Query psy16683
Match_columns 139
No_of_seqs 187 out of 1138
Neff 7.2
Searched_HMMs 13730
Date Fri Aug 16 19:20:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16683.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/16683hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1a6ya_ g.39.1.2 (A:) Orphan n 100.0 7E-33 5.1E-37 179.7 0.6 77 4-80 2-78 (78)
2 d1dszb_ g.39.1.2 (B:) Retinoid 100.0 6E-33 4.4E-37 182.3 -1.1 79 2-81 5-83 (84)
3 d1dsza_ g.39.1.2 (A:) Retinoic 100.0 3.5E-32 2.6E-36 175.2 -0.0 75 4-79 1-75 (75)
4 d2hanb1 g.39.1.2 (B:5-87) Ecdy 100.0 2.8E-32 2.1E-36 178.7 -0.6 80 3-83 1-80 (83)
5 d1kb2a_ g.39.1.2 (A:) Vitamin 100.0 2.9E-32 2.1E-36 180.8 -2.0 80 3-83 1-80 (89)
6 d2nllb_ g.39.1.2 (B:) Thyroid 100.0 6.3E-32 4.6E-36 183.7 -1.1 82 2-83 1-83 (103)
7 d1lo1a_ g.39.1.2 (A:) Steroid 100.0 2.7E-32 2E-36 181.2 -3.1 80 3-83 5-84 (90)
8 d1cita_ g.39.1.2 (A:) Orphan n 100.0 7.3E-31 5.3E-35 174.0 -0.4 80 3-83 1-80 (89)
9 d1r4ia_ g.39.1.2 (A:) Androgen 100.0 6.8E-31 5E-35 168.6 -0.9 73 2-75 2-74 (74)
10 d1lata_ g.39.1.2 (A:) Glucocor 100.0 1E-30 7.6E-35 166.6 -0.3 71 3-74 1-71 (71)
11 d1hcqa_ g.39.1.2 (A:) Estrogen 99.9 1.2E-29 8.4E-34 162.9 -0.1 70 2-72 4-73 (74)
12 d1dcqa2 g.45.1.1 (A:247-368) P 67.8 0.35 2.6E-05 31.3 -0.8 30 2-31 15-47 (122)
13 d1we9a_ g.50.1.2 (A:) PHD fing 61.5 2.1 0.00015 23.9 1.9 53 2-64 6-58 (64)
14 d1weva_ g.50.1.2 (A:) PHD fing 54.7 1.7 0.00012 25.9 0.7 28 2-29 16-43 (88)
15 d2dlqa3 g.37.1.1 (A:63-92) GLI 52.4 1.7 0.00012 20.8 0.3 15 19-33 4-18 (30)
16 d1ptqa_ g.49.1.1 (A:) Protein 42.8 3.8 0.00028 21.6 0.9 25 3-27 12-36 (50)
17 d1d4ua2 g.39.1.5 (A:1-36) DNA 40.5 3.6 0.00026 20.7 0.5 23 4-26 7-33 (36)
18 d2jnea1 g.41.18.1 (A:1-71) Hyp 37.4 8.5 0.00062 22.3 1.9 33 1-34 1-33 (71)
19 d2dj8a1 g.85.1.1 (A:8-54) Zinc 37.0 7.8 0.00057 20.3 1.6 21 2-28 8-28 (47)
20 d1f62a_ g.50.1.2 (A:) Williams 35.2 6.8 0.0005 20.5 1.2 24 4-29 2-25 (51)
21 d1mm2a_ g.50.1.2 (A:) Mi2-beta 35.0 8.7 0.00063 21.0 1.6 47 3-64 10-56 (61)
22 d1pfta_ g.41.3.1 (A:) Transcri 33.1 7.7 0.00056 20.7 1.1 25 3-27 6-32 (50)
23 d1fp0a1 g.50.1.2 (A:19-88) Nuc 30.7 11 0.00084 21.0 1.7 46 3-63 8-53 (70)
24 d1nnqa2 g.41.5.1 (A:135-171) R 30.3 7.2 0.00053 19.7 0.6 10 3-12 21-30 (37)
25 d1yuza2 g.41.5.1 (A:167-202) N 29.5 7.9 0.00058 19.4 0.7 10 3-12 21-30 (36)
26 d1jj2y_ g.41.8.1 (Y:) Ribosoma 25.2 12 0.0009 21.7 1.1 26 4-29 29-55 (73)
27 d1vqoz1 g.41.8.1 (Z:10-82) Rib 24.7 12 0.00091 21.7 1.1 26 4-29 29-55 (73)
28 d1tbna_ g.49.1.1 (A:) Protein 24.3 10 0.00075 21.0 0.6 24 4-27 21-44 (66)
29 d2dana1 g.85.1.1 (A:8-54) Zinc 24.2 17 0.0013 18.9 1.6 18 4-27 10-27 (47)
30 d1i25a_ g.3.6.2 (A:) Huwentoxi 24.0 21 0.0015 17.5 1.7 13 47-59 7-19 (37)
31 d1zfoa_ g.39.1.4 (A:) LASP-1 { 23.5 14 0.0011 17.6 1.0 9 1-9 1-9 (30)
32 d2cu8a1 g.39.1.3 (A:8-37) Cyst 23.5 13 0.00097 17.8 0.9 11 1-11 1-11 (30)
33 d1k81a_ g.59.1.1 (A:) Zinc-bin 21.8 14 0.001 18.5 0.8 24 4-27 2-29 (36)
34 d1wepa_ g.50.1.2 (A:) PHD fing 21.7 14 0.00099 21.2 0.8 49 4-63 14-62 (79)
35 d1x6aa2 g.39.1.3 (A:42-75) Lim 21.4 13 0.00097 18.2 0.6 9 20-28 1-9 (34)
36 d2jz6a1 d.325.1.1 (A:6-75) Rib 20.6 20 0.0014 20.4 1.4 12 1-12 1-12 (70)
No 1
>d1a6ya_ g.39.1.2 (A:) Orphan nuclear receptor reverb DNA-binding domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=7e-33 Score=179.74 Aligned_cols=77 Identities=49% Similarity=1.096 Sum_probs=71.0
Q ss_pred cCcccCCCCceeeeccccccccccceeeeeecCCCcccccCCccccccccCcccccccccccceeecccccCcccCC
Q psy16683 4 TCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGSRYGR 80 (139)
Q Consensus 4 ~C~vC~~~a~g~hyGv~sC~~C~~FFrR~~~~~~~~~~C~~~~~C~i~~~~~~~Ck~CRl~KCl~~GM~~~~vq~~R 80 (139)
.|.|||++|+|+||||++|+||++||||++..+..+..|..+++|.+++..+..|++|||+||+++||++++||++|
