Query psy16676
Match_columns 461
No_of_seqs 487 out of 4247
Neff 9.6
Searched_HMMs 29240
Date Fri Aug 16 19:08:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16676.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16676hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 99.9 6.2E-25 2.1E-29 225.0 9.9 82 327-408 401-488 (510)
2 2rh1_A Beta-2-adrenergic recep 99.9 9.1E-22 3.1E-26 201.0 13.4 78 328-408 401-478 (500)
3 3eml_A Human adenosine A2A rec 99.8 1.5E-20 5E-25 191.0 16.2 84 326-409 386-469 (488)
4 3vw7_A Proteinase-activated re 99.8 2.6E-20 8.7E-25 189.1 15.5 83 326-408 381-466 (484)
5 4eiy_A Adenosine receptor A2A/ 99.8 9.5E-21 3.3E-25 190.2 11.3 87 324-410 343-429 (447)
6 3rze_A Histamine H1 receptor, 99.8 3E-20 1E-24 186.9 11.1 79 328-408 366-444 (452)
7 3v2y_A Sphingosine 1-phosphate 99.8 5.6E-20 1.9E-24 188.7 12.4 80 329-408 415-494 (520)
8 2ks9_A Substance-P receptor; w 99.8 6.5E-20 2.2E-24 179.2 12.2 130 236-408 192-323 (364)
9 3uon_A Human M2 muscarinic ace 99.8 7E-19 2.4E-23 177.6 18.9 79 328-408 381-459 (467)
10 2z73_A Rhodopsin; visual pigme 99.8 4.2E-19 1.4E-23 178.6 15.2 137 237-408 197-333 (448)
11 4grv_A Neurotensin receptor ty 99.8 4E-21 1.4E-25 196.7 -0.5 85 108-192 401-491 (510)
12 4amj_A Beta-1 adrenergic recep 99.8 2.6E-19 8.9E-24 170.8 12.0 133 233-408 170-302 (315)
13 3sn6_R Lysozyme, beta-2 adrene 99.8 5.7E-19 1.9E-23 180.9 14.8 151 233-407 341-491 (514)
14 3odu_A C-X-C chemokine recepto 99.8 2.6E-20 8.7E-25 190.0 3.0 83 327-409 405-495 (502)
15 3pbl_A D(3) dopamine receptor, 99.8 2.9E-19 9.9E-24 181.2 10.4 78 329-407 395-472 (481)
16 2lnl_A C-X-C chemokine recepto 99.8 3.7E-19 1.3E-23 168.8 9.9 121 233-408 167-295 (296)
17 4dkl_A MU-type opioid receptor 99.8 8.2E-19 2.8E-23 176.9 13.0 78 328-405 376-454 (464)
18 1u19_A Rhodopsin; G protein-co 99.8 4.2E-19 1.4E-23 172.1 8.9 126 236-408 200-325 (349)
19 4ea3_A Fusion protein of nocic 99.7 3.7E-18 1.3E-22 171.0 9.9 125 236-407 285-410 (434)
20 4eiy_A Adenosine receptor A2A/ 99.7 8.8E-17 3E-21 161.2 11.2 87 106-192 344-430 (447)
21 3eml_A Human adenosine A2A rec 99.7 2.9E-18 9.9E-23 174.0 -0.1 86 107-192 386-471 (488)
22 3vw7_A Proteinase-activated re 99.7 1E-17 3.4E-22 170.0 1.4 84 107-190 381-467 (484)
23 2rh1_A Beta-2-adrenergic recep 99.7 1.2E-16 4.2E-21 163.0 8.8 79 109-190 401-479 (500)
24 3v2y_A Sphingosine 1-phosphate 99.6 3.5E-16 1.2E-20 160.4 7.7 82 109-190 414-495 (520)
25 3uon_A Human M2 muscarinic ace 99.6 3.1E-17 1.1E-21 165.5 -0.9 80 109-190 381-460 (467)
26 3rze_A Histamine H1 receptor, 99.6 1.1E-16 3.7E-21 160.8 2.3 80 109-190 366-445 (452)
27 3odu_A C-X-C chemokine recepto 99.6 5.4E-18 1.9E-22 172.8 -8.6 84 108-191 405-496 (502)
28 4amj_A Beta-1 adrenergic recep 99.6 4.3E-15 1.5E-19 141.4 10.2 81 107-190 223-303 (315)
29 3pbl_A D(3) dopamine receptor, 99.6 1.1E-15 3.9E-20 154.7 6.3 79 110-189 395-473 (481)
30 4dkl_A MU-type opioid receptor 99.6 9E-16 3.1E-20 154.5 3.4 78 109-186 376-454 (464)
31 2z73_A Rhodopsin; visual pigme 99.6 1.4E-14 4.7E-19 145.5 11.9 83 106-189 251-333 (448)
32 3sn6_R Lysozyme, beta-2 adrene 99.5 1.2E-14 4E-19 148.8 11.2 81 107-190 413-493 (514)
33 2ks9_A Substance-P receptor; w 99.5 1.6E-14 5.4E-19 140.8 9.5 83 108-190 240-324 (364)
34 1u19_A Rhodopsin; G protein-co 99.5 9.3E-15 3.2E-19 141.3 6.4 82 108-190 245-326 (349)
35 2lnl_A C-X-C chemokine recepto 99.5 6.9E-14 2.4E-18 132.3 8.0 81 109-189 207-295 (296)
36 4ea3_A Fusion protein of nocic 99.4 1.4E-13 4.7E-18 137.7 6.6 81 108-188 329-410 (434)
37 2koe_A Human cannabinoid recep 98.9 3.1E-10 1.1E-14 72.2 1.8 37 371-407 2-38 (40)
38 2koe_A Human cannabinoid recep 98.7 2.2E-09 7.5E-14 68.1 1.4 37 152-188 2-38 (40)
39 2ki9_A Cannabinoid receptor 2; 98.5 1.2E-08 4.2E-13 61.4 -0.9 29 330-358 1-29 (33)
40 2ki9_A Cannabinoid receptor 2; 98.2 3.7E-08 1.3E-12 59.3 -2.5 29 111-139 1-29 (33)
41 2jx4_A Vasopressin V2 receptor 64.7 6.1 0.00021 25.6 3.2 14 260-273 2-15 (52)
42 2rdd_B UPF0092 membrane protei 62.2 9.8 0.00034 22.6 3.5 27 250-276 6-33 (37)
43 2ket_A Cathelicidin-6; antimic 42.9 14 0.00048 19.2 1.6 12 395-406 4-15 (27)
44 1jb0_I Photosystem 1 reaction 41.6 53 0.0018 19.5 4.2 26 238-263 9-34 (38)
45 3arc_M Photosystem II reaction 38.7 51 0.0017 19.3 3.7 23 241-263 7-29 (36)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.91 E-value=6.2e-25 Score=224.99 Aligned_cols=82 Identities=22% Similarity=0.515 Sum_probs=63.8
Q ss_pred HHhhhhHHHHHHHHHHHHHHhchhHHHHHHHHHhhCCCCCCh------hHHHHHHHHHHHHhhhhhHHHhhhcChHHHHH
Q psy16676 327 MKREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCP------DYVVAIFFWIGYFNSTLNPLIYAYFNRDFREA 400 (461)
Q Consensus 327 ~~~~~k~~r~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~~~------~~~~~~~~~l~~~ns~iNPiiY~~~~~~fR~~ 400 (461)
.++++|++||+++|+++|++||+||+++.++..+.+...... .+++.++.||+|+|||+|||||+++|++||++
T Consensus 401 ~~~erk~~k~L~iVv~~F~iCWlPf~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Y~NS~iNPiIY~~~n~~FR~a 480 (510)
T 4grv_A 401 VQALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALAYASSAINPILYNLVSANFRQV 480 (510)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 356789999999999999999999999999988875433222 34567788999999999999999999999999
Q ss_pred HHHhhhcc
Q psy16676 401 FKNTLQCA 408 (461)
Q Consensus 401 ~~~~~~~~ 408 (461)
|+++|+|+
T Consensus 481 Fk~iL~C~ 488 (510)
T 4grv_A 481 FLSTLACL 488 (510)
T ss_dssp --------
T ss_pred HHHHHhhc
Confidence 99999875
No 2
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.86 E-value=9.1e-22 Score=201.03 Aligned_cols=78 Identities=49% Similarity=0.872 Sum_probs=69.1
Q ss_pred HhhhhHHHHHHHHHHHHHHhchhHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHhhhhhHHHhhhcChHHHHHHHHhhhc
Q psy16676 328 KREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKNTLQC 407 (461)
Q Consensus 328 ~~~~k~~r~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~ 407 (461)
++++|++||+++|+++|++||+||+++.++..+.+. ..+..++.++.||+|+||++|||||++ |++||++|+++++|
T Consensus 401 ~~e~ka~ktl~ivv~~F~icWlP~~i~~l~~~~~~~--~~~~~~~~~~~~L~y~NS~iNPiIY~~-n~~FR~af~~il~~ 477 (500)
T 2rh1_A 401 LKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN--LIRKEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELLCL 477 (500)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT--SSCHHHHHHHHHHHHHGGGTHHHHGGG-SHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--cccHHHHHHHHHHHHHHHhhcchhhhc-cHHHHHHHHHHHhh
