BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy16692
         (1149 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
            terrestris]
          Length = 1104

 Score =  248 bits (632), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 140/300 (46%), Positives = 180/300 (60%), Gaps = 48/300 (16%)

Query: 797  ILDYREPDLEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFN 856
            IL+ R   LE V     +NW+L     YFERL+ + K  +++ ++Q     + N  I ++
Sbjct: 589  ILESRPEVLEIV-----KNWWLEAPSHYFERLVRVHKSVVLHYVKQ----SNPNKGILWD 639

Query: 857  RKLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVC 916
              L   L  L  L+ LNNE                       G KV Y+ F++P+L  + 
Sbjct: 640  ATLQDILDSLGLLHKLNNED--------------------SEGNKVPYSTFHLPELVELI 679

Query: 917  DIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFY---- 972
            DIR DY +WIS R + S R   C+YPF+ DA AK  LLE DQ IQM+ AMN+        
Sbjct: 680  DIRADYIKWISERESFSHRKVFCHYPFLLDANAKIILLETDQAIQMQSAMNEAATRAVMN 739

Query: 973  -LFLQTF--NPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQ 1029
             +FL  F  +P   NQ++ + VSR+NIV DT+RELAQY ++D KKPL+V           
Sbjct: 740  QIFLDPFSVDPRHHNQFVILNVSRENIVADTLRELAQYNSSDLKKPLRV----------- 788

Query: 1030 VKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             KF GEEAEDAGGVR+EF MLLL+EILDPKYGMFK+YEETR IWFSED+FED+NMYFLIG
Sbjct: 789  -KFHGEEAEDAGGVRKEFFMLLLREILDPKYGMFKQYEETRVIWFSEDSFEDENMYFLIG 847



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/391 (34%), Positives = 214/391 (54%), Gaps = 42/391 (10%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHC 61
           G +H++A+N+ G++F+WG ++ GQLGL S +    S P+ VK L +  +VQ AC      
Sbjct: 140 GAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECS-PRMVKTLGTSIIVQIAC------ 192

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVV-QA 120
                  G+ H+LAL + GE+++WG ++ GQLGL   D + +  PK +  LA V +   A
Sbjct: 193 -------GMKHALALTNNGELYSWGSNSEGQLGL-GVDIRCEMKPKLINTLAGVPIAFIA 244

Query: 121 CAGYSHCLVLTSSGVV----TCTHKENGCGSDPSQGV--QSNLVQDSHTTITS------- 167
           C GY H + ++ SG +      T  + G     ++ +  Q   ++++     +       
Sbjct: 245 CGGY-HSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSV 303

Query: 168 -LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            L   G ++T G   YGQ+G + SN     P++V  L+   +  I+CG  H+  L  S  
Sbjct: 304 FLTVDGGVFTCGAGMYGQLG-HGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQG 362

Query: 227 RLYAFGIGSAVQL--DSPKSVHKTPQLIHGPWIA-SPVAMTAGEDSLVSHSGGLVVKKIY 283
           R+YA+G+G A QL  +S +S   TPQ++ GPW+A +  +M   +    S + G VVK I+
Sbjct: 363 RVYAWGLGGAGQLGNNSTRST-TTPQVVRGPWVAPNGSSMMDFDKQFSSCTVGYVVKHIF 421

Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLL 343
           +GGDH   TV   +D +  DD R L  ++QIL +  E+L  C+R    +  + ++D +L+
Sbjct: 422 TGGDHCFATVVTQNDNIKPDDCRTLESSSQILTITEEQLMTCQR----VPPNSSVDHELM 477

Query: 344 LYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
            YLETVF S  C+NGSFL  +ND  + C+SK
Sbjct: 478 TYLETVFKSLSCVNGSFL-FKNDARYGCSSK 507



 Score =  142 bits (359), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 65/102 (63%), Positives = 80/102 (78%), Gaps = 4/102 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+      +YEETR IWFSED+FED+NM FLIG LCGL IYN+ II++PFPLALYKK
Sbjct: 816 PKYGM----FKQYEETRVIWFSEDSFEDENMYFLIGILCGLVIYNFIIIDLPFPLALYKK 871

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
           +L EP+ L D+KD+SP  AKS+Q+ILDY E D E+VFG+ F 
Sbjct: 872 LLHEPVALNDIKDMSPVFAKSMQNILDYEEADFEEVFGLHFE 913



 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 56/234 (23%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +++ +   G++++ G + +GQLG E   K+ Q I                 G    +   
Sbjct: 93  YTVVITHDGKIYSCGNNDYGQLGHEQGRKRLQLI----------------LGLDAFVFKK 136

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           +  G +H++A+N+ G++F+WG ++ GQLGL S +    S P+ VK L +  +VQ   G  
Sbjct: 137 AACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECS-PRMVKTLGTSIIVQIACGMK 195

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           H L LT++G                                      ELY+WG+N  GQ+
Sbjct: 196 HALALTNNG--------------------------------------ELYSWGSNSEGQL 217

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           G+        KP+ + +L  +PIA IACG  HS  +SKS   ++ +G  +  QL
Sbjct: 218 GLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKS-GAIFGWGKNTFGQL 270



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 8/116 (6%)

Query: 417 YLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSN 476
           YLETVF S  C+NGSFL  +ND  + C+SK+ GVD+      +  I  ++  +++ ++  
Sbjct: 479 YLETVFKSLSCVNGSFL-FKNDARYGCSSKHHGVDLDQATKLFGIIRELDNSTIQEVI-- 535

Query: 477 LAILASHAHLVKSLWNTPPD---AEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
                    L+ S  N P      E LR++L LPLYH F+NP    +LH PF  A+
Sbjct: 536 --FTCISESLIPSFVNLPSKIISPEFLRIYLILPLYHGFVNPLNCNLLHKPFCKAI 589


>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
            mellifera]
          Length = 1081

 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 128/283 (45%), Positives = 174/283 (61%), Gaps = 41/283 (14%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
            T  +W+L     YFERL+ + K  +++ ++Q      +N  ++++  L   L  L  LN 
Sbjct: 578  TVTSWWLKTPPHYFERLVRVHKSVVLHYVKQ----FKSNKAVSWDVTLQVILDSLHLLNK 633

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            LNNE                       G KV Y+ F++P+L  + DIR DY +WIS + +
Sbjct: 634  LNNEG--------------------DEGNKVPYSTFHLPELIELIDIRTDYIKWISEKES 673

Query: 932  GSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQT--FNPHTL---NQY 986
             S++   CNYPF+ DA AK  LLE DQ IQM+ AMN+      +    F+P ++   NQ+
Sbjct: 674  FSSQKVFCNYPFLLDANAKIILLETDQAIQMQSAMNEAATLAVMNQMFFDPFSIPHHNQF 733

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            + + VSR+NIV DT+REL+QY ++D KKPL+V            KF GEEAEDAGGV++E
Sbjct: 734  VILNVSRENIVADTLRELSQYNSSDLKKPLRV------------KFHGEEAEDAGGVKKE 781

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            F MLLL+EILDPKYGMFK+YEETR IWFSED+ ED+NMYFLIG
Sbjct: 782  FFMLLLREILDPKYGMFKQYEETRIIWFSEDSLEDENMYFLIG 824



 Score =  209 bits (533), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 141/393 (35%), Positives = 212/393 (53%), Gaps = 46/393 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHC 61
           G +H+LA+N+ G++F+WG +T GQLGL S +    S P+ VK L +  VVQ AC      
Sbjct: 119 GAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESS-PRMVKTLGTSVVVQIAC------ 171

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVV-QA 120
                  G+ H+ AL + GE+++WG ++ GQLGL   D K +  PK +     + +   A
Sbjct: 172 -------GMKHAFALTNNGELYSWGSNSEGQLGL-GTDTKYEIKPKFISAFIGIPIAFIA 223

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGS-------DPSQGVQSNLVQDSHTTITS------ 167
           C GY H + ++ SG V    K N  G        D +   Q   +Q++     +      
Sbjct: 224 CGGY-HSIAISKSGAVFGWGK-NTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFS 281

Query: 168 --LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             L   G ++T G   YGQ+G + SN+    P++V  L+   +  I+CG  H+  L  S 
Sbjct: 282 VFLTVDGGVFTCGAGMYGQLG-HGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSR 340

Query: 226 SRLYAFGIGSAVQL--DSPKSVHKTPQLIHGPWIASPVAMTAGE--DSLVSHSGGLVVKK 281
            R+YA+G+G A QL   S +SV  TPQ++HGPWIA P   T  +      S + G +VK 
Sbjct: 341 GRVYAWGLGGAGQLGNHSTRSV-TTPQVVHGPWIA-PNGSTIMDVNKQFNSRTIGYIVKH 398

Query: 282 IYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           I++GGDH   TV   +D V  DD R+L   +QIL +  ++L  C+R    +  + ++D +
Sbjct: 399 IFTGGDHCFATVISQNDIVKPDDCRILESTSQILTITEDQLMACQR----VPPNSSIDHE 454

Query: 342 LLLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           L+ YLETVF S  C+ GSFL ++ND H+ C+SK
Sbjct: 455 LMTYLETVFKSLSCVTGSFL-LKNDAHYGCSSK 486



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 64/96 (66%), Positives = 79/96 (82%), Gaps = 1/96 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  +YEETR IWFSED+ ED+NM FLIG LCGL IYN+ II++PFPLALYKK+L EP+
Sbjct: 795 YGMFKQYEETRIIWFSEDSLEDENMYFLIGILCGLVIYNFIIIDLPFPLALYKKLLHEPV 854

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
            L D+KD+SP LAKS+Q+ILDY E D E+VFG+ F 
Sbjct: 855 GLIDMKDMSPVLAKSMQNILDYEEADFEEVFGLHFE 890



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 109/235 (46%), Gaps = 58/235 (24%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGL-ASVSVVQACAGYSHCLVL 64
           +++ +   GE+++ G + +GQLG E   K+ Q IP    GL A V    AC  Y      
Sbjct: 72  YTVVITQIGEIYSCGNNDYGQLGHEKGRKRLQLIP----GLDAFVFKKAACGAY------ 121

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
                  H+LA+N+ G++F+WG +T GQLGL S +    S P+ VK L +  VVQ   G 
Sbjct: 122 -------HTLAINEWGQLFSWGSNTEGQLGLNSKNFMESS-PRMVKTLGTSVVVQIACGM 173

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
            H   LT++G                                      ELY+WG+N  GQ
Sbjct: 174 KHAFALTNNG--------------------------------------ELYSWGSNSEGQ 195

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           +G+        KP+ + + + +PIA IACG  HS  +SKS   ++ +G  +  QL
Sbjct: 196 LGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKS-GAVFGWGKNTFGQL 249



 Score = 77.4 bits (189), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 69/119 (57%), Gaps = 8/119 (6%)

Query: 417 YLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSN 476
           YLETVF S  C+ GSFL ++ND H+ C+SK+ GVD+      +  I  ++ ++++ L+  
Sbjct: 458 YLETVFKSLSCVTGSFL-LKNDAHYGCSSKHHGVDLDQASRLFGIIRELDNKTIQELIFT 516

Query: 477 L---AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGALPAF 532
               +++ S  +L   +  T    E+LR++L LPLYH F+NP     LH PF  A+ A 
Sbjct: 517 CITDSLIPSFVNLSSKIICT----ESLRIYLILPLYHGFVNPLNCNSLHKPFCKAVLAL 571


>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
            vitripennis]
          Length = 1083

 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/284 (46%), Positives = 172/284 (60%), Gaps = 45/284 (15%)

Query: 816  WYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNE 875
            W+      YFERL+ I+K  ++Y + QP V ++    +++N  L   L  L+ LN LNN 
Sbjct: 578  WWTKAPKHYFERLVRIYKSVVVYFINQPNVKETK--IVSWNSTLQSGLDTLKFLNKLNNS 635

Query: 876  TLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISG-RPNGST 934
                                   G+ V Y  FY+ +L    D+R DY RW+S    N   
Sbjct: 636  D---------------------DGKIVPYNVFYIRELTECIDVRGDYCRWLSEINKNSYH 674

Query: 935  RDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTN----FYLFLQTF---NP--HTLNQ 985
            + + CNYPF+FDA+AKT LLE DQ +QM+ AMN+       ++ L TF   NP   +  Q
Sbjct: 675  KIYFCNYPFLFDAEAKTMLLETDQALQMQSAMNEAASRSLTHMLLNTFHGINPDARSHRQ 734

Query: 986  YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
            ++ + VSR+NIV DT REL+ YT++D KKPL+V            KF GEEAEDAGGV++
Sbjct: 735  FVTLTVSRENIVADTFRELSDYTSDDLKKPLRV------------KFHGEEAEDAGGVKK 782

Query: 1046 EFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            EF MLLLKEILDPKYGMFKEYEETR+IWFSED+FED+ MYFLIG
Sbjct: 783  EFFMLLLKEILDPKYGMFKEYEETRTIWFSEDSFEDETMYFLIG 826



 Score =  193 bits (491), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 130/390 (33%), Positives = 207/390 (53%), Gaps = 39/390 (10%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+A+N+ G++F WG +  GQLGL +    + + P+ VK L +  VVQ   G  H L
Sbjct: 119 GASHSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHT-PRMVKALGTSIVVQIACGKKHTL 177

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVV-QAC 121
            LT+             GE++ WG ++ GQLGL   D K ++ PK + GLA++ +   AC
Sbjct: 178 ALTNN------------GELYAWGSNSDGQLGL-GQDVKIETRPKLITGLATIPIAFIAC 224

Query: 122 AGYSHCLVLTSSGVV--------------TCTHKENGCGSDPSQGVQSNLVQDSHTTITS 167
            GY H +V++ SG V                + K   C     +  +   V         
Sbjct: 225 GGY-HSIVVSKSGAVFGWGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVF 283

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G ++T G   YGQ+G + +N+    P+++  L+   +  I+CG  H+  L  S  +
Sbjct: 284 LTMDGGVFTCGAGMYGQLG-HGANSNEILPRQIIELMGSVVTQISCGKRHTLALVPSRGK 342

Query: 228 LYAFGIGSAVQLD--SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           +YA+G+G + QL   + +SV  TPQ++ GPW +   ++    DS  S S   VVK I+SG
Sbjct: 343 VYAWGLGGSGQLGSQTARSV-ATPQMVLGPWSSKNRSLAMEVDSASSTSEDCVVKHIFSG 401

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GDH   TVT+  D +  DD R+  P TQIL +N E+L  C++    +  + ++D DL++Y
Sbjct: 402 GDHCFATVTQKEDNIEPDDCRIYLPDTQILSINEEQLIACQK----VPVNASIDHDLMMY 457

Query: 346 LETVFLSPGCMNGSFLQVENDEHFSCNSKK 375
           +ETVF +  C+N SFL + N+ H++C+ ++
Sbjct: 458 IETVFKNQACINASFL-LANETHYNCSFRQ 486



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 66/102 (64%), Positives = 80/102 (78%), Gaps = 4/102 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+      EYEETR+IWFSED+FED+ M FLIG +CGLAIYN+ II +PFPLALYKK
Sbjct: 795 PKYGM----FKEYEETRTIWFSEDSFEDETMYFLIGLMCGLAIYNFIIIELPFPLALYKK 850

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
           +L EP+ L D+KD+SP LA+SLQ+ILDY E DLE VF + F 
Sbjct: 851 LLKEPVGLGDIKDMSPVLARSLQNILDYEEEDLESVFCLNFE 892



 Score =  110 bits (274), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 108/237 (45%), Gaps = 56/237 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++ +   GEVF+ G +  GQLG E   K+ Q IP    GL +    QA  G SH  
Sbjct: 69  GETHTVLITKDGEVFSCGNNDSGQLGHEKPTKRLQMIP----GLDAFIFKQAACGASH-- 122

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+N+ G++F WG +  GQLGL +    + + P+ VK L +  VVQ   
Sbjct: 123 ----------SVAVNNWGQLFCWGSNADGQLGLGTPLTIAHT-PRMVKALGTSIVVQIAC 171

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H L LT++                                      GELY WG+N  
Sbjct: 172 GKKHTLALTNN--------------------------------------GELYAWGSNSD 193

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           GQ+G+       T+P+ +  L  +PIA IACG  HS V+SKS   ++ +G  +  QL
Sbjct: 194 GQLGLGQDVKIETRPKLITGLATIPIAFIACGGYHSIVVSKS-GAVFGWGRNTFGQL 249



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 67/114 (58%), Gaps = 5/114 (4%)

Query: 416 LYLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVS 475
           +Y+ETVF +  C+N SFL + N+ H++C+ +  GVD++    C+  I+ I    V + +S
Sbjct: 456 MYIETVFKNQACINASFL-LANETHYNCSFRQHGVDLEFAARCFGMISEI----VNATIS 510

Query: 476 NLAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
            L        L+ SL  +PPD E LR++L LPLYH F NP     LH PF+ +L
Sbjct: 511 ELIHTCIAEFLLPSLSTSPPDIECLRIYLILPLYHGFANPDNCTTLHKPFSVSL 564



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 22/215 (10%)

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTH 140
           ++ WG   +G+LGL   + ++  +P+ +    + +V Q   G +H +++T  G V +C +
Sbjct: 28  MYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITKDGEVFSCGN 87

Query: 141 KENG--CGSDPSQGVQ-----------SNLVQDSHTTITSLNSPGELYTWGNNEYGQMGI 187
            ++G      P++ +Q                 SH+   ++N+ G+L+ WG+N  GQ+G+
Sbjct: 88  NDSGQLGHEKPTKRLQMIPGLDAFIFKQAACGASHS--VAVNNWGQLFCWGSNADGQLGL 145

Query: 188 NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV-- 245
               T    P+ V++L    +  IACG  H+  L+ +   LYA+G  S  QL   + V  
Sbjct: 146 GTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTNN-GELYAWGSNSDGQLGLGQDVKI 204

Query: 246 HKTPQLIHGPWIASPVAMTA--GEDSLVSHSGGLV 278
              P+LI G     P+A  A  G  S+V    G V
Sbjct: 205 ETRPKLITG-LATIPIAFIACGGYHSIVVSKSGAV 238


>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
            florea]
          Length = 1081

 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 129/283 (45%), Positives = 173/283 (61%), Gaps = 41/283 (14%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
            T  +W+L     YFERL+ + K  +++ ++Q  +    N  I+++  L   L  L  LN 
Sbjct: 578  TVTSWWLKTPPHYFERLVRVHKSVVLHYVKQFKL----NKAISWDMTLQVILDSLHLLNK 633

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            LNNE                       G KV Y+ F++P+L  + DIR DY +WIS + +
Sbjct: 634  LNNEG--------------------DEGNKVPYSTFHLPELIELIDIRTDYIKWISEKES 673

Query: 932  GSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQT--FNPHTL---NQY 986
             S +   CNYPF+ DA AK  LLE DQ IQM+ AMN+      +    F+P ++   NQ+
Sbjct: 674  FSCQKVFCNYPFLLDANAKIILLETDQAIQMQSAMNEAATLAVMNQMFFDPFSIPHHNQF 733

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            + + VSR+NIV DT+REL+QY ++D KKPL+V            KF GEEAEDAGGV++E
Sbjct: 734  VILNVSRENIVADTLRELSQYNSSDLKKPLRV------------KFHGEEAEDAGGVKKE 781

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            F MLLL+EILDPKYGMFK+YEETR IWFSED+ ED+NMYFLIG
Sbjct: 782  FFMLLLREILDPKYGMFKQYEETRIIWFSEDSLEDENMYFLIG 824



 Score =  209 bits (531), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 141/393 (35%), Positives = 212/393 (53%), Gaps = 46/393 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHC 61
           G +H+LA+N+ G++F+WG +T GQLGL S +    S P+ VK L +  VVQ AC      
Sbjct: 119 GAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESS-PRMVKTLGTSVVVQIAC------ 171

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVV-QA 120
                  G+ H+ AL + GE+++WG ++ GQLGL   D K +  PK +     + +   A
Sbjct: 172 -------GMKHAFALTNNGELYSWGSNSEGQLGL-GTDIKYEIKPKFISAFIGIPIAFIA 223

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGS-------DPSQGVQSNLVQDSHTTITS------ 167
           C GY H + ++ SG V    K N  G        D +   Q   +Q++     +      
Sbjct: 224 CGGY-HSIAISKSGAVFGWGK-NTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFS 281

Query: 168 --LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             L   G ++T G   YGQ+G + SN+    P++V  L+   +  I+CG  H+  L  S 
Sbjct: 282 VFLTVDGGVFTCGAGMYGQLG-HGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSR 340

Query: 226 SRLYAFGIGSAVQL--DSPKSVHKTPQLIHGPWIASPVAMTAGE--DSLVSHSGGLVVKK 281
            R+YA+G+G A QL   S +SV  TPQ++HGPWIA P   T  +      S + G +VK 
Sbjct: 341 GRVYAWGLGGAGQLGNHSTRSV-TTPQVVHGPWIA-PNGSTIMDVNKQFNSRTIGYIVKH 398

Query: 282 IYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           I++GGDH   TV   +D V  DD R+L   +QIL +  ++L  C+R +     + ++D +
Sbjct: 399 IFTGGDHCFATVISQNDIVKPDDCRILETTSQILTITEDQLMACQRVL----PNSSIDHE 454

Query: 342 LLLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           L+ YLETVF S  C+ GSFL ++ND H+ C+SK
Sbjct: 455 LMTYLETVFKSLSCVTGSFL-LKNDAHYGCSSK 486



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 65/102 (63%), Positives = 80/102 (78%), Gaps = 4/102 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+      +YEETR IWFSED+ ED+NM FLIG LCGL IYN+ II++PFPLALYKK
Sbjct: 793 PKYGM----FKQYEETRIIWFSEDSLEDENMYFLIGILCGLVIYNFIIIDLPFPLALYKK 848

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
           +L EP+ L D+KD+SP LAKS+Q+ILDY E D E+VFG+ F 
Sbjct: 849 LLHEPVGLIDMKDMSPVLAKSMQNILDYEEADFEEVFGLHFE 890



 Score =  110 bits (276), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 109/235 (46%), Gaps = 58/235 (24%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGL-ASVSVVQACAGYSHCLVL 64
           +++ +   GE+++ G + +GQLG E   K+ Q IP    GL A V    AC  Y      
Sbjct: 72  YTVVITQIGEIYSCGNNDYGQLGHEKGRKRLQLIP----GLDAFVFKKAACGAY------ 121

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
                  H+LA+N+ G++F+WG +T GQLGL S +    S P+ VK L +  VVQ   G 
Sbjct: 122 -------HTLAINEWGQLFSWGSNTEGQLGLNSKNFMESS-PRMVKTLGTSVVVQIACGM 173

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
            H   LT++G                                      ELY+WG+N  GQ
Sbjct: 174 KHAFALTNNG--------------------------------------ELYSWGSNSEGQ 195

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           +G+        KP+ + + + +PIA IACG  HS  +SKS   ++ +G  +  QL
Sbjct: 196 LGLGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKS-GAVFGWGKNTFGQL 249



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 8/119 (6%)

Query: 417 YLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSN 476
           YLETVF S  C+ GSFL ++ND H+ C+SK+ GVD+      +  I  ++ ++++ L+  
Sbjct: 458 YLETVFKSLSCVTGSFL-LKNDAHYGCSSKHHGVDLDQASRLFGIIRELDNKTIQELIFT 516

Query: 477 LAILASHAHLVKSLWNTPPD---AEALRMFLTLPLYHEFMNPRQHEILHMPFAGALPAF 532
             I +    L+ S  N        E+LR++L LPLYH F+NP     LH PF  A+ A 
Sbjct: 517 CIIDS----LIPSFVNLSSKIICTESLRIYLILPLYHGFVNPLNCNSLHKPFCKAVLAL 571


>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
            impatiens]
          Length = 1088

 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 129/283 (45%), Positives = 169/283 (59%), Gaps = 43/283 (15%)

Query: 814  RNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLN 873
            RNW+L     YFERL+ + K  +++ ++Q       N  I ++  L   L  L  LN LN
Sbjct: 585  RNWWLEAPPHYFERLVRVHKSVVLHYVKQ----SKPNKGILWDVTLQVILDSLYLLNKLN 640

Query: 874  NETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGS 933
            NE                       G KV Y+ F++P+L  + DIR DY +WIS + + S
Sbjct: 641  NEDSE--------------------GNKVPYSTFHLPELVELIDIRADYIKWISEKESFS 680

Query: 934  TRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF-----YLFLQTFNPHTL--NQY 986
             +   CNYPF+ DA AK  LLE DQ IQM+ AMN+         +FL  F+  +   NQ+
Sbjct: 681  YQKVFCNYPFLLDANAKIILLETDQAIQMQSAMNEAATRAVMNQIFLDPFSVDSRHHNQF 740

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            + + VSR+NIV DT+REL  Y ++D KKPL+V            KF GEEAEDAGGV++E
Sbjct: 741  VILNVSRENIVADTLRELGHYNSSDLKKPLRV------------KFHGEEAEDAGGVKKE 788

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            F MLLL+EILDPKYGMFK+YEETR IWF+ED+FED+ MYFLIG
Sbjct: 789  FFMLLLREILDPKYGMFKQYEETRVIWFNEDSFEDEKMYFLIG 831



 Score =  209 bits (533), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 135/390 (34%), Positives = 209/390 (53%), Gaps = 40/390 (10%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H++A+N+ G++F+WG ++ GQLGL S +    S P+ VK L +  +VQ   G  H L
Sbjct: 124 GAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECS-PRMVKTLGTSIIVQVACGMKHAL 182

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVV-QAC 121
            LT+             GE+++WG ++ GQLGL   D +S+  PK +  LA V +   AC
Sbjct: 183 ALTNN------------GELYSWGSNSEGQLGL-GVDIRSEVKPKLINTLAGVPIAFIAC 229

Query: 122 AGYSHCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTI----------TS 167
            GY H + ++ SG +      T  + G     ++ +   L    +  I            
Sbjct: 230 GGY-HSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVF 288

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G ++T G   YGQ+G + SN     P++V  L+   +  I+CG  H+  L  S  R
Sbjct: 289 LTVDGGVFTCGAGMYGQLG-HGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGR 347

Query: 228 LYAFGIGSAVQL--DSPKSVHKTPQLIHGPWIA-SPVAMTAGEDSLVSHSGGLVVKKIYS 284
           +YA+G+G A QL  +S +S+  TPQ++HGPW+A +  +M   +    S + G VVK I++
Sbjct: 348 VYAWGLGGAGQLGNNSTRSI-PTPQVVHGPWVAPNGSSMMDLDKQFSSCTVGYVVKHIFT 406

Query: 285 GGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLL 344
           GGDH   TV   +D +  DD R L  ++QIL +  E+L  C+R    +    ++D +L+ 
Sbjct: 407 GGDHCFATVVTQNDNIKPDDCRTLESSSQILTITEEQLMACQR----VPPYSSVDHELMT 462

Query: 345 YLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           YLETVF S  C+NGSFL  +ND  + C+SK
Sbjct: 463 YLETVFKSLSCVNGSFL-FKNDARYGCSSK 491



 Score =  139 bits (350), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 63/102 (61%), Positives = 79/102 (77%), Gaps = 4/102 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+      +YEETR IWF+ED+FED+ M FLIG LCGL IYN+ II++PFPLALYKK
Sbjct: 800 PKYGM----FKQYEETRVIWFNEDSFEDEKMYFLIGILCGLVIYNFIIIDLPFPLALYKK 855

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
           +L EP+ L D+KD+SP  AKS+Q+ILDY E D E+VFG+ F 
Sbjct: 856 LLREPVALNDIKDMSPVFAKSMQNILDYEEADFEEVFGLHFE 897



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 112/264 (42%), Gaps = 78/264 (29%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS------- 66
           G++F WG   HG+LGL   + +   +P +V    +  + Q   G ++ +V+T        
Sbjct: 31  GDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGKIYSC 90

Query: 67  -------------------------------TTGLWHSLALNDCGEVFTWGGDTHGQLGL 95
                                            G +H++A+N+ G++F+WG ++ GQLGL
Sbjct: 91  GNNDYGQLGHERGRKRLQLILGLDAFVFKKVACGAYHTIAVNEWGQLFSWGSNSEGQLGL 150

Query: 96  ESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQS 155
            S +    S P+ VK L +  +VQ   G  H L LT++G                     
Sbjct: 151 NSKNFMECS-PRMVKTLGTSIIVQVACGMKHALALTNNG--------------------- 188

Query: 156 NLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGA 215
                            ELY+WG+N  GQ+G+     +  KP+ + +L  +PIA IACG 
Sbjct: 189 -----------------ELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGG 231

Query: 216 NHSFVLSKSVSRLYAFGIGSAVQL 239
            HS  +SKS   ++ +G  +  QL
Sbjct: 232 YHSIAISKS-GAIFGWGKNTFGQL 254



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 65/119 (54%), Gaps = 8/119 (6%)

Query: 417 YLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSN 476
           YLETVF S  C+NGSFL  +ND  + C+SK+ GVD+      +  I  ++  +++ L+  
Sbjct: 463 YLETVFKSLSCVNGSFL-FKNDARYGCSSKHHGVDLDQATKLFGIIRELDNSTIQELI-- 519

Query: 477 LAILASHAHLVKSLWNTPPD---AEALRMFLTLPLYHEFMNPRQHEILHMPFAGALPAF 532
                    L+ S  N PP     E LR++L LPLYH F+NP    +LH PF  A+ A 
Sbjct: 520 --FTCISDSLISSFVNLPPKIISPECLRIYLILPLYHGFVNPLNCNLLHKPFCKAILAL 576



 Score = 39.7 bits (91), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 3/89 (3%)

Query: 167 SLNSPGELYTWGNNEYGQMGINN-SNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
           SL   G+++ WGN  +G++G+    +  +  P +V+      I  IACG N++ V++   
Sbjct: 26  SLLKKGDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHD- 84

Query: 226 SRLYAFGIGSAVQLDSPKSVHKTPQLIHG 254
            ++Y+ G     QL   +   K  QLI G
Sbjct: 85  GKIYSCGNNDYGQLGHERG-RKRLQLILG 112


>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
          Length = 1052

 Score =  237 bits (605), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 140/337 (41%), Positives = 176/337 (52%), Gaps = 87/337 (25%)

Query: 810  GITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKL 869
            G  +  W    + DYF RLI IFKQ +++++  P   D T        +L  CL VL+K+
Sbjct: 553  GKVYDMWLAAANTDYFIRLINIFKQVVVHIIHLPSSFDPTE-TTRLGIRLKMCLDVLKKI 611

Query: 870  NSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGR 929
            N++N +  T                     +KV +  FY+P+L    D++ DYF+W+   
Sbjct: 612  NNVNRQAAT---------------------KKVGHEQFYIPELTDKVDVKRDYFKWLVDA 650

Query: 930  PNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTN----FYLFLQTFNPHTLNQ 985
            PN   R  LCNY F+FDAKAKT LLE DQ IQM  AM +      F+ F  T       Q
Sbjct: 651  PNKEFR--LCNYSFVFDAKAKTLLLEADQNIQMHSAMQEAATRGVFFGFPAT------QQ 702

Query: 986  YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
            YL +EV RDN+V DTI EL++  + D KKPLKV            KF GEEAEDAGGVR+
Sbjct: 703  YLILEVRRDNLVNDTINELSKCASQDLKKPLKV------------KFHGEEAEDAGGVRK 750

Query: 1046 EFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFK 1105
            EF MLLLKEILDPKYGMF  Y+ETR+IWFSE + E+Q MYFL                  
Sbjct: 751  EFFMLLLKEILDPKYGMFAHYQETRAIWFSELSLEEQGMYFL------------------ 792

Query: 1106 EYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                   IG LCGLAIYN+T+
Sbjct: 793  -----------------------IGLLCGLAIYNFTI 806



 Score =  182 bits (462), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 130/395 (32%), Positives = 191/395 (48%), Gaps = 43/395 (10%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LA N+ GEVF WG +++GQLGL + ++     PK VK LA+  VVQ   G S   
Sbjct: 92  GAQHTLAQNEWGEVFAWGSNSNGQLGL-NVEESMMPTPKMVKSLATKQVVQIACGRS--- 147

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL + GE++ WG ++HGQLGL S+    ++ P  VK L  + +     
Sbjct: 148 ---------HSMALTNVGEIYCWGSNSHGQLGLGSSG-TPETKPCLVKLLQGIPISHISC 197

Query: 123 GYSHCLVLTSSGVVTCTHKEN------GCGSDPSQGVQSNLVQDSHTT--------ITSL 168
           G      +T SG V    K +      G  +D  Q  Q   ++    T          +L
Sbjct: 198 GADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAAL 257

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
              G ++T+G   YGQ+G   S   +  P++V  L+   +  I CG  H+     S  R+
Sbjct: 258 TRDGGVFTFGAGMYGQLGHCTSANEML-PRKVLELMGTTVTQICCGRCHTLAFVPSKGRI 316

Query: 229 YAFGIGSAVQLDSPKSVH-KTPQLIHGPWIAS--------PVAMTAGEDSLVSHSGGLVV 279
           YAFG+G + QL +  + +  +PQL+ GPW  S         +A    E      S  +VV
Sbjct: 317 YAFGLGGSGQLGTKSTANVNSPQLVIGPWETSNNSIKDVKDLATETAEALSAIQSKRVVV 376

Query: 280 KKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLD 339
           + I+ GGD S   V   ++   S D+R    ATQIL +  + +K    +V  L  D  +D
Sbjct: 377 RNIFCGGDQSFSLVCPYTESFESADYREHAVATQILSIFPDEIK----KVRALHPDVAVD 432

Query: 340 QDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
            DLL Y+ETVF    C N SFL+ +   H+ C+SK
Sbjct: 433 LDLLRYVETVFSHLACYNASFLRADG-SHYGCSSK 466



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 59/101 (58%), Positives = 74/101 (73%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+       Y+ETR+IWFSE + E+Q M FLIG LCGLAIYN+TIIN+PFPL LYKK
Sbjct: 763 PKYGM----FAHYQETRAIWFSELSLEEQGMYFLIGLLCGLAIYNFTIINLPFPLVLYKK 818

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L EP+ L D+  L PTL +SL  +LDY   D+EDVF ++F
Sbjct: 819 LLAEPVDLDDIGGLCPTLMRSLHSLLDYEGDDVEDVFCLSF 859



 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 115/234 (49%), Gaps = 56/234 (23%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H++ +   G++F++G + +GQLG      +S++  + V GL + ++ Q   G  H     
Sbjct: 45  HTILVMKDGKLFSFGLNDYGQLG----HCRSRTRAEPVDGLEAHNITQVACGAQH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  +LA N+ GEVF WG +++GQLGL + ++     PK VK LA+  VVQ   G S
Sbjct: 96  -------TLAQNEWGEVFAWGSNSNGQLGL-NVEESMMPTPKMVKSLATKQVVQIACGRS 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           H + LT+ G                                      E+Y WG+N +GQ+
Sbjct: 148 HSMALTNVG--------------------------------------EIYCWGSNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           G+ +S T  TKP  V+ L  +PI+ I+CGA+ SF ++ S   +Y +G  S  QL
Sbjct: 170 GLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPS-GAVYGWGKNSFGQL 222



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 47/113 (41%), Positives = 65/113 (57%), Gaps = 5/113 (4%)

Query: 417 YLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSN 476
           Y+ETVF    C N SFL+ +   H+ C+SKN G+D+ L  + +  I+RIE  ++  L+  
Sbjct: 438 YVETVFSHLACYNASFLRADGS-HYGCSSKNHGLDLHLAAETFGQISRIEHPTICVLLRR 496

Query: 477 LAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
                    L+ SL    PD E LR++L LPLYHEF+ P+  E LH PFA  L
Sbjct: 497 CIC----NELLSSLSPVIPDIEVLRVYLILPLYHEFLQPKFFEELHFPFACVL 545


>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 1044

 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 124/277 (44%), Positives = 170/277 (61%), Gaps = 39/277 (14%)

Query: 816  WYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNE 875
            W+ +M+ DYFERL+ ++K  + Y L+    +     +  F       L VL  LN LNN 
Sbjct: 547  WWSVMTSDYFERLVRLYKDVVSYHLRS---LKPEQENKYFAESTIVALDVLAFLNGLNN- 602

Query: 876  TLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTR 935
                       +V N++ P         Y  FY+P+L  V D+R+DY +W++      T+
Sbjct: 603  -----------SVENLKVP---------YDTFYLPELRDVIDVRVDYVKWLADNSAPGTK 642

Query: 936  DFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPH---TLNQYLEVEVS 992
             F CNYPF+FDA+AKT+LL+ DQ +QM+ AM+Q    L  Q F P    +  Q+L + V+
Sbjct: 643  LFFCNYPFLFDAEAKTSLLQTDQVLQMQTAMSQALPRLVTQLFAPFIGMSGEQFLTLHVT 702

Query: 993  RDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLL 1052
            R+NIV++TI +LA Y + D KKPL+V            KF GEEAEDAGGVR+EF ML+L
Sbjct: 703  RENIVQNTIDQLANYDSRDLKKPLRV------------KFLGEEAEDAGGVRKEFFMLVL 750

Query: 1053 KEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +E+LDPKYGMFK Y+ETR+IWFSE +FED+ MYFLIG
Sbjct: 751  REVLDPKYGMFKNYDETRTIWFSEVSFEDELMYFLIG 787



 Score =  182 bits (462), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 120/384 (31%), Positives = 199/384 (51%), Gaps = 39/384 (10%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LA N+ G++F WG D+HGQLG       +Q +PK +K LA+  +VQ   G +      
Sbjct: 95  HTLAFNEWGQLFGWGSDSHGQLGFNGT---TQPLPKIIKSLATFHIVQISCGKN------ 145

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 HSLAL + GE+++WGG+  GQLGL     + +  P  +K L  + +     G +
Sbjct: 146 ------HSLALTNNGELYSWGGNYDGQLGL-GMRSEYEKQPTLIKSLLGIPIAFIACGSN 198

Query: 126 HCLVLTSSGVV----TCTHKENGCGSD-----PSQ-----GVQSNLVQDSHTTITSLNSP 171
           H   L+ SG +      T+ + G   +     P+Q      ++   +         L++ 
Sbjct: 199 HSFALSKSGAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFLSAD 258

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G ++T G   YGQ+G  +++  +  P+++  L+   +  ++CG  H+  L  S  R+Y+F
Sbjct: 259 GGVFTCGAGMYGQLGHGSTSNEIL-PRKIMELMGSTVTQVSCGKRHTLALVPSRGRVYSF 317

Query: 232 GIGSAVQLDSP-KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSI 290
           G+G   QL +  K+   TPQ++ GPW+ SP  +    D   + S  ++V  I+SGG+ S 
Sbjct: 318 GLGGGGQLGTRVKTNCSTPQVVLGPWV-SPSGVPVITDKKKT-SENVLVTHIFSGGNQSF 375

Query: 291 VTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVF 350
           VTV      +  +D R+    TQIL +  +++ +C +     K  + +D+DL LY+ETVF
Sbjct: 376 VTVVPYKANIHPEDNRIFKEKTQILTIKPDKISQCRKT----KPGDPVDEDLFLYMETVF 431

Query: 351 LSPGCMNGSFLQVENDEHFSCNSK 374
            S   +NGSFL + ND+H+ C  K
Sbjct: 432 RSQAAINGSFL-LSNDDHYCCTVK 454



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/101 (68%), Positives = 81/101 (80%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+       Y+ETR+IWFSE +FED+ M FLIG LCGLAIYN TII++PFPLALYKK
Sbjct: 756 PKYGM----FKNYDETRTIWFSEVSFEDELMYFLIGLLCGLAIYNQTIIDLPFPLALYKK 811

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L E + L+DLK LSPTLAKSLQD+LDY EPDL DVF +TF
Sbjct: 812 LLHEKVTLKDLKGLSPTLAKSLQDLLDYTEPDLPDVFCLTF 852



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 134/282 (47%), Gaps = 75/282 (26%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHCLVL 64
           H++ L   GEVF+ G +   QLG     KK ++ P++V+GL    + + +C G       
Sbjct: 45  HTVMLTKSGEVFSCGNNDLDQLG----HKKQRTKPEKVEGLDFYRITKISCGGN------ 94

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
                  H+LA N+ G++F WG D+HGQLG       +Q +PK +K LA+  +VQ   G 
Sbjct: 95  -------HTLAFNEWGQLFGWGSDSHGQLGFNGT---TQPLPKIIKSLATFHIVQISCGK 144

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
           +H L LT++G                                      ELY+WG N  GQ
Sbjct: 145 NHSLALTNNG--------------------------------------ELYSWGGNYDGQ 166

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL---DS 241
           +G+   +    +P  ++SL+ +PIA IACG+NHSF LSKS   +Y +G  +  QL   D 
Sbjct: 167 LGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKS-GAIYGWGKNTYGQLGLNDE 225

Query: 242 PKSVH----KTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
              +H    KT + I   +IA       GED  + +S  GG+
Sbjct: 226 ENKLHPTQLKTLRSIRVKYIA------CGEDFSAFLSADGGV 261



 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/123 (42%), Positives = 73/123 (59%), Gaps = 6/123 (4%)

Query: 408 GDCVPKS-WLYLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIE 466
           GD V +  +LY+ETVF S   +NGSFL + ND+H+ C  KN GVD+   ++ +  IARIE
Sbjct: 416 GDPVDEDLFLYMETVFRSQAAINGSFL-LSNDDHYCCTVKNHGVDLNKAENIFSEIARIE 474

Query: 467 RESVRSLVSNLAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFA 526
            +S+  L+ +        H++ SL   P D E+LR +L LPLYH+F NPR  + L   F 
Sbjct: 475 NQSICDLIWD----GLTEHVIPSLPLNPVDIESLRCYLILPLYHQFENPRNCDKLQAVFG 530

Query: 527 GAL 529
             L
Sbjct: 531 KKL 533


>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
          Length = 1042

 Score =  222 bits (566), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 127/291 (43%), Positives = 170/291 (58%), Gaps = 45/291 (15%)

Query: 803  PDLEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFC 862
            P    V G+    W+  MS DYFE LI +FK  + ++L+   + +  N  + ++  L   
Sbjct: 536  PQASKVVGM----WWTTMSCDYFEHLIRVFKSVVSFILRNQRIPE--NKTVFYDPSLVAM 589

Query: 863  LQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDY 922
            L  L  LN LN+                        G KV Y  FY+ DL    D+R+DY
Sbjct: 590  LDTLTYLNKLNHSV---------------------EGLKVPYDTFYISDLCDYLDVRVDY 628

Query: 923  FRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMN----QTNFYLFLQTF 978
              W++  PN + + FLCNYPFIFDA+AKT LLE DQRIQM  AM     Q    +  +  
Sbjct: 629  VMWLTD-PN-TGKLFLCNYPFIFDAQAKTQLLETDQRIQMHKAMQSAAQQAVLSMLFRPA 686

Query: 979  NPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++ Q+L + V+RD+IV+D +REL+    +D KKPL+V            KF GEEAE
Sbjct: 687  GVLSITQFLVLNVTRDHIVQDALRELSNVDPDDLKKPLRV------------KFCGEEAE 734

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            DAGGV +EF +LLLKEILDPKYGMFKEYEETR++WFSE++FE++ +YFLIG
Sbjct: 735  DAGGVTKEFFLLLLKEILDPKYGMFKEYEETRALWFSENSFEEEPVYFLIG 785



 Score =  173 bits (439), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 129/389 (33%), Positives = 197/389 (50%), Gaps = 45/389 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+  GEVF+WG D +GQLG +      Q +PK +K LA   VVQ  AG  H  
Sbjct: 92  GEMHSLALSRWGEVFSWGSDNYGQLGHQLGGT-LQIVPKLIKSLAKYQVVQIAAGQRH-- 148

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+AL + GE+F WG +  GQLGL +     +S P  V  L+ +       
Sbjct: 149 ----------SVALTNAGEIFVWGANDFGQLGLGTI-TPYESTPTTVCSLSGIPFALIAC 197

Query: 123 GYSHCLVLTSSGVVTCTHKE-NG--------CGSDPSQ--GVQSNLVQ-----DSHTTIT 166
           G +H   ++ SG V    K  NG            P+Q   ++++ V+     D  +T  
Sbjct: 198 GANHTFAVSKSGAVFGWGKNINGQLGLNDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFL 257

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L+  G +++ G   YGQ+G   ++  +  P++V  L+   I  I+CG  HS     S  
Sbjct: 258 TLD--GGVFSCGAGMYGQLGHGGTSNEIL-PRQVLELMGSTITQISCGRQHSLAFVPSRG 314

Query: 227 RLYAFGIGSAVQLDSPK-SVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y++G+G A QL   K S   TPQ++ GPW++         ++ V+     V+ +IY+G
Sbjct: 315 RVYSYGLGGAGQLGLRKPSNASTPQVVLGPWVSPSGVPVVPNNAPVN----TVINRIYAG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GDH  V+VT+    +  +DFR   P +QIL +  +RL+ C +    +  +  ++Q++L Y
Sbjct: 371 GDHCFVSVTEKKAKIEPNDFRNYEPESQILTLRVDRLEPCAK----VAVNGQVEQEILAY 426

Query: 346 LETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           LE VF +  C N SFL     EH+ C SK
Sbjct: 427 LEVVFKNLACWNASFLVA---EHYYCTSK 452



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/121 (52%), Positives = 86/121 (71%), Gaps = 8/121 (6%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+      EYEETR++WFSE++FE++ + FLIG +CGLAIYN+TII++PFPLALYKK
Sbjct: 754 PKYGM----FKEYEETRALWFSENSFEEEPVYFLIGLICGLAIYNFTIIDLPFPLALYKK 809

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFERLILIF 832
           +L+EP+ L DLK LSP +A SLQ ILDY E D   +F + F     +  D++ E  ++  
Sbjct: 810 LLNEPVGLADLKGLSPMMANSLQSILDYNESDFHSLFDLCFE----ISRDEFGESRVVEL 865

Query: 833 K 833
           K
Sbjct: 866 K 866



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 112/236 (47%), Gaps = 60/236 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHC 61
           G  H+L L   G+V++ G + +GQLG +   K+    P+ V GL + S++  AC      
Sbjct: 42  GANHTLFLTKDGKVYSCGSNDYGQLGHDQPRKR----PQLVSGLDAYSIINVAC------ 91

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  G  HSLAL+  GEVF+WG D +GQLG +      Q +PK +K LA   VVQ  
Sbjct: 92  -------GEMHSLALSRWGEVFSWGSDNYGQLGHQLGG-TLQIVPKLIKSLAKYQVVQIA 143

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
           AG  H + LT++                                      GE++ WG N+
Sbjct: 144 AGQRHSVALTNA--------------------------------------GEIFVWGAND 165

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
           +GQ+G+       + P  V SL  +P ALIACGANH+F +SKS +    FG G  +
Sbjct: 166 FGQLGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGA---VFGWGKNI 218



 Score =  105 bits (262), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/129 (42%), Positives = 74/129 (57%), Gaps = 7/129 (5%)

Query: 401 CVCPTVLGDCVPKSWLYLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYD 460
           C    V G    +   YLE VF +  C N SFL  E   H+ C SK+ GVDM+  +  + 
Sbjct: 410 CAKVAVNGQVEQEILAYLEVVFKNLACWNASFLVAE---HYYCTSKHHGVDMEEAERAFS 466

Query: 461 TIARIERESVRSLVSNLAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEI 520
            IA+IE E+++ L+ N  +      ++  L  +PPD E LR++L LPLYHEF NP+QH  
Sbjct: 467 IIAKIEHETIKELIWNHVV----NDILGQLLPSPPDVETLRIYLVLPLYHEFNNPKQHLK 522

Query: 521 LHMPFAGAL 529
           LH PFA AL
Sbjct: 523 LHKPFASAL 531



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 13/170 (7%)

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTH 140
           +F WG   HG+LGL   +++    PK +    + SV++A  G +H L LT  G V +C  
Sbjct: 1   MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGS 60

Query: 141 KENG-CGSD-PSQGVQSNLVQDSHTTIT---------SLNSPGELYTWGNNEYGQMGINN 189
            + G  G D P +  Q     D+++ I          +L+  GE+++WG++ YGQ+G   
Sbjct: 61  NDYGQLGHDQPRKRPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGSDNYGQLGHQL 120

Query: 190 SNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
             T    P+ ++SL    +  IA G  HS  L+ +   ++ +G     QL
Sbjct: 121 GGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNA-GEIFVWGANDFGQL 169


>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
          Length = 1057

 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/344 (40%), Positives = 185/344 (53%), Gaps = 90/344 (26%)

Query: 809  FGITFRNWYLLMSDDYFERLILIFKQCLIYLL--QQPGVVDSTNGD----ITFNRKLSFC 862
            F I  R W+   S +YFERL+  FK  ++Y++  + P VV S NG+    I +   L+  
Sbjct: 549  FTIVSR-WWANQSLEYFERLVENFKHVILYIIHFKFPKVVGS-NGEERQEIRYEPNLAAM 606

Query: 863  LQV---LQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIR 919
            L +   L K+N L  +                        +K+ Y  F++ ++  + DIR
Sbjct: 607  LDIVGILYKINHLERK------------------------QKLPYEQFHIHEIDDLIDIR 642

Query: 920  IDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFN 979
            +DY RW++   N  T   LCNYPFIF+A AK  LL+ DQ +QM  AM       FL    
Sbjct: 643  LDYVRWVTD--NNGTYFSLCNYPFIFNASAKMYLLQTDQGLQMHQAMQDAAHASFLSFLR 700

Query: 980  PH-TLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
            P   ++Q++ + VSR+NIV+DTIRELAQY+ ND KKPLK+            KF GEEAE
Sbjct: 701  PDVNVSQFIVLNVSRENIVQDTIRELAQYSANDLKKPLKI------------KFHGEEAE 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGG+R+EF MLLLK+ILDPKYGMFK YEE+R+IWF+ED F++                 
Sbjct: 749  DAGGLRKEFFMLLLKDILDPKYGMFKTYEESRAIWFTEDFFDN----------------- 791

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                     EET              M+ LIG LCGLAIYN+T+
Sbjct: 792  ---------EET--------------MFALIGILCGLAIYNFTI 812



 Score =  164 bits (415), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 124/390 (31%), Positives = 201/390 (51%), Gaps = 40/390 (10%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL + G+VF+WG ++ GQLG ++ D ++ + P+ +K +A+ +VVQ  +G     
Sbjct: 97  GTTHSLALTNWGQVFSWGSNSIGQLGHDT-DLQTYTTPRMIKTIATKTVVQIASGQ---- 151

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL + GE+F+WG + +GQLGL +  +K  + P  VK LA + +     
Sbjct: 152 --------FHSLALTNSGELFSWGANGYGQLGLGTTGEKVVT-PTLVKSLAGIPIAFIAC 202

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN------------- 169
           G +H   ++ SG +    K N  G      + S        T+ +L              
Sbjct: 203 GGNHSFAVSKSGAIFGWGK-NTFGQLGLNDLVSRCFPQQLKTLRNLGVRYISCGDDFSAF 261

Query: 170 --SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
               G ++T G   +GQ+G    +  +  P+ V  L+   I  IACG  H+     S  +
Sbjct: 262 LTQEGGVFTCGAGTFGQLGHGTCSNEIL-PRMVFELMGSKITQIACGRRHTLAFVPSRGK 320

Query: 228 LYAFGIGSAVQLDSPK-SVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           +Y FG+G   QL     S + TPQ++ GPWI  P   T    S    +  L+V KI++GG
Sbjct: 321 IYGFGLGGVGQLGVGVISNYNTPQIVRGPWI-DPGPKTIDTIS-PPPATQLIVGKIFAGG 378

Query: 287 DHSIVT-VTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           D   V+ +    + + S D+R+ +P TQIL ++     E  +++  ++ +ET+D DLL  
Sbjct: 379 DQCFVSLLVDDPESIGSADYRLYDPNTQILTMS----AEISKKLCHIQPEETIDIDLLSV 434

Query: 346 LETVFLSPGCMNGSFLQVENDEHFSCNSKK 375
           +ETVF S  C NGS+L + N++H  C+S++
Sbjct: 435 IETVFKSLACFNGSWL-LPNEQHLCCSSRQ 463



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 64/102 (62%), Positives = 81/102 (79%), Gaps = 5/102 (4%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCF-LIGTLCGLAIYNYTIINMPFPLALYK 771
           PK G+       YEE+R+IWF+ED F+++   F LIG LCGLAIYN+TIIN+PFPLALYK
Sbjct: 768 PKYGM----FKTYEESRAIWFTEDFFDNEETMFALIGILCGLAIYNFTIINLPFPLALYK 823

Query: 772 KILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           K+LDEP+ L DL+DLSPT+A+S+Q ILDY E D E+VF +TF
Sbjct: 824 KLLDEPVDLSDLRDLSPTVAQSMQSILDYTESDFEEVFDLTF 865



 Score =  121 bits (303), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 118/265 (44%), Gaps = 81/265 (30%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS--------- 66
           V+ WG   HG+LGL   + +   +P+ +    S SV QA  G SH L+LT          
Sbjct: 3   VYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGN 62

Query: 67  --------------------------------TTGLWHSLALNDCGEVFTWGGDTHGQLG 94
                                           + G  HSLAL + G+VF+WG ++ GQLG
Sbjct: 63  NDHGQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNSIGQLG 122

Query: 95  LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQ 154
            ++ D ++ + P+ +K +A+ +VVQ  +G  H L LT+S                     
Sbjct: 123 HDT-DLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNS--------------------- 160

Query: 155 SNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACG 214
                            GEL++WG N YGQ+G+  +   V  P  V+SL  +PIA IACG
Sbjct: 161 -----------------GELFSWGANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACG 203

Query: 215 ANHSFVLSKSVSRLYAFGIGSAVQL 239
            NHSF +SKS   ++ +G  +  QL
Sbjct: 204 GNHSFAVSKS-GAIFGWGKNTFGQL 227



 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 72/112 (64%), Gaps = 5/112 (4%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           +ETVF S  C NGS+L + N++H  C+S+ PGVDM+  ++ ++ I +IE ++++ ++   
Sbjct: 435 IETVFKSLACFNGSWL-LPNEQHLCCSSRQPGVDMEAAEETFENIRKIEHDTLKQMIWES 493

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
                 + LV S    P D E LR++LTLP+YHEF+N + +  LH PF+ A+
Sbjct: 494 ISSDLISSLVAS----PADVETLRIYLTLPMYHEFINSKNYSKLHSPFSLAV 541



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 34/230 (14%)

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTH 140
           V+ WG   HG+LGL   + +   +P+ +    S SV QA  G SH L+LT  G + +C +
Sbjct: 3   VYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGN 62

Query: 141 KENG-CGSD----PSQGVQ--SNL-------VQDSHTTITSLNSPGELYTWGNNEYGQMG 186
            ++G  G D    P++  Q  S+L       V    T   +L + G++++WG+N  GQ+G
Sbjct: 63  NDHGQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNSIGQLG 122

Query: 187 INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH 246
            +    T T P+ ++++    +  IA G  HS  L+ S   L+++G     QL    +  
Sbjct: 123 HDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNS-GELFSWGANGYGQLGLGTT-- 179

Query: 247 KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKS 296
                  G  + +P        +LV    G+ +  I  GG+HS   V+KS
Sbjct: 180 -------GEKVVTP--------TLVKSLAGIPIAFIACGGNHSFA-VSKS 213


>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
          Length = 1048

 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/281 (43%), Positives = 170/281 (60%), Gaps = 45/281 (16%)

Query: 816  WYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNE 875
            W    S  YFERL+ I+K  ++++++Q     ++N  +++N  L   L++LQ L  LN  
Sbjct: 549  WSSYASAYYFERLVRIYKSTVLHIVEQ----STSNKTVSWNENLKAVLELLQLLYRLN-- 602

Query: 876  TLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTR 935
                        V+ IR P         Y  F++P+L+   DI  DY  W+S       R
Sbjct: 603  -----------IVAGIRVP---------YETFHLPELSEHIDINRDYLMWMSEEDRSYYR 642

Query: 936  D-FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQT------NFYLFLQTFNPHTLNQYLE 988
              + CNYPF+FDA+AKTTLLE DQ IQM+ AM++       +    L + NP   NQ++ 
Sbjct: 643  KIYFCNYPFLFDAEAKTTLLETDQAIQMQSAMHEAVSRAVRDIMFGLASANPQHYNQFVI 702

Query: 989  VEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFL 1048
            + VSR++IV+DT+ +L+QY +++ KKPL+V            KF  EEAED GGV++EF 
Sbjct: 703  LNVSRNDIVQDTLTQLSQYDSSELKKPLRV------------KFHNEEAEDVGGVKKEFF 750

Query: 1049 MLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            MLLL+EILDPKYGMFKEYEETR+IWFS D+ ED+ MYFLIG
Sbjct: 751  MLLLREILDPKYGMFKEYEETRTIWFSSDSLEDEVMYFLIG 791



 Score =  199 bits (507), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 137/390 (35%), Positives = 208/390 (53%), Gaps = 44/390 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHC 61
           G  H+LA+N+ G++F+WG +  GQLGL S D  ++  P+ VK L +  +VQ AC      
Sbjct: 92  GSCHTLAVNEWGQLFSWGCNMKGQLGLNSVDC-TERTPRMVKALGTSVIVQIAC------ 144

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVV-QA 120
                  G+ HS+AL + GE+++WG +  GQLG+ S    ++  PKR+  LA+V +   A
Sbjct: 145 -------GIEHSIALTNDGELYSWGSNREGQLGIGS-HTVTEIKPKRIITLAAVPIAFIA 196

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITS------------- 167
           C GY H +V++ SGVV    + N  G       Q  +V     T+ +             
Sbjct: 197 CGGY-HTVVISKSGVVFAWGR-NTFGQLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFS 254

Query: 168 --LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             L   G ++T G   YGQ+G  N    +  P++V  L+   +  I+CG  H+  L  S 
Sbjct: 255 VFLTLDGGVFTCGAGMYGQLGHGNGMNEIL-PRQVMELMGSTVTQISCGKRHTLALVPSR 313

Query: 226 SRLYAFGIGSAVQLDSPKSVHK-TPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYS 284
            R+YA+G+G A QL +  S    TP ++ GPW +S    +   D   S     VV+ I+S
Sbjct: 314 GRVYAWGLGGAGQLGNRASRSATTPLVVLGPW-SSASGSSMKFDLYHSPQIDCVVRHIFS 372

Query: 285 GGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLL 344
           GGDH   T+T   D +  DD R+L   +QIL V  E+L +C+R    + +D  ++ +L+ 
Sbjct: 373 GGDHCFATITAREDNIEPDDCRIL--GSQILTVTEEKLADCQR----VPADSQVNHELMT 426

Query: 345 YLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           YLETVF S  C+N SFL ++ND+H+ C+SK
Sbjct: 427 YLETVFKSQACINASFL-LDNDKHYGCSSK 455



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/102 (60%), Positives = 77/102 (75%), Gaps = 4/102 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+      EYEETR+IWFS D+ ED+ M FLIG LCGLAIYN+ II++PFPLALYKK
Sbjct: 760 PKYGM----FKEYEETRTIWFSSDSLEDEVMYFLIGLLCGLAIYNFIIIDLPFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
           +L E + L D+KD+SP +AKS+Q ILDY E D E+VF + F 
Sbjct: 816 LLGESVGLNDIKDMSPVIAKSMQSILDYNESDFEEVFCLNFE 857



 Score =  114 bits (284), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 116/235 (49%), Gaps = 58/235 (24%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGL-ASVSVVQACAGYSHCLVL 64
           +++ + + G+V++ G + +GQLG E A K+ Q IP    GL A V    AC         
Sbjct: 45  YTVTITNDGQVYSCGNNDYGQLGHEKARKRLQLIP----GLDAFVFKKIAC--------- 91

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  H+LA+N+ G++F+WG +  GQLGL S D  ++  P+ VK L +  +VQ   G 
Sbjct: 92  ----GSCHTLAVNEWGQLFSWGCNMKGQLGLNSVDC-TERTPRMVKALGTSVIVQIACGI 146

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
            H + LT+ G                                      ELY+WG+N  GQ
Sbjct: 147 EHSIALTNDG--------------------------------------ELYSWGSNREGQ 168

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           +GI +   T  KP+R+ +L  +PIA IACG  H+ V+SKS   ++A+G  +  QL
Sbjct: 169 LGIGSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKS-GVVFAWGRNTFGQL 222



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 79/145 (54%), Gaps = 14/145 (9%)

Query: 394 IFGQGFGCVCPTVLGDC--VPKS-------WLYLETVFLSPGCMNGSFLQVENDEHFSCN 444
           I G     V    L DC  VP           YLETVF S  C+N SFL ++ND+H+ C+
Sbjct: 395 ILGSQILTVTEEKLADCQRVPADSQVNHELMTYLETVFKSQACINASFL-LDNDKHYGCS 453

Query: 445 SKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAILASHAHLVKSLWNTPPDAEALRMFL 504
           SKN GVD+      +  I+ +E  +++ L+    I +    L+ S  ++PPD E+LR++L
Sbjct: 454 SKNHGVDLDRAIRLFGIISELENNTIQELIFTCVIES----LMPSFVDSPPDVESLRVYL 509

Query: 505 TLPLYHEFMNPRQHEILHMPFAGAL 529
           TLPLYH F N   +  L +PF  A+
Sbjct: 510 TLPLYHRFANLSNYSSLQIPFCKAV 534


>gi|157132035|ref|XP_001662417.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108871304|gb|EAT35529.1| AAEL012305-PA [Aedes aegypti]
          Length = 648

 Score =  213 bits (542), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 138/344 (40%), Positives = 185/344 (53%), Gaps = 90/344 (26%)

Query: 809  FGITFRNWYLLMSDDYFERLILIFKQCLIYLL--QQPGVVDSTNGD----ITFNRKLSFC 862
            F I  R W+   S +YFERL+  FK  ++Y++  + P VV S NG+    I +   L+  
Sbjct: 140  FTIVSR-WWANQSLEYFERLVENFKHVILYIIHFKFPKVVGS-NGEERQEIRYEPNLAAM 197

Query: 863  LQV---LQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIR 919
            L +   L K+N L  +                        +K+ Y  F++ ++  + DIR
Sbjct: 198  LDIVGILYKINHLERK------------------------QKLPYEQFHIHEIDDLIDIR 233

Query: 920  IDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFN 979
            +DY RW++   N  T   LCNYPFIF+A AK  LL+ DQ +QM  AM       FL    
Sbjct: 234  LDYVRWVTD--NNGTYFSLCNYPFIFNASAKMYLLQTDQGLQMHQAMQDAAHASFLSFLR 291

Query: 980  PHT-LNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
            P   ++Q++ + VSR+NIV+DTIRELAQY+ ND KKPLK+            KF GEEAE
Sbjct: 292  PDVNVSQFIVLNVSRENIVQDTIRELAQYSANDLKKPLKI------------KFHGEEAE 339

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGG+R+EF MLLLK+ILDPKYGMFK YEE+R+IWF+ED F++                 
Sbjct: 340  DAGGLRKEFFMLLLKDILDPKYGMFKTYEESRAIWFTEDFFDN----------------- 382

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                     EET              M+ LIG LCGLAIYN+T+
Sbjct: 383  ---------EET--------------MFALIGILCGLAIYNFTI 403



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 63/96 (65%), Positives = 81/96 (84%), Gaps = 2/96 (2%)

Query: 720 YGITE-YEETRSIWFSEDTFEDQNMCF-LIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
           YG+ + YEE+R+IWF+ED F+++   F LIG LCGLAIYN+TIIN+PFPLALYKK+LDEP
Sbjct: 361 YGMFKTYEESRAIWFTEDFFDNEETMFALIGILCGLAIYNFTIINLPFPLALYKKLLDEP 420

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           + L DL+DLSPT+A+S+Q ILDY E D E+VF +TF
Sbjct: 421 VDLSDLRDLSPTVAQSMQSILDYTESDFEEVFDLTF 456



 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 72/112 (64%), Gaps = 5/112 (4%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           +ETVF S  C NGS+L + N++H  C+S+ PGVDM+  ++ ++ I +IE ++++ ++   
Sbjct: 26  IETVFKSLACFNGSWL-LPNEQHLCCSSRQPGVDMEAAEETFENIRKIEHDTLKQMIWES 84

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
                 + LV S    P D E LR++LTLP+YHEF+N + +  LH PF+ A+
Sbjct: 85  ISSDLISSLVAS----PADVETLRIYLTLPMYHEFINSKNYSKLHSPFSLAV 132



 Score = 43.5 bits (101), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 36/52 (69%), Gaps = 1/52 (1%)

Query: 324 ECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNSKK 375
           E  +++  ++ +ET+D DLL  +ETVF S  C NGS+L + N++H  C+S++
Sbjct: 4   EISKKLCHIQPEETIDIDLLSVIETVFKSLACFNGSWL-LPNEQHLCCSSRQ 54


>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 1063

 Score =  212 bits (540), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 132/337 (39%), Positives = 184/337 (54%), Gaps = 87/337 (25%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQ--PGVVDS-TNGDITFNRKLSFCLQVLQKLNS 871
             W+   + +YFERL+  FK  ++Y+++   P VV   T  +I +   L+  L ++  L  
Sbjct: 560  QWWSNQTKEYFERLLENFKNVVLYIMEFKFPKVVGGDTRQEIRYEPNLAAMLNLMAMLYK 619

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N+                +R        K+ Y  F++ ++  + DIR+DY RW+S   N
Sbjct: 620  INH---------------TLRI------EKLPYEQFHVNEIDDMFDIRLDYVRWVSD-TN 657

Query: 932  GSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAM----NQTNFYLFLQTFNP--HTLNQ 985
            G T   LCNYPF+F+A AKT LL+ DQ +QM  AM    NQT     L  F P   T+ Q
Sbjct: 658  G-TYFSLCNYPFVFNAAAKTLLLQTDQSLQMHQAMQSSVNQTGI---LAMFLPEVQTIAQ 713

Query: 986  YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
            Y+ + V+R+NIV+DTIRELAQYT ND KKP+K+            +F GEEAEDAGGVR+
Sbjct: 714  YIVLNVTRENIVQDTIRELAQYTANDLKKPIKI------------RFHGEEAEDAGGVRK 761

Query: 1046 EFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFK 1105
            EF MLLL++ILDPKYGMFK +E+++SIWF+ED FE+++                      
Sbjct: 762  EFFMLLLRDILDPKYGMFKTFEDSQSIWFTEDYFENEDA--------------------- 800

Query: 1106 EYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                               M+ LIG LCGLAIYN+T+
Sbjct: 801  -------------------MFALIGILCGLAIYNFTI 818



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 192/393 (48%), Gaps = 42/393 (10%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL HSLAL + G++F+WG +  GQLG    D  S   P+ +K +A+ +VVQ   G+SHCL
Sbjct: 97  GLSHSLALTNWGQLFSWGSNATGQLG-HDLDMVSYPAPRMIKSIATKTVVQISCGHSHCL 155

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            LT++            GE+F WG + +GQLGL +  KK  +    VK LA + +     
Sbjct: 156 ALTNS------------GELFAWGANEYGQLGLGTTGKKVPT-ATLVKSLAGIPIAFIAC 202

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN------------- 169
           G +H   ++ SG +    K N  G      + S        T+ SL              
Sbjct: 203 GGNHSFAVSKSGAIFGWGK-NTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVF 261

Query: 170 --SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
               G ++T G   +GQ+G       +  P+ V  L+   I  IACG  H+     S  +
Sbjct: 262 LTQEGGVFTCGLGTFGQLGHGTHGNEIL-PRMVFELMGSKITQIACGRKHTLAFVPSRGK 320

Query: 228 LYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDS--LVSHSGGLVVKKIYS 284
           +Y FG+G   QL    SV   TPQ++ GPW        A  +S  + +    L+V KI+S
Sbjct: 321 VYGFGLGGVGQLGVGSSVSFNTPQIVRGPWSIEKDNNGAKFESFQIDAAQSTLIVGKIFS 380

Query: 285 GGDHSIVTV---TKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           GGD   V++     + +   S DFR+ +P TQI+ +      +  RE+  +++++TLD D
Sbjct: 381 GGDRCFVSLLSDASAGEACGSADFRLYSPDTQIMSLT----ADASRELAAVQAEQTLDMD 436

Query: 342 LLLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           L+  +ETVF S  C N S+L + N EHF C SK
Sbjct: 437 LISLVETVFKSLACFNASWL-LPNYEHFCCTSK 468



 Score =  127 bits (318), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 87/120 (72%), Gaps = 10/120 (8%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCF-LIGTLCGLAIYNYTIINMPFPLALYK 771
           PK G+       +E+++SIWF+ED FE+++  F LIG LCGLAIYN+TIIN+PFPLALYK
Sbjct: 774 PKYGM----FKTFEDSQSIWFTEDYFENEDAMFALIGILCGLAIYNFTIINLPFPLALYK 829

Query: 772 KILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFERLILI 831
           K+L E + ++DL+DLSP +A+S+Q ILDY E DLE+VF +TF       + DYF  +  I
Sbjct: 830 KLLGEEVDIKDLRDLSPMMAQSMQAILDYAESDLEEVFDLTFST-----TRDYFGEMQTI 884