T Consensus 2 iC~VCg~~a~g~hyGv~sC~aCk~FFRR~~~~~~~~~~~~~~~~c~~~~~~r~~Cr~CR~~KCl~~GM~~~~vq~~R 78 (78)
T d1a6ya_ 2 LCKVCGDVASGFHYGVLACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRINRNRCQQCRFKKCLSVGMSRDAVRFGR 78 (78)
T ss_dssp BCTTTSSBCCEEETTEEECHHHHHHHHHHHSSCCCCCCCSSTTCCCCCTTTTTSCHHHHHHHHTTTTCCSTTCCCCC
T ss_pred CCeeCCCcCCcccCcchhhhhchhhhhhhhccCCceeeeccCCCcccCCCCCccchhhHHHHHHHhCCCHHHhcCCC
Confidence 69999999999999999999999999999986555545777889999999999999999999999999999999987
No 2
>d1dszb_ g.39.1.2 (B:) Retinoid X receptor (RXR-alpha) DNA-binding domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=6e-33 Score=182.25 Aligned_cols=79 Identities=37% Similarity=0.988 Sum_probs=73.2
Q ss_pred CCcCcccCCCCceeeeccccccccccceeeeeecCCCcccccCCccccccccCcccccccccccceeecccccCcccCCC
Q psy16683 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGSRYGRR 81 (139)
Q Consensus 2 ~~~C~vC~~~a~g~hyGv~sC~~C~~FFrR~~~~~~~~~~C~~~~~C~i~~~~~~~Ck~CRl~KCl~~GM~~~~vq~~R~ 81 (139)
+.+|.|||++|+|+||||++|+||++||||++... ..+.|..+++|.++...+..|++|||+|||++||++++||.+||
T Consensus 5 ~~~C~VC~~~a~g~hyGv~sC~aCk~FFRR~v~~~-~~~~c~~~~~C~~~~~~r~~Cr~CR~~KCl~vGM~~~~vq~~Rd 83 (84)
T d1dszb_ 5 KHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKD-LTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQ 83 (84)
T ss_dssp CEECTTTCCEESSEETTEECCHHHHHHHHHHHHHT-CCCCCSSCSCCCCCTTTTTTCHHHHHHHHHHTTCCGGGSCCCCC
T ss_pred CCcCccCCCcCCccCCCHHHHHHhHHHHHHHHhcC-CCeeccCCCCcccCCCCCccCCCCccHHHHHcCCChHHcccccC
Confidence 45799999999999999999999999999999864 45678888999999999999999999999999999999999998
No 3
>d1dsza_ g.39.1.2 (A:) Retinoic acid receptor DNA-binding domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=3.5e-32 Score=175.17 Aligned_cols=75 Identities=45% Similarity=0.998 Sum_probs=69.9
Q ss_pred cCcccCCCCceeeeccccccccccceeeeeecCCCcccccCCccccccccCcccccccccccceeecccccCcccC
Q psy16683 4 TCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGSRYG 79 (139)
Q Consensus 4 ~C~vC~~~a~g~hyGv~sC~~C~~FFrR~~~~~~~~~~C~~~~~C~i~~~~~~~Ck~CRl~KCl~~GM~~~~vq~~ 79 (139)
||.|||++++|+||||.+|+||++||||++... ..+.|..+++|.++...+..|++|||+|||++||++++||.+
T Consensus 1 PC~VCg~~~~g~hyGv~sC~aC~~FFRR~v~~~-~~~~c~~~~~c~~~~~~r~~Cr~CR~~KCl~~GM~~~~vq~d 75 (75)
T d1dsza_ 1 PCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKN-MVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRND 75 (75)
T ss_dssp CCTTTCSCCCSEETTEECCHHHHHHHHHHHHTT-CCCCCSSCSCCCCSTTTGGGCHHHHHHHHHHTTCCGGGSCCC
T ss_pred CCccCCCcCCccCcCHHHhhhhHHHHHHHHhcC-CceecccCCccccCCccccccchhHHHHHHHhCCCHHHccCC
Confidence 799999999999999999999999999999864 456888889999999999999999999999999999999975
No 4
>d2hanb1 g.39.1.2 (B:5-87) Ecdysone receptor DNA-binding domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.96 E-value=2.8e-32 Score=178.69 Aligned_cols=80 Identities=40% Similarity=0.858 Sum_probs=73.9
Q ss_pred CcCcccCCCCceeeeccccccccccceeeeeecCCCcccccCCccccccccCcccccccccccceeecccccCcccCCCC
Q psy16683 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGSRYGRRS 82 (139)
Q Consensus 3 ~~C~vC~~~a~g~hyGv~sC~~C~~FFrR~~~~~~~~~~C~~~~~C~i~~~~~~~Ck~CRl~KCl~~GM~~~~vq~~R~~ 82 (139)
+.|.|||++++|+||||+||+||++||||++..+ ..+.|..+++|.++...+..|++|||+||+++||++++||.+|+.
T Consensus 1 e~C~VCg~~~~g~hyGv~sC~aCk~FFRR~v~~~-~~~~c~~~~~C~~~~~~r~~Cr~CR~~KCl~vGM~~~~vq~~r~~ 79 (83)
T d2hanb1 1 ELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKS-AVYCCKFGRACEMDMYMRRKCQECRLKKCLAVGMRPECVVPENQC 79 (83)
T ss_dssp CBCTTTCSBCCEEETTEEECHHHHHHHHHHHHTT-CCCCCSSCSCCCCSTTGGGTCHHHHHHHHHHTTCCGGGSSCSSHH
T ss_pred CcCccCCCcCCccCcCHHhHhHhHHHHHHHHhcC-CceeecCCCCcccCCcccccCccchHHHHHHcCCCHHHccccchh
Confidence 4799999999999999999999999999999864 456898999999999999999999999999999999999999885
Q ss_pred c
Q psy16683 83 N 83 (139)
Q Consensus 83 ~ 83 (139)
.