Confidence 367899999999999999999999999999888632 356778889999999999999999996 99999999999965
Q ss_pred c
Q psy16676 408 A 408 (461)
Q Consensus 408 ~ 408 (461)
+
T Consensus 478 ~ 478 (500)
T 2rh1_A 478 R 478 (500)
T ss_dssp -
T ss_pred h
Confidence 3
No 3
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.84 E-value=1.5e-20 Score=190.99 Aligned_cols=84 Identities=35% Similarity=0.731 Sum_probs=75.2
Q ss_pred HHHhhhhHHHHHHHHHHHHHHhchhHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHhhhhhHHHhhhcChHHHHHHHHhh
Q psy16676 326 KMKREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKNTL 405 (461)
Q Consensus 326 ~~~~~~k~~r~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~ 405 (461)
..++++|++||+++|+++|++||+||+++.++..+.+........+..+..+|+++|+++||+||++++++||++++++|
T Consensus 386 ~~~~~~r~~~~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~ 465 (488)
T 3eml_A 386 TLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKII 465 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccCccccccHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHHHH
Confidence 35678999999999999999999999999999888755445667788899999999999999999999999999999999
Q ss_pred hccc
Q psy16676 406 QCAF 409 (461)
Q Consensus 406 ~~~~ 409 (461)
+|++
T Consensus 466 ~~~~ 469 (488)
T 3eml_A 466 RSHV 469 (488)
T ss_dssp HHTT
T ss_pred hhcc
Confidence 8643
No 4
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.83 E-value=2.6e-20 Score=189.15 Aligned_cols=83 Identities=14% Similarity=0.293 Sum_probs=60.6
Q ss_pred HHHhhhhHHHHHHHHHHHHHHhchhHHHHHHHHHhhCCCCC---ChhHHHHHHHHHHHHhhhhhHHHhhhcChHHHHHHH
Q psy16676 326 KMKREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACD---CPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFK 402 (461)
Q Consensus 326 ~~~~~~k~~r~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~---~~~~~~~~~~~l~~~ns~iNPiiY~~~~~~fR~~~~ 402 (461)
..++++|++||+++|+++|++||+||+++.++..+....+. ....++.++.+|+|+||++|||||+++|++||++++
T Consensus 381 ~~~~~~r~~k~l~~v~~~F~icwlP~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~~~~ 460 (484)
T 3vw7_A 381 NRSKKSRALFLSAAVFCIFIICFGPTNVLLIAHYSFLSHTSTTEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYVY 460 (484)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTCTTCTTSHHHHHHHHHHHHHHTTHHHHHHHHHHHTSSCC-----
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccccchHHHHHhhHHHHHHHH
Confidence 34567899999999999999999999999998876533332 224566788899999999999999999999999999
Q ss_pred Hhhhcc
Q psy16676 403 NTLQCA 408 (461)
Q Consensus 403 ~~~~~~ 408 (461)
++|+|+
T Consensus 461 ~ll~~~ 466 (484)
T 3vw7_A 461 SILCCK 466 (484)
T ss_dssp ------
T ss_pred HHHhhc
Confidence 999764
No 5
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.83 E-value=9.5e-21 Score=190.23 Aligned_cols=87 Identities=33% Similarity=0.684 Sum_probs=75.8
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHhchhHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHhhhhhHHHhhhcChHHHHHHHH
Q psy16676 324 IIKMKREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKN 403 (461)
Q Consensus 324 ~~~~~~~~k~~r~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiiY~~~~~~fR~~~~~ 403 (461)
....++++|++||+++++++|++||+||+++.++..+.+........+..+..+|+++||++||+||++++++||+++++
T Consensus 343 ~~~~~~~~r~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~ 422 (447)
T 4eiy_A 343 RSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRK 422 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhhhhheeccHHHHHHHHHHhcCcccccchHHHHHHHHHHHHHhccchhhhHhccHHHHHHHHH
Confidence 33457788999999999999999999999999998887554455677888999999999999999999999999999999
Q ss_pred hhhcccc
Q psy16676 404 TLQCAFC 410 (461)
Q Consensus 404 ~~~~~~~ 410 (461)
+++|.++
T Consensus 423 ~~~~~~~ 429 (447)
T 4eiy_A 423 IIRSHVL 429 (447)
T ss_dssp HHHHTC-
T ss_pred HHHHHHh
Confidence 9986543
No 6
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.82 E-value=3e-20 Score=186.86 Aligned_cols=79 Identities=44% Similarity=1.051 Sum_probs=69.6
Q ss_pred HhhhhHHHHHHHHHHHHHHhchhHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHhhhhhHHHhhhcChHHHHHHHHhhhc
Q psy16676 328 KREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKNTLQC 407 (461)
Q Consensus 328 ~~~~k~~r~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~ 407 (461)
++++|++||+++|+++|++||+||+++.++..+.+.. ....+..+..+|+++|+++||+||++++++||++++++++|
T Consensus 366 ~~~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~~--~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~~ 443 (452)
T 3rze_A 366 NRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNC--CNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHI 443 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC--SCTTTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhccc--ccHHHHHHHHHHHHHHhcccchhhhhccHHHHHHHHHHHHh
Confidence 4788999999999999999999999999998886543 34556668889999999999999999999999999999986
Q ss_pred c
Q psy16676 408 A 408 (461)
Q Consensus 408 ~ 408 (461)
+
T Consensus 444 ~ 444 (452)
T 3rze_A 444 R 444 (452)
T ss_dssp -
T ss_pred c
Confidence 4
No 7
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.81 E-value=5.6e-20 Score=188.68 Aligned_cols=80 Identities=25% Similarity=0.497 Sum_probs=68.9
Q ss_pred hhhhHHHHHHHHHHHHHHhchhHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHhhhhhHHHhhhcChHHHHHHHHhhhcc
Q psy16676 329 REHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKNTLQCA 408 (461)
Q Consensus 329 ~~~k~~r~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~~ 408 (461)
+++|++||+++++++|++||+||+++.++..+.+...........++.+|+++|||+|||||++++++||++++++++|+
T Consensus 415 ~~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~ 494 (520)
T 3v2y_A 415 ENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMGRP 494 (520)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTTCSTTTSCHHHHHHHHHGGGTHHHHHHHHCHHHHHHHHTTCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 58899999999999999999999999999887654332344455677889999999999999999999999999999754
No 8
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.81 E-value=6.5e-20 Score=179.17 Aligned_cols=130 Identities=22% Similarity=0.492 Sum_probs=101.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCcccccCCCCCCCCCCCCCCcccCCccccccccCC
Q psy16676 236 SEFGNAIVSSSISFWIPCTIMVFTYLAIFKEANRQEKQLHSRHYGNQLLLGNHGRDASYSNSNGDLAVGAGKLTLEDAHH 315 (461)
Q Consensus 236 ~~~~y~i~~~~~~f~iP~iii~~~Y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (461)
....|.++..++.+++|+++|+++|.+|++.++++......
