RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16673
(373 letters)
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 58.7 bits (141), Expect = 4e-11
Identities = 34/152 (22%), Positives = 55/152 (36%), Gaps = 13/152 (8%)
Query: 192 IREQRQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQFPAMRRLSIATAHAFL 251
R F + G + + +R + I DT G ++ + A F+
Sbjct: 23 FRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFI 82
Query: 252 LVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVK 311
L+Y T ESF +V+ + +I+ D LLV + +E + V
Sbjct: 83 LMYDITNEESFNAVQDWSTQIKTYSWDN-------------AQVLLVGNKCDMEDERVVS 129
Query: 312 CYFEEIREQRQDFQLLECSAKDNYNIKEVFRT 343
F+ E SAKDN N+K+ F
Sbjct: 130 SERGRQLADHLGFEFFEASAKDNINVKQTFER 161
Score = 41.0 bits (95), Expect = 5e-05
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 145 VDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQEIPI 204
+ I DT G ++ + A F+L+Y T ESF +V+ + +I+ D ++ +
Sbjct: 56 LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLL 115
Query: 205 VVAGNKSDMTSHHRAVHLEDVDILDTCG 232
V GNK DM + D G
Sbjct: 116 V--GNKCDMEDERVVSSERGRQLADHLG 141
Score = 38.3 bits (88), Expect = 5e-04
Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 8/124 (6%)
Query: 12 RLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDL-YSRDFHVGAVTIKEIPIVVAG--- 67
+++I+G VGK+ L R+ ++++ + STV + + IK AG
Sbjct: 7 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQER 66
Query: 68 ----NKSDMTSHHRAVHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHH 123
+ + + D++ + + D +++ GNK DM
Sbjct: 67 YRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDER 126
Query: 124 RAVH 127
Sbjct: 127 VVSS 130
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 58.6 bits (141), Expect = 5e-11
Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 13/119 (10%)
Query: 225 VDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQFPAM 284
+ I DT G +F + A +LVY T +SF +++ + I E
Sbjct: 57 LQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASA------ 110
Query: 285 RRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQLLECSAKDNYNIKEVFRT 343
+++ + + + V E + +E SAK N N++ F T
Sbjct: 111 -------DVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFT 162
Score = 46.3 bits (109), Expect = 1e-06
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 145 VDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQEIPI 204
+ I DT G +F + A +LVY T +SF +++ + I ++
Sbjct: 57 LQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE--EHASADVEK 114
Query: 205 VVAGNKSDMTSHHRAVHLEDVDILDTCGDLQF 236
++ GNK D+ R V E + L ++F
Sbjct: 115 MILGNKCDVN-DKRQVSKERGEKLALDYGIKF 145
Score = 43.2 bits (101), Expect = 9e-06
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVE-DLYSRDFHVGAVTIK 59
+L+++G GVGK+C+L RF + ++ + ST+ D R + IK
Sbjct: 7 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIK 56
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 57.6 bits (138), Expect = 1e-10
Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGN-- 68
++V+LG GVGKS + +F+ T+ ++Y T+ED Y ++ V + + AG
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQ 63
Query: 69 ------KSDMTSHHRAVHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSH 122
+ V++ + ++ +R I +++P+++ GNK D+ S
Sbjct: 64 FASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESE 123
Query: 123 HRAVHLE 129
E
Sbjct: 124 REVSSSE 130
Score = 43.4 bits (101), Expect = 1e-05
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 12/115 (10%)
Query: 229 DTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRLS 288
DT G QF +MR L I F+LVYS +SFQ +K ++I ++ + P
Sbjct: 57 DTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVP------ 110
Query: 289 IATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQLLECSAKDNYNIKEVFRT 343
+LV + LES + V + +E SAK + E+F
Sbjct: 111 ------VILVGNKVDLESEREVSSSEGRALAEEWGCPFMETSAKSKTMVDELFAE 159
Score = 41.1 bits (95), Expect = 6e-05
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 127 HLEDVSEWLYCELPKLRYVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVK 186
+ED ++ILDT G QF +MR L I F+LVYS +SFQ +K
Sbjct: 35 TIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIK 94
Query: 187 CYFEEIREQRQDFQEIPIVVAGNKSDMTSHHRAVHLE 223
++I + ++++P+++ GNK D+ S E
Sbjct: 95 PMRDQIIRVK-RYEKVPVILVGNKVDLESEREVSSSE 130
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 54.8 bits (131), Expect = 1e-09
Identities = 33/168 (19%), Positives = 55/168 (32%), Gaps = 26/168 (15%)
Query: 176 TTCLESFQSVKCYFEEIREQRQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQ 235
+ L F K I DF+ + + G K + I DT G +
Sbjct: 16 SCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKL------------QIWDTAGQER 63
Query: 236 FPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRLSIATAHAF 295
F + A +LVY T +F ++K +F+ + E D +
Sbjct: 64 FRTITTAYYRGAMGIILVYDITDERTFTNIKQWFKTVNEHANDEAQLLL----------- 112
Query: 296 LLVYSTTCLESFQSVKCYFEEIREQRQDFQLLECSAKDNYNIKEVFRT 343
+ V E + +E SAK++ N+ E+F T
Sbjct: 113 ---VGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFT 157
Score = 44.4 bits (104), Expect = 4e-06
Identities = 13/50 (26%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVE-DLYSRDFHVGAVTIK 59
++++++G GVGKSC+L RF+ + ++ + +T+ D + + +K
Sbjct: 3 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVK 52
Score = 41.7 bits (97), Expect = 3e-05
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 145 VDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQEIPI 204
+ I DT G +F + A +LVY T +F ++K +F+ + E D ++ +
Sbjct: 53 LQIWDTAGQERFRTITTAYYRGAMGIILVYDITDERTFTNIKQWFKTVNEHANDEAQLLL 112
Query: 205 V 205
V
Sbjct: 113 V 113
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 54.9 bits (131), Expect = 1e-09
Identities = 36/151 (23%), Positives = 58/151 (38%), Gaps = 16/151 (10%)
Query: 225 VDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQFPAM 284
+ I DT G +F + +H ++VY T ESF VK + +EI
Sbjct: 57 LQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVL--- 113
Query: 285 RRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQLLECSAKDNYNIKEVFRTF 344
LLV + L+ + V+ + LE SA D+ N+++ F T
Sbjct: 114 ----------KLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTM 163
Query: 345 LT--LSQILTTNGDENSLKRRSSAYVN-KGK 372
+ N +E + K+ VN KG+
Sbjct: 164 ARQIKESMSQQNLNETTQKKEDKGNVNLKGQ 194
Score = 51.4 bits (122), Expect = 2e-08
Identities = 31/151 (20%), Positives = 62/151 (41%), Gaps = 11/151 (7%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLY-SRDFHVGAVTIKEIPIVVAGNK 69
+L+++G GVGKSC+L RF +TY++ Y ST+ + + + T+K AG +
Sbjct: 7 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQE 66
Query: 70 --SDMTSH-----HRAVHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSH 122
+TS H + + DV++ K+ + ++ GNK D+
Sbjct: 67 RFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDK 126
Query: 123 HRAVHLEDVSEWLYCELPKLRYVDILDTCGD 153
+ + + K+ +++
Sbjct: 127 RVVEYDVA---KEFADANKMPFLETSALDST 154
Score = 47.2 bits (111), Expect = 6e-07
Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Query: 145 VDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQEIPI 204
+ I DT G +F + +H ++VY T ESF VK + +EI +
Sbjct: 57 LQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATST--VLK 114
Query: 205 VVAGNKSDMTSHHRAVHLEDVDILDTCGDLQF 236
++ GNK D+ + + D
Sbjct: 115 LLVGNKCDLKDKRVVEYDVAKEFADANKMPFL 146
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 54.2 bits (129), Expect = 1e-09
Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 12 RLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGNKSD 71
+LV++G GVGKS + + + N + D Y T+ED Y + + T + AG +
Sbjct: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEY 64
Query: 72 MTSHHRAVHLEDVSEWLYC--------ELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHH 123
+ + + ++ ++ + R I+ D++P+V+ GNK D+ +
Sbjct: 65 SAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAART 124
Score = 40.7 bits (94), Expect = 8e-05
Identities = 29/144 (20%), Positives = 57/144 (39%), Gaps = 16/144 (11%)
Query: 200 QEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCL 259
+ P + + + L DILDT G ++ AMR + T FL V++
Sbjct: 31 EYDPTIEDSYRKQVVIDGETCLL---DILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNT 87
Query: 260 ESFQSVKCYFEEIREQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIRE 319
+SF+ + Y E+I+ + P +++ C + ++V+ +
Sbjct: 88 KSFEDIHQYREQIKRVKDSDDVP-------------MVLVGNKCDLAARTVESRQAQDLA 134
Query: 320 QRQDFQLLECSAKDNYNIKEVFRT 343
+ +E SAK +++ F T
Sbjct: 135 RSYGIPYIETSAKTRQGVEDAFYT 158
Score = 38.8 bits (89), Expect = 3e-04
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 127 HLEDVSEWLYCELPKLRYVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVK 186
+ED + +DILDT G ++ AMR + T FL V++ +SF+ +
Sbjct: 35 TIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIH 94
Query: 187 CYFEEIREQRQDFQEIPIVVAGNKSDMTSHH 217
Y E+I+ + D ++P+V+ GNK D+ +
Sbjct: 95 QYREQIKRVK-DSDDVPMVLVGNKCDLAART 124
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 54.6 bits (130), Expect = 2e-09
Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 7/136 (5%)
Query: 9 ERIRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVA-- 66
+ I+ V++G VGK+C+L + N + Y TV D YS + V + A
Sbjct: 4 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQ 63
Query: 67 -----GNKSDMTSHHRAVHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTS 121
++ + E + ++ + PI++ G K D+
Sbjct: 64 EDYDRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRD 123
Query: 122 HHRAVHLEDVSEWLYC 137
+ +
Sbjct: 124 DKDTIEKLKEKKLTPI 139
Score = 37.3 bits (85), Expect = 0.001
Identities = 19/128 (14%), Positives = 39/128 (30%)
Query: 216 HHRAVHLEDVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQ 275