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 114/234 (48%), Gaps = 53/234 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+L L   G+++T G + HGQLG ++ +  ++  P+ +  L +  V Q   G SH     
Sbjct: 47  HTLLLTKDGKLYTCGNNDHGQLGHDTNNLPNKR-PQFISALENYIVTQVSCGLSH----- 100

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL + G++F+WG +  GQLG    D  S   P+ +K +A+ +VVQ   G+S
Sbjct: 101 -------SLALTNWGQLFSWGSNATGQLG-HDLDMVSYPAPRMIKSIATKTVVQISCGHS 152

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL LT+SG                                      EL+ WG NEYGQ+
Sbjct: 153 HCLALTNSG--------------------------------------ELFAWGANEYGQL 174

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           G+  +   V     V+SL  +PIA IACG NHSF +SKS   ++ +G  +  QL
Sbjct: 175 GLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKS-GAIFGWGKNTFGQL 227



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 73/115 (63%), Gaps = 5/115 (4%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           +ETVF S  C N S+L + N EHF C SK+PGVD+   ++ ++ I +IE ++++ L+   
Sbjct: 441 VETVFKSLACFNASWL-LPNYEHFCCTSKHPGVDVGAAEEAFECIRKIEHDTLKQLIWE- 498

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGALPAF 532
              A    L+ SL  +P D E LR++LTLP+YHEF+N + +  LH PF+ A+ + 
Sbjct: 499 ---AISTELLSSLVASPADVETLRVYLTLPMYHEFINAKNYAKLHSPFSQAVQSL 550


>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Megachile
            rotundata]
          Length = 1135

 Score =  212 bits (539), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/282 (43%), Positives = 168/282 (59%), Gaps = 43/282 (15%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            +W++     YFERL+ I K  +++ ++       T+ ++ ++  L    QV+  L  L N
Sbjct: 633  SWWVGSPAHYFERLVRIHKSIVLHYVKTKR--SKTSKEVIWDDTL----QVVLDLLHLLN 686

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +     +                 G KV Y+ F++P+L    DIR +Y RWIS  P  S+
Sbjct: 687  KLNNEGVE----------------GNKVPYSTFHLPELIEYIDIRGNYIRWISEPP--SS 728

Query: 935  RDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF-----YLFLQTFNP--HTLNQYL 987
            R   C+Y F+ DA+AKT LLE DQ IQM+ AMN+         +FL  F+      NQ+L
Sbjct: 729  RKVFCDYSFLLDAQAKTILLETDQAIQMQSAMNEAATRAVMNQMFLDPFSTDLRHHNQFL 788

Query: 988  EVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREF 1047
             + VSR+NIV DT+ EL+ Y ++D KKPL+V            KF GEEAEDAGGV++EF
Sbjct: 789  ILNVSRENIVADTLMELSHYDSSDLKKPLRV------------KFHGEEAEDAGGVKKEF 836

Query: 1048 LMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             MLLLKEILDPKYGMFK+YEE+R IWFSED+ ED+NMYFLIG
Sbjct: 837  FMLLLKEILDPKYGMFKQYEESRIIWFSEDSLEDENMYFLIG 878



 Score =  205 bits (522), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/389 (33%), Positives = 208/389 (53%), Gaps = 39/389 (10%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LA+N+ G++F+WG +  GQLGL S +   + +P  V+ L +  VVQ   G +H L
Sbjct: 169 GAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNL-IECVPHMVRALGTSVVVQVACGINHVL 227

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVV-QAC 121
            LT+             G++++WG ++ GQLGL   D K++  PK +  LA V +    C
Sbjct: 228 ALTNN------------GKLYSWGSNSDGQLGL-GTDVKNEIKPKLISSLAGVPIAFITC 274

Query: 122 AGYSHCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNL--VQDSHTTITS-------- 167
            GY H + ++ SG V      T  + G     ++ +   L  +Q++     +        
Sbjct: 275 GGY-HSMAISKSGAVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVF 333

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G ++T G   YGQ+G  N++  +  P++V  L+   +  I+CG  H+  L  S  R
Sbjct: 334 LTVDGGVFTCGAGMYGQLGHGNTSNEIL-PRQVMELMGSTVTQISCGKRHTLGLVPSRGR 392

Query: 228 LYAFGIGSAVQLDS--PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           +YA+G+G A QL +   +SV  TPQ++HGPW+A   +     +   S     +VK I++G
Sbjct: 393 VYAWGLGGAGQLGNNITRSV-ATPQVVHGPWVAPNGSSVIDFNEFTSCKTNYIVKHIFTG 451

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GDH   TV      V  DD R+L  ++QIL++  E+L  C+R    + S+ ++D +L++Y
Sbjct: 452 GDHCFATVIPRDTNVEPDDCRILQSSSQILEITEEQLMACQR----VPSNSSVDHELMMY 507

Query: 346 LETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           LETVF S  C+ GSFL + ND H+ C+ K
Sbjct: 508 LETVFTSNSCVTGSFL-LNNDAHYGCSIK 535



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 60/96 (62%), Positives = 78/96 (81%), Gaps = 1/96 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  +YEE+R IWFSED+ ED+NM FLIG LCGL IYN+ II++PFPLALYKK+L EP+
Sbjct: 849 YGMFKQYEESRIIWFSEDSLEDENMYFLIGILCGLVIYNFIIIDLPFPLALYKKLLHEPV 908

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
            L D+K++SP LAKS+Q+ILDY E D E++F + F 
Sbjct: 909 GLNDIKEMSPLLAKSMQNILDYEEEDFEEIFCLHFE 944



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 58/227 (25%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGL-ASVSVVQACAGYSHCLVLTSTTGLWH 72
           G+V++ G + +GQLG E   K+ Q IP    GL A V    AC  +             H
Sbjct: 130 GQVYSCGNNDYGQLGHEKGRKRLQLIP----GLDAFVFKKVACGAH-------------H 172

Query: 73  SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 132
           +LA+N+ G++F+WG +  GQLGL S +   + +P  V+ L +  VVQ   G +H L LT+
Sbjct: 173 TLAVNEWGQLFSWGSNAEGQLGLNSKN-LIECVPHMVRALGTSVVVQVACGINHVLALTN 231

Query: 133 SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNT 192
           +                                      G+LY+WG+N  GQ+G+     
Sbjct: 232 N--------------------------------------GKLYSWGSNSDGQLGLGTDVK 253

Query: 193 TVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
              KP+ + SL  +PIA I CG  HS  +SKS   ++ +G  +  QL
Sbjct: 254 NEIKPKLISSLAGVPIAFITCGGYHSMAISKS-GAVFGWGKNTFGQL 299



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 3/116 (2%)

Query: 416 LYLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVS 475
           +YLETVF S  C+ GSFL + ND H+ C+ K+ GVD+      +  I  ++  +++ L+ 
Sbjct: 506 MYLETVFTSNSCVTGSFL-LNNDAHYGCSIKHHGVDLDRASRLFGIIKELDNNTIQKLIF 564

Query: 476 NLAILASHAHLVKSLWNTPPDA--EALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
                +       S  NT      E+LR++L LPLYH F NP   ++LH PF  A+
Sbjct: 565 TCITESLIPSFTSSNCNTIKTVCPESLRIYLILPLYHGFANPLNCDVLHSPFCKAI 620



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 17/186 (9%)

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTH 140
           +F WG   HG+LGL   + ++  +P+ +    +  + Q   G ++ +++T  G V +C +
Sbjct: 78  MFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDGQVYSCGN 137

Query: 141 KENG-CGSDPSQG-----------VQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGIN 188
            + G  G +  +            V   +   +H T+ ++N  G+L++WG+N  GQ+G+N
Sbjct: 138 NDYGQLGHEKGRKRLQLIPGLDAFVFKKVACGAHHTL-AVNEWGQLFSWGSNAEGQLGLN 196

Query: 189 NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK- 247
           + N     P  V +L    +  +ACG NH   L+ +  +LY++G  S  QL     V   
Sbjct: 197 SKNLIECVPHMVRALGTSVVVQVACGINHVLALTNN-GKLYSWGSNSDGQLGLGTDVKNE 255

Query: 248 -TPQLI 252
             P+LI
Sbjct: 256 IKPKLI 261


>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
          Length = 1054

 Score =  206 bits (523), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 140/392 (35%), Positives = 210/392 (53%), Gaps = 44/392 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQ-ACAGYS 59
           G  H+L +N+ G++F+WG +  GQLGL   D+ S +I  P+ VK L +  +VQ AC    
Sbjct: 92  GSSHTLVVNEWGQLFSWGSNVEGQLGL---DRVSATIREPRMVKTLGTKIIVQIAC---- 144

Query: 60  HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVV- 118
                    GL HS+AL + GE++ WG ++ GQLGL S D K +  PK V  LA+V +  
Sbjct: 145 ---------GLKHSIALTNNGELYAWGSNSDGQLGLGS-DTKMELKPKLVHSLAAVPIAF 194

Query: 119 QACAGYSHCLVLTSSGVVTC----THKENGCGSDPSQGV--QSNLVQDSHTTITS----- 167
            AC GY H +V++ SG V      T  + G     ++ V  Q   +++S     +     
Sbjct: 195 VACGGY-HTIVISKSGAVFAWGRNTFGQLGLSDIQNRNVPCQLRTLRNSRVCYAACGEEF 253

Query: 168 ---LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              L   G ++T G   YGQ+G  N  + +  P+++  L+   +  I+CG  H+  L  S
Sbjct: 254 SVFLTMDGGVFTCGAGMYGQLGHGNKTSEIL-PRQIMELMGSTVTQISCGRRHTLALVPS 312

Query: 225 VSRLYAFGIGSAVQLDSPKSVHKT-PQLIHGPWIASPVAMTAGEDSLVS-HSGGLVVKKI 282
             R+YA+G+G A QL +  + + T PQ++ GPW++   +     DS  S      VVK I
Sbjct: 313 RGRVYAWGLGGAGQLGNRIAQNSTTPQVVFGPWVSPSGSSMINHDSHDSPKPTDCVVKHI 372

Query: 283 YSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDL 342
           +SGGDH    VT   D +  DD R+L   +QIL V  E+L  C+R    + ++  +D +L
Sbjct: 373 FSGGDHCFAIVTLREDNIEPDDCRILGSTSQILTVTEEQLAACQR----VPAESLVDHEL 428

Query: 343 LLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           + YLETVF S  C+NGSFL+  ND H+ C+ K
Sbjct: 429 ITYLETVFRSQACINGSFLRA-NDAHYGCSRK 459



 Score =  205 bits (521), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/284 (40%), Positives = 165/284 (58%), Gaps = 48/284 (16%)

Query: 816  WYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNE 875
            W+      YFERL+ I+K  +++ ++Q     + +  + +N  L   L++L+ L  LN  
Sbjct: 552  WWNNAPAHYFERLVRIYKYVVLHFVKQ----STADKSVPWNPSLKCALELLRLLYKLN-- 605

Query: 876  TLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWI--SGRPNGS 933
                                     +V+Y  F++P+L    DIR +Y RW+     PN  
Sbjct: 606  -------------------FADDAMRVSYETFHLPNLMQFIDIRTEYLRWLMEDSSPN-Y 645

Query: 934  TRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTN--------FYLFLQTFNPHTLNQ 985
             R + CNYPF+FDA+AKT LLE DQ +QM+ AMN+          F++   + +    NQ
Sbjct: 646  PRIYFCNYPFLFDAEAKTVLLETDQAVQMQSAMNEAASRAIRHILFHINTGSVDARQHNQ 705

Query: 986  YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
            ++ + VSR+NIV DT+ +L+QY   D KKPL++            KF  EEAEDAGGV++
Sbjct: 706  FVTLNVSRENIVTDTLTQLSQYDPYDLKKPLRI------------KFHDEEAEDAGGVKK 753

Query: 1046 EFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            EF MLLL+E+LDPKYGMFK+YEETR+IWF ED+FED+ MYFLIG
Sbjct: 754  EFFMLLLREVLDPKYGMFKQYEETRTIWFIEDSFEDEVMYFLIG 797



 Score =  136 bits (343), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 65/101 (64%), Positives = 78/101 (77%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+      +YEETR+IWF ED+FED+ M FLIG LCGLAIYN+ IIN+PFPLALYKK
Sbjct: 766 PKYGM----FKQYEETRTIWFIEDSFEDEVMYFLIGLLCGLAIYNFIIINLPFPLALYKK 821

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L E + L D+KDLSP +AKS+Q ILDY E D EDVF + F
Sbjct: 822 LLGESVGLNDVKDLSPVIAKSMQSILDYNELDFEDVFSLNF 862



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 113/236 (47%), Gaps = 60/236 (25%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +++A+   G+V++ G + HGQLG E   K+ Q I     G+  ++  +A  G SH LV+ 
Sbjct: 45  YTIAVTKEGQVYSCGNNDHGQLGQEKGRKRLQLI----SGIDPLAFRKAACGSSHTLVV- 99

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAG 123
                      N+ G++F+WG +  GQLGL   D+ S +I  P+ VK L +  +VQ   G
Sbjct: 100 -----------NEWGQLFSWGSNVEGQLGL---DRVSATIREPRMVKTLGTKIIVQIACG 145

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
             H + LT++G                                      ELY WG+N  G
Sbjct: 146 LKHSIALTNNG--------------------------------------ELYAWGSNSDG 167

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           Q+G+ +      KP+ V SL  +PIA +ACG  H+ V+SKS   ++A+G  +  QL
Sbjct: 168 QLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKS-GAVFAWGRNTFGQL 222



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/113 (42%), Positives = 72/113 (63%), Gaps = 5/113 (4%)

Query: 417 YLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSN 476
           YLETVF S  C+NGSFL+  ND H+ C+ K+ GVD+      Y  I+++E ++++ L+  
Sbjct: 431 YLETVFRSQACINGSFLRA-NDAHYGCSRKHHGVDIDSAIKLYAIISKLENKTIQELIFT 489

Query: 477 LAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
               +    L+ SL  +PPD E+LR++LTLPLYH F++P  H  L  PF+ A+
Sbjct: 490 CITDS----LLPSLATSPPDVESLRVYLTLPLYHGFVDPINHNSLQKPFSQAV 538


>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
 gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
 gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
          Length = 1062

 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 143/393 (36%), Positives = 211/393 (53%), Gaps = 48/393 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+D G+V +WG +  GQLG  + DK+   +PK V+ L + +VVQ   G +H L
Sbjct: 103 GSRHSLALSDWGQVLSWGDNDCGQLG-HATDKEIVQLPKVVRQLVTKTVVQIACGNNHSL 161

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQAC 121
            LTS            CGE+++WG + +GQLG+ S +  +  + P R+  L  + +    
Sbjct: 162 ALTS------------CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIA 209

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCG----------SDPSQ-------GVQSNLVQDSHTT 164
            G +H  +++ SG V    + N CG          S P+Q       GV+     D  + 
Sbjct: 210 CGGNHSFLISKSGAVFGWGRNN-CGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSV 268

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              L + G ++T G   YGQ+G   S+  +  P+ V  L+   I  +ACG  H+  L  S
Sbjct: 269 F--LTNEGGVFTCGAGAYGQLGHGFSSNEML-PRMVMELMGSTITQVACGNRHTLALVPS 325

Query: 225 VSRLYAFGIGSAVQLD--SPKSVHKTPQLIHGPWIA-SPVAMTAGEDSLVSHSGGLVVKK 281
             R+YAFG+GS+ QL   S KS+   PQ++ GPW++ S  A+    DS VS    LV+++
Sbjct: 326 RGRVYAFGLGSSGQLGTRSTKSL-MLPQVVIGPWVSPSGSALLQSNDSQVS----LVIRQ 380

Query: 282 IYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           I+SGGD SIVT T   D V  +DFR  NP +QIL +  E  K+C +  + L+S    D D
Sbjct: 381 IFSGGDQSIVTTTLFVDKVPPEDFRNYNPKSQILTLTAEVTKQCAQCKQGLQS----DMD 436

Query: 342 LLLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           LL  +E +F S  C NGSFL +++D HF C+ +
Sbjct: 437 LLSSIELIFRSQACWNGSFL-LDHDRHFGCSVR 468



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/335 (34%), Positives = 171/335 (51%), Gaps = 86/335 (25%)

Query: 816  WYLLMSDDYFERLILIFKQCLIYLLQ-QPGVVDSTNGD------ITFNRKLSFCLQVLQK 868
            W      +YFE L+  F   +I+++  + G+  ++         + +N +L   L++++ 
Sbjct: 561  WLAQTPAEYFEHLVQNFLHVVIHIISFKMGLAAASPSAERRQQLLPYNTELEIILKLMKT 620

Query: 869  LNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISG 928
            L  +NNE                         ++ Y  FY PDL+   D++ +Y +WI  
Sbjct: 621  LCQINNER----------------------HDRLNYQIFYWPDLSDYADVQQEYVKWIMA 658

Query: 929  RPNGSTRDF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYL 987
                + RDF +CNY FIFD  AKT LL+ DQ +QM  AM       F        ++Q++
Sbjct: 659  ---DTARDFNICNYSFIFDQSAKTALLQADQALQMHSAMANAATMAFSFFNYGMPISQFI 715

Query: 988  EVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREF 1047
             + V+R+N+V+D++REL  Y+ +D KKPLK+            KF GEEAEDAGGVR+EF
Sbjct: 716  VLNVTRENLVQDSLRELQHYSQSDLKKPLKI------------KFHGEEAEDAGGVRKEF 763

Query: 1048 LMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEY 1107
             MLLLK++LDPKYGMFKEYE++R +WF++ TFE +NMYFL                    
Sbjct: 764  FMLLLKDLLDPKYGMFKEYEQSRLLWFADLTFETENMYFL-------------------- 803

Query: 1108 EETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                 IG LCGLAIYN+T+
Sbjct: 804  ---------------------IGVLCGLAIYNFTI 817



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/96 (58%), Positives = 76/96 (79%), Gaps = 1/96 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  EYE++R +WF++ TFE +NM FLIG LCGLAIYN+TIIN+PFPLAL+KK+L +P+
Sbjct: 776 YGMFKEYEQSRLLWFADLTFETENMYFLIGVLCGLAIYNFTIINLPFPLALFKKLLGKPV 835

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
            L DL+ LSP  A S+Q +LDY+  D ++VF +TF 
Sbjct: 836 DLSDLRQLSPPEANSMQSLLDYQGDDFKEVFDLTFE 871



 Score =  116 bits (291), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 119/270 (44%), Gaps = 85/270 (31%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLW--- 71
           E++ WG  +HGQLGL   + +    P ++      +V Q   G+ H L LT+T  ++   
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 72  ----------------------------------------HSLALNDCGEVFTWGGDTHG 91
                                                   HSLAL+D G+V +WG +  G
Sbjct: 66  SNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCG 125

Query: 92  QLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQ 151
           QLG  + DK+   +PK V+ L + +VVQ   G +H L LTS                   
Sbjct: 126 QLG-HATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSC------------------ 166

Query: 152 GVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN--TTVTKPQRVESLVNLPIA 209
                               GELY+WG+N YGQ+G+N+ N  T    P R+ +L+ +P+A
Sbjct: 167 --------------------GELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLA 206

Query: 210 LIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
            IACG NHSF++SKS   ++ +G  +  QL
Sbjct: 207 AIACGGNHSFLISKS-GAVFGWGRNNCGQL 235



 Score = 94.0 bits (232), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 73/113 (64%), Gaps = 7/113 (6%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLV-SN 476
           +E +F S  C NGSFL +++D HF C+ +N G+D++  Q  +D +  +E ES+R ++  N
Sbjct: 441 IELIFRSQACWNGSFL-LDHDRHFGCSVRNHGLDLKAAQLAFDNLRAVENESIRQVIWDN 499

Query: 477 LAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +        LV SL  +P D E++R++L LPLYHEF+N + ++ L +PFA A+
Sbjct: 500 IT-----KELVGSLVCSPADVESMRLYLLLPLYHEFVNSKHYKSLQVPFANAI 547



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 106/239 (44%), Gaps = 46/239 (19%)

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
           E++ WG  +HGQLGL   + +    P ++      +V Q   G+ H L LT++G V    
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVY--- 62

Query: 141 KENGCGSDPSQGVQSNL---------------VQD--------SHTTITSLNSPGELYTW 177
               CGS+    +  +L               +QD              +L+  G++ +W
Sbjct: 63  ---ACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSW 119

Query: 178 GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
           G+N+ GQ+G       V  P+ V  LV   +  IACG NHS  L+ S   LY++G     
Sbjct: 120 GDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT-SCGELYSWGSNIYG 178

Query: 238 QLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKS 296
           QL     V+    L H  +   P+ +T    +L+    G+ +  I  GG+HS + ++KS
Sbjct: 179 QL----GVNSPNDLTHCNY---PLRLT----TLL----GIPLAAIACGGNHSFL-ISKS 221


>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
 gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
 gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
 gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
          Length = 1058

 Score =  203 bits (517), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 143/393 (36%), Positives = 211/393 (53%), Gaps = 48/393 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+D G+V +WG +  GQLG  + DK+   +PK V+ L + +VVQ   G +H L
Sbjct: 98  GSRHSLALSDWGQVLSWGDNDCGQLG-HATDKEIVQLPKVVRQLVTKTVVQIACGNNHSL 156

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQAC 121
            LTS            CGE+++WG + +GQLG+ S +  +  + P R+  L  + +    
Sbjct: 157 ALTS------------CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIA 204

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCG----------SDPSQ-------GVQSNLVQDSHTT 164
            G +H  +++ SG V    + N CG          S P+Q       GV+     D  + 
Sbjct: 205 CGGNHSFLISKSGAVFGWGRNN-CGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSV 263

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              L + G ++T G   YGQ+G   S+  +  P+ V  L+   I  +ACG  H+  L  S
Sbjct: 264 F--LTNEGGVFTCGAGAYGQLGHGFSSNEML-PRMVMELMGSTITQVACGNRHTLALVPS 320

Query: 225 VSRLYAFGIGSAVQLD--SPKSVHKTPQLIHGPWIA-SPVAMTAGEDSLVSHSGGLVVKK 281
             R+YAFG+GS+ QL   S KS+   PQ++ GPW++ S  A+    DS VS    LV+++
Sbjct: 321 RGRVYAFGLGSSGQLGTRSTKSL-MLPQVVIGPWVSPSGSALLQSNDSQVS----LVIRQ 375

Query: 282 IYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           I+SGGD SIVT T   D V  +DFR  NP +QIL +  E  K+C +  + L+S    D D
Sbjct: 376 IFSGGDQSIVTTTLFVDKVPPEDFRNYNPKSQILTLTAEVTKQCAQCKQGLQS----DMD 431

Query: 342 LLLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           LL  +E +F S  C NGSFL +++D HF C+ +
Sbjct: 432 LLSSIELIFRSQACWNGSFL-LDHDRHFGCSVR 463



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/339 (34%), Positives = 172/339 (50%), Gaps = 87/339 (25%)

Query: 813  FRNWYLLMSDDYFERLILIFKQCLIYLLQ-QPGVVDSTNGD------ITFNRKLSFCLQV 865
               W      +YFE L+  F   +I+++  + G+  ++         + +N +L   L++
Sbjct: 553  LNKWLAQTPAEYFEHLVQNFLHVVIHIISFKMGLAAASPSAERRQQLLPYNTELEIILKL 612

Query: 866  LQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRW 925
            ++ L  +NNE                         ++ Y  FY PDL+   D++ +Y +W
Sbjct: 613  MKTLCQINNER----------------------HDRLNYQIFYWPDLSDYADVQQEYVKW 650

Query: 926  ISGRPNGSTRDF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFN-PHTL 983
            I      + RDF +CNY FIFD  AKT LL+ DQ +QM  AM           FN    +
Sbjct: 651  IMA---DTARDFNICNYSFIFDQSAKTALLQADQALQMHSAMANAATMQAFSFFNYGMPI 707

Query: 984  NQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGV 1043
            +Q++ + V+R+N+V+D++REL  Y+ +D KKPLK+            KF GEEAEDAGGV
Sbjct: 708  SQFIVLNVTRENLVQDSLRELQHYSQSDLKKPLKI------------KFHGEEAEDAGGV 755

Query: 1044 RREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSM 1103
            R+EF MLLLK++LDPKYGMFKEYE++R +WF++ TFE +NMYFL                
Sbjct: 756  RKEFFMLLLKDLLDPKYGMFKEYEQSRLLWFADLTFETENMYFL---------------- 799

Query: 1104 FKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                     IG LCGLAIYN+T+
Sbjct: 800  -------------------------IGVLCGLAIYNFTI 813



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/96 (58%), Positives = 76/96 (79%), Gaps = 1/96 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  EYE++R +WF++ TFE +NM FLIG LCGLAIYN+TIIN+PFPLAL+KK+L +P+
Sbjct: 772 YGMFKEYEQSRLLWFADLTFETENMYFLIGVLCGLAIYNFTIINLPFPLALFKKLLGKPV 831

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
            L DL+ LSP  A S+Q +LDY+  D ++VF +TF 
Sbjct: 832 DLSDLRQLSPPEANSMQSLLDYQGDDFKEVFDLTFE 867



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 119/265 (44%), Gaps = 80/265 (30%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLW--- 71
           E++ WG  +HGQLGL   + +    P ++      +V Q   G+ H L LT+T  ++   
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 72  -----------------------------------HSLALNDCGEVFTWGGDTHGQLGLE 96
                                              HSLAL+D G+V +WG +  GQLG  
Sbjct: 66  SNDYSQLGHDLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLG-H 124

Query: 97  SADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN 156
           + DK+   +PK V+ L + +VVQ   G +H L LTS                        
Sbjct: 125 ATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSC----------------------- 161

Query: 157 LVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN--TTVTKPQRVESLVNLPIALIACG 214
                          GELY+WG+N YGQ+G+N+ N  T    P R+ +L+ +P+A IACG
Sbjct: 162 ---------------GELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACG 206

Query: 215 ANHSFVLSKSVSRLYAFGIGSAVQL 239
            NHSF++SKS   ++ +G  +  QL
Sbjct: 207 GNHSFLISKS-GAVFGWGRNNCGQL 230



 Score = 94.0 bits (232), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 73/113 (64%), Gaps = 7/113 (6%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLV-SN 476
           +E +F S  C NGSFL +++D HF C+ +N G+D++  Q  +D +  +E ES+R ++  N
Sbjct: 436 IELIFRSQACWNGSFL-LDHDRHFGCSVRNHGLDLKAAQLAFDNLRAVENESIRQVIWDN 494

Query: 477 LAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +        LV SL  +P D E++R++L LPLYHEF+N + ++ L +PFA A+
Sbjct: 495 IT-----KELVGSLVCSPADVESMRLYLLLPLYHEFVNSKHYKSLQVPFANAI 542



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 41/234 (17%)

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
           E++ WG  +HGQLGL   + +    P ++      +V Q   G+ H L LT++G V    
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVY--- 62

Query: 141 KENGCGSDPSQGVQSNL----------VQD--------SHTTITSLNSPGELYTWGNNEY 182
               CGS+    +  +L          +QD              +L+  G++ +WG+N+ 
Sbjct: 63  ---ACGSNDYSQLGHDLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDC 119

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G       V  P+ V  LV   +  IACG NHS  L+ S   LY++G     QL   
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT-SCGELYSWGSNIYGQL--- 175

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKS 296
             V+    L H  +   P+ +T    +L+    G+ +  I  GG+HS + ++KS
Sbjct: 176 -GVNSPNDLTHCNY---PLRLT----TLL----GIPLAAIACGGNHSFL-ISKS 216


>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
          Length = 1058

 Score =  203 bits (517), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 143/393 (36%), Positives = 211/393 (53%), Gaps = 48/393 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+D G+V +WG +  GQLG  + DK+   +PK V+ L + +VVQ   G +H L
Sbjct: 98  GSRHSLALSDWGQVLSWGDNDCGQLG-HATDKEIVQLPKVVRQLVTKTVVQIACGNNHSL 156

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQAC 121
            LTS            CGE+++WG + +GQLG+ S +  +  + P R+  L  + +    
Sbjct: 157 ALTS------------CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIA 204

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCG----------SDPSQ-------GVQSNLVQDSHTT 164
            G +H  +++ SG V    + N CG          S P+Q       GV+     D  + 
Sbjct: 205 CGGNHSFLISKSGAVFGWGRNN-CGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSV 263

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              L + G ++T G   YGQ+G   S+  +  P+ V  L+   I  +ACG  H+  L  S
Sbjct: 264 F--LTNEGGVFTCGAGAYGQLGHGFSSNEML-PRMVMELMGSTITQVACGNRHTLALVPS 320

Query: 225 VSRLYAFGIGSAVQLD--SPKSVHKTPQLIHGPWIA-SPVAMTAGEDSLVSHSGGLVVKK 281
             R+YAFG+GS+ QL   S KS+   PQ++ GPW++ S  A+    DS VS    LV+++
Sbjct: 321 RGRVYAFGLGSSGQLGTRSTKSL-MLPQVVIGPWVSPSGSALLQSNDSQVS----LVIRQ 375

Query: 282 IYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           I+SGGD SIVT T   D V  +DFR  NP +QIL +  E  K+C +  + L+S    D D
Sbjct: 376 IFSGGDQSIVTTTLFVDKVPPEDFRNYNPKSQILTLTAEVTKQCAQCKQGLQS----DMD 431

Query: 342 LLLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           LL  +E +F S  C NGSFL +++D HF C+ +
Sbjct: 432 LLSSIELIFRSQACWNGSFL-LDHDRHFGCSVR 463



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/339 (34%), Positives = 172/339 (50%), Gaps = 87/339 (25%)

Query: 813  FRNWYLLMSDDYFERLILIFKQCLIYLLQ-QPGVVDSTNGD------ITFNRKLSFCLQV 865
               W      +YFE L+  F   +I+++  + G+  ++         + +N +L   L++
Sbjct: 553  LNKWLAQTPAEYFEHLVQNFLHVVIHIISFKMGLAAASPSAERRQQLLPYNTELEIILKL 612

Query: 866  LQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRW 925
            ++ L  +NNE                         ++ Y  FY PDL+   D++ +Y +W
Sbjct: 613  MKTLCQINNER----------------------HDRLNYQIFYWPDLSDYADVQQEYVKW 650

Query: 926  ISGRPNGSTRDF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFN-PHTL 983
            I      + RDF +CNY FIFD  AKT LL+ DQ +QM  AM           FN    +
Sbjct: 651  IMA---DTARDFNICNYSFIFDQSAKTALLQADQALQMHSAMANAATMQAFSFFNYGMPI 707

Query: 984  NQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGV 1043
            +Q++ + V+R+N+V+D++REL  Y+ +D KKPLK+            KF GEEAEDAGGV
Sbjct: 708  SQFIVLNVTRENLVQDSLRELQHYSQSDLKKPLKI------------KFHGEEAEDAGGV 755

Query: 1044 RREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSM 1103
            R+EF MLLLK++LDPKYGMFKEYE++R +WF++ TFE +NMYFL                
Sbjct: 756  RKEFFMLLLKDLLDPKYGMFKEYEQSRLLWFADLTFETENMYFL---------------- 799

Query: 1104 FKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                     IG LCGLAIYN+T+
Sbjct: 800  -------------------------IGVLCGLAIYNFTI 813



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/96 (58%), Positives = 76/96 (79%), Gaps = 1/96 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  EYE++R +WF++ TFE +NM FLIG LCGLAIYN+TIIN+PFPLAL+KK+L +P+
Sbjct: 772 YGMFKEYEQSRLLWFADLTFETENMYFLIGVLCGLAIYNFTIINLPFPLALFKKLLGKPV 831

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
            L DL+ LSP  A S+Q +LDY+  D ++VF +TF 
Sbjct: 832 DLSDLRQLSPPEANSMQSLLDYQGDDFKEVFDLTFE 867



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 119/265 (44%), Gaps = 80/265 (30%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLW--- 71
           E++ WG  +HGQLGL   + +    P ++      +V Q   G+ H L LT+T  ++   
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 72  -----------------------------------HSLALNDCGEVFTWGGDTHGQLGLE 96
                                              HSLAL+D G+V +WG +  GQLG  
Sbjct: 66  SNDYSQLGHDLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLG-H 124

Query: 97  SADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN 156
           + DK+   +PK V+ L + +VVQ   G +H L LTS                        
Sbjct: 125 ATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSC----------------------- 161

Query: 157 LVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN--TTVTKPQRVESLVNLPIALIACG 214
                          GELY+WG+N YGQ+G+N+ N  T    P R+ +L+ +P+A IACG
Sbjct: 162 ---------------GELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACG 206

Query: 215 ANHSFVLSKSVSRLYAFGIGSAVQL 239
            NHSF++SKS   ++ +G  +  QL
Sbjct: 207 GNHSFLISKS-GAVFGWGRNNCGQL 230



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 73/113 (64%), Gaps = 7/113 (6%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLV-SN 476
           +E +F S  C NGSFL +++D HF C+ ++ G+D++  Q  +D +  +E ES+R ++  N
Sbjct: 436 IELIFRSQACWNGSFL-LDHDRHFGCSVRDHGLDLKAAQLAFDNLRAVENESIRQVIWDN 494

Query: 477 LAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +        LV SL  +P D E++R++L LPLYHEF+N + ++ L +PFA A+
Sbjct: 495 IT-----KELVGSLVCSPADVESMRLYLLLPLYHEFVNSKHYKSLQVPFANAI 542



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 41/234 (17%)

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
           E++ WG  +HGQLGL   + +    P ++      +V Q   G+ H L LT++G V    
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVY--- 62

Query: 141 KENGCGSDPSQGVQSNL----------VQD--------SHTTITSLNSPGELYTWGNNEY 182
               CGS+    +  +L          +QD              +L+  G++ +WG+N+ 
Sbjct: 63  ---ACGSNDYSQLGHDLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDC 119

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G       V  P+ V  LV   +  IACG NHS  L+ S   LY++G     QL   
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT-SCGELYSWGSNIYGQL--- 175

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKS 296
             V+    L H  +   P+ +T    +L+    G+ +  I  GG+HS + ++KS
Sbjct: 176 -GVNSPNDLTHCNY---PLRLT----TLL----GIPLAAIACGGNHSFL-ISKS 216


>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
 gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
          Length = 1058

 Score =  203 bits (517), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 141/393 (35%), Positives = 210/393 (53%), Gaps = 48/393 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+D G+V +WG +  GQLG  + DK+   +PK V+ L S +VVQ   G +H L
Sbjct: 98  GSRHSLALSDWGQVLSWGDNDCGQLG-HATDKEIMQLPKVVRQLVSKTVVQIACGNNHSL 156

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLES-ADKKSQSIPKRVKGLASVSVVQAC 121
            LTS            CGE+++WG + +GQLG+ S  D    + P R+  L  + +    
Sbjct: 157 ALTS------------CGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIA 204

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCG----------SDPSQ-------GVQSNLVQDSHTT 164
            G +H  +++ SG V    + N CG          + P+Q       GV+     D  + 
Sbjct: 205 CGGNHSFLISKSGAVFGWGR-NNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSV 263

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              L + G ++T G   YGQ+G   S+  +  P+ V  L+   I  +ACG  H+  L  S
Sbjct: 264 F--LTNEGGVFTCGAGAYGQLGHGFSSNEML-PRMVMELMGSTITQVACGNRHTLALVPS 320

Query: 225 VSRLYAFGIGSAVQLD--SPKSVHKTPQLIHGPWIA-SPVAMTAGEDSLVSHSGGLVVKK 281
             R+YAFG+GS+ QL   S KS+   PQ++ GPW++ S  A+   +D+ VS    +V+++
Sbjct: 321 RGRVYAFGLGSSGQLGTRSTKSL-MLPQVVIGPWVSPSGSALLQSKDAKVS----VVIRQ 375

Query: 282 IYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           I+SGGD SIVT T   + V  +DFR   P +QIL +  E  K+C     Q K D+  D D
Sbjct: 376 IFSGGDQSIVTTTLFMEKVPPEDFRNYKPKSQILSLTAEVTKQC----AQCKQDDQSDMD 431

Query: 342 LLLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           LL  +E +F S  C NGSFL +++D HF C+++
Sbjct: 432 LLSSIELIFKSQACWNGSFL-LDHDRHFGCSAR 463



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/336 (34%), Positives = 171/336 (50%), Gaps = 85/336 (25%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQ-QPGVV------DSTNGDITFNRKLSFCLQVLQ 867
             W      +YFERL+      +++++  + G+V      +     + +N +L   L+++Q
Sbjct: 555  KWLAQTPAEYFERLVQNCLHVVVHIISFKMGLVAISPSAERRERFLPYNTELEVILKLMQ 614

Query: 868  KLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWIS 927
             L  +NN                +R        ++ Y +FY PDL    D+  +Y +WI 
Sbjct: 615  TLFQINN----------------LRDD------RLDYQSFYWPDLLDYVDVLQEYVKWI- 651

Query: 928  GRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFN-PHTLNQY 986
               + ++   +CNY FIFD  AKT LL+ DQ +QM  AM           FN    ++Q+
Sbjct: 652  -MVDTASEFSICNYSFIFDQSAKTALLQADQALQMHSAMANAATMQAFSLFNYGMPISQF 710

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            + + V+R+N+V+D++REL +Y+  D KKPLK+            KF+ EEAEDAGGVR+E
Sbjct: 711  IVLNVTRENLVQDSLRELQRYSQRDLKKPLKI------------KFQDEEAEDAGGVRKE 758

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F MLLLK++LDPKYGMFKEYE++R +WF++ TFE +NMYFL                   
Sbjct: 759  FFMLLLKDLLDPKYGMFKEYEDSRLLWFADLTFETENMYFL------------------- 799

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG LCGLAIYN+T+
Sbjct: 800  ----------------------IGVLCGLAIYNFTI 813



 Score =  126 bits (317), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 58/96 (60%), Positives = 77/96 (80%), Gaps = 1/96 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  EYE++R +WF++ TFE +NM FLIG LCGLAIYN+TIIN+PFPLALYKK+LD+P+
Sbjct: 772 YGMFKEYEDSRLLWFADLTFETENMYFLIGVLCGLAIYNFTIINLPFPLALYKKLLDKPV 831

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
            L DL+ LSP  A S+Q +LDY+  D ++VF +TF 
Sbjct: 832 DLSDLRQLSPPEANSMQSLLDYQGEDFKEVFDLTFE 867



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 117/265 (44%), Gaps = 80/265 (30%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS-------- 66
           E++ WG  +HGQLGL   + +    P ++      +V Q   G+ H L LT+        
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACG 65

Query: 67  ------------------------------TTGLWHSLALNDCGEVFTWGGDTHGQLGLE 96
                                         + G  HSLAL+D G+V +WG +  GQLG  
Sbjct: 66  SNDHSQLGHDLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLG-H 124

Query: 97  SADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN 156
           + DK+   +PK V+ L S +VVQ   G +H L LTS                        
Sbjct: 125 ATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSC----------------------- 161

Query: 157 LVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN--TTVTKPQRVESLVNLPIALIACG 214
                          GELY+WG+N YGQ+G+N+    T    P R+ +L+ +P+A IACG
Sbjct: 162 ---------------GELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACG 206

Query: 215 ANHSFVLSKSVSRLYAFGIGSAVQL 239
            NHSF++SKS   ++ +G  +  QL
Sbjct: 207 GNHSFLISKS-GAVFGWGRNNCGQL 230



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 75/113 (66%), Gaps = 7/113 (6%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLV-SN 476
           +E +F S  C NGSFL +++D HF C+++N G+D++  Q  +D +  +E ES++ ++  N
Sbjct: 436 IELIFKSQACWNGSFL-LDHDRHFGCSARNHGLDLKAAQLAFDNLRVVENESIKQVIWDN 494

Query: 477 LAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +        LV SL N+P D E++R++L LPLYHEF+N + ++ L +PFA A+
Sbjct: 495 IT-----NELVGSLVNSPADVESMRLYLLLPLYHEFVNSKHYKSLQIPFANAI 542



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 31/221 (14%)

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
           E++ WG  +HGQLGL   + +    P ++      +V Q   G+ H L LT++G V    
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVY--- 62

Query: 141 KENGCGSDPSQGVQSNL----------VQD--------SHTTITSLNSPGELYTWGNNEY 182
               CGS+    +  +L          +QD              +L+  G++ +WG+N+ 
Sbjct: 63  ---ACGSNDHSQLGHDLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDC 119

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG--IGSAVQLD 240
           GQ+G       +  P+ V  LV+  +  IACG NHS  L+ S   LY++G  I   + ++
Sbjct: 120 GQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALT-SCGELYSWGSNIYGQLGVN 178

Query: 241 SPKSV-HKTPQLIHGPWIASPVAMTA--GEDS-LVSHSGGL 277
           SPK + H    L     +  P+A  A  G  S L+S SG +
Sbjct: 179 SPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV 219


>gi|328704352|ref|XP_003242465.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform 2
            [Acyrthosiphon pisum]
          Length = 893

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/285 (43%), Positives = 165/285 (57%), Gaps = 36/285 (12%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
            T   W   M   YF  L++++K   I    Q     ++     +++ L     +L KLN 
Sbjct: 560  TIEFWISSMPVVYFNTLLMVYKNVFI---DQLNTNTNSTEQKCWDKALIVAASMLAKLNK 616

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            LN+       +  G  V         G  KV YT+FY+P L+   DI  DY +W+    N
Sbjct: 617  LNS-------NLNGHQVK-------KGQLKVPYTSFYIPQLSDKIDIPSDYMKWMRADNN 662

Query: 932  G-STRDF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTF----NPHTL-N 984
            G   +DF  CNYPF+F+A+AKT LL++DQ++QM+ AM       F Q      N H L N
Sbjct: 663  GIKYQDFYFCNYPFLFNAEAKTILLQVDQKVQMQQAMQAAATRAFTQMLFLDVNQHNLAN 722

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
            Q++E+ VSR+N+V DTIREL+ YT +D+KKPLKV            KF  EEAEDAGGVR
Sbjct: 723  QFIELNVSRNNLVVDTIRELSLYTQHDYKKPLKV------------KFIDEEAEDAGGVR 770

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF MLL+KEILDPK+GMF  YE+T  IWF++ +FED  MY+LIG
Sbjct: 771  KEFFMLLIKEILDPKFGMFVNYEDTNMIWFNDSSFEDVTMYYLIG 815



 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 126/385 (32%), Positives = 192/385 (49%), Gaps = 43/385 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+ALN+ G+++TWG D+ GQLGLE+ D+  Q  PK VK LAS+ +VQ   GY HC+
Sbjct: 112 GEAHSMALNEWGQLYTWGSDSCGQLGLET-DEGIQYKPKIVKTLASMLLVQISCGYKHCM 170

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV-VQAC 121
            LT            + GE++TWG +             + S P  V  L  + +   AC
Sbjct: 171 ALT------------NHGELYTWGSNEF-GQLGLGLGPGNVSKPTLVNSLVGLPISFIAC 217

Query: 122 AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITS 167
            GY H  V++ SG V    K +    G  S  S          + V+   +         
Sbjct: 218 GGY-HSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVF 276

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G ++T G   YGQ+G + S +    P++V  L+   +  + CG  H+  L  S  R
Sbjct: 277 LTYDGGVFTCGAGMYGQLG-HGSFSNEIVPRKVLELMGSTVTQVTCGRRHTLTLVPSKGR 335

Query: 228 LYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           +Y+FG+GS  QL +  S++  TPQL+ GPW+ SP        S++  +   VVK IY+GG
Sbjct: 336 VYSFGLGSVGQLGTKSSINSNTPQLVLGPWL-SPSGT-----SMIETNKQYVVKSIYAGG 389

Query: 287 DHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYL 346
           D   V VT  S  +  DD+R++  ++QI  V    +      +  +  +  +DQ+ + ++
Sbjct: 390 DQCFVRVTHKSLDICPDDYRIIQESSQIWTVKLSDV----INLSTILPENPVDQERMSFV 445

Query: 347 ETVFLSPGCMNGSFLQVENDEHFSC 371
           E V  S  C+NGSFL + ND H++C
Sbjct: 446 EIVMSSLSCLNGSFLML-NDIHYTC 469



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/281 (35%), Positives = 138/281 (49%), Gaps = 71/281 (25%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LA+ + G+++  G +  GQLG +    K Q IP  V+ L   SV  AC          
Sbjct: 65  HTLAVTEDGQLYACGSNDFGQLGHDGCRTKLQKIPG-VESLVMTSV--AC---------- 111

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+ALN+ G+++TWG D+ GQLGLE+ D+  Q  PK VK LAS+ +VQ   GY 
Sbjct: 112 ---GEAHSMALNEWGQLYTWGSDSCGQLGLET-DEGIQYKPKIVKTLASMLLVQISCGYK 167

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HC+ LT+ G                                      ELYTWG+NE+GQ+
Sbjct: 168 HCMALTNHG--------------------------------------ELYTWGSNEFGQL 189

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS-------VSRLYAFGIGSAVQ 238
           G+      V+KP  V SLV LPI+ IACG  HSFV+SKS        +     GI S   
Sbjct: 190 GLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTS 249

Query: 239 LDSPKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
           L SP  + KT + +   +IA       GED    +++ GG+
Sbjct: 250 LSSPAQL-KTIRTVKVKYIA------GGEDFSVFLTYDGGV 283



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 44/76 (57%), Positives = 57/76 (75%), Gaps = 4/76 (5%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+       YE+T  IWF++ +FED  M +LIG +CGLAIYN+ II++PFP+ALYKK
Sbjct: 784 PKFGM----FVNYEDTNMIWFNDSSFEDVTMYYLIGLMCGLAIYNFIIIDLPFPVALYKK 839

Query: 773 ILDEPILLQDLKDLSP 788
           +L+EPI LQD KDL P
Sbjct: 840 LLNEPITLQDFKDLDP 855



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/113 (43%), Positives = 65/113 (57%), Gaps = 6/113 (5%)

Query: 417 YLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSN 476
           ++E V  S  C+NGSFL + ND H++C   N G+D  L   C+D I+ +   S+  L   
Sbjct: 444 FVEIVMSSLSCLNGSFLML-NDIHYTCTENNHGIDFDLAALCFDAISHVRNTSLSDL--- 499

Query: 477 LAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
             IL S A  V SL    PD E+LR +LTLP+YHEF N     IL +P+A AL
Sbjct: 500 --ILTSLASAVDSLSLPSPDVESLRFYLTLPMYHEFKNITNATILQVPYAEAL 550


>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
 gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
          Length = 1053

 Score =  201 bits (510), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/337 (33%), Positives = 173/337 (51%), Gaps = 84/337 (24%)

Query: 813  FRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGD-------ITFNRKLSFCLQV 865
               W+     DYFE+++  F    ++++     ++  N +       + +NR L   L++
Sbjct: 549  LEKWWGQTPSDYFEQMVNNFLHVTMHIISFKLGIEVINQNEPRQKKLLPYNRDLEAVLRL 608

Query: 866  LQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRW 925
            L+ L  +N+                          ++ Y  F+ PDL+   D++ +Y RW
Sbjct: 609  LENLCRVNDNR----------------------DERLNYQLFHWPDLSDYVDVQQEYLRW 646

Query: 926  ISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQ 985
            I   P  +    +CN+PF+FDA AKT LL+ DQ +QM  AM+      F    N   ++Q
Sbjct: 647  I--MPETAAEFNICNFPFLFDASAKTALLQADQALQMHSAMSNAISNAFYNLLNYGHVSQ 704

Query: 986  YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
            Y+ + V+R+N+V+D++REL +Y+ +D KKPLK+            KF GEEAEDAGGVR+
Sbjct: 705  YIVLNVTRENLVQDSLRELQRYSQSDLKKPLKI------------KFHGEEAEDAGGVRK 752

Query: 1046 EFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFK 1105
            EF MLLLK+++DPKYGMFKE+E++R +WF++ TFE +NMYFL                  
Sbjct: 753  EFFMLLLKDLIDPKYGMFKEFEDSRVMWFADVTFETENMYFL------------------ 794

Query: 1106 EYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                   IG LCGLAIYN+T+
Sbjct: 795  -----------------------IGVLCGLAIYNFTI 808



 Score =  189 bits (480), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 130/396 (32%), Positives = 205/396 (51%), Gaps = 46/396 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL + G+V +WG +  GQLG  ++D+    +PK V+ L S +VVQ   G +H  
Sbjct: 94  GSRHSMALTEWGQVLSWGDNECGQLG-HASDQDVIQLPKIVRYLVSKTVVQIACGNNH-- 150

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQAC 121
                     SLAL  CGE+++WG + +GQLG++S  + SQ + P R+  L  +      
Sbjct: 151 ----------SLALTCCGELYSWGSNIYGQLGVKSPSELSQCNYPMRLTTLLGIPAAAIA 200

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCG----------SDPSQ-------GVQSNLVQDSHTT 164
            G +H  +++ S  V    + N CG          + P+Q       GV+     D  + 
Sbjct: 201 CGGNHTFLISKSSAVFGWGR-NNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSV 259

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              L + G ++T G   YGQ+G   S+  +  P+ V  L+   I+ +ACG  H+  L  S
Sbjct: 260 F--LTNEGGVFTCGAGAYGQLGHGFSSNEML-PRMVMELMGSTISQVACGNRHTLALVPS 316

Query: 225 VSRLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIA-SPVAMTAGEDSLVSHSGGLVVKKI 282
             R+Y FG+GS+ QL +  +     PQ++ GPW++ S  A+    D  +S    +V+ +I
Sbjct: 317 RGRIYGFGLGSSGQLGTRNTKSLNLPQVVIGPWVSPSGSALLQSSDEKIS----VVIHQI 372

Query: 283 YSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDL 342
           +SGGD SIVT +   D V   D RV  P +QIL +  +  ++C R     K  +  D DL
Sbjct: 373 FSGGDQSIVTTSLFVDKVPPADCRVYEPKSQILVLTADATRQCAR----FKEGDQSDLDL 428

Query: 343 LLYLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSF 378
           L  +E +F S  C+NGSFL ++ D+HF C+++ +  
Sbjct: 429 LNSMELIFKSQACLNGSFL-LDQDKHFGCSARNYGL 463



 Score =  105 bits (262), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 116/265 (43%), Gaps = 80/265 (30%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLW--- 71
           E++ WG  +HGQLGL   + +    P ++      +V Q   G+ H L LT++  ++   
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACG 61

Query: 72  -----------------------------------HSLALNDCGEVFTWGGDTHGQLGLE 96
                                              HS+AL + G+V +WG +  GQLG  
Sbjct: 62  SNDYSQLGHELPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNECGQLG-H 120

Query: 97  SADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN 156
           ++D+    +PK V+ L S +VVQ   G +H L LT                         
Sbjct: 121 ASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCC----------------------- 157

Query: 157 LVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN--TTVTKPQRVESLVNLPIALIACG 214
                          GELY+WG+N YGQ+G+ + +  +    P R+ +L+ +P A IACG
Sbjct: 158 ---------------GELYSWGSNIYGQLGVKSPSELSQCNYPMRLTTLLGIPAAAIACG 202

Query: 215 ANHSFVLSKSVSRLYAFGIGSAVQL 239
            NH+F++SKS S ++ +G  +  QL
Sbjct: 203 GNHTFLISKS-SAVFGWGRNNCGQL 226



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/102 (54%), Positives = 77/102 (75%), Gaps = 4/102 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+      E+E++R +WF++ TFE +NM FLIG LCGLAIYN+TIIN+PFPLALYKK
Sbjct: 765 PKYGM----FKEFEDSRVMWFADVTFETENMYFLIGVLCGLAIYNFTIINLPFPLALYKK 820

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
           +L +P+ L DL+++SPT A S+Q +LDY   D ++ F +TF 
Sbjct: 821 LLKKPVDLSDLREMSPTEANSMQALLDYDGDDFKETFDLTFE 862



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 76/112 (67%), Gaps = 7/112 (6%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLV-SN 476
           +E +F S  C+NGSFL ++ D+HF C+++N G+D++  Q  +D + ++E +S++ ++  N
Sbjct: 432 MELIFKSQACLNGSFL-LDQDKHFGCSARNYGLDLKSAQLAFDNLRKVENQSIKQVIWDN 490

Query: 477 LAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGA 528
           L        L+ SL  +P D E++R++L LPLYHEF+N + ++ LH+PFA A
Sbjct: 491 LT-----KELIGSLVASPADVESMRIYLLLPLYHEFVNSKHYKTLHVPFANA 537


>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
            ubiquitin ligase [Rhipicephalus pulchellus]
          Length = 1175

 Score =  201 bits (510), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 110/282 (39%), Positives = 157/282 (55%), Gaps = 47/282 (16%)

Query: 813  FRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSL 872
               W+ L ++  FE L+ IFK+C++Y+L         +G       L   L +L +LN++
Sbjct: 678  LNKWWSLFTEAQFEDLLTIFKECVVYILAHQMQTKKNHG------YLKLALDILARLNTV 731

Query: 873  NNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISG-RPN 931
            N E                       G  V+Y  FY+P++    D+++DY +WI G   +
Sbjct: 732  NKEC----------------------GGLVSYEHFYIPEVTDKVDVQLDYIQWIQGSNED 769

Query: 932  GSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAM----NQTNFYLFLQTFNPHTLNQYL 987
             S + + C+YPF+F+A+AKT +L+ D  IQM+ AM     QT   + L    P   N YL
Sbjct: 770  RSNKVYFCHYPFVFNAQAKTLILQTDSHIQMQQAMESACQQTIASMILPVVPPS--NPYL 827

Query: 988  EVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREF 1047
             + V R+NIV DT+ +LA  +  D KKPLKV            +F GE+A DAGGV++EF
Sbjct: 828  VLYVGRENIVNDTLNQLADQSAADLKKPLKV------------QFHGEDAVDAGGVKKEF 875

Query: 1048 LMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             +LLLKEILDPKYGMF EY E+R IWF+  +FE+  MY+LIG
Sbjct: 876  FLLLLKEILDPKYGMFTEYPESRCIWFNTQSFEEDVMYYLIG 917



 Score =  145 bits (365), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 202/462 (43%), Gaps = 110/462 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+D G+VF+WG + +GQLG    +++S+  PK +K LA++ +VQ   G  HCL
Sbjct: 143 GEAHSLALSDAGQVFSWGCNRNGQLGC-GTEEESRLRPKVIKKLATLHIVQIACGAVHCL 201

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                       AL + GE+F+WGG+  GQLGL      ++ +P+RV  L  V +     
Sbjct: 202 ------------ALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVAC 249

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDP-------------SQGVQSNLVQDSHTTI 165
           G  H + LT SG V    + N CG    SD              SQ ++     ++HT  
Sbjct: 250 GAMHSVGLTPSGTVFVWGR-NSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHT-- 306

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L + G ++T+G   YGQ+G +        P+RV  L+   I+ ++CG  H+   +   
Sbjct: 307 AALTADGGVFTFGAGTYGQLG-HGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQS 365

Query: 226 SRLYAFGIGSAVQ-----LDSPKSVHKTPQLIHG----------PWIASPVAMTAGEDSL 270
            RLY FG+G + Q     L+S       P L HG          P     ++  A E   
Sbjct: 366 GRLYIFGLGMSGQLGNGTLESSALPVTVPGLWHGVTHPSQVNRSPSPRPQISQNAIEAIP 425

Query: 271 VSHSGGLVVKKIYSGGDHSIVTVTKSS-------DGVLSDDFRVL--------------- 308
           V  S  +      SG D   +    ++       D V++ D  VL               
Sbjct: 426 VEDSWSINHSDEVSGDDRGALAPPSATRDERLTPDDVIAADLAVLDTSDADDAESSQSSG 485

Query: 309 ----NPATQIL--------DVNF---------------ERLKECEREVEQLKSD------ 335
               +P + ++        D NF               +R  + E ++  L +D      
Sbjct: 486 VSTADPDSPLVVYRVIAGWDRNFLLCHEFKADAPRPVDQRYHQKETQILSLDNDILEQLP 545

Query: 336 -----ETLDQDLLLYLETVFLSPGCMNGSFLQVENDEHFSCN 372
                E + Q+LL YLETVF S  C+N S+L+ E+D HF+C+
Sbjct: 546 FLAATEQVPQELLAYLETVFSSCACLNASYLK-EDDGHFNCS 586



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/96 (59%), Positives = 73/96 (76%), Gaps = 1/96 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ TEY E+R IWF+  +FE+  M +LIG +CGLAIYN+TII +PFPL LYKK+L +  
Sbjct: 888 YGMFTEYPESRCIWFNTQSFEEDVMYYLIGIVCGLAIYNFTIIALPFPLVLYKKLLKQKP 947

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
            L+DL DLSPTLAK LQ++LDY   DLE+ F +TF 
Sbjct: 948 TLKDLHDLSPTLAKGLQNLLDYDGDDLENTFFLTFE 983



 Score =  104 bits (259), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 116/250 (46%), Gaps = 60/250 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+L L   G V++ G +  GQLG + + +K + +                A  S   
Sbjct: 93  GHKHTLVLLANGSVYSCGANDFGQLGQDRSMRKLEQV----------------AALSAHE 136

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           +     G  HSLAL+D G+VF+WG + +GQLG    +++S+  PK +K LA++ +VQ   
Sbjct: 137 IRAVACGEAHSLALSDAGQVFSWGCNRNGQLGC-GTEEESRLRPKVIKKLATLHIVQIAC 195

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  HCL L ++                                      GEL++WG N  
Sbjct: 196 GAVHCLALANN--------------------------------------GELFSWGGNAS 217

Query: 183 GQMGINNSNTTVTK-PQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL-- 239
           GQ+G+   +T   + P+RV  LV +P+AL+ACGA HS  L+ S   ++ +G  S  QL  
Sbjct: 218 GQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPS-GTVFVWGRNSCGQLGL 276

Query: 240 -DSPKSVHKT 248
            D    +H T
Sbjct: 277 SDQRDRLHPT 286



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 59/105 (56%), Gaps = 7/105 (6%)

Query: 411 VPKSWL-YLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERES 469
           VP+  L YLETVF S  C+N S+L+ E+D HF+C+  NPGVD++  +  +  I   +  S
Sbjct: 553 VPQELLAYLETVFSSCACLNASYLK-EDDGHFNCSELNPGVDLEAARHGFQCIQDAKNPS 611

Query: 470 VRSLVSNLAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMN 514
           V  +V      A    +VK L   P D EA+R+ L LPL   F +
Sbjct: 612 VAEVVG-----ACLEEMVKGLAAGPSDIEAMRVLLLLPLCQFFKD 651



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 18/175 (10%)

Query: 82  VFTWGGDTHGQLGL----ESADKKSQ-SIPKRVKGLASVSVVQACAGYSHCLVLTSSG-V 135
           +++WG   +G+LGL    +  D ++  S P+RV+   + +V +   G+ H LVL ++G V
Sbjct: 47  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 106

Query: 136 VTCTHKENG-CGSDPSQGVQSNLVQDSHTTIT----------SLNSPGELYTWGNNEYGQ 184
            +C   + G  G D S      +   S   I           +L+  G++++WG N  GQ
Sbjct: 107 YSCGANDFGQLGQDRSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQ 166

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           +G      +  +P+ ++ L  L I  IACGA H   L+ +   L+++G  ++ QL
Sbjct: 167 LGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANN-GELFSWGGNASGQL 220



 Score = 44.3 bits (103), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 7/88 (7%)

Query: 170 SPGELYTWGNNEYGQMGIN------NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
           +P  LY+WG    G++G+       ++ T V++P+RV       +  +ACG  H+ VL  
Sbjct: 43  APMLLYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLA 102

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQL 251
           + S +Y+ G     QL   +S+ K  Q+
Sbjct: 103 NGS-VYSCGANDFGQLGQDRSMRKLEQV 129


>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
            ubiquitin ligase, partial [Rhipicephalus pulchellus]
          Length = 1181

 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 110/282 (39%), Positives = 157/282 (55%), Gaps = 47/282 (16%)

Query: 813  FRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSL 872
               W+ L ++  FE L+ IFK+C++Y+L         +G       L   L +L +LN++
Sbjct: 684  LNKWWSLFTEAQFEDLLTIFKECVVYILAHQMQTKKNHG------YLKLALDILARLNTV 737

Query: 873  NNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISG-RPN 931
            N E                       G  V+Y  FY+P++    D+++DY +WI G   +
Sbjct: 738  NKEC----------------------GGLVSYEHFYIPEVTDKVDVQLDYIQWIQGSNED 775

Query: 932  GSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAM----NQTNFYLFLQTFNPHTLNQYL 987
             S + + C+YPF+F+A+AKT +L+ D  IQM+ AM     QT   + L    P   N YL
Sbjct: 776  RSNKVYFCHYPFVFNAQAKTLILQTDSHIQMQQAMESACQQTIASMILPVVPPS--NPYL 833

Query: 988  EVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREF 1047
             + V R+NIV DT+ +LA  +  D KKPLKV            +F GE+A DAGGV++EF
Sbjct: 834  VLYVGRENIVNDTLNQLADQSAADLKKPLKV------------QFHGEDAVDAGGVKKEF 881

Query: 1048 LMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             +LLLKEILDPKYGMF EY E+R IWF+  +FE+  MY+LIG
Sbjct: 882  FLLLLKEILDPKYGMFTEYPESRCIWFNTQSFEEDVMYYLIG 923



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 202/462 (43%), Gaps = 110/462 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+D G+VF+WG + +GQLG    +++S+  PK +K LA++ +VQ   G  HCL
Sbjct: 149 GEAHSLALSDAGQVFSWGCNRNGQLGC-GTEEESRLRPKVIKKLATLHIVQIACGAVHCL 207

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                       AL + GE+F+WGG+  GQLGL      ++ +P+RV  L  V +     
Sbjct: 208 ------------ALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVAC 255

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDP-------------SQGVQSNLVQDSHTTI 165
           G  H + LT SG V    + N CG    SD              SQ ++     ++HT  
Sbjct: 256 GAMHSVGLTPSGTVFVWGR-NSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHT-- 312

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L + G ++T+G   YGQ+G +        P+RV  L+   I+ ++CG  H+   +   
Sbjct: 313 AALTADGGVFTFGAGTYGQLG-HGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQS 371

Query: 226 SRLYAFGIGSAVQ-----LDSPKSVHKTPQLIHG----------PWIASPVAMTAGEDSL 270
            RLY FG+G + Q     L+S       P L HG          P     ++  A E   
Sbjct: 372 GRLYIFGLGMSGQLGNGTLESSALPVTVPGLWHGVTHPSQVNRSPSPRPQISQNAIEAIP 431

Query: 271 VSHSGGLVVKKIYSGGDHSIVTVTKSS-------DGVLSDDFRVL--------------- 308
           V  S  +      SG D   +    ++       D V++ D  VL               
Sbjct: 432 VEDSWSINHSDEVSGDDRGALAPPSATRDERLTPDDVIAADLAVLDTSDADDAESSQSSG 491

Query: 309 ----NPATQIL--------DVNF---------------ERLKECEREVEQLKSD------ 335
               +P + ++        D NF               +R  + E ++  L +D      
Sbjct: 492 VSTADPDSPLVVYRVIAGWDRNFLLCHEFKADAPRPVDQRYHQKETQILSLDNDILEQLP 551

Query: 336 -----ETLDQDLLLYLETVFLSPGCMNGSFLQVENDEHFSCN 372
                E + Q+LL YLETVF S  C+N S+L+ E+D HF+C+
Sbjct: 552 FLAATEQVPQELLAYLETVFSSCACLNASYLK-EDDGHFNCS 592



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/96 (59%), Positives = 73/96 (76%), Gaps = 1/96 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ TEY E+R IWF+  +FE+  M +LIG +CGLAIYN+TII +PFPL LYKK+L +  
Sbjct: 894 YGMFTEYPESRCIWFNTQSFEEDVMYYLIGIVCGLAIYNFTIIALPFPLVLYKKLLKQKP 953

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
            L+DL DLSPTLAK LQ++LDY   DLE+ F +TF 
Sbjct: 954 TLKDLHDLSPTLAKGLQNLLDYDGDDLENTFFLTFE 989



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 116/250 (46%), Gaps = 60/250 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+L L   G V++ G +  GQLG + + +K + +                A  S   
Sbjct: 99  GHKHTLVLLANGSVYSCGANDFGQLGQDRSMRKLEQV----------------AALSAHE 142

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           +     G  HSLAL+D G+VF+WG + +GQLG    +++S+  PK +K LA++ +VQ   
Sbjct: 143 IRAVACGEAHSLALSDAGQVFSWGCNRNGQLGC-GTEEESRLRPKVIKKLATLHIVQIAC 201

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  HCL L ++                                      GEL++WG N  
Sbjct: 202 GAVHCLALANN--------------------------------------GELFSWGGNAS 223

Query: 183 GQMGINNSNTTVTK-PQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL-- 239
           GQ+G+   +T   + P+RV  LV +P+AL+ACGA HS  L+ S   ++ +G  S  QL  
Sbjct: 224 GQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPS-GTVFVWGRNSCGQLGL 282

Query: 240 -DSPKSVHKT 248
            D    +H T
Sbjct: 283 SDQRDRLHPT 292



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 59/105 (56%), Gaps = 7/105 (6%)

Query: 411 VPKSWL-YLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERES 469
           VP+  L YLETVF S  C+N S+L+ E+D HF+C+  NPGVD++  +  +  I   +  S
Sbjct: 559 VPQELLAYLETVFSSCACLNASYLK-EDDGHFNCSELNPGVDLEAARHGFQCIQDAKNPS 617

Query: 470 VRSLVSNLAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMN 514
           V  +V      A    +VK L   P D EA+R+ L LPL   F +
Sbjct: 618 VAEVVG-----ACLEEMVKGLAAGPSDIEAMRVLLLLPLCQFFKD 657



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 91/177 (51%), Gaps = 22/177 (12%)

Query: 82  VFTWGGDTHGQLGL----ESADKKSQ-SIPKRVKGLASVSVVQACAGYSHCLVLTSSG-V 135
           +++WG   +G+LGL    +  D ++  S P+RV+   + +V +   G+ H LVL ++G V
Sbjct: 53  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 112

Query: 136 VTCTHKENG-CGSDPS------------QGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
            +C   + G  G D S              +++    ++H+   +L+  G++++WG N  
Sbjct: 113 YSCGANDFGQLGQDRSMRKLEQVAALSAHEIRAVACGEAHS--LALSDAGQVFSWGCNRN 170

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           GQ+G      +  +P+ ++ L  L I  IACGA H   L+ +   L+++G  ++ QL
Sbjct: 171 GQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANN-GELFSWGGNASGQL 226



 Score = 44.3 bits (103), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 7/88 (7%)

Query: 170 SPGELYTWGNNEYGQMGIN------NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
           +P  LY+WG    G++G+       ++ T V++P+RV       +  +ACG  H+ VL  
Sbjct: 49  APMLLYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLA 108

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQL 251
           + S +Y+ G     QL   +S+ K  Q+
Sbjct: 109 NGS-VYSCGANDFGQLGQDRSMRKLEQV 135


>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform 1
            [Acyrthosiphon pisum]
          Length = 1053

 Score =  200 bits (508), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/285 (43%), Positives = 165/285 (57%), Gaps = 36/285 (12%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
            T   W   M   YF  L++++K   I    Q     ++     +++ L     +L KLN 
Sbjct: 541  TIEFWISSMPVVYFNTLLMVYKNVFI---DQLNTNTNSTEQKCWDKALIVAASMLAKLNK 597

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            LN+       +  G  V         G  KV YT+FY+P L+   DI  DY +W+    N
Sbjct: 598  LNS-------NLNGHQVK-------KGQLKVPYTSFYIPQLSDKIDIPSDYMKWMRADNN 643

Query: 932  G-STRDF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTF----NPHTL-N 984
            G   +DF  CNYPF+F+A+AKT LL++DQ++QM+ AM       F Q      N H L N
Sbjct: 644  GIKYQDFYFCNYPFLFNAEAKTILLQVDQKVQMQQAMQAAATRAFTQMLFLDVNQHNLAN 703

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
            Q++E+ VSR+N+V DTIREL+ YT +D+KKPLKV            KF  EEAEDAGGVR
Sbjct: 704  QFIELNVSRNNLVVDTIRELSLYTQHDYKKPLKV------------KFIDEEAEDAGGVR 751

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF MLL+KEILDPK+GMF  YE+T  IWF++ +FED  MY+LIG
Sbjct: 752  KEFFMLLIKEILDPKFGMFVNYEDTNMIWFNDSSFEDVTMYYLIG 796



 Score =  177 bits (448), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 126/385 (32%), Positives = 192/385 (49%), Gaps = 43/385 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+ALN+ G+++TWG D+ GQLGLE+ D+  Q  PK VK LAS+ +VQ   GY HC+
Sbjct: 93  GEAHSMALNEWGQLYTWGSDSCGQLGLET-DEGIQYKPKIVKTLASMLLVQISCGYKHCM 151

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV-VQAC 121
            LT+             GE++TWG +             + S P  V  L  + +   AC
Sbjct: 152 ALTNH------------GELYTWGSNEF-GQLGLGLGPGNVSKPTLVNSLVGLPISFIAC 198

Query: 122 AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITS 167
            GY H  V++ SG V    K +    G  S  S          + V+   +         
Sbjct: 199 GGY-HSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVF 257