T Consensus 80 ~ 80 (83)
T d2hanb1 80 A 80 (83)
T ss_dssp H
T ss_pred c
Confidence 3
No 5
>d1kb2a_ g.39.1.2 (A:) Vitamin D3 receptor, VDR, DNA-binding domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=2.9e-32 Score=180.78 Aligned_cols=80 Identities=44% Similarity=0.929 Sum_probs=73.5
Q ss_pred CcCcccCCCCceeeeccccccccccceeeeeecCCCcccccCCccccccccCcccccccccccceeecccccCcccCCCC
Q psy16683 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGSRYGRRS 82 (139)
Q Consensus 3 ~~C~vC~~~a~g~hyGv~sC~~C~~FFrR~~~~~~~~~~C~~~~~C~i~~~~~~~Ck~CRl~KCl~~GM~~~~vq~~R~~ 82 (139)
..|.|||++|+|+||||++|+||++||||++... ..+.|..+++|.++...+..|++|||+||+++||++++||.+|+.
T Consensus 1 r~C~VCg~~a~g~hyGv~sC~aC~~FFRR~v~~~-~~~~c~~~~~C~i~~~~r~~Cr~CR~~KCl~vGM~~~~v~~~r~~ 79 (89)
T d1kb2a_ 1 RICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRK-ALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEV 79 (89)
T ss_dssp CBCTTTCSBCCSEETTEECCHHHHHHHHHHHHTT-CCCCCSSCSCCCCCTTTTTTCHHHHHHHHHHTTCCGGGSCCHHHH
T ss_pred CCCeeCCCcCCccCCCHHHHHHHHHHHHHHHhcC-CCeecCCCCccCCCCcCCccCchhhHHHHHHcCCCHhhccccchh
Confidence 4799999999999999999999999999999864 445788889999999999999999999999999999999998886
Q ss_pred c
Q psy16683 83 N 83 (139)
Q Consensus 83 ~ 83 (139)
.
T Consensus 80 ~ 80 (89)
T d1kb2a_ 80 Q 80 (89)
T ss_dssp H
T ss_pred c
Confidence 4
No 6
>d2nllb_ g.39.1.2 (B:) Thyroid hormone receptor (TR-beta) DNA-binding domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=6.3e-32 Score=183.69 Aligned_cols=82 Identities=37% Similarity=0.868 Sum_probs=73.6
Q ss_pred CCcCcccCCCCceeeeccccccccccceeeeeecCC-CcccccCCccccccccCcccccccccccceeecccccCcccCC
Q psy16683 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLP-SISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGSRYGR 80 (139)
Q Consensus 2 ~~~C~vC~~~a~g~hyGv~sC~~C~~FFrR~~~~~~-~~~~C~~~~~C~i~~~~~~~Ck~CRl~KCl~~GM~~~~vq~~R 80 (139)
++.|.|||++|+|+||||+||+||++||||++.+.. ..+.|..++.|.++...+..|++|||+||+++||++++||.+|
T Consensus 1 ~~~C~VCg~~a~g~HfGv~sC~aCkaFFRR~v~~~~~~~~~c~~~~~c~~~~~~r~~Cr~CR~~KCl~vGM~~~~v~~~r 80 (103)
T d2nllb_ 1 DELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDS 80 (103)
T ss_dssp CCBCTTTCSBCCSEETTEECCHHHHHHHHHHHHTTCGGGCCCSSCTTCCCSTTTTTSCHHHHHHHHHHTTCCGGGSCCHH
T ss_pred CCcCccCCCcCCcccCchhhhHHHHHHhHHHhhccccceeecccCCCCcCCCCccCCCccccchhHHHhhccHHhhhccc
Confidence 468999999999999999999999999999998633 2345678889999999999999999999999999999999998
Q ss_pred CCc
Q psy16683 81 RSN 83 (139)
Q Consensus 81 ~~~ 83 (139)
+..
T Consensus 81 ~~~ 83 (103)
T d2nllb_ 81 KRL 83 (103)
T ss_dssp HHH
T ss_pred cch
Confidence 864
No 7
>d1lo1a_ g.39.1.2 (A:) Steroid hormone receptor Err2 DNA-binding domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=2.7e-32 Score=181.19 Aligned_cols=80 Identities=44% Similarity=0.899 Sum_probs=74.1
Q ss_pred CcCcccCCCCceeeeccccccccccceeeeeecCCCcccccCCccccccccCcccccccccccceeecccccCcccCCCC
Q psy16683 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGSRYGRRS 82 (139)
Q Consensus 3 ~~C~vC~~~a~g~hyGv~sC~~C~~FFrR~~~~~~~~~~C~~~~~C~i~~~~~~~Ck~CRl~KCl~~GM~~~~vq~~R~~ 82 (139)
.+|.|||++++|+||||++|+||++||||++..+ ..+.|..+++|.++...+..|++|||+|||++||++++||++|+.
T Consensus 5 ~~C~VCg~~~~~~hyG~~sC~aC~~FFRR~v~~~-~~~~c~~~~~C~i~~~~r~~Cr~CR~~KCl~vGM~~~~Vq~~r~~ 83 (90)
T d1lo1a_ 5 RLCLVCGDIASGYHYGVASCEACKAFFKRTIQGN-IEYSCPATNECEITKRRRKSCQACRFMKALKVGMLKEGVRLDRVR 83 (90)
T ss_dssp CEETTTTEECSEESSSSEECHHHHHHHHHHHHTT-CCCCCSSCSCCCCCHHHHHHCHHHHHHHHHHHTCCGGGSCSSCCT
T ss_pred CcCCcCCCcCCceEcCeeechhhHHHHHHHHhcC-CccchhcCCCCccCCCCccccchhhHHHHHHcCCCHHHhcccccc
Confidence 5699999999999999999999999999999864 456898899999999889999999999999999999999999987
Q ss_pred c
Q psy16683 83 N 83 (139)
Q Consensus 83 ~ 83 (139)
.
