BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16683
(139 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|332031559|gb|EGI71031.1| Protein embryonic gonad [Acromyrmex echinatior]
Length = 434
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 87/101 (86%), Positives = 94/101 (93%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ C+VCGEPAAGFHFGAFTCEGCKSFFGR+YNNL SISECKN C+INKKNRT+CK+
Sbjct: 54 MNQLCRVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLGSISECKNGGVCVINKKNRTACKA 113
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQ 101
CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ QQA+ +
Sbjct: 114 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQSQQAQNR 154
>gi|194749753|ref|XP_001957301.1| GF24122 [Drosophila ananassae]
gi|190624583|gb|EDV40107.1| GF24122 [Drosophila ananassae]
Length = 674
Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats.
Identities = 85/91 (93%), Positives = 89/91 (97%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SIS+CKNN ECIINKKNRT+CK+
Sbjct: 10 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISDCKNNGECIINKKNRTACKA 69
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
CRL+KCLMVGMSKSGSRYGRRSNWFKIHCLL
Sbjct: 70 CRLKKCLMVGMSKSGSRYGRRSNWFKIHCLL 100
>gi|383848131|ref|XP_003699705.1| PREDICTED: uncharacterized protein LOC100878095 [Megachile
rotundata]
Length = 422
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 86/101 (85%), Positives = 93/101 (92%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ C+VCGEPAAGFHFGAFTCEGCKSFFGR+YNNL SISECKN C+INKKNRT+CK+
Sbjct: 54 MNQLCRVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLGSISECKNGGVCVINKKNRTACKA 113
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQ 101
CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ QA+ +
Sbjct: 114 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQSHQAQTR 154
>gi|307213125|gb|EFN88647.1| Protein embryonic gonad [Harpegnathos saltator]
Length = 435
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 86/101 (85%), Positives = 93/101 (92%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ C+VCGEPAAGFHFGAFTCEGCKSFFGR+YNNL SISECKN C+INKKNRT+CK+
Sbjct: 54 MNQLCRVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLGSISECKNGGVCVINKKNRTACKA 113
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQ 101
CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ QA+ +
Sbjct: 114 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQSHQAQTR 154
>gi|307171692|gb|EFN63427.1| Protein embryonic gonad [Camponotus floridanus]
Length = 438
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 86/101 (85%), Positives = 93/101 (92%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ C+VCGEPAAGFHFGAFTCEGCKSFFGR+YNNL SISECKN C+INKKNRT+CK+
Sbjct: 54 MNQLCRVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLGSISECKNGGVCVINKKNRTACKA 113
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQ 101
CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ QA+ +
Sbjct: 114 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQSHQAQNR 154
>gi|328710681|ref|XP_003244332.1| PREDICTED: hypothetical protein LOC100575402 [Acyrthosiphon
pisum]
Length = 489
Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats.
Identities = 86/94 (91%), Positives = 91/94 (96%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNNL SISECKNN EC+INKKNRTSCK+
Sbjct: 1 MNQQCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLSSISECKNNGECVINKKNRTSCKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQ+Q
Sbjct: 61 CRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQDQ 94
>gi|242019625|ref|XP_002430260.1| knirps related protein, putative [Pediculus humanus corporis]
gi|212515367|gb|EEB17522.1| knirps related protein, putative [Pediculus humanus corporis]
Length = 480
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 86/96 (89%), Positives = 93/96 (96%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ C+VCGEPAAGFHFGAFTCEGCKSFFGR+YNNL SI+ECKNN EC+INKKNRT+CK+
Sbjct: 32 MNQLCRVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLGSITECKNNGECVINKKNRTACKA 91
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQ 96
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQEQQQ
Sbjct: 92 CRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQQQ 127
>gi|28574803|ref|NP_788552.1| knirps-like [Drosophila melanogaster]
gi|125519|sp|P13054.1|KNRL_DROME RecName: Full=Knirps-related protein; AltName: Full=Nuclear
receptor subfamily 0 group A member 2
gi|8156|emb|CAA32365.1| unnamed protein product [Drosophila melanogaster]
gi|18447289|gb|AAL68221.1| LD23140p [Drosophila melanogaster]
gi|23094177|gb|AAF51627.2| knirps-like [Drosophila melanogaster]
gi|220942344|gb|ACL83715.1| knrl-PA [synthetic construct]
gi|220960286|gb|ACL92679.1| knrl-PA [synthetic construct]
gi|226215|prf||1501350A knirps related gene
Length = 647
Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats.
Identities = 85/91 (93%), Positives = 89/91 (97%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SIS+CKNN ECIINKKNRT+CK+
Sbjct: 10 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISDCKNNGECIINKKNRTACKA 69
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
CRL+KCLMVGMSKSGSRYGRRSNWFKIHCLL
Sbjct: 70 CRLKKCLMVGMSKSGSRYGRRSNWFKIHCLL 100
>gi|195591922|ref|XP_002085685.1| GD12173 [Drosophila simulans]
gi|194197694|gb|EDX11270.1| GD12173 [Drosophila simulans]
Length = 599
Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats.
Identities = 85/91 (93%), Positives = 89/91 (97%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SIS+CKNN ECIINKKNRT+CK+
Sbjct: 10 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISDCKNNGECIINKKNRTACKA 69
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
CRL+KCLMVGMSKSGSRYGRRSNWFKIHCLL
Sbjct: 70 CRLKKCLMVGMSKSGSRYGRRSNWFKIHCLL 100
>gi|195348321|ref|XP_002040697.1| GM22199 [Drosophila sechellia]
gi|194122207|gb|EDW44250.1| GM22199 [Drosophila sechellia]
Length = 643
Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats.
Identities = 85/91 (93%), Positives = 89/91 (97%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SIS+CKNN ECIINKKNRT+CK+
Sbjct: 10 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISDCKNNGECIINKKNRTACKA 69
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
CRL+KCLMVGMSKSGSRYGRRSNWFKIHCLL
Sbjct: 70 CRLKKCLMVGMSKSGSRYGRRSNWFKIHCLL 100
>gi|322802257|gb|EFZ22653.1| hypothetical protein SINV_02652 [Solenopsis invicta]
Length = 382
Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 87/99 (87%), Positives = 93/99 (93%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ C+VCGEPAAGFHFGAFTCEGCKSFFGR+YNNL SISECKN C+INKKNRT+CK+
Sbjct: 1 MNQLCRVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLGSISECKNGGVCVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAE 99
CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ QQA+
Sbjct: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQSQQAQ 99
>gi|118781506|ref|XP_001230804.1| AGAP010438-PA [Anopheles gambiae str. PEST]
gi|116129982|gb|EAU77163.1| AGAP010438-PA [Anopheles gambiae str. PEST]
Length = 98
Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 92/98 (93%), Positives = 94/98 (95%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SISECKNN ECIINKKNRT+CK+
Sbjct: 1 MNQQCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISECKNNGECIINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQA 98
CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQ A
Sbjct: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQAA 98
>gi|195020902|ref|XP_001985290.1| GH16982 [Drosophila grimshawi]
gi|193898772|gb|EDV97638.1| GH16982 [Drosophila grimshawi]
Length = 682
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 85/91 (93%), Positives = 89/91 (97%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SIS+CKNN ECIINKKNRT+CK+
Sbjct: 10 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISDCKNNGECIINKKNRTACKA 69
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
CRL+KCLMVGMSKSGSRYGRRSNWFKIHCLL
Sbjct: 70 CRLKKCLMVGMSKSGSRYGRRSNWFKIHCLL 100
>gi|195379752|ref|XP_002048640.1| GJ11245 [Drosophila virilis]
gi|194155798|gb|EDW70982.1| GJ11245 [Drosophila virilis]
Length = 367
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 82/95 (86%), Positives = 92/95 (96%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNN+P+I+ CK+N +C+INKKNRT+CK+
Sbjct: 1 MNQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIPAIAGCKHNGDCVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQEQQ
Sbjct: 61 CRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
>gi|195127658|ref|XP_002008285.1| GI11900 [Drosophila mojavensis]
gi|193919894|gb|EDW18761.1| GI11900 [Drosophila mojavensis]
Length = 671
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 85/91 (93%), Positives = 89/91 (97%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SIS+CKNN ECIINKKNRT+CK+
Sbjct: 10 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISDCKNNGECIINKKNRTACKA 69
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
CRL+KCLMVGMSKSGSRYGRRSNWFKIHCLL
Sbjct: 70 CRLKKCLMVGMSKSGSRYGRRSNWFKIHCLL 100
>gi|297522150|gb|ADI44344.1| knirps-like protein [Clogmia albipunctata]
Length = 302
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/142 (72%), Positives = 109/142 (76%), Gaps = 5/142 (3%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SISECKNN EC+INKKNRT+CK+
Sbjct: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISECKNNGECVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQT----ERTKLGHP-DLLLK 115
CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQ A +T HP L L
Sbjct: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQAAAAAAASGNRKTPPSHPTGLPLG 120
Query: 116 LDKFTNNNTIVTNNNLILQLLQ 137
T NN L+L L+
Sbjct: 121 FHPSTGFTMQRPNNELMLLGLE 142
>gi|270004099|gb|EFA00547.1| hypothetical protein TcasGA2_TC003413 [Tribolium castaneum]
Length = 430
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/91 (94%), Positives = 89/91 (97%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SISECKNN EC+INKKNRT+CK+
Sbjct: 101 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISECKNNGECVINKKNRTACKA 160
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL
Sbjct: 161 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 191
>gi|195440488|ref|XP_002068074.1| GK10566 [Drosophila willistoni]
gi|194164159|gb|EDW79060.1| GK10566 [Drosophila willistoni]
Length = 666
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 85/91 (93%), Positives = 89/91 (97%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SIS+CKNN ECIINKKNRT+CK+
Sbjct: 10 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISDCKNNGECIINKKNRTACKA 69
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
CRL+KCLMVGMSKSGSRYGRRSNWFKIHCLL
Sbjct: 70 CRLKKCLMVGMSKSGSRYGRRSNWFKIHCLL 100
>gi|195378652|ref|XP_002048097.1| GJ13774 [Drosophila virilis]
gi|194155255|gb|EDW70439.1| GJ13774 [Drosophila virilis]
Length = 654
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 85/91 (93%), Positives = 89/91 (97%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SIS+CKNN ECIINKKNRT+CK+
Sbjct: 10 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISDCKNNGECIINKKNRTACKA 69
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
CRL+KCLMVGMSKSGSRYGRRSNWFKIHCLL
Sbjct: 70 CRLKKCLMVGMSKSGSRYGRRSNWFKIHCLL 100
>gi|194875072|ref|XP_001973520.1| GG13294 [Drosophila erecta]
gi|190655303|gb|EDV52546.1| GG13294 [Drosophila erecta]
Length = 643
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 85/91 (93%), Positives = 89/91 (97%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SIS+CKNN ECIINKKNRT+CK+
Sbjct: 10 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISDCKNNGECIINKKNRTACKA 69
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
CRL+KCLMVGMSKSGSRYGRRSNWFKIHCLL
Sbjct: 70 CRLKKCLMVGMSKSGSRYGRRSNWFKIHCLL 100
>gi|198463927|ref|XP_001352999.2| GA18413 [Drosophila pseudoobscura pseudoobscura]
gi|198151467|gb|EAL30500.2| GA18413 [Drosophila pseudoobscura pseudoobscura]
Length = 705
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 84/91 (92%), Positives = 89/91 (97%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SI++CKNN ECIINKKNRT+CK+
Sbjct: 10 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSITDCKNNGECIINKKNRTACKA 69
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
CRL+KCLMVGMSKSGSRYGRRSNWFKIHCLL
Sbjct: 70 CRLKKCLMVGMSKSGSRYGRRSNWFKIHCLL 100
>gi|157128754|ref|XP_001661506.1| hypothetical protein AaeL_AAEL011231 [Aedes aegypti]
gi|108872484|gb|EAT36709.1| AAEL011231-PA [Aedes aegypti]
Length = 447
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/112 (86%), Positives = 101/112 (90%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SISECKNN ECIINKKNRT+CK+
Sbjct: 1 MNQQCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISECKNNGECIINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQ A+QQ K G P +
Sbjct: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQAAQQQAANHKAGAPPV 112
>gi|190360719|ref|NP_001121967.1| knirps [Tribolium castaneum]
gi|189406375|emb|CAQ57531.1| hypothetical protein [Tribolium castaneum]
Length = 330
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 86/91 (94%), Positives = 89/91 (97%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SISECKNN EC+INKKNRT+CK+
Sbjct: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISECKNNGECVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL
Sbjct: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
>gi|110759896|ref|XP_001120662.1| PREDICTED: hypothetical protein LOC724765 [Apis mellifera]
Length = 422
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 85/94 (90%), Positives = 89/94 (94%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNNL SISECKN C+INKKNRT+CK+
Sbjct: 1 MNQQCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLGSISECKNGGVCVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ
Sbjct: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
>gi|340719217|ref|XP_003398052.1| PREDICTED: hypothetical protein LOC100648906 isoform 1 [Bombus
terrestris]
Length = 425
Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats.
Identities = 86/102 (84%), Positives = 91/102 (89%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNNL SISECKN C+INKKNRTSCK+
Sbjct: 1 MNQVCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLGSISECKNGGVCVINKKNRTSCKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQT 102
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQEQ + T
Sbjct: 61 CRLRKCLVVGMSKSGSRYGRRSNWFKIHCLLQEQTNGNQNMT 102
>gi|195591928|ref|XP_002085688.1| kni [Drosophila simulans]
gi|194197697|gb|EDX11273.1| kni [Drosophila simulans]
Length = 378
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 88/114 (77%), Positives = 97/114 (85%), Gaps = 1/114 (0%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNN+ +ISECKN +CII+KKNRT+CK+
Sbjct: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNEGKCIIDKKNRTTCKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQE-QQQQAEQQTERTKLGHPDLL 113
CRLRKC VGMSK GSRYGRRSNWFKIHCLLQE +QQQ + LG+P L
Sbjct: 61 CRLRKCYNVGMSKGGSRYGRRSNWFKIHCLLQEHKQQQVPRHPHMPLLGYPSYL 114
>gi|345494163|ref|XP_001604969.2| PREDICTED: hypothetical protein LOC100121357 [Nasonia
vitripennis]
Length = 433
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 85/94 (90%), Positives = 89/94 (94%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNNL SISECKN C+INKKNRT+CK+
Sbjct: 1 MNQQCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLGSISECKNGGVCVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ
Sbjct: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
>gi|194749757|ref|XP_001957303.1| GF24121 [Drosophila ananassae]
gi|190624585|gb|EDV40109.1| GF24121 [Drosophila ananassae]
Length = 446
Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats.
Identities = 82/96 (85%), Positives = 89/96 (92%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNN+ +ISECKN +CII+KKNRT+CK+
Sbjct: 6 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNEGKCIIDKKNRTTCKA 65
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQ 96
CRLRKC VGMSK GSRYGRRSNWFKIHCLLQE +Q
Sbjct: 66 CRLRKCYNVGMSKGGSRYGRRSNWFKIHCLLQEHEQ 101
>gi|340719219|ref|XP_003398053.1| PREDICTED: hypothetical protein LOC100648906 isoform 2 [Bombus
terrestris]
Length = 428
Score = 191 bits (485), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 85/94 (90%), Positives = 89/94 (94%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNNL SISECKN C+INKKNRTSCK+
Sbjct: 4 MNQVCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLGSISECKNGGVCVINKKNRTSCKA 63
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQEQ
Sbjct: 64 CRLRKCLVVGMSKSGSRYGRRSNWFKIHCLLQEQ 97
>gi|350408785|ref|XP_003488513.1| PREDICTED: hypothetical protein LOC100741739 [Bombus impatiens]
Length = 436
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 85/94 (90%), Positives = 89/94 (94%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNNL SISECKN C+INKKNRTSCK+
Sbjct: 4 MNQVCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLGSISECKNGGVCVINKKNRTSCKA 63
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQEQ
Sbjct: 64 CRLRKCLVVGMSKSGSRYGRRSNWFKIHCLLQEQ 97
>gi|125978949|ref|XP_001353507.1| GA20312 [Drosophila pseudoobscura pseudoobscura]
gi|54642270|gb|EAL31019.1| GA20312 [Drosophila pseudoobscura pseudoobscura]
Length = 390
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 82/98 (83%), Positives = 92/98 (93%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNN+ +I+ CK+N +C+INKKNRT+CK+
Sbjct: 1 MNQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAGCKHNGDCVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQA 98
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQEQQ A
Sbjct: 61 CRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQQSTA 98
>gi|167234449|ref|NP_001107839.1| eagle [Tribolium castaneum]
gi|270004095|gb|EFA00543.1| hypothetical protein TcasGA2_TC003409 [Tribolium castaneum]
Length = 299
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 84/93 (90%), Positives = 90/93 (96%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNN+ SISECKNN EC+INKKNRT+CK+
Sbjct: 1 MNQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNISSISECKNNGECVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQE 93
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQE
Sbjct: 61 CRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQE 93
>gi|195160944|ref|XP_002021331.1| GL24862 [Drosophila persimilis]
gi|194118444|gb|EDW40487.1| GL24862 [Drosophila persimilis]
Length = 390
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 82/98 (83%), Positives = 92/98 (93%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNN+ +I+ CK+N +C+INKKNRT+CK+
Sbjct: 1 MNQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAGCKHNGDCVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQA 98
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQEQQ A
Sbjct: 61 CRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQQSTA 98
>gi|195128873|ref|XP_002008884.1| GI11566 [Drosophila mojavensis]
gi|193920493|gb|EDW19360.1| GI11566 [Drosophila mojavensis]
Length = 377
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 81/95 (85%), Positives = 91/95 (95%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNN+ +I+ CK+N +C+INKKNRT+CK+
Sbjct: 1 MNQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAGCKHNGDCVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQEQQ
Sbjct: 61 CRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
>gi|383848129|ref|XP_003699704.1| PREDICTED: uncharacterized protein LOC100877981 [Megachile
rotundata]
Length = 420
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 85/94 (90%), Positives = 89/94 (94%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNNL SISECKN C+INKKNRT+CK+
Sbjct: 1 MNQQCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLGSISECKNGGVCVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ
Sbjct: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
>gi|390979833|gb|AFM30922.1| KNIRPS2 [Parhyale hawaiensis]
Length = 692
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 80/94 (85%), Positives = 87/94 (92%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVC EPAAGFHFGAFTCEGCKSFFGR+YNNL I ECKN +C+INK+NRTSCK+
Sbjct: 1 MNQLCKVCAEPAAGFHFGAFTCEGCKSFFGRTYNNLSQIHECKNGGQCVINKQNRTSCKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
CRLRKCL+VGMSK+GSRYGRRSNWFKIHCLLQEQ
Sbjct: 61 CRLRKCLVVGMSKTGSRYGRRSNWFKIHCLLQEQ 94
>gi|357631282|gb|EHJ78872.1| hypothetical protein KGM_10290 [Danaus plexippus]
Length = 368
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/91 (92%), Positives = 88/91 (96%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SI+ECKNN EC+INKKNRT+CK+
Sbjct: 1 MNQKCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLNSITECKNNGECVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL
Sbjct: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
>gi|195378648|ref|XP_002048095.1| knirps [Drosophila virilis]
gi|194155253|gb|EDW70437.1| knirps [Drosophila virilis]
Length = 486
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 82/96 (85%), Positives = 90/96 (93%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNN+ +ISECKN+ +CII+KKNRT+CK+
Sbjct: 6 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNDGKCIIDKKNRTTCKA 65
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQ 96
CRLRKC VGMSK GSRYGRRSNWFKIHCLLQE +Q
Sbjct: 66 CRLRKCYNVGMSKGGSRYGRRSNWFKIHCLLQEHEQ 101
>gi|226214|prf||1501349A hormone receptor-like protein
Length = 429
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 82/96 (85%), Positives = 89/96 (92%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNN+ +ISECKN +CII+KKNRT+CK+
Sbjct: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNEGKCIIDKKNRTTCKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQ 96
CRLRKC VGMSK GSRYGRRSNWFKIHCLLQE +Q
Sbjct: 61 CRLRKCYNVGMSKGGSRYGRRSNWFKIHCLLQEHEQ 96
>gi|17737693|ref|NP_524187.1| knirps [Drosophila melanogaster]
gi|125509|sp|P10734.1|KNIR_DROME RecName: Full=Zygotic gap protein knirps; AltName: Full=Nuclear
receptor subfamily 0 group A member 1
gi|8154|emb|CAA31709.1| knirps protein [Drosophila melanogaster]
gi|10726915|gb|AAF51629.2| knirps [Drosophila melanogaster]
gi|21429960|gb|AAM50658.1| GH19318p [Drosophila melanogaster]
gi|220942298|gb|ACL83692.1| kni-PA [synthetic construct]
gi|220952770|gb|ACL88928.1| kni-PA [synthetic construct]
Length = 429
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 82/96 (85%), Positives = 89/96 (92%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNN+ +ISECKN +CII+KKNRT+CK+
Sbjct: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNEGKCIIDKKNRTTCKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQ 96
CRLRKC VGMSK GSRYGRRSNWFKIHCLLQE +Q
Sbjct: 61 CRLRKCYNVGMSKGGSRYGRRSNWFKIHCLLQEHEQ 96
>gi|195495827|ref|XP_002095433.1| GE22392 [Drosophila yakuba]
gi|194181534|gb|EDW95145.1| GE22392 [Drosophila yakuba]
Length = 657
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 85/91 (93%), Positives = 89/91 (97%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SIS+CKNN ECIINKKNRT+CK+
Sbjct: 10 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISDCKNNGECIINKKNRTACKA 69
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
CRL+KCLMVGMSKSGSRYGRRSNWFKIHCLL
Sbjct: 70 CRLKKCLMVGMSKSGSRYGRRSNWFKIHCLL 100
>gi|195015906|ref|XP_001984300.1| GH16373 [Drosophila grimshawi]
gi|193897782|gb|EDV96648.1| GH16373 [Drosophila grimshawi]
Length = 383
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 81/95 (85%), Positives = 91/95 (95%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNN+ +I+ CK+N +C+INKKNRT+CK+
Sbjct: 1 MNQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAGCKHNGDCVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQEQQ
Sbjct: 61 CRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
>gi|2500912|sp|Q24753.1|KNIR_DROVI RecName: Full=Zygotic gap protein knirps; AltName: Full=Nuclear
receptor subfamily 0 group A member 1
gi|537508|gb|AAA66190.1| DNA-binding protein [Drosophila virilis]
Length = 481
Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats.
Identities = 82/96 (85%), Positives = 90/96 (93%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNN+ +ISECKN+ +CII+KKNRT+CK+
Sbjct: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNDGKCIIDKKNRTTCKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQ 96
CRLRKC VGMSK GSRYGRRSNWFKIHCLLQE +Q
Sbjct: 61 CRLRKCYNVGMSKGGSRYGRRSNWFKIHCLLQEHEQ 96
>gi|194875090|ref|XP_001973525.1| GG13292 [Drosophila erecta]
gi|190655308|gb|EDV52551.1| GG13292 [Drosophila erecta]
Length = 433
Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats.
Identities = 82/96 (85%), Positives = 89/96 (92%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNN+ +ISECKN +CII+KKNRT+CK+
Sbjct: 6 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNEGKCIIDKKNRTTCKA 65
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQ 96
CRLRKC VGMSK GSRYGRRSNWFKIHCLLQE +Q
Sbjct: 66 CRLRKCYNVGMSKGGSRYGRRSNWFKIHCLLQEHEQ 101
>gi|198463937|ref|XP_001353002.2| GA18381 [Drosophila pseudoobscura pseudoobscura]
gi|198151472|gb|EAL30503.2| GA18381 [Drosophila pseudoobscura pseudoobscura]
Length = 493
Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats.
Identities = 81/96 (84%), Positives = 90/96 (93%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNN+ +ISECKN+ +C+I+KKNRT+CK+
Sbjct: 6 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNDGKCVIDKKNRTTCKA 65
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQ 96
CRLRKC VGMSK GSRYGRRSNWFKIHCLLQE +Q
Sbjct: 66 CRLRKCYNVGMSKGGSRYGRRSNWFKIHCLLQEHEQ 101
>gi|195495815|ref|XP_002095428.1| GE22389 [Drosophila yakuba]
gi|194181529|gb|EDW95140.1| GE22389 [Drosophila yakuba]
Length = 433
Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats.
Identities = 82/96 (85%), Positives = 89/96 (92%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNN+ +ISECKN +CII+KKNRT+CK+
Sbjct: 6 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNEGKCIIDKKNRTTCKA 65
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQ 96
CRLRKC VGMSK GSRYGRRSNWFKIHCLLQE +Q
Sbjct: 66 CRLRKCYNVGMSKGGSRYGRRSNWFKIHCLLQEHEQ 101
>gi|195348331|ref|XP_002040702.1| kni [Drosophila sechellia]
gi|194122212|gb|EDW44255.1| kni [Drosophila sechellia]
Length = 431
Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats.
Identities = 82/96 (85%), Positives = 89/96 (92%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNN+ +ISECKN +CII+KKNRT+CK+
Sbjct: 5 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNEGKCIIDKKNRTTCKA 64
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQ 96
CRLRKC VGMSK GSRYGRRSNWFKIHCLLQE +Q
Sbjct: 65 CRLRKCYNVGMSKGGSRYGRRSNWFKIHCLLQEHEQ 100
>gi|194875976|ref|XP_001973690.1| GG16225 [Drosophila erecta]
gi|190655473|gb|EDV52716.1| GG16225 [Drosophila erecta]
Length = 376
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 81/95 (85%), Positives = 91/95 (95%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNN+ +I+ CK+N +C+INKKNRT+CK+
Sbjct: 1 MNQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAGCKHNGDCVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQEQQ
Sbjct: 61 CRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
>gi|17737723|ref|NP_524206.1| eagle, isoform A [Drosophila melanogaster]
gi|24668379|ref|NP_730689.1| eagle, isoform B [Drosophila melanogaster]
gi|150421545|sp|P15370.2|EGON_DROME RecName: Full=Protein embryonic gonad; AltName: Full=Nuclear
receptor subfamily 0 group A member 3; AltName:
Full=Protein eagle; AltName: Full=Protein spready
gi|7296497|gb|AAF51783.1| eagle, isoform A [Drosophila melanogaster]
gi|23094280|gb|AAN12188.1| eagle, isoform B [Drosophila melanogaster]
gi|115646642|gb|ABI34227.2| RT01112p [Drosophila melanogaster]
Length = 373
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 81/95 (85%), Positives = 91/95 (95%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNN+ +I+ CK+N +C+INKKNRT+CK+
Sbjct: 1 MNQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAGCKHNGDCVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQEQQ
Sbjct: 61 CRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
>gi|7924|emb|CAA34626.1| egon protein [Drosophila melanogaster]
gi|1255591|dbj|BAA07742.1| eagle [Drosophila melanogaster]
gi|1255593|dbj|BAA07743.1| eagle [Drosophila melanogaster]
Length = 373
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 81/95 (85%), Positives = 91/95 (95%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNN+ +I+ CK+N +C+INKKNRT+CK+
Sbjct: 1 MNQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAGCKHNGDCVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQEQQ
Sbjct: 61 CRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
>gi|194747846|ref|XP_001956361.1| GF25170 [Drosophila ananassae]
gi|190623643|gb|EDV39167.1| GF25170 [Drosophila ananassae]
Length = 376
Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 81/95 (85%), Positives = 91/95 (95%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNN+ +I+ CK+N +C+INKKNRT+CK+
Sbjct: 1 MNQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAGCKHNGDCVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQEQQ
Sbjct: 61 CRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
>gi|195020891|ref|XP_001985288.1| GH16981 [Drosophila grimshawi]
gi|193898770|gb|EDV97636.1| GH16981 [Drosophila grimshawi]
Length = 509
Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats.
Identities = 82/96 (85%), Positives = 90/96 (93%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNN+ +ISECKN+ +CII+KKNRT+CK+
Sbjct: 6 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNDGKCIIDKKNRTTCKA 65
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQ 96
CRLRKC VGMSK GSRYGRRSNWFKIHCLLQE +Q
Sbjct: 66 CRLRKCYNVGMSKGGSRYGRRSNWFKIHCLLQEHEQ 101
>gi|41223451|emb|CAF21851.1| zinc finger transcription factor [Tribolium castaneum]
Length = 228
Score = 187 bits (476), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 90/114 (78%), Positives = 96/114 (84%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNN+ SISECKNN EC+INKKNRT+CK+
Sbjct: 1 MNQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNISSISECKNNGECVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDLLL 114
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQEQQQ L P L
Sbjct: 61 CRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQQQAGANMAAAANLLRPHPYL 114
>gi|321465949|gb|EFX76947.1| transcriptional regulator knirps-related-like protein [Daphnia
pulex]
Length = 524
Score = 187 bits (476), Expect = 9e-46, Method: Composition-based stats.
Identities = 83/94 (88%), Positives = 89/94 (94%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL ISECKN +C+INKKNRTSCK+
Sbjct: 1 MNQLCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSVISECKNGGQCVINKKNRTSCKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
CRLRKCL+VGMSKSGSRYGRRSNWFK+HCL+QEQ
Sbjct: 61 CRLRKCLLVGMSKSGSRYGRRSNWFKLHCLMQEQ 94
>gi|350408783|ref|XP_003488512.1| PREDICTED: knirps-related protein-like [Bombus impatiens]
Length = 423
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 82/91 (90%), Positives = 87/91 (95%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SI+ECKN EC+INKKNRT+CK+
Sbjct: 1 MNQQCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSITECKNGGECVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLL
Sbjct: 61 CRLRKCLLVGMSKSGSRYGRRSNWFKIHCLL 91
>gi|195480749|ref|XP_002086693.1| GE23274 [Drosophila yakuba]
gi|194186483|gb|EDX00095.1| GE23274 [Drosophila yakuba]
Length = 461
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 81/95 (85%), Positives = 91/95 (95%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNN+ +I+ CK+N +C+INKKNRT+CK+
Sbjct: 86 MNQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAGCKHNGDCVINKKNRTACKA 145
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQEQQ
Sbjct: 146 CRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQQ 180
>gi|195127668|ref|XP_002008290.1| GI11896 [Drosophila mojavensis]
gi|193919899|gb|EDW18766.1| GI11896 [Drosophila mojavensis]
Length = 469
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 82/96 (85%), Positives = 90/96 (93%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNN+ +ISECKN+ +CII+KKNRT+CK+
Sbjct: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNDGKCIIDKKNRTTCKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQ 96
CRLRKC VGMSK GSRYGRRSNWFKIHCLLQE +Q
Sbjct: 61 CRLRKCYNVGMSKGGSRYGRRSNWFKIHCLLQEHEQ 96
>gi|195172195|ref|XP_002026884.1| GL12762 [Drosophila persimilis]
gi|194112652|gb|EDW34695.1| GL12762 [Drosophila persimilis]
Length = 455
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 81/96 (84%), Positives = 90/96 (93%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNN+ +ISECKN+ +C+I+KKNRT+CK+
Sbjct: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNDGKCVIDKKNRTTCKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQ 96
CRLRKC VGMSK GSRYGRRSNWFKIHCLLQE +Q
Sbjct: 61 CRLRKCYNVGMSKGGSRYGRRSNWFKIHCLLQEHEQ 96
>gi|391338822|ref|XP_003743754.1| PREDICTED: uncharacterized protein LOC100907031 [Metaseiulus
occidentalis]
Length = 388
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 81/107 (75%), Positives = 96/107 (89%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
++Q CKVCGEPAAG+HFGAFTCEGCKSFFGR+YNNL ++ ECKNN +CIINKKNRTSCKS
Sbjct: 36 VSQLCKVCGEPAAGYHFGAFTCEGCKSFFGRTYNNLSALGECKNNGQCIINKKNRTSCKS 95
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKL 107
CRL+KCL+VGMSKSGSRYGRRSNWFKIHCL+Q+Q + + + E+ L
Sbjct: 96 CRLKKCLLVGMSKSGSRYGRRSNWFKIHCLIQDQAEMSSRLGEQQAL 142
>gi|195495408|ref|XP_002095254.1| GE19793 [Drosophila yakuba]
gi|194181355|gb|EDW94966.1| GE19793 [Drosophila yakuba]
Length = 449
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 81/95 (85%), Positives = 91/95 (95%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNN+ +I+ CK+N +C+INKKNRT+CK+
Sbjct: 74 MNQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAGCKHNGDCVINKKNRTACKA 133
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQEQQ
Sbjct: 134 CRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQQ 168
>gi|66518356|ref|XP_395932.2| PREDICTED: knirps-related protein [Apis mellifera]
Length = 420
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 83/91 (91%), Positives = 87/91 (95%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SISECKN EC+INKKNRT+CK+
Sbjct: 1 MNQQCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISECKNGGECVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLL
Sbjct: 61 CRLRKCLLVGMSKSGSRYGRRSNWFKIHCLL 91
>gi|383848229|ref|XP_003699754.1| PREDICTED: knirps-related protein-like [Megachile rotundata]
Length = 429
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 83/91 (91%), Positives = 87/91 (95%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SISECKN EC+INKKNRT+CK+
Sbjct: 1 MNQQCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISECKNGGECVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLL
Sbjct: 61 CRLRKCLLVGMSKSGSRYGRRSNWFKIHCLL 91
>gi|328726671|ref|XP_003248994.1| PREDICTED: hypothetical protein LOC100572461 [Acyrthosiphon
pisum]
Length = 421
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 84/93 (90%), Positives = 90/93 (96%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M+Q C+VCGEPAAGFHFGAFTCEGCKSFFGR+YNNL SISECKNN EC+INKKNRTSCK+
Sbjct: 1 MSQLCRVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLSSISECKNNGECVINKKNRTSCKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQE 93
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQE
Sbjct: 61 CRLRKCLVVGMSKSGSRYGRRSNWFKIHCLLQE 93
>gi|242019631|ref|XP_002430263.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212515370|gb|EEB17525.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 384
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 85/91 (93%), Positives = 88/91 (96%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SI+ECKNN ECIINKKNRT+CKS
Sbjct: 1 MNQQCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLNSITECKNNGECIINKKNRTACKS 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLL
Sbjct: 61 CRLRKCLLVGMSKSGSRYGRRSNWFKIHCLL 91
>gi|357601778|gb|EHJ63149.1| putative zinc finger transcription factor [Danaus plexippus]
Length = 344
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 81/89 (91%), Positives = 86/89 (96%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNNL SISECKNN EC+INKKNRT+CK+
Sbjct: 12 MNQQCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLSSISECKNNGECVINKKNRTACKA 71
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHC 89
CRLRKCL+VGMSKSGSRYGRRSNWFKIHC
Sbjct: 72 CRLRKCLLVGMSKSGSRYGRRSNWFKIHC 100
>gi|195592282|ref|XP_002085864.1| GD15001 [Drosophila simulans]
gi|194197873|gb|EDX11449.1| GD15001 [Drosophila simulans]
Length = 388
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 82/104 (78%), Positives = 94/104 (90%), Gaps = 2/104 (1%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNN+ +I+ CK+N +C+INKKNRT+CK+
Sbjct: 9 MNQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAGCKHNGDCVINKKNRTACKA 68
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ--QQQAEQQT 102
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQ + +EQQT
Sbjct: 69 CRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQSSILPRASEQQT 112
>gi|297522152|gb|ADI44345.1| egon protein [Clogmia albipunctata]
Length = 325
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 82/91 (90%), Positives = 88/91 (96%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNNL SISECKNN EC+INKKNRT+CK+
Sbjct: 1 MNQQCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLSSISECKNNGECVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
CRLRKC++VGMSKSGSRYGRRSNWFKIHCLL
Sbjct: 61 CRLRKCILVGMSKSGSRYGRRSNWFKIHCLL 91
>gi|328706525|ref|XP_003243120.1| PREDICTED: nuclear receptor subfamily 1 group D member 2-like
[Acyrthosiphon pisum]
Length = 212
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 84/93 (90%), Positives = 90/93 (96%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M+Q C+VCGEPAAGFHFGAFTCEGCKSFFGR+YNNL SISECKNN EC+INKKNRTSCK+
Sbjct: 34 MSQLCRVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLSSISECKNNGECVINKKNRTSCKA 93
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQE 93
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQE
Sbjct: 94 CRLRKCLVVGMSKSGSRYGRRSNWFKIHCLLQE 126
>gi|195440492|ref|XP_002068076.1| GK10545 [Drosophila willistoni]
gi|194164161|gb|EDW79062.1| GK10545 [Drosophila willistoni]
Length = 458
Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats.