++ + DT G + +R LS L+ +S SF++V+ +
Sbjct: 46 VMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEVRH 105
Query: 276 RQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQLLECSAKDNY 335
+ + + + + ++ + LECSA
Sbjct: 106 HCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQR 165
Query: 336 NIKEVFRT 343
+K VF
Sbjct: 166 GLKTVFDE 173
Score = 33.8 bits (76), Expect = 0.019
Identities = 25/146 (17%), Positives = 50/146 (34%), Gaps = 8/146 (5%)
Query: 127 HLEDVSEWLYCELPKLRYVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVK 186
+ D K + + DT G + +R LS L+ +S SF++V+
Sbjct: 37 TVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVSLICFSLVSPASFENVR 96
Query: 187 CYFEEIREQRQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQFPAMRRLSIAT 246
+ PI++ G K D+ + ++ L + L++A
Sbjct: 97 AKWYPEVRHHCP--NTPIILVGTKLDLRDDK-----DTIEKLKEKKLTPITYPQGLAMAK 149
Query: 247 AHAFLLVYSTTCLESFQSVKCYFEEI 272
+ + L + +K F+E
Sbjct: 150 EIGAVKYLECSALTQ-RGLKTVFDEA 174
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 53.8 bits (128), Expect = 2e-09
Identities = 33/152 (21%), Positives = 57/152 (37%), Gaps = 13/152 (8%)
Query: 192 IREQRQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQFPAMRRLSIATAHAFL 251
+R F + I G + ++ I DT G +F A+ + ++ +
Sbjct: 21 LRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAI 80
Query: 252 LVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVK 311
LVY T +SFQ VK + +E+R+ + +V + LE + V
Sbjct: 81 LVYDITDEDSFQKVKNWVKELRKMLGNE-------------ICLCIVGNKIDLEKERHVS 127
Query: 312 CYFEEIREQRQDFQLLECSAKDNYNIKEVFRT 343
E + + SAK N I+E+F
Sbjct: 128 IQEAESYAESVGAKHYHTSAKQNKGIEELFLD 159
Score = 38.8 bits (89), Expect = 4e-04
Identities = 9/28 (32%), Positives = 20/28 (71%)
Query: 12 RLVILGGQGVGKSCILKRFLFNTYSDRY 39
++V+LG VGK+ ++ R+ N ++D++
Sbjct: 5 KVVLLGEGCVGKTSLVLRYCENKFNDKH 32
Score = 34.5 bits (78), Expect = 0.009
Identities = 23/105 (21%), Positives = 38/105 (36%)
Query: 120 TSHHRAVHLEDVSEWLYCELPKLRYVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCL 179
H K + I DT G +F A+ + ++ +LVY T
Sbjct: 29 NDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDE 88
Query: 180 ESFQSVKCYFEEIREQRQDFQEIPIVVAGNKSDMTSHHRAVHLED 224
+SFQ VK + +E+R+ + + IV + H E
Sbjct: 89 DSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 133
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 53.9 bits (128), Expect = 3e-09
Identities = 25/135 (18%), Positives = 46/135 (34%), Gaps = 7/135 (5%)
Query: 10 RIRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGN- 68
R +LVI+G GK+C+L + + + Y TV + Y D V ++ AG
Sbjct: 2 RKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGLE 61
Query: 69 ------KSDMTSHHRAVHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSH 122
+ + E ++ + F +PI++ GNK D+ +
Sbjct: 62 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 121
Query: 123 HRAVHLEDVSEWLYC 137
+
Sbjct: 122 EHTRRELAKMKQEPV 136
Score = 38.8 bits (89), Expect = 3e-04
Identities = 18/131 (13%), Positives = 42/131 (32%)
Query: 213 MTSHHRAVHLEDVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEI 272
+ ++ + DT G + +R LS L+ +S +S +++ +
Sbjct: 40 VADIEVDGKQVELALWDTAGLEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPE 99
Query: 273 REQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQLLECSAK 332
+ + + ++ ++ + F +ECSAK
Sbjct: 100 VKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAK 159
Query: 333 DNYNIKEVFRT 343
++EVF
Sbjct: 160 TKDGVREVFEM 170
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 54.2 bits (129), Expect = 3e-09
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 7/136 (5%)
Query: 9 ERIRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVED-------LYSRDFHVGAVTIKEI 61
+ I+ V++G VGK+C+L + N + Y TV D + + +G
Sbjct: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61
Query: 62 PIVVAGNKSDMTSHHRAVHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTS 121
+ V E K ++V + + + P ++ G + D+
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121
Query: 122 HHRAVHLEDVSEWLYC 137
+ ++
Sbjct: 122 DPSTIEKLAKNKQKPI 137
Score = 37.7 bits (86), Expect = 0.001
Identities = 21/114 (18%), Positives = 37/114 (32%)
Query: 230 TCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRLSI 289
T G + +R LS FL+ +S SF++VK + + I
Sbjct: 58 TAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQI 117
Query: 290 ATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQLLECSAKDNYNIKEVFRT 343
+ + E++ + + +ECSA +K VF
Sbjct: 118 DLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDE 171
Score = 31.9 bits (71), Expect = 0.067
Identities = 17/93 (18%), Positives = 34/93 (36%), Gaps = 2/93 (2%)
Query: 128 LEDVSEWLYCELPKLRYVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKC 187
+ D + + + DT G + +R LS FL+ +S SF++VK
Sbjct: 36 VFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKE 95
Query: 188 YFEEIREQRQDFQEIPIVVAGNKSDMTSHHRAV 220
+ + P ++ G + D+ +
Sbjct: 96 KWVPEITHHCP--KTPFLLVGTQIDLRDDPSTI 126
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 53.7 bits (128), Expect = 3e-09
Identities = 24/164 (14%), Positives = 49/164 (29%), Gaps = 15/164 (9%)
Query: 192 IREQRQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQFPAMRRLSIATAHAFL 251
+R F G + + + + I DT G +F + A +
Sbjct: 25 LRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVI 84
Query: 252 LVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVK 311
LVY T ++F + + E+ ++ + + V
Sbjct: 85 LVYDVTRRDTFVKLDNWLNELETYCTRN-------------DIVNMLVGNKIDKENREVD 131
Query: 312 CYFEEIREQRQDFQLLECSAKDNYNIKEVFRTFLTLSQILTTNG 355
++ +E SAK ++ F + +I+ T G
Sbjct: 132 RNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVE--KIIQTPG 173
Score = 40.6 bits (94), Expect = 9e-05
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVE-DLYSRDFHVGAVTIKEIPIVVAG 67
++++I+G GVGKS +L RF +T+ +T+ D + V K AG
Sbjct: 8 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 65
Score = 35.6 bits (81), Expect = 0.004
Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 3/92 (3%)
Query: 145 VDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQEIPI 204
+ I DT G +F + A +LVY T ++F + + E+ + +
Sbjct: 58 LAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNM 117
Query: 205 VVAGNKSDMTSHHRAVHLEDVDILDTCGDLQF 236
+V + + +R V + + F
Sbjct: 118 LV---GNKIDKENREVDRNEGLKFARKHSMLF 146
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 53.5 bits (127), Expect = 4e-09
Identities = 20/117 (17%), Positives = 46/117 (39%), Gaps = 7/117 (5%)
Query: 10 RIRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGNK 69
+ ++V++G GK+ +L F + + + Y TV + Y+ F + I+ +G+
Sbjct: 2 KCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSP 61
Query: 70 SDMTSH-------HRAVHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDM 119
+ D+S + ++ + F +++ G KSD+
Sbjct: 62 YYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDL 118
Score = 32.7 bits (73), Expect = 0.041
Identities = 18/109 (16%), Positives = 42/109 (38%), Gaps = 7/109 (6%)
Query: 239 MRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRLSIATAHAFLLV 298
+R LS + A L+ + + E+ SV ++ ++ L + V
Sbjct: 66 VRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPN---TKMLLVGCKSDLRTDV 122
Query: 299 YSTTCLESFQSVKCYFEEIR---EQRQDFQLLECSAKDNYN-IKEVFRT 343
+ L + + +++ +Q +ECSA + N ++++F
Sbjct: 123 STLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHV 171
Score = 28.1 bits (61), Expect = 1.2
Identities = 24/143 (16%), Positives = 49/143 (34%), Gaps = 7/143 (4%)
Query: 130 DVSEWLYCELPKLRYVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYF 189
+ + + + + DT G + +R LS + A L+ + + E+ SV +
Sbjct: 37 ENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKW 96
Query: 190 EEIREQRQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQFPAMRRLSIATAHA 249
+ ++ ++ +V G KSD+ + + Q M A
Sbjct: 97 KGEIQEFCPNTKMLLV--GCKSDLRTDVSTLVELSNHRQTPVSYDQGANM-----AKQIG 149
Query: 250 FLLVYSTTCLESFQSVKCYFEEI 272
+ L+S SV+ F
Sbjct: 150 AATYIECSALQSENSVRDIFHVA 172
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 53.3 bits (127), Expect = 4e-09
Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 13/119 (10%)
Query: 225 VDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQFPAM 284
+ + DT G +F ++ AHA LL+Y T SF +++ + EI E Q
Sbjct: 58 LQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHD----- 112
Query: 285 RRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQLLECSAKDNYNIKEVFRT 343
A +L+ + + VK E + +E SAK N+ F
Sbjct: 113 --------VALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTA 163
Score = 40.6 bits (94), Expect = 8e-05
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 145 VDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQEIPI 204
+ + DT G +F ++ AHA LL+Y T SF +++ + EI E Q + +
Sbjct: 58 LQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALML 117
Query: 205 VVAGNKSDMTSHHRAVHLEDVDILDTCGDLQF 236
+ ++H R V ED + L L F
Sbjct: 118 L---GNKVDSAHERVVKREDGEKLAKEYGLPF 146
Score = 36.4 bits (83), Expect = 0.002
Identities = 10/42 (23%), Positives = 22/42 (52%)
Query: 12 RLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHV 53
+++++G GVGK+C+L RF + + + R+ +
Sbjct: 8 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVL 49
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 53.1 bits (126), Expect = 4e-09
Identities = 28/145 (19%), Positives = 59/145 (40%), Gaps = 10/145 (6%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGNKS 70
+LV+LG GVGKS + +F+ + ++Y T+ED Y + V + AG +
Sbjct: 4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQ 63
Query: 71 DMTSHHRAVHLEDV--------SEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSH 122
+ ++ + +L LR I +++P+++ GNK D+
Sbjct: 64 FTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDE 123
