BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16660
(594 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q96MC6|HIAT1_HUMAN Hippocampus abundant transcript 1 protein OS=Homo sapiens GN=HIAT1
PE=2 SV=2
Length = 490
Score = 540 bits (1392), Expect = e-152, Method: Compositional matrix adjust.
Identities = 288/484 (59%), Positives = 349/484 (72%), Gaps = 68/484 (14%)
Query: 92 SGIGEPSVYHALVVIFLEFFAWGLLTMPIISVLNRTFPDHTFLMNGLIMGIKGFLSFLSA 151
GIG PSVYHA++VIFLEFFAWGLLT P + VL+ TFP HTFLMNGLI G+KG LSFLSA
Sbjct: 30 QGIGSPSVYHAVIVIFLEFFAWGLLTAPTLVVLHETFPKHTFLMNGLIQGVKGLLSFLSA 89
Query: 152 PLIGALSDLWGRKLFLLITVFVTCLPIPLMTLDTWWFFAMISISGVFAVTFSVVFAYVAD 211
PLIGALSD+WGRK FLL+TVF
Sbjct: 90 PLIGALSDVWGRKSFLLLTVF--------------------------------------- 110
Query: 212 VTEEHERSLAYGLKFIALKIILMTLDTWWFFAMISISGVFAVTFSVVFAYVADVTEEHER 271
F I LM + WW+FA+IS+SGVFAVTFSVVFAYVAD+T+EHER
Sbjct: 111 --------------FTCAPIPLMKISPWWYFAVISVSGVFAVTFSVVFAYVADITQEHER 156
Query: 272 SLAYGLSFSFSQVSATFAASMVFSPALGAYLEKTYSLSLVVAVATAVAILDVFFILVAVP 331
S+AYGL VSATFAAS+V SPA+GAYL + Y SLVV +ATA+A+LD+ FILVAVP
Sbjct: 157 SMAYGL------VSATFAASLVTSPAIGAYLGRVYGDSLVVVLATAIALLDICFILVAVP 210
Query: 332 ESLPEKVRQASWGGAPISWEQADPFASLRKVGKDQTILMLCVTVFLSYLPEAGQYSCLFV 391
ESLPEK+R ASWG APISWEQADPFASL+KVG+D +L++C+TVFLSYLPEAGQYS F+
Sbjct: 211 ESLPEKMRPASWG-APISWEQADPFASLKKVGQDSIVLLICITVFLSYLPEAGQYSSFFL 269
Query: 392 YLKLVMGFDEVHVAVFIAVIGTLSVSAQ-IILGCLMNVLGAKHTIIIGLVFEMLQLMWYG 450
YL+ +M F VA FIAV+G LS+ AQ I+L LM +G K+TI++GL F++LQL WYG
Sbjct: 270 YLRQIMKFSPESVAAFIAVLGILSIIAQTIVLSLLMRSIGNKNTILLGLGFQILQLAWYG 329
Query: 451 FGSQMWMMWAAGILASLASITYPAISALVSMHSDADRQGLVQGMVTGMRGLCNGLGPAMF 510
FGS+ WMMWAAG +A+++SIT+PA+SALVS +DAD+QG+VQGM+TG+RGLCNGLGPA++
Sbjct: 330 FGSEPWMMWAAGAVAAMSSITFPAVSALVSRTADADQQGVVQGMITGIRGLCNGLGPALY 389
Query: 511 GLIFYMFHVDLSD----GPDVGPGTLANRTNNVNSYPSVIPGPPFVFGALLVIAALLVAT 566
G IFY+FHV+L + G D+G T N S+IPGPPF+FGA V+ ALLVA
Sbjct: 390 GFIFYIFHVELKELPITGTDLGTNTSPQHHFEQN---SIIPGPPFLFGACSVLLALLVAL 446
Query: 567 FIPE 570
FIPE
Sbjct: 447 FIPE 450
>sp|P70187|HIAT1_MOUSE Hippocampus abundant transcript 1 protein OS=Mus musculus GN=Hiat1
PE=2 SV=3
Length = 490
Score = 540 bits (1392), Expect = e-152, Method: Compositional matrix adjust.
Identities = 288/484 (59%), Positives = 349/484 (72%), Gaps = 68/484 (14%)
Query: 92 SGIGEPSVYHALVVIFLEFFAWGLLTMPIISVLNRTFPDHTFLMNGLIMGIKGFLSFLSA 151
GIG PSVYHA++VIFLEFFAWGLLT P + VL+ TFP HTFLMNGLI G+KG LSFLSA
Sbjct: 30 QGIGSPSVYHAVIVIFLEFFAWGLLTAPTLVVLHETFPKHTFLMNGLIQGVKGLLSFLSA 89
Query: 152 PLIGALSDLWGRKLFLLITVFVTCLPIPLMTLDTWWFFAMISISGVFAVTFSVVFAYVAD 211
PLIGALSD+WGRK FLL+TVF
Sbjct: 90 PLIGALSDVWGRKSFLLLTVF--------------------------------------- 110
Query: 212 VTEEHERSLAYGLKFIALKIILMTLDTWWFFAMISISGVFAVTFSVVFAYVADVTEEHER 271
F I LM + WW+FA+IS+SGVFAVTFSVVFAYVAD+T+EHER
Sbjct: 111 --------------FTCAPIPLMKISPWWYFAVISVSGVFAVTFSVVFAYVADITQEHER 156
Query: 272 SLAYGLSFSFSQVSATFAASMVFSPALGAYLEKTYSLSLVVAVATAVAILDVFFILVAVP 331
S+AYGL VSATFAAS+V SPA+GAYL + Y SLVV +ATA+A+LD+ FILVAVP
Sbjct: 157 SMAYGL------VSATFAASLVTSPAIGAYLGRVYGDSLVVVLATAIALLDICFILVAVP 210
Query: 332 ESLPEKVRQASWGGAPISWEQADPFASLRKVGKDQTILMLCVTVFLSYLPEAGQYSCLFV 391
ESLPEK+R ASWG APISWEQADPFASL+KVG+D +L++C+TVFLSYLPEAGQYS F+
Sbjct: 211 ESLPEKMRPASWG-APISWEQADPFASLKKVGQDSIVLLICITVFLSYLPEAGQYSSFFL 269
Query: 392 YLKLVMGFDEVHVAVFIAVIGTLSVSAQ-IILGCLMNVLGAKHTIIIGLVFEMLQLMWYG 450
YL+ +M F VA FIAV+G LS+ AQ I+L LM +G K+TI++GL F++LQL WYG
Sbjct: 270 YLRQIMKFSPESVAAFIAVLGILSIIAQTIVLSLLMRSIGNKNTILLGLGFQILQLAWYG 329
Query: 451 FGSQMWMMWAAGILASLASITYPAISALVSMHSDADRQGLVQGMVTGMRGLCNGLGPAMF 510
FGS+ WMMWAAG +A+++SIT+PA+SALVS +DAD+QG+VQGM+TG+RGLCNGLGPA++
Sbjct: 330 FGSEPWMMWAAGAVAAMSSITFPAVSALVSRTADADQQGVVQGMITGIRGLCNGLGPALY 389
Query: 511 GLIFYMFHVDLSD----GPDVGPGTLANRTNNVNSYPSVIPGPPFVFGALLVIAALLVAT 566
G IFY+FHV+L + G D+G T N S+IPGPPF+FGA V+ ALLVA
Sbjct: 390 GFIFYIFHVELKELPITGTDLGTNTSPQHHFEQN---SIIPGPPFLFGACSVLLALLVAL 446
Query: 567 FIPE 570
FIPE
Sbjct: 447 FIPE 450
>sp|Q8CIA9|HIAL1_MOUSE Hippocampus abundant transcript-like protein 1 OS=Mus musculus
GN=Hiatl1 PE=2 SV=3
Length = 507
Score = 531 bits (1367), Expect = e-150, Method: Compositional matrix adjust.
