Query psy16677
Match_columns 227
No_of_seqs 147 out of 2023
Neff 9.7
Searched_HMMs 29240
Date Fri Aug 16 19:10:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16677.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16677hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 2.9E-28 9.8E-33 211.8 14.7 147 28-175 27-178 (510)
2 2rh1_A Beta-2-adrenergic recep 99.9 3.3E-27 1.1E-31 204.5 14.8 147 29-175 36-182 (500)
3 3uon_A Human M2 muscarinic ace 99.9 1.8E-26 6.1E-31 197.3 17.2 138 33-170 23-160 (467)
4 1u19_A Rhodopsin; G protein-co 99.9 3.6E-26 1.2E-30 188.3 17.1 145 28-174 33-177 (349)
5 2ks9_A Substance-P receptor; w 99.9 1.1E-25 3.7E-30 186.9 18.4 140 29-170 28-167 (364)
6 3pbl_A D(3) dopamine receptor, 99.9 6.6E-26 2.3E-30 194.6 12.1 145 30-175 35-183 (481)
7 3odu_A C-X-C chemokine recepto 99.9 9.8E-26 3.4E-30 194.5 13.2 142 28-171 43-184 (502)
8 2lnl_A C-X-C chemokine recepto 99.9 4.2E-25 1.4E-29 178.6 15.9 137 32-171 10-146 (296)
9 3v2y_A Sphingosine 1-phosphate 99.9 3.1E-25 1.1E-29 193.1 15.6 142 32-176 62-203 (520)
10 2z73_A Rhodopsin; visual pigme 99.9 6.7E-25 2.3E-29 187.2 17.4 145 29-174 30-175 (448)
11 4amj_A Beta-1 adrenergic recep 99.9 3.2E-26 1.1E-30 185.8 7.8 145 29-173 7-151 (315)
12 4dkl_A MU-type opioid receptor 99.9 2.6E-25 8.9E-30 189.8 13.5 141 30-171 14-154 (464)
13 3vw7_A Proteinase-activated re 99.9 5.9E-25 2E-29 188.8 14.5 144 30-174 17-160 (484)
14 4ea3_A Fusion protein of nocic 99.9 2.6E-24 9E-29 183.1 15.9 145 29-174 121-265 (434)
15 3eml_A Human adenosine A2A rec 99.9 1E-24 3.4E-29 187.3 12.2 141 33-176 21-161 (488)
16 4eiy_A Adenosine receptor A2A/ 99.9 1.2E-24 4.2E-29 184.9 12.6 147 26-175 24-170 (447)
17 3rze_A Histamine H1 receptor, 99.9 2E-24 6.7E-29 183.9 11.3 136 33-168 8-143 (452)
18 3sn6_R Lysozyme, beta-2 adrene 99.9 2E-24 7E-29 187.5 10.7 146 31-176 180-325 (514)
19 1hll_A Alpha-2A adrenergic rec 98.5 1.4E-08 4.7E-13 53.5 -0.5 30 119-148 2-31 (32)
20 2lot_A Apelin receptor; membra 96.9 9.7E-05 3.3E-09 44.7 -1.0 30 35-64 30-59 (64)
21 3arc_I Photosystem II reaction 33.2 54 0.0018 17.0 2.9 18 34-51 9-26 (38)
22 4grv_A Neurotensin receptor ty 30.5 66 0.0023 27.0 5.0 24 24-47 26-49 (510)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.95 E-value=2.9e-28 Score=211.77 Aligned_cols=147 Identities=22% Similarity=0.363 Sum_probs=129.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcc---cchhhHHHHHHHHHHHHHHHhHhhHHHHHHhc--Cccccc
Q psy16677 28 SSIIWMTLRASIMIFIIVASIGGNLLVIVSVMRHRKL---RIITNYFVVSLAFADMLVAMVAMTFNASVQVT--GKWNFS 102 (227)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~g~~gN~~~i~~~~~~~~l---~~~~~~~l~~La~~d~l~~l~~~~~~~~~~~~--~~~~~~ 102 (227)
.......++.+++.+++++|++||+++++++.+++++ +++.++|++|||++|++++++.+|+.+..... +.|.+|
T Consensus 27 ~~~~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g 106 (510)
T 4grv_A 27 TDIYSKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFG 106 (510)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhh
Confidence 3445677888899999999999999999999887654 47889999999999999999999988876654 469999
Q ss_pred ccchhhcchhhHHHHHHHHHHHHHHHHhhheeeecCCccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhccc
Q psy16677 103 FFMCDVWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPINMTKRVVAFMLLNVWVSPAVISFVPIMCGWYT 175 (227)
Q Consensus 103 ~~~C~~~~~~~~~~~~~s~~~~~~isi~R~~ai~~p~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 175 (227)
..+|++..++..++..+|++++++||+|||+||++|++|+...+++++..+++++|++++++++|+ ++++..