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G ++T G   YGQ+G + S +    P++V  L+   +  + CG  H+  L  S  R
Sbjct: 258 LTYDGGVFTCGAGMYGQLG-HGSFSNEIVPRKVLELMGSTVTQVTCGRRHTLTLVPSKGR 316

Query: 228 LYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           +Y+FG+GS  QL +  S++  TPQL+ GPW+ SP        S++  +   VVK IY+GG
Sbjct: 317 VYSFGLGSVGQLGTKSSINSNTPQLVLGPWL-SPSGT-----SMIETNKQYVVKSIYAGG 370

Query: 287 DHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYL 346
           D   V VT  S  +  DD+R++  ++QI  V    +      +  +  +  +DQ+ + ++
Sbjct: 371 DQCFVRVTHKSLDICPDDYRIIQESSQIWTVKLSDV----INLSTILPENPVDQERMSFV 426

Query: 347 ETVFLSPGCMNGSFLQVENDEHFSC 371
           E V  S  C+NGSFL + ND H++C
Sbjct: 427 EIVMSSLSCLNGSFLML-NDIHYTC 450



 Score =  131 bits (329), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/281 (35%), Positives = 138/281 (49%), Gaps = 71/281 (25%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LA+ + G+++  G +  GQLG +    K Q IP  V+ L   SV  AC          
Sbjct: 46  HTLAVTEDGQLYACGSNDFGQLGHDGCRTKLQKIPG-VESLVMTSV--AC---------- 92

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+ALN+ G+++TWG D+ GQLGLE+ D+  Q  PK VK LAS+ +VQ   GY 
Sbjct: 93  ---GEAHSMALNEWGQLYTWGSDSCGQLGLET-DEGIQYKPKIVKTLASMLLVQISCGYK 148

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HC+ LT+ G                                      ELYTWG+NE+GQ+
Sbjct: 149 HCMALTNHG--------------------------------------ELYTWGSNEFGQL 170

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS-------VSRLYAFGIGSAVQ 238
           G+      V+KP  V SLV LPI+ IACG  HSFV+SKS        +     GI S   
Sbjct: 171 GLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTS 230

Query: 239 LDSPKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
           L SP  + KT + +   +IA       GED    +++ GG+
Sbjct: 231 LSSPAQL-KTIRTVKVKYIA------GGEDFSVFLTYDGGV 264



 Score =  120 bits (302), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 54/102 (52%), Positives = 75/102 (73%), Gaps = 4/102 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+       YE+T  IWF++ +FED  M +LIG +CGLAIYN+ II++PFP+ALYKK
Sbjct: 765 PKFGM----FVNYEDTNMIWFNDSSFEDVTMYYLIGLMCGLAIYNFIIIDLPFPVALYKK 820

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
           +L+EPI LQD KDL P +  S +++L Y +PDL++VF +TF 
Sbjct: 821 LLNEPITLQDFKDLDPMVGISFEELLAYNKPDLDEVFNLTFE 862



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/113 (43%), Positives = 65/113 (57%), Gaps = 6/113 (5%)

Query: 417 YLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSN 476
           ++E V  S  C+NGSFL + ND H++C   N G+D  L   C+D I+ +   S+  L   
Sbjct: 425 FVEIVMSSLSCLNGSFLML-NDIHYTCTENNHGIDFDLAALCFDAISHVRNTSLSDL--- 480

Query: 477 LAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
             IL S A  V SL    PD E+LR +LTLP+YHEF N     IL +P+A AL
Sbjct: 481 --ILTSLASAVDSLSLPSPDVESLRFYLTLPMYHEFKNITNATILQVPYAEAL 531


>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
 gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
          Length = 1058

 Score =  199 bits (507), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 139/393 (35%), Positives = 210/393 (53%), Gaps = 48/393 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+D G+V +WG +  GQLG  + +K+   +PK V+ L S +VVQ   G +H L
Sbjct: 98  GSRHSLALSDWGQVLSWGDNDCGQLG-HATEKEIVQLPKVVRQLVSKTVVQIACGNNHSL 156

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQAC 121
            LTS            CGE+++WG + +GQLG+ S +  +  + P R+  L  + +    
Sbjct: 157 ALTS------------CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIA 204

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCG----------SDPSQ-------GVQSNLVQDSHTT 164
            G +H  +++ SG V    + N CG          + P+Q       GV+     D  + 
Sbjct: 205 CGGNHSFLISKSGAVFGWGRNN-CGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSV 263

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              L + G ++T G   YGQ+G   S+  +  P+ V  L+   I  +ACG  H+  L  S
Sbjct: 264 F--LTNEGGVFTCGAGAYGQLGHGFSSNEML-PRMVMELMGSTITQVACGNRHTLALVPS 320

Query: 225 VSRLYAFGIGSAVQLD--SPKSVHKTPQLIHGPWIA-SPVAMTAGEDSLVSHSGGLVVKK 281
             ++YAFG+GS+ QL   S KS+   PQ++ GPW++ S  A     DS VS    LV+++
Sbjct: 321 RGKVYAFGLGSSGQLGTRSTKSL-MLPQVVIGPWVSPSGSAQLQSNDSQVS----LVIRQ 375

Query: 282 IYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           I+SGGD SIVT T   D V  +DFR+ NP +QIL +  E  ++C +  +  +S    D D
Sbjct: 376 IFSGGDQSIVTTTLFIDKVPPEDFRIYNPKSQILTLTAEVTRQCAQSKQGCQS----DMD 431

Query: 342 LLLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           LL  +E +F S  C NGSFL +++D HF C+ +
Sbjct: 432 LLSSIELIFKSQACWNGSFL-LDHDRHFGCSVR 463



 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 115/337 (34%), Positives = 172/337 (51%), Gaps = 87/337 (25%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQ-QPGVVDST------NGDITFNRKLSFCLQVLQ 867
             W      +YFE L+  F   +++++  + G+  ++         + +N +L   L +++
Sbjct: 555  KWLAQTPTEYFEHLVQNFLHVVVHIISFKMGLAAASPRAERRQQLLPYNTELEVILTLMK 614

Query: 868  KLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWIS 927
             L  +NNE                         ++ Y  FY PDL+   D++ +Y +WI 
Sbjct: 615  TLCQINNER----------------------DDRLNYQIFYWPDLSDYADVQHEYIKWIM 652

Query: 928  GRPNGSTRDF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAM-NQTNFYLFLQTFNPHTLNQ 985
                G+  +F +CNY FIFD  AKT LL+ DQ +QM  AM N    + F        + Q
Sbjct: 653  A---GTAGEFNICNYSFIFDQSAKTALLQADQALQMHSAMANAATMHAFNFLNYGMPIPQ 709

Query: 986  YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
            ++ + V+R+N+V+D++REL QY+ +D KKPL++            KF GEEAEDAGGVR+
Sbjct: 710  FIVLNVTRENLVQDSLRELQQYSQSDLKKPLRI------------KFHGEEAEDAGGVRK 757

Query: 1046 EFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFK 1105
            EF MLLLK++LDPKYGMFKEYE++R +WF++ +FE +NMYFL                  
Sbjct: 758  EFFMLLLKDLLDPKYGMFKEYEQSRFLWFADLSFETENMYFL------------------ 799

Query: 1106 EYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                   IG LCGLAIYN+T+
Sbjct: 800  -----------------------IGVLCGLAIYNFTI 813



 Score =  122 bits (307), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/96 (58%), Positives = 76/96 (79%), Gaps = 1/96 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  EYE++R +WF++ +FE +NM FLIG LCGLAIYN+TIIN+PFPLALYKK+L +P+
Sbjct: 772 YGMFKEYEQSRFLWFADLSFETENMYFLIGVLCGLAIYNFTIINLPFPLALYKKLLGKPV 831

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
            L DL+ LSP  A S+Q +LDY+  D ++VF +TF 
Sbjct: 832 DLSDLRHLSPPEANSMQSLLDYQGEDFKEVFDLTFE 867



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 120/265 (45%), Gaps = 80/265 (30%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLW--- 71
           E++ WG  +HGQLGL   + +    P+++      +V Q   G+ H L LT+T  ++   
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 72  -----------------------------------HSLALNDCGEVFTWGGDTHGQLGLE 96
                                              HSLAL+D G+V +WG +  GQLG  
Sbjct: 66  SNDYSQLGHDLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLG-H 124

Query: 97  SADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN 156
           + +K+   +PK V+ L S +VVQ   G +H L LTS                        
Sbjct: 125 ATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSC----------------------- 161

Query: 157 LVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN--TTVTKPQRVESLVNLPIALIACG 214
                          GELY+WG+N YGQ+G+N+ N  T    P R+ +L+ +P+A IACG
Sbjct: 162 ---------------GELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACG 206

Query: 215 ANHSFVLSKSVSRLYAFGIGSAVQL 239
            NHSF++SKS   ++ +G  +  QL
Sbjct: 207 GNHSFLISKS-GAVFGWGRNNCGQL 230



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 73/113 (64%), Gaps = 7/113 (6%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLV-SN 476
           +E +F S  C NGSFL +++D HF C+ +N G+D++  Q  +D +  +E ES+R ++  N
Sbjct: 436 IELIFKSQACWNGSFL-LDHDRHFGCSVRNHGLDLKAAQLAFDNLRVVENESIRQVIWDN 494

Query: 477 LAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +        LV SL  +P D E++R++L LPLYHEF+N + ++ L +PFA A+
Sbjct: 495 IT-----KELVVSLVCSPADVESMRLYLLLPLYHEFVNSKHYKSLQVPFANAI 542



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 41/234 (17%)

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
           E++ WG  +HGQLGL   + +    P+++      +V Q   G+ H L LT++G V    
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVY--- 62

Query: 141 KENGCGSDPSQGVQSNLVQDSHTTIT------------------SLNSPGELYTWGNNEY 182
               CGS+    +  +L       I                   +L+  G++ +WG+N+ 
Sbjct: 63  ---ACGSNDYSQLGHDLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDC 119

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G       V  P+ V  LV+  +  IACG NHS  L+ S   LY++G     QL   
Sbjct: 120 GQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT-SCGELYSWGSNIYGQL--- 175

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKS 296
             V+    L H  +   P+ +T    +L+    G+ +  I  GG+HS + ++KS
Sbjct: 176 -GVNSPNDLTHCNY---PLRLT----TLL----GIPLAAIACGGNHSFL-ISKS 216


>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
 gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
          Length = 1057

 Score =  199 bits (507), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 140/393 (35%), Positives = 208/393 (52%), Gaps = 48/393 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL++ G+V +WG +  GQLG  + DK+   +PK V+ L S +VVQ   G +H L
Sbjct: 98  GSRHSLALSEWGQVLSWGDNDCGQLG-HATDKEIVQLPKVVRQLVSKTVVQIACGNNHSL 156

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLES-ADKKSQSIPKRVKGLASVSVVQAC 121
            LTS            CGE+++WG + +GQLG+ S  D    + P R+  L  + +    
Sbjct: 157 ALTS------------CGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIA 204

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCG----------SDPSQ-------GVQSNLVQDSHTT 164
            G +H  +++ SG V    + N CG          + P+Q       GV+     D  + 
Sbjct: 205 CGGNHSFLISKSGAVFGWGRNN-CGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSV 263

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              L + G ++T G   YGQ+G   S+  +  P+ V  L+   I  +ACG  H+  L  S
Sbjct: 264 F--LTNEGGVFTCGAGAYGQLGHGFSSNEML-PRMVMELMGSTITQVACGNRHTLALVPS 320

Query: 225 VSRLYAFGIGSAVQLD--SPKSVHKTPQLIHGPWIA-SPVAMTAGEDSLVSHSGGLVVKK 281
             R+YAFG+GS+ QL   S KS+   PQ++ GPW++ S  A+    D+ VS    +V+++
Sbjct: 321 RGRVYAFGLGSSGQLGTRSTKSL-MLPQVVIGPWVSPSGSALLQSNDAKVS----VVIRQ 375

Query: 282 IYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           I+SGGD SIVT T   + V  +DFR+ NP +QIL +  E  K+C     Q K     D D
Sbjct: 376 IFSGGDQSIVTTTLFMEKVPPEDFRIYNPKSQILALTAEVTKQC----AQFKQGGQSDMD 431

Query: 342 LLLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           LL  +E +F S  C NGSFL +++D HF C+ +
Sbjct: 432 LLSSIELIFKSQACWNGSFL-LDHDRHFGCSVR 463



 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/335 (34%), Positives = 171/335 (51%), Gaps = 84/335 (25%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQ-QPGV------VDSTNGDITFNRKLSFCLQVLQ 867
             W      +YFERL+      +++++  + G+      V+     + +N +L   L+++Q
Sbjct: 555  KWLAQTPAEYFERLVQNCLNVVVHIISFKMGLAAISPSVERRQRLLPYNTELEVILKLMQ 614

Query: 868  KLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWIS 927
             L  +NN                          ++ Y +FY PDL+   D++ ++ +WI 
Sbjct: 615  TLCQINNSR----------------------DDRLNYQSFYWPDLSDYADVQQEFVKWI- 651

Query: 928  GRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYL 987
               + ++   +CNY FIFD  AKT LL+ DQ +QM  AM       F        ++Q++
Sbjct: 652  -MVDTASEFNICNYSFIFDQSAKTALLQADQALQMHSAMANAATMAFSLINYGMPISQFI 710

Query: 988  EVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREF 1047
             + V+RDN+V+D++REL +Y+ +D KKPLK+            KF GEEAEDAGGVR+EF
Sbjct: 711  VLNVTRDNLVQDSLRELQRYSQSDLKKPLKI------------KFHGEEAEDAGGVRKEF 758

Query: 1048 LMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEY 1107
             MLLLK++LDPKYGMFKEYEE+R +WF++ TFE +NMYFL                    
Sbjct: 759  FMLLLKDLLDPKYGMFKEYEESRLLWFADLTFETENMYFL-------------------- 798

Query: 1108 EETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                 IG LCGLAIYN+T+
Sbjct: 799  ---------------------IGVLCGLAIYNFTI 812



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/96 (60%), Positives = 75/96 (78%), Gaps = 1/96 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  EYEE+R +WF++ TFE +NM FLIG LCGLAIYN+TIIN+PFPL LYKK+L +P+
Sbjct: 771 YGMFKEYEESRLLWFADLTFETENMYFLIGVLCGLAIYNFTIINLPFPLVLYKKLLGKPV 830

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
            L DL+ LSP  A S+Q +LDY+  D +DVF +TF 
Sbjct: 831 DLSDLRQLSPPEANSMQSLLDYQGEDFKDVFDLTFE 866



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 117/265 (44%), Gaps = 80/265 (30%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS-------- 66
           E++ WG  +HGQLGL   + +    P ++      +V Q   G+ H L LT+        
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACG 65

Query: 67  ------------------------------TTGLWHSLALNDCGEVFTWGGDTHGQLGLE 96
                                         + G  HSLAL++ G+V +WG +  GQLG  
Sbjct: 66  SNDHSQLGHELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQLG-H 124

Query: 97  SADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN 156
           + DK+   +PK V+ L S +VVQ   G +H L LTS                        
Sbjct: 125 ATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSC----------------------- 161

Query: 157 LVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN--TTVTKPQRVESLVNLPIALIACG 214
                          GELY+WG+N YGQ+G+N+    T    P R+ +L+ +P+A IACG
Sbjct: 162 ---------------GELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACG 206

Query: 215 ANHSFVLSKSVSRLYAFGIGSAVQL 239
            NHSF++SKS   ++ +G  +  QL
Sbjct: 207 GNHSFLISKS-GAVFGWGRNNCGQL 230



 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 73/113 (64%), Gaps = 7/113 (6%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLV-SN 476
           +E +F S  C NGSFL +++D HF C+ +N G+D+   Q  +D +  +E ES++ ++  N
Sbjct: 436 IELIFKSQACWNGSFL-LDHDRHFGCSVRNHGLDLNAAQLAFDNLRVVENESIKQVIWDN 494

Query: 477 LAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +        LV SL ++P D E++R++L LPLYHEF+N + ++ L +PFA A+
Sbjct: 495 IT-----KELVGSLVSSPADVESMRLYLLLPLYHEFVNSKHYKSLQVPFANAI 542



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 101/221 (45%), Gaps = 31/221 (14%)

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
           E++ WG  +HGQLGL   + +    P ++      +V Q   G+ H L LT++G V    
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVY--- 62

Query: 141 KENGCGSDPSQGVQSNL----------VQDSHTTITS--------LNSPGELYTWGNNEY 182
               CGS+    +   L          +QD      S        L+  G++ +WG+N+ 
Sbjct: 63  ---ACGSNDHSQLGHELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDC 119

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG--IGSAVQLD 240
           GQ+G       V  P+ V  LV+  +  IACG NHS  L+ S   LY++G  I   + ++
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT-SCGELYSWGSNIYGQLGVN 178

Query: 241 SPKSV-HKTPQLIHGPWIASPVAMTA--GEDS-LVSHSGGL 277
           SPK + H    L     +  P+A  A  G  S L+S SG +
Sbjct: 179 SPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAV 219


>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
 gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
          Length = 1058

 Score =  199 bits (506), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 138/393 (35%), Positives = 209/393 (53%), Gaps = 48/393 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+D G+V +WG +  GQLG  + +K+   +PK V+ L S +VVQ   G +H L
Sbjct: 98  GSRHSLALSDWGQVLSWGDNDCGQLG-HATEKEIVQLPKVVRQLVSKTVVQIACGNNHSL 156

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQAC 121
            LTS            CGE+++WG + +GQLG+ S +  +  + P R+  L  + +    
Sbjct: 157 ALTS------------CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIA 204

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCG----------SDPSQ-------GVQSNLVQDSHTT 164
            G +H  +++ SG V    + N CG          + P+Q       GV+     D  + 
Sbjct: 205 CGGNHSFLISKSGAVFGWGRNN-CGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSV 263

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              L + G ++T G   YGQ+G   S+  +  P+ V  L+   I  +ACG  H+     S
Sbjct: 264 F--LTNEGGVFTCGAGAYGQLGHGFSSNEML-PRMVMELMGSTITQVACGNRHTLAFVPS 320

Query: 225 VSRLYAFGIGSAVQLD--SPKSVHKTPQLIHGPWIA-SPVAMTAGEDSLVSHSGGLVVKK 281
             ++YAFG+GS+ QL   S KS+   PQ++ GPW++ S  A     DS VS    LV+++
Sbjct: 321 RGKVYAFGLGSSGQLGTRSTKSL-MLPQVVIGPWVSPSGSAQLQSNDSQVS----LVIRQ 375

Query: 282 IYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           I+SGGD SIVT T   D V  +DFR+ NP +QIL +  E  ++C +  +  +S    D D
Sbjct: 376 IFSGGDQSIVTTTLFIDKVPPEDFRIYNPKSQILTLTAEVTRQCAQSKQGCQS----DMD 431

Query: 342 LLLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           LL  +E +F S  C NGSFL +++D HF C+ +
Sbjct: 432 LLSSIELIFKSQACWNGSFL-LDHDRHFGCSVR 463



 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/336 (34%), Positives = 169/336 (50%), Gaps = 85/336 (25%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQ-QPGVVDST------NGDITFNRKLSFCLQVLQ 867
             W      +YFE L+  F   +++++  + G+  ++         + +N +L   L +++
Sbjct: 555  KWLAQTPTEYFEHLVQNFLHVVVHIISFKMGLAAASPRAERRQQLLPYNTELEVILTLMK 614

Query: 868  KLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWIS 927
             L  +NNE                         ++ Y  FY PDL+   D++ +Y +WI 
Sbjct: 615  TLCQINNER----------------------DDRLNYQIFYWPDLSDYADVQHEYIKWIM 652

Query: 928  GRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAM-NQTNFYLFLQTFNPHTLNQY 986
                G     +CNY FIFD  AKT LL+ DQ +QM  AM N    + F        + Q+
Sbjct: 653  ASTAGEFN--ICNYSFIFDQSAKTALLQADQALQMHSAMANAATMHAFNFLNYGMPIPQF 710

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            + + V+R+N+V+D++REL QYT +D KKPL++            KF GEEAEDAGGVR+E
Sbjct: 711  IVLNVTRENLVQDSLRELQQYTQSDLKKPLRI------------KFHGEEAEDAGGVRKE 758

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F MLLLK++LDPKYGMFKEYE++R +WF++ TFE +NMYFL                   
Sbjct: 759  FFMLLLKDLLDPKYGMFKEYEQSRFLWFADLTFETENMYFL------------------- 799

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG LCGLAIYN+T+
Sbjct: 800  ----------------------IGVLCGLAIYNFTI 813



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 57/96 (59%), Positives = 76/96 (79%), Gaps = 1/96 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  EYE++R +WF++ TFE +NM FLIG LCGLAIYN+TIIN+PFPLALYKK+L +P+
Sbjct: 772 YGMFKEYEQSRFLWFADLTFETENMYFLIGVLCGLAIYNFTIINLPFPLALYKKLLGKPV 831

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
            L DL+ LSP  A S+Q +LDY+  D ++VF +TF 
Sbjct: 832 DLSDLRQLSPPEANSMQSLLDYQGADFKEVFDLTFE 867



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 120/265 (45%), Gaps = 80/265 (30%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLW--- 71
           E++ WG  +HGQLGL   + +    P+++      +V Q   G+ H L LT+T  ++   
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACG 65

Query: 72  -----------------------------------HSLALNDCGEVFTWGGDTHGQLGLE 96
                                              HSLAL+D G+V +WG +  GQLG  
Sbjct: 66  SNDYSQLGHDLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLG-H 124

Query: 97  SADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN 156
           + +K+   +PK V+ L S +VVQ   G +H L LTS                        
Sbjct: 125 ATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSC----------------------- 161

Query: 157 LVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN--TTVTKPQRVESLVNLPIALIACG 214
                          GELY+WG+N YGQ+G+N+ N  T    P R+ +L+ +P+A IACG
Sbjct: 162 ---------------GELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACG 206

Query: 215 ANHSFVLSKSVSRLYAFGIGSAVQL 239
            NHSF++SKS   ++ +G  +  QL
Sbjct: 207 GNHSFLISKS-GAVFGWGRNNCGQL 230



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 74/113 (65%), Gaps = 7/113 (6%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLV-SN 476
           +E +F S  C NGSFL +++D HF C+ +N G+D++  Q  +D +  +E ES+R ++  N
Sbjct: 436 IELIFKSQACWNGSFL-LDHDRHFGCSVRNHGLDLKAAQLAFDNLRVVENESIRQVIWDN 494

Query: 477 LAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           ++       L+ SL  +P D E++R++L LPLYHEF+N + ++ L +PFA A+
Sbjct: 495 IS-----KELIGSLVCSPADVESMRLYLLLPLYHEFVNSKHYKSLQVPFANAI 542



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 41/234 (17%)

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
           E++ WG  +HGQLGL   + +    P+++      +V Q   G+ H L LT++G V    
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVY--- 62

Query: 141 KENGCGSDPSQGVQSNLVQDSHTTIT------------------SLNSPGELYTWGNNEY 182
               CGS+    +  +L       I                   +L+  G++ +WG+N+ 
Sbjct: 63  ---ACGSNDYSQLGHDLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDC 119

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G       V  P+ V  LV+  +  IACG NHS  L+ S   LY++G     QL   
Sbjct: 120 GQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT-SCGELYSWGSNIYGQL--- 175

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKS 296
             V+    L H  +   P+ +T    +L+    G+ +  I  GG+HS + ++KS
Sbjct: 176 -GVNSPNDLTHCNY---PLRLT----TLL----GIPLAAIACGGNHSFL-ISKS 216


>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
 gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
          Length = 1053

 Score =  199 bits (505), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 113/331 (34%), Positives = 174/331 (52%), Gaps = 72/331 (21%)

Query: 813  FRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSL 872
               W+     +YFE+++  F    ++++     ++  N +    +KL             
Sbjct: 549  LEKWWAQTPSEYFEQMVNNFLHVAMHIISFKMGIEVINHNEPRQKKLL------------ 596

Query: 873  NNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNG 932
                 +S + A  R ++N+     +   ++ +  FY P++    D++ +Y RWI      
Sbjct: 597  ---PYSSDLEAVLRFLTNLCRVNDNRDARLNFRLFYWPEITDYVDVQQEYLRWIMAE--- 650

Query: 933  STRDF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEV 991
            ST +F +CNYPF+FDA AKT+LL+ DQ +QM  AM+      F    N   ++QY+ + V
Sbjct: 651  STAEFNICNYPFLFDASAKTSLLQADQALQMHSAMSNALSNAFYNLLNYGHMSQYIVLNV 710

Query: 992  SRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLL 1051
            +R+N+V+D++REL +Y+ +D KKPLK+            KF GEEAEDAGGVR+EF MLL
Sbjct: 711  TRENLVQDSLRELQRYSQSDLKKPLKI------------KFHGEEAEDAGGVRKEFFMLL 758

Query: 1052 LKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEYEETR 1111
            LK+++DPKYGMFKE+E++R +WF++ TFE +NMYFL                        
Sbjct: 759  LKDLIDPKYGMFKEFEDSRVMWFADVTFETENMYFL------------------------ 794

Query: 1112 SIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                             IG LCGLAIYN+T+
Sbjct: 795  -----------------IGVLCGLAIYNFTI 808



 Score =  193 bits (491), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 131/394 (33%), Positives = 206/394 (52%), Gaps = 46/394 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL++ G+VF+WG +  GQLG  ++D+    +PK V+ L S +VVQ   G +H  
Sbjct: 94  GSRHSMALSEWGQVFSWGDNECGQLG-HASDQDIVKLPKIVRNLVSKTVVQIACGSNH-- 150

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS-IPKRVKGLASVSVVQAC 121
                     SLAL  CGE+++WG + +GQLG+ S +   QS  P R+  L  + V    
Sbjct: 151 ----------SLALTCCGELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIA 200

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCG----------SDPSQ-------GVQSNLVQDSHTT 164
            G +H  +++ S  V    + N CG          + P+Q       GV+     D  + 
Sbjct: 201 CGGNHSFLISKSSAVFGWGR-NNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSV 259

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
             ++   G ++T G   YGQ+G   S+  +  P+ V  L+   I+ +ACG  H+  L  S
Sbjct: 260 FLTIE--GGVFTCGAGAYGQLGHGFSSNEML-PRMVMELMGSTISQVACGNRHTLALVPS 316

Query: 225 VSRLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIA-SPVAMTAGEDSLVSHSGGLVVKKI 282
             R+Y FG+GS+ QL +  +     PQL+ GPW++ S   +    D+ ++     V+ +I
Sbjct: 317 RGRIYGFGLGSSGQLGTRNTKSLNLPQLVIGPWVSPSGSTLLQSNDAKIAS----VIHQI 372

Query: 283 YSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDL 342
           +SGGD SIVT +  +D +   D RV +P TQIL +  +  K+C R    +K D+  D DL
Sbjct: 373 FSGGDQSIVTTSMFADKIPPVDCRVYSPKTQILVLTADATKQCAR----IKKDDQSDLDL 428

Query: 343 LLYLETVFLSPGCMNGSFLQVENDEHFSCNSKKF 376
           L  +E +F S  C+NGSFL ++ D H  C+ + +
Sbjct: 429 LNSIEVIFKSQACLNGSFL-LDQDRHLGCSVRNY 461



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 120/265 (45%), Gaps = 80/265 (30%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLW--- 71
           E++ WG  +HGQLGL   +++    P R+      +V Q   G+ H L LT++  ++   
Sbjct: 2   ELYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACG 61

Query: 72  -----------------------------------HSLALNDCGEVFTWGGDTHGQLGLE 96
                                              HS+AL++ G+VF+WG +  GQLG  
Sbjct: 62  SNDYSQLGHELPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQLG-H 120

Query: 97  SADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN 156
           ++D+    +PK V+ L S +VVQ   G +H L LT                         
Sbjct: 121 ASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCC----------------------- 157

Query: 157 LVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN--TTVTKPQRVESLVNLPIALIACG 214
                          GELY+WG+N YGQ+G+++ N       P R+ +L+ +P++ IACG
Sbjct: 158 ---------------GELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACG 202

Query: 215 ANHSFVLSKSVSRLYAFGIGSAVQL 239
            NHSF++SKS S ++ +G  +  QL
Sbjct: 203 GNHSFLISKS-SAVFGWGRNNCGQL 226



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/102 (54%), Positives = 77/102 (75%), Gaps = 4/102 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+      E+E++R +WF++ TFE +NM FLIG LCGLAIYN+TIIN+PFPLALYKK
Sbjct: 765 PKYGM----FKEFEDSRVMWFADVTFETENMYFLIGVLCGLAIYNFTIINLPFPLALYKK 820

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
           +L +P+ L DL+++SPT A S+Q +LDY   D ++ F +TF 
Sbjct: 821 LLKKPVDLSDLREMSPTEANSMQALLDYTGDDFKETFDLTFE 862



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 74/113 (65%), Gaps = 7/113 (6%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLV-SN 476
           +E +F S  C+NGSFL ++ D H  C+ +N G+D+   Q  +D + ++E +S++ ++  N
Sbjct: 432 IEVIFKSQACLNGSFL-LDQDRHLGCSVRNYGIDLMAAQAAFDNLRKVENQSIKQVIWDN 490

Query: 477 LAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           L+       L+ SL  +P D E++R++L LPLYHEF+N + ++ LH+PFA A+
Sbjct: 491 LS-----KELLGSLVASPADVESMRVYLLLPLYHEFVNSKHYKTLHVPFAQAI 538



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 114/237 (48%), Gaps = 45/237 (18%)

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
           E++ WG  +HGQLGL   +++    P R+      +V Q   G+ H L LT+SG V    
Sbjct: 2   ELYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVY--- 58

Query: 141 KENGCGSD----------PSQGVQSNLVQDSHTT--------ITSLNSPGELYTWGNNEY 182
               CGS+            + +Q   +QD   T          +L+  G++++WG+NE 
Sbjct: 59  ---ACGSNDYSQLGHELPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNEC 115

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL--D 240
           GQ+G  +    V  P+ V +LV+  +  IACG+NHS  L+     LY++G     QL   
Sbjct: 116 GQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALT-CCGELYSWGSNLYGQLGVS 174

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSS 297
           SP  + ++          +P+ +T    +L+    G+ V  I  GG+HS + ++KSS
Sbjct: 175 SPNDLQQS---------NTPMRLT----TLL----GIPVSAIACGGNHSFL-ISKSS 213


>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
          Length = 1039

 Score =  197 bits (501), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/314 (38%), Positives = 171/314 (54%), Gaps = 51/314 (16%)

Query: 801  REPDLEDVFGITFRN-----------WYLLMSDDYFERLILIFKQCLIYLLQQPGVVDST 849
            R P+L+  F   F N           W+   S DYFE L+ IFK  ++Y L QP V   T
Sbjct: 515  RHPELQGPFAEAFNNLSTHPQRIVQLWWEAQSTDYFEMLVDIFKSVIVYELMQPVV--RT 572

Query: 850  NGDITFNRKLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYM 909
               I F + +   +Q+L  L SLN    T           N + P      K+    FY+
Sbjct: 573  IKKIYFTKSM---VQILNTLTSLNKINFT-----------NPKNP------KIPAECFYI 612

Query: 910  PDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQT 969
             +L    DI  DY  W+S +   S++  LCNY F+FD + K+ LL++DQ++QM+ A+N  
Sbjct: 613  ENLCNYVDIAADYINWLSDQ--DSSQPHLCNYAFLFDVQCKSLLLKIDQQVQMQIAVNLV 670

Query: 970  NFYLFLQTFNPHTL----NQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIY 1025
               +F + F   T     +Q+L + VSR+++V DT+ +++ + T+  KKPL+V       
Sbjct: 671  TTQIFSRLFMDPTYEYQRDQFLILTVSRNHLVRDTMLQISNHDTSQLKKPLRV------- 723

Query: 1026 LAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMY 1085
                 +F GEEAEDAGGV++EF MLLLKEI DP YGMFK+ EET  IWFS + FED+ MY
Sbjct: 724  -----EFVGEEAEDAGGVKKEFFMLLLKEIFDPVYGMFKQSEETNMIWFSNNPFEDEVMY 778

Query: 1086 FLIGKEYVPCTYIS 1099
            +LIG  Y    Y S
Sbjct: 779  YLIGAIYGLAIYNS 792



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 190/386 (49%), Gaps = 47/386 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL HS+AL++ G+ F+WG D+ GQLG  +    +Q  PK +K LA+ +V+Q   G  H +
Sbjct: 96  GLQHSMALDEWGQPFSWGSDSMGQLG-SNLGSHAQDKPKIIKTLATKNVIQVACGSYHTV 154

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           VLT+             G+++ WG +++GQ GL +   K ++ P+ +  +  + +     
Sbjct: 155 VLTNN------------GDLYAWGANSYGQCGLGNRSNK-ETTPQALSSILGIPIALIAC 201

Query: 123 GYSHCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNL-----VQDSHTTITS-----L 168
           G +H   L+ SG V      +H + G     S+   ++L     V+  H +        L
Sbjct: 202 GSNHTFALSQSGAVFGWGKNSHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFL 261

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
              G ++T G  EYGQ G  N+   +  P++V  L+   +  +ACG  H  +L +   R+
Sbjct: 262 TLDGGVFTCGAGEYGQTGHGNTKDELV-PRKVMELMGSTVTQVACGRRH--MLCRVGERI 318

Query: 229 YAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
            A G G+  QL  P   H    L+      +PV  T  ++S  S        K+++GGDH
Sbjct: 319 LACGYGARGQLGCP---HMAFALV-----PTPVTFTPNDESPFSPEIFSGPVKVFAGGDH 370

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           S + +          D RV + + QIL ++  +L  C       K+++ + QDL+ YLET
Sbjct: 371 SFLILNSEKSPA---DSRVADASKQILSLSNAKLVPCLV----FKNNDVVSQDLMAYLET 423

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           VF S GC+N SFL  +N  HF CN+K
Sbjct: 424 VFGSLGCINSSFLLPQNG-HFGCNTK 448



 Score =  122 bits (307), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 118/240 (49%), Gaps = 57/240 (23%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLE--SADKKSQSIPKRVKGLASVSVVQACAGYS 59
            G +H+L L++ G ++T G +  GQLG +  SAD  S  +    KG              
Sbjct: 42  AGEFHTLYLSNNGHLYTCGSNEVGQLGRQTNSADGTSPVLVDTFKG-------------- 87

Query: 60  HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ 119
            C + T   GL HS+AL++ G+ F+WG D+ GQLG  +    +Q  PK +K LA+ +V+Q
Sbjct: 88  -CTLSTIACGLQHSMALDEWGQPFSWGSDSMGQLG-SNLGSHAQDKPKIIKTLATKNVIQ 145

Query: 120 ACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGN 179
              G  H +VLT++                                      G+LY WG 
Sbjct: 146 VACGSYHTVVLTNN--------------------------------------GDLYAWGA 167

Query: 180 NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           N YGQ G+ N +   T PQ + S++ +PIALIACG+NH+F LS+S   ++ +G  S  QL
Sbjct: 168 NSYGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQS-GAVFGWGKNSHGQL 226



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 55/113 (48%), Positives = 75/113 (66%), Gaps = 5/113 (4%)

Query: 417 YLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSN 476
           YLETVF S GC+N SFL  +N  HF CN+K PGVD++  ++ +  I+RIE  +++ L+ N
Sbjct: 420 YLETVFGSLGCINSSFLLPQNG-HFGCNTKVPGVDLKKAEEAFTLISRIENLTIQELIFN 478

Query: 477 LAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
                   +++K +  +PPDAEALR+FL LPLYHE  NPR+H  L  PFA A 
Sbjct: 479 NLT----ENIIKKVKVSPPDAEALRVFLLLPLYHEMRNPRRHPELQGPFAEAF 527



 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 52/95 (54%), Positives = 69/95 (72%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  + EET  IWFS + FED+ M +LIG + GLAIYN  II +PFPL LYKK+L E +
Sbjct: 753 YGMFKQSEETNMIWFSNNPFEDEVMYYLIGAIYGLAIYNSIIIYVPFPLVLYKKLLGESV 812

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L DL DL PTLA +L+ +LDY + D+E+VF + F
Sbjct: 813 MLDDLSDLYPTLASNLKHLLDYPDEDVEEVFSLCF 847


>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
 gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
          Length = 1052

 Score =  193 bits (491), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 130/395 (32%), Positives = 203/395 (51%), Gaps = 46/395 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL + G++ +WG +  GQ+G  S D     +PK ++ L S +VVQ   G +H L
Sbjct: 94  GSRHSMALTEWGQILSWGDNDCGQVG-HSTDNDVIELPKILRFLVSRTVVQIACGNNHSL 152

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLES-ADKKSQSIPKRVKGLASVSVVQAC 121
            LTS            CGE+++WG + +GQLG++S  D    + P R+  +  + +    
Sbjct: 153 ALTS------------CGELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIA 200

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCG----------SDPSQ-------GVQSNLVQDSHTT 164
            G +H  +++ S  V    K N CG          + PSQ       GV+     D ++ 
Sbjct: 201 CGGNHSFLISKSSAVFGWGK-NTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSV 259

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              L + G ++T G   YGQ+G   SN  +  P+ V  L+   I  +ACG  H+  L  S
Sbjct: 260 F--LTNEGGVFTCGAGNYGQLGHGVSNNEMI-PRMVIELMGSTITQVACGNRHTLALVPS 316

Query: 225 VSRLYAFGIGSAVQLDSPKSVHKT-PQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
             R+Y+FG+G++ QL +  ++ +T P+++ GPW+ SP      E S       +V++KI+
Sbjct: 317 GGRVYSFGLGASGQLGTRNTISQTLPKVVIGPWV-SPSGSALMESS-EGADKSVVIRKIF 374

Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLL 343
           SGGD SIVT T   D V  +D R  NP +QIL +  E  ++C    +        D DLL
Sbjct: 375 SGGDQSIVTTTFYVDKVPPEDLRSYNPKSQILSLTAEATQKCAHIKQS-------DLDLL 427

Query: 344 LYLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSF 378
             +E +F S  C+NGSFL + ND+HF C+++ +  
Sbjct: 428 QSMEVIFKSQACLNGSFL-LSNDKHFGCSARNYGL 461



 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 116/339 (34%), Positives = 171/339 (50%), Gaps = 87/339 (25%)

Query: 813  FRNWYLLMSDDYFERLILIFKQCLIY-------LLQQPGVVDSTNGDITFNRKLSFCLQV 865
               W      DYFERL+ IF   +I+       L+     ++S+   + +N  L   L+V
Sbjct: 547  LHKWLAQTPVDYFERLVNIFLHVVIHIISFKMGLMATSPTLESSQELMPYNADLDVILKV 606

Query: 866  LQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRW 925
            +  L  +NN                          +V+Y  FY P+L    +++ ++ +W
Sbjct: 607  MNVLFIINNSR----------------------KERVSYQIFYWPELDWYVNVKQEFVKW 644

Query: 926  ISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAM-NQTNFYLFLQTFN-PHTL 983
            I G PN  +   +CN+ F+FDA AKT++L+ DQ +QM  AM N  N       FN    +
Sbjct: 645  IMGSPNEFS---ICNFSFLFDASAKTSMLQADQVVQMHSAMANAANNQGIFNLFNYGMPI 701

Query: 984  NQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGV 1043
            + Y+ + V+R+N+V+D++REL  Y+ +D KKPLK+            KF+ EEAEDAGGV
Sbjct: 702  SHYIVLNVTRENLVQDSLRELQHYSQSDLKKPLKI------------KFQDEEAEDAGGV 749

Query: 1044 RREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSM 1103
            R+EF MLLLK++LDPKY MFKE EE+R +WF++ T+E +NMY+L                
Sbjct: 750  RKEFFMLLLKDLLDPKYSMFKELEESRVLWFADVTYETENMYYL---------------- 793

Query: 1104 FKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                     IG LCGLAIYN+T+
Sbjct: 794  -------------------------IGVLCGLAIYNFTI 807



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 52/91 (57%), Positives = 69/91 (75%)

Query: 724 EYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDL 783
           E EE+R +WF++ T+E +NM +LIG LCGLAIYN+TIIN+PFPLALYKK+L++P+ L DL
Sbjct: 771 ELEESRVLWFADVTYETENMYYLIGVLCGLAIYNFTIINLPFPLALYKKLLNKPVDLSDL 830

Query: 784 KDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
           + LSP  A SLQ +LDY   +  D F + F 
Sbjct: 831 RQLSPAEANSLQALLDYDGENFSDTFELNFE 861



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 118/244 (48%), Gaps = 40/244 (16%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           ++ WG  +HGQLGL   + +   +P +++      V Q   G+ H L LT+         
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTAN-------- 54

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
               G+V+  G + H QLG E   K+   IP+    L +  V+Q   G  H + LT  G 
Sbjct: 55  ----GQVYACGNNDHHQLGHELPTKRPLPIPE----LQAYVVIQIACGSRHSMALTEWGQ 106

Query: 136 VTCTHKENGCGSDPSQG--------------VQSNLVQ----DSHTTITSLNSPGELYTW 177
           +  +  +N CG                    V   +VQ    ++H+   +L S GELY+W
Sbjct: 107 I-LSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHS--LALTSCGELYSW 163

Query: 178 GNNEYGQMGINNSNTT--VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
           G+N YGQ+G+ +         P R+ +++ +P+A IACG NHSF++SKS S ++ +G  +
Sbjct: 164 GSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKS-SAVFGWGKNT 222

Query: 236 AVQL 239
             QL
Sbjct: 223 CGQL 226



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 72/112 (64%), Gaps = 5/112 (4%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           +E +F S  C+NGSFL + ND+HF C+++N G+D++  +  +D +  +E ES++ ++ + 
Sbjct: 430 MEVIFKSQACLNGSFL-LSNDKHFGCSARNYGLDLKAAEVAFDHLRSVENESIKQVIWDN 488

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
                   L+ SL  +P D E+LR++L LPLYHEFMN + ++ L  P A A+
Sbjct: 489 VT----KELITSLVASPADKESLRVYLLLPLYHEFMNSKHYKTLQAPLASAI 536



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 45/236 (19%)

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHK 141
           ++ WG  +HGQLGL   + +   +P +++      V Q   G+ H L LT++G V     
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVY---- 58

Query: 142 ENGCGSDPSQGVQSNLVQDSHTTITSLNSP------------------GELYTWGNNEYG 183
              CG++    +   L       I  L +                   G++ +WG+N+ G
Sbjct: 59  --ACGNNDHHQLGHELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCG 116

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG--IGSAVQLDS 241
           Q+G +  N  +  P+ +  LV+  +  IACG NHS  L+ S   LY++G  I   + + S
Sbjct: 117 QVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALT-SCGELYSWGSNIYGQLGVQS 175

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSS 297
           PK +         P   +P+ +T           G+ +  I  GG+HS + ++KSS
Sbjct: 176 PKDL---------PHSNAPLRLTT--------ILGIPLATIACGGNHSFL-ISKSS 213


>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
 gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
          Length = 1052

 Score =  193 bits (491), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 130/395 (32%), Positives = 204/395 (51%), Gaps = 46/395 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL + G++ +WG +  GQ+G  S D     +PK ++ L S +VVQ   G +H L
Sbjct: 94  GSRHSMALTEWGQILSWGDNDCGQVG-HSTDNDVIELPKILRFLVSRTVVQIACGNNHSL 152

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLES-ADKKSQSIPKRVKGLASVSVVQAC 121
            LTS            CGE+++WG + +GQLG++S  D    + P R+  +  + +    
Sbjct: 153 ALTS------------CGELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIA 200

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCG----------SDPSQ-------GVQSNLVQDSHTT 164
            G +H  +++ S  V    K N CG          + PSQ       GV+     D ++ 
Sbjct: 201 CGGNHSFLISKSSAVFGWGK-NTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSV 259

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              L + G ++T G   YGQ+G   SN  +  P+ V  L+   I  +ACG  H+  L  S
Sbjct: 260 F--LTNEGGVFTCGAGNYGQLGHGASNNEMI-PRMVIELMGSTITQVACGNRHTLALVPS 316

Query: 225 VSRLYAFGIGSAVQLDSPKSVHKT-PQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
             R+Y+FG+G++ QL +  ++ +T P+++ GPW+ SP      E S  +    +V++KI+
Sbjct: 317 GGRVYSFGLGASGQLGTRNTISQTLPKVVIGPWV-SPNGSALMESSEGADKS-VVIRKIF 374

Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLL 343
           SGGD SIVT T   D V  +D R  NP +QIL +  E  ++C    +        D DLL
Sbjct: 375 SGGDQSIVTTTFYVDKVPPEDLRSYNPKSQILSLTAEATQKCAHIKQS-------DLDLL 427

Query: 344 LYLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSF 378
             +E +F S  C+NGSFL + ND+HF C+++ +  
Sbjct: 428 QSMEVIFKSQACLNGSFL-LSNDKHFGCSARNYGL 461



 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/339 (34%), Positives = 171/339 (50%), Gaps = 87/339 (25%)

Query: 813  FRNWYLLMSDDYFERLILIFKQCLIY-------LLQQPGVVDSTNGDITFNRKLSFCLQV 865
               W      DYFERL+ IF   +I+       L+     ++S+   + +N  L   L+V
Sbjct: 547  LHKWLAQTPVDYFERLVNIFLHVVIHIISFKMGLMATSPTLESSQELMPYNADLDVILKV 606

Query: 866  LQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRW 925
            +  L  +NN                          +V+Y  FY P+L    +++ ++ +W
Sbjct: 607  MNVLFIINNSR----------------------KERVSYQIFYWPELDWYVNVKQEFVKW 644

Query: 926  ISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAM-NQTNFYLFLQTFN-PHTL 983
            I G PN  +   +CN+ F+FDA AKT++L+ DQ +QM  AM N  N       FN    +
Sbjct: 645  IMGSPNEFS---ICNFSFLFDASAKTSMLQADQVVQMHSAMANAANNQGIFNLFNYGMPI 701

Query: 984  NQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGV 1043
            + Y+ + V+R+N+V+D++REL  Y+ +D KKPLK+            KF+ EEAEDAGGV
Sbjct: 702  SHYIVLNVTRENLVQDSLRELQHYSQSDLKKPLKI------------KFQDEEAEDAGGV 749

Query: 1044 RREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSM 1103
            R+EF MLLLK++LDPKY MFKE EE+R +WF++ T+E +NMY+L                
Sbjct: 750  RKEFFMLLLKDLLDPKYSMFKELEESRLLWFADVTYETENMYYL---------------- 793

Query: 1104 FKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                     IG LCGLAIYN+T+
Sbjct: 794  -------------------------IGVLCGLAIYNFTI 807



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/91 (57%), Positives = 69/91 (75%)

Query: 724 EYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDL 783
           E EE+R +WF++ T+E +NM +LIG LCGLAIYN+TIIN+PFPLALYKK+L++P+ L DL
Sbjct: 771 ELEESRLLWFADVTYETENMYYLIGVLCGLAIYNFTIINLPFPLALYKKLLNKPVDLSDL 830

Query: 784 KDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
           + LSP  A SLQ +LDY   +  D F + F 
Sbjct: 831 RQLSPAEANSLQALLDYDGDNFSDTFELNFE 861



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 118/244 (48%), Gaps = 40/244 (16%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           ++ WG  +HGQLGL   + +   +P +++      V Q   G+ H L LT+         
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTAN-------- 54

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
               G+V+  G + H QLG E   K+   IP+    L +  V+Q   G  H + LT  G 
Sbjct: 55  ----GQVYACGNNDHHQLGHELPTKRPLPIPE----LQAYVVIQIACGSRHSMALTEWGQ 106

Query: 136 VTCTHKENGCGSDPSQG--------------VQSNLVQ----DSHTTITSLNSPGELYTW 177
           +  +  +N CG                    V   +VQ    ++H+   +L S GELY+W
Sbjct: 107 I-LSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHS--LALTSCGELYSW 163

Query: 178 GNNEYGQMGINNSNTT--VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
           G+N YGQ+G+ +         P R+ +++ +P+A IACG NHSF++SKS S ++ +G  +
Sbjct: 164 GSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKS-SAVFGWGKNT 222

Query: 236 AVQL 239
             QL
Sbjct: 223 CGQL 226



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 72/112 (64%), Gaps = 5/112 (4%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           +E +F S  C+NGSFL + ND+HF C+++N G+D++  +  +D +  +E ES++ ++ + 
Sbjct: 430 MEVIFKSQACLNGSFL-LSNDKHFGCSARNYGLDLKAAEVAFDHLRSVENESIKQVIWDN 488

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
                   L+ SL  +P D E+LR++L LPLYHEFMN + ++ L  P A A+
Sbjct: 489 VT----KELITSLVASPADKESLRVYLLLPLYHEFMNSKHYKTLQAPLASAI 536



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 45/236 (19%)

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHK 141
           ++ WG  +HGQLGL   + +   +P +++      V Q   G+ H L LT++G V     
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVY---- 58

Query: 142 ENGCGSDPSQGVQSNLVQDSHTTITSLNSP------------------GELYTWGNNEYG 183
              CG++    +   L       I  L +                   G++ +WG+N+ G
Sbjct: 59  --ACGNNDHHQLGHELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCG 116

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG--IGSAVQLDS 241
           Q+G +  N  +  P+ +  LV+  +  IACG NHS  L+ S   LY++G  I   + + S
Sbjct: 117 QVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALT-SCGELYSWGSNIYGQLGVQS 175

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSS 297
           PK +         P   +P+ +T           G+ +  I  GG+HS + ++KSS
Sbjct: 176 PKDL---------PHSNAPLRLTT--------ILGIPLATIACGGNHSFL-ISKSS 213


>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
 gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
          Length = 1058

 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/396 (33%), Positives = 202/396 (51%), Gaps = 46/396 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL++ G+V +WG +  GQLG ++ D+    +PK V+ L S +VVQ   G +H L
Sbjct: 98  GSRHSMALSEWGQVLSWGDNDCGQLG-QATDQDIVQLPKIVRQLVSKTVVQIACGNNHSL 156

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS-IPKRVKGLASVSVVQAC 121
            LTS            CGE+++WG + +GQLG+ +  + + S  P R+  L  + V    
Sbjct: 157 ALTS------------CGELYSWGSNIYGQLGVNTPKEVTHSNQPVRLTTLLGIPVAAIA 204

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCG----------SDPSQ-------GVQSNLVQDSHTT 164
            G +H  +++ S  V    + N CG          S P+Q       GV+     D  + 
Sbjct: 205 CGGNHSFIISKSSAVFGWGRNN-CGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEFSV 263

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              L + G ++T G   YGQ+G +        P+ V  L+   I  +ACG  H+  L  S
Sbjct: 264 F--LTNEGGVFTCGAGAYGQLG-HGFGANEMLPRMVMELMGSTITQVACGNRHTLALVPS 320

Query: 225 VSRLYAFGIGSAVQLDSPKSVHKT-PQLIHGPWIA-SPVAMTAGEDSLVSHSGGLVVKKI 282
             R+Y FG+GS+ QL +  +   T PQ++ GPW++ S  A+    D+ VS    +V+ +I
Sbjct: 321 RGRVYGFGLGSSGQLGTRSTKSLTLPQVVIGPWVSPSGSALLQSSDAKVS----VVIHQI 376

Query: 283 YSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDL 342
           +SGGD S VT T   D V  +D R   P +QIL +  E  K+C R     K ++  D DL
Sbjct: 377 FSGGDQSFVTTTLFVDKVPPEDLRNYKPKSQILALTEEVTKQCTR----FKQNDQSDLDL 432

Query: 343 LLYLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSF 378
           L  +E +F S  C+N SFL ++ND HF C+ + +  
Sbjct: 433 LNSIELIFKSQACLNASFL-LDNDRHFGCSVRNYGL 467



 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/335 (33%), Positives = 170/335 (50%), Gaps = 85/335 (25%)

Query: 816  WYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGD-------ITFNRKLSFCLQVLQK 868
            W      DYFE ++  F   +I+++     + + N         + +N +L   L+++Q 
Sbjct: 556  WLAQTPADYFEHIVQNFLHVVIHIISFKMGLAAVNPAAERHQRLLPYNSELETILKMMQT 615

Query: 869  LNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISG 928
            L  +NN             + ++R         + Y  FY PDL+   D++ +Y +WI  
Sbjct: 616  LCLINN-------------LRDVR---------LNYQLFYWPDLSDYADVQQEYVKWIMA 653

Query: 929  RPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFN-PHTLNQYL 987
              + ++   +CN+ F+FD  AKT LL+ DQ +QM  AM       F    N    ++ ++
Sbjct: 654  --DTASEFNICNFSFLFDPSAKTALLQADQALQMHSAMANAASNAFYNLLNYGLPVSHFI 711

Query: 988  EVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREF 1047
             + V+R+N+V+D++REL +Y+  D KKPLK+            KF GEEAEDAGGVR+EF
Sbjct: 712  VLNVTRENLVQDSLRELQRYSQTDLKKPLKI------------KFHGEEAEDAGGVRKEF 759

Query: 1048 LMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEY 1107
             MLLLK++LDPKYGMFKEYE++R IWF++ +FE +NMYFL                    
Sbjct: 760  FMLLLKDLLDPKYGMFKEYEDSRLIWFADLSFETENMYFL-------------------- 799

Query: 1108 EETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                 IG LCGLAIYN+T+
Sbjct: 800  ---------------------IGVLCGLAIYNFTI 813



 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/96 (60%), Positives = 75/96 (78%), Gaps = 1/96 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  EYE++R IWF++ +FE +NM FLIG LCGLAIYN+TIIN+PFPLAL+KK+L +P+
Sbjct: 772 YGMFKEYEDSRLIWFADLSFETENMYFLIGVLCGLAIYNFTIINLPFPLALFKKLLAKPV 831

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
            L DL+ LSP  A S+Q ILDY   D +DVF +TF 
Sbjct: 832 DLSDLRQLSPAEANSMQSILDYEGEDFKDVFDLTFE 867



 Score =  116 bits (291), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 118/265 (44%), Gaps = 80/265 (30%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTST------- 67
           E++ WG  +HGQLGL   + +    P +V      ++ Q   G+ H L LTS+       
Sbjct: 6   ELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGRVYACG 65

Query: 68  -------------------------------TGLWHSLALNDCGEVFTWGGDTHGQLGLE 96
                                           G  HS+AL++ G+V +WG +  GQLG +
Sbjct: 66  SNDHSQLGHDLPTKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGDNDCGQLG-Q 124

Query: 97  SADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN 156
           + D+    +PK V+ L S +VVQ   G +H L LTS                        
Sbjct: 125 ATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSC----------------------- 161

Query: 157 LVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN--TTVTKPQRVESLVNLPIALIACG 214
                          GELY+WG+N YGQ+G+N     T   +P R+ +L+ +P+A IACG
Sbjct: 162 ---------------GELYSWGSNIYGQLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACG 206

Query: 215 ANHSFVLSKSVSRLYAFGIGSAVQL 239
            NHSF++SKS S ++ +G  +  QL
Sbjct: 207 GNHSFIISKS-SAVFGWGRNNCGQL 230



 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 73/113 (64%), Gaps = 7/113 (6%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLV-SN 476
           +E +F S  C+N SFL ++ND HF C+ +N G+D++  Q  +D +  +E ES++ ++  N
Sbjct: 436 IELIFKSQACLNASFL-LDNDRHFGCSVRNYGLDLKAAQLAFDHLRNVENESIKQVIWEN 494

Query: 477 LAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +        L+ SL  +P D E++R++L LPLYHEF+N + ++ L +PFA A+
Sbjct: 495 IT-----KDLIGSLVASPADVESMRLYLLLPLYHEFVNSKHYKSLQVPFANAI 542



 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 45/237 (18%)

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
           E++ WG  +HGQLGL   + +    P +V      ++ Q   G+ H L LTSSG V    
Sbjct: 6   ELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGRVY--- 62

Query: 141 KENGCGSDPSQGVQSNLVQDSHTTI------------------TSLNSPGELYTWGNNEY 182
               CGS+    +  +L       I                   +L+  G++ +WG+N+ 
Sbjct: 63  ---ACGSNDHSQLGHDLPTKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGDNDC 119

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG--IGSAVQLD 240
           GQ+G       V  P+ V  LV+  +  IACG NHS  L+ S   LY++G  I   + ++
Sbjct: 120 GQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALT-SCGELYSWGSNIYGQLGVN 178

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSS 297
           +PK V  + Q         PV +T    +L+    G+ V  I  GG+HS + ++KSS
Sbjct: 179 TPKEVTHSNQ---------PVRLT----TLL----GIPVAAIACGGNHSFI-ISKSS 217


>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
 gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
          Length = 1055

 Score =  189 bits (479), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/339 (35%), Positives = 173/339 (51%), Gaps = 87/339 (25%)

Query: 816  WYLLMSDDYFERLILIFKQCLIYLL-------QQP-GVVDSTNGDITFNRKLSFCLQVLQ 867
            W+   S +YFER++   K  ++Y++       + P G       ++ ++  L+  L +L 
Sbjct: 547  WWANQSREYFERMVENCKSVVLYIINFKFPRVESPAGAEKPHQQELRYDPHLAAMLDMLA 606

Query: 868  KLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWIS 927
             L  +N++  T                     +K+ Y  F++ ++  + DIR DYFRW +
Sbjct: 607  VLYWINHQKRT---------------------QKLPYEQFHINEIDDLIDIRQDYFRWTT 645

Query: 928  GRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLN--- 984
                G T   LCNYPF+F+A AK  LL+ DQ +QM  AM       +L        N   
Sbjct: 646  -DAKGVTFS-LCNYPFVFNASAKMLLLQTDQAMQMYQAMQSAATASWLSMLYSPAANSAA 703

Query: 985  -QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGV 1043
             QY+ + V+R+NIV+DTIREL+ Y  +D KKP+K+            KF GEEAEDAGGV
Sbjct: 704  CQYIVLNVTRENIVQDTIRELSHYAASDLKKPIKI------------KFCGEEAEDAGGV 751

Query: 1044 RREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSM 1103
            R+EF MLLL++ILDPKYGMFK +EE+ +IWF+ED F+                       
Sbjct: 752  RKEFFMLLLRDILDPKYGMFKSFEESNAIWFTEDYFD----------------------- 788

Query: 1104 FKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                        S+D+     M+ LIG LCGLAIYN+T+
Sbjct: 789  ------------SDDS-----MFALIGILCGLAIYNFTI 810



 Score =  179 bits (454), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 193/388 (49%), Gaps = 46/388 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL + G+VF+WG +  GQLG   A+   Q  P+ +K + +  VVQ  +G  HCL
Sbjct: 97  GTAHSLALTNWGQVFSWGSNAVGQLG-HDAENGRQPTPRMIKAIGAKHVVQIASGQYHCL 155

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            LT+             GE++ WG +++GQLG+ +  +K   +P  ++ LA V +     
Sbjct: 156 ALTNN------------GELYAWGSNSYGQLGIGTTSEKV-PMPTLIQSLAGVPIAFIAC 202

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN------------- 169
           G +H   ++ SG +    K N  G      + S        T+ SL              
Sbjct: 203 GGNHSFAVSKSGAIFGWGK-NTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVF 261

Query: 170 --SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
             + G ++T G   +GQ+G  + +  +  P++V  L+   I  IACG  H+     S  +
Sbjct: 262 LTNEGGVFTCGAGTFGQLGHGSCSNEIV-PRKVFELMGSKITQIACGRRHTLAFVPSRGK 320

Query: 228 LYAFGIGSAVQLD-SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           +Y FG+G   QL       H TPQ++ GPW  +    +  +++ +      +V +I+SGG
Sbjct: 321 IYGFGLGGVGQLGIGMVGNHSTPQIVRGPWFKTDFKSSDCDETQI------IVNRIFSGG 374

Query: 287 DHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYL 346
           D   V++    +   S DFRV + +TQIL ++ E  K    E+ +++ ++T++ D++  +
Sbjct: 375 DQCFVSLLGGDE---SADFRVYDDSTQILSLSLEMGK----ELAKIEPEQTVELDVISSV 427

Query: 347 ETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           ET+F S  C+NGS L + ND H  C SK
Sbjct: 428 ETIFKSLACLNGSLL-LPNDAHLCCTSK 454



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 114/265 (43%), Gaps = 81/265 (30%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS--------- 66
           ++ WG   HG+LGL   +++   +P+++    +  VV+   G SH L LT          
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62

Query: 67  --------------------------------TTGLWHSLALNDCGEVFTWGGDTHGQLG 94
                                           + G  HSLAL + G+VF+WG +  GQLG
Sbjct: 63  NDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQLG 122

Query: 95  LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQ 154
              A+   Q  P+ +K + +  VVQ  +G  HCL LT++G                    
Sbjct: 123 -HDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNG-------------------- 161

Query: 155 SNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACG 214
                             ELY WG+N YGQ+GI  ++  V  P  ++SL  +PIA IACG
Sbjct: 162 ------------------ELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACG 203

Query: 215 ANHSFVLSKSVSRLYAFGIGSAVQL 239
            NHSF +SKS   ++ +G  +  QL
Sbjct: 204 GNHSFAVSKS-GAIFGWGKNTFGQL 227



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/114 (52%), Positives = 81/114 (71%), Gaps = 10/114 (8%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFE-DQNMCFLIGTLCGLAIYNYTIINMPFPLALYK 771
           PK G+       +EE+ +IWF+ED F+ D +M  LIG LCGLAIYN+TII +PFPLALYK
Sbjct: 766 PKYGM----FKSFEESNAIWFTEDYFDSDDSMFALIGILCGLAIYNFTIIALPFPLALYK 821

Query: 772 KILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYF 825
           K+L E + ++DL+DL+PT+A+S+Q ILDY   DLE+VF + F       + DYF
Sbjct: 822 KLLGEEVDMKDLRDLAPTVARSMQSILDYEGGDLEEVFDLCFTT-----TRDYF 870



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 51/112 (45%), Positives = 76/112 (67%), Gaps = 5/112 (4%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           +ET+F S  C+NGS L + ND H  C SK+PGVDM   ++ +D I +IERES+R L+ + 
Sbjct: 427 VETIFKSLACLNGSLL-LPNDAHLCCTSKHPGVDMGAAEETFDQIRKIERESIRQLIRD- 484

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +  + L+ +L  +P D E LR++L LPLYHEF+NP+ ++ LH PF+ A+
Sbjct: 485 ---SIESDLLGALTASPADVETLRIYLLLPLYHEFINPKHYQKLHAPFSKAV 533


>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
 gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
          Length = 1060

 Score =  189 bits (479), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/339 (35%), Positives = 173/339 (51%), Gaps = 87/339 (25%)

Query: 816  WYLLMSDDYFERLILIFKQCLIYLL-------QQP-GVVDSTNGDITFNRKLSFCLQVLQ 867
            W+   S +YFER++   K  ++Y++       + P G       ++ ++  L+  L +L 
Sbjct: 552  WWANQSREYFERMVENCKSVVLYIINFKFPRVESPAGAEKPHQQELRYDPHLAAMLDMLA 611

Query: 868  KLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWIS 927
             L  +N++  T                     +K+ Y  F++ ++  + DIR DYFRW +
Sbjct: 612  VLYWINHQKRT---------------------QKLPYEQFHINEIDDLIDIRQDYFRWTT 650

Query: 928  GRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLN--- 984
                G T   LCNYPF+F+A AK  LL+ DQ +QM  AM       +L        N   
Sbjct: 651  D-AKGVTFS-LCNYPFVFNASAKMLLLQTDQAMQMYQAMQSAATASWLSMLYSPAANSAA 708

Query: 985  -QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGV 1043
             QY+ + V+R+NIV+DTIREL+ Y  +D KKP+K+            KF GEEAEDAGGV
Sbjct: 709  CQYIVLNVTRENIVQDTIRELSHYAASDLKKPIKI------------KFCGEEAEDAGGV 756

Query: 1044 RREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSM 1103
            R+EF MLLL++ILDPKYGMFK +EE+ +IWF+ED F+                       
Sbjct: 757  RKEFFMLLLRDILDPKYGMFKSFEESNAIWFTEDYFD----------------------- 793

Query: 1104 FKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                        S+D+     M+ LIG LCGLAIYN+T+
Sbjct: 794  ------------SDDS-----MFALIGILCGLAIYNFTI 815



 Score =  179 bits (454), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 193/388 (49%), Gaps = 46/388 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL + G+VF+WG +  GQLG   A+   Q  P+ +K + +  VVQ  +G  HCL
Sbjct: 102 GTAHSLALTNWGQVFSWGSNAVGQLG-HDAENGRQPTPRMIKAIGAKHVVQIASGQYHCL 160

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            LT+             GE++ WG +++GQLG+ +  +K   +P  ++ LA V +     
Sbjct: 161 ALTNN------------GELYAWGSNSYGQLGIGTTSEKV-PMPTLIQSLAGVPIAFIAC 207

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN------------- 169
           G +H   ++ SG +    K N  G      + S        T+ SL              
Sbjct: 208 GGNHSFAVSKSGAIFGWGK-NTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVF 266

Query: 170 --SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
             + G ++T G   +GQ+G  + +  +  P++V  L+   I  IACG  H+     S  +
Sbjct: 267 LTNEGGVFTCGAGTFGQLGHGSCSNEIV-PRKVFELMGSKITQIACGRRHTLAFVPSRGK 325

Query: 228 LYAFGIGSAVQLD-SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           +Y FG+G   QL       H TPQ++ GPW  +    +  +++ +      +V +I+SGG
Sbjct: 326 IYGFGLGGVGQLGIGMVGNHSTPQIVRGPWFKTDFKSSDCDETQI------IVNRIFSGG 379

Query: 287 DHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYL 346
           D   V++    +   S DFRV + +TQIL ++ E  K    E+ +++ ++T++ D++  +
Sbjct: 380 DQCFVSLLGGDE---SADFRVYDDSTQILSLSLEMGK----ELAKIEPEQTVELDVISSV 432

Query: 347 ETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           ET+F S  C+NGS L + ND H  C SK
Sbjct: 433 ETIFKSLACLNGSLL-LPNDAHLCCTSK 459



 Score =  120 bits (301), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 114/237 (48%), Gaps = 48/237 (20%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+L L   G+++  G + HGQLG +       ++P +   ++    + +   Y   +
Sbjct: 44  GTSHTLFLTKEGKMYACGNNDHGQLGHDL-----DTLPNKRPRMSRFKRLTSLENY---I 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           +   + G  HSLAL + G+VF+WG +  GQLG   A+   Q  P+ +K + +  VVQ  +
Sbjct: 96  ITCISCGTAHSLALTNWGQVFSWGSNAVGQLG-HDAENGRQPTPRMIKAIGAKHVVQIAS 154

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  HCL LT++G                                      ELY WG+N Y
Sbjct: 155 GQYHCLALTNNG--------------------------------------ELYAWGSNSY 176

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           GQ+GI  ++  V  P  ++SL  +PIA IACG NHSF +SKS   ++ +G  +  QL
Sbjct: 177 GQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKS-GAIFGWGKNTFGQL 232



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/114 (52%), Positives = 81/114 (71%), Gaps = 10/114 (8%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFE-DQNMCFLIGTLCGLAIYNYTIINMPFPLALYK 771
           PK G+       +EE+ +IWF+ED F+ D +M  LIG LCGLAIYN+TII +PFPLALYK
Sbjct: 771 PKYGM----FKSFEESNAIWFTEDYFDSDDSMFALIGILCGLAIYNFTIIALPFPLALYK 826

Query: 772 KILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYF 825
           K+L E + ++DL+DL+PT+A+S+Q ILDY   DLE+VF + F       + DYF
Sbjct: 827 KLLGEEVDMKDLRDLAPTVARSMQSILDYEGGDLEEVFDLCFTT-----TRDYF 875



 Score =  110 bits (274), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 51/112 (45%), Positives = 76/112 (67%), Gaps = 5/112 (4%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           +ET+F S  C+NGS L + ND H  C SK+PGVDM   ++ +D I +IERES+R L+ + 
Sbjct: 432 VETIFKSLACLNGSLL-LPNDAHLCCTSKHPGVDMGAAEETFDQIRKIERESIRQLIRD- 489

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +  + L+ +L  +P D E LR++L LPLYHEF+NP+ ++ LH PF+ A+
Sbjct: 490 ---SIESDLLGALTASPADVETLRIYLLLPLYHEFINPKHYQKLHAPFSKAV 538


>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
          Length = 1049

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/388 (33%), Positives = 199/388 (51%), Gaps = 38/388 (9%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LA+N+ G++F+WG + +GQLGL S D  ++ +P+ +K L +  +VQ   G  H  
Sbjct: 92  GNCHTLAVNEWGQLFSWGCNMNGQLGLNSVDC-TERVPRMIKVLGTNVIVQIACGTEH-- 148

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVV-QAC 121
                     S+AL + GE++ WG +  GQLGL S    ++  PKR+  LA+V +   AC
Sbjct: 149 ----------SIALTNDGELYAWGSNREGQLGLGSY-TTTEIKPKRISTLAAVPIAFIAC 197

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITS-------------- 167
            GY H +V++ SG V  +   N  G      VQ   +     T+ +              
Sbjct: 198 GGY-HTIVISKSGAVF-SWGRNTFGQLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSV 255