Identities = 281/506 (55%), Positives = 348/506 (68%), Gaps = 78/506 (15%)
Query: 93 GIGEPSVYHALVVIFLEFFAWGLLTMPIISVLNRTFPDHTFLMNGLIMGIKGFLSFLSAP 152
G G PSVYHA VIFLEFFAWGLLT P+++VL+ TFP HTFLMNGLI G+KG LSFLSAP
Sbjct: 41 GFGHPSVYHAAFVIFLEFFAWGLLTTPMLTVLHETFPQHTFLMNGLIQGVKGLLSFLSAP 100
Query: 153 LIGALSDLWGRKLFLLITVFVTCLPIPLMTLDTWWFFAMISISGVFAVTFSVVFAYVADV 212
LIGALSD+WGRK FLL TVF
Sbjct: 101 LIGALSDVWGRKPFLLGTVF---------------------------------------- 120
Query: 213 TEEHERSLAYGLKFIALKIILMTLDTWWFFAMISISGVFAVTFSVVFAYVADVTEEHERS 272
F I LM ++ WW+F MIS+SGVF+VTFSV+FAYVAD T+EHERS
Sbjct: 121 -------------FTCFPIPLMRINPWWYFGMISVSGVFSVTFSVIFAYVADFTQEHERS 167
Query: 273 LAYGLSFSFSQVSATFAASMVFSPALGAYLEKTYSLSLVVAVATAVAILDVFFILVAVPE 332
AYG VSATFAAS+V SPA+G YL Y SLVV VAT VA+LD+ FIL+AVPE
Sbjct: 168 TAYGW------VSATFAASLVSSPAIGTYLSANYGDSLVVLVATLVALLDICFILIAVPE 221
Query: 333 SLPEKVRQASWGGAPISWEQADPFASLRKVGKDQTILMLCVTVFLSYLPEAGQYSCLFVY 392
SL EK+R ASWG A ISW+QADPFASL+KVGKD T+L++C+TVFLSYLPEAGQYS F+Y
Sbjct: 222 SLSEKIRPASWG-AQISWKQADPFASLKKVGKDSTVLLICITVFLSYLPEAGQYSSFFLY 280
Query: 393 LKLVMGFDEVHVAVFIAVIGTLSVSAQ-IILGCLMNVLGAKHTIIIGLVFEMLQLMWYGF 451
L+ V+GF V + FIA++G LS+ AQ + L LM LG K+T+++GL F+MLQL WYGF
Sbjct: 281 LRQVIGFGSVKIVAFIAMVGILSIVAQTVFLSKLMRSLGNKNTVLLGLGFQMLQLAWYGF 340
Query: 452 GSQMWMMWAAGILASLASITYPAISALVSMHSDADRQGLVQGMVTGMRGLCNGLGPAMFG 511
GSQ WMMWAAG +A+++SIT+PA+SAL+S ++++D+QG+ QG+VTG+RGLCNGLGPA++G
Sbjct: 341 GSQAWMMWAAGTVAAMSSITFPAVSALISRNAESDQQGVAQGIVTGIRGLCNGLGPALYG 400
Query: 512 LIFYMFHVDLSD-GPDVGPGTLANRTNNVNSYP---SVIPGPPFVFGALLVIAALLVATF 567
IFYMFHV+LS+ GP + N + P + IPGPPF+FGA +V+ + LVA F
Sbjct: 401 FIFYMFHVELSELGPKL----------NSDDDPLQGAFIPGPPFLFGACIVLMSFLVALF 450
Query: 568 IPESIVTRSVGTTQLRRQSSVGSVAV 593
IPE R Q S+ GS++
Sbjct: 451 IPE---YRKTSGVQKHNNSTSGSLST 473
>sp|Q5SR56|HIAL1_HUMAN Hippocampus abundant transcript-like protein 1 OS=Homo sapiens
GN=HIATL1 PE=2 SV=3
Length = 506
Score = 527 bits (1357), Expect = e-148, Method: Compositional matrix adjust.
Identities = 288/501 (57%), Positives = 355/501 (70%), Gaps = 72/501 (14%)
Query: 93 GIGEPSVYHALVVIFLEFFAWGLLTMPIISVLNRTFPDHTFLMNGLIMGIKGFLSFLSAP 152
G G PSVYHA +VIFLEFFAWGLLT P+++VL+ TF HTFLMNGLI G+KG LSFLSAP
Sbjct: 39 GFGRPSVYHAAIVIFLEFFAWGLLTTPMLTVLHETFSQHTFLMNGLIQGVKGLLSFLSAP 98
Query: 153 LIGALSDLWGRKLFLLITVFVTCLPIPLMTLDTWWFFAMISISGVFAVTFSVVFAYVADV 212
LIGALSD+WGRK FLL TVF
Sbjct: 99 LIGALSDVWGRKPFLLGTVF---------------------------------------- 118
Query: 213 TEEHERSLAYGLKFIALKIILMTLDTWWFFAMISISGVFAVTFSVVFAYVADVTEEHERS 272
F I LM + WW+FAMIS+SGVF+VTFSV+FAYVADVT+EHERS
Sbjct: 119 -------------FTCFPIPLMRISPWWYFAMISVSGVFSVTFSVIFAYVADVTQEHERS 165
Query: 273 LAYGLSFSFSQVSATFAASMVFSPALGAYLEKTYSLSLVVAVATAVAILDVFFILVAVPE 332
AYG VSATFAAS+V SPA+GAYL +Y SLVV VAT VA+LD+ FILVAVPE
Sbjct: 166 TAYGW------VSATFAASLVSSPAIGAYLSASYGDSLVVLVATVVALLDICFILVAVPE 219
Query: 333 SLPEKVRQASWGGAPISWEQADPFASLRKVGKDQTILMLCVTVFLSYLPEAGQYSCLFVY 392
SLPEK+R SWG A ISW+QADPFASL+KVGKD T+L++C+TVFLSYLPEAGQYS F+Y
Sbjct: 220 SLPEKMRPVSWG-AQISWKQADPFASLKKVGKDSTVLLICITVFLSYLPEAGQYSSFFLY 278
Query: 393 LKLVMGFDEVHVAVFIAVIGTLSVSAQI-ILGCLMNVLGAKHTIIIGLVFEMLQLMWYGF 451
L+ V+GF V +A FIA++G LS+ AQ L LM LG K+T+++GL F+MLQL WYGF
Sbjct: 279 LRQVIGFGSVKIAAFIAMVGILSIVAQTAFLSILMRSLGNKNTVLLGLGFQMLQLAWYGF 338
Query: 452 GSQMWMMWAAGILASLASITYPAISALVSMHSDADRQGLVQGMVTGMRGLCNGLGPAMFG 511
GSQ WMMWAAG +A+++SIT+PAISALVS ++++D+QG+ QG++TG+RGLCNGLGPA++G
Sbjct: 339 GSQAWMMWAAGTVAAMSSITFPAISALVSRNAESDQQGVAQGIITGIRGLCNGLGPALYG 398
Query: 512 LIFYMFHVDLSD-GPDVGPGTLANRTNNVNSYPSVIPGPPFVFGALLVIAALLVATFIPE 570
IFYMFHV+L++ GP + +NNV +VIPGPPF+FGA +V+ + LVA FIPE
Sbjct: 399 FIFYMFHVELTELGPKL-------NSNNVPLQGAVIPGPPFLFGACIVLMSFLVALFIPE 451
Query: 571 SIVTRSVGTTQLRRQSSVGSV 591
+++ G Q SS GS+
Sbjct: 452 --YSKASG-VQKHSNSSSGSL 469
>sp|A4IF94|HIAL1_BOVIN Hippocampus abundant transcript-like protein 1 OS=Bos taurus
GN=HIATL1 PE=2 SV=1
Length = 502
Score = 518 bits (1335), Expect = e-146, Method: Compositional matrix adjust.
Identities = 285/502 (56%), Positives = 351/502 (69%), Gaps = 73/502 (14%)
Query: 93 GIGEPSVYHALVVIFLEFFAWGLLTMPIISVLNRTFPDHTFLMNGLIMGIKGFLSFLSAP 152
G G PSVYHA +VIFLEFFAWGLLT +++VL+ TFP HTFLMNGLI G+KG LSFLSAP
Sbjct: 36 GFGRPSVYHAAIVIFLEFFAWGLLTTSMLTVLHETFPQHTFLMNGLIQGVKGLLSFLSAP 95
Query: 153 LIGALSDLWGRKLFLLITVFVTCLPIPLMTLDTWWFFAMISISGVFAVTFSVVFAYVADV 212
LIGALSD+WGRK FLL TVF
Sbjct: 96 LIGALSDVWGRKPFLLGTVF---------------------------------------- 115
Query: 213 TEEHERSLAYGLKFIALKIILMTLDTWWFFAMISISGVFAVTFSVVFAYVADVTEEHERS 272
F I LM + WW+FAMISISGVF+VTFSV+FAYVADVT+EHERS
Sbjct: 116 -------------FTCFPIPLMRISPWWYFAMISISGVFSVTFSVIFAYVADVTQEHERS 162
Query: 273 LAYGLSFSFSQVSATFAASMVFSPALGAYLEKTYSLSLVVAVATAVAILDVFFILVAVPE 332
AYG VSATFAAS+V SPA+GAYL +Y SLVV VAT VA+LD+ FIL+AVPE
Sbjct: 163 TAYGW------VSATFAASLVSSPAIGAYLSASYGDSLVVLVATVVALLDICFILLAVPE 216
Query: 333 SLPEKVRQASWGGAPISWEQADPFASLRKVGKDQTILMLCVTVFLSYLPEAGQYSCLFVY 392
SLPEK+R SWG A ISW+QADPFASL+KVGKD TIL++C+TVFLSYLPEAGQYS F+Y
Sbjct: 217 SLPEKMRPLSWG-ARISWKQADPFASLKKVGKDSTILLICITVFLSYLPEAGQYSSFFLY 275
Query: 393 LKLVMGFDEVHVAVFIAVIGTLSVSAQ-IILGCLMNVLGAKHTIIIGLVFEMLQLMWYGF 451
L+ V+GF + +A FIA++G LS+ AQ + L LM LG K+T+++GL F+M QL WYGF
Sbjct: 276 LRQVIGFGSIKIAAFIAMVGILSIVAQTVFLTSLMRSLGNKNTVLLGLGFQMFQLAWYGF 335
Query: 452 GSQMWMMWAAGILASLASITYPAISALVSMHSDADRQGLVQGMVTGMRGLCNGLGPAMFG 511
GSQ WMMWAAGI+A+++SIT+PA+S LVS ++D+++QG+ QG++TG+RGLCNGLGPA++G
Sbjct: 336 GSQAWMMWAAGIVAAVSSITFPAVSTLVSQNADSNQQGVAQGIITGIRGLCNGLGPALYG 395
Query: 512 LIFYMFHVDLSD-GPDVGPGTLANRTNNVNSYPSVIPGPPFVFGALLVIAALLVATFIPE 570
IFYMFHV+L++ P++ +NN +VIPGPPF+FGA +V + LVA FIPE
Sbjct: 396 FIFYMFHVELTELEPEL-------ISNNAALQGAVIPGPPFLFGACIVFMSFLVAVFIPE 448
Query: 571 SIVTRSVGTTQLRRQSSVGSVA 592
S G Q S GS+A
Sbjct: 449 ----YSKGGIQKHSNSISGSLA 466
>sp|B2RYH9|HIAL1_RAT Hippocampus abundant transcript-like protein 1 OS=Rattus norvegicus
GN=Hiatl1 PE=2 SV=1
Length = 507
Score = 514 bits (1323), Expect = e-144, Method: Compositional matrix adjust.