Identities = 81/95 (85%), Positives = 88/95 (92%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNN+ +ISECKN +CII+KKNRT+CK+
Sbjct: 6 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNEGKCIIDKKNRTTCKA 65
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
CRLRKC VGMSK GSRYGRRSNWFKIHCLLQE +
Sbjct: 66 CRLRKCYNVGMSKGGSRYGRRSNWFKIHCLLQEHE 100
>gi|390979831|gb|AFM30921.1| KNIRPS1 [Parhyale hawaiensis]
Length = 397
Score = 184 bits (468), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 82/103 (79%), Positives = 88/103 (85%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVC EPAAGFHFGAFTCEGCKSFFGR+YNNL I ECKN +C+INK+NRTSCK+
Sbjct: 9 MNQLCKVCSEPAAGFHFGAFTCEGCKSFFGRTYNNLSQIHECKNGGQCVINKQNRTSCKA 68
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
CRLRKCL VGMSKSGSRYGRRSNWFKIHC LQEQ + TE
Sbjct: 69 CRLRKCLFVGMSKSGSRYGRRSNWFKIHCALQEQAANLNRSTE 111
>gi|195428038|ref|XP_002062082.1| GK17344 [Drosophila willistoni]
gi|194158167|gb|EDW73068.1| GK17344 [Drosophila willistoni]
Length = 377
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 79/93 (84%), Positives = 89/93 (95%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNN+ +I+ CK+N +C+INKKNRT+CK+
Sbjct: 1 MNQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAGCKHNGDCVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQE 93
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQE
Sbjct: 61 CRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQE 93
>gi|321465947|gb|EFX76945.1| transcriptional regulator knirps-related-like protein [Daphnia
pulex]
Length = 390
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 79/94 (84%), Positives = 89/94 (94%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+Y+N+ +I +CKN +C+INKKNRT+CK+
Sbjct: 1 MNQKCKVCGEPAAGFHFGAFTCEGCKSFFGRTYSNVSAIGDCKNGGQCVINKKNRTTCKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQEQ
Sbjct: 61 CRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
>gi|307171696|gb|EFN63431.1| Knirps-related protein [Camponotus floridanus]
Length = 406
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 82/91 (90%), Positives = 86/91 (94%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SI+ECKN EC+INKKNRT+CK+
Sbjct: 1 MNQQCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLNSIAECKNGGECVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
CRLRKCL VGMSKSGSRYGRRSNWFKIHCLL
Sbjct: 61 CRLRKCLHVGMSKSGSRYGRRSNWFKIHCLL 91
>gi|307213119|gb|EFN88641.1| Knirps-related protein [Harpegnathos saltator]
Length = 480
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 80/89 (89%), Positives = 84/89 (94%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SI+ECKN EC+INKKNRT+CK+
Sbjct: 1 MNQQCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLNSIAECKNGGECVINKKNRTTCKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHC 89
CRLRKCL VGMSKSGSRYGRRSNWFKIHC
Sbjct: 61 CRLRKCLFVGMSKSGSRYGRRSNWFKIHC 89
>gi|30266124|gb|AAP21572.1| knirps [Drosophila novamexicana]
Length = 122
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/96 (85%), Positives = 90/96 (93%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNN+ +ISECKN+ +CII+KKNRT+CK+
Sbjct: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNDGKCIIDKKNRTTCKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQ 96
CRLRKC VGMSK GSRYGRRSNWFKIHCLLQE +Q
Sbjct: 61 CRLRKCYNVGMSKGGSRYGRRSNWFKIHCLLQEHEQ 96
>gi|30038109|gb|AAP12718.1| knirps [Drosophila americana]
Length = 122
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/96 (85%), Positives = 90/96 (93%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNN+ +ISECKN+ +CII+KKNRT+CK+
Sbjct: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNDGKCIIDKKNRTTCKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQ 96
CRLRKC VGMSK GSRYGRRSNWFKIHCLLQE +Q
Sbjct: 61 CRLRKCYNVGMSKGGSRYGRRSNWFKIHCLLQEHEQ 96
>gi|296803351|gb|ADH51739.1| putative knirps protein [Episyrphus balteatus]
Length = 492
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 80/91 (87%), Positives = 86/91 (94%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SISECKN+ +C+I+KKNRT+CK+
Sbjct: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISECKNHGKCVIDKKNRTTCKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
CRLRKC VGMSK GSRYGRRSNWFKIHCLL
Sbjct: 61 CRLRKCYTVGMSKGGSRYGRRSNWFKIHCLL 91
>gi|332031571|gb|EGI71043.1| Knirps-related protein [Acromyrmex echinatior]
Length = 411
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 78/89 (87%), Positives = 85/89 (95%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SI++CKN+ +C+INKKNRT+CKS
Sbjct: 1 MNQQCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLNSIADCKNDGKCVINKKNRTACKS 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHC 89
CRLRKC+ VGMSKSGSRYGRRSNWFKIHC
Sbjct: 61 CRLRKCIFVGMSKSGSRYGRRSNWFKIHC 89
>gi|322802293|gb|EFZ22689.1| hypothetical protein SINV_08728 [Solenopsis invicta]
Length = 412
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 77/89 (86%), Positives = 85/89 (95%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL +I++CKN+ +C+INKKNRT+CKS
Sbjct: 2 MNQQCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLNTIADCKNDGKCVINKKNRTACKS 61
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHC 89
CRLRKC+ VGMSKSGSRYGRRSNWFKIHC
Sbjct: 62 CRLRKCIYVGMSKSGSRYGRRSNWFKIHC 90
>gi|307213123|gb|EFN88645.1| Knirps-related protein [Harpegnathos saltator]
Length = 159
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 79/97 (81%), Positives = 89/97 (91%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAG+HFGAFTCEGCKSFFGR+YNN +I++CKN N+C+INKKNRT+CKS
Sbjct: 1 MNQQCKVCGEPAAGYHFGAFTCEGCKSFFGRTYNNAGNIADCKNGNKCVINKKNRTTCKS 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQ 97
CRLRKC++VGMSKS SRYGRRSNWFKIHCLL EQ Q
Sbjct: 61 CRLRKCILVGMSKSSSRYGRRSNWFKIHCLLAEQSSQ 97
>gi|144227374|gb|ABO93447.1| knirps splice variant 4, partial [Strigamia maritima]
Length = 192
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 77/84 (91%), Positives = 81/84 (96%)
Query: 11 PAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVG 70
PAAGFHFGAFTCEGCKSFFGR+YNNL S+SECKNN CIINKKNRTSCKSCRLRKCL+VG
Sbjct: 1 PAAGFHFGAFTCEGCKSFFGRTYNNLSSLSECKNNGRCIINKKNRTSCKSCRLRKCLLVG 60
Query: 71 MSKSGSRYGRRSNWFKIHCLLQEQ 94
MSKSGSRYGRRSNWFKIHCLLQ+Q
Sbjct: 61 MSKSGSRYGRRSNWFKIHCLLQDQ 84
>gi|144227372|gb|ABO93446.1| knirps splice variant 3, partial [Strigamia maritima]
Length = 185
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 77/84 (91%), Positives = 81/84 (96%)
Query: 11 PAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVG 70
PAAGFHFGAFTCEGCKSFFGR+YNNL S+SECKNN CIINKKNRTSCKSCRLRKCL+VG
Sbjct: 1 PAAGFHFGAFTCEGCKSFFGRTYNNLSSLSECKNNGRCIINKKNRTSCKSCRLRKCLLVG 60
Query: 71 MSKSGSRYGRRSNWFKIHCLLQEQ 94
MSKSGSRYGRRSNWFKIHCLLQ+Q
Sbjct: 61 MSKSGSRYGRRSNWFKIHCLLQDQ 84
>gi|144227368|gb|ABO93444.1| knirps splice variant 1 [Strigamia maritima]
Length = 130
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/84 (91%), Positives = 81/84 (96%)
Query: 11 PAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVG 70
PAAGFHFGAFTCEGCKSFFGR+YNNL S+SECKNN CIINKKNRTSCKSCRLRKCL+VG
Sbjct: 1 PAAGFHFGAFTCEGCKSFFGRTYNNLSSLSECKNNGRCIINKKNRTSCKSCRLRKCLLVG 60
Query: 71 MSKSGSRYGRRSNWFKIHCLLQEQ 94
MSKSGSRYGRRSNWFKIHCLLQ+Q
Sbjct: 61 MSKSGSRYGRRSNWFKIHCLLQDQ 84
>gi|144227370|gb|ABO93445.1| knirps splice variant 2, partial [Strigamia maritima]
Length = 134
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/102 (79%), Positives = 85/102 (83%), Gaps = 2/102 (1%)
Query: 11 PAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVG 70
PAAGFHFGAFTCEGCKSFFGR+YNNL S+SECKNN CIINKKNRTSCKSCRLRKCL+VG
Sbjct: 1 PAAGFHFGAFTCEGCKSFFGRTYNNLSSLSECKNNGRCIINKKNRTSCKSCRLRKCLLVG 60
Query: 71 MSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
MSKSGSRYGRRSNWFKIHCLLQ+ Q A L P L
Sbjct: 61 MSKSGSRYGRRSNWFKIHCLLQD--QAALNAASHHPLDSPGL 100
>gi|225719164|gb|ACO15428.1| Zygotic gap protein knirps [Caligus clemensi]
Length = 208
Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 72/92 (78%), Positives = 83/92 (90%), Gaps = 2/92 (2%)
Query: 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRS--YNNLPSISECKNNNECIINKKNRTSCK 59
NQ C+VC EPAAG+HFGAFTCEGCKSFFGR+ +NL SISECKNN C+I+KKNRTSCK
Sbjct: 35 NQICRVCDEPAAGYHFGAFTCEGCKSFFGRTCGKSNLNSISECKNNYSCVIDKKNRTSCK 94
Query: 60 SCRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
+CRLRKCL VGMSK+GSRYGRRSNWFK+HC++
Sbjct: 95 ACRLRKCLRVGMSKAGSRYGRRSNWFKMHCVM 126
>gi|225711358|gb|ACO11525.1| Zygotic gap protein knirps [Caligus rogercresseyi]
Length = 223
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 72/92 (78%), Positives = 83/92 (90%), Gaps = 2/92 (2%)
Query: 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRS--YNNLPSISECKNNNECIINKKNRTSCK 59
NQ C+VC EPAAG+HFGAFTCEGCKSFFGR+ +NL SISECKNN C+I+KKNRTSCK
Sbjct: 42 NQICRVCDEPAAGYHFGAFTCEGCKSFFGRTCGKSNLNSISECKNNYSCVIDKKNRTSCK 101
Query: 60 SCRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
+CRLRKCL VGMSK+GSRYGRRSNWFK+HC++
Sbjct: 102 ACRLRKCLRVGMSKAGSRYGRRSNWFKMHCVM 133
>gi|301133183|gb|ADK63216.1| knirps1 [Oncopeltus fasciatus]
Length = 189
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/77 (93%), Positives = 75/77 (97%)
Query: 18 GAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGSR 77
GAFTCEGCKSFFGRSYNNL SISECKNN EC+INKKNRTSCK+CRLRKCL+VGMSKSGSR
Sbjct: 1 GAFTCEGCKSFFGRSYNNLGSISECKNNGECVINKKNRTSCKACRLRKCLLVGMSKSGSR 60
Query: 78 YGRRSNWFKIHCLLQEQ 94
YGRRSNWFKIHCLLQEQ
Sbjct: 61 YGRRSNWFKIHCLLQEQ 77
>gi|225709574|gb|ACO10633.1| embryonic gonad [Caligus rogercresseyi]
Length = 223
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 71/92 (77%), Positives = 82/92 (89%), Gaps = 2/92 (2%)
Query: 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRS--YNNLPSISECKNNNECIINKKNRTSCK 59
NQ C+VC EPAAG+HFGAFTCEGCKS FGR+ +NL SISECKNN C+I+KKNRTSCK
Sbjct: 42 NQICRVCDEPAAGYHFGAFTCEGCKSSFGRTCGKSNLNSISECKNNYSCVIDKKNRTSCK 101
Query: 60 SCRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
+CRLRKCL VGMSK+GSRYGRRSNWFK+HC++
Sbjct: 102 ACRLRKCLRVGMSKAGSRYGRRSNWFKMHCVM 133
>gi|195172187|ref|XP_002026880.1| GL12764 [Drosophila persimilis]
gi|194112648|gb|EDW34691.1| GL12764 [Drosophila persimilis]
Length = 707
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 69/91 (75%), Positives = 71/91 (78%), Gaps = 17/91 (18%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCK NN ECIINKKNRT K+
Sbjct: 30 MNQTCKVCGEPAAGFHFGAFTCEGCK-----------------NNGECIINKKNRTVGKA 72
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
CRL+KCLMVGMSKSGSRYGRRSNWFKIHCLL
Sbjct: 73 CRLKKCLMVGMSKSGSRYGRRSNWFKIHCLL 103
>gi|301133185|gb|ADK63217.1| knirps2 [Oncopeltus fasciatus]
Length = 234
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/73 (90%), Positives = 71/73 (97%)
Query: 25 CKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGSRYGRRSNW 84
CKSFFGRSYNNL SISECKNN EC+INKKNRTSCK+CRLRKCL+VGMSKSGSRYGRRSNW
Sbjct: 1 CKSFFGRSYNNLGSISECKNNGECVINKKNRTSCKACRLRKCLLVGMSKSGSRYGRRSNW 60
Query: 85 FKIHCLLQEQQQQ 97
FKIHCLLQEQ+Q+
Sbjct: 61 FKIHCLLQEQKQK 73
>gi|170037932|ref|XP_001846808.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167881340|gb|EDS44723.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 341
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/74 (86%), Positives = 69/74 (93%)
Query: 24 GCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGSRYGRRSN 83
G SFFGR+YNNL SISECKNN EC+INKKNRT+CK+CRLRKCL+VGMSKSGSRYGRRSN
Sbjct: 12 GTASFFGRTYNNLSSISECKNNGECVINKKNRTACKACRLRKCLVVGMSKSGSRYGRRSN 71
Query: 84 WFKIHCLLQEQQQQ 97
WFKIHCLLQEQQ Q
Sbjct: 72 WFKIHCLLQEQQAQ 85
>gi|312379606|gb|EFR25826.1| hypothetical protein AND_08487 [Anopheles darlingi]
Length = 844
Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 64/68 (94%), Positives = 66/68 (97%)
Query: 26 KSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGSRYGRRSNWF 85
KSFFGRSYNNL SISECKNN ECIINKKNRT+CK+CRLRKCLMVGMSKSGSRYGRRSNWF
Sbjct: 265 KSFFGRSYNNLSSISECKNNGECIINKKNRTACKACRLRKCLMVGMSKSGSRYGRRSNWF 324
Query: 86 KIHCLLQE 93
KIHCLLQE
Sbjct: 325 KIHCLLQE 332
>gi|242019629|ref|XP_002430262.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212515369|gb|EEB17524.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 366
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/103 (66%), Positives = 76/103 (73%), Gaps = 10/103 (9%)
Query: 27 SFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGSRYGRRSNWFK 86
SFFGR+YNNL SI+ECKNN EC+INKKNRT+CK+CRLRKCL+VGMSKSGSRYGRRSNWFK
Sbjct: 21 SFFGRTYNNLGSITECKNNGECVINKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFK 80
Query: 87 IHCLLQEQQQQAEQQTERTKLGHP----------DLLLKLDKF 119
IHCLLQEQ Q + G P + LL DKF
Sbjct: 81 IHCLLQEQSQNGTNRLNTNIFGSPPGFFPGSFLSNSLLSPDKF 123
>gi|380020371|ref|XP_003694060.1| PREDICTED: uncharacterized protein LOC100868611, partial [Apis
florea]
Length = 396
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 60/68 (88%), Positives = 64/68 (94%)
Query: 27 SFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGSRYGRRSNWFK 86
SFFGR+YNNL SISECKN C+INKKNRT+CK+CRLRKCLMVGMSKSGSRYGRRSNWFK
Sbjct: 1 SFFGRTYNNLGSISECKNGGVCVINKKNRTACKACRLRKCLMVGMSKSGSRYGRRSNWFK 60
Query: 87 IHCLLQEQ 94
IHCLLQEQ
Sbjct: 61 IHCLLQEQ 68
>gi|241603711|ref|XP_002405735.1| conserved hypothetical protein [Ixodes scapularis]
gi|215502562|gb|EEC12056.1| conserved hypothetical protein [Ixodes scapularis]
Length = 335
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 72/82 (87%)
Query: 27 SFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGSRYGRRSNWFK 86
SFFGR+YNNL ++ +CKN+ +C+INKKNRTSCKSCRL+KCLMVGMSKSGSRYGRRSNWFK
Sbjct: 25 SFFGRTYNNLAALGDCKNSGQCVINKKNRTSCKSCRLKKCLMVGMSKSGSRYGRRSNWFK 84
Query: 87 IHCLLQEQQQQAEQQTERTKLG 108
IHCL+Q+Q + + E+ +LG
Sbjct: 85 IHCLIQDQAEMNSRIAEQHQLG 106
>gi|340719221|ref|XP_003398054.1| PREDICTED: hypothetical protein LOC100649097 [Bombus terrestris]
Length = 398
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/68 (85%), Positives = 63/68 (92%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ C+VCGEPAAGFHFGAFTCEGCKSFFGR+YNNL SISECKN C+INKKNRT+CK+
Sbjct: 54 MNQLCRVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLGSISECKNGGVCVINKKNRTACKA 113
Query: 61 CRLRKCLM 68
CRLRKCLM
Sbjct: 114 CRLRKCLM 121
>gi|350408787|ref|XP_003488514.1| PREDICTED: hypothetical protein LOC100741856 [Bombus impatiens]
Length = 400
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/68 (85%), Positives = 63/68 (92%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ C+VCGEPAAGFHFGAFTCEGCKSFFGR+YNNL SISECKN C+INKKNRT+CK+
Sbjct: 54 MNQLCRVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLGSISECKNGGVCVINKKNRTACKA 113
Query: 61 CRLRKCLM 68
CRLRKCLM
Sbjct: 114 CRLRKCLM 121
>gi|328777164|ref|XP_001120531.2| PREDICTED: hypothetical protein LOC724640 [Apis mellifera]
Length = 399
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/68 (85%), Positives = 63/68 (92%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ C+VCGEPAAGFHFGAFTCEGCKSFFGR+YNNL SISECKN C+INKKNRT+CK+
Sbjct: 52 MNQLCRVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLGSISECKNGGVCVINKKNRTACKA 111
Query: 61 CRLRKCLM 68
CRLRKCLM
Sbjct: 112 CRLRKCLM 119
>gi|380028877|ref|XP_003698111.1| PREDICTED: uncharacterized protein LOC100868182 [Apis florea]
Length = 398
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/68 (85%), Positives = 63/68 (92%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ C+VCGEPAAGFHFGAFTCEGCKSFFGR+YNNL SISECKN C+INKKNRT+CK+
Sbjct: 52 MNQLCRVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLGSISECKNGGVCVINKKNRTACKA 111
Query: 61 CRLRKCLM 68
CRLRKCLM
Sbjct: 112 CRLRKCLM 119
>gi|375065908|gb|AFA28435.1| MIP33571p1 [Drosophila melanogaster]
Length = 396
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 56/70 (80%), Positives = 67/70 (95%)
Query: 26 KSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGSRYGRRSNWF 85
+SFFGR+YNN+ +I+ CK+N +C+INKKNRT+CK+CRLRKCL+VGMSKSGSRYGRRSNWF
Sbjct: 49 QSFFGRTYNNIAAIAGCKHNGDCVINKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWF 108
Query: 86 KIHCLLQEQQ 95
KIHCLLQEQQ
Sbjct: 109 KIHCLLQEQQ 118
>gi|442634068|ref|NP_001262193.1| eagle, isoform C [Drosophila melanogaster]
gi|440216169|gb|AGB94886.1| eagle, isoform C [Drosophila melanogaster]
Length = 355
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 56/70 (80%), Positives = 67/70 (95%)
Query: 26 KSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGSRYGRRSNWF 85
+SFFGR+YNN+ +I+ CK+N +C+INKKNRT+CK+CRLRKCL+VGMSKSGSRYGRRSNWF
Sbjct: 8 QSFFGRTYNNIAAIAGCKHNGDCVINKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWF 67
Query: 86 KIHCLLQEQQ 95
KIHCLLQEQQ
Sbjct: 68 KIHCLLQEQQ 77
>gi|170057318|ref|XP_001864431.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876753|gb|EDS40136.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 440
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 59/65 (90%), Positives = 62/65 (95%)
Query: 27 SFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGSRYGRRSNWFK 86
SFFGRSYNNL SISECKNN EC+INKKNRT+CK+CRLRKCL VGMSKSGSRYGRRSNWFK
Sbjct: 12 SFFGRSYNNLSSISECKNNGECVINKKNRTACKACRLRKCLYVGMSKSGSRYGRRSNWFK 71
Query: 87 IHCLL 91
IHCLL
Sbjct: 72 IHCLL 76
>gi|380023742|ref|XP_003695671.1| PREDICTED: knirps-related protein-like [Apis florea]
Length = 491
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/65 (89%), Positives = 62/65 (95%)
Query: 27 SFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGSRYGRRSNWFK 86
SFFGRSYNNL SISECKN EC+INKKNRT+CK+CRLRKCL+VGMSKSGSRYGRRSNWFK
Sbjct: 105 SFFGRSYNNLSSISECKNGGECVINKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFK 164
Query: 87 IHCLL 91
IHCLL
Sbjct: 165 IHCLL 169
>gi|307171694|gb|EFN63429.1| Protein embryonic gonad [Camponotus floridanus]
Length = 339
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 66/80 (82%), Gaps = 1/80 (1%)
Query: 26 KSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGSRYGRRSNWF 85
+SFFGR+YNNL S+S CKN C INKKNRTSCK+CRLRKCL+ GMSKSGSRYGRRSN F
Sbjct: 35 QSFFGRTYNNLSSVSSCKNGGNCEINKKNRTSCKACRLRKCLLAGMSKSGSRYGRRSNSF 94
Query: 86 KIHCLLQEQQQQAEQQTERT 105
K LQEQ+++ ++ ++R+
Sbjct: 95 KESYALQEQEEE-DKSSDRS 113
>gi|157136332|ref|XP_001663708.1| hypothetical protein AaeL_AAEL013518 [Aedes aegypti]
gi|108870000|gb|EAT34225.1| AAEL013518-PA [Aedes aegypti]
Length = 295
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/66 (80%), Positives = 58/66 (87%), Gaps = 5/66 (7%)
Query: 27 SFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGSRYGRRSNWFK 86
SFFGR+YNNL SISECKNN EC+INKKNRT+CK+CRLRKCL+VGMSKSGSRYGRRSN
Sbjct: 31 SFFGRTYNNLSSISECKNNGECVINKKNRTACKACRLRKCLVVGMSKSGSRYGRRSN--- 87
Query: 87 IHCLLQ 92
CLL
Sbjct: 88 --CLLP 91
>gi|358340616|dbj|GAA48469.1| protein embryonic gonad [Clonorchis sinensis]
Length = 691
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 51/92 (55%), Positives = 64/92 (69%), Gaps = 3/92 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSIS-ECKNNNECIINKKNRTSCKSCRL 63
C+VCG P++GFHFGA TCEGCK FF R+ L ++ EC +NN+C I NR CKSCR
Sbjct: 173 CRVCGGPSSGFHFGALTCEGCKGFFRRTV--LSNVRLECLSNNDCPITPANRNMCKSCRF 230
Query: 64 RKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
++CL VGMSKSGSR GR+ N K +C + Q
Sbjct: 231 QRCLAVGMSKSGSRIGRQPNAIKYYCAREISQ 262
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 42/82 (51%), Gaps = 12/82 (14%)
Query: 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSY-----------NNLPSISECKNNNECII 50
+Q C++CG+PA GFH A+ CE CK FF R NL S S C +C +
Sbjct: 76 DQACQICGQPAVGFHHRAYVCEACKKFFMRHTAARYRHAEAGGGNL-SDSACPMGGQCRV 134
Query: 51 NKKNRTSCKSCRLRKCLMVGMS 72
R C CR RKCL +GM+
Sbjct: 135 EGPGRGKCPHCRYRKCLDLGMT 156
>gi|39653635|gb|AAR29356.1| two-DBD-nuclear receptor [Schistosoma mansoni]
Length = 1527
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 63/97 (64%)
Query: 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSC 61
N C+VCG ++GFHFGA TCEGCK FF R+ + S+ N C I ++R +CKSC
Sbjct: 564 NIPCRVCGGRSSGFHFGALTCEGCKGFFRRTEGSSNSLVCVGGQNACTITPRSRNACKSC 623
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQA 98
R R+CL GMSK GSR GR+ N K HC ++ +Q QA
Sbjct: 624 RFRRCLAAGMSKKGSRIGRQPNAVKFHCAIEIKQLQA 660
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGR-SYNNLPSISECKNNNECIINKKNRTSCKSC 61
Q C+VCGE AAGFH GA+ CE CK FF R S + + C CI+ K +R C+ C
Sbjct: 480 QKCQVCGELAAGFHHGAYVCEACKKFFMRHSMADTKPTNVCPTGGNCIVAKGSRGKCQIC 539
Query: 62 RLRKCLMVGM 71
R RKCL+VGM
Sbjct: 540 RYRKCLLVGM 549
>gi|256073528|ref|XP_002573082.1| nuclear hormone receptor [Schistosoma mansoni]
gi|353228471|emb|CCD74642.1| putative nuclear hormone receptor [Schistosoma mansoni]
Length = 1527
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 63/97 (64%)
Query: 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSC 61
N C+VCG ++GFHFGA TCEGCK FF R+ + S+ N C I ++R +CKSC
Sbjct: 564 NIPCRVCGGRSSGFHFGALTCEGCKGFFRRTEGSSNSLVCVGGQNACTITPRSRNACKSC 623
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQA 98
R R+CL GMSK GSR GR+ N K HC ++ +Q QA
Sbjct: 624 RFRRCLAAGMSKKGSRIGRQPNAVKFHCAIEIKQLQA 660
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGR-SYNNLPSISECKNNNECIINKKNRTSCKSC 61
Q C+VCGE AAGFH GA+ CE CK FF R S + + C CI+ K +R C+ C
Sbjct: 480 QKCQVCGELAAGFHHGAYVCEACKKFFMRHSMADTKPTNVCPTGGNCIVAKGSRGKCQIC 539
Query: 62 RLRKCLMVGM 71
R RKCL+VGM
Sbjct: 540 RYRKCLLVGM 549
>gi|39984732|gb|AAR32910.1| two-DBD-nuclear receptor [Schistosoma mansoni]
Length = 1527
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 63/97 (64%)
Query: 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSC 61
N C+VCG ++GFHFGA TCEGCK FF R+ + S+ N C I ++R +CKSC
Sbjct: 564 NIPCRVCGGRSSGFHFGALTCEGCKGFFRRTEGSSNSLVCVGGQNACTITPRSRNACKSC 623
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQA 98
R R+CL GMSK GSR GR+ N K HC ++ +Q QA
Sbjct: 624 RFRRCLAAGMSKKGSRIGRQPNAVKFHCAIEIKQLQA 660
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGR-SYNNLPSISECKNNNECIINKKNRTSCKSC 61
Q C+VCGE AAGFH GA+ CE CK FF R S + + C CI+ K +R C+ C
Sbjct: 480 QKCQVCGELAAGFHHGAYVCEACKKFFMRHSMADTKPTNVCPTGGNCIVAKGSRGKCQIC 539
Query: 62 RLRKCLMVGM 71
R RKCL+VGM
Sbjct: 540 RYRKCLLVGM 549
>gi|332031567|gb|EGI71039.1| Knirps-related protein [Acromyrmex echinatior]
Length = 428
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/62 (74%), Positives = 54/62 (87%)
Query: 26 KSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGSRYGRRSNWF 85
KSFFGR+YNN +++ CKN CIINK+NRT+CK+CRL+KCL VGMSKS SRYGRRSNWF
Sbjct: 39 KSFFGRTYNNPTNVTACKNGGNCIINKRNRTACKACRLKKCLDVGMSKSSSRYGRRSNWF 98
Query: 86 KI 87
KI
Sbjct: 99 KI 100
>gi|88595434|gb|AAW88534.2| nuclear receptor 2DBD-beta [Schistosoma mansoni]
Length = 1523
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSIS-ECKNNNECIINKKNRTSCKSCRL 63
C+VC P++GFHFGA TCEGCK FF R+ L ++ EC NN+C I NR CKSCR
Sbjct: 174 CRVCSGPSSGFHFGALTCEGCKGFFRRTV--LSNVRLECPGNNDCPITPANRNMCKSCRF 231
Query: 64 RKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHP 110
++CL VGMSK+GSR GR+ N K +C + Q E T +P
Sbjct: 232 QRCLAVGMSKTGSRIGRQPNTIKYYCAREISQLTNSNDCEATTTMNP 278
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGR---------SYNNLPSISECKNNNECIINK 52
+Q C++CG+PA GFH A+ CE CK FF R + S S C C +
Sbjct: 78 DQACQICGQPAVGFHHRAYVCEACKKFFMRHTAARLRNSEIGSTVSESICPMGGRCRVEG 137
Query: 53 KNRTSCKSCRLRKCLMVGMS 72
R C CR RKCL +GM+
Sbjct: 138 PGRGKCPHCRYRKCLELGMT 157
>gi|312087282|ref|XP_003145410.1| hypothetical protein LOAG_09835 [Loa loa]
gi|307759426|gb|EFO18660.1| hypothetical protein LOAG_09835 [Loa loa]
Length = 209
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 68/108 (62%), Gaps = 16/108 (14%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS-----------YNNLPSISE-----CKNNNEC 48
C+VC E A G+HFGAFTCEGCKSFFGR+ N+ +S CKN +C
Sbjct: 26 CQVCNELARGYHFGAFTCEGCKSFFGRTCKPSKGTTADGSNDSKMLSTKMKLFCKNGGKC 85
Query: 49 IINKKNRTSCKSCRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQ 96
+ +NRTSCK CR KC+ VGM+ SRYGRRS +FK+ LL+ Q++
Sbjct: 86 NVQGRNRTSCKLCRFNKCIEVGMAPQNSRYGRRSKYFKVSSLLKAQER 133
>gi|358331616|dbj|GAA50395.1| peroxisome proliferator-activated receptor gamma [Clonorchis
sinensis]
Length = 910
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 46/92 (50%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSIS-ECKNNNECIINKKNRTSCKSCRL 63
C+VCG ++GFHFGA TCEGCK FF R+ N S C+N C + R +CKSCR
Sbjct: 58 CRVCGAKSSGFHFGAITCEGCKGFFRRTINERESQRYTCRNGGNCAVTGATRNNCKSCRY 117
Query: 64 RKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
R+C+ VGMSK GSR GR+ N K C ++ +Q
Sbjct: 118 RRCVAVGMSKDGSRIGRQPNAVKHRCAIEIEQ 149
>gi|322802301|gb|EFZ22697.1| hypothetical protein SINV_09414 [Solenopsis invicta]
Length = 400
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 53/62 (85%)
Query: 26 KSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGSRYGRRSNWF 85
+SFFGR+YNN +++ CKN C INK+NRT+CK+CRL+KCL VGMSKS SRYGRRSNWF
Sbjct: 15 QSFFGRTYNNPTNVTACKNGGNCTINKRNRTACKACRLKKCLEVGMSKSSSRYGRRSNWF 74
Query: 86 KI 87
KI
Sbjct: 75 KI 76
>gi|115728480|ref|XP_001193835.1| PREDICTED: uncharacterized protein LOC756187 [Strongylocentrotus
purpuratus]
Length = 742
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 61/87 (70%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MN C+VCG+ A+GFH+G +CEGCK FF R+ + + C N +C+I +KNR C+S
Sbjct: 48 MNILCQVCGDKASGFHYGVHSCEGCKGFFRRTVQHNLTYRPCPNGGKCVIQRKNRNQCQS 107
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKI 87
CRLRKC+++GMSK+ R+GR S K+
Sbjct: 108 CRLRKCILMGMSKNAVRFGRMSKREKM 134
>gi|390334919|ref|XP_003724040.1| PREDICTED: uncharacterized protein LOC100890792 [Strongylocentrotus
purpuratus]
Length = 917
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/111 (45%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Query: 7 VCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKC 66
VCG+ + GFH+G +CEGCK FF RS N S + C NN +C I+ R C+ CR +KC
Sbjct: 2 VCGDTSTGFHYGIHSCEGCKGFFRRSLNQHESYT-CSNNGQCEISLYTRNQCQLCRWKKC 60
Query: 67 LMVGMSKSGSRYGRRSNWF--KIHCLLQEQQQQAEQQTERTKL--GHPDLL 113
L VGMSK GSR GRRS K+H + +Q+ Q + + HPDL
Sbjct: 61 LGVGMSKDGSRLGRRSKRMIEKMHETIAKQRNQGDMTVKPAGFYSNHPDLF 111
>gi|353228881|emb|CCD75052.1| putative nuclear receptor [Schistosoma mansoni]
Length = 1817
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSIS-ECKNNNECIINKKNRTSCKSCRL 63
C+VCG ++GFHFGA TCEGCK FF R+ N S C+N C + R +CKSCR
Sbjct: 479 CRVCGAKSSGFHFGAITCEGCKGFFRRTINERESQRYTCRNGGNCAVTGATRNNCKSCRY 538
Query: 64 RKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
R+CL VGMSK GSR GR+ N K C ++ +Q
Sbjct: 539 RRCLAVGMSKHGSRIGRQPNAIKHRCAVEIEQ 570
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSY--NNLPSISECKNNNECIINKKNRTSCKSCR 62
C +CG+ AAGFH A+ CE CK FF RS N + C +N C INK RT C+ CR
Sbjct: 394 CDICGDVAAGFHCNAYVCEACKKFFIRSSKGENFTKYT-CTKSNTCEINKDTRTHCQRCR 452
Query: 63 LRKCLMVGMSKSGSRYGRRSNWFKIHC 89
+KC+ +GM G+ ++ +I C
Sbjct: 453 YQKCIRLGMVLPGAAVFPVTDISEIPC 479
>gi|256092818|ref|XP_002582074.1| nuclear receptor 2DBD-gamma [Schistosoma mansoni]
Length = 1841
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSIS-ECKNNNECIINKKNRTSCKSCRL 63
C+VCG ++GFHFGA TCEGCK FF R+ N S C+N C + R +CKSCR
Sbjct: 479 CRVCGAKSSGFHFGAITCEGCKGFFRRTINERESQRYTCRNGGNCAVTGATRNNCKSCRY 538
Query: 64 RKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
R+CL VGMSK GSR GR+ N K C ++ +Q
Sbjct: 539 RRCLAVGMSKHGSRIGRQPNAIKHRCAVEIEQ 570
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSY--NNLPSISECKNNNECIINKKNRTSCKSCR 62
C +CG+ AAGFH A+ CE CK FF RS N + C +N C INK RT C+ CR
Sbjct: 394 CDICGDVAAGFHCNAYVCEACKKFFIRSSKGENFTKYT-CTKSNTCEINKDTRTHCQRCR 452
Query: 63 LRKCLMVGMSKSGSRYGRRSNWFKIHC 89
+KC+ +GM G+ ++ +I C
Sbjct: 453 YQKCIRLGMVLPGAAVFPVTDISEIPC 479
>gi|193201685|gb|ACF16007.1| estrogen receptor [Branchiostoma floridae]
Length = 705
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/77 (51%), Positives = 54/77 (70%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G ++CEGCK+FF RS + C N+C I++ R SC++CR R
Sbjct: 297 CRVCGDHASGFHYGVWSCEGCKAFFKRSIQQGQTDYICPGTNQCTIDRNRRKSCQACRYR 356
Query: 65 KCLMVGMSKSGSRYGRR 81
KCLMVGM+K G R G R
Sbjct: 357 KCLMVGMTKDGRRSGER 373
>gi|6015044|sp|O01639.1|E75_CHOFU RecName: Full=Ecdysone-inducible protein E75; AltName: Full=Nuclear
receptor subfamily 1 group D member 3
gi|1945355|gb|AAB52717.1| hormone receptor 75 [Choristoneura fumiferana]
Length = 690
Score = 96.7 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/107 (40%), Positives = 58/107 (54%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 47 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 106
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPD 111
KC+ VGMS+ R+GR K L QQ + + E+ D
Sbjct: 107 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELD 153
>gi|170178461|gb|ACB10650.1| estrogen receptor [Branchiostoma floridae]
Length = 521
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 4 TCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRL 63
C+VCG+ A+GFH+G ++CEGCK+FF RS + C N+C I++ R SC++CR
Sbjct: 112 VCRVCGDHASGFHYGVWSCEGCKAFFKRSIQQGQTDYICPGTNQCTIDRNRRKSCQACRY 171
Query: 64 RKCLMVGMSKSGSRYGRR 81
RKCLMVGM+K G R G R
Sbjct: 172 RKCLMVGMTKDGRRSGER 189
>gi|146742358|gb|ABQ42696.1| estrogen receptor [Branchiostoma floridae]
Length = 491
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 4 TCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRL 63
C+VCG+ A+GFH+G ++CEGCK+FF RS + C N+C I++ R SC++CR
Sbjct: 82 VCRVCGDHASGFHYGVWSCEGCKAFFKRSIQQGQTDYICPGTNQCTIDRNRRKSCQACRY 141
Query: 64 RKCLMVGMSKSGSRYGRR 81
RKCLMVGM+K G R G R
Sbjct: 142 RKCLMVGMTKDGRRSGER 159
>gi|195441651|ref|XP_002068617.1| GK20573 [Drosophila willistoni]
gi|194164702|gb|EDW79603.1| GK20573 [Drosophila willistoni]
Length = 930
Score = 96.3 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 338 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 397
Query: 65 KCLMVGMSKSGSRYGR---RSNWFKIHCLLQEQQQQAEQQTERTKL-GHPDLL 113
KC+ VGMS+ R+GR R + + Q Q + +Q+ T+L P LL
Sbjct: 398 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPRLL 450
>gi|112983128|ref|NP_001037042.1| nuclear hormone receptor E75 isoform C [Bombyx mori]
gi|18033301|gb|AAL57048.1|AF332551_1 orphan nuclear receptor E75C [Bombyx mori]
Length = 753
Score = 95.9 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 43/107 (40%), Positives = 58/107 (54%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 99 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 158
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPD 111
KC+ VGMS+ R+GR K L QQ + + E+ D
Sbjct: 159 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELD 205
>gi|18033299|gb|AAL57047.1|AF332550_1 orphan nuclear receptor E75A [Bombyx mori]
Length = 697
Score = 95.9 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 43/107 (40%), Positives = 58/107 (54%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 43 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 102
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPD 111
KC+ VGMS+ R+GR K L QQ + + E+ D
Sbjct: 103 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELD 149
>gi|162951899|ref|NP_001106079.1| nuclear hormone receptor E75 isoform A [Bombyx mori]
gi|6683592|dbj|BAA89262.1| nuclear hormone receptor E75 A [Bombyx mori]
Length = 697
Score = 95.9 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 43/107 (40%), Positives = 58/107 (54%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 43 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 102
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPD 111
KC+ VGMS+ R+GR K L QQ + + E+ D
Sbjct: 103 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELD 149
>gi|449491752|ref|XP_002191570.2| PREDICTED: nuclear receptor ROR-beta-like [Taeniopygia guttata]
Length = 461
Score = 95.9 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 43/98 (43%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 106 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CSRQRNCLIDRTNRNRCQHCRLQ 164
Query: 65 KCLMVGMSKSGSRYGRRSNWFK--IHCLLQEQQQQAEQ 100
KCL +GMS+ ++GR S + ++ +Q+ QQ EQ
Sbjct: 165 KCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQEQ 202
>gi|1706557|sp|P50239.1|E75_GALME RecName: Full=Ecdysone-inducible protein E75; AltName: Full=Nuclear
receptor subfamily 1 group D member 3
gi|508205|gb|AAA19579.1| E75 [Galleria mellonella]
Length = 711
Score = 95.9 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 45/115 (39%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 47 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 106
Query: 65 KCLMVGMSKSGSRYGR--RSNWFKIHCLLQEQQQQAEQQTERTKLGH-PDLLLKL 116
KC+ VGMS+ R+GR + +I +Q +A +Q +L P LL ++
Sbjct: 107 KCIAVGMSRDAVRFGRVPKREKARILAAMQSSTTRAHEQAAAAELDDGPRLLARV 161
>gi|21166368|gb|AAL57049.2|AF332552_1 orphan nuclear receptor E75C splicing variant [Bombyx mori]
Length = 662
Score = 95.9 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 43/107 (40%), Positives = 58/107 (54%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 8 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 67
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPD 111
KC+ VGMS+ R+GR K L QQ + + E+ D
Sbjct: 68 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELD 114
>gi|6166165|sp|Q08893.2|E75_MANSE RecName: Full=Ecdysone-inducible protein E75; AltName: Full=Nuclear
receptor subfamily 1 group D member 3
Length = 699
Score = 95.5 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 43/107 (40%), Positives = 57/107 (53%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 45 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 104
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPD 111
KC+ VGMS+ R+GR K L QQ + E+ D
Sbjct: 105 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSSTSRAHEQAAAAELD 151
>gi|281485485|dbj|BAI59767.1| estrogen receptor [Branchiostoma belcheri]
Length = 694
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 4 TCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRL 63
C+VCG+ A+GFH+G ++CEGCK+FF RS + C N+C I++ R SC++CR
Sbjct: 285 VCRVCGDHASGFHYGVWSCEGCKAFFKRSIQQGQTDYICPGTNQCTIDRNRRKSCQACRY 344
Query: 64 RKCLMVGMSKSGSRYGRR 81
RKCLMVGM+K G R G R
Sbjct: 345 RKCLMVGMTKDGRRNGER 362
>gi|195591221|ref|XP_002085341.1| GD12358 [Drosophila simulans]
gi|194197350|gb|EDX10926.1| GD12358 [Drosophila simulans]
Length = 433
Score = 94.7 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 245 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 304
Query: 65 KCLMVGMSKSGSRYGR---RSNWFKIHCLLQEQQQQAEQQTERTKL-GHPDLL 113
KC+ VGMS+ R+GR R + + Q Q + +Q+ T+L P LL
Sbjct: 305 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPRLL 357
>gi|24666198|ref|NP_730321.1| Ecdysone-induced protein 75B, isoform B [Drosophila melanogaster]
gi|386771372|ref|NP_001246821.1| Ecdysone-induced protein 75B, isoform E [Drosophila melanogaster]
gi|386771374|ref|NP_001246822.1| Ecdysone-induced protein 75B, isoform F [Drosophila melanogaster]
gi|71153513|sp|P13055.2|E75BB_DROME RecName: Full=Ecdysone-induced protein 75B, isoform B; AltName:
Full=E75-C; AltName: Full=Nuclear receptor subfamily 1
group D member 3, isoform B
gi|23093216|gb|AAF49282.3| Ecdysone-induced protein 75B, isoform B [Drosophila melanogaster]
gi|383291995|gb|AFH04492.1| Ecdysone-induced protein 75B, isoform E [Drosophila melanogaster]
gi|383291996|gb|AFH04493.1| Ecdysone-induced protein 75B, isoform F [Drosophila melanogaster]
Length = 1412
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 458 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 517
Query: 65 KCLMVGMSKSGSRYGR---RSNWFKIHCLLQEQQQQAEQQTERTKL-GHPDLL 113
KC+ VGMS+ R+GR R + + Q Q + +Q+ T+L P LL
Sbjct: 518 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPRLL 570
>gi|24666202|ref|NP_730322.1| Ecdysone-induced protein 75B, isoform C [Drosophila melanogaster]
gi|71153514|sp|P17671.2|E75BC_DROME RecName: Full=Ecdysone-induced protein 75B, isoforms C/D; AltName:
Full=E75-A; AltName: Full=Nuclear receptor subfamily 1
group D member 3, isoforms C/D
gi|23093217|gb|AAN11687.1| Ecdysone-induced protein 75B, isoform C [Drosophila melanogaster]
Length = 1199
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 245 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 304
Query: 65 KCLMVGMSKSGSRYGR---RSNWFKIHCLLQEQQQQAEQQTERTKL-GHPDLL 113
KC+ VGMS+ R+GR R + + Q Q + +Q+ T+L P LL
Sbjct: 305 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPRLL 357
>gi|268559752|ref|XP_002646063.1| C. briggsae CBR-NHR-85 protein [Caenorhabditis briggsae]
Length = 524
Score = 94.4 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/108 (37%), Positives = 61/108 (56%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VC + A+GFH+G F CEGCK FF RS + C +C+I + NR C+ CRL+
Sbjct: 117 CQVCSDKASGFHYGVFACEGCKGFFRRSIQQKLTYRACTRVEDCLILRNNRNRCQCCRLK 176
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
KCL VGMS+ R+GR K + Q+ + Q ++ + + +L
Sbjct: 177 KCLAVGMSRDAVRFGRVPKREKARMFEEMQKTNVQSQKDQIAIQYENL 224
>gi|189182188|gb|ACD81870.1| RE08859p [Drosophila melanogaster]
Length = 1199
Score = 94.4 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 245 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 304
Query: 65 KCLMVGMSKSGSRYGR---RSNWFKIHCLLQEQQQQAEQQTERTKL-GHPDLL 113
KC+ VGMS+ R+GR R + + Q Q + +Q+ T+L P LL
Sbjct: 305 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPRLL 357
>gi|91680596|emb|CAJ87513.1| ecdysone inducible protein 75 isoform A [Blattella germanica]
Length = 954
Score = 94.4 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 56/100 (56%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 52 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 111
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
KC+ VGMS+ R+GR K L QQ + E+
Sbjct: 112 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSSNSRSQEK 151
>gi|332025807|gb|EGI65964.1| Ecdysone-inducible protein E75 [Acromyrmex echinatior]
Length = 891
Score = 94.4 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 56/100 (56%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 89 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 148
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
KC+ VGMS+ R+GR K L QQ + E+
Sbjct: 149 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSSHSRSQEK 188
>gi|187468482|emb|CAM97373.1| ecdysone inducible protein 75 [Blattella germanica]
Length = 985
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 56/100 (56%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 83 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 142
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
KC+ VGMS+ R+GR K L QQ + E+
Sbjct: 143 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSSNSRSQEK 182
>gi|293329643|dbj|BAJ04337.1| estrogen receptor 1 [Glandirana rugosa]
Length = 585
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 180 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 238
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+++ EQ+TE
Sbjct: 239 KCYEVGMMKGGIRKDRRGGRMMKH---KRQKEEQEQKTE 274
>gi|7911|emb|CAA35923.1| unnamed protein product [Drosophila melanogaster]
Length = 1237
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 245 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 304
Query: 65 KCLMVGMSKSGSRYGR---RSNWFKIHCLLQEQQQQAEQQTERTKL-GHPDLL 113
KC+ VGMS+ R+GR R + + Q Q + +Q+ T+L P LL
Sbjct: 305 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPRLL 357
>gi|187468486|emb|CAM97375.1| ecdysone inducible protein 75 [Blattella germanica]
Length = 945
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 56/100 (56%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 43 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 102
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
KC+ VGMS+ R+GR K L QQ + E+
Sbjct: 103 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSSNSRSQEK 142
>gi|307199135|gb|EFN79845.1| Nuclear hormone receptor E75 [Harpegnathos saltator]
Length = 929
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 56/100 (56%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 46 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 105
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
KC+ VGMS+ R+GR K L QQ + E+
Sbjct: 106 KCIAVGMSRDAVRFGRVPKREKARILAAMQQTPPSRSQEK 145
>gi|340721154|ref|XP_003398990.1| PREDICTED: ecdysone-induced protein 75B, isoforms C/D-like isoform
1 [Bombus terrestris]
Length = 895
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 56/100 (56%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 90 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 149
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
KC+ VGMS+ R+GR K L QQ + E+
Sbjct: 150 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSSHSRSQEK 189
>gi|157115978|ref|XP_001652743.1| ecdysone-induced protein 75b [Aedes aegypti]
Length = 1045
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 56/100 (56%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 199 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 258
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
KC+ VGMS+ R+GR K L QQ + +R
Sbjct: 259 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSTQNRGNQR 298
>gi|113431926|emb|CAL36974.1| ecdysone-induced protein 75A [Aedes aegypti]
gi|403182870|gb|EAT40908.2| AAEL007397-PA [Aedes aegypti]
Length = 1069
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 56/100 (56%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 199 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 258
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
KC+ VGMS+ R+GR K L QQ + +R
Sbjct: 259 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSTQNRGNQR 298
>gi|340721156|ref|XP_003398991.1| PREDICTED: ecdysone-induced protein 75B, isoforms C/D-like isoform
2 [Bombus terrestris]
gi|350399401|ref|XP_003485512.1| PREDICTED: ecdysone-induced protein 75B, isoform B-like [Bombus
impatiens]
Length = 872
Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 56/100 (56%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 67 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 126
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
KC+ VGMS+ R+GR K L QQ + E+
Sbjct: 127 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSSHSRSQEK 166
>gi|194270637|gb|ACF36863.1| nuclear receptor E75 protein [Fenneropenaeus chinensis]
Length = 798
Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/103 (43%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 32 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 91
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKL 107
KC+ VGMS+ R+GR K L Q A Q ER L
Sbjct: 92 KCIAVGMSRDAVRFGRVPKREKAKILAAMQSVNARSQ-ERAVL 133
>gi|427783373|gb|JAA57138.1| Putative ecdysone-induced protein 75b [Rhipicephalus pulchellus]
Length = 624
Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/97 (43%), Positives = 55/97 (56%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 39 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 98
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQ 101
KC+ VGMS+ R+GR K L Q+ A Q
Sbjct: 99 KCIAVGMSRDAVRFGRVPKREKAKILAAMQKVNASSQ 135
>gi|405968018|gb|EKC33126.1| ATP-dependent RNA helicase DDX51 [Crassostrea gigas]
Length = 1179
Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G +CEGCK FF RS C + +C++ + +R C+ CR +
Sbjct: 816 CKVCGDRASGFHYGVTSCEGCKGFFRRSIQKQIEY-RCLRDGKCMVIRLSRNRCQYCRFK 874
Query: 65 KCLMVGMSKSGSRYGR---RSNWFKIHCLLQEQQQQAEQQTERTKLGHPDLLLKLDKFTN 121
KCL VGMS+ RYGR RS C+ + E +L D++L + + +
Sbjct: 875 KCLAVGMSRDSVRYGRVPKRSKSQDDSCVSSTDSNMDQSALENKQLAIYDIILNISQAHH 934
Query: 122 NNTIVTNNNL 131
N +VT + +
Sbjct: 935 TNCLVTEDRI 944
>gi|189240947|ref|XP_971362.2| PREDICTED: similar to ecdysone inducible protein 75 [Tribolium
castaneum]
Length = 771
Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 56/100 (56%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 40 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 99
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
KC+ VGMS+ R+GR K L QQ + E+
Sbjct: 100 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSSNSRSLEK 139
>gi|391327316|ref|XP_003738149.1| PREDICTED: nuclear hormone receptor E75-like [Metaseiulus
occidentalis]
Length = 667
Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 57/100 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 60 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCAILRINRNRCQYCRLK 119
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
KC+ VGMS+ R+GR K L Q+ A Q ++
Sbjct: 120 KCIGVGMSRDAVRFGRVPKREKAKILAAMQKVNASSQEKQ 159
>gi|113431930|emb|CAL36975.1| ecdysone-induced protein 75C [Aedes aegypti]
Length = 1134
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 56/100 (56%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 264 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 323
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
KC+ VGMS+ R+GR K L QQ + +R
Sbjct: 324 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSTQNRGNQR 363
>gi|121582432|ref|NP_001073579.1| ecdysone-induced protein 75 [Apis mellifera]
gi|121308432|dbj|BAF43600.1| ecdysone-induced protein 75 [Apis mellifera]
Length = 900
Score = 93.2 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 56/100 (56%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 67 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 126
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
KC+ VGMS+ R+GR K L QQ + E+
Sbjct: 127 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSSHSRSQEK 166
>gi|383847771|ref|XP_003699526.1| PREDICTED: ecdysone-inducible protein E75-like [Megachile
rotundata]
Length = 782
Score = 93.2 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 56/100 (56%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 66 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 125
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
KC+ VGMS+ R+GR K L QQ + E+
Sbjct: 126 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSSHSRSQEK 165
>gi|410932233|ref|XP_003979498.1| PREDICTED: nuclear receptor ROR-beta-like, partial [Takifugu
rubripes]
Length = 267
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 74/129 (57%), Gaps = 2/129 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 14 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 72
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER-TKLGHPDLLLKLDKFTNNN 123
KCL +GMS+ ++GR S + + Q+ QA Q +R + G + L ++ + N
Sbjct: 73 KCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQARLQEQRQQQTGEAEALARVYSSSLTN 132
Query: 124 TIVTNNNLI 132
+ T N+ I
Sbjct: 133 GLSTLNHEI 141
>gi|220942181|gb|AAY89587.2| E75 nuclear receptor [Gecarcinus lateralis]
Length = 798
Score = 93.2 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/104 (43%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 32 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 91
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLG 108
KC+ VGMS+ R+GR K L Q A Q ER L
Sbjct: 92 KCIAVGMSRDAVRFGRVPKREKAKILAAMQSVNARSQ-ERAVLA 134
>gi|241106442|ref|XP_002410049.1| nuclear receptor, putative [Ixodes scapularis]
gi|215492869|gb|EEC02510.1| nuclear receptor, putative [Ixodes scapularis]
Length = 498
Score = 93.2 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/97 (43%), Positives = 55/97 (56%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 39 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 98
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQ 101
KC+ VGMS+ R+GR K L Q+ A Q
Sbjct: 99 KCIAVGMSRDAVRFGRVPKREKAKILAAMQKVNASSQ 135
>gi|432874724|ref|XP_004072561.1| PREDICTED: nuclear receptor ROR-beta-like [Oryzias latipes]
Length = 472
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 74/129 (57%), Gaps = 2/129 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER-TKLGHPDLLLKLDKFTNNN 123
KCL +GMS+ ++GR S + + Q+ QA Q +R + G + L ++ + N
Sbjct: 69 KCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQARLQEQRQQQTGEAEALARVYSTSLTN 128
Query: 124 TIVTNNNLI 132
+ T N+ I
Sbjct: 129 GLSTLNHEI 137
>gi|114049537|emb|CAJ90622.1| HR3 isoform B1 [Blattella germanica]
Length = 651
Score = 92.8 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N C++++ NR C+ CRL+
Sbjct: 82 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKNCVVDRVNRNRCQYCRLQ 140
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 141 KCLRLGMSRDAVKFGRMS 158
>gi|348516240|ref|XP_003445647.1| PREDICTED: nuclear receptor ROR-beta [Oreochromis niloticus]
Length = 481
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 74/129 (57%), Gaps = 2/129 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 19 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 77
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER-TKLGHPDLLLKLDKFTNNN 123
KCL +GMS+ ++GR S + + Q+ QA Q +R + G + L ++ + N
Sbjct: 78 KCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQARLQEQRQQQTGEAEALARVYSSSLTN 137
Query: 124 TIVTNNNLI 132
+ T N+ I
Sbjct: 138 GLSTLNHEI 146
>gi|114049535|emb|CAJ90621.1| HR3 isoform A [Blattella germanica]
Length = 607
Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N C++++ NR C+ CRL+
Sbjct: 38 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKNCVVDRVNRNRCQYCRLQ 96
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 97 KCLRLGMSRDAVKFGRMS 114
>gi|157123672|ref|XP_001660273.1| expressed protein (HR3) [Aedes aegypti]
gi|108874313|gb|EAT38538.1| AAEL009588-PA [Aedes aegypti]
Length = 468
Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N +C++++ NR C+ CRL+
Sbjct: 32 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKQCVVDRVNRNRCQYCRLQ 90
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 91 KCLKLGMSRDAVKFGRMS 108
>gi|425700840|gb|AFV36366.2| estrogen receptor beta 1 [Thamnaconus septentrionalis]
Length = 565
Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 45/106 (42%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS + C N+C I+K R SC+SCRLR
Sbjct: 160 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQTGQNDYICPATNQCTIDKNRRKSCQSCRLR 219
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHP 110
KC VGMSK G R R N+ + AE+ LG P
Sbjct: 220 KCYEVGMSKCGMR-KERGNYRNPQMRRATRLSSAERHGAPGSLGGP 264
>gi|7110506|gb|AAF36970.1|AF230281_1 nuclear receptor 3 [Aedes aegypti]
Length = 468
Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N +C++++ NR C+ CRL+
Sbjct: 32 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKQCVVDRVNRNRCQYCRLQ 90
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 91 KCLKLGMSRDAVKFGRMS 108
>gi|328699242|ref|XP_003240875.1| PREDICTED: probable nuclear hormone receptor HR3-like
[Acyrthosiphon pisum]
Length = 807
Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N C++++ NR C+ CRL+
Sbjct: 149 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKNCVVDRVNRNRCQYCRLQ 207
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 208 KCLRLGMSRDAVKFGRMS 225
>gi|114049539|emb|CAJ90623.1| HR3 isoform B2 [Blattella germanica]
Length = 566
Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N C++++ NR C+ CRL+
Sbjct: 82 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKNCVVDRVNRNRCQYCRLQ 140
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 141 KCLRLGMSRDAVKFGRMS 158
>gi|1708295|sp|P49868.1|HR3_GALME RecName: Full=Probable nuclear hormone receptor HR3; Short=gHR3;
AltName: Full=Nuclear receptor subfamily 1 group F
member 4
gi|409272|gb|AAA83401.1| GHR3 [Galleria mellonella]
Length = 557
Score = 92.4 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS + + + +C N C++++ NR C+ CRL+
Sbjct: 108 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACVVDRVNRNRCQYCRLQ 166
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 167 KCLKLGMSRDAVKFGRMS 184
>gi|320543744|ref|NP_788302.2| hormone receptor-like in 46, isoform E [Drosophila melanogaster]
gi|318068560|gb|AAO41454.2| hormone receptor-like in 46, isoform E [Drosophila melanogaster]
Length = 874
Score = 92.0 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N +C++++ NR C+ CRL+
Sbjct: 440 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKQCVVDRVNRNRCQYCRLQ 498
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 499 KCLKLGMSRDAVKFGRMS 516
>gi|161339211|gb|AAT08962.2| PHR3 [Plodia interpunctella]
Length = 539
Score = 92.0 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 63/102 (61%), Gaps = 10/102 (9%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS + + + +C N C++++ NR C+ CRL+
Sbjct: 104 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACVVDRVNRNRCQYCRLQ 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTK 106
KCL +GMS+ ++GR S ++Q+++ E + K
Sbjct: 163 KCLKLGMSRDAVKFGRMS---------KKQREKVEDEVRYHK 195
>gi|328704916|ref|XP_001946085.2| PREDICTED: ecdysone-induced protein 75B, isoforms C/D
[Acyrthosiphon pisum]
Length = 1026
Score = 92.0 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 41/104 (39%), Positives = 56/104 (53%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRLR
Sbjct: 196 CRVCGDRASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCNILRINRNRCQYCRLR 255
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLG 108
KC+ VGMS+ R+GR K + Q + E+ +
Sbjct: 256 KCISVGMSRDAVRFGRVPKREKARIMAAMQHSSNSKSQEKAAVA 299
>gi|158299692|ref|XP_319750.4| AGAP009002-PA [Anopheles gambiae str. PEST]
gi|157013639|gb|EAA14853.4| AGAP009002-PA [Anopheles gambiae str. PEST]
Length = 639
Score = 92.0 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N +C++++ NR C+ CRL+
Sbjct: 34 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKQCVVDRVNRNRCQYCRLQ 92
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 93 KCLKLGMSRDAVKFGRMS 110
>gi|260807677|ref|XP_002598635.1| hypothetical protein BRAFLDRAFT_67032 [Branchiostoma floridae]
gi|229283908|gb|EEN54647.1| hypothetical protein BRAFLDRAFT_67032 [Branchiostoma floridae]
Length = 566
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 59/103 (57%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M CKVCG+ A+GFH+G CEGCK FF RS +C N +C I + NR C+
Sbjct: 14 MMILCKVCGDKASGFHYGVHACEGCKGFFRRSIQQKIQYKQCTKNEKCSIMRVNRNRCQH 73
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
CRL+KCL VGMS+ R+GR K L + Q + + ++E
Sbjct: 74 CRLKKCLAVGMSRDAVRFGRVPKREKARLLAELQNLKNQTESE 116
>gi|198385545|gb|ACH86113.1| molt-regulating transcription factor HaHR3 [Helicoverpa armigera]
Length = 556
Score = 92.0 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS + + + +C N C++++ NR C+ CRL+
Sbjct: 107 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACVVDRVNRNRCQYCRLQ 165
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 166 KCLKLGMSRDAVKFGRMS 183
>gi|350419474|ref|XP_003492193.1| PREDICTED: probable nuclear hormone receptor HR3-like [Bombus
impatiens]
Length = 512
Score = 92.0 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N C++++ NR C+ CRL+
Sbjct: 61 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKNCVVDRVNRNRCQYCRLQ 119
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 120 KCLRLGMSRDAVKFGRMS 137
>gi|39938474|gb|AAK14384.2| molt-regulating transcription factor HHR3 [Helicoverpa armigera]
Length = 556
Score = 92.0 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS + + + +C N C++++ NR C+ CRL+
Sbjct: 107 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACVVDRVNRNRCQYCRLQ 165
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 166 KCLKLGMSRDAVKFGRMS 183
>gi|389610515|dbj|BAM18869.1| hormone receptor 3 [Papilio xuthus]
Length = 554
Score = 92.0 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS + + + +C N C++++ NR C+ CRL+
Sbjct: 105 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACVVDRVNRNRCQYCRLQ 163
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 164 KCLKLGMSRDAVKFGRMS 181
>gi|152148438|gb|ABS29716.1| nuclear receptor [Dirofilaria immitis]
Length = 653
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 53/86 (61%)
Query: 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSC 61
N C+VCG+ A+GFH+G F CEGCK FF RS C + +CI+ + NR C+ C
Sbjct: 166 NYLCQVCGDRASGFHYGVFACEGCKGFFRRSIQQKIQYRPCTKSQQCIVARNNRNRCQHC 225
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKI 87
RL+KC+ VGMS+ R+GR K+
Sbjct: 226 RLQKCIRVGMSREAVRFGRVPKHEKV 251
>gi|380028730|ref|XP_003698042.1| PREDICTED: probable nuclear hormone receptor HR3-like [Apis florea]
Length = 640
Score = 91.7 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N C++++ NR C+ CRL+
Sbjct: 61 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKNCVVDRVNRNRCQYCRLQ 119
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 120 KCLRLGMSRDAVKFGRMS 137
>gi|312068699|ref|XP_003137336.1| hypothetical protein LOAG_01750 [Loa loa]
gi|307767500|gb|EFO26734.1| hypothetical protein LOAG_01750 [Loa loa]
Length = 536
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 53/86 (61%)
Query: 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSC 61
N C+VCG+ A+GFH+G F CEGCK FF RS C + +C++ + NR C+ C
Sbjct: 46 NYLCQVCGDRASGFHYGVFACEGCKGFFRRSIQQKIQYRPCTRSQQCVVARNNRNRCQHC 105
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKI 87
RL+KC+ VGMS+ R+GR K+
Sbjct: 106 RLQKCIKVGMSREAVRFGRVPKHEKV 131
>gi|112983248|ref|NP_001037012.1| hormone receptor 3 [Bombyx mori]
gi|14484879|gb|AAK62804.1|AF073927_1 nuclear receptor HR3 isoform A [Bombyx mori]
Length = 490
Score = 91.7 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 63/102 (61%), Gaps = 10/102 (9%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS + + + +C N C++++ NR C+ CRL+
Sbjct: 42 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACVVDRVNRNRCQYCRLQ 100
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTK 106
KCL +GMS+ ++GR S ++Q+++ E + K
Sbjct: 101 KCLKLGMSRDAVKFGRMS---------KKQREKVEDEVRYHK 133
>gi|194858004|ref|XP_001969081.1| GG25225 [Drosophila erecta]
gi|190660948|gb|EDV58140.1| GG25225 [Drosophila erecta]
Length = 702
Score = 91.7 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N +C++++ NR C+ CRL+
Sbjct: 266 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKQCVVDRVNRNRCQYCRLQ 324
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 325 KCLKLGMSRDAVKFGRMS 342
>gi|152148440|gb|ABS29717.1| nuclear receptor [Brugia malayi]
Length = 656
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 53/86 (61%)
Query: 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSC 61
N C+VCG+ A+GFH+G F CEGCK FF RS C + +CI+ + NR C+ C
Sbjct: 170 NYLCQVCGDRASGFHYGVFACEGCKGFFRRSIQQKIQYRPCTRSQQCIVARNNRNRCQHC 229
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKI 87
RL+KC+ VGMS+ R+GR K+
Sbjct: 230 RLQKCIRVGMSREAVRFGRVPKHEKV 255
>gi|28573920|ref|NP_788301.1| hormone receptor-like in 46, isoform C [Drosophila melanogaster]
gi|28380972|gb|AAO41453.1| hormone receptor-like in 46, isoform C [Drosophila melanogaster]
Length = 694
Score = 91.7 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N +C++++ NR C+ CRL+
Sbjct: 260 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKQCVVDRVNRNRCQYCRLQ 318
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 319 KCLKLGMSRDAVKFGRMS 336
>gi|324505790|gb|ADY42483.1| Nuclear hormone receptor E75 [Ascaris suum]
Length = 523
Score = 91.7 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VC + A+GFH+G F CEGCK FF RS C + +C I + NR C+ CRL+
Sbjct: 94 CQVCSDRASGFHYGVFACEGCKGFFRRSIQQKIQYRPCTKSQQCAIARNNRNRCQYCRLK 153
Query: 65 KCLMVGMSKSGSRYGR 80
KC+ VGMS+ R+GR
Sbjct: 154 KCIAVGMSRDAVRFGR 169
>gi|145228027|gb|ABP48738.1| E75 nuclear receptor [Daphnia magna]
Length = 942
Score = 91.7 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 100 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 159
Query: 65 KCLMVGMSKSGSRYGR 80
KC+ VGMS+ R+GR
Sbjct: 160 KCIAVGMSRDAVRFGR 175
>gi|45360935|ref|NP_988866.1| estrogen receptor 1 precursor [Xenopus (Silurana) tropicalis]
gi|35396533|gb|AAQ84780.1| estrogen receptor alpha [Xenopus (Silurana) tropicalis]
Length = 543
Score = 91.7 bits (226), Expect = 9e-17, Method: Composition-based stats.
Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 137 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 195
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQT 102
KC VGM K G R RR H +E+Q+Q T
Sbjct: 196 KCYEVGMMKGGIRKDRRGGRMLKHKRQKEEQEQKNDVT 233
>gi|89331174|dbj|BAE81788.1| estrogen receptor alpha [Xenopus (Silurana) tropicalis]
Length = 585
Score = 91.7 bits (226), Expect = 9e-17, Method: Composition-based stats.
Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 179 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 237
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQT 102
KC VGM K G R RR H +E+Q+Q T
Sbjct: 238 KCYEVGMMKGGIRKDRRGGRMLKHKRQKEEQEQKNDVT 275
>gi|328791756|ref|XP_392128.4| PREDICTED: probable nuclear hormone receptor HR3 [Apis mellifera]
Length = 522
Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N C++++ NR C+ CRL+
Sbjct: 71 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKNCVVDRVNRNRCQYCRLQ 129
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 130 KCLRLGMSRDAVKFGRMS 147
>gi|383861783|ref|XP_003706364.1| PREDICTED: probable nuclear hormone receptor HR3-like [Megachile
rotundata]
Length = 521
Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N C++++ NR C+ CRL+
Sbjct: 70 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKNCVVDRVNRNRCQYCRLQ 128
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 129 KCLRLGMSRDAVKFGRMS 146
>gi|340709667|ref|XP_003393424.1| PREDICTED: probable nuclear hormone receptor HR3-like [Bombus
terrestris]
Length = 522
Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N C++++ NR C+ CRL+
Sbjct: 71 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKNCVVDRVNRNRCQYCRLQ 129
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 130 KCLRLGMSRDAVKFGRMS 147
>gi|284157379|gb|ADB79814.1| E75 nuclear receptor [Daphnia pulex]
Length = 954
Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 98 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 157
Query: 65 KCLMVGMSKSGSRYGR 80
KC+ VGMS+ R+GR
Sbjct: 158 KCIAVGMSRDAVRFGR 173
>gi|270305458|gb|ACZ71480.1| hormone receptor 3 [Mythimna separata]
Length = 511
Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/101 (40%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS + + + +C N C++++ NR C+ CRL+
Sbjct: 61 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACVVDRVNRNRCQYCRLQ 119
Query: 65 KCLMVGMSKSGSRYGRRS--NWFKIHCLLQEQQQQAEQQTE 103
KCL +GMS+ ++GR S K+ ++ + Q QQT+
Sbjct: 120 KCLKLGMSRDAVKFGRMSKKQREKVEDEVRFHRAQMRQQTD 160
>gi|6015120|sp|P81559.1|ESR1_XENLA RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha;
AltName: Full=Estradiol receptor; AltName: Full=Nuclear
receptor subfamily 3 group A member 1
Length = 586
Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 180 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 238
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQ 97
KC VGM K G R RR H +E+Q+Q
Sbjct: 239 KCYEVGMMKGGIRKDRRGGRLLKHKRQKEEQEQ 271
>gi|118344432|ref|NP_001072038.1| nuclear receptor [Ciona intestinalis]
gi|70571084|dbj|BAE06676.1| nuclear receptor [Ciona intestinalis]
Length = 651
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 5/103 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS N + S C + CII++ NR C+ CRL+
Sbjct: 14 CKVCGDKSSGIHYGVITCEGCKGFFRRSQQNNYAYS-CPRHGNCIIDRSNRNRCQHCRLQ 72
Query: 65 KCLMVGMSKSGSRYGRRS----NWFKIHCLLQEQQQQAEQQTE 103
KCL GMSK ++GR S + + L Q+Q + + Q E
Sbjct: 73 KCLRAGMSKDAVKFGRMSKKQRDRLYLEVLKQQQMRAGQPQVE 115
>gi|585482|sp|Q08882.1|HR3_MANSE RecName: Full=Probable nuclear hormone receptor HR3; Short=mHR3;
AltName: Full=Nuclear receptor subfamily 1 group F
member 4
gi|396804|emb|CAA52654.1| MHR3 [Manduca sexta]
Length = 548
Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS + + + +C N C++++ NR C+ CRL+
Sbjct: 104 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACVVDRVNRNRCQYCRLQ 162
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 163 KCLKLGMSRDAVKFGRMS 180
>gi|71992375|ref|NP_001021667.1| Protein NHR-85, isoform a [Caenorhabditis elegans]
gi|17369898|sp|Q9XUK7.2|NHR85_CAEEL RecName: Full=Nuclear hormone receptor family member nhr-85
gi|11060535|emb|CAB04919.2| Protein NHR-85, isoform a [Caenorhabditis elegans]
gi|28396042|gb|AAO39184.1| nuclear receptor NHR-85 [Caenorhabditis elegans]
Length = 514
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VC + A+GFH+G F CEGCK FF RS + C +C+I + NR C+ CRL+
Sbjct: 113 CQVCSDKASGFHYGVFACEGCKGFFRRSIQQKITYRACTRAEDCLILRNNRNRCQCCRLK 172
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLG 108
KCL VGMS+ R+GR K E+ Q+ Q++R ++
Sbjct: 173 KCLAVGMSRDAVRFGRVPKREKARMF--EEMQKTNVQSQRDQIA 214
>gi|148232246|ref|NP_001083086.1| estrogen receptor 1 [Xenopus laevis]
gi|35396537|gb|AAQ84782.1| estrogen receptor alpha 1 [Xenopus laevis]
Length = 585
Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 179 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 237
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQ 97
KC VGM K G R RR H +E+Q+Q
Sbjct: 238 KCYEVGMMKGGIRKDRRGGRMLKHKRQKEEQEQ 270
>gi|321479389|gb|EFX90345.1| hypothetical protein DAPPUDRAFT_205205 [Daphnia pulex]
Length = 712
Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 100 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 159
Query: 65 KCLMVGMSKSGSRYGR 80
KC+ VGMS+ R+GR
Sbjct: 160 KCIAVGMSRDAVRFGR 175
>gi|293628866|dbj|BAJ05027.1| estrogen receptor alpha [Hynobius tokyoensis]
Length = 584
Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 178 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 236
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+++ +Q+ E
Sbjct: 237 KCYEVGMMKGGIRKDRRGGRLMKH---KRQKEEPDQKPE 272
>gi|6015045|sp|O77245.1|E75_METEN RecName: Full=Nuclear hormone receptor E75; AltName: Full=Nuclear
receptor subfamily 1 group D member 3
gi|3694976|gb|AAC71770.1| nuclear hormone receptor E75 [Metapenaeus ensis]
Length = 606
Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/104 (43%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 32 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 91
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLG 108
KC+ VGMS+ R+GR K L Q A+ Q ER L
Sbjct: 92 KCIAVGMSRDAVRFGRVPKREKAKILAAMQSVNAKSQ-ERAVLA 134
>gi|118344390|ref|NP_001072021.1| nuclear receptor [Ciona intestinalis]
gi|70571079|dbj|BAE06675.1| nuclear receptor [Ciona intestinalis]
Length = 802
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 5/103 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS N + S C + CII++ NR C+ CRL+
Sbjct: 165 CKVCGDKSSGIHYGVITCEGCKGFFRRSQQNNYAYS-CPRHGNCIIDRSNRNRCQHCRLQ 223
Query: 65 KCLMVGMSKSGSRYGRRS----NWFKIHCLLQEQQQQAEQQTE 103
KCL GMSK ++GR S + + L Q+Q + + Q E
Sbjct: 224 KCLRAGMSKDAVKFGRMSKKQRDRLYLEVLKQQQMRAGQPQVE 266
>gi|432957376|ref|XP_004085823.1| PREDICTED: nuclear receptor subfamily 1 group D member 2-like,
partial [Oryzias latipes]
Length = 528
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 54/90 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N+ C I + NR C+ CR +
Sbjct: 60 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNDSCPIMRVNRNRCQQCRFK 119
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCLMVGMS+ R+GR K LL+ Q
Sbjct: 120 KCLMVGMSRDSVRFGRIPKREKQRMLLEMQ 149
>gi|402589378|gb|EJW83310.1| retinoic acid receptor beta, partial [Wuchereria bancrofti]
Length = 216
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%)
Query: 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSC 61
N C+VCG+ A+GFH+G F CEGCK FF RS C + +CI+ + NR C+ C
Sbjct: 22 NYLCQVCGDRASGFHYGVFACEGCKGFFRRSIQQKIQYRPCTRSQQCIVARNNRNRCQHC 81
Query: 62 RLRKCLMVGMSKSGSRYGR 80
RL+KC+ VGMS+ R+GR
Sbjct: 82 RLQKCIRVGMSREAVRFGR 100
>gi|345971952|gb|ABU89808.2| nuclear receptor subfamily 1 group D variant 2 [Mytilus
galloprovincialis]
Length = 403
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 65/115 (56%), Gaps = 6/115 (5%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 24 CRVCGDKASGFHYGVHACEGCKGFFRRSIQQKIQYRPCLKNQQCNIMRVNRNRCQYCRLK 83
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE----RTKLGHPDLLLK 115
KC+ VGMS+ G R+GR K + EQ + QT+ T L +PD L++
Sbjct: 84 KCIAVGMSRDGVRFGRVPK--KEEARIIEQMHRVNCQTQVNQLHTLLQNPDDLIQ 136
>gi|357627930|gb|EHJ77448.1| hormone receptor 3C [Danaus plexippus]
Length = 698
Score = 90.9 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS + + + +C N C++++ NR C+ CRL+
Sbjct: 103 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACVVDRVNRNRCQYCRLQ 161
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 162 KCLKLGMSRDAVKFGRMS 179
>gi|154147686|ref|NP_001093675.1| nuclear receptor subfamily 1, group D, member 1 [Xenopus (Silurana)
tropicalis]
gi|134025606|gb|AAI35991.1| nr1d1 protein [Xenopus (Silurana) tropicalis]
Length = 522
Score = 90.9 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 47/76 (61%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR R
Sbjct: 115 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNETCSIVRINRNRCQQCRFR 174
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 175 KCLSVGMSRDAVRFGR 190
>gi|260836453|ref|XP_002613220.1| hypothetical protein BRAFLDRAFT_210589 [Branchiostoma floridae]
gi|229298605|gb|EEN69229.1| hypothetical protein BRAFLDRAFT_210589 [Branchiostoma floridae]
Length = 367
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 51/71 (71%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G ++CEGCK+FF RS + C N+C I++ R SC++CR R
Sbjct: 1 CRVCGDHASGFHYGVWSCEGCKAFFKRSIQQGQTDYICPGTNQCTIDRNRRKSCQACRYR 60
Query: 65 KCLMVGMSKSG 75
KCLMVGM+K G
Sbjct: 61 KCLMVGMTKDG 71
>gi|293628862|dbj|BAJ05025.1| estrogen receptor alpha [Cynops pyrrhogaster]
Length = 582
Score = 90.9 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/99 (43%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 178 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 236
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q++ A+Q+ E
Sbjct: 237 KCYEVGMMKGGIRKDRRGGRLIKH---KRQKEDADQKLE 272
>gi|189239421|ref|XP_974561.2| PREDICTED: similar to HR3 [Tribolium castaneum]
Length = 499
Score = 90.9 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N C++++ NR C+ CRL+
Sbjct: 59 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKNCVVDRVNRNRCQYCRLQ 117
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 118 KCLRLGMSRDAVKFGRMS 135
>gi|345482966|ref|XP_003424714.1| PREDICTED: LOW QUALITY PROTEIN: probable nuclear hormone receptor
HR3 [Nasonia vitripennis]
Length = 466
Score = 90.9 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N C++++ NR C+ CRL+
Sbjct: 14 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKNCVVDRVNRNRCQYCRLQ 72
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 73 KCLRLGMSRDAVKFGRMS 90
>gi|341875356|gb|EGT31291.1| CBN-NHR-85 protein [Caenorhabditis brenneri]
Length = 467
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 64/116 (55%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VC + A+GFH+G F CEGCK FF RS + C +C+I + NR C+ CRL+
Sbjct: 62 CQVCSDKASGFHYGVFACEGCKGFFRRSIQQKITYRACTRAEDCLILRNNRNRCQCCRLK 121
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDLLLKLDKFT 120
KCL VGMS+ R+GR K + Q+ + Q ++ + + +L + K T
Sbjct: 122 KCLAVGMSRDAVRFGRVPKREKARMFEEMQKTNVQSQRDQIAIQYENLNEVMHKMT 177
>gi|270305456|gb|ACZ71479.1| hormone receptor 3 [Xestia cnigrum]
Length = 510
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS + + + +C N C++++ NR C+ CRL+
Sbjct: 61 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACVVDRVNRNRCQYCRLQ 119
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 120 KCLKLGMSRDAVKFGRMS 137
>gi|195582120|ref|XP_002080876.1| GD26001 [Drosophila simulans]
gi|194192885|gb|EDX06461.1| GD26001 [Drosophila simulans]
Length = 627
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N +C++++ NR C+ CRL+
Sbjct: 436 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKQCVVDRVNRNRCQYCRLQ 494
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 495 KCLKLGMSRDAVKFGRMS 512
>gi|449279574|gb|EMC87146.1| Nuclear receptor ROR-beta, partial [Columba livia]
Length = 466
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 11 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CSRQRNCLIDRTNRNRCQHCRLQ 69
Query: 65 KCLMVGMSKSGSRYGRRSNWFK--IHCLLQEQQQQAEQ 100
KCL +GMS+ ++GR S + ++ +Q+ QQ EQ
Sbjct: 70 KCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQEQ 107
>gi|326934368|ref|XP_003213262.1| PREDICTED: nuclear receptor ROR-beta-like [Meleagris gallopavo]
Length = 658
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 11/106 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCK--------SFFGRSYNNLPSISECKNNNECIINKKNRT 56
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR
Sbjct: 195 CKICGDKSSGIHYGVITCEGCKVRAVRGRVGFFRRSQQNNASYS-CSRQRNCLIDRTNRN 253
Query: 57 SCKSCRLRKCLMVGMSKSGSRYGRRSNWFK--IHCLLQEQQQQAEQ 100
C+ CRL+KCL +GMS+ ++GR S + ++ +Q+ QQ+ EQ
Sbjct: 254 RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRQEQ 299
>gi|402593257|gb|EJW87184.1| hypothetical protein WUBG_01907, partial [Wuchereria bancrofti]
Length = 446
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 63/99 (63%), Gaps = 3/99 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS + L + +C +CI+++ NR C+ CRL+
Sbjct: 16 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTLNNY-QCPRQQKCIVDRVNRNRCQYCRLK 74
Query: 65 KCLMVGMSKSGSRYGRRS--NWFKIHCLLQEQQQQAEQQ 101
KCL +GMS+ ++GR S K+ ++ +Q AE Q
Sbjct: 75 KCLELGMSRDAVKFGRMSKKQREKVEDEVRMHKQMAEVQ 113
>gi|363743762|ref|XP_003642912.1| PREDICTED: nuclear receptor ROR-beta-like [Gallus gallus]
Length = 540
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 3/98 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 85 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CSRQRNCLIDRTNRNRCQHCRLQ 143
Query: 65 KCLMVGMSKSGSRYGRRSNWFK--IHCLLQEQQQQAEQ 100
KCL +GMS+ ++GR S + ++ +Q+ QQ+ EQ
Sbjct: 144 KCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRQEQ 181
>gi|166797033|gb|AAI59204.1| Rorab protein [Danio rerio]
Length = 492
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS S S C C+I++ +R C+ CRL+
Sbjct: 17 CKICGDKSSGIHYGVITCEGCKGFFRRSQQGTVSYS-CPRQKSCLIDRTSRNRCQHCRLQ 75
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERT 105
KCL VGMS+ ++GR S + + Q+ + +QQ ++T
Sbjct: 76 KCLAVGMSRDAVKFGRMSKKQRDSLFAEVQKHRQQQQDDKT 116
>gi|304361714|dbj|BAJ15289.1| estrogen receptor beta [Rhincodon typus]
Length = 536
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS + C N+C I+K R SC++CRLR
Sbjct: 166 CAVCNDFASGYHYGVWSCEGCKAFFKRSIQGHNAYI-CPATNQCTIDKNRRKSCQACRLR 224
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERT 105
KC VGM KS +R R S F L Q Q +++RT
Sbjct: 225 KCYEVGMMKSDTRRDRSSYRFSRQSRLSSPQAQHGSRSKRT 265
>gi|378705838|gb|AFC34771.1| RORalpha1 [Ctenopharyngodon idella]
Length = 474
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS S S C C+I++ +R C+ CRL+
Sbjct: 17 CKICGDKSSGIHYGVITCEGCKGFFRRSQQGTVSYS-CPRQKSCLIDRTSRNRCQHCRLQ 75
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERT 105
KCL VGMS+ ++GR S + + Q+ + +QQ E+
Sbjct: 76 KCLAVGMSRDAVKFGRMSKKQRDSLFAEVQKHRQQQQDEKV 116
>gi|170593425|ref|XP_001901465.1| steroid hormone receptor [Brugia malayi]
gi|158591532|gb|EDP30145.1| steroid hormone receptor, putative [Brugia malayi]
Length = 447
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 63/99 (63%), Gaps = 3/99 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS + L + +C +CI+++ NR C+ CRL+
Sbjct: 17 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTLNNY-QCPRQQKCIVDRVNRNRCQYCRLK 75
Query: 65 KCLMVGMSKSGSRYGRRS--NWFKIHCLLQEQQQQAEQQ 101
KCL +GMS+ ++GR S K+ ++ +Q AE Q
Sbjct: 76 KCLELGMSRDAVKFGRMSKKQREKVEDEVRMHKQMAEVQ 114
>gi|443723214|gb|ELU11745.1| hypothetical protein CAPTEDRAFT_62897, partial [Capitella teleta]
Length = 347
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 56/98 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 9 CRVCGDKASGFHYGVHACEGCKGFFRRSIQQKIQYRPCLKNQQCSIMRVNRNRCQYCRLK 68
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQT 102
KC+ VGMS+ R+GR K + Q Q+ A+ Q
Sbjct: 69 KCIAVGMSRDAVRFGRVPKREKAKIIEQMQKVNAQSQV 106
>gi|332017720|gb|EGI58394.1| Putative nuclear hormone receptor HR3 [Acromyrmex echinatior]
Length = 467
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N C++++ NR C+ CRL+
Sbjct: 63 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKNCVVDRVNRNRCQYCRLQ 121
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 122 KCLRLGMSRDAVKFGRMS 139
>gi|345971948|gb|ABU89807.2| nuclear receptor subfamily 1 group D variant 1 [Mytilus
galloprovincialis]
Length = 437
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 65/115 (56%), Gaps = 6/115 (5%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 24 CRVCGDKASGFHYGVHACEGCKGFFRRSIQQKIQYRPCLKNQQCNIMRVNRNRCQYCRLK 83
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE----RTKLGHPDLLLK 115
KC+ VGMS+ G R+GR K + EQ + QT+ T L +PD L++
Sbjct: 84 KCIAVGMSRDGVRFGRVPK--KEEARIIEQMHRVNCQTQVNQLHTLLQNPDDLIQ 136
>gi|72084364|ref|XP_783869.1| PREDICTED: peroxisome proliferator-activated receptor delta-like
[Strongylocentrotus purpuratus]
Length = 573
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/85 (48%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSC 61
+ C VCGE + FH+G +CEGCKSFF R+ +N IS +C+INK+ R C C
Sbjct: 107 DDKCWVCGEKSNTFHYGILSCEGCKSFFARASSN--HISYNCPTKQCVINKETRNRCMYC 164
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFK 86
R +KC+ VGMSK+ S+ GRRS K
Sbjct: 165 RWKKCVAVGMSKTASKLGRRSKQLK 189
>gi|389614467|dbj|BAM20281.1| nuclear hormone receptor E75A, partial [Papilio xuthus]
Length = 423
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 42 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 101
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGH----PDLLLKL 116
KC+ VGMS+ R+GR K L QQ + + E+ P LL ++
Sbjct: 102 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELEDAPRLLARV 157
>gi|35396541|gb|AAQ84784.1| estrogen receptor alpha 1 delta exon 1 [Xenopus laevis]
Length = 427
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 21 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 79
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQ 97
KC VGM K G R RR H +E+Q+Q
Sbjct: 80 KCYEVGMMKGGIRKDRRGGRMLKHKRQKEEQEQ 112
>gi|268529532|ref|XP_002629892.1| C. briggsae CBR-NHR-23 protein [Caenorhabditis briggsae]
Length = 597
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/105 (38%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C CI+++ NR C+ CRL+
Sbjct: 167 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSIVNY-QCPRQKNCIVDRVNRNRCQYCRLK 225
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGH 109
KC+ +GMS+ ++GR S K ++++ + +Q E + LG+
Sbjct: 226 KCIELGMSRDAVKFGRMSK--KQREKVEDEVRMHKQLAEASGLGY 268
>gi|7517|emb|CAA33611.1| unnamed protein product [Drosophila melanogaster]
Length = 1443
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 454 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 513
Query: 65 KCLMVGMSKSGSRYGR 80
KC+ VGMS+ R+GR
Sbjct: 514 KCIAVGMSRDAVRFGR 529
>gi|1435193|gb|AAC47163.1| hormone receptor 3 [Choristoneura fumiferana]
Length = 546
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS + + + +C N C++++ NR C+ CRL+
Sbjct: 102 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACVVDRVNRNRCQYCRLQ 160
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GM + ++GR S
Sbjct: 161 KCLKLGMRRDAVKFGRMS 178
>gi|348526470|ref|XP_003450742.1| PREDICTED: peroxisome proliferator-activated receptor alpha-like
isoform 2 [Oreochromis niloticus]
Length = 475
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VC + A+GFH+G CEGCK FF R+ +C+ N C I KKNR C+
Sbjct: 88 LNLECRVCSDKASGFHYGVHACEGCKGFFRRTIRLKLEYDKCERN--CKIQKKNRNKCQY 145
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDLLLK 115
CR KCL VGMS + R+GR K+ L+E+ + E++ E + L++
Sbjct: 146 CRFHKCLSVGMSHNAIRFGRMPQAEKLK--LKEESKMVEKEVESPLMSDHKFLVR 198
>gi|348526468|ref|XP_003450741.1| PREDICTED: peroxisome proliferator-activated receptor alpha-like
isoform 1 [Oreochromis niloticus]
Length = 475
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VC + A+GFH+G CEGCK FF R+ +C+ N C I KKNR C+
Sbjct: 88 LNLECRVCSDKASGFHYGVHACEGCKGFFRRTIRLKLEYDKCERN--CKIQKKNRNKCQY 145
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDLLLK 115
CR KCL VGMS + R+GR K+ L+E+ + E++ E + L++
Sbjct: 146 CRFHKCLSVGMSHNAIRFGRMPQAEKLK--LKEESKMVEKEVESPLMSDHKFLVR 198
>gi|308470171|ref|XP_003097320.1| CRE-NHR-85 protein [Caenorhabditis remanei]
gi|308240292|gb|EFO84244.1| CRE-NHR-85 protein [Caenorhabditis remanei]
Length = 499
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 66/125 (52%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VC + A+GFH+G F CEGCK FF RS C +C+I + NR C+ CRL+
Sbjct: 114 CQVCSDKASGFHYGVFACEGCKGFFRRSIQQKIQYRACTRVEDCLILRNNRNRCQCCRLK 173
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDLLLKLDKFTNNNT 124
KCL VGMS+ R+GR K + Q+ + Q ++ + + +L + K +
Sbjct: 174 KCLAVGMSRDAVRFGRVPKREKARMFEEMQKTNVQSQRDQIAIQYENLSEVMHKMNHAFA 233
Query: 125 IVTNN 129
++ N
Sbjct: 234 VLQNT 238
>gi|293628870|dbj|BAJ05029.1| estrogen receptor alpha [Ambystoma mexicanum]
Length = 586
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 180 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 238
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+++ Q+ E
Sbjct: 239 KCYEVGMMKGGIRKDRRGGRLMKH---KRQKEEPNQKPE 274
>gi|262358091|gb|ACY56690.1| HR3 nuclear receptor [Daphnia magna]
Length = 622
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C C++++ NR C+ CRL+
Sbjct: 156 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRQKNCVVDRVNRNRCQYCRLQ 214
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 215 KCLALGMSRDAVKFGRMS 232
>gi|118175891|gb|ABK76300.1| peroxisome proliferator-activated receptor alpha [Rachycentron
canadum]
gi|157418571|gb|ABV55019.1| peroxisome proliferator-activated receptor alpha [Rachycentron
canadum]
Length = 476
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/130 (36%), Positives = 69/130 (53%), Gaps = 10/130 (7%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VC + A+GFH+G CEGCK FF R+ +C+ N C + KKNR C+
Sbjct: 86 LNLECRVCSDKASGFHYGVHACEGCKGFFRRTIRLKLEYDKCERN--CKVQKKNRNKCQY 143
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDLLLK----- 115
CR KCL VGMS + R+GR K+ L+ + + E+Q E L + L++
Sbjct: 144 CRFHKCLSVGMSHNAIRFGRMPQAEKLK--LKAESKMVEKQVESPMLANHKTLVRQIHEA 201
Query: 116 -LDKFTNNNT 124
+ F+ N T
Sbjct: 202 YMKNFSMNKT 211
>gi|2078499|gb|AAB54059.1| hormone receptor 3C [Choristoneura fumiferana]
Length = 651
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS + + + +C N C++++ NR C+ CRL+
Sbjct: 34 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACVVDRVNRNRCQYCRLQ 92
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GM + ++GR S
Sbjct: 93 KCLKLGMRRDAVKFGRMS 110
>gi|270010992|gb|EFA07440.1| hormone receptor in 46-like protein [Tribolium castaneum]
Length = 529
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N C++++ NR C+ CRL+
Sbjct: 59 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKNCVVDRVNRNRCQYCRLQ 117
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 118 KCLRLGMSRDAVKFGRMS 135
>gi|259013193|ref|NP_001158347.1| peroxisome proliferator-activated receptor alpha 2 [Oryzias
latipes]
gi|229619546|dbj|BAH58103.1| peroxisome proliferator-activated receptor alpha 2 [Oryzias
latipes]
Length = 480
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/111 (39%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VC + A+GFH+G CEGCK FF R+ ++C+ N C I KKNR C+ CR
Sbjct: 92 CRVCSDRASGFHYGVHACEGCKGFFRRTIRLKLEYNKCERN--CKIQKKNRNKCQYCRFN 149
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDLLLK 115
KC++VGMS + R+GR + K+ L+E+ + AE++ E G L++
Sbjct: 150 KCMIVGMSHNAIRFGRMPHAEKLK--LKEESKVAEKEVESCMEGDGKTLVR 198
>gi|410911348|ref|XP_003969152.1| PREDICTED: nuclear receptor subfamily 1 group D member 2-like
[Takifugu rubripes]
Length = 573
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 53/90 (58%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 92 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNESCPIMRINRNRCQQCRFK 151
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCLMVGMS+ R+GR K LL+ Q
Sbjct: 152 KCLMVGMSRDSVRFGRIPKREKQRMLLEMQ 181
>gi|408843716|gb|AFU93863.1| estrogen receptor alpha, partial [Pelodiscus sinensis]
Length = 498
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 12/141 (8%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 171 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 226
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHP-----DLLLKL 116
RLRKC VGM K G R RR H +E+Q T T++ P L++K
Sbjct: 227 RLRKCYEVGMMKGGIRKDRRGGRMLKHKRQREEQDARSGGTASTEMRTPTLWTSPLVIKH 286
Query: 117 DKFTNNNTIVTNNNLILQLLQ 137
K + +T++ ++ LL+
Sbjct: 287 SKKNSPALALTDDQMVSALLE 307
>gi|148616245|gb|ABQ96884.1| estrogen receptor [Nucella lapillus]
Length = 450
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/81 (48%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C+VC + A+GFH+G ++CEGCK+FF RS P C N C I+K R SC++CR
Sbjct: 61 KLCQVCNDNASGFHYGVWSCEGCKAFFKRSIQG-PVDYMCPATNNCTIDKHRRKSCQACR 119
Query: 63 LRKCLMVGMSKSGSRYGRRSN 83
LRKC VGM+K R R+S+
Sbjct: 120 LRKCYEVGMNKGSQRKDRKSS 140
>gi|321476560|gb|EFX87520.1| hypothetical protein DAPPUDRAFT_311954 [Daphnia pulex]
Length = 616
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C C++++ NR C+ CRL+
Sbjct: 186 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRQKNCVVDRVNRNRCQYCRLQ 244
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 245 KCLALGMSRDAVKFGRMS 262
>gi|262358093|gb|ACY56691.1| HR3 nuclear receptor [Daphnia pulex]
Length = 636
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C C++++ NR C+ CRL+
Sbjct: 169 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRQKNCVVDRVNRNRCQYCRLQ 227
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 228 KCLALGMSRDAVKFGRMS 245
>gi|390334917|ref|XP_785820.2| PREDICTED: nuclear hormone receptor E75-like [Strongylocentrotus
purpuratus]
Length = 357
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 49/76 (64%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G CEGCK FF RS + C +EC+I + NR C+ CRL+
Sbjct: 14 CRVCGDKASGFHYGVHACEGCKGFFRRSIQHNVKYRVCSKGDECLIMRINRNRCQYCRLK 73
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMSK R GR
Sbjct: 74 KCLAVGMSKDAVRLGR 89
>gi|308460055|ref|XP_003092336.1| CRE-NHR-23 protein [Caenorhabditis remanei]
gi|308253567|gb|EFO97519.1| CRE-NHR-23 protein [Caenorhabditis remanei]
Length = 597
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/104 (38%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C CI+++ NR C+ CRL+
Sbjct: 139 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSIVNY-QCPRQKNCIVDRVNRNRCQYCRLK 197
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLG 108
KC+ +GMS+ ++GR S K ++++ + +Q E + LG
Sbjct: 198 KCIELGMSRDAVKFGRMSK--KQREKVEDEVRMHKQLAEASGLG 239
>gi|51235736|gb|AAT98633.1| orphan nuclear receptor E75C [Manduca sexta]
Length = 256
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 99 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 158
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQ---QQAEQQTERTKLGH-PDLLLKL 116
KC+ VGMS+ R+GR K L QQ +A +Q +L P LL ++
Sbjct: 159 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSSTSRAHEQAAAAELDDAPRLLARV 214
>gi|47208222|emb|CAF99979.1| unnamed protein product [Tetraodon nigroviridis]
Length = 500
Score = 89.4 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 4/102 (3%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VC + A+GFH+G CEGCK FF R+ +C+NN C I KKNR C+
Sbjct: 86 LNLECRVCSDKASGFHYGVHACEGCKGFFRRTIRLKLEYDKCENN--CKIQKKNRNKCQY 143
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQT 102
CR KCL VGMS + R+GR K+ L+ + + E++T
Sbjct: 144 CRFHKCLSVGMSHNAIRFGRMPQAEKLK--LKAENKMVEKET 183
>gi|395532574|ref|XP_003768345.1| PREDICTED: nuclear receptor subfamily 1 group D member 1
[Sarcophilus harrisii]
Length = 598
Score = 89.4 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 47/76 (61%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 134 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNESCSIIRINRNRCQQCRFK 193
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 194 KCLSVGMSRDAVRFGR 209
>gi|391339168|ref|XP_003743924.1| PREDICTED: probable nuclear hormone receptor HR3-like [Metaseiulus
occidentalis]
Length = 720
Score = 89.4 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 8/106 (7%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C C++++ NR C+ CRL+
Sbjct: 228 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRQKNCVVDRVNRNRCQYCRLQ 286
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHP 110
KCL +GMS+ ++GR S Q ++ + E + R +L P
Sbjct: 287 KCLALGMSRDAVKFGRMSK-------KQREKVEDEVRFHRAQLSRP 325
>gi|312070472|ref|XP_003138162.1| steroid hormone receptor [Loa loa]
Length = 421
Score = 89.0 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 63/99 (63%), Gaps = 3/99 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS + L + +C +CI+++ NR C+ CRL+
Sbjct: 17 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTLNNY-QCPRQQKCIVDRVNRNRCQYCRLK 75
Query: 65 KCLMVGMSKSGSRYGRRS--NWFKIHCLLQEQQQQAEQQ 101
KCL +GMS+ ++GR S K+ ++ +Q AE Q
Sbjct: 76 KCLELGMSRDAVKFGRMSKKQREKVEDEVRMHKQMAEVQ 114
>gi|315360629|ref|NP_001186755.1| RAR-related orphan receptor gamma 2 [Oncorhynchus mykiss]
gi|313760286|emb|CAT65102.1| RAR-related orphan receptor gamma 2 protein [Oncorhynchus mykiss]
Length = 469
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N ++ C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQN-NAMYSCSRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQ 101
KCL +GMS+ ++GR S + + Q+ QA Q+
Sbjct: 69 KCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQASQE 105
>gi|410916945|ref|XP_003971947.1| PREDICTED: estrogen receptor beta-like [Takifugu rubripes]
Length = 559
Score = 89.0 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 40/79 (50%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC+SCRLR
Sbjct: 157 CAVCHDYASGYHYGVWSCEGCKAFFKRSIQRQNDYI-CPATNQCTIDKNRRKSCQSCRLR 215
Query: 65 KCLMVGMSKSGSRYGRRSN 83
KC VGM+K G R RRS+
Sbjct: 216 KCYEVGMTKCGMRKERRSS 234
>gi|315360631|ref|NP_001186756.1| RAR-related orphan receptor gamma 1 [Oncorhynchus mykiss]
gi|313760284|emb|CAT65098.1| RAR-related orphan receptor gamma 1 protein [Oncorhynchus mykiss]
Length = 469
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N ++ C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQN-NAMYSCSRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQ 101
KCL +GMS+ ++GR S + + Q+ QA Q+
Sbjct: 69 KCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQASQE 105
>gi|195442298|ref|XP_002068895.1| GK18019 [Drosophila willistoni]
gi|194164980|gb|EDW79881.1| GK18019 [Drosophila willistoni]
Length = 524
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N +C++++ NR C+ CRL+
Sbjct: 53 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKQCVVDRVNRNRCQYCRLQ 111
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 112 KCLKLGMSRDAVKFGRMS 129
>gi|195028616|ref|XP_001987172.1| GH20117 [Drosophila grimshawi]
gi|193903172|gb|EDW02039.1| GH20117 [Drosophila grimshawi]
Length = 487
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N +C++++ NR C+ CRL+
Sbjct: 51 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKQCVVDRVNRNRCQYCRLQ 109
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 110 KCLKLGMSRDAVKFGRMS 127
>gi|45383934|ref|NP_990536.1| nuclear receptor subfamily 1 group D member 2 [Gallus gallus]
gi|1429379|emb|CAA56551.1| REV-ERBb [Gallus gallus]
Length = 549
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 53/90 (58%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C NN C I + NR C+ CR +
Sbjct: 78 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNNNCSIMRMNRNRCQQCRFK 137
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 138 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 167
>gi|449492745|ref|XP_002194827.2| PREDICTED: nuclear receptor subfamily 1 group D member 2
[Taeniopygia guttata]
Length = 477
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 53/90 (58%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C NN C I + NR C+ CR +
Sbjct: 5 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNNSCSIMRMNRNRCQQCRFK 64
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 65 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 94
>gi|20151433|gb|AAM11076.1| GH21112p [Drosophila melanogaster]
gi|220947174|gb|ACL86130.1| Hr46-PB [synthetic construct]
gi|220952516|gb|ACL88801.1| Hr46-PB [synthetic construct]
Length = 444
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N +C++++ NR C+ CRL+
Sbjct: 10 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKQCVVDRVNRNRCQYCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLKLGMSRDAVKFGRMS 86
>gi|195120906|ref|XP_002004962.1| GI20211 [Drosophila mojavensis]
gi|193910030|gb|EDW08897.1| GI20211 [Drosophila mojavensis]
Length = 487
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N +C++++ NR C+ CRL+
Sbjct: 51 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKQCVVDRVNRNRCQYCRLQ 109
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 110 KCLKLGMSRDAVKFGRMS 127
>gi|125808571|ref|XP_001360799.1| GA17350 [Drosophila pseudoobscura pseudoobscura]
gi|195151019|ref|XP_002016447.1| GL10487 [Drosophila persimilis]
gi|54635971|gb|EAL25374.1| GA17350 [Drosophila pseudoobscura pseudoobscura]
gi|194110294|gb|EDW32337.1| GL10487 [Drosophila persimilis]
Length = 487
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N +C++++ NR C+ CRL+
Sbjct: 51 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKQCVVDRVNRNRCQYCRLQ 109
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 110 KCLKLGMSRDAVKFGRMS 127
>gi|218505955|gb|ABN49269.2| IP15960p [Drosophila melanogaster]
Length = 487
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N +C++++ NR C+ CRL+
Sbjct: 51 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKQCVVDRVNRNRCQYCRLQ 109
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 110 KCLKLGMSRDAVKFGRMS 127
>gi|28573924|ref|NP_788303.1| hormone receptor-like in 46, isoform A [Drosophila melanogaster]
gi|386767645|ref|NP_001246236.1| hormone receptor-like in 46, isoform F [Drosophila melanogaster]
gi|195475280|ref|XP_002089912.1| GE21721 [Drosophila yakuba]
gi|399369|sp|P31396.1|HR3_DROME RecName: Full=Probable nuclear hormone receptor HR3; Short=dHR3;
AltName: Full=Nuclear receptor subfamily 1 group F
member 4
gi|157230|gb|AAA28461.1| DHR3 [Drosophila melanogaster]
gi|7303778|gb|AAF58826.1| hormone receptor-like in 46, isoform A [Drosophila melanogaster]
gi|194176013|gb|EDW89624.1| GE21721 [Drosophila yakuba]
gi|373251236|gb|AEY64286.1| FI17818p1 [Drosophila melanogaster]
gi|383302381|gb|AFH07991.1| hormone receptor-like in 46, isoform F [Drosophila melanogaster]
Length = 487
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N +C++++ NR C+ CRL+
Sbjct: 51 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKQCVVDRVNRNRCQYCRLQ 109
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 110 KCLKLGMSRDAVKFGRMS 127
>gi|348535606|ref|XP_003455290.1| PREDICTED: nuclear receptor subfamily 1 group D member 2-like
[Oreochromis niloticus]
Length = 627
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 53/90 (58%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 125 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNESCPIMRINRNRCQQCRFK 184
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL+VGMS+ R+GR K LL+ Q
Sbjct: 185 KCLLVGMSRDSVRFGRIPKREKQRMLLEMQ 214
>gi|195383602|ref|XP_002050515.1| GJ20161 [Drosophila virilis]
gi|194145312|gb|EDW61708.1| GJ20161 [Drosophila virilis]
Length = 487
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N +C++++ NR C+ CRL+
Sbjct: 51 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKQCVVDRVNRNRCQYCRLQ 109
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 110 KCLKLGMSRDAVKFGRMS 127
>gi|405967572|gb|EKC32720.1| Estrogen receptor [Crassostrea gigas]
Length = 485
Score = 88.6 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSC 61
N+ C+VC + A+GFH+G ++CEGCK+FF RS P C N C I+K R SC++C
Sbjct: 130 NKLCQVCSDNASGFHYGVWSCEGCKAFFKRSIQG-PVDYVCPATNTCTIDKHRRKSCQAC 188
Query: 62 RLRKCLMVGMSKSGSRYGRRSN 83
RLRKC VGM+K R R+ +
Sbjct: 189 RLRKCYEVGMNKGSQRKERKGS 210
>gi|161076500|ref|NP_001097256.1| hormone receptor-like in 46, isoform D [Drosophila melanogaster]
gi|157400270|gb|ABV53751.1| hormone receptor-like in 46, isoform D [Drosophila melanogaster]
Length = 456
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N +C++++ NR C+ CRL+
Sbjct: 22 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKQCVVDRVNRNRCQYCRLQ 80
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 81 KCLKLGMSRDAVKFGRMS 98
>gi|327279969|ref|XP_003224727.1| PREDICTED: estrogen receptor [Anolis carolinensis]
Length = 586
Score = 88.6 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 5/137 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 177 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 235
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQ----AEQQTERTKLGHPDLLLKLDKFT 120
KC VGM K G R RR H +E+ A + T L L++K K
Sbjct: 236 KCYEVGMMKGGIRKDRRGGRMLKHKRQREENDSRNAGALTEARSTALWPSPLMIKHSKKN 295
Query: 121 NNNTIVTNNNLILQLLQ 137
+ +T + ++ LL+
Sbjct: 296 SPALSLTADQMVSALLE 312
>gi|442623145|ref|NP_001260854.1| hormone receptor-like in 46, isoform H [Drosophila melanogaster]
gi|440214256|gb|AGB93387.1| hormone receptor-like in 46, isoform H [Drosophila melanogaster]
Length = 529
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N +C++++ NR C+ CRL+
Sbjct: 51 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKQCVVDRVNRNRCQYCRLQ 109
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 110 KCLKLGMSRDAVKFGRMS 127
>gi|124001517|dbj|BAF45381.1| estrogen receptor [Crassostrea gigas]
Length = 485
Score = 88.6 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSC 61
N+ C+VC + A+GFH+G ++CEGCK+FF RS P C N C I+K R SC++C
Sbjct: 130 NKLCQVCSDNASGFHYGVWSCEGCKAFFKRSIQG-PVDYVCPATNTCTIDKHRRKSCQAC 188
Query: 62 RLRKCLMVGMSKSGSRYGRRSN 83
RLRKC VGM+K R R+ +
Sbjct: 189 RLRKCYEVGMNKGSQRKERKGS 210
>gi|449277860|gb|EMC85882.1| Estrogen receptor, partial [Columba livia]
Length = 590
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 60/100 (60%), Gaps = 6/100 (6%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS + C N+C I+K R SC++CRLR
Sbjct: 179 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGRHNDYMCPATNQCTIDKNRRKSCQACRLR 238
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
KC VGM K G R RR + +Q++Q E+Q R
Sbjct: 239 KCYEVGMMKGGIRKDRRGG------RMMKQKRQREEQDSR 272
>gi|148233501|ref|NP_001091098.1| peroxisome proliferators-activated receptor alpha2 [Takifugu
rubripes]
gi|138996281|dbj|BAF52668.1| peroxisome proliferators-activated receptor alpha2 [Takifugu
rubripes]
Length = 478
Score = 88.6 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/102 (40%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VC + A+GFH+G CEGCK FF R+ +C+NN C I KKNR C+
Sbjct: 88 LNLECRVCSDKASGFHYGVHACEGCKGFFRRTIRLKLEYDKCENN--CKIQKKNRNKCQY 145
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQT 102
CR KCL VGMS + R+GR K+ + + + E+ +
Sbjct: 146 CRFHKCLSVGMSHNAIRFGRMPQAEKLKLKAENKMVEKEEAS 187
>gi|66793362|ref|NP_001019402.1| estrogen receptor [Felis catus]
gi|75069755|sp|Q53AD2.1|ESR1_FELCA RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha;
AltName: Full=Estradiol receptor; AltName: Full=Nuclear
receptor subfamily 3 group A member 1
gi|51860645|gb|AAU11443.1| estrogen receptor alpha [Felis catus]
Length = 595
Score = 88.6 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ + E + E
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDEGEGRNE 279
>gi|194206592|ref|XP_001918176.1| PREDICTED: nuclear receptor ROR-alpha-like [Equus caballus]
Length = 839
Score = 88.6 bits (218), Expect = 8e-16, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 389 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 447
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 448 KCLAVGMSRDAVKFGRMS 465
>gi|194753930|ref|XP_001959258.1| GF12134 [Drosophila ananassae]
gi|190620556|gb|EDV36080.1| GF12134 [Drosophila ananassae]
Length = 448
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N +C++++ NR C+ CRL+
Sbjct: 51 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKQCVVDRVNRNRCQYCRLQ 109
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 110 KCLKLGMSRDAVKFGRMS 127
>gi|328710767|ref|XP_001952732.2| PREDICTED: ecdysone-induced protein 78C-like [Acyrthosiphon pisum]
Length = 570
Score = 88.2 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+G+H+G +CEGCK FF RS C + +C++ + NR C+ CR +
Sbjct: 151 CRVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEY-RCLRDGKCLVIRLNRNRCQYCRFK 209
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ RYGR
Sbjct: 210 KCLTVGMSRDSVRYGR 225
>gi|334321961|ref|XP_001370409.2| PREDICTED: retinoic acid receptor RXR-gamma-like [Monodelphis
domestica]
Length = 473
Score = 88.2 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 12/108 (11%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+ CR +
Sbjct: 149 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQYCRYQ 207
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
KCL++GM + + R Q +++AE + E T GH D+
Sbjct: 208 KCLVMGMKREAVQEER-----------QRSRERAENEVESTSSGHEDM 244
>gi|443722972|gb|ELU11613.1| hypothetical protein CAPTEDRAFT_227484 [Capitella teleta]
Length = 728
Score = 88.2 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 4 TCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRL 63
+CKVCG+ A+GFH+G +CEGCK FF R + C N+ +C I +R SC+ CRL
Sbjct: 131 SCKVCGDEASGFHYGVDSCEGCKGFFRRCITQGMN-HRCSNDEKCEITPFSRNSCQYCRL 189
Query: 64 RKCLMVGMSKSGSRYGRRSNWFK 86
+KC VGMS+ SR GRR K
Sbjct: 190 KKCFSVGMSREASRLGRRPKRLK 212
>gi|114050435|dbj|BAF30926.1| estrogen receptor alpha [Andrias japonicus]
Length = 584
Score = 88.2 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 41/97 (42%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 178 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 236
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQ 101
KC VGM K G R RR H + Q+++ +Q+
Sbjct: 237 KCYEVGMMKGGIRKDRRGGRLMKH---KRQKEEPDQK 270
>gi|5702091|gb|AAD47137.1|AF061181_1 green fluorescent protein-estrogen receptor alpha fusion [Mammalian
expression vector pCI-nGL1-HEGO]
Length = 866
Score = 88.2 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 456 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 514
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 515 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRGE 550
>gi|144687066|gb|ABP02024.1| ecdysone response nuclear receptor E75A [Oncopeltus fasciatus]
Length = 690
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 52/91 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+ CG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 46 CRACGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCAILRINRNRCQYCRLK 105
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
KC+ VGMS+ R+GR K L QQ
Sbjct: 106 KCIAVGMSRDAVRFGRVPKREKARILAAMQQ 136
>gi|324512722|gb|ADY45259.1| Nuclear hormone receptor family member nhr-23 [Ascaris suum]
Length = 469
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/102 (37%), Positives = 62/102 (60%), Gaps = 10/102 (9%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C C +++ NR C+ CRL+
Sbjct: 55 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRQKNCTVDRVNRNRCQFCRLK 113
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTK 106
KCL +GMS+ ++GR S ++Q+++ E + K
Sbjct: 114 KCLELGMSRDAVKFGRMS---------KKQREKVEDEVRMHK 146
>gi|339252186|ref|XP_003371316.1| nuclear hormone receptor family member nhr-23 [Trichinella
spiralis]
gi|316968466|gb|EFV52739.1| nuclear hormone receptor family member nhr-23 [Trichinella
spiralis]
Length = 501
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 63/98 (64%), Gaps = 9/98 (9%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C + C++++ NR C+ CRL+
Sbjct: 71 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVTNY-QCPRSKSCVVDRVNRNRCQYCRLK 129
Query: 65 KCLMVGMSKSGSRYGRRS--------NWFKIHCLLQEQ 94
KCL +GMS+ ++GR S + ++H LQEQ
Sbjct: 130 KCLELGMSRDAVKFGRMSKKQREKVEDEVRMHKQLQEQ 167
>gi|130493601|ref|NP_001076288.1| RAR-related orphan receptor C a [Danio rerio]
gi|126508457|gb|ABO15414.1| retinoid-related orphan receptor c [Danio rerio]
Length = 479
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N ++ C CII++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQN-NAMYSCSRQRNCIIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRSNWFK--IHCLLQEQQQQAEQ 100
KCL +GMS+ ++GR S + ++ +Q+ QQ E+
Sbjct: 69 KCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQER 106
>gi|238550133|ref|NP_001154805.1| peroxisome proliferator-activated receptor alpha a [Danio rerio]
Length = 470
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/111 (41%), Positives = 61/111 (54%), Gaps = 12/111 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VC + A+GFH+G CEGCK FF R+ +C+ N C I KKNR C+ CR R
Sbjct: 99 CRVCADRASGFHYGVHACEGCKGFFRRTIRLKLEYDKCERN--CKIQKKNRNKCQYCRFR 156
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQT---ERTKLGHPDL 112
KCL VGMS + R+GR ++Q+ +AEQ E K PD+
Sbjct: 157 KCLAVGMSHNAIRFGRIPQ-------SEKQRLKAEQDVSGKEEHKCQQPDM 200
>gi|449273802|gb|EMC83188.1| Nuclear receptor subfamily 1 group D member 2, partial [Columba
livia]
Length = 576
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 53/90 (58%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C NN C I + NR C+ CR +
Sbjct: 104 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNNNCSIMRMNRNRCQQCRFK 163
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 164 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 193
>gi|47824866|ref|NP_001001443.1| estrogen receptor [Bos taurus]
gi|55584164|sp|P49884.3|ESR1_BOVIN RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha;
AltName: Full=Estradiol receptor; AltName: Full=Nuclear
receptor subfamily 3 group A member 1
gi|42795679|gb|AAS46251.1| estrogen receptor alpha [Bos taurus]
Length = 596
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/104 (41%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 186 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 244
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLG 108
KC VGM K G R RR H + Q+ E + E G
Sbjct: 245 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRNEAVPSG 285
>gi|242005002|ref|XP_002423364.1| hormone receptor hr3, putative [Pediculus humanus corporis]
gi|212506394|gb|EEB10626.1| hormone receptor hr3, putative [Pediculus humanus corporis]
Length = 599
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N C++++ NR C+ CRL+
Sbjct: 45 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKNCVVDRVNRNRCQYCRLQ 103
Query: 65 KCLMVGMSKSGSRYGRRS--NWFKIHCLLQEQQQQAEQQTERT 105
KCL +GMS+ ++GR S K+ ++ + Q Q TE T
Sbjct: 104 KCLRLGMSRDAVKFGRMSKKQREKVEDEVRFHRAQQRQATEST 146
>gi|341882910|gb|EGT38845.1| hypothetical protein CAEBREN_04090 [Caenorhabditis brenneri]
Length = 515
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/105 (37%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C C++++ NR C+ CRL+
Sbjct: 88 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSIVNY-QCPRQKNCVVDRVNRNRCQYCRLK 146
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGH 109
KC+ +GMS+ ++GR S K ++++ + +Q E LG+
Sbjct: 147 KCIELGMSRDAVKFGRMSK--KQREKVEDEVRMHKQLAEANGLGY 189
>gi|50233771|ref|NP_571140.1| nuclear receptor subfamily 1 group D member 2 [Danio rerio]
gi|49257184|gb|AAH74065.1| Nuclear receptor subfamily 1, group D, member 2b [Danio rerio]
gi|182890554|gb|AAI64697.1| Nr1d2b protein [Danio rerio]
Length = 578
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 52/88 (59%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 86 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNESCPIMRINRNRCQQCRFK 145
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQ 92
KCL+VGMS+ R+GR K LL+
Sbjct: 146 KCLLVGMSRDAVRFGRIPKREKQRMLLE 173
>gi|301618956|ref|XP_002938868.1| PREDICTED: nuclear receptor ROR-beta-like [Xenopus (Silurana)
tropicalis]
Length = 450
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N + S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNANYS-CSRQRNCMIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRSNWFK--IHCLLQEQQQQAEQQTER 104
KCL +GMS+ ++GR S + ++ +Q+ QQ EQ R
Sbjct: 69 KCLELGMSRDAVKFGRMSKKQRDSLYAEVQKHQQNQEQVLAR 110
>gi|14994043|gb|AAK76396.1| Rev-Erb beta 2 [Danio rerio]
Length = 592
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 52/88 (59%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 100 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNESCPIMRINRNRCQQCRFK 159
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQ 92
KCL+VGMS+ R+GR K LL+
Sbjct: 160 KCLLVGMSRDAVRFGRIPKREKQRMLLE 187
>gi|73945701|ref|XP_533454.2| PREDICTED: estrogen receptor isoform 1 [Canis lupus familiaris]
Length = 596
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 52/141 (36%), Positives = 73/141 (51%), Gaps = 12/141 (8%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 186 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 244
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE-------RTKLGHPD-LLLKL 116
KC VGM K G R RR H + Q+ E + E RT P LL+K
Sbjct: 245 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRNEVGSSGDVRTSSLWPSPLLIKH 301
Query: 117 DKFTNNNTIVTNNNLILQLLQ 137
K + +T + ++ LL+
Sbjct: 302 TKKNSPALSLTADQMVSALLE 322
>gi|61657903|ref|NP_113953.1| retinoic acid receptor RXR-gamma [Rattus norvegicus]
gi|81888393|sp|Q5BJR8.1|RXRG_RAT RecName: Full=Retinoic acid receptor RXR-gamma; AltName:
Full=Nuclear receptor subfamily 2 group B member 3;
AltName: Full=Retinoid X receptor gamma
gi|60551535|gb|AAH91363.1| Retinoid X receptor gamma [Rattus norvegicus]
gi|149058122|gb|EDM09279.1| retinoid X receptor gamma, isoform CRA_a [Rattus norvegicus]
Length = 463
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECASTGHEDM 234
>gi|109945585|dbj|BAC66480.2| estrogen receptor [Reishia clavigera]
Length = 527
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C+VC + A+GFH+G ++CEGCK+FF RS P C N C I+K R SC++CR
Sbjct: 135 KLCQVCNDNASGFHYGVWSCEGCKAFFKRSIQG-PVDYMCPATNNCTIDKHRRKSCQACR 193
Query: 63 LRKCLMVGMSKSGSRYGRR 81
LRKC VGM+K R R+
Sbjct: 194 LRKCYEVGMNKGSQRKDRK 212
>gi|68132034|gb|AAY85283.1| RORgamma-B [Danio rerio]
Length = 480
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N ++ C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQN-NAMYSCSRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ R+GR S
Sbjct: 69 KCLALGMSRDAVRFGRMS 86
>gi|313757601|gb|ADR78566.1| ecdysone response nuclear receptor E75A [Agelena silvatica]
Length = 916
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 54/94 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 38 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 97
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQA 98
KC+ VGMS+ R+GR K L Q+ A
Sbjct: 98 KCIAVGMSRDAVRFGRVPKREKAKILAAMQKVNA 131
>gi|291397152|ref|XP_002714993.1| PREDICTED: estrogen receptor alpha-like [Oryctolagus cuniculus]
Length = 598
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 188 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 246
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 247 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRNE 282
>gi|341895989|gb|EGT51924.1| hypothetical protein CAEBREN_02985 [Caenorhabditis brenneri]