Query: 168 -LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            L   G ++T G   YGQ+G  N+   +  P++V  L+   +  I+CG  H+  L  S  
Sbjct: 256 FLTMDGGVFTCGAGMYGQLGHGNTTNEIL-PRQVMELMGSTVTQISCGKRHTLALVPSRG 314

Query: 227 RLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           R+YA+G+G A QL +  S   T   +     +SP   +   D   S     VVK I+SGG
Sbjct: 315 RVYAWGLGGAGQLGNRASQSATTPQVVLGPWSSPSGSSVMLDLHYSPQIDCVVKHIFSGG 374

Query: 287 DHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYL 346
           DH  VT++   D +   D R+L P +QIL V  E+L EC++    +     ++ +L+ YL
Sbjct: 375 DHCFVTISHKKDNIEPSDCRILGPTSQILTVMEEKLAECQK----IPPGSPVNHELMTYL 430

Query: 347 ETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           ETVF S  C+N SFL + ND H+ C+SK
Sbjct: 431 ETVFKSQACINASFL-LSNDAHYGCSSK 457



 Score =  182 bits (462), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 104/281 (37%), Positives = 153/281 (54%), Gaps = 45/281 (16%)

Query: 816  WYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNE 875
            W+      YFERL+ ++K  +++ ++Q                 S   + +    SL   
Sbjct: 550  WWSSAPPYYFERLVRMYKSVVLHFVKQ-----------------STADKAIMWTESLQCA 592

Query: 876  TLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNG-ST 934
                 +      ++ IR P         +  F++ +L+   DI  +Y +W++        
Sbjct: 593  LQLLGLLYKLNIIAGIRVP---------HETFHLSELSEYVDIAHEYCKWLTEEDRSFYH 643

Query: 935  RDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQT------NFYLFLQTFNPHTLNQYLE 988
            + + CNYPF+FDA+AKT LLE DQ IQM+ AMN+       +  L   + N    +Q++ 
Sbjct: 644  KIYFCNYPFLFDAEAKTKLLETDQSIQMQTAMNEVASRVVRDIMLGTPSLNFQQYSQFVI 703

Query: 989  VEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFL 1048
            + VSR+NIV DT+ +L +Y +N+ K+PL+V            KFR EEAED GGVR+EF 
Sbjct: 704  LHVSRNNIVNDTLDQLLKYDSNELKRPLRV------------KFRDEEAEDVGGVRKEFF 751

Query: 1049 MLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            MLL  EILD KYGMF+EYEETR+IWFS D+ E++ MYFLIG
Sbjct: 752  MLLFAEILDFKYGMFQEYEETRTIWFSSDSLEEEVMYFLIG 792



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 56/96 (58%), Positives = 77/96 (80%), Gaps = 1/96 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  EYEETR+IWFS D+ E++ M FLIG LCGLAIYN+ IIN+PFPL +YKK+L E +
Sbjct: 763 YGMFQEYEETRTIWFSSDSLEEEVMYFLIGVLCGLAIYNFVIINLPFPLVMYKKLLGESV 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
            L D+K++SPT+A+SL+ +L+Y E D E+V+G+ F 
Sbjct: 823 GLSDIKEMSPTIARSLESVLEYNESDFEEVYGLCFE 858



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 118/234 (50%), Gaps = 56/234 (23%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +++A+   G+V++ G + +GQLG E A K+ Q IP    GL +    +   G  +C    
Sbjct: 45  YTVAITKEGKVYSCGNNDYGQLGHEKARKRLQLIP----GLDAFVFRKIACG--NC---- 94

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 H+LA+N+ G++F+WG + +GQLGL S D  ++ +P+ +K L +  +VQ   G  
Sbjct: 95  ------HTLAVNEWGQLFSWGCNMNGQLGLNSVDC-TERVPRMIKVLGTNVIVQIACGTE 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           H + LT+ G                                      ELY WG+N  GQ+
Sbjct: 148 HSIALTNDG--------------------------------------ELYAWGSNREGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           G+ +  TT  KP+R+ +L  +PIA IACG  H+ V+SKS   ++++G  +  QL
Sbjct: 170 GLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVISKS-GAVFSWGRNTFGQL 222



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 5/113 (4%)

Query: 417 YLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSN 476
           YLETVF S  C+N SFL + ND H+ C+SK+ G+++      +  I+ ++  +++ L+  
Sbjct: 429 YLETVFKSQACINASFL-LSNDAHYGCSSKHHGINIDYTIRLFGIISELDNSTIQELI-- 485

Query: 477 LAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
                    L+ S  ++PPD E+LR++LTLPLYH F N   +  L  PF  A+
Sbjct: 486 --FACVTESLIPSFVDSPPDVESLRVYLTLPLYHRFANLSNYSSLQTPFCKAV 536


>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
 gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
          Length = 1054

 Score =  187 bits (474), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/308 (36%), Positives = 168/308 (54%), Gaps = 40/308 (12%)

Query: 784  KDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFERLILI--FKQCLIYLLQ 841
            K L    AK++  + +     L+  +  T   +Y  M ++Y   ++ I  FK  L  L  
Sbjct: 528  KSLHVPFAKAIFRLTENPHKVLKKWWSQTPMEYYEHMVNNYLHVVVHIVSFKMGLSVLNH 587

Query: 842  QPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRK 901
            Q   +++    + +N +L   L++LQ L+ +NNE                         +
Sbjct: 588  Q--ALETQQRLLPYNLELEVILRLLQYLSVINNER----------------------EER 623

Query: 902  VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQ 961
            + Y  F+  +L+   D++ +Y RWI           +CN+PF+ +A AKTT+L+ DQ  Q
Sbjct: 624  LNYQLFHWTELSDYVDVQREYVRWIISENQNEFN--ICNFPFLLNASAKTTMLQADQAWQ 681

Query: 962  MEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDT 1021
            M  AM   +    L  +   T++ Y+ + VSRDNIV+D++REL +Y+  D KKPLK+   
Sbjct: 682  MHSAMTSASLSFDLLNYGLPTISHYIVLNVSRDNIVQDSLRELQRYSLGDLKKPLKI--- 738

Query: 1022 SPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFED 1081
                     KF GEEAEDAGGVR+EF MLLLK+++DPKYGMFK +EETR +WF++ TFE 
Sbjct: 739  ---------KFHGEEAEDAGGVRKEFFMLLLKDLVDPKYGMFKVFEETRLLWFADLTFET 789

Query: 1082 QNMYFLIG 1089
            + MY+LIG
Sbjct: 790  ETMYYLIG 797



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/392 (33%), Positives = 198/392 (50%), Gaps = 46/392 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL + G+V +WG +  GQLG +S D+    +PK ++ L S  VVQ   G +H L
Sbjct: 94  GSRHSMALTEWGQVLSWGDNDCGQLG-QSTDQSIIELPKIIRSLVSKHVVQIACGNNHSL 152

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQAC 121
            LTS            CGE+++WG + +GQLG++   + S  + P R+  L  + +    
Sbjct: 153 ALTS------------CGELYSWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIA 200

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCG----------SDPSQ-------GVQSNLVQDSHTT 164
            G +H  +++ S  V    + N CG          + P+Q       GV+     D  + 
Sbjct: 201 CGGNHSFLISKSSAVFGFGR-NNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSV 259

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              L + G ++T G   YGQ+G + SNT    P+ V  L+   I  +ACG  H+  L  S
Sbjct: 260 F--LTNEGGVFTCGAGTYGQLG-HGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPS 316

Query: 225 VSRLYAFGIGSAVQLDSPKSVHKT-PQLIHGPWIA-SPVAMTAGEDSLVSHSGGLVVKKI 282
             R+Y FG+GS+ QL +  +   T PQ + GPW++ S  A+    D+  S    +V+ +I
Sbjct: 317 RGRVYGFGLGSSGQLGNRSTNSVTLPQEVLGPWVSPSDSALLQSNDAKAS----VVIHQI 372

Query: 283 YSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDL 342
           +SGGD SIVT T  +D V   D R     +QIL +  E   +C R     K  +  D DL
Sbjct: 373 FSGGDQSIVTTTLFADKVSPADLRHYKTKSQILTLTAEATNQCTR----FKEGDQCDLDL 428

Query: 343 LLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           L  +E +F S  C+N SFL + ND+H +C+ +
Sbjct: 429 LNSMELIFKSQACLNASFL-LANDKHVACSIR 459



 Score =  113 bits (283), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 54/96 (56%), Positives = 72/96 (75%), Gaps = 1/96 (1%)

Query: 720 YGITE-YEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ + +EETR +WF++ TFE + M +LIG LCGLAIYN+ IINMPFPLALYKK+L + +
Sbjct: 768 YGMFKVFEETRLLWFADLTFETETMYYLIGILCGLAIYNFIIINMPFPLALYKKLLGKNV 827

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
            L DL++LSPT A SL  +LDY   + E+ F +TF 
Sbjct: 828 DLSDLRELSPTEANSLHALLDYNGDNFEETFDLTFE 863



 Score =  108 bits (271), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 114/265 (43%), Gaps = 80/265 (30%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLW--- 71
           ++F WG  +HGQLG+   + +   IP ++       + Q   G+ H L LT+   ++   
Sbjct: 2   DLFCWGNASHGQLGMGGIEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYACG 61

Query: 72  -----------------------------------HSLALNDCGEVFTWGGDTHGQLGLE 96
                                              HS+AL + G+V +WG +  GQLG +
Sbjct: 62  NNDQAQLGHNLPTKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDCGQLG-Q 120

Query: 97  SADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN 156
           S D+    +PK ++ L S  VVQ   G +H L LTS                        
Sbjct: 121 STDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTSC----------------------- 157

Query: 157 LVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN--TTVTKPQRVESLVNLPIALIACG 214
                          GELY+WG+N YGQ+G+      +    P R+ +L+ +P+A IACG
Sbjct: 158 ---------------GELYSWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIACG 202

Query: 215 ANHSFVLSKSVSRLYAFGIGSAVQL 239
            NHSF++SKS S ++ FG  +  QL
Sbjct: 203 GNHSFLISKS-SAVFGFGRNNCGQL 226



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 73/112 (65%), Gaps = 5/112 (4%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           +E +F S  C+N SFL + ND+H +C+ +N G+D++  Q  +D + ++E E ++ ++ + 
Sbjct: 432 MELIFKSQACLNASFL-LANDKHVACSIRNHGLDLKAAQLAFDNLRKVENEGIKQVIWDN 490

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
                   L+ SL  +P D E++R++L LPLYHE++N + ++ LH+PFA A+
Sbjct: 491 VT----KELIGSLVASPADVESMRVYLLLPLYHEYVNSKHYKSLHVPFAKAI 538



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 41/235 (17%)

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
           ++F WG  +HGQLG+   + +   IP ++       + Q   G+ H L LT++G V    
Sbjct: 2   DLFCWGNASHGQLGMGGIEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVY--- 58

Query: 141 KENGCGSDPSQGVQSNLVQDSHTTI------------------TSLNSPGELYTWGNNEY 182
               CG++    +  NL       I                   +L   G++ +WG+N+ 
Sbjct: 59  ---ACGNNDQAQLGHNLPTKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDC 115

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +   + +  P+ + SLV+  +  IACG NHS  L+ S   LY++G     QL   
Sbjct: 116 GQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALT-SCGELYSWGSNIYGQL--- 171

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSS 297
             V    +L H  +   P+ +T    +L+    G+ +  I  GG+HS + ++KSS
Sbjct: 172 -GVKPPQELSHCNY---PLRLT----TLL----GIPLATIACGGNHSFL-ISKSS 213


>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Monodelphis domestica]
          Length = 1049

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/390 (33%), Positives = 194/390 (49%), Gaps = 45/390 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG DT GQLGL   ++  + +P+ +K L  + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIK-VPRNIKSLTDIQIVQIACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF+WG + HGQLGL   + KSQS P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKGSEVFSWGQNKHGQLGL-GFELKSQSAPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQ-------------DSHTTI 165
           G +H  VLT SG +    + N  G    +D +     NL++             + HT  
Sbjct: 198 GGAHSFVLTLSGAIFGWGR-NKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHT-- 254

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S 
Sbjct: 255 AALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSS 313

Query: 226 SRLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYS 284
            R+Y+FG+G   QL +   S  K+P  + G W   P +     +S  +      VKKI+S
Sbjct: 314 GRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF--PYSGKCSSNS--NDEEYFCVKKIFS 369

Query: 285 GGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLL 344
           GGD S    +   +    DDFR L+P+ QI  +N   ++          S      ++  
Sbjct: 370 GGDQSFSHYSCPQNIGPPDDFRCLDPSKQIWTINESLIQRWLS-----YSSGRFPLEIAN 424

Query: 345 YLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
            ++  F S  C+NGSFL V ND+H+   SK
Sbjct: 425 EIDGTFSSAACLNGSFLAVSNDDHYRTGSK 454



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 167/336 (49%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVQLFKEVVVHLLKLYKIGIPPSERRVFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N  T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNERT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   +    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GMLTEIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 789

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 790  ----------------------IGVICGLAIYNFTI 803



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG DT GQLGL   ++  + +P+ +K L  + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDTDGQLGLPGTEEYIK-VPRNIKSLTDIQIVQIAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+                                         E+++WG N++
Sbjct: 145 GYYHSLALSKGS--------------------------------------EVFSWGQNKH 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+     + + PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 94.4 bits (233), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+ED F + F
Sbjct: 816 LLKKKPTLDDLKELMPDVGRSMQQLLDYPEDDIEDTFCLNF 856



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 100/240 (41%), Gaps = 65/240 (27%)

Query: 19  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALND 78
           WG  + GQLGL   D++    P++     +  V     G            L H++ + D
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCG------------LRHTVFVLD 51

Query: 79  CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC 138
            G V+T G +  GQLG E + KK    P++V  L + ++V    G +H L          
Sbjct: 52  DGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTL---------- 97

Query: 139 THKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQ 198
                                       +LN  G++Y WG +  GQ+G+  +   +  P+
Sbjct: 98  ----------------------------ALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPR 129

Query: 199 RVESLVNLPIALIACGANHSFVLSKSVSRLYAFG------IGSAVQLDSPKSVHKTPQLI 252
            ++SL ++ I  IACG  HS  LSK  S ++++G      +G   +L S       PQLI
Sbjct: 130 NIKSLTDIQIVQIACGYYHSLALSKG-SEVFSWGQNKHGQLGLGFELKS----QSAPQLI 184


>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Monodelphis domestica]
          Length = 1057

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/390 (33%), Positives = 194/390 (49%), Gaps = 45/390 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG DT GQLGL   ++  + +P+ +K L  + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIK-VPRNIKSLTDIQIVQIACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF+WG + HGQLGL   + KSQS P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKGSEVFSWGQNKHGQLGL-GFELKSQSAPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQ-------------DSHTTI 165
           G +H  VLT SG +    + N  G    +D +     NL++             + HT  
Sbjct: 198 GGAHSFVLTLSGAIFGWGR-NKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHT-- 254

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S 
Sbjct: 255 AALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSS 313

Query: 226 SRLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYS 284
            R+Y+FG+G   QL +   S  K+P  + G W   P +     +S  +      VKKI+S
Sbjct: 314 GRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF--PYSGKCSSNS--NDEEYFCVKKIFS 369

Query: 285 GGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLL 344
           GGD S    +   +    DDFR L+P+ QI  +N   ++          S      ++  
Sbjct: 370 GGDQSFSHYSCPQNIGPPDDFRCLDPSKQIWTINESLIQRWLS-----YSSGRFPLEIAN 424

Query: 345 YLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
            ++  F S  C+NGSFL V ND+H+   SK
Sbjct: 425 EIDGTFSSAACLNGSFLAVSNDDHYRTGSK 454



 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 167/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVQLFKEVVVHLLKLYKIGIPPSERRVFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N  T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNERT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDINHGLTELTEIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 798  ------------------------------IGVICGLAIYNFTI 811



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG DT GQLGL   ++  + +P+ +K L  + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDTDGQLGLPGTEEYIK-VPRNIKSLTDIQIVQIAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+                                         E+++WG N++
Sbjct: 145 GYYHSLALSKGS--------------------------------------EVFSWGQNKH 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+     + + PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 94.4 bits (233), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+ED F + F
Sbjct: 824 LLKKKPTLDDLKELMPDVGRSMQQLLDYPEDDIEDTFCLNF 864



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 100/240 (41%), Gaps = 65/240 (27%)

Query: 19  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALND 78
           WG  + GQLGL   D++    P++     +  V     G            L H++ + D
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCG------------LRHTVFVLD 51

Query: 79  CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC 138
            G V+T G +  GQLG E + KK    P++V  L + ++V    G +H L          
Sbjct: 52  DGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTL---------- 97

Query: 139 THKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQ 198
                                       +LN  G++Y WG +  GQ+G+  +   +  P+
Sbjct: 98  ----------------------------ALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPR 129

Query: 199 RVESLVNLPIALIACGANHSFVLSKSVSRLYAFG------IGSAVQLDSPKSVHKTPQLI 252
            ++SL ++ I  IACG  HS  LSK  S ++++G      +G   +L S       PQLI
Sbjct: 130 NIKSLTDIQIVQIACGYYHSLALSKG-SEVFSWGQNKHGQLGLGFELKS----QSAPQLI 184


>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
 gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
          Length = 1052

 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 165/337 (48%), Gaps = 85/337 (25%)

Query: 813  FRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGD-------ITFNRKLSFCLQV 865
               W+     +YFE ++  F    ++++     ++  N +       + +N  L   L++
Sbjct: 549  LEKWWGQTPSEYFEHMVNSFLHVAMHIISFKMGIEVINTNEPRQKRVLPYNSDLETVLRL 608

Query: 866  LQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRW 925
            L  L  +N++                         ++ Y  F+ PDL+   D++ +Y  W
Sbjct: 609  LAHLCHVNDQR----------------------DERLNYQLFHWPDLSDYVDVQQEYLSW 646

Query: 926  ISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQ 985
            I    N      +C +PF+FDA AKT LL+ DQ +Q   AM+      F   F    ++Q
Sbjct: 647  IMSDSNEFN---ICKFPFLFDASAKTALLQADQMLQKHSAMSNAVSNAFYNLFQYGHVSQ 703

Query: 986  YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
            Y+ + V+R+N+V+D++REL +YT  D KKPLK+            KF+ EEAEDAGGVR+
Sbjct: 704  YIVLNVTRENLVQDSLRELERYTQMDLKKPLKI------------KFQNEEAEDAGGVRK 751

Query: 1046 EFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFK 1105
            EF MLLLK+++DPKYGMFKE+E++  +WF++ TFE +NMYFL                  
Sbjct: 752  EFFMLLLKDLIDPKYGMFKEFEDSHVMWFADITFESENMYFL------------------ 793

Query: 1106 EYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                   IG LCGLAIYN+T+
Sbjct: 794  -----------------------IGVLCGLAIYNFTI 807



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 201/396 (50%), Gaps = 46/396 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL + G+V +WG +  GQLG  ++D+    +PK V+ L S +VVQ   G +H  
Sbjct: 94  GSRHSMALTEWGQVLSWGDNECGQLG-HASDQDVVQLPKTVRALVSKTVVQIACGNNH-- 150

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQAC 121
                     SLAL  CGE++ WG + +GQLG+++  +  Q + P  +  L  + V    
Sbjct: 151 ----------SLALTCCGELYAWGSNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIA 200

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCG----------SDPSQ-------GVQSNLVQDSHTT 164
            G +H  +++ S  V    + N CG          + P+Q       GV+     D  + 
Sbjct: 201 CGGNHSFLISKSSAVFGWGR-NNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSV 259

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              L + G ++T G   YGQ+G       +  P+ V  L+   I+ +ACG  H+  +  +
Sbjct: 260 F--LTNEGGVFTCGAGAYGQLGHGFCGNEML-PRMVMELMGSTISQVACGNRHTLAMVPA 316

Query: 225 VSRLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIA-SPVAMTAGEDSLVSHSGGLVVKKI 282
             R+Y FG+GS+ QL +  +     PQ++ GPW++ S  A+    D+ ++    +V+++I
Sbjct: 317 RGRIYGFGLGSSGQLGTRNTKSLNLPQMVIGPWVSPSGSALLQSSDAQIA----VVIRQI 372

Query: 283 YSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDL 342
           +SGGD SIVT +   D     D R   P +QIL +  E   +C R     K D+  D DL
Sbjct: 373 FSGGDQSIVTTSLYVDKKPPVDCRFYEPKSQILVLTAEATSQCAR----FKEDDQSDLDL 428

Query: 343 LLYLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSF 378
           L  +E +F S  C+NGSFL ++ D+HF C+++ +  
Sbjct: 429 LNSMELIFKSQACLNGSFL-LKQDKHFGCSARNYGL 463



 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 109/239 (45%), Gaps = 58/239 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+L L   G+V+  G + + QLG E + K+   IP+ V                 C+
Sbjct: 44  GHRHTLFLTASGKVYACGSNDYAQLGHELSSKRPLQIPELVD----------------CV 87

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           +     G  HS+AL + G+V +WG +  GQLG  ++D+    +PK V+ L S +VVQ   
Sbjct: 88  ITQIACGSRHSMALTEWGQVLSWGDNECGQLG-HASDQDVVQLPKTVRALVSKTVVQIAC 146

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H L LT                                        GELY WG+N Y
Sbjct: 147 GNNHSLALTCC--------------------------------------GELYAWGSNIY 168

Query: 183 GQMGINNSNT--TVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           GQ+G+   +       P  + +L+ +P+  IACG NHSF++SKS S ++ +G  +  QL
Sbjct: 169 GQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKS-SAVFGWGRNNCGQL 226



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/102 (54%), Positives = 76/102 (74%), Gaps = 4/102 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+      E+E++  +WF++ TFE +NM FLIG LCGLAIYN+TIIN+PFPLALYKK
Sbjct: 764 PKYGM----FKEFEDSHVMWFADITFESENMYFLIGVLCGLAIYNFTIINLPFPLALYKK 819

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
           +L +P+ L DL+++SPT A S+Q +LDY   + ED F +TF 
Sbjct: 820 LLKKPVDLSDLREMSPTEANSMQALLDYEGDNFEDTFDLTFE 861



 Score = 96.3 bits (238), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 75/112 (66%), Gaps = 7/112 (6%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLV-SN 476
           +E +F S  C+NGSFL ++ D+HF C+++N G+D++  Q  +D +  +E +S++ ++  N
Sbjct: 432 MELIFKSQACLNGSFL-LKQDKHFGCSARNYGLDLKAAQLAFDNLREVENQSIKQVIWDN 490

Query: 477 LAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGA 528
           L        L+ SL  +P D E++R++L LPLYHEF+N + ++ LH+PFA A
Sbjct: 491 LT-----KELLGSLVPSPADVESMRLYLLLPLYHEFVNSKHYKTLHVPFANA 537


>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
          Length = 1059

 Score =  183 bits (464), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 104/277 (37%), Positives = 157/277 (56%), Gaps = 37/277 (13%)

Query: 816  WYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFN-RKLSFCLQVLQKLNSLNN 874
            W+  +   +F+R++ IFKQ  + +L+ P +  ++N ++      L   L+VL+KLN++N+
Sbjct: 559  WWGSLKPRFFKRILGIFKQTALLILRLPNLPATSNMEVMIRFESLKASLEVLKKLNNVND 618

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWI-SGRPNGS 933
                                  + G+ + Y  FY+P++  + DIR DY  W+  G+   S
Sbjct: 619  ----------------------YNGQIIPYDNFYIPEVTDIVDIRKDYVNWVHRGKTLPS 656

Query: 934  TRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP-HTLNQYLEVEVS 992
             +   C+YPFIFDA AK+ LL+ D  +QM+ A  +     F   F P   +N  L + V+
Sbjct: 657  PQLHFCDYPFIFDASAKSVLLQTDACMQMQSAYEEVQRRNFQNLFLPIDPINPMLILHVT 716

Query: 993  RDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLL 1052
            R NIV DT+++L++    D KKPLKV             F  EEA D GGVR+EF +LL+
Sbjct: 717  RHNIVTDTLQQLSRQGPADLKKPLKV------------IFVNEEAIDEGGVRKEFFLLLM 764

Query: 1053 KEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            KEILDPKYGMFK +EE+R  WF+ ++FED+ M+ LIG
Sbjct: 765  KEILDPKYGMFKFFEESRLQWFNPNSFEDKQMFHLIG 801



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 125/386 (32%), Positives = 193/386 (50%), Gaps = 42/386 (10%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           SL +   GEVF+WG +  GQLG     K+ +  PK +K LA  +VVQ   G +HCL LT 
Sbjct: 105 SLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALT- 163

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
                      D G +F+WG + +GQLGL S+       P+++  L  + + Q  +G +H
Sbjct: 164 -----------DDGRLFSWGCNKYGQLGLGSS-HSFHDTPQQIVCLRGIPIAQIASGGNH 211

Query: 127 CLVLTSSGVVTCTHKENG----------------CGSDPSQGVQSNLVQDSHTTITSLNS 170
             +LT S  V    K +                 C S  +Q V      + HT   +L  
Sbjct: 212 SFILTWSRAVFGWGKNSFGQLGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHTV--ALTK 269

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
            G ++++G   +GQ+G N++   +  P+RV  L+   I+ +ACG  H+   S S  ++YA
Sbjct: 270 EGGVFSFGAGGFGQLGHNSTQNEIL-PKRVMELMGSVISQVACGRRHTVAFSPSSGKMYA 328

Query: 231 FGIGSAVQLDSPK-SVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGL-VVKKIYSGGDH 288
           FG G + QL     S   +P  I  P   S     +    ++ H G L +VK +YSGGDH
Sbjct: 329 FGSGGSGQLGLGDTSARNSPFPILSPNFPSTGRRLS---QVMDHDGSLYLVKHLYSGGDH 385

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
            ++    +  G   DDFR ++P+TQI  +  E+   CE+ ++ L+ D     +L+  +  
Sbjct: 386 CLLLARNAEMGGEPDDFREVDPSTQITTLTAEK---CEK-IKSLQLDVITPSELVDDVLK 441

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +F S  C+N SFL ++NDEHF C+SK
Sbjct: 442 IFSSSACLNASFL-LKNDEHFGCSSK 466



 Score =  152 bits (383), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 151/553 (27%), Positives = 244/553 (44%), Gaps = 78/553 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP--KRVKGLASVSVVQACAGYSH 60
           G  H+L +   G++++ G + +G+LG      ++ SI   + V  L+S+ V+QA  G   
Sbjct: 45  GEKHTLIVTKDGKLYSCGSNEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEF 104

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
            LV+T+             GEVF+WG +  GQLG     K+ +  PK +K LA  +VVQ 
Sbjct: 105 SLVITT------------AGEVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQI 152

Query: 121 CAGYSHCLVLTSSGVV---TCT-HKENGCGSDPS-QGVQSNLVQDSHTTITSLNSPGE-- 173
             G +HCL LT  G +    C  + + G GS  S       +V      I  + S G   
Sbjct: 153 TCGANHCLALTDDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHS 212

Query: 174 --------LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
                   ++ WG N +GQ+G+N+     + P   +SL N  +  I+CG +H+  L+K  
Sbjct: 213 FILTWSRAVFGWGKNSFGQLGLNDEYDK-SHPTLCKSLRNQKVMYISCGEDHTVALTKE- 270

Query: 226 SRLYAFGIGSAVQLDSPKSVHKT-PQLIHGPW--IASPVAMTAGEDSLVSHSGGLVVKKI 282
             +++FG G   QL    + ++  P+ +      + S VA         S S G    K+
Sbjct: 271 GGVFSFGAGGFGQLGHNSTQNEILPKRVMELMGSVISQVACGRRHTVAFSPSSG----KM 326

Query: 283 YSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDL 342
           Y+ G      +        +  F +L+P       NF       R + Q+     +D D 
Sbjct: 327 YAFGSGGSGQLGLGDTSARNSPFPILSP-------NF---PSTGRRLSQV-----MDHDG 371

Query: 343 LLYLETVFLSPG--CM---NGSFLQVENDEHFSCN-SKKFSFIKLSLINWFMKLHFSIFG 396
            LYL     S G  C+     + +  E D+    + S + + +          L   +  
Sbjct: 372 SLYLVKHLYSGGDHCLLLARNAEMGGEPDDFREVDPSTQITTLTAEKCEKIKSLQLDV-- 429

Query: 397 QGFGCVCPTVLGDCVPKSWLYLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQ 456
                + P+ L D V K       +F S  C+N SFL ++NDEHF C+SKN GVDM   +
Sbjct: 430 -----ITPSELVDDVLK-------IFSSSACLNASFL-LKNDEHFGCSSKNNGVDMDNVR 476

Query: 457 DCYDTIARIERESVRSLVSNLAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPR 516
              + IA  +  ++   ++     +    L++SL  +PPD EALR++L LP +H    P+
Sbjct: 477 KLMNRIADAKNVNIIQQITE----SIENRLLRSLPPSPPDVEALRVYLILPEFHLLYEPK 532

Query: 517 QHEILHMPFAGAL 529
               L  PF  ++
Sbjct: 533 FFSTLIGPFGKSI 545



 Score =  106 bits (264), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 50/102 (49%), Positives = 71/102 (69%), Gaps = 4/102 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  +    +EE+R  WF+ ++FED+ M  LIG +CGLAIYN TII + FPLALYKK
Sbjct: 770 PKYGMFKF----FEESRLQWFNPNSFEDKQMFHLIGAVCGLAIYNSTIIGLSFPLALYKK 825

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
           +L+    L+DL +L P++ + + D+LDY   D+EDVF +TF 
Sbjct: 826 LLNRKTTLEDLMELMPSVGRGMHDLLDYEGDDVEDVFCLTFE 867



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 41/231 (17%)

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTH 140
           VF WG    GQL +  +++ S   PK V  L  + + +   G  H L++T  G + +C  
Sbjct: 4   VFGWGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGS 63

Query: 141 KENG--CGSDP-SQGVQSNLVQ-----DSHTTITS---------LNSPGELYTWGNNEYG 183
            E G    S P S+ V  ++V+      S   I +         + + GE+++WG N+ G
Sbjct: 64  NEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKG 123

Query: 184 QMGINN-SNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ--LD 240
           Q+G    S     KP+ ++SL    +  I CGANH   L+    RL+++G     Q  L 
Sbjct: 124 QLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDD-GRLFSWGCNKYGQLGLG 182

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           S  S H TPQ I        V +            G+ + +I SGG+HS +
Sbjct: 183 SSHSFHDTPQQI--------VCLR-----------GIPIAQIASGGNHSFI 214


>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
          Length = 1270

 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/336 (35%), Positives = 170/336 (50%), Gaps = 86/336 (25%)

Query: 816  WYLLMSDDYFERLILIFKQCLIYLLQ---QPGVVDSTNGDITF-NRKLSFCLQVLQKLNS 871
            W+ L S DYFERL+   K  ++Y+++      V D     +   +  L   L ++  L  
Sbjct: 813  WWSLQSRDYFERLVECCKSVVLYIVRFKMPKAVTDREEWHVLRPDEHLMAMLDLMAILYW 872

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N+                         +K+AY  F++ ++A + D++ DY+RW     +
Sbjct: 873  INHTKRE---------------------QKLAYEQFHIGEIAELVDLQQDYYRWTL---D 908

Query: 932  GSTRDF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQ-TNFYLFLQTFNPH--TLNQYL 987
             + + F LCNY FIF+  AK  LL+ DQ +QM  A++  T   +    F P      Q++
Sbjct: 909  STGQSFALCNYAFIFNGAAKMLLLQTDQVLQMHKAIHTPTANSILPSLFFPSIPVAQQFI 968

Query: 988  EVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREF 1047
             + V+R+NIVEDTIREL+QY  ND KKP+K+            KF GEE EDAGGVR+EF
Sbjct: 969  VLNVTRENIVEDTIRELSQYGANDLKKPIKI------------KFFGEEGEDAGGVRKEF 1016

Query: 1048 LMLLLKEILDPKYGMFKEYEETRSIWFSEDTFE-DQNMYFLIGKEYVPCTYISKYSMFKE 1106
             MLLL++ILDPKYGMFK ++E+R+IWF+ED FE D  M+ L                   
Sbjct: 1017 FMLLLRDILDPKYGMFKSFDESRTIWFTEDYFEGDAGMFAL------------------- 1057

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG LCGLAIYN+T+
Sbjct: 1058 ----------------------IGILCGLAIYNFTI 1071



 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 145/548 (26%), Positives = 225/548 (41%), Gaps = 148/548 (27%)

Query: 39  IPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLG--LE 96
           +P+++  + +  + +A  G SH L+LT           ND G++++ G + HGQLG  +E
Sbjct: 337 VPRKMDWMHAKEIARAACGASHTLLLT-----------ND-GKMYSCGNNDHGQLGHDVE 384

Query: 97  SADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN 156
           S   K    P+ +  L +  + QAC G +H L LT+ G                      
Sbjct: 385 SLPNKR---PQLLTALENYIITQACCGTAHSLALTNWG---------------------- 419

Query: 157 LVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN 216
                           ++Y+WG+N  GQ+G     T    P+ + S+    +  IA G  
Sbjct: 420 ----------------QVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHY 463

Query: 217 HSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGG 276
           H   L+ S   LYA+G  +  QL    +  K         +++P        +LV    G
Sbjct: 464 HCLALTNS-GELYAWGSNAYGQLGLGMTNEK---------VSTP--------TLVQSLAG 505

Query: 277 LVVKKIYSGGDHSIVTVTKSSD--GVLSDDFRVLNPATQILDVNFERLKECEREVEQLKS 334
           + +  I  GG+HS   V+KS    G   + F  L     + D+N  +     R +  L  
Sbjct: 506 VPIAFIACGGNHSFA-VSKSGAIFGWGKNTFGQLG----LNDLNSRQFPTQLRTLRSLGV 560

Query: 335 DETLDQDLLLYLETVFLSPG-----CMNGSFLQVENDEHFSCNSKKFSFIKLSLIN---- 385
                 D      +VFL+ G     C  G+F Q+    H SCN++    +   L+     
Sbjct: 561 RYVSCGDDF----SVFLTAGGGVFTCGAGTFGQLG---HGSCNNEILPRMVFELMGSKIT 613

Query: 386 ----------WFMKLHFSIFGQGFGCVCPTVLG--------DCVPKSWL----------- 416
                      F+     I+G G   V    +G          V   W            
Sbjct: 614 QIACGRRHTLAFVPSRGKIYGFGLSGVGQLGIGIVGNYNTPQIVRGPWQSQILTFSVQMS 673

Query: 417 ------------------YLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDC 458
                              +ET+F S  C+NGS L + NDEHF C SK+PGVDM    + 
Sbjct: 674 EELAAIKPDDTVELDLMSAVETIFKSLACINGSLL-LPNDEHFCCTSKHPGVDMVAATEA 732

Query: 459 YDTIARIERESVRSLVSNLAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQH 518
           ++ + +IE ES+R L+ +    +    L+ SL  +P D E LR +L LPLYHEF NP+ +
Sbjct: 733 FEQVRKIEHESLRQLIRD----SITTDLLGSLLPSPADVETLRAYLLLPLYHEFCNPKHY 788

Query: 519 EILHMPFA 526
           ++LH PF+
Sbjct: 789 QLLHAPFS 796



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/239 (35%), Positives = 122/239 (51%), Gaps = 57/239 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLG--LESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           G  H+L L + G++++ G + HGQLG  +ES   K    P+ +  L +  + QAC G + 
Sbjct: 355 GASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKR---PQLLTALENYIITQACCGTA- 410

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                      HSLAL + G+V++WG +  GQLG E+ D   Q IP+ ++ +A+  VVQ 
Sbjct: 411 -----------HSLALTNWGQVYSWGSNAVGQLGQET-DTTRQIIPRLIRSIAAKQVVQI 458

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AG+ HCL LT+S                                      GELY WG+N
Sbjct: 459 AAGHYHCLALTNS--------------------------------------GELYAWGSN 480

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
            YGQ+G+  +N  V+ P  V+SL  +PIA IACG NHSF +SKS   ++ +G  +  QL
Sbjct: 481 AYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSKS-GAIFGWGKNTFGQL 538



 Score =  131 bits (329), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 168/389 (43%), Gaps = 93/389 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL + G+V++WG +  GQLG E+ D   Q IP+ ++ +A+  VVQ  AG+ HCL
Sbjct: 408 GTAHSLALTNWGQVYSWGSNAVGQLGQET-DTTRQIIPRLIRSIAAKQVVQIAAGHYHCL 466

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            LT++            GE++ WG + +GQLGL   ++K  S P  V+ LA V +     
Sbjct: 467 ALTNS------------GELYAWGSNAYGQLGLGMTNEKV-STPTLVQSLAGVPIAFIAC 513

Query: 123 GYSHCLVLTSSGVVTCTHKE-------NGCGSD--PSQ-------GVQSNLVQDSHTTIT 166
           G +H   ++ SG +    K        N   S   P+Q       GV+     D  +   
Sbjct: 514 GGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDDFSVF- 572

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            L + G ++T G   +GQ+G  + N  +  P+ V  L+   I  IACG  H+     S  
Sbjct: 573 -LTAGGGVFTCGAGTFGQLGHGSCNNEIL-PRMVFELMGSKITQIACGRRHTLAFVPSRG 630

Query: 227 RLYAFGIGSAVQLD-SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           ++Y FG+    QL       + TPQ++ GPW                             
Sbjct: 631 KIYGFGLSGVGQLGIGIVGNYNTPQIVRGPW----------------------------- 661

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
               I+T +      +S++   + P   +             E++ + + ET        
Sbjct: 662 -QSQILTFSVQ----MSEELAAIKPDDTV-------------ELDLMSAVET-------- 695

Query: 346 LETVFLSPGCMNGSFLQVENDEHFSCNSK 374
              +F S  C+NGS L + NDEHF C SK
Sbjct: 696 ---IFKSLACINGSLL-LPNDEHFCCTSK 720



 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 63/120 (52%), Positives = 83/120 (69%), Gaps = 10/120 (8%)

Query: 713  PKNGINHYGITEYEETRSIWFSEDTFE-DQNMCFLIGTLCGLAIYNYTIINMPFPLALYK 771
            PK G+       ++E+R+IWF+ED FE D  M  LIG LCGLAIYN+TII +PFPLALYK
Sbjct: 1027 PKYGM----FKSFDESRTIWFTEDYFEGDAGMFALIGILCGLAIYNFTIIALPFPLALYK 1082

Query: 772  KILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFERLILI 831
            K+L E + + DL++L PT+A+S+Q +LDY EPD+ DVF +TF       + DYF  L  I
Sbjct: 1083 KLLGEEVDMSDLRELMPTVARSMQSLLDYNEPDMADVFQLTFST-----TRDYFGELQTI 1137


>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
          Length = 1060

 Score =  181 bits (460), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/310 (36%), Positives = 162/310 (52%), Gaps = 50/310 (16%)

Query: 787  SPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVV 846
            SP   K LQ         L+        +WY  + D +F R++  +K+ +I+LL Q    
Sbjct: 536  SPDSYKDLQCPYASSVAALKAPASTILNHWYSSLPDTFFLRIVRAYKKTVIHLLSQ---- 591

Query: 847  DSTNGDITFNRKLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTA 906
                 D    + L  C+ +L K + +N +                       G  V YT 
Sbjct: 592  ---TPDPYSQKSLCHCMDLLDKFHKVNAQM----------------------GPGVPYTE 626

Query: 907  FYMPDLATVCDIRIDYFRWISGRPNGSTRDF-LCNYPFIFDAKAKTTLLEMDQRIQMEHA 965
            FY+ +L T  D   +Y RW+      S R F +C+YPF+FD KAKT LL++D  IQM+ A
Sbjct: 627  FYIHELDTKIDFHTEYIRWLQFHNRHSARSFSICDYPFVFDGKAKTLLLQIDAVIQMQVA 686

Query: 966  MNQ------TNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVN 1019
            +++      +NF L     +P  ++  L + V R NIV DTI +L +   +DFKKPLKV 
Sbjct: 687  VDEATRHTLSNFILGGGAIDP--MHPCLVLFVRRANIVMDTINQLDKQGHHDFKKPLKV- 743

Query: 1020 DTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTF 1079
                        F GEEA DAGGV++EF +LLL+EILDPKYGMF+ + ++R +WFS+++F
Sbjct: 744  -----------MFVGEEALDAGGVKKEFFLLLLREILDPKYGMFEYFPDSRQLWFSQESF 792

Query: 1080 EDQNMYFLIG 1089
            ED  MY LIG
Sbjct: 793  EDVCMYRLIG 802



 Score =  175 bits (443), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 197/404 (48%), Gaps = 42/404 (10%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HS  L D G+VFTWG +   QLG    D  S SIP+ V+GLA   VVQ   G +H 
Sbjct: 101 SGTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHT 160

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + LT+T            G+++TWG + HGQLGL  A+K  Q+ P+ V  ++ + +V+  
Sbjct: 161 VGLTAT------------GQIYTWGSNNHGQLGL--ANKTPQNEPQWVSCISGLPIVRVA 206

Query: 122 AGYSHCLVLTSSGVVTC----THKENGCGSDP------------SQGVQSNLVQDSHTTI 165
           AG  H LVLT SG +      +  + G G D             +QG+ +    D H+  
Sbjct: 207 AGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHS-- 264

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L   G ++T+G   YGQ+G N SN  +  P++V  L+   +  IACG  HS     S 
Sbjct: 265 LALTRDGGVFTFGAGMYGQLGHNTSNNELL-PRKVFELMGSSVTQIACGRKHSIAYVPSS 323

Query: 226 SRLYAFGIGSAVQLDSPKSVHK-TPQLIHGPWIASPVAMTAGEDSLVSHSGG--LVVKKI 282
            R+Y FG+G   QL +  +V++ +P ++ GP++A    +        S  G   +VV+ +
Sbjct: 324 GRVYVFGLGGNGQLGTGSTVNRMSPAMVKGPFVAFGAEVVDKGAIHFSQHGQPHMVVRHL 383

Query: 283 YSGGDHSIVTVTKSSDGVLSDDFRVLNPATQ-ILDVNFERLKECEREVEQLKSDETLDQD 341
           Y+GGD + +  T +S  V   D R+ NP  Q I+ ++    K+   ++ +  +      D
Sbjct: 384 YAGGDQTFIYATAASCKVPPHDCRI-NPLVQSIVRIS----KDVVADLSKTPAVTMPSVD 438

Query: 342 LLLYLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLSLIN 385
           LL  +  +F SP   N SFL    D      S+    + L   N
Sbjct: 439 LLQEITELFSSPYSWNASFLASFRDPEPCACSRDHHGVDLQSAN 482



 Score =  110 bits (276), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 51/96 (53%), Positives = 73/96 (76%), Gaps = 1/96 (1%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ EY  ++R +WFS+++FED  M  LIGT+CGLAIYN  II++ FPLALYKK+L   +
Sbjct: 773 YGMFEYFPDSRQLWFSQESFEDVCMYRLIGTVCGLAIYNGMIIDLKFPLALYKKLLGSSL 832

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
            L+DLK++ P + +SLQ +LDY+E D+E+ F +TF 
Sbjct: 833 TLEDLKEMQPAVGRSLQCLLDYKEDDIEETFCLTFE 868



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 34/224 (15%)

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTH 140
           V  WG  THGQLGL   ++++ ++P+ ++   +V VV    G  H L +   G V++C +
Sbjct: 11  VLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGN 70

Query: 141 KENG-CGSDP---------SQGVQSNLVQDSHTTI--TSLNSPGELYTWGNNEYGQMGIN 188
            + G  G +          S G + N++Q S  T   T L   G+++TWG+NE  Q+G  
Sbjct: 71  NDYGQLGHEKPCKRPALIDSLG-ERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRG 129

Query: 189 NSNTTVTK-PQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK 247
             ++  T  P+ V  L +  +  +ACG+ H+  L+ +  ++Y +G  +  QL      +K
Sbjct: 130 QVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLT-ATGQIYTWGSNNHGQLG---LANK 185

Query: 248 TPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           TPQ                E   VS   GL + ++ +G DH++V
Sbjct: 186 TPQ---------------NEPQWVSCISGLPIVRVAAGADHNLV 214



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 421 VFLSPGCMNGSFLQVEND-EHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAI 479
           +F SP   N SFL    D E  +C+  + GVD+Q      + +  +  + +   +S   I
Sbjct: 446 LFSSPYSWNASFLASFRDPEPCACSRDHHGVDLQSANSVLNDLGSLPNKRIVQHISQ--I 503

Query: 480 LASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGALPAF 532
           + SH  L+  L   P D E LR++L +PL+  F +P  ++ L  P+A ++ A 
Sbjct: 504 MGSH--LLPCLPMAPADVECLRLYLIVPLFPPFKSPDSYKDLQCPYASSVAAL 554


>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
           domestica]
          Length = 1051

 Score =  181 bits (458), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 192/386 (49%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLG  +  + S +IP+ +K L            +  ++L 
Sbjct: 96  HSLALSDQGQLFSWGAGSDGQLG-HTTTEDSVAIPRLIKKL------------NQQMILQ 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH +AL   G+ FTWG + HGQLGL   +  SQ+ P+RVK L  + + Q  AG +
Sbjct: 143 VSCGNWHCMALAADGQFFTWGQNRHGQLGL-GKEFPSQASPQRVKSLEGIPLAQVAAGGA 201

Query: 126 HCLVLTSSGVVTCTHKENGCG------SDPSQGVQSNLVQ----------DSHTTITSLN 169
           H   L+ SG V    + N         +D        L++          + HT +  L 
Sbjct: 202 HSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAV--LT 259

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G   +GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 260 KSGGVFTFGAGSFGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 318

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    +++  DS   H    +VK I+SGGD 
Sbjct: 319 AFGCGARGQLGTGHTCNVKCPSPVKGHWAAHNGQLSSRADSFKYH----IVKHIFSGGDQ 374

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +K  +   +DDFR++N A     +N E +    +++ +  +  +++  L      
Sbjct: 375 TFVLCSKYENSSPADDFRIMNQAQYTSLINDETIAIWRQKLSEHSNSNSINGVL-----Q 429

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  + K
Sbjct: 430 ILSSAACWNGSFLEKKIDEHFKTSPK 455



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 163/344 (47%), Gaps = 92/344 (26%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL     +      + F+  ++  L++L+KL+ +N 
Sbjct: 547  NWWCQVCPRYFLKLVDLYKSAVVYLLTGRKTLLIP---VLFSSYITAALKLLEKLHKVNQ 603

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++ + DI+ DY  W   +     
Sbjct: 604  KV-----------------------KHVEYDKFYIPEISHLVDIQEDYLMWFLHQAGMKV 640

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPF+FDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 641  RPSIMQDAVTLCSYPFVFDAQAKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARS 700

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 701  PFLVLHVRRSNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 748

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMF 1104
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N                     
Sbjct: 749  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHN--------------------- 787

Query: 1105 KEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV---RFP 1145
                     WF            LIG +CGLAIYN+TV    FP
Sbjct: 788  ---------WFH-----------LIGIICGLAIYNFTVVDLHFP 811



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 130/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   ++    G SH     
Sbjct: 46  HSIFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 96

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLG  +  + S +IP+ +K L    ++Q   G  
Sbjct: 97  -------SLALSDQGQLFSWGAGSDGQLG-HTTTEDSVAIPRLIKKLNQQMILQVSCGNW 148

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HC+ L + G                                      + +TWG N +GQ+
Sbjct: 149 HCMALAADG--------------------------------------QFFTWGQNRHGQL 170

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV+SL  +P+A +A G  HSF LS S   ++ +G  +A QL  S ++
Sbjct: 171 GLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGRNNAGQLGLSDET 229

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 230 DRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 264



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/95 (50%), Positives = 70/95 (73%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG +CGLAIYN+T++++ FPLALYKK+L+   
Sbjct: 764 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVKP 823

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ +LDY   D+E+VF + F
Sbjct: 824 GLEDLKELSPTEGRSLQQLLDYPGEDVEEVFCLNF 858



 Score = 60.8 bits (146), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 430 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRMLFEKLMN----SQHSMLLEQILK 485

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 486 SFESFLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTLPLAMAI 534


>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Loxodonta africana]
          Length = 1057

 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 194/409 (47%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K LA + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLADIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ PK +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GLDCKKQASPKLLKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W+  P       D  + +     VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWL--PYNGQCPPD--IDYEDYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P+ QI  +N                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRYPDPSKQIWTIN-----------------EALVQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PPGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGA-RFSGVDMT 461



 Score =  169 bits (428), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 168/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPLLFFKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 798  ------------------------------IGVICGLAIYNFTI 811



 Score =  106 bits (264), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K LA + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLADIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         P+ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKKKPSLDDLKELVPDVGRSMQQLLDYPEDDIEETFCLNF 864



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 109/273 (39%), Gaps = 72/273 (26%)

Query: 19  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALND 78
           WG  + GQLGL   D++    P++     +  V                 GL H++ + D
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDV------------GCGLRHTVFVLD 51

Query: 79  CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC 138
            G V+T G +  GQLG E + KK    P++V  L + ++V    G +H L          
Sbjct: 52  DGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTL---------- 97

Query: 139 THKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQ 198
                                       +LN  G++Y WG +  GQ+G+  S   +  P+
Sbjct: 98  ----------------------------ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR 129

Query: 199 RVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIA 258
            ++SL ++ I  +ACG  HS  LSK+ S ++ +G     QL       K          A
Sbjct: 130 NIKSLADIQIVQVACGYYHSLALSKA-SEVFCWGQNKYGQLGLGLDCKKQ---------A 179

Query: 259 SPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           SP         L+    G+   ++ +GG HS V
Sbjct: 180 SP--------KLLKSLLGIPFMQVAAGGAHSFV 204



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + +     +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGARFSGVDMTAARLLFHRLIQPGHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Loxodonta africana]
          Length = 1049

 Score =  180 bits (456), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 194/409 (47%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K LA + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLADIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ PK +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GLDCKKQASPKLLKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W+  P       D  + +     VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWL--PYNGQCPPD--IDYEDYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P+ QI  +N                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRYPDPSKQIWTIN-----------------EALVQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PPGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGA-RFSGVDMT 461



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 168/336 (50%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPLLFFKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GMLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 789

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 790  ----------------------IGVICGLAIYNFTI 803



 Score =  106 bits (264), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K LA + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLADIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         P+ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKKKPSLDDLKELVPDVGRSMQQLLDYPEDDIEETFCLNF 856



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 109/273 (39%), Gaps = 72/273 (26%)

Query: 19  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALND 78
           WG  + GQLGL   D++    P++     +  V                 GL H++ + D
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDV------------GCGLRHTVFVLD 51

Query: 79  CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC 138
            G V+T G +  GQLG E + KK    P++V  L + ++V    G +H L          
Sbjct: 52  DGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTL---------- 97

Query: 139 THKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQ 198
                                       +LN  G++Y WG +  GQ+G+  S   +  P+
Sbjct: 98  ----------------------------ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR 129

Query: 199 RVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIA 258
            ++SL ++ I  +ACG  HS  LSK+ S ++ +G     QL       K          A
Sbjct: 130 NIKSLADIQIVQVACGYYHSLALSKA-SEVFCWGQNKYGQLGLGLDCKKQ---------A 179

Query: 259 SPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           SP         L+    G+   ++ +GG HS V
Sbjct: 180 SP--------KLLKSLLGIPFMQVAAGGAHSFV 204



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + +     +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGARFSGVDMTAARLLFHRLIQPGHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Equus caballus]
          Length = 1049

 Score =  180 bits (456), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 131/408 (32%), Positives = 194/408 (47%), Gaps = 66/408 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDYKKQASPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQDSHTT-----------ITS 167
           G +H  VLT SG +    + N  G    +D +     NL++   T              +
Sbjct: 198 GGAHSFVLTLSGAIFGWGR-NKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAA 256

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  R
Sbjct: 257 LTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGR 315

Query: 228 LYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           +Y+FG+G   QL +   S  K+P  + G W   P       D  +       VK+I+SGG
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF--PYNGQCPTD--IDSEEYFCVKRIFSGG 371

Query: 287 DHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY- 345
           D S    +   +    DDFR  +P+ QI  VN                 E L Q  L Y 
Sbjct: 372 DQSFAHYSNPQNCRPPDDFRCTDPSKQIWTVN-----------------EALIQKWLSYP 414

Query: 346 -----------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                      ++  F S GC+NGSFL V ND+H+   + KFS + ++
Sbjct: 415 SGRVPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYKTGA-KFSGVDMN 461



 Score =  173 bits (439), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 168/336 (50%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
                W+ ++    F +++ +FK+ +++LL++     ++     FN  L   L+VL+ L+ 
Sbjct: 543  VLEKWWSVLEPPLFLKIVELFKEVVVHLLKEYKRSIASPERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N ++                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKS----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GMLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 789

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 790  ----------------------IGVICGLAIYNFTI 803



 Score =  104 bits (260), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 126/278 (45%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ +   G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLHDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKKKPSLDDLKELVPDVGRSMQQLLDYPEDDVEETFCLNF 856



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   +K  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYKTGAKFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L  + PD EALR +LTLP      +P     + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTGSLPDVEALRFYLTLPECPLMNDPNNFITIAIPFGRAL 533


>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Equus caballus]
          Length = 1057

 Score =  179 bits (455), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 131/408 (32%), Positives = 194/408 (47%), Gaps = 66/408 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDYKKQASPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQDSHTT-----------ITS 167
           G +H  VLT SG +    + N  G    +D +     NL++   T              +
Sbjct: 198 GGAHSFVLTLSGAIFGWGR-NKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAA 256

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  R
Sbjct: 257 LTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGR 315

Query: 228 LYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           +Y+FG+G   QL +   S  K+P  + G W   P       D  +       VK+I+SGG
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF--PYNGQCPTD--IDSEEYFCVKRIFSGG 371

Query: 287 DHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY- 345
           D S    +   +    DDFR  +P+ QI  VN                 E L Q  L Y 
Sbjct: 372 DQSFAHYSNPQNCRPPDDFRCTDPSKQIWTVN-----------------EALIQKWLSYP 414

Query: 346 -----------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                      ++  F S GC+NGSFL V ND+H+   + KFS + ++
Sbjct: 415 SGRVPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYKTGA-KFSGVDMN 461



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 168/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
                W+ ++    F +++ +FK+ +++LL++     ++     FN  L   L+VL+ L+ 
Sbjct: 543  VLEKWWSVLEPPLFLKIVELFKEVVVHLLKEYKRSIASPERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N ++                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKS----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 798  ------------------------------IGVICGLAIYNFTI 811



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 126/278 (45%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ +   G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLHDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKKKPSLDDLKELVPDVGRSMQQLLDYPEDDVEETFCLNF 864



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   +K  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYKTGAKFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L  + PD EALR +LTLP      +P     + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTGSLPDVEALRFYLTLPECPLMNDPNNFITIAIPFGRAL 533


>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Canis lupus familiaris]
          Length = 1049

 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 132/408 (32%), Positives = 195/408 (47%), Gaps = 66/408 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQDSHTT-----------ITS 167
           G +H  VLT SG +    + N  G    +D +     NL++   T              +
Sbjct: 198 GGAHSFVLTLSGAIFGWGR-NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAA 256

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  R
Sbjct: 257 LTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGR 315

Query: 228 LYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           +Y+FG+G   QL +   S  K+P  + G W   P       D  +       VK+I+SGG
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF--PYNGQCPPD--IDSEEYFCVKRIFSGG 371

Query: 287 DHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY- 345
           D S    +   +    DDFR  +P+ QI  VN                 ETL Q  L Y 
Sbjct: 372 DQSFSHYSNPQNCGPPDDFRCPDPSKQIWTVN-----------------ETLIQKWLSYP 414

Query: 346 -----------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                      ++  F S GC+NGSFL V ND+H+   + KFS + ++
Sbjct: 415 SGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-KFSGVDMN 461



 Score =  176 bits (446), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 168/336 (50%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHK 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GMLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 789

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 790  ----------------------IGVICGLAIYNFTI 803



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKKKPSLDDLKELVPDVGRSMQQLLDYPEDDVEETFCLNF 856



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 99/236 (41%), Gaps = 57/236 (24%)

Query: 19  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALND 78
           WG  + GQLGL   D++    P++     +  V                 GL H++ + D
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDV------------GCGLRHTVFVLD 51

Query: 79  CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC 138
            G V+T G +  GQLG E + KK    P++V  L + ++V    G +H L          
Sbjct: 52  DGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTL---------- 97

Query: 139 THKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQ 198
                                       +LN  G++Y WG +  GQ+G+  S   +  P+
Sbjct: 98  ----------------------------ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR 129

Query: 199 RVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK--TPQLI 252
            ++SL ++ I  +ACG  HS  LSK+ S ++ +G     QL       K  +PQLI
Sbjct: 130 NIKSLSDIQIVQVACGYYHSLALSKA-SEVFCWGQNKYGQLGLGIDCKKQASPQLI 184



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   +K  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTKFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Ailuropoda melanoleuca]
          Length = 1049

 Score =  179 bits (454), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 129/398 (32%), Positives = 197/398 (49%), Gaps = 46/398 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQDSHTT-----------ITS 167
           G +H  VLT SG +    + N  G    +D +     NL++   T              +
Sbjct: 198 GGAHSFVLTLSGAIFGWGR-NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAA 256

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  R
Sbjct: 257 LTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGR 315

Query: 228 LYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           +Y+FG+G   QL +   S  K+P  + G W   P       D  +       VK+I+SGG
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF--PYTGQCPPD--IDSEEYFCVKRIFSGG 371

Query: 287 DHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKS--DETLDQDLLL 344
           D S    +   +    DDFR  +P+ QI  VN       E  +++  S     L  ++  
Sbjct: 372 DQSFSHYSNRQNCGPPDDFRCPDPSKQIWTVN-------EALIQKWLSYPSGRLPVEIAN 424

Query: 345 YLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
            ++  F S GC+NGSFL V ND+H+   + KFS + ++
Sbjct: 425 EIDGTFSSSGCLNGSFLAVSNDDHYRTGT-KFSGVDMN 461



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 168/336 (50%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVLHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GMLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 789

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 790  ----------------------IGVICGLAIYNFTI 803



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKKKPSLDDLKELVPDVGRSMQQLLDYPEDDVEETFCLNF 856



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 99/236 (41%), Gaps = 57/236 (24%)

Query: 19  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALND 78
           WG  + GQLGL   D++    P++     +  V                 GL H++ + D
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDV------------GCGLRHTVFVLD 51

Query: 79  CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC 138
            G V+T G +  GQLG E + KK    P++V  L + ++V    G +H L          
Sbjct: 52  DGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTL---------- 97

Query: 139 THKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQ 198
                                       +LN  G++Y WG +  GQ+G+  S   +  P+
Sbjct: 98  ----------------------------ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR 129

Query: 199 RVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK--TPQLI 252
            ++SL ++ I  +ACG  HS  LSK+ S ++ +G     QL       K  +PQLI
Sbjct: 130 NIKSLSDIQIVQVACGYYHSLALSKA-SEVFCWGQNKYGQLGLGIDCKKQASPQLI 184



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   +K  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTKFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Ailuropoda melanoleuca]
 gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
          Length = 1057

 Score =  179 bits (454), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 129/398 (32%), Positives = 197/398 (49%), Gaps = 46/398 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQDSHTT-----------ITS 167
           G +H  VLT SG +    + N  G    +D +     NL++   T              +
Sbjct: 198 GGAHSFVLTLSGAIFGWGR-NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAA 256

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  R
Sbjct: 257 LTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGR 315

Query: 228 LYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           +Y+FG+G   QL +   S  K+P  + G W   P       D  +       VK+I+SGG
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF--PYTGQCPPD--IDSEEYFCVKRIFSGG 371

Query: 287 DHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKS--DETLDQDLLL 344
           D S    +   +    DDFR  +P+ QI  VN       E  +++  S     L  ++  
Sbjct: 372 DQSFSHYSNRQNCGPPDDFRCPDPSKQIWTVN-------EALIQKWLSYPSGRLPVEIAN 424

Query: 345 YLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
            ++  F S GC+NGSFL V ND+H+   + KFS + ++
Sbjct: 425 EIDGTFSSSGCLNGSFLAVSNDDHYRTGT-KFSGVDMN 461



 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 168/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVLHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 798  ------------------------------IGVICGLAIYNFTI 811



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKKKPSLDDLKELVPDVGRSMQQLLDYPEDDVEETFCLNF 864



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 99/236 (41%), Gaps = 57/236 (24%)

Query: 19  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALND 78
           WG  + GQLGL   D++    P++     +  V                 GL H++ + D
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDV------------GCGLRHTVFVLD 51

Query: 79  CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC 138
            G V+T G +  GQLG E + KK    P++V  L + ++V    G +H L          
Sbjct: 52  DGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTL---------- 97

Query: 139 THKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQ 198
                                       +LN  G++Y WG +  GQ+G+  S   +  P+
Sbjct: 98  ----------------------------ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR 129

Query: 199 RVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK--TPQLI 252
            ++SL ++ I  +ACG  HS  LSK+ S ++ +G     QL       K  +PQLI
Sbjct: 130 NIKSLSDIQIVQVACGYYHSLALSKA-SEVFCWGQNKYGQLGLGIDCKKQASPQLI 184



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   +K  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTKFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform 1
            [Anolis carolinensis]
          Length = 1052

 Score =  179 bits (454), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 103/283 (36%), Positives = 156/283 (55%), Gaps = 39/283 (13%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ L+    F +++ ++K  +++LL+   +    +    F   L   L+VL+ L+ 
Sbjct: 546  VLENWWSLLEPPLFLKIVELYKDVVVHLLKLYKMGIPASEQRIFTSCLHTSLKVLEILHR 605

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N  +                      G+ + Y  FY+ ++  + DIR DYF WI  +  
Sbjct: 606  VNERS----------------------GQIIQYDKFYVHEIQDLIDIRNDYFNWIQQQAY 643

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +   F   F P   ++N  
Sbjct: 644  GMLGDLPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAVDQAHRQNFSSIFLPVYESVNPC 703

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V RDNIV D +  L +    D+KKPLKV             F GEEA DAGGVR+E
Sbjct: 704  LILIVRRDNIVGDAMEVLRKTKNVDYKKPLKV------------IFVGEEAVDAGGVRKE 751

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ LIG
Sbjct: 752  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHLIG 794



 Score =  176 bits (445), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 127/403 (31%), Positives = 196/403 (48%), Gaps = 53/403 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+L LND G+V+ WG    GQLGL   ++ ++ +P+ +K L+ V +VQ   GY    
Sbjct: 92  GEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTR-VPRNIKSLSDVQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF+WG + HGQLGL   D K Q+ P+ +K L  +   Q  A
Sbjct: 147 --------YHSLALSKGSEVFSWGQNKHGQLGL-GYDLKKQTSPQLIKSLLGIPFGQIAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQ-------------DSHTTI 165
           G +H   LT SG V    + N  G    +D +     NL++             + HT  
Sbjct: 198 GGAHSFALTLSGAVFGWGR-NKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTA- 255

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L   G ++T+G   YGQ+G N++   +  P++V  L+   +  IACG  H+     S 
Sbjct: 256 -ALTKEGGVFTFGAGGYGQLGHNSTGHEIN-PRKVFELMGNIVTQIACGRQHTSAFVPST 313

Query: 226 SRLYAFGIGSAVQLD-SPKSVHKTPQLIHGPWIA--SPVAMTAGEDSLVSHSGGLVVKKI 282
            R+Y+FG+G   QL     S  K+P  + G ++     + + +  D          V++I
Sbjct: 314 GRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNFLPFNGQIPLNSDRDEY------YYVRRI 367

Query: 283 YSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVN---FERLKECEREVEQLKSDETLD 339
           +SGGD S        D + +DDFR  N + QI  VN    +RL  C          E  +
Sbjct: 368 FSGGDQSFSHYVTLQDLIPADDFRHSNGSKQIWTVNEAFIQRLLNCSSSGAGRLPVEIAN 427

Query: 340 QDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
           +     ++  F S GC+NGSFL + ND+H+   S +FS + ++
Sbjct: 428 E-----IDGTFSSAGCLNGSFLAISNDDHYRT-SARFSGVDMN 464



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 74/101 (73%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+ + FPLALYKK
Sbjct: 763 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVVCGLAIYNFTIVELHFPLALYKK 818

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L++   L+DLK+L P + +S+Q +LDY E D+ED F + F
Sbjct: 819 LLNKKPSLEDLKELMPDVGRSMQQLLDYPEDDIEDTFCLNF 859



 Score =  105 bits (262), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 127/278 (45%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E    KS+  P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHE----KSRKRPEQVGALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +L LND G+V+ WG    GQLGL   ++ ++ +P+ +K L+ V +VQ   
Sbjct: 96  ----------TLTLNDKGQVYAWGFAADGQLGLPGTEEYTR-VPRNIKSLSDVQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+                                         E+++WG N++
Sbjct: 145 GYYHSLALSKGS--------------------------------------EVFSWGQNKH 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   IA G  HSF L+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLS-GAVFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V ++ GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGV 263



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL + ND+H+  +++  GVDM   +  +  + + E   +   V+  
Sbjct: 429 IDGTFSSAGCLNGSFLAISNDDHYRTSARFSGVDMNAARLLFHKLIQPEHPHISQQVA-- 486

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR+FLTLP      +   +  L +PFA A+
Sbjct: 487 --ASLEKNLIPKLTSSLPDVEALRLFLTLPECPLMNDSNNYMTLAIPFATAI 536


>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           3 [Ailuropoda melanoleuca]
          Length = 1054

 Score =  179 bits (454), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 129/398 (32%), Positives = 197/398 (49%), Gaps = 46/398 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQDSHTT-----------ITS 167
           G +H  VLT SG +    + N  G    +D +     NL++   T              +
Sbjct: 198 GGAHSFVLTLSGAIFGWGR-NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAA 256

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  R
Sbjct: 257 LTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGR 315

Query: 228 LYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           +Y+FG+G   QL +   S  K+P  + G W   P       D  +       VK+I+SGG
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF--PYTGQCPPD--IDSEEYFCVKRIFSGG 371

Query: 287 DHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKS--DETLDQDLLL 344
           D S    +   +    DDFR  +P+ QI  VN       E  +++  S     L  ++  
Sbjct: 372 DQSFSHYSNRQNCGPPDDFRCPDPSKQIWTVN-------EALIQKWLSYPSGRLPVEIAN 424

Query: 345 YLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
            ++  F S GC+NGSFL V ND+H+   + KFS + ++
Sbjct: 425 EIDGTFSSSGCLNGSFLAVSNDDHYRTGT-KFSGVDMN 461



 Score =  171 bits (434), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 168/341 (49%), Gaps = 85/341 (24%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVLHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF--------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--H 981
            G   +         +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   
Sbjct: 641  GMKSETSLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIE 700

Query: 982  TLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAG 1041
            ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAG
Sbjct: 701  SVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAG 748

Query: 1042 GVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKY 1101
            GVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L              
Sbjct: 749  GVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL-------------- 794

Query: 1102 SMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                       IG +CGLAIYN+T+
Sbjct: 795  ---------------------------IGVICGLAIYNFTI 808



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 765 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 820

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 821 LLKKKPSLDDLKELVPDVGRSMQQLLDYPEDDVEETFCLNF 861



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 99/236 (41%), Gaps = 57/236 (24%)

Query: 19  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALND 78
           WG  + GQLGL   D++    P++     +  V                 GL H++ + D
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDV------------GCGLRHTVFVLD 51

Query: 79  CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC 138
            G V+T G +  GQLG E + KK    P++V  L + ++V    G +H L          
Sbjct: 52  DGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTL---------- 97

Query: 139 THKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQ 198
                                       +LN  G++Y WG +  GQ+G+  S   +  P+
Sbjct: 98  ----------------------------ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR 129

Query: 199 RVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK--TPQLI 252
            ++SL ++ I  +ACG  HS  LSK+ S ++ +G     QL       K  +PQLI
Sbjct: 130 NIKSLSDIQIVQVACGYYHSLALSKA-SEVFCWGQNKYGQLGLGIDCKKQASPQLI 184



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   +K  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTKFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Canis lupus familiaris]
          Length = 1057

 Score =  179 bits (454), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 132/408 (32%), Positives = 195/408 (47%), Gaps = 66/408 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQDSHTT-----------ITS 167
           G +H  VLT SG +    + N  G    +D +     NL++   T              +
Sbjct: 198 GGAHSFVLTLSGAIFGWGR-NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAA 256

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  R
Sbjct: 257 LTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGR 315

Query: 228 LYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           +Y+FG+G   QL +   S  K+P  + G W   P       D  +       VK+I+SGG
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF--PYNGQCPPD--IDSEEYFCVKRIFSGG 371

Query: 287 DHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY- 345
           D S    +   +    DDFR  +P+ QI  VN                 ETL Q  L Y 
Sbjct: 372 DQSFSHYSNPQNCGPPDDFRCPDPSKQIWTVN-----------------ETLIQKWLSYP 414

Query: 346 -----------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                      ++  F S GC+NGSFL V ND+H+   + KFS + ++
Sbjct: 415 SGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-KFSGVDMN 461