T Consensus 84 ~ 84 (90)
T d1lo1a_ 84 G 84 (90)
T ss_dssp T
T ss_pred c
Confidence 4
No 8
>d1cita_ g.39.1.2 (A:) Orphan nuclear receptor NGFI-B DNA-binding domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.95 E-value=7.3e-31 Score=174.04 Aligned_cols=80 Identities=40% Similarity=0.833 Sum_probs=72.5
Q ss_pred CcCcccCCCCceeeeccccccccccceeeeeecCCCcccccCCccccccccCcccccccccccceeecccccCcccCCCC
Q psy16683 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSGSRYGRRS 82 (139)
Q Consensus 3 ~~C~vC~~~a~g~hyGv~sC~~C~~FFrR~~~~~~~~~~C~~~~~C~i~~~~~~~Ck~CRl~KCl~~GM~~~~vq~~R~~ 82 (139)
.+|.|||++|+|+||||.+|+||++||||++.... .+.|..+++|.++...+..|++|||+||+++||++++||++++.
T Consensus 1 g~C~VCg~~a~g~hyGv~sC~aCk~FFRR~~~~~~-~~~c~~~~~c~~~~~~r~~Cr~CR~~KCl~~GM~~~~v~~~~~~ 79 (89)
T d1cita_ 1 GRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKSA-KYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLK 79 (89)
T ss_dssp CCCSSSCCCCCEEETTEEECHHHHHHHHHHHHHTC-CCCCSSSSCCCCSTTTTTTCHHHHHHHHHHTTCCGGGSCCGGGT
T ss_pred CCCeECCCcCCccCCCcccchhhHHHHHHHHHcCC-ceeecCCCCccccCCccccCchhhHHHHHHcCCCHHHhcccccc
Confidence 47999999999999999999999999999998644 45787889999999999999999999999999999999988765
Q ss_pred c
Q psy16683 83 N 83 (139)
Q Consensus 83 ~ 83 (139)
.
T Consensus 80 ~ 80 (89)
T d1cita_ 80 G 80 (89)
T ss_dssp T
T ss_pred c
Confidence 3
No 9
>d1r4ia_ g.39.1.2 (A:) Androgen receptor {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.95 E-value=6.8e-31 Score=168.65 Aligned_cols=73 Identities=44% Similarity=0.945 Sum_probs=66.7
Q ss_pred CCcCcccCCCCceeeeccccccccccceeeeeecCCCcccccCCccccccccCcccccccccccceeecccccC
Q psy16683 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKSG 75 (139)
Q Consensus 2 ~~~C~vC~~~a~g~hyGv~sC~~C~~FFrR~~~~~~~~~~C~~~~~C~i~~~~~~~Ck~CRl~KCl~~GM~~~~ 75 (139)
.++|.|||++|+|+||||+||+||++||||++..+. .+.|..+++|.++...+..|++|||+|||++||+.+|
T Consensus 2 ~~~C~VCg~~a~g~hyGv~sC~aCk~FFRR~~~~~~-~~~c~~~~~C~~~~~~r~~C~~CR~~KCl~vGM~~~A 74 (74)
T d1r4ia_ 2 QKTCLICGDEASGAHYGALTCGSCKVFFKRAAEGKQ-KYLCASRNDCTIDKFRRKNCPSCRLRKCYEAGMTLGA 74 (74)
T ss_dssp CCBCSSSCSBEEEEETTEEEEHHHHHHHHHHHTSCC-CCCCSSSSCCCCCTTTTTTCHHHHHHHHHHHTCCSCC
T ss_pred CCcCccCCCcCCccCCCHHhhHHHHHHHHHHHhccc-ceeeecCCCcccCCCCcccchhhhHHHHHHcCCcCCC
Confidence 367999999999999999999999999999988644 4688888999999999999999999999999999875
No 10
>d1lata_ g.39.1.2 (A:) Glucocorticoid receptor DNA-binding domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.95 E-value=1e-30 Score=166.60 Aligned_cols=71 Identities=45% Similarity=0.996 Sum_probs=65.1
Q ss_pred CcCcccCCCCceeeeccccccccccceeeeeecCCCcccccCCccccccccCcccccccccccceeeccccc
Q psy16683 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMSKS 74 (139)
Q Consensus 3 ~~C~vC~~~a~g~hyGv~sC~~C~~FFrR~~~~~~~~~~C~~~~~C~i~~~~~~~Ck~CRl~KCl~~GM~~~ 74 (139)
.+|.|||++|+|+||||+||+||++||||++..+ ..+.|..+++|.++...+..|++|||+|||++||+++
T Consensus 1 k~C~VC~~~a~g~hyGv~sC~aCk~FFRR~v~~~-~~~~c~~~~~C~~~~~~r~~Cr~CR~~KCl~~GM~~e 71 (71)
T d1lata_ 1 RPCLVCSDEASGCHYGVLTCEGCKAFFKRAVEGQ-HNYLCKYEGKCIIDKIRRKNCPACRYRKCLQAGMNLE 71 (71)
T ss_dssp CBCTTTCSBCCEEETTEEECHHHHHHHHHHHHSC-CCCCCSSCSCCCCSTTTTTTCHHHHHHHHHHTTCCCC
T ss_pred CcCeeCCCcCCceEcCHhhHHHHHHHHHHHHhcC-cceeeecCcccccccCccccCCccchhHHhHccCCCC
Confidence 4899999999999999999999999999999864 4457888899999999999999999999999999864
No 11
>d1hcqa_ g.39.1.2 (A:) Estrogen receptor DNA-binding domain {Human and chicken (Homo sapiens) and (Gallus gallus) [TaxId: 9606]}
Probab=99.94 E-value=1.2e-29 Score=162.86 Aligned_cols=70 Identities=47% Similarity=1.064 Sum_probs=65.0
Q ss_pred CCcCcccCCCCceeeeccccccccccceeeeeecCCCcccccCCccccccccCcccccccccccceeeccc