Query: 123 HRAVHLEDVSEWLYCELPKLRYVDI 147
++ + L + +++
Sbjct: 124 RV--VGKEQGQNLARQWCNCAFLES 146
Score = 41.9 bits (97), Expect = 3e-05
Identities = 31/116 (26%), Positives = 45/116 (38%), Gaps = 11/116 (9%)
Query: 228 LDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRL 287
LDT G QF AMR L + F LVYS T +F ++ E+I + P +
Sbjct: 56 LDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMI--- 112
Query: 288 SIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQLLECSAKDNYNIKEVFRT 343
L+ + K + + Q + LE SAK N+ E+F
Sbjct: 113 --------LVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYD 160
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 53.0 bits (126), Expect = 5e-09
Identities = 24/144 (16%), Positives = 53/144 (36%), Gaps = 11/144 (7%)
Query: 12 RLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGNKSD 71
+++++G GVGKS + +F+++ + + Y T D Y + + ++ + AG +
Sbjct: 6 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDY 65
Query: 72 MTSHHRAVHLEDV--------SEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHH 123
+ + R I + +P ++ GNKSD+
Sbjct: 66 AAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKR 125
Query: 124 RAVHLEDVSEWLYCELPKLRYVDI 147
+ E + + YV+
Sbjct: 126 QVSVEEA---KNRADQWNVNYVET 146
Score = 48.8 bits (115), Expect = 1e-07
Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 12/131 (9%)
Query: 213 MTSHHRAVHLEDVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEI 272
+DILDT G + A+R + FL V+S T +ESF + + E+I
Sbjct: 42 RKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQI 101
Query: 273 REQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQLLECSAK 332
++D P FLLV + + LE + V + R + + +E SAK
Sbjct: 102 LRVKEDENVP------------FLLVGNKSDLEDKRQVSVEEAKNRADQWNVNYVETSAK 149
Query: 333 DNYNIKEVFRT 343
N+ +VF
Sbjct: 150 TRANVDKVFFD 160
Score = 41.5 bits (96), Expect = 4e-05
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 127 HLEDVSEWLYCELPKLRYVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVK 186
D + +DILDT G + A+R + FL V+S T +ESF +
Sbjct: 36 TKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATA 95
Query: 187 CYFEEIREQRQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCG 232
+ E+I ++D + +P ++ GNKSD+ + E + D
Sbjct: 96 DFREQILRVKED-ENVPFLLVGNKSDLEDKRQVSVEEAKNRADQWN 140
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 52.6 bits (125), Expect = 7e-09
Identities = 27/152 (17%), Positives = 51/152 (33%), Gaps = 13/152 (8%)
Query: 192 IREQRQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQFPAMRRLSIATAHAFL 251
+ + F++ G + + + I DT G +F ++ R A L
Sbjct: 23 HQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGAL 82
Query: 252 LVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVK 311
LVY T E++ ++ + + R +L + L++ + V
Sbjct: 83 LVYDITSRETYNALTNWLTDARMLASQN-------------IVIILCGNKKDLDADREVT 129
Query: 312 CYFEEIREQRQDFQLLECSAKDNYNIKEVFRT 343
Q + LE SA N++E F
Sbjct: 130 FLEASRFAQENELMFLETSALTGENVEEAFVQ 161
Score = 41.4 bits (96), Expect = 5e-05
Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 8/120 (6%)
Query: 12 RLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGNKSD 71
+ +++G G GKSC+L +F+ + D T+ + ++ I +
Sbjct: 7 KFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQER 66
Query: 72 MTSHHR--------AVHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHH 123
S R A+ + D++ I I++ GNK D+ +
Sbjct: 67 FRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADR 126
Score = 37.6 bits (86), Expect = 8e-04
Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 2/98 (2%)
Query: 120 TSHHRAVHLEDVSEWLYCELPKLRYVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCL 179
+ + K + I DT G +F ++ R A LLVY T
Sbjct: 31 KDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSR 90
Query: 180 ESFQSVKCYFEEIREQRQDFQEIPIVVAGNKSDMTSHH 217
E++ ++ + + R I I++ GNK D+ +
Sbjct: 91 ETYNALTNWLTDARMLASQN--IVIILCGNKKDLDADR 126
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 52.5 bits (125), Expect = 7e-09
Identities = 38/168 (22%), Positives = 65/168 (38%), Gaps = 25/168 (14%)
Query: 176 TTCLESFQSVKCYFEEIREQRQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQ 235
T + F + DF + + G K V L+ I DT G +
Sbjct: 19 TCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEK---------VKLQ---IWDTAGQER 66
Query: 236 FPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRLSIATAHAF 295
F ++ + +A+A +L Y TC ESF+ + + EI + +
Sbjct: 67 FRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNK-------------VIT 113
Query: 296 LLVYSTTCLESFQSVKCYFEEIREQRQDFQLLECSAKDNYNIKEVFRT 343
+LV + L + V E + QD LE SAK++ N++++F
Sbjct: 114 VLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLD 161
Score = 44.0 bits (103), Expect = 6e-06
Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTV-EDLYSRDFHVGAVTIK 59
++V++G GVGK+C+++RF + +T+ D + + +K
Sbjct: 6 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVK 55
Score = 34.0 bits (77), Expect = 0.013
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 145 VDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQEIPI 204
+ I DT G +F ++ + +A+A +L Y TC ESF+ + + EI + + +
Sbjct: 56 LQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNK--VIT 113
Query: 205 VVAGNKSDMTSHH 217
V+ GNK D+
Sbjct: 114 VLVGNKIDLAERR 126
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 52.3 bits (124), Expect = 1e-08
Identities = 21/134 (15%), Positives = 46/134 (34%), Gaps = 7/134 (5%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVA---- 66
++ V++G VGK+C+L + + + + Y TV D Y+ VG A
Sbjct: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 69
Query: 67 ---GNKSDMTSHHRAVHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHH 123
+ V + K +V + + +P ++ G + D+
Sbjct: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDP 129
Query: 124 RAVHLEDVSEWLYC 137
+ + + +
Sbjct: 130 KTLARLNDMKEKPI 143
Score = 38.8 bits (89), Expect = 4e-04
Identities = 22/118 (18%), Positives = 42/118 (35%), Gaps = 2/118 (1%)
Query: 235 QFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRLSIATAHA 294
+ +R LS FL+ +S SFQ+VK + ++ + I
Sbjct: 69 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDD 128
Query: 295 FLLVYSTTCLESFQSVKCYFEEIREQRQDFQLLECSAKDNYNIKEVFRTFLTLSQILT 352
+ ++ +++ ++ +ECSA +K VF + ILT
Sbjct: 129 PKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAII--AILT 184
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 51.9 bits (123), Expect = 1e-08
Identities = 29/149 (19%), Positives = 51/149 (34%), Gaps = 13/149 (8%)
Query: 8 NERIRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAG 67
N+ R+ + G GVGKS ++ RF+ T+ + Y TVED Y + G
Sbjct: 1 ND-YRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTG 59
Query: 68 NKSDMTSHHRAVHLEDV---------SEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSD 118
+ ++ + L P + + + IPI++ GNK D
Sbjct: 60 SHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCD 119
Query: 119 MTSHHRAVHLEDVSEWLYCELPKLRYVDI 147
+ E K +++
Sbjct: 120 ESPSREVQSSEA---EALARTWKCAFMET 145
Score = 40.4 bits (93), Expect = 9e-05
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Query: 231 CGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRLSIA 290
G QFPAM+RLSI+ HAF+LVYS T +S + +K +E+I E + D +
Sbjct: 58 TGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVE---------- 107
Query: 291 TAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQLLECSAKDNYNIKEVFRTFLTL 347
+ +LV + + V+ E + +E SAK N+N+KE+F+ L L
Sbjct: 108 -SIPIMLVGNKCDESPSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNL 163
Score = 34.2 bits (77), Expect = 0.012
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 134 WLYCELPKLRYVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIR 193
+ + + I DT G QFPAM+RLSI+ HAF+LVYS T +S + +K +E+I
Sbjct: 41 QVISCDKSICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQIC 100
Query: 194 EQRQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCG 232
E + D + IPI++ GNK D + E + T
Sbjct: 101 EIKGDVESIPIMLVGNKCDESPSREVQSSEAEALARTWK 139
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 51.4 bits (122), Expect = 2e-08
Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 8/137 (5%)
Query: 12 RLVILGGQGVGKSCILKRFLFNTYSDRYRSTVED-LYSRDFHVGAVTIKEIPIVVAG--- 67
++V++G GVGKS +L RF N ++ +ST+ +R V TIK AG
Sbjct: 6 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 65
Query: 68 ----NKSDMTSHHRAVHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHH 123
+ A+ + D+++ L E + I I++ GNKSD+
Sbjct: 66 YRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 125
Query: 124 RAVHLEDVSEWLYCELP 140
E + L
Sbjct: 126 AVPTDEARAFAEKNNLS 142
Score = 46.8 bits (110), Expect = 6e-07
Identities = 30/155 (19%), Positives = 57/155 (36%), Gaps = 13/155 (8%)
Query: 192 IREQRQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQFPAMRRLSIATAHAFL 251
R R +F G + S I DT G ++ + A L
Sbjct: 22 SRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRRITSAYYRGAVGAL 81
Query: 252 LVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVK 311
LVY ++++V+ + +E+R+ +LV + + L ++V
Sbjct: 82 LVYDIAKHLTYENVERWLKELRDHADS-NIV------------IMLVGNKSDLRHLRAVP 128
Query: 312 CYFEEIREQRQDFQLLECSAKDNYNIKEVFRTFLT 346
++ + +E SA D+ N++E F+ LT
Sbjct: 129 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 163
Score = 43.7 bits (102), Expect = 8e-06
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 141 KLRYVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQ 200
K I DT G ++ + A LLVY ++++V+ + +E+R+
Sbjct: 51 KTIKAQIWDTAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADS-- 108
Query: 201 EIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQF 236
I I++ GNKSD+ H RAV ++ +L F
Sbjct: 109 NIVIMLVGNKSDLR-HLRAVPTDEARAFAEKNNLSF 143