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 168/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHK 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 798  ------------------------------IGVICGLAIYNFTI 811



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKKKPSLDDLKELVPDVGRSMQQLLDYPEDDVEETFCLNF 864



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 99/236 (41%), Gaps = 57/236 (24%)

Query: 19  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALND 78
           WG  + GQLGL   D++    P++     +  V                 GL H++ + D
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDV------------GCGLRHTVFVLD 51

Query: 79  CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC 138
            G V+T G +  GQLG E + KK    P++V  L + ++V    G +H L          
Sbjct: 52  DGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTL---------- 97

Query: 139 THKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQ 198
                                       +LN  G++Y WG +  GQ+G+  S   +  P+
Sbjct: 98  ----------------------------ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPR 129

Query: 199 RVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK--TPQLI 252
            ++SL ++ I  +ACG  HS  LSK+ S ++ +G     QL       K  +PQLI
Sbjct: 130 NIKSLSDIQIVQVACGYYHSLALSKA-SEVFCWGQNKYGQLGLGIDCKKQASPQLI 184



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   +K  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTKFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
           adamanteus]
          Length = 1052

 Score =  179 bits (453), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/402 (32%), Positives = 200/402 (49%), Gaps = 51/402 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG    GQLGL   ++ ++ +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTR-VPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF+WG + +GQLGL   + K Q+ P+ +K L  +   Q  A
Sbjct: 147 --------FHSLALSKGSEVFSWGQNKYGQLGL-GYEYKKQASPQIIKSLLGIPFAQIAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQ-------------DSHTTI 165
           G +H  VLT SG V    + N  G    +D +     NL++             + HT  
Sbjct: 198 GGAHSFVLTLSGAVFGWGR-NKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTA- 255

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L   G ++T+G   YGQ+G +NS      P++V  L+   +  IACG  H+     S 
Sbjct: 256 -ALTKEGGVFTFGAGGYGQLG-HNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPST 313

Query: 226 SRLYAFGIGSAVQLD-SPKSVHKTPQLIHGPWIASPVAM---TAGEDSLVSHSGGLVVKK 281
            R+Y+FG+G   QL     S  K+P  + G W+     +   + GED          VK+
Sbjct: 314 GRIYSFGLGGNGQLGMGTTSNRKSPFPVKGNWLPYNGQIPLNSDGEDY-------YCVKR 366

Query: 282 IYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDE-TLDQ 340
           I+SGGD S        D + +DDFR  N + QI  VN   +   +R +    S    L  
Sbjct: 367 IFSGGDQSFSHYVTPQDLIPADDFRYPNASKQIWTVNEAFI---QRLINYSSSGAGRLPV 423

Query: 341 DLLLYLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
           ++   ++ +F S GC+NGSFL V ND+H+   S +FS + ++
Sbjct: 424 EIANEIDGMFSSAGCLNGSFLAVSNDDHYK-TSARFSGVDMN 464



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/283 (36%), Positives = 154/283 (54%), Gaps = 39/283 (13%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F R++ ++K  +++LL+   +    +    F   L   L+VL+ L+ 
Sbjct: 546  VLENWWSILEPPLFLRIVELYKDVVVHLLKLYKLGIPASEQRIFASCLHASLKVLEILHR 605

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N                        GG+ + Y  FY+ ++  + DIR DYF WI  +  
Sbjct: 606  VNER----------------------GGQIIQYDKFYIHEIQDLIDIRNDYFSWIQQQAY 643

Query: 932  GSTRD---FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +   F   F P   ++N  
Sbjct: 644  GMVSDGPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAVDQAHRQNFSSIFLPVFESVNPC 703

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GEEA DAGGVR+E
Sbjct: 704  LILIVRRENIVGDAMEVLRKTQNLDYKKPLKV------------IFVGEEAVDAGGVRKE 751

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            F +L+++E+LDPKYGMF+  E +R IWFS+ TFED +++ LIG
Sbjct: 752  FFLLIMRELLDPKYGMFRYDENSRLIWFSDKTFEDSDLFHLIG 794



 Score =  110 bits (276), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 51/95 (53%), Positives = 72/95 (75%), Gaps = 1/95 (1%)

Query: 720 YGITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y+E +R IWFS+ TFED ++  LIG +CGLAIYN+TI+ + FPLALYKK+L++  
Sbjct: 765 YGMFRYDENSRLIWFSDKTFEDSDLFHLIGVVCGLAIYNFTIVELHFPLALYKKLLNKKP 824

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+L P + +S+Q +LDY E D+ED F + F
Sbjct: 825 SLEDLKELMPDVGRSMQQLLDYPEDDVEDTFCLNF 859



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 130/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E    KS+  P++V  L + ++V          
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHE----KSRKRPEQVGALDAQNIV---------- 87

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             T + G  H+LALND G+V+ WG    GQLGL   ++ ++ +P+ +K L+ + +VQ   
Sbjct: 88  --TVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTR-VPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+                                         E+++WG N+Y
Sbjct: 145 GYFHSLALSKGS--------------------------------------EVFSWGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         PQ ++SL+ +P A IA G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLS-GAVFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V ++ GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGV 263



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++ +F S GC+NGSFL V ND+H+  +++  GVDM   +  +  + + E   +   V+  
Sbjct: 429 IDGMFSSAGCLNGSFLAVSNDDHYKTSARFSGVDMNAARLLFHKLVQPEHPHISQQVA-- 486

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR+FLTLP          +  L +PFA A+
Sbjct: 487 --ASLEKNLIPKLTSSLPDVEALRLFLTLPECPLMNESNNYMTLAIPFATAI 536


>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Canis lupus familiaris]
          Length = 1054

 Score =  179 bits (453), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/408 (32%), Positives = 195/408 (47%), Gaps = 66/408 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+  GE F WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKEGEFFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQDSHTT-----------ITS 167
           G +H  VLT SG +    + N  G    +D +     NL++   T              +
Sbjct: 198 GGAHSFVLTLSGAIFGWGR-NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAA 256

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  R
Sbjct: 257 LTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGR 315

Query: 228 LYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           +Y+FG+G   QL +   S  K+P  + G W   P       D  +       VK+I+SGG
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF--PYNGQCPPD--IDSEEYFCVKRIFSGG 371

Query: 287 DHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY- 345
           D S    +   +    DDFR  +P+ QI  VN                 ETL Q  L Y 
Sbjct: 372 DQSFSHYSNPQNCGPPDDFRCPDPSKQIWTVN-----------------ETLIQKWLSYP 414

Query: 346 -----------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                      ++  F S GC+NGSFL V ND+H+   + KFS + ++
Sbjct: 415 SGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-KFSGVDMN 461



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 169/341 (49%), Gaps = 85/341 (24%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHK 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  G-----STRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--H 981
            G     S  D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   
Sbjct: 641  GMKSKTSLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIE 700

Query: 982  TLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAG 1041
            ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAG
Sbjct: 701  SVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAG 748

Query: 1042 GVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKY 1101
            GVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L              
Sbjct: 749  GVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL-------------- 794

Query: 1102 SMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                       IG +CGLAIYN+T+
Sbjct: 795  ---------------------------IGVICGLAIYNFTI 808



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+  G                                      E + WG N+Y
Sbjct: 145 GYYHSLALSKEG--------------------------------------EFFCWGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 765 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 820

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 821 LLKKKPSLDDLKELVPDVGRSMQQLLDYPEDDVEETFCLNF 861



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   +K  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTKFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
           garnettii]
          Length = 1049

 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 193/409 (47%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GLDCKKQTSPQLIKSLVGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W   P +     D  +       VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF--PYSGQCLPD--IDSEEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P+ QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRYPDPSRQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + KFS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-KFSGVDMN 461



 Score =  176 bits (446), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 168/336 (50%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNNFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GMLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 789

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 790  ----------------------IGVICGLAIYNFTI 803



 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SLV +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 856



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   +K  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTKFSGVDMNTARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Sarcophilus harrisii]
          Length = 1057

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/405 (32%), Positives = 191/405 (47%), Gaps = 75/405 (18%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG DT GQLGL   ++  + +P+ +K L  + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIR-VPRNIKSLTDIQIVQIACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF+WG + HGQLGL   + K QS P+ +K L  +   Q  A
Sbjct: 147 --------YHSLALSKGSEVFSWGQNKHGQLGL-GFELKRQSSPQLIKSLLGIPFTQVAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQ-------------DSHTTI 165
           G +H  VLT SG +    + N  G    +D +     NL++             + HT  
Sbjct: 198 GGAHSFVLTLSGAIFGWGR-NKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHT-- 254

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S 
Sbjct: 255 AALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSS 313

Query: 226 SRLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWI---ASPVAMTAGEDSLVSHSGGLVVKK 281
            R+Y+FG+G   QL +   S  K+P  + G W       +  + GE+          VK+
Sbjct: 314 GRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYSGKCLPESDGEEF-------FCVKR 366

Query: 282 IYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           I+SGGD S    +        DDFR  +P+ QI  VN                 ETL Q 
Sbjct: 367 IFSGGDQSFSHYSCPQGLGPPDDFRCPDPSKQIWTVN-----------------ETLIQR 409

Query: 342 LLLY------------LETVFLSPGCMNGSFLQVENDEHFSCNSK 374
            L Y            ++  F S  C+NGSFL V ND+H+   SK
Sbjct: 410 WLSYSSGRFPLEIANEIDGTFSSAACLNGSFLAVSNDDHYRTGSK 454



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 168/343 (48%), Gaps = 88/343 (25%)

Query: 813  FRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSL 872
              NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ +
Sbjct: 544  LENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRVFNSFLHTALKVLEILHRV 603

Query: 873  NNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNG 932
            N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  G
Sbjct: 604  NEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAYG 641

Query: 933  STRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP- 980
               +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P 
Sbjct: 642  MDINHGLTELTEIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPV 701

Query: 981  -HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAED 1039
              ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A D
Sbjct: 702  IESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVD 749

Query: 1040 AGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYIS 1099
            AGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L            
Sbjct: 750  AGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------ 797

Query: 1100 KYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                         IG +CGLAIYN+T+
Sbjct: 798  -----------------------------IGVICGLAIYNFTI 811



 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG DT GQLGL   ++  + +P+ +K L  + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDTDGQLGLPGTEEYIR-VPRNIKSLTDIQIVQIAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+                                         E+++WG N++
Sbjct: 145 GYYHSLALSKGS--------------------------------------EVFSWGQNKH 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       + PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 94.4 bits (233), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+ED F + F
Sbjct: 824 LLKKKASLDDLKELMPDVGRSMQQLLDYPEDDIEDTFCLNF 864



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 113/275 (41%), Gaps = 76/275 (27%)

Query: 19  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALND 78
           WG  + GQLGL   D++    P++     +  V     G            L H++ + D
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCG------------LRHTVFVLD 51

Query: 79  CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC 138
            G V+T G +  GQLG E + KK    P++V  L + ++V    G +H L          
Sbjct: 52  DGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTL---------- 97

Query: 139 THKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQ 198
                                       +LN  G++Y WG +  GQ+G+  +   +  P+
Sbjct: 98  ----------------------------ALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPR 129

Query: 199 RVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK--TPQLIHGPW 256
            ++SL ++ I  IACG  HS  LSK  S ++++G     QL     + +  +PQLI    
Sbjct: 130 NIKSLTDIQIVQIACGYYHSLALSKG-SEVFSWGQNKHGQLGLGFELKRQSSPQLIK--- 185

Query: 257 IASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
                       SL+    G+   ++ +GG HS V
Sbjct: 186 ------------SLL----GIPFTQVAAGGAHSFV 204



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S  C+NGSFL V ND+H+   SK  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSAACLNGSFLAVSNDDHYRTGSKYSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +L LP      +      + +PF  AL
Sbjct: 484 --ASLEKNLLPKLTSSLPDVEALRFYLILPECPLMSDSNNFTTIAIPFGTAL 533


>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Sarcophilus harrisii]
          Length = 1049

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/405 (32%), Positives = 191/405 (47%), Gaps = 75/405 (18%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG DT GQLGL   ++  + +P+ +K L  + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIR-VPRNIKSLTDIQIVQIACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF+WG + HGQLGL   + K QS P+ +K L  +   Q  A
Sbjct: 147 --------YHSLALSKGSEVFSWGQNKHGQLGL-GFELKRQSSPQLIKSLLGIPFTQVAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQ-------------DSHTTI 165
           G +H  VLT SG +    + N  G    +D +     NL++             + HT  
Sbjct: 198 GGAHSFVLTLSGAIFGWGR-NKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHT-- 254

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S 
Sbjct: 255 AALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSS 313

Query: 226 SRLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWI---ASPVAMTAGEDSLVSHSGGLVVKK 281
            R+Y+FG+G   QL +   S  K+P  + G W       +  + GE+          VK+
Sbjct: 314 GRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYSGKCLPESDGEEF-------FCVKR 366

Query: 282 IYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           I+SGGD S    +        DDFR  +P+ QI  VN                 ETL Q 
Sbjct: 367 IFSGGDQSFSHYSCPQGLGPPDDFRCPDPSKQIWTVN-----------------ETLIQR 409

Query: 342 LLLY------------LETVFLSPGCMNGSFLQVENDEHFSCNSK 374
            L Y            ++  F S  C+NGSFL V ND+H+   SK
Sbjct: 410 WLSYSSGRFPLEIANEIDGTFSSAACLNGSFLAVSNDDHYRTGSK 454



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 168/336 (50%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRVFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   +    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GMLTEIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 789

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 790  ----------------------IGVICGLAIYNFTI 803



 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG DT GQLGL   ++  + +P+ +K L  + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDTDGQLGLPGTEEYIR-VPRNIKSLTDIQIVQIAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+                                         E+++WG N++
Sbjct: 145 GYYHSLALSKGS--------------------------------------EVFSWGQNKH 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       + PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 94.4 bits (233), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+ED F + F
Sbjct: 816 LLKKKASLDDLKELMPDVGRSMQQLLDYPEDDIEDTFCLNF 856



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 113/275 (41%), Gaps = 76/275 (27%)

Query: 19  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALND 78
           WG  + GQLGL   D++    P++     +  V     G            L H++ + D
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCG------------LRHTVFVLD 51

Query: 79  CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC 138
            G V+T G +  GQLG E + KK    P++V  L + ++V    G +H L          
Sbjct: 52  DGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTL---------- 97

Query: 139 THKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQ 198
                                       +LN  G++Y WG +  GQ+G+  +   +  P+
Sbjct: 98  ----------------------------ALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPR 129

Query: 199 RVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK--TPQLIHGPW 256
            ++SL ++ I  IACG  HS  LSK  S ++++G     QL     + +  +PQLI    
Sbjct: 130 NIKSLTDIQIVQIACGYYHSLALSKG-SEVFSWGQNKHGQLGLGFELKRQSSPQLIK--- 185

Query: 257 IASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
                       SL+    G+   ++ +GG HS V
Sbjct: 186 ------------SLL----GIPFTQVAAGGAHSFV 204



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S  C+NGSFL V ND+H+   SK  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSAACLNGSFLAVSNDDHYRTGSKYSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +L LP      +      + +PF  AL
Sbjct: 484 --ASLEKNLLPKLTSSLPDVEALRFYLILPECPLMSDSNNFTTIAIPFGTAL 533


>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Sarcophilus harrisii]
          Length = 979

 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/405 (32%), Positives = 191/405 (47%), Gaps = 75/405 (18%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG DT GQLGL   ++  + +P+ +K L  + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIR-VPRNIKSLTDIQIVQIACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF+WG + HGQLGL   + K QS P+ +K L  +   Q  A
Sbjct: 147 --------YHSLALSKGSEVFSWGQNKHGQLGL-GFELKRQSSPQLIKSLLGIPFTQVAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQ-------------DSHTTI 165
           G +H  VLT SG +    + N  G    +D +     NL++             + HT  
Sbjct: 198 GGAHSFVLTLSGAIFGWGR-NKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHT-- 254

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S 
Sbjct: 255 AALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSS 313

Query: 226 SRLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWI---ASPVAMTAGEDSLVSHSGGLVVKK 281
            R+Y+FG+G   QL +   S  K+P  + G W       +  + GE+          VK+
Sbjct: 314 GRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYSGKCLPESDGEEF-------FCVKR 366

Query: 282 IYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           I+SGGD S    +        DDFR  +P+ QI  VN                 ETL Q 
Sbjct: 367 IFSGGDQSFSHYSCPQGLGPPDDFRCPDPSKQIWTVN-----------------ETLIQR 409

Query: 342 LLLY------------LETVFLSPGCMNGSFLQVENDEHFSCNSK 374
            L Y            ++  F S  C+NGSFL V ND+H+   SK
Sbjct: 410 WLSYSSGRFPLEIANEIDGTFSSAACLNGSFLAVSNDDHYRTGSK 454



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 147/277 (53%), Gaps = 47/277 (16%)

Query: 813  FRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSL 872
              NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ +
Sbjct: 544  LENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRVFNSFLHTALKVLEILHRV 603

Query: 873  NNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNG 932
            N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  G
Sbjct: 604  NEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAYG 641

Query: 933  STRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP- 980
               +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P 
Sbjct: 642  MDINHGLTELTEIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPV 701

Query: 981  -HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAED 1039
              ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A D
Sbjct: 702  IESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVD 749

Query: 1040 AGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSE 1076
            AGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+
Sbjct: 750  AGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSD 786



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG DT GQLGL   ++  + +P+ +K L  + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDTDGQLGLPGTEEYIR-VPRNIKSLTDIQIVQIAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+                                         E+++WG N++
Sbjct: 145 GYYHSLALSKGS--------------------------------------EVFSWGQNKH 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       + PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 113/275 (41%), Gaps = 76/275 (27%)

Query: 19  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALND 78
           WG  + GQLGL   D++    P++     +  V     G            L H++ + D
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCG------------LRHTVFVLD 51

Query: 79  CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC 138
            G V+T G +  GQLG E + KK    P++V  L + ++V    G +H L          
Sbjct: 52  DGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTL---------- 97

Query: 139 THKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQ 198
                                       +LN  G++Y WG +  GQ+G+  +   +  P+
Sbjct: 98  ----------------------------ALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPR 129

Query: 199 RVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK--TPQLIHGPW 256
            ++SL ++ I  IACG  HS  LSK  S ++++G     QL     + +  +PQLI    
Sbjct: 130 NIKSLTDIQIVQIACGYYHSLALSKG-SEVFSWGQNKHGQLGLGFELKRQSSPQLI---- 184

Query: 257 IASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
                       SL+    G+   ++ +GG HS V
Sbjct: 185 -----------KSLL----GIPFTQVAAGGAHSFV 204



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S  C+NGSFL V ND+H+   SK  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSAACLNGSFLAVSNDDHYRTGSKYSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +L LP      +      + +PF  AL
Sbjct: 484 --ASLEKNLLPKLTSSLPDVEALRFYLILPECPLMSDSNNFTTIAIPFGTAL 533


>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
           [Sarcophilus harrisii]
          Length = 638

 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 192/386 (49%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLG  +  + S +IP+ +K L            +  ++L 
Sbjct: 96  HSLALSDQGQLFSWGAGSDGQLG-HTTTEDSVAIPRLIKKL------------NQQMILQ 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH +AL   G+ FTWG + HGQLGL   +  SQ+ P+RVK L  + + Q  AG +
Sbjct: 143 VSCGNWHCMALAADGQFFTWGQNRHGQLGL-GKEFPSQASPQRVKSLEGIPLAQVAAGGA 201

Query: 126 HCLVLTSSGVVTCTHKENGCG------SDPSQGVQSNLVQ----------DSHTTITSLN 169
           H   L+ SG V    + N         +D        L++          + HT +  L 
Sbjct: 202 HSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAV--LT 259

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G   +GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 260 KSGGVFTFGAGSFGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 318

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    +++  DS   H    +VK I+SGGD 
Sbjct: 319 AFGCGARGQLGTGHTCNVKCPSPVKGHWAAHNGQLSSRADSFKYH----IVKHIFSGGDQ 374

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +K  +   +DDFR++N A     +N E +    +++ +  +  +++  L      
Sbjct: 375 TFVLCSKYENSSPADDFRIMNQAQYTSLINDETIAIWRQKLSEHSNSNSINGVL-----Q 429

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  + K
Sbjct: 430 ILSSAACWNGSFLEKKIDEHFKTSPK 455



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   +V    G SH     
Sbjct: 46  HSIFLLEDGEVYTCGSNTKGQLGHEREGNK----PEQIGALADQHIVHVACGESH----- 96

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLG  +  + S +IP+ +K L    ++Q   G  
Sbjct: 97  -------SLALSDQGQLFSWGAGSDGQLG-HTTTEDSVAIPRLIKKLNQQMILQVSCGNW 148

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HC+ L + G                                      + +TWG N +GQ+
Sbjct: 149 HCMALAADG--------------------------------------QFFTWGQNRHGQL 170

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV+SL  +P+A +A G  HSF LS S   ++ +G  +A QL  S ++
Sbjct: 171 GLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGRNNAGQLGLSDET 229

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 230 DRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 264



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 430 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSMLLEQILK 485

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 486 SFESFLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTLPLAMAI 534



 Score = 43.1 bits (100), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 26/111 (23%)

Query: 815 NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
           NW+  +   YF +L+ ++K  ++YLL     +      + F+  ++  L++L+KL+ +N 
Sbjct: 547 NWWCQVCPRYFLKLVDLYKSAVVYLLSGRKTLLIP---VLFSSYITAALKLLEKLHKVNQ 603

Query: 875 ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRW 925
           +                        + V Y  FY+P+++ + DI+ DY  W
Sbjct: 604 KV-----------------------KHVEYDKFYIPEISHLVDIQEDYLMW 631


>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Cricetulus griseus]
          Length = 1057

 Score =  177 bits (449), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 193/409 (47%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V++WG D+ GQLGL  +++  + +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIR-VPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCKKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  +ACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W +         DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIDS----EDCFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +       +DDFR  +P+ QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSNPQSCGPADDFRCPDPSKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL   ND+H+   + KFS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLATSNDDHYRTGT-KFSGVDMN 461



 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 168/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQLIQYDKFYIHEVQDLIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G                +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GVDVSHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +  + D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKSIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFQYYEDSRLIWFSDKTFEDSDLFHL----------- 797

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 798  ------------------------------IGVICGLAIYNFTI 811



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFQY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L     L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKRKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 864



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 130/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V++WG D+ GQLGL  +++  + +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYSWGLDSDGQLGLLGSEEYIR-VPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL   ND+H+   +K  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLATSNDDHYRTGTKFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
          Length = 1049

 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 130/408 (31%), Positives = 194/408 (47%), Gaps = 66/408 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF+WG + +GQLGL   D   Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFSWGQNKYGQLGL-GIDCNKQASPQLIKSLTGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQDSHTT-----------ITS 167
           G +H  VLT SG +    + N  G    +D +     NL++   T              +
Sbjct: 198 GGAHSFVLTLSGAIFGWGR-NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAA 256

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  R
Sbjct: 257 LTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGR 315

Query: 228 LYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           +Y+FG+G   QL +   S  K+P  + G W   P       D  V       VK+I+SGG
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF--PYNGQCPPD--VGSEEYFCVKRIFSGG 371

Query: 287 DHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY- 345
           D S    +   +    DDFR  +P+ QI  VN                 E L Q  L Y 
Sbjct: 372 DQSFSHYSNPQNCGPPDDFRCSDPSKQIWTVN-----------------EALIQKWLSYP 414

Query: 346 -----------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                      ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 415 SGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/283 (35%), Positives = 157/283 (55%), Gaps = 39/283 (13%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTSLKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYVHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GMLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ LIG
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHLIG 791



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++  + +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEECIR-VPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +                                       E+++WG N+Y
Sbjct: 145 GYYHSLALSKAS--------------------------------------EVFSWGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         PQ ++SL  +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 51/101 (50%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVVCGLAIYNFTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E ++E+ F + F
Sbjct: 816 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDNVEETFCLNF 856



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      L +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTLAIPFGTAL 533


>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Cricetulus griseus]
          Length = 1049

 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 193/409 (47%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V++WG D+ GQLGL  +++  + +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIR-VPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCKKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  +ACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W +         DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIDS----EDCFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +       +DDFR  +P+ QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSNPQSCGPADDFRCPDPSKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL   ND+H+   + KFS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLATSNDDHYRTGT-KFSGVDMN 461



 Score =  176 bits (446), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 169/336 (50%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQLIQYDKFYIHEVQDLIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GVLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +  + D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKSIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 749  FFLLIMRELLDPKYGMFQYYEDSRLIWFSDKTFEDSDLFHL------------------- 789

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 790  ----------------------IGVICGLAIYNFTI 803



 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 760 PKYGMFQY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L     L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKRKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 856



 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 130/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V++WG D+ GQLGL  +++  + +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYSWGLDSDGQLGLLGSEEYIR-VPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL   ND+H+   +K  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLATSNDDHYRTGTKFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Gorilla gorilla gorilla]
          Length = 1049

 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 191/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W A         DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYAYNGQCLPDIDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRCPDPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 167/336 (49%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +                       G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKM----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GMLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 789

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 790  ----------------------IGVICGLAIYNFTI 803



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLVGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 856



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Gorilla gorilla gorilla]
          Length = 1057

 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 191/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W A         DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYAYNGQCLPDIDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRCPDPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  168 bits (426), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 167/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +                       G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKM----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 798  ------------------------------IGVICGLAIYNFTI 811



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLVGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 864



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
 gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
 gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
          Length = 1049

 Score =  177 bits (448), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 190/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  NP  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRCPNPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/283 (34%), Positives = 156/283 (55%), Gaps = 39/283 (13%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +                       G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKM----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GMLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ LIG
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHLIG 791



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLVGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNCTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 856



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
            jacchus]
          Length = 1049

 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 109/336 (32%), Positives = 168/336 (50%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ L+    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSLLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRLFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GMLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 789

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 790  ----------------------IGVICGLAIYNFTI 803



 Score =  176 bits (447), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 190/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQRLPDIDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSGPQNCGPPDDFRCPDPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + KFS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-KFSGVDMN 461



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 856



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   +K  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTKFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
           [Ornithorhynchus anatinus]
          Length = 1006

 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 127/397 (31%), Positives = 199/397 (50%), Gaps = 50/397 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LALND G+V+ WG DT GQLGL   + +   +P+ +K L+ + +VQ   GY       
Sbjct: 44  HTLALNDKGQVYAWGLDTDGQLGLPGTE-ECIRVPRNIKSLSDIQIVQVSCGY------- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                +HSLAL+   EVF+WG + +GQLGL   + K Q+ P+ +K L  +  +Q  AG +
Sbjct: 96  -----YHSLALSKGSEVFSWGQNKYGQLGL-GFEFKKQTSPQLIKSLLGIPFMQIAAGGA 149

Query: 126 HCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQ-------------DSHTTITSL 168
           H  VLT SG +    + N  G    +D +     NL++             + HT   +L
Sbjct: 150 HSFVLTLSGAIFGWGR-NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--AAL 206

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
              G ++T+G   YGQ+G +NS +    P++V  L+   +  +ACG  H+     S  R+
Sbjct: 207 TKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRI 265

Query: 229 YAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGD 287
           Y+FG+G   QL +   S  K+P  + G W       +  + S +       VK+I+SGGD
Sbjct: 266 YSFGLGGNGQLGTGSTSNRKSPFTVKGNWF----PYSEQDPSNIDGEQYYCVKRIFSGGD 321

Query: 288 HSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKS--DETLDQDLLLY 345
            S        +   SDDFR  +P+ QI  VN       E  +++  S     L  ++   
Sbjct: 322 QSFSHYCSPQNLGPSDDFRCPDPSKQIWTVN-------EALIQRWLSYTPGRLPVEIANE 374

Query: 346 LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
           ++  F S GC+NGSFL + ND+H+   S +FS + ++
Sbjct: 375 IDGTFSSAGCLNGSFLAMSNDDHYRTGS-RFSGVDMN 410



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/344 (31%), Positives = 167/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   V    +    FN  L   L+VL+ L+ 
Sbjct: 492  VLENWWSVLEPPLFLKIVQLFKEVVVHLLKLYKVGIPPSERRIFNTFLHTALKVLEILHR 551

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +                       G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 552  VNEKM----------------------GQIIQYDRFYIHEVQDLIDIRNDYINWVQQQAY 589

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 590  GMDINHGLTELTDIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSIFLP 649

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GEEA 
Sbjct: 650  VIESVNPCLILIVRRENIVGDAMEVLRKTKNVDYKKPLKV------------IFVGEEAV 697

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YEE+R IWFS+ TFED +++ L           
Sbjct: 698  DAGGVRKEFFLLIMRELLDPKYGMFRYYEESRLIWFSDKTFEDSDLFHL----------- 746

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 747  ------------------------------IGVICGLAIYNFTI 760



 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YEE+R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 717 PKYGMFRY----YEESRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 772

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 773 LLKKKPSLDDLKELIPDVGRSMQQLLDYPEDDVEETFCLNF 813



 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 43/218 (19%)

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           ++  + G  H+LALND G+V+ WG DT GQLGL   ++    +P+ +K L+ + +VQ   
Sbjct: 35  IVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEE-CIRVPRNIKSLSDIQIVQVSC 93

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+                                         E+++WG N+Y
Sbjct: 94  GYYHSLALSKGS--------------------------------------EVFSWGQNKY 115

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   IA G  HSFVL+ S   ++ +G     QL  +
Sbjct: 116 GQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 174

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 175 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 212



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL + ND+H+   S+  GVDM   +  Y  + + +   +   V+  
Sbjct: 375 IDGTFSSAGCLNGSFLAMSNDDHYRTGSRFSGVDMNAARLLYHRLIQPDHPQIAQQVA-- 432

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 433 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDANNFTTIAIPFGTAL 482


>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
          Length = 1027

 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 190/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTEIACGRQHTSTFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  NP  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRCPNPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/283 (34%), Positives = 156/283 (55%), Gaps = 39/283 (13%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +                       G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKM----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GMLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ LIG
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHLIG 791



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLVGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNCTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKKEPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 856



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 1057

 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 190/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRCPDPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + KFS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-KFSGVDMN 461



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 168/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 798  ------------------------------IGVICGLAIYNFTI 811



 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 864



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   +K  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTKFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
          Length = 1057

 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 192/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVSCGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF+WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFSWGQNKYGQLGL-GIDCKKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W +         DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPPDIDS----QEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S        +    DDFR  +P+ QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYFSPQNCGPPDDFRCPDPSKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + KFS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSCGCLNGSFLAVSNDDHYRTGT-KFSGVDMN 461



 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 167/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G                +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVSHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 798  ------------------------------IGVICGLAIYNFTI 811



 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 130/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVSC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +                                       E+++WG N+Y
Sbjct: 145 GYYHSLALSKAS--------------------------------------EVFSWGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDVEETFCLNF 864



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   +K  GVDM   +  +  + +++   +   V+  
Sbjct: 426 IDGTFSSCGCLNGSFLAVSNDDHYRTGTKFSGVDMNAARLLFHKLIQLDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
 gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
 gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
          Length = 1057

 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 190/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  NP  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRCPNPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 156/291 (53%), Gaps = 47/291 (16%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +                       G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKM----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ LIG
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHLIG 799



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLVGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 90.5 bits (223), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNCTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 864



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1049

 Score =  176 bits (447), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 190/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRCPDPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + KFS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-KFSGVDMN 461



 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 168/336 (50%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GMLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 789

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 790  ----------------------IGVICGLAIYNFTI 803



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 856



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   +K  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTKFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pongo abelii]
          Length = 1050

 Score =  176 bits (447), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 191/386 (49%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  HCL L 
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           S             G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 154 SD------------GQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT +  L 
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G   YGQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 259 KSGGVFTFGAGSYGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    ++A  D    H    +VK+I+SGGD 
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSGGDQ 373

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +K  +   + DFR +N A     +N E +    +++ +  +  T++      +  
Sbjct: 374 TFVLCSKYENYSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNANTING-----VVQ 428

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 149/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQVCPKYFMKLVNLYKGAVLYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++ + DI+ DY  W   +     
Sbjct: 603  KV-----------------------KHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKA 639

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 700  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 792



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 131/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   ++    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L S G                                      + +TWG N +GQ+
Sbjct: 148 HCLALASDG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEK 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 97.4 bits (241), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 823 GLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 857



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSMILEQILN 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Callithrix jacchus]
          Length = 1057

 Score =  176 bits (447), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 190/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQRLPDIDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSGPQNCGPPDDFRCPDPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + KFS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-KFSGVDMN 461



 Score =  171 bits (434), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 168/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ L+    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSLLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRLFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 798  ------------------------------IGVICGLAIYNFTI 811



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 864



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   +K  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTKFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Gorilla gorilla gorilla]
          Length = 979

 Score =  176 bits (446), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 191/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W A         DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYAYNGQCLPDIDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRCPDPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  153 bits (386), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 146/278 (52%), Gaps = 47/278 (16%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +                       G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKM----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSE 1076
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSD 786



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLVGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Pan troglodytes]
 gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  176 bits (446), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 192/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W   P       D  + +     VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWY--PYNGQCLPD--IDYEEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRCPDPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 167/336 (49%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +                       G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKM----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GMLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 789

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 790  ----------------------IGVICGLAIYNFTI 803



 Score =  110 bits (274), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLVGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 856



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
          Length = 835

 Score =  176 bits (446), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 193/409 (47%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V++WG D+ GQLGL  +++  + +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIR-VPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCKKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  +ACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W +         DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIDS----EDCFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +       +DDFR  +P+ QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSNPQSCGPADDFRCPDPSKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL   ND+H+   + KFS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLATSNDDHYRTGT-KFSGVDMN 461



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 148/270 (54%), Gaps = 39/270 (14%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQLIQYDKFYIHEVQDLIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GVLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +  + D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKSIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSE 1076
            F +L+++E+LDPKYGMF+ YE++R IWFS+
Sbjct: 749  FFLLIMRELLDPKYGMFQYYEDSRLIWFSD 778



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 131/278 (47%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V++WG D+ GQLGL  +++  + +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYSWGLDSDGQLGLLGSEEYIR-VPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +                                       E++ WG N+Y
Sbjct: 145 GYYHSLALSKAS--------------------------------------EVFCWGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL   ND+H+   +K  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLATSNDDHYRTGTKFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
           [Pan troglodytes]
 gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  176 bits (446), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 192/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W   P       D  + +     VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWY--PYNGQCLPD--IDYEEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRCPDPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 167/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +                       G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKM----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 798  ------------------------------IGVICGLAIYNFTI 811



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLVGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 864



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
          Length = 1056

 Score =  176 bits (446), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 130/408 (31%), Positives = 193/408 (47%), Gaps = 66/408 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIPFMQIAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQDSHTT-----------ITS 167
           G +H  VLT SG +    + N  G    +D +     NL++   T              +
Sbjct: 198 GGAHSFVLTLSGAIFGWGR-NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAA 256

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  R
Sbjct: 257 LTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGR 315

Query: 228 LYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           +Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SGG
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPDFDS----EEYFCVKRIFSGG 371

Query: 287 DHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY- 345
           D S    +   +    DDFR  +P+ QI  VN                 E L Q  L Y 
Sbjct: 372 DQSFSHYSNPQNCGPPDDFRYPDPSKQIWTVN-----------------EALIQKWLSYP 414

Query: 346 -----------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                      ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 415 SGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 169/344 (49%), Gaps = 89/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +   +   I FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGPPSERRI-FNSFLHTALKVLEILHR 601

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N ++                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 602  VNEKS----------------------GQIIQYDKFYIHEVQELIDIRNDYIIWVQQQAY 639

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 640  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 699

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 700  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 747

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 748  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 796

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 797  ------------------------------IGVICGLAIYNFTI 810



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 127/278 (45%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         PQ ++SL+ +P   IA G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 74/101 (73%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 767 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 822

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L+DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 823 LLKKKPSLEDLKELVPDVGRSMQQLLDYPEDDVEETFCLNF 863



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQIAQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
          Length = 975

 Score =  176 bits (446), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 191/386 (49%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  HCL L 
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           S             G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 154 SD------------GQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT +  L 
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G   YGQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 259 KSGGVFTFGAGSYGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    ++A  D    H    +VK+I+SGGD 
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSGGDQ 373

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +K  +   + DFR +N A     +N E +    +++ +  +  T++      +  
Sbjct: 374 TFVLCSKYENYSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNANTING-----VVQ 428

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 149/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQVCPKYFMKLVNLYKGAVLYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++ + DI+ DY  W   +     
Sbjct: 603  KV-----------------------KHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKA 639

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTMEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 700  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 792



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 130/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG      K    P+++  LA   ++    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHVREGNK----PEQIGALADQHIIHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L S G                                      + +TWG N +GQ+
Sbjct: 148 HCLALASDG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEK 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 823 GLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 857



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSMILEQILN 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
          Length = 1049

 Score =  176 bits (446), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 168/336 (50%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GMLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 789

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 790  ----------------------IGVICGLAIYNFTI 803



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/396 (32%), Positives = 185/396 (46%), Gaps = 67/396 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCKKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W+  P       D  +       VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWL--PYNGQCPPD--IDSEEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S        +    DDFR  +P+ QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYCSPQNCGPPDDFRCPDPSKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHF 369
                       ++  F S GC+NGSFL V ND+H+
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHY 449



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 856



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+    +  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGVRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
           mulatta]
          Length = 1049

 Score =  176 bits (446), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 190/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + ++Q   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIIQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDTDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSNPQNCGPPDDFRCPDPTKQIWTVN-----------------EVLIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  176 bits (445), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 168/336 (50%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GMLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 789

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 790  ----------------------IGVICGLAIYNFTI 803



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + ++Q   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIIQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 856



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Papio anubis]
          Length = 1049

 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 190/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + ++Q   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIIQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDTDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSNPQNCGPPDDFRCPDPTKQIWTVN-----------------EVLIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  176 bits (445), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 168/336 (50%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GMLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 789

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 790  ----------------------IGVICGLAIYNFTI 803



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + ++Q   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIIQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 856



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
 gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
          Length = 1057

 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 130/408 (31%), Positives = 193/408 (47%), Gaps = 66/408 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIPFMQIAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQDSHTT-----------ITS 167
           G +H  VLT SG +    + N  G    +D +     NL++   T              +
Sbjct: 198 GGAHSFVLTLSGAIFGWGR-NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAA 256

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  R
Sbjct: 257 LTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGR 315

Query: 228 LYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           +Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SGG
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPDFDS----EEYFCVKRIFSGG 371

Query: 287 DHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY- 345
           D S    +   +    DDFR  +P+ QI  VN                 E L Q  L Y 
Sbjct: 372 DQSFSHYSNPQNCGPPDDFRYPDPSKQIWTVN-----------------EALIQKWLSYP 414

Query: 346 -----------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                      ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 415 SGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 168/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N ++                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKS----------------------GQIIQYDKFYIHEVQELIDIRNDYIIWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 798  ------------------------------IGVICGLAIYNFTI 811



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 127/278 (45%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         PQ ++SL+ +P   IA G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 74/101 (73%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L+DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKKKPSLEDLKELVPDVGRSMQQLLDYPEDDVEETFCLNF 864



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQIAQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
 gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
 gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
 gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
          Length = 1049

 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 168/336 (50%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQLIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GVLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 789

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 790  ----------------------IGVICGLAIYNFTI 803



 Score =  176 bits (445), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 193/411 (46%), Gaps = 72/411 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL+ ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D + Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCQKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  +ACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIA--SPVAMTAGEDSLVSHSGGLVVKKIY 283
           R+Y+FG+G   QL +   S  K+P  + G W +         G +          VK+I+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIGSEDY------FCVKRIF 368

Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLL 343
           SGGD S    +   +    DDFR  +P+ QI  VN                 E L Q  L
Sbjct: 369 SGGDQSFSHYSSPQNCGPPDDFRCSDPSKQIWTVN-----------------EALIQKWL 411

Query: 344 LY------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
            Y            ++  F S GC+NGSFL + ND+H+   + +FS + ++
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAISNDDHYRTGT-RFSGVDMN 461



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 129/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVACGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL+ +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLQGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score =  110 bits (276), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L     L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKRKPSLDDLKELMPAVGRSMQQLLDYPEDDIEETFCLNF 856



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL + ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAISNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDCNNFTTIAIPFGTAL 533


>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Papio anubis]
          Length = 1057

 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 190/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + ++Q   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIIQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDTDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSNPQNCGPPDDFRCPDPTKQIWTVN-----------------EVLIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 168/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 798  ------------------------------IGVICGLAIYNFTI 811



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + ++Q   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIIQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 864



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo abelii]
          Length = 1049

 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 168/336 (50%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GMLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 789

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 790  ----------------------IGVICGLAIYNFTI 803



 Score =  174 bits (440), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 189/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSE-ECIRVPRNIKSLSDIQIVQVACGYC--- 147

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 148 ---------HSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRCPDPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  110 bits (274), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLVGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYCHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 856



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Ovis aries]
          Length = 1057

 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 130/408 (31%), Positives = 193/408 (47%), Gaps = 66/408 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIPFMQIAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQDSHTT-----------ITS 167
           G +H  VLT SG +    + N  G    +D +     NL++   T              +
Sbjct: 198 GGAHSFVLTLSGAIFGWGR-NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAA 256

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  R
Sbjct: 257 LTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGR 315

Query: 228 LYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           +Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SGG
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPDFDS----EEYFCVKRIFSGG 371

Query: 287 DHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY- 345
           D S    +   +    DDFR  +P+ QI  VN                 E L Q  L Y 
Sbjct: 372 DQSFSHYSNPQNCGPPDDFRYPDPSKQIWTVN-----------------EALIQKWLSYP 414

Query: 346 -----------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                      ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 415 SGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 168/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N ++                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKS----------------------GQIIQYDKFYIHEVQELIDIRNDYIIWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 798  ------------------------------IGVICGLAIYNFTI 811



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 127/278 (45%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         PQ ++SL+ +P   IA G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 74/101 (73%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L+DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKKKPSLEDLKELVPDVGRSMQQLLDYPEDDVEETFCLNF 864



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Ovis aries]
          Length = 1049

 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 128/400 (32%), Positives = 188/400 (47%), Gaps = 65/400 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIPFMQIAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQDSHTT-----------ITS 167
           G +H  VLT SG +    + N  G    +D +     NL++   T              +
Sbjct: 198 GGAHSFVLTLSGAIFGWGR-NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAA 256

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  R
Sbjct: 257 LTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGR 315

Query: 228 LYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           +Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SGG
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPDFDS----EEYFCVKRIFSGG 371

Query: 287 DHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY- 345
           D S    +   +    DDFR  +P+ QI  VN                 E L Q  L Y 
Sbjct: 372 DQSFSHYSNPQNCGPPDDFRYPDPSKQIWTVN-----------------EALIQKWLSYP 414

Query: 346 -----------LETVFLSPGCMNGSFLQVENDEHFSCNSK 374
                      ++  F S GC+NGSFL V ND+H+   ++
Sbjct: 415 SGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTR 454



 Score =  173 bits (439), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 168/336 (50%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N ++                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKS----------------------GQIIQYDKFYIHEVQELIDIRNDYIIWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GMLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 789

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 790  ----------------------IGVICGLAIYNFTI 803



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 127/278 (45%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         PQ ++SL+ +P   IA G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 74/101 (73%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L+DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKKKPSLEDLKELVPDVGRSMQQLLDYPEDDVEETFCLNF 856



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
          Length = 1054

 Score =  176 bits (445), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 190/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + ++Q   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIIQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDTDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSNPQNCGPPDDFRCPDPTKQIWTVN-----------------EVLIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  170 bits (431), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 168/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 540  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 599

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 600  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 637

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 638  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 697

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 698  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 745

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 746  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 794

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 795  ------------------------------IGVICGLAIYNFTI 808



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 129/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++  + +P+ +K L+ + ++Q   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEECIR-VPRNIKSLSDIQIIQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 765 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 820

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 821 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 861



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +     +  I+ +  +  +S  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAAR-----LLLIQPDHPQ--ISQQ 478

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 479 VAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 530


>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 979

 Score =  176 bits (445), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 190/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRCPDPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + KFS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-KFSGVDMN 461



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/278 (33%), Positives = 147/278 (52%), Gaps = 47/278 (16%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSE 1076
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSD 786



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   +K  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTKFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
 gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
 gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
 gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
          Length = 1057

 Score =  176 bits (445), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 190/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + ++Q   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIIQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDTDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSNPQNCGPPDDFRCPDPTKQIWTVN-----------------EVLIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 168/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 798  ------------------------------IGVICGLAIYNFTI 811



 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + ++Q   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIIQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 864



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
          Length = 979

 Score =  176 bits (445), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 190/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  NP  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRCPNPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 146/278 (52%), Gaps = 47/278 (16%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +                       G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKM----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSE 1076
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSD 786



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLVGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Anolis carolinensis]
          Length = 1060

 Score =  176 bits (445), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 127/403 (31%), Positives = 196/403 (48%), Gaps = 53/403 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+L LND G+V+ WG    GQLGL   ++ ++ +P+ +K L+ V +VQ   GY    
Sbjct: 92  GEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTR-VPRNIKSLSDVQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF+WG + HGQLGL   D K Q+ P+ +K L  +   Q  A
Sbjct: 147 --------YHSLALSKGSEVFSWGQNKHGQLGL-GYDLKKQTSPQLIKSLLGIPFGQIAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQ-------------DSHTTI 165
           G +H   LT SG V    + N  G    +D +     NL++             + HT  
Sbjct: 198 GGAHSFALTLSGAVFGWGR-NKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTA- 255

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L   G ++T+G   YGQ+G N++   +  P++V  L+   +  IACG  H+     S 
Sbjct: 256 -ALTKEGGVFTFGAGGYGQLGHNSTGHEIN-PRKVFELMGNIVTQIACGRQHTSAFVPST 313

Query: 226 SRLYAFGIGSAVQLD-SPKSVHKTPQLIHGPWIA--SPVAMTAGEDSLVSHSGGLVVKKI 282
            R+Y+FG+G   QL     S  K+P  + G ++     + + +  D          V++I
Sbjct: 314 GRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNFLPFNGQIPLNSDRDEY------YYVRRI 367

Query: 283 YSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVN---FERLKECEREVEQLKSDETLD 339
           +SGGD S        D + +DDFR  N + QI  VN    +RL  C          E  +
Sbjct: 368 FSGGDQSFSHYVTLQDLIPADDFRHSNGSKQIWTVNEAFIQRLLNCSSSGAGRLPVEIAN 427

Query: 340 QDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
           +     ++  F S GC+NGSFL + ND+H+   S +FS + ++
Sbjct: 428 E-----IDGTFSSAGCLNGSFLAISNDDHYRT-SARFSGVDMN 464



 Score =  173 bits (438), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 155/291 (53%), Gaps = 47/291 (16%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ L+    F +++ ++K  +++LL+   +    +    F   L   L+VL+ L+ 
Sbjct: 546  VLENWWSLLEPPLFLKIVELYKDVVVHLLKLYKMGIPASEQRIFTSCLHTSLKVLEILHR 605

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N  +                      G+ + Y  FY+ ++  + DIR DYF WI  +  
Sbjct: 606  VNERS----------------------GQIIQYDKFYVHEIQDLIDIRNDYFNWIQQQAY 643

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G                +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +   F   F P
Sbjct: 644  GMDISHGLNELGDLPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAVDQAHRQNFSSIFLP 703

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V RDNIV D +  L +    D+KKPLKV             F GEEA 
Sbjct: 704  VYESVNPCLILIVRRDNIVGDAMEVLRKTKNVDYKKPLKV------------IFVGEEAV 751

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ LIG
Sbjct: 752  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHLIG 802



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 74/101 (73%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+ + FPLALYKK
Sbjct: 771 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVVCGLAIYNFTIVELHFPLALYKK 826

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L++   L+DLK+L P + +S+Q +LDY E D+ED F + F
Sbjct: 827 LLNKKPSLEDLKELMPDVGRSMQQLLDYPEDDIEDTFCLNF 867



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 127/278 (45%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E    KS+  P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHE----KSRKRPEQVGALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +L LND G+V+ WG    GQLGL   ++ ++ +P+ +K L+ V +VQ   
Sbjct: 96  ----------TLTLNDKGQVYAWGFAADGQLGLPGTEEYTR-VPRNIKSLSDVQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+                                         E+++WG N++
Sbjct: 145 GYYHSLALSKGS--------------------------------------EVFSWGQNKH 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   IA G  HSF L+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLS-GAVFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V ++ GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGV 263



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL + ND+H+  +++  GVDM   +  +  + + E   +   V+  
Sbjct: 429 IDGTFSSAGCLNGSFLAISNDDHYRTSARFSGVDMNAARLLFHKLIQPEHPHISQQVA-- 486

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR+FLTLP      +   +  L +PFA A+
Sbjct: 487 --ASLEKNLIPKLTSSLPDVEALRLFLTLPECPLMNDSNNYMTLAIPFATAI 536


>gi|74217026|dbj|BAE26617.1| unnamed protein product [Mus musculus]
          Length = 857

 Score =  176 bits (445), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 168/336 (50%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 351  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 410

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 411  VNEKT----------------------GQLIQYDKFYIHEVQELIDIRNDYINWVQQQAY 448

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 449  GVLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 508

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 509  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 556

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 557  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 597

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 598  ----------------------IGVICGLAIYNFTI 611



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 130/321 (40%), Gaps = 75/321 (23%)

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
             G  HS  L   G +F WG +  GQLGL   D+  + +P  +K L S  +V  C G  H
Sbjct: 4   AAGGAHSFVLTLSGAIFGWGRNKFGQLGLN--DENDRYVPNLLKSLRSQKIVYICCGEDH 61

Query: 127 CLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG 186
              LT  G V                                      +T+G   YGQ+G
Sbjct: 62  TAALTKEGGV--------------------------------------FTFGAGGYGQLG 83

Query: 187 INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS-PKSV 245
            +NS +    P++V  L+   +  +ACG  H+     S  R+Y+FG+G   QL +   S 
Sbjct: 84  -HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 142

Query: 246 HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVLSDDF 305
            K+P  + G W +        +D  +       VK+I+SGGD S    +   +    DDF
Sbjct: 143 RKSPFTVKGNWFS--YNGQCPQD--IGSEDYFCVKRIFSGGDQSFSHYSSPQNCGPPDDF 198

Query: 306 RVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY------------LETVFLSP 353
           R  +P+ QI  VN                 E L Q  L Y            ++  F S 
Sbjct: 199 RCSDPSKQIWTVN-----------------EALIQKWLSYPSGRFPVEIANEIDGTFSSS 241

Query: 354 GCMNGSFLQVENDEHFSCNSK 374
           GC+NGSFL + ND+H+   ++
Sbjct: 242 GCLNGSFLAISNDDHYRTGTR 262



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 568 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 623

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L     L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 624 LLKRKPSLDDLKELMPAVGRSMQQLLDYPEDDIEETFCLNF 664



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 54/132 (40%), Gaps = 16/132 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS  L   G +F WG +  GQLGL   D+  + +P  +K L S  +V  C G  H 
Sbjct: 5   AGGAHSFVLTLSGAIFGWGRNKFGQLGLN--DENDRYVPNLLKSLRSQKIVYICCGEDHT 62

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
             LT   G            VFT+G   +GQLG  S   +    P++V  L    V Q  
Sbjct: 63  AALTKEGG------------VFTFGAGGYGQLGHNSTSHEIN--PRKVFELMGSIVTQVA 108

Query: 122 AGYSHCLVLTSS 133
            G  H      S
Sbjct: 109 CGRQHTSAFVPS 120



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL + ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 234 IDGTFSSSGCLNGSFLAISNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 291

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 292 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDCNNFTTIAIPFGTAL 341


>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Ovis aries]
          Length = 979

 Score =  176 bits (445), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/408 (31%), Positives = 193/408 (47%), Gaps = 66/408 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIPFMQIAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQDSHTT-----------ITS 167
           G +H  VLT SG +    + N  G    +D +     NL++   T              +
Sbjct: 198 GGAHSFVLTLSGAIFGWGR-NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAA 256

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  R
Sbjct: 257 LTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGR 315

Query: 228 LYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           +Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SGG
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPDFDS----EEYFCVKRIFSGG 371

Query: 287 DHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY- 345
           D S    +   +    DDFR  +P+ QI  VN                 E L Q  L Y 
Sbjct: 372 DQSFSHYSNPQNCGPPDDFRYPDPSKQIWTVN-----------------EALIQKWLSYP 414

Query: 346 -----------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                      ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 415 SGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  152 bits (385), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 147/278 (52%), Gaps = 47/278 (16%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N ++                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKS----------------------GQIIQYDKFYIHEVQELIDIRNDYIIWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSE 1076
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSD 786



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 127/278 (45%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         PQ ++SL+ +P   IA G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Callithrix jacchus]
          Length = 979

 Score =  176 bits (445), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 190/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQRLPDIDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSGPQNCGPPDDFRCPDPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + KFS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-KFSGVDMN 461



 Score =  155 bits (393), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/278 (33%), Positives = 147/278 (52%), Gaps = 47/278 (16%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ L+    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSLLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRLFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSE 1076
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSD 786



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   +K  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTKFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
          Length = 1057

 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 193/411 (46%), Gaps = 72/411 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL+ ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D + Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCQKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  +ACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIA--SPVAMTAGEDSLVSHSGGLVVKKIY 283
           R+Y+FG+G   QL +   S  K+P  + G W +         G +          VK+I+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIGSEDY------FCVKRIF 368

Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLL 343
           SGGD S    +   +    DDFR  +P+ QI  VN                 E L Q  L
Sbjct: 369 SGGDQSFSHYSSPQNCGPPDDFRCSDPSKQIWTVN-----------------EALIQKWL 411

Query: 344 LY------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
            Y            ++  F S GC+NGSFL + ND+H+   + +FS + ++
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAISNDDHYRTGT-RFSGVDMN 461



 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 156/291 (53%), Gaps = 47/291 (16%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQLIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G                +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GVDVSHGVTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ LIG
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHLIG 799



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 129/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVACGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL+ +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLQGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGIICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L     L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKRKPSLDDLKELMPAVGRSMQQLLDYPEDDIEETFCLNF 864



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL + ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAISNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDCNNFTTIAIPFGTAL 533


>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
          Length = 1049

 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 167/336 (49%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N  T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNERT----------------------GQLIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GVLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 789

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 790  ----------------------IGVICGLAIYNFTI 803



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 187/403 (46%), Gaps = 71/403 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL+ ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   + + Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIECQKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIA--SPVAMTAGEDSLVSHSGGLVVKKIY 283
           R+Y+FG+G   QL +   S  K+P  + G W +         G +          VK+I+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIGSEDY------FCVKRIF 368

Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLL 343
           SGGD S    +        DDFR  +P+ QI  VN                 E L Q  L
Sbjct: 369 SGGDQSFSHYSSPQSCGPPDDFRRSDPSKQIWTVN-----------------EALIQKWL 411

Query: 344 LY------------LETVFLSPGCMNGSFLQVENDEHFSCNSK 374
            Y            ++  F S GC+NGSFL V ND+H+   ++
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTR 454



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 129/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL+ +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLQGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L     L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKRKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 856



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHRLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDCNNFTTIAIPFGTAL 533


>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
 gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
          Length = 1057

 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 193/411 (46%), Gaps = 72/411 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL+ ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D + Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCQKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  +ACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIA--SPVAMTAGEDSLVSHSGGLVVKKIY 283
           R+Y+FG+G   QL +   S  K+P  + G W +         G +          VK+I+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIGSEDY------FCVKRIF 368

Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLL 343
           SGGD S    +   +    DDFR  +P+ QI  VN                 E L Q  L
Sbjct: 369 SGGDQSFSHYSSPQNCGPPDDFRCSDPSKQIWTVN-----------------EALIQKWL 411

Query: 344 LY------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
            Y            ++  F S GC+NGSFL + ND+H+   + +FS + ++
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAISNDDHYRTGT-RFSGVDMN 461



 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 167/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQLIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G                +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GVDVSHGVTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 798  ------------------------------IGVICGLAIYNFTI 811



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 129/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVACGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL+ +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLQGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score =  110 bits (276), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L     L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKRKPSLDDLKELMPAVGRSMQQLLDYPEDDIEETFCLNF 864



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL + ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAISNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDCNNFTTIAIPFGTAL 533


>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Nomascus leucogenys]
          Length = 1057

 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 190/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLVGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRCPDPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  169 bits (428), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 167/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ ++ LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVRLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 798  ------------------------------IGVICGLAIYNFTI 811



 Score =  110 bits (276), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SLV +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 864



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Nomascus leucogenys]
          Length = 1049

 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 190/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLVGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRCPDPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 167/336 (49%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ ++ LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVRLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GMLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 789

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 790  ----------------------IGVICGLAIYNFTI 803



 Score =  110 bits (276), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SLV +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 856



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
           [Pan troglodytes]
          Length = 979

 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 192/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W   P       D  + +     VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWY--PYNGQCLPD--IDYEEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRCPDPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  152 bits (385), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 146/278 (52%), Gaps = 47/278 (16%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +                       G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKM----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSE 1076
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSD 786



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLVGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pan paniscus]
 gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 190/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRCPDPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 167/336 (49%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +                       G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKM----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 641  GMLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 701  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 789

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 790  ----------------------IGVICGLAIYNFTI 803



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLVGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 760 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 856



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
          Length = 1057

 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/396 (32%), Positives = 185/396 (46%), Gaps = 67/396 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCKKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W+  P       D  +       VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWL--PYNGQCPPD--IDSEEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S        +    DDFR  +P+ QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYCSPQNCGPPDDFRCPDPSKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHF 369
                       ++  F S GC+NGSFL V ND+H+
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHY 449



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 168/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 798  ------------------------------IGVICGLAIYNFTI 811



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 864



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+    +  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGVRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
          Length = 1066

 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 193/411 (46%), Gaps = 72/411 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL+ ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 101 GEAHTLALNDKGQVYAWGLDSDGQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 155

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D + Q+ P+ +K L  +  +Q  A
Sbjct: 156 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCQKQTSPQLIKSLLGIPFMQVAA 206

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 207 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 264

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  +ACG  H+     S  
Sbjct: 265 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSG 323

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIA--SPVAMTAGEDSLVSHSGGLVVKKIY 283
           R+Y+FG+G   QL +   S  K+P  + G W +         G +          VK+I+
Sbjct: 324 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIGSEDY------FCVKRIF 377

Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLL 343
           SGGD S    +   +    DDFR  +P+ QI  VN                 E L Q  L
Sbjct: 378 SGGDQSFSHYSSPQNCGPPDDFRCSDPSKQIWTVN-----------------EALIQKWL 420

Query: 344 LY------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
            Y            ++  F S GC+NGSFL + ND+H+   + +FS + ++
Sbjct: 421 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAISNDDHYRTGT-RFSGVDMN 470



 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 167/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 552  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 611

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 612  VNEKT----------------------GQLIQYDKFYIHEVQELIDIRNDYINWVQQQAY 649

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G                +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 650  GVDVSHGVTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 709

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 710  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 757

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 758  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 806

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 807  ------------------------------IGVICGLAIYNFTI 820



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 129/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 51  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVACGEAH-- 104

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL+ +++    +P+ +K L+ + +VQ   
Sbjct: 105 ----------TLALNDKGQVYAWGLDSDGQLGLQGSEE-CIRVPRNIKSLSDIQIVQVAC 153

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 154 GYYHSLALSKASEVFC--------------------------------------WGQNKY 175

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 176 GQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 234

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 235 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 272



 Score =  110 bits (276), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 777 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 832

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L     L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 833 LLKRKPSLDDLKELMPAVGRSMQQLLDYPEDDIEETFCLNF 873



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL + ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 435 IDGTFSSSGCLNGSFLAISNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 492

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 493 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDCNNFTTIAIPFGTAL 542


>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
           guttata]
          Length = 991

 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/399 (32%), Positives = 192/399 (48%), Gaps = 48/399 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG  T GQLGL   + +   +P+ ++ L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLATDGQLGLPGTE-ECVRVPRNIRSLSEIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF+WG + +GQLGL   + K Q+ P+ +K L  +   Q  A
Sbjct: 147 --------YHSLALSKGSEVFSWGQNKYGQLGL-GYEYKKQTSPQMIKSLLGIPFAQIAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSD------------PSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +    +      G   D             SQ V      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  I CG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSVVTQITCGRQHTTAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G WI          DS   +     VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGTTSNRKSPFTVKGSWIPFSPQCPMSTDSEECY----CVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKS--DETLDQDLL 343
           GD S        + V  DDFR  +   QI  VN       E  +++L S     L  ++ 
Sbjct: 371 GDQSFAHYFYPQNMVPPDDFRYPDLLKQIWTVN-------EMFIQRLLSFPSGRLPVEIA 423

Query: 344 LYLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
             ++  F S GC+NGSFL + ND+H+   S +FS + ++
Sbjct: 424 NEIDGTFSSAGCLNGSFLALSNDDHYK-TSARFSGVDMN 461



 Score =  114 bits (286), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 74/101 (73%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YEE+R IWFS+ TFED ++  LIG +CGLAIYN+TI+++PFPLALYKK
Sbjct: 702 PKYGMFRY----YEESRLIWFSDKTFEDSDLFHLIGVVCGLAIYNFTIVDLPFPLALYKK 757

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L++   L DLK+L P + + +Q +LDY E D+E+ F + F
Sbjct: 758 LLNKKPSLDDLKELIPDVGRGMQQLLDYPEDDIEEAFCLNF 798



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 61/130 (46%), Positives = 82/130 (63%), Gaps = 14/130 (10%)

Query: 960  IQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVN 1019
            + ++ A  Q    LFL  F   ++N  L + V RDNIV D +  L +    D+KKPLKV 
Sbjct: 618  MAVDQAHRQNLSSLFLPVF--ESVNPCLILMVRRDNIVGDAVEVLRKTKNVDYKKPLKV- 674

Query: 1020 DTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTF 1079
                        F GEEA DAGGVR+EF +L+++E+LDPKYGMF+ YEE+R IWFS+ TF
Sbjct: 675  -----------IFVGEEAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEESRLIWFSDKTF 723

Query: 1080 EDQNMYFLIG 1089
            ED +++ LIG
Sbjct: 724  EDSDLFHLIG 733



 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 127/278 (45%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E A K+    P+ V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKARKR----PEHVGALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG  T GQLGL   ++  + +P+ ++ L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLATDGQLGLPGTEECVR-VPRNIRSLSEIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+                                         E+++WG N+Y
Sbjct: 145 GYYHSLALSKGS--------------------------------------EVFSWGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P A IA G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             +    P L+        V +  GED  + ++  GG+
Sbjct: 226 DDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGV 263



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL + ND+H+  +++  GVDM   +  +  + + E   +   V+  
Sbjct: 426 IDGTFSSAGCLNGSFLALSNDDHYKTSARFSGVDMNAARLLFHKLIQPEHTHISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR++LTLP      +      L +PF  A+
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRLYLTLPECPLMSDENNFTTLAIPFGAAI 533


>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Papio anubis]
          Length = 979

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 190/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + ++Q   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIIQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDTDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSNPQNCGPPDDFRCPDPTKQIWTVN-----------------EVLIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/278 (33%), Positives = 147/278 (52%), Gaps = 47/278 (16%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSE 1076
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSD 786



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + ++Q   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIIQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pan paniscus]
 gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 190/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRCPDPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 167/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +                       G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKM----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 798  ------------------------------IGVICGLAIYNFTI 811



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLVGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 864



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|349605413|gb|AEQ00660.1| putative E3 ubiquitin-protein ligase HERC4-like protein, partial
            [Equus caballus]
          Length = 911

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 168/336 (50%), Gaps = 79/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
                W+ ++    F +++ +FK+ +++LL++     ++     FN  L   L+VL+ L+ 
Sbjct: 404  VLEKWWSVLEPPLFLKIVELFKEVVVHLLKEYKRSIASPERRIFNSFLHTALKVLEILHR 463

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +                      GG+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 464  VNEKI---------------------GGQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 502

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 503  GMLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 562

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 563  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 610

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 611  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 651

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 652  ----------------------IGVICGLAIYNFTI 665



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 165/373 (44%), Gaps = 64/373 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  AG +H  
Sbjct: 6   GYYHSLALSKASEVFCWGQNKYGQLGL-GIDYKKQASPQLIKSLLGIPFMQVAAGGAHSF 64

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           VLT +            G +F WG +  GQLGL   D+  +  P  +K L +  +V  C 
Sbjct: 65  VLTLS------------GAIFGWGRNKFGQLGLN--DENDRYFPNLLKSLRTQKIVYICC 110

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H   LT  G V                                      +T+G   Y
Sbjct: 111 GEDHTAALTKEGGV--------------------------------------FTFGAGGY 132

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS- 241
           GQ+G +NS +    P++V  L+   +  IACG  H+     S  R+Y+FG+G   QL + 
Sbjct: 133 GQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 191

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVL 301
             S  K+P  + G W   P       D  +       VK+I+SGGD S    +   +   
Sbjct: 192 STSNRKSPFTVKGNWF--PYNGQCPTD--IDSEEYFCVKRIFSGGDQSFAHYSNPQNCRP 247

Query: 302 SDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSFL 361
            DDFR  +P+ QI  VN   +++           E  ++     ++  F S GC+NGSFL
Sbjct: 248 PDDFRCTDPSKQIWTVNEALIQKWLSYPSGRVPVEIANE-----IDGTFSSSGCLNGSFL 302

Query: 362 QVENDEHFSCNSK 374
            V ND+H+   +K
Sbjct: 303 AVSNDDHYKTGAK 315



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 622 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 677

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 678 LLKKKPSLDDLKELVPDVGRSMQQLLDYPEDDVEETFCLNF 718



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   +K  GVDM   +  +  + + +   +   V+  
Sbjct: 287 IDGTFSSSGCLNGSFLAVSNDDHYKTGAKFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 344

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L  + PD EALR +LTLP      +P     + +PF  AL
Sbjct: 345 --ASLEKNLIPKLTGSLPDVEALRFYLTLPECPLMNDPNNFITIAIPFGRAL 394


>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Callithrix jacchus]
          Length = 1050

 Score =  175 bits (443), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 191/386 (49%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q            
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV----------- 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 143 -SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT +  L 
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    +TA  D    H    +VK+I+SGGD 
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLTARADRFKYH----IVKQIFSGGDQ 373

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +K  +   + DFR +N A     +N E +    +++ +  +  T++      +  
Sbjct: 374 TFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAMWRQKLSEHNNANTING-----VVQ 428

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 149/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQVCPKYFMKLVNLYKGAVLYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++ + DI+ DY  W   +     
Sbjct: 603  KV-----------------------KHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKA 639

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 700  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 792



 Score =  113 bits (283), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 131/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   ++    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEK 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 823 GLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 857



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLM----SSQHSMILEQILN 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
          Length = 928

 Score =  175 bits (443), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 193/411 (46%), Gaps = 72/411 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL+ ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D + Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCQKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  +ACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIA--SPVAMTAGEDSLVSHSGGLVVKKIY 283
           R+Y+FG+G   QL +   S  K+P  + G W +         G +          VK+I+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIGSEDY------FCVKRIF 368

Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLL 343
           SGGD S    +   +    DDFR  +P+ QI  VN                 E L Q  L
Sbjct: 369 SGGDQSFSHYSSPQNCGPPDDFRCSDPSKQIWTVN-----------------EALIQKWL 411

Query: 344 LY------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
            Y            ++  F S GC+NGSFL + ND+H+   + +FS + ++
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAISNDDHYRTGT-RFSGVDMN 461



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 133/249 (53%), Gaps = 58/249 (23%)

Query: 899  GRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDF---LCNYPFIFDAKAKTTLLE 955
            G+ + Y  FY+ ++  + DIR DY  W+  +  G   D    +C YPF+FDA+AKTTLL+
Sbjct: 487  GQLIQYDKFYIHEVQELIDIRNDYINWVQQQAYGVLADIPVTICTYPFVFDAQAKTTLLQ 546

Query: 956  MDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFK 1013
             D  +QM+ A++Q +       F P   ++N  L + V R+NIV D +  L +    D+K
Sbjct: 547  TDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYK 606

Query: 1014 KPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIW 1073
            KPLKV             F GE+A DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IW
Sbjct: 607  KPLKV------------IFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIW 654

Query: 1074 FSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLC 1133
            FS+ TFED +++ L                                         IG +C
Sbjct: 655  FSDKTFEDSDLFHL-----------------------------------------IGVIC 673

Query: 1134 GLAIYNYTV 1142
            GLAIYN+T+
Sbjct: 674  GLAIYNFTI 682



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 639 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 694

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L     L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 695 LLKRKPSLDDLKELMPAVGRSMQQLLDYPEDDIEETFCLNF 735



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 130/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVACGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL+ +++  + +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLQGSEECIR-VPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 24/35 (68%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDM 452
           ++  F S GC+NGSFL + ND+H+   ++  GVDM
Sbjct: 426 IDGTFSSSGCLNGSFLAISNDDHYRTGTRFSGVDM 460


>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
          Length = 853

 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 194/396 (48%), Gaps = 42/396 (10%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIPFMQIAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQDSHTT-----------ITS 167
           G +H  VLT SG +    + N  G    +D +     NL++   T              +
Sbjct: 198 GGAHSFVLTLSGAIFGWGR-NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAA 256

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  R
Sbjct: 257 LTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGR 315