Length = 457
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/105 (37%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C C++++ NR C+ CRL+
Sbjct: 30 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSIVNY-QCPRQKNCVVDRVNRNRCQYCRLK 88
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGH 109
KC+ +GMS+ ++GR S K ++++ + +Q E LG+
Sbjct: 89 KCIELGMSRDAVKFGRMSK--KQREKVEDEVRMHKQLAEANGLGY 131
>gi|130490232|ref|NP_001076325.1| nuclear receptor ROR-beta [Danio rerio]
gi|126508455|gb|ABO15413.1| retinoid-related orphan receptor b [Danio rerio]
Length = 466
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|47523524|ref|NP_999385.1| estrogen receptor [Sus scrofa]
gi|2500908|sp|Q29040.1|ESR1_PIG RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha;
AltName: Full=Estradiol receptor; AltName: Full=Nuclear
receptor subfamily 3 group A member 1
gi|587555|emb|CAA85524.1| estradiol receptor [Sus scrofa]
Length = 595
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/104 (41%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLG 108
KC VGM K G R RR H + Q+ E + E G
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRNEAVPPG 284
>gi|41055082|ref|NP_957361.1| RAR-related orphan receptor A, paralog b [Danio rerio]
gi|29881662|gb|AAH51158.1| RAR-related orphan receptor A, paralog b [Danio rerio]
Length = 474
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF S S S C C+I++ +R C+ CRL+
Sbjct: 17 CKICGDKSSGIHYGVITCEGCKGFFRGSQQGTVSYS-CPRQKSCLIDRTSRNRCQHCRLQ 75
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERT 105
KCL VGMS+ ++GR S + + Q+ + +QQ ++T
Sbjct: 76 KCLAVGMSRDAVKFGRMSKKQRDSLFAEVQKHRQQQQDDKT 116
>gi|68132032|gb|AAY85282.1| RORgamma-A [Danio rerio]
Length = 375
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N ++ C CII++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQN-NAMYSCSRQRNCIIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRSNWFK--IHCLLQEQQQQAEQ 100
KCL +GMS+ ++GR S + ++ +Q+ QQ E+
Sbjct: 69 KCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQER 106
>gi|224088946|ref|XP_002190992.1| PREDICTED: nuclear receptor ROR-beta [Taeniopygia guttata]
Length = 458
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|216409698|dbj|BAH02286.1| retinoid-related orphan receptor beta [Homo sapiens]
Length = 459
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|164633022|gb|ABY64724.1| estrogen receptor alpha [Ateles paniscus]
Length = 595
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/104 (41%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLG 108
KC VGM K G R RR H + Q+ E + E G
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRNEVGSTG 284
>gi|45384158|ref|NP_990424.1| nuclear receptor ROR-beta [Gallus gallus]
gi|1619285|emb|CAA69928.1| nuclear orphan receptor ROR-beta [Gallus gallus]
Length = 459
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|351714484|gb|EHB17403.1| Nuclear receptor ROR-beta [Heterocephalus glaber]
Length = 510
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 21 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 79
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 80 KCLALGMSRDAVKFGRMS 97
>gi|390462190|ref|XP_003732811.1| PREDICTED: estrogen receptor isoform 2 [Callithrix jacchus]
Length = 595
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/104 (41%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLG 108
KC VGM K G R RR H + Q+ E + E G
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRNEVGSTG 284
>gi|349096|gb|AAA42095.1| transcription factor, partial [Rattus norvegicus]
Length = 483
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 34 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 92
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 93 KCLALGMSRDAVKFGRMS 110
>gi|395850709|ref|XP_003797919.1| PREDICTED: estrogen receptor [Otolemur garnettii]
Length = 595
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRNE 279
>gi|339241333|ref|XP_003376592.1| nuclear hormone receptor E75 [Trichinella spiralis]
gi|316974682|gb|EFV58163.1| nuclear hormone receptor E75 [Trichinella spiralis]
Length = 534
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 7/125 (5%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+G+H+G +CEGCK FF RS C + +C++ + NR C+ CR +
Sbjct: 111 CKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEY-RCLRDGKCLVYRLNRNRCQYCRFK 169
Query: 65 KCLMVGMSKSGSRYGRRSNWFK------IHCLLQEQQQQAEQQTERTKLGHPDLLLKLDK 118
KCL VGMS+ RYGR + + + + + + E+ +L D++L + +
Sbjct: 170 KCLAVGMSRDSVRYGRVPKRSRDRMQEDVRVTSMTGESEVDNEVEKHQLALYDIILSVSQ 229
Query: 119 FTNNN 123
++N
Sbjct: 230 AHHSN 234
>gi|348572976|ref|XP_003472268.1| PREDICTED: nuclear receptor ROR-beta-like [Cavia porcellus]
Length = 470
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 21 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 79
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 80 KCLALGMSRDAVKFGRMS 97
>gi|344271210|ref|XP_003407434.1| PREDICTED: nuclear receptor ROR-beta, partial [Loxodonta
africana]
Length = 458
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 9 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 67
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 68 KCLALGMSRDAVKFGRMS 85
>gi|296189722|ref|XP_002742890.1| PREDICTED: nuclear receptor ROR-beta [Callithrix jacchus]
Length = 459
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|291383385|ref|XP_002708255.1| PREDICTED: RAR-related orphan receptor B [Oryctolagus cuniculus]
Length = 459
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|431898686|gb|ELK07066.1| Nuclear receptor ROR-beta, partial [Pteropus alecto]
Length = 460
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 11 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 69
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 70 KCLALGMSRDAVKFGRMS 87
>gi|400974222|ref|NP_001257887.1| nuclear receptor ROR-beta [Rattus norvegicus]
gi|109463688|ref|XP_001079696.1| PREDICTED: nuclear receptor ROR-beta isoform 1 [Rattus
norvegicus]
Length = 459
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|86560908|ref|NP_001032969.1| Protein NHR-23, isoform d [Caenorhabditis elegans]
gi|74834666|emb|CAJ30218.1| Protein NHR-23, isoform d [Caenorhabditis elegans]
Length = 439
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 63/99 (63%), Gaps = 10/99 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C C++++ NR C+ CRL+
Sbjct: 12 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSIVNY-QCPRQKNCVVDRVNRNRCQYCRLK 70
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC+ +GMS+ ++GR S ++Q+++ E + +
Sbjct: 71 KCIELGMSRDAVKFGRMS---------KKQREKVEDEVQ 100
>gi|395819239|ref|XP_003783005.1| PREDICTED: nuclear receptor ROR-beta [Otolemur garnettii]
Length = 459
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|334333054|ref|XP_001372755.2| PREDICTED: nuclear receptor ROR-beta [Monodelphis domestica]
Length = 505
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 76 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 134
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 135 KCLALGMSRDAVKFGRMS 152
>gi|19743907|ref|NP_008845.2| nuclear receptor ROR-beta [Homo sapiens]
gi|386781838|ref|NP_001247680.1| nuclear receptor ROR-beta [Macaca mulatta]
gi|114625038|ref|XP_001144112.1| PREDICTED: nuclear receptor ROR-beta isoform 1 [Pan troglodytes]
gi|397503245|ref|XP_003822240.1| PREDICTED: nuclear receptor ROR-beta [Pan paniscus]
gi|402897652|ref|XP_003911863.1| PREDICTED: nuclear receptor ROR-beta [Papio anubis]
gi|426362023|ref|XP_004048182.1| PREDICTED: nuclear receptor ROR-beta isoform 1 [Gorilla gorilla
gorilla]
gi|62022574|gb|AAH51830.1| RAR-related orphan receptor B [Homo sapiens]
gi|62739507|gb|AAH93774.1| RAR-related orphan receptor B [Homo sapiens]
gi|62739746|gb|AAH93772.1| RAR-related orphan receptor B [Homo sapiens]
gi|119582956|gb|EAW62552.1| RAR-related orphan receptor B [Homo sapiens]
gi|167773493|gb|ABZ92181.1| RAR-related orphan receptor B [synthetic construct]
gi|189066675|dbj|BAG36222.1| unnamed protein product [Homo sapiens]
gi|307685949|dbj|BAJ20905.1| RAR-related orphan receptor B [synthetic construct]
gi|325495575|gb|ADZ17393.1| RAR-related orphan receptor beta [Homo sapiens]
gi|380783487|gb|AFE63619.1| nuclear receptor ROR-beta [Macaca mulatta]
Length = 459
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|449269569|gb|EMC80331.1| Nuclear receptor ROR-beta, partial [Columba livia]
Length = 461
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 12 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 70
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 71 KCLALGMSRDAVKFGRMS 88
>gi|124028632|sp|P45446.3|RORB_RAT RecName: Full=Nuclear receptor ROR-beta; AltName: Full=Nuclear
receptor RZR-beta; AltName: Full=Nuclear receptor
subfamily 1 group F member 2; AltName:
Full=Retinoid-related orphan receptor-beta
Length = 470
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 21 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 79
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 80 KCLALGMSRDAVKFGRMS 97
>gi|114625040|ref|XP_528326.2| PREDICTED: nuclear receptor ROR-beta isoform 2 [Pan troglodytes]
gi|403256470|ref|XP_003920899.1| PREDICTED: nuclear receptor ROR-beta [Saimiri boliviensis
boliviensis]
gi|426362025|ref|XP_004048183.1| PREDICTED: nuclear receptor ROR-beta isoform 2 [Gorilla gorilla
gorilla]
gi|124028630|sp|Q92753.3|RORB_HUMAN RecName: Full=Nuclear receptor ROR-beta; AltName: Full=Nuclear
receptor RZR-beta; AltName: Full=Nuclear receptor
subfamily 1 group F member 2; AltName:
Full=Retinoid-related orphan receptor-beta
gi|355567837|gb|EHH24178.1| Retinoid-related orphan receptor-beta [Macaca mulatta]
gi|355753418|gb|EHH57464.1| Retinoid-related orphan receptor-beta [Macaca fascicularis]
Length = 470
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 21 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 79
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 80 KCLALGMSRDAVKFGRMS 97
>gi|194224754|ref|XP_001488198.2| PREDICTED: nuclear receptor ROR-beta [Equus caballus]
Length = 459
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|149062564|gb|EDM12987.1| RAR-related orphan receptor beta (predicted) [Rattus norvegicus]
Length = 452
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 21 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 79
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 80 KCLALGMSRDAVKFGRMS 97
>gi|300798568|ref|NP_001179587.1| nuclear receptor ROR-beta [Bos taurus]
gi|296484753|tpg|DAA26868.1| TPA: RAR-related orphan receptor B [Bos taurus]
Length = 459
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|395530718|ref|XP_003767435.1| PREDICTED: retinoic acid receptor RXR-gamma [Sarcophilus harrisii]
Length = 470
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 12/108 (11%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+ CR +
Sbjct: 146 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQYCRYQ 204
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
KCL++GM + + R Q ++++E + E T GH D+
Sbjct: 205 KCLVMGMKREAVQEER-----------QRSRERSENEVESTSSGHEDM 241
>gi|348526994|ref|XP_003451004.1| PREDICTED: nuclear receptor ROR-alpha-like [Oreochromis niloticus]
Length = 493
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSIS-ECKNNNECIINKKNRTSCKSCRL 63
CK+CG+ ++G H+G TCEGCK FF RS LP++S C + C I++ +R C+ CRL
Sbjct: 25 CKICGDKSSGVHYGVITCEGCKGFFRRS--QLPTVSYSCSRQSNCQIDRASRNRCQHCRL 82
Query: 64 RKCLMVGMSKSGSRYGRRS 82
+KCL GMS+ ++GR S
Sbjct: 83 QKCLAQGMSRDAVKFGRMS 101
>gi|134270863|gb|ABO69006.1| peroxisome proliferator-activated receptor alpha [Dentex dentex]
Length = 477
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VC + A+GFH+G CEGCK FF R+ +C+ N C I KKNR C+
Sbjct: 88 LNLECRVCSDKASGFHYGVHACEGCKGFFRRTIRLKLEYDKCERN--CKIQKKNRNKCQY 145
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDLLLK 115
CR KCL VGMS + R+GR K+ L+ +++ E++ L +L++
Sbjct: 146 CRFHKCLSVGMSHNAIRFGRMPQAEKLK--LKAERKVVEKEVAGPMLADHKILVR 198
>gi|345323218|ref|XP_001506671.2| PREDICTED: nuclear receptor ROR-beta [Ornithorhynchus anatinus]
Length = 688
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 239 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 297
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 298 KCLALGMSRDAVKFGRMS 315
>gi|327263554|ref|XP_003216584.1| PREDICTED: nuclear receptor ROR-beta-like [Anolis carolinensis]
Length = 540
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 91 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 149
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 150 KCLALGMSRDAVKFGRMS 167
>gi|332236552|ref|XP_003267464.1| PREDICTED: nuclear receptor ROR-beta [Nomascus leucogenys]
Length = 459
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|148709623|gb|EDL41569.1| RAR-related orphan receptor beta, isoform CRA_a [Mus musculus]
Length = 474
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 25 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 83
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 84 KCLALGMSRDAVKFGRMS 101
>gi|1619294|emb|CAA69929.1| nuclear orphan receptor ROR-beta [Homo sapiens]
Length = 459
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|293344662|ref|XP_002725756.1| PREDICTED: nuclear receptor ROR-beta isoform 2 [Rattus
norvegicus]
gi|293356460|ref|XP_002728915.1| PREDICTED: nuclear receptor ROR-beta isoform 1 [Rattus
norvegicus]
Length = 470
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 21 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 79
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 80 KCLALGMSRDAVKFGRMS 97
>gi|126352536|ref|NP_001075241.1| estrogen receptor [Equus caballus]
gi|12230056|sp|Q9TV98.1|ESR1_HORSE RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha;
AltName: Full=Estradiol receptor; AltName: Full=Nuclear
receptor subfamily 3 group A member 1
gi|4325290|gb|AAD17316.1| estrogen receptor alpha [Equus caballus]
Length = 594
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRNE 279
>gi|112821700|ref|NP_001036819.1| nuclear receptor ROR-beta isoform 1 [Mus musculus]
gi|110589523|gb|ABG77269.1| retinoid-related orphan receptor beta 1 isoform [Mus musculus]
Length = 459
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|37194675|gb|AAH58269.1| Rorb protein, partial [Mus musculus]
Length = 462
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 13 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 71
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 72 KCLALGMSRDAVKFGRMS 89
>gi|301621480|ref|XP_002940077.1| PREDICTED: nuclear receptor ROR-beta-like [Xenopus (Silurana)
tropicalis]
Length = 458
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|73946789|ref|XP_541280.2| PREDICTED: nuclear receptor ROR-beta [Canis lupus familiaris]
Length = 459
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|164633018|gb|ABY64722.1| estrogen receptor alpha [Colobus guereza]
Length = 595
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRGE 279
>gi|332825283|ref|XP_003311596.1| PREDICTED: estrogen receptor isoform 1 [Pan troglodytes]
gi|332825285|ref|XP_003311597.1| PREDICTED: estrogen receptor isoform 2 [Pan troglodytes]
gi|332825287|ref|XP_003311598.1| PREDICTED: estrogen receptor isoform 3 [Pan troglodytes]
gi|164633008|gb|ABY64717.1| estrogen receptor alpha [Gorilla gorilla]
Length = 595
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRGE 279
>gi|109072322|ref|XP_001097228.1| PREDICTED: estrogen receptor isoform 1 [Macaca mulatta]
gi|297291506|ref|XP_002803904.1| PREDICTED: estrogen receptor isoform 2 [Macaca mulatta]
gi|355561971|gb|EHH18603.1| hypothetical protein EGK_15246 [Macaca mulatta]
gi|355748817|gb|EHH53300.1| hypothetical protein EGM_13911 [Macaca fascicularis]
Length = 595
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRGE 279
>gi|47228739|emb|CAG07471.1| unnamed protein product [Tetraodon nigroviridis]
Length = 463
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF R+ C + C I KKNR C+ CR +
Sbjct: 30 CKVCGDKASGFHYGVHACEGCKGFFRRTVRMKLEYDRC--DRSCKIQKKNRNKCQYCRFQ 87
Query: 65 KCLMVGMSKSGSRYGR 80
KCL +GMS RYGR
Sbjct: 88 KCLSLGMSHDAIRYGR 103
>gi|94467591|dbj|BAE93688.1| RAR related orphan receptor beta [Mus musculus]
Length = 459
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|332213652|ref|XP_003255939.1| PREDICTED: estrogen receptor isoform 1 [Nomascus leucogenys]
gi|332213654|ref|XP_003255940.1| PREDICTED: estrogen receptor isoform 2 [Nomascus leucogenys]
gi|332213656|ref|XP_003255941.1| PREDICTED: estrogen receptor isoform 3 [Nomascus leucogenys]
Length = 595
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRGE 279
>gi|164633020|gb|ABY64723.1| estrogen receptor alpha [Trachypithecus obscurus]
Length = 595
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRGE 279
>gi|164633016|gb|ABY64721.1| estrogen receptor alpha [Chlorocebus aethiops]
Length = 595
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRGE 279
>gi|257196153|ref|NP_001158059.1| estrogen receptor [Papio anubis]
gi|164633014|gb|ABY64720.1| estrogen receptor alpha [Papio anubis]
Length = 595
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRGE 279
>gi|297679441|ref|XP_002817538.1| PREDICTED: estrogen receptor isoform 1 [Pongo abelii]
gi|297679443|ref|XP_002817539.1| PREDICTED: estrogen receptor isoform 2 [Pongo abelii]
gi|395737869|ref|XP_003776993.1| PREDICTED: estrogen receptor [Pongo abelii]
gi|164633010|gb|ABY64718.1| estrogen receptor alpha [Pongo pygmaeus]
Length = 595
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRGE 279
>gi|71980510|ref|NP_001020977.1| Protein NHR-23, isoform c [Caenorhabditis elegans]
gi|58081756|emb|CAI46548.1| Protein NHR-23, isoform c [Caenorhabditis elegans]
Length = 437
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/78 (43%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C C++++ NR C+ CRL+
Sbjct: 12 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSIVNY-QCPRQKNCVVDRVNRNRCQYCRLK 70
Query: 65 KCLMVGMSKSGSRYGRRS 82
KC+ +GMS+ ++GR S
Sbjct: 71 KCIELGMSRDAVKFGRMS 88
>gi|410978155|ref|XP_003995462.1| PREDICTED: nuclear receptor ROR-beta [Felis catus]
Length = 459
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|395514963|ref|XP_003761678.1| PREDICTED: nuclear receptor ROR-beta [Sarcophilus harrisii]
Length = 487
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 38 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 96
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 97 KCLALGMSRDAVKFGRMS 114
>gi|112821692|ref|NP_666207.3| nuclear receptor ROR-beta isoform 2 [Mus musculus]
gi|124028631|sp|Q8R1B8.3|RORB_MOUSE RecName: Full=Nuclear receptor ROR-beta; AltName: Full=Nuclear
receptor RZR-beta; AltName: Full=Nuclear receptor
subfamily 1 group F member 2; AltName:
Full=Retinoid-related orphan receptor-beta
gi|110589525|gb|ABG77270.1| retinoid-related orphan receptor beta 2 isoform [Mus musculus]
Length = 470
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 21 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 79
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 80 KCLALGMSRDAVKFGRMS 97
>gi|281344010|gb|EFB19594.1| hypothetical protein PANDA_014042 [Ailuropoda melanoleuca]
Length = 459
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|88595436|gb|AAW88550.2| nuclear receptor 2DBD-gamma [Schistosoma mansoni]
Length = 1861
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSIS-ECKNNNECIINKKNRTSCKSCRL 63
C+VCG ++GFHFGA TCEGCK FF R+ N S C+N C + R +CKSCR
Sbjct: 479 CRVCGAKSSGFHFGAITCEGCKGFFRRTINERESQRYTCRNGGNCAVTGATRNNCKSCRY 538
Query: 64 RKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
R+CL VGMSK + N K C ++ +Q
Sbjct: 539 RRCLAVGMSKHAVVSALQPNAIKHRCAVEIEQ 570
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSY--NNLPSISECKNNNECIINKKNRTSCKSCR 62
C +CG+ AAGFH A+ CE CK FF RS N + C +N C INK RT C+ CR
Sbjct: 394 CDICGDVAAGFHCNAYVCEACKKFFIRSSKGENFTKYT-CTKSNTCEINKDTRTHCQRCR 452
Query: 63 LRKCLMVGMSKSGSRYGRRSNWFKIHC 89
+KC+ +GM G+ ++ +I C
Sbjct: 453 YQKCIRLGMVLPGAAVFPVTDISEIPC 479
>gi|193211376|ref|NP_001123209.1| nuclear receptor ROR-beta [Ovis aries]
gi|152940827|gb|ABS44878.1| retinoid-related orphan receptor beta [Ovis aries]
Length = 459
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|440912616|gb|ELR62171.1| Nuclear receptor ROR-beta, partial [Bos grunniens mutus]
Length = 467
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 18 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 76
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 77 KCLALGMSRDAVKFGRMS 94
>gi|281343435|gb|EFB19019.1| hypothetical protein PANDA_009027 [Ailuropoda melanoleuca]
Length = 580
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 170 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 228
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 229 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRNE 264
>gi|429330061|gb|ADH95692.2| peroxisome proliferator activated receptor gamma [Megalobrama
amblycephala]
Length = 510
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VCG+ A+GFH+G CEGCK FF R+ C + C I+KK+R C+
Sbjct: 134 LNIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLVYDHC--DLHCRIHKKSRNKCQY 191
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCLMVGMS + R+GR
Sbjct: 192 CRFQKCLMVGMSHNAIRFGR 211
>gi|374091626|gb|AEY83591.1| estrogen receptor alpha [Rhinoceros unicornis]
Length = 573
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 163 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 221
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 222 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRNE 257
>gi|164633024|gb|ABY64725.1| estrogen receptor alpha [Cebus apella]
Length = 595
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/104 (41%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLG 108
KC VGM K G R RR H + Q+ E + E G
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRNEVGSTG 284
>gi|164633012|gb|ABY64719.1| estrogen receptor alpha [Hylobates lar]
Length = 595
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRGE 279
>gi|158266364|gb|ABW24738.1| estrogen receptor alpha [Pleurodeles waltl]
Length = 582
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CE CK+FF RS C N+C I+K R SC++CRLR
Sbjct: 178 CAVCSDYASGYHYGVWSCEDCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 236
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q++ +Q+ E
Sbjct: 237 KCYEVGMMKGGIRKDRRGGRLIKH---KRQKEDTDQKLE 272
>gi|207091397|gb|ACI23369.1| estrogen receptor [Chrysemys picta]
Length = 588
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 63/111 (56%), Gaps = 7/111 (6%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 179 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 234
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
RLRKC VGM K G R RR H +E+Q T T++ P L
Sbjct: 235 RLRKCYEVGMMKGGIRKDRRGGRMLKHKRQREEQDARIAGTSSTEMRTPTL 285
>gi|31234|emb|CAA27284.1| oestrogen receptor [Homo sapiens]
gi|182193|gb|AAA52399.1| estrogen receptor [Homo sapiens]
gi|216409734|dbj|BAH02304.1| estrogen receptor 1 [Homo sapiens]
gi|224957|prf||1204262A estrogen receptor
Length = 595
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRGE 279
>gi|374091622|gb|AEY83589.1| estrogen receptor alpha [Ceratotherium simum simum]
Length = 574
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 164 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 222
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 223 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRNE 258
>gi|410919461|ref|XP_003973203.1| PREDICTED: nuclear receptor subfamily 1 group D member 2-like
[Takifugu rubripes]
Length = 562
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 48/76 (63%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N +C+I + NR C+ CR +
Sbjct: 119 CKVCGDIASGFHYGVHACEGCKGFFRRSIQQNIHYKMCVKNEKCLIMRMNRNRCQHCRFK 178
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 179 KCLAVGMSRDAVRFGR 194
>gi|124015060|gb|ABM88718.1| estrogen receptor alpha [Sus scrofa]
Length = 595
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF R C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRGIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLG 108
KC VGM+K G R RR H + Q+ E + E G
Sbjct: 244 KCYEVGMTKGGIRKDRRGGRMLKH---KRQRDDGEGRNEAVPPG 284
>gi|383872390|ref|NP_001244539.1| retinoic acid receptor RXR-gamma [Macaca mulatta]
gi|355558991|gb|EHH15771.1| hypothetical protein EGK_01907 [Macaca mulatta]
gi|355746155|gb|EHH50780.1| hypothetical protein EGM_01657 [Macaca fascicularis]
gi|380815424|gb|AFE79586.1| retinoic acid receptor RXR-gamma isoform a [Macaca mulatta]
Length = 463
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECASSGHEDM 234
>gi|301778497|ref|XP_002924666.1| PREDICTED: nuclear receptor ROR-beta-like [Ailuropoda melanoleuca]
Length = 478
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 29 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 87
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 88 KCLALGMSRDAVKFGRMS 105
>gi|345323708|ref|XP_001509051.2| PREDICTED: nuclear receptor subfamily 1 group D member 2-like
[Ornithorhynchus anatinus]
Length = 699
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 216 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 275
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 276 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 305
>gi|297684595|ref|XP_002819914.1| PREDICTED: nuclear receptor ROR-beta [Pongo abelii]
Length = 464
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|61367423|gb|AAX42995.1| estrogen receptor 1 [synthetic construct]
Length = 596
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRGE 279
>gi|397480550|ref|XP_003811543.1| PREDICTED: estrogen receptor isoform 1 [Pan paniscus]
gi|397480552|ref|XP_003811544.1| PREDICTED: estrogen receptor isoform 2 [Pan paniscus]
gi|397480554|ref|XP_003811545.1| PREDICTED: estrogen receptor isoform 3 [Pan paniscus]
gi|164633006|gb|ABY64716.1| estrogen receptor alpha [Pan paniscus]
Length = 595
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRGE 279
>gi|348501378|ref|XP_003438247.1| PREDICTED: nuclear receptor ROR-beta-like [Oreochromis niloticus]
Length = 499
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N ++ C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQN-NAMYSCSRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQ 101
KCL +GMS+ ++GR S + + Q+ Q Q+
Sbjct: 69 KCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQKSQE 105
>gi|410921372|ref|XP_003974157.1| PREDICTED: nuclear receptor ROR-beta-like [Takifugu rubripes]
Length = 499
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N ++ C C+I++ NR C+ CRL+
Sbjct: 36 CKICGDKSSGIHYGVITCEGCKGFFRRSQQN-NAMYSCSRQRNCLIDRTNRNRCQHCRLQ 94
Query: 65 KCLMVGMSKSGSRYGRRSNWFK--IHCLLQEQQQQAEQQTERTKLGHPDL 112
KCL +GMS+ ++GR S + ++ +Q+ QQ E T+ DL
Sbjct: 95 KCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQECAVHGTREESVDL 144
>gi|62821794|ref|NP_000116.2| estrogen receptor [Homo sapiens]
gi|170295800|ref|NP_001116212.1| estrogen receptor [Homo sapiens]
gi|170295802|ref|NP_001116213.1| estrogen receptor [Homo sapiens]
gi|170295804|ref|NP_001116214.1| estrogen receptor [Homo sapiens]
gi|544257|sp|P03372.2|ESR1_HUMAN RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha;
AltName: Full=Estradiol receptor; AltName: Full=Nuclear
receptor subfamily 3 group A member 1
gi|37499471|gb|AAQ91815.1| estrogen receptor 1 [Homo sapiens]
gi|60814879|gb|AAX36323.1| estrogen receptor 1 [synthetic construct]
gi|61357348|gb|AAX41375.1| estrogen receptor 1 [synthetic construct]
gi|118763947|gb|AAI28574.1| Estrogen receptor 1 [Homo sapiens]
gi|118764400|gb|AAI28575.1| Estrogen receptor 1 [Homo sapiens]
gi|119568125|gb|EAW47740.1| estrogen receptor 1, isoform CRA_a [Homo sapiens]
gi|306921463|dbj|BAJ17811.1| estrogen receptor 1 [synthetic construct]
gi|348019627|gb|AEP43755.1| estrogen nuclear receptor alpha [Homo sapiens]
Length = 595
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRGE 279
>gi|198282033|ref|NP_571542.1| peroxisome proliferator-activated receptor gamma [Danio rerio]
gi|113037610|gb|ABI30002.1| peroxisome proliferator activated receptor gamma [Danio rerio]
Length = 527
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VCG+ A+GFH+G CEGCK FF R+ C + C I+KK+R C+
Sbjct: 151 LNIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLVYDHC--DLHCRIHKKSRNKCQY 208
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCLMVGMS + R+GR
Sbjct: 209 CRFQKCLMVGMSHNAIRFGR 228
>gi|66910331|gb|AAH96929.1| Rorb protein [Danio rerio]
Length = 400
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|197101785|ref|NP_001124824.1| retinoic acid receptor RXR-gamma [Pongo abelii]
gi|402858038|ref|XP_003893537.1| PREDICTED: retinoic acid receptor RXR-gamma [Papio anubis]
gi|75062013|sp|Q5REL6.1|RXRG_PONAB RecName: Full=Retinoic acid receptor RXR-gamma; AltName:
Full=Nuclear receptor subfamily 2 group B member 3;
AltName: Full=Retinoid X receptor gamma
gi|55726030|emb|CAH89791.1| hypothetical protein [Pongo abelii]
Length = 463
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECASSGHEDM 234
>gi|348527674|ref|XP_003451344.1| PREDICTED: nuclear receptor ROR-beta-like [Oreochromis niloticus]
Length = 474
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N ++ C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQN-NAMYSCSRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQ 101
KCL +GMS+ ++GR S + + Q+ Q Q+
Sbjct: 69 KCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQE 105
>gi|1197855|gb|AAB00115.1| 80 kDa estrogen receptor [Homo sapiens]
Length = 701
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRGE 279
>gi|397511708|ref|XP_003826209.1| PREDICTED: nuclear receptor subfamily 1 group D member 2 [Pan
paniscus]
Length = 504
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 28 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 87
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 88 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 117
>gi|313240854|emb|CBY33143.1| unnamed protein product [Oikopleura dioica]
Length = 619
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS N + C + C++++ NR C++CRL+
Sbjct: 42 CKVCGDRSSGIHYGIITCEGCKGFFRRSQQNNARYN-CPRSGTCVVDRTNRNRCQACRLK 100
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPD 111
KCL +GMS+ ++GR S + ++ + Q +Q +E + PD
Sbjct: 101 KCLGLGMSRDAVKFGRMSKKQRDQLYMEVVKHQNQQASEAQSM--PD 145
>gi|426332559|ref|XP_004027871.1| PREDICTED: retinoic acid receptor RXR-gamma [Gorilla gorilla
gorilla]
Length = 463
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECATSGHEDM 234
>gi|432115889|gb|ELK37034.1| Nuclear receptor subfamily 1 group D member 2 [Myotis davidii]
Length = 501
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 28 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 87
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 88 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 117
>gi|410971527|ref|XP_003992219.1| PREDICTED: nuclear receptor subfamily 1 group D member 2 [Felis
catus]
Length = 501
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 28 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 87
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 88 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 117
>gi|291278204|gb|ADD91583.1| estrogen receptor beta [Microtus ochrogaster]
Length = 515
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/95 (45%), Positives = 57/95 (60%), Gaps = 10/95 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 73 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 131
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHCL 90
KC VGM K GSR R RS+ ++HCL
Sbjct: 132 KCYEVGMVKCGSRRERCGYRIVRRQRSSGEQVHCL 166
>gi|395734078|ref|XP_002814054.2| PREDICTED: nuclear receptor subfamily 1 group D member 2 [Pongo
abelii]
Length = 504
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 28 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 87
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 88 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 117
>gi|338715053|ref|XP_001492528.3| PREDICTED: nuclear receptor subfamily 1 group D member 2 [Equus
caballus]
Length = 503
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 28 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 87
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 88 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 117
>gi|301791796|ref|XP_002930866.1| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor subfamily 1 group
D member 2-like [Ailuropoda melanoleuca]
Length = 576
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>gi|115394374|gb|ABI97119.1| estrogen receptor-like protein isoform variant 3 [Marisa
cornuarietis]
Length = 527
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C+VC + A+GFH+G ++CEGCK+FF RS P C N C I+K R SC++CR
Sbjct: 120 KLCQVCNDNASGFHYGVWSCEGCKAFFKRSIQG-PVDYMCPATNNCTIDKHRRKSCQACR 178
Query: 63 LRKCLMVGMSKSGSRYGRR 81
LRKC VGM+K R R+
Sbjct: 179 LRKCYEVGMNKGSQRKERK 197
>gi|301769791|ref|XP_002920319.1| PREDICTED: estrogen receptor-like [Ailuropoda melanoleuca]
Length = 526
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 116 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 174
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 175 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRNE 210
>gi|216409720|dbj|BAH02297.1| retinoid X receptor-gamma [Homo sapiens]
Length = 463
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECATSGHEDM 234
>gi|194440881|gb|ACF70732.1| peroxisome proliferator activated receptor gamma [Ctenopharyngodon
idella]
Length = 522
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VCG+ A+GFH+G CEGCK FF R+ C + C I+KK+R C+
Sbjct: 146 LNIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLVYDHC--DLHCRIHKKSRNKCRY 203
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCLMVGMS + R+GR
Sbjct: 204 CRFQKCLMVGMSHNAIRFGR 223
>gi|387861488|gb|AFK08624.1| peroxisome proliferator-activated receptor alpha [Scophthalmus
maximus]
Length = 474
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VC + A+GFH+G CEGCK FF R+ +C+ N C I KKNR C+ CR
Sbjct: 89 CRVCTDKASGFHYGVHACEGCKGFFRRTIRLKLEYDKCERN--CKIQKKNRNKCQYCRFH 146
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDLLLK 115
KCL VGMS + R+GR K+ L+ + + E + E L +L++
Sbjct: 147 KCLSVGMSHNAIRFGRMPQAEKLK--LKAESKMVEAEVESPMLADHKVLVR 195
>gi|281348874|gb|EFB24458.1| hypothetical protein PANDA_021476 [Ailuropoda melanoleuca]
Length = 571
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 98 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 157
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 158 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 187
>gi|224177493|ref|NP_001138897.1| nuclear receptor subfamily 1 group D member 2 isoform 2 [Homo
sapiens]
gi|426339690|ref|XP_004033776.1| PREDICTED: nuclear receptor subfamily 1 group D member 2 isoform 2
[Gorilla gorilla gorilla]
gi|119584745|gb|EAW64341.1| nuclear receptor subfamily 1, group D, member 2, isoform CRA_b
[Homo sapiens]
gi|194377964|dbj|BAG63345.1| unnamed protein product [Homo sapiens]
gi|325495473|gb|ADZ17342.1| nuclear receptor Rev-ErbA beta variant 2 [Homo sapiens]
Length = 504
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 28 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 87
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 88 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 117
>gi|395816616|ref|XP_003781794.1| PREDICTED: nuclear receptor subfamily 1 group D member 2 isoform 2
[Otolemur garnettii]
Length = 502
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 28 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 87
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 88 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 117
>gi|28279409|gb|AAH45613.1| Nuclear receptor subfamily 1, group D, member 2 [Homo sapiens]
Length = 579
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>gi|73989968|ref|XP_542763.2| PREDICTED: nuclear receptor subfamily 1 group D member 2 isoform 1
[Canis lupus familiaris]
Length = 576
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>gi|26347753|dbj|BAC37525.1| unnamed protein product [Mus musculus]
Length = 576
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>gi|5902068|ref|NP_008848.1| retinoic acid receptor RXR-gamma isoform a [Homo sapiens]
gi|114561087|ref|XP_513962.2| PREDICTED: retinoic acid receptor RXR-gamma isoform 2 [Pan
troglodytes]
gi|397508368|ref|XP_003824630.1| PREDICTED: retinoic acid receptor RXR-gamma [Pan paniscus]
gi|1350913|sp|P48443.1|RXRG_HUMAN RecName: Full=Retinoic acid receptor RXR-gamma; AltName:
Full=Nuclear receptor subfamily 2 group B member 3;
AltName: Full=Retinoid X receptor gamma
gi|1053069|gb|AAA80681.1| retinoid X receptor-gamma [Homo sapiens]
gi|15082315|gb|AAH12063.1| Retinoid X receptor, gamma [Homo sapiens]
gi|48145527|emb|CAG32986.1| RXRG [Homo sapiens]
gi|119611151|gb|EAW90745.1| retinoid X receptor, gamma [Homo sapiens]
gi|190689913|gb|ACE86731.1| retinoid X receptor, gamma protein [synthetic construct]
gi|190691285|gb|ACE87417.1| retinoid X receptor, gamma protein [synthetic construct]
gi|261858858|dbj|BAI45951.1| retinoid X receptor, gamma [synthetic construct]
gi|325495501|gb|ADZ17356.1| retinoid X nuclear receptor gamma variant 1 [Homo sapiens]
gi|326205168|dbj|BAJ83970.1| retinoic acid receptor RXR-gamma [Homo sapiens]
Length = 463
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECATSGHEDM 234
>gi|395816614|ref|XP_003781793.1| PREDICTED: nuclear receptor subfamily 1 group D member 2 isoform 1
[Otolemur garnettii]
Length = 577
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>gi|332215364|ref|XP_003256813.1| PREDICTED: nuclear receptor subfamily 1 group D member 2 [Nomascus
leucogenys]
Length = 504
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 28 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 87
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 88 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 117
>gi|507211|gb|AAC52144.1| Rev-Erb-beta, partial [Mus musculus]
Length = 542
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 69 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 128
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 129 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 158
>gi|402861701|ref|XP_003895223.1| PREDICTED: nuclear receptor subfamily 1 group D member 2 isoform 2
[Papio anubis]
Length = 504
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 28 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 87
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 88 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 117
>gi|304434492|dbj|BAJ15425.1| estrogen receptor alpha [Trimeresurus flavoviridis]
Length = 586
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 41/98 (41%), Positives = 58/98 (59%), Gaps = 6/98 (6%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 177 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 235
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQT 102
KC VGM K G R RR +L+ ++Q+ E +
Sbjct: 236 KCYEVGMMKGGIRKDRRGGR-----ILKHKRQREEHDS 268
>gi|444511395|gb|ELV09860.1| Nuclear receptor subfamily 1 group D member 2 [Tupaia chinensis]
Length = 570
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 18 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 77
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 78 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 107
>gi|348509890|ref|XP_003442479.1| PREDICTED: nuclear receptor subfamily 1 group D member 1-like
[Oreochromis niloticus]
Length = 643
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 47/76 (61%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 153 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCVKNESCTIVRINRNRCQQCRFK 212
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 213 KCLSVGMSRDAVRFGR 228
>gi|167016572|sp|Q0GFF6.2|RXRG_PIG RecName: Full=Retinoic acid receptor RXR-gamma; AltName:
Full=Nuclear receptor subfamily 2 group B member 3;
AltName: Full=Retinoid X receptor gamma
Length = 463
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECASSGHEDM 234
>gi|48146985|emb|CAG33715.1| NR1D2 [Homo sapiens]
Length = 579
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>gi|60829127|gb|AAX36866.1| nuclear receptor subfamily 1 group D member 2 [synthetic construct]
gi|61368627|gb|AAX43212.1| nuclear receptor subfamily 1 group D member 2 [synthetic construct]
Length = 580
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>gi|224177491|ref|NP_005117.3| nuclear receptor subfamily 1 group D member 2 isoform 1 [Homo
sapiens]
gi|2116672|dbj|BAA20088.1| EAR-1r [Homo sapiens]
gi|168278146|dbj|BAG11051.1| orphan nuclear receptor NR1D2 [synthetic construct]
gi|189066703|dbj|BAG36250.1| unnamed protein product [Homo sapiens]
gi|325495471|gb|ADZ17341.1| nuclear receptor Rev-ErbA beta variant 1 [Homo sapiens]
Length = 579
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>gi|215274122|sp|Q14995.3|NR1D2_HUMAN RecName: Full=Nuclear receptor subfamily 1 group D member 2;
AltName: Full=Orphan nuclear hormone receptor BD73;
AltName: Full=Rev-erb-beta; AltName: Full=V-erbA-related
protein 1-related; Short=EAR-1R
Length = 579
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>gi|62087762|dbj|BAD92328.1| orphan nuclear receptor NR1D2 variant [Homo sapiens]
Length = 549
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 72 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 131
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 132 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 161
>gi|410924429|ref|XP_003975684.1| PREDICTED: nuclear receptor ROR-beta-like [Takifugu rubripes]
Length = 527
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N ++ C C+I++ NR C+ CRL+
Sbjct: 35 CKICGDKSSGIHYGVITCEGCKGFFRRSQQN-NAMYSCSRQRNCLIDRTNRNRCQHCRLQ 93
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQ 101
KCL +GMS+ ++GR S + + Q+ Q Q+
Sbjct: 94 KCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQKSQE 130
>gi|348588919|ref|XP_003480212.1| PREDICTED: nuclear receptor subfamily 1 group D member 2-like
[Cavia porcellus]
Length = 580
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>gi|115495279|ref|NP_001068876.1| retinoic acid receptor RXR-gamma [Bos taurus]
gi|119367365|sp|Q0VC20.1|RXRG_BOVIN RecName: Full=Retinoic acid receptor RXR-gamma; AltName:
Full=Nuclear receptor subfamily 2 group B member 3;
AltName: Full=Retinoid X receptor gamma
gi|111305288|gb|AAI20392.1| Retinoid X receptor, gamma [Bos taurus]
gi|296489911|tpg|DAA32024.1| TPA: retinoic acid receptor RXR-gamma [Bos taurus]
Length = 463
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECANSGHEDM 234
>gi|357609788|gb|EHJ66672.1| ecdysone-induced protein 78C [Danaus plexippus]
Length = 452
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+G+H+G +CEGCK FF RS C + +C++ + NR C+ CR +
Sbjct: 55 CKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEY-RCLRDGKCLVIRLNRNRCQFCRFK 113
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ RYGR
Sbjct: 114 KCLAVGMSRDSVRYGR 129
>gi|211926880|dbj|BAG82653.1| estrogen receptor alpha [Atractosteus tropicus]
Length = 581
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 188 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 246
Query: 65 KCLMVGMSKSGSRYGRR 81
KC VGM K G R RR
Sbjct: 247 KCYEVGMMKGGVRKDRR 263
>gi|254553267|ref|NP_035714.3| nuclear receptor subfamily 1 group D member 2 [Mus musculus]
gi|6166581|sp|Q60674.1|NR1D2_MOUSE RecName: Full=Nuclear receptor subfamily 1 group D member 2;
AltName: Full=Orphan nuclear receptor RVR; AltName:
Full=Rev-erb-beta
gi|537290|gb|AAA79513.1| RVR [Mus musculus]
gi|66396497|gb|AAH96461.1| Nuclear receptor subfamily 1, group D, member 2 [Mus musculus]
gi|148688703|gb|EDL20650.1| nuclear receptor subfamily 1, group D, member 2, isoform CRA_b [Mus
musculus]
Length = 576
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>gi|426339688|ref|XP_004033775.1| PREDICTED: nuclear receptor subfamily 1 group D member 2 isoform 1
[Gorilla gorilla gorilla]
Length = 579
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>gi|216409694|dbj|BAH02284.1| nuclear receptor subfamily 1, group D, member 2 [Homo sapiens]
Length = 579
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>gi|194332487|ref|NP_001123685.1| retinoic acid receptor RXR-gamma [Sus scrofa]
gi|112820329|gb|ABI24018.1| retinoid X receptor gamma [Sus scrofa]
Length = 463
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECASSGHEDM 234
>gi|431919409|gb|ELK17928.1| Nuclear receptor subfamily 1 group D member 2 [Pteropus alecto]
Length = 591
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 116 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 175
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 176 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 205
>gi|114585699|ref|XP_516330.2| PREDICTED: nuclear receptor subfamily 1 group D member 2 isoform 2
[Pan troglodytes]
gi|410213864|gb|JAA04151.1| nuclear receptor subfamily 1, group D, member 2 [Pan troglodytes]
gi|410255500|gb|JAA15717.1| nuclear receptor subfamily 1, group D, member 2 [Pan troglodytes]
gi|410293036|gb|JAA25118.1| nuclear receptor subfamily 1, group D, member 2 [Pan troglodytes]
gi|410355045|gb|JAA44126.1| nuclear receptor subfamily 1, group D, member 2 [Pan troglodytes]
Length = 579
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>gi|47228363|emb|CAG07758.1| unnamed protein product [Tetraodon nigroviridis]
Length = 547
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N ++ C C+I++ NR C+ CRL+
Sbjct: 8 CKICGDKSSGIHYGVITCEGCKGFFRRSQQN-NAMYSCSRQRNCLIDRTNRNRCQHCRLQ 66
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQ 101
KCL +GMS+ ++GR S + + Q+ Q Q+
Sbjct: 67 KCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQKSQE 103
>gi|417411933|gb|JAA52385.1| Putative nuclear receptor subfamily protein 1 group d member 2
isoform 1, partial [Desmodus rotundus]
Length = 612
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 138 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 197
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 198 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 227
>gi|288558021|ref|NP_001083084.2| estrogen receptor 1 [Xenopus laevis]
gi|187856984|dbj|BAG31992.1| brain estrogen receptor alpha1 [Xenopus laevis]
Length = 585
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 10/102 (9%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 179 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 234
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
RLRKC VGM K G R RR H ++Q+++ EQ+ +
Sbjct: 235 RLRKCYEVGMMKGGIRKDRRGGRMLKH---KQQKEEPEQKND 273
>gi|355560069|gb|EHH16797.1| hypothetical protein EGK_12145, partial [Macaca mulatta]
gi|355747100|gb|EHH51714.1| hypothetical protein EGM_11146, partial [Macaca fascicularis]
Length = 574
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 98 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 157
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 158 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 187
>gi|344286664|ref|XP_003415077.1| PREDICTED: retinoic acid receptor RXR-gamma-like [Loxodonta
africana]
Length = 489
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 161 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 219
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 220 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAESASNGHEDM 260
>gi|471081|gb|AAA65937.1| orphan nuclear hormone receptor BD73, partial [Homo sapiens]
Length = 579
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 102 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 161
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 162 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 191
>gi|332816245|ref|XP_003309702.1| PREDICTED: nuclear receptor subfamily 1 group D member 2 isoform 1
[Pan troglodytes]
Length = 504
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 28 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 87
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 88 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 117
>gi|402861699|ref|XP_003895222.1| PREDICTED: nuclear receptor subfamily 1 group D member 2 isoform 1
[Papio anubis]
Length = 579
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>gi|380788235|gb|AFE65993.1| nuclear receptor subfamily 1 group D member 2 isoform 1 [Macaca
mulatta]
gi|383409825|gb|AFH28126.1| nuclear receptor subfamily 1 group D member 2 isoform 1 [Macaca
mulatta]
Length = 579
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>gi|296228212|ref|XP_002759745.1| PREDICTED: nuclear receptor subfamily 1 group D member 2
[Callithrix jacchus]
Length = 584
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 108 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 167
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 168 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 197
>gi|351705192|gb|EHB08111.1| Nuclear receptor subfamily 1 group D member 2, partial
[Heterocephalus glaber]
Length = 574
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 98 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 157
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 158 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 187
>gi|148226871|ref|NP_001085940.1| nuclear receptor subfamily 1, group D, member 1 [Xenopus laevis]
gi|49115842|gb|AAH73584.1| MGC82865 protein [Xenopus laevis]
gi|49119474|gb|AAH73572.1| MGC82865 protein [Xenopus laevis]
Length = 519
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 47/76 (61%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR R
Sbjct: 115 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNETCSIVRINRNRCQQCRFR 174
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 175 KCLSVGMSRDAVRFGR 190
>gi|213623778|gb|AAI70207.1| Estrogen receptor alpha 2 [Xenopus laevis]
Length = 427
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 10/102 (9%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 21 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 76
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
RLRKC VGM K G R RR H ++Q+++ EQ+ +
Sbjct: 77 RLRKCYEVGMMKGGIRKDRRGGRMLKH---KQQKEEPEQKND 115
>gi|56121|emb|CAA43411.1| estrogen receeptor [Rattus norvegicus]
Length = 600
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 190 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 248
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 249 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDLEGRNE 284
>gi|15418805|gb|AAK52104.1| estrogen receptor alpha [Ovis aries]
Length = 431
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/104 (41%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 21 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 79
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLG 108
KC VGM K G R RR H + Q+ E + E G
Sbjct: 80 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRNEAVPSG 120