T Consensus 107 ~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~-~~~~~~ 178 (510)
T 4grv_A 107 DAGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPM-LFTMGL 178 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTH-HHHEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHH-HHhhcc
Confidence 999999999999999999999999999999999999999999999999999999999999999888 555443
No 2
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.95 E-value=3.3e-27 Score=204.52 Aligned_cols=147 Identities=38% Similarity=0.770 Sum_probs=135.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcccchhhHHHHHHHHHHHHHHHhHhhHHHHHHhcCcccccccchhh
Q psy16677 29 SIIWMTLRASIMIFIIVASIGGNLLVIVSVMRHRKLRIITNYFVVSLAFADMLVAMVAMTFNASVQVTGKWNFSFFMCDV 108 (227)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~g~~gN~~~i~~~~~~~~l~~~~~~~l~~La~~d~l~~l~~~~~~~~~~~~~~~~~~~~~C~~ 108 (227)
......+..+++.+++++|++||+++++++.++++++++.+++++|||++|++.+++.+|..+.....+.|.++...|++
T Consensus 36 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~ 115 (500)
T 2rh1_A 36 DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEF 115 (500)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhH
Confidence 34456677889999999999999999999999999999999999999999999999999998888888899999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhheeeecCCccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhccc
Q psy16677 109 WNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPINMTKRVVAFMLLNVWVSPAVISFVPIMCGWYT 175 (227)
Q Consensus 109 ~~~~~~~~~~~s~~~~~~isi~R~~ai~~p~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 175 (227)
..++..++..+|++++++||+|||+||++|++|++..+++++..+++++|+++++++++|++.+|..
T Consensus 116 ~~~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~ 182 (500)
T 2rh1_A 116 WTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYR 182 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcchheeeec
Confidence 9999999999999999999999999999999999999999999999999999999997776666544
No 3
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.94 E-value=1.8e-26 Score=197.29 Aligned_cols=138 Identities=33% Similarity=0.638 Sum_probs=131.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhccCcccchhhHHHHHHHHHHHHHHHhHhhHHHHHHhcCcccccccchhhcchh
Q psy16677 33 MTLRASIMIFIIVASIGGNLLVIVSVMRHRKLRIITNYFVVSLAFADMLVAMVAMTFNASVQVTGKWNFSFFMCDVWNSL 112 (227)
Q Consensus 33 ~~~~~~~~~~~~~~g~~gN~~~i~~~~~~~~l~~~~~~~l~~La~~d~l~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~ 112 (227)
..+..+++.+++++|++||+++++++.++++++++.+++++|||++|++.+++.+|..+.....+.|.++...|++..++
T Consensus 23 ~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~ 102 (467)
T 3uon_A 23 VVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLAL 102 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHHHHH
Confidence 56678889999999999999999999999999999999999999999999999999999888888999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhheeeecCCccCcccchhHHHHHHHHHHHHHHHHHHhhhh
Q psy16677 113 DVYFSTASILHLCCISVDRYYAIVKPLKYPINMTKRVVAFMLLNVWVSPAVISFVPIM 170 (227)
Q Consensus 113 ~~~~~~~s~~~~~~isi~R~~ai~~p~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 170 (227)
..++..+|++++++||+|||++|++|++|+...+.+++..+++++|++++++++|+++
T Consensus 103 ~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~ 160 (467)
T 3uon_A 103 DYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAIL 160 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999988844
No 4
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.94 E-value=3.6e-26 Score=188.28 Aligned_cols=145 Identities=20% Similarity=0.366 Sum_probs=132.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcccchhhHHHHHHHHHHHHHHHhHhhHHHHHHhcCcccccccchh
Q psy16677 28 SSIIWMTLRASIMIFIIVASIGGNLLVIVSVMRHRKLRIITNYFVVSLAFADMLVAMVAMTFNASVQVTGKWNFSFFMCD 107 (227)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~g~~gN~~~i~~~~~~~~l~~~~~~~l~~La~~d~l~~l~~~~~~~~~~~~~~~~~~~~~C~ 107 (227)
.+.....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++...|..+.....+.|.++...|+
T Consensus 33 ~~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~ 112 (349)
T 1u19_A 33 AEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCN 112 (349)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHH
Confidence 34556778888999999999999999999999999999999999999999999999888898888777788999999999
Q ss_pred hcchhhHHHHHHHHHHHHHHHHhhheeeecCCccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhcc
Q psy16677 108 VWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPINMTKRVVAFMLLNVWVSPAVISFVPIMCGWY 174 (227)
Q Consensus 108 ~~~~~~~~~~~~s~~~~~~isi~R~~ai~~p~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~ 174 (227)
+..++..++..+|++++++|++|||++|++|++|++ .+.++....++++|+++++.++|+ ++++.