Identities = 277/503 (55%), Positives = 348/503 (69%), Gaps = 72/503 (14%)
Query: 93 GIGEPSVYHALVVIFLEFFAWGLLTMPIISVLNRTFPDHTFLMNGLIMGIKGFLSFLSAP 152
G G+PSVYHA VIF EFFAWGLLT P+++VL+ TFP HTFLMNGLI G+KG LSFLSAP
Sbjct: 41 GFGQPSVYHAAFVIFFEFFAWGLLTTPMLTVLHETFPQHTFLMNGLIQGVKGLLSFLSAP 100
Query: 153 LIGALSDLWGRKLFLLITVFVTCLPIPLMTLDTWWFFAMISISGVFAVTFSVVFAYVADV 212
LIGALSD+WGRK FLL TVF
Sbjct: 101 LIGALSDVWGRKPFLLGTVF---------------------------------------- 120
Query: 213 TEEHERSLAYGLKFIALKIILMTLDTWWFFAMISISGVFAVTFSVVFAYVADVTEEHERS 272
F I LM + WW+F MIS+SGVF+VTFSV+FAYVAD T+EHERS
Sbjct: 121 -------------FTCFPIPLMRISPWWYFGMISVSGVFSVTFSVIFAYVADFTQEHERS 167
Query: 273 LAYGLSFSFSQVSATFAASMVFSPALGAYLEKTYSLSLVVAVATAVAILDVFFILVAVPE 332
AYG VSATFAAS+V SPA+G YL Y SLVV VAT VA+LD+ FILVAVPE
Sbjct: 168 TAYGW------VSATFAASLVSSPAIGTYLSSNYGDSLVVLVATVVALLDICFILVAVPE 221
Query: 333 SLPEKVRQASWGGAPISWEQADPFASLRKVGKDQTILMLCVTVFLSYLPEAGQYSCLFVY 392
SLPEK+R ASWG A ISW+QADPFASL+KVGKD T+L++C+TVFLSYLPEAGQYS F+Y
Sbjct: 222 SLPEKIRPASWG-AQISWKQADPFASLKKVGKDSTVLLICITVFLSYLPEAGQYSSFFLY 280
Query: 393 LKLVMGFDEVHVAVFIAVIGTLSVSAQ-IILGCLMNVLGAKHTIIIGLVFEMLQLMWYGF 451
L+ V+GF V + FIA++G LS+ AQ + L LM LG K+T+++GL F++LQL WYGF
Sbjct: 281 LRQVIGFGSVKIVAFIAMVGILSILAQTVFLSKLMRSLGNKNTVLLGLGFQILQLAWYGF 340
Query: 452 GSQMWMMWAAGILASLASITYPAISALVSMHSDADRQGLVQGMVTGMRGLCNGLGPAMFG 511
G+Q WMMWAAG +A+++SIT+PA+SAL+S ++++D+QG+ QG++TG+RGLCNGLGPA++G
Sbjct: 341 GAQAWMMWAAGTVAAMSSITFPAVSALISRNAESDQQGVAQGIITGIRGLCNGLGPALYG 400
Query: 512 LIFYMFHVDLSD-GPDVGPGTLANRTNNVNSYPSVIPGPPFVFGALLVIAALLVATFIPE 570
IFY+FHV+L++ GP + ++N + IPGPPF+FGA +V+ + LVA FIPE
Sbjct: 401 FIFYLFHVELNELGPKL-------DSDNDPLQGAFIPGPPFLFGACIVLMSFLVALFIPE 453
Query: 571 SIVTRSVGTTQLRRQSSVGSVAV 593
R G Q S GS++
Sbjct: 454 ---YRKTGGVQKHNNSISGSLST 473
>sp|Q5VZR4|HIAL2_HUMAN Hippocampus abundant transcript-like protein 2 OS=Homo sapiens
GN=HIATL2 PE=2 SV=1
Length = 134
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/93 (74%), Positives = 77/93 (82%)
Query: 92 SGIGEPSVYHALVVIFLEFFAWGLLTMPIISVLNRTFPDHTFLMNGLIMGIKGFLSFLSA 151
G G PSVYHA +VIFLEFFAWGLLT P+++VL+ TF HTFLMNGLI G+KG LSFLSA
Sbjct: 38 QGFGPPSVYHAAIVIFLEFFAWGLLTTPMLTVLHETFSQHTFLMNGLIQGVKGLLSFLSA 97
Query: 152 PLIGALSDLWGRKLFLLITVFVTCLPIPLMTLD 184
PLIGALSD+WGRK FLL TVF TC PIPLM +
Sbjct: 98 PLIGALSDVWGRKPFLLGTVFFTCFPIPLMRIS 130
>sp|P02982|TCR1_ECOLX Tetracycline resistance protein, class A OS=Escherichia coli
GN=tetA PE=3 SV=2
Length = 399
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 171/407 (42%), Gaps = 78/407 (19%)
Query: 116 LTMPIISVLNRTF--PDHTFLMNGLIMGIKGFLSFLSAPLIGALSDLWGRKLFLLITVFV 173
L MP++ L R + G+++ + + F AP++GALSD +GR+ LL
Sbjct: 23 LIMPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVLGALSDRFGRRPVLL----- 77
Query: 174 TCLPIPLMTLDTWWFFAMISISGVFAVTFSVVFAYVADVTEEHERSLAYGLKFIALKIIL 233
+S++G +V +A +A F+
Sbjct: 78 ------------------VSLAGA-----AVDYAIMATA------------PFL------ 96
Query: 234 MTLDTWWFFAMISISGVFAVTFSVVFAYVADVTEEHERSLAYGLSFSFSQVSATFAASMV 293
W + ++G+ T +V AY+AD+T+ ER+ +G +SA F MV
Sbjct: 97 -----WVLYIGRIVAGITGATGAVAGAYIADITDGDERARHFGF------MSACFGFGMV 145
Query: 294 FSPALGAYLEKTYSLSLVVAVATAVAILDVFFILVAVPESLPEKVRQASWGGAPISWEQA 353
P LG L +S A A+ L+ +PES + R P+ E
Sbjct: 146 AGPVLGG-LMGGFSPHAPFFAAAALNGLNFLTGCFLLPESHKGERR-------PLRREAL 197
Query: 354 DPFASLRKVGKDQTILMLCVTVFLSYLPEAGQYSCLFVYLKLVMGFDEVH-----VAVFI 408
+P AS R + T++ + VF + GQ L ++ G D H + + +
Sbjct: 198 NPLASFRWA-RGMTVVAALMAVFF-IMQLVGQVPA---ALWVIFGEDRFHWDATTIGISL 252
Query: 409 AVIGTLSVSAQ-IILGCLMNVLGAKHTIIIGLVFEMLQLMWYGFGSQMWMMWAAGILASL 467
A G L AQ +I G + LG + +++G++ + + F ++ WM + +L +
Sbjct: 253 AAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFATRGWMAFPIMVLLAS 312
Query: 468 ASITYPAISALVSMHSDADRQGLVQGMVTGMRGLCNGLGPAMFGLIF 514
I PA+ A++S D +RQG +QG + + L + +GP +F I+
Sbjct: 313 GGIGMPALQAMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAIY 359
>sp|P02981|TCR3_ECOLX Tetracycline resistance protein, class C OS=Escherichia coli
GN=tetA PE=1 SV=1
Length = 396
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 164/402 (40%), Gaps = 82/402 (20%)
Query: 116 LTMPIISVLNRTF--PDHTFLMNGLIMGIKGFLSFLSAPLIGALSDLWGRKLFLLITVFV 173
L MP++ L R D G+++ + + FL AP++GALSD +GR+ LL ++
Sbjct: 23 LVMPVLPGLLRDIVHSDSIASHYGVLLALYALMQFLCAPVLGALSDRFGRRPVLLASLLG 82
Query: 174 TCLPIPLMTLDTWWFFAMISISGVFAVTFSVVFAYVADVTEEHERSLAYGLKFIALKIIL 233
T+D +A+++ + V
Sbjct: 83 A-------TID----YAIMATTPVL----------------------------------- 96
Query: 234 MTLDTWWFFAMISISGVFAVTFSVVFAYVADVTEEHERSLAYGLSFSFSQVSATFAASMV 293
W +A ++G+ T +V AY+AD+T+ +R+ +GL +SA F MV
Sbjct: 97 -----WILYAGRIVAGITGATGAVAGAYIADITDGEDRARHFGL------MSACFGVGMV 145
Query: 294 FSPALGAYLEKT--YSLSLVVAVATAVAILDVFFILVAVPESLPEKVRQASWGGAPISWE 351
P G L ++ L AV + +L F++ ES + R P+
Sbjct: 146 AGPVAGGLLGAISLHAPFLAAAVLNGLNLLLGCFLM---QESHKGERR-------PMPLR 195
Query: 352 QADPFASLRKVGKDQTILMLCVTVFLSYLPEAGQYSCLFVYLKLVMGFDEVH-----VAV 406