>gi|35396539|gb|AAQ84783.1| estrogen receptor alpha 2 [Xenopus laevis]
Length = 427
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 10/102 (9%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 21 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 76
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
RLRKC VGM K G R RR H ++Q+++ EQ+ +
Sbjct: 77 RLRKCYEVGMMKGGIRKDRRGGRMLKH---KQQKEEPEQKND 115
>gi|3041810|dbj|BAA25431.1| estrogen receptor beta 2 [Rattus norvegicus]
Length = 503
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/100 (43%), Positives = 60/100 (60%), Gaps = 10/100 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 104 CPVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 162
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHCLLQEQQ 95
KC VGM K GSR R RS+ ++HCL + ++
Sbjct: 163 KCYEVGMVKCGSRRERCGYRIVRRQRSSSEQVHCLSKAKR 202
>gi|350579326|ref|XP_003480585.1| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor ROR-beta-like
[Sus scrofa]
Length = 524
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 21 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 79
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 80 KCLALGMSRDAVKFGRMS 97
>gi|6978815|ref|NP_036821.1| estrogen receptor [Rattus norvegicus]
gi|119600|sp|P06211.1|ESR1_RAT RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha;
AltName: Full=Estradiol receptor; AltName: Full=Nuclear
receptor subfamily 3 group A member 1
gi|56111|emb|CAA68287.1| unnamed protein product [Rattus norvegicus]
Length = 600
Score = 86.3 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 190 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 248
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 249 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDLEGRNE 284
>gi|403272547|ref|XP_003928117.1| PREDICTED: retinoic acid receptor RXR-gamma [Saimiri boliviensis
boliviensis]
Length = 463
Score = 86.3 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECASSGHEDM 234
>gi|313228671|emb|CBY07463.1| unnamed protein product [Oikopleura dioica]
Length = 578
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS N + C + C++++ NR C++CRL+
Sbjct: 42 CKVCGDRSSGIHYGIITCEGCKGFFRRSQQNNARYN-CPRSGTCVVDRTNRNRCQACRLK 100
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPD 111
KCL +GMS+ ++GR S + ++ + Q +Q +E + PD
Sbjct: 101 KCLGLGMSRDAVKFGRMSKKQRDQLYMEVVKHQNQQASEAQSM--PD 145
>gi|149038523|gb|EDL92853.1| rCG41136, isoform CRA_a [Rattus norvegicus]
gi|149038524|gb|EDL92854.1| rCG41136, isoform CRA_a [Rattus norvegicus]
gi|149038525|gb|EDL92855.1| rCG41136, isoform CRA_a [Rattus norvegicus]
gi|149038527|gb|EDL92857.1| rCG41136, isoform CRA_a [Rattus norvegicus]
gi|149038528|gb|EDL92858.1| rCG41136, isoform CRA_a [Rattus norvegicus]
gi|262117988|dbj|BAI48013.1| estrogen receptor alpha [Rattus norvegicus]
Length = 600
Score = 86.3 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 190 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 248
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 249 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDLEGRNE 284
>gi|126324155|ref|XP_001369925.1| PREDICTED: nuclear receptor subfamily 2 group F member 6-like
[Monodelphis domestica]
Length = 732
Score = 86.3 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ ++G H+G FTCEGCKSFF RS S + C++N +C I++ +R C+ CRL+
Sbjct: 394 CVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYT-CRSNRDCQIDQHHRNQCQYCRLK 452
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K + GR
Sbjct: 453 KCFRVGMRKEAVQRGR 468
>gi|12230055|sp|Q9QZJ5.1|ESR1_MESAU RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha;
AltName: Full=Estradiol receptor; AltName: Full=Nuclear
receptor subfamily 3 group A member 1
gi|5834403|gb|AAD53956.1|AF181077_1 estrogen receptor alpha [Mesocricetus auratus]
Length = 595
Score = 86.3 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRR 81
KC VGM K G R RR
Sbjct: 244 KCYEVGMMKGGIRKDRR 260
>gi|2632169|emb|CAA05632.1| oestrogen receptor beta2 [Rattus norvegicus]
gi|2801693|gb|AAB97425.1| estrogen receptor beta2 [Rattus norvegicus]
Length = 503
Score = 86.3 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/100 (43%), Positives = 60/100 (60%), Gaps = 10/100 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 104 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 162
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHCLLQEQQ 95
KC VGM K GSR R RS+ ++HCL + ++
Sbjct: 163 KCYEVGMVKCGSRRERCGYRIVRRQRSSSEQVHCLSKAKR 202
>gi|405950647|gb|EKC18621.1| Putative nuclear hormone receptor HR3 [Crassostrea gigas]
Length = 685
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS P +C N C+I++ NR C+ CRL+
Sbjct: 67 CKVCGDKSSGVHYGIITCEGCKGFFRRSQAG-PVNYQCPRNKNCVIDRVNRNRCQFCRLQ 125
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 126 KCLALGMSRDAVKFGRMS 143
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS P +C N C+I++ NR C+ CRL+
Sbjct: 263 CKVCGDKSSGVHYGIITCEGCKGFFRRSQAG-PVNYQCPRNKNCVIDRVNRNRCQFCRLQ 321
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 322 KCLALGMSRDAVKFGRMS 339
>gi|354466928|ref|XP_003495923.1| PREDICTED: estrogen receptor [Cricetulus griseus]
Length = 595
Score = 86.3 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDLEGRNE 279
>gi|50882276|gb|AAT85613.1| peroxisome proliferator-activated receptor alpha [Sparus aurata]
Length = 477
Score = 86.3 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C++C + A+GFH+G CEGCK FF R+ +C+ N C I KKNR C+
Sbjct: 88 LNLECRICSDKASGFHYGVHACEGCKGFFRRTIRLRLEYDKCERN--CKIQKKNRNKCQY 145
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDLLLK 115
CR KCL VGMS + R+GR K+ L+ +++ E++ L +L++
Sbjct: 146 CRFHKCLSVGMSHNAIRFGRMPQAEKLK--LKAERKVVEKEVAGPMLADHKILVR 198
>gi|189532981|ref|XP_690743.3| PREDICTED: nuclear receptor ROR-beta [Danio rerio]
Length = 480
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N ++ C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQN-NAMYSCSRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|86560912|ref|NP_001032971.1| Protein NHR-23, isoform f [Caenorhabditis elegans]
gi|74834668|emb|CAJ30220.1| Protein NHR-23, isoform f [Caenorhabditis elegans]
Length = 555
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 63/99 (63%), Gaps = 10/99 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C C++++ NR C+ CRL+
Sbjct: 128 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSIVNY-QCPRQKNCVVDRVNRNRCQYCRLK 186
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC+ +GMS+ ++GR S ++Q+++ E + +
Sbjct: 187 KCIELGMSRDAVKFGRMS---------KKQREKVEDEVQ 216
>gi|440910600|gb|ELR60380.1| Retinoic acid receptor RXR-gamma, partial [Bos grunniens mutus]
Length = 447
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 119 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 177
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 178 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECANSGHEDM 218
>gi|194388386|dbj|BAG65577.1| unnamed protein product [Homo sapiens]
Length = 522
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 112 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 170
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 171 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRGE 206
>gi|2133484|pir||I45067 steroid hormone receptor family member CNR3 - Caenorhabditis
elegans
gi|538371|gb|AAA96983.1| steroid hormone receptor family member CHR3 [Caenorhabditis
elegans]
Length = 553
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/78 (43%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C C++++ NR C+ CRL+
Sbjct: 128 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSIVNY-QCPRQKNCVVDRVNRNRCQYCRLK 186
Query: 65 KCLMVGMSKSGSRYGRRS 82
KC+ +GMS+ ++GR S
Sbjct: 187 KCIELGMSRDAVKFGRMS 204
>gi|71980508|ref|NP_001020976.1| Protein NHR-23, isoform b [Caenorhabditis elegans]
gi|1255257|gb|AAA96057.1| CHR3 [Caenorhabditis elegans]
gi|20338930|emb|CAD30427.1| Protein NHR-23, isoform b [Caenorhabditis elegans]
Length = 553
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/78 (43%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C C++++ NR C+ CRL+
Sbjct: 128 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSIVNY-QCPRQKNCVVDRVNRNRCQYCRLK 186
Query: 65 KCLMVGMSKSGSRYGRRS 82
KC+ +GMS+ ++GR S
Sbjct: 187 KCIELGMSRDAVKFGRMS 204
>gi|426217053|ref|XP_004002768.1| PREDICTED: retinoic acid receptor RXR-gamma [Ovis aries]
Length = 463
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECANSGHEDM 234
>gi|40886675|gb|AAR96256.1| retinoid X receptor gamma [Sus scrofa]
Length = 431
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 103 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 161
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 162 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECASSGHEDM 202
>gi|403290000|ref|XP_003936122.1| PREDICTED: nuclear receptor subfamily 1 group D member 2 [Saimiri
boliviensis boliviensis]
Length = 586
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 110 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 169
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 170 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 199
>gi|115394370|gb|ABI97117.1| estrogen receptor-like protein isoform variant 1 [Marisa
cornuarietis]
gi|115394372|gb|ABI97118.1| estrogen receptor-like protein isoform variant 2 [Marisa
cornuarietis]
Length = 470
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C+VC + A+GFH+G ++CEGCK+FF RS P C N C I+K R SC++CR
Sbjct: 63 KLCQVCNDNASGFHYGVWSCEGCKAFFKRSIQG-PVDYMCPATNNCTIDKHRRKSCQACR 121
Query: 63 LRKCLMVGMSKSGSRYGRR 81
LRKC VGM+K R R+
Sbjct: 122 LRKCYEVGMNKGSQRKERK 140
>gi|66734827|gb|AAY53653.1| estrogen receptor alpha [Microtus ochrogaster]
Length = 599
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 189 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 247
Query: 65 KCLMVGMSKSGSRYGRR 81
KC VGM K G R RR
Sbjct: 248 KCYEVGMMKGGIRKDRR 264
>gi|344288189|ref|XP_003415833.1| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor subfamily 1 group
D member 2-like [Loxodonta africana]
Length = 581
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 106 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 165
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 166 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 195
>gi|687735|gb|AAA62508.1| Rev-ErbA-beta, partial [Rattus norvegicus]
Length = 533
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 58 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 117
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 118 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 147
>gi|187856988|dbj|BAG31994.1| gonad estrogen receptor alpha1 [Xenopus laevis]
Length = 466
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 10/102 (9%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 60 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 115
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
RLRKC VGM K G R RR H ++Q+++ EQ+ +
Sbjct: 116 RLRKCYEVGMMKGGIRKDRRGGRMLKH---KQQKEEPEQKND 154
>gi|332219399|ref|XP_003258843.1| PREDICTED: retinoic acid receptor RXR-gamma [Nomascus leucogenys]
Length = 463
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECATGGHEDM 234
>gi|296229938|ref|XP_002760488.1| PREDICTED: retinoic acid receptor RXR-gamma [Callithrix jacchus]
Length = 463
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECASNGHEDM 234
>gi|170062760|ref|XP_001866809.1| ecdysone-inducible protein E78A [Culex quinquefasciatus]
gi|167880574|gb|EDS43957.1| ecdysone-inducible protein E78A [Culex quinquefasciatus]
Length = 489
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+G+H+G +CEGCK FF RS C + +C++ + NR C+ CR +
Sbjct: 29 CKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEY-RCLRDGKCLVIRLNRNRCQYCRFK 87
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ RYGR
Sbjct: 88 KCLAVGMSRDSVRYGR 103
>gi|432866253|ref|XP_004070760.1| PREDICTED: nuclear receptor subfamily 1 group D member 2-like
[Oryzias latipes]
Length = 574
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 48/76 (63%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS + C N C+I + NR C+ CR +
Sbjct: 118 CKVCGDIASGFHYGVHACEGCKGFFRRSIQQNINYKMCVKNENCLIMRMNRNRCQHCRFK 177
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 178 KCLAVGMSRDAVRFGR 193
>gi|383855824|ref|XP_003703410.1| PREDICTED: ecdysone-induced protein 78C-like [Megachile rotundata]
Length = 462
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+G+H+G +CEGCK FF RS C + +C++ + NR C+ CR +
Sbjct: 32 CRVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEY-RCLRDGKCLVIRLNRNRCQYCRFK 90
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ RYGR
Sbjct: 91 KCLAVGMSRDSVRYGR 106
>gi|324503053|gb|ADY41332.1| Nuclear hormone receptor family member nhr-23 [Ascaris suum]
Length = 465
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 11/96 (11%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS + + + C C I++ NR C+ CRL+
Sbjct: 57 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSAIVNY-HCTRGQTCTIDRVNRNKCQFCRLK 115
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQ 100
KCL +GMS+ ++GR LQ++Q++ +Q
Sbjct: 116 KCLELGMSRDSVKFGR----------LQKKQREKQQ 141
>gi|148688702|gb|EDL20649.1| nuclear receptor subfamily 1, group D, member 2, isoform CRA_a [Mus
musculus]
Length = 599
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 126 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 185
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 186 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 215
>gi|68132022|gb|AAY85277.1| Rev-erbgamma-A [Danio rerio]
Length = 462
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 48/76 (63%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS + C N C+I + NR C+ CR +
Sbjct: 6 CKVCGDIASGFHYGVHACEGCKGFFRRSIQQNINYKMCVKNENCLIMRMNRNRCQHCRFK 65
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 66 KCLSVGMSRDAVRFGR 81
>gi|354474272|ref|XP_003499355.1| PREDICTED: estrogen receptor beta [Cricetulus griseus]
Length = 549
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 10/103 (9%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 168 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 226
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHCLLQEQQQQA 98
KC VGM K GSR R RS+ ++HCL + ++
Sbjct: 227 KCYEVGMVKCGSRRERCGYRIVRRQRSSSEQMHCLSKAKRNSG 269
>gi|378705844|gb|AFC34774.1| RORgamma2 [Ctenopharyngodon idella]
Length = 486
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N ++ C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQN-NAMYSCSRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|126341712|ref|XP_001380756.1| PREDICTED: nuclear receptor subfamily 1 group D member 2
[Monodelphis domestica]
Length = 575
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 97 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 156
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 157 KCLSVGMSRDAVRFGRIPKREKQRMLMEMQ 186
>gi|262213550|gb|ACY36002.1| peroxisome proliferator-activated receptor gamma [Bos grunniens]
Length = 475
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/92 (43%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQ 92
CR +KCL VGMS + R+GR K+ L +
Sbjct: 163 CRFQKCLAVGMSHNAIRFGRMPQAEKVKLLAE 194
>gi|50882280|gb|AAT85615.1| peroxisome proliferator-activated receptor beta [Sparus aurata]
Length = 506
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF R+ C+ + C I KKNR C+ CR +
Sbjct: 139 CKVCGDKASGFHYGVHACEGCKGFFRRTVRMKLEYDRCERS--CKIQKKNRNKCQYCRFQ 196
Query: 65 KCLMVGMSKSGSRYGR 80
KCL +GMS RYGR
Sbjct: 197 KCLSLGMSHDAIRYGR 212
>gi|46877096|ref|NP_997590.1| estrogen receptor beta isoform 1 [Mus musculus]
gi|26344125|dbj|BAC35719.1| unnamed protein product [Mus musculus]
gi|26344227|dbj|BAC35770.1| unnamed protein product [Mus musculus]
Length = 567
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 12/111 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 168 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 226
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHCLLQEQQQQAEQQTERTK 106
KC VGM K GSR R RS ++HCL + ++ T R K
Sbjct: 227 KCYEVGMVKCGSRRERCGYRIVRRQRSASEQVHCL--NKAKRTSGHTPRVK 275
>gi|194578847|ref|NP_001124064.1| nuclear receptor subfamily 1, group D, member 2a [Danio rerio]
gi|190339108|gb|AAI62908.1| Nr1d2a protein [Danio rerio]
Length = 504
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 51/90 (56%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C C I + NR C+ CR +
Sbjct: 86 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKTESCTIVRINRNRCQQCRFK 145
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K LL+ Q
Sbjct: 146 KCLSVGMSRDAVRFGRIPKREKQRMLLEMQ 175
>gi|292629355|ref|XP_700687.4| PREDICTED: nuclear receptor subfamily 1 group D member 2 [Danio
rerio]
Length = 576
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 47/76 (61%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C+I + NR C+ CR +
Sbjct: 119 CKVCGDIASGFHYGVHACEGCKGFFRRSIQQNIHYKMCVKNENCLIMRMNRNRCQHCRFK 178
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 179 KCLSVGMSRDAVRFGR 194
>gi|14994041|gb|AAK76395.1| Rev-Erb beta 1 [Danio rerio]
Length = 404
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 51/90 (56%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C C I + NR C+ CR +
Sbjct: 2 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKTESCTIVRINRNRCQQCRFK 61
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K LL+ Q
Sbjct: 62 KCLSVGMSRDAVRFGRIPKREKQRMLLEMQ 91
>gi|6166582|sp|Q63504.1|NR1D2_RAT RecName: Full=Nuclear receptor subfamily 1 group D member 2;
AltName: Full=EAR4; AltName: Full=Rev-erb-beta
gi|695707|emb|CAA58021.1| Rev-erb-Beta1 [Rattus norvegicus]
gi|149040000|gb|EDL94084.1| nuclear receptor subfamily 1, group D, member 2, isoform CRA_a
[Rattus norvegicus]
gi|149040001|gb|EDL94085.1| nuclear receptor subfamily 1, group D, member 2, isoform CRA_a
[Rattus norvegicus]
Length = 578
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>gi|386368305|gb|AFJ06911.1| peroxisome proliferator-activated receptor gamma [Columba livia]
Length = 475
Score = 85.9 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/80 (48%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR RKCL VGMS + R+GR
Sbjct: 163 CRFRKCLAVGMSHNAIRFGR 182
>gi|33386556|emb|CAD62447.1| peroxisome proliferator-activated receptor alpha [Pleuronectes
platessa]
Length = 474
Score = 85.9 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 4/115 (3%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VC + A+GFH+G CEGCK FF R+ +C+ + C I KKNR C+
Sbjct: 85 LNLECRVCSDKASGFHYGVHACEGCKGFFRRTIRLKLEYDKCERS--CKILKKNRNKCQY 142
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDLLLK 115
CR KCL VGMS + R+GR K+ L+ + E++ E L +L++
Sbjct: 143 CRFHKCLSVGMSHNAIRFGRMPQAEKLK--LKAESNMVEKEAESPMLADHKILVR 195
>gi|395825135|ref|XP_003785797.1| PREDICTED: retinoic acid receptor RXR-gamma [Otolemur garnettii]
Length = 463
Score = 85.9 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEVECAGGGHEDM 234
>gi|119584744|gb|EAW64340.1| nuclear receptor subfamily 1, group D, member 2, isoform CRA_a
[Homo sapiens]
Length = 333
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 28 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 87
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 88 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 117
>gi|256085383|ref|XP_002578901.1| nuclear hormone receptor [Schistosoma mansoni]
gi|360045547|emb|CCD83095.1| putative nuclear hormone receptor [Schistosoma mansoni]
Length = 845
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSIS-ECKNNNECIINKKNRTSCKSCRL 63
C+VC P++GFHFGA TCEGCK FF R+ L ++ EC NN+C I NR CKSCR
Sbjct: 174 CRVCSGPSSGFHFGALTCEGCKGFFRRTV--LSNVRLECLGNNDCPITPANRNMCKSCRF 231
Query: 64 RKCLMVGMSKSGS 76
++CL VGMSK+ S
Sbjct: 232 QRCLAVGMSKTES 244
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGR---------SYNNLPSISECKNNNECIINK 52
+Q C++CG+PA GFH A+ CE CK FF R + S S C C +
Sbjct: 78 DQACQICGQPAVGFHHRAYVCEACKKFFMRHTAARLRNSEIGSTVSESICPMGGRCRVEG 137
Query: 53 KNRTSCKSCRLRKCLMVGMS 72
R C CR RKCL +GM+
Sbjct: 138 PGRGKCPHCRYRKCLELGMT 157
>gi|2507414|sp|P50240.2|ESR1_OREAU RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha;
AltName: Full=Estradiol receptor; AltName: Full=Nuclear
receptor subfamily 3 group A member 1
gi|2808620|emb|CAA63774.1| estrogen receptor [Oreochromis aureus]
Length = 583
Score = 85.9 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 7/105 (6%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 139 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 197
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGH 109
KC VGM K G R R L +E+ A++QT + H
Sbjct: 198 KCYEVGMMKGGMRKDRG------RVLRREKHGPAQRQTSQNLPTH 236
>gi|51556245|ref|NP_991292.1| nuclear receptor subfamily 1 group D member 1 [Danio rerio]
gi|37362256|gb|AAQ91256.1| nuclear receptor subfamily 1, group D, member 1 [Danio rerio]
Length = 637
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 47/76 (61%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 128 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNETCTIMRINRNRCQQCRFK 187
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 188 KCLSVGMSRDAVRFGR 203
>gi|313214248|emb|CBY42707.1| unnamed protein product [Oikopleura dioica]
Length = 479
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS N + C + C++++ NR C++CRL+
Sbjct: 42 CKVCGDRSSGIHYGIITCEGCKGFFRRSQQNNARYN-CPRSGTCVVDRTNRNRCQACRLK 100
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPD 111
KCL +GMS+ ++GR S + ++ + Q +Q +E + PD
Sbjct: 101 KCLGLGMSRDAVKFGRMSKKQRDQLYMEVVKHQNQQASEAQSM--PD 145
>gi|410905381|ref|XP_003966170.1| PREDICTED: nuclear receptor ROR-alpha-like [Takifugu rubripes]
Length = 494
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSIS-ECKNNNECIINKKNRTSCKSCRL 63
CK+CG+ ++G H+G TCEGCK FF RS LP++S C + C I++ +R C+ CRL
Sbjct: 28 CKICGDKSSGVHYGVITCEGCKGFFRRS--QLPTVSYSCSRQSNCQIDRASRNRCQHCRL 85
Query: 64 RKCLMVGMSKSGSRYGRRS 82
+KCL GMS+ ++GR S
Sbjct: 86 QKCLAQGMSRDAVKFGRMS 104
>gi|110704210|gb|ABG88022.1| estrogen receptor beta 4 [Homo sapiens]
Length = 474
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 208 KCYEVGMVKCGSRRERCGYRLVRRQRSAGEQLHC 241
>gi|47124048|gb|AAH70035.1| NR1D2 protein [Homo sapiens]
Length = 408
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>gi|149755798|ref|XP_001492700.1| PREDICTED: retinoic acid receptor RXR-gamma-like [Equus caballus]
Length = 539
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECASSGHEDM 234
>gi|47216397|emb|CAG01948.1| unnamed protein product [Tetraodon nigroviridis]
Length = 426
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ ++G H+G FTCEGCKSFF RS + + C++N EC I++ +R C+ CRL+
Sbjct: 53 CVVCGDKSSGKHYGVFTCEGCKSFFKRSVRRNLTYT-CRSNRECQIDQHHRNQCQYCRLK 111
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K + GR
Sbjct: 112 KCFRVGMRKEAVQRGR 127
>gi|348565360|ref|XP_003468471.1| PREDICTED: estrogen receptor-like [Cavia porcellus]
Length = 596
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 7/104 (6%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 186 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 244
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLG 108
KC VGM K G R RR + + ++Q + + R ++G
Sbjct: 245 KCYDVGMIKGGIRKDRRGG------RMLKYKRQRDDEERRHEMG 282
>gi|297287011|ref|XP_001089921.2| PREDICTED: nuclear receptor subfamily 1 group D member 2 [Macaca
mulatta]
Length = 582
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>gi|432909380|ref|XP_004078181.1| PREDICTED: nuclear receptor ROR-alpha-like [Oryzias latipes]
Length = 495
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSIS-ECKNNNECIINKKNRTSCKSCRL 63
CK+CG+ ++G H+G TCEGCK FF RS +P++S C + C I++ +R C+ CRL
Sbjct: 25 CKICGDKSSGVHYGVITCEGCKGFFRRS--QMPTVSYSCSRQSNCQIDRASRNRCQHCRL 82
Query: 64 RKCLMVGMSKSGSRYGRRS 82
+KCL GMS+ ++GR S
Sbjct: 83 QKCLAQGMSRDAVKFGRMS 101
>gi|193299805|gb|ACF17956.1| estrogen receptor alpha variant U2 [Mus musculus]
gi|193299809|gb|ACF17958.1| estrogen receptor alpha variant U1 [Mus musculus]
Length = 596
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 186 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 244
Query: 65 KCLMVGMSKSGSRYGRR 81
KC VGM K G R RR
Sbjct: 245 KCYEVGMMKGGIRKDRR 261
>gi|6679695|ref|NP_031982.1| estrogen receptor [Mus musculus]
gi|119599|sp|P19785.1|ESR1_MOUSE RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha;
AltName: Full=Estradiol receptor; AltName: Full=Nuclear
receptor subfamily 3 group A member 1
gi|193180|gb|AAA37580.1| estrogen receptor [Mus musculus]
gi|26331560|dbj|BAC29510.1| unnamed protein product [Mus musculus]
gi|26334545|dbj|BAC30973.1| unnamed protein product [Mus musculus]
gi|148671634|gb|EDL03581.1| estrogen receptor 1 (alpha), isoform CRA_b [Mus musculus]
gi|148671635|gb|EDL03582.1| estrogen receptor 1 (alpha), isoform CRA_b [Mus musculus]
gi|148671636|gb|EDL03583.1| estrogen receptor 1 (alpha), isoform CRA_b [Mus musculus]
gi|189442821|gb|AAI67246.1| Estrogen receptor 1 (alpha) [synthetic construct]
gi|320118649|dbj|BAJ65337.1| estrogen receptor alpha [Mus musculus]
Length = 599
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 189 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 247
Query: 65 KCLMVGMSKSGSRYGRR 81
KC VGM K G R RR
Sbjct: 248 KCYEVGMMKGGIRKDRR 264
>gi|397494017|ref|XP_003817891.1| PREDICTED: nuclear receptor subfamily 2 group F member 6, partial
[Pan paniscus]
Length = 429
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 37/77 (48%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ ++G H+G FTCEGCKSFF RS S + C++N +C I++ +R C+ CRL+
Sbjct: 26 CVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYT-CRSNRDCQIDQHHRNQCQYCRLK 84
Query: 65 KCLMVGMSKSGSRYGRR 81
KC VGM K G R+
Sbjct: 85 KCFRVGMRKEGEERERK 101
>gi|344237342|gb|EGV93445.1| Nuclear receptor subfamily 1 group D member 2 [Cricetulus griseus]
Length = 265
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 18 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 77
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 78 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 107
>gi|440905289|gb|ELR55685.1| Nuclear receptor subfamily 1 group D member 2, partial [Bos
grunniens mutus]
Length = 578
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>gi|149038526|gb|EDL92856.1| rCG41136, isoform CRA_b [Rattus norvegicus]
Length = 660
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 250 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 308
Query: 65 KCLMVGMSKSGSRYGRR 81
KC VGM K G R RR
Sbjct: 309 KCYEVGMMKGGIRKDRR 325
>gi|291399718|ref|XP_002716247.1| PREDICTED: nuclear receptor subfamily 1, group D, member 2
[Oryctolagus cuniculus]
Length = 606
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C + + NR C+ CR +
Sbjct: 131 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSVMRMNRNRCQQCRFK 190
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 191 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 220
>gi|348565839|ref|XP_003468710.1| PREDICTED: retinoic acid receptor RXR-gamma-like [Cavia porcellus]
Length = 451
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 123 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 181
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + + GH D+
Sbjct: 182 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAKGASSGHEDM 222
>gi|351704240|gb|EHB07159.1| Estrogen receptor beta [Heterocephalus glaber]
Length = 535
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 10/103 (9%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHCLLQEQQQQA 98
KC VGM K GSR R R+ ++HCL + ++ A
Sbjct: 208 KCYEVGMVKCGSRRERCGYRVVRRQRNPGEQLHCLSKAKKHGA 250
>gi|187960103|ref|NP_035276.2| peroxisome proliferator-activated receptor gamma isoform 2 [Mus
musculus]
gi|18255316|gb|AAH21798.1| Peroxisome proliferator activated receptor gamma [Mus musculus]
gi|32395567|gb|AAO45097.1| peroxisome proliferator-activated receptor gamma isoform 2 [Mus
musculus]
gi|32395569|gb|AAO45098.1| peroxisome proliferator-activated receptor gamma isoform 2 [Mus
musculus]
gi|32395964|gb|AAP42200.1| peroxisome proliferator-activated receptor gamma transcript 2 [Mus
musculus]
gi|157890439|dbj|BAF80899.1| peroxisome proliferator-activated receptor gamma [Mus musculus]
gi|157890441|dbj|BAF80900.1| peroxisome proliferator-activated receptor gamma [Mus musculus]
Length = 505
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|401834511|gb|AFQ23187.1| peroxisome proliferator activated receptor gamma2 [Capra hircus]
Length = 505
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|24637392|gb|AAN63674.1|AF442965_1 estrogen receptor alpha [Coturnix japonica]
Length = 589
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 63/111 (56%), Gaps = 7/111 (6%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 179 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 234
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
RLRKC VGM K G R RR +E+Q+ + T+L P L
Sbjct: 235 RLRKCYEVGMMKGGIRKDRRGGRMMKQKRQREEQESRNGEASSTELRAPTL 285
>gi|372199357|gb|AEX88626.1| peroxisome proliferator-activated receptor gamma 2 [Capra hircus]
Length = 505
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|351696221|gb|EHA99139.1| Retinoic acid receptor RXR-gamma [Heterocephalus glaber]
Length = 463
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + + GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAKGASSGHEDM 234
>gi|351696033|gb|EHA98951.1| Peroxisome proliferator-activated receptor gamma [Heterocephalus
glaber]
Length = 505
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|148667109|gb|EDK99525.1| peroxisome proliferator activated receptor gamma [Mus musculus]
Length = 504
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 134 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 191
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 192 CRFQKCLAVGMSHNAIRFGR 211
>gi|117570937|gb|ABK39948.1| peroxisome proliferator activated receptor gamma 2 [Mus musculus]
Length = 505
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|6981386|ref|NP_037256.1| peroxisome proliferator-activated receptor gamma isoform 1 [Rattus
norvegicus]
gi|13431783|sp|O88275.2|PPARG_RAT RecName: Full=Peroxisome proliferator-activated receptor gamma;
Short=PPAR-gamma; AltName: Full=Nuclear receptor
subfamily 1 group C member 3
gi|5107415|gb|AAD40119.1|AF156666_1 peroxisome proliferator-activated receptor gamma 2 [Rattus
norvegicus]
gi|4115709|dbj|BAA36485.1| PPAR gamma2 [Rattus norvegicus]
gi|149049700|gb|EDM02154.1| peroxisome proliferator activated receptor gamma, isoform CRA_a
[Rattus norvegicus]
Length = 505
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|12584576|emb|CAA73382.2| peroxisome proliferator activated receptor (PPAR) gamma 2 [Rattus
norvegicus]
Length = 505
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|30794338|ref|NP_851367.1| peroxisome proliferator-activated receptor gamma [Bos taurus]
gi|13431789|sp|O18971.1|PPARG_BOVIN RecName: Full=Peroxisome proliferator-activated receptor gamma;
Short=PPAR-gamma; AltName: Full=Nuclear receptor
subfamily 1 group C member 3
gi|2653406|emb|CAA73033.1| peroxisome proliferator activated receptor gamma 2 [Bos taurus]
gi|296474654|tpg|DAA16769.1| TPA: peroxisome proliferator-activated receptor gamma [Bos taurus]
gi|440900005|gb|ELR51236.1| Peroxisome proliferator-activated receptor gamma [Bos grunniens
mutus]
Length = 505
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|432859606|ref|XP_004069177.1| PREDICTED: nuclear receptor subfamily 1 group D member 1-like
[Oryzias latipes]
Length = 568
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 47/76 (61%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C+I + NR C+ CR +
Sbjct: 119 CKVCGDIASGFHYGVHACEGCKGFFRRSIQQNIHYKMCVKNENCLIMRMNRNRCQHCRFK 178
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 179 KCLSVGMSRDAVRFGR 194
>gi|185134089|ref|NP_001117049.1| estrogen receptor beta [Salmo salar]
gi|40846404|gb|AAR92486.1| estrogen receptor beta [Salmo salar]
Length = 594
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 181 CAVCHDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 239
Query: 65 KCLMVGMSKSGSRYGRRS 82
KC VGM+K G R R S
Sbjct: 240 KCYEVGMTKCGMRRDRSS 257
>gi|354472063|ref|XP_003498260.1| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor subfamily 1 group
D member 2-like [Cricetulus griseus]
Length = 634
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 159 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 218
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 219 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 248
>gi|348521576|ref|XP_003448302.1| PREDICTED: nuclear receptor subfamily 1 group D member 2-like
[Oreochromis niloticus]
Length = 706
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 48/76 (63%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS + C N C+I + NR C+ CR +
Sbjct: 245 CKVCGDIASGFHYGVHACEGCKGFFRRSIQQNINYKMCVKNENCLIMRMNRNRCQHCRFK 304
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 305 KCLSVGMSRDAVRFGR 320
>gi|426256622|ref|XP_004021937.1| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor subfamily 1 group
D member 2 [Ovis aries]
Length = 588
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 53/94 (56%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+
Sbjct: 109 MVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQ 168
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
CR +KCL VGMS+ R+GR K L++ Q
Sbjct: 169 CRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 202
>gi|119918335|ref|XP_610586.3| PREDICTED: nuclear receptor subfamily 1 group D member 2 [Bos
taurus]
Length = 585
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 53/94 (56%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+
Sbjct: 106 MVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQ 165
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
CR +KCL VGMS+ R+GR K L++ Q
Sbjct: 166 CRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 199
>gi|189536156|ref|XP_691607.3| PREDICTED: nuclear receptor subfamily 1 group D member 2 [Danio
rerio]
Length = 570
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 48/76 (63%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS + C N C+I + NR C+ CR +
Sbjct: 114 CKVCGDIASGFHYGVHACEGCKGFFRRSIQQNINYKMCVKNENCLIMRMNRNRCQHCRFK 173
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 174 KCLSVGMSRDAVRFGR 189
>gi|297491334|ref|XP_002698802.1| PREDICTED: nuclear receptor subfamily 1 group D member 2 [Bos
taurus]
gi|296472291|tpg|DAA14406.1| TPA: nuclear receptor subfamily 1, group D, member 2 [Bos taurus]
Length = 585
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 53/94 (56%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+
Sbjct: 106 MVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQ 165
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
CR +KCL VGMS+ R+GR K L++ Q
Sbjct: 166 CRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 199
>gi|71060009|emb|CAJ18548.1| Pparg [Mus musculus]
Length = 505
Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|410951728|ref|XP_003982545.1| PREDICTED: peroxisome proliferator-activated receptor gamma isoform
1 [Felis catus]
Length = 505
Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|90823203|gb|ABE01103.1| peroxisome proliferator-activated receptor gamma 2 [Sus scrofa]
Length = 504
Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 134 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 191
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 192 CRFQKCLAVGMSHNAIRFGR 211
>gi|431921971|gb|ELK19144.1| Nuclear receptor subfamily 2 group F member 6 [Pteropus alecto]
Length = 481
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ ++G H+G FTCEGCKSFF RS S + C++N +C I++ +R C+ CRL+
Sbjct: 58 CVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYT-CRSNRDCQIDQHHRNQCQYCRLK 116
Query: 65 KCLMVGMSKSG 75
KC VGM K G
Sbjct: 117 KCFRVGMRKEG 127
>gi|347968055|ref|XP_003436151.1| AGAP002544-PB [Anopheles gambiae str. PEST]
gi|333468185|gb|EGK96862.1| AGAP002544-PB [Anopheles gambiae str. PEST]
Length = 717
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSC 61
N C VCG+ ++G H+G FTCEGCKSFF RS + S C+ N C I++ +R C+ C
Sbjct: 172 NIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYS-CRGNRNCPIDQHHRNQCQFC 230
Query: 62 RLRKCLMVGMSKSGSRYGR 80
RLRKCL +GM + + GR
Sbjct: 231 RLRKCLKMGMRREAVQRGR 249
>gi|391851683|ref|NP_001254665.1| estrogen receptor beta [Callithrix jacchus]
gi|14600269|gb|AAK71318.1|AF393816_1 estrogen receptor beta 2 [Callithrix jacchus]
Length = 486
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K GSR R
Sbjct: 208 KCYEVGMVKCGSRRER 223
>gi|410986573|ref|XP_003999584.1| PREDICTED: retinoic acid receptor RXR-gamma [Felis catus]
Length = 463
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ + C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLMYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECASSGHEDM 234
>gi|395847245|ref|XP_003796291.1| PREDICTED: peroxisome proliferator-activated receptor gamma
[Otolemur garnettii]
Length = 505
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|348573209|ref|XP_003472384.1| PREDICTED: estrogen receptor beta isoform 1 [Cavia porcellus]
Length = 549
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 10/101 (9%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 168 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 226
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHCLLQEQQQ 96
KC VGM K GSR R RS ++HCL + ++
Sbjct: 227 KCYEVGMVKCGSRRERCGYRVVRRQRSPGEQLHCLSKAKKH 267
>gi|301756739|ref|XP_002914218.1| PREDICTED: retinoic acid receptor RXR-gamma-like [Ailuropoda
melanoleuca]
Length = 463
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ + C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLMYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECASSGHEDM 234
>gi|197098440|ref|NP_001124655.1| peroxisome proliferator-activated receptor gamma [Pongo abelii]
gi|55725294|emb|CAH89512.1| hypothetical protein [Pongo abelii]
Length = 477
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 107 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCRY 164
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 165 CRFQKCLAVGMSHNAIRFGR 184
>gi|380016505|ref|XP_003692223.1| PREDICTED: ecdysone-induced protein 75B, isoforms C/D-like [Apis
florea]
Length = 892
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 35/71 (49%), Positives = 46/71 (64%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 90 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 149
Query: 65 KCLMVGMSKSG 75
KC+ VGMS+ G
Sbjct: 150 KCIAVGMSRDG 160
>gi|47523814|ref|NP_999544.1| peroxisome proliferator-activated receptor gamma [Sus scrofa]
gi|13431782|sp|O62807.1|PPARG_PIG RecName: Full=Peroxisome proliferator-activated receptor gamma;
Short=PPAR-gamma; AltName: Full=Nuclear receptor
subfamily 1 group C member 3
gi|3065957|gb|AAC14348.1| peroxisome proliferator-activated receptor gamma 2 [Sus scrofa]
gi|4378477|gb|AAD19577.1| peroxisome proliferator activated receptor gamma 2 [Sus scrofa]
gi|47678889|dbj|BAD20646.1| peroxisome proliferator-activated receptor gamma 2 [Sus scrofa]
Length = 504
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 134 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 191
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 192 CRFQKCLAVGMSHNAIRFGR 211
>gi|373938668|gb|AEY79497.1| peroxisome proliferator activated receptor gamma 1a [Bubalus
bubalis]
Length = 475
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|296225870|ref|XP_002758685.1| PREDICTED: peroxisome proliferator-activated receptor gamma isoform
1 [Callithrix jacchus]
Length = 505
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|185135764|ref|NP_001118225.1| estrogen receptor beta 1 [Oncorhynchus mykiss]
gi|77020883|gb|ABA60433.1| estrogen receptor beta 1 [Oncorhynchus mykiss]
Length = 594
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 181 CAVCHDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 239
Query: 65 KCLMVGMSKSGSRYGRRS 82
KC VGM+K G R R S
Sbjct: 240 KCYEVGMTKCGMRRDRSS 257
>gi|155369642|ref|NP_001094391.1| peroxisome proliferator-activated receptor gamma [Ovis aries]
gi|23306673|gb|AAN15206.1| peroxisome proliferator activated receptor gamma 1 protein [Ovis
aries]
gi|262385089|gb|ACY64542.1| peroxisome proliferator-activated receptor gamma [Capra hircus]
gi|314912407|gb|ADT63789.1| peroxisome proliferator-activated receptor gamma [Capra hircus]
Length = 475
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|215848844|dbj|BAH01724.1| estrogen receptor alpha [Torgos tracheliotus]
Length = 587
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 13/103 (12%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 177 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 232
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
RLRKC VGM K G R RR + +Q++Q E+Q R
Sbjct: 233 RLRKCYEVGMMKGGIRKDRRGG------RMMKQKRQREEQDSR 269
>gi|163929562|ref|NP_001106647.1| peroxisome proliferator-activated receptor gamma [Felis catus]
gi|162424857|gb|ABX90078.1| peroxisome proliferator-activated receptor gamma [Felis catus]
Length = 505
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|13432235|sp|P37238.3|PPARG_MOUSE RecName: Full=Peroxisome proliferator-activated receptor gamma;
Short=PPAR-gamma; AltName: Full=Nuclear receptor
subfamily 1 group C member 3
gi|500640|gb|AAA62277.1| peroxisome proliferator activated protein-gamma-2 [Mus musculus]
Length = 505
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|215848840|dbj|BAH01723.1| estrogen receptor alpha [Gyps africanus]
Length = 587
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 13/103 (12%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 177 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 232
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
RLRKC VGM K G R RR + +Q++Q E+Q R
Sbjct: 233 RLRKCYEVGMMKGGIRKDRRGG------RMMKQKRQREEQDSR 269
>gi|443699249|gb|ELT98830.1| hypothetical protein CAPTEDRAFT_226941 [Capitella teleta]
Length = 941
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 55/161 (34%), Positives = 81/161 (50%), Gaps = 28/161 (17%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL--PSISECKNNNECIINKKNRTSCKSCR 62
C VCG+ ++G H+G CEGCK FF R+ ++ P +C N C + R C+ CR
Sbjct: 287 CLVCGDKSSGVHYGVLACEGCKGFFRRALQDIGDPGRKKCYYNRNCEVTVATRNRCQYCR 346
Query: 63 LRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAE-QQTERTKLG----------HPD 111
L+KCL +GMS+S ++ GRRS K+ ++ E + E QT + G H +
Sbjct: 347 LQKCLALGMSRSAAKLGRRSR--KMREMISEATRTIEDSQTAQALHGLLSLKSPESSHTN 404
Query: 112 LLLKLDKFTNNNTI----VTNNNLI--LQL-------LQNP 139
L + K T++ ++ V N I LQL LQNP
Sbjct: 405 LTPSIAKATDSPSVQTVQVQQGNFIRTLQLLPGTKLVLQNP 445
>gi|402859361|ref|XP_003894131.1| PREDICTED: peroxisome proliferator-activated receptor gamma [Papio
anubis]
Length = 424
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 184 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 241
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 242 CRFQKCLAVGMSHNAIRFGR 261
>gi|327263925|ref|XP_003216767.1| PREDICTED: nuclear receptor subfamily 1 group D member 2-like,
partial [Anolis carolinensis]
Length = 576
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 48/76 (63%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS + C N C+I + NR C+ CR +
Sbjct: 133 CKVCGDIASGFHYGVHACEGCKGFFRRSIQQNINYKMCVKNENCMIMRMNRNRCQHCRFK 192
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 193 KCLAVGMSRDAVRFGR 208
>gi|301771798|ref|XP_002921313.1| PREDICTED: peroxisome proliferator-activated receptor gamma-like
[Ailuropoda melanoleuca]
Length = 529
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 159 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 216
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 217 CRFQKCLAVGMSHNAIRFGR 236
>gi|149728268|ref|XP_001492480.1| PREDICTED: peroxisome proliferator-activated receptor gamma-like
isoform 2 [Equus caballus]
Length = 474
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 104 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 161
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 162 CRFQKCLAVGMSHNAIRFGR 181
>gi|26344309|dbj|BAC35811.1| unnamed protein product [Mus musculus]
Length = 381
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>gi|3646470|emb|CAA07225.1| peroxisome proliferator-activated receptor-gamma 2 [Sus scrofa]
Length = 504
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 134 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 191
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 192 CRFQKCLAVGMSHNAIRFGR 211
>gi|14600267|gb|AAK71317.1|AF393815_1 estrogen receptor beta 2 [Macaca arctoides]
Length = 499
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDFASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 208 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQVHC 241
>gi|348573211|ref|XP_003472385.1| PREDICTED: estrogen receptor beta isoform 2 [Cavia porcellus]
Length = 567
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 10/101 (9%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 168 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 226
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHCLLQEQQQ 96
KC VGM K GSR R RS ++HCL + ++
Sbjct: 227 KCYEVGMVKCGSRRERCGYRVVRRQRSPGEQLHCLSKAKKH 267
>gi|15723732|gb|AAL05262.1| peroxisome proliferator-activated receptor gamma 2 [Macaca
fascicularis]
Length = 505
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|630897|pir||C61600 segmentation protein knirps - house fly (fragment)
Length = 180
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/43 (83%), Positives = 40/43 (93%)
Query: 49 IINKKNRTSCKSCRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
+I+KKNRT+CK+CRLRKC VGMSK GSRYGRRSNWFKIHCLL
Sbjct: 1 VIDKKNRTTCKACRLRKCYTVGMSKGGSRYGRRSNWFKIHCLL 43
>gi|66864891|ref|NP_001019803.1| peroxisome proliferator-activated receptor gamma [Canis lupus
familiaris]
gi|75068622|sp|Q4U3Q4.1|PPARG_CANFA RecName: Full=Peroxisome proliferator-activated receptor gamma;
Short=PPAR-gamma; AltName: Full=Nuclear receptor
subfamily 1 group C member 3
gi|63195114|gb|AAY34942.1| peroxisome proliferator-activated receptor gamma [Canis lupus
familiaris]
Length = 505
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|74136281|ref|NP_001028032.1| peroxisome proliferator-activated receptor gamma [Macaca mulatta]
gi|13431788|sp|O18924.1|PPARG_MACMU RecName: Full=Peroxisome proliferator-activated receptor gamma;
Short=PPAR-gamma; AltName: Full=Nuclear receptor
subfamily 1 group C member 3
gi|2645731|gb|AAB87480.1| peroxisome proliferator-activated receptor gamma 2 [Macaca mulatta]
gi|355746519|gb|EHH51133.1| hypothetical protein EGM_10463 [Macaca fascicularis]
Length = 505
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|2653404|emb|CAA73032.1| peroxisome proliferator activated receptor gamma 1 [Bos taurus]
gi|94534932|gb|AAI16099.1| PPARG protein [Bos taurus]
Length = 475
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|374534098|gb|AEZ53930.1| peroxisome proliferator activated receptor gamma [Capra hircus]
Length = 475
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|5821726|gb|AAD52984.1| estrogen receptor alpha [Homo sapiens]
Length = 444
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 34 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 92
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 93 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRGE 128
>gi|47209529|emb|CAF90265.1| unnamed protein product [Tetraodon nigroviridis]
Length = 825
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC+SCRLR
Sbjct: 291 CAVCHDYASGYHYGVWSCEGCKAFFKRSIQRQNDYI-CPATNQCTIDKNRRKSCQSCRLR 349
Query: 65 KCLMVGMSKSG 75
KC VGM+K G
Sbjct: 350 KCYEVGMTKCG 360
>gi|432853451|ref|XP_004067713.1| PREDICTED: nuclear receptor ROR-beta-like [Oryzias latipes]
Length = 473
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N ++ C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQN-NAMYSCSRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 69 KCLALGMSRDAVKFGRMS 86
>gi|407907527|gb|AFU48567.1| estrogen receptor alpha [Columba livia]
Length = 587
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 13/103 (12%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 177 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 232
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
RLRKC VGM K G R RR + +Q++Q E+Q R
Sbjct: 233 RLRKCYEVGMMKGGIRKDRRGG------RMMKQKRQREEQDSR 269
>gi|164633046|gb|ABY64736.1| estrogen receptor beta [Cebus apella]
Length = 530
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM+K GSR R
Sbjct: 208 KCYEVGMAKCGSRRER 223
>gi|312165966|gb|ADQ38960.1| estrogen receptor alpha [Gallus gallus]
Length = 589
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 13/103 (12%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 179 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 234
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
RLRKC VGM K G R RR + +Q++Q E+Q R
Sbjct: 235 RLRKCYEVGMMKGGIRKDRRGG------RMMKQKRQREEQDSR 271
>gi|150408766|gb|ABR68645.1| estrogen receptor, partial [Anas platyrhynchos]
Length = 531
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 13/103 (12%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 179 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 234
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
RLRKC VGM K G R RR + +Q++Q E+Q R
Sbjct: 235 RLRKCYEVGMMKGGIRKDRRGG------RMMKQKRQREEQDSR 271
>gi|281348859|gb|EFB24443.1| hypothetical protein PANDA_002085 [Ailuropoda melanoleuca]
Length = 447
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ + C++N +C+I+K+ R C+
Sbjct: 119 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLMYTCRDNKDCLIDKRQRNRCQY 177
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 178 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECASSGHEDM 218
>gi|46877094|ref|NP_034287.3| estrogen receptor beta isoform 2 [Mus musculus]
gi|187954893|gb|AAI41076.1| Estrogen receptor 2 (beta) [Mus musculus]
gi|219520536|gb|AAI45330.1| Estrogen receptor 2 (beta) [Mus musculus]
Length = 549
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 24/145 (16%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 168 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----ICPATNQCTIDKNRRKSCQAC 223
Query: 62 RLRKCLMVGMSKSGSRYGR---------RSNWFKIHCLLQEQQQQAEQQTERTK------ 106
RLRKC VGM K GSR R RS ++HCL + ++ T R K
Sbjct: 224 RLRKCYEVGMVKCGSRRERCGYRIVRRQRSASEQVHCL--NKAKRTSGHTPRVKELLLNS 281
Query: 107 LGHPDLLLKLDKFTNNNTIVTNNNL 131
L L+L L + N +V+ ++
Sbjct: 282 LSPEQLVLTLLEAEPPNVLVSRPSM 306
>gi|333609293|ref|NP_001201831.1| estrogen receptor beta isoform 3 [Homo sapiens]
gi|111283675|gb|ABH09189.1| estrogen receptor beta isoform 4 [Homo sapiens]
Length = 481
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 208 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHC 241
>gi|62088820|dbj|BAD92857.1| estrogen receptor 2 (ER beta) variant [Homo sapiens]
Length = 504
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 181 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 239
