGCHGDTIPRGIEYIQHNGVVQESYY-------RYVAR--------EQSCR-RPNAQ---------R-----FGI 193 (312)
T ss_dssp TC--SSTTBCCCHHHHHHHHHHHCEEBGGGS-------CCCSS--------CCCCC-CCSSC---------E-----ECC
T ss_pred cC--CCCCCCCCHHHHHHHHHHcCCCccccC-------CccCC--------CCCCC-CCCCc---------e-----EEE
Confidence 72 279999999999999999999998888 99876 66776 21100 0 011
Q ss_pred cccceeeeecC-CCHHHHHHHHHH-cCCeEEEEEecc--cccccCCceEEcCCCC-C-CCCcEEEEEEeccCCCCCCCcc
Q psy1664 239 LNFGRIAYSLP-ANEETIMREIFR-HGPVEGSMTIYA--DMILYKTGIYKHVAGG-P-LGEHAIRIIGWGQEPLGEGTSS 312 (524)
Q Consensus 239 ~~~~~~~~~~~-~~~~~ik~~l~~-~GPV~v~i~v~~--~f~~Y~sGIy~~~~~~-~-~~~HaV~iVGyg~~~~~~g~~~ 312 (524)
.. ...++ .++++||++|++ +|||+|+|+++. +|++|++|||..+.|. . . +|||+|||||++ +
T Consensus 194 ~~----y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~~~~f~~Y~~GVy~~~~c~~~~~-~HaV~iVGyg~~-------~ 261 (312)
T 1xkg_A 194 SN----YCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDNGYQPN-YHAVNIVGYSNA-------Q 261 (312)
T ss_dssp SE----EEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCCCCSSCCE-EEEEEEEEEEEE-------T
T ss_pred ee----EEEeCCCCHHHHHHHHHhcCCCEEEEEEecccccccccCCcEEcCCCCCCCcC-ceEEEEEEEecc-------C
Confidence 11 23455 478999999999 999999999997 8999999999988775 4 6 999999999986 4
Q ss_pred ceeEEEEeCCCCCcccccCccccccccCccCCcCcCCcCCC
Q psy1664 313 VVKYWLVANSFNTNWGENGLFRIGCRPYEIPCERYMNGSRS 353 (524)
Q Consensus 313 g~~YWivkNSWG~~WGe~Gy~ri~~~~~~~~c~~~~~~~~~ 353 (524)
|++|||||||||++|||+|||||+++. ..|++.+.++++
T Consensus 262 g~~yWivkNSWG~~WGe~GY~~i~r~~--n~CgI~~~~~~~ 300 (312)
T 1xkg_A 262 GVDYWIVRNSWDTNWGDNGYGYFAANI--DLMMIEEYPYVV 300 (312)
T ss_dssp TEEEEEEECSBCTTSTBTTEEEEECSS--CGGGTTTCCEEE
T ss_pred CceEEEEEeCCCCcccCCcEEEEEcCC--CcccccceeEEe
Confidence 789999999999999999999999983 369998766554
No 12
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=3.8e-64 Score=494.94 Aligned_cols=253 Identities=51% Similarity=1.072 Sum_probs=220.2
Q ss_pred CCCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHHH
Q psy1664 96 ELPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKAW 175 (524)
Q Consensus 96 ~lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a~ 175 (524)
+||++||||++||+|+.|+||||||.||||||||++++||++++|+++++..+.||+|+|+||+...+.||+||++..||
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~ 81 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCESCGLGCEGGILGPAW 81 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTTSBCTTBCBCHHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcCCCCCCCCCCHHHHH
Confidence 69999999999999999999999999999999999999999999998765679999999999987667899999999999
Q ss_pred HHHHHhCCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecCCCHHHH
Q psy1664 176 KYWVTTGIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPANEETI 255 (524)
Q Consensus 176 ~~~~~~Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 255 (524)
+|++++|+++|++|...+.|+||... .|.
T Consensus 82 ~yi~~~Gi~~e~~y~~~~~c~PY~~~----------~c~----------------------------------------- 110 (254)
T 3qsd_A 82 DYWVKEGIVTGSSKENHAGCEPYPFP----------KCE----------------------------------------- 110 (254)
T ss_dssp HHHHHTCBCBCCCTTTCCSSSCCSSC----------CCB-----------------------------------------
T ss_pred HHHHHcCCCcccccccCcCcCCcccc----------ccc-----------------------------------------
Confidence 99999999999999999999999753 111
Q ss_pred HHHHHHcCCeEEEEEecccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCcccc
Q psy1664 256 MREIFRHGPVEGSMTIYADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLFRI 335 (524)
Q Consensus 256 k~~l~~~GPV~v~i~v~~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy~ri 335 (524)
T Consensus 111 -------------------------------------------------------------------------------- 110 (254)
T 3qsd_A 111 -------------------------------------------------------------------------------- 110 (254)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCccCCcCcCCcCCCCCCCCCCCCcccccccccCccccccCcceeeeEEEEcCCCHHHHHHHHHhCCCEEEEEeccc
Q psy1664 336 GCRPYEIPCERYMNGSRSSCQANEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPANEETIMREIFRHGPVEGSMTIYA 415 (524)
Q Consensus 336 ~~~~~~~~c~~~~~~~~~~C~~~~~~~p~C~~~C~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~gPv~~~~~~~~ 415 (524)
....+..+.|......++.|...|..++...+..++.+....|.++.++++||++|+++|||+++|++++
T Consensus 111 ----------~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gPv~~~~~~~~ 180 (254)
T 3qsd_A 111 ----------HHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVKNDEKAIQKEIMKYGPVEAGFTVYE 180 (254)
T ss_dssp ----------CSSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEEECCSCHHHHHHHHHHHCCEEEEEEEEG
T ss_pred ----------ccccCcCCCCcccccCCccccccccCCccceeeeeeeeeeeeEecCCcHHHHHHHHHHcCCEEEEEEecc
Confidence 0001111234333345667778888777766777777777788888899999999999999999999988
Q ss_pred ccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEcCCCCCCCCCcEEEEEeCCCccCccccceeccc
Q psy1664 416 DMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLFRIVRGQNECGIEADITAGLP 495 (524)
Q Consensus 416 ~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~NSWG~~WG~~Gy~~i~~g~~~cgi~~~~~~~~p 495 (524)
+|++|++|||..+++...++|+|+|||||+++ +.+|||||||||++||++|||||+||.|.|||++.+++++|
T Consensus 181 ~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~~-------g~~ywivkNSWG~~WG~~Gy~~i~rg~n~CgI~~~~~~~~p 253 (254)
T 3qsd_A 181 DFLNYKSGIYKHITGETLGGHAIRIIGWGVEN-------KAPYWLIANSWNEDWGENGYFRIVRGRDECSIESEVTAGRI 253 (254)
T ss_dssp GGGGCCSSEECCCSSCEEEEEEEEEEEEEEET-------TEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSSEEEEEC
T ss_pred ccccccCCeeccCCCCCCCCeEEEEEEEeecC-------CeeEEEEEeCCCCCcccCCeEEEEcCCCeecCCCceEeecc
Confidence 99999999998877766679999999999876 88999999999999999999999999999999999999998
Q ss_pred e
Q psy1664 496 K 496 (524)
Q Consensus 496 ~ 496 (524)
.
T Consensus 254 ~ 254 (254)
T 3qsd_A 254 N 254 (254)
T ss_dssp C
T ss_pred C
Confidence 3
No 13
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=2.9e-63 Score=519.31 Aligned_cols=297 Identities=30% Similarity=0.516 Sum_probs=183.1
Q ss_pred cccccccchhHHhhhhhhhhhcCCCCcccccc-ccccccchHHHHHHHhCCCCCCC-CCCCCCCcccccCCCCCCCCCcc
Q psy1664 24 NHSNGVFCDLSKAFDRVDHSILLPKLPFYGAE-KNALSKLTLSELEMRMGVHPDSK-LPQNRLPLLVQLSDPLEELPEGF 101 (524)
Q Consensus 24 ~~~~~r~~~f~~nl~~I~~~N~~~~~~~~~~g-~N~fsd~t~eE~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lP~s~ 101 (524)
-+...|+.+|.+|+++|++||+++ .+|+++ +|+|+|||.+||+++++...... .+. ..+..........+||++|
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~~~--~~~~~~~~n~faDlT~eEf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lP~s~ 211 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINAIQ--KSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPK-PAPLTAEIQQKILFLPTSW 211 (441)
T ss_dssp --------------------------------------------------------------------------CCCSCE
T ss_pred hhHHHHHHHHHHHHHHHHHHHccC--CceEeecccccccCCHHHHHHHhCCCcccccccc-cCccccccccccccCCCCE
Confidence 455788999999999999999987 799998 79999999999999776432110 000 0000001112235799999
Q ss_pred ccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHH-HHHHHH
Q psy1664 102 DARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKA-WKYWVT 180 (524)
Q Consensus 102 DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a-~~~~~~ 180 (524)
|||++ .++++|+||||||.||||||||++++||++++|++++...+.||+|+|+||+. .+.||+||++..| ++|+++
T Consensus 212 DwR~~-~g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~-~~~GC~GG~~~~aa~~yi~~ 289 (441)
T 3pdf_A 212 DWRNV-HGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQ-YAQGCEGGFPYLIAGKYAQD 289 (441)
T ss_dssp ETTCB-TTBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHTTHHHHH
T ss_pred ECCcC-CCCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhcc-CCCCCCCCchhHHHHHHHHh
Confidence 99997 23458999999999999999999999999999998755456799999999975 4779999999997 899999
Q ss_pred hCCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecCCCHHHHHHHHH
Q psy1664 181 TGIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPANEETIMREIF 260 (524)
Q Consensus 181 ~Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~ 260 (524)
+||++|+.| ||.+. .+.|..... |..
T Consensus 290 ~Gi~tE~~y-------PY~~~--------~~~C~~~~~--------~~~------------------------------- 315 (441)
T 3pdf_A 290 FGLVEEACF-------PYTGT--------DSPCKMKED--------CFR------------------------------- 315 (441)
T ss_dssp TCBCBGGGS-------CCCSS--------CCCSCCCSS--------CCC-------------------------------
T ss_pred cCCCcHHHe-------eeccc--------CCCCCCccc--------cce-------------------------------
Confidence 999998888 99865 555643110 000
Q ss_pred HcCCeEEEEEecccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCccccccccC
Q psy1664 261 RHGPVEGSMTIYADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLFRIGCRPY 340 (524)
Q Consensus 261 ~~GPV~v~i~v~~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy~ri~~~~~ 340 (524)
..+.+|. +|.
T Consensus 316 -----------------------------------~~~~~y~-------------------------------~v~---- 325 (441)
T 3pdf_A 316 -----------------------------------YYSSEYH-------------------------------YVG---- 325 (441)
T ss_dssp -----------------------------------BCEEEEE-------------------------------ETT----
T ss_pred -----------------------------------eeeccEE-------------------------------EeC----
Confidence 0000110 000
Q ss_pred ccCCcCcCCcCCCCCCCCCCCCcccccccccCccccccCcceeeeEEEEcCCCHHHHHHHHHhCCCEEEEEecccccccc
Q psy1664 341 EIPCERYMNGSRSSCQANEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPANEETIMREIFRHGPVEGSMTIYADMILY 420 (524)
Q Consensus 341 ~~~c~~~~~~~~~~C~~~~~~~p~C~~~C~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~gPv~~~~~~~~~f~~y 420 (524)
.+. ...++++||.+|+++|||+|+|+|+++|++|
T Consensus 326 -----------------------------------~~~-----------~~~~e~~ik~al~~~GPVsvai~a~~~F~~Y 359 (441)
T 3pdf_A 326 -----------------------------------GFY-----------GGCNEALMKLELVHHGPMAVAFEVYDDFLHY 359 (441)
T ss_dssp -----------------------------------SST-----------TCCCHHHHHHHHHHHCCEEEEECCCGGGGGC
T ss_pred -----------------------------------Ccc-----------CCCcHHHHHHHHHHCCCeEEEEEeccccccc
Confidence 000 0136889999999999999999998899999
Q ss_pred cccEEeCCCCC------CccCeeEEEeeecCCCCCCCccCCccEEEEEcCCCCCCCCCcEEEEEeCCCccCccccceecc
Q psy1664 421 KTGIYKHVAGG------PLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLFRIVRGQNECGIEADITAGL 494 (524)
Q Consensus 421 ~~gi~~~~~~~------~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~NSWG~~WG~~Gy~~i~~g~~~cgi~~~~~~~~ 494 (524)
++|||..+++. ..++|||+|||||++. +.|.+|||||||||++||++|||||+||.|.|||++.+++++
T Consensus 360 ~sGVy~~~~~~~~~~~~~~~~HaV~iVGyG~~~-----~~G~~YWIVkNSWG~~WGe~GYfri~rg~n~CGI~s~~~a~~ 434 (441)
T 3pdf_A 360 KKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDS-----ASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAAT 434 (441)
T ss_dssp CSSEECCC---CCCCCCCCCCEEEEEEEEEECT-----TTCCEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSCCEEEE
T ss_pred CCceEecCCCCcccCCCCcCCeEEEEEEecccC-----CCCceEEEEEcCCCCCcCCCeEEEEEcCCCccCCCCceEEee
Confidence 99999876532 3589999999999862 128899999999999999999999999999999999999999
Q ss_pred ceeccc
Q psy1664 495 PKIGLE 500 (524)
Q Consensus 495 p~~~~~ 500 (524)
|.+..|
T Consensus 435 P~~~~e 440 (441)
T 3pdf_A 435 PIPKLE 440 (441)
T ss_dssp ECCCCC
T ss_pred ccCCCC
Confidence 987754
No 14
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=6e-63 Score=489.40 Aligned_cols=255 Identities=53% Similarity=1.203 Sum_probs=215.0
Q ss_pred CCCCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCC-CCCCCCCCChHH
Q psy1664 95 EELPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKD-CGNGCQGGFHGK 173 (524)
Q Consensus 95 ~~lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~-~~~gC~GG~~~~ 173 (524)
.+||++||||++|++|+.|+||||||.||||||||++++||++++|++++...+.||+|+|+||+.. .+.||+||++..
T Consensus 5 ~~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~ 84 (266)
T 3cbj_A 5 LKLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAE 84 (266)
T ss_dssp CCCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHH
T ss_pred CCCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHH
Confidence 4799999999999999999999999999999999999999999999986555799999999999753 467999999999
Q ss_pred HHHHHHHhCCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecCCCHH
Q psy1664 174 AWKYWVTTGIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPANEE 253 (524)
Q Consensus 174 a~~~~~~~Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (524)
||+|++++|++++.+|...|.|+||... .|...
T Consensus 85 a~~y~~~~Gi~~~~~Y~~~e~~~PY~~~----------~~~~~------------------------------------- 117 (266)
T 3cbj_A 85 AWNFWTRKGLVSGGLYESHVGCRPYSIP----------PCEAH------------------------------------- 117 (266)
T ss_dssp HHHHHHHTCBCBCCSTTCCCSSSCCCSC----------CCSCC-------------------------------------
T ss_pred HHHHHHHhCcCcCccccccccccCcccc----------ccccc-------------------------------------
Confidence 9999999999999999877899999753 11000
Q ss_pred HHHHHHHHcCCeEEEEEecccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCcc
Q psy1664 254 TIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLF 333 (524)
Q Consensus 254 ~ik~~l~~~GPV~v~i~v~~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy~ 333 (524)
T Consensus 118 -------------------------------------------------------------------------------- 117 (266)
T 3cbj_A 118 -------------------------------------------------------------------------------- 117 (266)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCccCCcCcCCcCCCCCCCCCCCCcccccccccCccccccCcceeeeEEEEcCCCHHHHHHHHHhCCCEEEEEec
Q psy1664 334 RIGCRPYEIPCERYMNGSRSSCQANEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPANEETIMREIFRHGPVEGSMTI 413 (524)
Q Consensus 334 ri~~~~~~~~c~~~~~~~~~~C~~~~~~~p~C~~~C~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~gPv~~~~~~ 413 (524)
..+..+.|.. ...+|.|...|+.++...|..++++....+.++.++++||++|+++|||+++|++
T Consensus 118 --------------~~~~~~~C~~-~~~~p~c~~~c~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~i~~~GPV~v~i~~ 182 (266)
T 3cbj_A 118 --------------VNGARPPCTG-EGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSV 182 (266)
T ss_dssp --------------CSCSSCCCCS-CCCCCCCCCSCCTTCCSCTGGGCBCBSCCEECCSCHHHHHHHHHHHCCEEEEEEE
T ss_pred --------------ccCCCCCCcc-ccCCCccccccCCCCcceeeeeeeeeeeeEEeCCCHHHHHHHHHhcCCEEEEEEe
Confidence 0000112221 1235667777776666556666666666678888999999999999999999999
Q ss_pred ccccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEcCCCCCCCCCcEEEEEeCCCccCccccceec
Q psy1664 414 YADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLFRIVRGQNECGIEADITAG 493 (524)
Q Consensus 414 ~~~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~NSWG~~WG~~Gy~~i~~g~~~cgi~~~~~~~ 493 (524)
+++|++|++|||.++++...++|||+|||||+++ |++|||||||||++||++|||||+||.|.|||++.++++
T Consensus 183 ~~~f~~Y~~Gvy~~~~~~~~~~HaV~iVGyg~~~-------g~~yWivkNSWG~~WGe~Gy~~i~rg~n~cgI~~~~~~~ 255 (266)
T 3cbj_A 183 YSDFLLYKSGVYQHVTGEMMGGHAIRILGWGVEN-------GTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAG 255 (266)
T ss_dssp EGGGGGCCSSEECCCSSCEEEEEEEEEEEEEEET-------TEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEEC
T ss_pred ccchhhcCCeEEecCCCCccCCeEEEEEEecccC-------CceEEEEEcCCCCccCCCCEEEEEcCCCcccccCceEEE
Confidence 8899999999998876665679999999999876 899999999999999999999999999999999999999
Q ss_pred cceec
Q psy1664 494 LPKIG 498 (524)
Q Consensus 494 ~p~~~ 498 (524)
+|.+.
T Consensus 256 ~p~~~ 260 (266)
T 3cbj_A 256 IPRTD 260 (266)
T ss_dssp CBCCC
T ss_pred Eeecc
Confidence 99753
No 15
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=8.5e-55 Score=418.16 Aligned_cols=209 Identities=27% Similarity=0.526 Sum_probs=177.2
Q ss_pred CCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHHHH
Q psy1664 97 LPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKAWK 176 (524)
Q Consensus 97 lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a~~ 176 (524)
||++||||++ ++|+||||||.||||||||++++||++++++++ ..+.||+|+|+||+. .+.||+||++..|++
T Consensus 1 lP~~~Dwr~~----~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~--~~~~lS~q~l~dc~~-~~~gC~GG~~~~a~~ 73 (215)
T 3kwz_A 1 APDSVDYRKK----GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTG--KLLNLSPQNLVDCVS-ENDGCGGGYMTNAFQ 73 (215)
T ss_dssp CTTCEETTTT----TCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHS--CCCCBCHHHHHHHCT-TSCTTBCCCHHHHHH
T ss_pred CCCCCccCcC----CCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcC--CCcccCHHHHHHhcC-CCCCCCCCCHHHHHH
Confidence 7999999998 899999999999999999999999999999986 468999999999975 467999999999999
Q ss_pred HHHHh-CCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecCC-CHHH
Q psy1664 177 YWVTT-GIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPA-NEET 254 (524)
Q Consensus 177 ~~~~~-Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 254 (524)
|++++ |+++|++| ||... .+.|+...... ...... ...++. ++++
T Consensus 74 ~~~~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~~~--------------~~~i~~----~~~v~~~~~~~ 120 (215)
T 3kwz_A 74 YVQKNRGIDSEDAY-------PYVGQ--------EESCMYNPTGK--------------AAKCRG----YREIPEGNEKA 120 (215)
T ss_dssp HHHHHTCEEBTTTS-------CCCSS--------CCCCCCCGGGE--------------EECCCC----EEECCTTCHHH
T ss_pred HHHHhCCccccccC-------CCccC--------CCccccCCCCc--------------eeEecc----eEEeCCCCHHH
Confidence 99988 99999888 99876 56676432110 001111 234443 7899
Q ss_pred HHHHHHHcCCeEEEEEec-ccccccCCceEEcCCCC-CCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCc
Q psy1664 255 IMREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGG-PLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGL 332 (524)
Q Consensus 255 ik~~l~~~GPV~v~i~v~-~~f~~Y~sGIy~~~~~~-~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy 332 (524)
||++|+++|||+|+|+++ ++|++|++|||..+.|. ..++|||+|||||++ ++++|||||||||++|||+||
T Consensus 121 ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WG~~Gy 193 (215)
T 3kwz_A 121 LKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ-------KGNKHWIIKNSWGENWGNKGY 193 (215)
T ss_dssp HHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCTTCCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTE
T ss_pred HHHHHHHCCCEEEEEeechhhhhcccCCeECCCCCCCChhhCEEEEEEEecc-------CCceEEEEECCcCcccccCCE
Confidence 999999999999999998 69999999999988774 478999999999986 468999999999999999999
Q ss_pred cccccccCccCCcCcCCcCCC
Q psy1664 333 FRIGCRPYEIPCERYMNGSRS 353 (524)
Q Consensus 333 ~ri~~~~~~~~c~~~~~~~~~ 353 (524)
|||+|+.. ..|++...+++|
T Consensus 194 ~~i~r~~~-n~Cgi~~~~~~p 213 (215)
T 3kwz_A 194 ILMARNKN-NACGIANLASFP 213 (215)
T ss_dssp EEEESSSS-SGGGTTSSCEEE
T ss_pred EEEecCCC-CccCcCCceeee
Confidence 99999763 269998766554
No 16
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=1.8e-54 Score=417.12 Aligned_cols=214 Identities=29% Similarity=0.560 Sum_probs=176.0
Q ss_pred CCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCC-CCCCCCCChHHHH
Q psy1664 97 LPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDC-GNGCQGGFHGKAW 175 (524)
Q Consensus 97 lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~-~~gC~GG~~~~a~ 175 (524)
||++||||++ ++++||||||.||||||||++++||++++|+++ ..+.||+|+|+||+... +.||+||++..||
T Consensus 1 lP~~~DwR~~----~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g--~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~ 74 (220)
T 2xu3_A 1 APRSVDWREK----GYVTPVKNQGQCGSCWAFSATGALEGQMFRKTG--RLISLSEQNLVDCSGPQGNEGCNGGLMDYAF 74 (220)
T ss_dssp CCSCEEGGGG----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHS--CCCCBCHHHHHHHCTTTTCCTTBCCCHHHHH
T ss_pred CCCcEeCCCC----CCCCCCcccCcccHHHHHHhHHHHHHHHHHhcC--CceecCHHHHHhhccCCCCCCCCCCCHHHHH
Confidence 7999999998 889999999999999999999999999999985 46999999999998643 5799999999999
Q ss_pred HHHH-HhCCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecCCCHHH
Q psy1664 176 KYWV-TTGIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPANEET 254 (524)
Q Consensus 176 ~~~~-~~Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (524)
+|++ +.|+++|++| ||... .+.|+..... . ...... ...++.++++
T Consensus 75 ~y~~~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~~---------~-----~~~i~~----~~~v~~~~~~ 121 (220)
T 2xu3_A 75 QYVQDNGGLDSEESY-------PYEAT--------EESCKYNPKY---------S-----VANDTG----FVDIPKQEKA 121 (220)
T ss_dssp HHHHHHTCEEBTTTS-------CCCSS--------CCCCCCCGGG---------E-----EECCSE----EEECCSCHHH
T ss_pred HHHHHhCCccccccc-------CCccc--------CcCccCCCCC---------c-----ceeeee----EEEeCCCHHH
Confidence 9996 6799999888 99876 5667643110 0 001111 2345558999
Q ss_pred HHHHHHHcCCeEEEEEec-ccccccCCceEEcCCCCC-CCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCc
Q psy1664 255 IMREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGP-LGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGL 332 (524)
Q Consensus 255 ik~~l~~~GPV~v~i~v~-~~f~~Y~sGIy~~~~~~~-~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy 332 (524)
||++|+++|||+|+|+++ ++|++|++|||..+.|.. .++|||+|||||++.. ++++++|||||||||++|||+||
T Consensus 122 ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~---~~~g~~yWivkNSWG~~WG~~Gy 198 (220)
T 2xu3_A 122 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFEST---ESDNNKYWLVKNSWGEEWGMGGY 198 (220)
T ss_dssp HHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCSSCCCEEEEEEEEEECCC---SSSCCEEEEEECSBCTTSTBTTE
T ss_pred HHHHHHhcCCEEEEEeecCcccccccceEEcCCCCCCCCCCeEEEEEEcCCccc---cCCCCcEEEEEeCCCCCcccCcE
Confidence 999999999999999998 589999999999876654 7899999999995311 12578999999999999999999
Q ss_pred cccccccCccCCcCcCCcCCC
Q psy1664 333 FRIGCRPYEIPCERYMNGSRS 353 (524)
Q Consensus 333 ~ri~~~~~~~~c~~~~~~~~~ 353 (524)
|||+++.. ..|++...+++|
T Consensus 199 ~~i~~~~~-n~Cgi~~~~~~p 218 (220)
T 2xu3_A 199 VKMAKDRR-NHCGIASAASYP 218 (220)
T ss_dssp EEEECSSS-SGGGTTTSCEEE
T ss_pred EEEecCCC-CcCCccccceee
Confidence 99999752 258887665443
No 17
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=2.7e-54 Score=414.00 Aligned_cols=207 Identities=26% Similarity=0.542 Sum_probs=173.5
Q ss_pred CCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHHHH
Q psy1664 97 LPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKAWK 176 (524)
Q Consensus 97 lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a~~ 176 (524)
||++||||++ ++|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+. .+.||+||++..||+
T Consensus 1 lP~~~DwR~~----~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g--~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~ 73 (214)
T 1m6d_A 1 APPEWDWRSK----GAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQG--TLLSLSEQELLDCDK-MDKACMGGLPSNAYS 73 (214)
T ss_dssp CCSCEEGGGG----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHS--CCCCBCHHHHHHHCS-SSCTTBCCCHHHHHH
T ss_pred CCCcCcCCCC----CCCCCCccCCCCchHHHHHHHHHHHHHHHHHcC--CCcccCHHHHHHhcC-CCCCCCCCCHHHHHH
Confidence 7999999998 899999999999999999999999999999875 469999999999974 367999999999999
Q ss_pred HHHHh-CCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecCCCHHHH
Q psy1664 177 YWVTT-GIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPANEETI 255 (524)
Q Consensus 177 ~~~~~-Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 255 (524)
|++++ |+++|++| ||.+. ...|+..... . ..+....+.++.++++|
T Consensus 74 ~i~~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~~---------~---------~~~i~~~~~i~~~~~~i 120 (214)
T 1m6d_A 74 AIKNLGGLETEDDY-------SYQGH--------MQSCQFSAEK---------A---------KVYIQDSVELSQNEQKL 120 (214)
T ss_dssp HHHHHTCBCBTTTS-------CCCSS--------CCCCCCCGGG---------C---------CBCCSEEEECCSCHHHH
T ss_pred HHHHhcCcccccCc-------CcCCC--------CCcCCCCccc---------c---------eEEecCEEEeChHHHHH
Confidence 99987 89999888 99865 5667643110 0 00111234566789999
Q ss_pred HHHHHHcCCeEEEEEecccccccCCceEEcC--CCCC-CCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCc
Q psy1664 256 MREIFRHGPVEGSMTIYADMILYKTGIYKHV--AGGP-LGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGL 332 (524)
Q Consensus 256 k~~l~~~GPV~v~i~v~~~f~~Y~sGIy~~~--~~~~-~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy 332 (524)
|++|+++|||+|+|+++ +|++|++|||..+ .|.. .++|||+|||||++ ++++|||||||||++|||+||
T Consensus 121 k~~l~~~GPV~v~i~~~-~f~~Y~~Giy~~~~~~c~~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WGe~Gy 192 (214)
T 1m6d_A 121 AAWLAKRGPISVAINAF-GMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGQR-------SDVPFWAIKNSWGTDWGEKGY 192 (214)
T ss_dssp HHHHHHHCCEEEEECTH-HHHHCCSSEECCCGGGSCTTCCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTE
T ss_pred HHHHHhCCCEEEEEEec-hhhhcCCceecCCCCcCCCCcCCEEEEEEEEeec-------CCcEEEEEEeCCCCCcccCcE
Confidence 99999999999999997 5999999999864 3543 68999999999986 478999999999999999999
Q ss_pred cccccccCccCCcCcCCcCCC
Q psy1664 333 FRIGCRPYEIPCERYMNGSRS 353 (524)
Q Consensus 333 ~ri~~~~~~~~c~~~~~~~~~ 353 (524)
|||+++.. .|++....+++
T Consensus 193 ~~i~r~~n--~Cgi~~~~~~~ 211 (214)
T 1m6d_A 193 YYLHRGSG--ACGVNTMASSA 211 (214)
T ss_dssp EEEESSSC--GGGTTTTCEEE
T ss_pred EEEEcCCC--ccccCceeEEE
Confidence 99999854 68887655443
No 18
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=4.5e-54 Score=412.78 Aligned_cols=206 Identities=27% Similarity=0.549 Sum_probs=169.4
Q ss_pred CCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHHHH
Q psy1664 97 LPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKAWK 176 (524)
Q Consensus 97 lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a~~ 176 (524)
||++||||++ |+|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+. .+.||+||++..||+
T Consensus 1 lP~~~Dwr~~----g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~--~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~ 73 (215)
T 3i06_A 1 APAAVDWRAR----GAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGH--PLTNLSEQMLVSCDK-TDSGCSGGLMNNAFE 73 (215)
T ss_dssp CCSEEEGGGG----TCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTS--CCCCCCHHHHHHHCS-SSCGGGCCCHHHHHH
T ss_pred CCCcccCCcC----CCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCC--CCCccCHHHHhccCC-CCCCCCCCCHHHHHH
Confidence 7999999998 899999999999999999999999999999864 579999999999964 467999999999999
Q ss_pred HHHHh---CCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecCCCHH
Q psy1664 177 YWVTT---GIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPANEE 253 (524)
Q Consensus 177 ~~~~~---Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (524)
|++++ |+++|++| ||... .+....|....... .+ . ....+.++.+++
T Consensus 74 y~~~~~~gGi~~e~~y-------PY~~~-----~~~~~~C~~~~~~~---------~~-----~----i~~~~~v~~~~~ 123 (215)
T 3i06_A 74 WIVQENNGAVYTEDSY-------PYASG-----EGISPPCTTSGHTV---------GA-----T----ITGHVELPQDEA 123 (215)