+P +S R + TI+ +TVF + GQ L ++ G D + +
Sbjct: 196 AFNPVSSFRWA-RGMTIVAALMTVFF-IMQLVGQVPA---ALWVIFGEDRFRWSATMIGL 250
Query: 407 FIAVIGTLSVSAQ-IILGCLMNVLGAKHTIIIGLVFEMLQLMWYGFGSQMWMMWAAGILA 465
+AV G L AQ + G G K II G+ + L + F ++ WM + IL
Sbjct: 251 SLAVFGILHALAQAFVTGPATKRFGEKQAIIAGMAADALGYVLLAFATRGWMAFPIMILL 310
Query: 466 SLASITYPAISALVSMHSDADRQGLVQGMVTGMRGLCNGLGP 507
+ I PA+ A++S D D QG +QG + + L + GP
Sbjct: 311 ASGGIGMPALQAMLSRQVDDDHQGQLQGSLAALTSLTSITGP 352
>sp|P51563|TCR7_VIBAN Tetracycline resistance protein, class G OS=Vibrio anguillarum
GN=tetA PE=3 SV=1
Length = 393
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 119/265 (44%), Gaps = 15/265 (5%)
Query: 247 ISGVFAVTFSVVFAYVADVTEEHERSLAYGLSFSFSQVSATFAASMVFSPALGAYLEKTY 306
+SGV T +V + +AD T E R+ +G + A + A M+ PALG L
Sbjct: 103 VSGVTGATGAVAASTIADSTGEGSRARWFG------YMGACYGAGMIAGPALGGMLGGIS 156
Query: 307 SLSLVVAVATAVAILDVFFILVAVPESLPEKVRQASWGGAPISWEQADPFASLRKVGKDQ 366
+ + +A A +L+ F L+A L E G P+ + PF LR +
Sbjct: 157 AHAPFIAAA----LLNGFAFLLAC-IFLKETHHSHGGTGKPV---RIKPFVLLRLDDALR 208
Query: 367 TILMLCVTVFLSYLPEAGQYSCLFVYLKLVMGFDEVHVAVFIAVIG-TLSVSAQIILGCL 425
+ L F+ L + +Y + ++ V + +A G T ++ + G L
Sbjct: 209 GLGALFAVFFIIQLIGQVPAALWVIYGEDRFQWNTATVGLSLAAFGATHAIFQAFVTGPL 268
Query: 426 MNVLGAKHTIIIGLVFEMLQLMWYGFGSQMWMMWAAGILASLASITYPAISALVSMHSDA 485
+ LG + T++ G+ + + F +Q WM++ +L + + PA+ A++S + +
Sbjct: 269 SSRLGERRTLLFGMAADGTGFVLLAFATQGWMVFPILLLLAAGGVGMPALQAMLSNNVSS 328
Query: 486 DRQGLVQGMVTGMRGLCNGLGPAMF 510
++QG +QG +T + L + GP F
Sbjct: 329 NKQGALQGTLTSLTNLSSIAGPLGF 353
Score = 40.0 bits (92), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 102 ALVVIFLEFFAWGLLTMPIISVLNRTF--PDHTFLMNGLIMGIKGFLSFLSAPLIGALSD 159
AL+++ L+ GL+ MP++ L R + G ++ + + + AP++G LSD
Sbjct: 8 ALLIVGLDAMGLGLI-MPVLPTLLRELVPAEQVAGHYGALLSLYALMQVVFAPMLGQLSD 66
Query: 160 LWGRKLFLLITVFVTCLPIPLMTLDT--WWFFAMISISGVFAVTFSVVFAYVADVTEEHE 217
+GR+ LL ++ + +M W + +SGV T +V + +AD T E
Sbjct: 67 SYGRRPVLLASLAGAAVDYTIMASAPVLWVLYIGRLVSGVTGATGAVAASTIADSTGEGS 126
Query: 218 RSLAYG 223
R+ +G
Sbjct: 127 RARWFG 132
>sp|P33733|TCR4_SALOR Tetracycline resistance protein, class D OS=Salmonella ordonez
GN=tetA PE=3 SV=1
Length = 394
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 166/429 (38%), Gaps = 82/429 (19%)
Query: 94 IGEPSVYHALVVIFLEFFAWGLLTMPIISVLNRTFPDHTFLMN--GLIMGIKGFLSFLSA 151
+ +P+V ALV+ L+ GL+ MP++ L R + + N G+++ + + A
Sbjct: 1 MNKPAVI-ALVITLLDAMGIGLI-MPVLPSLLREYLPEADVANHYGILLALYAVMQVCFA 58
Query: 152 PLIGALSDLWGRKLFLLITVFVTCLPIPLMTLDTWWFFAMISISGVFAVTFSVVFAYVAD 211
PL+G SD GR+ LL+ S++G
Sbjct: 59 PLLGRWSDKLGRRPVLLL-----------------------SLAGA-------------- 81
Query: 212 VTEEHERSLAYGLKFIALKIILMTLDTWWFFAMISISGVFAVTFSVVFAYVADVTEEHER 271
A+ +AL +L W + ISG+ T +V + VAD T ER
Sbjct: 82 ---------AFDYTLLALSNVL-----WMLYLGRIISGITGATGAVAASVVADSTAVSER 127
Query: 272 SLAYGLSFSFSQVSATFAASMVFSPALGAYLEKTYSLSL---VVAVATAVAILDVFFIL- 327
+ +G ++ A F A ++ PA+G L S L + A+ A L VFFI
Sbjct: 128 TAWFG------RLGAAFGAGLIAGPAIGG-LAGDISPHLPFVIAAILNACTFLMVFFIFK 180
Query: 328 -VAVPESLPEKVRQASWGGAPISWEQADPFASLRKVGKDQTILMLCVTVFLSYLPEAGQY 386
E P +Q S A + + + + +L F + L
Sbjct: 181 PAVQTEEKPADEKQES--------------AGISFITLLKPLALLLFVFFTAQLIGQIPA 226
Query: 387 SCLFVYLKLVMGFDEVHVAVFIAVIGTLSVSAQ-IILGCLMNVLGAKHTIIIGLVFEMLQ 445
+ ++ + +D V +A +G + Q ++ G L L K I G + +
Sbjct: 227 TVWVLFTESRFAWDSAAVGFSLAGLGAMHALFQAVVAGALAKRLSEKTIIFAGFIADATA 286
Query: 446 LMWYGFGSQMWMMWAAGILASLASITYPAISALVSMHSDADRQGLVQGMVTGMRGLCNGL 505
+ + WM++ IL + I PA+ ++S + A QG +QG++ + L
Sbjct: 287 FLLMSAITSGWMVYPVLILLAGGGIALPALQGIISAGASAANQGKLQGVLVSLTNLTGVA 346
Query: 506 GPAMFGLIF 514
GP +F IF
Sbjct: 347 GPLLFAFIF 355
>sp|Q07282|TCR5_ECOLX Tetracycline resistance protein, class E OS=Escherichia coli
GN=tetA PE=3 SV=1
Length = 405
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 121/272 (44%), Gaps = 20/272 (7%)
Query: 247 ISGVFAVTFSVVFAYVADVTEEHERSLAYGLSFSFSQVSATFAASMVFSPALGAYLEKTY 306
I+G+ T +V + +ADVT E R+ +G+ + A F M+ P +G + +
Sbjct: 103 IAGITGATGAVAASTIADVTPEESRTHWFGM------MGACFGGGMIAGPVIGGFAGQLS 156
Query: 307 SLS--LVVAVATAVAILDVFFILVAVPESLPEKVRQASWGGAPISWEQ-ADPFASLRKVG 363
+ + A +A L FIL + A+ + E + +S+R++
Sbjct: 157 VQAPFMFAAAINGLAFLVSLFIL--------HETHNANQVSDELKNETINETTSSIREMI 208
Query: 364 KDQTILMLCVTVFLSYLPEAGQYSCLFVYLKLVMGFDEVHVAVFIAVIG-TLSVSAQIIL 422
+ L+ V F+ L + ++ + +D V V V +AV G T ++ +
Sbjct: 209 SPLSGLL--VVFFIIQLIGQIPATLWVLFGEERFAWDGVMVGVSLAVFGLTHALFQGLAA 266
Query: 423 GCLMNVLGAKHTIIIGLVFEMLQLMWYGFGSQMWMMWAAGILASLASITYPAISALVSMH 482
G + LG + I +G++ + L +Q WM+W +L + IT PA+ ++S+
Sbjct: 267 GFIAKHLGERKAIAVGILADGCGLFLLAVITQSWMVWPVLLLLACGGITLPALQGIISVR 326
Query: 483 SDADRQGLVQGMVTGMRGLCNGLGPAMFGLIF 514
QG +QG++T + L +GP +F ++
Sbjct: 327 VGQVAQGQLQGVLTSLTHLTAVIGPLVFAFLY 358
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 5/131 (3%)
Query: 98 SVYHALVVIFLEFFAWGLLTMPIISVLNRTFPDHTFLMN--GLIMGIKGFLSFLSAPLIG 155
+V ALV+IFL+ G++ MP++ L R F + G+++ + + + APL+G
