BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16683
(139 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P13054|KNRL_DROME Knirps-related protein OS=Drosophila melanogaster GN=knrl PE=2 SV=1
Length = 647
Score = 195 bits (495), Expect = 8e-50, Method: Composition-based stats.
Identities = 85/91 (93%), Positives = 89/91 (97%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNL SIS+CKNN ECIINKKNRT+CK+
Sbjct: 10 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISDCKNNGECIINKKNRTACKA 69
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLL 91
CRL+KCLMVGMSKSGSRYGRRSNWFKIHCLL
Sbjct: 70 CRLKKCLMVGMSKSGSRYGRRSNWFKIHCLL 100
>sp|P10734|KNIR_DROME Zygotic gap protein knirps OS=Drosophila melanogaster GN=kni PE=1
SV=1
Length = 429
Score = 189 bits (480), Expect = 4e-48, Method: Composition-based stats.
Identities = 82/96 (85%), Positives = 89/96 (92%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNN+ +ISECKN +CII+KKNRT+CK+
Sbjct: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNEGKCIIDKKNRTTCKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQ 96
CRLRKC VGMSK GSRYGRRSNWFKIHCLLQE +Q
Sbjct: 61 CRLRKCYNVGMSKGGSRYGRRSNWFKIHCLLQEHEQ 96
>sp|Q24753|KNIR_DROVI Zygotic gap protein knirps OS=Drosophila virilis GN=kni PE=3 SV=1
Length = 481
Score = 189 bits (479), Expect = 5e-48, Method: Composition-based stats.
Identities = 82/96 (85%), Positives = 90/96 (93%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNN+ +ISECKN+ +CII+KKNRT+CK+
Sbjct: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKNDGKCIIDKKNRTTCKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQ 96
CRLRKC VGMSK GSRYGRRSNWFKIHCLLQE +Q
Sbjct: 61 CRLRKCYNVGMSKGGSRYGRRSNWFKIHCLLQEHEQ 96
>sp|P15370|EGON_DROME Protein embryonic gonad OS=Drosophila melanogaster GN=eg PE=2
SV=2
Length = 373
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 81/95 (85%), Positives = 91/95 (95%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
MNQ CKVCGEPAAGFHFGAFTCEGCKSFFGR+YNN+ +I+ CK+N +C+INKKNRT+CK+
Sbjct: 1 MNQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAGCKHNGDCVINKKNRTACKA 60
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
CRLRKCL+VGMSKSGSRYGRRSNWFKIHCLLQEQQ
Sbjct: 61 CRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQQ 95
>sp|O01639|E75_CHOFU Ecdysone-inducible protein E75 OS=Choristoneura fumiferana GN=E75
PE=2 SV=1
Length = 690
Score = 96.7 bits (239), Expect = 4e-20, Method: Composition-based stats.
Identities = 43/107 (40%), Positives = 58/107 (54%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 47 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 106
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPD 111
KC+ VGMS+ R+GR K L QQ + + E+ D
Sbjct: 107 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELD 153
>sp|P50239|E75_GALME Ecdysone-inducible protein E75 OS=Galleria mellonella GN=E75 PE=2
SV=1
Length = 711
Score = 95.9 bits (237), Expect = 7e-20, Method: Composition-based stats.
Identities = 45/115 (39%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 47 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 106
Query: 65 KCLMVGMSKSGSRYGR--RSNWFKIHCLLQEQQQQAEQQTERTKLGH-PDLLLKL 116
KC+ VGMS+ R+GR + +I +Q +A +Q +L P LL ++
Sbjct: 107 KCIAVGMSRDAVRFGRVPKREKARILAAMQSSTTRAHEQAAAAELDDGPRLLARV 161
>sp|Q08893|E75_MANSE Ecdysone-inducible protein E75 OS=Manduca sexta GN=E75 PE=2 SV=2
Length = 699
Score = 95.5 bits (236), Expect = 8e-20, Method: Composition-based stats.