T ss_dssp HHHHHSTTEEEC-CCS-------CCCCT-----TSCCCCCCCSSCCE---------EE-----E----EEEEEECCSCHH
T ss_pred HHHHhccccccccCcc-------CCcCC-----CCCCCccccCCccc---------ce-----E----ecceEEeCChHH
Confidence 99986 69998888 99864 11123454322100 00 0 112346677899
Q ss_pred HHHHHHHHcCCeEEEEEecccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCcc
Q psy1664 254 TIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLF 333 (524)
Q Consensus 254 ~ik~~l~~~GPV~v~i~v~~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy~ 333 (524)
+||++|+++|||+|+|++ ++|++|++|||.. +....++|||+|||||++ ++++|||||||||++|||+|||
T Consensus 124 ~ik~~l~~~gPV~v~~~~-~~f~~Y~~Giy~~-~~~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WGe~Gy~ 194 (215)
T 3i06_A 124 QIAAWLAVNGPVAVAVDA-SSWMTYTGGVMTS-CVSEQLDHGVLLVGYNDS-------AAVPYWIIKNSWTTQWGEEGYI 194 (215)
T ss_dssp HHHHHHHHHCCEEEEECC-TTGGGCCSSEECS-CCCSCCCEEEEEEEEESS-------SSSCEEEEECSBCTTSTBTTEE
T ss_pred HHHHHHHHCCCEEEEEEc-hHHhcCCCCcccC-CCCCccCcEEEEEEEecc-------CCcEEEEEECCCCCCcccCceE
Confidence 999999999999999999 6899999999974 334567999999999976 4689999999999999999999
Q ss_pred ccccccCccCCcCcCCc
Q psy1664 334 RIGCRPYEIPCERYMNG 350 (524)
Q Consensus 334 ri~~~~~~~~c~~~~~~ 350 (524)
||+++.+ .|++...+
T Consensus 195 ~i~rg~n--~cgi~~~~ 209 (215)
T 3i06_A 195 RIAKGSN--QCLVKEEA 209 (215)
T ss_dssp EEESSSC--GGGTTSSE
T ss_pred EEecCCC--eecCCCce
Confidence 9999864 68887654
No 19
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=6.8e-54 Score=411.64 Aligned_cols=209 Identities=31% Similarity=0.558 Sum_probs=172.7
Q ss_pred CCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHHHH
Q psy1664 97 LPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKAWK 176 (524)
Q Consensus 97 lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a~~ 176 (524)
||++||||++ +.|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+. .+.||+||++..||+
T Consensus 1 lP~~~DwR~~----~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g--~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~ 73 (216)
T 1ppo_A 1 LPENVDWRKK----GAVTPVRHQGSCGSCWAFSAVATVEGINKIRTG--KLVELSEQELVDCER-RSHGCKGGYPPYALE 73 (216)
T ss_dssp CCSCEETTTT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHS--CCCCBCHHHHHHHCS-SSCTTBCCCHHHHHH
T ss_pred CCCcCcCCCC----CCCCCCccCCcCccHHHHHHHHHHHHHHHHccC--CceecCHHHHHhccC-CCCCCCCCCHHHHHH
Confidence 7999999998 889999999999999999999999999999886 469999999999975 467999999999999
Q ss_pred HHHHhCCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecC-CCHHHH
Q psy1664 177 YWVTTGIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLP-ANEETI 255 (524)
Q Consensus 177 ~~~~~Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i 255 (524)
|++++|+++|++| ||... .+.|+...... +.+ ....| ..++ .++++|
T Consensus 74 yi~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~~~--------~~~-----~i~~y----~~v~~~~~~~i 121 (216)
T 1ppo_A 74 YVAKNGIHLRSKY-------PYKAK--------QGTCRAKQVGG--------PIV-----KTSGV----GRVQPNNEGNL 121 (216)
T ss_dssp HHHHHCBCBTTTS-------CCCSS--------CCCCCGGGCCS--------CCB-----CCCEE----EECCSSCHHHH
T ss_pred HHHHhCcCccccC-------CccCC--------CCCcCCCCCCC--------ceE-----EeccE----EEECCCCHHHH
Confidence 9999999998888 99875 56675432100 000 11111 2345 368889
Q ss_pred HHHHHHcCCeEEEEEec-ccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCccc
Q psy1664 256 MREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLFR 334 (524)
Q Consensus 256 k~~l~~~GPV~v~i~v~-~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy~r 334 (524)
|++|++ |||+|+|+++ ++|++|++|||+.+ |...++|||+|||||++ ++++|||||||||++|||+||||
T Consensus 122 ~~~l~~-GPV~v~~~~~~~~f~~Y~~Giy~~~-~~~~~~HaV~iVGyg~~-------~g~~ywivkNSWG~~WG~~Gy~~ 192 (216)
T 1ppo_A 122 LNAIAK-QPVSVVVESKGRPFQLYKGGIFEGP-CGTKVDHAVTAVGYGKS-------GGKGYILIKNSWGTAWGEKGYIR 192 (216)
T ss_dssp HHHHHH-SCEEEEECCCSHHHHHCCSSEECCS-CCSCCCEEEEEEEEEEE-------TTEEEEEEECSBCSSSTBTTEEE
T ss_pred HHHHHh-CCEEEEEecCChhhhhcCCceECCC-CCCCCCEEEEEEEeecc-------CCccEEEEEeCCCCCcccCcEEE
Confidence 999986 9999999997 79999999999875 45567999999999987 46899999999999999999999
Q ss_pred cccccC--ccCCcCcCCcCCC
Q psy1664 335 IGCRPY--EIPCERYMNGSRS 353 (524)
Q Consensus 335 i~~~~~--~~~c~~~~~~~~~ 353 (524)
|+++.. ...|++...+++|
T Consensus 193 i~~~~~~~~n~Cgi~~~~~~p 213 (216)
T 1ppo_A 193 IKRAPGNSPGVCGLYKSSYYP 213 (216)
T ss_dssp EECCCSSSSCGGGTTSCCEEE
T ss_pred EEcCCCCCCCcCccccceeeE
Confidence 999753 2468887665544
No 20
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=2.6e-54 Score=416.21 Aligned_cols=209 Identities=28% Similarity=0.576 Sum_probs=176.4
Q ss_pred CCCccccccCCCCCC-CCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCC-CCCCCCCChHHH
Q psy1664 97 LPEGFDARINWPYCP-TIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDC-GNGCQGGFHGKA 174 (524)
Q Consensus 97 lP~s~DwR~~~~~~g-~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~-~~gC~GG~~~~a 174 (524)
||++||||++ + +|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+... +.||+||++..|
T Consensus 1 lP~~~DwR~~----~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~--~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a 74 (220)
T 8pch_A 1 YPPSMDWRKK----GNFVSPVKNQGSCGSCWTFSTTGALESAVAIATG--KMLSLAEQQLVDCAQNFNNHGCQGGLPSQA 74 (220)
T ss_dssp CCSCEEHHHH----SSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHC--CCCCBCHHHHHHHGGGGTCCGGGCCCHHHH
T ss_pred CCCCEecCcC----CCcCCcccccCCCchHHHHHHHHHHHHHHHHHcC--CCCCCCHHHHhhCcCccCCCCCCCCCHHHH
Confidence 7999999998 6 79999999999999999999999999999986 46999999999998543 569999999999
Q ss_pred HHHHHHh-CCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecC-CCH
Q psy1664 175 WKYWVTT-GIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLP-ANE 252 (524)
Q Consensus 175 ~~~~~~~-Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 252 (524)
++|++++ |+++|++| ||... .+.|+..+.... .. ......++ .++
T Consensus 75 ~~~~~~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~~~~--------------~~----i~~~~~v~~~~~ 121 (220)
T 8pch_A 75 FEYIRYNKGIMGEDTY-------PYKGQ--------DDHCKFQPDKAI--------------AF----VKDVANITMNDE 121 (220)
T ss_dssp HHHHHHHTCEEBTTTS-------CCCSS--------CCCCCCCGGGEE--------------EC----EEEEEECCTTCH
T ss_pred HHHHHHcCCcCccccc-------CccCC--------CCCCCCCCCcce--------------EE----eCCEEEeCCCCH
Confidence 9999998 99999988 99875 566764321100 00 01123444 478
Q ss_pred HHHHHHHHHcCCeEEEEEecccccccCCceEEcCCCCC---CCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccc
Q psy1664 253 ETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGGP---LGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGE 329 (524)
Q Consensus 253 ~~ik~~l~~~GPV~v~i~v~~~f~~Y~sGIy~~~~~~~---~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe 329 (524)
++||++|+++|||+++|+++++|++|++|||..+.|.. .++|||+|||||++ ++++|||||||||++|||
T Consensus 122 ~~ik~~l~~~gPV~~~~~~~~~f~~Y~~Giy~~~~~~~~~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WGe 194 (220)
T 8pch_A 122 EAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEE-------NGIPYWIVKNSWGPQWGM 194 (220)
T ss_dssp HHHHHHHHHTCCEEEEECCCHHHHTCCSSEECCSSCCCSTTTCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTB
T ss_pred HHHHHHHHhcCCEEEEEEeccchhhcCCCcccCCcCCCCCCcCCcEEEEEEEEcc-------CCeeEEEEECCCCcCccc
Confidence 99999999999999999999999999999999887654 58999999999976 478999999999999999
Q ss_pred cCccccccccCccCCcCcCCcCCC
Q psy1664 330 NGLFRIGCRPYEIPCERYMNGSRS 353 (524)
Q Consensus 330 ~Gy~ri~~~~~~~~c~~~~~~~~~ 353 (524)
+|||||+++.. .|++.+.+++|
T Consensus 195 ~Gy~~i~r~~n--~cgi~~~~~~~ 216 (220)
T 8pch_A 195 NGYFLIERGKN--MCGLAACASYP 216 (220)
T ss_dssp TTEEEEECSSC--GGGTTTSCEEE
T ss_pred CCEEEEEcCCC--ccccCCCceeE
Confidence 99999999864 69987766443
No 21
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=3.7e-54 Score=415.37 Aligned_cols=209 Identities=26% Similarity=0.518 Sum_probs=172.0
Q ss_pred CCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHHHH
Q psy1664 97 LPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKAWK 176 (524)
Q Consensus 97 lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a~~ 176 (524)
||++||||++ ++|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+.. +.||+||++..|++
T Consensus 1 lP~~~DwR~~----~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~--~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~ 73 (222)
T 3u8e_A 1 APASIDWRKK----GAVTSVKDQGACGMCWAFGATGAIEGIDAITTG--RLISVSEQQIVDCDTX-XXXXXGGDADDAFR 73 (222)
T ss_dssp CCSCEEGGGG----TCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHS--CCCCBCHHHHHHHCC-------CCCHHHHHH
T ss_pred CCCcCcCCcC----CCCCCcccCCCCccHHHHHHHHHHHHHHHHHcC--CCcccCHHHHHhccCc-ccccCCCCHHHHHH
Confidence 7999999999 899999999999999999999999999999986 4699999999999764 67999999999999
Q ss_pred HHHHh-CCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecCCCHHHH
Q psy1664 177 YWVTT-GIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPANEETI 255 (524)
Q Consensus 177 ~~~~~-Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 255 (524)
|++++ |+++|++| ||... .+.|...... . ..... ...++.++++|
T Consensus 74 ~~~~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~~----------~-----~~i~~----~~~v~~~~~~i 119 (222)
T 3u8e_A 74 WVITNGGIASDANY-------PYTGV--------DGTCDLNKPI----------A-----ARIDG----YTNVPNSSSAL 119 (222)
T ss_dssp HHHHHTCBCBTTTS-------CCCSS--------CCCCCCCSCC----------C-----BCCCE----EEECCSCHHHH
T ss_pred HHHHcCCccchhcC-------CCccc--------CCccccCCCC----------e-----EEEcc----EEEeCCcHHHH
Confidence 99999 99999888 99876 6677653221 0 01111 23455678899
Q ss_pred HHHHHHcCCeEEEEEecc-cccccCC-ceEEcCCCCC---CCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCccccc
Q psy1664 256 MREIFRHGPVEGSMTIYA-DMILYKT-GIYKHVAGGP---LGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGEN 330 (524)
Q Consensus 256 k~~l~~~GPV~v~i~v~~-~f~~Y~s-GIy~~~~~~~---~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~ 330 (524)
|++| .+|||+|+|+++. +|++|++ |||..+.|.. .++|||+|||||++. ++++|||||||||++|||+
T Consensus 120 ~~~l-~~GPV~v~i~~~~~~f~~Y~~~Giy~~~~~~~~~~~~~HaV~iVGyg~~~------~g~~yWivkNSWG~~WGe~ 192 (222)
T 3u8e_A 120 LDAV-AKQPVSVNIYTSSTSFQLYTGPGIFAGSSCSDDPATVDHTVLIVGYGSNG------TNADYWIVKNSWGTEWGID 192 (222)
T ss_dssp HHHH-HHSCEEEEECCCSHHHHTCCCSSCBCCTTCCCCGGGCCEEEEEEEEEESS------TTCEEEEEECSBCTTSTBT
T ss_pred HHHH-hCCCEEEEEEecChhhhcEeCCceECCCcccCCCCcCCEEEEEEEEeecC------CCCcEEEEECCCCCCcccC
Confidence 9998 6799999999985 8999999 9999866655 689999999999872 2689999999999999999
Q ss_pred CccccccccC--ccCCcCcCCcCCC
Q psy1664 331 GLFRIGCRPY--EIPCERYMNGSRS 353 (524)
Q Consensus 331 Gy~ri~~~~~--~~~c~~~~~~~~~ 353 (524)
|||||+|+.. ...|++.+.+++|
T Consensus 193 Gy~~i~r~~~~~~g~Cgi~~~~~~p 217 (222)
T 3u8e_A 193 GYILIRRNTNRPDGVCAIDAWGSYP 217 (222)
T ss_dssp TEEEEECSCSCTTCGGGTTSSCEEE
T ss_pred CEEEEEcCCCCCCCcCCccccceEE
Confidence 9999999865 2479988776655
No 22
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=7e-54 Score=412.66 Aligned_cols=210 Identities=30% Similarity=0.586 Sum_probs=176.6
Q ss_pred CCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhc-CC-CCCCCCCCChHHH
Q psy1664 97 LPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCC-KD-CGNGCQGGFHGKA 174 (524)
Q Consensus 97 lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~-~~-~~~gC~GG~~~~a 174 (524)
||++||||++ ++|+||||||.||||||||++++||++++++++ ..+.||+|+|+||+ .. .+.||+||++..|
T Consensus 2 lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~--~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a 75 (218)
T 3ovx_A 2 LPDSVDWREK----GCVTEVKYQGSCGACWAFSAVGALEAQLKLKTG--KLVSLSAQNLVDCSTEKYGNKGCNGGFMTTA 75 (218)
T ss_dssp CCSCEEGGGG----TCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHS--CCCCBCHHHHHHHSCGGGTCCGGGCCCHHHH
T ss_pred CCCCCCcccC----CCCCCCccCCCCccHHHHHHHHHHHHHHHHHcC--CccccCHHHheeccCCcCCCCCCCCCCHHHH
Confidence 8999999998 899999999999999999999999999999986 46899999999997 32 3579999999999
Q ss_pred HHHHHH-hCCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecC-CCH
Q psy1664 175 WKYWVT-TGIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLP-ANE 252 (524)
Q Consensus 175 ~~~~~~-~Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 252 (524)
++|+++ .|+++|++| ||... .+.|....... ......| ..++ .++
T Consensus 76 ~~~~~~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~~~--------------~~~i~~~----~~~~~~~~ 122 (218)
T 3ovx_A 76 FQYIIDNKGIDSDASY-------PYKAM--------DQKCQYDSKYR--------------AATCSKY----TELPYGRE 122 (218)
T ss_dssp HHHHHHHTCEEBTTTS-------CCCSS--------CCCCCCCGGGE--------------EECCCEE----EECCTTCH
T ss_pred HHHHHHhCCcCccccc-------CccCC--------CCcccCCCccc--------------eeeeccE----EEeCCCCH
Confidence 999976 699999888 99876 56676432110 0111112 2344 478
Q ss_pred HHHHHHHHHcCCeEEEEEec-ccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccC
Q psy1664 253 ETIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENG 331 (524)
Q Consensus 253 ~~ik~~l~~~GPV~v~i~v~-~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~G 331 (524)
++||++|+++|||+++|++. ++|++|++|||..+.|...++|||+|||||++ ++++|||||||||++|||+|
T Consensus 123 ~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~~HaV~iVGyg~~-------~g~~ywivkNSWG~~WG~~G 195 (218)
T 3ovx_A 123 DVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDL-------NGKEYWLVKNSWGHNFGEEG 195 (218)
T ss_dssp HHHHHHHHHTCCEEEEECCCSHHHHHCCSSEECCTTCCSCCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTT
T ss_pred HHHHHHHHhcCCEEEEEEecchhhhcccCceecCCCCCcccCcEEEEEEEecc-------CCceEEEEECCCCCccccCC
Confidence 99999999999999999997 58999999999998887789999999999987 46899999999999999999
Q ss_pred ccccccccCccCCcCcCCcCCC
Q psy1664 332 LFRIGCRPYEIPCERYMNGSRS 353 (524)
Q Consensus 332 y~ri~~~~~~~~c~~~~~~~~~ 353 (524)
||||+++.. ..|++...+++|
T Consensus 196 y~~i~~~~~-n~cgi~~~~~~p 216 (218)
T 3ovx_A 196 YIRMARNKG-NHCGIASFPSYP 216 (218)
T ss_dssp EEEEECSSS-SGGGTTTSCEEE
T ss_pred EEEEecCCC-CcccccCceeee
Confidence 999999762 369987766554
No 23
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=1.1e-53 Score=417.73 Aligned_cols=213 Identities=29% Similarity=0.531 Sum_probs=175.0
Q ss_pred CCCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHHH
Q psy1664 96 ELPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKAW 175 (524)
Q Consensus 96 ~lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a~ 175 (524)
+||++||||++ ++|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+. .+.||+||++..||
T Consensus 1 ~lP~~~DwR~~----g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g--~~~~LS~q~lvdC~~-~~~gC~GG~~~~a~ 73 (246)
T 2b1m_A 1 DAPESWDWSKK----GVITKVKFQGQCGSGWAFSATGAIEAAHAIATG--NLVSLSEQELIDCVD-ESEGCYNGWHYQSF 73 (246)
T ss_dssp -CCSCEEGGGT----TCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHS--CCCCBCHHHHHHHCT-TSBTTTBCCHHHHH
T ss_pred CCCCcCCCCCC----CCCCCcccCCCCchHHHHHHHHHHHHHHHHHcC--CCcccCHHHHHhhcC-CCCCCCCCCHHHHH
Confidence 48999999998 899999999999999999999999999999886 469999999999975 46799999999999
Q ss_pred HHHHHh-CCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecC-CCHH
Q psy1664 176 KYWVTT-GIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLP-ANEE 253 (524)
Q Consensus 176 ~~~~~~-Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 253 (524)
+|++++ |+++|++| ||... .+.|+...... . .....|+. ...++ .+++
T Consensus 74 ~y~~~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~~~---------~-----~~i~~y~~-~~~v~~~~~~ 123 (246)
T 2b1m_A 74 EWVVKHGGIASEADY-------PYKAR--------DGKCKANEIQD---------K-----VTIDNYGV-QILSNESTES 123 (246)
T ss_dssp HHHHHTTCBCBTTTS-------CCCSS--------CCCCCGGGCCC---------C-----BCCSEEEE-EECCTTSCHH
T ss_pred HHHHHhCCcCccccc-------cccCC--------CCcCcCCCCCC---------c-----eeEcCcce-eeecCCChHH
Confidence 999998 99998888 99876 56676431100 0 01112211 03455 4788
Q ss_pred HHHHHHHH---cCCeEEEEEecccccccCCceEEcCCCCCC--CCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCccc
Q psy1664 254 TIMREIFR---HGPVEGSMTIYADMILYKTGIYKHVAGGPL--GEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWG 328 (524)
Q Consensus 254 ~ik~~l~~---~GPV~v~i~v~~~f~~Y~sGIy~~~~~~~~--~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WG 328 (524)
+||++|++ +|||+|+|++ ++|++|++|||..+.|... ++|||+|||||++ ++++|||||||||++||
T Consensus 124 ~ik~~l~~~~~~GPV~v~i~~-~~f~~Y~~Giy~~~~c~~~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WG 195 (246)
T 2b1m_A 124 EAESSLQSFVLEQPISVSIDA-KDFHFYSGGIYDGGNCSSPYGINHFVLIVGYGSE-------DGVDYWIAKNSWGEDWG 195 (246)
T ss_dssp HHHHHHHHHHHHSCEEEEECC-TTGGGCCSSEECCTTCCSSCCCCEEEEEEEEEEE-------TTEEEEEEECSBCTTST
T ss_pred HHHHHHHhhccCCCEEEEEEc-chhhcccceeecCCCCCCCCcCceEEEEEEEecc-------CCceEEEEEeCCCCccc
Confidence 99999999 6999999999 9999999999998666554 8999999999986 46899999999999999
Q ss_pred ccCccccccccC--ccCCcCcCCcCCC
Q psy1664 329 ENGLFRIGCRPY--EIPCERYMNGSRS 353 (524)
Q Consensus 329 e~Gy~ri~~~~~--~~~c~~~~~~~~~ 353 (524)
|+|||||+++.. ...|++.+.+++|
T Consensus 196 e~Gy~~i~~~~~~~~n~CgI~~~~~~p 222 (246)
T 2b1m_A 196 IDGYIRIQRNTGNLLGVCGMNYFASYP 222 (246)
T ss_dssp BTTEEEEECCSSCTTCGGGTTSEEEEE
T ss_pred CCcEEEEEcCCCCCCccccccceeeEE
Confidence 999999999762 1368887655444
No 24
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=1.4e-53 Score=410.82 Aligned_cols=209 Identities=30% Similarity=0.584 Sum_probs=173.2
Q ss_pred CCCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHHH
Q psy1664 96 ELPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKAW 175 (524)
Q Consensus 96 ~lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a~ 175 (524)
+||++||||++ ++|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+.. +.||+||++..||
T Consensus 2 ~lP~~~DwR~~----~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~--~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~ 74 (221)
T 1cqd_A 2 DLPDSIDWREN----GAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTG--DLISLSEQQLVDCTTA-NHGCRGGWMNPAF 74 (221)
T ss_dssp -CCSCEETTTT----TCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHS--CCCCBCHHHHHHHCTT-SCTTBCCCHHHHH
T ss_pred CCCCcCcCCCC----CCcCCcccCCCCccHHHHHHHHHHHHHHHHhcC--CeeeeccceeEECCCC-CCCCCCCCHHHHH
Confidence 69999999998 889999999999999999999999999999986 4689999999999754 6799999999999
Q ss_pred HHHHHh-CCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecCC-CHH
Q psy1664 176 KYWVTT-GIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPA-NEE 253 (524)
Q Consensus 176 ~~~~~~-Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 253 (524)
+|++++ |+++|++| ||... .+.|....... .+ ....| ..++. +++
T Consensus 75 ~y~~~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~~~---------~~-----~i~~y----~~v~~~~~~ 121 (221)
T 1cqd_A 75 QFIVNNGGINSEETY-------PYRGQ--------DGICNSTVNAP---------VV-----SIDSY----ENVPSHNEQ 121 (221)
T ss_dssp HHHHHHTSBCBTTTS-------CCCSS--------CCCCCSSSCCC---------SB-----CCSEE----EECCSSCHH
T ss_pred HHHHHhCCccccccC-------CccCC--------CCCcCCCCCCc---------eE-----EeccE----EEeCCchHH
Confidence 999987 99999888 99875 56676432110 00 11111 23444 588
Q ss_pred HHHHHHHHcCCeEEEEEec-ccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCc
Q psy1664 254 TIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGL 332 (524)
Q Consensus 254 ~ik~~l~~~GPV~v~i~v~-~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy 332 (524)
+||++|++ |||+|+|+++ ++|++|++|||+.+ |...++|||+|||||++ ++++|||||||||++|||+||
T Consensus 122 ~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~~-~~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WGe~Gy 192 (221)
T 1cqd_A 122 SLQKAVAN-QPVSVTMDAAGRDFQLYRSGIFTGS-CNISANHALTVVGYGTE-------NDKDFWIVKNSWGKNWGESGY 192 (221)
T ss_dssp HHHHHHTT-SCEEEEECCCSHHHHTCCSSEECCC-CCCCCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTE
T ss_pred HHHHHHHh-CCEEEEEeccCcccccccCccccCC-CCCcCCeEEEEEEEccc-------CCCcEEEEEeCCCCCcccCCE
Confidence 89988865 9999999998 79999999999875 55578999999999986 478999999999999999999
Q ss_pred cccccccC--ccCCcCcCCcCCC
Q psy1664 333 FRIGCRPY--EIPCERYMNGSRS 353 (524)
Q Consensus 333 ~ri~~~~~--~~~c~~~~~~~~~ 353 (524)
|||+++.. ...|++...+++|
T Consensus 193 ~~i~r~~~~~~~~Cgi~~~~~~p 215 (221)
T 1cqd_A 193 IRAERNIENPDGKCGITRFASYP 215 (221)
T ss_dssp EEEECSCSSTTCGGGTTSSCEEE
T ss_pred EEEEcCCCCCCcccceeeeeeEE
Confidence 99999753 2469887766555
No 25
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=5.7e-54 Score=413.60 Aligned_cols=210 Identities=30% Similarity=0.572 Sum_probs=172.9
Q ss_pred CCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCC-CCCCCCCChHHHH
Q psy1664 97 LPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDC-GNGCQGGFHGKAW 175 (524)
Q Consensus 97 lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~-~~gC~GG~~~~a~ 175 (524)
||++||||++ +.|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+... +.||+||++..|+
T Consensus 1 lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~--~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~ 74 (220)
T 3p5u_A 1 LPDYVDWRSS----GAVVDIKDQGQCGSAWAFSTIAAVEGINKIATG--DLISLSEQELVDCGRTQNTRGCDGGFMTDGF 74 (220)
T ss_dssp CCSCEETTTT----TCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHS--CCCCBCHHHHHHHCCCSSCCTTBCCCHHHHH
T ss_pred CCCCCcCCcC----CCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcC--CCCCcCHhHcEECCCCCCCCCCCCCCHHHHH
Confidence 7999999998 889999999999999999999999999999986 46899999999998654 5699999999999
Q ss_pred HHHHHh-CCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecC-CCHH
Q psy1664 176 KYWVTT-GIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLP-ANEE 253 (524)
Q Consensus 176 ~~~~~~-Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 253 (524)
+|++++ |+++|++| ||... .+.|....... . ...... ...++ .+++
T Consensus 75 ~~~~~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~~~--------~-----~~~i~~----~~~v~~~~~~ 122 (220)
T 3p5u_A 75 QFIINNGGINTEANY-------PYTAE--------EGQCNLDLQQE--------K-----YVSIDT----YENVPYNNEW 122 (220)
T ss_dssp HHHHHHTCBCBTTTS-------CCCSS--------CCCCCHHHHTC--------C-----SBCCCE----EEECCTTCHH
T ss_pred HHHHHhCCcCccccc-------ccccC--------CCCcCcCCCCC--------c-----eEEEcc----EEEeCCCcHH
Confidence 999988 89998888 99876 55665321100 0 001111 23454 3567
Q ss_pred HHHHHHHHcCCeEEEEEec-ccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCc
Q psy1664 254 TIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGL 332 (524)
Q Consensus 254 ~ik~~l~~~GPV~v~i~v~-~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy 332 (524)
+|+++| ++|||+|+|+++ ++|++|++|||..+ |...++|||+|||||++ ++++|||||||||++|||+||
T Consensus 123 ~l~~~l-~~GPV~v~~~~~~~~f~~Y~~Giy~~~-~~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WGe~Gy 193 (220)
T 3p5u_A 123 ALQTAV-AYQPVSVALEAAGYNFQHYSSGIFTGP-CGTAVDHAVTIVGYGTE-------GGIDYWIVKNSWGTTWGEEGY 193 (220)
T ss_dssp HHHHHH-TTSCEEEEECCCSHHHHTCCSSEECCC-CCCSCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTE
T ss_pred HHHHHH-hcCCEEEEEecCchhhccccCceECCC-CCCccceEEEEEEEecC-------CCceEEEEECCCCCCcccCCE
Confidence 777777 789999999997 68999999999874 55568999999999976 578999999999999999999
Q ss_pred cccccccC-ccCCcCcCCcCCC
Q psy1664 333 FRIGCRPY-EIPCERYMNGSRS 353 (524)
Q Consensus 333 ~ri~~~~~-~~~c~~~~~~~~~ 353 (524)
|||+|+.. ...|++.+.+++|
T Consensus 194 ~~i~r~~~~~~~Cgi~~~~~~p 215 (220)
T 3p5u_A 194 MRIQRNVGGVGQCGIAKKASYP 215 (220)
T ss_dssp EEEECCCCTTCGGGTTSSCEEE
T ss_pred EEEECCCCCCCccCcccccceE
Confidence 99999865 3479998776555
No 26
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=2.1e-53 Score=407.83 Aligned_cols=207 Identities=29% Similarity=0.522 Sum_probs=172.0
Q ss_pred CCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHHHH
Q psy1664 97 LPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKAWK 176 (524)
Q Consensus 97 lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a~~ 176 (524)
||++||||++ ++|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+.. +.||+||++..||+
T Consensus 1 lP~~~DwR~~----~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g--~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~ 73 (215)
T 1iwd_A 1 LPSFVDWRSK----GAVNSIKNQKQCGSCWAFSAVAAVESINKIRTG--QLISLSEQELVDCDTA-SHGCNGGWMNNAFQ 73 (215)
T ss_dssp CCSCEEGGGG----TCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHS--CCCCBCHHHHHHHCTT-SCTTBCCCHHHHHH
T ss_pred CCCcEeCCCC----CCCCCcccCCCCchHHHHHHHHHHHHHHHHhcC--CccccChhHeEECcCC-CCCCCCCCHHHHHH
Confidence 7999999998 899999999999999999999999999999875 4699999999999753 67999999999999
Q ss_pred HHHHh-CCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecC-CCHHH
Q psy1664 177 YWVTT-GIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLP-ANEET 254 (524)
Q Consensus 177 ~~~~~-Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 254 (524)
|++++ |+++|++| ||... .+.|..... ..+ ....| ..++ .++++
T Consensus 74 ~~~~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~----------~~~-----~i~~~----~~v~~~~~~~ 119 (215)
T 1iwd_A 74 YIITNGGIDTQQNY-------PYSAV--------QGSCKPYRL----------RVV-----SINGF----QRVTRNNESA 119 (215)
T ss_dssp HHHHHTCBCBTTTS-------CCCSS--------CCCCCTTCC----------CCB-----CCCEE----EECCTTCHHH
T ss_pred HHHHhCCccccccc-------CccCC--------CCCCCCCCC----------ceE-----EeCcE----EEeCCCcHHH
Confidence 99997 99999888 99875 567764321 000 11111 2344 36788
Q ss_pred HHHHHHHcCCeEEEEEecc-cccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCcc
Q psy1664 255 IMREIFRHGPVEGSMTIYA-DMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLF 333 (524)
Q Consensus 255 ik~~l~~~GPV~v~i~v~~-~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy~ 333 (524)
||++|++ |||+|+|+++. +|++|++|||..+ |...++|||+|||||++ ++++|||||||||++|||+|||
T Consensus 120 ik~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~~-c~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WGe~Gy~ 190 (215)
T 1iwd_A 120 LQSAVAS-QPVSVTVEAAGAPFQHYSSGIFTGP-CGTAQNHGVVIVGYGTQ-------SGKNYWIVRNSWGQNWGNQGYI 190 (215)
T ss_dssp HHHHHHH-SCEEEEECCCSHHHHTCCSSEECCC-CCCCCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTEE
T ss_pred HHHHHHh-CCEEEEEecCCcchhhcCCceECCC-CCCcCCEEEEEEEEecc-------CCccEEEEEeCCCCCcCCCcEE
Confidence 8888875 99999999986 8999999999875 44578999999999986 4789999999999999999999
Q ss_pred ccccccC--ccCCcCcCCcCCC
Q psy1664 334 RIGCRPY--EIPCERYMNGSRS 353 (524)
Q Consensus 334 ri~~~~~--~~~c~~~~~~~~~ 353 (524)
||+++.. ...|++...+++|
T Consensus 191 ~i~~~~~~~~~~Cgi~~~~~~p 212 (215)
T 1iwd_A 191 WMERNVASSAGLCGIAQLPSYP 212 (215)
T ss_dssp EEECSCSSTTCGGGTTSSCEEE
T ss_pred EEEcCCCCCCCCCCccccceee
Confidence 9999752 2468887665444
No 27
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=1.4e-53 Score=410.10 Aligned_cols=209 Identities=24% Similarity=0.545 Sum_probs=172.4
Q ss_pred CCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHHHH
Q psy1664 97 LPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKAWK 176 (524)