Sbjct: 4 TVMMALVIIFLDAMGIGII-MPVLPALLREFVGKANVAENYGVLLALYAMMQVIFAPLLG 62
Query: 156 ALSDLWGRKLFLLITVFVTCLPIPLMTLDT--WWFFAMISISGVFAVTFSVVFAYVADVT 213
SD GR+ LL+++ L LM + W + I+G+ T +V + +ADVT
Sbjct: 63 RWSDRIGRRPVLLLSLLGATLDYALMATASVVWVLYLGRLIAGITGATGAVAASTIADVT 122
Query: 214 EEHERSLAYGL 224
E R+ +G+
Sbjct: 123 PEESRTHWFGM 133
>sp|P02980|TCR2_ECOLX Tetracycline resistance protein, class B OS=Escherichia coli
GN=tetA PE=1 SV=1
Length = 401
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 117/271 (43%), Gaps = 19/271 (7%)
Query: 247 ISGVFAVTFSVVFAYVADVTEEHERSLAYGLSFSFSQVSATFAASMVFSPALGAYLEKT- 305
+SG+ T +V + +AD T +R +G + A+F ++ P +G + +
Sbjct: 103 LSGITGATGAVAASVIADTTSASQRVKWFG------WLGASFGLGLIAGPIIGGFAGEIS 156
Query: 306 -YSLSLVVAVATAVAILDVFFILVAVPESLPEKVRQASWGGAPISWEQADPFASLRKVGK 364
+S + A+ V L V F + + + + + +L K
Sbjct: 157 PHSPFFIAALLNIVTFLVVMFWFRETKNTRDNTDTEVG-----VETQSNSVYITLFK--- 208
Query: 365 DQTILMLCVTVFLSYLPEAGQYSCLFVYLKLVMGFDEVHVAVFIAVIGTL-SVSAQIILG 423
T+ +L + F + L + ++ + G++ + V +A +G L SV + G
Sbjct: 209 --TMPILLIIYFSAQLIGQIPATVWVLFTENRFGWNSMMVGFSLAGLGLLHSVFQAFVAG 266
Query: 424 CLMNVLGAKHTIIIGLVFEMLQLMWYGFGSQMWMMWAAGILASLASITYPAISALVSMHS 483
+ G K +++G + + + F S+ W+++ IL + I PA+ ++S+ +
Sbjct: 267 RIATKWGEKTAVLLGFIADSSAFAFLAFISEGWLVFPVLILLAGGGIALPALQGVMSIQT 326
Query: 484 DADRQGLVQGMVTGMRGLCNGLGPAMFGLIF 514
+ +QG +QG++ + +GP +F +I+
Sbjct: 327 KSHQQGALQGLLVSLTNATGVIGPLLFAVIY 357
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 102 ALVVIFLEFFAWGLLTMPIISVLNRTFPDHTFLMN--GLIMGIKGFLSFLSAPLIGALSD 159
ALV+ L+ GL+ MP++ L R F + N G+++ + + + AP +G +SD
Sbjct: 8 ALVITLLDAMGIGLI-MPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPWLGKMSD 66
Query: 160 LWGRKLFLLITVFVTCLPIPLMTLDT--WWFFAMISISGVFAVTFSVVFAYVADVTEEHE 217
+GR+ LL+++ L L+ + W + +SG+ T +V + +AD T +
Sbjct: 67 RFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIADTTSASQ 126
Query: 218 R-------SLAYGLKFIALKII 232
R ++GL IA II
Sbjct: 127 RVKWFGWLGASFGLGLIAGPII 148
>sp|P51564|TCR8_PASMD Tetracycline resistance protein, class H OS=Pasteurella multocida
GN=tetA PE=3 SV=1
Length = 400
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Query: 399 FDEVHVAVFIAVIGTLSVSAQ-IILGCLMNVLGAKHTIIIGLVFEMLQLMWYGFGSQMWM 457
++ + + +AV+G L + Q I+ G L G K TI+I + +M+ + + +W+
Sbjct: 242 WNTTSIGMSLAVLGVLHIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCLLLAWIGHVWV 301
Query: 458 MWAAGILASLASITYPAISALVSMHSDADRQGLVQGMVTGMRGLCNGLGPAMFGLIFYMF 517
+ A I + + PA+ +S D + QG +QG + + + +GP +F I Y +
Sbjct: 302 ILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFAFI-YSY 360
Query: 518 HVDLSDG 524
V DG
Sbjct: 361 SVAYWDG 367
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 116 LTMPIISVLNRTFPDHTFLMN--GLIMGIKGFLSFLSAPLIGALSDLWGRKLFLLITVFV 173
L MP++ L F L G+++ + + + AP++G LSD +GRK LL ++
Sbjct: 21 LIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAPILGRLSDKYGRKPILLFSLLG 80
Query: 174 TCLPIPLMTLDT--WWFFAMISISGVFAVTFSVVFAYVADVTEEHERS 219
L LM T W + I+G+ T +V + ++DVT R+
Sbjct: 81 AALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASAMSDVTPAKNRT 128
>sp|Q0P5M9|MFS10_BOVIN Major facilitator superfamily domain-containing protein 10 OS=Bos
taurus GN=MFSD10 PE=2 SV=1
Length = 456
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 88/214 (41%), Gaps = 65/214 (30%)
Query: 131 HTFLMNGLIMGIKGFLSFLSAPLIGALSDLWGRKLFLLITVFVTCLPIPLMTLDTWWFFA 190
++ L GLI + L FLSAPL GALSD GR+ P M
Sbjct: 85 NSVLFGGLIGSVFSLLQFLSAPLTGALSDCLGRR--------------PGM--------- 121
Query: 191 MISISGVFAVTFSVVFAYVADVTEEHERSLAYGLKFIALKIILMTLDTWWFFAMISISGV 250
++S++GV A +++V A +S A F+A ++I G+
Sbjct: 122 LLSLAGV-ATSYAVWAA---------SKSFA---AFLASRVI---------------GGI 153
Query: 251 FAVTFSVVFAYVADVTEEHERSLAYGLSFSFSQVSATFAASMVFSPALGAYL--EKTYSL 308
S+ A VAD+ RS + + F+ P LGA+L E L
Sbjct: 154 SKGNVSLCTAIVADLGSPSARSKGMAV------IGVAFSLGFTLGPTLGAFLPSETVPWL 207
Query: 309 SLVVAVATAVAILDVFFILVAVPESLPEKVRQAS 342
+L+ AV+ D+ FI +PE+LP + R S
Sbjct: 208 ALLFAVS------DLLFIWCFLPETLPPEKRAPS 235
>sp|Q9D2V8|MFS10_MOUSE Major facilitator superfamily domain-containing protein 10 OS=Mus
musculus GN=Mfsd10 PE=2 SV=1
Length = 456
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 61/212 (28%)
Query: 131 HTFLMNGLIMGIKGFLSFLSAPLIGALSDLWGRKLFLLITVFVTCLPIPLMTLDTWWFFA 190
++ L GLI L F SAPL GA SD GR+ P+M
Sbjct: 85 NSVLFGGLIGSAFSLLQFFSAPLTGAASDYLGRR--------------PVM--------- 121
Query: 191 MISISGVFAVTFSVVFAYVADVTEEHERSLAYGLKFIALKIILMTLDTWWFFAMISISGV 250
M+S++G+ A++++V A F A F A I G+
Sbjct: 122 MLSLTGL-AISYAV---------------WATSRSFKA------------FLASRVIGGI 153
Query: 251 FAVTFSVVFAYVADVTEEHERSLAYGLSFSFSQVSATFAASMVFSPALGAYLEKTYSLSL 310
++ A VAD+ RS + + F+ + P LGA+L S+ +
Sbjct: 154 SKGNVNLSTAIVADLGSPPTRSQGMAV------IGVAFSLAFTLGPMLGAFL----SVEM 203
Query: 311 VVAVATAVAILDVFFILVAVPESLPEKVRQAS 342
V ++ AI D+ FI +PE+LP++ R +S
Sbjct: 204 VPWISLLFAISDMLFIFCFLPETLPQEKRASS 235
>sp|P42432|NASA_BACSU Nitrate transporter OS=Bacillus subtilis (strain 168) GN=nasA PE=2