Q psy16683 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLRKCLMVGMS 72 (139)
Q Consensus 2 ~~~C~vC~~~a~g~hyGv~sC~~C~~FFrR~~~~~~~~~~C~~~~~C~i~~~~~~~Ck~CRl~KCl~~GM~ 72 (139)
...|.|||++|+|+||||++|+||++||||++.. ...+.|..+++|.++...+..|++|||+||+++||+
T Consensus 4 ~~~C~VCg~~a~g~hyGv~sC~aC~~FFRR~v~~-~~~~~C~~~~~C~i~~~~r~~Cr~CR~~KCl~vGM~ 73 (74)
T d1hcqa_ 4 TRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQG-HNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMM 73 (74)
T ss_dssp CCBCTTTCSBCCEEETTEEECHHHHHHHHHHHSS-CCCCCCSSSSCCCCSTTTTTTCHHHHHHHHHHHTCC
T ss_pred CCCCccCCCcCCceEcCeeehHHHHHHHHHHHHc-ccccccccCCCCccCCCccccchHhhHHHHHHcCCc
Confidence 4679999999999999999999999999999886 345689999999999999999999999999999996
No 12
>d1dcqa2 g.45.1.1 (A:247-368) Pyk2-associated protein beta ARF-GAP domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=67.85 E-value=0.35 Score=31.33 Aligned_cols=30 Identities=30% Similarity=0.758 Sum_probs=24.1
Q ss_pred CCcCcccCCCCc---eeeeccccccccccceee
Q psy16683 2 NQTCKVCGEPAA---GFHFGAFTCEGCKSFFGR 31 (139)
Q Consensus 2 ~~~C~vC~~~a~---g~hyGv~sC~~C~~FFrR 31 (139)
|..|.-||.+.- ...||++.|..|++..|-
T Consensus 15 N~~CaDC~~~~p~w~s~n~GvfvC~~CsgiHR~ 47 (122)
T d1dcqa2 15 NDVCCDCGAPDPTWLSTNLGILTCIECSGIHRE 47 (122)
T ss_dssp TTBCTTTCCBSCCEEETTTTEEECHHHHHHHHH
T ss_pred CCccCCCCCCCCCeEEecCCEEEchhhhHHHhc
Confidence 667999986543 468999999999998654
No 13
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=61.51 E-value=2.1 Score=23.89 Aligned_cols=53 Identities=25% Similarity=0.576 Sum_probs=31.0
Q ss_pred CCcCcccCCCCceeeeccccccccccceeeeeecCCCcccccCCccccccccCcccccccccc
Q psy16683 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64 (139)
Q Consensus 2 ~~~C~vC~~~a~g~hyGv~sC~~C~~FFrR~~~~~~~~~~C~~~~~C~i~~~~~~~Ck~CRl~ 64 (139)
...|.||++....-++ .+.|..|..+|=.. |-+-..=.+.....+.|..|+-.
T Consensus 6 ~~~C~~C~~~~~~~~~-~I~Cd~C~~w~H~~---------C~~~~~~~~~~~~~w~C~~C~~~ 58 (64)
T d1we9a_ 6 SGQCGACGESYAADEF-WICCDLCEMWFHGK---------CVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp CCCCSSSCCCCCSSSC-EEECSSSCCEEETT---------TTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCcCcCcCCCCCCCCC-EEEcCCCCccCCcc---------cCCcChHHCCCCCeEECcCCcCc
Confidence 4579999986544433 35899999877443 32211111222235788888743
No 14
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=54.72 E-value=1.7 Score=25.87 Aligned_cols=28 Identities=18% Similarity=0.555 Sum_probs=19.1
Q ss_pred CCcCcccCCCCceeeeccccccccccce
Q psy16683 2 NQTCKVCGEPAAGFHFGAFTCEGCKSFF 29 (139)
Q Consensus 2 ~~~C~vC~~~a~g~hyGv~sC~~C~~FF 29 (139)
+..|.||+.....-.--++.|.+|...|
T Consensus 16 ~~~C~iC~~~~~~~~~~~v~Cd~C~~~~ 43 (88)
T d1weva_ 16 GLACVVCRQMTVASGNQLVECQECHNLY 43 (88)
T ss_dssp CCSCSSSCCCCCCTTCCEEECSSSCCEE
T ss_pred cCCccCCCCccCCCCCeEEEcCCCCCcc
Confidence 3469999865544333467899998655
No 15
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=52.41 E-value=1.7 Score=20.77 Aligned_cols=15 Identities=40% Similarity=0.873 Sum_probs=12.8
Q ss_pred cccccccccceeeee
Q psy16683 19 AFTCEGCKSFFGRSY 33 (139)
Q Consensus 19 v~sC~~C~~FFrR~~ 33 (139)
|++|.-|..-|||-+
T Consensus 4 vftcs~cqe~f~rrm 18 (30)
T d2dlqa3 4 VFTCSVCQETFRRRM 18 (30)
T ss_dssp CEECSSSCCEESSHH
T ss_pred eEEeHHHHHHHHHHH
Confidence 679999999998864
No 16
>d1ptqa_ g.49.1.1 (A:) Protein kinase C-delta (PKCdelta) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=42.79 E-value=3.8 Score=21.61 Aligned_cols=25 Identities=28% Similarity=0.642 Sum_probs=16.9
Q ss_pred CcCcccCCCCceeeecccccccccc
Q psy16683 3 QTCKVCGEPAAGFHFGAFTCEGCKS 27 (139)
Q Consensus 3 ~~C~vC~~~a~g~hyGv~sC~~C~~ 27 (139)
..|.+|+..-.|.-..++.|+.|+.