T Consensus 113 ~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~-~~~~~~~~~i~~~W~~~~~~~~~~-~~~~~ 177 (349)
T 1u19_A 113 LEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPP-LVGWS 177 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCC-CCHHHHHHHHHHHHHHHHHHHSGG-GTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHheeeCCcccee-eccchhHHHHHHHHHHHHHHHHHH-HHhee
Confidence 999999999999999999999999999999999877 688999999999999999999888 55554
No 5
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.94 E-value=1.1e-25 Score=186.85 Aligned_cols=140 Identities=28% Similarity=0.536 Sum_probs=126.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcccchhhHHHHHHHHHHHHHHHhHhhHHHHHHhcCcccccccchhh
Q psy16677 29 SIIWMTLRASIMIFIIVASIGGNLLVIVSVMRHRKLRIITNYFVVSLAFADMLVAMVAMTFNASVQVTGKWNFSFFMCDV 108 (227)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~g~~gN~~~i~~~~~~~~l~~~~~~~l~~La~~d~l~~l~~~~~~~~~~~~~~~~~~~~~C~~ 108 (227)
+.....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.+++..|..+.....+.|.++...|++
T Consensus 28 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~ 107 (364)
T 2ks9_A 28 PAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKF 107 (364)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHh
Confidence 33445566888999999999999999999999999999999999999999999998888988877777889999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhheeeecCCccCcccchhHHHHHHHHHHHHHHHHHHhhhh
Q psy16677 109 WNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPINMTKRVVAFMLLNVWVSPAVISFVPIM 170 (227)
Q Consensus 109 ~~~~~~~~~~~s~~~~~~isi~R~~ai~~p~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 170 (227)
..++..++..+|++++++||+|||++|++|++|+ .+.++....++++|+++++.++|+..
T Consensus 108 ~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~--~~~~~~~~~i~~~W~~s~~~~~p~~~ 167 (364)
T 2ks9_A 108 HNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPR--LSATATKVVICVIWVLALLLAFPQGY 167 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTS--CCHHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--cccchHHHHHHHHHHHHHHHHhHHHH
Confidence 9999999999999999999999999999999876 58888889999999999999887643
No 6
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.93 E-value=6.6e-26 Score=194.57 Aligned_cols=145 Identities=43% Similarity=0.628 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcccchhhHHHHHHHHHHHHHHHhHhhHHHHHHhc-Ccccccccchhh
Q psy16677 30 IIWMTLRASIMIFIIVASIGGNLLVIVSVMRHRKLRIITNYFVVSLAFADMLVAMVAMTFNASVQVT-GKWNFSFFMCDV 108 (227)
Q Consensus 30 ~~~~~~~~~~~~~~~~~g~~gN~~~i~~~~~~~~l~~~~~~~l~~La~~d~l~~l~~~~~~~~~~~~-~~~~~~~~~C~~ 108 (227)
.....+..+++.+++++|++||+++++++.++++++++.+++++|||++|++.+++.+|..+..... +.|.++...|++
T Consensus 35 ~~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~ 114 (481)
T 3pbl_A 35 ARPHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDV 114 (481)
T ss_dssp ------CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhh
Confidence 3455667788999999999999999999999999999999999999999999998999988876665 579999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhheeeecCCcc---CcccchhHHHHHHHHHHHHHHHHHHhhhhhhccc
Q psy16677 109 WNSLDVYFSTASILHLCCISVDRYYAIVKPLKY---PINMTKRVVAFMLLNVWVSPAVISFVPIMCGWYT 175 (227)
Q Consensus 109 ~~~~~~~~~~~s~~~~~~isi~R~~ai~~p~~~---~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 175 (227)
..++..++..+|++++++||+|||++|++|++| ....+.+++..+++++|++++++++|+ ++++..