SV=2
Length = 401
Score = 41.2 bits (95), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 419 QIILGCLMNVLGAKHTIIIGLVFEMLQLMWYGFGSQ-MWMMWAAGILASLASITYPAISA 477
+IILG L + +G K T +IG++ M+ L+W FG + + ++A GIL +A ++
Sbjct: 65 RIILGILTDRIGPKKTAVIGMLVTMIPLLWGTFGGRSLTELYAIGILLGVAGASFAVALP 124
Query: 478 LVSMHSDADRQGLVQGM 494
+ S QGL G+
Sbjct: 125 MASRWYPPHLQGLAMGI 141
>sp|P96712|BMR3_BACSU Multidrug resistance protein 3 OS=Bacillus subtilis (strain 168)
GN=bmr3 PE=1 SV=1
Length = 512
Score = 39.3 bits (90), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 257 VVFAYVADVTEEHERSLAYGLSFSFSQVSATFAASMVFSPALGAYLEKTYSLSLVVAVAT 316
+ F + D+ +R G+ A F S V P LGA + + S V +
Sbjct: 120 IAFTIIFDLFPPEKRGKMSGM------FGAVFGLSSVLGPLLGAIITDSISWHWVFYINV 173
Query: 317 AVAILDVFFILVAVPESLPEKVRQASWGGA 346
+ L +FFI+ ESL + ++ WGGA
Sbjct: 174 PIGALSLFFIIRYYKESLEHRKQKIDWGGA 203
>sp|B1JFW5|NANT_YERPY Putative sialic acid transporter OS=Yersinia pseudotuberculosis
serotype O:3 (strain YPIII) GN=nanT PE=3 SV=1
Length = 510
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 3 KENSKLVSKMPVKASRKMVGLIIRSRKSILNDGIVTKVPLWQYICMDSLETTYVLGRVRK 62
K SK V R MV ++ RS S LN G+ + Y+C + +T
Sbjct: 215 KAQSKQKKGKQV-TDRNMVDILYRSHLSYLNIGLTIFAAVSLYLCFTGMVST-------- 265
Query: 63 LVKSLIKSLVKSTKSPVNSELFVWFVLQTSGIGEPSVYHALVVIFLEF-FAWGLLT-MPI 120
L+ + + +F++F++QTSG P+ +VV+F F ++W + +P
Sbjct: 266 --------LLVVVLGILCAAIFIYFMVQTSGDRWPTGVMLMVVVFCAFLYSWPIQALLPT 317
Query: 121 ISVLNRTFPDHTFLMNGLIMGIKGFLSFLSAPLIGALSDLWG-RKLFLLITVFVTCLPIP 179
++ + HT G I+ GF + + + G L D G RK ++ + L IP
Sbjct: 318 YLKMDLGYDPHTV---GNILFFSGFGAAVGCCVGGFLGDWLGTRKAYVTSLLISQLLIIP 374
Query: 180 LMTLD 184
L +
Sbjct: 375 LFAIQ 379
>sp|Q8ZCH3|NANT_YERPE Putative sialic acid transporter OS=Yersinia pestis GN=nanT PE=3
SV=1
Length = 510
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 3 KENSKLVSKMPVKASRKMVGLIIRSRKSILNDGIVTKVPLWQYICMDSLETTYVLGRVRK 62
K SK V R MV ++ RS S LN G+ + Y+C + +T
Sbjct: 215 KAQSKQKKGKQV-TDRNMVDILYRSHLSYLNIGLTIFAAVSLYLCFTGMVST-------- 265
Query: 63 LVKSLIKSLVKSTKSPVNSELFVWFVLQTSGIGEPSVYHALVVIFLEF-FAWGLLT-MPI 120
L+ + + +F++F++QTSG P+ +VV+F F ++W + +P
Sbjct: 266 --------LLVVVLGILCAAIFIYFMVQTSGDRWPTGVMLMVVVFCAFLYSWPIQALLPT 317
Query: 121 ISVLNRTFPDHTFLMNGLIMGIKGFLSFLSAPLIGALSDLWG-RKLFLLITVFVTCLPIP 179
++ + HT G I+ GF + + + G L D G RK ++ + L IP
Sbjct: 318 YLKMDLGYDPHTV---GNILFFSGFGAAVGCCVGGFLGDWLGTRKAYVTSLLISQLLIIP 374
Query: 180 LMTLD 184
L +
Sbjct: 375 LFAIQ 379
>sp|Q1C5V2|NANT_YERPA Putative sialic acid transporter OS=Yersinia pestis bv. Antiqua
(strain Antiqua) GN=nanT PE=3 SV=1
Length = 510
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 3 KENSKLVSKMPVKASRKMVGLIIRSRKSILNDGIVTKVPLWQYICMDSLETTYVLGRVRK 62
K SK V R MV ++ RS S LN G+ + Y+C + +T
Sbjct: 215 KAQSKQKKGKQV-TDRNMVDILYRSHLSYLNIGLTIFAAVSLYLCFTGMVST-------- 265
Query: 63 LVKSLIKSLVKSTKSPVNSELFVWFVLQTSGIGEPSVYHALVVIFLEF-FAWGLLT-MPI 120
L+ + + +F++F++QTSG P+ +VV+F F ++W + +P
Sbjct: 266 --------LLVVVLGILCAAIFIYFMVQTSGDRWPTGVMLMVVVFCAFLYSWPIQALLPT 317
Query: 121 ISVLNRTFPDHTFLMNGLIMGIKGFLSFLSAPLIGALSDLWG-RKLFLLITVFVTCLPIP 179
++ + HT G I+ GF + + + G L D G RK ++ + L IP
Sbjct: 318 YLKMDLGYDPHTV---GNILFFSGFGAAVGCCVGGFLGDWLGTRKAYVTSLLISQLLIIP 374
Query: 180 LMTLD 184
L +
Sbjct: 375 LFAIQ 379
>sp|Q668K2|NANT_YERPS Putative sialic acid transporter OS=Yersinia pseudotuberculosis
serotype I (strain IP32953) GN=nanT PE=3 SV=1
Length = 510
Score = 37.7 bits (86), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 3 KENSKLVSKMPVKASRKMVGLIIRSRKSILNDGIVTKVPLWQYICMDSLETTYVLGRVRK 62
K SK V R MV ++ RS S LN G+ + Y+C + +T
Sbjct: 215 KAQSKQKKGKQV-TDRNMVDILYRSHLSYLNIGLTIFAAVSLYLCFTGMVST-------- 265
Query: 63 LVKSLIKSLVKSTKSPVNSELFVWFVLQTSGIGEPSVYHALVVIFLEF-FAWGLLT-MPI 120
L+ + + +F++F++QTSG P+ +VV+F F ++W + +P
Sbjct: 266 --------LLVVVLGILCAAIFIYFMVQTSGDRWPTGVMLMVVVFCAFLYSWPIQALLPT 317
Query: 121 ISVLNRTFPDHTFLMNGLIMGIKGFLSFLSAPLIGALSDLWG-RKLFLLITVFVTCLPIP 179
++ + HT G I+ GF + + + G L D G RK ++ + L IP
Sbjct: 318 YLKMDLGYDPHTV---GNILFFSGFGAAVGCCVGGFLGDWLGTRKAYVTSLLISQLLIIP 374
Query: 180 LMTLD 184
L +
Sbjct: 375 LFAIQ 379
>sp|A9QZJ2|NANT_YERPG Putative sialic acid transporter OS=Yersinia pestis bv. Antiqua
(strain Angola) GN=nanT PE=3 SV=1
Length = 510
Score = 37.7 bits (86), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 3 KENSKLVSKMPVKASRKMVGLIIRSRKSILNDGIVTKVPLWQYICMDSLETTYVLGRVRK 62
K SK V R MV ++ RS S LN G+ + Y+C + +T
Sbjct: 215 KAQSKQKKGKQV-TDRNMVDILYRSHLSYLNIGLTIFAAVSLYLCFTGMVST-------- 265
Query: 63 LVKSLIKSLVKSTKSPVNSELFVWFVLQTSGIGEPSVYHALVVIFLEF-FAWGLLT-MPI 120
L+ + + +F++F++QTSG P+ +VV+F F ++W + +P
Sbjct: 266 --------LLVVVLGILCAAIFIYFMVQTSGDRWPTGVMLMVVVFCAFLYSWPIQALLPT 317
Query: 121 ISVLNRTFPDHTFLMNGLIMGIKGFLSFLSAPLIGALSDLWG-RKLFLLITVFVTCLPIP 179
++ + HT G I+ GF + + + G L D G RK ++ + L IP
Sbjct: 318 YLKMDLGYDPHTV---GNILFFSGFGAAVGCCVGGFLGDWLGTRKAYVTSLLISQLLIIP 374
Query: 180 LMTLD 184