T Consensus 12 ~~C~~C~~~i~g~~~qg~~C~~C~~ 36 (50)
T d1ptqa_ 12 TFCDHCGSLLWGLVKQGLKCEDCGM 36 (50)
T ss_dssp CBCTTTCCBCCSSSSCEEEETTTCC
T ss_pred cCCcccCCcccCcccCcEECCCCCC
Confidence 4577787766665556677777774
No 17
>d1d4ua2 g.39.1.5 (A:1-36) DNA repair factor XPA DNA- and RPA-binding domain, N-terminal subdomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.54 E-value=3.6 Score=20.73 Aligned_cols=23 Identities=35% Similarity=0.856 Sum_probs=16.9
Q ss_pred cCcccCCC-Cc---eeeeccccccccc
Q psy16683 4 TCKVCGEP-AA---GFHFGAFTCEGCK 26 (139)
Q Consensus 4 ~C~vC~~~-a~---g~hyGv~sC~~C~ 26 (139)
.|.-||++ +. ..||+-.+|..|+
T Consensus 7 ~C~eCg~~F~DSYL~~~Fd~~vCD~CR 33 (36)
T d1d4ua2 7 ICEECGKEFMDSYLMDHFDLPTCDDCR 33 (36)
T ss_dssp ECTTTCCEESCSSSTTTTSCCCCTTTC
T ss_pred HHHHhCcHHHHHHHHHcCCchhccccc
Confidence 48888876 22 3688888888885
No 18
>d2jnea1 g.41.18.1 (A:1-71) Hypothetical protein YfgJ {Escherichia coli [TaxId: 562]}
Probab=37.38 E-value=8.5 Score=22.29 Aligned_cols=33 Identities=21% Similarity=0.425 Sum_probs=24.0
Q ss_pred CCCcCcccCCCCceeeeccccccccccceeeeee
Q psy16683 1 MNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYN 34 (139)
Q Consensus 1 ~~~~C~vC~~~a~g~hyGv~sC~~C~~FFrR~~~ 34 (139)
|...|+.|... -....|...|..|..-|+.-..
T Consensus 1 m~~~CP~C~~e-L~~~~~~~~C~~C~~~~~~~a~ 33 (71)
T d2jnea1 1 MELHCPQCQHV-LDQDNGHARCRSCGEFIEMKAL 33 (71)
T ss_dssp CCCBCSSSCSB-EEEETTEEEETTTCCEEEEEEE
T ss_pred CCCcCCCccCc-ccccCCCEehhhhhhhheeEEe
Confidence 56789999876 3334577789999998876543
No 19
>d2dj8a1 g.85.1.1 (A:8-54) Zinc finger MYND domain-containing protein 2, MTG8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.98 E-value=7.8 Score=20.33 Aligned_cols=21 Identities=38% Similarity=0.947 Sum_probs=14.5
Q ss_pred CCcCcccCCCCceeeeccccccccccc
Q psy16683 2 NQTCKVCGEPAAGFHFGAFTCEGCKSF 28 (139)
Q Consensus 2 ~~~C~vC~~~a~g~hyGv~sC~~C~~F 28 (139)
...|.+||.++ ...|.+|+..
T Consensus 8 ~~~C~~C~~~~------~~~C~~C~~~ 28 (47)
T d2dj8a1 8 SESCWNCGRKA------SETCSGCNTA 28 (47)
T ss_dssp SCCCSSSCSCC------CEECTTTSCC
T ss_pred CCcCCCCCccc------cccCCCCCCe
Confidence 35689999765 3468888753
No 20
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.20 E-value=6.8 Score=20.49 Aligned_cols=24 Identities=29% Similarity=0.736 Sum_probs=17.8
Q ss_pred cCcccCCCCceeeeccccccccccce
Q psy16683 4 TCKVCGEPAAGFHFGAFTCEGCKSFF 29 (139)
Q Consensus 4 ~C~vC~~~a~g~hyGv~sC~~C~~FF 29 (139)
.|.||+....+. -.+.|.+|...|
T Consensus 2 ~C~vC~~~~~~~--~~i~Cd~C~~~~ 25 (51)
T d1f62a_ 2 RCKVCRKKGEDD--KLILCDECNKAF 25 (51)
T ss_dssp CCTTTCCSSCCS--CCEECTTTCCEE
T ss_pred CCcCcCCCCCCC--CEEEcCCCCCCC
Confidence 588998776543 357799999776
No 21
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.97 E-value=8.7 Score=20.96 Aligned_cols=47 Identities=23% Similarity=0.540 Sum_probs=27.7
Q ss_pred CcCcccCCCCceeeeccccccccccceeeeeecCCCcccccCCccccccccCcccccccccc
Q psy16683 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRLR 64 (139)
Q Consensus 3 ~~C~vC~~~a~g~hyGv~sC~~C~~FFrR~~~~~~~~~~C~~~~~C~i~~~~~~~Ck~CRl~ 64 (139)
..|.||++... ++.|..|...| ...|-....-.+ ....+.|..|+-.
T Consensus 10 ~~C~~C~~~g~-----lv~Cd~C~~~~---------H~~C~~~~~~~~-~~~~W~C~~C~~~ 56 (61)
T d1mm2a_ 10 EFCRVCKDGGE-----LLCCDTCPSSY---------HIHCLNPPLPEI-PNGEWLCPRCTCP 56 (61)
T ss_dssp SSCTTTCCCSS-----CBCCSSSCCCB---------CSSSSSSCCSSC-CSSCCCCTTTTTT
T ss_pred CCCcCCCCCCe-----EEEeCCCCccC---------chhhcCCCcCcC-CCCcEECCCCcCc
Confidence 35999987543 78999998654 224533221111 1235678888644
No 22
>d1pfta_ g.41.3.1 (A:) Transcription initiation factor TFIIB, N-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=33.11 E-value=7.7 Score=20.73 Aligned_cols=25 Identities=20% Similarity=0.616 Sum_probs=17.2
Q ss_pred CcCcccCCCCceeee--cccccccccc
Q psy16683 3 QTCKVCGEPAAGFHF--GAFTCEGCKS 27 (139)
Q Consensus 3 ~~C~vC~~~a~g~hy--Gv~sC~~C~~ 27 (139)
..|..||...--..+ |-..|..|..