Q Consensus 97 lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a~~ 176 (524)
||++||||++ +.|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+ ..+.||+||++..||+
T Consensus 1 lP~~~DwR~~----~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g--~~~~lS~q~l~dC~-~~~~gC~GG~~~~a~~ 73 (218)
T 1yal_A 1 YPQSIDWRAK----GAVTPVKNQGACGSCWAFSTIATVEGINKIVTG--NLLELSEQELVDCD-KHSYGCKGGYQTTSLQ 73 (218)
T ss_dssp CCSCEETTTT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHS--CCCCBCHHHHHHHC-TTSCTTBCCCHHHHHH
T ss_pred CCCcCcCCCC----CCCCCCccCccchhHHHHHHHHHHHHHHHHhcC--CccccCHHHHHHhc-CCCCCCCCCCHHHHHH
Confidence 7999999998 889999999999999999999999999999886 46999999999997 3467999999999999
Q ss_pred HHHHhCCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecCC-CHHHH
Q psy1664 177 YWVTTGIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPA-NEETI 255 (524)
Q Consensus 177 ~~~~~Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i 255 (524)
|++++|+++|++| ||... .+.|+...... ..+ ....| ..++. ++++|
T Consensus 74 ~~~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~~~--------~~~-----~i~~y----~~v~~~~~~~i 121 (218)
T 1yal_A 74 YVANNGVHTSKVY-------PYQAK--------QYKCRATDKPG--------PKV-----KITGY----KRVPSNCETSF 121 (218)
T ss_dssp HHHHHCBCBTTTS-------CCCSS--------CCCCCGGGCCS--------CCB-----CCSEE----EECCSSBHHHH
T ss_pred HHHHcCCCccccc-------cccCC--------CCCcccCcCCC--------ceE-----EEeeE----EEeCCCCHHHH
Confidence 9999999998888 99875 56676432100 000 11111 23453 67888
Q ss_pred HHHHHHcCCeEEEEEec-ccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCccc
Q psy1664 256 MREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLFR 334 (524)
Q Consensus 256 k~~l~~~GPV~v~i~v~-~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy~r 334 (524)
|++|++ |||+|+|+++ ++|++|++|||+.+ |...++|||+|||||++ ++++|||||||||++|||+||||
T Consensus 122 ~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~~-~~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WGe~Gy~~ 192 (218)
T 1yal_A 122 LGALAN-QPLSVLVEAGGKPFQLYKSGVFDGP-CGTKLDHAVTAVGYGTS-------DGKNYIIIKNSWGPNWGEKGYMR 192 (218)
T ss_dssp HHHHTT-SCEEEEECCCSHHHHTCCSSEECCS-CCSCCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTEEE
T ss_pred HHHHHh-CCEEEEEeccchhccccCCceECCC-CCCCCCEEEEEEEeecc-------CCccEEEEEeCCCCCcccCcEEE
Confidence 888876 9999999997 79999999999875 45568999999999987 46899999999999999999999
Q ss_pred cccccC--ccCCcCcCCcCCC
Q psy1664 335 IGCRPY--EIPCERYMNGSRS 353 (524)
Q Consensus 335 i~~~~~--~~~c~~~~~~~~~ 353 (524)
|+++.. ...|++...+++|
T Consensus 193 i~~~~~~~~~~Cgi~~~~~~p 213 (218)
T 1yal_A 193 LKRQSGNSQGTCGVYKSSYYP 213 (218)
T ss_dssp EECCCSBSCCGGGTTSSCEEE
T ss_pred EECCCCCCCCccccccceeeE
Confidence 999752 2468887766554
No 28
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=1.2e-53 Score=409.10 Aligned_cols=206 Identities=28% Similarity=0.505 Sum_probs=172.1
Q ss_pred CCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHHHH
Q psy1664 97 LPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKAWK 176 (524)
Q Consensus 97 lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a~~ 176 (524)
||++||||++ ++|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+. .+.||+||++..|++
T Consensus 1 lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~--~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~ 73 (213)
T 3ioq_A 1 IPTSIDWRQK----GAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTG--QLLSLSEQELLDCER-RSYGCRGGFPLYALQ 73 (213)
T ss_dssp CCSCEEGGGG----TCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHS--CCCCBCHHHHHHHCT-TSCTTBCCCHHHHHH
T ss_pred CCCCCCcccC----CCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcC--CCcccCHHHhhhhcC-CCCCCCCCCHHHHHH
Confidence 7999999999 899999999999999999999999999999986 469999999999975 467999999999999
Q ss_pred HHHHhCCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecCCCHHHHH
Q psy1664 177 YWVTTGIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPANEETIM 256 (524)
Q Consensus 177 ~~~~~Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik 256 (524)
|++++|+++|++| ||... .+.|........ . .+.. ....++.++++++
T Consensus 74 ~~~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~~~~--------~-----~~i~----~~~~v~~~~~~~~ 121 (213)
T 3ioq_A 74 YVANSGIHLRQYY-------PYEGV--------QRQCRASQAKGP--------K-----VKTD----GVGRVPRNNEQAL 121 (213)
T ss_dssp HHHHHCEEBGGGS-------CCCSS--------CCCCCGGGCCSC--------E-----ECCC----EEEECCSSCHHHH
T ss_pred HHHHcCCCchhcc-------CcCCC--------CCCCCCCccCCc--------e-----EEec----cEEEeCCchHHHH
Confidence 9999999999999 99865 566754211100 0 0111 1235566667777
Q ss_pred HHHHHcCCeEEEEEec-ccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCcccc
Q psy1664 257 REIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLFRI 335 (524)
Q Consensus 257 ~~l~~~GPV~v~i~v~-~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy~ri 335 (524)
++++.+|||+|+|+++ ++|+.|++|||.. .|...++|||+|||||+ +|||||||||++|||+|||||
T Consensus 122 ~~~~~~GPV~v~i~~~~~~f~~y~~Giy~~-~~~~~~~HaV~iVGyg~-----------~yWivkNSWG~~WGe~Gy~~i 189 (213)
T 3ioq_A 122 IQRIAIQPVSIVVEAKGRAFQNYRGGIFAG-PCGTSIDHAVAAVGYGN-----------DYILIKNSWGTGWGEGGYIRI 189 (213)
T ss_dssp HHHHTTSCEEEEECCCSHHHHTCCSSEECC-SCCSCCCEEEEEEEEET-----------TEEEEECSBCTTSTBTTEEEE
T ss_pred HHHHHhCCEEEEEEechhhhhhccCCeEcC-CCCCccCceEEEEecCC-----------CeEEEECCCCCCcccCCeEEE
Confidence 7888889999999998 7999999999988 45667899999999994 699999999999999999999
Q ss_pred ccccC--ccCCcCcCCcCCC
Q psy1664 336 GCRPY--EIPCERYMNGSRS 353 (524)
Q Consensus 336 ~~~~~--~~~c~~~~~~~~~ 353 (524)
+|+.. ...|++.+.+++|
T Consensus 190 ~r~~~~~~~~Cgi~~~~~~p 209 (213)
T 3ioq_A 190 KRGSGNPQGACGVLSDSVFP 209 (213)
T ss_dssp ESSCSSTTCGGGTTSCCEEE
T ss_pred EcCCCCCCCcccccCcceEe
Confidence 99763 2479988766554
No 29
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=1.1e-53 Score=420.03 Aligned_cols=216 Identities=26% Similarity=0.551 Sum_probs=175.0
Q ss_pred CCCCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHH
Q psy1664 95 EELPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKA 174 (524)
Q Consensus 95 ~~lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a 174 (524)
.+||++||||++ ++|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+...+.||+||++..|
T Consensus 2 ~~lP~~~DwR~~----g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g--~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a 75 (262)
T 2fo5_A 2 SDLPPSVDWRQK----GAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTG--SLVSLSEQELIDCDTADNDGCQGGLMDNA 75 (262)
T ss_dssp -CCCSCEETTTT----TCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHS--CCCCBCHHHHHHHCCSSCCGGGCBCHHHH
T ss_pred CCCCCcccCCCC----CCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcC--CCCCcCHHHHHhhcCCCCCCCCCCCHHHH
Confidence 469999999998 899999999999999999999999999999986 46999999999998645679999999999
Q ss_pred HHHHHHh-CCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecC-CCH
Q psy1664 175 WKYWVTT-GIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLP-ANE 252 (524)
Q Consensus 175 ~~~~~~~-Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 252 (524)
|+|++++ |+++|++| ||... .+.|+.... ....+ + ...... ...++ .++
T Consensus 76 ~~yi~~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~------~~~~~-~---~~~i~~----y~~v~~~~e 126 (262)
T 2fo5_A 76 FEYIKNNGGLITEAAY-------PYRAA--------RGTCNVARA------AQNSP-V---VVHIDG----HQDVPANSE 126 (262)
T ss_dssp HHHHHHTTCEEBTTTS-------CCCSS--------CCCCCHHHH------HHHCC-C---EECCCE----EEECCTTCH
T ss_pred HHHHHHcCCcCchhcC-------CCcCc--------cCccCCccc------ccCCc-e---eEEece----EEEcCCchH
Confidence 9999998 99998888 99875 566753210 00000 0 001111 23455 367
Q ss_pred HHHHHHHHHcCCeEEEEEec-ccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccC
Q psy1664 253 ETIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENG 331 (524)
Q Consensus 253 ~~ik~~l~~~GPV~v~i~v~-~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~G 331 (524)
+.||++|++ |||+|+|+++ ++|++|++|||..+ |...++|||+|||||++. ++++|||||||||++|||+|
T Consensus 127 ~~ik~al~~-GPV~v~i~~~~~~f~~Y~sGVy~~~-c~~~~~HaV~IVGyg~~~------~G~~YWivkNSWG~~WGe~G 198 (262)
T 2fo5_A 127 EDLARAVAN-QPVSVAVEASGKAFMFYSEGVFTGE-CGTELDHGVAVVGYGVAE------DGKAYWTVKNSWGPSWGEQG 198 (262)
T ss_dssp HHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECCC-CCCCCCEEEEEEEEEECT------TSCEEEEEECSBCTTSTBTT
T ss_pred HHHHHHHHh-CCEEEEEecChHHHhccCCceECCC-CCCcCCEEEEEEEEcccC------CCceEEEEEeCCCCCCCCCe
Confidence 788888876 9999999998 79999999999875 445679999999999873 46899999999999999999
Q ss_pred ccccccccCc--cCCcCcCCcCCC
Q psy1664 332 LFRIGCRPYE--IPCERYMNGSRS 353 (524)
Q Consensus 332 y~ri~~~~~~--~~c~~~~~~~~~ 353 (524)
||||+++..+ ..|++.+.+++|
T Consensus 199 Y~ri~r~~n~~~~~CgI~~~~~~p 222 (262)
T 2fo5_A 199 YIRVEKDSGASGGLCGIAMEASYP 222 (262)
T ss_dssp EEEEESSCSCTTCGGGTTTSCEEE
T ss_pred EEEEEcCCCCCCCccceeeeeeEE
Confidence 9999998653 469997766555
No 30
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=2.1e-53 Score=410.38 Aligned_cols=207 Identities=26% Similarity=0.443 Sum_probs=173.5
Q ss_pred CCCCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHH
Q psy1664 95 EELPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKA 174 (524)
Q Consensus 95 ~~lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a 174 (524)
.+||++||||++ ++|+||||||.||||||||++++||++++++++ ..+.||+|+|+||+. +.||+||++..|
T Consensus 8 ~~lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~--~~~~lS~q~l~dc~~--~~gC~GG~~~~a 79 (222)
T 3f5v_A 8 GNAPAEIDLRQM----RTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQ--QSLDLAEQELVDCAS--QHGCHGDTIPRG 79 (222)
T ss_dssp CCCCSCEEHHHH----TCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHC--CCCCBCHHHHHHHTC--SSTTBCCCHHHH
T ss_pred cCCCCCCCCccC----CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcC--CCCCcCHHHHHhCcC--CCCCCCCCHHHH
Confidence 479999999998 899999999999999999999999999999876 469999999999976 679999999999
Q ss_pred HHHHHHhCCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeec-CCCHH
Q psy1664 175 WKYWVTTGIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSL-PANEE 253 (524)
Q Consensus 175 ~~~~~~~Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 253 (524)
++|++++|+++|++| ||... .+.|+.. ... .+ +... ...+ +.+++
T Consensus 80 ~~~~~~~Gi~~e~~y-------PY~~~--------~~~C~~~-~~~---------~~-----~i~~----~~~v~~~~~~ 125 (222)
T 3f5v_A 80 IEYIQHNGVVQESYY-------RYVAR--------EQSCRRP-NAQ---------RF-----GISN----YCQIYPPNAN 125 (222)
T ss_dssp HHHHHHHCEEBGGGS-------CCCSS--------CCCCCCC-SSC---------EE-----CCSE----EEECCSCCHH
T ss_pred HHHHHHcCCCchhhC-------CCccc--------CCCccCC-cCc---------ce-----eecc----EEEeCCCCHH
Confidence 999999999999988 99876 5667621 100 00 1111 1234 45789
Q ss_pred HHHHHHHH-cCCeEEEEEe--cccccccCCceEEcCC-CCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccc
Q psy1664 254 TIMREIFR-HGPVEGSMTI--YADMILYKTGIYKHVA-GGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGE 329 (524)
Q Consensus 254 ~ik~~l~~-~GPV~v~i~v--~~~f~~Y~sGIy~~~~-~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe 329 (524)
+||++|++ +|||+|+|.+ .++|++|++|||.... +...++|||+|||||++ ++++|||||||||++|||
T Consensus 126 ~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~~gi~~~~~~~~~~~~HaV~iVGyg~~-------~g~~ywivkNSWG~~WGe 198 (222)
T 3f5v_A 126 KIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDNGYQPNYHAVNIVGYSNA-------QGVDYWIVRNSWDTNWGD 198 (222)
T ss_dssp HHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCCCCSSSCEEEEEEEEEEEEE-------TTEEEEEEECSBCTTSTB
T ss_pred HHHHHHHhcCCCEEEEEEeccchhhhccCCCceecCCCCCCccCcEEEEEEEecc-------CCCEEEEEEcCCCCCccc
Confidence 99999999 9999999999 4689999999876544 45678999999999986 478999999999999999
Q ss_pred cCccccccccCccCCcCcCCcCC
Q psy1664 330 NGLFRIGCRPYEIPCERYMNGSR 352 (524)
Q Consensus 330 ~Gy~ri~~~~~~~~c~~~~~~~~ 352 (524)
+|||||+++.. .|++...+.+
T Consensus 199 ~Gy~~i~r~~n--~cgi~~~~~~ 219 (222)
T 3f5v_A 199 NGYGYFAANID--LMMIEEYPYV 219 (222)
T ss_dssp TTEEEEECSSC--GGGTTTSCEE
T ss_pred CCEEEEEcCCC--eecCCCceeE
Confidence 99999999854 6888765533
No 31
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=4.5e-53 Score=420.16 Aligned_cols=233 Identities=29% Similarity=0.533 Sum_probs=183.8
Q ss_pred CCCCCCccccccCCCCCCCCccCCCCC---CCccHHHHHHHHHHHHHHHHHcCCCc-cccCCHHHHHhhcCCCCCCCCCC
Q psy1664 94 LEELPEGFDARINWPYCPTIQEIRDQG---SCGSGWALGAVEAMSDRVCIASRGKR-HVRLSSDDLVSCCKDCGNGCQGG 169 (524)
Q Consensus 94 ~~~lP~s~DwR~~~~~~g~vtpvkdQg---~CGsCwAfA~~~~le~~~~i~~~~~~-~~~LS~q~lvdC~~~~~~gC~GG 169 (524)
..+||++||||++. .+++|+|||||| .||||||||++++||++++|++++.. .+.||+|+|+||+.. .||+||
T Consensus 33 ~~~lP~~~DwR~~~-~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~~--~gC~GG 109 (277)
T 1deu_A 33 PADLPKSWDWRNVD-GVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGNA--GSCEGG 109 (277)
T ss_dssp GGGSCSCEETTSBT-TBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSSS--EETBEE
T ss_pred cccCCCceecccCC-CCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcCC--CCCCCC
Confidence 35799999999972 235799999999 99999999999999999999986542 479999999999753 799999
Q ss_pred ChHHHHHHHHHhCCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecC
Q psy1664 170 FHGKAWKYWVTTGIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLP 249 (524)
Q Consensus 170 ~~~~a~~~~~~~Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (524)
++..||+|++++|+++|+.| ||... ...|... ..| ..
T Consensus 110 ~~~~a~~yi~~~Gi~~e~~y-------PY~~~--------~~~C~~~----~~~-~~----------------------- 146 (277)
T 1deu_A 110 NDLSVWDYAHQHGIPDETCN-------NYQAK--------DQECDKF----NQC-GT----------------------- 146 (277)
T ss_dssp CHHHHHHHHHHTCBCBGGGS-------CCCSS--------CCCCCHH----HHS-EE-----------------------
T ss_pred CHHHHHHHHHHcCCCcCccC-------CCcCC--------CCCcccc----ccc-cc-----------------------
Confidence 99999999999999998888 99865 3344210 000 00
Q ss_pred CCHHHHHHHHHHcCCeEEEEEecccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccc
Q psy1664 250 ANEETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGE 329 (524)
Q Consensus 250 ~~~~~ik~~l~~~GPV~v~i~v~~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe 329 (524)
T Consensus 147 -------------------------------------------------------------------------------- 146 (277)
T 1deu_A 147 -------------------------------------------------------------------------------- 146 (277)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCccccccccCccCCcCcCCcCCCCCCCCCCCCcccccccccCccccccCcceeeeEEEEcCCCHHHHHHHHHhCCCEEE
Q psy1664 330 NGLFRIGCRPYEIPCERYMNGSRSSCQANEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPANEETIMREIFRHGPVEG 409 (524)
Q Consensus 330 ~Gy~ri~~~~~~~~c~~~~~~~~~~C~~~~~~~p~C~~~C~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~gPv~~ 409 (524)
|. +.. .|.... .+. ......+..+ .++++||++|+++|||++
T Consensus 147 -------------------------~~----~~~----~c~~~~--~~~--~~~i~~y~~v-~~~~~i~~~i~~~GPV~v 188 (277)
T 1deu_A 147 -------------------------CN----EFK----ECHAIR--NYT--LWRVGDYGSL-SGREKMMAEIYANGPISC 188 (277)
T ss_dssp -------------------------EE----ETT----EEEECS--SCC--CBCEEEEEEE-CSHHHHHHHHHHHCCEEE
T ss_pred -------------------------cc----cCc----cccccc--Ccc--eEEeceeEec-CCHHHHHHHHHHcCCEEE
Confidence 00 000 000000 000 0111122233 368899999999999999
Q ss_pred EEecccccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEcCCCCCCCCCcEEEEEeCCC-------
Q psy1664 410 SMTIYADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLFRIVRGQN------- 482 (524)
Q Consensus 410 ~~~~~~~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~NSWG~~WG~~Gy~~i~~g~~------- 482 (524)
+|+++++|++|++|||..+++...++|||+|||||+++ +++|||||||||++||++|||||+||.|
T Consensus 189 ~i~~~~~f~~Y~~GIy~~~~~~~~~~HaV~iVGyg~~~-------g~~YWivkNSWG~~WGe~GY~~i~rg~n~~g~g~~ 261 (277)
T 1deu_A 189 GIMATERLANYTGGIYAEYQDTTYINHVVSVAGWGISD-------GTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGAR 261 (277)
T ss_dssp EECCCHHHHTCCSSEECBCCSCCCCCEEEEEEEEEEET-------TEEEEEEECSBCTTSTBTTEEEEECTTHHHHTGGG
T ss_pred EEecccccccCcCcEECCCCCCCcCCeEEEEEEecccC-------CccEEEEEeCCCCccCCCcEEEEEcCCCccccccc
Confidence 99998899999999998876666789999999999886 8899999999999999999999999998
Q ss_pred -ccCccccceecccee
Q psy1664 483 -ECGIEADITAGLPKI 497 (524)
Q Consensus 483 -~cgi~~~~~~~~p~~ 497 (524)
.||||+++++++|.+
T Consensus 262 ~~cgIe~~~~~~~p~~ 277 (277)
T 1deu_A 262 YNLAIEEHCTFGDPIV 277 (277)
T ss_dssp TBTTTTSCEEEEEECC
T ss_pred ccceeccccEeecccC
Confidence 999999999999974
No 32
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=3.3e-53 Score=410.32 Aligned_cols=212 Identities=29% Similarity=0.579 Sum_probs=173.2
Q ss_pred CCCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHHH
Q psy1664 96 ELPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKAW 175 (524)
Q Consensus 96 ~lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a~ 175 (524)
+||++||||++ ++|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+...+.||+||++..||
T Consensus 1 ~lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g--~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~ 74 (229)
T 1s4v_A 1 TVPASVDWRKK----GAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTN--KLVSLSEQELVDCDTDQNQGCNGGLMDYAF 74 (229)
T ss_dssp CCCSCEETTTT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHS--CCCCBCHHHHHHHCCSSCCTTBCBCHHHHH
T ss_pred CCCCCEeCCCC----CCCCCCccCccchHHHHHHHHHHHHHHHHHHcC--CCCCcCHHHHHhhCCCCCCCCCCCCHHHHH
Confidence 48999999998 889999999999999999999999999999886 468999999999985456799999999999
Q ss_pred HHHHHh-CCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecCC-CHH
Q psy1664 176 KYWVTT-GIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPA-NEE 253 (524)
Q Consensus 176 ~~~~~~-Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 253 (524)
+|++++ |+++|++| ||... .+.|....... .. ..... ...++. +++
T Consensus 75 ~y~~~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~~~--------~~-----~~i~~----y~~v~~~~~~ 122 (229)
T 1s4v_A 75 EFIKQRGGITTEANY-------PYEAY--------DGTCDVSKENA--------PA-----VSIDG----HENVPENDEN 122 (229)
T ss_dssp HHHHHHTCBCBTTTS-------CCCSS--------CCCCCHHHHTC--------CC-----BCCCE----EEECCTTCHH
T ss_pred HHHHHhCCccccccC-------CccCC--------CCCCCCCCCCC--------cE-----EEeee----EEEeCCccHH
Confidence 999998 99998888 99875 55665321000 00 01111 124443 577
Q ss_pred HHHHHHHHcCCeEEEEEe-cccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCc
Q psy1664 254 TIMREIFRHGPVEGSMTI-YADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGL 332 (524)
Q Consensus 254 ~ik~~l~~~GPV~v~i~v-~~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy 332 (524)
.|+++|++ |||+|+|++ +++|++|++|||..+ |...++|||+|||||++. ++++|||||||||++|||+||
T Consensus 123 ~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~~-c~~~~~HaV~iVGyg~~~------~g~~yWivkNSWG~~WGe~Gy 194 (229)
T 1s4v_A 123 ALLKAVAN-QPVSVAIDAGGSDFQFYSEGVFTGS-CGTELDHGVAIVGYGTTI------DGTKYWTVKNSWGPEWGEKGY 194 (229)
T ss_dssp HHHHHHHH-SCEEEEECCCSHHHHTCCSSEECCC-CCCCCCEEEEEEEEEECT------TSCEEEEEECSBCTTSTBTTE
T ss_pred HHHHHHhc-CCEEEEEEeCcHHHhhCCCcEECCC-CCCCCCeEEEEEEecccc------CCCCEEEEEeCCCCCccCCcE
Confidence 78888775 999999999 579999999999875 555679999999999873 368999999999999999999
Q ss_pred cccccccC--ccCCcCcCCcCCC
Q psy1664 333 FRIGCRPY--EIPCERYMNGSRS 353 (524)
Q Consensus 333 ~ri~~~~~--~~~c~~~~~~~~~ 353 (524)
|||+++.. ...|++...+++|
T Consensus 195 ~~i~r~~~~~~~~Cgi~~~~~~p 217 (229)
T 1s4v_A 195 IRMERGISDKEGLCGIAMEASYP 217 (229)
T ss_dssp EEEECSCSSTTCGGGTTSSCEEE
T ss_pred EEEEcCCCCCCCcCcccccceee
Confidence 99999853 2469987766655
No 33
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=1.6e-52 Score=400.88 Aligned_cols=205 Identities=30% Similarity=0.513 Sum_probs=169.2
Q ss_pred CCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHHHH
Q psy1664 97 LPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKAWK 176 (524)
Q Consensus 97 lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a~~ 176 (524)
||++||||++ ++|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+. .+.||+||++..||+
T Consensus 1 lP~~~DwR~~----~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g--~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~ 73 (212)
T 2cio_A 1 IPEYVDWRQK----GAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTG--NLNQYSEQELLDCDR-RSYGCNGGYPWSALQ 73 (212)
T ss_dssp CCSCEETTTT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHS--CCCCBCHHHHHHHCT-TSCTTBCCCHHHHHH
T ss_pred CCCcccCCCC----CCCCCCccCCccchHHHHHHHHHHHHHHHHhcC--CccccCHHHHHHhCC-CCCCCCCCCHHHHHH
Confidence 7999999998 899999999999999999999999999999875 469999999999975 467999999999999
Q ss_pred HHHHhCCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecCC-CHHHH
Q psy1664 177 YWVTTGIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPA-NEETI 255 (524)
Q Consensus 177 ~~~~~Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i 255 (524)
|++++|+++|++| ||... .+.|+...... ..+ .... ...++. ++++|
T Consensus 74 yi~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~~~--------~~~-----~i~~----~~~v~~~~~~~i 121 (212)
T 2cio_A 74 LVAQYGIHYRNTY-------PYEGV--------QRYCRSREKGP--------YAA-----KTDG----VRQVQPYNEGAL 121 (212)
T ss_dssp HHHHTCBCBTTTS-------CCCSS--------CCCCCTTTTCS--------CSB-----CCSE----EEECCSSCHHHH
T ss_pred HHHHhCcCccccc-------CCcCC--------CCCcCCCCCCC--------ceE-----EEee----EEEeCCccHHHH
Confidence 9999999998888 99875 56776532110 000 1111 124443 67888
Q ss_pred HHHHHHcCCeEEEEEecc-cccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCccc
Q psy1664 256 MREIFRHGPVEGSMTIYA-DMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLFR 334 (524)
Q Consensus 256 k~~l~~~GPV~v~i~v~~-~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy~r 334 (524)
|++|++ |||+|+|+++. +|++|++|||..+ |...++|||+|||||+ +|||||||||++|||+||||
T Consensus 122 ~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~~-~~~~~~HaV~iVGyg~-----------~yWivkNSWG~~WGe~Gy~~ 188 (212)
T 2cio_A 122 LYSIAN-QPVSVVLEAAGKDFQLYRGGIFVGP-CGNKVDHAVAAVGYGP-----------NYILIKNSWGTGWGENGYIR 188 (212)
T ss_dssp HHHHHH-SCEEEEECCCSHHHHTCCSSEECCC-CCSCCCEEEEEEEEET-----------TEEEEECSBCTTSTBTTEEE
T ss_pred HHHHHh-CCEEEEEeccCcchhhcCCceecCC-CCCCCCEEEEEEEecC-----------CeEEEEeCCCCCcccCcEEE
Confidence 888875 99999999985 8999999999875 4456899999999995 69999999999999999999
Q ss_pred cccccC--ccCCcCcCCcCCC
Q psy1664 335 IGCRPY--EIPCERYMNGSRS 353 (524)
Q Consensus 335 i~~~~~--~~~c~~~~~~~~~ 353 (524)
|+++.. ...|++...+++|
T Consensus 189 i~~~~~~~~~~Cgi~~~~~~p 209 (212)
T 2cio_A 189 IKRGTGNSYGVCGLYTSSFYP 209 (212)
T ss_dssp EECSSSCTTCGGGTTSCCEEE
T ss_pred EEcCCCCCCCccCcccceeEE
Confidence 999852 2368887665544
No 34
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=6.7e-53 Score=411.28 Aligned_cols=215 Identities=25% Similarity=0.524 Sum_probs=173.3
Q ss_pred CCCCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHH
Q psy1664 95 EELPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKA 174 (524)
Q Consensus 95 ~~lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a 174 (524)
.+||++||||++ ++|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+.. +.||+||++..|
T Consensus 16 ~~lP~~~DwR~~----~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~--~~~~lSeq~l~dC~~~-~~gC~GG~~~~a 88 (241)
T 2oul_A 16 NFDHAAYDWRLH----SGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKN--KLITLSEQELVDCSFK-NYGCNGGLINNA 88 (241)
T ss_dssp CCCSSCEEGGGT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHC--CCCCBCHHHHHHHCTT-SCTTBCBCHHHH
T ss_pred ccCCCccccCcC----CCCCCCccCccchHHHHHHHHHHHHHHHHHhcC--CCcccCHHHHHhhcCC-CCCCCCCCHHHH
Confidence 479999999998 889999999999999999999999999999986 4689999999999753 679999999999
Q ss_pred HHHHHH-hCCccCCccCCCCCccccccCcccccCCCCCC-CCCCCCCCccccccccCCCccccccccccceeeeecCC-C
Q psy1664 175 WKYWVT-TGIVSGGTYASKQGCRPYEIPCERYMNGSHSS-CQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPA-N 251 (524)
Q Consensus 175 ~~~~~~-~Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~-C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 251 (524)
++|+++ .|+++|++| ||... .+. |+..... ..+ .... ...++. +
T Consensus 89 ~~yi~~~~Gi~~e~~y-------PY~~~--------~~~~C~~~~~~---------~~~-----~i~~----~~~v~~~~ 135 (241)
T 2oul_A 89 FEDMIELGGICPDGDY-------PYVSD--------APNLCNIDRCT---------EKY-----GIKN----YLSVPDNK 135 (241)
T ss_dssp HHHHHHTTSBCBTTSS-------CCCTT--------SCCCCCTTSSS---------CCB-----CCSE----EEECCTTC
T ss_pred HHHHHHhCCcCccccC-------CCcCC--------CCCcCCCCCCc---------cce-----eeee----EEEeCCCC
Confidence 999998 699999888 99875 455 7643211 111 1111 124544 6
Q ss_pred HHHHHHHHHHcCCeEEEEEecccccccCCceEEcCCCCCCCCcEEEEEEeccCCC---CCCCccceeEEEEeCCCCCccc
Q psy1664 252 EETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPL---GEGTSSVVKYWLVANSFNTNWG 328 (524)
Q Consensus 252 ~~~ik~~l~~~GPV~v~i~v~~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~---~~g~~~g~~YWivkNSWG~~WG 328 (524)
+++||++| |||+|+|+++++|++|++|||.. .|...++|||+|||||++.. ...+..+++|||||||||++||
T Consensus 136 ~~~ik~~l---GPV~v~i~~~~~f~~Y~~Giy~~-~c~~~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WG 211 (241)
T 2oul_A 136 LKEALRFL---GPISISVAVSDDFAFYKEGIFDG-ECGDQLNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWG 211 (241)
T ss_dssp HHHHHHHT---CCEEEEECBCHHHHTCCSSBCCS-CBCSSCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTST
T ss_pred HHHHHHhh---CCEEEEEecCcchhhcCCcEEcC-cCCCCCCEEEEEEEeccccccccccccCCCCCEEEEEeCCCCCcc
Confidence 88999999 99999999998999999999987 44445899999999998620 0011237899999999999999
Q ss_pred ccCccccccccCc--cCCcCcCCcCCC
Q psy1664 329 ENGLFRIGCRPYE--IPCERYMNGSRS 353 (524)
Q Consensus 329 e~Gy~ri~~~~~~--~~c~~~~~~~~~ 353 (524)
|+|||||+++... ..|++.+.+++|
T Consensus 212 e~Gy~~i~~~~~~~~g~Cgi~~~~~~~ 238 (241)
T 2oul_A 212 ERGFINIETDESGLMRKCGLGTDAFIP 238 (241)
T ss_dssp BTTEEEEEECSSSCCCGGGTTSSEEEE
T ss_pred cCCEEEEEcCCCCCCCcCCccceEEEE
Confidence 9999999998653 248887665443
No 35
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=7.7e-53 Score=411.34 Aligned_cols=215 Identities=24% Similarity=0.514 Sum_probs=173.0
Q ss_pred CCCCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHH
Q psy1664 95 EELPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKA 174 (524)
Q Consensus 95 ~~lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a 174 (524)
.+||++||||++ ++|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+.. +.||+||++..|
T Consensus 18 ~~lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~--~~~~lSeq~lvdC~~~-~~gC~GG~~~~a 90 (243)
T 3bwk_A 18 KLDRIAYDWRLH----GGVTPVKDQALCGSCWAFSSVGSVESQYAIRKK--ALFLFSEQELVDCSVK-NNGCYGGYITNA 90 (243)
T ss_dssp CCCCSCEEGGGT----TCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHC--SCCCBCHHHHHHHCTT-SCGGGCCCHHHH