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 50.0 bits (118), Expect = 5e-08
Identities = 29/152 (19%), Positives = 53/152 (34%), Gaps = 13/152 (8%)
Query: 192 IREQRQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQFPAMRRLSIATAHAFL 251
+R + F E G + +I DT G ++ ++ + A A +
Sbjct: 24 LRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAI 83
Query: 252 LVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVK 311
+VY T ESF K + +E++ Q L + L + ++V
Sbjct: 84 VVYDITNEESFARAKNWVKELQRQASPN-------------IVIALSGNKADLANKRAVD 130
Query: 312 CYFEEIREQRQDFQLLECSAKDNYNIKEVFRT 343
+ +E SAK + N+ E+F
Sbjct: 131 FQEAQSYADDNSLLFMETSAKTSMNVNEIFMA 162
Score = 41.9 bits (97), Expect = 3e-05
Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 8/126 (6%)
Query: 12 RLVILGGQGVGKSCILKRFLFNTYSDRYRSTVE-DLYSRDFHVGAVTIKEIPIVVAGN-- 68
+LV+LG VGKS ++ RF+ + + ST+ ++ + T+K AG
Sbjct: 8 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 67
Query: 69 -----KSDMTSHHRAVHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHH 123
A+ + D++ K I I ++GNK+D+ +
Sbjct: 68 YHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKR 127
Query: 124 RAVHLE 129
E
Sbjct: 128 AVDFQE 133
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 49.9 bits (118), Expect = 5e-08
Identities = 33/152 (21%), Positives = 57/152 (37%), Gaps = 13/152 (8%)
Query: 192 IREQRQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQFPAMRRLSIATAHAFL 251
++ + FQ + + G + + + I DT G F ++ R A L
Sbjct: 21 LQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGAL 80
Query: 252 LVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVK 311
LVY T E+F + + E+ R+ +L+ + + LES + VK
Sbjct: 81 LVYDITRRETFNHLTSWLEDARQHSSS-------------NMVIMLIGNKSDLESRRDVK 127
Query: 312 CYFEEIREQRQDFQLLECSAKDNYNIKEVFRT 343
E + +E SAK N++E F
Sbjct: 128 REEGEAFAREHGLIFMETSAKTACNVEEAFIN 159
Score = 46.4 bits (109), Expect = 1e-06
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 8/120 (6%)
Query: 12 RLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGNKSD 71
+ +I+G GVGKSC+L +F + + T+ + ++ I +
Sbjct: 5 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQES 64
Query: 72 MTSHHRAVHLEDVSEWLYCELPKLRYVIQSSSF--------GDEIPIVVAGNKSDMTSHH 123
S R+ + L ++ + +S+ + I++ GNKSD+ S
Sbjct: 65 FRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRR 124
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 49.9 bits (118), Expect = 6e-08
Identities = 29/172 (16%), Positives = 57/172 (33%), Gaps = 14/172 (8%)
Query: 176 TTCLESFQSVKCYFEEIREQRQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQ 235
TT L + + + VV + S +A + + + DT G +
Sbjct: 19 TTFLYRYTD-NKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH-LQLWDTAGQER 76
Query: 236 FPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRLSIATAHAF 295
F ++ A FLL++ T +SF +V+ + +++ +
Sbjct: 77 FRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV----------- 125
Query: 296 LLVYSTTCLESFQSVKCYFEEIREQRQDFQLLECSAKDNYNIKEVFRTFLTL 347
L+ + L + V + E SA N+++ T L L
Sbjct: 126 -LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL 176
Score = 44.9 bits (105), Expect = 3e-06
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLY 47
I+L+ LG GVGK+ L R+ N ++ ++ +TV +
Sbjct: 6 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDF 42
Score = 35.2 bits (80), Expect = 0.006
Identities = 21/111 (18%), Positives = 44/111 (39%), Gaps = 1/111 (0%)
Query: 122 HHRAVHLEDVSEWLYCELPKLRYVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLES 181
+ V ++ + DT G +F ++ A FLL++ T +S
Sbjct: 43 REKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQS 102
Query: 182 FQSVKCYFEEIREQRQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCG 232
F +V+ + +++ + IV+ GNK+D+ + ++ D G
Sbjct: 103 FLNVRNWMSQLQANAYC-ENPDIVLIGNKADLPDQREVNERQARELADKYG 152
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 49.3 bits (116), Expect = 1e-07
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 8/140 (5%)
Query: 9 ERIRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGN 68
E+ RLV++GG GVGKS + +F+ + + Y T+ED Y++ + + + AG
Sbjct: 4 EKYRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQ 63
Query: 69 -------KSDMTSHHRAVHLEDVSEWLYCELP-KLRYVIQSSSFGDEIPIVVAGNKSDMT 120
+ M + + + V++ E K + I DE P+++ GNK+D+
Sbjct: 64 EEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLD 123
Query: 121 SHHRAVHLEDVSEWLYCELP 140
+ E ++
Sbjct: 124 HQRQVTQEEGQQLARQLKVT 143
Score = 44.3 bits (103), Expect = 4e-06
Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 12/131 (9%)
Query: 213 MTSHHRAVHLEDVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEI 272
+DILDT G +F AMR + T FLLV+S T SF+ + + +I
Sbjct: 43 TKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQI 102
Query: 273 REQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQLLECSAK 332
+ +FP +L+ + L+ + V + ++ +E SAK
Sbjct: 103 LRVKDRDEFP------------MILIGNKADLDHQRQVTQEEGQQLARQLKVTYMEASAK 150
Query: 333 DNYNIKEVFRT 343
N+ + F
Sbjct: 151 IRMNVDQAFHE 161
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 48.8 bits (115), Expect = 1e-07
Identities = 32/152 (21%), Positives = 58/152 (38%), Gaps = 13/152 (8%)
Query: 192 IREQRQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQFPAMRRLSIATAHAFL 251
R F G + + + + DT G +F ++ I + A +
Sbjct: 18 TRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSAAAV 77
Query: 252 LVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVK 311
+VY T + SFQ + +++R +R +LV + T L + V
Sbjct: 78 VVYDITNVNSFQQTTKWIDDVRTERGS-------------DVIIMLVGNKTDLADKRQVS 124
Query: 312 CYFEEIREQRQDFQLLECSAKDNYNIKEVFRT 343
E + + + +E SAK YN+K++FR
Sbjct: 125 IEEGERKAKELNVMFIETSAKAGYNVKQLFRR 156
Score = 47.6 bits (112), Expect = 3e-07
Identities = 22/120 (18%), Positives = 50/120 (41%), Gaps = 8/120 (6%)
Query: 12 RLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGNKSD 71
+LV LG Q VGK+ ++ RF+++++ + Y++T+ + + + +
Sbjct: 2 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 61
Query: 72 MTSHHR--------AVHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHH 123
S AV + D++ + + G ++ I++ GNK+D+
Sbjct: 62 FRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKR 121
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 48.8 bits (115), Expect = 1e-07
Identities = 23/148 (15%), Positives = 55/148 (37%), Gaps = 7/148 (4%)
Query: 8 NERIRLVILGGQGVGKSCILKRFLFNTYSDRYRST---VEDLYSRDFHVGAVTIKEIPIV 64
++ +R+++LG GK+ +LK+ S + ++ + S+ F + I +
Sbjct: 14 DQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKI 73
Query: 65 VAGNKSDMTSHHRAVHLEDV-SEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHH 123
+S + +++ D + E + + +P+++ NK D
Sbjct: 74 RPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQD---LL 130
Query: 124 RAVHLEDVSEWLYCELPKLRYVDILDTC 151
A +++E L + R I
Sbjct: 131 TAAPASEIAEGLNLHTIRDRVWQIQSCS 158
Score = 33.4 bits (75), Expect = 0.023
Identities = 7/52 (13%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Query: 295 FLLVYSTTCLESFQSVKCYFEEIRE---QRQDFQLLECSAKDNYNIKEVFRT 343
L+ + L + E + + + +Q+ CSA +++
Sbjct: 120 VLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNW 171
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 48.8 bits (115), Expect = 1e-07
Identities = 21/148 (14%), Positives = 53/148 (35%), Gaps = 7/148 (4%)
Query: 8 NERIRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIP---IV 64
N+ +R+++LG GK+ IL + + ++ + + + ++ +
Sbjct: 10 NKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKI 69
Query: 65 VAGNKSDMTSHHRAVHLEDVS-EWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHH 123
+ T + + D + E + + I + + I++ NK D
Sbjct: 70 RPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQD---LP 126
Query: 124 RAVHLEDVSEWLYCELPKLRYVDILDTC 151
A+ ++ E L + R + +C
Sbjct: 127 DAMKPHEIQEKLGLTRIRDRNWYVQPSC 154
Score = 34.5 bits (78), Expect = 0.008
Identities = 11/117 (9%), Positives = 28/117 (23%), Gaps = 9/117 (7%)
Query: 226 DILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMR 285
++ D G + + R + V + + I R+
Sbjct: 59 NVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDRE-------- 110
Query: 286 RLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQLLECSAKDNYNIKEVFR 342
+ A F ++ R + +++ + A + E
Sbjct: 111 -MRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLT 166
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 48.7 bits (115), Expect = 1e-07
Identities = 22/120 (18%), Positives = 41/120 (34%), Gaps = 17/120 (14%)
Query: 226 DILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMR 285
I DT G +F A+ R A L+VY T ++ + + + R
Sbjct: 56 QIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTN-------- 107
Query: 286 RLSIATAHAFLLVYSTTCLESFQSVKCYFEEIRE--QRQDFQLLECSAKDNYNIKEVFRT 343
+++ + +EE ++ + LE SAK N+++ F
Sbjct: 108 -------PNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLE 160
Score = 43.7 bits (102), Expect = 7e-06
Identities = 24/127 (18%), Positives = 43/127 (33%), Gaps = 8/127 (6%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVE-DLYSRDFHVGAVTIKEIPIVVAGNK 69
+ +I+G GVGKSC+L +F + T+ + +R V IK AG +
Sbjct: 5 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQE 64
Query: 70 SDMTSHHRAVHLEDVSEWLYC-------ELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSH 122
+ +Y + I++ GNK+D+ +
Sbjct: 65 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQ 124
Query: 123 HRAVHLE 129
+ E
Sbjct: 125 RDVTYEE 131
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 48.1 bits (113), Expect = 2e-07
Identities = 21/134 (15%), Positives = 48/134 (35%), Gaps = 11/134 (8%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGNKS 70
+++++G VGK+C+ RF + DR +T+ + +I + +
Sbjct: 3 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQE 62
