RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy1667
         (143 letters)



>d2pu9b1 b.34.4.3 (B:1-73) Ferredoxin thioredoxin reductase (FTR),
          alpha (variable) chain {Synechocystis sp. [TaxId:
          1143]}
          Length = 73

 Score = 23.1 bits (50), Expect = 6.3
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 66 ELNAQVNDLRGKFIKPTLKKVSKYENKF 93
          E+ A + + +G+ I   L  + K+E +F
Sbjct: 34 EVAAVLTEWQGRPISANLPVLVKFEQRF 61


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.311    0.129    0.359 

Gapped
Lambda     K      H
   0.267   0.0622    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 538,713
Number of extensions: 24102
Number of successful extensions: 69
Number of sequences better than 10.0: 1
Number of HSP's gapped: 68
Number of HSP's successfully gapped: 32
Length of query: 143
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 66
Effective length of database: 1,350,386
Effective search space: 89125476
Effective search space used: 89125476
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 48 (22.5 bits)