T Consensus 192 ~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~~~~~~--------------------------------------- 232 (364)
T 2ks9_A 192 YEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDS--------------------------------------- 232 (364)
T ss_dssp THHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSCCCSSSS---------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc---------------------------------------
Confidence 44678888899999999999999999999988653211000
Q ss_pred CCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhchhHHHHHHHHHhhCCCC--CChhHHHHHHHHHHHHhhhhhHHHhhhc
Q psy16676 316 STPTKDRNIIKMKREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDAC--DCPDYVVAIFFWIGYFNSTLNPLIYAYF 393 (461)
Q Consensus 316 ~~~~~~~~~~~~~~~~k~~r~l~~vv~~F~icw~P~~v~~l~~~~~~~~~--~~~~~~~~~~~~l~~~ns~iNPiiY~~~ 393 (461)
........++++|++||+++++++|++||+|+.++.++..+.+... .....++.+..+++++||++||+||+++
T Consensus 233 ----~~~~~~~~~~~~k~~~~~~~v~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~ 308 (364)
T 2ks9_A 233 ----SDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCL 308 (364)
T ss_dssp ----SSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----chhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001123467789999999999999999999999998887754321 2234566778899999999999999999
Q ss_pred ChHHHHHHHHhhhcc
Q psy16676 394 NRDFREAFKNTLQCA 408 (461)
Q Consensus 394 ~~~fR~~~~~~~~~~ 408 (461)
+++||++++++++|+
T Consensus 309 ~~~fR~~~~~~~~~~ 323 (364)
T 2ks9_A 309 NDRFRLGFKHAFRCC 323 (364)
T ss_dssp CHHHHHHHHHHHSSS
T ss_pred hHHHHHHHHHHHhhc
Confidence 999999999999753
No 9
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.81 E-value=7e-19 Score=177.61 Aligned_cols=79 Identities=38% Similarity=0.753 Sum_probs=69.8
Q ss_pred HhhhhHHHHHHHHHHHHHHhchhHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHhhhhhHHHhhhcChHHHHHHHHhhhc
Q psy16676 328 KREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKNTLQC 407 (461)
Q Consensus 328 ~~~~k~~r~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~ 407 (461)
++++|++||+++|+++|++||+||.++.++..+... .....++.+..+|+++|+++||+||++++++||++++++|+|
T Consensus 381 ~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~--~~~~~~~~i~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c 458 (467)
T 3uon_A 381 SREKKVTRTILAILLAFIITWAPYNVMVLINTFCAP--CIPNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLLMC 458 (467)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCST--TSCHHHHHHHHHHHHHTTTHHHHHHHHHCHHHHHHHHHHCC-
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhc--ccchHHHHHHHHHHHHhhhhhhHHHHHcCHHHHHHHHHHHhh
Confidence 357899999999999999999999999999888643 245778889999999999999999999999999999999975
Q ss_pred c
Q psy16676 408 A 408 (461)
Q Consensus 408 ~ 408 (461)
+
T Consensus 459 ~ 459 (467)
T 3uon_A 459 H 459 (467)
T ss_dssp -
T ss_pred h
Confidence 4
No 10
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.80 E-value=4.2e-19 Score=178.58 Aligned_cols=137 Identities=19% Similarity=0.316 Sum_probs=107.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCcccccCCCCCCCCCCCCCCcccCCccccccccCCC
Q psy16676 237 EFGNAIVSSSISFWIPCTIMVFTYLAIFKEANRQEKQLHSRHYGNQLLLGNHGRDASYSNSNGDLAVGAGKLTLEDAHHS 316 (461)
Q Consensus 237 ~~~y~i~~~~~~f~iP~iii~~~Y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (461)
...|.++.+++.+++|+++|+++|++|++.++++.++...... +..
T Consensus 197 ~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~----------------------------------~~~ 242 (448)
T 2z73_A 197 TRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAK----------------------------------RLN 242 (448)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHT----------------------------------TTC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------------------------------hhh
Confidence 4567778888889999999999999999999998877654320 000
Q ss_pred CCcchhhHHHHHhhhhHHHHHHHHHHHHHHhchhHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHhhhhhHHHhhhcChH
Q psy16676 317 TPTKDRNIIKMKREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCPDYVVAIFFWIGYFNSTLNPLIYAYFNRD 396 (461)
Q Consensus 317 ~~~~~~~~~~~~~~~k~~r~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiiY~~~~~~ 396 (461)
....++.....++++|++|++++++++|++||+|+.++.++..+.... ........+..+++++|+++||+||++++++
T Consensus 243 ~~~~~~~~~~~~~~~k~~~~l~~iv~~F~i~~~P~~i~~~~~~~~~~~-~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~ 321 (448)
T 2z73_A 243 AKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLE-WVTPYAAQLPVMFAKASAIHNPMIYSVSHPK 321 (448)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGG-GCCHHHHHHHHHHHHHGGGSHHHHHHHHCHH
T ss_pred hHHHHhhhccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCcc-cCChHHHHHHHHHHHHHHhhcchHHHHhhHH
Confidence 111122233456788999999999999999999999999888775322 2345666778899999999999999999999
Q ss_pred HHHHHHHhhhcc
Q psy16676 397 FREAFKNTLQCA 408 (461)
Q Consensus 397 fR~~~~~~~~~~ 408 (461)
||+++++++++.
T Consensus 322 fR~~~~~~~~~~ 333 (448)
T 2z73_A 322 FREAISQTFPWV 333 (448)
T ss_dssp HHHHHHHHCGGG
T ss_pred HHHHHHHHHHHH
Confidence 999999999754
No 11
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.79 E-value=4e-21 Score=196.69 Aligned_cols=85 Identities=21% Similarity=0.471 Sum_probs=62.9
Q ss_pred HHhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCC------chhHHHHHHHHHHHhhhHHHHHHHhccHHHHHH
Q psy16676 108 MKREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDC------PDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREA 181 (461)
Q Consensus 108 ~~~~~k~~~~~~~i~~~F~icw~P~~i~~~~~~~~~~~~~~------~~~~~~~~~~l~~~ns~~NP~iY~~~~~~fr~~ 181 (461)
.++++|++||+++|+++|++||+||+++.++..+.+..... ..+++.++.||+|+|||+||+||+++|++||++
T Consensus 401 ~~~erk~~k~L~iVv~~F~iCWlPf~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Y~NS~iNPiIY~~~n~~FR~a 480 (510)
T 4grv_A 401 VQALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALAYASSAINPILYNLVSANFRQV 480 (510)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 45688999999999999999999999999998876533221 134556778999999999999999999999999
Q ss_pred HHHhccccccc
Q psy16676 182 FKNTLQCAFCS 192 (461)
Q Consensus 182 ~~~~~~~~~~~ 192 (461)
|+++|+|+|+.
T Consensus 481 Fk~iL~C~C~~ 491 (510)
T 4grv_A 481 FLSTLACLCPG 491 (510)
T ss_dssp -----------
T ss_pred HHHHHhhcCCC
Confidence 99999876543
No 12
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.79 E-value=2.6e-19 Score=170.81 Aligned_cols=133 Identities=43% Similarity=0.797 Sum_probs=103.2
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCcccccCCCCCCCCCCCCCCcccCCccccccc
Q psy16676 233 RTSSEFGNAIVSSSISFWIPCTIMVFTYLAIFKEANRQEKQLHSRHYGNQLLLGNHGRDASYSNSNGDLAVGAGKLTLED 312 (461)
Q Consensus 233 ~~~~~~~y~i~~~~~~f~iP~iii~~~Y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (461)
+......|.+...++.+++|+++|+++|.+|++.++++.++.....
T Consensus 170 ~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~~~~~---------------------------------- 215 (315)
T 4amj_A 170 DFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRAS---------------------------------- 215 (315)
T ss_dssp CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC------------------------------------------
T ss_pred hhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccc----------------------------------
Confidence 4456678999999999999999999999999999988765433211
Q ss_pred cCCCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhchhHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHhhhhhHHHhhh
Q psy16676 313 AHHSTPTKDRNIIKMKREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCPDYVVAIFFWIGYFNSTLNPLIYAY 392 (461)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~k~~r~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiiY~~ 392 (461)
.....+...++++|+++++++++++|++||+|+.+..++..+.... .......+..+++++||++||+||+
T Consensus 216 ------~~~~~~~~~~~~~k~~~~~~~~~~~f~i~~~P~~i~~~~~~~~~~~--~~~~~~~~~~~l~~~ns~~nPiiY~- 286 (315)
T 4amj_A 216 ------KRKTSRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDL--VPDWLFVAFNWLGYANSAMNPIIYC- 286 (315)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTS--SCHHHHHHHHHHHHHGGGTHHHHGG-
T ss_pred ------ccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc--chHHHHHHHHHHHHHhccccHHHHc-
Confidence 1112223445788999999999999999999999999988775332 4466777888999999999999999
Q ss_pred cChHHHHHHHHhhhcc
Q psy16676 393 FNRDFREAFKNTLQCA 408 (461)
Q Consensus 393 ~~~~fR~~~~~~~~~~ 408 (461)
++++||++++++++|.