Query: 71 DMTSHHRAVHLEDVSEWLYC----------ELPKLRYVIQSSSFGDEIPIVVAGNKSDMT 120
+ +V ++ LP + ++IP ++ GNK D+
Sbjct: 63 RFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLR 122
Query: 121 SHHRAVHLEDVSEW 134
V + ++
Sbjct: 123 -SAIQVPTDLAQKF 135
Score = 38.9 bits (89), Expect = 3e-04
Identities = 33/156 (21%), Positives = 53/156 (33%), Gaps = 16/156 (10%)
Query: 192 IREQRQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQF-PAMRRLSIATAHAF 250
R F + G + + + DT G +F +M + HA
Sbjct: 20 YRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAV 79
Query: 251 LLVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSV 310
+ VY T + SF S+ + EE ++ P +LV + L S V
Sbjct: 80 VFVYDMTNMASFHSLPAWIEECKQHLLANDIP------------RILVGNKCDLRSAIQV 127
Query: 311 KCYFEEIREQRQDFQLLECSAK---DNYNIKEVFRT 343
+ L E SAK DN +++ +F T
Sbjct: 128 PTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMT 163
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 47.0 bits (110), Expect = 6e-07
Identities = 32/152 (21%), Positives = 50/152 (32%), Gaps = 10/152 (6%)
Query: 192 IREQRQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQFPAMRRLSIATAHAFL 251
+R DF E G H +I DT G +F ++ + A A L
Sbjct: 21 LRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAAL 80
Query: 252 LVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVK 311
+VY T +SF + + +E+ EQ A+ + V
Sbjct: 81 VVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGN----------KIDMLQEGGERKVA 130
Query: 312 CYFEEIREQRQDFQLLECSAKDNYNIKEVFRT 343
E + + E SAK N+ +VF
Sbjct: 131 REEGEKLAEEKGLLFFETSAKTGENVNDVFLG 162
Score = 46.2 bits (108), Expect = 1e-06
Identities = 27/145 (18%), Positives = 49/145 (33%), Gaps = 8/145 (5%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGNKS 70
I+LV+LG VGKS I+ RF+ N +++ T+ + + I +
Sbjct: 4 IKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQE 63
Query: 71 D--------MTSHHRAVHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSH 122
+ A+ + DV++ + +I I + GNK DM
Sbjct: 64 RFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQE 123
Query: 123 HRAVHLEDVSEWLYCELPKLRYVDI 147
+ E L + +
Sbjct: 124 GGERKVAREEGEKLAEEKGLLFFET 148
Score = 30.0 bits (66), Expect = 0.30
Identities = 24/103 (23%), Positives = 38/103 (36%)
Query: 134 WLYCELPKLRYVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIR 193
+I DT G +F ++ + A A L+VY T +SF + + +E+
Sbjct: 43 QRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELH 102
Query: 194 EQRQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQF 236
EQ I +V R V E+ + L L F
Sbjct: 103 EQASKDIIIALVGNKIDMLQEGGERKVAREEGEKLAEEKGLLF 145
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 46.9 bits (110), Expect = 8e-07
Identities = 22/141 (15%), Positives = 41/141 (29%), Gaps = 14/141 (9%)
Query: 14 VILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGNKSDMT 73
+ +G GK+ + R L Y D S + + + +
Sbjct: 4 LFVGLCDSGKTLLFVRLLTGQYRDTQTSITDSSAIYKVNNNRGNSLTLIDLPGHESLRFQ 63
Query: 74 SHHRAVHLEDVSEWLYCELPKLRYVIQSSSF-----------GDEIPIVVAGNKSDMTSH 122
R ++ R V + F + +++A NK D+
Sbjct: 64 LLDRFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDIAM- 122
Query: 123 HRAVHLEDVSEWLYCELPKLR 143
A + + + L EL LR
Sbjct: 123 --AKSAKLIQQQLEKELNTLR 141
Score = 25.7 bits (55), Expect = 8.3
Identities = 11/82 (13%), Positives = 25/82 (30%), Gaps = 1/82 (1%)
Query: 135 LYCELPKLRYVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFE-EIR 193
+ + L L+F + R + +V S + V + +
Sbjct: 41 VNNNRGNSLTLIDLPGHESLRFQLLDRFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLI 100
Query: 194 EQRQDFQEIPIVVAGNKSDMTS 215
+ +++A NK D+
Sbjct: 101 DSMALKNSPSLLIACNKQDIAM 122
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 184
Score = 46.6 bits (109), Expect = 8e-07
Identities = 10/42 (23%), Positives = 27/42 (64%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFH 52
++++ILG GVGK+ ++ +++ +S++Y++T+ +
Sbjct: 3 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV 44
Score = 40.8 bits (94), Expect = 7e-05
Identities = 26/148 (17%), Positives = 52/148 (35%), Gaps = 9/148 (6%)
Query: 196 RQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQFPAMRRLSIATAHAFLLVYS 255
+ F G L + I DT G +F ++ A +LV+
Sbjct: 24 NKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFD 83
Query: 256 TTCLESFQSVKCYFEEIREQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFE 315
T +F+++ + +E Q F+++ + LE+ Q +
Sbjct: 84 VTAPNTFKTLDSWRDEFLIQASPRDPENFP---------FVVLGNKIDLENRQVATKRAQ 134
Query: 316 EIREQRQDFQLLECSAKDNYNIKEVFRT 343
+ + E SAK+ N+++ F+T
Sbjct: 135 AWCYSKNNIPYFETSAKEAINVEQAFQT 162
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 46.6 bits (109), Expect = 8e-07
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Query: 8 NERIRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAG 67
+E +LV++GG GVGKS + +F+ + + Y T+ED Y++ V + + + AG
Sbjct: 4 SETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAG 63
Query: 68 NKSDMTSHHRAVHLEDVSEWLY--------CELPKLRYVIQSSSFGDEIPIVVAGNKSDM 119
+ + + ++ E+ KL I D+ P+V+ GNK+D+
Sbjct: 64 QEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADL 123
Query: 120 TSHH 123
S
Sbjct: 124 ESQR 127
Score = 45.4 bits (106), Expect = 2e-06
Identities = 31/114 (27%), Positives = 42/114 (36%), Gaps = 12/114 (10%)
Query: 230 TCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRLSI 289
T G +F AMR + H FLLV++ +SF V F +I + FP
Sbjct: 61 TAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFP------- 113
Query: 290 ATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQLLECSAKDNYNIKEVFRT 343
+LV + LES + V E SAK N+ E F
Sbjct: 114 -----VVLVGNKADLESQRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQ 162
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 46.2 bits (108), Expect = 9e-07
Identities = 18/148 (12%), Positives = 44/148 (29%), Gaps = 8/148 (5%)
Query: 9 ERIRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTI-----KEIPI 63
E + L ++G Q GK+ + +++ TV + +
Sbjct: 1 EEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRF 60
Query: 64 VVAGNKSDMTSHHRAVHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHH 123
+ ++ + + + IP++V GNK D+
Sbjct: 61 RSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPG-- 118
Query: 124 RAVHLEDVSEWLYCELPKLRYVDILDTC 151
A+ +++ E + + R +
Sbjct: 119 -ALDEKELIEKMNLSAIQDREICCYSIS 145
Score = 30.4 bits (67), Expect = 0.21
Identities = 9/54 (16%), Positives = 18/54 (33%), Gaps = 3/54 (5%)
Query: 293 HAFLLVYSTTCLESFQSVKCYFEEIRE---QRQDFQLLECSAKDNYNIKEVFRT 343
L++ + L K E++ Q ++ S K+ NI +
Sbjct: 105 IPVLVLGNKRDLPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQW 158
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 46.2 bits (108), Expect = 1e-06
Identities = 27/150 (18%), Positives = 53/150 (35%), Gaps = 14/150 (9%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRD--FHVGAVTIKEIPIVVAGN 68
++++ILG GVGK+ ++ R++ + YS +Y++T+ + G AG
Sbjct: 3 LKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQ 62
Query: 69 KSDMTSHHRAVHLEDVSEWLYCELPKLRYVIQSSSFG-----------DEIPIVVAGNKS 117
+ + D +Y + S + P V+ GNK
Sbjct: 63 ERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKI 122
Query: 118 DMTSHHRAVHLEDVSEWLYCELPKLRYVDI 147
D + + E ++ L L +
Sbjct: 123 DA-EESKKIVSEKSAQELAKSLGDIPLFLT 151
Score = 43.9 bits (102), Expect = 7e-06
Identities = 22/144 (15%), Positives = 45/144 (31%), Gaps = 7/144 (4%)
Query: 200 QEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCL 259
Q+ + + + + + DT G +F ++ A +LVY T
Sbjct: 29 QQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNA 88
Query: 260 ESFQSVKCYFEEIREQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIRE 319
SF+++K + +E + + + +E+ +
Sbjct: 89 SSFENIKSWRDEFLVHANVNSPETFPFVILGNKI-------DAEESKKIVSEKSAQELAK 141
Query: 320 QRQDFQLLECSAKDNYNIKEVFRT 343
D L SAK+ N+ F
Sbjct: 142 SLGDIPLFLTSAKNAINVDTAFEE 165
Score = 25.4 bits (54), Expect = 9.0
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Query: 134 WLYCELPKLRYVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIR 193
+ + K+ + + DT G +F ++ A +LVY T SF+++K + +E
Sbjct: 43 EVTVDGDKVATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFL 102
Query: 194 EQRQ--DFQEIPIVVAGNKSDMTSHH 217
+ P V+ GNK D
Sbjct: 103 VHANVNSPETFPFVILGNKIDAEESK 128
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 45.9 bits (107), Expect = 1e-06
Identities = 16/83 (19%), Positives = 33/83 (39%)
Query: 8 NERIRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAG 67
++ ++ ILG + VGKS + +F+ + D Y T+E+ +++ V + AG
Sbjct: 2 SKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAG 61
Query: 68 NKSDMTSHHRAVHLEDVSEWLYC 90
+ +Y
Sbjct: 62 QDEYSIFPQTYSIDINGYILVYS 84
Score = 33.9 bits (76), Expect = 0.012
Identities = 13/85 (15%), Positives = 27/85 (31%)
Query: 262 FQSVKCYFEEIREQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQR 321
+ V + + + +LV + L + + + +
Sbjct: 79 YILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHMERVISYEEGKALAES 138
Query: 322 QDFQLLECSAKDNYNIKEVFRTFLT 346
+ LE SAK+N +VFR +
Sbjct: 139 WNAAFLESSAKENQTAVDVFRRIIL 163
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 45.8 bits (107), Expect = 1e-06
Identities = 25/134 (18%), Positives = 45/134 (33%), Gaps = 7/134 (5%)
Query: 12 RLVILGGQGVGKSCILKRFLFNTYSDRYRSTV-EDLYSRDFHVGAVTIKEIPIVVAGNK- 69
+LV++G G GK+ +KR L + +Y +T+ +++ FH IK AG +
Sbjct: 5 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEK 64
Query: 70 -----SDMTSHHRAVHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHHR 124
+ + + + IPIV+ GNK D+
Sbjct: 65 FGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKV 124
Query: 125 AVHLEDVSEWLYCE 138
+
Sbjct: 125 KAKSIVFHRKKNLQ 138
Score = 33.1 bits (74), Expect = 0.030
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 312 CYFEEIREQRQDFQLLECSAKDNYNIKEVFRT 343