T Consensus 115 ~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~-~~~~~~ 183 (481)
T 3pbl_A 115 FVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPL-LFGFNT 183 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHH-HTTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHH-Hheecc
Confidence 999999999999999999999999999999998 567789999999999999999999888 555543
No 7
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.93 E-value=9.8e-26 Score=194.47 Aligned_cols=142 Identities=25% Similarity=0.394 Sum_probs=129.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcccchhhHHHHHHHHHHHHHHHhHhhHHHHHHhcCcccccccchh
Q psy16677 28 SSIIWMTLRASIMIFIIVASIGGNLLVIVSVMRHRKLRIITNYFVVSLAFADMLVAMVAMTFNASVQVTGKWNFSFFMCD 107 (227)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~g~~gN~~~i~~~~~~~~l~~~~~~~l~~La~~d~l~~l~~~~~~~~~~~~~~~~~~~~~C~ 107 (227)
.......+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.+ +.+|..+..... .|.++...|+
T Consensus 43 ~~~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~~-~~~~~~~~C~ 120 (502)
T 3odu_A 43 NANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAVA-NWYFGNFLCK 120 (502)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHHT-CCCSHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHhc-CCcCCchhhh
Confidence 33456778889999999999999999999999999999999999999999999995 677887766654 6999999999
Q ss_pred hcchhhHHHHHHHHHHHHHHHHhhheeeecCCccCcccchhHHHHHHHHHHHHHHHHHHhhhhh
Q psy16677 108 VWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPINMTKRVVAFMLLNVWVSPAVISFVPIMC 171 (227)
Q Consensus 108 ~~~~~~~~~~~~s~~~~~~isi~R~~ai~~p~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~ 171 (227)
+..++..++..+|++++++||+|||++|++|++|++..+.+++..+++++|++++++++|+++.
T Consensus 121 ~~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~ 184 (502)
T 3odu_A 121 AVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIF 184 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999888554
No 8
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.93 E-value=4.2e-25 Score=178.64 Aligned_cols=137 Identities=29% Similarity=0.465 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcccchhhHHHHHHHHHHHHHHHhHhhHHHHHHhcCcccccccchhhcch
Q psy16677 32 WMTLRASIMIFIIVASIGGNLLVIVSVMRHRKLRIITNYFVVSLAFADMLVAMVAMTFNASVQVTGKWNFSFFMCDVWNS 111 (227)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~gN~~~i~~~~~~~~l~~~~~~~l~~La~~d~l~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~ 111 (227)
...+..+++.+++++|++||+++++++.++|++|++.|+++.|||++|++.++ ..|....... .+|..|+..|+...+
T Consensus 10 ~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l-~~p~~~~~~~-~~~~~~~~~c~~~~~ 87 (296)
T 2lnl_A 10 NKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASKV-NGWIFGTFLCKVVSL 87 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHH-HHHHHHHHHH-SSSCCSSHHHHHHHH
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHH-hhhHHHhhcc-CCCccchhHHHHHhh
Confidence 45677888999999999999999999999999999999999999999999975 4566555444 569999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhheeeecCCccCcccchhHHHHHHHHHHHHHHHHHHhhhhh
Q psy16677 112 LDVYFSTASILHLCCISVDRYYAIVKPLKYPINMTKRVVAFMLLNVWVSPAVISFVPIMC 171 (227)
Q Consensus 112 ~~~~~~~~s~~~~~~isi~R~~ai~~p~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~ 171 (227)
+..++..+|++++++||+|||.+|++|++|+... +++...+++++|+.+++.++|+...
T Consensus 88 ~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~-~~~~~~~~~~~W~~s~~~~~p~~~~ 146 (296)
T 2lnl_A 88 LKEVNFYSGILLLACISVDRYLAIVHATRTLTQK-RHLVKFVCLGCWGLSMNLSLPFFLF 146 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCH-HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhhhHHHHHHHHHHHHhhhhhhhhhccccchhh-hhhhHheehHHHHHHHHHhcchhhc
Confidence 9999999999999999999999999999988754 4566778889999999999888443
No 9
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.93 E-value=3.1e-25 Score=193.08 Aligned_cols=142 Identities=18% Similarity=0.314 Sum_probs=123.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcccchhhHHHHHHHHHHHHHHHhHhhHHHHHHhcCcccccccchhhcch
Q psy16677 32 WMTLRASIMIFIIVASIGGNLLVIVSVMRHRKLRIITNYFVVSLAFADMLVAMVAMTFNASVQVTGKWNFSFFMCDVWNS 111 (227)
Q Consensus 32 ~~~~~~~~~~~~~~~g~~gN~~~i~~~~~~~~l~~~~~~~l~~La~~d~l~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~ 111 (227)
...+..+++.+++++|++||+++++++.+++++|++.++|++|||++|++++++..|..+.. ....|..+...|++..+
T Consensus 62 ~~~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c~~~~~ 140 (520)
T 3v2y_A 62 SIKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQWFLREG 140 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCccccchHHH
Confidence 34778889999999999999999999999999999999999999999999998888877765 45678889999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhheeeecCCccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhcccc
Q psy16677 112 LDVYFSTASILHLCCISVDRYYAIVKPLKYPINMTKRVVAFMLLNVWVSPAVISFVPIMCGWYTT 176 (227)
Q Consensus 112 ~~~~~~~~s~~~~~~isi~R~~ai~~p~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 176 (227)
+..++.++|++++++||+|||+||+ |++|+...+.+++..+++++|++++++++|| +++|...