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 240 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHC 273
>gi|426377141|ref|XP_004055333.1| PREDICTED: estrogen receptor beta isoform 3 [Gorilla gorilla
gorilla]
Length = 481
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 208 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHC 241
>gi|426377139|ref|XP_004055332.1| PREDICTED: estrogen receptor beta isoform 2 [Gorilla gorilla
gorilla]
Length = 495
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 208 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHC 241
>gi|441594980|ref|XP_003267844.2| PREDICTED: estrogen receptor beta isoform 3 [Nomascus leucogenys]
Length = 481
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 208 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHC 241
>gi|114653474|ref|XP_001170225.1| PREDICTED: estrogen receptor beta isoform 4 [Pan troglodytes]
Length = 495
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 208 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHC 241
>gi|333609295|ref|NP_001201832.1| estrogen receptor beta isoform 4 [Homo sapiens]
gi|111283677|gb|ABH09190.1| estrogen receptor beta isoform 5 [Homo sapiens]
Length = 472
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 208 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHC 241
>gi|221325831|gb|ACM16808.1| estrogen receptor [Azumapecten farreri]
Length = 449
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSC 61
N+ C+VC + A+GFH+G ++CEGCK+FF RS P C N C I+K R SC++C
Sbjct: 95 NKLCQVCNDNASGFHYGVWSCEGCKAFFKRSIQG-PVDYVCPATNTCTIDKHRRKSCQAC 153
Query: 62 RLRKCLMVGMSKSGSRYGRR 81
RLRKC VGM+K R R+
Sbjct: 154 RLRKCYEVGMNKGSQRKDRK 173
>gi|410048367|ref|XP_003952556.1| PREDICTED: estrogen receptor beta [Pan troglodytes]
Length = 481
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 208 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHC 241
>gi|262410963|gb|ACY66850.1| estrogen-related receptor [Chironomus riparius]
Length = 443
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+GFH+G +CE CK+FF R+ + C NN+C INK+ R +C++CR R
Sbjct: 96 CLVCGDVASGFHYGVASCEACKAFFKRTVQGNIEYT-CPANNDCEINKRRRKACQACRFR 154
Query: 65 KCLMVGMSKSGSRYGR 80
KCLM+GM K G R R
Sbjct: 155 KCLMMGMLKEGVRLDR 170
>gi|45383986|ref|NP_990514.1| estrogen receptor [Gallus gallus]
gi|119597|sp|P06212.1|ESR1_CHICK RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha;
AltName: Full=Estradiol receptor; AltName: Full=Nuclear
receptor subfamily 3 group A member 1
gi|63380|emb|CAA27433.1| unnamed protein product [Gallus gallus]
Length = 589
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 13/103 (12%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 179 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 234
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
RLRKC VGM K G R RR + +Q++Q E+Q R
Sbjct: 235 RLRKCYEVGMMKGGIRKDRRGGE------MMKQKRQREEQDSR 271
>gi|94538325|ref|NP_001035365.1| estrogen receptor beta isoform 2 [Homo sapiens]
gi|2961559|gb|AAC05751.1| estrogen receptor beta2 splice variant [Homo sapiens]
gi|3345672|dbj|BAA31966.1| estrogen receptor beta cx [Homo sapiens]
gi|119601256|gb|EAW80850.1| estrogen receptor 2 (ER beta), isoform CRA_d [Homo sapiens]
gi|119601257|gb|EAW80851.1| estrogen receptor 2 (ER beta), isoform CRA_d [Homo sapiens]
gi|119601258|gb|EAW80852.1| estrogen receptor 2 (ER beta), isoform CRA_d [Homo sapiens]
gi|158258172|dbj|BAF85059.1| unnamed protein product [Homo sapiens]
gi|325495453|gb|ADZ17332.1| estrogen nuclear receptor beta variant b [Homo sapiens]
Length = 495
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 208 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHC 241
>gi|118404556|ref|NP_001072663.1| RAR-related orphan receptor A [Xenopus (Silurana) tropicalis]
gi|115312907|gb|AAI23954.1| RAR-related orphan receptor A [Xenopus (Silurana) tropicalis]
Length = 267
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 17 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 75
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KCL VGMS+ ++GR S + + Q+ + +QQ +
Sbjct: 76 KCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQRD 114
>gi|14627168|gb|AAG60685.2| peroxisome proliferator activated receptor-gamma [Cavia porcellus]
Length = 475
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIGLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|380865470|sp|O08537.3|ESR2_MOUSE RecName: Full=Estrogen receptor beta; Short=ER-beta; AltName:
Full=Nuclear receptor subfamily 3 group A member 2
Length = 530
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 24/145 (16%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----ICPATNQCTIDKNRRKSCQAC 204
Query: 62 RLRKCLMVGMSKSGSRYGR---------RSNWFKIHCLLQEQQQQAEQQTERTK------ 106
RLRKC VGM K GSR R RS ++HCL + ++ T R K
Sbjct: 205 RLRKCYEVGMVKCGSRRERCGYRIVRRQRSASEQVHCL--NKAKRTSGHTPRVKELLLNS 262
Query: 107 LGHPDLLLKLDKFTNNNTIVTNNNL 131
L L+L L + N +V+ ++
Sbjct: 263 LSPEQLVLTLLEAEPPNVLVSRPSM 287
>gi|76667598|dbj|BAE45626.1| estrogen receptor alpha [Crocodylus niloticus]
Length = 587
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 65/111 (58%), Gaps = 12/111 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 179 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 234
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
RLRKC VGM K G R RR +L++++Q+ EQ + D+
Sbjct: 235 RLRKCYEVGMMKGGIRKDRRGGR-----MLKQKRQREEQDARNGETATADM 280
>gi|1945622|dbj|BAA18949.1| PPAR gamma2 [Homo sapiens]
Length = 506
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|344276443|ref|XP_003410018.1| PREDICTED: peroxisome proliferator-activated receptor gamma-like
[Loxodonta africana]
Length = 486
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 116 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 173
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 174 CRFQKCLAVGMSHNAIRFGR 193
>gi|332231710|ref|XP_003265037.1| PREDICTED: peroxisome proliferator-activated receptor gamma isoform
2 [Nomascus leucogenys]
Length = 505
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|410951730|ref|XP_003982546.1| PREDICTED: peroxisome proliferator-activated receptor gamma isoform
2 [Felis catus]
Length = 475
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|403270244|ref|XP_003927098.1| PREDICTED: peroxisome proliferator-activated receptor gamma isoform
2 [Saimiri boliviensis boliviensis]
Length = 505
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|403270242|ref|XP_003927097.1| PREDICTED: peroxisome proliferator-activated receptor gamma isoform
1 [Saimiri boliviensis boliviensis]
Length = 475
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|22003526|gb|AAM88773.1| peroxisome proliferator activated receptor-gamma 1 [Anas
platyrhynchos]
Length = 475
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|432110903|gb|ELK34377.1| Peroxisome proliferator-activated receptor gamma [Myotis davidii]
Length = 466
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|2645733|gb|AAB87481.1| peroxisome proliferator-activated receptor gamma 1-a [Macaca
mulatta]
gi|2645735|gb|AAB87482.1| peroxisome proliferator-activated receptor gamma 1-b [Macaca
mulatta]
Length = 475
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|187960105|ref|NP_001120802.1| peroxisome proliferator-activated receptor gamma isoform 1 [Mus
musculus]
gi|514307|gb|AAA19971.1| peroxisome proliferator-activated receptor gamma [Mus musculus]
Length = 475
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|15723730|gb|AAL05261.1| peroxisome proliferator-activated receptor gamma 1 [Macaca
fascicularis]
gi|15723734|gb|AAL05263.1| peroxisome proliferator-activated receptor gamma 3 [Macaca
fascicularis]
gi|21552437|gb|AAL05268.1| peroxisome proliferator-activated receptor gamma 5 [Macaca
fascicularis]
gi|21552441|gb|AAL05270.1| peroxisome proliferator-activated receptor gamma 7 [Macaca
fascicularis]
Length = 475
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|21552435|gb|AAL05267.1| peroxisome proliferator-activated receptor gamma 4 [Macaca
fascicularis]
gi|21552439|gb|AAL05269.1| peroxisome proliferator-activated receptor gamma 6 [Macaca
fascicularis]
Length = 483
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 113 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 170
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 171 CRFQKCLAVGMSHNAIRFGR 190
>gi|7446201|pir||JE0279 peroxisome proliferator-activated receptor gamma 1 - pig
gi|3646468|emb|CAA07224.1| peroxisome proliferator-cctivated receptor gamma 1 [Sus scrofa]
Length = 475
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|47678881|dbj|BAD20642.1| peroxisome proliferator-activated receptor gamma 1a [Sus scrofa]
gi|47678883|dbj|BAD20643.1| peroxisome proliferator-activated receptor gamma 1b [Sus scrofa]
gi|47678885|dbj|BAD20644.1| peroxisome proliferator-activated receptor gamma 1c [Sus scrofa]
gi|47678887|dbj|BAD20645.1| peroxisome proliferator-activated receptor gamma 1d [Sus scrofa]
Length = 475
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|29169314|gb|AAO66458.1| CREB3L2-PPARgamma [Homo sapiens]
Length = 584
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 214 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 271
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 272 CRFQKCLAVGMSHNAIRFGR 291
>gi|13124195|sp|P57783.1|ESR3_MICUN RecName: Full=Estrogen receptor gamma; Short=ER-gamma; AltName:
Full=Nuclear receptor subfamily 3 group A member 3
gi|10312210|gb|AAG16712.1|AF298182_1 estrogen receptor gamma [Micropogonias undulatus]
Length = 565
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS + C NEC I+K R SC++CRLR
Sbjct: 169 CAVCHDYASGYHYGVWSCEGCKAFFKRSIQR-DNEYICPATNECTIDKNRRKSCQACRLR 227
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM+K G R R
Sbjct: 228 KCYEVGMTKCGMRKER 243
>gi|60654177|gb|AAX29781.1| peroxisome proliferative activated receptor gamma [synthetic
construct]
gi|60830772|gb|AAX36944.1| peroxisome proliferative activated receptor gamma [synthetic
construct]
Length = 476
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|332231708|ref|XP_003265036.1| PREDICTED: peroxisome proliferator-activated receptor gamma isoform
1 [Nomascus leucogenys]
gi|332231712|ref|XP_003265038.1| PREDICTED: peroxisome proliferator-activated receptor gamma isoform
3 [Nomascus leucogenys]
gi|332231714|ref|XP_003265039.1| PREDICTED: peroxisome proliferator-activated receptor gamma isoform
4 [Nomascus leucogenys]
gi|441665312|ref|XP_004091803.1| PREDICTED: peroxisome proliferator-activated receptor gamma
[Nomascus leucogenys]
gi|441665315|ref|XP_004091804.1| PREDICTED: peroxisome proliferator-activated receptor gamma
[Nomascus leucogenys]
Length = 477
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 107 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 164
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 165 CRFQKCLAVGMSHNAIRFGR 184
>gi|216409692|dbj|BAH02283.1| peroxisome proliferator activated receptor gamma [Homo sapiens]
Length = 477
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 107 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 164
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 165 CRFQKCLAVGMSHNAIRFGR 184
>gi|90823201|gb|ABE01102.1| peroxisome proliferator-activated receptor gamma 1 [Sus scrofa]
Length = 475
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|62898788|dbj|BAD97248.1| peroxisome proliferative activated receptor gamma isoform 2 variant
[Homo sapiens]
Length = 478
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 108 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 165
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 166 CRFQKCLAVGMSHNAIRFGR 185
>gi|16580153|gb|AAL15175.1| estrogen receptor beta type II splice variant [Mus musculus]
Length = 503
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 24/145 (16%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 104 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----ICPATNQCTIDKNRRKSCQAC 159
Query: 62 RLRKCLMVGMSKSGSRYGR---------RSNWFKIHCLLQEQQQQAEQQTERTK------ 106
RLRKC VGM K GSR R RS ++HCL + ++ T R K
Sbjct: 160 RLRKCYEVGMVKCGSRRERCGYRIVRRQRSASEQVHCL--NKAKRTSGHTPRVKELLLNS 217
Query: 107 LGHPDLLLKLDKFTNNNTIVTNNNL 131
L L+L L + N +V+ ++
Sbjct: 218 LSPEQLVLTLLEAEPPNVLVSRPSM 242
>gi|426339484|ref|XP_004033680.1| PREDICTED: peroxisome proliferator-activated receptor gamma isoform
2 [Gorilla gorilla gorilla]
Length = 505
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|643611|gb|AAA62110.1| PPAR gamma [Mus musculus]
Length = 475
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|223941854|ref|NP_001138838.1| peroxisome proliferator-activated receptor gamma isoform 2 [Rattus
norvegicus]
gi|223941857|ref|NP_001138839.1| peroxisome proliferator-activated receptor gamma isoform 2 [Rattus
norvegicus]
gi|5107413|gb|AAD40118.1|AF156665_1 peroxisome proliferator-activated receptor gamma 1 [Rattus
norvegicus]
gi|7533192|gb|AAF63385.1|AF246457_1 peroxisome proliferator-activated receptor [Rattus norvegicus]
gi|7533194|gb|AAF63386.1|AF246458_1 peroxisome proliferator-activated receptor [Rattus norvegicus]
gi|3492843|dbj|BAA32540.1| PPAR-gamma protein [Rattus norvegicus]
gi|149049701|gb|EDM02155.1| peroxisome proliferator activated receptor gamma, isoform CRA_b
[Rattus norvegicus]
gi|149049702|gb|EDM02156.1| peroxisome proliferator activated receptor gamma, isoform CRA_b
[Rattus norvegicus]
Length = 475
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|346716100|ref|NP_001231210.1| peroxisome proliferator-activated receptor gamma [Cricetulus
griseus]
gi|13431791|sp|P57797.1|PPARG_CRIGR RecName: Full=Peroxisome proliferator-activated receptor gamma;
Short=PPAR-gamma; AltName: Full=Nuclear receptor
subfamily 1 group C member 3
gi|461359|emb|CAA83219.1| peroxisome proliferator activated receptor gamma [Cricetulus
griseus]
Length = 475
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|397511913|ref|XP_003826306.1| PREDICTED: peroxisome proliferator-activated receptor gamma isoform
1 [Pan paniscus]
Length = 505
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|379136516|gb|AFC93487.1| nuclear receptor subfamily 1 group D member 1, partial [Gadus
morhua]
Length = 111
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 48/76 (63%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS + C N C+I + NR C+ CR +
Sbjct: 4 CKVCGDIASGFHYGVHACEGCKGFFRRSIQQNINYKMCVKNENCLIMRMNRNRCQHCRFK 63
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 64 KCLSVGMSRDAVRFGR 79
>gi|355712925|gb|AES04513.1| peroxisome proliferator-activated receptor gamma [Mustela putorius
furo]
Length = 517
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 148 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 205
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 206 CRFQKCLAVGMSHNAIRFGR 225
>gi|300676827|gb|ADK26703.1| estrogen receptor 1 [Zonotrichia albicollis]
Length = 587
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 13/103 (12%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 177 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 232
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
RLRKC VGM K G R RR + +Q++Q E+Q R
Sbjct: 233 RLRKCYEVGMMKGGIRKDRRGG------RVMKQKRQREEQDSR 269
>gi|296225874|ref|XP_002758687.1| PREDICTED: peroxisome proliferator-activated receptor gamma isoform
3 [Callithrix jacchus]
Length = 475
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|281347607|gb|EFB23191.1| hypothetical protein PANDA_010204 [Ailuropoda melanoleuca]
Length = 478
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 108 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 165
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 166 CRFQKCLAVGMSHNAIRFGR 185
>gi|114585446|ref|XP_001153669.1| PREDICTED: peroxisome proliferator-activated receptor gamma isoform
3 [Pan troglodytes]
Length = 505
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|20336229|ref|NP_056953.2| peroxisome proliferator-activated receptor gamma isoform 2 [Homo
sapiens]
gi|13432234|sp|P37231.3|PPARG_HUMAN RecName: Full=Peroxisome proliferator-activated receptor gamma;
Short=PPAR-gamma; AltName: Full=Nuclear receptor
subfamily 1 group C member 3
gi|1432177|gb|AAB04028.1| peroxisome proliferator activated receptor gamma 2 [Homo sapiens]
gi|1711117|gb|AAC51248.1| ligand activated transcription factor PPARgamma2 [Homo sapiens]
gi|119584528|gb|EAW64124.1| peroxisome proliferative activated receptor, gamma, isoform CRA_b
[Homo sapiens]
gi|197692375|dbj|BAG70151.1| peroxisome proliferative activated receptor gamma isoform 2 [Homo
sapiens]
gi|197692673|dbj|BAG70300.1| peroxisome proliferative activated receptor gamma isoform 2 [Homo
sapiens]
Length = 505
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|348507669|ref|XP_003441378.1| PREDICTED: nuclear receptor subfamily 1 group D member 1-like
[Oreochromis niloticus]
Length = 597
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 47/76 (61%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C+I + NR C+ CR +
Sbjct: 142 CKVCGDIASGFHYGVHACEGCKGFFRRSIQQNIHYKMCVKNENCLIMRMNRNRCQHCRFK 201
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 202 KCLSVGMSRDAVRFGR 217
>gi|293628874|dbj|BAJ05031.1| estrogen receptor alpha [Amietophrynus rangeri]
Length = 580
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 7/96 (7%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 177 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 232
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQ 97
RLRKC VGM K G R RR H +++Q Q
Sbjct: 233 RLRKCYEVGMMKGGIRKDRRGGRMIKHKRQKDEQDQ 268
>gi|181330916|ref|NP_001116766.1| nuclear receptor subfamily 2 group C member 2 [Danio rerio]
Length = 623
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +C+INK +R C+ CR
Sbjct: 145 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKSLTYS-CRSNQDCVINKHHRNRCQFCR 203
Query: 63 LRKCLMVGMSKSGSRYGRR 81
LRKCL +GM + R+
Sbjct: 204 LRKCLEMGMKMESVQSERK 222
>gi|115529272|ref|NP_001070169.1| estrogen receptor [Taeniopygia guttata]
gi|6015119|sp|Q91250.1|ESR1_TAEGU RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha;
AltName: Full=Estradiol receptor; AltName: Full=Nuclear
receptor subfamily 3 group A member 1
gi|1449146|gb|AAB81108.1| estrogen receptor [Taeniopygia guttata]
Length = 587
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 13/103 (12%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 177 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 232
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
RLRKC VGM K G R RR + +Q++Q E+Q R
Sbjct: 233 RLRKCYEVGMMKGGIRKDRRGG------RVMKQKRQREEQDSR 269
>gi|325930187|gb|ADZ45552.1| retinoid X receptor gamma [Taeniopygia guttata]
Length = 468
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 12/108 (11%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+ CR +
Sbjct: 144 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQYCRYQ 202
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
KCL +GM + + R Q ++++E + E T G D+
Sbjct: 203 KCLAMGMKREAVQEER-----------QRSRERSENEAESTSSGSEDM 239
>gi|293629043|dbj|BAF34908.2| estrogen receptor [Mytilus galloprovincialis]
Length = 452
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSC 61
N+ C+VC + A+GFH+G ++CEGCK+FF RS P C N C I+K R SC++C
Sbjct: 107 NKLCQVCSDNASGFHYGVWSCEGCKAFFKRSIQG-PVDYVCPATNSCTIDKHRRKSCQAC 165
Query: 62 RLRKCLMVGMSKSGSRYGRR 81
RLRKC VGM+K R R+
Sbjct: 166 RLRKCYEVGMNKGTQRKERK 185
>gi|371940918|ref|NP_001243138.1| retinoic acid receptor RXR-gamma [Taeniopygia guttata]
Length = 468
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 12/108 (11%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+ CR +
Sbjct: 144 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQYCRYQ 202
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
KCL +GM + + R Q ++++E + E T G D+
Sbjct: 203 KCLAMGMKREAVQEER-----------QRSRERSENEAESTSSGSEDM 239
>gi|301616152|ref|XP_002937524.1| PREDICTED: nuclear receptor ROR-alpha-like [Xenopus (Silurana)
tropicalis]
Length = 464
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 18 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 76
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KCL VGMS+ ++GR S + + Q+ + +QQ +
Sbjct: 77 KCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQRD 115
>gi|84619482|emb|CAD67997.1| putative estrogen receptor beta2 protein [Varicorhinus barbatulus]
Length = 558
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 39/78 (50%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 160 CAVCGDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 218
Query: 65 KCLMVGMSKSGSRYGRRS 82
KC VGM K G R R S
Sbjct: 219 KCYEVGMMKCGLRRDRGS 236
>gi|410899438|ref|XP_003963204.1| PREDICTED: nuclear receptor subfamily 1 group D member 2-like
[Takifugu rubripes]
Length = 545
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 48/76 (63%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS + C N C+I + NR C+ CR +
Sbjct: 88 CKVCGDIASGFHYGVHACEGCKGFFRRSIQQNINYKMCVKNENCLIMRMNRNRCQHCRFK 147
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 148 KCLSVGMSRDAVRFGR 163
>gi|195135300|ref|XP_002012072.1| GI16634 [Drosophila mojavensis]
gi|193918336|gb|EDW17203.1| GI16634 [Drosophila mojavensis]
Length = 491
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 5/123 (4%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M + C VCG+ A+G+H+G +CE CK+FF R+ + C NNEC INK+ R +C++
Sbjct: 110 MRRLCLVCGDVASGYHYGVASCEACKAFFKRTIQGNIEYT-CPANNECEINKRRRKACQA 168
Query: 61 CRLRKCLMVGMSKSGSRYGR----RSNWFKIHCLLQEQQQQAEQQTERTKLGHPDLLLKL 116
CR +KCL++GM K G R R R + + Q Q Q+ T LG +L L
Sbjct: 169 CRFQKCLLMGMLKEGVRLDRVRGGRQKYRRNPVSNSYQTMQLLYQSSTTSLGDVKILDVL 228
Query: 117 DKF 119
+ +
Sbjct: 229 NSY 231
>gi|440893234|gb|ELR46081.1| Nuclear receptor subfamily 2 group F member 6, partial [Bos
grunniens mutus]
Length = 441
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ ++G H+G FTCEGCKSFF RS S + C++N +C I++ +R C+ CRL+
Sbjct: 87 CVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYT-CRSNRDCQIDQHHRNQCQYCRLK 145
Query: 65 KCLMVGMSKSGS 76
KC VGM K G+
Sbjct: 146 KCFRVGMRKEGT 157
>gi|1490314|emb|CAA62153.1| peroxisome proliferator activated receptor gamma [Homo sapiens]
gi|48762805|gb|AAN38992.2| peroxisome proliferative activated receptor gamma [Homo sapiens]
gi|60819360|gb|AAX36497.1| peroxisome proliferative activated receptor gamma [synthetic
construct]
gi|61363113|gb|AAX42337.1| peroxisome proliferative activated receptor gamma [synthetic
construct]
gi|158254594|dbj|BAF83270.1| unnamed protein product [Homo sapiens]
Length = 475
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|348553941|ref|XP_003462784.1| PREDICTED: peroxisome proliferator-activated receptor gamma-like
[Cavia porcellus]
Length = 535
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 165 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 222
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 223 CRFQKCLAVGMSHNAIRFGR 242
>gi|116284368|ref|NP_005028.4| peroxisome proliferator-activated receptor gamma isoform 1 [Homo
sapiens]
gi|116284370|ref|NP_619726.2| peroxisome proliferator-activated receptor gamma isoform 1 [Homo
sapiens]
gi|116284373|ref|NP_619725.2| peroxisome proliferator-activated receptor gamma isoform 1 [Homo
sapiens]
gi|1490313|emb|CAA62152.1| peroxisome proliferator activated receptor gamma [Homo sapiens]
gi|13905056|gb|AAH06811.1| Peroxisome proliferator-activated receptor gamma [Homo sapiens]
gi|17978516|gb|AAA80314.2| peroxisome proliferator activated receptor gamma [Homo sapiens]
gi|30583401|gb|AAP35945.1| peroxisome proliferative activated receptor, gamma [Homo sapiens]
gi|60654873|gb|AAX32001.1| peroxisome proliferative activated receptor gamma [synthetic
construct]
gi|119584527|gb|EAW64123.1| peroxisome proliferative activated receptor, gamma, isoform CRA_a
[Homo sapiens]
gi|123980410|gb|ABM82034.1| peroxisome proliferative activated receptor, gamma [synthetic
construct]
gi|123995227|gb|ABM85215.1| peroxisome proliferative activated receptor, gamma [synthetic
construct]
gi|261859986|dbj|BAI46515.1| peroxisome proliferator-activated receptor gamma [synthetic
construct]
gi|283132454|dbj|BAI63629.1| peroxisome proliferative activated receptor gamma isoform 6 variant
[Homo sapiens]
gi|325495543|gb|ADZ17377.1| peroxisome proliferator-activated nuclear receptor gamma variant 1
[Homo sapiens]
gi|428229099|dbj|BAM71699.1| peroxisome proliferative activated receptor gamma [Homo sapiens]
Length = 477
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 107 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 164
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 165 CRFQKCLAVGMSHNAIRFGR 184
>gi|225735542|dbj|BAF34366.2| estrogen receptor [Mytilus edulis]
Length = 469
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSC 61
N+ C+VC + A+GFH+G ++CEGCK+FF RS P C N C I+K R SC++C
Sbjct: 116 NKLCQVCSDNASGFHYGVWSCEGCKAFFKRSIQG-PVDYVCPATNSCTIDKHRRKSCQAC 174
Query: 62 RLRKCLMVGMSKSGSRYGRR 81
RLRKC VGM+K R R+
Sbjct: 175 RLRKCYEVGMNKGTQRKERK 194
>gi|332237307|ref|XP_003267845.1| PREDICTED: estrogen receptor beta isoform 4 [Nomascus leucogenys]
Length = 526
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 208 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHC 241
>gi|300676917|gb|ADK26789.1| estrogen receptor 1 [Zonotrichia albicollis]
Length = 587
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 13/103 (12%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 177 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 232
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
RLRKC VGM K G R RR + +Q++Q E+Q R
Sbjct: 233 RLRKCYEVGMMKGGIRKDRRGG------RVMKQKRQREEQDSR 269
>gi|378705842|gb|AFC34773.1| RORgamma1 [Ctenopharyngodon idella]
Length = 479
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+ TCEGCK FF RS N +I C C+I++ NR C+ CRL+
Sbjct: 10 CKICGDKSSGIHYRVITCEGCKGFFRRSQQN-NAIYSCSRQRNCLIDRTNRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRSNWFK--IHCLLQEQQQQAEQ 100
KCL +GMS+ ++GR S + ++ +Q+ QQ E+
Sbjct: 69 KCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQER 106
>gi|350590999|ref|XP_003358388.2| PREDICTED: nuclear receptor subfamily 1 group D member 2 [Sus
scrofa]
Length = 804
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 329 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 388
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 389 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 418
>gi|308387346|ref|NP_001184140.1| peroxisome proliferator-activated receptor alpha [Oncorhynchus
mykiss]
gi|307751334|gb|ADN92684.1| peroxisome proliferator-activated receptor alpha [Oncorhynchus
mykiss]
Length = 464
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 10/110 (9%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VC + A+G+H+G CEGCK FF R+ +C+ + C I KKNR C+
Sbjct: 93 LNLECRVCADRASGYHYGVHACEGCKGFFRRTIRLKLEYDKCERH--CKIQKKNRNKCQY 150
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQ--------EQQQQAEQQT 102
CR +KCL VGMS + R+GR K+ + E QQA+Q+T
Sbjct: 151 CRFQKCLSVGMSHNAIRFGRMPQSEKLKLKAEILTGDREVEDPQQADQKT 200
>gi|441594984|ref|XP_004087201.1| PREDICTED: estrogen receptor beta [Nomascus leucogenys]
Length = 474
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 208 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHC 241
>gi|454001|gb|AAC52134.1| peroxisome proliferator activated receptor gamma [Mus musculus]
Length = 475
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|2605497|dbj|BAA23354.1| peroxisome proliferator activated-receptor gamma [Homo sapiens]
Length = 474
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 107 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 164
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 165 CRFQKCLAVGMSHNAIRFGR 184
>gi|397511915|ref|XP_003826307.1| PREDICTED: peroxisome proliferator-activated receptor gamma isoform
2 [Pan paniscus]
Length = 477
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 107 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 164
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 165 CRFQKCLAVGMSHNAIRFGR 184
>gi|345315448|ref|XP_001511889.2| PREDICTED: estrogen receptor beta-like [Ornithorhynchus anatinus]
Length = 700
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS + C N+C I+K R SC+SCRLR
Sbjct: 177 CAVCRDYASGYHYGVWSCEGCKAFFKRSIQGQNNYI-CPATNQCTIDKNRRKSCQSCRLR 235
Query: 65 KCLMVGMSKSGSRYGR 80
+C VGM K GSR R
Sbjct: 236 RCYEVGMMKCGSRRER 251
>gi|410036561|ref|XP_003950079.1| PREDICTED: peroxisome proliferator-activated receptor gamma [Pan
troglodytes]
gi|426339482|ref|XP_004033679.1| PREDICTED: peroxisome proliferator-activated receptor gamma isoform
1 [Gorilla gorilla gorilla]
gi|426339486|ref|XP_004033681.1| PREDICTED: peroxisome proliferator-activated receptor gamma isoform
3 [Gorilla gorilla gorilla]
Length = 477
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 107 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 164
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 165 CRFQKCLAVGMSHNAIRFGR 184
>gi|428673531|ref|NP_001258805.1| estrogen receptor beta isoform 5 [Homo sapiens]
Length = 474
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 208 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHC 241
>gi|1912468|gb|AAB51132.1| estrogen receptor beta [Mus musculus]
Length = 485
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 24/145 (16%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 104 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----ICPATNQCTIDKNRRKSCQAC 159
Query: 62 RLRKCLMVGMSKSGSRYGR---------RSNWFKIHCLLQEQQQQAEQQTERTK------ 106
RLRKC VGM K GSR R RS ++HCL + ++ T R K
Sbjct: 160 RLRKCYEVGMVKCGSRRERCGYRIVRRQRSASEQVHCL--NKAKRTSGHTPRVKELLLNS 217
Query: 107 LGHPDLLLKLDKFTNNNTIVTNNNL 131
L L+L L + N +V+ ++
Sbjct: 218 LSPEQLVLTLLEAEPPNVLVSRPSM 242
>gi|63102362|gb|AAH95127.1| Nr1d1 protein, partial [Danio rerio]
Length = 511
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 47/76 (61%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 121 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNETCTIMRINRNRCQQCRFK 180
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 181 KCLSVGMSRDAVRFGR 196
>gi|57619192|ref|NP_001009737.1| estrogen receptor beta [Ovis aries]
gi|13124234|sp|Q9TU15.1|ESR2_SHEEP RecName: Full=Estrogen receptor beta; Short=ER-beta; AltName:
Full=Nuclear receptor subfamily 3 group A member 2
gi|5911383|gb|AAD55772.1|AF177936_1 estrogen receptor beta [Ovis aries]
Length = 527
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 43/103 (41%), Positives = 61/103 (59%), Gaps = 10/103 (9%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 146 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 204
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHCLLQEQQQQA 98
KC VGM K GSR R R++ ++HCL + ++ A
Sbjct: 205 KCYEVGMVKCGSRRERCGYRIVRRQRNSDEQLHCLSKTKRNGA 247
>gi|45925833|gb|AAS79101.1| transcription factor E75A [Plodia interpunctella]
Length = 123
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 47 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 106
Query: 65 KCLMVGMSKSGSRYGR 80
KC+ VGMS+ R+GR
Sbjct: 107 KCIAVGMSRDAVRFGR 122
>gi|393908442|gb|EJD75059.1| hypothetical protein LOAG_17726 [Loa loa]
Length = 251
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 63/99 (63%), Gaps = 3/99 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS + L + +C +CI+++ NR C+ CRL+
Sbjct: 17 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTLNNY-QCPRQQKCIVDRVNRNRCQYCRLK 75
Query: 65 KCLMVGMSKSGSRYGRRS--NWFKIHCLLQEQQQQAEQQ 101
KCL +GMS+ ++GR S K+ ++ +Q AE Q
Sbjct: 76 KCLELGMSRDAVKFGRMSKKQREKVEDEVRMHKQMAEVQ 114
>gi|380447797|gb|AFD54081.1| peroxisome proliferator-activated receptor alpha [Bubalus bubalis]
Length = 470
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C++CG+ A+G+H+G + CEGCK FF R+ +C + C I KKNR C+
Sbjct: 100 LNIECRICGDKASGYHYGVYACEGCKGFFRRTIRLKLVYDKC--DRSCKIQKKNRNKCQY 157
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR KCL VGMS + R+GR
Sbjct: 158 CRFHKCLSVGMSHNAIRFGR 177
>gi|356892262|gb|AET41699.1| peroxisome proliferator-activated receptor gamma [Bubalus bubalis]
Length = 449
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 79 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 136
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 137 CRFQKCLAVGMSHNAIRFGR 156
>gi|338714446|ref|XP_001492461.2| PREDICTED: peroxisome proliferator-activated receptor gamma-like
isoform 1 [Equus caballus]
Length = 528
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 158 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 215
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 216 CRFQKCLAVGMSHNAIRFGR 235
>gi|195126627|ref|XP_002007772.1| GI13134 [Drosophila mojavensis]
gi|193919381|gb|EDW18248.1| GI13134 [Drosophila mojavensis]
Length = 569
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+G+H+G +CEGCK FF RS C + +C++ + NR C+ CR +
Sbjct: 79 CKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEY-RCLRDGKCLVIRLNRNRCQYCRFK 137
Query: 65 KCLMVGMSKSGSRYGR 80
KCL GMS+ RYGR
Sbjct: 138 KCLSAGMSRDSVRYGR 153
>gi|410930596|ref|XP_003978684.1| PREDICTED: estrogen receptor beta-like [Takifugu rubripes]
Length = 634
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 7/79 (8%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +NN C N+C I+K R SC++C
Sbjct: 159 CAVCHDYASGYHYGVWSCEGCKAFFKRSIQGHNNYI----CPATNQCTIDKNRRKSCQAC 214
Query: 62 RLRKCLMVGMSKSGSRYGR 80
RLRKC VGM K G R R
Sbjct: 215 RLRKCYEVGMMKCGVRRER 233
>gi|395537657|ref|XP_003770810.1| PREDICTED: peroxisome proliferator-activated receptor alpha
[Sarcophilus harrisii]
Length = 468
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C++CG+ A+G+H+G CEGCK FF R+ + +C + C I KKNR C+
Sbjct: 98 LNIECRICGDKASGYHYGVHACEGCKGFFRRTIRLKLAYDKC--DRSCKIQKKNRNKCQY 155
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 156 CRFQKCLSVGMSHNAIRFGR 175
>gi|126338762|ref|XP_001364221.1| PREDICTED: peroxisome proliferator-activated receptor alpha-like
[Monodelphis domestica]
Length = 468
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C++CG+ A+G+H+G CEGCK FF R+ + +C + C I KKNR C+
Sbjct: 98 LNIECRICGDKASGYHYGVHACEGCKGFFRRTIRLKLAYDKC--DRSCKIQKKNRNKCQY 155
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 156 CRFQKCLSVGMSHNAIRFGR 175
>gi|164633044|gb|ABY64735.1| estrogen receptor beta [Ateles paniscus]
Length = 530
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 44/97 (45%), Positives = 58/97 (59%), Gaps = 7/97 (7%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQ 101
KC VGM K GSR R ++ L +Q AEQQ
Sbjct: 208 KCYEVGMVKCGSR--RERCGYR----LVRRQGNAEQQ 238
>gi|407830501|gb|AFU35773.1| estrogen receptor beta 2 [Carassius auratus ssp. 'Pengze']
Length = 569
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 43/103 (41%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 170 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 228
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKL 107
KC VGM K G R R S QQ+ QQ T+
Sbjct: 229 KCYEVGMMKCGLRRDRSS-----------YQQRGAQQNRLTRF 260
>gi|695709|emb|CAA55014.1| Rev-erb-Beta2 [Rattus norvegicus]
gi|149040002|gb|EDL94086.1| nuclear receptor subfamily 1, group D, member 2, isoform CRA_b
[Rattus norvegicus]
Length = 383
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>gi|269931467|gb|ACZ54253.1| estrogen receptor 1, partial [Stenella coeruleoalba]
Length = 205
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 45 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 103
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQ---EQQQQAEQQTER--TKLGHPDLLLKLDKF 119
KC VGM K G R RR H + E + +AE +R L LL+K K
Sbjct: 104 KCYEVGMMKGGIRKDRRGGRMLKHKRQRDDGEGRNEAEPSGDRRSANLWPSPLLIKHTKK 163
Query: 120 TNNNTIVTNNNLILQLLQ 137
+ +T + +I LL+
Sbjct: 164 NSPVLSLTADQMISALLE 181
>gi|431899941|gb|ELK07888.1| Peroxisome proliferator-activated receptor gamma [Pteropus alecto]
Length = 556
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>gi|12230057|sp|Q9YH33.1|ESR1_ORENI RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha;
AltName: Full=Estradiol receptor; AltName: Full=Nuclear
receptor subfamily 3 group A member 1
gi|4098199|gb|AAD00245.1| type I estrogen receptor [Oreochromis niloticus]
Length = 585
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 139 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 197
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 198 KCYEVGMMKGGMRKDR 213
>gi|334338609|ref|XP_001376147.2| PREDICTED: peroxisome proliferator-activated receptor gamma-like
[Monodelphis domestica]
Length = 475
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|41386649|dbj|BAD08348.1| estrogen receptor a [Alligator mississippiensis]
Length = 587
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 12/99 (12%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 179 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 234
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQ 100
RLRKC VGM K G R RR +L++++Q+ EQ
Sbjct: 235 RLRKCYEVGMMKGGIRKDRRGGR-----MLKQKRQREEQ 268
>gi|22219446|ref|NP_671743.1| nuclear receptor subfamily 1 group D member 2 [Rattus norvegicus]
gi|758418|gb|AAA64750.1| orphan nuclear receptor HZF-2 [Rattus norvegicus]
Length = 494
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 18 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 77
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 78 KCLSVGMSRDRVRFGRIPKREKQRMLIEMQ 107
>gi|17827179|dbj|BAB79436.1| estrogen receptor [Caiman crocodilus]
Length = 587
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 12/99 (12%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 179 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 234
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQ 100
RLRKC VGM K G R RR +L++++Q+ EQ
Sbjct: 235 RLRKCYEVGMMKGGIRKDRRGG-----RMLKQKRQREEQ 268
>gi|3091286|gb|AAC15234.1| estrogen receptor beta 3 isoform [Homo sapiens]
Length = 513
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 208 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHC 241
>gi|5804932|emb|CAB53540.1| Rev-ErbAalpha protein [Homo sapiens]
Length = 614
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 132 CKVCGDVASGFHYGVLACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 191
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 192 KCLSVGMSRDAVRFGR 207
>gi|14090242|dbj|BAB55582.1| seven-up alpha [Bombyx mori]
Length = 421
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSC 61
N C VCG+ ++G H+G FTCEGCKSFF RS + S C+ N C I++ +R C+ C
Sbjct: 77 NVECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYS-CRGNRSCPIDQHHRNQCQFC 135
Query: 62 RLRKCLMVGMSKSGSRYGR 80
RLRKCL +GM + + GR
Sbjct: 136 RLRKCLKMGMRREAVQRGR 154
>gi|444730607|gb|ELW70985.1| Retinoic acid receptor RXR-gamma [Tupaia chinensis]
Length = 425
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ + C+++ +C+I+K+ R C+
Sbjct: 97 VKHVCAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLVYTCRDSKDCLIDKRQRNRCQY 155
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++A+ + E T GH D+
Sbjct: 156 CRYQKCLVMGMKREAVQEER-----------QRSRERADSEVECTSGGHEDM 196
>gi|432910618|ref|XP_004078441.1| PREDICTED: nuclear receptor subfamily 1 group D member 2-like
[Oryzias latipes]
Length = 566
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 51/90 (56%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C C I + NR C+ CR +
Sbjct: 92 CKVCGDMASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKMENCTIMRINRNRCQQCRFK 151
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K LL+ Q
Sbjct: 152 KCLAVGMSRDAVRFGRIPKREKQRMLLEMQ 181
>gi|211926876|dbj|BAG82651.1| estrogen receptor alpha2 [Acipenser schrenckii]
Length = 533
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 12/122 (9%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 149 CVVCCDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 204
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDLLLKLDKFTN 121
RLRKC VGM K G R RR +L+ +++ EQ + H L L L+
Sbjct: 205 RLRKCYEVGMMKGGVRKDRRGR-----PMLKVKRKAGEQDEKSHGDSHDRLTLALEPTPV 259
Query: 122 NN 123
NN
Sbjct: 260 NN 261
>gi|108736126|gb|ABG00286.1| estrogen receptor [Octopus vulgaris]
Length = 488
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VC + A+GFH+G ++CEGCK+FF RS P C N C I+K R SC++CRLR
Sbjct: 134 CQVCDDNASGFHYGVWSCEGCKAFFKRSIQG-PVDYVCPATNSCTIDKHRRKSCQACRLR 192
Query: 65 KCLMVGMSKSGSRYGRR 81
KC VGM+K R R+
Sbjct: 193 KCYEVGMNKGSQRKERK 209
>gi|61651602|dbj|BAD91174.1| estrogen receptor beta2 [Rattus norvegicus]
gi|149051477|gb|EDM03650.1| estrogen receptor 2 beta, isoform CRA_a [Rattus norvegicus]
Length = 567
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 16/98 (16%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 168 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----ICPATNQCTIDKNRRKSCQAC 223
Query: 62 RLRKCLMVGMSKSGSRYGR---------RSNWFKIHCL 90
RLRKC VGM K GSR R RS+ ++HCL
Sbjct: 224 RLRKCYEVGMVKCGSRRERCGYRIVRRQRSSSEQVHCL 261
>gi|47217403|emb|CAG00763.1| unnamed protein product [Tetraodon nigroviridis]
Length = 432
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ ++G H+G F+CEGCKSFF RS + S C++N EC I++ +R C+ CRL+
Sbjct: 53 CVVCGDKSSGKHYGVFSCEGCKSFFKRSIRRNLNYS-CRSNRECQIDQHHRNQCQYCRLK 111
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K + GR
Sbjct: 112 KCFRVGMRKEAVQRGR 127
>gi|395516634|ref|XP_003762492.1| PREDICTED: peroxisome proliferator-activated receptor gamma
[Sarcophilus harrisii]
Length = 475
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|291406564|ref|XP_002719581.1| PREDICTED: estrogen receptor beta [Oryctolagus cuniculus]
Length = 542
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/93 (44%), Positives = 55/93 (59%), Gaps = 9/93 (9%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 166 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 224
Query: 65 KCLMVGMSKSGSR--------YGRRSNWFKIHC 89
KC VGM K GSR RR + ++HC
Sbjct: 225 KCYEVGMVKCGSRRERCGYRIVRRRRSSGELHC 257
>gi|301756709|ref|XP_002914206.1| PREDICTED: estrogen receptor beta-like [Ailuropoda melanoleuca]
gi|281347241|gb|EFB22825.1| hypothetical protein PANDA_002067 [Ailuropoda melanoleuca]
Length = 531
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 60/100 (60%), Gaps = 10/100 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHCLLQEQQ 95
KC VGM K GSR R +S+ ++HCL + ++
Sbjct: 208 KCYEVGMVKCGSRRERCGYRVMRRQKSSDEQLHCLSKAKK 247
>gi|326915742|ref|XP_003204172.1| PREDICTED: estrogen receptor-like [Meleagris gallopavo]
Length = 589
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 13/103 (12%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 179 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 234
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
RLRKC VGM K G R RR + +Q++Q E Q R
Sbjct: 235 RLRKCYEVGMMKGGIRKDRRGG------RMMKQKRQREDQDSR 271
>gi|126723352|ref|NP_001075617.1| peroxisome proliferator-activated receptor gamma [Oryctolagus
cuniculus]
gi|27501686|gb|AAO13014.1| PPAR gamma 1 [Oryctolagus cuniculus]
gi|27501688|gb|AAO13015.1| PPAR gamma 3 [Oryctolagus cuniculus]
Length = 475
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRPIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|345323246|ref|XP_001508165.2| PREDICTED: peroxisome proliferator-activated receptor alpha-like
[Ornithorhynchus anatinus]
Length = 446
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C++CG+ A+G+H+G CEGCK FF R+ + +C + C I KKNR C+
Sbjct: 75 LNIECRICGDKASGYHYGVHACEGCKGFFRRTIRLKLAYDKC--DRTCKIQKKNRNKCQY 132
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 133 CRFQKCLSVGMSHNAIRFGR 152
>gi|344236487|gb|EGV92590.1| Nuclear receptor ROR-alpha [Cricetulus griseus]
Length = 959
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 15 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 73
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 74 KCLAVGMSRDAVKFGRMS 91
>gi|47824801|emb|CAD33851.1| estrogen receptor beta 1 [Dicentrarchus labrax]
Length = 517
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/109 (39%), Positives = 63/109 (57%), Gaps = 8/109 (7%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C NEC I+K R SC++CRLR
Sbjct: 113 CAVCHDYASGYHYGVWSCEGCKAFFKRSIQRHNDYI-CPATNECTIDKNRRKSCQACRLR 171
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDLL 113
KC VGM+K G R R N+ Q ++ + + +++ PD+L
Sbjct: 172 KCYEVGMTKCGMR-KERGNY------KNPQTRRVTRLSSQSRTHGPDVL 213
>gi|162605563|gb|ABY19510.1| estrogen receptor alpha [Odontesthes bonariensis]
Length = 602
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I++ R SC++CRLR
Sbjct: 187 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDRNRRKSCQACRLR 245
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 246 KCYEVGMMKGGVRKDR 261
>gi|348524941|ref|XP_003449981.1| PREDICTED: estrogen receptor [Oreochromis niloticus]
Length = 632
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 186 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 244
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 245 KCYEVGMMKGGMRKDR 260
>gi|212277034|gb|ACJ22907.1| estrogen receptor alpha 1, partial [Bombina orientalis]
Length = 236
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 64/102 (62%), Gaps = 12/102 (11%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 58 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 113
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
RLRKC VGM K G R RR +++ ++Q+ EQ+T+
Sbjct: 114 RLRKCYEVGMMKGGIRKERRGGR-----MIKHKRQKEEQETK 150
>gi|432112965|gb|ELK35547.1| Estrogen receptor beta [Myotis davidii]
Length = 575
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/97 (44%), Positives = 56/97 (57%), Gaps = 10/97 (10%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CR
Sbjct: 194 HVCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACR 252
Query: 63 LRKCLMVGMSKSGSRYGR---------RSNWFKIHCL 90
LRKC VGM K GSR R RS ++HCL
Sbjct: 253 LRKCYEVGMVKCGSRRERCGYRIVRRQRSPDEQLHCL 289
>gi|13124244|sp|Q9W669.1|ESR21_CARAU RecName: Full=Estrogen receptor beta-1; Short=ER-beta-1; AltName:
Full=Nuclear receptor subfamily 3 group A member 2-A
gi|4666318|gb|AAD26921.1|AF061269_1 estrogen receptor beta [Carassius auratus]
Length = 568
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/103 (41%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 170 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 228
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKL 107
KC VGM K G R R S QQ+ QQ T+
Sbjct: 229 KCYEVGMMKCGLRRDRSS-----------YQQRGAQQNRLTRF 260
>gi|253721474|gb|ACT33953.1| estrogen receptor beta transcript variant 2 [Cervus elaphus]
Length = 527
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 60/100 (60%), Gaps = 10/100 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 146 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 204
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHCLLQEQQ 95
KC VGM K GSR R R++ ++HCL + ++
Sbjct: 205 KCYEVGMVKCGSRRERCGYRIVRRQRNSDEQLHCLSKTKR 244
>gi|253721472|gb|ACT33952.1| estrogen receptor beta transcript variant 1 [Cervus elaphus]
Length = 527
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 60/100 (60%), Gaps = 10/100 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 146 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 204
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHCLLQEQQ 95
KC VGM K GSR R R++ ++HCL + ++
Sbjct: 205 KCYEVGMVKCGSRRERCGYRIVRRQRNSDEQLHCLSKTKR 244
>gi|345804469|ref|XP_866134.2| PREDICTED: estrogen receptor beta isoform 24 [Canis lupus
familiaris]
Length = 530
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 60/100 (60%), Gaps = 10/100 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHCLLQEQQ 95
KC VGM K GSR R +S+ ++HCL + ++
Sbjct: 208 KCYEVGMVKCGSRRERCGYRVMRRQKSSDEQLHCLSKAKK 247
>gi|195375265|ref|XP_002046422.1| GJ12889 [Drosophila virilis]
gi|194153580|gb|EDW68764.1| GJ12889 [Drosophila virilis]
Length = 503
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M + C VCG+ A+GFH+G +CE CK+FF R+ + C NNEC INK+ R +C++
Sbjct: 121 MRRLCLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYT-CPANNECEINKRRRKACQA 179
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL++GM K G R R
Sbjct: 180 CRFQKCLLMGMLKEGVRLDR 199
>gi|126308170|ref|XP_001370296.1| PREDICTED: nuclear receptor subfamily 1 group D member 1
[Monodelphis domestica]
Length = 622
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 47/76 (61%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 139 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNESCSIIRINRNRCQQCRFK 198
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 199 KCLSVGMSRDAVRFGR 214
>gi|61651600|dbj|BAD91173.1| estrogen receptor beta1 [Rattus norvegicus]
gi|149051479|gb|EDM03652.1| estrogen receptor 2 beta, isoform CRA_c [Rattus norvegicus]
Length = 549
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 16/98 (16%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 168 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----ICPATNQCTIDKNRRKSCQAC 223
Query: 62 RLRKCLMVGMSKSGSRYGR---------RSNWFKIHCL 90
RLRKC VGM K GSR R RS+ ++HCL
Sbjct: 224 RLRKCYEVGMVKCGSRRERCGYRIVRRQRSSSEQVHCL 261
>gi|158828574|dbj|BAF91191.1| estrogen receptor alpha [Pseudemys nelsoni]
Length = 587
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 63/111 (56%), Gaps = 8/111 (7%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 179 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 234
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
RLRKC VGM K G R RR H Q ++Q A T++ P L
Sbjct: 235 RLRKCYEVGMMKGGIRKDRRGGRMLKHK-RQREEQDARIAGTSTEMRTPTL 284
>gi|156720239|dbj|BAF76770.1| estorgen receptor alpha [Gambusia affinis]
Length = 621
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 7/104 (6%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I++ R SC++CRLR
Sbjct: 192 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDRNRRKSCQACRLR 250
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLG 108
KC VGM K G R R L ++++Q E+T G
Sbjct: 251 KCYEVGMMKGGVRKDRG------RVLQRDKRQTGVSDREKTGKG 288
>gi|348534186|ref|XP_003454584.1| PREDICTED: peroxisome proliferator-activated receptor gamma-like
isoform 1 [Oreochromis niloticus]
Length = 537
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VCG+ A+GFH+G CEGCK FF R+ C + C I+KK+R C+
Sbjct: 128 LNIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLVYDHC--DLHCRIHKKSRNKCQY 185
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 186 CRFQKCLNVGMSHNAIRFGR 205
>gi|119353106|gb|ABL64074.1| estrogen receptor beta-a [Perca flavescens]
Length = 555
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 163 CAVCNDHASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 221
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM+K G R R
Sbjct: 222 KCCEVGMTKCGMRKER 237
>gi|6677829|ref|NP_033133.1| retinoic acid receptor RXR-gamma isoform 1 [Mus musculus]
gi|1350914|sp|P28705.2|RXRG_MOUSE RecName: Full=Retinoic acid receptor RXR-gamma; AltName:
Full=Nuclear receptor subfamily 2 group B member 3;
AltName: Full=Retinoid X receptor gamma
gi|200882|gb|AAA40082.1| retinoid X receptor-gamma [Mus musculus]
gi|386367|gb|AAB27244.1| retinoid-X receptor-gamma isoform 1 [Mus sp.]