+ ++++ Q + SAK NYN ++ F
Sbjct: 125 KAKSIVFHRKKNLQYYDISAKSNYNFEKPFLW 156
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 45.3 bits (106), Expect = 2e-06
Identities = 27/152 (17%), Positives = 49/152 (32%), Gaps = 9/152 (5%)
Query: 192 IREQRQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQFPAMRRLSIATAHAFL 251
R F G + H + I DT G +F ++R + L
Sbjct: 24 NRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCL 83
Query: 252 LVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVK 311
L +S +SFQ++ + +E + + F+++ + + Q
Sbjct: 84 LTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFP---------FVILGNKIDISERQVST 134
Query: 312 CYFEEIREQRQDFQLLECSAKDNYNIKEVFRT 343
+ D+ E SAKD N+ F
Sbjct: 135 EEAQAWCRDNGDYPYFETSAKDATNVAAAFEE 166
Score = 44.2 bits (103), Expect = 5e-06
Identities = 25/136 (18%), Positives = 47/136 (34%), Gaps = 14/136 (10%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGNKS 70
++++LG GVGKS ++ R++ N + + T+ + + I +
Sbjct: 7 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 66
Query: 71 DMTSHHRAVHLEDVSEWLYCELPKLRYVIQSSSFGDEI------------PIVVAGNKSD 118
S + L + + S++ E P V+ GNK D
Sbjct: 67 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKID 126
Query: 119 MTSHHRAVHLEDVSEW 134
+ R V E+ W
Sbjct: 127 I--SERQVSTEEAQAW 140
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 45.0 bits (105), Expect = 2e-06
Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 9/131 (6%)
Query: 12 RLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGNKSD 71
+LV++G GVGKS + +F + Y T+ED Y + + + AG +
Sbjct: 6 KLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEF 65
Query: 72 MTSH-------HRAVHLEDVSEWLYCE-LPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHH 123
+ + V++ E + + +I + P+++ NK D+ H
Sbjct: 66 SAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDL-MHL 124
Query: 124 RAVHLEDVSEW 134
R V + E
Sbjct: 125 RKVTRDQGKEM 135
Score = 42.0 bits (97), Expect = 3e-05
Identities = 33/132 (25%), Positives = 52/132 (39%), Gaps = 13/132 (9%)
Query: 213 MTSHHRAVHLEDVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEI 272
+ +D+LDT G +F AMR + T FL+VYS T SF+ V + + I
Sbjct: 42 LKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLI 101
Query: 273 REQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQLLECSAK 332
+ FP +LV + L + V + + + +E SAK
Sbjct: 102 LRVKDRESFP------------MILVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAK 149
Query: 333 D-NYNIKEVFRT 343
D N+ + F
Sbjct: 150 DPPLNVDKTFHD 161
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 45.0 bits (105), Expect = 3e-06
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFH 52
++L I G GVGKS ++ RFL + Y T+E Y
Sbjct: 3 VKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQAT 44
Score = 26.9 bits (58), Expect = 3.0
Identities = 22/117 (18%), Positives = 35/117 (29%), Gaps = 13/117 (11%)
Query: 228 LDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRL 287
+ + R + F+LVY T SF+ V + E ++ +
Sbjct: 54 ILDTAGQEDTIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLIL-- 111
Query: 288 SIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQLLECSAKDNY-NIKEVFRT 343
V + L+ + V E ECSA NI E+F
Sbjct: 112 ----------VGNKADLDHSRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYE 158
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 44.6 bits (104), Expect = 4e-06
Identities = 28/154 (18%), Positives = 50/154 (32%), Gaps = 17/154 (11%)
Query: 192 IREQRQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQFPAMRRLSIATAHAFL 251
R F G + L I DT G +F A+ + + A +
Sbjct: 22 WRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGLERFRALAPMYYRGSAAAI 81
Query: 252 LVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVK 311
+VY T E+F ++K + E+R+ A+ + +
Sbjct: 82 IVYDITKEETFSTLKNWVRELRQHGPPSIVVAIA---------------GNKCDLTDVRE 126
Query: 312 CYFEEIREQRQDFQL--LECSAKDNYNIKEVFRT 343
+ ++ +E SAK+ NI E+F
Sbjct: 127 VMERDAKDYADSIHAIFVETSAKNAININELFIE 160
Score = 42.7 bits (99), Expect = 1e-05
Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 8/128 (6%)
Query: 10 RIRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAG-- 67
+++ +LG GVGKS I+ RF+ +++ T+ + + + I
Sbjct: 4 ELKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGL 63
Query: 68 ------NKSDMTSHHRAVHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTS 121
A+ + D+++ K I + +AGNK D+T
Sbjct: 64 ERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTD 123
Query: 122 HHRAVHLE 129
+ +
Sbjct: 124 VREVMERD 131
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 44.2 bits (103), Expect = 5e-06
Identities = 23/142 (16%), Positives = 48/142 (33%), Gaps = 6/142 (4%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGNKS 70
+RL +LG GKS ++ RFL +Y T + Y ++ V T + AG
Sbjct: 6 LRLGVLGDARSGKSSLIHRFLTGSYQV-LEKTESEQYKKEMLVDGQTHLVLIREEAGAPD 64
Query: 71 DMTSHHRAVHLEDVSEWLYCELPKLRYVIQ-----SSSFGDEIPIVVAGNKSDMTSHHRA 125
S + S + + + + + G + +++
Sbjct: 65 AKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDRISASSPR 124
Query: 126 VHLEDVSEWLYCELPKLRYVDI 147
V + + L ++ + Y +
Sbjct: 125 VVGDARARALCADMKRCSYYET 146
Score = 32.3 bits (72), Expect = 0.047
Identities = 18/127 (14%), Positives = 32/127 (25%), Gaps = 7/127 (5%)
Query: 217 HRAVHLEDVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQR 276
++ L D + A A A + V+S SFQ+V ++ R
Sbjct: 41 YKKEMLVDGQTHLVLIREEAGAPDAKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLR 100
Query: 277 QDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQLLECSAKDNYN 336
+ + L + + E A N
Sbjct: 101 GEGRGGLALALVGTQDRISASSPRVVGDA-------RARALCADMKRCSYYETCATYGLN 153
Query: 337 IKEVFRT 343
+ VF+
Sbjct: 154 VDRVFQE 160
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 42.3 bits (98), Expect = 2e-05
Identities = 21/148 (14%), Positives = 53/148 (35%), Gaps = 7/148 (4%)
Query: 8 NERIRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAG 67
++ +++I+G GK+ IL +F N + ++ + + +I +
Sbjct: 13 HQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESL 72
Query: 68 NKSDMTSHHRA----VHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHH 123
S T + V ++ + Y + + + +++ NK D+
Sbjct: 73 RSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDV---K 129
Query: 124 RAVHLEDVSEWLYCELPKLRYVDILDTC 151
+ + ++S++L K I C
Sbjct: 130 ECMTVAEISQFLKLTSIKDHQWHIQACC 157
Score = 31.5 bits (70), Expect = 0.098
Identities = 3/41 (7%), Positives = 14/41 (34%)
Query: 310 VKCYFEEIREQRQDFQLLECSAKDNYNIKEVFRTFLTLSQI 350
+ + + + + + C A + + ++ +I
Sbjct: 137 ISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRLKI 177
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 42.4 bits (98), Expect = 3e-05
Identities = 24/132 (18%), Positives = 44/132 (33%), Gaps = 7/132 (5%)
Query: 8 NERIRLVILGGQGVGKSCILKRFL---FNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIV 64
+ +LV LG GK+ +L + T E+L +
Sbjct: 11 KKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHIQA 70
Query: 65 VAGNKSDMTSHHRAVHLEDVS-EWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHH 123
K+ + + + V L D + E + + + +PI++ GNK D
Sbjct: 71 RRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDR---P 127
Query: 124 RAVHLEDVSEWL 135
A+ E + E
Sbjct: 128 EAISEERLREMF 139
Score = 30.1 bits (66), Expect = 0.31
Identities = 7/39 (17%), Positives = 11/39 (28%)
Query: 304 LESFQSVKCYFEEIREQRQDFQLLECSAKDNYNIKEVFR 342
L + K + ++ CS E FR
Sbjct: 141 LYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFR 179
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 41.6 bits (96), Expect = 3e-05
Identities = 22/149 (14%), Positives = 46/149 (30%), Gaps = 15/149 (10%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGNKS 70
+R++++G GK+ IL + T+ + V I V G
Sbjct: 1 MRILMVGLDAAGKTTILYKLKLGEIVT----TIPTIGFNVETVEYKNISFTVWDVGGQDK 56
Query: 71 DMTSHHRA--------VHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSH 122
++ E + + + + ++V NK D
Sbjct: 57 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQD---L 113
Query: 123 HRAVHLEDVSEWLYCELPKLRYVDILDTC 151
A++ ++++ L + R I TC
Sbjct: 114 PNAMNAAEITDKLGLHSLRHRNWYIQATC 142
Score = 32.7 bits (73), Expect = 0.031
Identities = 7/115 (6%), Positives = 25/115 (21%), Gaps = 9/115 (7%)
Query: 229 DTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRLS 288
D G + + R + V + E + + + + + +
Sbjct: 50 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFAN 109
Query: 289 IATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQLLECSAKDNYNIKEVFRT 343
+ + + +++ + A + E
Sbjct: 110 KQDLP---------NAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDW 155
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 41.2 bits (95), Expect = 5e-05
Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 7/148 (4%)
Query: 8 NERIRLVILGGQGVGKSCILKRFL---FNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIV 64
+R++ILG G GK+ IL R T VE + ++ + + +
Sbjct: 3 TREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGLTSI 62
Query: 65 VAGNKSDMTSHHRAVHLEDVSEWLYCELPKLRYVIQSSSFG-DEIPIVVAGNKSDMTSHH 123
+ ++ +++ D + + K V + +VV NK DM
Sbjct: 63 RPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDM---E 119
Query: 124 RAVHLEDVSEWLYCELPKLRYVDILDTC 151
+A+ +++ L K R I T
Sbjct: 120 QAMTSSEMANSLGLPALKDRKWQIFKTS 147
Score = 28.9 bits (63), Expect = 0.63
Identities = 4/24 (16%), Positives = 10/24 (41%)
Query: 320 QRQDFQLLECSAKDNYNIKEVFRT 343
+ + +Q+ + SA + E
Sbjct: 137 KDRKWQIFKTSATKGTGLDEAMEW 160
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 41.1 bits (95), Expect = 7e-05
Identities = 21/115 (18%), Positives = 36/115 (31%), Gaps = 10/115 (8%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVG----------AVTIKE 60
++L++LG GKS I+K+ + + I