T Consensus 141 ~~~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~-~~~~~~~ 203 (520)
T 3v2y_A 141 SMFVALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLP-IMGWNCI 203 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTT-TTTCBCT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHH-HHeeccc
Confidence 9999999999999999999999999 9999999999999999999999999999998 6666544
No 10
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.93 E-value=6.7e-25 Score=187.24 Aligned_cols=145 Identities=26% Similarity=0.454 Sum_probs=132.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcccchhhHHHHHHHHHHHHHHHhH-hhHHHHHHhcCcccccccchh
Q psy16677 29 SIIWMTLRASIMIFIIVASIGGNLLVIVSVMRHRKLRIITNYFVVSLAFADMLVAMVA-MTFNASVQVTGKWNFSFFMCD 107 (227)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~g~~gN~~~i~~~~~~~~l~~~~~~~l~~La~~d~l~~l~~-~~~~~~~~~~~~~~~~~~~C~ 107 (227)
......++.+++.+++++|++||+++++++.+++++|++.+++++|||++|++.+++. +|..+.....+.|.++...|+
T Consensus 30 ~~~~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C~ 109 (448)
T 2z73_A 30 PDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACK 109 (448)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHHH
Confidence 3445677888999999999999999999999999999999999999999999998764 788777777788999999999
Q ss_pred hcchhhHHHHHHHHHHHHHHHHhhheeeecCCccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhcc
Q psy16677 108 VWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPINMTKRVVAFMLLNVWVSPAVISFVPIMCGWY 174 (227)
Q Consensus 108 ~~~~~~~~~~~~s~~~~~~isi~R~~ai~~p~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~ 174 (227)
+..++..++..+|++++++||+|||++|++|++|++..+.+++..+++++|++++++++++ +++|.
T Consensus 110 ~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~-~~~~~ 175 (448)
T 2z73_A 110 VYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGP-IFGWG 175 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGG-GGTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHH-Hhcee
Confidence 9999999999999999999999999999999999999999999999999999999999888 55553
No 11
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.93 E-value=3.2e-26 Score=185.79 Aligned_cols=145 Identities=38% Similarity=0.767 Sum_probs=134.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcccchhhHHHHHHHHHHHHHHHhHhhHHHHHHhcCcccccccchhh
Q psy16677 29 SIIWMTLRASIMIFIIVASIGGNLLVIVSVMRHRKLRIITNYFVVSLAFADMLVAMVAMTFNASVQVTGKWNFSFFMCDV 108 (227)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~g~~gN~~~i~~~~~~~~l~~~~~~~l~~La~~d~l~~l~~~~~~~~~~~~~~~~~~~~~C~~ 108 (227)
+........+++.+++++|++||+++++++.+++++|++.++++.|||++|++.+++..|..+.....+.|.++...|++
T Consensus 7 ~~~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~ 86 (315)
T 4amj_A 7 SQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCEL 86 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHH
Confidence 34566778889999999999999999999999999999999999999999999988889988888888899999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhheeeecCCccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhc
Q psy16677 109 WNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPINMTKRVVAFMLLNVWVSPAVISFVPIMCGW 173 (227)
Q Consensus 109 ~~~~~~~~~~~s~~~~~~isi~R~~ai~~p~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~ 173 (227)
..++..++..+|++++++||+|||++|++|++|++..++++....++++|+++++.+.||.+..+
T Consensus 87 ~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~ 151 (315)
T 4amj_A 87 WTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHW 151 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999998899999999999999999999988866544
No 12
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.93 E-value=2.6e-25 Score=189.78 Aligned_cols=141 Identities=27% Similarity=0.482 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcccchhhHHHHHHHHHHHHHHHhHhhHHHHHHhcCcccccccchhhc
Q psy16677 30 IIWMTLRASIMIFIIVASIGGNLLVIVSVMRHRKLRIITNYFVVSLAFADMLVAMVAMTFNASVQVTGKWNFSFFMCDVW 109 (227)
Q Consensus 30 ~~~~~~~~~~~~~~~~~g~~gN~~~i~~~~~~~~l~~~~~~~l~~La~~d~l~~l~~~~~~~~~~~~~~~~~~~~~C~~~ 109 (227)
.....++.+++.+++++|++||+++++++.++++++++.+++++|||++|++.++. +|..+.....+.|.++...|++.