Query: 228 LYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           +Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SGG
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPDFDS----EEYFCVKRIFSGG 371

Query: 287 DHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYL 346
           D S    +   +    DDFR  +P+ QI  VN   +++           E  ++     +
Sbjct: 372 DQSFSHYSNPQNCGPPDDFRYPDPSKQIWTVNEALIQKWLSYPSGRFPVEIANE-----I 426

Query: 347 ETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
           +  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 427 DGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 168/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N ++                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKS----------------------GQIIQYDKFYIHEVQELIDIRNDYIIWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 798  ------------------------------IGVICGLAIYNFTI 811



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++  + +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEECIR-VPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         PQ ++SL+ +P   IA G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/80 (52%), Positives = 59/80 (73%), Gaps = 4/80 (5%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAK 792
           +L +   L+DLK+L P + +
Sbjct: 824 LLKKKPSLEDLKELVPDVGR 843



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQIAQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Nomascus leucogenys]
          Length = 979

 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 190/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLVGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRCPDPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/278 (33%), Positives = 146/278 (52%), Gaps = 47/278 (16%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ ++ LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVRLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSE 1076
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSD 786



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SLV +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|28502921|gb|AAH47157.1| Herc4 protein, partial [Mus musculus]
          Length = 508

 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 168/336 (50%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 2    VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 61

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 62   VNEKT----------------------GQLIQYDKFYIHEVQELIDIRNDYINWVQQQAY 99

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 100  GVLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 159

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 160  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 207

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 208  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 248

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 249  ----------------------IGVICGLAIYNFTI 262



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 219 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 274

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L     L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 275 LLKRKPSLDDLKELMPAVGRSMQQLLDYPEDDIEETFCLNF 315


>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
          Length = 1050

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/390 (31%), Positives = 194/390 (49%), Gaps = 45/390 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+D G++F+WG  + GQLGL + +  + ++P+ +K L   +++Q         
Sbjct: 92  GESHSLALSDQGQLFSWGAGSDGQLGLTTIED-AVTVPRLIKKLNQQTILQV-------- 142

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
               + G WH LAL   G+ FTWG +++GQLGL   +  SQ+ P+RVK L  + + Q  A
Sbjct: 143 ----SCGNWHCLALAADGQFFTWGQNSYGQLGL-GKECPSQASPQRVKSLDGIPLAQVAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDP-------------SQGVQSNLVQDSHTTI 165
           G +H   L+ SG V    K N  G    SD              SQ V      + HT +
Sbjct: 198 GGAHSFALSLSGAVFGWGK-NSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAV 256

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             L   G ++T+G    GQ+G ++ N  V  P+RV  L+   ++ IACG +H+     S 
Sbjct: 257 --LTKSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVSQIACGRHHTLAFVPSS 313

Query: 226 SRLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYS 284
             +YAFG G+  QL +  + + K P  + G W A    ++   D+   H    +VK I+S
Sbjct: 314 GMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKYH----IVKHIFS 369

Query: 285 GGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLL 344
           GGD + V  +K  + + +DDFR +N       +N E +    +++ +  S  + +     
Sbjct: 370 GGDQTFVLFSKYENSLPADDFRTINETRYTSLINDETIDVWRQKLLEKNSSNSFNN---- 425

Query: 345 YLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
            +  +  S  C NGSFL+ + DEHF  + K
Sbjct: 426 -VVQILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 110/338 (32%), Positives = 162/338 (47%), Gaps = 89/338 (26%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +S  YF RL+ ++K  ++YLL     +      + F+  ++  L++L+KL+ +N 
Sbjct: 546  NWWSQVSPRYFLRLVDLYKGAVVYLLSGRKTLLIP---VLFSSYITAALKLLEKLHKVNQ 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++++ DI+ DY  W   +     
Sbjct: 603  KV-----------------------KHVEYDKFYIPEISSLVDIQEDYLMWFLHQAGMKV 639

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIMQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 700  PFLVLHVRRSNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMF 1104
            +EF +LLLKE+L+P YGMF  Y E+  +WFS+  F + N                     
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYPESNLLWFSDTCFVEHN--------------------- 786

Query: 1105 KEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                     WF            LIG +CGLAIYN+TV
Sbjct: 787  ---------WFH-----------LIGIVCGLAIYNFTV 804



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 131/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG +    K    P+++  LA   +V    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHDCEGSK----PEQIGALAGQHIVHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  + ++P+ +K L   +++Q   G  
Sbjct: 96  -------SLALSDQGQLFSWGAGSDGQLGLTTIED-AVTVPRLIKKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N YGQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGQNSYGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV+SL  +P+A +A G  HSF LS S   ++ +G  S+ QL  S + 
Sbjct: 170 GLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLS-GAVFGWGKNSSGQLGLSDER 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGV 263



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 66/95 (69%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y E+  +WFS+  F + N   LIG +CGLAIYN+T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYPESNLLWFSDTCFVEHNWFHLIGIVCGLAIYNFTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT    LQ +LDY   D+E+ F + F
Sbjct: 823 CLEDLKELSPTEGSFLQQLLDYAGEDVEETFCLNF 857



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++ +  + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLM----SSQHSILLDQILK 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +  F + + +  L +P A A+
Sbjct: 485 SFESFLIPQLSSSPPDVEAMRIYLILPEFPPFQDSKYYITLTLPLAMAI 533


>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Pan paniscus]
          Length = 979

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 190/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRCPDPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  153 bits (386), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 146/278 (52%), Gaps = 47/278 (16%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +                       G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKM----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSE 1076
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSD 786



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLVGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|355694498|gb|AER99689.1| hect domain and RLD 4 [Mustela putorius furo]
          Length = 812

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 168/336 (50%), Gaps = 80/336 (23%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 307  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNNFLHTALKVLEILHR 366

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N ++                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 367  VNEKS----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 404

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 405  GMLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 464

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 465  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 512

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                   
Sbjct: 513  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL------------------- 553

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                  IG +CGLAIYN+T+
Sbjct: 554  ----------------------IGVICGLAIYNFTI 567



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 106/218 (48%), Gaps = 17/218 (7%)

Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
           + HT   +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+ 
Sbjct: 15  EDHTA--ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTS 71

Query: 220 VLSKSVSRLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLV 278
               S  R+Y+FG+G   QL +   S  K+P  + G W           DS         
Sbjct: 72  AFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPDTDS----EEYFC 127

Query: 279 VKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDET- 337
           VK+I+SGGD S    +   +    DDFR  +P+ QI  VN       E  +++  S  + 
Sbjct: 128 VKRIFSGGDQSFSHYSNRQNCGPPDDFRCPDPSKQIWTVN-------EALIQKWLSYPSG 180

Query: 338 -LDQDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
            L  ++   ++  F S GC+NGSFL V ND+H+   +K
Sbjct: 181 RLPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTK 218



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 524 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 579

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 580 LLKKKPSLDDLKELVPDVGRSMQQLLDYPEDDVEETFCLNF 620



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   +K  GVDM   +  +  + + +   +   V+  
Sbjct: 190 IDGTFSSSGCLNGSFLAVSNDDHYRTGTKFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 247

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 248 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 297


>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Felis catus]
          Length = 621

 Score =  174 bits (441), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 131/408 (32%), Positives = 195/408 (47%), Gaps = 66/408 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  +++  + +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIR-VPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDPSQGVQSNLVQDSHTT-----------ITS 167
           G +H  VLT SG +    + N  G    +D +     NL++   T              +
Sbjct: 198 GGAHSFVLTLSGAIFGWGR-NKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAA 256

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  R
Sbjct: 257 LTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGR 315

Query: 228 LYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           +Y+FG+G   QL +   S  K+P  + G W   P       D  +       VK+I+SGG
Sbjct: 316 IYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF--PYNGQCPPD--IDSEEYFCVKRIFSGG 371

Query: 287 DHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY- 345
           D S    +   +    DDFR  +P+ QI  VN                 E L Q  L Y 
Sbjct: 372 DQSFSHYSNPQNCGPPDDFRCPDPSKQIWTVN-----------------EALIQKWLSYP 414

Query: 346 -----------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                      ++  F S GC+NGSFL V ND+H+   + KFS + ++
Sbjct: 415 SGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-KFSGVDMN 461



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++  + +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEECIR-VPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +                                       E++ WG N+Y
Sbjct: 145 GYYHSLALSKAS--------------------------------------EVFCWGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 100/239 (41%), Gaps = 57/239 (23%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           +  WG  + GQLGL   D++    P++     +  V                 GL H++ 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDV------------GCGLRHTVF 48

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H L       
Sbjct: 49  VLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAHTL------- 97

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                                          +LN  G++Y WG +  GQ+G+  S   + 
Sbjct: 98  -------------------------------ALNDKGQVYAWGLDSDGQLGLLGSEECIR 126

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK--TPQLI 252
            P+ ++SL ++ I  +ACG  HS  LSK+ S ++ +G     QL       K  +PQLI
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKA-SEVFCWGQNKYGQLGLGIDCKKQASPQLI 184



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   +K  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTKFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
          Length = 1031

 Score =  174 bits (441), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 197/402 (49%), Gaps = 52/402 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+VF+WG   HGQ+GL  A+   + +P+ +K L  + +VQ   G+ H  
Sbjct: 76  GEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIR-VPRNIKSLYDIQIVQVACGHHH-- 132

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     SLAL+   ++++WG + +GQLGL S  KK +S P+ +K LA +      A
Sbjct: 133 ----------SLALSKESDIYSWGQNQYGQLGLGSEIKK-ESAPRHIKSLAGIPFAHIAA 181

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----------SDP-------SQGVQSNLVQDSHTTI 165
           G  H   LT SG +    + N  G          S P       SQ +      + HT  
Sbjct: 182 GGGHSFALTMSGAIFGWGR-NKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTA- 239

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L   G ++T+G   YGQ+G N++N  V  P++V  L+   +  IACG  H+     S 
Sbjct: 240 -ALTKEGGVFTFGAGGYGQLGHNSTNHEVN-PRKVFELMGSIVTQIACGRQHTLAFVPSS 297

Query: 226 SRLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYS 284
            R+Y+FG+G   QL +   S  K+P  + G W+     +      L   +G   VK+IYS
Sbjct: 298 GRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWLTHEDYV----QRLPEANGCYCVKRIYS 353

Query: 285 GGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKE---CEREVEQLKSDETLDQD 341
           GGD S          +  DDF   N + +I  ++ +R++    C        S   L  +
Sbjct: 354 GGDQSFAHYFTIQHCLPPDDFTKCNCSKKIWTLDEKRIQRWLNC--------SPGRLPPE 405

Query: 342 LLLYLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLSL 383
           ++  ++ VF S  C+NGSFL   N++H+  +S KFS + +++
Sbjct: 406 IVNEIDKVFSSAACLNGSFLATSNNDHYRTSS-KFSGVDMNV 446



 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/296 (34%), Positives = 158/296 (53%), Gaps = 49/296 (16%)

Query: 804  DLEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSF-- 861
            +LE V      NW+ L+    + R++ ++K  +++LL+      S NG     ++L +  
Sbjct: 517  NLEKVPLKVLENWWALLEPPLYMRIVQLYKDVVVHLLKL-----SKNGIPLAEQRLFYIF 571

Query: 862  ---CLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDI 918
                L+VL+ L+ +N +                        + + Y  FY+ ++    DI
Sbjct: 572  INTALRVLEILHRVNEK----------------------AAQIIPYDKFYIHEVQDFVDI 609

Query: 919  RIDYFRWISGRPNGSTRDFL---CNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFL 975
            + DY  WI  + +G   D L   C YPF+FDA+AKTTLL+ D  IQM  A++  +     
Sbjct: 610  QNDYINWIQQQASGMMADPLVTICTYPFVFDAQAKTTLLQTDAAIQMRVAVDNAHRQNIS 669

Query: 976  QTFNP--HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFR 1033
              F P   +++  L + V RDNIV D +  L +    D+KKP++V             F 
Sbjct: 670  SWFLPVVESVDPCLMLIVRRDNIVGDAMEVLRKTKNIDYKKPMRV------------IFV 717

Query: 1034 GEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            GEEA DAGGVR+EF +L+++E+LDPKYGMF+ YEE+R IWFS+ TFED +++ LIG
Sbjct: 718  GEEAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEESRLIWFSDQTFEDSDLFHLIG 773



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 126/278 (45%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++ + D G V+T G +  GQLG + + KK    P +V  L + ++V    G +H  
Sbjct: 26  GSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRKK----PDQVGALDAQTIVAVSCGEAH-- 79

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+VF+WG   HGQ+GL  A+   + +P+ +K L  + +VQ   
Sbjct: 80  ----------TLALNDKGQVFSWGHAAHGQIGLSVAEDYIR-VPRNIKSLYDIQIVQVAC 128

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G+ H L L+                                         ++Y+WG N+Y
Sbjct: 129 GHHHSLALSKE--------------------------------------SDIYSWGQNQY 150

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+ +     + P+ ++SL  +P A IA G  HSF L+ S   ++ +G     QL  +
Sbjct: 151 GQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMS-GAIFGWGRNKFGQLGLN 209

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        + +  GED  + ++  GG+
Sbjct: 210 DETDRSAPALLKSLRSQKIIHICCGEDHTAALTKEGGV 247



 Score = 93.6 bits (231), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 72/101 (71%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YEE+R IWFS+ TFED ++  LIG +CGLAIYN+TII + FPLALYKK
Sbjct: 742 PKYGMFRY----YEESRLIWFSDQTFEDSDLFHLIGVVCGLAIYNFTIIELHFPLALYKK 797

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L+D K+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 798 LLKKKPTLEDFKELMPVVGRSMQQLLDYTEDDIEETFCLYF 838



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 12/115 (10%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTI---ARIERESVRSLV 474
           ++ VF S  C+NGSFL   N++H+  +SK  GVDM + +     +    +I ++   SL 
Sbjct: 410 IDKVFSSAACLNGSFLATSNNDHYRTSSKFSGVDMNVARLLLHKLMDSPQIVQQVAASLE 469

Query: 475 SNLAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
            N         L+  L ++PPD E LR++LTLP             L +PFA A+
Sbjct: 470 RN---------LIPRLTSSPPDIECLRLYLTLPECPPMTETNNFPSLAIPFATAI 515


>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
           boliviensis boliviensis]
          Length = 1050

 Score =  174 bits (441), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 191/386 (49%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q            
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV----------- 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 143 -SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT +  L 
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    +TA  D    H    +VK+I+SGGD 
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLTARADRFKYH----IVKQIFSGGDQ 373

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +K  +   + DFR +N A     +N E +    +++ +  +  T++      +  
Sbjct: 374 TFVLCSKYENSSPAVDFRTVNQAHYTSLINDETIAVWRQKLSEHNNANTING-----VVQ 428

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 149/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQVCPKYFMKLVNLYKGAVLYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++ + DI+ DY  W   +     
Sbjct: 603  KV-----------------------KHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKA 639

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 700  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 792



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 131/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   ++    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEK 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 823 GLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 857



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLM----SSQHSMILEQILN 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
          Length = 1057

 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 192/411 (46%), Gaps = 72/411 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL+ ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D + Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCQKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +   ACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQAACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIA--SPVAMTAGEDSLVSHSGGLVVKKIY 283
           R+Y+FG+G   QL +   S  K+P  + G W +         G +          VK+I+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIGSEDY------FCVKRIF 368

Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLL 343
           SGGD S    +   +    DDFR  +P+ QI  VN                 E L Q  L
Sbjct: 369 SGGDQSFSHYSSPQNCGPPDDFRCSDPSKQIWTVN-----------------EALIQKWL 411

Query: 344 LY------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
            Y            ++  F S GC+NGSFL + ND+H+   + +FS + ++
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAISNDDHYRTGT-RFSGVDMN 461



 Score =  169 bits (429), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 167/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQLIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G                +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GVDVSHGVTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 798  ------------------------------IGVICGLAIYNFTI 811



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 129/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVACGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL+ +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLQGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score =  110 bits (276), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L     L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKRKPSLDDLKELMPAVGRSMQQLLDYPEDDIEETFCLNF 864



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL + ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAISNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDCNNFTTIAIPFGTAL 533


>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
 gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
          Length = 1057

 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 127/411 (30%), Positives = 192/411 (46%), Gaps = 72/411 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL+ ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   + + Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIECQKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIA--SPVAMTAGEDSLVSHSGGLVVKKIY 283
           R+Y+FG+G   QL +   S  K+P  + G W +         G +          VK+I+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIGSEDY------FCVKRIF 368

Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLL 343
           SGGD S    +        DDFR  +P+ QI  VN                 E L Q  L
Sbjct: 369 SGGDQSFSHYSSPQSCGPPDDFRRSDPSKQIWTVN-----------------EALIQKWL 411

Query: 344 LY------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
            Y            ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  169 bits (429), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 166/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N  T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNERT----------------------GQLIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G                +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GVDVSHGITELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 798  ------------------------------IGVICGLAIYNFTI 811



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 129/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL+ +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLQGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L     L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKRKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 864



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHRLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDCNNFTTIAIPFGTAL 533


>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pongo abelii]
          Length = 1057

 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 189/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSE-ECIRVPRNIKSLSDIQIVQVACGYC--- 147

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 148 ---------HSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRCPDPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 168/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 798  ------------------------------IGVICGLAIYNFTI 811



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLVGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYCHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 864



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
           familiaris]
          Length = 1050

 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 191/386 (49%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q            
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV----------- 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 143 -SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEYPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT +  L 
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    ++A  D    H    +VK+I+SGGD 
Sbjct: 318 AFGCGAKGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSGGDQ 373

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +K  +   + DFR +N A     +N E +    +++ +  +  T++      +  
Sbjct: 374 TFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNANTMNG-----VVQ 428

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 98/285 (34%), Positives = 150/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQVCPKYFMKLVNLYKGAVVYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++ + DI+ DY  W   +    T
Sbjct: 603  KV-----------------------KHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKT 639

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 700  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 792



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 131/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   +V    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEE 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 823 GLEDLKELSPTEGRSLQELLDYPGEDIEETFCLNF 857



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLM----SSQHSMILEQILN 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|119574645|gb|EAW54260.1| hect domain and RLD 4, isoform CRA_a [Homo sapiens]
          Length = 794

 Score =  173 bits (439), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/283 (34%), Positives = 156/283 (55%), Gaps = 39/283 (13%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 288  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 347

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +                       G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 348  VNEKM----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 385

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   ++N  
Sbjct: 386  GMLADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPC 445

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+E
Sbjct: 446  LILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKE 493

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            F +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ LIG
Sbjct: 494  FFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHLIG 536



 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 96/216 (44%), Gaps = 35/216 (16%)

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  R+Y+F
Sbjct: 6   GGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSF 64

Query: 232 GIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSI 290
           G+G   QL +   S  K+P  + G W           DS         VK+I+SGGD S 
Sbjct: 65  GLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDS----EEYFCVKRIFSGGDQSF 120

Query: 291 VTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY----- 345
              +   +    DDFR  NP  QI  VN                 E L Q  L Y     
Sbjct: 121 SHYSSPQNCGPPDDFRCPNPTKQIWTVN-----------------EALIQKWLSYPSGRF 163

Query: 346 -------LETVFLSPGCMNGSFLQVENDEHFSCNSK 374
                  ++  F S GC+NGSFL V ND+H+   ++
Sbjct: 164 PVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTR 199



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN TI+++ FPLALYKK
Sbjct: 505 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNCTIVDLHFPLALYKK 560

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 561 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 601



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 171 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 228

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 229 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 278


>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Meleagris gallopavo]
          Length = 1050

 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 125/390 (32%), Positives = 194/390 (49%), Gaps = 45/390 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL+D G+VF+WG  + GQLGL + +  + ++P+ +K L   +++Q         
Sbjct: 92  GESHSVALSDQGQVFSWGAGSDGQLGLTTIED-AVTVPRLIKKLNQQTILQI-------- 142

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
               + G WH LAL   G+ FTWG +++GQLGL   +  SQ+ P+RVK L  + + Q  A
Sbjct: 143 ----SCGNWHCLALAADGQFFTWGQNSYGQLGL-GKECPSQASPQRVKSLDGIPLAQVAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDP-------------SQGVQSNLVQDSHTTI 165
           G +H   L+ SG V    K N  G    SD              SQ V      + HT +
Sbjct: 198 GGAHSFALSLSGAVFGWGK-NSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAV 256

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             L   G ++T+G    GQ+G ++ N  V  P+RV  L+   ++ IACG +H+     S 
Sbjct: 257 --LTKSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVSQIACGRHHTLAFVPSS 313

Query: 226 SRLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYS 284
             +YAFG G+  QL +  + + K P  + G W A    ++   D+   H    +VK I+S
Sbjct: 314 GMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKYH----IVKHIFS 369

Query: 285 GGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLL 344
           GGD + V  +K  + + +DDFR +N       +N E +     +V + K  E    + + 
Sbjct: 370 GGDQTFVLCSKYENSLPADDFRTINETRYTCLINDETI-----DVWRQKLLEKNSSNSVN 424

Query: 345 YLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
            +  +  S  C NGSFL+ + DEHF  + K
Sbjct: 425 NVVQILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 161/338 (47%), Gaps = 89/338 (26%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF RL+ ++K  ++YLL     +      + F+  ++  L++L+KL+ +N 
Sbjct: 546  NWWSQVCPRYFLRLVDLYKGAVVYLLSGRKTLLIP---VLFSSYITAALRLLEKLHKVNQ 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + + Y  FY+P+++++ DI+ DY  W   +     
Sbjct: 603  KV-----------------------KHIEYDKFYIPEISSLVDIQEDYLMWFLHQAGMKV 639

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIMQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 700  PFLVLHVRRSNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMF 1104
            +EF +LLLKE+L+P YGMF  Y E+  +WFS+  F + N                     
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYPESNLLWFSDTCFVEHN--------------------- 786

Query: 1105 KEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                     WF            LIG +CGLAIYN+TV
Sbjct: 787  ---------WFH-----------LIGIICGLAIYNFTV 804



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 131/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG ES   K    P+ +  LA   +V    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHESEGSK----PELIGALAGQHIVHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  S+AL+D G+VF+WG  + GQLGL + +  + ++P+ +K L   +++Q   G  
Sbjct: 96  -------SVALSDQGQVFSWGAGSDGQLGLTTIED-AVTVPRLIKKLNQQTILQISCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N YGQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGQNSYGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV+SL  +P+A +A G  HSF LS S   ++ +G  S+ QL  S + 
Sbjct: 170 GLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLS-GAVFGWGKNSSGQLGLSDER 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGV 263



 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 48/95 (50%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y E+  +WFS+  F + N   LIG +CGLAIYN+T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYPESNLLWFSDTCFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ +LDY   D+E+ F + F
Sbjct: 823 CLEDLKELSPTEGRSLQQLLDYPGEDIEETFCLNF 857



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++ +  + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSILLDQILK 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +  F + + +  L +P A A+
Sbjct: 485 SFESFLIPQLSSSPPDVEAMRIYLILPEFPPFQDSKYYITLTLPLAMAI 533



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 88/222 (39%), Gaps = 34/222 (15%)

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHCLVLTSSGVVTCTH 140
           +  WG  + GQ G+ S  +     P+    +   +V + AC G     +L    V TC  
Sbjct: 1   MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 141 KENGCGSDPSQGVQSNLV-------------QDSHTTITSLNSPGELYTWGNNEYGQMGI 187
              G     S+G +  L+              +SH+   +L+  G++++WG    GQ+G+
Sbjct: 61  NTKGQLGHESEGSKPELIGALAGQHIVHVACGESHS--VALSDQGQVFSWGAGSDGQLGL 118

Query: 188 NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK 247
                 VT P+ ++ L    I  I+CG  H   L+    + + +G  S  QL   K    
Sbjct: 119 TTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAAD-GQFFTWGQNSYGQLGLGKEC-- 175

Query: 248 TPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHS 289
                  P  ASP          V    G+ + ++ +GG HS
Sbjct: 176 -------PSQASP--------QRVKSLDGIPLAQVAAGGAHS 202


>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Papio anubis]
          Length = 1050

 Score =  173 bits (438), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 191/386 (49%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q            
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV----------- 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 143 -SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT +  L 
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    ++A  D    H    +VK+I+SGGD 
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSGGDQ 373

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +K  +   + DFR +N A     +N E +    +++ +  +  T++      +  
Sbjct: 374 TFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNANTING-----VVQ 428

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 150/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQVCPKYFMKLVNLYKGAVLYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++++ DI+ DY  W   +     
Sbjct: 603  KV-----------------------KHVEYDTFYIPEISSLVDIQEDYLMWFLHQAGMKA 639

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 700  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 792



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 131/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   ++    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEK 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 823 GLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 857



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSMILEQILN 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
          Length = 1050

 Score =  173 bits (438), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 191/386 (49%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q            
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV----------- 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 143 -SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT +  L 
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    ++A  D    H    +VK+I+SGGD 
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSGGDQ 373

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +K  +   + DFR +N A     +N E +    +++ +  +  T++      +  
Sbjct: 374 TFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNANTING-----VVQ 428

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 149/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQVCPKYFMKLVNLYKGAVVYLLRGRKTFLIP---VLFNNYVTAALKLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++ + DI+ DY  W   +     
Sbjct: 603  KV-----------------------KHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKA 639

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 700  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 792



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 131/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   +V    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEE 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 823 GLEDLKELSPTEGRSLQELLDYPGEDIEETFCLNF 857



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLM----SSQHSMILEQILN 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
 gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
          Length = 1050

 Score =  173 bits (438), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 191/386 (49%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q            
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV----------- 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 143 -SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT +  L 
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    ++A  D    H    +VK+I+SGGD 
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSGGDQ 373

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +K  +   + DFR +N A     +N E +    +++ +  +  T++      +  
Sbjct: 374 TFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNANTING-----VVQ 428

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 150/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQVCPKYFMKLVNLYKGAVLYLLRGRKTFLIP---VLFNNYVTAALKLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++++ DI+ DY  W   +     
Sbjct: 603  KV-----------------------KHVEYDTFYIPEISSLVDIQEDYLMWFLHQAGMKA 639

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 700  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 792



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 131/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   ++    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEK 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 823 GLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 857



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSMILEQILN 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Nomascus leucogenys]
          Length = 1050

 Score =  173 bits (438), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 191/386 (49%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q            
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV----------- 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 143 -SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT +  L 
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    ++A  D    H    +VK+I+SGGD 
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSGGDQ 373

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +K  +   + DFR +N A     +N E +    +++ +  +  T++      +  
Sbjct: 374 TFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHSNANTING-----VVQ 428

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 149/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQVCPKYFMKLVNLYKGAVLYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++ + DI+ DY  W   +     
Sbjct: 603  KV-----------------------KHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKA 639

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 700  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 792



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 131/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   ++    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEK 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 823 GLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 857



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSMILEQILN 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
           carolinensis]
          Length = 1109

 Score =  173 bits (438), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 192/392 (48%), Gaps = 55/392 (14%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G +F+WG  + GQLGL + +  S ++P+ +K L            +  ++L 
Sbjct: 154 HSLALSDQGRLFSWGAGSDGQLGLTTTED-SVAVPRLIKKL------------NQEMILQ 200

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH LAL   G+ F WG ++HGQLGL   +  SQ+ P+RVK L  + + Q  AG +
Sbjct: 201 VSCGNWHCLALAADGQFFAWGQNSHGQLGL-GKEFPSQASPQRVKSLDGIPLAQVAAGGA 259

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQD----------------------SHT 163
           H   L+ SG V       G G + S  +  +  QD                       HT
Sbjct: 260 HSFALSLSGAVF------GWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHT 313

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            +  L   G ++T+G    GQ+G ++ N  V  P+RV  L+   ++ IACG  H+     
Sbjct: 314 AV--LTKTGGVFTFGAGSCGQLGHDSFNDEVN-PRRVLELMGSEVSQIACGRQHTLAFVP 370

Query: 224 SVSRLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKI 282
           S   +YAFG G   QL S  + + K P  + G W A    ++   D+   +    VVK I
Sbjct: 371 SSGLIYAFGCGIKGQLGSGHTCNLKCPSPVKGHWAAHNEPVSRRADACKHY----VVKHI 426

Query: 283 YSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDL 342
           +SGGD + V  ++  +   +DDFR +N +  I  +N + +    +++ + K+  ++++  
Sbjct: 427 FSGGDQTFVLCSERENSPPADDFRTINQSAYICSINDDTIDTWRQKLSEKKNPNSVNE-- 484

Query: 343 LLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
              +  +  S  C NGSFL+ + DEHF  + K
Sbjct: 485 ---VVQILSSAACWNGSFLEKKIDEHFKTSPK 513



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 162/344 (47%), Gaps = 101/344 (29%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDIT------FNRKLSFCLQVLQK 868
            NW+  +   YF RL+ ++K  ++YLL         NG  T      ++  ++  L++L+K
Sbjct: 605  NWWSQICPGYFLRLVDLYKGAVVYLL---------NGRKTLLIPVLYSSYITAALKLLEK 655

Query: 869  LNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISG 928
            L+ +N +                        R V Y  FY+P+++++ DI+ DY  W   
Sbjct: 656  LHKVNQK-----------------------ARHVEYDKFYIPEISSLVDIQEDYLMWFLH 692

Query: 929  RPNGSTRD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFN 979
            +     R         LC+YPFIFDA+AKT +L+ D  +QM+ A++  N      L T  
Sbjct: 693  QAGMKVRPPIMQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAISGANLQNVFMLLTLE 752

Query: 980  PH-TLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
            P    + +L + V R N+V D +REL+ ++  D KKPLKV             F GEEA 
Sbjct: 753  PLLARSPFLVLHVRRSNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAV 800

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGV +EF +LLLKE+L+P YGMF  Y E+  +WFS+  F + N               
Sbjct: 801  DAGGVTKEFFLLLLKELLNPIYGMFTFYSESNLLWFSDTCFVEHN--------------- 845

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                           WF            LIG +CGLAIYN+TV
Sbjct: 846  ---------------WFH-----------LIGIICGLAIYNFTV 863



 Score =  109 bits (273), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 109/234 (46%), Gaps = 56/234 (23%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K  S P+++  LA   ++    G SH     
Sbjct: 104 HSIFLLEDGEVYTCGVNTKGQLGHE----KEGSKPEQIGALADQHIIHVACGESH----- 154

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G +F+WG  + GQLGL + +  S ++P+ +K L    ++Q   G  
Sbjct: 155 -------SLALSDQGRLFSWGAGSDGQLGLTTTED-SVAVPRLIKKLNQEMILQVSCGNW 206

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + + WG N +GQ+
Sbjct: 207 HCLALAADG--------------------------------------QFFAWGQNSHGQL 228

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           G+     +   PQRV+SL  +P+A +A G  HSF LS S   ++ +G  ++ QL
Sbjct: 229 GLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLS-GAVFGWGKNTSGQL 281



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 67/95 (70%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y E+  +WFS+  F + N   LIG +CGLAIYN+T++++ FPLALYKK+L+   
Sbjct: 822 YGMFTFYSESNLLWFSDTCFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVAP 881

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP   +SLQ +LDY   D+E+ F + F
Sbjct: 882 CLEDLKELSPMEGRSLQQLLDYPGEDVEETFCLYF 916



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 4/118 (3%)

Query: 412 PKSWLYLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVR 471
           P S   +  +  S  C NGSFL+ + DEHF  + K PG+D+   +  +D +   +   + 
Sbjct: 479 PNSVNEVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLDSTRVMFDKLMTSQHAILL 538

Query: 472 SLVSNLAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
             +S     +  + L+  L ++PPD EA+R++L LP +  F + + +  L +P A A+
Sbjct: 539 DQISK----SFESFLIPQLPSSPPDVEAMRIYLILPEFPPFQDSKNYVTLTLPLAMAI 592


>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
          Length = 928

 Score =  173 bits (438), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 127/411 (30%), Positives = 192/411 (46%), Gaps = 72/411 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL+ ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   + + Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIECQKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIA--SPVAMTAGEDSLVSHSGGLVVKKIY 283
           R+Y+FG+G   QL +   S  K+P  + G W +         G +          VK+I+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIGSEDY------FCVKRIF 368

Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLL 343
           SGGD S    +        DDFR  +P+ QI  VN                 E L Q  L
Sbjct: 369 SGGDQSFSHYSSPQSCGPPDDFRRSDPSKQIWTVN-----------------EALIQKWL 411

Query: 344 LY------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
            Y            ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 133/249 (53%), Gaps = 58/249 (23%)

Query: 899  GRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDF---LCNYPFIFDAKAKTTLLE 955
            G+ + Y  FY+ ++  + DIR DY  W+  +  G   D    +C YPF+FDA+AKTTLL+
Sbjct: 487  GQLIQYDKFYIHEVQELIDIRNDYINWVQQQAYGVLADIPVTICTYPFVFDAQAKTTLLQ 546

Query: 956  MDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFK 1013
             D  +QM+ A++Q +       F P   ++N  L + V R+NIV D +  L +    D+K
Sbjct: 547  TDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYK 606

Query: 1014 KPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIW 1073
            KPLKV             F GE+A DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IW
Sbjct: 607  KPLKV------------IFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIW 654

Query: 1074 FSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLC 1133
            FS+ TFED +++ L                                         IG +C
Sbjct: 655  FSDKTFEDSDLFHL-----------------------------------------IGVIC 673

Query: 1134 GLAIYNYTV 1142
            GLAIYN+T+
Sbjct: 674  GLAIYNFTI 682



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 639 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 694

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L     L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 695 LLKRKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 735



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 130/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL+ +++  + +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLQGSEECIR-VPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 42.7 bits (99), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 17/35 (48%), Positives = 24/35 (68%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDM 452
           ++  F S GC+NGSFL V ND+H+   ++  GVDM
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDM 460


>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pongo abelii]
          Length = 979

 Score =  173 bits (438), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 189/409 (46%), Gaps = 68/409 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL  ++ +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLVGSE-ECIRVPRNIKSLSDIQIVQVACGYC--- 147

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  A
Sbjct: 148 ---------HSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +                   +  N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W           DS         VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDS----EEYFCVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S    +   +    DDFR  +P  QI  VN                 E L Q  L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRCPDPTKQIWTVN-----------------EALIQKWLSY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
                       ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/278 (33%), Positives = 147/278 (52%), Gaps = 47/278 (16%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 641  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 701  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSE 1076
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+
Sbjct: 749  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSD 786



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLVGSEE-CIRVPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +  V C                                      WG N+Y
Sbjct: 145 GYCHSLALSKASEVFC--------------------------------------WGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533


>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Takifugu
            rubripes]
          Length = 1042

 Score =  173 bits (438), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/279 (37%), Positives = 153/279 (54%), Gaps = 38/279 (13%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+       F+RL+ ++K+ ++YLL+   +   +     FN  L   L+ L+ L++++ 
Sbjct: 540  NWWSTFEGMLFQRLVELYKEVVVYLLRMHKLGIPSIEQRIFNCFLDTSLRFLKMLHAVSE 599

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGR--PNG 932
                                    G  + Y  FY+ +L  + DIR DY  W   +  P+G
Sbjct: 600  RA----------------------GHIIEYDKFYIHELDDLVDIRNDYITWFQRQMFPSG 637

Query: 933  -STRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP-HTLNQYLEVE 990
              +   LC YPF+FDA+AKTTLL+ D  +QM+ A++Q         F P  ++N  L + 
Sbjct: 638  PDSLVTLCRYPFVFDAQAKTTLLQTDAVLQMQMAVDQAQMQNLSSLFMPVESVNPCLILI 697

Query: 991  VSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLML 1050
            V RDNIV DT+  L +    D+KKPLKV             F GEEA DAGGVR+EF +L
Sbjct: 698  VRRDNIVGDTMEVLRKSKNVDYKKPLKV------------IFVGEEAVDAGGVRKEFFLL 745

Query: 1051 LLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            ++KE++DPKYGMF+ YEE+R IWFS  TFE+ +++ LIG
Sbjct: 746  IMKELMDPKYGMFRYYEESRLIWFSNKTFEEFDLFNLIG 784



 Score =  151 bits (382), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 193/401 (48%), Gaps = 56/401 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G++F+WG  + GQLGL + ++  + +P+ +K L+ V + Q   GY H  
Sbjct: 92  GESHTLALNDKGQIFSWGLGSDGQLGLNNFEECVR-VPRNIKCLSDVQIAQVACGYRH-- 148

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S AL+  G+VF+WG +  GQLGL      S S P+ ++ L  +   Q  A
Sbjct: 149 ----------SHALSKGGQVFSWGQNQFGQLGL-GMHGSSISTPQIIQSLQGIPFAQLSA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG-----------------SDPSQGVQSNLVQDSHTTI 165
           G +H   +T SG V    + N  G                 S  SQ V      + HT  
Sbjct: 198 GGAHSFAITLSGAVFGWGR-NKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTA- 255

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L   G ++T+G   YGQ+G N++N  +  P++V  L+   +  I+CG  H+   + S 
Sbjct: 256 -ALTKEGGVFTFGAGGYGQLGHNSTNHEIN-PRKVFELMGNIVTQISCGRQHTLAFTPSS 313

Query: 226 SRLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYS 284
            ++Y+FG+G   QL +  + + K+P  + GP++AS   + +  +          + +IY+
Sbjct: 314 GKMYSFGLGGNGQLGTRSTCNRKSPAPVKGPFVASAAPIESESEQC------FCIHRIYA 367

Query: 285 GGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDET--LDQDL 342
           GGD S       +       F + +    I  +N       E  +E+  S  T  L  ++
Sbjct: 368 GGDQSFAHYYSPN----VSPFSIWSTNRGICTLN-------EDIIEKWLSHSTGRLSLEI 416

Query: 343 LLYLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLSL 383
              ++ VF S  C+NGSFL   N +HF+ +S KFS + +++
Sbjct: 417 SSEIDLVFSSASCLNGSFLATSNPDHFNTSS-KFSGVDMNM 456



 Score =  103 bits (257), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 112/232 (48%), Gaps = 58/232 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ L D G V+T G +  GQLG E   KK    P+ V  L +  +V    G SH  
Sbjct: 42  GLKHTVFLLDDGTVYTCGCNDLGQLGHEKPRKK----PEHVVALDAQIIVAVSGGESH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G++F+WG  + GQLGL + ++  + +P+ +K L+ V + Q   
Sbjct: 96  ----------TLALNDKGQIFSWGLGSDGQLGLNNFEECVR-VPRNIKCLSDVQIAQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H                                  SH    +L+  G++++WG N++
Sbjct: 145 GYRH----------------------------------SH----ALSKGGQVFSWGQNQF 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
           GQ+G+    ++++ PQ ++SL  +P A ++ G  HSF ++ S +    FG G
Sbjct: 167 GQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGA---VFGWG 215



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 71/101 (70%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YEE+R IWFS  TFE+ ++  LIG +CGLAIYN TI+ + FP+ALYKK
Sbjct: 753 PKYGMFRY----YEESRLIWFSNKTFEEFDLFNLIGIICGLAIYNLTIVELQFPVALYKK 808

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L+P + +SLQ +LDY E DLE+ F + F
Sbjct: 809 LLKKKPTLDDLKELTPDVGRSLQALLDYPEDDLEETFCLNF 849



 Score = 80.5 bits (197), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 111/273 (40%), Gaps = 72/273 (26%)

Query: 19  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALND 78
           WG  ++GQLGL   D++    P++            C  +    V     GL H++ L D
Sbjct: 4   WGNASYGQLGLGGIDEEIVIEPRK------------CEFFHGKKVCDVGCGLKHTVFLLD 51

Query: 79  CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC 138
            G V+T G +  GQLG E   KK    P+ V  L +  +V    G SH L          
Sbjct: 52  DGTVYTCGCNDLGQLGHEKPRKK----PEHVVALDAQIIVAVSGGESHTL---------- 97

Query: 139 THKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQ 198
                                       +LN  G++++WG    GQ+G+NN    V  P+
Sbjct: 98  ----------------------------ALNDKGQIFSWGLGSDGQLGLNNFEECVRVPR 129

Query: 199 RVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIA 258
            ++ L ++ IA +ACG  HS  LSK   +++++G     QL            +HG  I+
Sbjct: 130 NIKCLSDVQIAQVACGYRHSHALSKG-GQVFSWGQNQFGQLGLG---------MHGSSIS 179

Query: 259 SPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           +P         ++    G+   ++ +GG HS  
Sbjct: 180 TP--------QIIQSLQGIPFAQLSAGGAHSFA 204



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 64/112 (57%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++ VF S  C+NGSFL   N +HF+ +SK  GVDM + +  +  + + +   +  L++  
Sbjct: 420 IDLVFSSASCLNGSFLATSNPDHFNTSSKFSGVDMNMARLLFHRVIQHDHPEISQLIA-- 477

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L N+PPD E+LR++LTLP    F +   +  + +PFA ++
Sbjct: 478 --ASLEKNLLPRLTNSPPDIESLRLYLTLPECPLFSDQNNYVTITIPFAKSI 527


>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Ailuropoda melanoleuca]
          Length = 1129

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 191/386 (49%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q            
Sbjct: 174 HSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV----------- 221

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 222 -SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGA 279

Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT +  L 
Sbjct: 280 HSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 337

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 338 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 396

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    ++A  D    H    +VK+I+SGGD 
Sbjct: 397 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSGGDQ 452

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +K  +   + DFR +N A     +N E +    +++ +  +  T++      +  
Sbjct: 453 TFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNANTING-----VVQ 507

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  + K
Sbjct: 508 ILSSAACWNGSFLEKKIDEHFKTSPK 533



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 149/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 625  NWWSQVCPKYFMKLVNLYKGAVVYLLRGRKTFLIP---VLFNNYVTAALKLLEKLYKVNL 681

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++ + DI+ DY  W   +     
Sbjct: 682  KV-----------------------KHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKA 718

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 719  RPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 778

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 779  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 826

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 827  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 871



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 131/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   +V    G SH     
Sbjct: 124 HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVACGESH----- 174

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 175 -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 226

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 227 HCLALAADG--------------------------------------QFFTWGKNSHGQL 248

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 249 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEE 307

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 308 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 342



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 842 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 901

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 902 GLEDLKELSPTEGRSLQELLDYPGEDIEETFCLNF 936



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 508 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLM----SSQHSMILEQILN 563

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 564 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 612


>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
          Length = 1050

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 191/386 (49%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q            
Sbjct: 95  HSLALSDQGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQV----------- 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 143 -SCGNWHCLALAADGQFFTWGRNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVVAGGA 200

Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT +  L 
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    ++A  D    H    +VK+I+SGGD 
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSGGDQ 373

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +K  +   + DFR +N A     +N E +    +++ +  +  T++      +  
Sbjct: 374 TFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNANTING-----VVQ 428

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  140 bits (354), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/285 (34%), Positives = 150/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQVCPKYFTKLVNLYKGAVVYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y AFY+P+++++ DI+ DY  W   +     
Sbjct: 603  KV-----------------------KHVEYDAFYIPEISSLVDIQEDYLMWFLHQAGMKA 639

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIMQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 700  PFLVLHVRRSNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 792



 Score =  113 bits (283), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 130/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   +V    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGANTKGQLGHEREGNK----PEQIGALADQHIVHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDQGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGRNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV SL  +P+A +  G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEK 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 823 GLEDLKELSPTEGRSLQELLDYPGEDIEETFCLNF 857



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSMILEQILN 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
           garnettii]
          Length = 1050

 Score =  172 bits (437), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 192/386 (49%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q            
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLTTTE-DSVAVPRLIQKLNQQTILQV----------- 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 143 -SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT + + N
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKN 260

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 261 --GGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    ++A  D    H    +VK+I+SGGD 
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARPDRFKYH----IVKQIFSGGDQ 373

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +K  +   + DFR +N A     +N E +    +++ +  +  T++      +  
Sbjct: 374 TFVLCSKYENYSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNANTING-----VVQ 428

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 150/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQVCPKYFMKLVNLYKGAVLYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++++ DI+ DY  W   +     
Sbjct: 603  KV-----------------------KHVEYDTFYIPEISSLVDIQEDYLMWFLHQAGMKA 639

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIIQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 700  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 792



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 131/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   ++    G SH     
Sbjct: 45  HSVFLLEGGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLTTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEK 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ +GG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGV 263



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/95 (50%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+ED F + F
Sbjct: 823 GLEDLKELSPTEGRSLQELLDYPGEDVEDTFCLNF 857



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSMILEQILN 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
 gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
 gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
          Length = 1050

 Score =  172 bits (437), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 192/386 (49%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q            
Sbjct: 95  HSLALSDQGQLFSWGAGSDGQLGLMTIED-SVAVPRLIQKLNQQTILQV----------- 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 143 -SCGNWHCLALAADGQFFTWGRNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVVAGGA 200

Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT +  L 
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    ++A  D    H    +VK+I+SGGD 
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSGGDQ 373

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +K  +   + DFR++N A     +N E +    +++ +  +  T++      +  
Sbjct: 374 TFVLCSKYENSSPAVDFRMMNQAHYTSLINDETIAVWRQKLSEHNNANTING-----VVQ 428

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 149/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQVCPKYFTKLVNLYKGAVVYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++++ DI+ DY  W   +     
Sbjct: 603  KV-----------------------KHVEYDTFYIPEISSLVDIQEDYLMWFLHQAGMKA 639

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIMQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 700  PFLVLHVRRSNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 792



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 130/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   +V    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIGALADQHIVHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDQGQLFSWGAGSDGQLGLMTIED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGRNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV SL  +P+A +  G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEK 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 823 GLEDLKELSPTEGRSLQELLDYPGEDIEETFCLNF 857



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSMILEQILN 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
          Length = 1504

 Score =  172 bits (437), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 192/389 (49%), Gaps = 43/389 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q         
Sbjct: 546 GESHSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV-------- 596

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
               + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 597 ----SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQTSPQRVRSLEGIPLAQVAA 651

Query: 123 GYSHCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTIT 166
           G +H   L+ SG V                  +E+ C      +Q V      + HT + 
Sbjct: 652 GGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV- 710

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            L   G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S  
Sbjct: 711 -LTKSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSG 768

Query: 227 RLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
            +YAFG G+  QL +  + + K P  + G W A    ++A  D    H    +VK+I+SG
Sbjct: 769 LIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRCKYH----IVKQIFSG 824

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD + V  +K  +   + DFR +N A     +N E L    +++ +  +  T++      
Sbjct: 825 GDQTFVLCSKYENSSPAVDFRTVNQAHYTSLINDETLAVWRQKLSEHNNANTING----- 879

Query: 346 LETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  +  S  C NGSFL+ + DEHF  + K
Sbjct: 880 VVQILSSAACWNGSFLEKKIDEHFKTSPK 908



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 150/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 1000 NWWSQVCPKYFMKLVNLYKGAVLYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 1056

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++++ DI+ DY  W   +     
Sbjct: 1057 KV-----------------------KHVEYDTFYIPEISSLVDIQEDYLMWFLHQAGMKA 1093

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFY--LFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 1094 RPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 1153

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 1154 PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 1201

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 1202 KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 1246



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 133/275 (48%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   +V    G SH     
Sbjct: 499 HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVACGESH----- 549

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 550 -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 601

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 602 HCLALAADG--------------------------------------QFFTWGKNSHGQL 623

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     + T PQRV SL  +P+A +A G  HSF LS S + ++ +G+ +A QL  S + 
Sbjct: 624 GLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGA-VFGWGMNNAGQLGLSDEK 682

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 683 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 717



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720  YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
            YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 1217 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVQP 1276

Query: 779  LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
             L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 1277 GLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 1311



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 883 ILSSAACWNGSFLEKKIDEHFKTSPKVPGIDLNSTRVLFEKLM----NSQHSMILEQILN 938

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 939 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYISLTIPLAMAI 987


>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
 gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
          Length = 1050

 Score =  172 bits (437), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 125/390 (32%), Positives = 194/390 (49%), Gaps = 45/390 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL+D G+VF+WG  + GQLGL + +  + ++P+ +K L   +++Q         
Sbjct: 92  GESHSVALSDQGQVFSWGAGSDGQLGLTTIED-AVTVPRLIKKLNQQTILQI-------- 142

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
               + G WH LAL   G+ FTWG +++GQLGL   +  SQ+ P+RVK L  + + Q  A
Sbjct: 143 ----SCGNWHCLALAADGQFFTWGQNSYGQLGL-GKECPSQASPQRVKSLDGIPLAQVAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDP-------------SQGVQSNLVQDSHTTI 165
           G +H   L+ SG V    K N  G    SD              SQ V      + HT +
Sbjct: 198 GGAHSFALSLSGAVFGWGK-NSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAV 256

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             L   G ++T+G    GQ+G ++ N  V  P+RV  L+   ++ IACG +H+     S 
Sbjct: 257 --LTKSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVSQIACGRHHTLAFVPSS 313

Query: 226 SRLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYS 284
             +YAFG G+  QL +  + + K P  + G W A    ++   D+   H    +VK I+S
Sbjct: 314 GMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKYH----IVKHIFS 369

Query: 285 GGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLL 344
           GGD + V  +K  + + +DDFR +N       +N E +     +V + K  E    + + 
Sbjct: 370 GGDQTFVLCSKYENSLPADDFRTINGTRYTCLINDETI-----DVWRQKLLEKNSSNSVN 424

Query: 345 YLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
            +  +  S  C NGSFL+ + DEHF  + K
Sbjct: 425 NVVQILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 161/338 (47%), Gaps = 89/338 (26%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF RL+ ++K  ++YLL     +      + F+  ++  L++L+KL+ +N 
Sbjct: 546  NWWSQVCPRYFLRLVDLYKGAVVYLLSGRKTLLIP---VLFSSYITAALRLLEKLHKVNQ 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + + Y  FY+P+++++ DI+ DY  W   +     
Sbjct: 603  KV-----------------------KHIEYDKFYIPEISSLVDIQEDYLMWFLHQAGMKV 639

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIMQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 700  PFLVLHVRRSNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMF 1104
            +EF +LLLKE+L+P YGMF  Y E+  +WFS+  F + N                     
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYPESNLLWFSDTCFVEHN--------------------- 786

Query: 1105 KEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                     WF            LIG +CGLAIYN+TV
Sbjct: 787  ---------WFH-----------LIGIICGLAIYNFTV 804



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 131/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG ES   K    P+ +  LA   +V    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHESEGSK----PEPIGALAGQHIVHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  S+AL+D G+VF+WG  + GQLGL + +  + ++P+ +K L   +++Q   G  
Sbjct: 96  -------SVALSDQGQVFSWGAGSDGQLGLTTIED-AVTVPRLIKKLNQQTILQISCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N YGQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGQNSYGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV+SL  +P+A +A G  HSF LS S   ++ +G  S+ QL  S + 
Sbjct: 170 GLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLS-GAVFGWGKNSSGQLGLSDER 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGV 263



 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 48/95 (50%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y E+  +WFS+  F + N   LIG +CGLAIYN+T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYPESNLLWFSDTCFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ +LDY   D+E+ F + F
Sbjct: 823 CLEDLKELSPTEGRSLQQLLDYPGEDIEETFCLNF 857



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++ +  + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSILLDQILK 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +  F + + +  L +P A A+
Sbjct: 485 SFESFLIPQLSSSPPDVEAMRIYLILPEFPPFQDSKYYITLTLPLAMAI 533


>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
           porcellus]
          Length = 1050

 Score =  172 bits (437), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 191/386 (49%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q            
Sbjct: 95  HSLALSDQGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV----------- 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 143 -SCGNWHCLALATDGQFFTWGKNSHGQLGL-GKEFPSQTSPQRVRSLEGIPLAQVAAGGA 200

Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT +  L 
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    ++A  D    H    +VK+I+SGGD 
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSGGDQ 373

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +K  +   + DFR +N A     +N E +    +++ +  +  T++      +  
Sbjct: 374 TFVLCSKYENSSPAVDFRTVNQAHYTSLINDETIAIWRQKLSEHNNANTING-----VVQ 428

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 149/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQVCPKYFMKLVNLYKGAVLYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++++ DI+ DY  W   +     
Sbjct: 603  KV-----------------------KHVEYDTFYIPEISSLVDIQEDYLMWFLHQAGTKA 639

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIIQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 700  PFLVLHVRRSNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 792



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 131/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H + L + GEV+T G +T GQLG E    +    P+++  LA   ++    G SH     
Sbjct: 45  HCVFLLEDGEVYTCGLNTKGQLGHEREGNQ----PEQIGALADQHIIHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDQGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALATDG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     + T PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEK 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 823 GLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 857



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSMILEQILN 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
           africana]
          Length = 1050

 Score =  172 bits (436), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 192/386 (49%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q            
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV----------- 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 143 -SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVTAGGA 200

Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT + + N
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKN 260

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 261 --GGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    ++A  D    H    +VK+I+SGGD 
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSGGDQ 373

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +K  +   + DFR +N A     +N E +    +++ +  +  T++      +  
Sbjct: 374 TFVLCSKYENYSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNANTING-----VVQ 428

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 160/338 (47%), Gaps = 89/338 (26%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQVCPKYFMKLVNLYKGAVVYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++ + DI+ DY  W   +     
Sbjct: 603  KV-----------------------KHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKA 639

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIIQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 700  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMF 1104
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N                     
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHN--------------------- 786

Query: 1105 KEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                     WF            LIG +CGLAIYN TV
Sbjct: 787  ---------WFH-----------LIGIICGLAIYNSTV 804



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 130/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   +V    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV SL  +P+A +  G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEK 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ +GG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGV 263



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 70/95 (73%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG +CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGIICGLAIYNSTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E++F + F
Sbjct: 823 GLEDLKELSPTEGRSLQELLDYPGEDVEEIFCLNF 857



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  SL+    + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSLILEQILN 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
           caballus]
          Length = 1050

 Score =  172 bits (436), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 192/386 (49%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LAL+D G++F+WG  + GQLGL + +  + ++P+ ++ L   +++Q            
Sbjct: 95  HNLALSDRGQLFSWGAGSDGQLGLMTTE-DAVAVPRVIQKLNQQTILQV----------- 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WHSLAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 143 -SCGNWHSLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT +  L 
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    ++A  D    H    +VK+I+SGGD 
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSGGDQ 373

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +K  +   + DFR +N A     +N E +    +++ +  +  T++      +  
Sbjct: 374 TFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNANTING-----VVQ 428

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 150/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQVCPKYFMKLVNLYKGAVVYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++++ DI+ DY  W   +     
Sbjct: 603  KV-----------------------KHVEYDTFYIPEISSLVDIQEDYLMWFLHQAGMKA 639

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIIQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 700  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 792



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 130/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   +V    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  +LAL+D G++F+WG  + GQLGL + +  + ++P+ ++ L   +++Q   G  
Sbjct: 96  -------NLALSDRGQLFSWGAGSDGQLGLMTTED-AVAVPRVIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           H L L + G                                      + +TWG N +GQ+
Sbjct: 148 HSLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEE 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVEP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 823 GLEDLKELSPTEGRSLQELLDYPGEDIEETFCLNF 857



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSMILEQILN 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Taeniopygia guttata]
          Length = 1050

 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/390 (31%), Positives = 194/390 (49%), Gaps = 45/390 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL+D G++F+WG  + GQLGL + +  + ++P+ +K L   +++Q         
Sbjct: 92  GESHSVALSDQGQLFSWGAGSDGQLGLTTIED-AVTVPRLIKKLNQQTILQV-------- 142

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
               + G WH LAL   G+ FTWG +++GQLGL   +  SQ+ P+RVK L  + + Q  A
Sbjct: 143 ----SCGNWHCLALAADGQFFTWGQNSYGQLGL-GKECPSQASPQRVKSLDGIPLAQVAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----SDP-------------SQGVQSNLVQDSHTTI 165
           G +H   L+ SG V    K N  G    SD              SQ V      + HT +
Sbjct: 198 GGAHSFALSLSGAVFGWGK-NSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAV 256

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             L   G ++T+G    GQ+G ++ N  V  P+RV  L+   ++ IACG +H+     S 
Sbjct: 257 --LTKSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVSQIACGRHHTLAFVPSS 313

Query: 226 SRLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYS 284
             +YAFG G+  QL +  + + K P  + G W A    ++   D+   H    +VK I+S
Sbjct: 314 GMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKYH----IVKHIFS 369

Query: 285 GGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLL 344
           GGD + V  +K  + + +DDFR +N       +N E +     +V + K  E    + + 
Sbjct: 370 GGDQTFVLCSKYENSLPADDFRTINETRYTCLINDETI-----DVWRQKLLEKNSSNSVN 424

Query: 345 YLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
            +  +  S  C NGSFL+ + DEHF  + K
Sbjct: 425 NVVQILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 161/338 (47%), Gaps = 89/338 (26%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF RL+ ++K  ++YLL     +      + F+  ++  L++L+KL+ +N 
Sbjct: 546  NWWSQVCPRYFLRLVDLYKGAVVYLLSGRKTLLIP---VLFSSYITAALRLLEKLHKVNQ 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++++ DI+ DY  W   +     
Sbjct: 603  KV-----------------------KHVEYDKFYIPEISSLVDIQEDYLMWFLHQAGMKV 639

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIMQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 700  PFLVLHVRRSNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMF 1104
            +EF +LLLKE+L+P YGMF  Y E+  +WFS+  F + N                     
Sbjct: 748  KEFFLLLLKELLNPIYGMFTFYPESNLLWFSDTCFVEHN--------------------- 786

Query: 1105 KEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                     WF            LIG +CGLAIYN+TV
Sbjct: 787  ---------WFH-----------LIGIICGLAIYNFTV 804



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 131/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG +    K    P+++  LA   +V    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHDCEGSK----PEQIGALAGQHIVHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  S+AL+D G++F+WG  + GQLGL + +  + ++P+ +K L   +++Q   G  
Sbjct: 96  -------SVALSDQGQLFSWGAGSDGQLGLTTIED-AVTVPRLIKKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N YGQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGQNSYGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV+SL  +P+A +A G  HSF LS S   ++ +G  S+ QL  S + 
Sbjct: 170 GLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLS-GAVFGWGKNSSGQLGLSDER 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGV 263



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 48/95 (50%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y E+  +WFS+  F + N   LIG +CGLAIYN+T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTFYPESNLLWFSDTCFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ +LDY   D+E+ F + F
Sbjct: 823 CLEDLKELSPTEGRSLQQLLDYTGEDVEETFCLNF 857



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 60/109 (55%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSILLEQILK 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +  F + + +  L +P A A+
Sbjct: 485 SFESFLIPQLSSSPPDVEAMRIYLILPEFPLFQDSKYYISLTLPLAMAI 533


>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1036

 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 161/301 (53%), Gaps = 49/301 (16%)

Query: 795  QDILDYREPDLEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDIT 854
            + ++  ++  L++  G+  R+         FERL  ++K+ ++YLL+   +   +     
Sbjct: 521  KSVVSLKDAALKETGGLHLRS-------QSFERLAELYKKVVVYLLRMHKLGIPSVEQRI 573

Query: 855  FNRKLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLAT 914
            FN  L   L+ L+ L+++N +                       G  + Y  FY+ +L  
Sbjct: 574  FNCFLDTSLRFLEILHAVNEK----------------------AGHIIEYDKFYIHELDD 611

Query: 915  VCDIRIDYFRWISGR-----PNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQT 969
            + DIR DY  W   +     P+G     LC YPF+FDA+AKTTLL+ D  +QM+ A++Q 
Sbjct: 612  LVDIRNDYITWFQRQMFPTGPDGLVT--LCRYPFVFDAQAKTTLLQTDAVLQMQMAVDQA 669

Query: 970  NFYLFLQTFNP-HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAP 1028
                    F P  ++N  L + V RDNIV DT+  L +    D+KKPLKV          
Sbjct: 670  QMQNLSSLFMPVESVNPCLILIVRRDNIVGDTMEVLRKSKNVDYKKPLKV---------- 719

Query: 1029 QVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLI 1088
               F GEEA DAGGVR+EF +L++KE++DPKYGMF+ YEE+R IWFS  TFE+ +++ LI
Sbjct: 720  --IFVGEEAVDAGGVRKEFFLLIMKELMDPKYGMFRYYEESRLIWFSHKTFEEFDLFNLI 777

Query: 1089 G 1089
            G
Sbjct: 778  G 778



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 171/401 (42%), Gaps = 60/401 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+VF+WG  ++GQLGL + ++  + +P+ +K L+ V + Q   GY    
Sbjct: 92  GESHTLALNDKGQVFSWGLGSNGQLGLNNFEECVR-VPRNIKCLSDVQIAQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   WHS AL+  G+VF+WG +  GQLGL      S S P+ ++ L  +   Q  A
Sbjct: 147 --------WHSHALSKGGQVFSWGQNQFGQLGL-GMHGSSISTPQIIQSLQGIPFAQLSA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG-----------------SDPSQGVQSNLVQDSHTTI 165
           G +H   +T SG V    K N  G                 S  SQ V      + HT  
Sbjct: 198 GGAHSFAITLSGAVFGWGK-NKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTA- 255

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L     ++T+G   YGQ+G N +N  +  P++V  L+   +  I+CG+    +    V
Sbjct: 256 -ALTKLRGVFTFGAGGYGQLGHNCTNHEIN-PRKVFELMGNVVTQISCGSTRWLLRPPLV 313

Query: 226 SRLYAFGIGSAVQLDSPKSVHKTPQLIHGP-WIASPVAMTAGEDSLVSHSGGLVVKKIYS 284
              +   + +A  +  P +  K   L   P W        A    + S S     K  + 
Sbjct: 314 RCTHLGSVVTASLVPVPLATEKALPLSKVPSWPPVLRWNQARSSVMFSKSISAHPKTFFE 373

Query: 285 GGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDET--LDQDL 342
                     K   G+ +                       E  +++  S  +  L  ++
Sbjct: 374 YQVKVQQKKKKVKKGICTIS---------------------EESIQKWLSHSSGRLSLEI 412

Query: 343 LLYLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLSL 383
              ++ VF S  C+NGSFL   N +HFS +S KFS + ++L
Sbjct: 413 SSEIDLVFSSASCLNGSFLSTSNPDHFSTSS-KFSGVDVNL 452



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 114/233 (48%), Gaps = 58/233 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ L D G V+T G +  GQLG E + KK    P+ V  L +  +V    G S   
Sbjct: 42  GLKHTVFLLDDGTVYTCGCNDLGQLGHEKSRKK----PEHVVALDAQIIVAVSCGES--- 94

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    H+LALND G+VF+WG  ++GQLGL + ++  + +P+ +K L+ V + Q   
Sbjct: 95  ---------HTLALNDKGQVFSWGLGSNGQLGLNNFEECVR-VPRNIKCLSDVQIAQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H                                  SH    +L+  G++++WG N++
Sbjct: 145 GYWH----------------------------------SH----ALSKGGQVFSWGQNQF 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
           GQ+G+    ++++ PQ ++SL  +P A ++ G  HSF ++ S +    FG G 
Sbjct: 167 GQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGA---VFGWGK 216



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 70/101 (69%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YEE+R IWFS  TFE+ ++  LIG +CGLAIYN TI+ + FP+ALYKK
Sbjct: 747 PKYGMFRY----YEESRLIWFSHKTFEEFDLFNLIGVICGLAIYNLTIVELQFPVALYKK 802

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + + LQ +LDY E DLE++F + F
Sbjct: 803 LLKKKPTLDDLKELMPDVGRGLQALLDYTEDDLEEIFCLNF 843



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++ VF S  C+NGSFL   N +HFS +SK  GVD+ L +  +  + +     +  L++  
Sbjct: 416 IDLVFSSASCLNGSFLSTSNPDHFSTSSKFSGVDVNLARLLFHKVFQHNHPEITQLIAA- 474

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L +TPPD E+LR++LTLP    F +   +  + +PFA ++
Sbjct: 475 ---SLEKNLLPRLSSTPPDIESLRLYLTLPECPLFSDQNNYVTITIPFAKSV 523


>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
 gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
          Length = 1054

 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 191/386 (49%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q            
Sbjct: 99  HSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV----------- 146

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 147 -SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGA 204

Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT +  L 
Sbjct: 205 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 262

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 263 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 321

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    ++A  D    H    +VK+I+SGGD 
Sbjct: 322 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSGGDQ 377

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +K  +   + DFR +N A     +N E +    +++ +  +  T++      +  
Sbjct: 378 TFVLCSKYENYSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNANTING-----VVQ 432

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  + K
Sbjct: 433 ILSSAACWNGSFLEKKIDEHFKTSPK 458



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 149/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 550  NWWSQVCPKYFMKLVNLYKGAVLYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 606

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++ + DI+ DY  W   +     
Sbjct: 607  KV-----------------------KHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKA 643

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 644  RPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 703

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 704  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 751

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 752  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 796



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 131/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   ++    G SH     
Sbjct: 49  HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 99

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 100 -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 151

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 152 HCLALAADG--------------------------------------QFFTWGKNSHGQL 173

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 174 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEK 232

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 233 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 267



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 767 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 826

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 827 GLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 861



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 433 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSMILEQILN 488

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 489 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 537


>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
 gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Pan paniscus]
 gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Gorilla gorilla gorilla]
 gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           3
 gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
 gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
 gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
 gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
 gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
          Length = 1050

 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 191/386 (49%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q            
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV----------- 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 143 -SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT +  L 
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    ++A  D    H    +VK+I+SGGD 
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSGGDQ 373

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +K  +   + DFR +N A     +N E +    +++ +  +  T++      +  
Sbjct: 374 TFVLCSKYENYSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNANTING-----VVQ 428

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 149/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQVCPKYFMKLVNLYKGAVLYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++ + DI+ DY  W   +     
Sbjct: 603  KV-----------------------KHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKA 639

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 700  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 792



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 131/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   ++    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEK 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 97.4 bits (241), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 823 GLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 857



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSMILEQILN 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
          Length = 1050

 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 192/389 (49%), Gaps = 43/389 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q         
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV-------- 142

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
               + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 143 ----SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 197

Query: 123 GYSHCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTIT 166
           G +H   L+ SG V                  +E+ C      +Q V      + HT + 
Sbjct: 198 GGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAV- 256

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            L   G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S  
Sbjct: 257 -LTKSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
            +YAFG G+  QL +  + + K P  + G W A    ++A  D    H    +VK+I+SG
Sbjct: 315 LIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARSDRFKYH----IVKQIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD + V  +K  +   + DFR +N A     +N E +    +++ +  +  T++      
Sbjct: 371 GDQTFVLCSKYENYSPAIDFRTVNQAHYTSLINDETIAVWRQKLSEHNNANTING----- 425

Query: 346 LETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  +  S  C NGSFL+ + DEHF  + K
Sbjct: 426 IVQILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 98/285 (34%), Positives = 150/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQVCPKYFMKLVNLYKGAVVYLLRGRKTFLIP---VRFNTYITAALKLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++++ DI+ DY  W   +     
Sbjct: 603  KV-----------------------KHVEYDTFYIPEISSLVDIQEDYLMWFLHQAGMKA 639

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIIQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 700  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  YE++  +WFS+  F + N + LIG
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYEDSSLLWFSDTCFVEHNWFHLIG 792



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 131/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   +V    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIVHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEE 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/95 (50%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T YE++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYEDSSLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 823 GLEDLKELSPTEGRSLQELLDYPGEDIEETFCLNF 857



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSMILEQILN 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP      + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPECPLLQDSKYYITLTIPLAMAI 533


>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform 1
            [Meleagris gallopavo]
          Length = 1048

 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/285 (35%), Positives = 154/285 (54%), Gaps = 44/285 (15%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ ++K  +++LL+   +    +    F   L    +VL+ L+ 
Sbjct: 543  VLENWWSVLEAPLFLKIVELYKDVVVHLLKLYKIGIPPSERRIFTNFLHTAFRVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N                         G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNER-----------------------GQVIQYDRFYIHEIQDLIDIRNDYVNWVQQQVF 639

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFY----LFLQTFNPHTLN 984
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +      LFL  F   ++N
Sbjct: 640  GMLTDMPVTICTYPFVFDAQAKTTLLQTDAVMQMQMAVDQAHRQNLSSLFLPVF--ESVN 697

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
              L + V RDNIV D +  L +  + D+KKPLKV             F GEEA D GGVR
Sbjct: 698  PCLILMVRRDNIVGDAVEVLRKTKSVDYKKPLKV------------IFVGEEAVDVGGVR 745

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +L+++E+LDPKYGMF+ YEE+R IWFS+ TFED +++ LIG
Sbjct: 746  KEFFLLIMRELLDPKYGMFRYYEESRLIWFSDKTFEDSDLFHLIG 790



 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 192/399 (48%), Gaps = 48/399 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG  T GQLGL   + +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLATDGQLGLPGTE-ECIRVPRNIKSLSEIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF+WG + +GQLGL   + K Q+ P  +K L  +   Q  A
Sbjct: 147 --------YHSLALSKGSEVFSWGQNKYGQLGL-GYEYKKQNSPHVIKSLLGIPFAQIAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQ------------DSHTTIT 166
           G +H  VLT SG +    +      G   D  + V + L              + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  I CG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W+          DS   +     VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWLPYSTQCLIPADSEQYY----CVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKS--DETLDQDLL 343
           GD S        + V  DDFR  +   QI  VN       E  +++L +     L  ++ 
Sbjct: 371 GDQSFAHYFYPQNMVPPDDFRYPDLLKQIWTVN-------ETFIQRLLTFPSGRLPVEIA 423