Sbjct: 3 VKLLLLGAGESGKSTIVKQMKIIHEAGTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHC 62
Query: 61 IPIVVAGNKSDMTSHHRAVHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGN 115
V A S + V ED E KL I ++ + + I++ N
Sbjct: 63 FEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLN 117
Score = 31.1 bits (69), Expect = 0.15
Identities = 15/139 (10%), Positives = 36/139 (25%), Gaps = 24/139 (17%)
Query: 229 DTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQF------- 281
D G A + + + + + + E + F
Sbjct: 48 DVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWF 107
Query: 282 --------------PAMRRLSIATAHAFLLVYS-TTCLESFQSVKCYFEEIREQRQDFQL 326
+ + T E+ ++C FE++ +++ ++
Sbjct: 108 TDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEI 167
Query: 327 L--ECSAKDNYNIKEVFRT 343
A D N++ VF
Sbjct: 168 YTHFTCATDTKNVQFVFDA 186
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 40.9 bits (95), Expect = 1e-04
Identities = 17/134 (12%), Positives = 37/134 (27%), Gaps = 11/134 (8%)
Query: 12 RLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGNKSD 71
RL++LG GKS I+K+ + +
Sbjct: 8 RLLLLGAGESGKSTIVKQMRILHVVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQC 67
Query: 72 MTSHHRAVHLEDVSEWLYC-----------ELPKLRYVIQSSSFGDEIPIVVAGNKSDMT 120
+ + S + E L I ++ + I +++ NK D+
Sbjct: 68 FNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLL 127
Query: 121 SHHRAVHLEDVSEW 134
+ + ++
Sbjct: 128 AEKVLAGKSKIEDY 141
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 40.1 bits (92), Expect = 1e-04
Identities = 9/31 (29%), Positives = 20/31 (64%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRS 41
I++V++G VGKS +++R+ ++ Y+
Sbjct: 3 IKMVVVGNGAVGKSSMIQRYCKGIFTKDYKK 33
Score = 38.1 bits (87), Expect = 5e-04
Identities = 29/148 (19%), Positives = 54/148 (36%), Gaps = 14/148 (9%)
Query: 196 RQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQFPAMRRLSIATAHAFLLVYS 255
+ F + G + + DT G +F A+ + A A +LV+S
Sbjct: 24 KGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFS 83
Query: 256 TTCLESFQSVKCYFEEIREQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFE 315
TT ESF+++ + E++ + D + + L +K
Sbjct: 84 TTDRESFEAISSWREKVVAEVGDIPTALV--------------QNKIDLLDDSCIKNEEA 129
Query: 316 EIREQRQDFQLLECSAKDNYNIKEVFRT 343
E +R + S K++ N+ EVF+
Sbjct: 130 EGLAKRLKLRFYRTSVKEDLNVSEVFKY 157
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 40.0 bits (92), Expect = 1e-04
Identities = 18/144 (12%), Positives = 46/144 (31%), Gaps = 4/144 (2%)
Query: 8 NERIRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAG 67
N+ +R++ILG G GK+ IL R + ++ + + + + ++ +
Sbjct: 15 NKELRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVETLSYKNLKLNVWDLGGQTSI 74
Query: 68 NKSDMTSHHRA----VHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHH 123
+ ++ + K +++ + ++V NK D
Sbjct: 75 RPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPGAL 134
Query: 124 RAVHLEDVSEWLYCELPKLRYVDI 147
A + + + V
Sbjct: 135 SASEVSKELNLVELKDRSWSIVAS 158
Score = 35.0 bits (79), Expect = 0.006
Identities = 16/122 (13%), Positives = 32/122 (26%), Gaps = 15/122 (12%)
Query: 225 VDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQFPAM 284
+++ D G R A A + V + +E+ Q+ +
Sbjct: 63 LNVWDLGGQTSIRPYWRCYYADTAAVIFVVD---STDKDRMSTASKELHLMLQEEELQDA 119
Query: 285 RRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIRE---QRQDFQLLECSAKDNYNIKEVF 341
L A S +E+ + + + ++ SA I E
Sbjct: 120 ALLVFANKQ---------DQPGALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGL 170
Query: 342 RT 343
Sbjct: 171 DW 172
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 38.5 bits (88), Expect = 4e-04
Identities = 24/145 (16%), Positives = 54/145 (37%), Gaps = 7/145 (4%)
Query: 11 IRLVILGGQGVGKSCILKRFL---FNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAG 67
+RL++LG GK+ ILK+F +T S ++ L R F + + + +
Sbjct: 3 LRLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSY 62
Query: 68 NKSDMTSHHRAVHLEDVSEWLYC-ELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHHRAV 126
++ S + + D ++ + + + +++ NK D+ A+
Sbjct: 63 WRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDL---PGAL 119
Query: 127 HLEDVSEWLYCELPKLRYVDILDTC 151
+ E L + + + I
Sbjct: 120 SCNAIQEALELDSIRSHHWRIQGCS 144
Score = 31.6 bits (70), Expect = 0.081
Identities = 14/136 (10%), Positives = 35/136 (25%), Gaps = 15/136 (11%)
Query: 213 MTSHHRAVHLEDVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEI 272
++I D G + R + + V + + Q + + +
Sbjct: 36 FNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSL 95
Query: 273 REQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIRE---QRQDFQLLEC 329
+ + L+ + L S E + + +++ C
Sbjct: 96 LVEERLAGAT------------LLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGC 143
Query: 330 SAKDNYNIKEVFRTFL 345
SA ++ L
Sbjct: 144 SAVTGEDLLPGIDWLL 159
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 38.2 bits (87), Expect = 6e-04
Identities = 25/133 (18%), Positives = 43/133 (32%), Gaps = 11/133 (8%)
Query: 8 NERIRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAG 67
N R+V++G QGVGKS + F S V + + + I++
Sbjct: 1 NTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDM 60
Query: 68 NKSDMTSHHRAVHLEDVSEWLYCELPKLRYVIQSS-----------SFGDEIPIVVAGNK 116
++ + H V + ++IPI++ GNK
Sbjct: 61 WENKGENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNK 120
Query: 117 SDMTSHHRAVHLE 129
SD+ E
Sbjct: 121 SDLVRCREVSVSE 133
Score = 31.7 bits (70), Expect = 0.081
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 320 QRQDFQLLECSAKDNYNIKEVFRT 343
D + +E SA +N+KE+F
Sbjct: 139 VVFDCKFIETSAAVQHNVKELFEG 162
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 37.4 bits (85), Expect = 9e-04
Identities = 22/123 (17%), Positives = 40/123 (32%), Gaps = 4/123 (3%)
Query: 12 RLVILGGQGVGKSCILKRFL---FNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGN 68
+L+ LG GK+ +L T + T E+L + +
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHIQARRLW 61
Query: 69 KSDMTSHHRAVHLEDVS-EWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHHRAVH 127
K + V L D + + E + + + ++P V+ GNK D +
Sbjct: 62 KDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSEAE 121
Query: 128 LED 130
L
Sbjct: 122 LRS 124
Score = 32.0 bits (71), Expect = 0.058
Identities = 10/133 (7%), Positives = 33/133 (24%), Gaps = 4/133 (3%)
Query: 212 DMTSHHRAVHLEDVDILDTCGDLQ--FPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYF 269
+ + ++ + + + + + E F +
Sbjct: 31 TWHPTSEELAIGNIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARVEL 90
Query: 270 EEIREQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKCYFEEIREQRQDFQLLEC 329
+ + + P + + A V + + + E ++ ++ C
Sbjct: 91 DALFNIAELKDVPFV--ILGNKIDAPNAVSEAELRSALGLLNTTGSQRIEGQRPVEVFMC 148
Query: 330 SAKDNYNIKEVFR 342
S E F+
Sbjct: 149 SVVMRNGYLEAFQ 161
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 36.8 bits (84), Expect = 0.002
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTV 43
++L++LG GKS +K+ S T
Sbjct: 3 LKLLLLGTGESGKSTFIKQMRIIHGS--GVPTT 33
Score = 28.0 bits (61), Expect = 1.4
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 311 KCYFEEIREQRQDFQLLECSAKDNYNIKEVFRT 343
K + + + + A D NI+ VF
Sbjct: 157 KMFVDLNPDSDKIIYSHFTCATDTENIRFVFAA 189
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 36.3 bits (82), Expect = 0.002
Identities = 8/41 (19%), Positives = 15/41 (36%)
Query: 12 RLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFH 52
++++LG GVGKS + + F +
Sbjct: 3 KVLLLGAPGVGKSALARIFGGVEDGPEAEAAGHTYDRSIVV 43
Score = 32.0 bits (71), Expect = 0.056
Identities = 11/93 (11%), Positives = 29/93 (31%), Gaps = 2/93 (2%)
Query: 253 VYSTTCLESFQSVKCYFEEIREQRQDFQFPAMRRLSIATAHAFLLVYSTTCLESFQSVKC 312
+ V Y + + ++ ++ + +S +
Sbjct: 64 LPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRSREV 123
Query: 313 YFEEIRE--QRQDFQLLECSAKDNYNIKEVFRT 343
+E R D + +E SA ++N++ +F
Sbjct: 124 SVDEGRACAVVFDCKFIETSAALHHNVQALFEG 156
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 36.0 bits (82), Expect = 0.003
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSD 37
+++++LG GKS LK+ D
Sbjct: 3 VKILLLGAGESGKSTFLKQMRIIHGQD 29
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 35.0 bits (79), Expect = 0.008
Identities = 25/156 (16%), Positives = 48/156 (30%), Gaps = 40/156 (25%)
Query: 12 RLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGNKSD 71
++I G Q GK+ +L +D R TV + A + +
Sbjct: 5 SIIIAGPQNSGKTSLLTLLT----TDSVRPTV----VSQEPLSAADYDGSGVTLVDFPGH 56
Query: 72 MTSHHRAVH------------------------LEDVSEWLYCELPKLRYVIQSSSFGDE 107
+ ++ L +E+L L ++
Sbjct: 57 VKLRYKLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCEN-----G 111
Query: 108 IPIVVAGNKSDMTSHHRAVHLEDVSEWLYCELPKLR 143
I I++A NKS++ A + + L E+ K+
Sbjct: 112 IDILIACNKSEL---FTARPPSKIKDALESEIQKVI 144
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 30.9 bits (69), Expect = 0.18
Identities = 14/151 (9%), Positives = 43/151 (28%), Gaps = 17/151 (11%)
Query: 7 DNERIRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVA 66
D + ++++G GVGKS N+ ++ S + + + +
Sbjct: 29 DVNSLTILVMGKGGVGKSS-----TVNSIIGERVVSISPFQS-------EGPRPVMVSRS 76
Query: 67 GNKSDMTSHHRAVHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHHRAV 126
+ L + L ++ + ++ + V + + +
Sbjct: 77 RAGFTLNIID-TPGLIEGGYINDMALNIIKSFL--LDKTIDVLLYVDRLDAYRVDNLDKL 133
Query: 127 HLEDVSEWLYCELPKLRYVDILDTCGDLQFP 157
+ +++ + + T P
Sbjct: 134 VAKAITDSFGKGI--WNKAIVALTHAQFSPP 162
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 29.7 bits (65), Expect = 0.31
Identities = 15/124 (12%), Positives = 34/124 (27%), Gaps = 3/124 (2%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGNKS 70
+++VI G GKS +L + T +RD + I +P+ +