T Consensus 287 ~~~~fR~~~~~~l~~~ 302 (315)
T 4amj_A 287 RSPDFRKAFKRLLAFP 302 (315)
T ss_dssp GSHHHHHHHHHHHC--
T ss_pred CcHHHHHHHHHHhCCC
Confidence 8999999999999753
No 13
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.79 E-value=5.7e-19 Score=180.92 Aligned_cols=151 Identities=38% Similarity=0.597 Sum_probs=106.8
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCcccccCCCCCCCCCCCCCCcccCCccccccc
Q psy16676 233 RTSSEFGNAIVSSSISFWIPCTIMVFTYLAIFKEANRQEKQLHSRHYGNQLLLGNHGRDASYSNSNGDLAVGAGKLTLED 312 (461)
Q Consensus 233 ~~~~~~~y~i~~~~~~f~iP~iii~~~Y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (461)
+......|.++.+++.|++|+++|+++|.+|++.+|++.++.............. ....
T Consensus 341 ~~~~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~---------------------~~~~ 399 (514)
T 3sn6_R 341 DFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVQNLS---------------------QVEQ 399 (514)
T ss_dssp CCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------------------------------
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccc---------------------cccc
Confidence 3445678999999999999999999999999999999887765433110000000 0000
Q ss_pred cCCCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhchhHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHhhhhhHHHhhh
Q psy16676 313 AHHSTPTKDRNIIKMKREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCPDYVVAIFFWIGYFNSTLNPLIYAY 392 (461)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~k~~r~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiiY~~ 392 (461)
........++.....++++|+++|+++++++|++||+||.++.++..+... .....+..+..+|+++||++||+||+
T Consensus 400 ~~~~~~~~~~~~~~~~~~~r~~~~l~~iv~~F~lcwlP~~i~~~~~~~~~~--~~~~~~~~~~~~l~~~ns~~NPiIY~- 476 (514)
T 3sn6_R 400 DGRTGHGLRRSSKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN--LIRKEVYILLNWIGYVNSGFNPLIYC- 476 (514)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT--SSCHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred cccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc--ccchHHHHHHHHHHHHHHhhhHHhhc-
Confidence 000011111222334678899999999999999999999999988877532 24566778888999999999999999
Q ss_pred cChHHHHHHHHhhhc
Q psy16676 393 FNRDFREAFKNTLQC 407 (461)
Q Consensus 393 ~~~~fR~~~~~~~~~ 407 (461)
++++||++++++++|
T Consensus 477 ~~~~fR~~~~~~l~~ 491 (514)
T 3sn6_R 477 RSPDFRIAFQELLCL 491 (514)
T ss_dssp TCHHHHHHHHTTCC-
T ss_pred CCHHHHHHHHHHhCc
Confidence 899999999999864
No 14
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.78 E-value=2.6e-20 Score=190.05 Aligned_cols=83 Identities=24% Similarity=0.490 Sum_probs=69.0
Q ss_pred HHhhhhHHHHHHHHHHHHHHhchhHHHHHHHHHhhCCCC--------CChhHHHHHHHHHHHHhhhhhHHHhhhcChHHH
Q psy16676 327 MKREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDAC--------DCPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFR 398 (461)
Q Consensus 327 ~~~~~k~~r~l~~vv~~F~icw~P~~v~~l~~~~~~~~~--------~~~~~~~~~~~~l~~~ns~iNPiiY~~~~~~fR 398 (461)
.++++|++||+++|+++|++||+||+++.++..+..... .....++.++.+|+++||++|||||++++++||
T Consensus 405 ~~~~~k~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR 484 (502)
T 3odu_A 405 GHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFK 484 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTTTCCCC
T ss_pred hHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHhcccchhhhhhcCHHHH
Confidence 355789999999999999999999999998887652211 122445568889999999999999999999999
Q ss_pred HHHHHhhhccc
Q psy16676 399 EAFKNTLQCAF 409 (461)
Q Consensus 399 ~~~~~~~~~~~ 409 (461)
++++++|+|++
T Consensus 485 ~~~~~ll~~~~ 495 (502)
T 3odu_A 485 TSAQHALTSGR 495 (502)
T ss_dssp CCHHHHHSSCS
T ss_pred HHHHHHhccCC
Confidence 99999998643
No 15
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.78 E-value=2.9e-19 Score=181.21 Aligned_cols=78 Identities=46% Similarity=0.998 Sum_probs=70.6
Q ss_pred hhhhHHHHHHHHHHHHHHhchhHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHhhhhhHHHhhhcChHHHHHHHHhhhc
Q psy16676 329 REHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKNTLQC 407 (461)
Q Consensus 329 ~~~k~~r~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~ 407 (461)
+++|++||+++|+++|++||+||+++.++..+.+ .......++.+..+|+++|+++|||||++++++||++++++|+|
T Consensus 395 ~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~-~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c 472 (481)
T 3pbl_A 395 REKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQ-TCHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSC 472 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC
T ss_pred hhhhHHHHHHHHHHHHHHHhhHHHHHHHHHhccc-cccCcHHHHHHHHHHHHHhhccchHHHHHcCHHHHHHHHHHHhc
Confidence 5889999999999999999999999999887763 33456778889999999999999999999999999999999975
No 16
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.78 E-value=3.7e-19 Score=168.82 Aligned_cols=121 Identities=25% Similarity=0.484 Sum_probs=98.7
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCcccccCCCCCCCCCCCCCCcccCCccccccc
Q psy16676 233 RTSSEFGNAIVSSSISFWIPCTIMVFTYLAIFKEANRQEKQLHSRHYGNQLLLGNHGRDASYSNSNGDLAVGAGKLTLED 312 (461)
Q Consensus 233 ~~~~~~~y~i~~~~~~f~iP~iii~~~Y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (461)
.......|.++...+.+++|++++.++|.++.+.++++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~~----------------------------------------- 205 (296)
T 2lnl_A 167 TAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAH----------------------------------------- 205 (296)
T ss_dssp TTTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSSCC-----------------------------------------
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------------------------
Confidence 344556788888999999999999999998876553221
Q ss_pred cCCCCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhchhHHHHHHHHHhhCCCCCCh--------hHHHHHHHHHHHHhhh
Q psy16676 313 AHHSTPTKDRNIIKMKREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCP--------DYVVAIFFWIGYFNST 384 (461)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~k~~r~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~~~--------~~~~~~~~~l~~~ns~ 384 (461)
.++++|++||+++++++|++||+||+++.++..+........ .....++.+|+++||+
T Consensus 206 --------------~~~~~k~~~~~~~v~~~f~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~ 271 (296)
T 2lnl_A 206 --------------MGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSC 271 (296)
T ss_dssp --------------CHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCSCHHHHHHHTTHHHHHHHHHGGGGGT
T ss_pred --------------hhhhhhHHHHHHHhhhheeeeehHHHHHHHHHHHhccccCCcchhhhhHHHHHHHHHHHHHHHHHH
Confidence 145679999999999999999999999999988764332211 3456778899999999
Q ss_pred hhHHHhhhcChHHHHHHHHhhhcc
Q psy16676 385 LNPLIYAYFNRDFREAFKNTLQCA 408 (461)
Q Consensus 385 iNPiiY~~~~~~fR~~~~~~~~~~ 408 (461)
+||+||+++|++||++++++++|+
T Consensus 272 ~NPiIY~~~~~~fR~~~~~ll~cr 295 (296)
T 2lnl_A 272 LNPIIYAFIGQNFRHGFLKILAMH 295 (296)
T ss_dssp HHHHHHHHHCSHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCHHHHHHHHHHhcCC
Confidence 999999999999999999999763
No 17
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.78 E-value=8.2e-19 Score=176.87 Aligned_cols=78 Identities=24% Similarity=0.596 Sum_probs=67.3
Q ss_pred HhhhhHHHHHHHHHHHHHHhchhHHHHHHHHHhhCCCC-CChhHHHHHHHHHHHHhhhhhHHHhhhcChHHHHHHHHhh
Q psy16676 328 KREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDAC-DCPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKNTL 405 (461)
Q Consensus 328 ~~~~k~~r~l~~vv~~F~icw~P~~v~~l~~~~~~~~~-~~~~~~~~~~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~ 405 (461)
++++|++||+++|+++|++||+||+++.++..+..... ......+.++.+|+++||++||+||++++++||+++++++
T Consensus 376 ~~~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~lc 454 (464)
T 4dkl_A 376 RNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFC 454 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCccccchhHHHHHHHHHHhhhchhHHHHHHhhHHHHHHHHHHh
Confidence 56789999999999999999999999999988764322 2335566788899999999999999999999999999974
No 18
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.77 E-value=4.2e-19 Score=172.12 Aligned_cols=126 Identities=22% Similarity=0.383 Sum_probs=101.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCcccccCCCCCCCCCCCCCCcccCCccccccccCC
Q psy16676 236 SEFGNAIVSSSISFWIPCTIMVFTYLAIFKEANRQEKQLHSRHYGNQLLLGNHGRDASYSNSNGDLAVGAGKLTLEDAHH 315 (461)
Q Consensus 236 ~~~~y~i~~~~~~f~iP~iii~~~Y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (461)
....|.++..++.+++|+++|+++|.+|++.+|++.++..