Query: 344 LYLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
             ++  F S GC+NGSFL + ND+H+   S +FS + ++
Sbjct: 424 NEIDGTFSSAGCLNGSFLALSNDDHYK-TSVRFSGVDMN 461



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YEE+R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 759 PKYGMFRY----YEESRLIWFSDKTFEDSDLFHLIGVVCGLAIYNFTIVDLHFPLALYKK 814

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L++   L DLK+L P + + +Q +LDY E D+E+ F + F
Sbjct: 815 LLNKKPSLDDLKELMPDVGRGMQQLLDYPEDDIEEAFCLNF 855



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 124/278 (44%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E A K+    P+ V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKARKR----PEHVGALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG  T GQLGL   ++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLATDGQLGLPGTEE-CIRVPRNIKSLSEIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+                                         E+++WG N+Y
Sbjct: 145 GYYHSLALSKGS--------------------------------------EVFSWGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         P  ++SL+ +P A IA G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             +    P L+        V +  GED  + ++  GG+
Sbjct: 226 DDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGV 263



 Score = 61.2 bits (147), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL + ND+H+  + +  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSAGCLNGSFLALSNDDHYKTSVRFSGVDMNAARLLFHKLIQPDHAHISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR++LTLP      +      L +PF  A+
Sbjct: 484 --ASLEKNLIPKLSSSLPDVEALRLYLTLPECPLMSDANNFTTLAIPFGTAI 533


>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
           gallus]
          Length = 1056

 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 192/399 (48%), Gaps = 48/399 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG  T GQLGL   + +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLATDGQLGLPGTE-ECIRVPRNIKSLSEIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF+WG + +GQLGL   + K Q+ P  +K L  +   Q  A
Sbjct: 147 --------YHSLALSKGSEVFSWGQNKYGQLGL-GYEYKKQNSPHVIKSLLGIPFAQIAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQ------------DSHTTIT 166
           G +H  VLT SG +    +      G   D  + V + L              + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  I CG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W+          DS   +     VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWLPYSTQCLIPADSEQYY----CVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKS--DETLDQDLL 343
           GD S        + V  DDFR  +   QI  VN       E  +++L +     L  ++ 
Sbjct: 371 GDQSFAHYFYPQNMVPPDDFRYPDLLKQIWTVN-------ETFIQRLLTFPSGRLPVEIA 423

Query: 344 LYLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
             ++  F S GC+NGSFL + ND+H+   S +FS + ++
Sbjct: 424 NEIDGTFSSAGCLNGSFLALSNDDHYK-TSVRFSGVDMN 461



 Score =  165 bits (417), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 153/293 (52%), Gaps = 52/293 (17%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ ++K  +++LL+   +    +    F   L    +VL+ L+ 
Sbjct: 543  VLENWWSVLEPPLFLKIVELYKDVVVHLLKLYKIGIPPSERRIFTNFLHTAFRVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N                         G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNER-----------------------GQVIQYDRFYIHEIQDLIDIRNDYVNWVQQQVF 639

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFY----LFLQ 976
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +      LFL 
Sbjct: 640  GMDVNHGLTELTDMPVTICTYPFVFDAQAKTTLLQTDAVMQMQMAVDQAHRQNLSSLFLP 699

Query: 977  TFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEE 1036
             F   ++N  L + V RDNIV D +  L +    D+KKPLKV             F GEE
Sbjct: 700  VFE--SVNPCLILMVRRDNIVGDAVEVLRKTKNVDYKKPLKV------------IFVGEE 745

Query: 1037 AEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            A D GGVR+EF +L+++E+LDPKYGMF+ YEE+R IWFS+ TFED +++ LIG
Sbjct: 746  AVDVGGVRKEFFLLIMRELLDPKYGMFRYYEESRLIWFSDKTFEDSDLFHLIG 798



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YEE+R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 767 PKYGMFRY----YEESRLIWFSDKTFEDSDLFHLIGVVCGLAIYNFTIVDLHFPLALYKK 822

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L++   L DLK+L P + + +Q +LDY E D+E+ F + F
Sbjct: 823 LLNKKPSLDDLKELMPDVGRGMQQLLDYPEDDIEEAFCLNF 863



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 124/278 (44%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E A K+    P+ V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKARKR----PEHVGALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG  T GQLGL   ++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLATDGQLGLPGTEE-CIRVPRNIKSLSEIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+                                         E+++WG N+Y
Sbjct: 145 GYYHSLALSKGS--------------------------------------EVFSWGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         P  ++SL+ +P A IA G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             +    P L+        V +  GED  + ++  GG+
Sbjct: 226 DDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGV 263



 Score = 61.2 bits (147), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL + ND+H+  + +  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSAGCLNGSFLALSNDDHYKTSVRFSGVDMNAARLLFHKLIQPDHAHISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR++LTLP      +      L +PF  A+
Sbjct: 484 --ASLEKNLIPKLSSSLPDVEALRLYLTLPECPLMSDANNFTTLAIPFGTAI 533


>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus laevis]
 gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
          Length = 897

 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 197/399 (49%), Gaps = 46/399 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+VF+WG   HGQ+G+  A+   + +P+ +K L+ + +VQ   G+    
Sbjct: 92  GEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIR-VPRNIKSLSDIQIVQVACGHH--- 147

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HSLAL+    +++WG + +GQLGL S +K+ +S P+ +K L+ +      A
Sbjct: 148 ---------HSLALSKESNIYSWGQNQYGQLGLGS-EKRKESAPRHIKSLSGIPFAHIAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----------SDP-------SQGVQSNLVQDSHTTI 165
           G  H   LT SG +    + N  G          SDP       SQ +      + HT  
Sbjct: 198 GGGHSFALTISGAIFGWGR-NKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHT-- 254

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L   G ++T+G   YGQ+G N+++  V  P++V  L+   +  IACG  H+     S 
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSASHEVN-PRKVFELMGNIVTQIACGRQHTLAFVPSS 313

Query: 226 SRLYAFGIGSAVQLD-SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYS 284
            R+Y+FG+G   QL     S  K+P ++ G W+     +      L   +G   VK+IYS
Sbjct: 314 GRIYSFGLGGNGQLGIGSTSNKKSPSMVKGNWLTHEDYVR----RLPEANGCYCVKRIYS 369

Query: 285 GGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLL 344
           GGD S        + +  DDFR  N + +I  ++   ++          S   L  +++ 
Sbjct: 370 GGDQSFAHYFTIQNCLPPDDFRKCNCSRKIWTLDEALIRRWLN-----YSSGRLPPEIVN 424

Query: 345 YLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLSL 383
            ++ VF S   +NGSFL   N++H+  +S KFS + +++
Sbjct: 425 EIDKVFSSAASLNGSFLSTSNNDHYRTSS-KFSGVDMNV 462



 Score =  170 bits (431), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 166/342 (48%), Gaps = 83/342 (24%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ L+    + R++ ++K  +++LL+ P           F   L+    VL+ L+ 
Sbjct: 543  VLENWWSLLEPTLYMRIVQLYKDVVVHLLKLPNNRIPPAEQWIFYTFLNTAFGVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +                        + ++Y  FY+ ++    DIR DYF W   + +
Sbjct: 603  VNEKA----------------------AQIISYDKFYIHEVQDFVDIRKDYFNWFQQQAS 640

Query: 932  GSTRD---FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++  N       F+P   +++  
Sbjct: 641  GMIADPPVTICTYPFVFDAQAKTTLLQTDAVMQMQEAVDNANRQNISSWFHPIVESVDTC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V RDNIV D +  L +    D+KKP++V             F GEEA DAGGVR+E
Sbjct: 701  LILIVRRDNIVGDAMEVLRKTKNIDYKKPMRV------------IFVGEEAVDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F +L+++E+LDPKYGMF+ Y+++R IWFS+ TFED +++ L                   
Sbjct: 749  FFLLVMRELLDPKYGMFRYYKKSRLIWFSDQTFEDIDLFHL------------------- 789

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV---RFP 1145
                                  IG +CGLAIYN+T+   +FP
Sbjct: 790  ----------------------IGVVCGLAIYNFTIIELKFP 809



 Score =  109 bits (273), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    Y+++R IWFS+ TFED ++  LIG +CGLAIYN+TII + FPLALYKK
Sbjct: 760 PKYGMFRY----YKKSRLIWFSDQTFEDIDLFHLIGVVCGLAIYNFTIIELKFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L+DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLQKKPSLEDLKELKPVVGRSMQRLLDYTEDDIEETFCLYF 856



 Score =  103 bits (257), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+  + D G V+T G +  GQLG + + KK    P++V  L +  +V    G +H  
Sbjct: 42  GNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRKK----PEQVGALDAQIIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+VF+WG   HGQ+G+  A+   + +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVFSWGHAAHGQIGVSIAEDYIR-VPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G+ H L L+                      +SN+                 Y+WG N+Y
Sbjct: 145 GHHHSLALSK---------------------ESNI-----------------YSWGQNQY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G+ +     + P+ ++SL  +P A IA G  HSF L+ S   ++ +G     QL   
Sbjct: 167 GQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTIS-GAIFGWGRNKFGQLGLN 225

Query: 243 KSVHKT-PQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
               ++ P L+        + +  GED  + ++  GG+
Sbjct: 226 DETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGV 263



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++ VF S   +NGSFL   N++H+  +SK  GVDM + +   + +    +  +   V+  
Sbjct: 426 IDKVFSSAASLNGSFLSTSNNDHYRTSSKFSGVDMNVARLLLNKLMDPSQPQIAQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++PPD E LR++LTLP             L +PFA A+
Sbjct: 484 --ASLEKNLIPRLTSSPPDIECLRLYLTLPECPLMTETNNFRSLAIPFAKAI 533


>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Meleagris gallopavo]
          Length = 1056

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 192/399 (48%), Gaps = 48/399 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG  T GQLGL   + +   +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLATDGQLGLPGTE-ECIRVPRNIKSLSEIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF+WG + +GQLGL   + K Q+ P  +K L  +   Q  A
Sbjct: 147 --------YHSLALSKGSEVFSWGQNKYGQLGL-GYEYKKQNSPHVIKSLLGIPFAQIAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQ------------DSHTTIT 166
           G +H  VLT SG +    +      G   D  + V + L              + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  I CG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +   S  K+P  + G W+          DS   +     VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWLPYSTQCLIPADSEQYY----CVKRIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKS--DETLDQDLL 343
           GD S        + V  DDFR  +   QI  VN       E  +++L +     L  ++ 
Sbjct: 371 GDQSFAHYFYPQNMVPPDDFRYPDLLKQIWTVN-------ETFIQRLLTFPSGRLPVEIA 423

Query: 344 LYLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
             ++  F S GC+NGSFL + ND+H+   S +FS + ++
Sbjct: 424 NEIDGTFSSAGCLNGSFLALSNDDHYK-TSVRFSGVDMN 461



 Score =  166 bits (419), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 154/293 (52%), Gaps = 52/293 (17%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ ++K  +++LL+   +    +    F   L    +VL+ L+ 
Sbjct: 543  VLENWWSVLEAPLFLKIVELYKDVVVHLLKLYKIGIPPSERRIFTNFLHTAFRVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N                         G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 603  VNER-----------------------GQVIQYDRFYIHEIQDLIDIRNDYVNWVQQQVF 639

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFY----LFLQ 976
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +      LFL 
Sbjct: 640  GMDVNHGLTELTDMPVTICTYPFVFDAQAKTTLLQTDAVMQMQMAVDQAHRQNLSSLFLP 699

Query: 977  TFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEE 1036
             F   ++N  L + V RDNIV D +  L +  + D+KKPLKV             F GEE
Sbjct: 700  VFE--SVNPCLILMVRRDNIVGDAVEVLRKTKSVDYKKPLKV------------IFVGEE 745

Query: 1037 AEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            A D GGVR+EF +L+++E+LDPKYGMF+ YEE+R IWFS+ TFED +++ LIG
Sbjct: 746  AVDVGGVRKEFFLLIMRELLDPKYGMFRYYEESRLIWFSDKTFEDSDLFHLIG 798



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YEE+R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 767 PKYGMFRY----YEESRLIWFSDKTFEDSDLFHLIGVVCGLAIYNFTIVDLHFPLALYKK 822

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L++   L DLK+L P + + +Q +LDY E D+E+ F + F
Sbjct: 823 LLNKKPSLDDLKELMPDVGRGMQQLLDYPEDDIEEAFCLNF 863



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 124/278 (44%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E A K+    P+ V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKARKR----PEHVGALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG  T GQLGL   ++    +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLATDGQLGLPGTEE-CIRVPRNIKSLSEIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+                                         E+++WG N+Y
Sbjct: 145 GYYHSLALSKGS--------------------------------------EVFSWGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         P  ++SL+ +P A IA G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             +    P L+        V +  GED  + ++  GG+
Sbjct: 226 DDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGV 263



 Score = 61.2 bits (147), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL + ND+H+  + +  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSAGCLNGSFLALSNDDHYKTSVRFSGVDMNAARLLFHKLIQPDHAHISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR++LTLP      +      L +PF  A+
Sbjct: 484 --ASLEKNLIPKLSSSLPDVEALRLYLTLPECPLMSDANNFTTLAIPFGTAI 533


>gi|60098605|emb|CAH65133.1| hypothetical protein RCJMB04_3p16 [Gallus gallus]
          Length = 756

 Score =  170 bits (431), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 164/338 (48%), Gaps = 85/338 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ ++K  +++LL+   +    +    F   L    +VL+ L+ 
Sbjct: 251  VLENWWSVLEPPLFLKIVELYKDVVVHLLKLYKIGIPPSERRIFTNFLHTAFRVLEILHR 310

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N                         G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 311  VNER-----------------------GQVIQYDRFYIHEIQDLIDIRNDYVNWVQQQVF 347

Query: 932  GSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFY----LFLQTFNPHTLN 984
            G   D    +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +      LFL  F   ++N
Sbjct: 348  GMLTDMPVTICTYPFVFDAQAKTTLLQTDAVMQMQMAVDQAHRQNLSSLFLPVF--ESVN 405

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
              L + V RDNIV D +  L +    D+KKPLKV             F GEEA D GGVR
Sbjct: 406  PCLILMVRRDNIVGDAVEVLRKTKNVDYKKPLKV------------IFVGEEAVDVGGVR 453

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMF 1104
            +EF +L+++E+LDPKYGMF+ YEE+R IWFS+ TFED +++ L                 
Sbjct: 454  KEFFLLIMRELLDPKYGMFRYYEESRLIWFSDKTFEDSDLFHL----------------- 496

Query: 1105 KEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                    IG +CGLAIYN+T+
Sbjct: 497  ------------------------IGVVCGLAIYNFTI 510



 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YEE+R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 467 PKYGMFRY----YEESRLIWFSDKTFEDSDLFHLIGVVCGLAIYNFTIVDLHFPLALYKK 522

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L++   L DLK+L P + + +Q +LDY E D+E+ F + F
Sbjct: 523 LLNKKPSLDDLKELMPDVGRGMQQLLDYPEDDIEEAFCLNF 563



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 15/178 (8%)

Query: 208 IALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAG 266
           +  I CG  H+     S  R+Y+FG+G   QL +   S  K+P  + G W+         
Sbjct: 5   VTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWLPYSTQCLIP 64

Query: 267 EDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECE 326
            DS   +     VK+I+SGGD S        + V  DDFR  +   QI  VN       E
Sbjct: 65  ADSEQYYC----VKRIFSGGDQSFAHYFYPQNMVPPDDFRYPDLLKQIWTVN-------E 113

Query: 327 REVEQLKS--DETLDQDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
             +++L +     L  ++   ++  F S GC+NGSFL + ND+H+   S +FS + ++
Sbjct: 114 TFIQRLLTFPSGRLPVEIANEIDGTFSSAGCLNGSFLALSNDDHYK-TSVRFSGVDMN 170



 Score = 47.8 bits (112), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 5/112 (4%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL + ND+H+  + +  GVDM   +  +  + + +   +   V+  
Sbjct: 135 IDGTFSSAGCLNGSFLALSNDDHYKTSVRFSGVDMNAARLLFHKLIQPDHAHISQQVAA- 193

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD + L+  LTLP      +      L +PF  A+
Sbjct: 194 ---SLEKNLIPKLSSSLPDVK-LKADLTLPECPLMSDANNFTTLAIPFGTAI 241


>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 679

 Score =  170 bits (431), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 129/391 (32%), Positives = 194/391 (49%), Gaps = 49/391 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL HSLAL + G++F+WG +  GQLG    D  S   P+ +K +A+ +VVQ   G+SHCL
Sbjct: 97  GLSHSLALTNWGQLFSWGSNATGQLG-HDLDMVSYPAPRMIKSIATKTVVQISCGHSHCL 155

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            LT++            GE+F WG + +GQLGL +  KK  +    VK LA + +     
Sbjct: 156 ALTNS------------GELFAWGANEYGQLGLGTTGKKVPT-ATLVKSLAGIPIAFIAC 202

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN------------- 169
           G +H   ++ SG +    K N  G      + S        T+ SL              
Sbjct: 203 GGNHSFAVSKSGAIFGWGK-NTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVF 261

Query: 170 --SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
               G ++T G   +GQ+G       +  P+ V  L+   I  IACG  H+     S  +
Sbjct: 262 LTQEGGVFTCGLGTFGQLGHGTHGNEIL-PRMVFELMGSKITQIACGRKHTLAFVPSRGK 320

Query: 228 LYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           +Y FG+G   QL    SV   TPQ++ GPW+++ +   A + +L+       V KI+SGG
Sbjct: 321 VYGFGLGGVGQLGVGSSVSFNTPQIVRGPWVSNWI--DAAQSTLI-------VGKIFSGG 371

Query: 287 DHSIVTV---TKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLL 343
           D   V++     + +   S DFR+ +P TQIL +      +  RE+  +++++TLD DL+
Sbjct: 372 DRCFVSLLSDASAGEACGSADFRLYSPDTQILSLT----ADASRELAAVQAEQTLDMDLI 427

Query: 344 LYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
             +ETVF S  C N S+L + N EHF C SK
Sbjct: 428 SLVETVFKSLACFNASWL-LPNYEHFCCTSK 457



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 114/234 (48%), Gaps = 53/234 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+L L   G+++T G + HGQLG ++ +  ++  P+ +  L +  V Q   G SH     
Sbjct: 47  HTLLLTKDGKLYTCGNNDHGQLGHDTNNLPNKR-PQFISALENYIVTQVSCGLSH----- 100

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL + G++F+WG +  GQLG    D  S   P+ +K +A+ +VVQ   G+S
Sbjct: 101 -------SLALTNWGQLFSWGSNATGQLG-HDLDMVSYPAPRMIKSIATKTVVQISCGHS 152

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL LT+SG                                      EL+ WG NEYGQ+
Sbjct: 153 HCLALTNSG--------------------------------------ELFAWGANEYGQL 174

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           G+  +   V     V+SL  +PIA IACG NHSF +SKS   ++ +G  +  QL
Sbjct: 175 GLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKS-GAIFGWGKNTFGQL 227



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 73/115 (63%), Gaps = 5/115 (4%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           +ETVF S  C N S+L + N EHF C SK+PGVD+   ++ ++ I +IE ++++ L+   
Sbjct: 430 VETVFKSLACFNASWL-LPNYEHFCCTSKHPGVDVGAAEEAFECIRKIEHDTLKQLIWE- 487

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGALPAF 532
              A    L+ SL  +P D E LR++LTLP+YHEF+N + +  LH PF+ A+ + 
Sbjct: 488 ---AISTELLSSLVASPADVETLRVYLTLPMYHEFINAKNYAKLHSPFSQAVQSL 539



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 26/154 (16%)

Query: 815 NWYLLMSDDYFERLILIFKQCLIYLLQQ--PGVVDS-TNGDITFNRKLSFCLQVLQKLNS 871
            W+   + +YFERL+  FK  ++Y+++   P VV   T  +I +   L+  L ++  L  
Sbjct: 549 QWWSNQTKEYFERLLENFKNVVLYIMEFKFPKVVGGDTRQEIRYEPNLAAMLNLMAMLYK 608

Query: 872 LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
           +N+                +R        K+ Y  F++ ++  + DIR+DY RW+S   N
Sbjct: 609 INH---------------TLRI------EKLPYEQFHVNEIDDMFDIRLDYVRWVS-DTN 646

Query: 932 GSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHA 965
           G T   LCNYPF+F+A AKT LL+ DQ +QM  A
Sbjct: 647 G-TYFSLCNYPFVFNAAAKTLLLQTDQSLQMHQA 679


>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
          Length = 1017

 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 192/389 (49%), Gaps = 43/389 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q         
Sbjct: 139 GESHSLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQV-------- 189

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
               + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 190 ----SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 244

Query: 123 GYSHCLVLTSSGVVTC--------------THKENGCGSD--PSQGVQSNLVQDSHTTIT 166
           G +H   L+ SG V                  +E+ C      +Q V      + HT + 
Sbjct: 245 GGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAV- 303

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            L   G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S  
Sbjct: 304 -LTKSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSG 361

Query: 227 RLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
            +YAFG G+  QL +  + + K P  + G W A    ++A  D    H    +VK+I+SG
Sbjct: 362 LIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHNGQLSARADRFKYH----IVKQIFSG 417

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD + V  +K  +   + DFR +N A     +N E +    +++ +  +  T++      
Sbjct: 418 GDQTFVLCSKYENSSPAVDFRTVNQAHYTSLINDETIAVWRQKLSEHSNANTING----- 472

Query: 346 LETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  +  S  C NGSFL+ + DEHF  + +
Sbjct: 473 VVQILSSAACWNGSFLEKKIDEHFKTSPR 501



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 152/304 (50%), Gaps = 67/304 (22%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 593  NWWSQVCPKYFMKLVNLYKGAVVYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 649

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWI-------- 926
            +                        + V Y  FY+P+++++ DI+ DY  W         
Sbjct: 650  KV-----------------------KHVEYDTFYIPEISSLVDIQEDYLMWFLHQAGMVP 686

Query: 927  ------------SGRPNGSTRDF------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQ 968
                        S   +G   D       LC+YPFIFDA+AKT +L+ D  +QM+ A+N 
Sbjct: 687  YGAWVRGGSYFASSFSDGKELDLPMDSVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNG 746

Query: 969  TNF--YLFLQTFNPH-TLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIY 1025
             N      L T  P    + +L + V R+N+V D +REL+ ++  D KKPLKV       
Sbjct: 747  ANLQNVFMLLTLEPLLARSPFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------- 799

Query: 1026 LAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMY 1085
                  F GEEA DAGGV +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N +
Sbjct: 800  -----IFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWF 854

Query: 1086 FLIG 1089
             LIG
Sbjct: 855  HLIG 858



 Score =  114 bits (286), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 133/275 (48%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA  ++V    G SH     
Sbjct: 92  HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQNIVHVACGESH----- 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 143 -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 194

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 195 HCLALAADG--------------------------------------QFFTWGKNSHGQL 216

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV SL  +P+A +A G  HSF LS S   ++A+G+ +A QL  S + 
Sbjct: 217 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFAWGMNNAGQLGLSDEE 275

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 276 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 310



 Score = 97.1 bits (240), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 67/95 (70%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 829 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 888

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 889 GLDDLKELSPTEGRSLQELLDYPGEDIEETFCLNF 923



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + + PG+D+   +  ++ +      S  S++    + 
Sbjct: 476 ILSSAACWNGSFLEKKIDEHFKTSPRIPGIDLNSTRVLFEKLMN----SQHSMILEQILN 531

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 532 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYVTLTIPLAMAI 580


>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
          Length = 546

 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 194/411 (47%), Gaps = 72/411 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL+ +++  + +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIR-VPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   D + Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCQKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKE----------------NGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +    +                 N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  +ACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIA--SPVAMTAGEDSLVSHSGGLVVKKIY 283
           R+Y+FG+G   QL +   S  K+P  + G W +         G +          VK+I+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIGSEDY------FCVKRIF 368

Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLL 343
           SGGD S    +   +    DDFR  +P+ QI  VN                 E L Q  L
Sbjct: 369 SGGDQSFSHYSSPQNCGPPDDFRCSDPSKQIWTVN-----------------EALIQKWL 411

Query: 344 LY------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
            Y            ++  F S GC+NGSFL + ND+H+   + +FS + ++
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAISNDDHYRTGT-RFSGVDMN 461



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 131/278 (47%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVACGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL+ +++  + +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLQGSEECIR-VPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +                                       E++ WG N+Y
Sbjct: 145 GYYHSLALSKAS--------------------------------------EVFCWGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 60.8 bits (146), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL + ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAISNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDCNNFTTIAIPFGTAL 533


>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
 gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 1050

 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 190/386 (49%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q            
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV----------- 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 143 -SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQTSPQRVRSLEGIPLAQVAAGGA 200

Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT +  L 
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+  L  S   +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVN-PRRVLELMGSEVTQIACGRQHTLALVPSSGLIY 317

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    ++A  D         VVK+I+SGGD 
Sbjct: 318 AFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSGQLSARADRFKYR----VVKQIFSGGDQ 373

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +   +   + DFR +N A     +N E +    +++ +  +  T++      +  
Sbjct: 374 TFVLCSTYENSSPAVDFRTVNQAHYTNLINDETIAVWRQKLTEHNNANTVNG-----VVQ 428

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/285 (33%), Positives = 150/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+      YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQACPKYFMKLVTLYKSAVLYLLRGRKTFLIP---VLFNNYMTATLKLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRW------ISG 928
            +                        + V Y  FY+P+++++ DI+ DY  W      +  
Sbjct: 603  KV-----------------------KHVEYDKFYIPEISSLVDIQEDYLMWFLHQSGMKA 639

Query: 929  RPNGSTRDF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            RP+       LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIMQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+++V D +REL+ ++  D KKPLKV             F GEE  DAGGV 
Sbjct: 700  PFLVLHVRRNHLVGDALRELSIHSDIDLKKPLKV------------IFDGEEGVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 792



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 132/275 (48%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   ++    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     + T PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEK 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 98.2 bits (243), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 823 SLEDLKELSPTEGRSLQELLDYPGEDIEETFCLNF 857



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMH----SQHSMILEQILN 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus (Silurana) tropicalis]
 gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 1049

 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 195/410 (47%), Gaps = 68/410 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+VF+WG   +GQ+GL +A++  + +P+ +K L+ V +VQ   G+    
Sbjct: 92  GEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIR-VPRNIKSLSDVQIVQVACGHH--- 147

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HSLAL+   ++F+WG + +GQLGL   + K +  P+ +K L+ +      A
Sbjct: 148 ---------HSLALSKDSDIFSWGQNQYGQLGL-GLEIKKECAPRHIKSLSGIPFAHIAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQ------------DSHTTIT 166
           G  H   LT SG +    +      G   +  + V + L              + HT   
Sbjct: 198 GGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G N++N  V  P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLGHNSTNHEVN-PRKVFELMGSIVTQIACGRQHTLAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +  +++ K+P  + G W+     +      L   +G   +K+IYSG
Sbjct: 315 RIYSFGLGGNGQLGTGSTINRKSPFTVKGNWLTYEDYVR----HLPEANGCYCLKRIYSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S        +    DDFR  N               C R++  L  DE + Q  L Y
Sbjct: 371 GDQSFAHYITIQNCHPPDDFRRCN---------------CSRKIRTL--DEGVIQRWLNY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLSL 383
                       ++ VF S  C+NGSFL   N++H+   S KFS + +++
Sbjct: 414 SLGRLPLEIVNEIDKVFSSAACLNGSFLVTSNNDHY-MTSSKFSGVDMNV 462



 Score =  167 bits (424), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/283 (34%), Positives = 152/283 (53%), Gaps = 39/283 (13%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ L+    F +++ ++K  +++LL+             F R L+  L+VL+ L+ 
Sbjct: 543  VLENWWSLLEPPLFLKVVQLYKDVVVHLLKLSKNGIPLTERRLFYRFLNTALRVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +                        + + Y  FY+ ++    DI+ DY  WI  + +
Sbjct: 603  VNEK----------------------AAQIIPYDKFYIHEVQDFVDIQNDYINWIKQQAS 640

Query: 932  GSTRD---FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHT--LNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  IQM+ A++  +    L    P T  ++  
Sbjct: 641  GMVADPPVTICTYPFVFDAQAKTTLLQTDAVIQMQMAVDNAHRQNNLSWLFPATESVDPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V RDNIV D +  L +    D+KKP++V             F GEEA DAGGVR+E
Sbjct: 701  LILVVRRDNIVGDAMEVLRKTKNIDYKKPMRV------------IFFGEEAIDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            F +L+++E+LDPKYGMF+ YEE+R IWFS+ TFED +++ LIG
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEESRLIWFSDKTFEDSDLFHLIG 791



 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 130/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++ + D G V+T G +  GQLG + + +K    P++V  L +  +V    G +H  
Sbjct: 42  GSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRRK----PEQVGALDAQIIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+VF+WG   +GQ+GL +A++  + +P+ +K L+ V +VQ   
Sbjct: 96  ----------TLALNDKGQVFSWGHAVYGQIGLSTAEEYIR-VPRNIKSLSDVQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G+ H L L+                           +DS           ++++WG N+Y
Sbjct: 145 GHHHSLALS---------------------------KDS-----------DIFSWGQNQY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         P+ ++SL  +P A IA G  HSF L+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTIS-GAIFGWGRNKFGQLGLT 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        + +  GED  + ++  GG+
Sbjct: 226 DETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGV 263



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YEE+R IWFS+ TFED ++  LIG +CGLAIYN+TII + FPLALYKK
Sbjct: 760 PKYGMFRY----YEESRLIWFSDKTFEDSDLFHLIGVVCGLAIYNFTIIELHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L+DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKKKPSLEDLKELMPIIGRSMQQLLDYTEDDIEETFCLNF 856



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 55/221 (24%)

Query: 19  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALND 78
           WG  + GQLGL   D++    P+R     + +V     G  H + +             D
Sbjct: 4   WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVL------------D 51

Query: 79  CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC 138
            G V+T G +  GQLG + + +K    P++V  L +  +V    G +H L          
Sbjct: 52  DGTVYTCGCNDLGQLGHDKSRRK----PEQVGALDAQIIVAVSCGEAHTL---------- 97

Query: 139 THKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQ 198
                                       +LN  G++++WG+  YGQ+G++ +   +  P+
Sbjct: 98  ----------------------------ALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPR 129

Query: 199 RVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
            ++SL ++ I  +ACG +HS  LSK  S ++++G     QL
Sbjct: 130 NIKSLSDVQIVQVACGHHHSLALSKD-SDIFSWGQNQYGQL 169



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++ VF S  C+NGSFL   N++H+  +SK  GVDM + +     +    +  +   V+  
Sbjct: 426 IDKVFSSAACLNGSFLVTSNNDHYMTSSKFSGVDMNVARLLLHKLMDPSQPQIAQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++PPD E LR++L LP      +      L +PF  A+
Sbjct: 484 --ASLEKNLIPRLTSSPPDIECLRLYLILPECPPMADANNLTSLAIPFGTAI 533


>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
            latipes]
          Length = 1059

 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/292 (35%), Positives = 153/292 (52%), Gaps = 51/292 (17%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +    F+RL+ +++  ++YLLQ   V   +     F   L   L++L+ L+ +N 
Sbjct: 544  NWWSTLEPPVFQRLVDLYRDVVLYLLQMHKVGIPSVESRIFTCFLDTSLRLLELLHKVNE 603

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGR----- 929
                                    G+ + Y  FY+ +L  + DIR DY  WI  +     
Sbjct: 604  RA----------------------GQIIRYDKFYIHELDELIDIRHDYVTWIQRQMYPLC 641

Query: 930  --------PNGSTRDF--LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFN 979
                    P+        LC YPF+FDA+AKTTLL+ D  IQM+ A++Q     F   F 
Sbjct: 642  LSAEASVLPHQGHDGVVTLCKYPFVFDAQAKTTLLQTDAVIQMQMAVDQAQLQNFSSMFM 701

Query: 980  P--HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEA 1037
            P   ++N  L + V R+NIV DT+  L +    D+KKPLKV             F GE+A
Sbjct: 702  PAVESVNPCLILIVRRENIVGDTMEVLRKSKNVDYKKPLKV------------IFVGEDA 749

Query: 1038 EDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             DAGGVR+EF +L++KE+LDPKYGMF+ +E++R IWFS  TFED +++ LIG
Sbjct: 750  VDAGGVRKEFFLLIMKELLDPKYGMFRYHEDSRLIWFSNKTFEDIDLFNLIG 801



 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 196/392 (50%), Gaps = 51/392 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+VF+WG  + GQLGL + ++  + +P+ +K L+ V V Q   GY    
Sbjct: 92  GESHTLALNDKGQVFSWGLGSDGQLGLNNFEECIR-VPRNIKSLSDVQVAQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   WHSLAL+  G +F+WG + +GQLGL     +S S+P+ ++ L  +   Q  A
Sbjct: 147 --------WHSLALSKGGHIFSWGQNRYGQLGL-GMTGQSISVPQHLQSLQGIPFAQIAA 197

Query: 123 GYSHCLVLTSSGVV-----------TCTHKENGCGSDPSQGVQSNLV-----QDSHTTIT 166
           G +H   LT SG V                 + C     + ++S  V      + HT   
Sbjct: 198 GGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTA-- 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G N++N  V  P++V  L+   +  IACG  H+   + S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLGHNSTNHEVN-PRKVFELMGNVVTQIACGRQHTLAFTPSSG 314

Query: 227 RLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTA--GEDSLVSHSGGLVVKKIY 283
           ++ +FG+G   QL +  + + K+P  + GPW +S  +  +  GE          VV +IY
Sbjct: 315 KMDSFGLGGNGQLGTRSTCNRKSPAPVKGPWASSSASSDSDIGESC--------VVNRIY 366

Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKE-CEREVEQLKSDETLDQDL 342
           +GGD S    + SS+  + +  R+     +I  VN + L+    +   +L  + + + DL
Sbjct: 367 AGGDQSFAHYSSSSNEQMMESDRIQGLHRRICTVNEDVLQTWLNQPAGRLPLEMSKEIDL 426

Query: 343 LLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
                 +F S  C+NGSFL   + +HFS +SK
Sbjct: 427 ------IFSSASCINGSFLSSSHPDHFSTSSK 452



 Score =  104 bits (260), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+  L + G V+T G +  GQLG E + KK    P++V  L +  +V    G SH  
Sbjct: 42  GRRHTAFLLEDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQIIVALSCGESH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+VF+WG  + GQLGL + ++  + +P+ +K L+ V V Q   
Sbjct: 96  ----------TLALNDKGQVFSWGLGSDGQLGLNNFEECIR-VPRNIKSLSDVQVAQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+  G                                       +++WG N Y
Sbjct: 145 GYWHSLALSKGG--------------------------------------HIFSWGQNRY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G+  +  +++ PQ ++SL  +P A IA G  HSF L+ S   ++ +G     QL   
Sbjct: 167 GQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLS-GAVFGWGRNKFGQLGLN 225

Query: 243 KSVHKT-PQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            +  +  P L+        + ++ GED  + ++  GG+
Sbjct: 226 DTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGV 263



 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 70/101 (69%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    +E++R IWFS  TFED ++  LIG +CGLAIYN TI+ + FPLALYKK
Sbjct: 770 PKYGMFRY----HEDSRLIWFSNKTFEDIDLFNLIGLICGLAIYNLTIVELHFPLALYKK 825

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +SLQ +LDY E D+E+ F + F
Sbjct: 826 LLKKKPTLDDLKELMPDVGRSLQQLLDYTEDDVEETFCLNF 866



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++ +F S  C+NGSFL   + +HFS +SK  GVDM   +     + + E   +   V+  
Sbjct: 424 IDLIFSSASCINGSFLSSSHPDHFSTSSKCSGVDMNTARLLLHKVTQKEHREISEQVA-- 481

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L  +PPD EALR++LTLP    F +      + +PFA ++
Sbjct: 482 --ASLEKNLIPRLSPSPPDIEALRLYLTLPESPLFWDRNNFVTITIPFAKSV 531


>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
          Length = 546

 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 127/411 (30%), Positives = 193/411 (46%), Gaps = 72/411 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+V+ WG D+ GQLGL+ +++  + +P+ +K L+ + +VQ   GY    
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIR-VPRNIKSLSDIQIVQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   EVF WG + +GQLGL   + + Q+ P+ +K L  +  +Q  A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIECQKQTSPQLIKSLLGIPFMQVAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKE----------------NGCGSDPSQGVQSNLVQDSHTTIT 166
           G +H  VLT SG +    +                 N   S  SQ +      + HT   
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIA--SPVAMTAGEDSLVSHSGGLVVKKIY 283
           R+Y+FG+G   QL +   S  K+P  + G W +         G +          VK+I+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIGSEDY------FCVKRIF 368

Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLL 343
           SGGD S    +        DDFR  +P+ QI  VN                 E L Q  L
Sbjct: 369 SGGDQSFSHYSSPQSCGPPDDFRRSDPSKQIWTVN-----------------EALIQKWL 411

Query: 344 LY------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
            Y            ++  F S GC+NGSFL V ND+H+   + +FS + ++
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 131/278 (47%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL+ +++  + +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLQGSEECIR-VPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +                                       E++ WG N+Y
Sbjct: 145 GYYHSLALSKAS--------------------------------------EVFCWGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        V +  GED  + ++  GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHRLIQPDHPQISQQVA-- 483

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDCNNFTTIAIPFGTAL 533


>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 967

 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 195/410 (47%), Gaps = 68/410 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+VF+WG   +GQ+GL +A++  + +P+ +K L+ V +VQ   G+    
Sbjct: 92  GEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIR-VPRNIKSLSDVQIVQVACGHH--- 147

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HSLAL+   ++F+WG + +GQLGL   + K +  P+ +K L+ +      A
Sbjct: 148 ---------HSLALSKDSDIFSWGQNQYGQLGL-GLEIKKECAPRHIKSLSGIPFAHIAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQ------------DSHTTIT 166
           G  H   LT SG +    +      G   +  + V + L              + HT   
Sbjct: 198 GGGHSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G N++N  V  P++V  L+   +  IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLGHNSTNHEVN-PRKVFELMGSIVTQIACGRQHTLAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           R+Y+FG+G   QL +  +++ K+P  + G W+     +      L   +G   +K+IYSG
Sbjct: 315 RIYSFGLGGNGQLGTGSTINRKSPFTVKGNWLTYEDYVR----HLPEANGCYCLKRIYSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD S        +    DDFR  N               C R++  L  DE + Q  L Y
Sbjct: 371 GDQSFAHYITIQNCHPPDDFRRCN---------------CSRKIRTL--DEGVIQRWLNY 413

Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLSL 383
                       ++ VF S  C+NGSFL   N++H+   S KFS + +++
Sbjct: 414 SLGRLPLEIVNEIDKVFSSAACLNGSFLVTSNNDHY-MTSSKFSGVDMNV 462



 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/283 (34%), Positives = 151/283 (53%), Gaps = 39/283 (13%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ L+    F +++ ++K  +++LL+             F R L+  L+VL+ L+ 
Sbjct: 543  VLENWWSLLEPPLFLKVVQLYKDVVVHLLKLSKNGIPLTERRLFYRFLNTALRVLEILHR 602

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +                        + + Y  FY+ ++    DI+ DY  WI  + +
Sbjct: 603  VNEKA----------------------AQIIPYDKFYIHEVQDFVDIQNDYINWIKQQAS 640

Query: 932  GSTRD---FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHT--LNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  IQM+ A++  +    L    P T  +   
Sbjct: 641  GMVADPPVTICTYPFVFDAQAKTTLLQTDAVIQMQMAVDNAHRQNNLSWLFPATESVEPC 700

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V RDNIV D +  L +    D+KKP++V             F GEEA DAGGVR+E
Sbjct: 701  LILVVRRDNIVGDAMEVLRKTKNIDYKKPMRV------------IFFGEEAIDAGGVRKE 748

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            F +L+++E+LDPKYGMF+ YEE+R IWFS+ TFED +++ LIG
Sbjct: 749  FFLLIMRELLDPKYGMFRYYEESRLIWFSDKTFEDSDLFHLIG 791



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 130/278 (46%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++ + D G V+T G +  GQLG + + +K    P++V  L +  +V    G +H  
Sbjct: 42  GSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRRK----PEQVGALDAQIIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+VF+WG   +GQ+GL +A++  + +P+ +K L+ V +VQ   
Sbjct: 96  ----------TLALNDKGQVFSWGHAVYGQIGLSTAEEYIR-VPRNIKSLSDVQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G+ H L L+                           +DS           ++++WG N+Y
Sbjct: 145 GHHHSLALS---------------------------KDS-----------DIFSWGQNQY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+         P+ ++SL  +P A IA G  HSF L+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTIS-GAIFGWGRNKFGQLGLT 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++    P L+        + +  GED  + ++  GG+
Sbjct: 226 DETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGV 263



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YEE+R IWFS+ TFED ++  LIG +CGLAIYN+TII + FPLALYKK
Sbjct: 760 PKYGMFRY----YEESRLIWFSDKTFEDSDLFHLIGVVCGLAIYNFTIIELHFPLALYKK 815

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L+DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 816 LLKKKPSLEDLKELMPIIGRSMQQLLDYTEDDIEETFCLNF 856



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 55/224 (24%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           +  WG  + GQLGL   D++    P+R     + +V     G  H + +           
Sbjct: 1   MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVL---------- 50

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
             D G V+T G +  GQLG + + +K    P++V  L +  +V    G +H L       
Sbjct: 51  --DDGTVYTCGCNDLGQLGHDKSRRK----PEQVGALDAQIIVAVSCGEAHTL------- 97

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                                          +LN  G++++WG+  YGQ+G++ +   + 
Sbjct: 98  -------------------------------ALNDKGQVFSWGHAVYGQIGLSTAEEYIR 126

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
            P+ ++SL ++ I  +ACG +HS  LSK  S ++++G     QL
Sbjct: 127 VPRNIKSLSDVQIVQVACGHHHSLALSKD-SDIFSWGQNQYGQL 169



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 14/117 (11%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTI-----ARIERESVRS 472
           ++ VF S  C+NGSFL   N++H+  +SK  GVDM + +     +      +I +E   S
Sbjct: 426 IDKVFSSAACLNGSFLVTSNNDHYMTSSKFSGVDMNVARLLLHKLMDPSQPQIAQEVAAS 485

Query: 473 LVSNLAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           L  N         L+  L ++PPD E LR++L LP      +      L +PF  A+
Sbjct: 486 LEKN---------LIPRLTSSPPDIECLRLYLILPECPPMADANNLTSLAIPFGTAI 533


>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
          Length = 677

 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 198/402 (49%), Gaps = 52/402 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+VF+WG   HGQ+G+  A+   + +P+ +K L+ + +VQ   G+    
Sbjct: 92  GEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIR-VPRNIKSLSDIQIVQVACGHH--- 147

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HSLAL+    +++WG + +GQLGL S +K+ +S P+ +K L+ +      A
Sbjct: 148 ---------HSLALSKESNIYSWGQNQYGQLGLGS-EKRKESAPRHIKSLSGIPFAHIAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----------SDP-------SQGVQSNLVQDSHTTI 165
           G  H   LT SG +    + N  G          SDP       SQ +      + HT  
Sbjct: 198 GGGHSFALTISGAIFGWGR-NKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHT-- 254

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L   G ++T+G   YGQ+G N+++  V  P++V  L+   +  IACG  H+     S 
Sbjct: 255 AALTKEGGVFTFGAGGYGQLGHNSASHEVN-PRKVFELMGNIVTQIACGRQHTLAFVPSS 313

Query: 226 SRLYAFGIGSAVQLD-SPKSVHKTPQLIHGPWIASPVAMTAGED---SLVSHSGGLVVKK 281
            R+Y+FG+G   QL     S  K+P ++ G W+         ED    L   +G   VK+
Sbjct: 314 GRIYSFGLGGNGQLGIGSTSNKKSPSMVKGNWLTH-------EDYVRRLPEANGCYCVKR 366

Query: 282 IYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           IYSGGD S        + +  DDFR  N + +I  ++   ++          S   L  +
Sbjct: 367 IYSGGDQSFAHYFTIQNCLPPDDFRKCNCSRKIWTLDEALIRRWLN-----YSSGRLPPE 421

Query: 342 LLLYLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLSL 383
           ++  ++ VF S   +NGSFL   N++H+  +S KFS + +++
Sbjct: 422 IVNEIDKVFSSAASLNGSFLSTSNNDHYRTSS-KFSGVDMNV 462



 Score =  122 bits (307), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 133/554 (24%), Positives = 228/554 (41%), Gaps = 89/554 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+  + D G V+T G +  GQLG + + KK    P++V  L +  +V    G +H  
Sbjct: 42  GNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRKK----PEQVGALDAQIIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+VF+WG   HGQ+G+  A+   + +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVFSWGHAAHGQIGVSIAEDYIR-VPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G+ H L L+                      +SN+                 Y+WG N+Y
Sbjct: 145 GHHHSLALSK---------------------ESNI-----------------YSWGQNQY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+ +     + P+ ++SL  +P A IA G  HSF L+ S   ++ +G     QL  +
Sbjct: 167 GQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTIS-GAIFGWGRNKFGQLGLN 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGLVVKKIYSGGDHSIVTVTKSSDG 299
            ++    P L+        + +  GED  + ++  GG+      +GG   +   + S + 
Sbjct: 226 DETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFT--FGAGGYGQLGHNSASHEV 283

Query: 300 VLSDDFRVL-NPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNG 358
                F ++ N  TQI       L                +  L +   +   SP  + G
Sbjct: 284 NPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVKG 343

Query: 359 SFLQVEN-------DEHFSCNSKKFSFIKLSLINWFMKLHFSIFGQGFGCVCPT---VLG 408
           ++L  E+            C  + +S    S  ++F   +         C C      L 
Sbjct: 344 NWLTHEDYVRRLPEANGCYCVKRIYSGGDQSFAHYFTIQNCLPPDDFRKCNCSRKIWTLD 403

Query: 409 DCVPKSWLYLETVFLSPGCMN-------------GSFLQVENDEHFSCNSKNPGVDMQLC 455
           + + + WL   +  L P  +N             GSFL   N++H+  +SK  GVDM + 
Sbjct: 404 EALIRRWLNYSSGRLPPEIVNEIDKVFSSAASLNGSFLSTSNNDHYRTSSKFSGVDMNVA 463

Query: 456 QDCYDTIARIERESVRSLVSNLAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNP 515
           +   + +    +  +   V+     +   +L+  L ++PPD E LR++LTLP        
Sbjct: 464 RLLLNKLMDPSQPQIAQQVA----ASLEKNLIPRLTSSPPDIECLRLYLTLPECPLMTET 519

Query: 516 RQHEILHMPFAGAL 529
                L +PFA A+
Sbjct: 520 NNFRSLAIPFAKAI 533



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 25/148 (16%)

Query: 813 FRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSL 872
             NW+ L+    + R++ ++K  +++LL+ P           F   L+    VL+ L+ +
Sbjct: 544 LENWWSLLEPTLYMRIVQLYKDVVVHLLKLPNNRIPPAEQWIFYTFLNTAFGVLEILHRV 603

Query: 873 NNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNG 932
           N +                        + ++Y  FY+ ++    DIR DYF W   + +G
Sbjct: 604 NEKA----------------------AQIISYDKFYIHEVQDFVDIRKDYFNWFQQQASG 641

Query: 933 STRD---FLCNYPFIFDAKAKTTLLEMD 957
              D    +C YPF+FDA+AKTTLL+ D
Sbjct: 642 MIADPPVTICTYPFVFDAQAKTTLLQTD 669


>gi|119574650|gb|EAW54265.1| hect domain and RLD 4, isoform CRA_e [Homo sapiens]
          Length = 947

 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 156/291 (53%), Gaps = 47/291 (16%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 433  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 492

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +                       G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 493  VNEKM----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 530

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 531  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 590

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 591  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 638

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ LIG
Sbjct: 639  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHLIG 689



 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 163/385 (42%), Gaps = 88/385 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  AG +H  
Sbjct: 35  GYYHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSF 93

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           VLT +            G +F WG +  GQLGL   D+  + +P  +K L S  +V  C 
Sbjct: 94  VLTLS------------GAIFGWGRNKFGQLGLN--DENDRYVPNLLKSLRSQKIVYICC 139

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H   LT  G V                                      +T+G   Y
Sbjct: 140 GEDHTAALTKEGGV--------------------------------------FTFGAGGY 161

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS- 241
           GQ+G +NS +    P++V  L+   +  IACG  H+     S  R+Y+FG+G   QL + 
Sbjct: 162 GQLG-HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 220

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVL 301
             S  K+P  + G W           DS         VK+I+SGGD S    +   +   
Sbjct: 221 STSNRKSPFTVKGNWYPYNGQCLPDIDS----EEYFCVKRIFSGGDQSFSHYSSPQNCGP 276

Query: 302 SDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY------------LETV 349
            DDFR  NP  QI  VN                 E L Q  L Y            ++  
Sbjct: 277 PDDFRCPNPTKQIWTVN-----------------EALIQKWLSYPSGRFPVEIANEIDGT 319

Query: 350 FLSPGCMNGSFLQVENDEHFSCNSK 374
           F S GC+NGSFL V ND+H+   ++
Sbjct: 320 FSSSGCLNGSFLAVSNDDHYRTGTR 344



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN TI+++ FPLALYKK
Sbjct: 658 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNCTIVDLHFPLALYKK 713

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 714 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 754



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 316 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 373

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 374 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 423


>gi|10047261|dbj|BAB13419.1| KIAA1593 protein [Homo sapiens]
          Length = 953

 Score =  168 bits (425), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 156/291 (53%), Gaps = 47/291 (16%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 439  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 498

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +                       G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 499  VNEKM----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 536

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G   +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 537  GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 596

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 597  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 644

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ LIG
Sbjct: 645  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHLIG 695



 Score =  155 bits (393), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 163/385 (42%), Gaps = 88/385 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  AG +H  
Sbjct: 41  GYYHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSF 99

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           VLT +            G +F WG +  GQLGL   D+  + +P  +K L S  +V  C 
Sbjct: 100 VLTLS------------GAIFGWGRNKFGQLGLN--DENDRYVPNLLKSLRSQKIVYICC 145

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H   LT  G V                                      +T+G   Y
Sbjct: 146 GEDHTAALTKEGGV--------------------------------------FTFGAGGY 167

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS- 241
           GQ+G +NS +    P++V  L+   +  IACG  H+     S  R+Y+FG+G   QL + 
Sbjct: 168 GQLG-HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 226

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVL 301
             S  K+P  + G W           DS         VK+I+SGGD S    +   +   
Sbjct: 227 STSNRKSPFTVKGNWYPYNGQCLPDIDS----EEYFCVKRIFSGGDQSFSHYSSPQNCGP 282

Query: 302 SDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY------------LETV 349
            DDFR  NP  QI  VN                 E L Q  L Y            ++  
Sbjct: 283 PDDFRCPNPTKQIWTVN-----------------EALIQKWLSYPSGRFPVEIANEIDGT 325

Query: 350 FLSPGCMNGSFLQVENDEHFSCNSK 374
           F S GC+NGSFL V ND+H+   ++
Sbjct: 326 FSSSGCLNGSFLAVSNDDHYRTGTR 350



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN TI+++ FPLALYKK
Sbjct: 664 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNCTIVDLHFPLALYKK 719

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 720 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 760



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S GC+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 322 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 379

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 380 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 429


>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 909

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 191/389 (49%), Gaps = 43/389 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q         
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV-------- 142

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
               + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 143 ----SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQTSPQRVRSLEGIPLAQVAA 197

Query: 123 GYSHCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTIT 166
           G +H   L+ SG V                  +E+ C      +Q V      + HT + 
Sbjct: 198 GGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV- 256

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            L   G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+  L  S  
Sbjct: 257 -LTKSGGVFTFGAGSCGQLGHDSVNDEVN-PRRVLELMGSEVTQIACGRQHTLALVPSSG 314

Query: 227 RLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
            +YAFG G+  QL +  + + K P  + G W A    ++A  D         VVK+I+SG
Sbjct: 315 LIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSGQLSARADRFKYR----VVKQIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD + V  +   +   + DFR +N A     +N E +    +++ +  +  T++      
Sbjct: 371 GDQTFVLCSTYENSSPAVDFRTVNQAHYTNLINDETIAVWRQKLTEHNNANTVNG----- 425

Query: 346 LETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  +  S  C NGSFL+ + DEHF  + K
Sbjct: 426 VVQILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/285 (33%), Positives = 150/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+      YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQACPKYFMKLVTLYKSAVLYLLRGRKTFLIP---VLFNNYMTATLKLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRW------ISG 928
            +                        + V Y  FY+P+++++ DI+ DY  W      +  
Sbjct: 603  KV-----------------------KHVEYDKFYIPEISSLVDIQEDYLMWFLHQSGMKA 639

Query: 929  RPNGSTRDF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            RP+       LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIMQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+++V D +REL+ ++  D KKPLKV             F GEE  DAGGV 
Sbjct: 700  PFLVLHVRRNHLVGDALRELSIHSDIDLKKPLKV------------IFDGEEGVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 792



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 132/275 (48%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   ++    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     + T PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEK 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 823 SLEDLKELSPTEGRSLQELLDYPGEDIEETFCLNF 857



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMH----SQHSMILEQILN 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
 gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
 gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 189/386 (48%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q            
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV----------- 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 143 -SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQTSPQRVRSLEGIPLAQVAAGGA 200

Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT +  L 
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+  L  S   +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVN-PRRVLELMGSEVTQIACGRQHTLALVPSSGLIY 317

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    ++A  D         VVK+I+SGGD 
Sbjct: 318 AFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYR----VVKQIFSGGDQ 373

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +   +   + DFR +N       +N E +    +++ +  +  T++      +  
Sbjct: 374 TFVLCSTYENSSPAVDFRTVNQTHYTNLINDETIAVWRQKLTEHNNANTVNG-----VVQ 428

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/285 (33%), Positives = 150/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+      YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQACPKYFMKLVTLYKGAVLYLLRGRKTFLIP---VLFNNYMTATLKLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRW------ISG 928
            +                        + V Y  FY+P+++++ DI+ DY  W      +  
Sbjct: 603  KV-----------------------KHVEYDKFYIPEISSLVDIQEDYLMWFLHQSGMKA 639

Query: 929  RPNGSTRDF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            RP+       LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIMQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+++V D +REL+ ++  D KKPLKV             F GEE  DAGGV 
Sbjct: 700  PFLVLHVRRNHLVGDALRELSIHSDIDLKKPLKV------------IFDGEEGVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 792



 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 132/275 (48%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   ++    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     + T PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEK 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 823 SLEDLKELSPTEGRSLQELLDYPGEDIEETFCLNF 857



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRILFEKLMH----SQHSMILEQILN 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|198421655|ref|XP_002121487.1| PREDICTED: similar to hect domain and RLD 4 [Ciona intestinalis]
          Length = 1029

 Score =  167 bits (424), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/278 (36%), Positives = 144/278 (51%), Gaps = 44/278 (15%)

Query: 816  WYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNE 875
            WY  M   YF R I I+KQ +  +L +P  VD+   +      L F    L KLN++NN 
Sbjct: 535  WYRAMEPLYFARPIDIYKQSIKNVLDRPHSVDARVAETGVRSALDF----LGKLNTVNN- 589

Query: 876  TLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTR 935
              T  +                    V Y  FY+P++  + ++  DY RW+ G    S  
Sbjct: 590  --TGEVPI------------------VPYQRFYLPEITKLINLEDDYVRWLRGN---SQV 626

Query: 936  DFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMN--QTNFYLFLQTFNPHTL--NQYLEVEV 991
               CNYPF+ ++ AK++LL +D   QM  A +  Q      L +F+ H +     LE+EV
Sbjct: 627  VIFCNYPFLLNSVAKSSLLHIDAVWQMRAAYSEAQDRNMASLFSFSTHAMLETPVLELEV 686

Query: 992  SRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLL 1051
             R ++++D +  LA      FKKPL             VKF GEE +D GGVR+EF ML+
Sbjct: 687  RRSDLLQDALNRLAMVDVRSFKKPL------------MVKFDGEEGQDEGGVRKEFFMLI 734

Query: 1052 LKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            LKE+LDPKYGMF+ Y+E+  IWFS+   E + MYFL+G
Sbjct: 735  LKEVLDPKYGMFRFYDESHLIWFSDWELESEMMYFLVG 772



 Score =  123 bits (309), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 193/421 (45%), Gaps = 62/421 (14%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LA++D G+V+ WGG+   QLG    D      PK++K L++  +VQ   G+SH L L 
Sbjct: 88  HILAIDDKGKVYGWGGNDKDQLGW--TDGNCYPSPKKIKSLSN-KIVQVACGHSHSLFLG 144

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           S   LW +            G + +GQLG    DK S  + + +  L  +   Q  AG+ 
Sbjct: 145 SNGALWSA------------GSNNYGQLGF--GDKSSTEL-RPLISLKGIPFSQISAGFW 189

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNL----------------VQDSHTTITSLN 169
           H   +T SG V C  + +         V  N+                  + HT   +L+
Sbjct: 190 HSFCVTHSGAVFCWGRNDNGQLGLGDCVDRNVPVLLKALRSLSVKYICAGELHTAALTLD 249

Query: 170 SPGELYTWGNNEYGQMGINNSNTT---VTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
             G ++T+G+N++GQ+G  +S      V+ P+++  L+   +  IACGA H+        
Sbjct: 250 --GGVFTFGSNQFGQLGHGSSGPEPLPVSTPRKIFELMGNEVTQIACGAQHTVCYVGKTG 307

Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
            +Y FG  +  QL   PK  H   + +  P ++S +  ++   S       + VK+I +G
Sbjct: 308 NVYTFGNNNHSQLGYIPK--HPRSEFVPHP-LSSDMWTSSASTSSYPKLNSVFVKEIGAG 364

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
              S ++V+   +   S DFR +    QI  ++ E + + +  +E  K    +  D+  Y
Sbjct: 365 KTESFISVSTRPN---SSDFRRIPTHQQIFTLSDEFISKLQ-SLENTK----ITPDVANY 416

Query: 346 LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLSLINWFMKLHFSIFGQGFGCVCPT 405
           LET+  S  C+N SFL     +H+  ++   S+  +SL++  ++L FS   +   C C  
Sbjct: 417 LETIMGSQSCINASFLA---SDHYKTSN---SYHGISLMS--VRLRFSKLCK---CTCTD 465

Query: 406 V 406
           V
Sbjct: 466 V 466



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 48/103 (46%), Positives = 68/103 (66%), Gaps = 6/103 (5%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  +    Y+E+  IWFS+   E + M FL+G +CGLAIYN TII++ FPL LYKK
Sbjct: 741 PKYGMFRF----YDESHLIWFSDWELESEMMYFLVGLICGLAIYNDTIIDICFPLVLYKK 796

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREP--DLEDVFGITF 813
           +L EP L  DL +L PTL++S+  +L+Y+     +ED F + F
Sbjct: 797 LLGEPPLFTDLAELDPTLSRSMNHLLEYQSDVHSIEDTFCLNF 839



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 74/187 (39%), Gaps = 53/187 (28%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G WHS  +   G VF WG + +GQLGL   D   +++P  +K L S+SV   CAG  H 
Sbjct: 186 AGFWHSFCVTHSGAVFCWGRNDNGQLGL--GDCVDRNVPVLLKALRSLSVKYICAGELHT 243

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKK--SQSIPKRVKGLASVSVVQ 119
             LT   G            VFT+G +  GQLG  S+  +    S P+++  L    V Q
Sbjct: 244 AALTLDGG------------VFTFGSNQFGQLGHGSSGPEPLPVSTPRKIFELMGNEVTQ 291

Query: 120 ACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGN 179
              G  H                                     T+  +   G +YT+GN
Sbjct: 292 IACGAQH-------------------------------------TVCYVGKTGNVYTFGN 314

Query: 180 NEYGQMG 186
           N + Q+G
Sbjct: 315 NNHSQLG 321



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 55/209 (26%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           VF     T    G E+ +    +   +V  L +V +V    G SH L            A
Sbjct: 44  VFLLEDGTVHTFGAENDNIGHSAGSTKVSALETVHIVDIALGDSHIL------------A 91

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           ++D G+V+ WGG+   QLG    D      PK++K L++  +VQ   G+SH L L S+G 
Sbjct: 92  IDDKGKVYGWGGNDKDQLGW--TDGNCYPSPKKIKSLSN-KIVQVACGHSHSLFLGSNGA 148

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                                                 L++ G+N YGQ+G  + ++T  
Sbjct: 149 --------------------------------------LWSAGSNNYGQLGFGDKSSTEL 170

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKS 224
           +P  + SL  +P + I+ G  HSF ++ S
Sbjct: 171 RP--LISLKGIPFSQISAGFWHSFCVTHS 197



 Score = 46.6 bits (109), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 7/110 (6%)

Query: 417 YLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSN 476
           YLET+  S  C+N SFL     +H+  ++   G+ +   +  +  + +     V+S++  
Sbjct: 416 YLETIMGSQSCINASFLA---SDHYKTSNSYHGISLMSVRLRFSKLCKCTCTDVQSIM-- 470

Query: 477 LAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFA 526
             + +  + L+ S+  + PD E LR+F+ LP    F N   +  +  PFA
Sbjct: 471 --VKSMQSSLLPSIARSQPDIETLRVFVLLPECDLFTNSENYGKITFPFA 518


>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  167 bits (424), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 189/386 (48%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q            
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV----------- 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 143 -SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQTSPQRVRSLEGIPLAQVAAGGA 200

Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT +  L 
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+  L  S   +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVN-PRRVLELMGSEVTQIACGRQHTLALVPSSGLIY 317

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    ++A  D         VVK+I+SGGD 
Sbjct: 318 AFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYR----VVKQIFSGGDQ 373

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +   +   + DFR +N       +N E +    +++ +  +  T++      +  
Sbjct: 374 TFVLCSTYENSSPAVDFRTVNQTHYTNLINDETIAVWRQKLTEHNNANTVNG-----VVQ 428

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  + K
Sbjct: 429 ILSSAACWNGSFLKKKIDEHFKTSPK 454



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/285 (33%), Positives = 150/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+      YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQACPKYFMKLVTLYKGAVLYLLRGRKTFLIP---VLFNNYMTATLKLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRW------ISG 928
            +                        + V Y  FY+P+++++ DI+ DY  W      +  
Sbjct: 603  KV-----------------------KHVEYDKFYIPEISSLVDIQEDYLMWFLHQSGMKA 639

Query: 929  RPNGSTRDF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            RP+       LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIMQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+++V D +REL+ ++  D KKPLKV             F GEE  DAGGV 
Sbjct: 700  PFLVLHVRRNHLVGDALRELSIHSDIDLKKPLKV------------IFDGEEGVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 792



 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 132/275 (48%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   ++    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     + T PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEK 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 823 SLEDLKELSPTEGRSLQELLDYPGEDIEETFCLNF 857



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 429 ILSSAACWNGSFLKKKIDEHFKTSPKIPGIDLNSTRILFEKLMH----SQHSMILEQILN 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
            porcellus]
          Length = 1080

 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 166/344 (48%), Gaps = 88/344 (25%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 566  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLCKIGIPPSERRIFNSFLHTALKVLEILHR 625

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +                       G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 626  VNEKA----------------------GQIIQYDKFYIHEVQELTDIRNDYITWVQQQAY 663

Query: 932  GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            G                +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P
Sbjct: 664  GMDVSHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQVAIDQAHRQNVSSLFLP 723

Query: 981  --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               ++N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A 
Sbjct: 724  VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 771

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L           
Sbjct: 772  DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 820

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                          IG +CGLAIYN+T+
Sbjct: 821  ------------------------------IGVICGLAIYNFTI 834



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 188/420 (44%), Gaps = 67/420 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESAD------KKSQSIPK----RVKGLASVSVV 52
           G  H+LALND G+V+ WG D+ GQLGL  ++      +KS  +P     R+K     +  
Sbjct: 92  GEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRKSIFMPVDKNIRIKECKKTASR 151

Query: 53  QACAGYSHCLVLTSTTGLWHSLALN-DCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG 111
           ++    + C  L   + L  S  +     EVF WG + +GQLGL   D K Q+ P+ +K 
Sbjct: 152 KSWVS-TLCSELAPDSHLAESGQVAVSASEVFCWGQNKYGQLGL-GIDCKKQTSPQLIKS 209

Query: 112 LASVSVVQACAGYSHCLVLTSSGVV----------TCTHKENG------CGSDPSQGVQS 155
           L  +  +Q  AG +H  VLT SG +             + EN         S  SQ +  
Sbjct: 210 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQKIVY 269

Query: 156 NLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGA 215
               + HT   +L   G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG 
Sbjct: 270 ICCGEDHTA--ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGR 326

Query: 216 NHSFVLSKSVSRLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHS 274
            H+     S  R+Y+FG+G   QL +   S  K+P  + G W           DS     
Sbjct: 327 QHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPDLDS----E 382

Query: 275 GGLVVKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKS 334
               VK+I+SGGD S    +   +    DDFR  +P+ QI  VN                
Sbjct: 383 EYFCVKRIFSGGDQSFSHYSSPQNCGPPDDFRYPDPSKQIWTVN---------------- 426

Query: 335 DETLDQDLLLY------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
            E L Q  L Y            ++  F S  C+NGSFL V ND+H+   + +FS + ++
Sbjct: 427 -EALIQKWLSYPSGRFPVEIANEIDGTFSSCACLNGSFLAVSNDDHYRTGT-RFSGVDMN 484



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 791 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 846

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 847 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 887



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 128/280 (45%), Gaps = 40/280 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  ++ +   +P++    +    V    
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLLGSE-ECIRVPRK----SIFMPVDKNI 140

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITS--LNSPGELYTWGNN 180
               C    S      T             + S L  DSH   +     S  E++ WG N
Sbjct: 141 RIKECKKTASRKSWVST-------------LCSELAPDSHLAESGQVAVSASEVFCWGQN 187

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           +YGQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S   ++ +G     QL 
Sbjct: 188 KYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLG 246

Query: 241 -SPKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            + ++    P L+        V +  GED  + ++  GG+
Sbjct: 247 LNDENDRYVPYLLKSLRSQKIVYICCGEDHTAALTKEGGV 286



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++  F S  C+NGSFL V ND+H+   ++  GVDM   +  +  + + +   +   V+  
Sbjct: 449 IDGTFSSCACLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 506

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++ PD EALR +LTLP      +      + +PF  AL
Sbjct: 507 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIALPFGTAL 556



 Score = 43.9 bits (102), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 12/127 (9%)

Query: 85  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV-TCTHKEN 143
           WG  + GQLGL   D++    P++     +  V     G  H + +   G V TC   + 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 144 G-CGSDPSQGVQSNLVQ-DSHTTIT---------SLNSPGELYTWGNNEYGQMGINNSNT 192
           G  G + S+     +V  D+   +          +LN  G++Y WG +  GQ+G+  S  
Sbjct: 64  GQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEE 123

Query: 193 TVTKPQR 199
            +  P++
Sbjct: 124 CIRVPRK 130


>gi|301614873|ref|XP_002936912.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC4-like [Xenopus (Silurana) tropicalis]
          Length = 1034

 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/283 (34%), Positives = 152/283 (53%), Gaps = 39/283 (13%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ L+    F +++ ++K  +++LL+             F R L+  L+VL+ L+ 
Sbjct: 528  VLENWWSLLEPPLFLKVVQLYKDVVVHLLKLSKNGIPLTERRLFYRFLNTALRVLEILHR 587

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +                        + + Y  FY+ ++    DI+ DY  WI  + +
Sbjct: 588  VNEK----------------------AAQIIPYDKFYIHEVQDFVDIQNDYINWIKQQAS 625

Query: 932  GSTRD---FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHT--LNQY 986
            G   D    +C YPF+FDA+AKTTLL+ D  IQM+ A++  +    L    P T  ++  
Sbjct: 626  GMVADPPVTICTYPFVFDAQAKTTLLQTDAVIQMQMAVDNAHRQNNLSWLFPATESVDPC 685

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            L + V RDNIV D +  L +    D+KKP++V             F GEEA DAGGVR+E
Sbjct: 686  LILVVRRDNIVGDAMEVLRKTKNIDYKKPMRV------------IFFGEEAIDAGGVRKE 733

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            F +L+++E+LDPKYGMF+ YEE+R IWFS+ TFED +++ LIG
Sbjct: 734  FFLLIMRELLDPKYGMFRYYEESRLIWFSDKTFEDSDLFHLIG 776



 Score =  114 bits (286), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 174/398 (43%), Gaps = 60/398 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+VF+WG   +GQ+GL +A++  +        L  ++  + C  Y    
Sbjct: 93  GEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRXYTSILTFLAPXKQCNFY---- 148

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                  L      +   ++F+WG + +GQLGL   + K +  P+ +K L+ +      A
Sbjct: 149 -------LISFSFSSSDSDIFSWGQNQYGQLGL-GLEIKKECAPRHIKSLSGIPFAHIAA 200

Query: 123 GYSHCLVLTSSGVVT--CTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTW--- 177
           G  H   LT SG +     +K    G     G +  L     +    L   G +Y+W   
Sbjct: 201 GGGHSFALTISGAIFGWGRNKFGQLGLTDETGKKLFLSSLXSSRCIRLMV-GNMYSWSFW 259