L +
Sbjct: 375 LFAIQ 379
>sp|B2K942|NANT_YERPB Putative sialic acid transporter OS=Yersinia pseudotuberculosis
serotype IB (strain PB1/+) GN=nanT PE=3 SV=1
Length = 510
Score = 37.7 bits (86), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 3 KENSKLVSKMPVKASRKMVGLIIRSRKSILNDGIVTKVPLWQYICMDSLETTYVLGRVRK 62
K SK V R MV ++ RS S LN G+ + Y+C + +T
Sbjct: 215 KAQSKQKKGKQV-TDRNMVDILYRSHLSYLNIGLTIFAAVSLYLCFTGMVST-------- 265
Query: 63 LVKSLIKSLVKSTKSPVNSELFVWFVLQTSGIGEPSVYHALVVIFLEF-FAWGLLT-MPI 120
L+ + + +F++F++QTSG P+ +VV+F F ++W + +P
Sbjct: 266 --------LLVVVLGILCAAIFIYFMVQTSGDRWPTGVMLMVVVFCAFLYSWPIQALLPT 317
Query: 121 ISVLNRTFPDHTFLMNGLIMGIKGFLSFLSAPLIGALSDLWG-RKLFLLITVFVTCLPIP 179
++ + HT G I+ GF + + + G L D G RK ++ + L IP
Sbjct: 318 YLKMDLGYDPHTV---GNILFFSGFGAAVGCCVGGFLGDWLGTRKAYVTSLLISQLLIIP 374
Query: 180 LMTLD 184
L +
Sbjct: 375 LFAIQ 379
>sp|A7FG99|NANT_YERP3 Putative sialic acid transporter OS=Yersinia pseudotuberculosis
serotype O:1b (strain IP 31758) GN=nanT PE=3 SV=1
Length = 510
Score = 37.7 bits (86), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 3 KENSKLVSKMPVKASRKMVGLIIRSRKSILNDGIVTKVPLWQYICMDSLETTYVLGRVRK 62
K SK V R MV ++ RS S LN G+ + Y+C + +T
Sbjct: 215 KAQSKQKKGKQV-TDRNMVDILYRSHLSYLNIGLTIFAAVSLYLCFTGMVST-------- 265
Query: 63 LVKSLIKSLVKSTKSPVNSELFVWFVLQTSGIGEPSVYHALVVIFLEF-FAWGLLT-MPI 120
L+ + + +F++F++QTSG P+ +VV+F F ++W + +P
Sbjct: 266 --------LLVVVLGILCAAIFIYFMVQTSGDRWPTGVMLMVVVFCAFLYSWPIQALLPT 317
Query: 121 ISVLNRTFPDHTFLMNGLIMGIKGFLSFLSAPLIGALSDLWG-RKLFLLITVFVTCLPIP 179
++ + HT G I+ GF + + + G L D G RK ++ + L IP
Sbjct: 318 YLKMDLGYDPHTV---GNILFFSGFGAAVGCCVGGFLGDWLGTRKAYVTSLLISQLLIIP 374
Query: 180 LMTLD 184
L +
Sbjct: 375 LFAIQ 379
>sp|A4TMJ0|NANT_YERPP Putative sialic acid transporter OS=Yersinia pestis (strain
Pestoides F) GN=nanT PE=3 SV=1
Length = 510
Score = 37.4 bits (85), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 3 KENSKLVSKMPVKASRKMVGLIIRSRKSILNDGIVTKVPLWQYICMDSLETTYVLGRVRK 62
K SK V R MV ++ RS S LN G+ + Y+C + +T
Sbjct: 215 KAQSKQKKGKQV-TDRNMVDILYRSHLSYLNIGLTIFAVVSLYLCFTGMVST-------- 265
Query: 63 LVKSLIKSLVKSTKSPVNSELFVWFVLQTSGIGEPSVYHALVVIFLEF-FAWGLLT-MPI 120
L+ + + +F++F++QTSG P+ +VV+F F ++W + +P
Sbjct: 266 --------LLVVVLGILCAAIFIYFMVQTSGDRWPTGVMLMVVVFCAFLYSWPIQALLPT 317
Query: 121 ISVLNRTFPDHTFLMNGLIMGIKGFLSFLSAPLIGALSDLWG-RKLFLLITVFVTCLPIP 179
++ + HT G I+ GF + + + G L D G RK ++ + L IP
Sbjct: 318 YLKMDLGYDPHTV---GNILFFSGFGAAVGCCVGGFLGDWLGTRKAYVTSLLISQLLIIP 374
Query: 180 LMTLD 184
L +
Sbjct: 375 LFAIQ 379
>sp|P39843|BMR2_BACSU Multidrug resistance protein 2 OS=Bacillus subtilis (strain 168)
GN=blt PE=3 SV=1
Length = 400
Score = 36.6 bits (83), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 110/263 (41%), Gaps = 23/263 (8%)
Query: 258 VFAYVADVTEEHERSLAYGLSFSFSQVSATFAASMVFSPALGAYLEKTYSLSLVVAVATA 317
V AYVAD+T ERS A G VSA + + P + + + A+A
Sbjct: 119 VTAYVADITTLKERSKAMG------YVSAAISTGFIIGPGA-GGFIAGFGIRMPFFFASA 171
Query: 318 VAILDVFFILVAVPESLP-EKVRQASWGGAPISWEQADPFASLRKVGKDQTILMLCVTVF 376
+A++ + + ESL E+ Q S S + F K + + VF
Sbjct: 172 IALIAAVTSVFILKESLSIEERHQLS------SHTKESNFIKDLKRSIHPVYFIAFIIVF 225
Query: 377 LSYLPEAGQYSCLFVYLKLVMGFDEVHVAVFIAVIGTLSVSAQIIL-GCLMNVLGAKHTI 435
+ + + ++ GF +A I + ++V Q++L G L+N LG K I
Sbjct: 226 VMAFGLSAYETVFSLFSDHKFGFTPKDIAAIITISSIVAVVIQVLLFGKLVNKLGEKRMI 285
Query: 436 ----IIGLVFEMLQLMWYGFGSQMWMMWAAGILASLASITYPAISALVSMHSDADRQGLV 491
I G + + + GF + ++ + + PA++A +S + ++QG V
Sbjct: 286 QLCLITGAILAFVSTVMSGF---LTVLLVTCFIFLAFDLLRPALTAHLS-NMAGNQQGFV 341
Query: 492 QGMVTGMRGLCNGLGPAMFGLIF 514
GM + L N GPA+ G++F
Sbjct: 342 AGMNSTYTSLGNIFGPALGGILF 364
>sp|P54559|YQJV_BACSU Uncharacterized MFS-type transporter YqjV OS=Bacillus subtilis
(strain 168) GN=yqjV PE=3 SV=2
Length = 410
Score = 36.6 bits (83), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 137 GLIMGIKGFLSFLSAPLIGALSDLWGRKLFLLITVFVTCLPIPLMTL--DTWWFFAMISI 194
GL++ + L++ G +SD +GRK +L+++F L + W FF + ++
Sbjct: 48 GLVIAASSSVGILASFYGGYISDKFGRKNMMLVSIFGWMLVFAGFAAASNLWVFFVVNAL 107
Query: 195 SGVFAVTFS-VVFAYVADVTEEHERSLAYGLKFIALKI 231
+G+ F A ++D+TEE R L + L++ A+ I
Sbjct: 108 NGLCKSLFEPASKALLSDMTEEKTRLLVFNLRYAAINI 145
>sp|Q8C0T7|MFSD9_MOUSE Major facilitator superfamily domain-containing protein 9 OS=Mus
musculus GN=Mfsd9 PE=2 SV=1
Length = 466
Score = 36.6 bits (83), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 4/122 (3%)
Query: 104 VVIFLEFFAWGLLTMPIISVLNRTFPDHTFLMNGLIMGIKGFLSFLSAPLIGALSDLWGR 163
+V FL+ F ++ +P++++ R+ + ++ G++ G L S+ +G SD+ GR
Sbjct: 41 LVGFLDLFGVSMV-VPLLNLHVRSL-GASPVVAGIVGSSYGVLQLFSSTFVGCWSDVVGR 98
Query: 164 KLFLLITVFVTCLPIPLMTLDTWWF-FAMISIS-GVFAVTFSVVFAYVADVTEEHERSLA 221
+ LL+ + ++ L L+ + T F F + + GVF T S+ A ++D+ E ER L
Sbjct: 99 RSSLLVCILLSALGYLLLGMSTNVFLFTLARVPVGVFKHTLSISRALLSDLVTEKERPLV 158
Query: 222 YG 223
G
Sbjct: 159 LG 160
>sp|Q8NBP5|MFSD9_HUMAN Major facilitator superfamily domain-containing protein 9 OS=Homo
sapiens GN=MFSD9 PE=2 SV=2