T Consensus 200 ~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~---------------------------------------- 239 (349)
T 1u19_A 200 NNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQ---------------------------------------- 239 (349)
T ss_dssp THHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSSC----------------------------------------
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc----------------------------------------
Confidence 4567888888999999999999999999998865432100
Q ss_pred CCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhchhHHHHHHHHHhhCCCCCChhHHHHHHHHHHHHhhhhhHHHhhhcCh
Q psy16676 316 STPTKDRNIIKMKREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCPDYVVAIFFWIGYFNSTLNPLIYAYFNR 395 (461)
Q Consensus 316 ~~~~~~~~~~~~~~~~k~~r~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~~~~~~~~~~~~l~~~ns~iNPiiY~~~~~ 395 (461)
......++++|+++++++++++|++||+|+.+..++..+... .........+..+++++||++||+||+++++
T Consensus 240 ------~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~-~~~~~~~~~~~~~l~~~ns~~nPiiY~~~~~ 312 (349)
T 1u19_A 240 ------ESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQG-SDFGPIFMTIPAFFAKTSAVYNPVIYIMMNK 312 (349)
T ss_dssp ------SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-SCCCHHHHHHHHHHGGGGGTHHHHHHHHTCH
T ss_pred ------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhheecCC-cccchHHHHHHHHHHHHHHHHhHHHHHHHhH
Confidence 011234567799999999999999999999999888776533 2344566778889999999999999999999
Q ss_pred HHHHHHHHhhhcc
Q psy16676 396 DFREAFKNTLQCA 408 (461)
Q Consensus 396 ~fR~~~~~~~~~~ 408 (461)
+||++++++++|.
T Consensus 313 ~fR~~~~~~~~c~ 325 (349)
T 1u19_A 313 QFRNCMVTTLCCG 325 (349)
T ss_dssp HHHHHHHHHHTSS
T ss_pred HHHHHHHHHhccc
Confidence 9999999999753
No 19
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.74 E-value=3.7e-18 Score=171.05 Aligned_cols=125 Identities=19% Similarity=0.363 Sum_probs=95.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCcccccCCCCCCCCCCCCCCcccCCccccccccCC
Q psy16676 236 SEFGNAIVSSSISFWIPCTIMVFTYLAIFKEANRQEKQLHSRHYGNQLLLGNHGRDASYSNSNGDLAVGAGKLTLEDAHH 315 (461)
Q Consensus 236 ~~~~y~i~~~~~~f~iP~iii~~~Y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (461)
....|.++.+++.+++|+++|+++|.+|++.+|++.+.
T Consensus 285 ~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~------------------------------------------ 322 (434)
T 4ea3_A 285 WGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLL------------------------------------------ 322 (434)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCSSC------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc------------------------------------------
Confidence 34568888899999999999999999999988653211
Q ss_pred CCCcchhhHHHHHhhhhHHHHHHHHHHHHHHhchhHHHHHHHHHhhCCCCC-ChhHHHHHHHHHHHHhhhhhHHHhhhcC
Q psy16676 316 STPTKDRNIIKMKREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACD-CPDYVVAIFFWIGYFNSTLNPLIYAYFN 394 (461)
Q Consensus 316 ~~~~~~~~~~~~~~~~k~~r~l~~vv~~F~icw~P~~v~~l~~~~~~~~~~-~~~~~~~~~~~l~~~ns~iNPiiY~~~~ 394 (461)
.......++++|+++++++++++|++||+|+.++.++..+...... ....+..++.+++++|+++||+||++++
T Consensus 323 -----~~~~~~~~~~~~~~~~~~~vv~~F~i~w~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~~~ 397 (434)
T 4ea3_A 323 -----SGSREKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSETAVAILRFCTALGYVNSCLNPILYAFLD 397 (434)
T ss_dssp -----SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred -----ccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0112234667899999999999999999999999988776532211 1234556777899999999999999999
Q ss_pred hHHHHHHHHhhhc
Q psy16676 395 RDFREAFKNTLQC 407 (461)
Q Consensus 395 ~~fR~~~~~~~~~ 407 (461)
++||++++++++|
T Consensus 398 ~~fR~~~~~~~~~ 410 (434)
T 4ea3_A 398 ENFKACFRKFCCA 410 (434)
T ss_dssp HHHHHHHC-----
T ss_pred HHHHHHHHHHhCc
Confidence 9999999998754
No 20
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.68 E-value=8.8e-17 Score=161.23 Aligned_cols=87 Identities=33% Similarity=0.693 Sum_probs=74.7
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHhhhHHHHHHHhccHHHHHHHHHh
Q psy16676 106 IKMKREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKNT 185 (461)
Q Consensus 106 ~~~~~~~k~~~~~~~i~~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NP~iY~~~~~~fr~~~~~~ 185 (461)
...++++|++||+++++++|++||+|++++.++..+.........+...++.+|+++||++||+||++++++||++++++
T Consensus 344 ~~~~~~~r~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~ 423 (447)
T 4eiy_A 344 STLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKI 423 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhhheeccHHHHHHHHHHhcCcccccchHHHHHHHHHHHHHhccchhhhHhccHHHHHHHHHH
Confidence 34567899999999999999999999999999888765434556677888899999999999999999999999999999
Q ss_pred ccccccc
Q psy16676 186 LQCAFCS 192 (461)
Q Consensus 186 ~~~~~~~ 192 (461)
++|.+++
T Consensus 424 ~~~~~~r 430 (447)
T 4eiy_A 424 IRSHVLR 430 (447)
T ss_dssp HHHTC--
T ss_pred HHHHHhc
Confidence 9876543
No 21
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.68 E-value=2.9e-18 Score=173.99 Aligned_cols=86 Identities=34% Similarity=0.708 Sum_probs=75.6
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHhhhHHHHHHHhccHHHHHHHHHhc
Q psy16676 107 KMKREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKNTL 186 (461)
Q Consensus 107 ~~~~~~k~~~~~~~i~~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NP~iY~~~~~~fr~~~~~~~ 186 (461)
..++++|+++|+++|+++|++||+||+++.++..+.........++..++.+|+++|+++||+||++++++||+++++++
T Consensus 386 ~~~~~~r~~~~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~ 465 (488)
T 3eml_A 386 TLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKII 465 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccCccccccHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHHHH
Confidence 35678999999999999999999999999999888754445567778888999999999999999999999999999999
Q ss_pred cccccc
Q psy16676 187 QCAFCS 192 (461)
Q Consensus 187 ~~~~~~ 192 (461)
+|++++
T Consensus 466 ~~~~~~ 471 (488)
T 3eml_A 466 RSHVLR 471 (488)
T ss_dssp HHTTSC
T ss_pred hhcccc
Confidence 876543
No 22
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.66 E-value=1e-17 Score=169.99 Aligned_cols=84 Identities=14% Similarity=0.270 Sum_probs=59.7
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCC---chhHHHHHHHHHHHhhhHHHHHHHhccHHHHHHHH
Q psy16676 107 KMKREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDC---PDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFK 183 (461)
Q Consensus 107 ~~~~~~k~~~~~~~i~~~F~icw~P~~i~~~~~~~~~~~~~~---~~~~~~~~~~l~~~ns~~NP~iY~~~~~~fr~~~~ 183 (461)
..++++|++||+++|+++|++||+||+++.++..+....... ....+.++.+|+++||++||+||++++++||++++
T Consensus 381 ~~~~~~r~~k~l~~v~~~F~icwlP~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~~~~ 460 (484)
T 3vw7_A 381 NRSKKSRALFLSAAVFCIFIICFGPTNVLLIAHYSFLSHTSTTEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYVY 460 (484)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTCTTCTTSHHHHHHHHHHHHHHTTHHHHHHHHHHHTSSCC-----
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccccchHHHHHhhHHHHHHHH
Confidence 345678999999999999999999999999988765332222 23556678899999999999999999999999999
Q ss_pred Hhccccc
Q psy16676 184 NTLQCAF 190 (461)
Q Consensus 184 ~~~~~~~ 190 (461)
++++|++
T Consensus 461 ~ll~~~~ 467 (484)
T 3vw7_A 461 SILCCKE 467 (484)
T ss_dssp -------
T ss_pred HHHhhcc
Confidence 9987654
No 23
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.65 E-value=1.2e-16 Score=162.98 Aligned_cols=79 Identities=48% Similarity=0.830 Sum_probs=68.9
Q ss_pred HhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHhhhHHHHHHHhccHHHHHHHHHhccc
Q psy16676 109 KREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKNTLQC 188 (461)
Q Consensus 109 ~~~~k~~~~~~~i~~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NP~iY~~~~~~fr~~~~~~~~~ 188 (461)
++|+|++||+++|+++|++||+||+++.++..+.. ...+..++.++.||+|+||++||+||++ +++||++|+++++|
T Consensus 401 ~~e~ka~ktl~ivv~~F~icWlP~~i~~l~~~~~~--~~~~~~~~~~~~~L~y~NS~iNPiIY~~-n~~FR~af~~il~~ 477 (500)
T 2rh1_A 401 LKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQD--NLIRKEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELLCL 477 (500)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST--TSSCHHHHHHHHHHHHHGGGTHHHHGGG-SHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CcccHHHHHHHHHHHHHHHhhcchhhhc-cHHHHHHHHHHHhh
Confidence 36889999999999999999999999999988763 3445678888999999999999999996 99999999999976
Q ss_pred cc
Q psy16676 189 AF 190 (461)
Q Consensus 189 ~~ 190 (461)
+.