Identities = 43/107 (40%), Positives = 57/107 (53%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 45 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 104
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPD 111
KC+ VGMS+ R+GR K L QQ + E+ D
Sbjct: 105 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSSTSRAHEQAAAAELD 151
>sp|P13055|E75BB_DROME Ecdysone-induced protein 75B, isoform B OS=Drosophila melanogaster
GN=Eip75B PE=2 SV=2
Length = 1412
Score = 94.7 bits (234), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 458 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 517
Query: 65 KCLMVGMSKSGSRYGR---RSNWFKIHCLLQEQQQQAEQQTERTKL-GHPDLL 113
KC+ VGMS+ R+GR R + + Q Q + +Q+ T+L P LL
Sbjct: 518 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPRLL 570
>sp|P17671|E75BC_DROME Ecdysone-induced protein 75B, isoforms C/D OS=Drosophila
melanogaster GN=Eip75B PE=2 SV=2
Length = 1199
Score = 94.7 bits (234), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 245 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 304
Query: 65 KCLMVGMSKSGSRYGR---RSNWFKIHCLLQEQQQQAEQQTERTKL-GHPDLL 113
KC+ VGMS+ R+GR R + + Q Q + +Q+ T+L P LL
Sbjct: 305 KCIAVGMSRDAVRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPRLL 357
>sp|P49868|HR3_GALME Probable nuclear hormone receptor HR3 OS=Galleria mellonella GN=HR3
PE=2 SV=1
Length = 557
Score = 92.4 bits (228), Expect = 8e-19, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS + + + +C N C++++ NR C+ CRL+
Sbjct: 108 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACVVDRVNRNRCQYCRLQ 166
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 167 KCLKLGMSRDAVKFGRMS 184
>sp|P81559|ESR1_XENLA Estrogen receptor OS=Xenopus laevis GN=esr1 PE=2 SV=1
Length = 586
Score = 91.3 bits (225), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 180 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 238
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQ 97
KC VGM K G R RR H +E+Q+Q
Sbjct: 239 KCYEVGMMKGGIRKDRRGGRLLKHKRQKEEQEQ 271
>sp|Q08882|HR3_MANSE Probable nuclear hormone receptor HR3 OS=Manduca sexta GN=HR3 PE=2
SV=1
Length = 548
Score = 91.3 bits (225), Expect = 1e-18, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS + + + +C N C++++ NR C+ CRL+
Sbjct: 104 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSTVVNY-QCPRNKACVVDRVNRNRCQYCRLQ 162
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 163 KCLKLGMSRDAVKFGRMS 180
>sp|Q9XUK7|NHR85_CAEEL Nuclear hormone receptor family member nhr-85 OS=Caenorhabditis
elegans GN=nhr-85 PE=2 SV=2
Length = 514
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VC + A+GFH+G F CEGCK FF RS + C +C+I + NR C+ CRL+
Sbjct: 113 CQVCSDKASGFHYGVFACEGCKGFFRRSIQQKITYRACTRAEDCLILRNNRNRCQCCRLK 172
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLG 108
KCL VGMS+ R+GR K E+ Q+ Q++R ++
Sbjct: 173 KCLAVGMSRDAVRFGRVPKREKARMF--EEMQKTNVQSQRDQIA 214
>sp|O77245|E75_METEN Nuclear hormone receptor E75 OS=Metapenaeus ensis GN=E75 PE=2 SV=1
Length = 606
Score = 91.3 bits (225), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/104 (43%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C+VCG+ A+GFH+G +CEGCK FF RS C N +C I + NR C+ CRL+
Sbjct: 32 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLK 91
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLG 108
KC+ VGMS+ R+GR K L Q A+ Q ER L
Sbjct: 92 KCIAVGMSRDAVRFGRVPKREKAKILAAMQSVNAKSQ-ERAVLA 134
>sp|P31396|HR3_DROME Probable nuclear hormone receptor HR3 OS=Drosophila melanogaster
GN=Hr46 PE=2 SV=1
Length = 487
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ ++G H+G TCEGCK FF RS +++ + +C N +C++++ NR C+ CRL+
Sbjct: 51 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNY-QCPRNKQCVVDRVNRNRCQYCRLQ 109
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 110 KCLKLGMSRDAVKFGRMS 127
>sp|Q53AD2|ESR1_FELCA Estrogen receptor OS=Felis catus GN=ESR1 PE=2 SV=1
Length = 595
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ + E + E
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDEGEGRNE 279
>sp|P49884|ESR1_BOVIN Estrogen receptor OS=Bos taurus GN=ESR1 PE=1 SV=3
Length = 596
Score = 88.2 bits (217), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/104 (41%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 186 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 244
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLG 108
KC VGM K G R RR H + Q+ E + E G
Sbjct: 245 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRNEAVPSG 285
>sp|Q5BJR8|RXRG_RAT Retinoic acid receptor RXR-gamma OS=Rattus norvegicus GN=Rxrg PE=2
SV=1
Length = 463