T Consensus 14 ~~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~~~~C~~~ 92 (464)
T 4dkl_A 14 MVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCKIV 92 (464)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccccchhhhH
Confidence 34577888899999999999999999999999999999999999999999999866 88888888888999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHhhheeeecCCccCcccchhHHHHHHHHHHHHHHHHHHhhhhh
Q psy16677 110 NSLDVYFSTASILHLCCISVDRYYAIVKPLKYPINMTKRVVAFMLLNVWVSPAVISFVPIMC 171 (227)
Q Consensus 110 ~~~~~~~~~~s~~~~~~isi~R~~ai~~p~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~ 171 (227)
.++..++..+|++++++||+|||++|++|++|++..+.++...+++++|++++++++|+++.
T Consensus 93 ~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~ 154 (464)
T 4dkl_A 93 ISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFM 154 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999888553
No 13
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.92 E-value=5.9e-25 Score=188.78 Aligned_cols=144 Identities=22% Similarity=0.213 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcccchhhHHHHHHHHHHHHHHHhHhhHHHHHHhcCcccccccchhhc
Q psy16677 30 IIWMTLRASIMIFIIVASIGGNLLVIVSVMRHRKLRIITNYFVVSLAFADMLVAMVAMTFNASVQVTGKWNFSFFMCDVW 109 (227)
Q Consensus 30 ~~~~~~~~~~~~~~~~~g~~gN~~~i~~~~~~~~l~~~~~~~l~~La~~d~l~~l~~~~~~~~~~~~~~~~~~~~~C~~~ 109 (227)
.....++.+++.+++++|++||+++++++.++++++++.+++++|||++|++.++...+........+.|.++...|++.
T Consensus 17 ~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 96 (484)
T 3vw7_A 17 SWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSVLPFKISYYFSGSDWQFGSELCRFV 96 (484)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTSCCCSCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhHHhHH
Confidence 45667788899999999999999999999999999999999999999999999755444444444445899999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHhhheeeecCCccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhcc
Q psy16677 110 NSLDVYFSTASILHLCCISVDRYYAIVKPLKYPINMTKRVVAFMLLNVWVSPAVISFVPIMCGWY 174 (227)
Q Consensus 110 ~~~~~~~~~~s~~~~~~isi~R~~ai~~p~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~ 174 (227)
.++..++..+|++++++||+|||+||++|++|+...+.+++..+++++|++++++++|+ ++++.
T Consensus 97 ~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~-~~~~~ 160 (484)
T 3vw7_A 97 TAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPL-LLKEQ 160 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHH-HTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHH-HHhhh
Confidence 99999999999999999999999999999999999999999999999999999999888 44443
No 14
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.92 E-value=2.6e-24 Score=183.08 Aligned_cols=145 Identities=26% Similarity=0.436 Sum_probs=126.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcccchhhHHHHHHHHHHHHHHHhHhhHHHHHHhcCcccccccchhh
Q psy16677 29 SIIWMTLRASIMIFIIVASIGGNLLVIVSVMRHRKLRIITNYFVVSLAFADMLVAMVAMTFNASVQVTGKWNFSFFMCDV 108 (227)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~g~~gN~~~i~~~~~~~~l~~~~~~~l~~La~~d~l~~l~~~~~~~~~~~~~~~~~~~~~C~~ 108 (227)
......+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++. ++..|..+.....+.|.++...|++
T Consensus 121 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~~~~C~~ 199 (434)
T 4ea3_A 121 PLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALCKT 199 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCcccHHHH
Confidence 345667778899999999999999999999999999999999999999999998 5778888888888889999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhheeeecCCccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhcc
Q psy16677 109 WNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPINMTKRVVAFMLLNVWVSPAVISFVPIMCGWY 174 (227)
Q Consensus 109 ~~~~~~~~~~~s~~~~~~isi~R~~ai~~p~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~ 174 (227)
..++..++..+|++++++||+|||++|++|++|++..+++++..+++++|++++++++|+.+.+..