gi|34849539|gb|AAH58401.1| Retinoid X receptor gamma [Mus musculus]
gi|148707231|gb|EDL39178.1| retinoid X receptor gamma [Mus musculus]
Length = 463
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E H D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECASSSHEDM 234
>gi|2801691|gb|AAB97424.1| estrogen receptor beta1 [Rattus norvegicus]
Length = 485
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 16/98 (16%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 104 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----ICPATNQCTIDKNRRKSCQAC 159
Query: 62 RLRKCLMVGMSKSGSRYGR---------RSNWFKIHCL 90
RLRKC VGM K GSR R RS+ ++HCL
Sbjct: 160 RLRKCYEVGMVKCGSRRERCGYRIVRRQRSSSEQVHCL 197
>gi|34223729|sp|P45447.3|E78C_DROME RecName: Full=Ecdysone-induced protein 78C; Short=DR-78; AltName:
Full=Nuclear receptor subfamily 1 group E member 1
Length = 866
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+G+H+G +CEGCK FF RS C + +C++ + NR C+ CR +
Sbjct: 367 CKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEY-RCLRDGKCLVIRLNRNRCQYCRFK 425
Query: 65 KCLMVGMSKSGSRYGR 80
KCL GMS+ RYGR
Sbjct: 426 KCLSAGMSRDSVRYGR 441
>gi|514833|gb|AAA19975.1| nuclear hormone receptor superfamily protein [Drosophila
melanogaster]
Length = 864
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+G+H+G +CEGCK FF RS C + +C++ + NR C+ CR +
Sbjct: 367 CKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEY-RCLRDGKCLVIRLNRNRCQYCRFK 425
Query: 65 KCLMVGMSKSGSRYGR 80
KCL GMS+ RYGR
Sbjct: 426 KCLSAGMSRDSVRYGR 441
>gi|7769648|gb|AAF69494.1| nuclear receptor E78A [Drosophila melanogaster]
Length = 866
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+G+H+G +CEGCK FF RS C + +C++ + NR C+ CR +
Sbjct: 367 CKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEY-RCLRDGKCLVIRLNRNRCQYCRFK 425
Query: 65 KCLMVGMSKSGSRYGR 80
KCL GMS+ RYGR
Sbjct: 426 KCLSAGMSRDSVRYGR 441
>gi|24667937|ref|NP_524195.2| Ecdysone-induced protein 78C, isoform A [Drosophila melanogaster]
gi|386771542|ref|NP_001246862.1| Ecdysone-induced protein 78C, isoform D [Drosophila melanogaster]
gi|386771544|ref|NP_001246863.1| Ecdysone-induced protein 78C, isoform E [Drosophila melanogaster]
gi|23094217|gb|AAF51692.2| Ecdysone-induced protein 78C, isoform A [Drosophila melanogaster]
gi|383292049|gb|AFH04533.1| Ecdysone-induced protein 78C, isoform D [Drosophila melanogaster]
gi|383292050|gb|AFH04534.1| Ecdysone-induced protein 78C, isoform E [Drosophila melanogaster]
Length = 862
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+G+H+G +CEGCK FF RS C + +C++ + NR C+ CR +
Sbjct: 363 CKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEY-RCLRDGKCLVIRLNRNRCQYCRFK 421
Query: 65 KCLMVGMSKSGSRYGR 80
KCL GMS+ RYGR
Sbjct: 422 KCLSAGMSRDSVRYGR 437
>gi|185133653|ref|NP_001117032.1| peroxisome proliferator-activated receptor alpha [Salmo salar]
gi|89143253|emb|CAJ76702.1| peroxisome proliferator-activated receptor alpha [Salmo salar]
Length = 464
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 10/110 (9%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VC + A+G+H+G CEGCK FF R+ +C+ C I KKNR C+
Sbjct: 93 LNLECRVCADRASGYHYGVHACEGCKGFFRRTIRLKLEYDKCE--RRCKIQKKNRNKCQY 150
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQ--------EQQQQAEQQT 102
CR +KCL VGMS + R+GR K+ + E QQA+Q+T
Sbjct: 151 CRFQKCLSVGMSHNAIRFGRMPQSEKLKLKAEILTGDREVEDPQQADQKT 200
>gi|194875414|ref|XP_001973593.1| GG16168 [Drosophila erecta]
gi|190655376|gb|EDV52619.1| GG16168 [Drosophila erecta]
Length = 863
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+G+H+G +CEGCK FF RS C + +C++ + NR C+ CR +
Sbjct: 358 CKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEY-RCLRDGKCLVIRLNRNRCQYCRFK 416
Query: 65 KCLMVGMSKSGSRYGR 80
KCL GMS+ RYGR
Sbjct: 417 KCLSAGMSRDSVRYGR 432
>gi|2243140|emb|CAA67384.1| nuclear hormone receptor [Drosophila melanogaster]
Length = 865
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+G+H+G +CEGCK FF RS C + +C++ + NR C+ CR +
Sbjct: 367 CKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEY-RCLRDGKCLVIRLNRNRCQYCRFK 425
Query: 65 KCLMVGMSKSGSRYGR 80
KCL GMS+ RYGR
Sbjct: 426 KCLSAGMSRDSVRYGR 441
>gi|355768148|gb|EHH62688.1| V-erbA-related protein 1 [Macaca fascicularis]
Length = 614
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 131 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 190
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 191 KCLSVGMSRDAVRFGR 206
>gi|109804224|emb|CAK95869.1| estrogen receptor type I [Oreochromis mossambicus]
Length = 585
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 139 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 197
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 198 KCYEVGMMKGGMRKDR 213
>gi|164633048|gb|ABY64737.1| estrogen receptor beta [Pithecia pithecia]
Length = 530
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K GSR R
Sbjct: 208 KCYEVGMVKCGSRRER 223
>gi|13124208|sp|Q95171.2|ESR2_CALJA RecName: Full=Estrogen receptor beta; Short=ER-beta; AltName:
Full=Nuclear receptor subfamily 3 group A member 2
gi|6433824|emb|CAA70546.2| estrogen receptor beta [Callithrix jacchus]
Length = 530
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K GSR R
Sbjct: 208 KCYEVGMVKCGSRRER 223
>gi|164663891|ref|NP_665718.2| nuclear receptor subfamily 1 group D member 1 isoform 2 [Rattus
norvegicus]
gi|149054136|gb|EDM05953.1| nuclear receptor subfamily 1, group D, member 1, isoform CRA_a
[Rattus norvegicus]
Length = 508
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 26 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 85
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 86 KCLSVGMSRDAVRFGR 101
>gi|194747571|ref|XP_001956225.1| GF24702 [Drosophila ananassae]
gi|190623507|gb|EDV39031.1| GF24702 [Drosophila ananassae]
Length = 505
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M + C VCG+ A+GFH+G +CE CK+FF R+ + C NNEC INK+ R +C++
Sbjct: 128 MRRLCLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYT-CPANNECEINKRRRKACQA 186
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL++GM K G R R
Sbjct: 187 CRFQKCLLMGMLKEGVRLDR 206
>gi|449274063|gb|EMC83368.1| Nuclear receptor subfamily 2 group C member 2 [Columba livia]
Length = 596
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 115 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 173
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 174 LKKCLEMGMKMESVQSERK 192
>gi|6978817|ref|NP_036886.1| estrogen receptor beta [Rattus norvegicus]
gi|1373281|gb|AAC52602.1| estrogen receptor beta [Rattus norvegicus]
Length = 485
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 16/98 (16%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 104 CPVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----ICPATNQCTIDKNRRKSCQAC 159
Query: 62 RLRKCLMVGMSKSGSRYGR---------RSNWFKIHCL 90
RLRKC VGM K GSR R RS+ ++HCL
Sbjct: 160 RLRKCYEVGMVKCGSRRERCGYRIVRRQRSSSEQVHCL 197
>gi|402900086|ref|XP_003913011.1| PREDICTED: nuclear receptor subfamily 1 group D member 1 [Papio
anubis]
Length = 613
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 131 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 190
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 191 KCLSVGMSRDAVRFGR 206
>gi|380818212|gb|AFE80980.1| nuclear receptor subfamily 1 group D member 1 [Macaca mulatta]
gi|383423059|gb|AFH34743.1| nuclear receptor subfamily 1 group D member 1 [Macaca mulatta]
gi|384950492|gb|AFI38851.1| nuclear receptor subfamily 1 group D member 1 [Macaca mulatta]
Length = 613
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 131 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 190
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 191 KCLSVGMSRDAVRFGR 206
>gi|118344280|ref|NP_001071962.1| nuclear receptor [Ciona intestinalis]
gi|70571053|dbj|BAE06670.1| nuclear receptor [Ciona intestinalis]
Length = 597
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
++ CKVCG+ ++G H+G ++CEGCK FF R+ + C + C I K NR C++
Sbjct: 43 LDMPCKVCGDKSSGVHYGVYSCEGCKGFFRRTIHQKIKYRSCILDRTCSITKINRNRCQT 102
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR KCL VGMSK +YGR
Sbjct: 103 CRFMKCLYVGMSKDAVKYGR 122
>gi|164633050|gb|ABY64738.1| estrogen receptor beta [Callicebus donacophilus]
Length = 529
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 148 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 206
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K GSR R
Sbjct: 207 KCYEVGMVKCGSRRER 222
>gi|6166156|sp|Q62986.2|ESR2_RAT RecName: Full=Estrogen receptor beta; Short=ER-beta; AltName:
Full=Nuclear receptor subfamily 3 group A member 2
Length = 530
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 16/98 (16%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 149 CPVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----ICPATNQCTIDKNRRKSCQAC 204
Query: 62 RLRKCLMVGMSKSGSRYGR---------RSNWFKIHCL 90
RLRKC VGM K GSR R RS+ ++HCL
Sbjct: 205 RLRKCYEVGMVKCGSRRERCGYRIVRRQRSSSEQVHCL 242
>gi|410048538|ref|XP_003952591.1| PREDICTED: steroid hormone receptor ERR2 [Pan troglodytes]
Length = 500
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C NEC I K+ R SC++CR
Sbjct: 103 CLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYS-CPATNECEITKRRRKSCQACRFM 161
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 162 KCLKVGMLKEGVRLDR 177
>gi|417403318|gb|JAA48470.1| Putative nuclear receptor [Desmodus rotundus]
Length = 612
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 131 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 190
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 191 KCLSVGMSRDAVRFGR 206
>gi|164633038|gb|ABY64732.1| estrogen receptor beta [Trachypithecus obscurus]
Length = 530
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 208 KCYEVGMVKCGSRRDRCGYHLVRRQRSADEQLHC 241
>gi|347800086|dbj|BAK86419.1| estrogen receptor alpha [Poecilia reticulata]
Length = 621
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I++ R SC++CRLR
Sbjct: 192 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDRNRRKSCQACRLR 250
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 251 KCYEVGMMKGGVRKDR 266
>gi|514964|gb|AAA74939.1| Rev-erbA-alpha protein [Rattus norvegicus]
Length = 508
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 26 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 85
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 86 KCLSVGMSRDAVRFGR 101
>gi|150421550|sp|Q9PVZ9.2|ESR1_SPAAU RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha;
AltName: Full=Estradiol receptor; AltName: Full=Nuclear
receptor subfamily 3 group A member 1
gi|115313958|gb|AAD31032.2|AF136979_1 estrogen receptor type alpha [Sparus aurata]
Length = 581
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I++ R SC++CRLR
Sbjct: 145 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDRNRRKSCQACRLR 203
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 204 KCYEVGMMKGGVRKDR 219
>gi|432945337|ref|XP_004083548.1| PREDICTED: estrogen receptor-like [Oryzias latipes]
Length = 620
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I++ R SC++CRLR
Sbjct: 186 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDRNRRKSCQACRLR 244
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 245 KCYEVGMMKGGVRKDR 260
>gi|74006096|ref|XP_536146.2| PREDICTED: retinoic acid receptor RXR-gamma isoform 1 [Canis lupus
familiaris]
Length = 463
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ + C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLMYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + + GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEADCANSGHEDM 234
>gi|387539836|gb|AFJ70545.1| nuclear receptor subfamily 1 group D member 1 [Macaca mulatta]
Length = 613
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 131 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 190
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 191 KCLSVGMSRDAVRFGR 206
>gi|344256924|gb|EGW13028.1| Nuclear receptor subfamily 1 group D member 1 [Cricetulus griseus]
Length = 508
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 26 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 85
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 86 KCLSVGMSRDAVRFGR 101
>gi|297655319|gb|ADI49403.1| estrogen receptor beta 2 [Gobiocypris rarus]
Length = 554
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/103 (41%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 160 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 218
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKL 107
KC VGM K G R R S QQ+ QQ +L
Sbjct: 219 KCYEVGMMKCGLRRDRGS-----------YQQRGAQQKRLARL 250
>gi|397523279|ref|XP_003831664.1| PREDICTED: estrogen receptor beta [Pan paniscus]
Length = 530
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 208 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHC 241
>gi|195017101|ref|XP_001984538.1| GH14972 [Drosophila grimshawi]
gi|193898020|gb|EDV96886.1| GH14972 [Drosophila grimshawi]
Length = 904
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+G+H+G +CEGCK FF RS C + +C++ + NR C+ CR +
Sbjct: 400 CKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEY-RCLRDGKCLVIRLNRNRCQYCRFK 458
Query: 65 KCLMVGMSKSGSRYGR 80
KCL GMS+ RYGR
Sbjct: 459 KCLSAGMSRDSVRYGR 474
>gi|3122078|sp|O42132.1|ESR1_PAGMA RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha;
AltName: Full=Estradiol receptor; AltName: Full=Nuclear
receptor subfamily 3 group A member 1
gi|2447038|dbj|BAA22517.1| estrogen receptor [Pagrus major]
Length = 581
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I++ R SC++CRLR
Sbjct: 145 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDRNRRKSCQACRLR 203
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 204 KCYEVGMMKGGMRKDR 219
>gi|395753556|ref|XP_003779623.1| PREDICTED: LOW QUALITY PROTEIN: peroxisome proliferator-activated
receptor alpha [Pongo abelii]
Length = 476
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C++CG+ A+G+H+G CEGCK FF R+ +C + C I KKNR C+
Sbjct: 98 LNIECRICGDKASGYHYGVHACEGCKGFFRRTIRLKLVYDKC--DRSCKIQKKNRNKCQY 155
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR KCL VGMS + R+GR
Sbjct: 156 CRFHKCLSVGMSHNAIRFGR 175
>gi|54026|emb|CAA46964.1| retinoid X receptor-gamma [Mus musculus]
Length = 463
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E H D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECASSSHEDM 234
>gi|13872679|emb|CAC37560.1| estrogen receptor alpha [Clarias gariepinus]
Length = 620
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I++ R SC++CRLR
Sbjct: 192 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYV-CPATNQCTIDRNRRKSCQACRLR 250
Query: 65 KCLMVGMSKSG---SRYGRRSNWFKIHCLLQEQQQ 96
KC VGM K G R GR + H L+E+++
Sbjct: 251 KCYEVGMMKGGYRKERGGRAMKHSRRHGGLKERER 285
>gi|332322868|dbj|BAK20459.1| peroxisome proliferator-activated receptor gamma [Thunnus
orientalis]
Length = 534
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VCG+ A+GFH+G CEGCK FF R+ C + C I+KK+R C+
Sbjct: 129 LNIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLVYDHC--DLHCRIHKKSRNKCQY 186
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 187 CRFQKCLNVGMSHNAIRFGR 206
>gi|164633028|gb|ABY64727.1| estrogen receptor beta [Pan paniscus]
Length = 530
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K GSR R
Sbjct: 208 KCYEVGMVKCGSRRER 223
>gi|58430766|dbj|BAD89180.1| knirps [Sarcophaga similis]
Length = 49
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 44/49 (89%)
Query: 28 FFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGS 76
FFGRSYNNL SISECKNN +C+I+KKNRT+CK+CRLRKC VGMSK GS
Sbjct: 1 FFGRSYNNLSSISECKNNGKCVIDKKNRTTCKACRLRKCYTVGMSKGGS 49
>gi|426339581|ref|XP_004033724.1| PREDICTED: nuclear receptor subfamily 2 group C member 2, partial
[Gorilla gorilla gorilla]
Length = 616
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/93 (43%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 200 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 258
Query: 63 LRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
L+KCL +GM R S C+ + Q
Sbjct: 259 LKKCLEMGMKMECDRKMELSRARHATCMAETSQ 291
>gi|397522886|ref|XP_003831479.1| PREDICTED: nuclear receptor subfamily 1 group D member 1 [Pan
paniscus]
Length = 614
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 132 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 191
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 192 KCLSVGMSRDAVRFGR 207
>gi|85376346|gb|ABC70398.1| peroxisome proliferator-activated receptor gamma [Lateolabrax
japonicus]
Length = 522
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VCG+ A+GFH+G CEGCK FF R+ C + +C I+KK+R C+
Sbjct: 128 LNIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLVYDHC--DLQCRIHKKSRNKCQY 185
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 186 CRFQKCLSVGMSHNAIRFGR 205
>gi|3915675|sp|P50241.2|ESR1_ORYLA RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha;
AltName: Full=Estradiol receptor; AltName: Full=Nuclear
receptor subfamily 3 group A member 1
gi|3097501|dbj|BAA25900.1| estrogen receptor [Oryzias sp.]
gi|6451940|dbj|BAA86925.1| estrogen receptor [Oryzias latipes]
Length = 620
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I++ R SC++CRLR
Sbjct: 186 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDRNRRKSCQACRLR 244
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 245 KCYEVGMMKGGVRKDR 260
>gi|5596999|emb|CAB51479.1| estrogen receptor [Sparus aurata]
Length = 579
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I++ R SC++CRLR
Sbjct: 143 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDRNRRKSCQACRLR 201
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 202 KCYEVGMMKGGVRKDR 217
>gi|345786121|ref|XP_541755.3| PREDICTED: nuclear receptor subfamily 2 group C member 2 [Canis
lupus familiaris]
Length = 596
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 115 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 173
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 174 LKKCLEMGMKMESVQSERK 192
>gi|311976570|gb|ADQ20112.1| peroxisome proliferative activated receptor gamma [Bubalus bubalis]
Length = 505
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G CEGCK FF R+ C +N C I+KK+R C+ CR +
Sbjct: 139 CRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDHN--CRIHKKSRNKCQYCRFQ 196
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS + +R+ R
Sbjct: 197 KCLAVGMSHNANRFRR 212
>gi|291405975|ref|XP_002719395.1| PREDICTED: nuclear receptor subfamily 1, group D, member 1
[Oryctolagus cuniculus]
Length = 616
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 133 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 192
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 193 KCLSVGMSRDAVRFGR 208
>gi|291393486|ref|XP_002713082.1| PREDICTED: nuclear receptor subfamily 2, group C, member 2
[Oryctolagus cuniculus]
Length = 596
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 115 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 173
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 174 LKKCLEMGMKMESVQSERK 192
>gi|224066723|ref|XP_002189996.1| PREDICTED: nuclear receptor subfamily 2 group C member 2
[Taeniopygia guttata]
Length = 629
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 148 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 206
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 207 LKKCLEMGMKMESVQSERK 225
>gi|13430848|ref|NP_068370.1| nuclear receptor subfamily 1 group D member 1 [Homo sapiens]
gi|114667603|ref|XP_511468.2| PREDICTED: nuclear receptor subfamily 1 group D member 1 [Pan
troglodytes]
gi|119100|sp|P20393.1|NR1D1_HUMAN RecName: Full=Nuclear receptor subfamily 1 group D member 1;
AltName: Full=Rev-erbA-alpha; AltName:
Full=V-erbA-related protein 1; Short=EAR-1
gi|537520|gb|AAA52335.1| triiodothyronine receptor [Homo sapiens]
gi|33525229|gb|AAH56148.1| Nuclear receptor subfamily 1, group D, member 1 [Homo sapiens]
gi|60820040|gb|AAX36521.1| nuclear receptor subfamily 1 group D member 1 [synthetic construct]
gi|61363220|gb|AAX42355.1| nuclear receptor subfamily 1 group D member 1 [synthetic construct]
gi|112180498|gb|AAH47875.1| Nuclear receptor subfamily 1, group D, member 1 [Homo sapiens]
gi|119581040|gb|EAW60636.1| nuclear receptor subfamily 1, group D, member 1 [Homo sapiens]
gi|208966878|dbj|BAG73453.1| nuclear receptor subfamily 1, group D, member 1 [synthetic
construct]
gi|325495533|gb|ADZ17372.1| nuclear receptor Rev-ErbA-alpha [Homo sapiens]
gi|410215240|gb|JAA04839.1| nuclear receptor subfamily 1, group D, member 1 [Pan troglodytes]
gi|410262434|gb|JAA19183.1| nuclear receptor subfamily 1, group D, member 1 [Pan troglodytes]
gi|410262436|gb|JAA19184.1| nuclear receptor subfamily 1, group D, member 1 [Pan troglodytes]
gi|410306374|gb|JAA31787.1| nuclear receptor subfamily 1, group D, member 1 [Pan troglodytes]
gi|410353607|gb|JAA43407.1| nuclear receptor subfamily 1, group D, member 1 [Pan troglodytes]
gi|410353609|gb|JAA43408.1| nuclear receptor subfamily 1, group D, member 1 [Pan troglodytes]
Length = 614
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 132 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 191
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 192 KCLSVGMSRDAVRFGR 207
>gi|195495655|ref|XP_002095359.1| GE19737 [Drosophila yakuba]
gi|194181460|gb|EDW95071.1| GE19737 [Drosophila yakuba]
Length = 876
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+G+H+G +CEGCK FF RS C + +C++ + NR C+ CR +
Sbjct: 378 CKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEY-RCLRDGKCLVIRLNRNRCQYCRFK 436
Query: 65 KCLMVGMSKSGSRYGR 80
KCL GMS+ RYGR
Sbjct: 437 KCLSAGMSRDSVRYGR 452
>gi|355707885|gb|AES03095.1| nuclear receptor subfamily 2, group C, member 2 [Mustela putorius
furo]
Length = 609
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 128 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 186
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 187 LKKCLEMGMKMESVQSERK 205
>gi|334326740|ref|XP_001371708.2| PREDICTED: nuclear receptor ROR-beta-like [Monodelphis domestica]
Length = 663
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C I++ +R C+ CRL+
Sbjct: 153 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CSRQRNCPIDRTSRNRCQHCRLQ 211
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQT 102
KCL +GMS+ ++GR S + + Q+ Q Q+
Sbjct: 212 KCLALGMSRDAVKFGRMSKKQRDSLYAEVQRHQQNQEA 249
>gi|194749053|ref|XP_001956954.1| GF24303 [Drosophila ananassae]
gi|190624236|gb|EDV39760.1| GF24303 [Drosophila ananassae]
Length = 892
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+G+H+G +CEGCK FF RS C + +C++ + NR C+ CR +
Sbjct: 406 CKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEY-RCLRDGKCLVIRLNRNRCQYCRFK 464
Query: 65 KCLMVGMSKSGSRYGR 80
KCL GMS+ RYGR
Sbjct: 465 KCLSAGMSRDSVRYGR 480
>gi|426348347|ref|XP_004041798.1| PREDICTED: nuclear receptor subfamily 1 group D member 1 [Gorilla
gorilla gorilla]
Length = 614
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 132 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 191
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 192 KCLSVGMSRDAVRFGR 207
>gi|344246707|gb|EGW02811.1| Steroid hormone receptor ERR2 [Cricetulus griseus]
Length = 475
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C NEC I K+ R SC++CR
Sbjct: 101 CLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYS-CPATNECEITKRRRKSCQACRFM 159
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 160 KCLKVGMLKEGVRLDR 175
>gi|441616023|ref|XP_004088336.1| PREDICTED: nuclear receptor ROR-alpha [Nomascus leucogenys]
Length = 493
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 43 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 101
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 102 KCLAVGMSRDAVKFGRMS 119
>gi|60654203|gb|AAX29794.1| nuclear receptor subfamily 1 group D member 1 [synthetic construct]
Length = 615
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 132 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 191
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 192 KCLSVGMSRDAVRFGR 207
>gi|410049253|ref|XP_003952715.1| PREDICTED: nuclear receptor ROR-alpha [Pan troglodytes]
Length = 493
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 43 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 101
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 102 KCLAVGMSRDAVKFGRMS 119
>gi|28192419|gb|AAL82743.1| estrogen receptor alpha [Acanthopagrus schlegelii]
Length = 583
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I++ R SC++CRLR
Sbjct: 145 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDRNRRKSCQACRLR 203
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 204 KCYEVGMMKGGVRKDR 219
>gi|397515464|ref|XP_003827971.1| PREDICTED: nuclear receptor ROR-alpha isoform 3 [Pan paniscus]
gi|426379297|ref|XP_004056337.1| PREDICTED: nuclear receptor ROR-alpha isoform 1 [Gorilla gorilla
gorilla]
Length = 493
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 43 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 101
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 102 KCLAVGMSRDAVKFGRMS 119
>gi|395746806|ref|XP_003778513.1| PREDICTED: nuclear receptor ROR-alpha isoform 3 [Pongo abelii]
Length = 493
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 43 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 101
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 102 KCLAVGMSRDAVKFGRMS 119
>gi|348534190|ref|XP_003454586.1| PREDICTED: peroxisome proliferator-activated receptor gamma-like
isoform 3 [Oreochromis niloticus]
Length = 531
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VCG+ A+GFH+G CEGCK FF R+ C + C I+KK+R C+
Sbjct: 128 LNIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLVYDHC--DLHCRIHKKSRNKCQY 185
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 186 CRFQKCLNVGMSHNAIRFGR 205
>gi|449266326|gb|EMC77390.1| Peroxisome proliferator-activated receptor gamma [Columba livia]
Length = 475
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|444724465|gb|ELW65068.1| Integral membrane protein GPR137 [Tupaia chinensis]
Length = 1322
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 1016 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 1074
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 1075 KCLRVGMLKEGVRLDR 1090
>gi|441605781|ref|XP_003274206.2| PREDICTED: steroid hormone receptor ERR1 [Nomascus leucogenys]
Length = 422
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 79 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 137
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 138 KCLRVGMLKEGVRLDR 153
>gi|440907430|gb|ELR57584.1| Steroid hormone receptor ERR1, partial [Bos grunniens mutus]
Length = 428
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 85 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 143
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 144 KCLRVGMLKEGVRLDR 159
>gi|431910318|gb|ELK13391.1| Steroid hormone receptor ERR1 [Pteropus alecto]
Length = 504
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 163 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 221
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 222 KCLRVGMLKEGVRLDR 237
>gi|426369018|ref|XP_004051495.1| PREDICTED: steroid hormone receptor ERR1 [Gorilla gorilla gorilla]
Length = 422
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 79 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 137
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 138 KCLRVGMLKEGVRLDR 153
>gi|300798453|ref|NP_001178302.1| steroid hormone receptor ERR1 [Bos taurus]
gi|296471498|tpg|DAA13613.1| TPA: estrogen-related receptor alpha-like [Bos taurus]
Length = 422
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 79 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 137
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 138 KCLRVGMLKEGVRLDR 153
>gi|1916861|gb|AAB51250.1| estrogen related receptor alpha [Mus musculus]
Length = 420
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 79 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 137
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 138 KCLRVGMLKEGVRLDR 153
>gi|1239957|gb|AAB17015.1| estrogen receptor-related protein, partial [Homo sapiens]
Length = 481
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 138 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 196
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 197 KCLRVGMLKEGVRLDR 212
>gi|75775177|gb|AAI04702.1| Esrra protein, partial [Rattus norvegicus]
Length = 461
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 118 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 176
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 177 KCLRVGMLKEGVRLDR 192
>gi|18860920|ref|NP_004442.3| steroid hormone receptor ERR1 [Homo sapiens]
gi|215274146|sp|P11474.3|ERR1_HUMAN RecName: Full=Steroid hormone receptor ERR1; AltName: Full=Estrogen
receptor-like 1; AltName: Full=Estrogen-related receptor
alpha; Short=ERR-alpha; AltName: Full=Nuclear receptor
subfamily 3 group B member 1
gi|62205021|gb|AAH92470.1| ESRRA protein [Homo sapiens]
gi|62739721|gb|AAH93722.1| Estrogen-related receptor alpha [Homo sapiens]
gi|62739939|gb|AAH93720.1| Estrogen-related receptor alpha [Homo sapiens]
gi|94717606|gb|ABF47104.1| estrogen-related receptor alpha [Homo sapiens]
gi|119594652|gb|EAW74246.1| hCG2016877, isoform CRA_b [Homo sapiens]
gi|119594656|gb|EAW74250.1| hCG2016877, isoform CRA_b [Homo sapiens]
gi|127798260|gb|AAH63795.2| Estrogen-related receptor alpha [Homo sapiens]
gi|167773131|gb|ABZ92000.1| estrogen-related receptor alpha [synthetic construct]
gi|208966220|dbj|BAG73124.1| estrogen-related receptor alpha [synthetic construct]
gi|325495545|gb|ADZ17378.1| estrogen-related nuclear receptor alpha [Homo sapiens]
Length = 423
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 79 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 137
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 138 KCLRVGMLKEGVRLDR 153
>gi|36609|emb|CAA35778.1| unnamed protein product [Homo sapiens]
gi|225889|prf||1402310A cryptic steroid hormone receptor 1
Length = 521
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 176 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 234
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 235 KCLRVGMLKEGVRLDR 250
>gi|417410872|gb|JAA51901.1| Putative steroid hormone receptor err1, partial [Desmodus rotundus]
Length = 458
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 115 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 173
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 174 KCLRVGMLKEGVRLDR 189
>gi|410974352|ref|XP_003993611.1| PREDICTED: steroid hormone receptor ERR1 isoform 1 [Felis catus]
Length = 422
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 79 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 137
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 138 KCLRVGMLKEGVRLDR 153
>gi|403293398|ref|XP_003937704.1| PREDICTED: steroid hormone receptor ERR1 [Saimiri boliviensis
boliviensis]
Length = 422
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 79 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 137
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 138 KCLRVGMLKEGVRLDR 153
>gi|402892974|ref|XP_003909681.1| PREDICTED: steroid hormone receptor ERR1 [Papio anubis]
Length = 506
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 163 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 221
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 222 KCLRVGMLKEGVRLDR 237
>gi|397517262|ref|XP_003828835.1| PREDICTED: steroid hormone receptor ERR1 [Pan paniscus]
Length = 506
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 163 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 221
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 222 KCLRVGMLKEGVRLDR 237
>gi|395852578|ref|XP_003798814.1| PREDICTED: steroid hormone receptor ERR1 [Otolemur garnettii]
Length = 506
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 163 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 221
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 222 KCLRVGMLKEGVRLDR 237
>gi|395742567|ref|XP_002821614.2| PREDICTED: steroid hormone receptor ERR1 isoform 1 [Pongo abelii]
Length = 506
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 163 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 221
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 222 KCLRVGMLKEGVRLDR 237
>gi|390470743|ref|XP_002755520.2| PREDICTED: steroid hormone receptor ERR1-like [Callithrix jacchus]
Length = 506
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 163 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 221
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 222 KCLRVGMLKEGVRLDR 237
>gi|380810478|gb|AFE77114.1| steroid hormone receptor ERR1 [Macaca mulatta]
gi|383416493|gb|AFH31460.1| steroid hormone receptor ERR1 [Macaca mulatta]
Length = 422
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 79 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 137
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 138 KCLRVGMLKEGVRLDR 153
>gi|354498458|ref|XP_003511332.1| PREDICTED: steroid hormone receptor ERR1-like [Cricetulus griseus]
Length = 495
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 152 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 210
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 211 KCLRVGMLKEGVRLDR 226
>gi|351702007|gb|EHB04926.1| Steroid hormone receptor ERR1 [Heterocephalus glaber]
Length = 428
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 79 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 137
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 138 KCLRVGMLKEGVRLDR 153
>gi|348565344|ref|XP_003468463.1| PREDICTED: steroid hormone receptor ERR1-like [Cavia porcellus]
Length = 507
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 164 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 222
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 223 KCLRVGMLKEGVRLDR 238
>gi|344293479|ref|XP_003418450.1| PREDICTED: nuclear receptor ROR-alpha-like [Loxodonta africana]
Length = 496
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 46 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 104
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 105 KCLAVGMSRDAVKFGRMS 122
>gi|344246751|gb|EGW02855.1| Steroid hormone receptor ERR1 [Cricetulus griseus]
Length = 548
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C +NEC I K+ R +C++CR
Sbjct: 205 CLVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYS-CPASNECEITKRRRKACQACRFT 263
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 264 KCLRVGMLKEGVRLDR 279
>gi|112982637|dbj|BAF03497.1| estrogen receptor beta [Kryptolebias marmoratus]
Length = 550
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 157 CAVCHDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 215
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM+K G R R
Sbjct: 216 KCYEVGMTKCGIRKER 231
>gi|348534188|ref|XP_003454585.1| PREDICTED: peroxisome proliferator-activated receptor gamma-like
isoform 2 [Oreochromis niloticus]
Length = 524
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VCG+ A+GFH+G CEGCK FF R+ C + C I+KK+R C+
Sbjct: 128 LNIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLVYDHC--DLHCRIHKKSRNKCQY 185
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 186 CRFQKCLNVGMSHNAIRFGR 205
>gi|348511147|ref|XP_003443106.1| PREDICTED: nuclear receptor subfamily 1 group D member 2-like
[Oreochromis niloticus]
Length = 599
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 50/88 (56%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C C I + NR C+ CR +
Sbjct: 98 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKMENCTIMRINRNRCQQCRFK 157
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQ 92
KCL VGMS+ R+GR K LL+
Sbjct: 158 KCLAVGMSRDAVRFGRIPKREKQRMLLE 185
>gi|343960182|dbj|BAK63945.1| nuclear receptor ROR-alpha [Pan troglodytes]
Length = 493
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 43 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 101
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 102 KCLAVGMSRDAVKFGRMS 119
>gi|114653482|ref|XP_001170310.1| PREDICTED: estrogen receptor beta isoform 8 [Pan troglodytes]
Length = 530
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 208 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHC 241
>gi|1869971|emb|CAB05396.1| nuclear orphan receptor/transcription factor [Mus musculus]
gi|74143434|dbj|BAE28797.1| unnamed protein product [Mus musculus]
gi|74214884|dbj|BAE33451.1| unnamed protein product [Mus musculus]
Length = 467
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 17 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 75
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 76 KCLAVGMSRDAVKFGRMS 93
>gi|348241|gb|AAA02963.1| transcription factor [Homo sapiens]
Length = 468
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 18 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 76
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 77 KCLAVGMSRDAVKFGRMS 94
>gi|405954484|gb|EKC21910.1| Ecdysone-induced protein 75B, isoforms C/D [Crassostrea gigas]
Length = 695
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 4 TCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRL 63
TCKVCG+ ++GFH+G +CEGCK FF R +C N +C I R SC+ CRL
Sbjct: 102 TCKVCGDESSGFHYGVDSCEGCKGFFRRCITQ-GMTHKCSNEEKCEITPFTRNSCQYCRL 160
Query: 64 RKCLMVGMSKSGSRYGRRSNWFK 86
+KC VGMS+ SR GRR K
Sbjct: 161 KKCFAVGMSREASRLGRRPKRLK 183
>gi|50978780|ref|NP_001003093.1| peroxisome proliferator-activated receptor alpha [Canis lupus
familiaris]
gi|24418624|sp|Q95N78.1|PPARA_CANFA RecName: Full=Peroxisome proliferator-activated receptor alpha;
Short=PPAR-alpha; AltName: Full=Nuclear receptor
subfamily 1 group C member 1
gi|13752442|gb|AAK38655.1|AF350327_1 peroxisome proliferator activated receptor alpha [Canis lupus
familiaris]
Length = 468
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/101 (40%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C++CG+ A+G+H+G CEGCK FF R+ + +C + C I KKNR C+
Sbjct: 98 LNIECRICGDRASGYHYGVHACEGCKGFFRRTIRLKLAYDKC--DRSCKIQKKNRNKCQY 155
Query: 61 CRLRKCLMVGMSKSGSRYGR--RSNWFKIHCLLQEQQQQAE 99
CR KCL VGMS + R+GR RS K+ + +Q E
Sbjct: 156 CRFHKCLSVGMSHNAIRFGRMPRSEKAKLKAEILTCEQDPE 196
>gi|295414060|gb|ADG08189.1| nuclear receptor subfamily 1 group D member 1 [Potorous
tridactylus]
Length = 621
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 47/76 (61%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 138 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNESCSIIRINRNRCQQCRFK 197
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 198 KCLSVGMSRDAVRFGR 213
>gi|157060005|dbj|BAF79869.1| peroxisome proliferator-activated receptor gamma [Eublepharis
macularius]
gi|157060007|dbj|BAF79870.1| peroxisome proliferator-activated receptor gamma [Eublepharis
macularius]
Length = 476
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C+ N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCELN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|118151272|ref|NP_001071568.1| nuclear receptor subfamily 1 group D member 1 [Bos taurus]
gi|122132423|sp|Q08E02.1|NR1D1_BOVIN RecName: Full=Nuclear receptor subfamily 1 group D member 1;
AltName: Full=Rev-erbA-alpha; AltName:
Full=V-erbA-related protein 1; Short=EAR-1
gi|115305248|gb|AAI23489.1| Nuclear receptor subfamily 1, group D, member 1 [Bos taurus]
gi|296476380|tpg|DAA18495.1| TPA: nuclear receptor subfamily 1 group D member 1 [Bos taurus]
Length = 613
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 133 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 192
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 193 KCLSVGMSRDAVRFGR 208
>gi|449266386|gb|EMC77439.1| Nuclear receptor ROR-alpha, partial [Columba livia]
Length = 468
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 18 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 76
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 77 KCLAVGMSRDAVKFGRMS 94
>gi|441665232|ref|XP_003265071.2| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor subfamily 2 group
C member 2 [Nomascus leucogenys]
Length = 648
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 167 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 225
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 226 LKKCLEMGMKMESVQSERK 244
>gi|426377137|ref|XP_004055331.1| PREDICTED: estrogen receptor beta isoform 1 [Gorilla gorilla
gorilla]
Length = 530
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 208 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHC 241
>gi|164633030|gb|ABY64728.1| estrogen receptor beta [Gorilla gorilla]
Length = 530
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 208 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHC 241
>gi|119597999|gb|EAW77593.1| RAR-related orphan receptor A, isoform CRA_a [Homo sapiens]
Length = 467
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 17 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 75
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 76 KCLAVGMSRDAVKFGRMS 93
>gi|87251942|dbj|BAE79509.1| estrogen receptor beta [Eublepharis macularius]
Length = 501
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 127 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCAIDKNRRKSCQACRLR 185
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K GSR R
Sbjct: 186 KCYEVGMMKCGSRRER 201
>gi|47224612|emb|CAG03596.1| unnamed protein product [Tetraodon nigroviridis]
Length = 977
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I++ R SC++CRLR
Sbjct: 606 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDRNRRKSCQACRLR 664
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 665 KCYEVGMMKGGIRKDR 680
>gi|417411925|gb|JAA52381.1| Putative nuclear receptor subfamily protein 2 group c member 2,
partial [Desmodus rotundus]
Length = 610
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 129 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 187
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 188 LKKCLEMGMKMESVQSERK 206
>gi|395847192|ref|XP_003796267.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 1
[Otolemur garnettii]
gi|395847194|ref|XP_003796268.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 2
[Otolemur garnettii]
Length = 596
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 115 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 173
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 174 LKKCLEMGMKMESVQSERK 192
>gi|344275981|ref|XP_003409789.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 [Loxodonta
africana]
Length = 616
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 135 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 193
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 194 LKKCLEMGMKMESVQSERK 212
>gi|297296572|ref|XP_001100971.2| PREDICTED: nuclear receptor ROR-alpha-like isoform 2 [Macaca
mulatta]
Length = 468
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 18 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 76
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 77 KCLAVGMSRDAVKFGRMS 94
>gi|296213374|ref|XP_002753242.1| PREDICTED: nuclear receptor ROR-alpha [Callithrix jacchus]
Length = 468
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 18 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 76
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 77 KCLAVGMSRDAVKFGRMS 94
>gi|296202764|ref|XP_002806908.1| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor subfamily 1 group
D member 1 [Callithrix jacchus]
Length = 612
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 132 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 191
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 192 KCLSVGMSRDAVRFGR 207
>gi|281347589|gb|EFB23173.1| hypothetical protein PANDA_010183 [Ailuropoda melanoleuca]
Length = 572
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 91 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 149
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 150 LKKCLEMGMKMESVQSERK 168
>gi|216409724|dbj|BAH02299.1| nuclear receptor subfamily 2, group C, member 2 [Homo sapiens]
Length = 596
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 115 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 173
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 174 LKKCLEMGMKMESVQSERK 192
>gi|149728243|ref|XP_001491080.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 1
[Equus caballus]
Length = 596
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 115 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 173
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 174 LKKCLEMGMKMESVQSERK 192
>gi|363738759|ref|XP_414462.3| PREDICTED: nuclear receptor subfamily 2 group C member 2 [Gallus
gallus]
Length = 629
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 148 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 206
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 207 LKKCLEMGMKMESVQSERK 225
>gi|326928210|ref|XP_003210274.1| PREDICTED: nuclear receptor subfamily 2 group C member 2-like
[Meleagris gallopavo]
Length = 592
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 111 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 169
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 170 LKKCLEMGMKMESVQSERK 188
>gi|297695293|ref|XP_002824882.1| PREDICTED: estrogen receptor beta [Pongo abelii]
Length = 531
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 150 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 208
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 209 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHC 242
>gi|149728246|ref|XP_001491100.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 2
[Equus caballus]
Length = 611
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 130 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 188
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 189 LKKCLEMGMKMESVQSERK 207
>gi|14488120|emb|CAC42096.1| ERalpha protein [Canis lupus familiaris]
Length = 249
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 18/144 (12%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 86 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 141
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE-------RTKLGHPD-LL 113
RLRKC VGM K G R RR H + Q+ E + E RT P LL
Sbjct: 142 RLRKCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRNEVGSSGDVRTSSLWPSPLL 198
Query: 114 LKLDKFTNNNTIVTNNNLILQLLQ 137
+K K + +T + ++ LL+
Sbjct: 199 IKHTKKNSPALSLTADQMVSALLE 222
>gi|440899103|gb|ELR50468.1| Nuclear receptor ROR-alpha, partial [Bos grunniens mutus]
Length = 468
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 18 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 76
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 77 KCLAVGMSRDAVKFGRMS 94
>gi|432110921|gb|ELK34395.1| Nuclear receptor subfamily 2 group C member 2 [Myotis davidii]
Length = 596
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 115 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 173
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 174 LKKCLEMGMKMESVQSERK 192
>gi|332843955|ref|XP_001173382.2| PREDICTED: nuclear receptor ROR-alpha isoform 2 [Pan troglodytes]
Length = 460
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 69 KCLAVGMSRDAVKFGRMS 86
>gi|19743905|ref|NP_599024.1| nuclear receptor ROR-alpha isoform d [Homo sapiens]
gi|335279592|ref|XP_001928189.3| PREDICTED: nuclear receptor ROR-alpha [Sus scrofa]
gi|71680298|gb|AAI00990.1| RAR-related orphan receptor A [Homo sapiens]
gi|71681741|gb|AAI00989.1| RAR-related orphan receptor A [Homo sapiens]
gi|72533311|gb|AAI00988.1| RAR-related orphan receptor A [Homo sapiens]
gi|72533486|gb|AAI00991.1| RAR-related orphan receptor A [Homo sapiens]
gi|119598000|gb|EAW77594.1| RAR-related orphan receptor A, isoform CRA_b [Homo sapiens]
gi|325495447|gb|ADZ17329.1| thyroid hormone nuclear receptor alpha variant 4 [Homo sapiens]
gi|410218696|gb|JAA06567.1| RAR-related orphan receptor A [Pan troglodytes]
gi|410255712|gb|JAA15823.1| RAR-related orphan receptor A [Pan troglodytes]
gi|410306084|gb|JAA31642.1| RAR-related orphan receptor A [Pan troglodytes]
gi|410352249|gb|JAA42728.1| RAR-related orphan receptor A [Pan troglodytes]
Length = 468
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 18 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 76
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 77 KCLAVGMSRDAVKFGRMS 94
>gi|51100569|emb|CAD43599.1| oestrogen receptor alpha [Dicentrarchus labrax]
Length = 639
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I++ R SC++CRLR
Sbjct: 193 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDRNRRKSCQACRLR 251
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 252 KCYEVGMMKGGVRKDR 267
>gi|355568630|gb|EHH24911.1| V-erbA-related protein 1 [Macaca mulatta]
Length = 668
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 154 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 213
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 214 KCLSVGMSRDAVRFGR 229
>gi|395826494|ref|XP_003786453.1| PREDICTED: nuclear receptor subfamily 1 group D member 1 [Otolemur
garnettii]
Length = 613
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 131 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 190
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 191 KCLSVGMSRDAVRFGR 206
>gi|348555499|ref|XP_003463561.1| PREDICTED: nuclear receptor ROR-alpha [Cavia porcellus]
Length = 478
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 28 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 86
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 87 KCLAVGMSRDAVKFGRMS 104
>gi|332237301|ref|XP_003267842.1| PREDICTED: estrogen receptor beta isoform 1 [Nomascus leucogenys]
Length = 530
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 208 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHC 241
>gi|301779115|ref|XP_002924974.1| PREDICTED: nuclear receptor subfamily 1 group D member 1-like
[Ailuropoda melanoleuca]
Length = 613
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 131 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 190
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 191 KCLSVGMSRDAVRFGR 206
>gi|164633032|gb|ABY64729.1| estrogen receptor beta [Pongo pygmaeus]
Length = 531
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 150 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 208
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 209 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHC 242
>gi|196259779|ref|NP_001124501.1| nuclear receptor subfamily 1 group D member 1 [Ovis aries]
gi|263504928|sp|B3SV56.1|NR1D1_SHEEP RecName: Full=Nuclear receptor subfamily 1 group D member 1;
AltName: Full=Rev-erbA-alpha; AltName:
Full=V-erbA-related protein 1; Short=EAR-1
gi|157399613|gb|ABV53446.1| rev-erb alpha [Ovis aries]
Length = 614
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 133 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 192
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 193 KCLSVGMSRDAVRFGR 208
>gi|10835013|ref|NP_001428.1| estrogen receptor beta isoform 1 [Homo sapiens]
gi|6166154|sp|Q92731.2|ESR2_HUMAN RecName: Full=Estrogen receptor beta; Short=ER-beta; AltName:
Full=Nuclear receptor subfamily 3 group A member 2
gi|11095620|gb|AAG29940.1|AF215937_1 5p152 [Homo sapiens]
gi|2911152|dbj|BAA24953.1| estrogen receptor beta [Homo sapiens]
gi|2970564|gb|AAC05985.1| estrogen receptor beta [Homo sapiens]
gi|54288833|gb|AAV31779.1| estrogen receptor 2 (ER beta) [Homo sapiens]
gi|119601251|gb|EAW80845.1| estrogen receptor 2 (ER beta), isoform CRA_a [Homo sapiens]
gi|119601252|gb|EAW80846.1| estrogen receptor 2 (ER beta), isoform CRA_a [Homo sapiens]
gi|119601253|gb|EAW80847.1| estrogen receptor 2 (ER beta), isoform CRA_a [Homo sapiens]
gi|325495451|gb|ADZ17331.1| estrogen nuclear receptor beta variant a [Homo sapiens]
Length = 530
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 208 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHC 241
>gi|114585553|ref|XP_001158452.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 3
[Pan troglodytes]
gi|296225930|ref|XP_002758705.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 1
[Callithrix jacchus]
gi|297670033|ref|XP_002813184.1| PREDICTED: uncharacterized protein LOC100448384 isoform 1 [Pongo
abelii]
gi|390475359|ref|XP_003734943.1| PREDICTED: nuclear receptor subfamily 2 group C member 2
[Callithrix jacchus]
gi|397511831|ref|XP_003826268.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 2
[Pan paniscus]
gi|402887045|ref|XP_003906916.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 2
[Papio anubis]
gi|403268295|ref|XP_003926213.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 1
[Saimiri boliviensis boliviensis]
gi|410036591|ref|XP_003950084.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 [Pan
troglodytes]
gi|1351190|sp|P49116.1|NR2C2_HUMAN RecName: Full=Nuclear receptor subfamily 2 group C member 2;
AltName: Full=Orphan nuclear receptor TAK1; AltName:
Full=Orphan nuclear receptor TR4; AltName:
Full=Testicular receptor 4
gi|758382|gb|AAC50118.1| hTAK1 [Homo sapiens]
gi|119584619|gb|EAW64215.1| nuclear receptor subfamily 2, group C, member 2, isoform CRA_b
[Homo sapiens]
gi|158254612|dbj|BAF83279.1| unnamed protein product [Homo sapiens]
Length = 596
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 115 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 173
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 174 LKKCLEMGMKMESVQSERK 192
>gi|354503278|ref|XP_003513708.1| PREDICTED: nuclear receptor ROR-alpha, partial [Cricetulus
griseus]
Length = 473
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 23 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 81
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 82 KCLAVGMSRDAVKFGRMS 99
>gi|164633034|gb|ABY64730.1| estrogen receptor beta [Hylobates lar]
Length = 530
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 208 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHC 241
>gi|133777005|gb|AAH03757.2| Rora protein [Mus musculus]
Length = 460
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 69 KCLAVGMSRDAVKFGRMS 86
>gi|40217924|gb|AAR82891.1| estrogen receptor alpha [Haplochromis burtoni]
Length = 582
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 139 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 197
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 198 KCYEVGMMKGGMRKDR 213
>gi|440904253|gb|ELR54792.1| Nuclear receptor subfamily 1 group D member 1 [Bos grunniens mutus]
Length = 587
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 133 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 192
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 193 KCLSVGMSRDAVRFGR 208
>gi|403304593|ref|XP_003942879.1| PREDICTED: nuclear receptor subfamily 1 group D member 1 [Saimiri
boliviensis boliviensis]
Length = 615
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 133 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 192
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 193 KCLSVGMSRDAVRFGR 208
>gi|348576346|ref|XP_003473948.1| PREDICTED: peroxisome proliferator-activated receptor delta [Cavia
porcellus]
Length = 440
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VCG+ A+GFH+G CEGCK FF R+ +C N C I KKNR C+
Sbjct: 69 LNMECRVCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCDRN--CKIQKKNRNKCQY 126
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL +GMS + R+GR
Sbjct: 127 CRFQKCLALGMSHNAIRFGR 146
>gi|431890671|gb|ELK01550.1| Nuclear receptor subfamily 1 group D member 1 [Pteropus alecto]
Length = 615
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 133 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 192
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 193 KCLSVGMSRDAVRFGR 208
>gi|402874466|ref|XP_003901058.1| PREDICTED: nuclear receptor ROR-alpha isoform 1 [Papio anubis]
Length = 468
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 18 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 76
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 77 KCLAVGMSRDAVKFGRMS 94
>gi|348562363|ref|XP_003466980.1| PREDICTED: nuclear receptor subfamily 1 group D member 1 [Cavia
porcellus]
Length = 611
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 130 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIIRINRNRCQQCRFK 189
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 190 KCLSVGMSRDAVRFGR 205
>gi|348508090|ref|XP_003441588.1| PREDICTED: vitamin D3 receptor B-like [Oreochromis niloticus]
Length = 425
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A GFHF A TCEGCK FF RS + + C N C I K NR C++CR
Sbjct: 22 RICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKATFT-CPFNGSCTITKDNRRHCQACR 80
Query: 63 LRKCLMVGMSK----SGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKL 107
L++C+ +GM K + R+ + + +E Q++AE++ R +L
Sbjct: 81 LKRCVDIGMMKEFILTDEEVQRKKDLIQRR-KDEEAQREAEKEARRPRL 128
>gi|345805420|ref|XP_003435298.1| PREDICTED: nuclear receptor subfamily 1 group D member 1 [Canis
lupus familiaris]
Length = 612
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 130 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 189
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 190 KCLSVGMSRDAVRFGR 205
>gi|281344606|gb|EFB20190.1| hypothetical protein PANDA_014399 [Ailuropoda melanoleuca]
Length = 603
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 121 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 180
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 181 KCLSVGMSRDAVRFGR 196
>gi|325495551|gb|ADZ17381.1| thyroid hormone nuclear receptor alpha [Homo sapiens]
Length = 467
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 18 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 76
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 77 KCLAVGMSRDAVKFGRMS 94
>gi|290491185|ref|NP_001166475.1| peroxisome proliferator-activated receptor alpha [Cavia porcellus]
gi|3024415|sp|O35507.1|PPARA_CAVPO RecName: Full=Peroxisome proliferator-activated receptor alpha;
Short=PPAR-alpha; AltName: Full=Nuclear receptor
subfamily 1 group C member 1
gi|2407894|emb|CAA03951.1| peroxisome proliferator-activated receptor alpha [Cavia porcellus]
Length = 467
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C++CG+ A+G+H+G CEGCK FF R+ +C + C I KKNR C+
Sbjct: 98 LNIECRICGDKASGYHYGVHACEGCKGFFRRTIRLKLVYDKC--DRSCKIQKKNRNKCQY 155
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR KCL VGMS + R+GR
Sbjct: 156 CRFHKCLSVGMSHNAIRFGR 175
>gi|74138696|dbj|BAE27164.1| unnamed protein product [Mus musculus]
Length = 615
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 133 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 192
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 193 KCLSVGMSRDAVRFGR 208
>gi|2570170|dbj|BAA22970.1| mROR4 [Mus caroli]
gi|9653297|gb|AAB46801.2| orphan nuclear receptor [Mus sp.]