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECASTGHEDM 234
>sp|Q29040|ESR1_PIG Estrogen receptor OS=Sus scrofa GN=ESR1 PE=1 SV=1
Length = 595
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/104 (41%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLG 108
KC VGM K G R RR H + Q+ E + E G
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRNEAVPPG 284
>sp|P45446|RORB_RAT Nuclear receptor ROR-beta OS=Rattus norvegicus GN=Rorb PE=1 SV=3
Length = 470
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 21 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 79
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 80 KCLALGMSRDAVKFGRMS 97
>sp|Q92753|RORB_HUMAN Nuclear receptor ROR-beta OS=Homo sapiens GN=RORB PE=2 SV=3
Length = 470
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 21 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 79
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 80 KCLALGMSRDAVKFGRMS 97
>sp|Q9TV98|ESR1_HORSE Estrogen receptor OS=Equus caballus GN=ESR1 PE=2 SV=1
Length = 594
Score = 87.4 bits (215), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRNE 279
>sp|Q8R1B8|RORB_MOUSE Nuclear receptor ROR-beta OS=Mus musculus GN=Rorb PE=2 SV=3
Length = 470
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CK+CG+ ++G H+G TCEGCK FF RS N S S C C+I++ NR C+ CRL+
Sbjct: 21 CKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYS-CPRQRNCLIDRTNRNRCQHCRLQ 79
Query: 65 KCLMVGMSKSGSRYGRRS 82
KCL +GMS+ ++GR S
Sbjct: 80 KCLALGMSRDAVKFGRMS 97
>sp|P03372|ESR1_HUMAN Estrogen receptor OS=Homo sapiens GN=ESR1 PE=1 SV=2
Length = 595
Score = 87.0 bits (214), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 244 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDGEGRGE 279
>sp|Q5REL6|RXRG_PONAB Retinoic acid receptor RXR-gamma OS=Pongo abelii GN=RXRG PE=2 SV=1
Length = 463
Score = 87.0 bits (214), Expect = 3e-17, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECASSGHEDM 234
>sp|P48443|RXRG_HUMAN Retinoic acid receptor RXR-gamma OS=Homo sapiens GN=RXRG PE=1 SV=1
Length = 463
Score = 86.7 bits (213), Expect = 4e-17, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECATSGHEDM 234
>sp|Q0GFF6|RXRG_PIG Retinoic acid receptor RXR-gamma OS=Sus scrofa GN=RXRG PE=2 SV=2
Length = 463
Score = 86.7 bits (213), Expect = 4e-17, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECASSGHEDM 234
>sp|Q14995|NR1D2_HUMAN Nuclear receptor subfamily 1 group D member 2 OS=Homo sapiens
GN=NR1D2 PE=1 SV=3
Length = 579
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>sp|Q0VC20|RXRG_BOVIN Retinoic acid receptor RXR-gamma OS=Bos taurus GN=RXRG PE=2 SV=1
Length = 463
Score = 86.7 bits (213), Expect = 4e-17, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
+ C +CG+ ++G H+G ++CEGCK FF R+ I C++N +C+I+K+ R C+
Sbjct: 135 VKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRK-DLIYTCRDNKDCLIDKRQRNRCQY 193
Query: 61 CRLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGHPDL 112
CR +KCL++GM + + R Q +++AE + E GH D+
Sbjct: 194 CRYQKCLVMGMKREAVQEER-----------QRSRERAESEAECANSGHEDM 234
>sp|Q60674|NR1D2_MOUSE Nuclear receptor subfamily 1 group D member 2 OS=Mus musculus
GN=Nr1d2 PE=1 SV=1
Length = 576
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>sp|P06211|ESR1_RAT Estrogen receptor OS=Rattus norvegicus GN=Esr1 PE=1 SV=1
Length = 600
Score = 86.3 bits (212), Expect = 5e-17, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 190 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 248
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTE 103
KC VGM K G R RR H + Q+ E + E
Sbjct: 249 KCYEVGMMKGGIRKDRRGGRMLKH---KRQRDDLEGRNE 284
>sp|Q9QZJ5|ESR1_MESAU Estrogen receptor OS=Mesocricetus auratus GN=ESR1 PE=2 SV=1
Length = 595
Score = 86.3 bits (212), Expect = 5e-17, Method: Composition-based stats.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 185 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 243
Query: 65 KCLMVGMSKSGSRYGRR 81
KC VGM K G R RR
Sbjct: 244 KCYEVGMMKGGIRKDRR 260
>sp|Q63504|NR1D2_RAT Nuclear receptor subfamily 1 group D member 2 OS=Rattus norvegicus
GN=Nr1d2 PE=2 SV=1
Length = 578
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
CKVCG+ A+GFH+G CEGCK FF RS +C N C I + NR C+ CR +
Sbjct: 103 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFK 162
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQ 94
KCL VGMS+ R+GR K L++ Q
Sbjct: 163 KCLSVGMSRDAVRFGRIPKREKQRMLIEMQ 192
>sp|P50240|ESR1_OREAU Estrogen receptor OS=Oreochromis aureus GN=esr1 PE=3 SV=2
Length = 583
Score = 85.9 bits (211), Expect = 6e-17, Method: Composition-based stats.
Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 7/105 (6%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 139 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 197
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKLGH 109
KC VGM K G R R L +E+ A++QT + H
Sbjct: 198 KCYEVGMMKGGMRKDRG------RVLRREKHGPAQRQTSQNLPTH 236
>sp|P19785|ESR1_MOUSE Estrogen receptor OS=Mus musculus GN=Esr1 PE=1 SV=1
Length = 599
Score = 85.9 bits (211), Expect = 7e-17, Method: Composition-based stats.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 189 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 247
Query: 65 KCLMVGMSKSGSRYGRR 81
KC VGM K G R RR
Sbjct: 248 KCYEVGMMKGGIRKDRR 264
>sp|O88275|PPARG_RAT Peroxisome proliferator-activated receptor gamma OS=Rattus
norvegicus GN=Pparg PE=1 SV=2
Length = 505
Score = 85.9 bits (211), Expect = 7e-17, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>sp|O18971|PPARG_BOVIN Peroxisome proliferator-activated receptor gamma OS=Bos taurus
GN=PPARG PE=2 SV=1
Length = 505
Score = 85.9 bits (211), Expect = 7e-17, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>sp|O62807|PPARG_PIG Peroxisome proliferator-activated receptor gamma OS=Sus scrofa
GN=PPARG PE=2 SV=1
Length = 504
Score = 85.5 bits (210), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 134 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 191
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 192 CRFQKCLAVGMSHNAIRFGR 211
>sp|P37238|PPARG_MOUSE Peroxisome proliferator-activated receptor gamma OS=Mus musculus
GN=Pparg PE=1 SV=3
Length = 505
Score = 85.5 bits (210), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>sp|O18924|PPARG_MACMU Peroxisome proliferator-activated receptor gamma OS=Macaca mulatta
GN=PPARG PE=2 SV=1
Length = 505
Score = 85.5 bits (210), Expect = 9e-17, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>sp|Q4U3Q4|PPARG_CANFA Peroxisome proliferator-activated receptor gamma OS=Canis
familiaris GN=PPARG PE=2 SV=1
Length = 505
Score = 85.5 bits (210), Expect = 9e-17, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>sp|P06212|ESR1_CHICK Estrogen receptor OS=Gallus gallus GN=ESR1 PE=2 SV=1
Length = 589
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 13/103 (12%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 179 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 234
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
RLRKC VGM K G R RR + +Q++Q E+Q R
Sbjct: 235 RLRKCYEVGMMKGGIRKDRRGGE------MMKQKRQREEQDSR 271
>sp|O08537|ESR2_MOUSE Estrogen receptor beta OS=Mus musculus GN=Esr2 PE=1 SV=3
Length = 530
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 24/145 (16%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 149 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----ICPATNQCTIDKNRRKSCQAC 204
Query: 62 RLRKCLMVGMSKSGSRYGR---------RSNWFKIHCLLQEQQQQAEQQTERTK------ 106
RLRKC VGM K GSR R RS ++HCL + ++ T R K
Sbjct: 205 RLRKCYEVGMVKCGSRRERCGYRIVRRQRSASEQVHCL--NKAKRTSGHTPRVKELLLNS 262
Query: 107 LGHPDLLLKLDKFTNNNTIVTNNNL 131
L L+L L + N +V+ ++
Sbjct: 263 LSPEQLVLTLLEAEPPNVLVSRPSM 287
>sp|P57783|ESR3_MICUN Estrogen receptor gamma OS=Micropogonias undulatus GN=esr3 PE=2
SV=1
Length = 565
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS + C NEC I+K R SC++CRLR
Sbjct: 169 CAVCHDYASGYHYGVWSCEGCKAFFKRSIQR-DNEYICPATNECTIDKNRRKSCQACRLR 227