T Consensus 478 ~~ 479 (500)
T 2rh1_A 478 RR 479 (500)
T ss_dssp --
T ss_pred hc
Confidence 54
No 24
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.62 E-value=3.5e-16 Score=160.36 Aligned_cols=82 Identities=24% Similarity=0.493 Sum_probs=69.6
Q ss_pred HhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHhhhHHHHHHHhccHHHHHHHHHhccc
Q psy16676 109 KREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKNTLQC 188 (461)
Q Consensus 109 ~~~~k~~~~~~~i~~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NP~iY~~~~~~fr~~~~~~~~~ 188 (461)
++++|+++|+++++++|++||+||+++.++..+.............++.+++++|||+||+||++++++||++++++++|
T Consensus 414 ~~~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~ 493 (520)
T 3v2y_A 414 SENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMGR 493 (520)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTTCSTTTSCHHHHHHHHHGGGTHHHHHHHHCHHHHHHHHTTCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 35889999999999999999999999999887764333233445566778999999999999999999999999999986
Q ss_pred cc
Q psy16676 189 AF 190 (461)
Q Consensus 189 ~~ 190 (461)
++
T Consensus 494 ~~ 495 (520)
T 3v2y_A 494 PL 495 (520)
T ss_dssp CC
T ss_pred hc
Confidence 54
No 25
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.61 E-value=3.1e-17 Score=165.46 Aligned_cols=80 Identities=38% Similarity=0.754 Sum_probs=69.4
Q ss_pred HhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHhhhHHHHHHHhccHHHHHHHHHhccc
Q psy16676 109 KREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKNTLQC 188 (461)
Q Consensus 109 ~~~~k~~~~~~~i~~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NP~iY~~~~~~fr~~~~~~~~~ 188 (461)
++++|++||+++++++|++||+||+++.++..+.. .......+.++.+|+++|+++||+||++++++||++++++++|
T Consensus 381 ~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~--~~~~~~~~~i~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c 458 (467)
T 3uon_A 381 SREKKVTRTILAILLAFIITWAPYNVMVLINTFCA--PCIPNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLLMC 458 (467)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCS--TTSCHHHHHHHHHHHHHTTTHHHHHHHHHCHHHHHHHHHHCC-
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHh--cccchHHHHHHHHHHHHhhhhhhHHHHHcCHHHHHHHHHHHhh
Confidence 35789999999999999999999999999888754 2345778888899999999999999999999999999999976
Q ss_pred cc
Q psy16676 189 AF 190 (461)
Q Consensus 189 ~~ 190 (461)
++
T Consensus 459 ~~ 460 (467)
T 3uon_A 459 HY 460 (467)
T ss_dssp --
T ss_pred hc
Confidence 54
No 26
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.61 E-value=1.1e-16 Score=160.80 Aligned_cols=80 Identities=44% Similarity=1.011 Sum_probs=68.7
Q ss_pred HhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHhhhHHHHHHHhccHHHHHHHHHhccc
Q psy16676 109 KREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKNTLQC 188 (461)
Q Consensus 109 ~~~~k~~~~~~~i~~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NP~iY~~~~~~fr~~~~~~~~~ 188 (461)
++++|+++|+++++++|++||+||+++.++..+... ........++.+|+++|+++||+||++++++||++++++++|
T Consensus 366 ~~~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~--~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~~ 443 (452)
T 3rze_A 366 NRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKN--CCNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHI 443 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC--CSCTTTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcc--cccHHHHHHHHHHHHHHhcccchhhhhccHHHHHHHHHHHHh
Confidence 478899999999999999999999999998877543 233456668889999999999999999999999999999987
Q ss_pred cc
Q psy16676 189 AF 190 (461)
Q Consensus 189 ~~ 190 (461)
++
T Consensus 444 ~~ 445 (452)
T 3rze_A 444 RS 445 (452)
T ss_dssp --
T ss_pred cc
Confidence 65
No 27
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.59 E-value=5.4e-18 Score=172.77 Aligned_cols=84 Identities=24% Similarity=0.472 Sum_probs=68.7
Q ss_pred HHhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCC--------CCchhHHHHHHHHHHHhhhHHHHHHHhccHHHH
Q psy16676 108 MKREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDAC--------DCPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFR 179 (461)
Q Consensus 108 ~~~~~k~~~~~~~i~~~F~icw~P~~i~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~ns~~NP~iY~~~~~~fr 179 (461)
.++++|+++|+++|+++|++||+||+++.++..+..... .....++.++.+|+++||++||+||++++++||
T Consensus 405 ~~~~~k~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR 484 (502)
T 3odu_A 405 GHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFK 484 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTTTCCCC
T ss_pred hHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHhcccchhhhhhcCHHHH
Confidence 456899999999999999999999999888876542111 112344567888999999999999999999999
Q ss_pred HHHHHhcccccc
Q psy16676 180 EAFKNTLQCAFC 191 (461)
Q Consensus 180 ~~~~~~~~~~~~ 191 (461)
++++++++|+.|
T Consensus 485 ~~~~~ll~~~~~ 496 (502)
T 3odu_A 485 TSAQHALTSGRP 496 (502)
T ss_dssp CCHHHHHSSCSS
T ss_pred HHHHHHhccCCc
Confidence 999999986554
No 28
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.58 E-value=4.3e-15 Score=141.38 Aligned_cols=81 Identities=49% Similarity=0.927 Sum_probs=67.6
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHhhhHHHHHHHhccHHHHHHHHHhc
Q psy16676 107 KMKREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKNTL 186 (461)
Q Consensus 107 ~~~~~~k~~~~~~~i~~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NP~iY~~~~~~fr~~~~~~~ 186 (461)
..++++|+++++++++++|++||+|+++..++..+.. ...+.....+..+++++||++||+||+ ++++||+++++++
T Consensus 223 ~~~~~~k~~~~~~~~~~~f~i~~~P~~i~~~~~~~~~--~~~~~~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~~~~l 299 (315)
T 4amj_A 223 MLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNR--DLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLL 299 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT--TSSCHHHHHHHHHHHHHGGGTHHHHGG-GSHHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--ccchHHHHHHHHHHHHHhccccHHHHc-CcHHHHHHHHHHh
Confidence 3456889999999999999999999999988877653 234456777788899999999999999 8999999999999
Q ss_pred cccc
Q psy16676 187 QCAF 190 (461)
Q Consensus 187 ~~~~ 190 (461)
+|..