Sbjct: 2 MKVVIAGRPNAGKSSLLNAL---AGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAG 58
Query: 71 DMTSHHRAVHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHHRAVHLED 130
+ + W E + + D + + +
Sbjct: 59 LREASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVV 118
Query: 131 VSEW 134
++
Sbjct: 119 RNKA 122
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 30.2 bits (67), Expect = 0.37
Identities = 32/228 (14%), Positives = 63/228 (27%), Gaps = 18/228 (7%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGNKS 70
+RL + G G GKS L+ F L V + + P S
Sbjct: 55 LRLGVTGTPGAGKSTFLEAF------------GMLLIREGLKVAVIAVD--PSSPVTGGS 100
Query: 71 DMTSHHRAVHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHHRAVHLED 130
+ R L +P ++ +S E+ ++ D+ +
Sbjct: 101 ILGDKTRMNDLARAEAAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQS 160
Query: 131 VSEWLYCELPKLRYVDILDTCGDLQF---PAMRRLSIATAHAFLLVYSTTCLESFQSVKC 187
+E + + I DLQ M + + T + +
Sbjct: 161 ETEVARMVDCFI-SLQIAGGGDDLQGIKKGLMEVADLIVINKDDGDNHTNVAIARHMYES 219
Query: 188 YFEEIREQRQDFQEIPIVVAGNKSDMTSHHRAVHLEDVDILDTCGDLQ 235
+R + ++Q + + + ++ L G LQ
Sbjct: 220 ALHILRRKYDEWQPRVLTCSALEKRGIDEIWHAIIDFKTALTASGRLQ 267
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 239
Score = 29.2 bits (65), Expect = 0.58
Identities = 21/111 (18%), Positives = 32/111 (28%), Gaps = 3/111 (2%)
Query: 118 DMTSHHRAVHLEDVSEWLYCELPKLRYVDILDTCGDLQFPAMRRLSIATAHAFLLVYSTT 177
D R + E PK V ++D G F + A +L+ +
Sbjct: 60 DKLKAERERGITIDIALWKFETPK-YQVTVIDAPGHRDFIKNMITGTSQADCAILIIAGG 118
Query: 178 --CLESFQSVKCYFEEIREQRQDFQEIPIVVAGNKSDMTSHHRAVHLEDVD 226
E+ S E ++VA NK D + E V
Sbjct: 119 VGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDSVKWDESRFQEIVK 169
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 28.6 bits (63), Expect = 1.4
Identities = 6/32 (18%), Positives = 12/32 (37%)
Query: 7 DNERIRLVILGGQGVGKSCILKRFLFNTYSDR 38
D+ + + + G G GKS + +
Sbjct: 53 DSSVLNVAVTGETGSGKSSFINTLRGIGNEEE 84
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 27.6 bits (60), Expect = 1.5
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIV 64
+R+VI+G VGKS +L R DR T +RD + I+ I
Sbjct: 1 LRMVIVGKPNVGKSTLLNRL---LNEDRAIVTDIPGTTRDVISEEIVIRGILFR 51
>d2i7ta1 d.157.1.10 (A:9-459) Cleavage and polyadenylation
specificity factor subunit 3 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 451
Score = 28.6 bits (62), Expect = 1.5
Identities = 7/31 (22%), Positives = 17/31 (54%), Gaps = 6/31 (19%)
Query: 8 NERIRLVILGGQG-VGKSCIL-----KRFLF 32
++++ + LG VG+SCI+ ++ +
Sbjct: 1 SDQLLIRPLGAGQEVGRSCIILEFKGRKIML 31
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 27.7 bits (60), Expect = 1.8
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 8 NERIRLVILGGQGVGKSCILKRFL 31
+ I++ I+G VGKS + L
Sbjct: 6 TDAIKVAIVGRPNVGKSTLFNAIL 29
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 194
Score = 27.6 bits (60), Expect = 1.9
Identities = 17/132 (12%), Positives = 35/132 (26%), Gaps = 2/132 (1%)
Query: 12 RLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGNKSD 71
+ +LGG G GK R + Y + S +L + E+
Sbjct: 3 VVFVLGGPGAGKGTQCAR-IVEKYGYTHLSA-GELLRDERKNPDSQYGELIEKYIKEGKI 60
Query: 72 MTSHHRAVHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHHRAVHLEDV 131
+ L+ + + + ++ + D + V D
Sbjct: 61 VPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDC 120
Query: 132 SEWLYCELPKLR 143
+ + E R
Sbjct: 121 NNEICIERCLER 132
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 27.2 bits (59), Expect = 2.3
Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 13 LVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGNKSDM 72
+V+ G G GKS +LK+ LF +S + +V +R+ G K+ V
Sbjct: 3 VVLSGPSGAGKSTLLKK-LFQEHSSIFGFSVSHT-TRNPRPGEEDGKDYYFVTREMMQRD 60
Query: 73 TSHHRAVHLEDVSEWLYC 90
+ + + S LY
Sbjct: 61 IAAGDFIEHAEFSGNLYG 78
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 27.1 bits (58), Expect = 2.6
Identities = 16/156 (10%), Positives = 38/156 (24%), Gaps = 15/156 (9%)
Query: 7 DNERIRLVILGGQGVGKSCILKRFL------------FNTYSDRYRSTVEDLYSRDFHVG 54
+ I + G GKS L T + D
Sbjct: 13 SDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGY 72
Query: 55 AVTIKEIPIVVAGNKSDMTSHHRAVHLEDV---SEWLYCELPKLRYVIQSSSFGDEIPIV 111
+ ++ + L+ + + + + +I+ + + +V
Sbjct: 73 GYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLV 132
Query: 112 VAGNKSDMTSHHRAVHLEDVSEWLYCELPKLRYVDI 147
+ + S R L V E + ++
Sbjct: 133 LLTKADKLASGARKAQLNMVREAVLAFNGDVQVETF 168
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 26.7 bits (58), Expect = 3.2
Identities = 21/125 (16%), Positives = 38/125 (30%), Gaps = 5/125 (4%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRST---VEDLYSRDFHVGAVTIKEIPIVVAG 67
+R I+G G GK + R + + ++ S+ + D R +G + I
Sbjct: 7 LRAAIMGAPGSGKGTVSSR-ITKHFELKHLSSGDLLRDNMLRGTEIGVLAKTFIDQGKLI 65
Query: 68 NKSDMTSHHRAVHLEDVSE-WLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHHRAV 126
MT WL P+ ++ +I V+ N R
Sbjct: 66 PDDVMTRLVLHELKNLTQYNWLLDGFPRTLPQAEALDRAYQIDTVINLNVPFEVIKQRLT 125
Query: 127 HLEDV 131
+
Sbjct: 126 DRPET 130
>d1sxja1 a.80.1.1 (A:548-693) Replication factor C1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 146
Score = 26.7 bits (59), Expect = 3.2
Identities = 9/53 (16%), Positives = 15/53 (28%), Gaps = 5/53 (9%)
Query: 315 EEIREQRQDFQLLE-----CSAKDNYNIKEVFRTFLTLSQILTTNGDENSLKR 362
++IR Q + LL S + + + L N R
Sbjct: 82 KKIRSSEQLWSLLPLHAVLSSVYPASKVAGHMAGRINFTAWLGQNSKSAKYYR 134
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 26.8 bits (58), Expect = 3.5
Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 9 ERIRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFH 52
E IR+V++G G GK L + + +T + L S+
Sbjct: 1 ESIRMVLIGPPGAGKGTQAPN-LQERFHAAHLATGDMLRSQIAK 43
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein
TrwB {Escherichia coli [TaxId: 562]}
Length = 433
Score = 27.2 bits (59), Expect = 3.6
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 3 PVMCDNERIRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVED 45
P+ D E L++ G G GKS +L+ + R + D
Sbjct: 43 PMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVD 85
>d1ynha1 d.126.1.7 (A:3-441) Succinylarginine dihydrolase
{Escherichia coli [TaxId: 562]}
Length = 439
Score = 27.0 bits (60), Expect = 4.0
Identities = 11/56 (19%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 305 ESFQSVKCYFEEIREQRQDFQLLECSAKDNYNIKEVFRTFLTLSQILTTNGDENSL 360
++F +R + F +E A ++ + T+L SQ+L+ + L
Sbjct: 263 QAFARQSQLLANLRARVNGFMAIEVPATQ-VSVSDTVSTYLFNSQLLSRDDGSMML 317
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 26.3 bits (57), Expect = 5.2
Identities = 21/164 (12%), Positives = 48/164 (29%), Gaps = 5/164 (3%)
Query: 13 LVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGNKSDM 72
++ G GKS +++ L + +V ++ E V ++
Sbjct: 5 YIVSAPSGAGKSSLIQALLKTQPLYDTQVSV--SHTTRQPRPGEVHGEHYFFVNHDEFKE 62
Query: 73 TSHHRAV-HLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHHRAVHLEDV 131
A +V Y + + ++ + I G + A + +
Sbjct: 63 MISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARSIFIL 122
Query: 132 SEWLYCELPKL--RYVDILDTCGDLQFPAMRRLSIATAHAFLLV 173
+L R D + A+ +S + +L+V
Sbjct: 123 PPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHYAEYDYLIV 166
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 26.0 bits (56), Expect = 5.8
Identities = 9/80 (11%), Positives = 20/80 (25%), Gaps = 1/80 (1%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGNKS 70
++++I G GK + + Y + S + L + + + G
Sbjct: 4 LKVMISGAPASGKGTQCEL-IKTKYQLAHISAGDLLRAEIAAGSENGKRAKEFMEKGQLV 62
Query: 71 DMTSHHRAVHLEDVSEWLYC 90
V
Sbjct: 63 PDEIVVNMVKERLRQPDAQE 82
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 26.1 bits (56), Expect = 6.3
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 11 IRLVILGGQGVGKSCILKR 29
+R V+LG G GK +
Sbjct: 4 VRAVLLGPPGAGKGTQAPK 22
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 341
Score = 26.2 bits (57), Expect = 7.2
Identities = 20/97 (20%), Positives = 37/97 (38%), Gaps = 6/97 (6%)
Query: 116 KSDMTSHHRAVHLEDVSEWLYCELPKLRYVDILDTCGDLQFPAMRRLSIATAHAFLLVYS 175
KS S + + EDV E ++++D+ G + F + ++ L+V
Sbjct: 69 KSTAISLYSEMSDEDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVD 128
Query: 176 TTCLESFQSVKCYFEEIREQRQDFQEIPIVVAGNKSD 212
T Q+ + + E+ + VV NK D
Sbjct: 129 TIEGVCVQTETVLRQALGERIKP------VVVINKVD 159
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 25.6 bits (55), Expect = 7.3
Identities = 22/125 (17%), Positives = 39/125 (31%), Gaps = 6/125 (4%)
Query: 11 IRLVILGGQGVGKSCILKRFLFNTYSDRYRSTVEDLYSRDFHVGAVTIKEIPIVVAGNKS 70
+R+++LG G GK + L ST +L+ R+ G E +
Sbjct: 1 MRVLLLGPPGAGKGTQAVK-LAEKLGIPQIST-GELFRRNIEEGTKLGVEAKRYL----D 54
Query: 71 DMTSHHRAVHLEDVSEWLYCELPKLRYVIQSSSFGDEIPIVVAGNKSDMTSHHRAVHLED 130
+ E V + L +++ E + + AV
Sbjct: 55 AGDLVPSDLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFR 114
Query: 131 VSEWL 135
VSE +
Sbjct: 115 VSEEV 119
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 25.7 bits (55), Expect = 8.4
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 11 IRLVILGGQGVGKSCILKR 29
+R+++LG GK +
Sbjct: 1 MRIILLGAPVAGKGTQAQF 19
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.324 0.136 0.405
Gapped
Lambda K H
0.267 0.0540 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,405,480
Number of extensions: 65207
Number of successful extensions: 476
Number of sequences better than 10.0: 1
Number of HSP's gapped: 433
Number of HSP's successfully gapped: 176
Length of query: 373
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 286
Effective length of database: 1,213,086
Effective search space: 346942596
Effective search space used: 346942596
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 54 (25.0 bits)