T ss_pred ccCCCceecCcC----CCCCCCccCCCCchHHHHHHHHHHHHHHHHhcC--CCcccCHHHHHHhcCC-CCCCCCCCHHHH
Confidence 479999999998 889999999999999999999999999999986 4689999999999753 679999999999
Q ss_pred HHHHHH-hCCccCCccCCCCCccccccCcccccCCCCCC-CCCCCCCCccccccccCCCccccccccccceeeeecCC-C
Q psy1664 175 WKYWVT-TGIVSGGTYASKQGCRPYEIPCERYMNGSHSS-CQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPA-N 251 (524)
Q Consensus 175 ~~~~~~-~Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~-C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 251 (524)
++|+++ .|+++|++| ||... .+. |+.... ...+. ... ...++. +
T Consensus 91 ~~y~~~~~Gi~~e~~y-------PY~~~--------~~~~C~~~~~---------~~~~~-----i~~----~~~v~~~~ 137 (243)
T 3bwk_A 91 FDDMIDLGGLCSQDDY-------PYVSN--------LPETCNLKRC---------NERYT-----IKS----YVSIPDDK 137 (243)
T ss_dssp HHHHHHTTSBCBTTTS-------CCCTT--------SCCCCCGGGC---------SSCBC-----CCE----EEECCTTC
T ss_pred HHHHHHhCCccccccc-------CCcCC--------CCCcCCCCCC---------cccee-----eee----EEEeCCCC
Confidence 999998 699999888 99875 444 653211 11111 111 124554 6
Q ss_pred HHHHHHHHHHcCCeEEEEEecccccccCCceEEcCCCCCCCCcEEEEEEeccCCC---CCCCccceeEEEEeCCCCCccc
Q psy1664 252 EETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPL---GEGTSSVVKYWLVANSFNTNWG 328 (524)
Q Consensus 252 ~~~ik~~l~~~GPV~v~i~v~~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~---~~g~~~g~~YWivkNSWG~~WG 328 (524)
+++||++| |||+|+|+++++|+.|++|||.. .|...++|||+|||||++.. ...+..+++|||||||||++||
T Consensus 138 ~~~ik~~l---GPV~v~i~~~~~f~~Y~~Giy~~-~c~~~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WG 213 (243)
T 3bwk_A 138 FKEALRYL---GPISISIAASDDFAFYRGGFYDG-ECGAAPNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWG 213 (243)
T ss_dssp HHHHHHHT---CCEEEEECCCHHHHTCCSSSCCC-CCCSSCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTST
T ss_pred HHHHHHhh---CCEEEEEecChhHHhcCCceecC-CCCCcCCeEEEEEEecCccccccccccCCCCCEEEEEeCCCCCcC
Confidence 88999999 99999999998999999999988 45445899999999998620 0011237899999999999999
Q ss_pred ccCccccccccCc--cCCcCcCCcCCC
Q psy1664 329 ENGLFRIGCRPYE--IPCERYMNGSRS 353 (524)
Q Consensus 329 e~Gy~ri~~~~~~--~~c~~~~~~~~~ 353 (524)
|+|||||+++... ..|++.+.+.+|
T Consensus 214 e~Gy~~i~~~~~~~~g~Cgi~~~~~~~ 240 (243)
T 3bwk_A 214 EGGYINLETDENGYKKTCSIGTEAYVP 240 (243)
T ss_dssp BTTEEEEEECSSSCCCSTTTTSSEEEE
T ss_pred CCcEEEEEcCCCCCCCcCCccceEEEE
Confidence 9999999998653 348887655443
No 36
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=3.3e-52 Score=397.45 Aligned_cols=202 Identities=28% Similarity=0.512 Sum_probs=168.0
Q ss_pred CCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHHHH
Q psy1664 97 LPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKAWK 176 (524)
Q Consensus 97 lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a~~ 176 (524)
||++||||++ ++|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+. .+.||+||++..|++
T Consensus 1 lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g--~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~ 73 (208)
T 1o0e_A 1 LPEQIDWRKK----GAVTPVKNQGSCGSCWAFSTVSTVESINQIRTG--NLISLSEQELVDCDK-KNHGCLGGAFVFAYQ 73 (208)
T ss_dssp CCSCEEGGGG----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHS--CCCCBCHHHHHHHCT-TSCTTBCCCHHHHHH
T ss_pred CCCcCcCCCC----CCCCCCccCCCCccHHHHHHHHHHHHHHHHhcC--CceecCHHHhhhhcC-CCCCCCCCCHHHHHH
Confidence 7999999998 899999999999999999999999999999875 479999999999974 467999999999999
Q ss_pred HHHHh-CCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecC-CCHHH
Q psy1664 177 YWVTT-GIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLP-ANEET 254 (524)
Q Consensus 177 ~~~~~-Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 254 (524)
|++++ |+++|++| ||... .+.|+.. . +.+ ....| ..++ .++++
T Consensus 74 y~~~~~Gi~~e~~y-------PY~~~--------~~~C~~~--~---------~~~-----~i~~~----~~v~~~~~~~ 118 (208)
T 1o0e_A 74 YIINNGGIDTQANY-------PYKAV--------QGPCQAA--S---------KVV-----SIDGY----NGVPFCNEXA 118 (208)
T ss_dssp HHHHHTCBCBTTTS-------CCCSS--------CCCCCCC--C---------CCB-----CCCEE----EECCTTCHHH
T ss_pred HHHHhCCcCccccc-------CccCC--------CCcCCCC--C---------ceE-----EeCeE----EEeCCCCHHH
Confidence 99998 99999888 99875 5667541 0 000 11111 2344 36788
Q ss_pred HHHHHHHcCCeEEEEEecc-cccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCcc
Q psy1664 255 IMREIFRHGPVEGSMTIYA-DMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLF 333 (524)
Q Consensus 255 ik~~l~~~GPV~v~i~v~~-~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy~ 333 (524)
||++|++ |||+|+|+++. +|++|++|||+.+ |...++|||+|||||+ +|||||||||++|||+|||
T Consensus 119 i~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~~-c~~~~~HaV~iVGyg~-----------~yWivkNSWG~~WGe~Gy~ 185 (208)
T 1o0e_A 119 LKQAVAV-QPSTVAIDASSAQFQQYSSGIFSGP-CGTKLNHGVTIVGYQA-----------NYWIVRNSWGRYWGEKGYI 185 (208)
T ss_dssp HHHHHHH-SCEEEEECCCSHHHHTCCSSEECCC-CCSCCCEEEEEEEECS-----------SEEEEECSBCTTSTBTTEE
T ss_pred HHHHHHh-CCEEEEEEccCcccccccCceECCC-CCCcCCEEEEEEEeCC-----------CeEEEEcCCCCcccCCcEE
Confidence 8888876 99999999985 8999999999875 4556899999999995 6999999999999999999
Q ss_pred ccccccCccCCcCcCCcCCC
Q psy1664 334 RIGCRPYEIPCERYMNGSRS 353 (524)
Q Consensus 334 ri~~~~~~~~c~~~~~~~~~ 353 (524)
||+++.....|++...+++|
T Consensus 186 ~i~~~~~~~~Cgi~~~~~~p 205 (208)
T 1o0e_A 186 RMLRVGGCGLCGIARLPYYP 205 (208)
T ss_dssp EEECCSTTCGGGTTSSCEEE
T ss_pred EEEcCCCCCcCCCcccceee
Confidence 99997522368887666544
No 37
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=2.9e-52 Score=399.59 Aligned_cols=205 Identities=28% Similarity=0.575 Sum_probs=170.4
Q ss_pred CCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHHHH
Q psy1664 97 LPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKAWK 176 (524)
Q Consensus 97 lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a~~ 176 (524)
||++||||++ ++|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+. .+.||+||++..||+
T Consensus 1 lP~~~DwR~~----~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~--~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~ 73 (214)
T 2bdz_A 1 YPESIDWREK----GAVTPVKNQNPCGSCWAFSTVATIEGINKIITG--QLISLSEQELLDCER-RSHGCDGGYQTTSLQ 73 (214)
T ss_dssp CCSCEETTTT----TCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHS--CBCCBCHHHHHHHCT-TSCTTBCCCHHHHHH
T ss_pred CCCcEeCCCC----CCCCCCccCCCCccHHHHHhHHHHHHHHHHhcC--CccccCHHHHHhhcC-CCCCCCCCCHHHHHH
Confidence 7999999998 899999999999999999999999999999986 468999999999975 467999999999999
Q ss_pred HHHHhCCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecC-CCHHHH
Q psy1664 177 YWVTTGIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLP-ANEETI 255 (524)
Q Consensus 177 ~~~~~Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i 255 (524)
|++++|+++|++| ||... .+.|+........ .....| ..++ .++++|
T Consensus 74 y~~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~~~~~-------------~~i~~y----~~v~~~~~~~i 121 (214)
T 2bdz_A 74 YVVDNGVHTEREY-------PYEKK--------QGRCRAKDKKGPK-------------VYITGY----KYVPANDEISL 121 (214)
T ss_dssp HHHHHCEEBTTTS-------CCCSS--------CCCCCTTTCCSCE-------------ECCCEE----EEECSSBHHHH
T ss_pred HHHHhCCCccccC-------CCCCC--------CCCCCCCCCCCce-------------eeecCE----EEeCCCcHHHH
Confidence 9999999999888 99876 5667654221100 011111 2344 468899
Q ss_pred HHHHHHcCCeEEEEEec-ccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCccc
Q psy1664 256 MREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLFR 334 (524)
Q Consensus 256 k~~l~~~GPV~v~i~v~-~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy~r 334 (524)
|++|++ |||+|+|+++ ++|++|++|||..+ |...++|||+|||||+ +|||||||||++|||+||||
T Consensus 122 ~~~l~~-gPV~v~i~~~~~~f~~Y~~Giy~~~-~~~~~~HaV~iVGyg~-----------~yWivkNSWG~~WGe~Gy~~ 188 (214)
T 2bdz_A 122 IQAIAN-QPVSVVTDSRGRGFQFYKGGIYEGP-CGTNTDHAVTAVGYGK-----------TYLLLKNSWGPNWGEKGYIR 188 (214)
T ss_dssp HHHHHH-SCEEEEECCCSHHHHTCCSSEECCS-CCSCCCEEEEEEEECS-----------SEEEEECSBCTTSTBTTEEE
T ss_pred HHHHHh-CCEEEEEeeChhHhhcccCceecCC-CCCCCCeEEEEEEcCC-----------CeEEEEeCCCCCcccCCEEE
Confidence 999986 9999999998 79999999999875 4556899999999995 69999999999999999999
Q ss_pred cccccC--ccCCcCcCCcCCC
Q psy1664 335 IGCRPY--EIPCERYMNGSRS 353 (524)
Q Consensus 335 i~~~~~--~~~c~~~~~~~~~ 353 (524)
|+++.. ...|++...+++|
T Consensus 189 i~~~~~~~~~~Cgi~~~~~~p 209 (214)
T 2bdz_A 189 IKRASGRSKGTCGVYTSSFFP 209 (214)
T ss_dssp EECCCSBSSCGGGTTSCEEEE
T ss_pred EEcCCCCCCCcccccccceEE
Confidence 999753 2468887665554
No 38
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=1.5e-52 Score=405.05 Aligned_cols=213 Identities=26% Similarity=0.564 Sum_probs=175.5
Q ss_pred CCCCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCCC-CCCCCCCChHH
Q psy1664 95 EELPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKDC-GNGCQGGFHGK 173 (524)
Q Consensus 95 ~~lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~~-~~gC~GG~~~~ 173 (524)
.+||++||||++ ++|+||||||.||||||||++++||++++++++ ..+.||+|+|++|+... +.||+||++..
T Consensus 5 ~~lP~~~Dwr~~----~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~--~~~~lS~q~l~~c~~~~~~~gC~GG~~~~ 78 (224)
T 3f75_A 5 SELPAGVDWRSR----GCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTG--KLVSLSEQELMDCSRAEGNQSCSGGEMND 78 (224)
T ss_dssp GGSCSCEEHHHH----TCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHS--CCCCBCHHHHHHHCGGGTCCGGGCBCHHH
T ss_pred cCCCCceecccC----CCCCCCccCCCCccHHHHHHHHHHHHHHHHhcC--CCceeCHHHHhhcccCCCCCCCCCCCHHH
Confidence 479999999998 889999999999999999999999999999986 46999999999997643 57999999999
Q ss_pred HHHHHHH-hCCccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecC-CC
Q psy1664 174 AWKYWVT-TGIVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLP-AN 251 (524)
Q Consensus 174 a~~~~~~-~Gi~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 251 (524)
|++|+++ .|+++|++| ||... .+.|+....... . ....| ..++ .+
T Consensus 79 a~~~~~~~~Gi~~e~~y-------PY~~~--------~~~C~~~~~~~~---------~-----~i~~~----~~~~~~~ 125 (224)
T 3f75_A 79 AFQYVLDSGGICSEDAY-------PYLAR--------DEECRAQSCEKV---------V-----KILGF----KDVPRRS 125 (224)
T ss_dssp HHHHHHHHTCBCBTTTS-------CCCSS--------CCCCCGGGSCCC---------B-----CCSEE----EECCSSC
T ss_pred HHHHHHHhCCccccccC-------CCcCC--------CCCCCcCCCCce---------E-----EeccE----EEeCCCh
Confidence 9999998 699999888 99876 556754321110 0 01111 2343 46
Q ss_pred HHHHHHHHHHcCCeEEEEEecc-cccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCccccc
Q psy1664 252 EETIMREIFRHGPVEGSMTIYA-DMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGEN 330 (524)
Q Consensus 252 ~~~ik~~l~~~GPV~v~i~v~~-~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~ 330 (524)
+++||++|. +|||+|+|+++. +|++|++|||+ +.|...++|||+|||||++. .++++|||||||||++|||+
T Consensus 126 ~~~l~~~l~-~gPV~v~i~~~~~~f~~y~~Giy~-~~~~~~~~Hav~iVGyg~~~-----~~g~~ywivkNSWG~~WG~~ 198 (224)
T 3f75_A 126 EAAMKAALA-KSPVSIAIEADQMPFQFYHEGVFD-ASCGTDLDHGVLLVGYGTDK-----ESKKDFWIMKNSWGTGWGRD 198 (224)
T ss_dssp HHHHHHHHH-HSCEEEEECCCSHHHHTEEEEEEC-CCCCCCCCEEEEEEEEEEET-----TTTEEEEEEECSBCTTSTBT
T ss_pred HHHHHHHHc-CCCEEEEEeccchhhhcCccceEC-CCCCCccCeEEEEEEEeccc-----CCCCCEEEEECCcCcchhhC
Confidence 888999988 999999999985 89999999998 56677889999999999863 14689999999999999999
Q ss_pred CccccccccC-ccCCcCcCCcCCC
Q psy1664 331 GLFRIGCRPY-EIPCERYMNGSRS 353 (524)
Q Consensus 331 Gy~ri~~~~~-~~~c~~~~~~~~~ 353 (524)
|||||+++.. ...|++.+.+++|
T Consensus 199 Gy~~i~~~~~~~~~cgi~~~~~~p 222 (224)
T 3f75_A 199 GYMYMAMHKGEEGQCGLLLDASFP 222 (224)
T ss_dssp TEEEEESCSCTTCGGGTTSSCEEE
T ss_pred CEEEEEcCCCCCCcCcccCceeee
Confidence 9999999761 1369987766554
No 39
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=3.9e-48 Score=387.96 Aligned_cols=250 Identities=14% Similarity=0.120 Sum_probs=175.6
Q ss_pred cccccccccccchHHHHHHHhCCCCCCCCCCCCCCcccccCCCCCCCCCccccccCCCCCCCCccCCCCCCCccHHHHHH
Q psy1664 51 FYGAEKNALSKLTLSELEMRMGVHPDSKLPQNRLPLLVQLSDPLEELPEGFDARINWPYCPTIQEIRDQGSCGSGWALGA 130 (524)
Q Consensus 51 ~~~~g~N~fsd~t~eE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~ 130 (524)
...-..|++.++..|.|+..+|..++....+ ............+||++||||++ + ||||||.||||||||+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~lG~~p~~~d~r--d~~~~~~~~~~~~lP~s~DwR~~----~---pVkdQG~CGSCWAFAa 83 (291)
T 3ois_A 13 GLVPRGSHMQTVLKRRKKSGYGYIPDIADIR--DFSYTPEKSVIAALPPKVDLTPP----F---QVYDQGRIGSCTANAL 83 (291)
T ss_dssp ----------CCCCCCCCTTCCEECCCCCTT--CCBCCCCHHHHHTCCSEEECCCS----S---CCCBCTTSSCHHHHHH
T ss_pred CcccchhhHhHhhhccccccCCCCCCCCccc--ccccCCCccccccCCcceecccC----C---CcccCCCCccHHHHHH
Confidence 3445567888888888988888765542111 11100000012479999999998 3 9999999999999999
Q ss_pred HHHHHHHHHHHcCCCccccCCHHHHH--hhcCC--C-CCCCCCCChHHHHHHHHHhCCccCCccCCCCCccccccCcccc
Q psy1664 131 VEAMSDRVCIASRGKRHVRLSSDDLV--SCCKD--C-GNGCQGGFHGKAWKYWVTTGIVSGGTYASKQGCRPYEIPCERY 205 (524)
Q Consensus 131 ~~~le~~~~i~~~~~~~~~LS~q~lv--dC~~~--~-~~gC~GG~~~~a~~~~~~~Gi~~e~~y~~~e~c~PY~~~~~~~ 205 (524)
+++||+++++. + ..+.||+|+|+ +|... . ..+|.||++..||+|++++||++|++| ||....
T Consensus 84 ~~alE~~~~~~-g--~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~Gi~~e~~y-------PY~~~~--- 150 (291)
T 3ois_A 84 AAAIQFERIHD-K--QSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKLGVCPEKEW-------PYGDTP--- 150 (291)
T ss_dssp HHHHHHHHHHT-T--CSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHTCCCBGGGS-------CCCCCC---
T ss_pred HHHHHHHHHHh-C--CCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHhCCCCHhhC-------CCCCCc---
Confidence 99999998753 3 35789999998 67632 2 236889999999999999999999999 998651
Q ss_pred cCCCCCCCCCCCCCCc--cccccccCCCccccccccccc-eeeeecCCCHHHHHHHHHHcCCeEEEEEecccccccCC--
Q psy1664 206 MNGSHSSCQDNEPNTP--ECIRKCQPGYDVSYEDDLNFG-RIAYSLPANEETIMREIFRHGPVEGSMTIYADMILYKT-- 280 (524)
Q Consensus 206 ~~~~~~~C~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ik~~l~~~GPV~v~i~v~~~f~~Y~s-- 280 (524)
...+.|........ .+...|... ...+. ...+.++.++++||++|+++|||+|+|.++++|+.|++
T Consensus 151 --~~~~~C~~~~~~~~~~~p~~~C~~~-------~~~~~i~~y~~v~~~e~~i~~al~~~gPV~v~~~~~~~f~~y~~~~ 221 (291)
T 3ois_A 151 --ADPRTEEFPPGAPASKKPSDQCYKD-------AQNYKITEYSRVAQDIDHLKACLAVGSPFVFGFSVYNSWVGNNSLP 221 (291)
T ss_dssp --CCTTTCSCCTTCGGGSCCCHHHHHH-------HGGGCCCEEEECCSCHHHHHHHHHTTCCEEEEEEEEHHHHGGGCCC
T ss_pred --cccccccccccccccCCCCHHHHhh-------cccceeccEEEcCcCHHHHHHHHHcCCCEEEEEEeccchhhcCCCC
Confidence 11245654211000 001112110 01111 12345667899999999999999999999999999998
Q ss_pred ceEEcCCCCC--CCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCccccccccC
Q psy1664 281 GIYKHVAGGP--LGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLFRIGCRPY 340 (524)
Q Consensus 281 GIy~~~~~~~--~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy~ri~~~~~ 340 (524)
|||..+.|.. .++|||+|||||+ +++|||||||||++|||+|||||+++-.
T Consensus 222 Gi~~~~~~~~~~~~~Hav~iVGy~~---------~~~ywivkNSWG~~WG~~Gy~~i~~~~~ 274 (291)
T 3ois_A 222 VRIPLPTKNDTLEGGHAVLCVGYDD---------EIRHFRIRNSWGNNVGEDGYFWMPYEYI 274 (291)
T ss_dssp SBCCCCCTTSCEEEEEEEEEEEEET---------TTTEEEEECSBCTTSTBTTEEEEEHHHH
T ss_pred eEEeCCCCCCCCcCCeEEEEEEEeC---------CCCEEEEEeCCCCCCCCCcEEEEEHHHh
Confidence 9999887643 3699999999984 3689999999999999999999998643
No 40
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=8.5e-47 Score=373.93 Aligned_cols=229 Identities=19% Similarity=0.367 Sum_probs=154.1
Q ss_pred CccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCC-CCCCCCCCC-hHHHHH
Q psy1664 99 EGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKD-CGNGCQGGF-HGKAWK 176 (524)
Q Consensus 99 ~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~-~~~gC~GG~-~~~a~~ 176 (524)
.-.|||++ ++|-.++||||||.||||||||++++||++++|+++ .++.||+|+|+||+.. .+.||+||. +..+++
T Consensus 9 ~~~dWR~~-~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~--~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~ 85 (265)
T 2wbf_X 9 YCNRLKDE-NNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGY--EPTKISALYVANCYKGEHKDRCDEGSSPMEFLQ 85 (265)
T ss_dssp CBCGGGCT-TSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTC--CCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHH
T ss_pred HHHhhccC-CCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcC--CCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHH
Confidence 45799986 444334599999999999999999999999999764 4699999999999864 357999996 555678
Q ss_pred HHHHhC-CccCCccCCCCCccccccCcccccCCCCCCCCCCCCCCccc---cccccCCCccccccccccceeee-ecCCC
Q psy1664 177 YWVTTG-IVSGGTYASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPEC---IRKCQPGYDVSYEDDLNFGRIAY-SLPAN 251 (524)
Q Consensus 177 ~~~~~G-i~~e~~y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 251 (524)
|++++| +++|+.| ||... ...+.|+........+ ...+.............|..... ....+
T Consensus 86 ~i~~~Ggi~~e~~y-------PY~~~------~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 152 (265)
T 2wbf_X 86 IIEDYGFLPAESNY-------PYNYV------KVGEQCPKVEDHWMNLWDNGKILHNKNEPNSLDGKGYTAYESERFHDN 152 (265)
T ss_dssp HHHHHCCCCBTTTS-------CCCGG------GTTSCCCCCCTTCCCTTTTCEECCCCCSSSTTCCSSEEEEEGGGGTTC
T ss_pred HHHHcCCCCCcccc-------CCcCC------CCCCCCCCccccccccccccccccccCCCceeecCCceEeeccccccc
Confidence 888887 8887777 99763 1135676433210000 00000000000011122211100 00013
Q ss_pred ----HHHHHHHHHHcCCeEEEEEecccccccC-CceEEcCCCC-CCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCC
Q psy1664 252 ----EETIMREIFRHGPVEGSMTIYADMILYK-TGIYKHVAGG-PLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNT 325 (524)
Q Consensus 252 ----~~~ik~~l~~~GPV~v~i~v~~~f~~Y~-sGIy~~~~~~-~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~ 325 (524)
+++||++|+++|||+|+|.+. +|+.|+ +|++....|. ..++|||+|||||++...+| .+++|||||||||+
T Consensus 153 ~~~~~~~ik~~i~~~GPV~v~i~~~-~f~~y~~~g~~~~~~c~~~~~~HaV~iVGyG~~~~~~g--~~~~YWivkNSWG~ 229 (265)
T 2wbf_X 153 MDAFVKIIKTEVMNKGSVIAYIKAE-NVMGYEFSGKKVKNLCGDDTADHAVNIVGYGNYVNSEG--EKKSYWIVRNSWGP 229 (265)
T ss_dssp HHHHHHHHHHHHHHHSCEEEEECGG-GGCSGGGGSSSEECCCCCSCCCEEEEEEEEEEEECTTS--CEEEEEEEECSBCT
T ss_pred hhhHHHHHHHHHHhcCCEEEEEEcc-cccccccCCcEEcCCCCCCcCCEEEEEEEEeCCcccCC--CcCCEEEEEcCCCC
Confidence 478999999999999999985 687775 5544333344 46899999999998511011 23699999999999
Q ss_pred cccccCccccccccCccCCcCc
Q psy1664 326 NWGENGLFRIGCRPYEIPCERY 347 (524)
Q Consensus 326 ~WGe~Gy~ri~~~~~~~~c~~~ 347 (524)
+|||+|||||+++.. ..|++.
T Consensus 230 ~WGe~GY~ri~~~g~-n~Cgi~ 250 (265)
T 2wbf_X 230 YWGDEGYFKVDMYGP-THCHFN 250 (265)
T ss_dssp TSTBTTEEEEESSCC-TTCSSC
T ss_pred ccCCCCEEEEEecCC-CccCcc
Confidence 999999999987532 258754
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=100.00 E-value=1.4e-36 Score=315.31 Aligned_cols=223 Identities=17% Similarity=0.225 Sum_probs=153.4
Q ss_pred CCCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCH----------------HHHHhhc
Q psy1664 96 ELPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSS----------------DDLVSCC 159 (524)
Q Consensus 96 ~lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~----------------q~lvdC~ 159 (524)
..|..|+++.. ..++||+||++||+|||||++++||+.++++.++ ..+.||+ |+|+||+
T Consensus 47 ~~~~~F~~~~~----~~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~-~~~~lSe~yl~fwDKlEkan~flq~lidc~ 121 (453)
T 2cb5_A 47 RAQHVFQHAVP----QEGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNI-EEFEFSQSYLFFWDKVERCYFFLSAFVDTA 121 (453)
T ss_dssp HCCCCCSEECS----CCCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTC-SCCCBCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCceeeeec----cCCCCcccCCCccchHhhhhHHHHHHHHHHHhcC-CeEeeChHHHHHHHHHHHhhHHHHHHHHHH
Confidence 45778888877 5689999999999999999999999999998544 4699999 9999997
Q ss_pred CC-------------CCCCCCCCChHHHHHHHHHhCCccCCccCCCCCccccccCcccc--c------------------
Q psy1664 160 KD-------------CGNGCQGGFHGKAWKYWVTTGIVSGGTYASKQGCRPYEIPCERY--M------------------ 206 (524)
Q Consensus 160 ~~-------------~~~gC~GG~~~~a~~~~~~~Gi~~e~~y~~~e~c~PY~~~~~~~--~------------------ 206 (524)
.. .+.||+||....|++++++.|+++++.| ||+....+. +
T Consensus 122 ~~~~~~d~R~v~~l~~~~gcdGG~~~~a~~~i~kyGl~p~~~y-------P~~~~s~ns~~mn~~L~~kLr~~a~~LR~~ 194 (453)
T 2cb5_A 122 QRKEPEDGRLVQFLLMNPANDGGQWDMLVNIVEKYGVIPKKCF-------PESYTTEATRRMNDILNHKMREFCIRLRNL 194 (453)
T ss_dssp HTTCCTTSHHHHHHHHCTTCSCBCHHHHHHHHHHHCCCBGGGS-------CCCTGGGBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCcchhhHHHhcCCCCCCCCChHHHHHHHHHcCccchhhc-------cccccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 54 2569999999999999999999999999 887631000 0
Q ss_pred --CCCCC---C----------------CCCCCCC-------------------Cc-----ccccc--ccCCCccccccc-
Q psy1664 207 --NGSHS---S----------------CQDNEPN-------------------TP-----ECIRK--CQPGYDVSYEDD- 238 (524)
Q Consensus 207 --~~~~~---~----------------C~~~~~~-------------------~~-----~~~~~--~~~~~~~~~~~~- 238 (524)
.+... . |.-.++. +| ..... -...+. .....
T Consensus 195 ~~~g~~~~~l~~~k~~~l~~iy~il~~clG~pP~~F~~~~~dkd~~~~~~~~~TP~~F~~~~~~~~~~~~~yv-~l~n~p 273 (453)
T 2cb5_A 195 VHSGATKGEISATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYEKIGPITPLEFYREHVKPLFNMEDKI-CLVNDP 273 (453)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSSEEEEEECTTSCEEEEEEECHHHHHHHHTTTTSCGGGEE-EEECCC
T ss_pred HhcCCchHHHHHHHHHHHHHHHHHHHHHcCCCCceeeEEEEccCCcccccCCCCHHHHHHHhcCCcCCCCCeE-EEecCC
Confidence 00000 0 2100000 00 00000 000000 00000
Q ss_pred ---cccce----------------eeeecCCCH--HHHHHHHHHcCCeEEEEEecccccccCCceEEcCCC---------
Q psy1664 239 ---LNFGR----------------IAYSLPANE--ETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAG--------- 288 (524)
Q Consensus 239 ---~~~~~----------------~~~~~~~~~--~~ik~~l~~~GPV~v~i~v~~~f~~Y~sGIy~~~~~--------- 288 (524)
..|.+ ..++++.++ +.++.+|.++|||+++++|.. +.++++|||+..+|
T Consensus 274 ~~~~py~~~y~v~~~~Nv~~g~~~~y~Nvp~~~l~~~~~~al~~g~PV~~~~Dv~~-~~~~k~GI~~~~~~~~~~~fg~~ 352 (453)
T 2cb5_A 274 RPQHKHNKLYTVEYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGK-HFNSKLGLSDMNLYDHELVFGVS 352 (453)
T ss_dssp CTTSCSSEEEEETTCCSSTTCCCCCEEECCHHHHHHHHHHHHHTTCCEEEEECTTT-TEETTTTEECTTSBCHHHHHSCC
T ss_pred CCcCcccceeEEeecCcccccccccccccCHHHHHHHHHHHHHcCCCEEEEEEeCh-hhccCCcEEcCccccchhhcCcc
Confidence 00000 023444332 455678889999999999975 44559999987665
Q ss_pred -------------CCCCCcEEEEEEec--cCCCCCCCccce-eEEEEeCCCCCcccccCccccccc
Q psy1664 289 -------------GPLGEHAIRIIGWG--QEPLGEGTSSVV-KYWLVANSFNTNWGENGLFRIGCR 338 (524)
Q Consensus 289 -------------~~~~~HaV~iVGyg--~~~~~~g~~~g~-~YWivkNSWG~~WGe~Gy~ri~~~ 338 (524)
....+|||+||||| .+. +|+ +|||||||||++||++|||+|++.
T Consensus 353 ~~~m~KaeRl~~~~s~~~HAmlivGyg~~~d~------~G~~~yWiVkNSWG~~wG~~GY~~ms~~ 412 (453)
T 2cb5_A 353 LKNMNKAERLTFGESLMTHAMTFTAVSEKDDQ------DGAFTKWRVENSWGEDHGHKGYLCMTDE 412 (453)
T ss_dssp SCSSCHHHHHHTTSCCCCEEEEEEEEEECTTS------CSCEEEEEEECSBCTTSTBTTEEEEEHH
T ss_pred ccccCHHHHhhccCCCCCeEEEEEEecccccc------CCCccEEEEEcCcCCCcCcCceEEechh
Confidence 34579999999999 652 356 999999999999999999999864
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=5.7e-36 Score=311.18 Aligned_cols=224 Identities=16% Similarity=0.166 Sum_probs=143.4
Q ss_pred CCCCccccccCCCCCCCCccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCH----------------HHHHhhc
Q psy1664 96 ELPEGFDARINWPYCPTIQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSS----------------DDLVSCC 159 (524)
Q Consensus 96 ~lP~s~DwR~~~~~~g~vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~----------------q~lvdC~ 159 (524)
..|..|+++.. ..++||||||+||+|||||++++||+.++++.++ ..+.||+ |+|+||+
T Consensus 52 ~~~~~F~~~~~----~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~-~~~~LSe~yl~~~dklEkan~flq~lvdc~ 126 (457)
T 2e01_A 52 QDNRVFNTVVS----TDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNL-KEFELSQAYLFFYDKLEKANYFLDQIVSSA 126 (457)
T ss_dssp HCCCCCSEECC----------------CCHHHHHHHHHHHHHHHHHTTC-SSCCBCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCceEEEec----CCccCcccCCCCccchhHHhHHHHHHHHHHHhCC-CceeeCChhhhhhhHHHHHHHHHHHHHHhc
Confidence 36677888876 5689999999999999999999999999998434 4699999 7889997
Q ss_pred CC-----------CCCCCCCCChHHHHHHHHHhCCccCCccCCCCCcccc-ccCccc--ccC------------------
Q psy1664 160 KD-----------CGNGCQGGFHGKAWKYWVTTGIVSGGTYASKQGCRPY-EIPCER--YMN------------------ 207 (524)
Q Consensus 160 ~~-----------~~~gC~GG~~~~a~~~~~~~Gi~~e~~y~~~e~c~PY-~~~~~~--~~~------------------ 207 (524)
.. .+.||+||....|++++++.|+++++.| || +....+ ..+
T Consensus 127 ~~~~~~r~v~~l~~~~gcdGG~~~~a~~~i~kyGivpe~~y-------P~~s~~s~ns~~~n~~L~~kLr~~a~~lR~~~ 199 (457)
T 2e01_A 127 DQDIDSRLVQYLLAAPTEDGGQYSMFLNLVKKYGLIPKDLY-------GDLPYSTTASRKWNSLLTTKLREFAETLRTAL 199 (457)
T ss_dssp TSCTTSHHHHHHHHCTTCSCBCHHHHHHHHHHHCCCBGGGS-------CSCSHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccchhhhhhccCCCCCCCCHHHHHHHHHHcCccchhhc-------CCcccCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 52 3579999999999999999999999988 88 321000 000
Q ss_pred --C------------------------CCCCCCCC---C---------------CCCccc-c-ccc--c-CCC-------
Q psy1664 208 --G------------------------SHSSCQDN---E---------------PNTPEC-I-RKC--Q-PGY------- 231 (524)
Q Consensus 208 --~------------------------~~~~C~~~---~---------------~~~~~~-~-~~~--~-~~~------- 231 (524)
+ .-+.|+.. . ..+|.- . ..+ . ..|
T Consensus 200 ~~~~~~~~~l~~~~~~~l~~iy~il~~~LG~pP~~~~~~F~~~~~dkd~~~~~~~~TP~~F~~~~v~~~~~dyV~l~n~p 279 (457)
T 2e01_A 200 KERSADDSIIVTLREQMQREIFRLMSLFMDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDP 279 (457)
T ss_dssp HHSCTTSHHHHHHHHHHHHHHHHHHHHHSCCCSSCTTSCEEEEEECTTSCEEEEEECHHHHHHHTTCCCTTSEEEEECCT
T ss_pred hccCchhhhHHHHHHHHHHHHHHHHHHHcCCCCCCCCceEEEEEEcCCCCccCCCcChHHHHHHHcCCCchheEEEeecC
Confidence 0 00112110 0 001100 0 000 0 000
Q ss_pred --------ccccccccccce--eeeecCCCH--HHHHHHHHHcCCeEEEEEecccccccCCceEEcCC------------
Q psy1664 232 --------DVSYEDDLNFGR--IAYSLPANE--ETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVA------------ 287 (524)
Q Consensus 232 --------~~~~~~~~~~~~--~~~~~~~~~--~~ik~~l~~~GPV~v~i~v~~~f~~Y~sGIy~~~~------------ 287 (524)
.+.+.....-+. ..+++|.++ +.++.+|.++|||+++++|.. |++|++|||+..+
T Consensus 280 ~~py~~~y~ve~~~N~~~g~~~~y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~~-~~~~~~GI~~~~~~~~~~fg~~~~m 358 (457)
T 2e01_A 280 RHPYGKLIKIDRLGNVLGGDAVIYLNVDNETLSKLVVKRLQNNKAVFFGSHTPK-FMDKKTGVMDIELWNYPAIGYNLPQ 358 (457)
T ss_dssp TSCTTCEEEETTCCSSTTCCCEEEEECCHHHHHHHHHHHHHTTCCEEEEECTTT-TEETTTTEECTTSBCGGGGTCCCCC
T ss_pred CCccCeeEEEeccCCeecCCceeEEEcCHHHHHHHHHHHHHhCCCEEEEEEcCH-hHcccCceecccccchhhcCccccc
Confidence 000000000000 134555443 456677889999999999975 8888999997654
Q ss_pred --------CCCCCCcEEEEEEeccCCCCCCCccce--eEEEEeCCCCCcccccCccccccc
Q psy1664 288 --------GGPLGEHAIRIIGWGQEPLGEGTSSVV--KYWLVANSFNTNWGENGLFRIGCR 338 (524)
Q Consensus 288 --------~~~~~~HaV~iVGyg~~~~~~g~~~g~--~YWivkNSWG~~WGe~Gy~ri~~~ 338 (524)
+....+|||+|||||.+. +|+ +|||||||||++||++|||+|++.
