RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy16691
         (94 letters)



>d1nt0a2 b.23.1.1 (A:165-278) Mannose-binding protein associated
          serine protease 2, MASP2 {Rat (Rattus norvegicus)
          [TaxId: 10116]}
          Length = 114

 Score = 47.6 bits (112), Expect = 4e-09
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)

Query: 15 LTGTEGFITSPAFPSNYANNLDYWVTIRGPEETRIVLAF---LRLDLEPQSECLYDYVEM 71
           TG  GF++SP +P  Y         IR  E   I L F     +++ P+++C YD +++
Sbjct: 6  FTGRSGFLSSPEYPQPYPKLSSCAYNIRLEEGFSITLDFVESFDVEMHPEAQCPYDSLKI 65

Query: 72 YH 73
            
Sbjct: 66 QT 67


>d1nzia1 b.23.1.1 (A:1-117) Complement C1S component {Human (Homo
          sapiens) [TaxId: 9606]}
          Length = 117

 Score = 44.5 bits (104), Expect = 6e-08
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 20 GFITSPAFPSNYANNLDYWVTIRGPEETRIVLAFLRLDLEPQSECLYDYVEMYHAASVTP 79
          G I SP +P  Y + ++    I  PE   I L F  LD+E    C YD V++    +   
Sbjct: 6  GEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGDTEEG 65

Query: 80 P--TRLCGNHHISALTQ 94
              +   N+  S + +
Sbjct: 66 RLCGQRSSNNPHSPIVE 82


>d2qqma3 b.23.1.1 (A:156-263) Mannose-binding protein associated
          serine protease 2, MASP2 {Human (Homo sapiens) [TaxId:
          9606]}
          Length = 108

 Score = 42.2 bits (98), Expect = 5e-07
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 6/60 (10%)

Query: 20 GFITSPAFPSNYANNLDYWVTIRGPEETRIVLAFLRLDLEPQS------ECLYDYVEMYH 73
          G I SP FP  Y N+L+    +  P+ + I+L F   DLEP S       C YD +E++ 
Sbjct: 1  GVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWD 60


>d1szba1 b.23.1.1 (A:3-123) Mannose-binding protein associated
          serine protease 2, MASP2 {Human (Homo sapiens) [TaxId:
          9606]}
          Length = 121

 Score = 41.4 bits (96), Expect = 1e-06
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 20 GFITSPAFPSNYANNLDYWVTIRGPEETRIVLAFLRLDLEPQSECLYDYVEMYHAASVTP 79
          G + SP FP  YAN+ +   T+  P   R+ L F   DLE    C YD+V++   A V  
Sbjct: 11 GRLASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELSHLCEYDFVKLSSGAKVLA 70

Query: 80 PT--RLCGN 86
              +   +
Sbjct: 71 TLCGQESTD 79


>d1yf9a1 d.20.1.1 (A:13-170) Ubiquitin conjugating enzyme, UBC
          {Leishmania major [TaxId: 5664]}
          Length = 158

 Score = 28.5 bits (63), Expect = 0.088
 Identities = 11/60 (18%), Positives = 19/60 (31%), Gaps = 6/60 (10%)

Query: 26 AFPSNYANNLDYWVTIRGPEETRIVLAFLRLDLEPQSECLYDYVEMYHAASVTPPTRLCG 85
           +PS+     ++WV  +GPE T        L +    +   DY     +           
Sbjct: 19 VYPSD--TVAEFWVEFKGPEGTPYEDGTWMLHV----QLPSDYPFKSPSIGFCNRILHPN 72


>d1sfpa_ b.23.1.1 (A:) Acidic seminal fluid protein (ASFP) {Cow
          (Bos taurus) [TaxId: 9913]}
          Length = 111

 Score = 28.0 bits (61), Expect = 0.10
 Identities = 12/79 (15%), Positives = 23/79 (29%), Gaps = 9/79 (11%)

Query: 15 LTGTEGFITSPAFPSNYANNLDYWVTIRGPEETRIVLAFLRLDLEPQSECLYDYVEMYHA 74
          L    G I +      Y    +   TI+ P E  + ++   L       C  + +E+   
Sbjct: 11 LKEESGVIATY-----YGPKTNCVWTIQMPPEYHVRVSIQYLQ----LNCNKESLEIIDG 61

Query: 75 ASVTPPTRLCGNHHISALT 93
             +P         +    
Sbjct: 62 LPGSPVLGKICEGSLMDYR 80


>d1sppb_ b.23.1.1 (B:) Major seminal plasma glycoprotein PSP-II
          {Pig (Sus scrofa) [TaxId: 9823]}
          Length = 112

 Score = 27.3 bits (59), Expect = 0.21
 Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 10/75 (13%)

Query: 15 LTGTEGFITSPAFPSNYANNLDYWVTIRGPEETRIVLAFLRLDLEPQSECLYDYVEMY-H 73
          +  T G I++     +   NL  W TI    + ++ +A   L       C  +YVE++  
Sbjct: 13 IKDTSGSISNT----DRQKNLCTW-TILMKPDQKVRMAIPYL----NLACGKEYVEVFDG 63

Query: 74 AASVTPPTRLCGNHH 88
            S     +LC    
Sbjct: 64 LLSGPSYGKLCAGAA 78


>d1sppa_ b.23.1.1 (A:) Major seminal plasma glycoprotein PSP-I
          {Pig (Sus scrofa) [TaxId: 9823]}
          Length = 109

 Score = 25.4 bits (54), Expect = 0.88
 Identities = 5/17 (29%), Positives = 6/17 (35%)

Query: 15 LTGTEGFITSPAFPSNY 31
          LT   G I +   P   
Sbjct: 10 LTDDYGTIFTYKGPKTE 26


>d2z5da1 d.20.1.1 (A:23-174) Ubiquitin conjugating enzyme, UBC
          {Human (Homo sapiens), E2 H [TaxId: 9606]}
          Length = 152

 Score = 23.9 bits (51), Expect = 3.6
 Identities = 5/29 (17%), Positives = 12/29 (41%), Gaps = 1/29 (3%)

Query: 32 ANNLDYW-VTIRGPEETRIVLAFLRLDLE 59
             L+ + V   GP+ T       ++ ++
Sbjct: 25 LGGLNEFVVKFYGPQGTPYEGGVWKVRVD 53


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.132    0.401 

Gapped
Lambda     K      H
   0.267   0.0521    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 345,036
Number of extensions: 13328
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 10
Length of query: 94
Length of database: 2,407,596
Length adjustment: 57
Effective length of query: 37
Effective length of database: 1,624,986
Effective search space: 60124482
Effective search space used: 60124482
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.4 bits)