T Consensus 6 ~~Cp~Cgs~~iv~D~~~Ge~vC~~CG~ 32 (50)
T d1pfta_ 6 KVCPACESAELIYDPERGEIVCAKCGY 32 (50)
T ss_dssp CSCTTTSCCCEEEETTTTEEEESSSCC
T ss_pred ccCcCCCCCcEEEECCCCeEecccCCc
Confidence 468888865544433 7788888875
No 23
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.73 E-value=11 Score=21.05 Aligned_cols=46 Identities=24% Similarity=0.582 Sum_probs=26.3
Q ss_pred CcCcccCCCCceeeeccccccccccceeeeeecCCCcccccCCccccccccCccccccccc
Q psy16683 3 QTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRL 63 (139)
Q Consensus 3 ~~C~vC~~~a~g~hyGv~sC~~C~~FFrR~~~~~~~~~~C~~~~~C~i~~~~~~~Ck~CRl 63 (139)
..|.||++... .+.|.+|...|=- .|-.... .....+.+.|..|+.
T Consensus 8 ~~C~~C~~~~~-----ll~Cd~C~~~~H~---------~C~~p~l-~~~p~~~W~C~~C~~ 53 (70)
T d1fp0a1 8 TICRVCQKPGD-----LVMCNQCEFCFHL---------DCHLPAL-QDVPGEEWSCSLCHV 53 (70)
T ss_dssp SCCSSSCSSSC-----CEECTTSSCEECT---------TSSSTTC-CCCCSSSCCCCSCCC
T ss_pred CCCCCCCCcCE-----EEECCCCChhhcc---------ccCCCCc-CcCCCCCEECcCCcC
Confidence 45778876543 7889999966522 3433111 111234577888853
No 24
>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=30.34 E-value=7.2 Score=19.67 Aligned_cols=10 Identities=50% Similarity=1.311 Sum_probs=4.9
Q ss_pred CcCcccCCCC
Q psy16683 3 QTCKVCGEPA 12 (139)
Q Consensus 3 ~~C~vC~~~a 12 (139)
..|.|||.++
T Consensus 21 ~~CPvCg~~~ 30 (37)
T d1nnqa2 21 EYCPVCGAPK 30 (37)
T ss_dssp SBCTTTCCBG
T ss_pred CcCCCCCCcH
Confidence 3455555443
No 25
>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
Probab=29.46 E-value=7.9 Score=19.42 Aligned_cols=10 Identities=30% Similarity=0.989 Sum_probs=5.3
Q ss_pred CcCcccCCCC
Q psy16683 3 QTCKVCGEPA 12 (139)
Q Consensus 3 ~~C~vC~~~a 12 (139)
..|.|||.++
T Consensus 21 e~CPvCg~~~ 30 (36)
T d1yuza2 21 EKCPICFRPK 30 (36)
T ss_dssp SBCTTTCCBG
T ss_pred CcCCCCCCcH
Confidence 3466666543
No 26
>d1jj2y_ g.41.8.1 (Y:) Ribosomal protein L37ae {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=25.17 E-value=12 Score=21.68 Aligned_cols=26 Identities=27% Similarity=0.562 Sum_probs=18.5
Q ss_pred cCcccCCCCc-eeeeccccccccccce
Q psy16683 4 TCKVCGEPAA-GFHFGAFTCEGCKSFF 29 (139)
Q Consensus 4 ~C~vC~~~a~-g~hyGv~sC~~C~~FF 29 (139)
.|..||..+- -.-.|++.|..|..-|
T Consensus 29 ~Cp~Cgk~~vkR~a~GIW~C~kC~~~~ 55 (73)
T d1jj2y_ 29 KCPVCGFKKLKRAGTGIWMCGHCGYKI 55 (73)
T ss_dssp CCSSSCCSCEEEEETTEEEETTTCCEE
T ss_pred cCCCCCCCceEEEEEEEEECCCCCCEE
Confidence 5888886543 4677888888887543
No 27
>d1vqoz1 g.41.8.1 (Z:10-82) Ribosomal protein L37ae {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=24.67 E-value=12 Score=21.67 Aligned_cols=26 Identities=31% Similarity=0.686 Sum_probs=18.5
Q ss_pred cCcccCCCCc-eeeeccccccccccce
Q psy16683 4 TCKVCGEPAA-GFHFGAFTCEGCKSFF 29 (139)
Q Consensus 4 ~C~vC~~~a~-g~hyGv~sC~~C~~FF 29 (139)
.|..||..+- -.--|++.|..|..-|
T Consensus 29 ~Cp~Cgk~~vkR~a~GIW~C~kC~~~~ 55 (73)
T d1vqoz1 29 ACPNCGEDRVDRQGTGIWQCSYCDYKF 55 (73)
T ss_dssp CCSSSSCSCEEEEETTEEEETTTCCEE
T ss_pred cCCCCCCceeEEEEEEEEECCCCCCEE
Confidence 5888887654 4677888888887543
No 28
>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus) [TaxId: 10117]}
Probab=24.34 E-value=10 Score=20.96 Aligned_cols=24 Identities=25% Similarity=0.682 Sum_probs=13.9
Q ss_pred cCcccCCCCceeeecccccccccc
Q psy16683 4 TCKVCGEPAAGFHFGAFTCEGCKS 27 (139)
Q Consensus 4 ~C~vC~~~a~g~hyGv~sC~~C~~ 27 (139)
.|.+|+..-.|.-..++-|..|..
T Consensus 21 ~C~~C~~~i~g~~~~g~~C~~C~~ 44 (66)
T d1tbna_ 21 FCDHCGSLLYGLVHQGMKCSCCEM 44 (66)
T ss_dssp BCSSSCCBCCTTSSSCEEETTTCC
T ss_pred CCcCCCCcccCcccCccccCcccC
Confidence 466676655554444566666664
No 29
>d2dana1 g.85.1.1 (A:8-54) Zinc finger MYND domain-containing protein 10, ZMYND10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.17 E-value=17 Score=18.89 Aligned_cols=18 Identities=28% Similarity=0.848 Sum_probs=13.0
Q ss_pred cCcccCCCCceeeecccccccccc
Q psy16683 4 TCKVCGEPAAGFHFGAFTCEGCKS 27 (139)
Q Consensus 4 ~C~vC~~~a~g~hyGv~sC~~C~~ 27 (139)
.|..||.++. ..|.+|+.