T Consensus 359 ~KaeRl~~~~s~~~HAmlivGyg~d~------~G~~p~yW~VkNSWG~~wG~~GY~~ms~~ 413 (457)
T 2e01_A 359 QKASRIRYHESLMTAAMLITGCHVDE------TSKLPLRYRVENSWGKDSGKDGLYVMTQK 413 (457)
T ss_dssp CHHHHHHTTSCCCCEEEEEEEEEECT------TTCCEEEEEEECSSCTTSTBTTEEEEEHH
T ss_pred CHHHhhccCCCCCCeEEEEEEEEecc------CCCccCEEEEEeCccCCcCCCceEEeehh
Confidence 245689999999999863 456 899999999999999999999864
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=99.97 E-value=8.2e-32 Score=274.11 Aligned_cols=76 Identities=18% Similarity=0.134 Sum_probs=68.8
Q ss_pred CccCCCCCCCccHHHHHHHHHHHHHHHHHcCCCccccCCHHHHHhhcCC-----------CCCCCCCCChHHHHHHHHHh
Q psy1664 113 IQEIRDQGSCGSGWALGAVEAMSDRVCIASRGKRHVRLSSDDLVSCCKD-----------CGNGCQGGFHGKAWKYWVTT 181 (524)
Q Consensus 113 vtpvkdQg~CGsCwAfA~~~~le~~~~i~~~~~~~~~LS~q~lvdC~~~-----------~~~gC~GG~~~~a~~~~~~~ 181 (524)
++||||||+||+|||||++++||+.++++++ ..+.||+|+|++|+.. ...||+||....|++|++++
T Consensus 22 vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~--~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~ 99 (383)
T 3pw3_A 22 ITSVKNQNRAGTCWCYSSYSFLESELLRMGK--GEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETF 99 (383)
T ss_dssp CCCCCBCCBSSCHHHHHHHHHHHHHHHHTTC--CCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHT
T ss_pred CCCcccCCCCcHHHHHHhHHHHHHHHHHHcC--CCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHc
Confidence 7999999999999999999999999999864 5799999999999641 13699999999999999999
Q ss_pred CCccCCccC
Q psy1664 182 GIVSGGTYA 190 (524)
Q Consensus 182 Gi~~e~~y~ 190 (524)
||++++.||
T Consensus 100 Givpe~~YP 108 (383)
T 3pw3_A 100 GLVPEEEMR 108 (383)
T ss_dssp CCCBGGGSC
T ss_pred CcCcHHhCC
Confidence 999999993
No 44
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=99.95 E-value=1.5e-28 Score=248.15 Aligned_cols=131 Identities=45% Similarity=0.981 Sum_probs=108.9
Q ss_pred CCCCCCCCCCCccccccccCCCccccccccccceeeeecCCCHHHHHHHHHHcCCeEEEEEecccccccCCceEEcCCCC
Q psy1664 210 HSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPANEETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGG 289 (524)
Q Consensus 210 ~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~GPV~v~i~v~~~f~~Y~sGIy~~~~~~ 289 (524)
.+.|... ..++.|...|...+.+.+.....|....+.++.++++||++|+++|||+|+|+++++|++|++|||.++++.
T Consensus 179 ~~~C~~~-~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~~~e~~i~~~i~~~GPV~v~i~~~~~f~~Y~~GVy~~~~~~ 257 (317)
T 3pbh_A 179 RPPCTGE-GDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGE 257 (317)
T ss_dssp CSCCCSC-CCCCCCCCSCCSSCCSCGGGSEECBCCCEEECSCHHHHHHHHHHHCCEEEEEEEEGGGGGEEEEEECCCSCC
T ss_pred CCCCCCc-CCCCcccccccCCCccceeeeeeeeeecccCCcHHHHHHHHHHHCCCEEEEEEecccccCCCCcEEccCCCC
Confidence 4556543 345567777877776666666666666677788999999999999999999999999999999999988766
Q ss_pred CCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCccccccccCccCCcCcCCc
Q psy1664 290 PLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLFRIGCRPYEIPCERYMNG 350 (524)
Q Consensus 290 ~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy~ri~~~~~~~~c~~~~~~ 350 (524)
..++|||+|||||++ ++++|||||||||++|||+|||||+|+.. .|++....
T Consensus 258 ~~~~HaV~iVGyG~~-------~g~~YWivkNSWG~~WGe~GY~ri~rg~n--~CgI~~~~ 309 (317)
T 3pbh_A 258 MMGGHAIRILGWGVE-------NGTPYWLVANSWNTDWGDNGFFKILRGQD--HCGIESEV 309 (317)
T ss_dssp EEEEEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTEEEEECSSC--GGGTTTSC
T ss_pred CCCCEEEEEEEEEEe-------CCeeEEEEEcCCCCCcCCCcEEEEEcCCC--cccCCCce
Confidence 667999999999986 57999999999999999999999999865 68886543
No 45
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=99.95 E-value=3.8e-28 Score=232.50 Aligned_cols=101 Identities=26% Similarity=0.578 Sum_probs=90.4
Q ss_pred eeEEEEcCCCHHHHHHHHHhCCCEEEEEecccccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEc
Q psy1664 384 GRIAYSLPANEETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVAN 463 (524)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~gPv~~~~~~~~~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~N 463 (524)
...++.++.++++||++|+++|||+++|++ ++|++|++|||.. +....++|||+|||||+++ +++||||||
T Consensus 112 i~~~~~v~~~~~~ik~~l~~~gPV~v~~~~-~~f~~Y~~Giy~~-~~~~~~~HaV~iVGyg~~~-------g~~yWivkN 182 (215)
T 3i06_A 112 ITGHVELPQDEAQIAAWLAVNGPVAVAVDA-SSWMTYTGGVMTS-CVSEQLDHGVLLVGYNDSA-------AVPYWIIKN 182 (215)
T ss_dssp EEEEEECCSCHHHHHHHHHHHCCEEEEECC-TTGGGCCSSEECS-CCCSCCCEEEEEEEEESSS-------SSCEEEEEC
T ss_pred ecceEEeCChHHHHHHHHHHCCCEEEEEEc-hHHhcCCCCcccC-CCCCccCcEEEEEEEeccC-------CcEEEEEEC
Confidence 445677888999999999999999999999 6899999999975 3344579999999999887 889999999
Q ss_pred CCCCCCCCCcEEEEEeCCCccCccccceec
Q psy1664 464 SFNTNWGENGLFRIVRGQNECGIEADITAG 493 (524)
Q Consensus 464 SWG~~WG~~Gy~~i~~g~~~cgi~~~~~~~ 493 (524)
|||++||++|||||+||.|.|||++.+.++
T Consensus 183 SWG~~WGe~Gy~~i~rg~n~cgi~~~~~~~ 212 (215)
T 3i06_A 183 SWTTQWGEEGYIRIAKGSNQCLVKEEASSA 212 (215)
T ss_dssp SBCTTSTBTTEEEEESSSCGGGTTSSEEEE
T ss_pred CCCCCcccCceEEEecCCCeecCCCceeEE
Confidence 999999999999999999999999997643
No 46
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=99.95 E-value=3.2e-28 Score=234.02 Aligned_cols=105 Identities=30% Similarity=0.640 Sum_probs=93.1
Q ss_pred eEEEEcC-CCHHHHHHHHHhCCCEEEEEecccccccccccEEeCCCCCC---ccCeeEEEeeecCCCCCCCccCCccEEE
Q psy1664 385 RIAYSLP-ANEETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGGP---LGEHAIRIIGWGQEPLGEGTSSVVKYWL 460 (524)
Q Consensus 385 ~~~~~~~-~~~~~~~~~~~~~gPv~~~~~~~~~f~~y~~gi~~~~~~~~---~~~H~v~ivG~g~~~~~~~~~~~~~ywi 460 (524)
...+.++ .++++||++|+++|||+++|+++++|++|++|||..+.+.. .++|||+|||||++. +.+|||
T Consensus 111 ~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~~~f~~Y~~Giy~~~~~~~~~~~~~HaV~iVGyg~~~-------g~~yWi 183 (220)
T 8pch_A 111 KDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEEN-------GIPYWI 183 (220)
T ss_dssp EEEEECCTTCHHHHHHHHHHTCCEEEEECCCHHHHTCCSSEECCSSCCCSTTTCCEEEEEEEEEEET-------TEEEEE
T ss_pred CCEEEeCCCCHHHHHHHHHhcCCEEEEEEeccchhhcCCCcccCCcCCCCCCcCCcEEEEEEEEccC-------CeeEEE
Confidence 3445564 57999999999999999999998899999999998765432 589999999999877 889999
Q ss_pred EEcCCCCCCCCCcEEEEEeCCCccCccccceeccce
Q psy1664 461 VANSFNTNWGENGLFRIVRGQNECGIEADITAGLPK 496 (524)
Q Consensus 461 v~NSWG~~WG~~Gy~~i~~g~~~cgi~~~~~~~~p~ 496 (524)
||||||++||++|||||+||.|.|||++.+..++|.
T Consensus 184 vkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~~~~~p~ 219 (220)
T 8pch_A 184 VKNSWGPQWGMNGYFLIERGKNMCGLAACASYPIPL 219 (220)
T ss_dssp EECSBCTTSTBTTEEEEECSSCGGGTTTSCEEEEEC
T ss_pred EECCCCcCcccCCEEEEEcCCCccccCCCceeEeec
Confidence 999999999999999999999999999998877765
No 47
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=99.95 E-value=4.3e-28 Score=231.99 Aligned_cols=104 Identities=27% Similarity=0.647 Sum_probs=91.4
Q ss_pred eeeEEEEcCCCHHHHHHHHHhCCCEEEEEecccccccccccEEeCC---CCCCccCeeEEEeeecCCCCCCCccCCccEE
Q psy1664 383 FGRIAYSLPANEETIMREIFRHGPVEGSMTIYADMILYKTGIYKHV---AGGPLGEHAIRIIGWGQEPLGEGTSSVVKYW 459 (524)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~gPv~~~~~~~~~f~~y~~gi~~~~---~~~~~~~H~v~ivG~g~~~~~~~~~~~~~yw 459 (524)
+....+.++.++++||++|+++|||+++|+++ +|++|++|||.++ +....++|||+|||||+++ +++||
T Consensus 106 ~i~~~~~i~~~~~~ik~~l~~~GPV~v~i~~~-~f~~Y~~Giy~~~~~~c~~~~~~HaV~iVGyg~~~-------g~~yW 177 (214)
T 1m6d_A 106 YIQDSVELSQNEQKLAAWLAKRGPISVAINAF-GMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGQRS-------DVPFW 177 (214)
T ss_dssp CCSEEEECCSCHHHHHHHHHHHCCEEEEECTH-HHHHCCSSEECCCGGGSCTTCCCEEEEEEEEEEET-------TEEEE
T ss_pred EecCEEEeChHHHHHHHHHHhCCCEEEEEEec-hhhhcCCceecCCCCcCCCCcCCEEEEEEEEeecC-------CcEEE
Confidence 34556778889999999999999999999997 5999999999763 3444689999999999976 88999
Q ss_pred EEEcCCCCCCCCCcEEEEEeCCCccCccccceecc
Q psy1664 460 LVANSFNTNWGENGLFRIVRGQNECGIEADITAGL 494 (524)
Q Consensus 460 iv~NSWG~~WG~~Gy~~i~~g~~~cgi~~~~~~~~ 494 (524)
|||||||++||++|||||+||.|.|||++.+.+++
T Consensus 178 ivkNSWG~~WGe~Gy~~i~r~~n~Cgi~~~~~~~~ 212 (214)
T 1m6d_A 178 AIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAV 212 (214)
T ss_dssp EEECSBCTTSTBTTEEEEESSSCGGGTTTTCEEEE
T ss_pred EEEeCCCCCcccCcEEEEEcCCCccccCceeEEEE
Confidence 99999999999999999999999999999976443
No 48
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=99.95 E-value=1e-27 Score=235.31 Aligned_cols=131 Identities=44% Similarity=0.884 Sum_probs=109.3
Q ss_pred CCCCCCCCCCCccccccccCCCccccccccccceeeeecCCCHHHHHHHHHHcCCeEEEEEecccccccCCceEEcCCCC
Q psy1664 210 HSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPANEETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGG 289 (524)
Q Consensus 210 ~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~GPV~v~i~v~~~f~~Y~sGIy~~~~~~ 289 (524)
.+.|.......+.|...|...+.+.+.....+....+.++.++++||++|+++|||+|+|+++++|++|++|||..+++.
T Consensus 117 ~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gPv~~~~~~~~~f~~y~~Gi~~~~~~~ 196 (254)
T 3qsd_A 117 YPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVKNDEKAIQKEIMKYGPVEAGFTVYEDFLNYKSGIYKHITGE 196 (254)
T ss_dssp SCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEEECCSCHHHHHHHHHHHCCEEEEEEEEGGGGGCCSSEECCCSSC
T ss_pred CCCCcccccCCccccccccCCccceeeeeeeeeeeeEecCCcHHHHHHHHHHcCCEEEEEEeccccccccCCeeccCCCC
Confidence 45666555555667777777666656666666665677788999999999999999999999999999999999988776
Q ss_pred CCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCccccccccCccCCcCcCC
Q psy1664 290 PLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLFRIGCRPYEIPCERYMN 349 (524)
Q Consensus 290 ~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy~ri~~~~~~~~c~~~~~ 349 (524)
..++|||+|||||++ ++++|||||||||++|||+|||||+|+.+ .|++.+.
T Consensus 197 ~~~~Hav~iVGyg~~-------~g~~ywivkNSWG~~WG~~Gy~~i~rg~n--~CgI~~~ 247 (254)
T 3qsd_A 197 TLGGHAIRIIGWGVE-------NKAPYWLIANSWNEDWGENGYFRIVRGRD--ECSIESE 247 (254)
T ss_dssp EEEEEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTEEEEECSSC--GGGTTSS
T ss_pred CCCCeEEEEEEEeec-------CCeeEEEEEeCCCCCcccCCeEEEEcCCC--eecCCCc
Confidence 678999999999986 57899999999999999999999999864 6888654
No 49
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=99.95 E-value=1.3e-27 Score=236.05 Aligned_cols=121 Identities=47% Similarity=1.015 Sum_probs=96.5
Q ss_pred ccccccccCCCccccccccccceeeeecCCCHHHHHHHHHHcCCeEEEEEecccccccCCceEEcCCCCCCCCcEEEEEE
Q psy1664 221 PECIRKCQPGYDVSYEDDLNFGRIAYSLPANEETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGGPLGEHAIRIIG 300 (524)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~GPV~v~i~v~~~f~~Y~sGIy~~~~~~~~~~HaV~iVG 300 (524)
+.|...|...+...+..+..+....+.++.++++||++|+++|||+|+|+++++|+.|++|||.++++...++|||+|||
T Consensus 132 p~c~~~c~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~i~~~GPV~v~i~~~~~f~~Y~~Gvy~~~~~~~~~~HaV~iVG 211 (266)
T 3cbj_A 132 PKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILG 211 (266)
T ss_dssp CCCCCSCCTTCCSCTGGGCBCBSCCEECCSCHHHHHHHHHHHCCEEEEEEEEGGGGGCCSSEECCCSSCEEEEEEEEEEE
T ss_pred CccccccCCCCcceeeeeeeeeeeeEEeCCCHHHHHHHHHhcCCEEEEEEeccchhhcCCeEEecCCCCccCCeEEEEEE
Confidence 34545555444433333333433345677789999999999999999999999999999999998766656799999999
Q ss_pred eccCCCCCCCccceeEEEEeCCCCCcccccCccccccccCccCCcCcCCc
Q psy1664 301 WGQEPLGEGTSSVVKYWLVANSFNTNWGENGLFRIGCRPYEIPCERYMNG 350 (524)
Q Consensus 301 yg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy~ri~~~~~~~~c~~~~~~ 350 (524)
||++ +|++|||||||||++|||+|||||+++.. .|++....
T Consensus 212 yg~~-------~g~~yWivkNSWG~~WGe~Gy~~i~rg~n--~cgI~~~~ 252 (266)
T 3cbj_A 212 WGVE-------NGTPYWLVANSWNTDWGDNGFFKILRGQD--HCGIESEV 252 (266)
T ss_dssp EEEE-------TTEEEEEEECSBCTTSTBTTEEEEECSSC--GGGTTTSC
T ss_pred eccc-------CCceEEEEEcCCCCccCCCCEEEEEcCCC--cccccCce
Confidence 9986 57899999999999999999999999864 58886544
No 50
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=99.95 E-value=1e-27 Score=242.54 Aligned_cols=103 Identities=27% Similarity=0.651 Sum_probs=91.7
Q ss_pred EEEEcC-CCHHHHHHHHHhCCCEEEEEecccccccccccEEeCCCC-CCccCeeEEEeeecCCCCCCCccCCccEEEEEc
Q psy1664 386 IAYSLP-ANEETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAG-GPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVAN 463 (524)
Q Consensus 386 ~~~~~~-~~~~~~~~~~~~~gPv~~~~~~~~~f~~y~~gi~~~~~~-~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~N 463 (524)
.+..++ .++++||.+|+++|||+|+|+++.+|++|++|||..+.+ ...++|||+|||||+++ +.+||||||
T Consensus 224 ~~~~v~~~~e~~lk~al~~~GPV~v~i~a~~~f~~Y~~GVy~~~~c~~~~~~HaV~iVGyg~~~-------g~~yWivkN 296 (329)
T 3qt4_A 224 GYYDLPSGDENSLADAVGQAGPVAVAIDATDELQFYSGGLFYDQTCNQSDLNHGVLVVGYGSDN-------GQDYWILKN 296 (329)
T ss_dssp EEEECCTTCHHHHHHHHHHTCCEEEEECCCGGGTTEEEEEECCSSCCSSCCCEEEEEEEEEEET-------TEEEEEEEC
T ss_pred eEEEecCCCHHHHHHHHHhCCCEEEEEecChhhhhccCceeecCCCCCCcCCEEEEEEEEEeeC-------CccEEEEEe
Confidence 445665 489999999999999999999988999999999988655 35689999999999887 899999999
Q ss_pred CCCCCCCCCcEEEEEeCC-CccCccccceecccee
Q psy1664 464 SFNTNWGENGLFRIVRGQ-NECGIEADITAGLPKI 497 (524)
Q Consensus 464 SWG~~WG~~Gy~~i~~g~-~~cgi~~~~~~~~p~~ 497 (524)
|||++||++|||||+||. |.|||++.++ +|.|
T Consensus 297 SWG~~WGe~GY~~i~r~~~n~CgI~~~~~--yp~v 329 (329)
T 3qt4_A 297 SWGSGWGESGYWRQVRNYGNNCGIATAAS--YPAL 329 (329)
T ss_dssp SBCTTSTBTTEEEEESSSSSGGGTTTTCE--EEEC
T ss_pred CCCCcccCCcEEEEEeCCCCccCCCCcee--EeeC
Confidence 999999999999999998 9999999955 6653
No 51
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=99.94 E-value=1.6e-27 Score=229.02 Aligned_cols=103 Identities=27% Similarity=0.645 Sum_probs=89.7
Q ss_pred eEEEEcCCCHHHHHHHHHhCCCEEEEEecc-cccccccccEEeCC-CCCCccCeeEEEeeec----CCCCCCCccCCccE
Q psy1664 385 RIAYSLPANEETIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHV-AGGPLGEHAIRIIGWG----QEPLGEGTSSVVKY 458 (524)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~gPv~~~~~~~-~~f~~y~~gi~~~~-~~~~~~~H~v~ivG~g----~~~~~~~~~~~~~y 458 (524)
..++.++.++++||++|+++|||+++|+++ ++|++|++|||..+ +....++|||+||||| +++ +++|
T Consensus 110 ~~~~~v~~~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~~-------g~~y 182 (220)
T 2xu3_A 110 TGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESD-------NNKY 182 (220)
T ss_dssp SEEEECCSCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCSSCCCEEEEEEEEEECCCSSS-------CCEE
T ss_pred eeEEEeCCCHHHHHHHHHhcCCEEEEEeecCcccccccceEEcCCCCCCCCCCeEEEEEEcCCccccCC-------CCcE
Confidence 345567668999999999999999999997 58999999999876 4444689999999999 444 7899
Q ss_pred EEEEcCCCCCCCCCcEEEEEeCC-CccCccccceeccce
Q psy1664 459 WLVANSFNTNWGENGLFRIVRGQ-NECGIEADITAGLPK 496 (524)
Q Consensus 459 wiv~NSWG~~WG~~Gy~~i~~g~-~~cgi~~~~~~~~p~ 496 (524)
||||||||++||++|||||+|+. |.|||++.+. +|.
T Consensus 183 WivkNSWG~~WG~~Gy~~i~~~~~n~Cgi~~~~~--~p~ 219 (220)
T 2xu3_A 183 WLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAAS--YPT 219 (220)
T ss_dssp EEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCE--EEE
T ss_pred EEEEeCCCCCcccCcEEEEecCCCCcCCccccce--eee
Confidence 99999999999999999999997 8999999965 554
No 52
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=99.94 E-value=2.6e-27 Score=238.31 Aligned_cols=105 Identities=30% Similarity=0.625 Sum_probs=92.4
Q ss_pred eeEEEEcC-CCHHHHHHHHHhCCCEEEEEecccccccccccEEeCC-CCCCccCeeEEEeeecCCCCCCCccCCccEEEE
Q psy1664 384 GRIAYSLP-ANEETIMREIFRHGPVEGSMTIYADMILYKTGIYKHV-AGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLV 461 (524)
Q Consensus 384 ~~~~~~~~-~~~~~~~~~~~~~gPv~~~~~~~~~f~~y~~gi~~~~-~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv 461 (524)
...++.++ .++++||.+|+++|||+|+|+++.+|++|++|||..+ |....++|||+|||||+++ |++||||
T Consensus 199 i~~~~~v~~~~~~~i~~~l~~~GPV~v~i~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~~-------g~~yWiv 271 (310)
T 2o6x_A 199 VTGFYTVHSGSEVELKNLVGAEGPAAVAVDVESDFMMYRSGIYQSQTCSPLRVNHAVLAVGYGTQG-------GTDYWIV 271 (310)
T ss_dssp EEEEEEECSCCHHHHHHHHHHHCCEEEEECCCHHHHTEEEEEECCSSCCTTCCCEEEEEEEEEEET-------TEEEEEE
T ss_pred eCeEEEeCCCCHHHHHHHHHhcCCeEEEEecchhhhhCCCceecCCCCCCCCCCEEEEEEEEeccC-------CceEEEE
Confidence 44556665 5899999999999999999999889999999999865 4445689999999999986 8999999
Q ss_pred EcCCCCCCCCCcEEEEEeCC-CccCccccceecccee
Q psy1664 462 ANSFNTNWGENGLFRIVRGQ-NECGIEADITAGLPKI 497 (524)
Q Consensus 462 ~NSWG~~WG~~Gy~~i~~g~-~~cgi~~~~~~~~p~~ 497 (524)
|||||++||++|||||+|+. |.|||++.++ +|.+
T Consensus 272 kNSWG~~WGe~GY~~i~r~~~n~Cgi~~~~~--~p~~ 306 (310)
T 2o6x_A 272 KNSWGLSWGERGYIRMVRNRGNMCGIASLAS--LPMV 306 (310)
T ss_dssp ECSBCTTSTBTTEEEEECSSSSGGGTTTSEE--EEEE
T ss_pred EeCCCCccCCCcEEEEEcCCCCcCCccceee--EEEe
Confidence 99999999999999999997 8999999954 6665
No 53
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=99.94 E-value=1.4e-27 Score=228.66 Aligned_cols=102 Identities=29% Similarity=0.597 Sum_probs=89.9
Q ss_pred EEEEcCC-CHHHHHHHHHhCCCEEEEEecc-cccccccccEEeCCCC-CCccCeeEEEeeecCCCCCCCccCCccEEEEE
Q psy1664 386 IAYSLPA-NEETIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAG-GPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVA 462 (524)
Q Consensus 386 ~~~~~~~-~~~~~~~~~~~~gPv~~~~~~~-~~f~~y~~gi~~~~~~-~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~ 462 (524)
.++.++. ++++||++|+++|||+++|+++ ++|++|++|||..+.+ ...++|||+|||||+++ +.+|||||
T Consensus 109 ~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~~~HaV~iVGyg~~~-------g~~yWivk 181 (215)
T 3kwz_A 109 GYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQK-------GNKHWIIK 181 (215)
T ss_dssp CEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCTTCCCEEEEEEEEEEET-------TEEEEEEE
T ss_pred ceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccCCeECCCCCCCChhhCEEEEEEEeccC-------CceEEEEE
Confidence 3445553 8999999999999999999997 6899999999987655 45689999999999886 88999999
Q ss_pred cCCCCCCCCCcEEEEEeCC-CccCccccceeccce
Q psy1664 463 NSFNTNWGENGLFRIVRGQ-NECGIEADITAGLPK 496 (524)
Q Consensus 463 NSWG~~WG~~Gy~~i~~g~-~~cgi~~~~~~~~p~ 496 (524)
||||++||++|||||+|+. |.|||++.++ +|.
T Consensus 182 NSWG~~WG~~Gy~~i~r~~~n~Cgi~~~~~--~p~ 214 (215)
T 3kwz_A 182 NSWGENWGNKGYILMARNKNNACGIANLAS--FPK 214 (215)
T ss_dssp CSBCTTSTBTTEEEEESSSSSGGGTTSSCE--EEC
T ss_pred CCcCcccccCCEEEEecCCCCccCcCCcee--eee
Confidence 9999999999999999997 9999999855 564
No 54
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=99.94 E-value=2.2e-27 Score=227.77 Aligned_cols=102 Identities=30% Similarity=0.640 Sum_probs=90.5
Q ss_pred EEEcC-CCHHHHHHHHHhCCCEEEEEecc-cccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEcC
Q psy1664 387 AYSLP-ANEETIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANS 464 (524)
Q Consensus 387 ~~~~~-~~~~~~~~~~~~~gPv~~~~~~~-~~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~NS 464 (524)
+..++ .++++||++|+++|||+++|++. ++|++|++|||..+.+...++|||+|||||+++ +++|||||||
T Consensus 114 ~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~~HaV~iVGyg~~~-------g~~ywivkNS 186 (218)
T 3ovx_A 114 YTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLN-------GKEYWLVKNS 186 (218)
T ss_dssp EEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCSSEECCTTCCSCCCEEEEEEEEEEET-------TEEEEEEECS
T ss_pred EEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcccCceecCCCCCcccCcEEEEEEEeccC-------CceEEEEECC
Confidence 34554 48999999999999999999996 489999999999876666789999999999886 8899999999
Q ss_pred CCCCCCCCcEEEEEeCC-CccCccccceecccee
Q psy1664 465 FNTNWGENGLFRIVRGQ-NECGIEADITAGLPKI 497 (524)
Q Consensus 465 WG~~WG~~Gy~~i~~g~-~~cgi~~~~~~~~p~~ 497 (524)
||++||++|||||+|+. |.|||++.++ +|.|
T Consensus 187 WG~~WG~~Gy~~i~~~~~n~cgi~~~~~--~p~~ 218 (218)
T 3ovx_A 187 WGHNFGEEGYIRMARNKGNHCGIASFPS--YPEI 218 (218)
T ss_dssp BCTTSTBTTEEEEECSSSSGGGTTTSCE--EEEC
T ss_pred CCCccccCCEEEEecCCCCcccccCcee--eeeC
Confidence 99999999999999998 9999999955 6653
No 55
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=99.94 E-value=2.4e-27 Score=238.24 Aligned_cols=107 Identities=23% Similarity=0.332 Sum_probs=94.1
Q ss_pred eEEEEcC-CCHHHHHHHHHh-CCCEEEEEeccc--ccccccccEEeCCCCC--CccCeeEEEeeecCCCCCCCccCCccE
Q psy1664 385 RIAYSLP-ANEETIMREIFR-HGPVEGSMTIYA--DMILYKTGIYKHVAGG--PLGEHAIRIIGWGQEPLGEGTSSVVKY 458 (524)
Q Consensus 385 ~~~~~~~-~~~~~~~~~~~~-~gPv~~~~~~~~--~f~~y~~gi~~~~~~~--~~~~H~v~ivG~g~~~~~~~~~~~~~y 458 (524)
..+..++ .++++||.+|++ +|||+|+|+++. +|++|++|||..+.+. .. +|||+|||||+++ |++|
T Consensus 194 ~~y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~~~~f~~Y~~GVy~~~~c~~~~~-~HaV~iVGyg~~~-------g~~y 265 (312)
T 1xkg_A 194 SNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDNGYQPN-YHAVNIVGYSNAQ-------GVDY 265 (312)
T ss_dssp SEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCCCCSSCCE-EEEEEEEEEEEET-------TEEE
T ss_pred eeEEEeCCCCHHHHHHHHHhcCCCEEEEEEecccccccccCCcEEcCCCCCCCcC-ceEEEEEEEeccC-------CceE
Confidence 3445665 489999999999 999999999987 8999999999876443 36 9999999999886 8999
Q ss_pred EEEEcCCCCCCCCCcEEEEEeCCCccCccccceeccceecc
Q psy1664 459 WLVANSFNTNWGENGLFRIVRGQNECGIEADITAGLPKIGL 499 (524)
Q Consensus 459 wiv~NSWG~~WG~~Gy~~i~~g~~~cgi~~~~~~~~p~~~~ 499 (524)
||||||||++||++|||||+|+.|.|||++.+++++|..+.