Length = 474
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 4/122 (3%)
Query: 104 VVIFLEFFAWGLLTMPIISVLNRTFPDHTFLMNGLIMGIKGFLSFLSAPLIGALSDLWGR 163
+V FL+ F ++ +P++S+ ++ + + G++ G L S+ L+G SD+ GR
Sbjct: 51 LVGFLDLFGVSMV-VPLLSLHVKSL-GASPTVAGIVGSSYGILQLFSSTLVGCWSDVVGR 108
Query: 164 KLFLLITVFVTCLPIPLMTLDTWWFFAMISI--SGVFAVTFSVVFAYVADVTEEHERSLA 221
+ LL + ++ L L+ T F +++ +G+F T S+ A ++DV E ER L
Sbjct: 109 RSSLLACILLSALGYLLLGAATNVFLFVLARVPAGIFKHTLSISRALLSDVVPEKERPLV 168
Query: 222 YG 223
G
Sbjct: 169 IG 170
>sp|D8MQN9|MDTG_ERWBE Multidrug resistance protein MdtG OS=Erwinia billingiae (strain
Eb661) GN=mdtG PE=3 SV=1
Length = 411
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Query: 116 LTMPI----ISVLNRTFPDHTFLMNGLIMGIKGFLSFLSAPLIGALSDLWGRKLFLLITV 171
L MP + +L T P + +GL+ I S +++P G L+D GRK+ LL +
Sbjct: 33 LVMPFLPLYVELLGVTDPHSLNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSA 92
Query: 172 FVTCLPIPLMTLDT--WWFFAMISISGVFAVTFSVVFAYVADVTEEHERSLAYG 223
+ + LM L T W F A+ ++ G+ A +A ++ A G
Sbjct: 93 LGMSVVMVLMGLATSIWQFLALRAVLGLLGGFVPNANALIATQVPRNKSGWALG 146
>sp|Q1LTM2|MDTH_BAUCH Multidrug resistance protein MdtH OS=Baumannia cicadellinicola
subsp. Homalodisca coagulata GN=mdtH PE=3 SV=2
Length = 411
Score = 33.9 bits (76), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 423 GCLMNVLGAKHTIIIGLVFEMLQLMWYGFGSQMWMMWAAGILASLASITY-PAISALV 479
G + LGAK II G++ L ++ G + W++W + IL++L + P +ALV
Sbjct: 67 GAFADKLGAKPMIITGMLMRALGFIFMGIADKPWLLWVSCILSALGGTLFDPPRTALV 124
>sp|Q7ZWG6|PCFT_DANRE Proton-coupled folate transporter OS=Danio rerio GN=slc46a1 PE=2
SV=1
Length = 481
Score = 33.5 bits (75), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 15/79 (18%)
Query: 153 LIGALSDLWGRKLFLLI---------TVFVTCLPIPLMTLDTWWFFA---MISISGVFAV 200
L+G+ SD GR+L L+I V++T + + L +WF +SG F
Sbjct: 123 LLGSWSDRAGRRLVLIIPSLGLAVQAAVYLT---VMYLKLPVFWFLIGRICSGLSGDFNA 179
Query: 201 TFSVVFAYVADVTEEHERS 219
+ FAYVAD +E R+
Sbjct: 180 ILAGCFAYVADTSERGSRT 198
>sp|Q14728|MFS10_HUMAN Major facilitator superfamily domain-containing protein 10 OS=Homo
sapiens GN=MFSD10 PE=2 SV=1
Length = 455
Score = 33.5 bits (75), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Query: 131 HTFLMNGLIMGIKGFLSFLSAPLIGALSDLWGRKLFLLITVF--VTCLPIPLMTLDTWWF 188
++ L GLI L FL APL GA SD GR+ +L+ + T + + F
Sbjct: 84 NSVLFGGLIGSAFSVLQFLCAPLTGATSDCLGRRPVMLLCLMGVATSYAVWATSRSFAAF 143
Query: 189 FAMISISGVFAVTFSVVFAYVADVTEEHERS 219
A I G+ S+ A VAD+ RS
Sbjct: 144 LASRLIGGISKGNVSLSTAIVADLGSPLARS 174
>sp|Q7N568|MDTH_PHOLL Multidrug resistance protein MdtH OS=Photorhabdus luminescens
subsp. laumondii (strain TT01) GN=mdtH PE=3 SV=1
Length = 401
Score = 33.5 bits (75), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 18/124 (14%)
Query: 384 GQYSCLFVYLKLVMGFDEVHVAVFIAVIGTLSVSAQIIL-----------------GCLM 426
G+Y LF L +V+GF V + I + L +A ++ G +
Sbjct: 11 GKYFLLFDNLLVVLGFFVVFPLISIHFVEQLGWAALVVGFALGLRQFVQQGLGIFGGAIA 70
Query: 427 NVLGAKHTIIIGLVFEMLQLMWYGFGSQMWMMWAAGILASLASITY-PAISALVSMHSDA 485
+ GAK I+ G++ L + ++ W++W A IL++L + P +ALV +
Sbjct: 71 DRFGAKPMIVTGMLLRALGFAFIALATEPWILWLACILSALGGTLFDPPRTALVIKLTRP 130
Query: 486 DRQG 489
+G
Sbjct: 131 HERG 134
>sp|O74852|YQ92_SCHPO Uncharacterized MFS-type transporter C18.02 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC18.02 PE=3 SV=1
Length = 448
Score = 32.7 bits (73), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 12/103 (11%)
Query: 126 RTFPDHTFLMNGLIMGIKGFLSFLSAPLIGALSDLWGRKLF-------LLITVFVTCLPI 178
+T D L GL+ G+ F GA+ D G + L T+F+ C+P
Sbjct: 276 KTLFDFNSLQCGLMFGVLSTPYFFCGAWAGAMVDRRGSRTIGKRAYAILGCTLFLLCIPR 335
Query: 179 PLMTLDTWWFFAMISISG-VFAVTFSVVFA----YVADVTEEH 216
+L+ + F A ++I+G V A T S F YVA+ EH
Sbjct: 336 TNTSLNIYLFSAFLAINGVVLAFTSSPGFVQSSHYVAEYELEH 378
>sp|A8GCZ5|MDTG_SERP5 Multidrug resistance protein MdtG OS=Serratia proteamaculans
(strain 568) GN=mdtG PE=3 SV=1
Length = 411
Score = 32.7 bits (73), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 136 NGLIMGIKGFLSFLSAPLIGALSDLWGRKLFLLITVFVTCLPIPLMTL--DTWWFFAMIS 193
+GL+ I S +++P G L+D GRKL LL + + + LM + + W F A+ +
Sbjct: 54 SGLVFSITFLFSAIASPFWGGLADRRGRKLMLLRSALGMSIVMLLMGMAQNIWQFLALRA 113
Query: 194 ISGVFAVTFSVVFAYVADVTEEHERSLAYG 223
+ G+ A +A + A G
Sbjct: 114 VLGLLGGFIPNANALIATQVPRNRSGWALG 143
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.139 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 198,704,747
Number of Sequences: 539616
Number of extensions: 8088861
Number of successful extensions: 24794
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 210
Number of HSP's that attempted gapping in prelim test: 24526
Number of HSP's gapped (non-prelim): 431
length of query: 594
length of database: 191,569,459
effective HSP length: 123
effective length of query: 471
effective length of database: 125,196,691
effective search space: 58967641461
effective search space used: 58967641461
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 64 (29.3 bits)