T Consensus 200 ~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~ 265 (434)
T 4ea3_A 200 VIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSA 265 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHheeeee
Confidence 999999999999999999999999999999999999999999999999999999999888665443
No 15
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.92 E-value=1e-24 Score=187.29 Aligned_cols=141 Identities=31% Similarity=0.479 Sum_probs=128.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhccCcccchhhHHHHHHHHHHHHHHHhHhhHHHHHHhcCcccccccchhhcchh
Q psy16677 33 MTLRASIMIFIIVASIGGNLLVIVSVMRHRKLRIITNYFVVSLAFADMLVAMVAMTFNASVQVTGKWNFSFFMCDVWNSL 112 (227)
Q Consensus 33 ~~~~~~~~~~~~~~g~~gN~~~i~~~~~~~~l~~~~~~~l~~La~~d~l~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~ 112 (227)
..+..+++.+++++|++||+++++++.++++++++.+++++|||++|++.+++.+|..+.... .|..+...|++..++
T Consensus 21 ~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~--~~~~~~~~C~~~~~~ 98 (488)
T 3eml_A 21 SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST--GFCAACHGCLFIACF 98 (488)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHTT--CCEECHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cccccchHHHHHHHH
Confidence 456678889999999999999999999999999999999999999999999899888775443 678888999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhheeeecCCccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhcccc
Q psy16677 113 DVYFSTASILHLCCISVDRYYAIVKPLKYPINMTKRVVAFMLLNVWVSPAVISFVPIMCGWYTT 176 (227)
Q Consensus 113 ~~~~~~~s~~~~~~isi~R~~ai~~p~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 176 (227)
..++..+|++++++||+|||++|++|++|++..+++++..+++++|++++++++|| +++|...
T Consensus 99 ~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~-~~~~~~~ 161 (488)
T 3eml_A 99 VLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTP-MLGWNNC 161 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTG-GGTCCSS
T ss_pred HHHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHH-Hhccccc
Confidence 99999999999999999999999999999999999999999999999999999888 5555443
No 16
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.92 E-value=1.2e-24 Score=184.88 Aligned_cols=147 Identities=31% Similarity=0.467 Sum_probs=131.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcccchhhHHHHHHHHHHHHHHHhHhhHHHHHHhcCcccccccc
Q psy16677 26 NVSSIIWMTLRASIMIFIIVASIGGNLLVIVSVMRHRKLRIITNYFVVSLAFADMLVAMVAMTFNASVQVTGKWNFSFFM 105 (227)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~g~~gN~~~i~~~~~~~~l~~~~~~~l~~La~~d~l~~l~~~~~~~~~~~~~~~~~~~~~ 105 (227)
...+.....+..+++.+++++|++||+++++++.++++++++.+++++|||++|++.+++.+|..+... ..|..+...
T Consensus 24 ~~~~~~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~--~~~~~~~~~ 101 (447)
T 4eiy_A 24 GAPPIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHG 101 (447)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH--TTCEEEHHH
T ss_pred CCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccCccH
Confidence 334556677888899999999999999999999999999999999999999999999989988877643 357778899
Q ss_pred hhhcchhhHHHHHHHHHHHHHHHHhhheeeecCCccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhccc
Q psy16677 106 CDVWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPINMTKRVVAFMLLNVWVSPAVISFVPIMCGWYT 175 (227)
Q Consensus 106 C~~~~~~~~~~~~~s~~~~~~isi~R~~ai~~p~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 175 (227)
|++..++..++..+|++++++||+|||++|++|++|+...+.+++..+++++|++++++++|| +++|..
T Consensus 102 C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~-~~~~~~ 170 (447)
T 4eiy_A 102 CLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTP-MLGWNN 170 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGG-GGTCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhh-hheecc
Confidence 999999999999999999999999999999999999999999999999999999999999888 555544
No 17
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.91 E-value=2e-24 Score=183.88 Aligned_cols=136 Identities=30% Similarity=0.498 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhccCcccchhhHHHHHHHHHHHHHHHhHhhHHHHHHhcCcccccccchhhcchh
Q psy16677 33 MTLRASIMIFIIVASIGGNLLVIVSVMRHRKLRIITNYFVVSLAFADMLVAMVAMTFNASVQVTGKWNFSFFMCDVWNSL 112 (227)
Q Consensus 33 ~~~~~~~~~~~~~~g~~gN~~~i~~~~~~~~l~~~~~~~l~~La~~d~l~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~ 112 (227)
..++.+++.+++++|++||+++++++.++++++++.+++++|||++|++.+++.+|..+.....+.|.++...|++..++
T Consensus 8 ~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~ 87 (452)
T 3rze_A 8 LMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSM 87 (452)
T ss_dssp -CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHHHH
Confidence 44567788999999999999999999999999999999999999999999999999999888888999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhheeeecCCccCcccchhHHHHHHHHHHHHHHHHHHhh
Q psy16677 113 DVYFSTASILHLCCISVDRYYAIVKPLKYPINMTKRVVAFMLLNVWVSPAVISFVP 168 (227)
Q Consensus 113 ~~~~~~~s~~~~~~isi~R~~ai~~p~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 168 (227)
..++..+|++++++||+|||++|++|++|+...+.+++..+++++|++++++++|.