T Consensus 300 ~~~~ 303 (315)
T 4amj_A 300 AFPR 303 (315)
T ss_dssp C---
T ss_pred CCCC
Confidence 7643
No 29
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.57 E-value=1.1e-15 Score=154.67 Aligned_cols=79 Identities=46% Similarity=0.987 Sum_probs=69.9
Q ss_pred hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHhhhHHHHHHHhccHHHHHHHHHhcccc
Q psy16676 110 REHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKNTLQCA 189 (461)
Q Consensus 110 ~~~k~~~~~~~i~~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NP~iY~~~~~~fr~~~~~~~~~~ 189 (461)
+++|+++|+++++++|++||+||+++.++..+.. ........+.++.+|+++|+++||+||++++++||++++++++|+
T Consensus 395 ~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~-~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c~ 473 (481)
T 3pbl_A 395 REKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQ-TCHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSCG 473 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC-
T ss_pred hhhhHHHHHHHHHHHHHHHhhHHHHHHHHHhccc-cccCcHHHHHHHHHHHHHhhccchHHHHHcCHHHHHHHHHHHhcc
Confidence 5899999999999999999999999998877653 344567778888999999999999999999999999999999754
No 30
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.55 E-value=9e-16 Score=154.52 Aligned_cols=78 Identities=24% Similarity=0.607 Sum_probs=66.1
Q ss_pred HhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCC-CCCchhHHHHHHHHHHHhhhHHHHHHHhccHHHHHHHHHhc
Q psy16676 109 KREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDA-CDCPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKNTL 186 (461)
Q Consensus 109 ~~~~k~~~~~~~i~~~F~icw~P~~i~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ns~~NP~iY~~~~~~fr~~~~~~~ 186 (461)
++++|++||+++|+++|++||+||+++.++..+.... .......+.++.+|+++||++||+||++++++||+++++++
T Consensus 376 ~~~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~lc 454 (464)
T 4dkl_A 376 RNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFC 454 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCccccchhHHHHHHHHHHhhhchhHHHHHHhhHHHHHHHHHHh
Confidence 5678999999999999999999999999988775422 22234556677889999999999999999999999999973
No 31
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.55 E-value=1.4e-14 Score=145.53 Aligned_cols=83 Identities=20% Similarity=0.331 Sum_probs=69.4
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHhhhHHHHHHHhccHHHHHHHHHh
Q psy16676 106 IKMKREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKNT 185 (461)
Q Consensus 106 ~~~~~~~k~~~~~~~i~~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NP~iY~~~~~~fr~~~~~~ 185 (461)
...++++|++|++++++++|++||+|+.++.++..+... .........+..+++++|+++||+||++++++||++++++
T Consensus 251 ~~~~~~~k~~~~l~~iv~~F~i~~~P~~i~~~~~~~~~~-~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~ 329 (448)
T 2z73_A 251 AGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPL-EWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQT 329 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCG-GGCCHHHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCc-ccCChHHHHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHH
Confidence 344568899999999999999999999999888776432 2233556677788999999999999999999999999999
Q ss_pred cccc
Q psy16676 186 LQCA 189 (461)
Q Consensus 186 ~~~~ 189 (461)
+++.
T Consensus 330 ~~~~ 333 (448)
T 2z73_A 330 FPWV 333 (448)
T ss_dssp CGGG
T ss_pred HHHH
Confidence 9754
No 32
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.55 E-value=1.2e-14 Score=148.77 Aligned_cols=81 Identities=47% Similarity=0.787 Sum_probs=67.1
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHhhhHHHHHHHhccHHHHHHHHHhc
Q psy16676 107 KMKREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKNTL 186 (461)
Q Consensus 107 ~~~~~~k~~~~~~~i~~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NP~iY~~~~~~fr~~~~~~~ 186 (461)
..++++|+++++++++++|++||+|+.++.++..+.. .......+.++.+++++||++||+||+ ++++||+++++++
T Consensus 413 ~~~~~~r~~~~l~~iv~~F~lcwlP~~i~~~~~~~~~--~~~~~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l 489 (514)
T 3sn6_R 413 FCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQD--NLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELL 489 (514)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--cccchHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHh
Confidence 3457789999999999999999999999988877643 334456777888999999999999999 8999999999998
Q ss_pred cccc
Q psy16676 187 QCAF 190 (461)
Q Consensus 187 ~~~~ 190 (461)
+|+.
T Consensus 490 ~~~~ 493 (514)
T 3sn6_R 490 CLRR 493 (514)
T ss_dssp C---
T ss_pred CcCc
Confidence 7543
No 33
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.53 E-value=1.6e-14 Score=140.77 Aligned_cols=83 Identities=25% Similarity=0.662 Sum_probs=69.0
Q ss_pred HHhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCC--CCchhHHHHHHHHHHHhhhHHHHHHHhccHHHHHHHHHh
Q psy16676 108 MKREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDAC--DCPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKNT 185 (461)
Q Consensus 108 ~~~~~k~~~~~~~i~~~F~icw~P~~i~~~~~~~~~~~~--~~~~~~~~~~~~l~~~ns~~NP~iY~~~~~~fr~~~~~~ 185 (461)
.++++|+++++++++++|++||+|++++.++..+..... ......+.+..+++++|+++||+||++++++||++++++
T Consensus 240 ~~~~~k~~~~~~~v~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~ 319 (364)
T 2ks9_A 240 VSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHA 319 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 456789999999999999999999999988877654321 223445667788999999999999999999999999999
Q ss_pred ccccc
Q psy16676 186 LQCAF 190 (461)
Q Consensus 186 ~~~~~ 190 (461)
++|+.
T Consensus 320 ~~~~~ 324 (364)
T 2ks9_A 320 FRCCP 324 (364)
T ss_dssp HSSSC
T ss_pred HhhcC
Confidence 98643
No 34
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.51 E-value=9.3e-15 Score=141.33 Aligned_cols=82 Identities=26% Similarity=0.460 Sum_probs=68.6
Q ss_pred HHhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHhhhHHHHHHHhccHHHHHHHHHhcc
Q psy16676 108 MKREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKNTLQ 187 (461)
Q Consensus 108 ~~~~~k~~~~~~~i~~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NP~iY~~~~~~fr~~~~~~~~ 187 (461)
.++++|+++++++++++|++||+|+.++.++..+.. ..........+..+++++|+++||+||++++++||++++++++
T Consensus 245 ~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~-~~~~~~~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~~ 323 (349)
T 1u19_A 245 QKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQ-GSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLC 323 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TSCCCHHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhheecC-CcccchHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHhc
Confidence 356778999999999999999999999888766643 2334456667788899999999999999999999999999987
Q ss_pred ccc
Q psy16676 188 CAF 190 (461)
Q Consensus 188 ~~~ 190 (461)
|..
T Consensus 324 c~~ 326 (349)
T 1u19_A 324 CGK 326 (349)
T ss_dssp SSC
T ss_pred ccC
Confidence 543
No 35
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.46 E-value=6.9e-14 Score=132.27 Aligned_cols=81 Identities=28% Similarity=0.570 Sum_probs=67.6
Q ss_pred HhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCc--------hhHHHHHHHHHHHhhhHHHHHHHhccHHHHH
Q psy16676 109 KREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACDCP--------DYVVAIFFWIGYFNSTLNPLIYAYFNRDFRE 180 (461)
Q Consensus 109 ~~~~k~~~~~~~i~~~F~icw~P~~i~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~ns~~NP~iY~~~~~~fr~ 180 (461)
++++|++|++++++++|++||+|++++.++..+........ ...+.++.+++++||++||+||++++++||+
T Consensus 207 ~~~~k~~~~~~~v~~~f~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~ 286 (296)
T 2lnl_A 207 GQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRH 286 (296)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCSCHHHHHHHTTHHHHHHHHHGGGGGTHHHHHHHHHCSHHHH
T ss_pred hhhhhHHHHHHHhhhheeeeehHHHHHHHHHHHhccccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 45678999999999999999999999999887754322211 2345677889999999999999999999999
Q ss_pred HHHHhcccc
Q psy16676 181 AFKNTLQCA 189 (461)
Q Consensus 181 ~~~~~~~~~ 189 (461)
+++++++|.