T Consensus 266 WivkNSWG~~WGe~GY~~i~r~~n~CgI~~~~~~~~~~~~~ 306 (312)
T 1xkg_A 266 WIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVILGQTG 306 (312)
T ss_dssp EEEECSBCTTSTBTTEEEEECSSCGGGTTTCCEEEECTTCC
T ss_pred EEEEeCCCCcccCCcEEEEEcCCCcccccceeEEeeccCCC
Confidence 99999999999999999999999999999998877765543
No 56
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=99.94 E-value=3.2e-27 Score=238.18 Aligned_cols=102 Identities=29% Similarity=0.620 Sum_probs=90.1
Q ss_pred EEEEcC-CCHHHHHHHHHhCCCEEEEEecc-cccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEc
Q psy1664 386 IAYSLP-ANEETIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVAN 463 (524)
Q Consensus 386 ~~~~~~-~~~~~~~~~~~~~gPv~~~~~~~-~~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~N 463 (524)
.++.++ .++++||.+|+++|||+|+|+++ .+|++|++|||..+.+...++|||+|||||+++ +.+||||||
T Consensus 210 ~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~c~~~~~HaV~iVGyg~~~-------g~~yWivkN 282 (315)
T 2c0y_A 210 KYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLN-------GKEYWLVKN 282 (315)
T ss_dssp EEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTEEEEEECCTTCCSCCCEEEEEEEEEEET-------TEEEEEEEC
T ss_pred CeEEeCCCCHHHHHHHHHHcCCEEEEEecCchhhhccCCCcccCCCCCCcCCEEEEEEEEeecC-------CCcEEEEEc
Confidence 445665 48999999999999999999997 689999999998874444789999999999886 889999999
Q ss_pred CCCCCCCCCcEEEEEeCC-CccCccccceeccce
Q psy1664 464 SFNTNWGENGLFRIVRGQ-NECGIEADITAGLPK 496 (524)
Q Consensus 464 SWG~~WG~~Gy~~i~~g~-~~cgi~~~~~~~~p~ 496 (524)
|||++||++|||||+|+. |.|||++.++ +|.
T Consensus 283 SWG~~WGe~GY~~i~r~~~n~CgI~~~~~--~p~ 314 (315)
T 2c0y_A 283 SWGHNFGEEGYIRMARNKGNHCGIASFPS--YPE 314 (315)
T ss_dssp SBCTTSTBTTEEEEECSSSSGGGTTTSCE--EEE
T ss_pred CCCCCcCCCcEEEEEcCCCCccCcCceeE--Eee
Confidence 999999999999999995 9999999965 554
No 57
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=99.94 E-value=3.5e-27 Score=237.84 Aligned_cols=102 Identities=29% Similarity=0.604 Sum_probs=89.9
Q ss_pred EEEEcC-CCHHHHHHHHHhCCCEEEEEecc-cccccccccEEeCC-CCCCccCeeEEEeeecCCCCCCCccCCccEEEEE
Q psy1664 386 IAYSLP-ANEETIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHV-AGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVA 462 (524)
Q Consensus 386 ~~~~~~-~~~~~~~~~~~~~gPv~~~~~~~-~~f~~y~~gi~~~~-~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~ 462 (524)
.++.++ .++++||++|+++|||+|+|+++ .+|++|++|||..+ |....++|||+|||||+++ +.+|||||
T Consensus 208 ~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~~-------g~~yWivk 280 (314)
T 1by8_A 208 GYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQK-------GNKHWIIK 280 (314)
T ss_dssp CEEECCSSCHHHHHHHHHHHCCEEEEECCCSHHHHTEEEECBCCTTCCSSCCCEEEEEEEEEEET-------TEEEEEEE
T ss_pred cEEEecCCCHHHHHHHHHHcCCEEEEEEeChHHhhhccCceecCCCCCCCCCCeEEEEEEEeccC-------CceEEEEE
Confidence 445665 48999999999999999999997 68999999999877 4444689999999999886 88999999
Q ss_pred cCCCCCCCCCcEEEEEeCC-CccCccccceeccce
Q psy1664 463 NSFNTNWGENGLFRIVRGQ-NECGIEADITAGLPK 496 (524)
Q Consensus 463 NSWG~~WG~~Gy~~i~~g~-~~cgi~~~~~~~~p~ 496 (524)
||||++||++|||||+||. |.|||++.++ +|.
T Consensus 281 NSWG~~WGe~GY~~i~r~~~n~CgI~~~~~--~p~ 313 (314)
T 1by8_A 281 NSWGENWGNKGYILMARNKNNACGIANLAS--FPK 313 (314)
T ss_dssp CSBTTTSTBTTEEEECCSSSCGGGTTSSCE--EEC
T ss_pred cCCCCCcCcCCEEEEEcCCCCcCCccCeeE--Eee
Confidence 9999999999999999995 9999999965 554
No 58
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=99.94 E-value=1.1e-26 Score=222.21 Aligned_cols=101 Identities=26% Similarity=0.524 Sum_probs=87.0
Q ss_pred EEEEcC-CCHHHHHHHHHhCCCEEEEEeccc-ccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEc
Q psy1664 386 IAYSLP-ANEETIMREIFRHGPVEGSMTIYA-DMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVAN 463 (524)
Q Consensus 386 ~~~~~~-~~~~~~~~~~~~~gPv~~~~~~~~-~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~N 463 (524)
.+..++ .++++||++|++ |||+++|+++. +|++|++|||..++.. .++|||+|||||+++ +++||||||
T Consensus 108 ~~~~v~~~~~~~ik~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~-~~~HaV~iVGyg~~~-------g~~yWivkN 178 (215)
T 1iwd_A 108 GFQRVTRNNESALQSAVAS-QPVSVTVEAAGAPFQHYSSGIFTGPCGT-AQNHGVVIVGYGTQS-------GKNYWIVRN 178 (215)
T ss_dssp EEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECCCCCC-CCCEEEEEEEEEEET-------TEEEEEEEC
T ss_pred cEEEeCCCcHHHHHHHHHh-CCEEEEEecCCcchhhcCCceECCCCCC-cCCEEEEEEEEeccC-------CccEEEEEe
Confidence 334554 478899999876 99999999976 7999999999876554 579999999999886 889999999
Q ss_pred CCCCCCCCCcEEEEEeCC----CccCccccceecccee
Q psy1664 464 SFNTNWGENGLFRIVRGQ----NECGIEADITAGLPKI 497 (524)
Q Consensus 464 SWG~~WG~~Gy~~i~~g~----~~cgi~~~~~~~~p~~ 497 (524)
|||++||++|||||+|+. |.|||++.+. +|.+
T Consensus 179 SWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~--~p~~ 214 (215)
T 1iwd_A 179 SWGQNWGNQGYIWMERNVASSAGLCGIAQLPS--YPTK 214 (215)
T ss_dssp SBCTTSTBTTEEEEECSCSSTTCGGGTTSSCE--EEEC
T ss_pred CCCCCcCCCcEEEEEcCCCCCCCCCCccccce--eeee
Confidence 999999999999999997 8999999854 5654
No 59
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=99.94 E-value=4.7e-27 Score=238.24 Aligned_cols=103 Identities=30% Similarity=0.567 Sum_probs=90.9
Q ss_pred EEEEcC-CCHHHHHHHHHhCCCEEEEEecccccccccccEEeCCCC-CCccCeeEEEeeecCCCCCCCccCCccEEEEEc
Q psy1664 386 IAYSLP-ANEETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAG-GPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVAN 463 (524)
Q Consensus 386 ~~~~~~-~~~~~~~~~~~~~gPv~~~~~~~~~f~~y~~gi~~~~~~-~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~N 463 (524)
.+..++ .++++||.+|+++|||+|+|++..+|++|++|||..+.+ ...++|||+|||||+++ +.+||||||
T Consensus 226 ~~~~v~~~~e~~lk~al~~~GPV~v~i~a~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~~-------g~~yWivkN 298 (331)
T 3qj3_A 226 GYVYLSGPDENMLADMVATKGPVAVAFDADDPFGSYSGGVYYNPTCETNKFTHAVLIVGYGNEN-------GQDYWLVKN 298 (331)
T ss_dssp EEEEESSCCHHHHHHHHHHHCCEEEEECCCTTGGGEEEEEECCTTCCSSCCCEEEEEEEEEEET-------TEEEEEEEC
T ss_pred EEEEeCCCCHHHHHHHHHhCCCEEEEEEcccccccccCceEeCCCCCCCcCCEEEEEEEEeccC-------CceEEEEEc
Confidence 344555 489999999999999999999987799999999988655 35689999999999876 899999999
Q ss_pred CCCCCCCCCcEEEEEeCC-CccCccccceecccee
Q psy1664 464 SFNTNWGENGLFRIVRGQ-NECGIEADITAGLPKI 497 (524)
Q Consensus 464 SWG~~WG~~Gy~~i~~g~-~~cgi~~~~~~~~p~~ 497 (524)
|||++||++|||||+||. |.|||++.+. +|.|
T Consensus 299 SWG~~WGe~GY~~i~r~~~n~CgI~~~~~--~p~v 331 (331)
T 3qj3_A 299 SWGDGWGLDGYFKIARNANNHCGIAGVAS--VPTL 331 (331)
T ss_dssp SBCTTSTBTTEEEEECSSSSGGGTTTSCE--EEEC
T ss_pred CCCCCcCCCCEEEEEcCCCCccCcCCcee--eeeC
Confidence 999999999999999998 9999999955 6653
No 60
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=99.94 E-value=3.8e-27 Score=237.74 Aligned_cols=104 Identities=28% Similarity=0.648 Sum_probs=90.2
Q ss_pred eEEEEcCCCHHHHHHHHHhCCCEEEEEecc-cccccccccEEeCC-CCCCccCeeEEEeeec---CCCCCCCccCCccEE
Q psy1664 385 RIAYSLPANEETIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHV-AGGPLGEHAIRIIGWG---QEPLGEGTSSVVKYW 459 (524)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~gPv~~~~~~~-~~f~~y~~gi~~~~-~~~~~~~H~v~ivG~g---~~~~~~~~~~~~~yw 459 (524)
..++.++.++++||.+|+++|||+|+|+++ .+|++|++|||..+ |....++|||+||||| ++. .+++||
T Consensus 206 ~~~~~v~~~~~~ik~~l~~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~------~g~~yW 279 (316)
T 1cs8_A 206 AGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTES------DNNKYW 279 (316)
T ss_dssp CCEEECCSCHHHHHHHHHHHCCEEEEECCCSHHHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSS------CCEEEE
T ss_pred ccEEEeCCCHHHHHHHHHhcCCEEEEEecCChhhccccCceECCCCCCCCCCCEEEEEEEecCCcccC------CCCcEE
Confidence 345567668999999999999999999997 48999999999876 4444689999999999 652 288999
Q ss_pred EEEcCCCCCCCCCcEEEEEeCC-CccCccccceeccce
Q psy1664 460 LVANSFNTNWGENGLFRIVRGQ-NECGIEADITAGLPK 496 (524)
Q Consensus 460 iv~NSWG~~WG~~Gy~~i~~g~-~~cgi~~~~~~~~p~ 496 (524)
|||||||++||++|||||+|+. |.|||++.++ +|.
T Consensus 280 ivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~--~p~ 315 (316)
T 1cs8_A 280 LVKNSWGEEWGMGGYVKMAKDRRNHCGIASAAS--YPT 315 (316)
T ss_dssp EEECSBCTTSTBTTEEEEECSSSSGGGTTTSCE--EEC
T ss_pred EEEcCCCCCcccCCEEEEECCCCCccCccceee--Eee
Confidence 9999999999999999999997 8999999955 554
No 61
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=99.94 E-value=1.3e-26 Score=222.84 Aligned_cols=105 Identities=26% Similarity=0.517 Sum_probs=89.2
Q ss_pred eEEEEcCCCHHHHHHHHHhCCCEEEEEeccc-ccccccc-cEEeCCCCCC---ccCeeEEEeeecCCCCCCCccCCccEE
Q psy1664 385 RIAYSLPANEETIMREIFRHGPVEGSMTIYA-DMILYKT-GIYKHVAGGP---LGEHAIRIIGWGQEPLGEGTSSVVKYW 459 (524)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~gPv~~~~~~~~-~f~~y~~-gi~~~~~~~~---~~~H~v~ivG~g~~~~~~~~~~~~~yw 459 (524)
..++.++.++++||++| .+|||+++|+++. +|++|++ |||..+.+.. .++|||+|||||++.. +.+||
T Consensus 107 ~~~~~v~~~~~~i~~~l-~~GPV~v~i~~~~~~f~~Y~~~Giy~~~~~~~~~~~~~HaV~iVGyg~~~~------g~~yW 179 (222)
T 3u8e_A 107 DGYTNVPNSSSALLDAV-AKQPVSVNIYTSSTSFQLYTGPGIFAGSSCSDDPATVDHTVLIVGYGSNGT------NADYW 179 (222)
T ss_dssp CEEEECCSCHHHHHHHH-HHSCEEEEECCCSHHHHTCCCSSCBCCTTCCCCGGGCCEEEEEEEEEESST------TCEEE
T ss_pred ccEEEeCCcHHHHHHHH-hCCCEEEEEEecChhhhcEeCCceECCCcccCCCCcCCEEEEEEEEeecCC------CCcEE
Confidence 34556667899999999 5799999999975 8999999 9998844433 5899999999998752 77999
Q ss_pred EEEcCCCCCCCCCcEEEEEeCCC----ccCccccceeccceec
Q psy1664 460 LVANSFNTNWGENGLFRIVRGQN----ECGIEADITAGLPKIG 498 (524)
Q Consensus 460 iv~NSWG~~WG~~Gy~~i~~g~~----~cgi~~~~~~~~p~~~ 498 (524)
|||||||++||++|||||+||.| .|||++.++ +|.+.
T Consensus 180 ivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~--~p~~~ 220 (222)
T 3u8e_A 180 IVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGS--YPTKS 220 (222)
T ss_dssp EEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCE--EEECC
T ss_pred EEECCCCCCcccCCEEEEEcCCCCCCCcCCccccce--EEEEe
Confidence 99999999999999999999987 999999965 66643
No 62
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=99.94 E-value=1.4e-26 Score=221.73 Aligned_cols=101 Identities=30% Similarity=0.516 Sum_probs=87.3
Q ss_pred EEEEcC-CCHHHHHHHHHhCCCEEEEEecc-cccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEc
Q psy1664 386 IAYSLP-ANEETIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVAN 463 (524)
Q Consensus 386 ~~~~~~-~~~~~~~~~~~~~gPv~~~~~~~-~~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~N 463 (524)
.+..++ .++++||++|++ |||+++|+++ ++|++|++|||..++.. .++|||+|||||++. +.+||||||
T Consensus 109 ~y~~v~~~~~~~i~~~l~~-GPV~v~~~~~~~~f~~Y~~Giy~~~~~~-~~~HaV~iVGyg~~~-------g~~ywivkN 179 (216)
T 1ppo_A 109 GVGRVQPNNEGNLLNAIAK-QPVSVVVESKGRPFQLYKGGIFEGPCGT-KVDHAVTAVGYGKSG-------GKGYILIKN 179 (216)
T ss_dssp EEEECCSSCHHHHHHHHHH-SCEEEEECCCSHHHHHCCSSEECCSCCS-CCCEEEEEEEEEEET-------TEEEEEEEC
T ss_pred cEEEECCCCHHHHHHHHHh-CCEEEEEecCChhhhhcCCceECCCCCC-CCCEEEEEEEeeccC-------CccEEEEEe
Confidence 334555 478999999987 9999999996 68999999999876554 479999999999987 889999999
Q ss_pred CCCCCCCCCcEEEEEeCC----CccCccccceecccee
Q psy1664 464 SFNTNWGENGLFRIVRGQ----NECGIEADITAGLPKI 497 (524)
Q Consensus 464 SWG~~WG~~Gy~~i~~g~----~~cgi~~~~~~~~p~~ 497 (524)
|||++||++|||||+|+. |.|||++.+. +|.+
T Consensus 180 SWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~--~p~~ 215 (216)
T 1ppo_A 180 SWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSY--YPTK 215 (216)
T ss_dssp SBCSSSTBTTEEEEECCCSSSSCGGGTTSCCE--EEEC
T ss_pred CCCCCcccCcEEEEEcCCCCCCCcCcccccee--eEee
Confidence 999999999999999985 8999999955 5654
No 63
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=99.94 E-value=6.5e-27 Score=236.62 Aligned_cols=96 Identities=44% Similarity=0.902 Sum_probs=85.6
Q ss_pred eeecCCCHHHHHHHHHHcCCeEEEEEecccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCC
Q psy1664 245 AYSLPANEETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFN 324 (524)
Q Consensus 245 ~~~~~~~~~~ik~~l~~~GPV~v~i~v~~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG 324 (524)
.|.+ .++++||++|+++|||+|+|+++++|++|++|||..+++...++|||+|||||++ ++++|||||||||
T Consensus 212 ~y~v-~~~~~i~~~i~~~GPV~v~i~~~~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~-------~g~~YWivkNSWG 283 (325)
T 3hhi_A 212 SYAL-QGEDDYMRELFFRGPFEVAFDVYEDFIAYNSGVYHHVSGQYLGGHAVRLVGWGTS-------NGVPYWKIANSWN 283 (325)
T ss_dssp EEEE-CSHHHHHHHHHHHCCEEEEEEEEHHHHTCCSSEECCCSCCEEEEEEEEEEEEEEE-------TTEEEEEEECSBC
T ss_pred ceEe-CCHHHHHHHHHHCCCEEEEEEeccccccccCceecCCCCCCCCCEEEEEEEEEec-------CCceEEEEEeCCC
Confidence 3445 7899999999999999999999999999999999988776678999999999976 5799999999999
Q ss_pred CcccccCccccccccCccCCcCcCCc
Q psy1664 325 TNWGENGLFRIGCRPYEIPCERYMNG 350 (524)
Q Consensus 325 ~~WGe~Gy~ri~~~~~~~~c~~~~~~ 350 (524)
++|||+|||||+|+.+ .|++.+..
T Consensus 284 ~~WGe~GY~~i~rg~n--~CGI~~~~ 307 (325)
T 3hhi_A 284 TEWGMDGYFLIRRGSS--ECGIEDGG 307 (325)
T ss_dssp TTSTBTTEEEEECSSC--GGGTTSCE
T ss_pred CCcccCCEEEEEcCCC--eecCccce
Confidence 9999999999999864 68886543
No 64
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=99.93 E-value=3.2e-26 Score=223.30 Aligned_cols=101 Identities=29% Similarity=0.568 Sum_probs=88.3
Q ss_pred EEcC-CCHHHHHHHHHh---CCCEEEEEecccccccccccEEeCC-CCCCc-cCeeEEEeeecCCCCCCCccCCccEEEE
Q psy1664 388 YSLP-ANEETIMREIFR---HGPVEGSMTIYADMILYKTGIYKHV-AGGPL-GEHAIRIIGWGQEPLGEGTSSVVKYWLV 461 (524)
Q Consensus 388 ~~~~-~~~~~~~~~~~~---~gPv~~~~~~~~~f~~y~~gi~~~~-~~~~~-~~H~v~ivG~g~~~~~~~~~~~~~ywiv 461 (524)
+.++ .++++||++|++ +|||+++|++ ++|++|++|||..+ +.... ++|||+|||||+++ +++||||
T Consensus 115 ~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~-~~f~~Y~~Giy~~~~c~~~~~~~HaV~iVGyg~~~-------g~~yWiv 186 (246)
T 2b1m_A 115 ILSNESTESEAESSLQSFVLEQPISVSIDA-KDFHFYSGGIYDGGNCSSPYGINHFVLIVGYGSED-------GVDYWIA 186 (246)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHSCEEEEECC-TTGGGCCSSEECCTTCCSSCCCCEEEEEEEEEEET-------TEEEEEE
T ss_pred eecCCChHHHHHHHHHhhccCCCEEEEEEc-chhhcccceeecCCCCCCCCcCceEEEEEEEeccC-------CceEEEE
Confidence 4554 488999999999 6999999999 89999999999874 44333 89999999999886 8899999
Q ss_pred EcCCCCCCCCCcEEEEEeCC----CccCccccceeccceec
Q psy1664 462 ANSFNTNWGENGLFRIVRGQ----NECGIEADITAGLPKIG 498 (524)
Q Consensus 462 ~NSWG~~WG~~Gy~~i~~g~----~~cgi~~~~~~~~p~~~ 498 (524)
|||||++||++|||||+|+. |.|||++.++ +|.+.
T Consensus 187 kNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~~--~p~~~ 225 (246)
T 2b1m_A 187 KNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFAS--YPIIE 225 (246)
T ss_dssp ECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEEE--EEECC
T ss_pred EeCCCCcccCCcEEEEEcCCCCCCccccccceee--EEEec
Confidence 99999999999999999997 8999999855 66654
No 65
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=99.93 E-value=2.1e-26 Score=220.73 Aligned_cols=102 Identities=25% Similarity=0.507 Sum_probs=87.5
Q ss_pred EEEEcC-CCHHHHHHHHHhCCCEEEEEecc-cccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEc
Q psy1664 386 IAYSLP-ANEETIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVAN 463 (524)
Q Consensus 386 ~~~~~~-~~~~~~~~~~~~~gPv~~~~~~~-~~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~N 463 (524)
.+..++ .++++||++|++ |||+++|+++ ++|++|++|||..++.. .++|+|+|||||++. +++||||||
T Consensus 109 ~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~~~~~-~~~HaV~iVGyg~~~-------g~~yWivkN 179 (218)
T 1yal_A 109 GYKRVPSNCETSFLGALAN-QPLSVLVEAGGKPFQLYKSGVFDGPCGT-KLDHAVTAVGYGTSD-------GKNYIIIKN 179 (218)
T ss_dssp EEEECCSSBHHHHHHHHTT-SCEEEEECCCSHHHHTCCSSEECCSCCS-CCCEEEEEEEEEEET-------TEEEEEEEC
T ss_pred eEEEeCCCCHHHHHHHHHh-CCEEEEEeccchhccccCCceECCCCCC-CCCEEEEEEEeeccC-------CccEEEEEe
Confidence 334555 378889988876 9999999996 78999999999876554 479999999999987 889999999
Q ss_pred CCCCCCCCCcEEEEEeCC----CccCccccceeccceec
Q psy1664 464 SFNTNWGENGLFRIVRGQ----NECGIEADITAGLPKIG 498 (524)
Q Consensus 464 SWG~~WG~~Gy~~i~~g~----~~cgi~~~~~~~~p~~~ 498 (524)
|||++||++|||||+|+. |.|||++.+. +|.+.
T Consensus 180 SWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~--~p~~~ 216 (218)
T 1yal_A 180 SWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSY--YPFKG 216 (218)
T ss_dssp SBCTTSTBTTEEEEECCCSBSCCGGGTTSSCE--EEECC
T ss_pred CCCCCcccCcEEEEECCCCCCCCcccccccee--eEEEe
Confidence 999999999999999985 8999999954 66653
No 66
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=99.93 E-value=2.5e-26 Score=220.74 Aligned_cols=102 Identities=31% Similarity=0.620 Sum_probs=86.9
Q ss_pred EEEEcC-CCHHHHHHHHHhCCCEEEEEecc-cccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEc
Q psy1664 386 IAYSLP-ANEETIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVAN 463 (524)
Q Consensus 386 ~~~~~~-~~~~~~~~~~~~~gPv~~~~~~~-~~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~N 463 (524)
.+..++ .++++|+++| .+|||+++|++. ++|++|++|||..++.. .++|||+|||||+++ +++||||||
T Consensus 112 ~~~~v~~~~~~~l~~~l-~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~-~~~HaV~iVGyg~~~-------g~~yWivkN 182 (220)
T 3p5u_A 112 TYENVPYNNEWALQTAV-AYQPVSVALEAAGYNFQHYSSGIFTGPCGT-AVDHAVTIVGYGTEG-------GIDYWIVKN 182 (220)
T ss_dssp EEEECCTTCHHHHHHHH-TTSCEEEEECCCSHHHHTCCSSEECCCCCC-SCCEEEEEEEEEEET-------TEEEEEEEC
T ss_pred cEEEeCCCcHHHHHHHH-hcCCEEEEEecCchhhccccCceECCCCCC-ccceEEEEEEEecCC-------CceEEEEEC
Confidence 445564 4677888877 789999999996 68999999999876544 479999999999876 889999999
Q ss_pred CCCCCCCCCcEEEEEeCCC---ccCccccceeccceec
Q psy1664 464 SFNTNWGENGLFRIVRGQN---ECGIEADITAGLPKIG 498 (524)
Q Consensus 464 SWG~~WG~~Gy~~i~~g~~---~cgi~~~~~~~~p~~~ 498 (524)
|||++||++|||||+||.| .|||++.++ +|.+.
T Consensus 183 SWG~~WGe~Gy~~i~r~~~~~~~Cgi~~~~~--~p~~~ 218 (220)
T 3p5u_A 183 SWGTTWGEEGYMRIQRNVGGVGQCGIAKKAS--YPVKY 218 (220)
T ss_dssp SBCTTSTBTTEEEEECCCCTTCGGGTTSSCE--EEECS
T ss_pred CCCCCcccCCEEEEECCCCCCCccCcccccc--eEEEe
Confidence 9999999999999999987 999999966 55543
No 67
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=99.93 E-value=3.2e-26 Score=220.02 Aligned_cols=102 Identities=30% Similarity=0.627 Sum_probs=87.4
Q ss_pred EEEEcCC-CHHHHHHHHHhCCCEEEEEecc-cccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEc
Q psy1664 386 IAYSLPA-NEETIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVAN 463 (524)
Q Consensus 386 ~~~~~~~-~~~~~~~~~~~~gPv~~~~~~~-~~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~N 463 (524)
.+..++. ++++||++|++ |||+++|+++ .+|++|++|||..++.. .++|||+|||||+++ +++||||||
T Consensus 111 ~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~~~~~-~~~HaV~iVGyg~~~-------g~~yWivkN 181 (221)
T 1cqd_A 111 SYENVPSHNEQSLQKAVAN-QPVSVTMDAAGRDFQLYRSGIFTGSCNI-SANHALTVVGYGTEN-------DKDFWIVKN 181 (221)
T ss_dssp EEEECCSSCHHHHHHHHTT-SCEEEEECCCSHHHHTCCSSEECCCCCC-CCCEEEEEEEEEEET-------TEEEEEEEC
T ss_pred cEEEeCCchHHHHHHHHHh-CCEEEEEeccCcccccccCccccCCCCC-cCCeEEEEEEEcccC-------CCcEEEEEe
Confidence 3344554 68899998865 9999999997 68999999999876554 589999999999886 889999999
Q ss_pred CCCCCCCCCcEEEEEeCC----CccCccccceeccceec
Q psy1664 464 SFNTNWGENGLFRIVRGQ----NECGIEADITAGLPKIG 498 (524)
Q Consensus 464 SWG~~WG~~Gy~~i~~g~----~~cgi~~~~~~~~p~~~ 498 (524)
|||++||++|||||+|+. |.|||++.+. +|.+.
T Consensus 182 SWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~--~p~~~ 218 (221)
T 1cqd_A 182 SWGKNWGESGYIRAERNIENPDGKCGITRFAS--YPVKK 218 (221)
T ss_dssp SBCTTSTBTTEEEEECSCSSTTCGGGTTSSCE--EEECC
T ss_pred CCCCCcccCCEEEEEcCCCCCCcccceeeeee--EEEec
Confidence 999999999999999983 8999999954 67654
No 68
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=99.93 E-value=3e-26 Score=231.59 Aligned_cols=101 Identities=29% Similarity=0.494 Sum_probs=87.7
Q ss_pred EEEEcCC-CHHHHHHHHHhCCCEEEEEecc-cccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEc
Q psy1664 386 IAYSLPA-NEETIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVAN 463 (524)
Q Consensus 386 ~~~~~~~-~~~~~~~~~~~~gPv~~~~~~~-~~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~N 463 (524)
.++.++. ++++|+++|++ |||+|+|+++ .+|++|++|||.++|.. .++|+|+|||||+++ |.+||||||
T Consensus 215 ~~~~v~~~~e~~l~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~-~~~HaV~iVGyg~~~-------g~~yWivkN 285 (322)
T 1pci_A 215 GVGRVQPNNEGNLLNAIAK-QPVSVVVESKGRPFQLYKGGIFEGPCGT-KVDGAVTAVGYGKSG-------GKGYILIKN 285 (322)
T ss_dssp CEEECCSSBHHHHHHHHHH-SCEEEEECTTCHHHHTEEEEEECCSCCS-CCCEEEEEEEEEEET-------TEEEEEEEC
T ss_pred eEEEeCCCcHHHHHHHHHH-CCEEEEEecccccccccCCeEeCCCCCC-CCCEEEEEEEEeccC-------CccEEEEEe
Confidence 3445654 78899999986 9999999996 68999999999876554 479999999999987 889999999
Q ss_pred CCCCCCCCCcEEEEEeCC----CccCccccceecccee
Q psy1664 464 SFNTNWGENGLFRIVRGQ----NECGIEADITAGLPKI 497 (524)
Q Consensus 464 SWG~~WG~~Gy~~i~~g~----~~cgi~~~~~~~~p~~ 497 (524)
|||++||++|||||+|+. |.|||++.++ +|.+
T Consensus 286 SWG~~WGe~GY~~i~r~~~~~~n~CgI~~~~~--yp~~ 321 (322)
T 1pci_A 286 SWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSY--YPTK 321 (322)
T ss_dssp SBCSSSTBTTEEEEECCCSBSSCGGGGGGCCE--EECC
T ss_pred CCCCcccCCeEEEEEcCCCCCCCcCCccccee--EEEe
Confidence 999999999999999996 8999999954 6654
No 69
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=99.93 E-value=2.2e-26 Score=221.44 Aligned_cols=99 Identities=25% Similarity=0.403 Sum_probs=86.9
Q ss_pred EEEEc-CCCHHHHHHHHHh-CCCEEEEEec--ccccccccccEEeCC-CCCCccCeeEEEeeecCCCCCCCccCCccEEE
Q psy1664 386 IAYSL-PANEETIMREIFR-HGPVEGSMTI--YADMILYKTGIYKHV-AGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWL 460 (524)
Q Consensus 386 ~~~~~-~~~~~~~~~~~~~-~gPv~~~~~~--~~~f~~y~~gi~~~~-~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywi 460 (524)
.+..+ +.++++||++|++ +|||+++|.+ .++|++|++|||... ++...++|||+|||||++. +++|||
T Consensus 115 ~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~~gi~~~~~~~~~~~~HaV~iVGyg~~~-------g~~ywi 187 (222)
T 3f5v_A 115 NYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDNGYQPNYHAVNIVGYSNAQ-------GVDYWI 187 (222)
T ss_dssp EEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCCCCSSSCEEEEEEEEEEEEET-------TEEEEE
T ss_pred cEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhhhccCCCceecCCCCCCccCcEEEEEEEeccC-------CCEEEE
Confidence 34455 4689999999999 9999999998 468999999987543 4456689999999999876 889999
Q ss_pred EEcCCCCCCCCCcEEEEEeCCCccCccccce
Q psy1664 461 VANSFNTNWGENGLFRIVRGQNECGIEADIT 491 (524)
Q Consensus 461 v~NSWG~~WG~~Gy~~i~~g~~~cgi~~~~~ 491 (524)
||||||++||++|||||+||.|.|||++.++
T Consensus 188 vkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~~ 218 (222)
T 3f5v_A 188 VRNSWDTNWGDNGYGYFAANIDLMMIEEYPY 218 (222)
T ss_dssp EECSBCTTSTBTTEEEEECSSCGGGTTTSCE
T ss_pred EEcCCCCCcccCCEEEEEcCCCeecCCCcee
Confidence 9999999999999999999999999999965
No 70
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=99.93 E-value=6.4e-26 Score=216.68 Aligned_cols=99 Identities=30% Similarity=0.566 Sum_probs=84.8
Q ss_pred eEEEEcCCCHHHHHHHHHhCCCEEEEEecc-cccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEc
Q psy1664 385 RIAYSLPANEETIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVAN 463 (524)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~gPv~~~~~~~-~~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~N 463 (524)
..++.++.++++++++++.+|||+++|+++ ++|++|++|||..++ ...++|||+|||||+ +||||||
T Consensus 108 ~~~~~v~~~~~~~~~~~~~~GPV~v~i~~~~~~f~~y~~Giy~~~~-~~~~~HaV~iVGyg~-----------~yWivkN 175 (213)
T 3ioq_A 108 DGVGRVPRNNEQALIQRIAIQPVSIVVEAKGRAFQNYRGGIFAGPC-GTSIDHAVAAVGYGN-----------DYILIKN 175 (213)
T ss_dssp CEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSC-CSCCCEEEEEEEEET-----------TEEEEEC
T ss_pred ccEEEeCCchHHHHHHHHHhCCEEEEEEechhhhhhccCCeEcCCC-CCccCceEEEEecCC-----------CeEEEEC
Confidence 345567666677777788889999999997 789999999998854 445799999999974 5999999
Q ss_pred CCCCCCCCCcEEEEEeCC----CccCccccceecccee
Q psy1664 464 SFNTNWGENGLFRIVRGQ----NECGIEADITAGLPKI 497 (524)
Q Consensus 464 SWG~~WG~~Gy~~i~~g~----~~cgi~~~~~~~~p~~ 497 (524)
|||++||++|||||+||. |.|||++.+. +|.+
T Consensus 176 SWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~--~p~~ 211 (213)
T 3ioq_A 176 SWGTGWGEGGYIRIKRGSGNPQGACGVLSDSV--FPTK 211 (213)
T ss_dssp SBCTTSTBTTEEEEESSCSSTTCGGGTTSCCE--EEEC
T ss_pred CCCCCcccCCeEEEEcCCCCCCCcccccCcce--EeEe
Confidence 999999999999999997 8999999855 6765
No 71
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=99.93 E-value=1.9e-25 Score=213.15 Aligned_cols=97 Identities=33% Similarity=0.600 Sum_probs=83.2
Q ss_pred EEEEcC-CCHHHHHHHHHhCCCEEEEEeccc-ccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEc
Q psy1664 386 IAYSLP-ANEETIMREIFRHGPVEGSMTIYA-DMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVAN 463 (524)
Q Consensus 386 ~~~~~~-~~~~~~~~~~~~~gPv~~~~~~~~-~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~N 463 (524)
.+..++ .++++|+++|++ |||+++|+++. +|++|++|||..++.. .++|||+|||||+ +||||||
T Consensus 109 ~~~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~~~~~-~~~HaV~iVGyg~-----------~yWivkN 175 (212)
T 2cio_A 109 GVRQVQPYNEGALLYSIAN-QPVSVVLEAAGKDFQLYRGGIFVGPCGN-KVDHAVAAVGYGP-----------NYILIKN 175 (212)
T ss_dssp EEEECCSSCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECCCCCS-CCCEEEEEEEEET-----------TEEEEEC
T ss_pred eEEEeCCccHHHHHHHHHh-CCEEEEEeccCcchhhcCCceecCCCCC-CCCEEEEEEEecC-----------CeEEEEe
Confidence 344565 478899998876 99999999975 8999999999876554 5799999999986 5999999
Q ss_pred CCCCCCCCCcEEEEEeCC----CccCccccceecccee
Q psy1664 464 SFNTNWGENGLFRIVRGQ----NECGIEADITAGLPKI 497 (524)
Q Consensus 464 SWG~~WG~~Gy~~i~~g~----~~cgi~~~~~~~~p~~ 497 (524)
|||++||++|||||+|+. |.|||++.+. +|.+
T Consensus 176 SWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~--~p~~ 211 (212)
T 2cio_A 176 SWGTGWGENGYIRIKRGTGNSYGVCGLYTSSF--YPVK 211 (212)
T ss_dssp SBCTTSTBTTEEEEECSSSCTTCGGGTTSCCE--EEEC
T ss_pred CCCCCcccCcEEEEEcCCCCCCCccCccccee--EEEe
Confidence 999999999999999996 8999999854 5654
No 72
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=99.93 E-value=1.1e-25 Score=217.44 Aligned_cols=103 Identities=28% Similarity=0.603 Sum_probs=87.0
Q ss_pred EEEEcC-CCHHHHHHHHHhCCCEEEEEec-ccccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEc
Q psy1664 386 IAYSLP-ANEETIMREIFRHGPVEGSMTI-YADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVAN 463 (524)
Q Consensus 386 ~~~~~~-~~~~~~~~~~~~~gPv~~~~~~-~~~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~N 463 (524)
.+..++ .+++.|+++|++ |||+++|++ ..+|++|++|||..++.. .++|||+|||||++.. +++||||||
T Consensus 112 ~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~~c~~-~~~HaV~iVGyg~~~~------g~~yWivkN 183 (229)
T 1s4v_A 112 GHENVPENDENALLKAVAN-QPVSVAIDAGGSDFQFYSEGVFTGSCGT-ELDHGVAIVGYGTTID------GTKYWTVKN 183 (229)
T ss_dssp EEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECCCCCC-CCCEEEEEEEEEECTT------SCEEEEEEC
T ss_pred eEEEeCCccHHHHHHHHhc-CCEEEEEEeCcHHHhhCCCcEECCCCCC-CCCeEEEEEEeccccC------CCCEEEEEe
Confidence 344555 377888888876 999999999 578999999999876544 4799999999998752 789999999
Q ss_pred CCCCCCCCCcEEEEEeCC----CccCccccceeccceec
Q psy1664 464 SFNTNWGENGLFRIVRGQ----NECGIEADITAGLPKIG 498 (524)
Q Consensus 464 SWG~~WG~~Gy~~i~~g~----~~cgi~~~~~~~~p~~~ 498 (524)
|||++||++|||||+|+. |.|||++.+ .+|.+.