T Consensus 88 ~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~ 143 (452)
T 3rze_A 88 DYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPI 143 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999997764
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.91 E-value=2e-24 Score=187.52 Aligned_cols=146 Identities=39% Similarity=0.792 Sum_probs=134.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcccchhhHHHHHHHHHHHHHHHhHhhHHHHHHhcCcccccccchhhcc
Q psy16677 31 IWMTLRASIMIFIIVASIGGNLLVIVSVMRHRKLRIITNYFVVSLAFADMLVAMVAMTFNASVQVTGKWNFSFFMCDVWN 110 (227)
Q Consensus 31 ~~~~~~~~~~~~~~~~g~~gN~~~i~~~~~~~~l~~~~~~~l~~La~~d~l~~l~~~~~~~~~~~~~~~~~~~~~C~~~~ 110 (227)
....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.+++.+|..+.....+.|.++...|++..
T Consensus 180 ~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 259 (514)
T 3sn6_R 180 VWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWT 259 (514)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhhHH
Confidence 34566788899999999999999999999999999999999999999999999889999888888888999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhhheeeecCCccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhcccc
Q psy16677 111 SLDVYFSTASILHLCCISVDRYYAIVKPLKYPINMTKRVVAFMLLNVWVSPAVISFVPIMCGWYTT 176 (227)
Q Consensus 111 ~~~~~~~~~s~~~~~~isi~R~~ai~~p~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~ 176 (227)
++..++..+|++++++||+|||++|++|++|+...+++++..+++++|+++++++++|++++|...
T Consensus 260 ~l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~ 325 (514)
T 3sn6_R 260 SIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRA 325 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceec
Confidence 999999999999999999999999999999999899999999999999999999988877666544
No 19
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.47 E-value=1.4e-08 Score=53.48 Aligned_cols=30 Identities=47% Similarity=0.963 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhhheeeecCCccCcccchh
Q psy16677 119 ASILHLCCISVDRYYAIVKPLKYPINMTKR 148 (227)
Q Consensus 119 ~s~~~~~~isi~R~~ai~~p~~~~~~~~~~ 148 (227)
+|++++++||+|||++|++|++|....+.+
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~ 31 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPR 31 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 689999999999999999999988766543
No 20
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=96.86 E-value=9.7e-05 Score=44.69 Aligned_cols=30 Identities=27% Similarity=0.443 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhccCcc
Q psy16677 35 LRASIMIFIIVASIGGNLLVIVSVMRHRKL 64 (227)
Q Consensus 35 ~~~~~~~~~~~~g~~gN~~~i~~~~~~~~l 64 (227)
+..+++.+++++|++||+++++++.++|.-
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~ 59 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGH 59 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEeccc
Confidence 778899999999999999999998887653
No 21
>3arc_I Photosystem II reaction center protein I; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_I* 2axt_I* 3bz1_I* 3bz2_I* 3kzi_I* 3prq_I* 3prr_I* 3a0b_I* 3a0h_I*
Probab=33.22 E-value=54 Score=16.96 Aligned_cols=18 Identities=6% Similarity=0.204 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy16677 34 TLRASIMIFIIVASIGGN 51 (227)
Q Consensus 34 ~~~~~~~~~~~~~g~~gN 51 (227)
+...+++..++++|.+.|
T Consensus 9 y~vV~ffvsLFiFGfLsn 26 (38)
T 3arc_I 9 YIVVTFFVLLFVFGFLSG 26 (38)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHccccCC
Confidence 344555566666776655
No 22
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=30.52 E-value=66 Score=26.97 Aligned_cols=24 Identities=8% Similarity=0.091 Sum_probs=9.9
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHH
Q psy16677 24 DENVSSIIWMTLRASIMIFIIVAS 47 (227)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~g 47 (227)
..+.........+..+..+++++|
T Consensus 26 ~~~~~~~v~~~~~~~~i~~~g~~g 49 (510)
T 4grv_A 26 NTDIYSKVLVTAIYLALFVVGTVG 49 (510)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHH
Confidence 334444333333333444444444
Done!