T Consensus 287 ~~~~ll~cr 295 (296)
T 2lnl_A 287 GFLKILAMH 295 (296)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHhcCC
Confidence 999999864
No 36
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.41 E-value=1.4e-13 Score=137.73 Aligned_cols=81 Identities=21% Similarity=0.516 Sum_probs=61.8
Q ss_pred HHhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCCC-CchhHHHHHHHHHHHhhhHHHHHHHhccHHHHHHHHHhc
Q psy16676 108 MKREHKAARTLGIIMGTFILCWLPFFLWYVITSLCGDACD-CPDYVVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKNTL 186 (461)
Q Consensus 108 ~~~~~k~~~~~~~i~~~F~icw~P~~i~~~~~~~~~~~~~-~~~~~~~~~~~l~~~ns~~NP~iY~~~~~~fr~~~~~~~ 186 (461)
.++++|+++++++++++|++||+|+.++.++..+...... .......++.+++++|+++||+||++++++||+++++++
T Consensus 329 ~~~~~~~~~~~~~vv~~F~i~w~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~~~~~fR~~~~~~~ 408 (434)
T 4ea3_A 329 DRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFRKFC 408 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC---
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567899999999999999999999999888766432111 122345566678999999999999999999999999977
Q ss_pred cc
Q psy16676 187 QC 188 (461)
Q Consensus 187 ~~ 188 (461)
+|
T Consensus 409 ~~ 410 (434)
T 4ea3_A 409 CA 410 (434)
T ss_dssp --
T ss_pred Cc
Confidence 54
No 37
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=98.91 E-value=3.1e-10 Score=72.16 Aligned_cols=37 Identities=38% Similarity=0.620 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhhhhhHHHhhhcChHHHHHHHHhhhc
Q psy16676 371 VVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKNTLQC 407 (461)
Q Consensus 371 ~~~~~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~ 407 (461)
++.++.+++++||++||+||++++++||++++++++|
T Consensus 2 ~~~~~~~l~~~ns~lNPiIY~~~~~~fr~~~~~~~~~ 38 (40)
T 2koe_A 2 VFAFASMLCLLNSTVNPIIYALRSKDLRHAFRSMFPS 38 (40)
T ss_dssp HHHHHHHHHHHHHHSSTTTTBTTBHHHHHHHTTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHhhh
Confidence 4567889999999999999999999999999998864
No 38
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=98.74 E-value=2.2e-09 Score=68.14 Aligned_cols=37 Identities=38% Similarity=0.620 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhhhHHHHHHHhccHHHHHHHHHhccc
Q psy16676 152 VVAIFFWIGYFNSTLNPLIYAYFNRDFREAFKNTLQC 188 (461)
Q Consensus 152 ~~~~~~~l~~~ns~~NP~iY~~~~~~fr~~~~~~~~~ 188 (461)
.+.++.+++++||++||+||++++++||++++++++|
T Consensus 2 ~~~~~~~l~~~ns~lNPiIY~~~~~~fr~~~~~~~~~ 38 (40)
T 2koe_A 2 VFAFASMLCLLNSTVNPIIYALRSKDLRHAFRSMFPS 38 (40)
T ss_dssp HHHHHHHHHHHHHHSSTTTTBTTBHHHHHHHTTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHhhh
Confidence 3567788999999999999999999999999998864
No 39
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=98.46 E-value=1.2e-08 Score=61.41 Aligned_cols=29 Identities=24% Similarity=0.826 Sum_probs=25.6
Q ss_pred hhhHHHHHHHHHHHHHHhchhHHHHHHHH
Q psy16676 330 EHKAARTLGIIMGTFILCWLPFFLWYVIT 358 (461)
Q Consensus 330 ~~k~~r~l~~vv~~F~icw~P~~v~~l~~ 358 (461)
++|++||+++++++|++||+||++..++.
T Consensus 1 e~k~~k~l~~vv~~F~icW~P~~i~~~~~ 29 (33)
T 2ki9_A 1 DVRLAKTLGLVLAVLLICWFPVLALMAHS 29 (33)
T ss_dssp CCSSSSHHHHHHHHHTTTSSHHHHHHTTT
T ss_pred CchhhhhHHHHHHHHHHHHhHHHHHHHHH
Confidence 35889999999999999999999987664
No 40
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=98.24 E-value=3.7e-08 Score=59.25 Aligned_cols=29 Identities=24% Similarity=0.826 Sum_probs=25.1
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q psy16676 111 EHKAARTLGIIMGTFILCWLPFFLWYVIT 139 (461)
Q Consensus 111 ~~k~~~~~~~i~~~F~icw~P~~i~~~~~ 139 (461)
|+|++|++++++++|++||+||++..++.
T Consensus 1 e~k~~k~l~~vv~~F~icW~P~~i~~~~~ 29 (33)
T 2ki9_A 1 DVRLAKTLGLVLAVLLICWFPVLALMAHS 29 (33)
T ss_dssp CCSSSSHHHHHHHHHTTTSSHHHHHHTTT
T ss_pred CchhhhhHHHHHHHHHHHHhHHHHHHHHH
Confidence 45788999999999999999999977653
No 41
>2jx4_A Vasopressin V2 receptor; protein, G-protein coupled receptor, glycoprotein, lipoprotein, membrane, palmitate, phosphorylation, receptor transducer; HET: DGN NLE CCS; NMR {Synthetic}
Probab=64.74 E-value=6.1 Score=25.56 Aligned_cols=14 Identities=21% Similarity=0.275 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHH
Q psy16676 260 YLAIFKEANRQEKQ 273 (461)
Q Consensus 260 Y~~I~~~lr~~~~~ 273 (461)
|.+|++.+|++.+.
T Consensus 2 y~~I~~~Iw~~~~~ 15 (52)
T 2jx4_A 2 QVLIFREIHASLVP 15 (52)
T ss_dssp CHHHHHHHHHHHTH
T ss_pred eEEEEeHHHhhCCc
Confidence 78889999988653
No 42
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=62.19 E-value=9.8 Score=22.59 Aligned_cols=27 Identities=11% Similarity=0.347 Sum_probs=17.4
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHhhh
Q psy16676 250 WIPCTIM-VFTYLAIFKEANRQEKQLHS 276 (461)
Q Consensus 250 ~iP~iii-~~~Y~~I~~~lr~~~~~~~~ 276 (461)
++|++++ ++.|..+++-=+++.++...
T Consensus 6 ~l~~v~~~~ifYFl~iRPQ~Kr~K~~~~ 33 (37)
T 2rdd_B 6 ILMLVVFGLIFYFMILRPQQKRTKEHKK 33 (37)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 4454444 67788888777776665543
No 43
>2ket_A Cathelicidin-6; antimicrobial peptide, antibiotic, antimicrobial, fungicide, pyrrolidone carboxylic acid, secreted; NMR {Bos taurus}
Probab=42.95 E-value=14 Score=19.17 Aligned_cols=12 Identities=33% Similarity=0.780 Sum_probs=10.0
Q ss_pred hHHHHHHHHhhh
Q psy16676 395 RDFREAFKNTLQ 406 (461)
Q Consensus 395 ~~fR~~~~~~~~ 406 (461)
+.||+.|+++|.
T Consensus 4 krfrkkfkklfk 15 (27)
T 2ket_A 4 KRFRKKFKKLFK 15 (27)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 578999998886
No 44
>1jb0_I Photosystem 1 reaction centre subunit VIII; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: f.23.17.1 PDB: 3pcq_I*
Probab=41.61 E-value=53 Score=19.53 Aligned_cols=26 Identities=23% Similarity=0.401 Sum_probs=20.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16676 238 FGNAIVSSSISFWIPCTIMVFTYLAI 263 (461)
Q Consensus 238 ~~y~i~~~~~~f~iP~iii~~~Y~~I 263 (461)
..=.++.=+.+.++|.+.|...+..|
T Consensus 9 ~LPsI~VPlVglvfPai~Mallf~yI 34 (38)
T 1jb0_I 9 FLPWIFIPVVCWLMPTVVMGLLFLYI 34 (38)
T ss_dssp THHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred hCChhhHhHHHHHHHHHHHHHHHHhh
Confidence 33457777888999999998887766
No 45
>3arc_M Photosystem II reaction center protein M; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_M* 2axt_M* 3bz1_M* 3bz2_M* 3kzi_M* 3prq_M* 3prr_M* 3a0b_M* 3a0h_M*
Probab=38.69 E-value=51 Score=19.31 Aligned_cols=23 Identities=9% Similarity=0.518 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy16676 241 AIVSSSISFWIPCTIMVFTYLAI 263 (461)
Q Consensus 241 ~i~~~~~~f~iP~iii~~~Y~~I 263 (461)
......+..++|.+..++.|+.-
T Consensus 7 ~fiAt~Lfi~iPt~FLlilYvqT 29 (36)
T 3arc_M 7 GLIATALFVLVPSVFLIILYVQT 29 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhee
Confidence 34556778889999999999763
Done!