T Consensus 184 SWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~--~~p~~~ 220 (229)
T 1s4v_A 184 SWGPEWGEKGYIRMERGISDKEGLCGIAMEA--SYPIKK 220 (229)
T ss_dssp SBCTTSTBTTEEEEECSCSSTTCGGGTTSSC--EEEECC
T ss_pred CCCCCccCCcEEEEEcCCCCCCCcCcccccc--eeeEec
Confidence 999999999999999995 899999995 467654
No 73
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=99.92 E-value=6.6e-26 Score=218.47 Aligned_cols=101 Identities=22% Similarity=0.567 Sum_probs=86.3
Q ss_pred EEEcC-CCHHHHHHHHHhCCCEEEEEeccc-ccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEcC
Q psy1664 387 AYSLP-ANEETIMREIFRHGPVEGSMTIYA-DMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANS 464 (524)
Q Consensus 387 ~~~~~-~~~~~~~~~~~~~gPv~~~~~~~~-~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~NS 464 (524)
+..++ .++++|+++|+ +|||+++|++.. +|++|++|||.+. +...++|||+|||||++. ..+.+|||||||
T Consensus 118 ~~~~~~~~~~~l~~~l~-~gPV~v~i~~~~~~f~~y~~Giy~~~-~~~~~~Hav~iVGyg~~~-----~~g~~ywivkNS 190 (224)
T 3f75_A 118 FKDVPRRSEAAMKAALA-KSPVSIAIEADQMPFQFYHEGVFDAS-CGTDLDHGVLLVGYGTDK-----ESKKDFWIMKNS 190 (224)
T ss_dssp EEECCSSCHHHHHHHHH-HSCEEEEECCCSHHHHTEEEEEECCC-CCCCCCEEEEEEEEEEET-----TTTEEEEEEECS
T ss_pred EEEeCCChHHHHHHHHc-CCCEEEEEeccchhhhcCccceECCC-CCCccCeEEEEEEEeccc-----CCCCCEEEEECC
Confidence 34453 47889999998 999999999975 8999999999844 456689999999999872 018899999999
Q ss_pred CCCCCCCCcEEEEEeCC---CccCccccceeccce
Q psy1664 465 FNTNWGENGLFRIVRGQ---NECGIEADITAGLPK 496 (524)
Q Consensus 465 WG~~WG~~Gy~~i~~g~---~~cgi~~~~~~~~p~ 496 (524)
||++||++|||||+|+. |.|||++.++ +|.
T Consensus 191 WG~~WG~~Gy~~i~~~~~~~~~cgi~~~~~--~p~ 223 (224)
T 3f75_A 191 WGTGWGRDGYMYMAMHKGEEGQCGLLLDAS--FPV 223 (224)
T ss_dssp BCTTSTBTTEEEEESCSCTTCGGGTTSSCE--EEE
T ss_pred cCcchhhCCEEEEEcCCCCCCcCcccCcee--eee
Confidence 99999999999999998 9999999965 664
No 74
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=99.92 E-value=1.1e-25 Score=220.96 Aligned_cols=103 Identities=25% Similarity=0.564 Sum_probs=87.2
Q ss_pred EEEEcC-CCHHHHHHHHHhCCCEEEEEecc-cccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEc
Q psy1664 386 IAYSLP-ANEETIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVAN 463 (524)
Q Consensus 386 ~~~~~~-~~~~~~~~~~~~~gPv~~~~~~~-~~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~N 463 (524)
.+..++ .+++.|+++|++ |||+++|+++ ++|++|++|||..++.. .++|+|+|||||++.+ |++||||||
T Consensus 117 ~y~~v~~~~e~~ik~al~~-GPV~v~i~~~~~~f~~Y~sGVy~~~c~~-~~~HaV~IVGyg~~~~------G~~YWivkN 188 (262)
T 2fo5_A 117 GHQDVPANSEEDLARAVAN-QPVSVAVEASGKAFMFYSEGVFTGECGT-ELDHGVAVVGYGVAED------GKAYWTVKN 188 (262)
T ss_dssp EEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECCCCCC-CCCEEEEEEEEEECTT------SCEEEEEEC
T ss_pred eEEEcCCchHHHHHHHHHh-CCEEEEEecChHHHhccCCceECCCCCC-cCCEEEEEEEEcccCC------CceEEEEEe
Confidence 344565 478889988877 9999999997 68999999999876554 4799999999998742 789999999
Q ss_pred CCCCCCCCCcEEEEEeCCC----ccCccccceeccceec
Q psy1664 464 SFNTNWGENGLFRIVRGQN----ECGIEADITAGLPKIG 498 (524)
Q Consensus 464 SWG~~WG~~Gy~~i~~g~~----~cgi~~~~~~~~p~~~ 498 (524)
|||++||++|||||+|+.| .|||++.+. +|.+.
T Consensus 189 SWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~--~p~~~ 225 (262)
T 2fo5_A 189 SWGPSWGEQGYIRVEKDSGASGGLCGIAMEAS--YPVKT 225 (262)
T ss_dssp SBCTTSTBTTEEEEESSCSCTTCGGGTTTSCE--EEECC
T ss_pred CCCCCCCCCeEEEEEcCCCCCCCccceeeeee--EEEec
Confidence 9999999999999999974 499999854 67654
No 75
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=99.92 E-value=2.9e-25 Score=211.19 Aligned_cols=97 Identities=27% Similarity=0.548 Sum_probs=83.0
Q ss_pred EEEEcC-CCHHHHHHHHHhCCCEEEEEeccc-ccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEc
Q psy1664 386 IAYSLP-ANEETIMREIFRHGPVEGSMTIYA-DMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVAN 463 (524)
Q Consensus 386 ~~~~~~-~~~~~~~~~~~~~gPv~~~~~~~~-~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~N 463 (524)
.+..++ .++++||++|++ |||+++|+++. +|++|++|||..++.. .++|||+|||||+ +||||||
T Consensus 107 ~~~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~-~~~HaV~iVGyg~-----------~yWivkN 173 (208)
T 1o0e_A 107 GYNGVPFCNEXALKQAVAV-QPSTVAIDASSAQFQQYSSGIFSGPCGT-KLNHGVTIVGYQA-----------NYWIVRN 173 (208)
T ss_dssp EEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECCCCCS-CCCEEEEEEEECS-----------SEEEEEC
T ss_pred eEEEeCCCCHHHHHHHHHh-CCEEEEEEccCcccccccCceECCCCCC-cCCEEEEEEEeCC-----------CeEEEEc
Confidence 344555 478899998876 99999999975 8999999999876554 5799999999976 5999999
Q ss_pred CCCCCCCCCcEEEEEeCC--CccCccccceecccee
Q psy1664 464 SFNTNWGENGLFRIVRGQ--NECGIEADITAGLPKI 497 (524)
Q Consensus 464 SWG~~WG~~Gy~~i~~g~--~~cgi~~~~~~~~p~~ 497 (524)
|||++||++|||||+|+. |.|||++.++ +|.+
T Consensus 174 SWG~~WGe~Gy~~i~~~~~~~~Cgi~~~~~--~p~~ 207 (208)
T 1o0e_A 174 SWGRYWGEKGYIRMLRVGGCGLCGIARLPY--YPTK 207 (208)
T ss_dssp SBCTTSTBTTEEEEECCSTTCGGGTTSSCE--EEEC
T ss_pred CCCCcccCCcEEEEEcCCCCCcCCCcccce--eeec
Confidence 999999999999999997 8999999855 5553
No 76
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=99.92 E-value=1.2e-25 Score=218.73 Aligned_cols=103 Identities=26% Similarity=0.572 Sum_probs=85.3
Q ss_pred EEEEcCC-CHHHHHHHHHhCCCEEEEEecccccccccccEEeCCCCCCccCeeEEEeeecCCCC---CCCccCCccEEEE
Q psy1664 386 IAYSLPA-NEETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPL---GEGTSSVVKYWLV 461 (524)
Q Consensus 386 ~~~~~~~-~~~~~~~~~~~~gPv~~~~~~~~~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~---~~~~~~~~~ywiv 461 (524)
.+..++. ++++||++| |||+++|+++.+|++|++|||...+... ++|||+|||||++.. ......+.+||||
T Consensus 127 ~~~~v~~~~~~~ik~~l---GPV~v~i~~~~~f~~Y~~Giy~~~c~~~-~~HaV~iVGyg~~~~~~~~~~~~~g~~yWiv 202 (241)
T 2oul_A 127 NYLSVPDNKLKEALRFL---GPISISVAVSDDFAFYKEGIFDGECGDQ-LNHAVMLVGFGMKEIVNPLTKKGEKHYYYII 202 (241)
T ss_dssp EEEECCTTCHHHHHHHT---CCEEEEECBCHHHHTCCSSBCCSCBCSS-CCEEEEEEEEEEEEEECTTTCSEEEEEEEEE
T ss_pred eEEEeCCCCHHHHHHhh---CCEEEEEecCcchhhcCCcEEcCcCCCC-CCEEEEEEEeccccccccccccCCCCCEEEE
Confidence 3445654 789999999 9999999998899999999998755444 899999999998641 1112237789999
Q ss_pred EcCCCCCCCCCcEEEEEeCCCc----cCcccccee
Q psy1664 462 ANSFNTNWGENGLFRIVRGQNE----CGIEADITA 492 (524)
Q Consensus 462 ~NSWG~~WG~~Gy~~i~~g~~~----cgi~~~~~~ 492 (524)
|||||++||++|||||+|+.|. |||++.+++
T Consensus 203 kNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~ 237 (241)
T 2oul_A 203 KNSWGQQWGERGFINIETDESGLMRKCGLGTDAFI 237 (241)
T ss_dssp ECSBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEE
T ss_pred EeCCCCCcccCCEEEEEcCCCCCCCcCCccceEEE
Confidence 9999999999999999999877 999999663
No 77
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=99.92 E-value=1.7e-25 Score=218.03 Aligned_cols=103 Identities=25% Similarity=0.600 Sum_probs=85.4
Q ss_pred EEEEcCC-CHHHHHHHHHhCCCEEEEEecccccccccccEEeCCCCCCccCeeEEEeeecCCCC---CCCccCCccEEEE
Q psy1664 386 IAYSLPA-NEETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPL---GEGTSSVVKYWLV 461 (524)
Q Consensus 386 ~~~~~~~-~~~~~~~~~~~~gPv~~~~~~~~~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~---~~~~~~~~~ywiv 461 (524)
.++.++. ++++||++| |||+++|+++.+|++|++|||...+... ++|||+|||||++.. ......+.+||||
T Consensus 129 ~~~~v~~~~~~~ik~~l---GPV~v~i~~~~~f~~Y~~Giy~~~c~~~-~~HaV~iVGyg~~~~~~~~~~~~~g~~yWiv 204 (243)
T 3bwk_A 129 SYVSIPDDKFKEALRYL---GPISISIAASDDFAFYRGGFYDGECGAA-PNHAVILVGYGMKDIYNEDTGRMEKFYYYII 204 (243)
T ss_dssp EEEECCTTCHHHHHHHT---CCEEEEECCCHHHHTCCSSSCCCCCCSS-CCEEEEEEEEEEEEEECTTTCSEEEEEEEEE
T ss_pred eEEEeCCCCHHHHHHhh---CCEEEEEecChhHHhcCCceecCCCCCc-CCeEEEEEEecCccccccccccCCCCCEEEE
Confidence 4445654 789999999 9999999998889999999998755444 899999999998631 1112237789999
Q ss_pred EcCCCCCCCCCcEEEEEeCCCc----cCcccccee
Q psy1664 462 ANSFNTNWGENGLFRIVRGQNE----CGIEADITA 492 (524)
Q Consensus 462 ~NSWG~~WG~~Gy~~i~~g~~~----cgi~~~~~~ 492 (524)
|||||++||++|||||+|+.|. |||++.+++
T Consensus 205 kNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~ 239 (243)
T 3bwk_A 205 KNSWGSDWGEGGYINLETDENGYKKTCSIGTEAYV 239 (243)
T ss_dssp ECSBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEE
T ss_pred EeCCCCCcCCCcEEEEEcCCCCCCCcCCccceEEE
Confidence 9999999999999999999877 999999663
No 78
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=99.92 E-value=3.6e-25 Score=211.50 Aligned_cols=97 Identities=32% Similarity=0.626 Sum_probs=83.7
Q ss_pred EEEcC-CCHHHHHHHHHhCCCEEEEEecc-cccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEcC
Q psy1664 387 AYSLP-ANEETIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANS 464 (524)
Q Consensus 387 ~~~~~-~~~~~~~~~~~~~gPv~~~~~~~-~~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~NS 464 (524)
+..++ .++++||++|++ |||+++|+++ ++|++|++|||..++.. .++|||+|||||+ +|||||||
T Consensus 110 y~~v~~~~~~~i~~~l~~-gPV~v~i~~~~~~f~~Y~~Giy~~~~~~-~~~HaV~iVGyg~-----------~yWivkNS 176 (214)
T 2bdz_A 110 YKYVPANDEISLIQAIAN-QPVSVVTDSRGRGFQFYKGGIYEGPCGT-NTDHAVTAVGYGK-----------TYLLLKNS 176 (214)
T ss_dssp EEEECSSBHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECCSCCS-CCCEEEEEEEECS-----------SEEEEECS
T ss_pred EEEeCCCcHHHHHHHHHh-CCEEEEEeeChhHhhcccCceecCCCCC-CCCeEEEEEEcCC-----------CeEEEEeC
Confidence 33454 478999999987 9999999997 68999999999886554 5899999999976 59999999
Q ss_pred CCCCCCCCcEEEEEeCC----CccCccccceeccceec
Q psy1664 465 FNTNWGENGLFRIVRGQ----NECGIEADITAGLPKIG 498 (524)
Q Consensus 465 WG~~WG~~Gy~~i~~g~----~~cgi~~~~~~~~p~~~ 498 (524)
||++||++|||||+|+. |.|||++.+. +|.+.
T Consensus 177 WG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~--~p~~~ 212 (214)
T 2bdz_A 177 WGPNWGEKGYIRIKRASGRSKGTCGVYTSSF--FPIKG 212 (214)
T ss_dssp BCTTSTBTTEEEEECCCSBSSCGGGTTSCEE--EEECC
T ss_pred CCCCcccCCEEEEEcCCCCCCCcccccccce--EEEec
Confidence 99999999999999986 8999999954 67653
No 79
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=99.91 E-value=1.6e-24 Score=220.97 Aligned_cols=94 Identities=32% Similarity=0.597 Sum_probs=76.7
Q ss_pred EcCCCHHHHHHHHHhCCCEEEEEec-ccccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEcCCCC
Q psy1664 389 SLPANEETIMREIFRHGPVEGSMTI-YADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNT 467 (524)
Q Consensus 389 ~~~~~~~~~~~~~~~~gPv~~~~~~-~~~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~NSWG~ 467 (524)
.++...+.++.+++.+|||+|+|++ ..+|++|++|||..+++. .++|||+|||||+ +|||||||||+
T Consensus 263 ~~~~~~e~~l~~~v~~gPvsvai~a~~~~F~~Y~sGVy~~~~~~-~lnHaV~iVGyG~-----------~YWIVKNSWGt 330 (363)
T 3tnx_A 263 QVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGN-KVDHAVAAVGYGP-----------NYILIRNSWGT 330 (363)
T ss_dssp EECSSCHHHHHHHHTTSCEEEEECCCSHHHHTEEEEEECCCCCS-CCCEEEEEEEEET-----------TEEEEECSBCT
T ss_pred EcchhhHHHHHHHHHcCCcEEEEEecchhhhCCCCCEECCCCCC-CCCeEEEEEEcCC-----------CcEEEEeCCCC
Confidence 3443334444555567999999986 568999999999887655 4799999999964 49999999999
Q ss_pred CCCCCcEEEEEeCCC----ccCccccceeccce
Q psy1664 468 NWGENGLFRIVRGQN----ECGIEADITAGLPK 496 (524)
Q Consensus 468 ~WG~~Gy~~i~~g~~----~cgi~~~~~~~~p~ 496 (524)
+||++|||||+||.| .|||++.++ +|+
T Consensus 331 ~WGe~GY~rI~Rg~~~~~~~CGI~~~a~--yPi 361 (363)
T 3tnx_A 331 GWGENGYIRIKRGTGNSYGVCGLYTSSF--YPV 361 (363)
T ss_dssp TSTBTTEEEEECCSCCSSCGGGTTSCEE--EEE
T ss_pred ccccCcEEEEEcCCCCCCCcCCccceee--ecc
Confidence 999999999999974 499999955 665
No 80
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=99.91 E-value=6.2e-25 Score=217.77 Aligned_cols=84 Identities=31% Similarity=0.697 Sum_probs=78.0
Q ss_pred CCHHHHHHHHHHcCCeEEEEEecccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccc
Q psy1664 250 ANEETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGE 329 (524)
Q Consensus 250 ~~~~~ik~~l~~~GPV~v~i~v~~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe 329 (524)
.++++||++|+++|||+|+|+++++|++|++|||..+.+...++|||+|||||++ ++++|||||||||++|||
T Consensus 171 ~~~~~i~~~i~~~GPV~v~i~~~~~f~~Y~~GIy~~~~~~~~~~HaV~iVGyg~~-------~g~~YWivkNSWG~~WGe 243 (277)
T 1deu_A 171 SGREKMMAEIYANGPISCGIMATERLANYTGGIYAEYQDTTYINHVVSVAGWGIS-------DGTEYWIVRNSWGEPWGE 243 (277)
T ss_dssp CSHHHHHHHHHHHCCEEEEECCCHHHHTCCSSEECBCCSCCCCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTB
T ss_pred CCHHHHHHHHHHcCCEEEEEecccccccCcCcEECCCCCCCcCCeEEEEEEeccc-------CCccEEEEEeCCCCccCC
Confidence 3688999999999999999999999999999999988777779999999999986 478999999999999999
Q ss_pred cCccccccccC
Q psy1664 330 NGLFRIGCRPY 340 (524)
Q Consensus 330 ~Gy~ri~~~~~ 340 (524)
+|||||+++.+
T Consensus 244 ~GY~~i~rg~n 254 (277)
T 1deu_A 244 RGWLRIVTSTY 254 (277)
T ss_dssp TTEEEEECTTH
T ss_pred CcEEEEEcCCC
Confidence 99999999865
No 81
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=99.90 E-value=2.6e-24 Score=212.60 Aligned_cols=102 Identities=25% Similarity=0.556 Sum_probs=81.4
Q ss_pred HHHHHHHHHhCCCEEEEEeccccccccc-ccEE-eCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEcCCCCCCCC
Q psy1664 394 EETIMREIFRHGPVEGSMTIYADMILYK-TGIY-KHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGE 471 (524)
Q Consensus 394 ~~~~~~~~~~~gPv~~~~~~~~~f~~y~-~gi~-~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~NSWG~~WG~ 471 (524)
+++||++|+++|||+++|++. +|+.|+ +|++ ...+....++|||+|||||++...+| .+++|||||||||++||+
T Consensus 157 ~~~ik~~i~~~GPV~v~i~~~-~f~~y~~~g~~~~~~c~~~~~~HaV~iVGyG~~~~~~g--~~~~YWivkNSWG~~WGe 233 (265)
T 2wbf_X 157 VKIIKTEVMNKGSVIAYIKAE-NVMGYEFSGKKVKNLCGDDTADHAVNIVGYGNYVNSEG--EKKSYWIVRNSWGPYWGD 233 (265)
T ss_dssp HHHHHHHHHHHSCEEEEECGG-GGCSGGGGSSSEECCCCCSCCCEEEEEEEEEEEECTTS--CEEEEEEEECSBCTTSTB
T ss_pred HHHHHHHHHhcCCEEEEEEcc-cccccccCCcEEcCCCCCCcCCEEEEEEEEeCCcccCC--CcCCEEEEEcCCCCccCC
Confidence 478999999999999999985 587775 4533 23445456899999999998511001 136899999999999999
Q ss_pred CcEEEEEe-CCCccCccccceeccceec
Q psy1664 472 NGLFRIVR-GQNECGIEADITAGLPKIG 498 (524)
Q Consensus 472 ~Gy~~i~~-g~~~cgi~~~~~~~~p~~~ 498 (524)
+|||||+| |.|.|||+..+.+++|.+.
T Consensus 234 ~GY~ri~~~g~n~Cgi~~~~~~~~~~~~ 261 (265)
T 2wbf_X 234 EGYFKVDMYGPTHCHFNFIHSVVIFNVD 261 (265)
T ss_dssp TTEEEEESSCCTTCSSCSCCEEEEECEE
T ss_pred CCEEEEEecCCCccCcceeEEEEecccc
Confidence 99999986 6799999999988888754
No 82
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=99.89 E-value=9.6e-24 Score=220.69 Aligned_cols=94 Identities=37% Similarity=0.745 Sum_probs=81.1
Q ss_pred CCHHHHHHHHHHcCCeEEEEEecccccccCCceEEcCCCC------CCCCcEEEEEEeccCCCCCCCccceeEEEEeCCC
Q psy1664 250 ANEETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGG------PLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSF 323 (524)
Q Consensus 250 ~~~~~ik~~l~~~GPV~v~i~v~~~f~~Y~sGIy~~~~~~------~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSW 323 (524)
.++++||++|+++|||+|+|+++++|++|++|||..+.+. ..++|||+|||||++. .+|++||||||||
T Consensus 331 ~~e~~ik~al~~~GPVsvai~a~~~F~~Y~sGVy~~~~~~~~~~~~~~~~HaV~iVGyG~~~-----~~G~~YWIVkNSW 405 (441)
T 3pdf_A 331 CNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDS-----ASGMDYWIVKNSW 405 (441)
T ss_dssp CCHHHHHHHHHHHCCEEEEECCCGGGGGCCSSEECCC---CCCCCCCCCCEEEEEEEEEECT-----TTCCEEEEEECSB
T ss_pred CcHHHHHHHHHHCCCeEEEEEecccccccCCceEecCCCCcccCCCCcCCeEEEEEEecccC-----CCCceEEEEEcCC
Confidence 5789999999999999999999999999999999887653 2589999999999862 2578999999999
Q ss_pred CCcccccCccccccccCccCCcCcCCc
Q psy1664 324 NTNWGENGLFRIGCRPYEIPCERYMNG 350 (524)
Q Consensus 324 G~~WGe~Gy~ri~~~~~~~~c~~~~~~ 350 (524)
|++|||+|||||+|+.. .|++.+.+
T Consensus 406 G~~WGe~GYfri~rg~n--~CGI~s~~ 430 (441)
T 3pdf_A 406 GTGWGENGYFRIRRGTD--ECAIESIA 430 (441)
T ss_dssp CTTSTBTTEEEEECSSC--GGGTTSCC
T ss_pred CCCcCCCeEEEEEcCCC--ccCCCCce
Confidence 99999999999999864 68887644
No 83
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=99.84 E-value=9.1e-22 Score=196.67 Aligned_cols=88 Identities=15% Similarity=0.212 Sum_probs=77.7
Q ss_pred eeEEEEcCCCHHHHHHHHHhCCCEEEEEecccccccccc--cEEeCCCCCC--ccCeeEEEeeecCCCCCCCccCCccEE
Q psy1664 384 GRIAYSLPANEETIMREIFRHGPVEGSMTIYADMILYKT--GIYKHVAGGP--LGEHAIRIIGWGQEPLGEGTSSVVKYW 459 (524)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~gPv~~~~~~~~~f~~y~~--gi~~~~~~~~--~~~H~v~ivG~g~~~~~~~~~~~~~yw 459 (524)
...++.++.++++|+++|+++|||+++|+++++|+.|++ |||..+++.. .++|||+|||||+ +++||
T Consensus 181 i~~y~~v~~~e~~i~~al~~~gPV~v~~~~~~~f~~y~~~~Gi~~~~~~~~~~~~~Hav~iVGy~~---------~~~yw 251 (291)
T 3ois_A 181 ITEYSRVAQDIDHLKACLAVGSPFVFGFSVYNSWVGNNSLPVRIPLPTKNDTLEGGHAVLCVGYDD---------EIRHF 251 (291)
T ss_dssp CCEEEECCSCHHHHHHHHHTTCCEEEEEEEEHHHHGGGCCCSBCCCCCTTSCEEEEEEEEEEEEET---------TTTEE
T ss_pred eccEEEcCcCHHHHHHHHHcCCCEEEEEEeccchhhcCCCCeEEeCCCCCCCCcCCeEEEEEEEeC---------CCCEE
Confidence 445667878999999999999999999999989999998 9998775432 3699999999973 56899
Q ss_pred EEEcCCCCCCCCCcEEEEEeC
Q psy1664 460 LVANSFNTNWGENGLFRIVRG 480 (524)
Q Consensus 460 iv~NSWG~~WG~~Gy~~i~~g 480 (524)
|||||||++||++|||||+|+
T Consensus 252 ivkNSWG~~WG~~Gy~~i~~~ 272 (291)
T 3ois_A 252 RIRNSWGNNVGEDGYFWMPYE 272 (291)
T ss_dssp EEECSBCTTSTBTTEEEEEHH
T ss_pred EEEeCCCCCCCCCcEEEEEHH
Confidence 999999999999999999997
No 84
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=99.70 E-value=1.9e-17 Score=172.29 Aligned_cols=88 Identities=17% Similarity=0.199 Sum_probs=73.4
Q ss_pred EEEEcCCCH--HHHHHHHHhCCCEEEEEecccccccccccEEeCCC--------------------CCCccCeeEEEeee
Q psy1664 386 IAYSLPANE--ETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVA--------------------GGPLGEHAIRIIGW 443 (524)
Q Consensus 386 ~~~~~~~~~--~~~~~~~~~~gPv~~~~~~~~~f~~y~~gi~~~~~--------------------~~~~~~H~v~ivG~ 443 (524)
.+++++.++ ..++.+|.+.|||+++++|.. |++|++|||...+ +....+|||+||||
T Consensus 302 ~y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~~-~~~~~~GI~~~~~~~~~~fg~~~~m~KaeRl~~~~s~~~HAmlivGy 380 (457)
T 2e01_A 302 IYLNVDNETLSKLVVKRLQNNKAVFFGSHTPK-FMDKKTGVMDIELWNYPAIGYNLPQQKASRIRYHESLMTAAMLITGC 380 (457)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCCEEEEECTTT-TEETTTTEECTTSBCGGGGTCCCCCCHHHHHHTTSCCCCEEEEEEEE
T ss_pred eEEEcCHHHHHHHHHHHHHhCCCEEEEEEcCH-hHcccCceecccccchhhcCcccccCHHHhhccCCCCCCeEEEEEEE
Confidence 356777664 566788889999999999975 8889999997654 23457999999999
Q ss_pred cCCCCCCCccCCc--cEEEEEcCCCCCCCCCcEEEEEeC
Q psy1664 444 GQEPLGEGTSSVV--KYWLVANSFNTNWGENGLFRIVRG 480 (524)
Q Consensus 444 g~~~~~~~~~~~~--~ywiv~NSWG~~WG~~Gy~~i~~g 480 (524)
|.+.+ |+ +|||||||||+.||++|||+|+++
T Consensus 381 g~d~~------G~~p~yW~VkNSWG~~wG~~GY~~ms~~ 413 (457)
T 2e01_A 381 HVDET------SKLPLRYRVENSWGKDSGKDGLYVMTQK 413 (457)
T ss_dssp EECTT------TCCEEEEEEECSSCTTSTBTTEEEEEHH
T ss_pred EeccC------CCccCEEEEEeCccCCcCCCceEEeehh
Confidence 98632 76 899999999999999999999996
No 85
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=99.68 E-value=3.3e-17 Score=170.24 Aligned_cols=87 Identities=16% Similarity=0.140 Sum_probs=71.0
Q ss_pred EEEcCCCH--HHHHHHHHhCCCEEEEEecccccccccccEEeCCCC----------------------CCccCeeEEEee
Q psy1664 387 AYSLPANE--ETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAG----------------------GPLGEHAIRIIG 442 (524)
Q Consensus 387 ~~~~~~~~--~~~~~~~~~~gPv~~~~~~~~~f~~y~~gi~~~~~~----------------------~~~~~H~v~ivG 442 (524)
+++++.++ +.++.+|.+.|||+++++|.. +.++++|||...++ ....+|||+|||
T Consensus 299 y~Nvp~~~l~~~~~~al~~g~PV~~~~Dv~~-~~~~k~GI~~~~~~~~~~~fg~~~~~m~KaeRl~~~~s~~~HAmlivG 377 (453)
T 2cb5_A 299 YNNQPIDFLKKMVAASIKDGEAVWFGCDVGK-HFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLTFGESLMTHAMTFTA 377 (453)
T ss_dssp EEECCHHHHHHHHHHHHHTTCCEEEEECTTT-TEETTTTEECTTSBCHHHHHSCCSCSSCHHHHHHTTSCCCCEEEEEEE
T ss_pred ccccCHHHHHHHHHHHHHcCCCEEEEEEeCh-hhccCCcEEcCccccchhhcCccccccCHHHHhhccCCCCCeEEEEEE
Confidence 45666554 456688899999999999975 55669999986553 235799999999
Q ss_pred ec--CCCCCCCccCCc-cEEEEEcCCCCCCCCCcEEEEEeC
Q psy1664 443 WG--QEPLGEGTSSVV-KYWLVANSFNTNWGENGLFRIVRG 480 (524)
Q Consensus 443 ~g--~~~~~~~~~~~~-~ywiv~NSWG~~WG~~Gy~~i~~g 480 (524)
|| .+.+ |. +|||||||||+.||++|||+|+|+
T Consensus 378 yg~~~d~~------G~~~yWiVkNSWG~~wG~~GY~~ms~~ 412 (453)
T 2cb5_A 378 VSEKDDQD------GAFTKWRVENSWGEDHGHKGYLCMTDE 412 (453)
T ss_dssp EEECTTSC------SCEEEEEEECSBCTTSTBTTEEEEEHH
T ss_pred eccccccC------CCccEEEEEcCcCCCcCcCceEEechh
Confidence 99 6531 66 899999999999999999999986
No 86
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=99.43 E-value=1e-13 Score=110.54 Aligned_cols=73 Identities=14% Similarity=0.082 Sum_probs=63.8
Q ss_pred CCCcHHHHHHHHHHHHccccccccccccccchhHHhhhhhhhhhcCC--CCccccccccccccchHHHHHHHhCCC
Q psy1664 1 MGKSTADAVATFLKDLDLSQSSRNHSNGVFCDLSKAFDRVDHSILLP--KLPFYGAEKNALSKLTLSELEMRMGVH 74 (524)
Q Consensus 1 ~~~st~~~f~~f~~~~~k~y~~~~~~~~r~~~f~~nl~~I~~~N~~~--~~~~~~~g~N~fsd~t~eE~~~~~~~~ 74 (524)
|..+..++|++|+.+|+|.|.+.+|...| .+|.+|++.|++||++. ...+|++|+|+|+|||.+||..++|..