Length = 466
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 17 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 75
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 76 KCLAVGMSRDAVKFGRMS 93
>gi|410980965|ref|XP_003996844.1| PREDICTED: nuclear receptor subfamily 1 group D member 1 [Felis
catus]
Length = 611
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 130 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 189
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 190 KCLSVGMSRDAVRFGR 205
>gi|354496831|ref|XP_003510528.1| PREDICTED: nuclear receptor subfamily 1 group D member 1
[Cricetulus griseus]
Length = 615
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 133 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 192
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 193 KCLSVGMSRDAVRFGR 208
>gi|36950991|ref|NP_003289.2| nuclear receptor subfamily 2 group C member 2 [Homo sapiens]
gi|296225932|ref|XP_002758706.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 2
[Callithrix jacchus]
gi|119584617|gb|EAW64213.1| nuclear receptor subfamily 2, group C, member 2, isoform CRA_a
[Homo sapiens]
gi|119584618|gb|EAW64214.1| nuclear receptor subfamily 2, group C, member 2, isoform CRA_a
[Homo sapiens]
gi|168278006|dbj|BAG10981.1| orphan nuclear receptor TR4 [synthetic construct]
gi|325588346|gb|ADZ31973.1| testicular nuclear receptor 4 [Homo sapiens]
gi|355564520|gb|EHH21020.1| hypothetical protein EGK_03993 [Macaca mulatta]
gi|380816092|gb|AFE79920.1| nuclear receptor subfamily 2 group C member 2 [Macaca mulatta]
gi|383421225|gb|AFH33826.1| nuclear receptor subfamily 2 group C member 2 [Macaca mulatta]
Length = 615
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 134 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 192
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 193 LKKCLEMGMKMESVQSERK 211
>gi|3150144|emb|CAA06917.1| peroxisome proliferator activated receptor alpha [Cavia porcellus]
Length = 467
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C++CG+ A+G+H+G CEGCK FF R+ +C + C I KKNR C+
Sbjct: 98 LNIECRICGDKASGYHYGVHACEGCKGFFRRTIRLKLVYDKC--DRSCKIQKKNRNKCQY 155
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR KCL VGMS + R+GR
Sbjct: 156 CRFHKCLSVGMSHNAIRFGR 175
>gi|114585547|ref|XP_001158643.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 6
[Pan troglodytes]
gi|410222744|gb|JAA08591.1| nuclear receptor subfamily 2, group C, member 2 [Pan troglodytes]
gi|410261218|gb|JAA18575.1| nuclear receptor subfamily 2, group C, member 2 [Pan troglodytes]
gi|410287872|gb|JAA22536.1| nuclear receptor subfamily 2, group C, member 2 [Pan troglodytes]
gi|410349801|gb|JAA41504.1| nuclear receptor subfamily 2, group C, member 2 [Pan troglodytes]
Length = 615
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 134 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 192
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 193 LKKCLEMGMKMESVQSERK 211
>gi|13124193|sp|P57781.1|ESR2_MICUN RecName: Full=Estrogen receptor beta; Short=ER-beta; AltName:
Full=Nuclear receptor subfamily 3 group A member 2
gi|10312208|gb|AAG16711.1|AF298181_1 estrogen receptor beta [Micropogonias undulatus]
Length = 673
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 182 CAVCHDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 240
Query: 65 KCLMVGMSKSGSRYGRRS 82
KC VGM K G R R S
Sbjct: 241 KCYEVGMMKCGVRRERCS 258
>gi|301774943|ref|XP_002922885.1| PREDICTED: peroxisome proliferator-activated receptor alpha-like
[Ailuropoda melanoleuca]
gi|281348935|gb|EFB24519.1| hypothetical protein PANDA_011925 [Ailuropoda melanoleuca]
Length = 468
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C++CG+ A+G+H+G CEGCK FF R+ + C + C I KKNR C+
Sbjct: 98 LNIECRICGDRASGYHYGVHACEGCKGFFRRTVRLKLAYDRC--DRHCKIQKKNRNKCQY 155
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR KCL VGMS + R+GR
Sbjct: 156 CRFHKCLSVGMSHNAIRFGR 175
>gi|37785823|gb|AAO39210.1| estrogen receptor beta [Micropterus salmoides]
Length = 670
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 181 CAVCHDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 239
Query: 65 KCLMVGMSKSGSRYGRRS 82
KC VGM K G R R S
Sbjct: 240 KCYEVGMMKCGVRRERCS 257
>gi|345795020|ref|XP_535503.3| PREDICTED: nuclear receptor ROR-alpha [Canis lupus familiaris]
Length = 523
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 73 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 131
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 132 KCLAVGMSRDAVKFGRMS 149
>gi|224062295|ref|XP_002195185.1| PREDICTED: nuclear receptor ROR-alpha [Taeniopygia guttata]
Length = 524
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 74 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 132
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 133 KCLAVGMSRDAVKFGRMS 150
>gi|405977427|gb|EKC41882.1| hypothetical protein CGI_10012788 [Crassostrea gigas]
Length = 1295
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
Q C VCG+ +G+H+G FTCE CK FF R+ N + + C N +C I++ NR C SCR
Sbjct: 907 QPCPVCGDNVSGYHYGIFTCESCKGFFKRTVQNNKTFT-CHRNGDCEISRGNRKKCPSCR 965
Query: 63 LRKCLMVGMSKSGSRYGR 80
KC+++GM R R
Sbjct: 966 FAKCVLMGMKTQAVRLDR 983
>gi|164633036|gb|ABY64731.1| estrogen receptor beta [Colobus guereza]
Length = 530
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHC 89
KC VGM K GSR R RS ++HC
Sbjct: 208 KCYEVGMVKCGSRRERCGYRLVRRQRSADEQLHC 241
>gi|86278355|gb|ABC88430.1| estrogen receptor alpha short form [Kryptolebias marmoratus]
Length = 548
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I++ R SC++CRLR
Sbjct: 185 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDRNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 244 KCYEVGMMKGGVRKDR 259
>gi|13183321|gb|AAK15151.1|AF267736_1 estrogen receptor beta [Sus scrofa]
Length = 526
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 10/100 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 146 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 204
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHCLLQEQQ 95
KC VGM K GSR R R++ +HCL + ++
Sbjct: 205 KCYEVGMVKCGSRRERCGYRIVRKQRNSEGHLHCLSRAKK 244
>gi|410951774|ref|XP_003982568.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 1
[Felis catus]
Length = 596
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 115 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 173
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 174 LKKCLEMGMKMESVQSERK 192
>gi|395822270|ref|XP_003784444.1| PREDICTED: nuclear receptor ROR-alpha [Otolemur garnettii]
Length = 523
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 73 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 131
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 132 KCLAVGMSRDAVKFGRMS 149
>gi|338719850|ref|XP_001915554.2| PREDICTED: estrogen receptor beta [Equus caballus]
Length = 530
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 60/100 (60%), Gaps = 10/100 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKHRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHCLLQEQQ 95
KC VGM K GSR R R++ ++HCL + ++
Sbjct: 208 KCHEVGMVKCGSRRERCGYRVVRRQRNSSEQLHCLSKAKK 247
>gi|297263121|ref|XP_001091445.2| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 1
[Macaca mulatta]
Length = 596
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 115 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 173
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 174 LKKCLEMGMKMESVQSERK 192
>gi|198466632|ref|XP_001354071.2| GA14768 [Drosophila pseudoobscura pseudoobscura]
gi|198150690|gb|EAL29809.2| GA14768 [Drosophila pseudoobscura pseudoobscura]
Length = 897
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+G+H+G +CEGCK FF RS C + +C++ + NR C+ CR +
Sbjct: 407 CKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEY-RCLRDGKCLVIRLNRNRCQYCRFK 465
Query: 65 KCLMVGMSKSGSRYGR 80
KCL GMS+ RYGR
Sbjct: 466 KCLSAGMSRDSVRYGR 481
>gi|164663889|ref|NP_001106893.1| nuclear receptor subfamily 1 group D member 1 isoform 1 [Rattus
norvegicus]
Length = 615
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 133 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 192
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 193 KCLSVGMSRDAVRFGR 208
>gi|149412644|ref|XP_001506287.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 1
[Ornithorhynchus anatinus]
Length = 596
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 115 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 173
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 174 LKKCLEMGMKMESVQSERK 192
>gi|149054137|gb|EDM05954.1| nuclear receptor subfamily 1, group D, member 1, isoform CRA_b
[Rattus norvegicus]
Length = 614
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 132 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 191
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 192 KCLSVGMSRDAVRFGR 207
>gi|48374061|ref|NP_001001533.1| estrogen receptor beta [Sus scrofa]
gi|20141292|sp|Q9XSW2.2|ESR2_PIG RecName: Full=Estrogen receptor beta; Short=ER-beta; AltName:
Full=Nuclear receptor subfamily 3 group A member 2
gi|14717427|gb|AAD45381.2| estrogen receptor beta [Sus scrofa]
Length = 526
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 10/100 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 146 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 204
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHCLLQEQQ 95
KC VGM K GSR R R++ +HCL + ++
Sbjct: 205 KCYEVGMVKCGSRRERCGYRIVRKQRNSEGHLHCLSRAKK 244
>gi|19743903|ref|NP_599023.1| nuclear receptor ROR-alpha isoform a [Homo sapiens]
gi|114657409|ref|XP_001173408.1| PREDICTED: nuclear receptor ROR-alpha isoform 6 [Pan troglodytes]
gi|451564|gb|AAA62658.1| RORalpha1 [Homo sapiens]
gi|14250724|gb|AAH08831.1| RAR-related orphan receptor A [Homo sapiens]
Length = 523
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 73 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 131
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 132 KCLAVGMSRDAVKFGRMS 149
>gi|157278145|ref|NP_001098172.1| estrogen receptor beta [Oryzias latipes]
gi|18143643|dbj|BAB79705.1| estrogen receptor beta [Oryzias latipes]
Length = 562
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 157 CAVCHDYASGYHYGVWSCEGCKAFFKRSIQGHTDYI-CPATNQCTIDKNRRKSCQACRLR 215
Query: 65 KCLMVGMSKSGSRYGRRS 82
KC VGM+K G R R S
Sbjct: 216 KCYEVGMTKCGVRKERSS 233
>gi|410962432|ref|XP_003987774.1| PREDICTED: estrogen receptor beta [Felis catus]
Length = 550
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 168 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 226
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K GSR R
Sbjct: 227 KCYEVGMVKCGSRRER 242
>gi|403274571|ref|XP_003929048.1| PREDICTED: nuclear receptor ROR-alpha [Saimiri boliviensis
boliviensis]
Length = 523
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 73 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 131
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 132 KCLAVGMSRDAVKFGRMS 149
>gi|145749785|gb|ABP96712.1| estrogen receptor alpha1 [Lepomis macrochirus]
Length = 582
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I++ R SC++CRLR
Sbjct: 141 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDRNRRKSCQACRLR 199
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 200 KCYEVGMMKGGVRKDR 215
>gi|112982639|dbj|BAF03498.1| estrogen receptor alpha [Kryptolebias marmoratus]
Length = 580
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I++ R SC++CRLR
Sbjct: 140 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDRNRRKSCQACRLR 198
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 199 KCYEVGMMKGGVRKDR 214
>gi|160332191|sp|Q63503.2|NR1D1_RAT RecName: Full=Nuclear receptor subfamily 1 group D member 1;
AltName: Full=Rev-erbA-alpha; AltName:
Full=V-erbA-related protein 1; Short=EAR-1
gi|38303953|gb|AAH62047.1| Nr1d1 protein [Rattus norvegicus]
Length = 615
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 133 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 192
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 193 KCLSVGMSRDAVRFGR 208
>gi|33386558|emb|CAD62448.1| peroxisome proliferator-activated receptor beta [Pleuronectes
platessa]
Length = 510
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF R+ C+ + C I KKNR C+ CR +
Sbjct: 143 CKVCGDKASGFHYGVHACEGCKGFFRRTVRMKLEYDRCERS--CKILKKNRNKCQYCRFQ 200
Query: 65 KCLMVGMSKSGSRYGR 80
KCL +GMS RYGR
Sbjct: 201 KCLSLGMSHDAIRYGR 216
>gi|400270861|gb|AFP75253.1| nuclear receptor subfamily 2 group C member 2, partial [Tupaia
belangeri]
Length = 566
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 110 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 168
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 169 LKKCLEMGMKMESVQSERK 187
>gi|431916906|gb|ELK16662.1| Nuclear receptor subfamily 2 group C member 2 [Pteropus alecto]
Length = 596
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 115 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 173
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 174 LKKCLEMGMKMESVQSERK 192
>gi|14290448|gb|AAH08989.1| Nuclear receptor subfamily 1, group D, member 1 [Mus musculus]
Length = 615
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 133 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 192
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 193 KCLSVGMSRDAVRFGR 208
>gi|31158286|dbj|BAC76957.1| estrogen receptor a [Fundulus heteroclitus]
Length = 620
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I++ R SC++CRLR
Sbjct: 192 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDRNRRKSCQACRLR 250
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 251 KCYEVGMMKGGVRKER 266
>gi|402887043|ref|XP_003906915.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 1
[Papio anubis]
gi|403268297|ref|XP_003926214.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 648
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 167 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 225
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 226 LKKCLEMGMKMESVQSERK 244
>gi|397511829|ref|XP_003826267.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 1
[Pan paniscus]
Length = 648
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 167 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 225
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 226 LKKCLEMGMKMESVQSERK 244
>gi|351698410|gb|EHB01329.1| Nuclear receptor ROR-alpha [Heterocephalus glaber]
Length = 571
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 122 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 180
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 181 KCLAVGMSRDAVKFGRMS 198
>gi|301771740|ref|XP_002921290.1| PREDICTED: nuclear receptor subfamily 2 group C member 2-like
[Ailuropoda melanoleuca]
Length = 611
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 130 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 188
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 189 LKKCLEMGMKMESVQSERK 207
>gi|68132002|gb|AAY85267.1| PPARalpha-A, partial [Danio rerio]
Length = 473
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/111 (39%), Positives = 60/111 (54%), Gaps = 12/111 (10%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VC + A+GFH+G CEGCK FF R+ +C+ N C I KKNR C+ CR
Sbjct: 102 CRVCADRASGFHYGVHACEGCKGFFRRTIRLKLEYDKCERN--CKIQKKNRNKCQYCRFP 159
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQT---ERTKLGHPDL 112
+CL VGMS + R+GR ++Q+ +AEQ E K PD+
Sbjct: 160 QCLAVGMSHNAIRFGRIPQ-------SEKQRLKAEQDVSGKEEHKCQQPDM 203
>gi|110625908|ref|NP_663409.2| nuclear receptor subfamily 1 group D member 1 [Mus musculus]
gi|123797485|sp|Q3UV55.1|NR1D1_MOUSE RecName: Full=Nuclear receptor subfamily 1 group D member 1;
AltName: Full=Rev-erbA-alpha; AltName:
Full=V-erbA-related protein 1; Short=EAR-1
gi|74191988|dbj|BAE32932.1| unnamed protein product [Mus musculus]
gi|74210239|dbj|BAE23342.1| unnamed protein product [Mus musculus]
gi|74212726|dbj|BAE33339.1| unnamed protein product [Mus musculus]
gi|74215751|dbj|BAE23418.1| unnamed protein product [Mus musculus]
gi|148684219|gb|EDL16166.1| nuclear receptor subfamily 1, group D, member 1 [Mus musculus]
Length = 615
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 133 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 192
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 193 KCLSVGMSRDAVRFGR 208
>gi|402874468|ref|XP_003901059.1| PREDICTED: nuclear receptor ROR-alpha isoform 2 [Papio anubis]
Length = 515
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 65 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 123
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 124 KCLAVGMSRDAVKFGRMS 141
>gi|37683429|gb|AAQ98788.1| reconstructed ancestral steroid receptor DBD [synthetic construct]
Length = 105
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G+H+G ++CEGCK+FF RS C NEC I+K R SC++CR
Sbjct: 5 RLCLVCGDNASGYHYGVWSCEGCKAFFKRSIQGHIDYM-CPATNECTIDKHRRKSCQACR 63
Query: 63 LRKCLMVGMSKSGSRYGRRSNW-FKIHCLLQEQQQQAEQ 100
LRKCL VGM K G R RR K + +++Q+Q ++
Sbjct: 64 LRKCLEVGMMKGGVRKDRRGGGRVKFGPMHKKRQRQLKE 102
>gi|417401468|gb|JAA47619.1| Putative peroxisome proliferator-activated receptor alpha [Desmodus
rotundus]
Length = 468
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C++CG+ A+G+H+G CEGCK FF R+ +C+ + C I KKNR C+
Sbjct: 98 LNIECRICGDKASGYHYGVHACEGCKGFFRRTIRLKLVYDKCERS--CKIQKKNRNKCQY 155
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR KCL VGMS + R+GR
Sbjct: 156 CRFHKCLSVGMSHNAIRFGR 175
>gi|397515460|ref|XP_003827969.1| PREDICTED: nuclear receptor ROR-alpha isoform 1 [Pan paniscus]
Length = 516
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 66 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 124
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 125 KCLAVGMSRDAVKFGRMS 142
>gi|378705840|gb|AFC34772.1| RORalpha2 [Ctenopharyngodon idella]
Length = 468
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 18 CKICGDESSGIHYGVITCEGCKGFFRRSQQSNAAYS-CPRQKNCLIDRTSRNRCQHCRLQ 76
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 77 KCLAVGMSRDAVKFGRMS 94
>gi|326926497|ref|XP_003209436.1| PREDICTED: nuclear receptor ROR-alpha-like [Meleagris gallopavo]
Length = 543
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 93 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 151
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 152 KCLAVGMSRDAVKFGRMS 169
>gi|295291562|gb|ADF87494.1| estrogen receptor alpha [Melanotaenia fluviatilis]
Length = 610
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I++ R SC++CRLR
Sbjct: 186 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDRNRRKSCQACRLR 244
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 245 KCYEVGMMKGGVRKDR 260
>gi|291402905|ref|XP_002718250.1| PREDICTED: RAR-related orphan receptor A [Oryctolagus cuniculus]
Length = 633
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 183 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 241
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 242 KCLAVGMSRDAVKFGRMS 259
>gi|281347428|gb|EFB23012.1| hypothetical protein PANDA_012073 [Ailuropoda melanoleuca]
Length = 546
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 96 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 154
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 155 KCLAVGMSRDAVKFGRMS 172
>gi|224065487|ref|XP_002187946.1| PREDICTED: peroxisome proliferator-activated receptor gamma
[Taeniopygia guttata]
Length = 475
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|444714014|gb|ELW54902.1| Nuclear receptor subfamily 1 group D member 1 [Tupaia chinensis]
Length = 612
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 131 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 190
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 191 KCLSVGMSRDAVRFGR 206
>gi|397515462|ref|XP_003827970.1| PREDICTED: nuclear receptor ROR-alpha isoform 2 [Pan paniscus]
Length = 524
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 74 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 132
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 133 KCLAVGMSRDAVKFGRMS 150
>gi|395746802|ref|XP_003778512.1| PREDICTED: nuclear receptor ROR-alpha isoform 2 [Pongo abelii]
Length = 516
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 66 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 124
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 125 KCLAVGMSRDAVKFGRMS 142
>gi|351710304|gb|EHB13223.1| Peroxisome proliferator-activated receptor alpha [Heterocephalus
glaber]
Length = 467
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C++CG+ A+G+H+G CEGCK FF R+ + C + C I KKNR C+
Sbjct: 98 LNIECRICGDKASGYHYGVHACEGCKGFFRRTIRLKLAYDTC--DRSCKIQKKNRNKCQY 155
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR KCL VGMS + R+GR
Sbjct: 156 CRFHKCLSVGMSHNAIRFGR 175
>gi|198466974|ref|XP_001354210.2| GA20327 [Drosophila pseudoobscura pseudoobscura]
gi|198149449|gb|EAL31262.2| GA20327 [Drosophila pseudoobscura pseudoobscura]
Length = 491
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ + C VCG+ A+GFH+G +CE CK+FF R+ + C NNEC INK+ R +C++
Sbjct: 108 LRRLCLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYT-CPANNECEINKRRRKACQA 166
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL++GM K G R R
Sbjct: 167 CRFQKCLLMGMLKEGVRLDR 186
>gi|300797466|ref|NP_001179790.1| nuclear receptor ROR-alpha [Bos taurus]
gi|296483252|tpg|DAA25367.1| TPA: RAR-related orphan receptor A [Bos taurus]
Length = 523
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 73 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 131
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 132 KCLAVGMSRDAVKFGRMS 149
>gi|195167568|ref|XP_002024605.1| GL22565 [Drosophila persimilis]
gi|194108010|gb|EDW30053.1| GL22565 [Drosophila persimilis]
Length = 490
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ + C VCG+ A+GFH+G +CE CK+FF R+ + C NNEC INK+ R +C++
Sbjct: 108 LRRLCLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYT-CPANNECEINKRRRKACQA 166
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL++GM K G R R
Sbjct: 167 CRFQKCLLMGMLKEGVRLDR 186
>gi|3077649|emb|CAA05631.1| estrogen receptor beta [Rattus norvegicus]
Length = 549
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 59/98 (60%), Gaps = 16/98 (16%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G + CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 168 CAVCSDYASGYHYGVWPCEGCKAFFKRSIQGHNDY----ICPATNQCTIDKNRRKSCQAC 223
Query: 62 RLRKCLMVGMSKSGSRYGR---------RSNWFKIHCL 90
RLRKC VGM K GSR R RS+ ++HCL
Sbjct: 224 RLRKCYEVGMVKCGSRRERCGYRIVRRQRSSSEQVHCL 261
>gi|5596832|emb|CAB51396.1| peroxisome proliferator-activated receptor gamma [Platichthys
flesus]
Length = 532
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VCG+ A+GFH+G CEGCK FF R+ C + C I+KK+R C+
Sbjct: 128 LNIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLVYDHC--DLHCRIHKKSRNKCQY 185
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 186 CRFQKCLNVGMSHNAIRFGR 205
>gi|395746804|ref|XP_002825560.2| PREDICTED: nuclear receptor ROR-alpha isoform 1 [Pongo abelii]
Length = 524
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 74 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 132
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 133 KCLAVGMSRDAVKFGRMS 150
>gi|327265851|ref|XP_003217721.1| PREDICTED: peroxisome proliferator-activated receptor gamma-like
[Anolis carolinensis]
Length = 475
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|440911071|gb|ELR60797.1| Steroid hormone receptor ERR2, partial [Bos grunniens mutus]
Length = 458
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C NEC I K+ R SC++CR
Sbjct: 118 CLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYS-CPATNECEITKRRRKSCQACRFM 176
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 177 KCLKVGMLKEGVRLDR 192
>gi|348573179|ref|XP_003472369.1| PREDICTED: steroid hormone receptor ERR2-like [Cavia porcellus]
Length = 466
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C NEC I K+ R SC++CR
Sbjct: 136 CLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYS-CPATNECEITKRRRKSCQACRFM 194
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 195 KCLKVGMLKEGVRLDR 210
>gi|395819574|ref|XP_003783157.1| PREDICTED: peroxisome proliferator-activated receptor alpha
[Otolemur garnettii]
Length = 468
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C++CG+ A+G+H+G CEGCK FF R+ +C + C I KKNR C+
Sbjct: 98 LNIECRICGDKASGYHYGVHACEGCKGFFRRTVRLKLVYDKC--DRSCKIQKKNRNKCQY 155
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR KCL VGMS + R+GR
Sbjct: 156 CRFHKCLSVGMSHNAIRFGR 175
>gi|4506577|ref|NP_002934.1| nuclear receptor ROR-alpha isoform c [Homo sapiens]
gi|451568|gb|AAA62660.1| RORalpha3 [Homo sapiens]
gi|119598001|gb|EAW77595.1| RAR-related orphan receptor A, isoform CRA_c [Homo sapiens]
Length = 548
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 98 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 156
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 157 KCLAVGMSRDAVKFGRMS 174
>gi|326924824|ref|XP_003208625.1| PREDICTED: retinoic acid receptor RXR-gamma-like [Meleagris
gallopavo]
Length = 494
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 12/108 (11%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+ CR +
Sbjct: 143 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQYCRYQ 201
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
KCL +GM + + R Q ++++E + E T G D+
Sbjct: 202 KCLAMGMKREAVQEER-----------QRSRERSENEAESTSGGSEDM 238
>gi|417402806|gb|JAA48237.1| Putative nuclear receptor [Desmodus rotundus]
Length = 565
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 131 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 190
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 191 KCLSVGMSRDAVRFGR 206
>gi|164414403|ref|NP_001103637.1| nuclear receptor ROR-alpha [Danio rerio]
gi|156720176|dbj|BAF76726.1| retinoid-related orphan receptor alpha 2 [Danio rerio]
Length = 468
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 18 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYS-CPRQKNCLIDRTSRNRCQHCRLQ 76
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 77 KCLAVGMSRDAVKFGRMS 94
>gi|410961130|ref|XP_003987138.1| PREDICTED: nuclear receptor ROR-alpha [Felis catus]
Length = 493
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 43 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 101
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 102 KCLAVGMSRDAVKFGRMS 119
>gi|216409696|dbj|BAH02285.1| retinoid-related orphan receptor alpha [Homo sapiens]
Length = 523
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 73 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 131
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 132 KCLAVGMSRDAVKFGRMS 149
>gi|195348475|ref|XP_002040774.1| GM22351 [Drosophila sechellia]
gi|194122284|gb|EDW44327.1| GM22351 [Drosophila sechellia]
Length = 986
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+G+H+G +CEGCK FF RS C + +C++ + NR C+ CR +
Sbjct: 493 CKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEY-RCLRDGKCLVIRLNRNRCQYCRFK 551
Query: 65 KCLMVGMSKSGSRYGR 80
KCL GMS+ RYGR
Sbjct: 552 KCLSAGMSRDSVRYGR 567
>gi|1619314|emb|CAA69930.1| nuclear orphan receptor ROR-alpha 4 [Mus musculus]
Length = 459
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 10 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 68
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 69 KCLAVGMSRDAVKFGRMS 86
>gi|50293047|gb|AAT72914.1| estrogen receptor alpha [Fundulus heteroclitus]
Length = 573
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I++ R SC++CRLR
Sbjct: 145 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDRNRRKSCQACRLR 203
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 204 KCYEVGMMKGGVRKER 219
>gi|47225829|emb|CAF98309.1| unnamed protein product [Tetraodon nigroviridis]
Length = 459
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 9 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYS-CPRQKNCLIDRTSRNRCQHCRLQ 67
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 68 KCLAVGMSRDAVKFGRMS 85
>gi|402874470|ref|XP_003901060.1| PREDICTED: nuclear receptor ROR-alpha isoform 3 [Papio anubis]
Length = 524
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 74 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 132
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 133 KCLAVGMSRDAVKFGRMS 150
>gi|395746808|ref|XP_003778514.1| PREDICTED: nuclear receptor ROR-alpha isoform 4 [Pongo abelii]
Length = 525
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 75 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 133
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 134 KCLAVGMSRDAVKFGRMS 151
>gi|397515466|ref|XP_003827972.1| PREDICTED: nuclear receptor ROR-alpha isoform 4 [Pan paniscus]
Length = 525
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 75 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 133
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 134 KCLAVGMSRDAVKFGRMS 151
>gi|345306534|ref|XP_001510767.2| PREDICTED: nuclear receptor ROR-alpha-like [Ornithorhynchus
anatinus]
Length = 657
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 207 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 265
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 266 KCLAVGMSRDAVKFGRMS 283
>gi|7305439|ref|NP_038674.1| nuclear receptor ROR-alpha [Mus musculus]
gi|1710637|sp|P51448.1|RORA_MOUSE RecName: Full=Nuclear receptor ROR-alpha; AltName: Full=Nuclear
receptor RZR-alpha; AltName: Full=Nuclear receptor
subfamily 1 group F member 1; AltName:
Full=Retinoid-related orphan receptor-alpha
gi|1289326|gb|AAC52513.1| ROR-alpha 1 [Mus musculus]
gi|148694214|gb|EDL26161.1| RAR-related orphan receptor alpha [Mus musculus]
Length = 523
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 73 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 131
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 132 KCLAVGMSRDAVKFGRMS 149
>gi|19743901|ref|NP_599022.1| nuclear receptor ROR-alpha isoform b [Homo sapiens]
gi|548814|sp|P35398.1|RORA_HUMAN RecName: Full=Nuclear receptor ROR-alpha; AltName: Full=Nuclear
receptor RZR-alpha; AltName: Full=Nuclear receptor
subfamily 1 group F member 1; AltName:
Full=Retinoid-related orphan receptor-alpha
gi|451566|gb|AAA62659.1| RORalpha2 [Homo sapiens]
gi|119598002|gb|EAW77596.1| RAR-related orphan receptor A, isoform CRA_d [Homo sapiens]
Length = 556
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 106 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 164
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 165 KCLAVGMSRDAVKFGRMS 182
>gi|17942647|pdb|1HLZ|A Chain A, Crystal Structure Of The Orphan Nuclear Receptor Rev-
Erb(Alpha) Dna-Binding Domain Bound To Its Cognate
Response Element
gi|17942648|pdb|1HLZ|B Chain B, Crystal Structure Of The Orphan Nuclear Receptor Rev-
Erb(Alpha) Dna-Binding Domain Bound To Its Cognate
Response Element
gi|17942651|pdb|1GA5|A Chain A, Crystal Structure Of The Orphan Nuclear Receptor Rev-
Erb(Alpha) Dna-Binding Domain Bound To Its Cognate
Response Element
gi|17942652|pdb|1GA5|B Chain B, Crystal Structure Of The Orphan Nuclear Receptor Rev-
Erb(Alpha) Dna-Binding Domain Bound To Its Cognate
Response Element
gi|17942653|pdb|1GA5|E Chain E, Crystal Structure Of The Orphan Nuclear Receptor Rev-
Erb(Alpha) Dna-Binding Domain Bound To Its Cognate
Response Element
gi|17942654|pdb|1GA5|F Chain F, Crystal Structure Of The Orphan Nuclear Receptor Rev-
Erb(Alpha) Dna-Binding Domain Bound To Its Cognate
Response Element
gi|157838075|pdb|1A6Y|A Chain A, Reverba Orphan Nuclear ReceptorDNA COMPLEX
gi|157838076|pdb|1A6Y|B Chain B, Reverba Orphan Nuclear ReceptorDNA COMPLEX
Length = 94
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 47/80 (58%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+
Sbjct: 6 MVLLCKVCGDVASGFHYGVLACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQ 65
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS+ R+GR
Sbjct: 66 CRFKKCLSVGMSRDAVRFGR 85
>gi|395502591|ref|XP_003755662.1| PREDICTED: nuclear receptor ROR-alpha [Sarcophilus harrisii]
Length = 538
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 88 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 146
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 147 KCLAVGMSRDAVKFGRMS 164
>gi|47825369|ref|NP_001001460.1| peroxisome proliferator-activated receptor gamma [Gallus gallus]
gi|326927823|ref|XP_003210088.1| PREDICTED: peroxisome proliferator-activated receptor gamma-like
[Meleagris gallopavo]
gi|8843931|gb|AAF80170.1|AF163811_1 peroxisome proliferator-activated receptor gamma [Gallus gallus]
gi|8953747|dbj|BAA98100.1| peroxisome proliferator-activated receptor [Gallus gallus]
gi|19110867|gb|AAL85323.1| peroxisome proliferator-activated receptor gamma [Gallus gallus]
Length = 475
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>gi|426400510|gb|AFV36367.2| estrogen receptor beta 2 [Thamnaconus septentrionalis]
Length = 662
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 176 CAVCHDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 234
Query: 65 KCLMVGMSKSGSRYGRRS 82
KC VGM K G R R S
Sbjct: 235 KCYEVGMMKCGVRRERCS 252
>gi|148226176|ref|NP_001088831.1| peroxisome proliferator-activated receptor alpha [Xenopus laevis]
gi|56388558|gb|AAH87622.1| LOC496107 protein [Xenopus laevis]
Length = 469
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/108 (41%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G CEGCK FF R+ +C+ C I KKNR C+ CR
Sbjct: 104 CRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLVYDQCE--RMCKIQKKNRNKCQYCRFE 161
Query: 65 KCLMVGMSKSGSRYGR--RSNWFKI--HCLLQEQQQQAEQQTERTKLG 108
KCL VGMS + R+GR RS K+ L+ +Q + Q T+ L
Sbjct: 162 KCLNVGMSHNAIRFGRMPRSEKAKLKAEVLMCDQDVKDTQMTDLLSLA 209
>gi|410951776|ref|XP_003982569.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 2
[Felis catus]
Length = 615
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 134 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 192
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 193 LKKCLEMGMKMESVQSERK 211
>gi|297263119|ref|XP_002798750.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 2
[Macaca mulatta]
Length = 648
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 167 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 225
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 226 LKKCLEMGMKMESVQSERK 244
>gi|13274548|gb|AAK17973.1|AF332202_1 nuclear receptor NHR-23 [Caenorhabditis elegans]
Length = 573
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C C++++ NR C+ CRL+
Sbjct: 148 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSIVNY-QCPRQKNCVVDRVNRNRCQYCRLK 206
Query: 65 KCLMVGMSKSGSRYGRRS 82
KC+ +GMS+ ++GR S
Sbjct: 207 KCIELGMSRDAVKFGRMS 224
>gi|395827581|ref|XP_003786978.1| PREDICTED: steroid hormone receptor ERR2 [Otolemur garnettii]
Length = 433
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C NEC I K+ R SC++CR
Sbjct: 103 CLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYS-CPATNECEITKRRRKSCQACRFM 161
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 162 KCLKVGMLKEGVRLDR 177
>gi|350591453|ref|XP_003132435.3| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 1
[Sus scrofa]
Length = 596
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 115 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 173
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 174 LKKCLEMGMKMESVQSERK 192
>gi|332235835|ref|XP_003267110.1| PREDICTED: nuclear receptor ROR-alpha isoform 3 [Nomascus
leucogenys]
Length = 525
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 75 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 133
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 134 KCLAVGMSRDAVKFGRMS 151
>gi|350591455|ref|XP_003483272.1| PREDICTED: nuclear receptor subfamily 2 group C member 2 isoform 2
[Sus scrofa]
Length = 609
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 128 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 186
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 187 LKKCLEMGMKMESVQSERK 205
>gi|301775172|ref|XP_002923008.1| PREDICTED: nuclear receptor ROR-alpha-like [Ailuropoda melanoleuca]
Length = 509
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 59 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 117
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 118 KCLAVGMSRDAVKFGRMS 135
>gi|259013197|ref|NP_001158348.1| peroxisome proliferator-activated receptor gamma [Oryzias latipes]
gi|229619550|dbj|BAH58105.1| peroxisome proliferator-activated receptor gamma [Oryzias latipes]
Length = 531
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VCG+ A+GFH+G CEGCK FF R+ C + C I+KK+R C+
Sbjct: 128 LNIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLVYDHC--DLHCRIHKKSRNKCQY 185
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 186 CRFQKCLNVGMSHNAIRFGR 205
>gi|432861682|ref|XP_004069686.1| PREDICTED: nuclear receptor ROR-alpha-like [Oryzias latipes]
Length = 519
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 69 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYS-CPRQKNCLIDRTSRNRCQHCRLQ 127
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 128 KCLAVGMSRDAVKFGRMS 145
>gi|355707861|gb|AES03087.1| nuclear receptor subfamily 1, group D, member 1 [Mustela putorius
furo]
Length = 619
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS C N C I + NR C+ CR +
Sbjct: 135 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFK 194
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS+ R+GR
Sbjct: 195 KCLSVGMSRDAVRFGR 210
>gi|327265992|ref|XP_003217791.1| PREDICTED: nuclear receptor subfamily 2 group C member 2-like
[Anolis carolinensis]
Length = 629
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 148 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 206
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 207 LKKCLEMGMKMESVQSERK 225
>gi|193885514|gb|ACF28457.1| estrogen receptor alpha [Lepidochelys olivacea]
Length = 588
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 61/101 (60%), Gaps = 12/101 (11%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 179 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 234
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQT 102
RLRKC VGM K G R RR +L+ ++Q+ EQ
Sbjct: 235 RLRKCYEVGMMKGGIRKDRRGGR-----MLKYKRQREEQDA 270
>gi|42412383|gb|AAS15571.1| estrogen receptor-related receptor beta short form [Homo sapiens]
Length = 433
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C NEC I K+ R SC++CR
Sbjct: 103 CLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYS-CPATNECEITKRRRKSCQACRFM 161
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 162 KCLKVGMLKEGVRLDR 177
>gi|355786362|gb|EHH66545.1| hypothetical protein EGM_03558, partial [Macaca fascicularis]
Length = 572
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 91 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 149
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 150 LKKCLEMGMKMESVQSERK 168
>gi|84043322|gb|ABC50163.1| peroxisome proliferator-activated receptor gamma [Rachycentron
canadum]
gi|157418573|gb|ABV55020.1| peroxisome proliferator-activated receptor gamma [Rachycentron
canadum]
Length = 531
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VCG+ A+GFH+G CEGCK FF R+ C + C I+KK+R C+
Sbjct: 128 LNIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLVYDHC--DLHCRIHKKSRNKCQY 185
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 186 CRFQKCLNVGMSHNAIRFGR 205
>gi|410908014|ref|XP_003967486.1| PREDICTED: nuclear receptor ROR-alpha-like [Takifugu rubripes]
Length = 519
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 69 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYS-CPRQKNCLIDRTSRNRCQHCRLQ 127
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 128 KCLAVGMSRDAVKFGRMS 145
>gi|348523311|ref|XP_003449167.1| PREDICTED: vitamin D3 receptor A-like [Oreochromis niloticus]
Length = 448
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A GFHF A TCEGCK FF RS S + C N C I K NR C++CR
Sbjct: 50 RICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFT-CPFNGSCTITKDNRRHCQACR 108
Query: 63 LRKCLMVGMSK 73
L++C+ +GM K
Sbjct: 109 LKRCIDIGMMK 119
>gi|334314429|ref|XP_001374269.2| PREDICTED: nuclear receptor ROR-alpha [Monodelphis domestica]
Length = 528
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 78 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 136
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 137 KCLAVGMSRDAVKFGRMS 154
>gi|58007248|gb|AAT85618.1| peroxisome proliferator-activated receptor gamma [Sparus aurata]
Length = 522
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VCG+ A+GFH+G CEGCK FF R+ C + C I+KK+R C+
Sbjct: 128 LNIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLVYDHC--DLHCRIHKKSRNKCQY 185
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 186 CRFQKCLNVGMSHNAIRFGR 205
>gi|33386560|emb|CAD62449.1| peroxisome proliferator-activated receptor gamma [Pleuronectes
platessa]
Length = 532
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VCG+ A+GFH+G CEGCK FF R+ C + C I+KK+R C+
Sbjct: 128 LNIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLVYDHC--DLHCRIHKKSRNKCQY 185
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 186 CRFQKCLNVGMSHNAIRFGR 205
>gi|431896654|gb|ELK06066.1| Nuclear receptor ROR-gamma [Pteropus alecto]
Length = 771
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C I++ +R C+ CRL+
Sbjct: 241 CKICGDKSSGIHYGVITCEGCKGFFRRSQHCNVAYS-CTRQRNCPIDRTSRNRCQHCRLQ 299
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 300 KCLALGMSRDAVKFGRMS 317
>gi|60101768|gb|AAX14000.1| estrogen receptor beta [Oryzias javanicus]
Length = 563
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 157 CAVCHDYASGYHYGVWSCEGCKAFFKRSIQGHTDYI-CPATNQCTIDKNRRKSCQACRLR 215
Query: 65 KCLMVGMSKSGSRYGRRS 82
KC VGM+K G R R S
Sbjct: 216 KCYEVGMTKCGVRKERGS 233
>gi|348505860|ref|XP_003440478.1| PREDICTED: nuclear receptor ROR-alpha-like [Oreochromis niloticus]
Length = 519
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 69 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYS-CPRQKNCLIDRTSRNRCQHCRLQ 127
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 128 KCLAVGMSRDAVKFGRMS 145
>gi|348530304|ref|XP_003452651.1| PREDICTED: nuclear receptor ROR-alpha-like [Oreochromis niloticus]
Length = 526
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 64 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 122
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 123 KCLAVGMSRDAVKFGRMS 140
>gi|157679168|dbj|BAF80459.1| peroxisome proliferator-activated receptor gamma [Pagrus major]
Length = 522
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C+VCG+ A+GFH+G CEGCK FF R+ C + C I+KK+R C+
Sbjct: 128 LNIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLVYDHC--DLHCRIHKKSRNKCQY 185
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 186 CRFQKCLNVGMSHNAIRFGR 205
>gi|71980506|ref|NP_001020975.1| Protein NHR-23, isoform a [Caenorhabditis elegans]
gi|24418858|sp|P41828.2|NHR23_CAEEL RecName: Full=Nuclear hormone receptor family member nhr-23;
AltName: Full=Steroid hormone receptor family member
chr-3
gi|13274550|gb|AAK17974.1|AF332203_1 nuclear receptor NHR-23 [Caenorhabditis elegans]
gi|6434252|emb|CAA95782.2| Protein NHR-23, isoform a [Caenorhabditis elegans]
Length = 588
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C C++++ NR C+ CRL+
Sbjct: 163 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSIVNY-QCPRQKNCVVDRVNRNRCQYCRLK 221
Query: 65 KCLMVGMSKSGSRYGRRS 82
KC+ +GMS+ ++GR S
Sbjct: 222 KCIELGMSRDAVKFGRMS 239
>gi|426379299|ref|XP_004056338.1| PREDICTED: nuclear receptor ROR-alpha isoform 2 [Gorilla gorilla
gorilla]
Length = 525
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 75 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 133
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 134 KCLAVGMSRDAVKFGRMS 151
>gi|363737943|ref|XP_413763.3| PREDICTED: nuclear receptor ROR-alpha [Gallus gallus]
Length = 524
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS + + S C C+I++ +R C+ CRL+
Sbjct: 74 CKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYS-CPRQKNCLIDRTSRNRCQHCRLQ 132
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL VGMS+ ++GR S
Sbjct: 133 KCLAVGMSRDAVKFGRMS 150
>gi|52843268|gb|AAU88063.1| estrogen receptor-related receptor short isoform [Branchiostoma
floridae]
Length = 455
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+GFH+G +CE CK+FF R+ S C NEC I K+ R SC++CR
Sbjct: 108 CLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYS-CPATNECEITKRRRKSCQACRFT 166
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 167 KCLKVGMLKEGVRLDR 182
>gi|24660692|ref|NP_729340.1| estrogen-related receptor, isoform A [Drosophila melanogaster]
gi|17225790|gb|AAL37553.1|AF359420_1 estrogen-related receptor [Drosophila melanogaster]
gi|7295148|gb|AAF50473.1| estrogen-related receptor, isoform A [Drosophila melanogaster]
gi|15291575|gb|AAK93056.1| GH28308p [Drosophila melanogaster]
gi|220943306|gb|ACL84196.1| ERR-PA [synthetic construct]
gi|220953294|gb|ACL89190.1| ERR-PA [synthetic construct]
Length = 484
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ + C VCG+ A+GFH+G +CE CK+FF R+ + C NNEC INK+ R +C++
Sbjct: 111 LRRLCLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYT-CPANNECEINKRRRKACQA 169
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL++GM K G R R
Sbjct: 170 CRFQKCLLMGMLKEGVRLDR 189
>gi|373938666|gb|AEY79496.1| peroxisome proliferator activated receptor gamma 1b [Bubalus
bubalis]
Length = 475
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G CEGCK FF R+ C +N C I+KK+R C+ CR +
Sbjct: 109 CRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDHN--CRIHKKSRNKCQYCRFQ 166
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGMS + +R+ R
Sbjct: 167 KCLAVGMSHNANRFRR 182
>gi|359069796|ref|XP_002691167.2| PREDICTED: steroid hormone receptor ERR2 isoform 1 [Bos taurus]
Length = 433
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C NEC I K+ R SC++CR
Sbjct: 103 CLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYS-CPATNECEITKRRRKSCQACRFM 161
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 162 KCLKVGMLKEGVRLDR 177
>gi|195012346|ref|XP_001983597.1| GH15984 [Drosophila grimshawi]
gi|193897079|gb|EDV95945.1| GH15984 [Drosophila grimshawi]
Length = 491
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ + C VCG+ A+GFH+G +CE CK+FF R+ + C NNEC INK+ R +C++
Sbjct: 114 LRRLCLVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYT-CPANNECEINKRRRKACQA 172
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL++GM K G R R
Sbjct: 173 CRFQKCLLMGMLKEGVRLDR 192
>gi|229606097|ref|NP_001153457.1| vitamin D3 receptor B [Danio rerio]
gi|190411624|sp|Q1L673.2|VDRB_DANRE RecName: Full=Vitamin D3 receptor B; Short=VDR-B; AltName:
Full=1,25-dihydroxyvitamin D3 receptor B; AltName:
Full=Nuclear receptor subfamily 1 group I member 1-B
Length = 422
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/71 (52%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A GFHF A TCEGCK FF RS S + C N C I K NR C++CR
Sbjct: 21 RICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFT-CPFNGSCTITKDNRRHCQACR 79
Query: 63 LRKCLMVGMSK 73
L++CL +GM K
Sbjct: 80 LKRCLDIGMMK 90
>gi|355778665|gb|EHH63701.1| hypothetical protein EGM_16722 [Macaca fascicularis]
Length = 530
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 149 CAVCSDFASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 207
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K GSR R
Sbjct: 208 KCYEVGMVKCGSRRER 223
>gi|345803722|ref|XP_547920.3| PREDICTED: steroid hormone receptor ERR2 isoform 1 [Canis lupus
familiaris]
Length = 433
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C NEC I K+ R SC++CR
Sbjct: 103 CLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYS-CPATNECEITKRRRKSCQACRFM 161
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 162 KCLKVGMLKEGVRLDR 177
>gi|164551865|gb|ABY60988.1| estrogen receptor beta 2 [Acanthopagrus schlegelii]
Length = 667
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 179 CAVCQDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 237
Query: 65 KCLMVGMSKSGSRYGRRS 82
KC VGM K G R R S
Sbjct: 238 KCYEVGMMKCGVRRERCS 255
>gi|68132044|gb|AAY85288.1| VDR-B [Danio rerio]
Length = 419
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/71 (52%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A GFHF A TCEGCK FF RS S + C N C I K NR C++CR
Sbjct: 18 RICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFT-CPFNGSCTITKDNRRHCQACR 76
Query: 63 LRKCLMVGMSK 73
L++CL +GM K
Sbjct: 77 LKRCLDIGMMK 87
>gi|395516672|ref|XP_003762511.1| PREDICTED: nuclear receptor subfamily 2 group C member 2
[Sarcophilus harrisii]
Length = 629
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
+ C VCG+ A+G H+GA +CEGCK FF RS + S C++N +CIINK +R C+ CR
Sbjct: 148 EYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYS-CRSNQDCIINKHHRNRCQFCR 206
Query: 63 LRKCLMVGMSKSGSRYGRR 81
L+KCL +GM + R+
Sbjct: 207 LKKCLEMGMKMESVQSERK 225
>gi|326678036|ref|XP_699900.5| PREDICTED: peroxisome proliferator-activated receptor delta [Danio
rerio]
Length = 467
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+N C++CG+ A+GFH+G CEGCK FF R+ C+ + C I KK+R C+
Sbjct: 96 INMECRICGDRASGFHYGVHACEGCKGFFRRTIRMKLEYERCERS--CKIQKKSRNKCQF 153
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCLM+GMS RYGR
Sbjct: 154 CRFQKCLMLGMSHDAIRYGR 173
>gi|410916641|ref|XP_003971795.1| PREDICTED: estrogen receptor-like isoform 1 [Takifugu rubripes]
Length = 622
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I++ R SC++CRLR
Sbjct: 190 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDRNRRKSCQACRLR 248
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 249 KCYEVGMMKGGVRKDR 264
>gi|85013465|gb|ABC68615.1| estrogen receptor alpha [Kryptolebias marmoratus]
Length = 648
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I++ R SC++CRLR
Sbjct: 185 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDRNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 244 KCYEVGMMKGGVRKDR 259
>gi|410916643|ref|XP_003971796.1| PREDICTED: estrogen receptor-like isoform 2 [Takifugu rubripes]
Length = 616
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I++ R SC++CRLR
Sbjct: 184 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDRNRRKSCQACRLR 242
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 243 KCYEVGMMKGGVRKDR 258
>gi|186908731|gb|ACC94156.1| estrogen receptor [Platynereis dumerilii]
Length = 496
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCR 62
Q C++C + A+GFH+G ++CEGCK+FF RS + P C N C I+K R SC++CR
Sbjct: 50 QKCQICSDLASGFHYGVWSCEGCKAFFKRSLQD-PVDYVCPATNNCTIDKHRRKSCQACR 108
Query: 63 LRKCLMVGMSKSGSR 77
RKCL VGM K R
Sbjct: 109 FRKCLEVGMMKRRER 123
>gi|431839148|gb|ELK01075.1| Steroid hormone receptor ERR2 [Pteropus alecto]
Length = 443
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VCG+ A+G+H+G +CE CK+FF R+ S C NEC I K+ R SC++CR
Sbjct: 103 CLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYS-CPATNECEITKRRRKSCQACRFM 161
Query: 65 KCLMVGMSKSGSRYGR 80
KCL VGM K G R R
Sbjct: 162 KCLKVGMLKEGVRLDR 177
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.133 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,223,627,502
Number of Sequences: 23463169
Number of extensions: 84858454
Number of successful extensions: 326636
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7479
Number of HSP's successfully gapped in prelim test: 295
Number of HSP's that attempted gapping in prelim test: 311220
Number of HSP's gapped (non-prelim): 9029
length of query: 139
length of database: 8,064,228,071
effective HSP length: 104
effective length of query: 35
effective length of database: 9,919,025,791
effective search space: 347165902685
effective search space used: 347165902685
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)