T Consensus 10 ~C~~Cg~~~~------~~Cs~C~~ 27 (47)
T d2dana1 10 RCAYCSAEAS------KRCSRCQN 27 (47)
T ss_dssp CCSSSCCCCC------EECTTTSC
T ss_pred cCcCCCChhh------ccCCCCCC
Confidence 4889987653 46888874
No 30
>d1i25a_ g.3.6.2 (A:) Huwentoxin-II {Chinese bird spider (Selenocosmia huwena) [TaxId: 29017]}
Probab=24.04 E-value=21 Score=17.47 Aligned_cols=13 Identities=38% Similarity=0.861 Sum_probs=5.8
Q ss_pred cccccccCccccc
Q psy16683 47 ECIINKKNRTSCK 59 (139)
Q Consensus 47 ~C~i~~~~~~~Ck 59 (139)
.|.|.+++...|+
T Consensus 7 scei~k~g~~pck 19 (37)
T d1i25a_ 7 SCEIEKEGDKPCK 19 (37)
T ss_dssp CSSSSBCSSSBCB
T ss_pred EEEecccCCCCCc
Confidence 3455544443333
No 31
>d1zfoa_ g.39.1.4 (A:) LASP-1 {Pig (Sus scrofa) [TaxId: 9823]}
Probab=23.55 E-value=14 Score=17.55 Aligned_cols=9 Identities=56% Similarity=1.317 Sum_probs=5.8
Q ss_pred CCCcCcccC
Q psy16683 1 MNQTCKVCG 9 (139)
Q Consensus 1 ~~~~C~vC~ 9 (139)
||+.|.-|+
T Consensus 1 Mn~~CaRC~ 9 (30)
T d1zfoa_ 1 MNPNCARCG 9 (30)
T ss_dssp CCCBCSSSC
T ss_pred CCCcccccC
Confidence 566666665
No 32
>d2cu8a1 g.39.1.3 (A:8-37) Cysteine-rich (intestinal) protein, CRP, CRIP {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.54 E-value=13 Score=17.80 Aligned_cols=11 Identities=27% Similarity=0.800 Sum_probs=7.6
Q ss_pred CCCcCcccCCC
Q psy16683 1 MNQTCKVCGEP 11 (139)
Q Consensus 1 ~~~~C~vC~~~ 11 (139)
|+..|..|+.+
T Consensus 1 M~~~CprC~K~ 11 (30)
T d2cu8a1 1 MASKCPKCDKT 11 (30)
T ss_dssp CCCBCTTTCCB
T ss_pred CCCcCCCCCCc
Confidence 66777777753
No 33
>d1k81a_ g.59.1.1 (A:) Zinc-binding domain of translation initiation factor 2 beta {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=21.84 E-value=14 Score=18.45 Aligned_cols=24 Identities=25% Similarity=0.754 Sum_probs=12.6
Q ss_pred cCcccCCCCce----eeecccccccccc
Q psy16683 4 TCKVCGEPAAG----FHFGAFTCEGCKS 27 (139)
Q Consensus 4 ~C~vC~~~a~g----~hyGv~sC~~C~~ 27 (139)
.|..|+.+... ...-.+-|+||.|
T Consensus 2 ~C~~C~spDT~l~ke~R~~~l~C~aCGa 29 (36)
T d1k81a_ 2 ICRECGKPDTKIIKEGRVHLLKCMACGA 29 (36)
T ss_dssp CCSSSCSCEEEEEEETTEEEEEEETTTE
T ss_pred CCCCCCCCCCEEEEcCCEEEEEeccCCC
Confidence 46667665322 1122346777776
No 34
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.72 E-value=14 Score=21.21 Aligned_cols=49 Identities=22% Similarity=0.496 Sum_probs=26.6
Q ss_pred cCcccCCCCceeeeccccccccccceeeeeecCCCcccccCCccccccccCccccccccc
Q psy16683 4 TCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLPSISECKNNNECIINKKNRTSCKSCRL 63 (139)
Q Consensus 4 ~C~vC~~~a~g~hyGv~sC~~C~~FFrR~~~~~~~~~~C~~~~~C~i~~~~~~~Ck~CRl 63 (139)
-| ||+++....- -.+.|+.|..+|=- .|-+-..=.......+.|..|+-
T Consensus 14 ~C-iC~~~~~~~~-~mI~Cd~C~~W~H~---------~C~g~~~~~~~~~~~~~C~~C~~ 62 (79)
T d1wepa_ 14 YC-LCRQPYNVNH-FMIECGLCQDWFHG---------SCVGIEEENAVDIDIYHCPDCEA 62 (79)
T ss_dssp CS-TTSCSCCSSS-CEEEBTTTCCEEEH---------HHHTCCHHHHTTCSBBCCTTTTT
T ss_pred Ee-ECCCccCCCC-cEEECCCCCCcEec---------cccCcchhcCCCCCEEECccCcC
Confidence 46 8987643221 14689999977632 34321111112223578988864
No 35
>d1x6aa2 g.39.1.3 (A:42-75) Lim domain kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.37 E-value=13 Score=18.22 Aligned_cols=9 Identities=44% Similarity=1.191 Sum_probs=7.2
Q ss_pred ccccccccc
Q psy16683 20 FTCEGCKSF 28 (139)
Q Consensus 20 ~sC~~C~~F 28 (139)
++|.+|++|
T Consensus 1 F~C~~C~~f 9 (34)
T d1x6aa2 1 FACMSCKVI 9 (34)
T ss_dssp CBCTTTCCB
T ss_pred CcccccccE
Confidence 378889887
No 36
>d2jz6a1 d.325.1.1 (A:6-75) Ribosomal protein L28 (L28p) {Thermotoga maritima [TaxId: 2336]}
Probab=20.55 E-value=20 Score=20.43 Aligned_cols=12 Identities=42% Similarity=1.146 Sum_probs=9.8
Q ss_pred CCCcCcccCCCC
Q psy16683 1 MNQTCKVCGEPA 12 (139)
Q Consensus 1 ~~~~C~vC~~~a 12 (139)
|...|.|||...
T Consensus 1 Mar~C~itGK~~ 12 (70)
T d2jz6a1 1 MAKRCEVCGKAP 12 (70)
T ss_dssp CCCCCTTTCCCC
T ss_pred CCcEeeecCCcc
Confidence 778899999754
Done!