T Consensus 2 ~~l~~~~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf~~~~g~~ 76 (80)
T 2l95_A 2 MSLVSDEEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEFAQRSGKK 76 (80)
T ss_dssp CCSSCHHHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHHHHHHTSC
T ss_pred ccchHHHHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHHHHHhCCC
Confidence 78888999999999999999988888889 99999999999999863 136899999999999999993355543
No 87
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.36 E-value=3.4e-13 Score=112.55 Aligned_cols=67 Identities=12% Similarity=0.099 Sum_probs=61.6
Q ss_pred cHHHHHHHHHHHHccccccccccccccchhHHhhhhhhhhhcCCCCccccccccccccchHHHHHHHhC
Q psy1664 4 STADAVATFLKDLDLSQSSRNHSNGVFCDLSKAFDRVDHSILLPKLPFYGAEKNALSKLTLSELEMRMG 72 (524)
Q Consensus 4 st~~~f~~f~~~~~k~y~~~~~~~~r~~~f~~nl~~I~~~N~~~~~~~~~~g~N~fsd~t~eE~~~~~~ 72 (524)
+....|++|+++|+|.|.+.+|...|+.+|.+|++.|++||++. .+|++|+|+|+|||.+||++++.
T Consensus 20 ~~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~~--~sy~lglN~FaDLT~eEF~~~~l 86 (106)
T 3f75_P 20 HFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQG--YSYSLKMNHFGDLSRDEFRRKYL 86 (106)
T ss_dssp HHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHTSC--CSEEECCCTTTTCCHHHHHHHSC
T ss_pred HHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhcC--CCeeeCCcccccCCHHHHHHHHc
Confidence 35678999999999999998999999999999999999999884 79999999999999999998654
No 88
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=99.28 E-value=4.2e-12 Score=129.30 Aligned_cols=87 Identities=21% Similarity=0.310 Sum_probs=63.1
Q ss_pred EEEcCCCH--HHHHHHHHhCCCEEEEEecccccccccccEEeCCC-----------------------------------
Q psy1664 387 AYSLPANE--ETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVA----------------------------------- 429 (524)
Q Consensus 387 ~~~~~~~~--~~~~~~~~~~gPv~~~~~~~~~f~~y~~gi~~~~~----------------------------------- 429 (524)
+++++-++ ..+..+|...-||..+-+|.+.+.. +.||...+.
T Consensus 222 ~~Nvp~d~l~~~~~~~Lk~G~~V~fg~DV~~~~f~-~~Gi~~~~~~~~~~~~~g~~~~~~~~~~kaer~~~~~~~~e~~~ 300 (383)
T 3pw3_A 222 SYNLPLDEFMEVFDNAINTGYTIAWGSDVSESGFT-RDGVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWC 300 (383)
T ss_dssp EEECCHHHHHHHHHHHHHTTCCEEEEEECCSTTBC-TTSEECCBCHHHHHHHSSCCHHHHHTSCHHHHCTTTSCCCBCCC
T ss_pred cCCcCHHHHHHHHHHHHHcCCcEEEEcccCccccC-CCceeeCcchhhHHHhcCcchhhhccCCHHHhhhccCCCcccCC
Confidence 56776543 3333444444599999999764433 888873221
Q ss_pred -----------CCCccCeeEEEeeecCCCCCCCccCCccEEEEEcCCCCCCCCCcEEEEEeC
Q psy1664 430 -----------GGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLFRIVRG 480 (524)
Q Consensus 430 -----------~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~NSWG~~WG~~Gy~~i~~g 480 (524)
.....+|||+|||||.+.+ |++|||||||||+.||++|||+|++.
T Consensus 301 tk~~R~~~~d~~~t~~~Ha~~ivG~~~d~~------g~~yw~vkNSWg~~~g~~Gy~~m~~~ 356 (383)
T 3pw3_A 301 TQAERQLAYDNYETTDDHGMQIYGIAKDQE------GNEYYMVKNSWGTNSKYNGIWYASKA 356 (383)
T ss_dssp CHHHHHHHHHTTSSCCEEEEEEEEEEECTT------CCEEEEEECSBCSCSTTTTEEEEEHH
T ss_pred CHHHHHHHhhhccCcCCeEEEEEEEEEcCC------CceEEEEEeCCCCCCCcCCeEEecHH
Confidence 0123589999999997542 77999999999999999999999874
No 89
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=97.08 E-value=0.0059 Score=54.30 Aligned_cols=127 Identities=13% Similarity=0.069 Sum_probs=87.7
Q ss_pred CCCCCccHHHHHHHHHHHHHHH--------HHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHHHHHHHHhCCccCCcc
Q psy1664 118 DQGSCGSGWALGAVEAMSDRVC--------IASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKAWKYWVTTGIVSGGTY 189 (524)
Q Consensus 118 dQg~CGsCwAfA~~~~le~~~~--------i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a~~~~~~~Gi~~e~~y 189 (524)
.||.-+=|-+|+.++.|-.... |... ..+.+|+|+|.++ |..+...++|++..|...
T Consensus 26 TQg~~~WCa~Y~~aAilN~~~nt~~~nA~~iMr~--~yPN~s~~~l~~t---------~~~~~q~Iky~~s~G~~~---- 90 (183)
T 1pxv_A 26 QQFDNSWAAGFSMAALLNATKNTDTYNAHDIMRT--LYPEVSEQDLPNC---------ATFPNQMIEYGKSQGRDI---- 90 (183)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHTCSCCCHHHHHHH--HSTTSCTTTGGGC---------CBCHHHHHHHHHHTTCCC----
T ss_pred ccCcCchHHHHHHHHHHHhhhccCcCCHHHHHHH--HCCCCChhHHhhc---------CCCHHHHHHHHHHcCcCh----
Confidence 4888899999999988875541 1110 2477888888774 456899999998878542
Q ss_pred CCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecCCCHHHHHHHHHHcCCeEEEE
Q psy1664 190 ASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPANEETIMREIFRHGPVEGSM 269 (524)
Q Consensus 190 ~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~GPV~v~i 269 (524)
-|. .-..+-+++++.|-++.||.+..
T Consensus 91 -------~~~-----------------------------------------------nr~ls~neV~~~i~~Nk~I~v~~ 116 (183)
T 1pxv_A 91 -------HYQ-----------------------------------------------EGVPSYNQVDQLTKDNVGIMILA 116 (183)
T ss_dssp -------EEE-----------------------------------------------ESCCCHHHHHHHHHTTCCEEEEE
T ss_pred -------hHh-----------------------------------------------cCCCCHHHHHHHHhcCCcEEEEc
Confidence 111 11235688999999999998776
Q ss_pred EecccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCccccc
Q psy1664 270 TIYADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGLFRIG 336 (524)
Q Consensus 270 ~v~~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy~ri~ 336 (524)
.-. +. .......+||++||||-.- ++.++.+|=|=|-. |++-++
T Consensus 117 ~~v----------~e-~~~~~~~gHA~av~Gya~~-------~~~~~y~~WNPW~~-----~~~~~~ 160 (183)
T 1pxv_A 117 QSV----------SQ-NPNDPHLGHALAVVGNAKI-------NDQEKLIYWNPWDT-----ELSIQD 160 (183)
T ss_dssp ECC----------CS-STTSCCCEEEEEEEEEEEE-------TTEEEEEEECTTCS-----SCEEEE
T ss_pred ccc----------cc-CCCCccCceeEEEEeeeec-------CCCeEEEEeCCccC-----CcEeec
Confidence 631 11 1122356899999999976 35789999888753 555554
No 90
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=96.73 E-value=0.03 Score=49.70 Aligned_cols=120 Identities=11% Similarity=0.028 Sum_probs=83.5
Q ss_pred CCCCCccHHHHHHHHHHHHHHH--------HHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHHHHHHHHhCCccCCcc
Q psy1664 118 DQGSCGSGWALGAVEAMSDRVC--------IASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKAWKYWVTTGIVSGGTY 189 (524)
Q Consensus 118 dQg~CGsCwAfA~~~~le~~~~--------i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a~~~~~~~Gi~~e~~y 189 (524)
.||.=+=|-+|+.++.|-.... |... ..+.+|+++|..+ |..+...++|++..|...
T Consensus 17 TQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~--~yPn~S~~~l~~~---------~~t~~e~iky~~s~g~~~---- 81 (174)
T 1cv8_A 17 TQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRF--LHPNLQGQQFQFT---------GLTPREMIYFGQTQGRSP---- 81 (174)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHH--HCSSCCHHHHHHC---------CCCHHHHHHHHHHTTCCC----
T ss_pred ccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHH--HCCCCCHHHHhhc---------CCCHHHHHHHHHHcCCCh----
Confidence 4888899999999988875541 1111 2478999999954 346889999998887521
Q ss_pred CCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecCCCHHHHHHHHHHcCCeEEEE
Q psy1664 190 ASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPANEETIMREIFRHGPVEGSM 269 (524)
Q Consensus 190 ~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~GPV~v~i 269 (524)
-+. .-..+-+++++++.++.|+.+..
T Consensus 82 -------~~~-----------------------------------------------n~~ls~~eV~~~~~~nk~i~i~~ 107 (174)
T 1cv8_A 82 -------QLL-----------------------------------------------NRMTTYNEVDNLTKNNKGIAILG 107 (174)
T ss_dssp -------EEE-----------------------------------------------SSCCCHHHHHHHHHTTCCEEEEE
T ss_pred -------hhh-----------------------------------------------cCCCCHHHHHHHHhcCCceEEEc
Confidence 111 01124678999999999998777
Q ss_pred EecccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCC
Q psy1664 270 TIYADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFN 324 (524)
Q Consensus 270 ~v~~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG 324 (524)
+-.+ .......+||++||||-.-. ++.+|.++=|=|-
T Consensus 108 ~~ve------------~~~~~~~gHAlav~Gy~~~~------ng~~~y~~WNPW~ 144 (174)
T 1cv8_A 108 SRVE------------SRNGMHAGHAMAVVGNAKLN------NGQEVIIIWNPWD 144 (174)
T ss_dssp EESS------------CBTTBCCEEEEEEEEEEEET------TSCEEEEEECTTC
T ss_pred cccc------------CCCCCCCceeEEEEeeeeec------CCceEEEEeCCcc
Confidence 6421 01123568999999999853 4578999988774
No 91
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=96.41 E-value=0.023 Score=55.84 Aligned_cols=120 Identities=13% Similarity=0.084 Sum_probs=83.1
Q ss_pred CCCCCCccHHHHHHHHHHHHHHH--------HHcCCCccccCCHHHHHhhcCCCCCCCCCCChHHHHHHHHHhCCccCCc
Q psy1664 117 RDQGSCGSGWALGAVEAMSDRVC--------IASRGKRHVRLSSDDLVSCCKDCGNGCQGGFHGKAWKYWVTTGIVSGGT 188 (524)
Q Consensus 117 kdQg~CGsCwAfA~~~~le~~~~--------i~~~~~~~~~LS~q~lvdC~~~~~~gC~GG~~~~a~~~~~~~Gi~~e~~ 188 (524)
..||.-+=|-+||.++.|-.... |... ..+.+|+++|.++ |..+...++|++..|...
T Consensus 201 ETQg~~pWCa~Ya~aailN~~~~t~~~nA~~iMr~--~yPN~S~~~l~~t---------s~~~~q~Iky~qsyG~~~--- 266 (367)
T 1x9y_A 201 EQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRT--LYPEVSEQDLPNC---------ATFPNQMIEYGKSQGRDI--- 266 (367)
T ss_dssp CCCSSSSCHHHHHHHHHHHHHTTCSCCCHHHHHHH--HCTTSCTTTGGGC---------CCCHHHHHHHHHHTTEEE---
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHH--HCCCCChhHHhhc---------CCCHHHHHHHHHHhCcch---
Confidence 34888899999999988765431 1110 2467788888774 457899999998778542
Q ss_pred cCCCCCccccccCcccccCCCCCCCCCCCCCCccccccccCCCccccccccccceeeeecCCCHHHHHHHHHHcCCeEEE
Q psy1664 189 YASKQGCRPYEIPCERYMNGSHSSCQDNEPNTPECIRKCQPGYDVSYEDDLNFGRIAYSLPANEETIMREIFRHGPVEGS 268 (524)
Q Consensus 189 y~~~e~c~PY~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~l~~~GPV~v~ 268 (524)
-+. .-..+-+++++.+-.+.||.|.
T Consensus 267 --------~~~-----------------------------------------------n~~ls~deVk~~id~Nk~I~v~ 291 (367)
T 1x9y_A 267 --------HYQ-----------------------------------------------EGVPSYNQVDQLTKDNVGIMIL 291 (367)
T ss_dssp --------EEE-----------------------------------------------ESCCCHHHHHHHHHTTCCEEEE
T ss_pred --------hhh-----------------------------------------------cCCCCHHHHHHHHhcCCcEEEE
Confidence 111 1123467889999999999988
Q ss_pred EEec-ccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCC
Q psy1664 269 MTIY-ADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFN 324 (524)
Q Consensus 269 i~v~-~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG 324 (524)
+.-. +. ......+||++||||... ++.+|.++-|=|-
T Consensus 292 ~~~v~~~------------~n~~~~gHAlavvGyA~~-------~~~~~y~~WNPW~ 329 (367)
T 1x9y_A 292 AQSVSQN------------PNDPHLGHALAVVGNAKI-------NDQEKLIYWNPWD 329 (367)
T ss_dssp EEETTSC------------SSSCCCSEEEEEEEEEEE-------TTEEEEEEECTTC
T ss_pred ccccccC------------CCCccCceeEEEEecccc-------CCCcEEEEecCcc
Confidence 8853 21 112356999999999654 3578999988774
No 92
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=76.20 E-value=6.3 Score=35.03 Aligned_cols=67 Identities=9% Similarity=-0.020 Sum_probs=48.0
Q ss_pred CCCHHHHHHHHHhCCCEEEEEecccccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEcCCCCCCC
Q psy1664 391 PANEETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWG 470 (524)
Q Consensus 391 ~~~~~~~~~~~~~~gPv~~~~~~~~~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~NSWG~~WG 470 (524)
..+.++++.++-++-||.+...- ++... ......||++||||-.-. +.+|.+|=|=|- .
T Consensus 96 ~ls~neV~~~i~~Nk~I~v~~~~----------v~e~~-~~~~~gHA~av~Gya~~~-------~~~~y~~WNPW~---~ 154 (183)
T 1pxv_A 96 VPSYNQVDQLTKDNVGIMILAQS----------VSQNP-NDPHLGHALAVVGNAKIN-------DQEKLIYWNPWD---T 154 (183)
T ss_dssp CCCHHHHHHHHHTTCCEEEEEEC----------CCSST-TSCCCEEEEEEEEEEEET-------TEEEEEEECTTC---S
T ss_pred CCCHHHHHHHHhcCCcEEEEccc----------cccCC-CCccCceeEEEEeeeecC-------CCeEEEEeCCcc---C
Confidence 45788999999999999877642 11122 223478999999998776 678999977663 2
Q ss_pred CCcEEEEEeC
Q psy1664 471 ENGLFRIVRG 480 (524)
Q Consensus 471 ~~Gy~~i~~g 480 (524)
|++-+..+
T Consensus 155 --~~~~~~a~ 162 (183)
T 1pxv_A 155 --ELSIQDAD 162 (183)
T ss_dssp --SCEEEETT
T ss_pred --CcEeecCC
Confidence 77766654
No 93
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=75.50 E-value=5.4 Score=37.51 Aligned_cols=50 Identities=20% Similarity=0.304 Sum_probs=33.3
Q ss_pred CCHHHHHHHHHHcCCeEEEEEec-c-----ccccc--CCceEEcCCCCCCCCcEEEEEEecc
Q psy1664 250 ANEETIMREIFRHGPVEGSMTIY-A-----DMILY--KTGIYKHVAGGPLGEHAIRIIGWGQ 303 (524)
Q Consensus 250 ~~~~~ik~~l~~~GPV~v~i~v~-~-----~f~~Y--~sGIy~~~~~~~~~~HaV~iVGyg~ 303 (524)
.+.++|+.+|.++.||.|.+.+. . .|+.+ .+|-... ...+|+|+|+||+.
T Consensus 130 ~sl~~L~~~I~~G~PVIv~~t~~~~p~~~~~~~~W~~~~G~~~~----~~~~H~VVl~GYd~ 187 (236)
T 3erv_A 130 KSIEELYKSVKAGQPVVIITNATFAPLDEDEFTTWETNNGDVSI----TYNEHCVVLIGYDQ 187 (236)
T ss_dssp SCHHHHHHHHHTTCCEEEEEETTSSCCCGGGCEEEEETTEEEEE----CTTEEEEEEEEECS
T ss_pred CCHHHHHHHHHCCCeEEEEEeCCcccccccccceeecCCCceee----ccCCeEEEEEEEeC
Confidence 47899999999999999977652 0 12111 1332211 13489999999985
No 94
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=73.02 E-value=9.2 Score=37.65 Aligned_cols=65 Identities=9% Similarity=-0.074 Sum_probs=45.8
Q ss_pred CCCHHHHHHHHHhCCCEEEEEecc-cccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEcCCCCCC
Q psy1664 391 PANEETIMREIFRHGPVEGSMTIY-ADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNW 469 (524)
Q Consensus 391 ~~~~~~~~~~~~~~gPv~~~~~~~-~~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~NSWG~~W 469 (524)
..+.++++.++-.+-||.+.+... +. . ......||++||||...+ +.+|.++-|=| |
T Consensus 272 ~ls~deVk~~id~Nk~I~v~~~~v~~~-----------~-n~~~~gHAlavvGyA~~~-------~~~~y~~WNPW---~ 329 (367)
T 1x9y_A 272 VPSYNQVDQLTKDNVGIMILAQSVSQN-----------P-NDPHLGHALAVVGNAKIN-------DQEKLIYWNPW---D 329 (367)
T ss_dssp CCCHHHHHHHHHTTCCEEEEEEETTSC-----------S-SSCCCSEEEEEEEEEEET-------TEEEEEEECTT---C
T ss_pred CCCHHHHHHHHhcCCcEEEEccccccC-----------C-CCccCceeEEEEeccccC-------CCcEEEEecCc---c
Confidence 457889999999999999888642 21 1 122468999999995544 67899996655 4
Q ss_pred CCCcEEEEEe
Q psy1664 470 GENGLFRIVR 479 (524)
Q Consensus 470 G~~Gy~~i~~ 479 (524)
. +++-+..
T Consensus 330 ~--~~~~~sa 337 (367)
T 1x9y_A 330 T--ELSIQDA 337 (367)
T ss_dssp S--SCEEEET
T ss_pred C--CceeecC
Confidence 3 3555554
No 95
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=69.67 E-value=11 Score=33.46 Aligned_cols=56 Identities=9% Similarity=0.006 Sum_probs=40.5
Q ss_pred CCHHHHHHHHHhCCCEEEEEecccccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEcCC
Q psy1664 392 ANEETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSF 465 (524)
Q Consensus 392 ~~~~~~~~~~~~~gPv~~~~~~~~~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~NSW 465 (524)
.+.+++++++.++-||.+..+--+ .++. ....||++||||-.-.+ +.+|.++=|=|
T Consensus 88 ls~~eV~~~~~~nk~i~i~~~~ve-----------~~~~-~~~gHAlav~Gy~~~~n------g~~~y~~WNPW 143 (174)
T 1cv8_A 88 TTYNEVDNLTKNNKGIAILGSRVE-----------SRNG-MHAGHAMAVVGNAKLNN------GQEVIIIWNPW 143 (174)
T ss_dssp CCHHHHHHHHHTTCCEEEEEEESS-----------CBTT-BCCEEEEEEEEEEEETT------SCEEEEEECTT
T ss_pred CCHHHHHHHHhcCCceEEEccccc-----------CCCC-CCCceeEEEEeeeeecC------CceEEEEeCCc
Confidence 467889999999999977665211 1111 24689999999987542 67899997766
No 96
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=53.78 E-value=22 Score=34.91 Aligned_cols=60 Identities=18% Similarity=0.292 Sum_probs=39.6
Q ss_pred HHHHHHHHHcCCeEEEEEecccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCc
Q psy1664 253 ETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGL 332 (524)
Q Consensus 253 ~~ik~~l~~~GPV~v~i~v~~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy 332 (524)
+.|+++|.++.||...-.- ... . ...++||.+|=||..+ .||=|==.||-. .+||
T Consensus 239 ~~i~~eL~~~rPV~~~G~~-~~~------~------~~~~GHafV~DGY~~~----------~~~H~NwGWgG~--~nGy 293 (321)
T 3bb7_A 239 DIVFSELTKGHPLIYGGVS-PGS------M------GQDAGHAFVIDGYNKA----------GLVSVNWGWNGD--VDGY 293 (321)
T ss_dssp HHHHHHHHTTCCEEEEEC--------------------CCCEEEEEEEECTT----------SCEEEECSSTTT--TCEE
T ss_pred HHHHHHHHhCCCEEEEEec-CCC------C------CCCCceEEEEccccCC----------CeEEEecCCCCC--CCce
Confidence 4689999999998653221 111 0 1256999999999864 477676566622 3899
Q ss_pred ccccc
Q psy1664 333 FRIGC 337 (524)
Q Consensus 333 ~ri~~ 337 (524)
|.+..
T Consensus 294 y~l~~ 298 (321)
T 3bb7_A 294 YKIDL 298 (321)
T ss_dssp ECCTT
T ss_pred EeccC
Confidence 99974
No 97
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=52.24 E-value=26 Score=35.18 Aligned_cols=55 Identities=24% Similarity=0.349 Sum_probs=39.4
Q ss_pred HHHHHHHHHcCCeEEEEEecccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCcccccCc
Q psy1664 253 ETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGL 332 (524)
Q Consensus 253 ~~ik~~l~~~GPV~v~i~v~~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WGe~Gy 332 (524)
+.|+++|.++.||...-.- ..++||.+|=||..+ .||=|==.||-. .+||
T Consensus 290 ~~i~~eL~~~rPV~~~G~~------------------~~gGHAfV~DGy~~~----------~~~H~NwGWgG~--~nGy 339 (371)
T 1dki_A 290 AQIDKELSQNQPVYYQGVG------------------KVGGHAFVIDGADGR----------NFYHVNWGWGGV--SDGF 339 (371)
T ss_dssp HHHHHHHHTTCCEEEEEEE------------------TTEEEEEEEEEECSS----------SEEEEECSSTTT--TCEE
T ss_pred HHHHHHHHcCCCEEEEeec------------------CCCceEEEECcccCC----------CeEEEEeCcCCC--CCcc
Confidence 5688999999999643321 126999999999853 466666555532 5999
Q ss_pred ccccc
Q psy1664 333 FRIGC 337 (524)
Q Consensus 333 ~ri~~ 337 (524)
|.+..
T Consensus 340 y~l~~ 344 (371)
T 1dki_A 340 FRLDA 344 (371)
T ss_dssp EESCC
T ss_pred eeccC
Confidence 99974
No 98
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=51.40 E-value=26 Score=33.28 Aligned_cols=55 Identities=25% Similarity=0.396 Sum_probs=40.4
Q ss_pred HHHHHHHHHcCCeEEEEEecccccccCCceEEcCCCCCCCCcEEEEEEeccCCCCCCCccceeEEEEeCCCCCccc-ccC
Q psy1664 253 ETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWG-ENG 331 (524)
Q Consensus 253 ~~ik~~l~~~GPV~v~i~v~~~f~~Y~sGIy~~~~~~~~~~HaV~iVGyg~~~~~~g~~~g~~YWivkNSWG~~WG-e~G 331 (524)
+.|+++|.+..||.+.-.- ..+.||.+|=||..+ .|+-|-=.|| | .+|
T Consensus 172 ~~I~~eL~~grPV~~~G~~------------------~~gGHAwViDGY~~~----------~~~H~NwGWg---G~~nG 220 (261)
T 4d8b_A 172 AQIDKELSQNQPVYYQGVG------------------KVGGHAFVIDGADGR----------NFYHVNWGWG---GVSDG 220 (261)
T ss_dssp HHHHHHHHTTCCEEEEEEE------------------TTEEEEEEEEEEESS----------SCEEEECSST---TTTCE
T ss_pred HHHHHHHHcCCCEEEEeec------------------CCCceEEEEcccccC----------CEEEEEcCCC---CCCCc
Confidence 6788999999999865431 246999999999853 4666654555 3 599
Q ss_pred ccccccc
Q psy1664 332 LFRIGCR 338 (524)
Q Consensus 332 y~ri~~~ 338 (524)
||.|..-
T Consensus 221 Yy~l~~l 227 (261)
T 4d8b_A 221 FFRLDAL 227 (261)
T ss_dssp EECTTCC
T ss_pred eeecccc
Confidence 9999753
No 99
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=47.58 E-value=54 Score=30.59 Aligned_cols=54 Identities=19% Similarity=0.289 Sum_probs=34.1
Q ss_pred EEcC-CCHHHHHHHHHhCCCEEEEEecc------ccccccc--ccEEeCCCCCCccCeeEEEeeecC
Q psy1664 388 YSLP-ANEETIMREIFRHGPVEGSMTIY------ADMILYK--TGIYKHVAGGPLGEHAIRIIGWGQ 445 (524)
Q Consensus 388 ~~~~-~~~~~~~~~~~~~gPv~~~~~~~------~~f~~y~--~gi~~~~~~~~~~~H~v~ivG~g~ 445 (524)
++++ .+.++|+.+|.+.-||.|...+. ..|..+. +|-... ....|+|+|+||+.
T Consensus 125 ~dltG~sl~~L~~~I~~G~PVIv~~t~~~~p~~~~~~~~W~~~~G~~~~----~~~~H~VVl~GYd~ 187 (236)
T 3erv_A 125 VDLTGKSIEELYKSVKAGQPVVIITNATFAPLDEDEFTTWETNNGDVSI----TYNEHCVVLIGYDQ 187 (236)
T ss_dssp EECTTSCHHHHHHHHHTTCCEEEEEETTSSCCCGGGCEEEEETTEEEEE----CTTEEEEEEEEECS
T ss_pred eecCCCCHHHHHHHHHCCCeEEEEEeCCcccccccccceeecCCCceee----ccCCeEEEEEEEeC
Confidence 4454 37899999998878999877542 0122221 232211 12579999999965
No 100
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=24.83 E-value=1.3e+02 Score=29.28 Aligned_cols=60 Identities=18% Similarity=0.278 Sum_probs=38.8
Q ss_pred HHHHHHHHhCCCEEEEEecccccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEcCCCCCCCCCcE
Q psy1664 395 ETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGL 474 (524)
Q Consensus 395 ~~~~~~~~~~gPv~~~~~~~~~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~NSWG~~WG~~Gy 474 (524)
+.|+.+|.+..||...-.- .. +. ...+.||.+|=||..+. |+-|-=.||.. .+||
T Consensus 239 ~~i~~eL~~~rPV~~~G~~-~~------~~------~~~~GHafV~DGY~~~~----------~~H~NwGWgG~--~nGy 293 (321)
T 3bb7_A 239 DIVFSELTKGHPLIYGGVS-PG------SM------GQDAGHAFVIDGYNKAG----------LVSVNWGWNGD--VDGY 293 (321)
T ss_dssp HHHHHHHHTTCCEEEEEC--------------------CCCEEEEEEEECTTS----------CEEEECSSTTT--TCEE
T ss_pred HHHHHHHHhCCCEEEEEec-CC------CC------CCCCceEEEEccccCCC----------eEEEecCCCCC--CCce
Confidence 4789999999998653211 11 10 02478999999997543 78775466632 3899
Q ss_pred EEEEe
Q psy1664 475 FRIVR 479 (524)
Q Consensus 475 ~~i~~ 479 (524)
|.+..
T Consensus 294 y~l~~ 298 (321)
T 3bb7_A 294 YKIDL 298 (321)
T ss_dssp ECCTT
T ss_pred EeccC
Confidence 98764
No 101
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=23.97 E-value=1.6e+02 Score=29.26 Aligned_cols=55 Identities=24% Similarity=0.352 Sum_probs=38.6
Q ss_pred HHHHHHHHhCCCEEEEEecccccccccccEEeCCCCCCccCeeEEEeeecCCCCCCCccCCccEEEEEcCCCCCCCCCcE
Q psy1664 395 ETIMREIFRHGPVEGSMTIYADMILYKTGIYKHVAGGPLGEHAIRIIGWGQEPLGEGTSSVVKYWLVANSFNTNWGENGL 474 (524)
Q Consensus 395 ~~~~~~~~~~gPv~~~~~~~~~f~~y~~gi~~~~~~~~~~~H~v~ivG~g~~~~~~~~~~~~~ywiv~NSWG~~WG~~Gy 474 (524)
+.|+.+|.+..||...-. .. .+.||.+|=||..+ .|+-|-=.||.. .+||
T Consensus 290 ~~i~~eL~~~rPV~~~G~-------------~~-----~gGHAfV~DGy~~~----------~~~H~NwGWgG~--~nGy 339 (371)
T 1dki_A 290 AQIDKELSQNQPVYYQGV-------------GK-----VGGHAFVIDGADGR----------NFYHVNWGWGGV--SDGF 339 (371)
T ss_dssp HHHHHHHHTTCCEEEEEE-------------ET-----TEEEEEEEEEECSS----------SEEEEECSSTTT--TCEE
T ss_pred HHHHHHHHcCCCEEEEee-------------cC-----CCceEEEECcccCC----------CeEEEEeCcCCC--CCcc
Confidence 568899999999954311 01 16899999999644 377774466642 5899
Q ss_pred EEEEe
Q psy1664 475 FRIVR 479 (524)
Q Consensus 475 ~~i~~ 479 (524)
|.+..
T Consensus 340 y~l~~ 344 (371)
T 1dki_A 340 FRLDA 344 (371)
T ss_dssp EESCC
T ss_pred eeccC
Confidence 99864
Done!