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM+K G R R
Sbjct: 228 KCYEVGMTKCGMRKER 243
>sp|P37231|PPARG_HUMAN Peroxisome proliferator-activated receptor gamma OS=Homo sapiens
GN=PPARG PE=1 SV=3
Length = 505
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 135 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 192
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 193 CRFQKCLAVGMSHNAIRFGR 212
>sp|P57797|PPARG_CRIGR Peroxisome proliferator-activated receptor gamma OS=Cricetulus
griseus GN=PPARG PE=2 SV=1
Length = 475
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKS 60
M C+VCG+ A+GFH+G CEGCK FF R+ C N C I+KK+R C+
Sbjct: 105 MAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLN--CRIHKKSRNKCQY 162
Query: 61 CRLRKCLMVGMSKSGSRYGR 80
CR +KCL VGMS + R+GR
Sbjct: 163 CRFQKCLAVGMSHNAIRFGR 182
>sp|Q91250|ESR1_TAEGU Estrogen receptor OS=Taeniopygia guttata GN=ESR1 PE=2 SV=1
Length = 587
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 13/103 (12%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRS---YNNLPSISECKNNNECIINKKNRTSCKSC 61
C VC + A+G+H+G ++CEGCK+FF RS +N+ C N+C I+K R SC++C
Sbjct: 177 CAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDY----MCPATNQCTIDKNRRKSCQAC 232
Query: 62 RLRKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTER 104
RLRKC VGM K G R RR + +Q++Q E+Q R
Sbjct: 233 RLRKCYEVGMMKGGIRKDRRGG------RVMKQKRQREEQDSR 269
>sp|Q9TU15|ESR2_SHEEP Estrogen receptor beta OS=Ovis aries GN=ESR2 PE=2 SV=1
Length = 527
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/103 (41%), Positives = 61/103 (59%), Gaps = 10/103 (9%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 146 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 204
Query: 65 KCLMVGMSKSGSRYGR---------RSNWFKIHCLLQEQQQQA 98
KC VGM K GSR R R++ ++HCL + ++ A
Sbjct: 205 KCYEVGMVKCGSRRERCGYRIVRRQRNSDEQLHCLSKTKRNGA 247
>sp|Q9YH33|ESR1_ORENI Estrogen receptor OS=Oreochromis niloticus GN=esr1 PE=2 SV=1
Length = 585
Score = 84.7 bits (208), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 139 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM-CPATNQCTIDKNRRKSCQACRLR 197
Query: 65 KCLMVGMSKSGSRYGR 80
KC VGM K G R R
Sbjct: 198 KCYEVGMMKGGMRKDR 213
>sp|Q9W669|ESR21_CARAU Estrogen receptor beta-1 OS=Carassius auratus GN=esr2a PE=2 SV=1
Length = 568
Score = 84.7 bits (208), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/103 (41%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 5 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64
C VC + A+G+H+G ++CEGCK+FF RS C N+C I+K R SC++CRLR
Sbjct: 170 CAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYI-CPATNQCTIDKNRRKSCQACRLR 228
Query: 65 KCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAEQQTERTKL 107
KC VGM K G R R S QQ+ QQ T+
Sbjct: 229 KCYEVGMMKCGLRRDRSS-----------YQQRGAQQNRLTRF 260
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,459,953
Number of Sequences: 539616
Number of extensions: 2107733
Number of successful extensions: 10327
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 9189
Number of HSP's gapped (non-prelim): 730
length of query: 139
length of database: 191,569,459
effective HSP length: 104
effective length of query: 35
effective length of database: 135,449,395
effective search space: 4740728825
effective search space used: 4740728825
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)