Query: 178 --------GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
                   G   YGQ+G N++N  V  P++V  L+   +  IACG  H+     S  R+Y
Sbjct: 260 PEGGVFTFGAGGYGQLGHNSTNHEVN-PRKVFELMGSIVTQIACGRQHTLAFVPSSGRIY 318

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           +FG+G   QL +  +++ K+P  + G W+          +  V H  G   K I     H
Sbjct: 319 SFGLGGNGQLGTGSTINRKSPFTVKGNWLTY--------EDYVRHLPG--KKHI-----H 363

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKEC---EREVEQLKSDETLDQDLLLY 345
            I TV     GV S  F V     +      +++  C   ER      S E         
Sbjct: 364 CITTV----KGVFSMHFFVTQTKCEXXFQGHQKIIFCLIKERLNNFFNSSE--------- 410

Query: 346 LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLSL 383
           ++ VF S  C+NGSFL   N++H+  +S KFS + +++
Sbjct: 411 IDKVFSSAACLNGSFLVTSNNDHYMTSS-KFSGVDMNV 447



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YEE+R IWFS+ TFED ++  LIG +CGLAIYN+TII + FPLALYKK
Sbjct: 745 PKYGMFRY----YEESRLIWFSDKTFEDSDLFHLIGVVCGLAIYNFTIIELHFPLALYKK 800

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L+DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 801 LLKKKPSLEDLKELMPIIGRSMQQLLDYTEDDIEETFCLNF 841



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++ VF S  C+NGSFL   N++H+  +SK  GVDM + +     +    +  +   V+  
Sbjct: 411 IDKVFSSAACLNGSFLVTSNNDHYMTSSKFSGVDMNVARLLLHKLMDPSQPQIAQQVA-- 468

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++PPD E LR++L LP      +      L +PF  A+
Sbjct: 469 --ASLEKNLIPRLTSSPPDIECLRLYLILPECPPMADANNLTSLAIPFGTAI 518



 Score = 47.0 bits (110), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 30/137 (21%), Positives = 59/137 (43%), Gaps = 17/137 (12%)

Query: 85  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV--------- 135
           WG  + GQLGL   D++    P+R     + +V     G +H + +   G          
Sbjct: 4   WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSAHTVFVLDDGTXXXXXXXXX 63

Query: 136 ------VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINN 189
                      K    G+  +Q + +    ++HT   +LN  G++++WG+  YGQ+G++ 
Sbjct: 64  XXXXXXXXSRRKPEQVGALDAQIIVAVSCGEAHT--LALNDKGQVFSWGHAVYGQIGLST 121

Query: 190 SNTTVTKPQRVESLVNL 206
           +   +  P+   S++  
Sbjct: 122 AEEYIRVPRXYTSILTF 138


>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
 gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
          Length = 1015

 Score =  167 bits (422), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 128/392 (32%), Positives = 195/392 (49%), Gaps = 53/392 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLG--LESADKKSQSIPKRVKGLASVSVVQ-ACAGYS 59
           G +H+L +ND  +VF+WG D  GQLG  LE+    S+  P+ VK L+S+ +VQ AC G  
Sbjct: 92  GDYHNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSRR-PRMVKELSSLQIVQVACGGK- 149

Query: 60  HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ 119
                       HSLAL++ G +F+WG ++HGQLG+ S   K+Q  P+ +  L  +   Q
Sbjct: 150 ------------HSLALSNDGRIFSWGNNSHGQLGIGST--KNQPKPQELTSLTGIPFCQ 195

Query: 120 ACAGYSHCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQ------------DSHT 163
             AG SH  VL+ SG V      T  + G G    +   +++              + HT
Sbjct: 196 IVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHT 255

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            + +L+  G + T+G   YGQ+G +NSN     P++V  L+ L +  +ACG  H+    +
Sbjct: 256 AVLTLD--GGVLTFGAGSYGQLG-HNSNNHEALPRKVFELMGLEVTQLACGRMHTMAYVE 312

Query: 224 SVSRLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKI 282
           S  R+Y+FG+G   QL S  + +  TP  + GP++       AG++SL       VV+ I
Sbjct: 313 SSGRIYSFGLGGNGQLGSKGTTNCNTPITVDGPFVP-----FAGDNSLEEQC--YVVQAI 365

Query: 283 YSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDL 342
            +GGD +    +K        DFR      QIL ++ E +        Q+ S   L  D+
Sbjct: 366 TAGGDQAFALASKLQGTPKPLDFREAPRHRQILCLSNEIIDTW----SQVPSGAKLSPDI 421

Query: 343 LLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
              +  VF S  C+NGSFL   +  HF C+S+
Sbjct: 422 SRDIHKVFSSAACLNGSFL---HSNHFYCSSR 450



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 79/192 (41%), Positives = 123/192 (64%), Gaps = 16/192 (8%)

Query: 902  VAYTAFYMPDLATVCDIRIDYFRWIS---GRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQ 958
            V +  FY+ ++    DI+ DY  W+    G  N     + C++PF+FDA+AKT LL+ D 
Sbjct: 578  VPHEQFYISEINGTVDIKRDYLMWLQQNRGYNNLPADIYFCSFPFVFDAQAKTELLQTDA 637

Query: 959  RIQMEHAMNQTNFYLFLQTFNP-HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLK 1017
             +QM+ A+ +     F   F P   +N YL + VSR+N+V+DT+ +L + ++ D KKPLK
Sbjct: 638  FLQMQLAVEEVQARNFQSLFLPIDPVNPYLVLIVSRENLVQDTLNQLMKQSSPDLKKPLK 697

Query: 1018 VNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSED 1077
            V             F GEEA DAGG+++EF +L+++E++DPK+GMF+ YEET+S+WF + 
Sbjct: 698  V------------IFIGEEAIDAGGLKKEFFLLIIREVMDPKFGMFRYYEETQSVWFHDR 745

Query: 1078 TFEDQNMYFLIG 1089
            +FE+ +M+FLIG
Sbjct: 746  SFEESSMFFLIG 757



 Score =  110 bits (276), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 70/101 (69%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YEET+S+WF + +FE+ +M FLIG LCGLAIYN TII++ FPLALYKK
Sbjct: 726 PKFGMFRY----YEETQSVWFHDRSFEESSMFFLIGVLCGLAIYNSTIIDLHFPLALYKK 781

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           ++   + L DLK + P + + L+ +L Y E D EDVF + F
Sbjct: 782 LMKRNVTLDDLKQIQPDVGRGLEQLLGYNEDDFEDVFCLNF 822



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 21/215 (9%)

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV-TCTH 140
           +F WG   +G+LGL   ++     PK     A+ ++ +   G  H + + + G V TC  
Sbjct: 1   MFCWGAARNGELGLGGIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60

Query: 141 KENG-CGSDP------------SQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG- 186
            + G  G D             +Q +Q     D H  +  +N   ++++WG ++ GQ+G 
Sbjct: 61  NDYGQLGQDKGHKRPTVITALDTQSIQQVSCGDYHNLV--VNDKYQVFSWGYDDCGQLGH 118

Query: 187 -INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL--DSPK 243
            +        +P+ V+ L +L I  +ACG  HS  LS    R++++G  S  QL   S K
Sbjct: 119 TLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSND-GRIFSWGNNSHGQLGIGSTK 177

Query: 244 SVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLV 278
           +  K  +L     I     +  G  S V    G V
Sbjct: 178 NQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAV 212



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 7/105 (6%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           +  VF S  C+NGSFL   +  HF C+S+NPGVD+   +  +  +     E+V   V   
Sbjct: 425 IHKVFSSAACLNGSFL---HSNHFYCSSRNPGVDIGEARAAFYRLG----ETVNKDVLQT 477

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILH 522
              +    L+KSL  +PPD EALR++L LPL H F      + LH
Sbjct: 478 IYKSMTETLLKSLPQSPPDIEALRLYLLLPLMHFFDQGTCAQYLH 522


>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
          Length = 913

 Score =  167 bits (422), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 190/389 (48%), Gaps = 43/389 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q         
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV-------- 142

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
               + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 143 ----SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQTSPQRVRSLEGIPLAQVAA 197

Query: 123 GYSHCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTIT 166
           G +H   L+ SG V                  +E+ C      +Q V      + HT + 
Sbjct: 198 GGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV- 256

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            L   G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+  L  S  
Sbjct: 257 -LTKSGGVFTFGAGSCGQLGHDSVNDEVN-PRRVLELMGSEVTQIACGRQHTLALVPSSG 314

Query: 227 RLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
            +YAFG G+  QL +  + + K P  + G W A    ++A  D         VVK+I+SG
Sbjct: 315 LIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYR----VVKQIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD + V  +   +   + DFR +N       +N E +    +++ +  +  T++      
Sbjct: 371 GDQTFVLCSTYENSSPAVDFRTVNQTHYTNLINDETIAVWRQKLTEHNNANTVNG----- 425

Query: 346 LETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  +  S  C NGSFL+ + DEHF  + K
Sbjct: 426 VVQILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  139 bits (351), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 95/285 (33%), Positives = 149/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+      YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQACPKYFMKLVTLYKGAVLYLLRGRKTFLIP---VLFNNYMTATLKLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRW------ISG 928
            +                        + V Y  FY+P+++++ DI+ DY  W      +  
Sbjct: 603  KV-----------------------KHVEYDKFYIPEISSLVDIQEDYLMWFLHQSGMKA 639

Query: 929  RPNGSTRDF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            RP+       LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIMQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+++V D +REL+ ++  D KKPLKV             F GEE  DAGGV 
Sbjct: 700  PFLVLHVRRNHLVGDALRELSIHSDIDLKKPLKV------------IFDGEEGVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            + F +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 748  KVFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 792



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 132/275 (48%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   ++    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     + T PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEK 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLA+YN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAVYNSTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 823 SLEDLKELSPTEGRSLQELLDYPGEDIEETFCLNF 857



 Score = 60.1 bits (144), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRILFEKLMH----SQHSMILEQILN 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
          Length = 913

 Score =  166 bits (421), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 190/389 (48%), Gaps = 43/389 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q         
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV-------- 142

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
               + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 143 ----SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQTSPQRVRSLEGIPLAQVAA 197

Query: 123 GYSHCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTIT 166
           G +H   L+ SG V                  +E+ C      +Q V      + HT + 
Sbjct: 198 GGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV- 256

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            L   G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+  L  S  
Sbjct: 257 -LTKSGGVFTFGAGSCGQLGHDSVNDEVN-PRRVLELMGSEVTQIACGRQHTLALVPSSG 314

Query: 227 RLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
            +YAFG G+  QL +  + + K P  + G W A    ++A  D         VVK+I+SG
Sbjct: 315 LIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYR----VVKQIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GD + V  +   +   + DFR +N       +N E +    +++ +  +  T++      
Sbjct: 371 GDQTFVLCSTYENSSPAVDFRTVNQTHYTNLINDETIAVWRQKLTEHNNANTVNG----- 425

Query: 346 LETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  +  S  C NGSFL+ + DEHF  + K
Sbjct: 426 VVQILSSAACWNGSFLEKKIDEHFKTSPK 454



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/285 (33%), Positives = 150/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+      YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQACPKYFMKLVTLYKGAVLYLLRGRKTFLIP---VLFNNYMTATLKLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRW------ISG 928
            +                        + V Y  FY+P+++++ DI+ DY  W      +  
Sbjct: 603  KV-----------------------KHVEYDKFYIPEISSLVDIQEDYLMWFLHQSGMKA 639

Query: 929  RPNGSTRDF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            RP+       LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIMQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+++V D +REL+ ++  D KKPLKV             F GEE  DAGGV 
Sbjct: 700  PFLVLHVRRNHLVGDALRELSIHSDIDLKKPLKV------------IFDGEEGVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 792



 Score =  114 bits (286), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 132/275 (48%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   ++    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGVNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     + T PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEK 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 823 SLEDLKELSPTEGRSLQELLDYPGEDIEETFCLNF 857



 Score = 60.1 bits (144), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRILFEKLMH----SQHSMILEQILN 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 1053

 Score =  166 bits (419), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 103/282 (36%), Positives = 152/282 (53%), Gaps = 41/282 (14%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+       F+RL+ ++K+ ++YLL+   +    +    F   L   L++L+ L+S+N 
Sbjct: 548  NWWSRFEPVVFQRLVELYKEVVVYLLRMQKLGIPLSEQRIFTCFLDTSLKLLEILHSVNE 607

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
                                    G+ + Y  FY+ +L  + DIR DY  W   +     
Sbjct: 608  RA----------------------GQIIQYDKFYIHELDELIDIRNDYATWFQQQMFSVV 645

Query: 935  RD---FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQT---NFY-LFLQTFNPHTLNQYL 987
             D    LC YPF+FDA+AKT LL+ D  IQM+ A++Q    NF  LFL      ++N  L
Sbjct: 646  MDSQVTLCKYPFVFDAQAKTALLQTDAVIQMQMAVDQAQRQNFTSLFLSGGGVESVNPCL 705

Query: 988  EVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREF 1047
             + V R+N+V D++  L +    D+KKPLKV             F GEEA DAGGVR+EF
Sbjct: 706  ILIVRRENVVGDSMEVLRKSKNVDYKKPLKV------------IFVGEEAVDAGGVRKEF 753

Query: 1048 LMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             +L++KE+L PKYGMF+ +EE+R IWF+  TFED +++ LIG
Sbjct: 754  FLLIMKELLHPKYGMFRFHEESRLIWFACKTFEDIDLFHLIG 795



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/390 (32%), Positives = 188/390 (48%), Gaps = 43/390 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LALND G+VF WG  + GQLGL S  +    +P+ VK L+ V + Q   GY    
Sbjct: 92  GEAHTLALNDKGQVFAWGLGSDGQLGL-SIVEDCLRVPRTVKSLSEVHITQVACGY---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   WHSLAL   GE+F+WG + +GQLGL        S P+ ++ L  +   Q  A
Sbjct: 147 --------WHSLALARGGEIFSWGQNKYGQLGLGQQGACVCS-PQVIQSLQGIPFGQISA 197

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDP------------SQGVQSNLVQDSHTTIT 166
           G +H   LT SG +    +      G G +             SQ V      + HT   
Sbjct: 198 GGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G ++T+G   YGQ+G N++N  V  P++V  L+   ++ IACG  H+     S  
Sbjct: 256 ALTKEGGVFTFGAGGYGQLGHNSTNHEVN-PRKVFELMGSVVSQIACGRQHTLAFIPSSG 314

Query: 227 RLYAFGIGSAVQLDSPKSVHK-TPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           ++ +FG+G   QL +  + ++ +P  + G W A   A    E  +        VK+IY+G
Sbjct: 315 KIDSFGLGGNGQLGTRSTCNRISPTPVKGCWRAH--ADPCVELCISEAERSYCVKRIYAG 372

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKE-CEREVEQLKSDETLDQDLLL 344
           GD S      S D     D R+  PA QI  ++ E +++     + ++ ++ T + DL  
Sbjct: 373 GDQSFAHYALSEDDGPPLDVRITRPAGQIYTLSTELIQKWLNHGLGRIPAEITDEIDL-- 430

Query: 345 YLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
               VF S  C+NGSFL   N +H+S +SK
Sbjct: 431 ----VFSSASCLNGSFLSSSNPDHYSTSSK 456



 Score =  103 bits (257), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 121/278 (43%), Gaps = 59/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++ L + G V+T G +  GQLG E A KK    P++V  L + ++V    G +H  
Sbjct: 42  GRRHTVFLLEDGTVYTCGCNDLGQLGHEKARKK----PEQVVSLDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+VF WG  + GQLGL S  +    +P+ VK L+ V + Q   
Sbjct: 96  ----------TLALNDKGQVFAWGLGSDGQLGL-SIVEDCLRVPRTVKSLSEVHITQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L   G                                      E+++WG N+Y
Sbjct: 145 GYWHSLALARGG--------------------------------------EIFSWGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
           GQ+G+      V  PQ ++SL  +P   I+ G  HSF L+ S   ++ +G     QL   
Sbjct: 167 GQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLS-GAIFGWGRNKFGQLGLG 225

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
                + P L+        V +  GED  + ++  GG+
Sbjct: 226 DNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGV 263



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/102 (50%), Positives = 72/102 (70%), Gaps = 4/102 (3%)

Query: 712 YPKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYK 771
           +PK G+  +    +EE+R IWF+  TFED ++  LIG +CGLAIYN TI+ + FPLALYK
Sbjct: 763 HPKYGMFRF----HEESRLIWFACKTFEDIDLFHLIGVVCGLAIYNLTIVELNFPLALYK 818

Query: 772 KILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           K+L +   L+DLK+L P + +SLQ +LDY E DLE+ F + F
Sbjct: 819 KLLKKTPTLEDLKELMPDVGRSLQQLLDYTEDDLEETFCLNF 860



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 4/112 (3%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           ++ VF S  C+NGSFL   N +H+S +SK  GVD+   +  +  + + +   +  +++  
Sbjct: 428 IDLVFSSASCLNGSFLSSSNPDHYSTSSKCSGVDINTARLLFHKLIQTDHPQISQIIA-- 485

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
              +   +L+  L ++PPD EALR++LTLP      NP     L +PFA A+
Sbjct: 486 --ASLEKNLLPKLSSSPPDIEALRLYLTLPECPLLCNPNNFTTLTIPFAKAI 535


>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cricetulus griseus]
          Length = 631

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 188/386 (48%), Gaps = 43/386 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q            
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV----------- 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 143 -SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQTSPQRVRSLEGIPLAQVAAGGA 200

Query: 126 HCLVLTSSGVVTC--------------THKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT +  L 
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G    GQ+G  + N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHGSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    ++A  D         VVK+I+SGGD 
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYR----VVKQIFSGGDQ 373

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
           + V  +   +   + DFR +N       +N E L    +++ +  +  T++      +  
Sbjct: 374 TFVLCSTYENSSPAVDFRTVNQTHYTHLINDETLAIWRQKLSEHNNANTMNG-----VVQ 428

Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  S  C NGSFL+ + DEHF  +SK
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSSK 454



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 132/275 (48%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G ++ GQLG E    K    P+++  LA   +V    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGVNSKGQLGHEREGNK----PEQIGALADQHIVHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     + T PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEK 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 61.2 bits (147), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  +SK PG+D+   +  ++ +   +   +   + N    
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSSKIPGIDLNSTRVLFEKLMHSQHSVILEQILN---- 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
           [Xenopus laevis]
 gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
          Length = 1050

 Score =  164 bits (414), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 124/389 (31%), Positives = 186/389 (47%), Gaps = 43/389 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+  G +++WG    GQLG  + +  S+ IP+ +K L+   + Q   G  HCL
Sbjct: 92  GQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSR-IPRIIKKLSQQKIQQMSCGDDHCL 150

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                       AL D G++FTWG +THGQLGL +    SQS P++VK L  + + Q  A
Sbjct: 151 ------------ALGDDGQLFTWGQNTHGQLGLGNG-FISQSSPQKVKSLEGIPLAQVTA 197

Query: 123 GYSHCLVLTSSGVV--------------TCTHKENGCGSDPSQGVQSNLVQ--DSHTTIT 166
           G SH   L+ SG V                  KE  C   P +  +   +   + HT I 
Sbjct: 198 GGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKETPCHVKPLRTHKVVYISCGEEHTAI- 256

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            L   G L+T+G    GQ+G ++ +  +  P+RV  L+   ++ IACG  H+     S  
Sbjct: 257 -LTKAGGLFTFGAGGSGQLGHDSLHNEIN-PRRVLELMGSEVSQIACGRKHTLAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
            LYAFG G   QL +    + K P ++ G W +    +    D    +    +VK+I+SG
Sbjct: 315 TLYAFGCGDLGQLGTGHENNVKCPTVVKGKWASCSGQIPMHADCAAYN----IVKQIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           G+ + V  TK      +DDFR+ +       +N E +    ++V  L++  T   +L+  
Sbjct: 371 GNKAFVLCTKWESSERADDFRLCSHRNHTSLINDETIDAWRQKV--LENGHT---NLMNG 425

Query: 346 LETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           +     S  C NGSFL+  NDEHF  + K
Sbjct: 426 IVQTLSSLACWNGSFLEKRNDEHFKTSPK 454



 Score =  137 bits (344), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 164/350 (46%), Gaps = 104/350 (29%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDIT------FNRKLSFCLQVLQK 868
            NW+  +  +YF +LI ++K  ++YLL         NG  T      F   ++  L++L+K
Sbjct: 546  NWWAQVCPNYFLKLIALYKGAVVYLL---------NGRKTLLIPVLFTSYITAALKLLEK 596

Query: 869  LNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISG 928
            L+ +N +                        + V +  FY+P+++++ DI+ DY  W   
Sbjct: 597  LHKVNGKA-----------------------QHVEHNTFYIPEISSLVDIQEDYLMWFLN 633

Query: 929  RPNGSTRD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFN 979
                  R         LC+YPF+FDA+AKT +L+ D  +QM+ A+N  N      L T +
Sbjct: 634  EAGLKLRQSIMQDSVTLCSYPFVFDAQAKTKMLQTDAELQMQVAVNGANLQNVFTLLTLD 693

Query: 980  PHTL-NQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
               + N +L + V R ++V D +REL+ Y+  D KKPLKV             F GEEA 
Sbjct: 694  AMLVKNPFLVLHVRRTSLVADALRELSIYSDIDLKKPLKV------------IFDGEEAV 741

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            D GGV +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N               
Sbjct: 742  DDGGVTKEFFLLLLKELLNPIYGMFTVYQDSNLLWFSDICFVEHN--------------- 786

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV---RFP 1145
                           WF            LIG +CGLAIYN+TV    FP
Sbjct: 787  ---------------WFH-----------LIGIMCGLAIYNFTVVDLHFP 810



 Score =  100 bits (248), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 71/95 (74%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG +CGLAIYN+T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTVYQDSNLLWFSDICFVEHNWFHLIGIMCGLAIYNFTVVDLHFPLALYKKLLNVQP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D++++F + F
Sbjct: 823 TLEDLKELSPTEGRSLQELLDYPHDDVDEMFCLNF 857



 Score = 99.8 bits (247), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 126/275 (45%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+L L + G+V++ G +  GQLG         + P  V  LA   +     G SH     
Sbjct: 45  HTLFLMEDGQVYSCGWNGEGQLG----HSHEGTHPAPVATLAEEHIKHIACGQSH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+  G +++WG    GQLG  + +  S+ IP+ +K L+   + Q   G  
Sbjct: 96  -------SLALSLQGNLYSWGAGNDGQLGHATVEHYSR-IPRIIKKLSQQKIQQMSCGDD 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L               G D                       G+L+TWG N +GQ+
Sbjct: 148 HCLAL---------------GDD-----------------------GQLFTWGQNTHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+ N   + + PQ+V+SL  +P+A +  G +HSF LS S   ++ +G  SA QL  + + 
Sbjct: 170 GLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLS-GAVFGWGKNSAGQLGLNDEQ 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
           V +TP  +        V ++ GE+  ++++ +GGL
Sbjct: 229 VKETPCHVKPLRTHKVVYISCGEEHTAILTKAGGL 263



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 4/106 (3%)

Query: 424 SPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAILASH 483
           S  C NGSFL+  NDEHF  + K PG++M   +  ++ +  I    +   +    +    
Sbjct: 432 SLACWNGSFLEKRNDEHFKTSPKIPGINMYSIKVLFEKLMNIHHSRLLEQI----LKGFE 487

Query: 484 AHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           + L+  L + PPD EA+R+++ LP +    + + +  L +P A A+
Sbjct: 488 SFLIPQLSSCPPDVEAMRIYIILPEFPLLQDSKYYITLTLPLAMAI 533


>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
 gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
          Length = 1056

 Score =  163 bits (413), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 157/347 (45%), Gaps = 93/347 (26%)

Query: 813  FRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSL 872
             R W+  +   YF R+I +F++C+ YLL  P    +      +   L  C+  L  L+ +
Sbjct: 547  LRRWWSTLPSTYFSRVIQVFQECVKYLLTLPLPHFANEERQVY---LGMCMVALDNLHKV 603

Query: 873  NNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNG 932
            NNE+                      G  V +  F  P    V DIR DYF WI  +   
Sbjct: 604  NNES----------------------GDIVPFKQFTFPRTREV-DIRADYFNWIQNQKIN 640

Query: 933  STRDF--------LCNYPFIFDAKAKTTLLEMDQRIQMEHAM---NQTNFYLFLQTFNPH 981
                          C +PF+FDA AKT LL+ D  +QM+ A+   N+ N    L     +
Sbjct: 641  LKHQHSVVKNTFSFCRFPFVFDASAKTKLLQTDAVMQMQSAVDEVNRRNVQSLLSFVPVN 700

Query: 982  TLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAG 1041
             +N  L ++V RD+IV+DT+ ++   +  D KKPLKV             F  EEA DAG
Sbjct: 701  PVNPCLVIKVRRDSIVQDTLTQITTQSPYDLKKPLKV------------IFANEEAVDAG 748

Query: 1042 GVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKY 1101
            GV++EF +LLL EILDPKYGMF   E++++IWF++ TFE+  M+ L              
Sbjct: 749  GVKKEFFLLLLTEILDPKYGMFTYLEDSQTIWFNDLTFEESPMFLL-------------- 794

Query: 1102 SMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV---RFP 1145
                                       IG +CGLAIYN T+   RFP
Sbjct: 795  ---------------------------IGVICGLAIYNSTIFDLRFP 814



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 186/432 (43%), Gaps = 98/432 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+  L   G V+T G +  GQLG E    KS + P+ V  + + ++ +         
Sbjct: 43  GWNHTAFLCKDGTVYTCGSNEFGQLGQE----KSHTNPESVHAIETFTITKV-------- 90

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADK-KSQSIPKRVKGLASVSVVQAC 121
               T G  H++A++D G VF WG +++GQ+GL S  K K Q+IPK +KGLA +SVVQ  
Sbjct: 91  ----TCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIA 146

Query: 122 AGYSHCLVLTSSGVVTC----------THKENGCGSDPS-----QGVQSNLVQDSHTTIT 166
            G +H + LT SG + C            K +   S+P+      GV   L+        
Sbjct: 147 CGCNHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSF 206

Query: 167 SLNSPGELYTWGNNEYGQMGIN-------------------------------------- 188
           +L+S G L+ WG NEYGQ+G++                                      
Sbjct: 207 ALSSSGALFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGV 266

Query: 189 -------------NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
                        NSN     P++V  L+   +  IACG  H+  L  S  R+Y FG G 
Sbjct: 267 FTFGCGTSGQLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGG 326

Query: 236 AVQLDSPKSVH-KTPQLIHGPWIAS----PVAMTAGEDSLVSHSGGLVVKKIYSGGDHSI 290
             QL    + +  +P    GPW+ S     +   A  DS+V       V++I +GGDH  
Sbjct: 327 DGQLGLGVTNNCNSPMTAKGPWLRSNNIKSMLPEADGDSVV-----YTVRRIDAGGDHCF 381

Query: 291 VTVTKSSDGVLS-DDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETV 349
              +   D     +D R+  P+  IL ++     +  +    + SD +   D+   LE +
Sbjct: 382 AMASSYGDETDGPEDMRLPRPSQSILHLSVPVTMDLVKRA-TIASDLS---DVSEKLEII 437

Query: 350 FLSPGCMNGSFL 361
           F S  C+NGSFL
Sbjct: 438 FSSLACLNGSFL 449



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/96 (47%), Positives = 68/96 (70%), Gaps = 1/96 (1%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E++++IWF++ TFE+  M  LIG +CGLAIYN TI ++ FP  LYKK+L +  
Sbjct: 767 YGMFTYLEDSQTIWFNDLTFEESPMFLLIGVICGLAIYNSTIFDLRFPPVLYKKLLRKKP 826

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
            L D +   P++A++LQ +LDY + DLED FG+ F+
Sbjct: 827 NLDDFRGFQPSVARNLQYLLDYSDDDLEDTFGLNFQ 862


>gi|20072445|gb|AAH26855.1| Herc4 protein, partial [Mus musculus]
          Length = 460

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 133/249 (53%), Gaps = 58/249 (23%)

Query: 899  GRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDF---LCNYPFIFDAKAKTTLLE 955
            G+ + Y  FY+ ++  + DIR DY  W+  +  G   D    +C YPF+FDA+AKTTLL+
Sbjct: 19   GQLIQYDKFYIHEVQELIDIRNDYINWVQQQAYGVLADIPVTICTYPFVFDAQAKTTLLQ 78

Query: 956  MDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFK 1013
             D  +QM+ A++Q +       F P   ++N  L + V R+NIV D +  L +    D+K
Sbjct: 79   TDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYK 138

Query: 1014 KPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIW 1073
            KPLKV             F GE+A DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IW
Sbjct: 139  KPLKV------------IFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIW 186

Query: 1074 FSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLC 1133
            FS+ TFED +++ L                                         IG +C
Sbjct: 187  FSDKTFEDSDLFHL-----------------------------------------IGVIC 205

Query: 1134 GLAIYNYTV 1142
            GLAIYN+T+
Sbjct: 206  GLAIYNFTI 214



 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 171 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 226

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L     L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 227 LLKRKPSLDDLKELMPAVGRSMQQLLDYPEDDIEETFCLNF 267


>gi|119574651|gb|EAW54266.1| hect domain and RLD 4, isoform CRA_f [Homo sapiens]
          Length = 443

 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 84/196 (42%), Positives = 122/196 (62%), Gaps = 17/196 (8%)

Query: 899  GRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDF---LCNYPFIFDAKAKTTLLE 955
            G+ + Y  FY+ ++  + DIR DY  W+  +  G   D    +C YPF+FDA+AKTTLL+
Sbjct: 2    GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAYGMLADIPVTICTYPFVFDAQAKTTLLQ 61

Query: 956  MDQRIQMEHAMNQTNFYLFLQTFNP--HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFK 1013
             D  +QM+ A++Q +       F P   ++N  L + V R+NIV D +  L +    D+K
Sbjct: 62   TDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYK 121

Query: 1014 KPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIW 1073
            KPLKV             F GE+A DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IW
Sbjct: 122  KPLKV------------IFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIW 169

Query: 1074 FSEDTFEDQNMYFLIG 1089
            FS+ TFED +++ LIG
Sbjct: 170  FSDKTFEDSDLFHLIG 185



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN TI+++ FPLALYKK
Sbjct: 154 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNCTIVDLHFPLALYKK 209

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 210 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 250


>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
          Length = 1050

 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 172/373 (46%), Gaps = 64/373 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +   
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGA--- 200

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS AL+  G VF WG +  GQLGL  +D++ +  P  VK L +  VV    
Sbjct: 201 ---------HSFALSLSGAVFGWGMNNAGQLGL--SDEEDRESPCHVKLLRAQKVVYISC 249

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H  VLT SG V                                      +T+G    
Sbjct: 250 GEEHTAVLTKSGGV--------------------------------------FTFGAGSC 271

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +YAFG G+  QL + 
Sbjct: 272 GQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330

Query: 243 KSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVL 301
            + + K P  + G W A    ++A  D    H    +VK+I+SGGD + V  +K  +   
Sbjct: 331 HTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSGGDQTFVLCSKYENSSP 386

Query: 302 SDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSFL 361
           + DFR +N A     +N E +    +++ +  +  T++      +  +  S  C NGSFL
Sbjct: 387 AVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNANTING-----VVQILSSAACWNGSFL 441

Query: 362 QVENDEHFSCNSK 374
           + + DEHF  + K
Sbjct: 442 EKKIDEHFKTSPK 454



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 150/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 546  NWWSQVCPKYFTKLVNLYKGAVVYLLRGRKTFLIP---VLFNNYITAALRLLEKLYKVNL 602

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++++ DI+ DY  W   +     
Sbjct: 603  KV-----------------------KHVEYDTFYIPEISSLVDIQEDYLMWFLHQAGMKA 639

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 640  RPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 700  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 747

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 748  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 792



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 132/275 (48%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   +V    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADEHIVHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + ++ S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTEE-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEE 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGV 263



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 67/95 (70%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVQP 822

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP   +SLQ++LDY   D+E+ F + F
Sbjct: 823 GLEDLKELSPAEGRSLQELLDYPGEDIEETFCLNF 857



 Score = 60.1 bits (144), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 58/109 (53%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +   +   +   + N    
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHSVILEQILN---- 484

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533


>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
          Length = 1031

 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 176/353 (49%), Gaps = 38/353 (10%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q            
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV----------- 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH LAL   G+ FTWG ++HGQLGL   D  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 143 -SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKDFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT +  L 
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    ++A  D    H    +VK+I+SGGD 
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHRGQLSATADRFKYH----IVKQIFSGGDQ 373

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           + V  +K  +   + DFR++N A     +N E +   ++++ +  +  T+  D
Sbjct: 374 TFVLCSKYENSSPAVDFRIMNQAHYTSLINDETIAAWKQKLSEHNNANTIKID 426



 Score =  143 bits (361), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/278 (35%), Positives = 151/278 (54%), Gaps = 42/278 (15%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLLQ           + FN  ++  L++L+KL  +N 
Sbjct: 526  NWWSQVCPKYFMKLVNLYKDAVVYLLQGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 582

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++++ DI+ DY  W   +  G+ 
Sbjct: 583  KV-----------------------KHVEYDTFYIPEISSLVDIQEDYLMWFLHQA-GTD 618

Query: 935  RDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLNQYLEVEV 991
               LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    + +L + V
Sbjct: 619  AVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHV 678

Query: 992  SRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLL 1051
             R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV +EF +LL
Sbjct: 679  RRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVTKEFFLLL 726

Query: 1052 LKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            LKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 727  LKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 764



 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 130/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG      K    P+++  LA   +V    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHGREGNK----PEQIGALADQHIVHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEE 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/74 (50%), Positives = 53/74 (71%), Gaps = 1/74 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 735 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVNP 794

Query: 779 LLQDLKDLSPTLAK 792
            L+DLK+LSPT  +
Sbjct: 795 GLEDLKELSPTEGR 808



 Score = 46.6 bits (109), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 4/95 (4%)

Query: 435 VENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAILASHAHLVKSLWNTP 494
           ++ DEHF  + K PG+D+   +  ++ +   +   +   + N    +  + L+  L ++P
Sbjct: 423 IKIDEHFKTSPKIPGIDLNSTRILFEKLMNSQHSVILEQILN----SFESCLIPQLSSSP 478

Query: 495 PDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           PD EA+R++L LP +    + + +  L +P A A+
Sbjct: 479 PDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 513


>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Takifugu rubripes]
          Length = 1031

 Score =  159 bits (402), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 180/395 (45%), Gaps = 65/395 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+N+ G+VF WG    GQLGL + +   + IP+ +K L    + Q   G  HC+
Sbjct: 91  GQAHSLAVNEQGQVFAWGAGEEGQLGLGTTETAVR-IPRLIKRLCDHRIAQVMCGNQHCI 149

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                       AL+  G++FTWG +T GQLGL   +  S+  P+ +K LA + + +  A
Sbjct: 150 ------------ALSKDGQLFTWGQNTSGQLGLGKGEP-SKLFPQPLKSLAGIPLAKITA 196

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQD---------------------- 160
           G  H   L+ SG V       G G + +  +  N +QD                      
Sbjct: 197 GGDHSFALSLSGAVF------GWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGE 250

Query: 161 SHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
            HT   +L   G L+T+G+  +GQ+G + S      P+RV  L+   ++ I CG +H+  
Sbjct: 251 EHTA--ALTKDGGLFTFGDGSWGQLG-HGSTANELLPRRVLELMGTEVSQITCGRHHTLA 307

Query: 221 LSKSVSRLYAFGIGSAVQLDSPK-SVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVV 279
            + S   +YAFG  S  QL +   S  K+P  +   +++  +  T              V
Sbjct: 308 FAPSSGGVYAFGCNSHGQLGTGVLSADKSPYPLKTSFLSGSIHGT--------------V 353

Query: 280 KKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLD 339
            KI  GGDHS +  +   +    +DFRV+N +  I  +N+ERL     ++     D  + 
Sbjct: 354 TKITCGGDHSFLLYSNDQNSEYPEDFRVINISNAISPINYERLNSWRLKM-MCNKDSGVT 412

Query: 340 QDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
            D+ + L     S  C N SFL   +D HFS N K
Sbjct: 413 NDINIQLS----STACWNASFLDQSDDAHFSTNPK 443



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 163/346 (47%), Gaps = 97/346 (28%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  M D  F R++ ++K  +++LL+    +      +++       L++L+KL+ +N 
Sbjct: 535  NWWCFMDDSVFTRMVDMYKSIVVFLLRGGKTLLVP---VSYENHFVATLRLLEKLHKVNL 591

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRW-------IS 927
            +                        + V Y  FY+PD+ ++ DI+ DY +W       +S
Sbjct: 592  K-----------------------AQHVEYNHFYIPDITSMVDIQEDYLKWFLSKAQIVS 628

Query: 928  GRPN----GSTRDF----LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFY--LFLQT 977
              P         DF    LC YPF+ +A+AKTT+L+ D  +QM+ A++  N +    L T
Sbjct: 629  AHPARXHFSVQTDFPSVNLCAYPFLLNAQAKTTMLQTDAELQMQMAVSGANLHNVFMLLT 688

Query: 978  FNPH-TLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEE 1036
              P    N YL + V R+++V DT+REL  Y+  D KKPLKV             F GEE
Sbjct: 689  LEPQLARNPYLVLHVRRNHLVSDTLRELTSYSDVDLKKPLKV------------IFDGEE 736

Query: 1037 AEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCT 1096
            A DAGGV +EF +LLLKE++DP YGMF  + E+  +WFS+  F +Q              
Sbjct: 737  AVDAGGVTKEFFLLLLKELMDPVYGMFTFHTESNLLWFSDKCFVEQK------------- 783

Query: 1097 YISKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                             WF            LIG +CGLAIYN TV
Sbjct: 784  -----------------WFH-----------LIGIICGLAIYNSTV 801



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/95 (51%), Positives = 69/95 (72%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T + E+  +WFS+  F +Q    LIG +CGLAIYN T++++ FPLALYKK+LD   
Sbjct: 760 YGMFTFHTESNLLWFSDKCFVEQKWFHLIGIICGLAIYNSTVVDLHFPLALYKKLLDVSP 819

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT A+SLQ ++DY   D+E+ F +TF
Sbjct: 820 TLEDLKELSPTEARSLQQLMDYDREDVEEAFLLTF 854



 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 100/237 (42%), Gaps = 56/237 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+ L   G V+T G ++ GQLG      K    P+ V  L +  +     G +H  
Sbjct: 41  GGQHSVFLLHDGSVYTCGSNSCGQLG----HNKPGITPEFVGALDTQKITLVSCGQAH-- 94

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     SLA+N+ G+VF WG    GQLGL + +   + IP+ +K L    + Q   
Sbjct: 95  ----------SLAVNEQGQVFAWGAGEEGQLGLGTTETAVR-IPRLIKRLCDHRIAQVMC 143

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  HC+ L+  G                                      +L+TWG N  
Sbjct: 144 GNQHCIALSKDG--------------------------------------QLFTWGQNTS 165

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           GQ+G+     +   PQ ++SL  +P+A I  G +HSF LS S   ++ +G   A QL
Sbjct: 166 GQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLS-GAVFGWGKNKAGQL 221



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 4/106 (3%)

Query: 424 SPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAILASH 483
           S  C N SFL   +D HFS N K PG+D+   +  + T++        S +   A  +  
Sbjct: 421 STACWNASFLDQSDDAHFSTNPKIPGIDLNSVRMFFATLS----TPAFSALLEQATTSFE 476

Query: 484 AHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           + L+  L  +PPD EA+R++L L  Y    + + +  L +P A A+
Sbjct: 477 SVLIPQLPRSPPDVEAMRIYLILSEYPALQDSKNYIRLTIPLAMAI 522


>gi|332819953|ref|XP_517337.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Pan
           troglodytes]
          Length = 976

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 183/372 (49%), Gaps = 39/372 (10%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   ++    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
           HCL L +        +E+ C      +Q V      + HT +  L   G ++T+G    G
Sbjct: 148 HCLALAAD-------RESPCHVKLLRTQKVVYISCGEEHTAV--LTKSGGVFTFGAGSCG 198

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPK 243
           Q+G ++ N  V  P+RV  L+   +  IACG  H+     S   +YAFG G+  QL +  
Sbjct: 199 QLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGH 257

Query: 244 SVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVLS 302
           + + K P  + G W A    ++A  D    H    +VK+I+SGGD + V  +K  +   +
Sbjct: 258 TCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSGGDQTFVLCSKYENYSPA 313

Query: 303 DDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSFLQ 362
            DFR +N A     +N E +    +++ +  +  T++      +  +  S  C NGSFL+
Sbjct: 314 VDFRTMNQAHYTSLINDETIAVWRQKLSEHNNANTING-----VVQILSSAACWNGSFLE 368

Query: 363 VENDEHFSCNSK 374
            + DEHF  + K
Sbjct: 369 KKIDEHFKTSPK 380



 Score =  137 bits (345), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 149/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 472  NWWSQVCPKYFMKLVNLYKGAVLYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 528

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++ + DI+ DY  W   +     
Sbjct: 529  KV-----------------------KHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKA 565

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 566  RPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 625

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 626  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 673

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 674  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 718



 Score = 97.1 bits (240), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 689 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 748

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 749 GLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 783



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 355 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSMILEQILN 410

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 411 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 459


>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1049

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 184/391 (47%), Gaps = 43/391 (10%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+A+N+ G+VF WG    GQLGLE+A+   + IP+ +K L   S+ Q   G  HC 
Sbjct: 91  GRAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVR-IPRLLKKLCDHSISQVVCGNQHC- 148

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +AL+  G++FTWG ++ GQLGL   +    S P  VK LA + + Q  A
Sbjct: 149 -----------IALSRDGQLFTWGQNSSGQLGLGKGETSKLS-PSPVKSLAGIPLAQITA 196

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNL------------VQDSHTTIT 166
           G  HC  L+ SG V    K      G      + V  ++              D HT   
Sbjct: 197 GGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHT--A 254

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G L+T+G+   GQ+G  +SN  +  P+RV  L+   ++ I CG +H+     S  
Sbjct: 255 ALTKSGGLFTFGDGSRGQLGHGSSNNELL-PRRVMELMGTEVSQITCGRHHTLAFVPSSG 313

Query: 227 RLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGL--VVKKIY 283
            +YAFG  S  QL +      ++P  +   ++   + +  G+  L   +G L   V KI 
Sbjct: 314 TVYAFGCNSHGQLGTGILADLRSPHPVKNDFLT--LNLRKGKVYLRIDTGFLKYTVIKII 371

Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLL 343
            GGDHS +  +      + +DFRV N +  +  +N + L     ++    +D  + +D++
Sbjct: 372 CGGDHSFLMYSSEQCPEVPEDFRVFNVSKSLSPINHDCLNSWRLKL-LYNTDSNVTKDMI 430

Query: 344 LYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           ++L     S  C N SFL   +D HF  N K
Sbjct: 431 VHLS----STACWNASFLDQSDDAHFKTNPK 457



 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 160/334 (47%), Gaps = 85/334 (25%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+ ++    F R++ ++K  ++Y+L     V +    +         L++L+KL+ +N 
Sbjct: 549  NWWCVVDVGVFTRMVDMYKSIVVYMLTGGKTVPAP---VLHENYFMATLRLLEKLHKVNL 605

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                          V Y  FY+PD+ ++ DI+ DY +W   +    +
Sbjct: 606  K-----------------------AHHVEYNHFYIPDITSLVDIQEDYLKWFLSKAQIKS 642

Query: 935  R---DFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFY--LFLQTFNPH-TLNQYLE 988
                  LC +PFI +A+AKTT+L+ D  +QM+ A++  N +    L T  PH   N YL 
Sbjct: 643  NLPPVNLCAFPFILNAQAKTTMLQTDAELQMQMAVSGANLHNVFMLLTLEPHLARNPYLV 702

Query: 989  VEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFL 1048
            + V R+++V DT+REL  Y+  D KKPLKV             F GEEA DAGG+ +EF 
Sbjct: 703  LHVRRNHLVSDTLRELTVYSDVDLKKPLKV------------IFDGEEAVDAGGLTKEFF 750

Query: 1049 MLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEYE 1108
            +LLLKE++DP YGMF  Y+E+  +WFS+  F +QN                         
Sbjct: 751  LLLLKELMDPVYGMFTYYKESNLLWFSDKCFVEQN------------------------- 785

Query: 1109 ETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                 WF            LIG +CGLAIYN TV
Sbjct: 786  -----WFH-----------LIGIICGLAIYNSTV 803



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/95 (52%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+E+  +WFS+  F +QN   LIG +CGLAIYN T++++ FPLALYKK+LD   
Sbjct: 762 YGMFTYYKESNLLWFSDKCFVEQNWFHLIGIICGLAIYNSTVVDLHFPLALYKKLLDVSP 821

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+D K+LSPT A+SLQ +LDY   D+E  F + F
Sbjct: 822 SLEDFKELSPTEARSLQQLLDYEGRDVEGTFLLNF 856



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 104/237 (43%), Gaps = 56/237 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+L L   G V+T G ++ GQLG    DK   S P+ V  L +  +     G +H  
Sbjct: 41  GGQHTLFLLQDGSVYTCGSNSCGQLG---HDKAGNS-PELVGALDTQKITMVSCGRAH-- 94

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+N+ G+VF WG    GQLGLE+A+   + IP+ +K L   S+ Q   
Sbjct: 95  ----------SVAVNEQGQVFVWGAGDGGQLGLETAETAVR-IPRLLKKLCDHSISQVVC 143

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  HC+ L+  G                                      +L+TWG N  
Sbjct: 144 GNQHCIALSRDG--------------------------------------QLFTWGQNSS 165

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           GQ+G+    T+   P  V+SL  +P+A I  G +H F LS S   ++ +G   A QL
Sbjct: 166 GQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLS-GAVFGWGKNKAGQL 221


>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
          Length = 983

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 176/356 (49%), Gaps = 38/356 (10%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q         
Sbjct: 92  GESHSLALSDQGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV-------- 142

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
               + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 143 ----SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 197

Query: 123 GYSHCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTIT 166
           G +H   L+ SG V                  +E+ C      +Q V      + HT + 
Sbjct: 198 GGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV- 256

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            L   G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S  
Sbjct: 257 -LTKSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSG 314

Query: 227 RLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
            +YAFG G+  QL +  + + K P  + G W A    ++A  D    H    +VK+I+SG
Sbjct: 315 LIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSG 370

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           GD + V  +K  +   + DFR++N A     +N E +    +++ +  +  T+  D
Sbjct: 371 GDQTFVLCSKYENSSPAVDFRIMNQAHYTSLINDETIAVWRQKLSEHNNANTIKID 426



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/193 (41%), Positives = 116/193 (60%), Gaps = 16/193 (8%)

Query: 900  RKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQR 959
            + V Y  FY+P+++ + DI+ DY  W   +    T   LC+YPFIFDA+AKT +L+ D  
Sbjct: 546  KHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMDTVT-LCSYPFIFDAQAKTKMLQTDAE 604

Query: 960  IQMEHAMNQTNF--YLFLQTFNPH-TLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPL 1016
            +QM+ A+N  N      L T  P    + +L + V R+N+V D +REL+ ++  D KKPL
Sbjct: 605  LQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRNNLVGDALRELSIHSDIDLKKPL 664

Query: 1017 KVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSE 1076
            KV             F GEEA DAGGV +EF +LLLKE+L+P YGMF  Y+++  +WFS+
Sbjct: 665  KV------------IFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQDSNLLWFSD 712

Query: 1077 DTFEDQNMYFLIG 1089
              F + N + LIG
Sbjct: 713  TCFVEHNWFHLIG 725



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 131/275 (47%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   ++    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDQGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+     +   PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL  S + 
Sbjct: 170 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEK 228

Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
             ++P  +        V ++ GE+  ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263



 Score = 97.8 bits (242), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 696 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 755

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 756 SLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 790



 Score = 46.6 bits (109), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 51/95 (53%), Gaps = 4/95 (4%)

Query: 435 VENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAILASHAHLVKSLWNTP 494
           ++ DEHF  + K PG+D+   +  ++ +      S  S++    + +  + L+  L ++P
Sbjct: 423 IKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSMILEQILNSFESCLIPQLSSSP 478

Query: 495 PDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           PD EA+R++L LP +    + + +  L +P A A+
Sbjct: 479 PDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 513


>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
          Length = 1046

 Score =  156 bits (394), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 192/412 (46%), Gaps = 51/412 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+N+ G+VF WG    GQLGL +A++  + +P+ +K L    + Q   G  HC 
Sbjct: 92  GQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVR-VPRLIKKLCEHRISQVMCGNHHC- 149

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +AL+  G++F WG ++ GQLGL   +  + S P+ +K L  + + Q  A
Sbjct: 150 -----------IALSKDGQLFVWGENSSGQLGLGKGEPSTLS-PQPLKSLCGIPLTQISA 197

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNL------------VQDSHTTIT 166
           G  H   L+ SG V    K +    G   +  + V  ++              + HT   
Sbjct: 198 GGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHT--A 255

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G L+T+GN   GQ+G ++S      P+RV  L+   ++ IACG NH+     S  
Sbjct: 256 ALTKEGGLFTFGNGSKGQLG-HDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTG 314

Query: 227 RLYAFGIGSAVQLDSP-KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
            +YAFG  +  QL +  +   K+P  +       P+ +     +  + +    + KI+SG
Sbjct: 315 LIYAFGCNTQGQLGTGIRGSAKSPVPVSN---IQPLCI----GNAYTRTEHCTIAKIHSG 367

Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
           GDH+ + ++        DDFR+LN    I  +N E L     ++    SD ++  D++L 
Sbjct: 368 GDHNFLLLSTVEGLSCPDDFRILNTTKSIALINSESLDSWRMKLHD-NSDSSITNDIILL 426

Query: 346 LETVFLSPGCMNGSFLQVENDEHFSCNSK----KFSFIKLSLINWFMKLHFS 393
           L     S  C N SFL   +D HF  N K     F+ ++L L    MK  F+
Sbjct: 427 LS----STACWNASFLDQSDDGHFKTNPKVPGIDFNAVRL-LFETLMKPAFA 473



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/343 (32%), Positives = 160/343 (46%), Gaps = 99/343 (28%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGD-----ITFNRKLSFCLQVLQKL 869
            NW+ LM    F RL+ ++K  +++LL        T G      +      S  L++L+KL
Sbjct: 543  NWWSLMDCTVFTRLVEMYKSIVVFLL--------TGGKALLMPVFLESYTSAALRLLEKL 594

Query: 870  NSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGR 929
            + +N +                         +V Y  FY+PD+AT+ DI+ DY +W   +
Sbjct: 595  HKVNLKA-----------------------HRVEYNHFYIPDIATLVDIQEDYLKWFLRK 631

Query: 930  PNGSTR-------DFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFY--LFLQTFNP 980
             +   R         LC YPFI +A+AKTT+L+ D  +QM+ A++  N +    L T  P
Sbjct: 632  ADIKMRYPPVQGSVTLCAYPFILNAQAKTTVLQTDAELQMQMAVSGANLHNVFMLLTMEP 691

Query: 981  H-TLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAED 1039
                N +L + V R+++V D +REL  Y   D KKPLKV             F GEEA D
Sbjct: 692  LLARNPFLVLHVRRNHLVSDALRELTIYNDVDLKKPLKV------------IFDGEEAVD 739

Query: 1040 AGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYIS 1099
            AGGV +EF +LLLKE+++P YGMF +Y E+  +WFS+  F + N                
Sbjct: 740  AGGVTKEFFLLLLKELMNPIYGMFTQYSESNLLWFSDKCFVEHN---------------- 783

Query: 1100 KYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                          WF            LIG +CGLAIYN TV
Sbjct: 784  --------------WFH-----------LIGIICGLAIYNSTV 801



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 145/553 (26%), Positives = 231/553 (41%), Gaps = 90/553 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSL L   G V+T G ++ GQLG +    K  S P+ V  L +    Q  +G S   
Sbjct: 42  GNQHSLFLLHDGSVYTCGSNSCGQLGHD----KGGSRPELVGALDA----QKISGVS--- 90

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G  HSLA+N+ G+VF WG    GQLGL +A++  + +P+ +K L    + Q   
Sbjct: 91  -----CGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVR-VPRLIKKLCEHRISQVMC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG------SDPSQ----------GVQSNLVQDSHTTIT 166
           G  HC+ L+  G +     EN  G       +PS           G+    +        
Sbjct: 145 GNHHCIALSKDGQLF-VWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSF 203

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L+  G ++ WG N  GQ+G+N+       P  ++ L +  +  I+CG  H+  L+K   
Sbjct: 204 ALSFSGAVFGWGKNSAGQLGLNDEQDRAV-PCHIKFLRSQKVVYISCGEEHTAALTKE-G 261

Query: 227 RLYAFGIGSAVQL--DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSH--SGGLVVKKI 282
            L+ FG GS  QL  DS ++    P+ +          +  G +  ++   S GL    I
Sbjct: 262 GLFTFGNGSKGQLGHDSTRN-EPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGL----I 316

Query: 283 YSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDL 342
           Y+ G ++   +     G       V N     +   + R + C   + ++ S    D + 
Sbjct: 317 YAFGCNTQGQLGTGIRGSAKSPVPVSNIQPLCIGNAYTRTEHCT--IAKIHSGG--DHNF 372

Query: 343 LLYLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKL-SLINWFMKLHFSIFGQGFGC 401
           LL L TV           L   +D      +K  + I   SL +W MKLH +        
Sbjct: 373 LL-LSTV---------EGLSCPDDFRILNTTKSIALINSESLDSWRMKLHDN-------- 414

Query: 402 VCPTVLGDCVPKSWLYLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDT 461
              ++  D +         +  S  C N SFL   +D HF  N K PG+D    +  ++T
Sbjct: 415 SDSSITNDII--------LLLSSTACWNASFLDQSDDGHFKTNPKVPGIDFNAVRLLFET 466

Query: 462 I-----ARIERESVRSLVSNLAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPR 516
           +     AR+  +  +S  S          L+  L  +PPD EA+R++L L     F + +
Sbjct: 467 LMKPAFARLLEQITKSFES---------LLIPQLPCSPPDVEAMRIYLILSECPAFQDSK 517

Query: 517 QHEILHMPFAGAL 529
            +  L +P A A+
Sbjct: 518 NYITLTIPLAMAI 530



 Score = 94.4 bits (233), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 48/102 (47%), Positives = 70/102 (68%), Gaps = 5/102 (4%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T+Y E+  +WFS+  F + N   LIG +CGLAIYN T++++ FPL LYKK+L+   
Sbjct: 760 YGMFTQYSESNLLWFSDKCFVEHNWFHLIGIICGLAIYNSTVVDLHFPLVLYKKLLEISP 819

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF---RNWY 817
            L DLK+LSPT  +SLQ +L++ E D+E+ F + F   R +Y
Sbjct: 820 TLDDLKELSPTEGRSLQQLLEF-EGDVEETFCLNFAITREYY 860


>gi|410975214|ref|XP_003994029.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Felis
            catus]
          Length = 486

 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/280 (33%), Positives = 141/280 (50%), Gaps = 69/280 (24%)

Query: 879  SSISAGGRTVSNIRTPA---PHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTR 935
            S+++AG   +S            G+ + Y  FY+ ++  + DIR DY  W+  +  G   
Sbjct: 14   STVAAGDVRLSTAHDDELVNEKTGQIIQYDKFYIHEVQELIDIRNDYINWVQQQAYGMDV 73

Query: 936  DF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP--HT 982
            +            +C YPF+FDA+AKTTLL+ D  +QM+ A++Q +       F P   +
Sbjct: 74   NHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIES 133

Query: 983  LNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGG 1042
            +N  L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGG
Sbjct: 134  VNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGG 181

Query: 1043 VRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYS 1102
            VR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L               
Sbjct: 182  VRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL--------------- 226

Query: 1103 MFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                      IG +CGLAIYN+T+
Sbjct: 227  --------------------------IGVICGLAIYNFTI 240



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 197 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 252

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 253 LLKKKPSLDDLKELVPDVGRSMQQLLDYPEDDVEETFCLNF 293


>gi|344237346|gb|EGV93449.1| putative E3 ubiquitin-protein ligase HERC3 [Cricetulus griseus]
          Length = 461

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 169/373 (45%), Gaps = 64/373 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +   
Sbjct: 27  GNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQTSPQRVRSLEGIPLAQVAAGGA--- 82

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS AL+  G VF WG +  GQLGL  +D+K +  P  VK L +  VV    
Sbjct: 83  ---------HSFALSLSGAVFGWGMNNAGQLGL--SDEKDRESPCHVKLLRTQKVVYISC 131

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H  VLT SG V                                      +T+G    
Sbjct: 132 GEEHTAVLTKSGGV--------------------------------------FTFGAGSC 153

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G  + N  V  P+RV  L+   +  IACG  H+     S   +YAFG G+  QL + 
Sbjct: 154 GQLGHGSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 212

Query: 243 KSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVL 301
            + + K P  + G W A    ++A  D         VVK+I+SGGD + V  +   +   
Sbjct: 213 HTCNVKCPSPVKGYWAAHSGQLSARADRFKYR----VVKQIFSGGDQTFVLCSTYENSSP 268

Query: 302 SDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSFL 361
           + DFR +N       +N E L    +++ +  +  T++      +  +  S  C NGSFL
Sbjct: 269 AVDFRTVNQTHYTHLINDETLAIWRQKLSEHNNANTMNG-----VVQILSSAACWNGSFL 323

Query: 362 QVENDEHFSCNSK 374
           + + DEHF  +SK
Sbjct: 324 EKKIDEHFKTSSK 336



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  +SK PG+D+   +  ++ +   +   +   + N    
Sbjct: 311 ILSSAACWNGSFLEKKIDEHFKTSSKIPGIDLNSTRVLFEKLMHSQHSVILEQILN---- 366

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 367 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 415


>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1391

 Score =  152 bits (385), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 182/385 (47%), Gaps = 46/385 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LA++D  +V  WG +  GQ GL + D +++  P+ ++ LAS   V+ C G        
Sbjct: 438 HTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGS------- 490

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 HS+AL   G +F+WG +T+GQLG+ +        P  +  L  V +V+   G  
Sbjct: 491 -----LHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGF 545

Query: 126 HCLVLTSSGVV-----------TCTHKENGCGSDPSQGVQSNLVQ-----DSHTTITSLN 169
           H   LT SG V              +KEN       + ++S +V+       HT +  L 
Sbjct: 546 HSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDHTAM--LT 603

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           + G ++ +G    GQ+G + SN     P++V  L+   I  + CG +H+ VL  S  RLY
Sbjct: 604 ADGGVFLFGQGSEGQLG-HGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLY 662

Query: 230 AFGIGSAVQL--DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGD 287
           AFG G   QL  D  +S    PQ + GPW+  P + TA   S    S G VV+ IY+GG 
Sbjct: 663 AFGQGIHGQLGQDEARSC-SNPQRVPGPWV--PHSSTAKNSS----SKGRVVRCIYAGGH 715

Query: 288 HSIVTVTKSSDG-VLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYL 346
           H   T T ++D   L  DFR   P  Q   +    +K    E+     + +   ++    
Sbjct: 716 HCFSTATNAADNPELPLDFRDPTPYQQPTCLTEGLIK----ELSTFGPNVSPSPEVRKTA 771

Query: 347 ETVFLSPGCMNGSFLQVENDEHFSC 371
           E VF S  C+N SFL+ EN+ H+ C
Sbjct: 772 EVVFSSAACLNASFLK-ENNGHYCC 795



 Score =  150 bits (378), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 93/282 (32%), Positives = 146/282 (51%), Gaps = 46/282 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   +  R++ + K  +  +LQ          D++F   L+ C++VL KL+ +N+
Sbjct: 890  NWWSKLQPRHLNRILTVHKDGIQAILQVGSFRQLCPEDLSF---LNVCMRVLDKLSKVNH 946

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWIS---GRPN 931
                                    G  + Y  FY+ D++   D++  +  ++    G  +
Sbjct: 947  NH----------------------GEILPYYMFYITDISKYIDVQEHFLLFLQKTVGSTS 984

Query: 932  GSTRDF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAM---NQTNFYLFLQTFNPHTLNQYL 987
            G+   F  C+YPFIFD   KT LL +D  +QM+ A+    + N    L   +P  +N  L
Sbjct: 985  GNVSLFTFCDYPFIFDTNTKTQLLHIDALLQMKFAIEDVQRRNLQSMLSQIDP--VNPCL 1042

Query: 988  EVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREF 1047
             + + R NIV  TI ++++    DFKKPLKV             F GE+A DAGGVR+EF
Sbjct: 1043 IMCIQRKNIVPSTINQISRCHPADFKKPLKVG------------FVGEDAVDAGGVRKEF 1090

Query: 1048 LMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             ML+++EILDPKYGMF+ YE++  IWF+  +FED  M+ L+G
Sbjct: 1091 FMLIMREILDPKYGMFRFYEDSGKIWFNSKSFEDPIMFRLVG 1132



 Score =  139 bits (350), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 151/313 (48%), Gaps = 40/313 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LA++D G+V  WG +  GQ GL + D +++  P+ +K LAS   V+ C G        
Sbjct: 98  HTLAVSDRGQVLGWGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGS------- 150

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 HS+AL   G +F+WG +T+GQLG+ +        P  +  L  V +V+   G  
Sbjct: 151 -----LHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGF 205

Query: 126 HCLVLTSSGVV-----------TCTHKENGCGSDPSQGVQSNLVQ-----DSHTTITSLN 169
           H   LT SG V              +KEN       + ++S +V+       HT +  L 
Sbjct: 206 HSFALTISGSVFGWGKNDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAM--LT 263

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           + G ++ +G    GQ+G + SN     P++V  L+   I  + CG +H+ VL  S  RLY
Sbjct: 264 ADGGVFLFGQGSEGQLG-HGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLY 322

Query: 230 AFGIGSAVQL--DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGD 287
           AFG G   QL  D  +S    PQ + GPW+  P + T    S    S G VV+ IY+GG 
Sbjct: 323 AFGQGIHGQLGQDEARSC-SNPQRVPGPWV--PHSSTEKNSS----SKGRVVRCIYAGGH 375

Query: 288 HSIVTVTKSSDGV 300
           H   T T ++D +
Sbjct: 376 HCFSTATNAADDI 388



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 5/103 (4%)

Query: 713  PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
            PK G+  +    YE++  IWF+  +FED  M  L+G +CGLAIYN+ II++PFPLALYKK
Sbjct: 1101 PKYGMFRF----YEDSGKIWFNSKSFEDPIMFRLVGLVCGLAIYNHIIISLPFPLALYKK 1156

Query: 773  ILDEPILLQDLKDLSPTLAKSLQDILDYREPD-LEDVFGITFR 814
            +L     L+DL  L P +A  LQ +LDY + +   D F + F+
Sbjct: 1157 LLGRKTTLEDLSKLEPQVAHHLQALLDYEDGEGFRDAFPLVFQ 1199



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 11/97 (11%)

Query: 412 PKSWLYLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVR 471
           P+     E VF S  C+N SFL+ EN+ H+ C   N GVD+   +  +  +A       +
Sbjct: 765 PEVRKTAEVVFSSAACLNASFLK-ENNGHYCCGKSNHGVDLDTARKAFRHLAD------K 817

Query: 472 SLVSNLAILASH--AHLVKSLWNTPPDAEALRMFLTL 506
           +++  L ILAS+  A LV SL  +PPD EALR++L L
Sbjct: 818 NMI--LEILASNINASLVPSLPESPPDVEALRLYLLL 852


>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
            niloticus]
          Length = 1004

 Score =  152 bits (385), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 112/335 (33%), Positives = 161/335 (48%), Gaps = 88/335 (26%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +    F R++ ++K  ++++L     V      + +       L++L+KL+ +N 
Sbjct: 505  NWWCFVDGSVFTRMVDMYKSIVVFMLTGGKTVLVP---MFYENYFLATLRLLEKLHKVNL 561

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+PD+ ++ DI+ DY +W   +   S 
Sbjct: 562  KA-----------------------QHVEYNRFYIPDITSLVDIQEDYLKWFLSKAEIS- 597

Query: 935  RDF----LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFY--LFLQTFNPH-TLNQYL 987
             DF    LC YPFI +AKAKTT+L+ D  +QM+ A++  N +    L T  PH   N YL
Sbjct: 598  -DFPSVNLCAYPFILNAKAKTTMLQTDAELQMQMAVSGANLHNVFMLLTLEPHLARNPYL 656

Query: 988  EVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREF 1047
             + V R ++V DT+REL  Y+  D KKPLKV             F GEEA DAGGV +EF
Sbjct: 657  VLHVRRSHLVSDTLRELTMYSDVDLKKPLKV------------IFDGEEAVDAGGVTKEF 704

Query: 1048 LMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEY 1107
             +LLLKE++DP YGMF  Y+E+  +WFS+  F +QN                        
Sbjct: 705  FLLLLKELMDPVYGMFTHYKESNLLWFSDKCFVEQN------------------------ 740

Query: 1108 EETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                  WF            LIG +CGLAIYN TV
Sbjct: 741  ------WFH-----------LIGIICGLAIYNATV 758



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 169/388 (43%), Gaps = 81/388 (20%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+A+N+ G++F WG    GQLGL + +   + IP+ VK L    + Q   G  HC 
Sbjct: 91  GRGHSMAVNEQGQLFAWGAGDGGQLGLGTTETTVR-IPRLVKRLCDHRISQVMCGNQHC- 148

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +AL+  G++FTWG +T GQLGL   +  S+  P  +K LA + + Q  A
Sbjct: 149 -----------VALSRDGQLFTWGQNTSGQLGLGKGE-PSKLFPHPLKSLAGIPLAQITA 196

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNL------------VQDSHTTIT 166
           G  H   L+ SG V    K      G      + V  ++              D HT   
Sbjct: 197 GGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHT--A 254

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L   G L+T+G+  +GQ+G  ++N+ +  P+RV  L+   ++ IACG +H+     S  
Sbjct: 255 ALTKDGGLFTFGDGSWGQLGHGSTNSELL-PRRVLELMGTEVSQIACGRHHTLAFVPSSG 313

Query: 227 RLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
            +YAFG  S  QL +                                  G++       G
Sbjct: 314 VVYAFGCNSHGQLGT----------------------------------GIL-------G 332

Query: 287 DHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYL 346
           D       K+S  V S+DFRV+N    +  +N+E L     ++    +D ++  D+++ L
Sbjct: 333 DARSPFPVKTS--VPSEDFRVINIGKSLSPINYESLNSLRLKL-MYNTDSSVTNDVIVQL 389

Query: 347 ETVFLSPGCMNGSFLQVENDEHFSCNSK 374
                S  C N SFL   +D HF  N K
Sbjct: 390 S----STACWNASFLDQSDDTHFKTNPK 413



 Score =  103 bits (257), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 49/95 (51%), Positives = 69/95 (72%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+E+  +WFS+  F +QN   LIG +CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 717 YGMFTHYKESNLLWFSDKCFVEQNWFHLIGIICGLAIYNATVVDLHFPLALYKKLLEVSP 776

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+D K+LSPT A+SLQ +LDY   D+E+ F + F
Sbjct: 777 TLEDFKELSPTEARSLQQLLDYEGSDVEETFLLNF 811



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 31/219 (14%)

Query: 85  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKEN 143
           WG    GQLG+   +K     P+     +   + +   G  H + L   G V TC     
Sbjct: 4   WGNAKDGQLGI-GVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSNSC 62

Query: 144 GCGSDPSQGVQSNLVQDSHT-TIT----------SLNSPGELYTWGNNEYGQMGINNSNT 192
           G       G+   +V    T  IT          ++N  G+L+ WG  + GQ+G+  + T
Sbjct: 63  GQLGHDKAGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTET 122

Query: 193 TVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLI 252
           TV  P+ V+ L +  I+ + CG  H   LS+   +L+ +G  ++ QL   K   +  +L 
Sbjct: 123 TVRIPRLVKRLCDHRISQVMCGNQHCVALSRD-GQLFTWGQNTSGQLGLGKG--EPSKLF 179

Query: 253 HGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             P               +    G+ + +I +GGDHS  
Sbjct: 180 PHP---------------LKSLAGIPLAQITAGGDHSFA 203



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 4/106 (3%)

Query: 424 SPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAILASH 483
           S  C N SFL   +D HF  N K PG+D+   +  ++T+++       S +   A  +  
Sbjct: 391 STACWNASFLDQSDDTHFKTNPKIPGIDLNSVRMLFETLSK----PAFSELMEQATKSFE 446

Query: 484 AHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           + L+  L  +PPD EA+R++L L  Y    + + +  L +P A A+
Sbjct: 447 SLLIPQLPRSPPDVEAMRIYLILSEYPALQDSKNYVRLTIPLAMAI 492


>gi|297673959|ref|XP_002815008.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 3
           [Pongo abelii]
          Length = 932

 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 166/344 (48%), Gaps = 30/344 (8%)

Query: 48  SVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPK 107
           SV+V +     +   +L  + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+
Sbjct: 6   SVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGL-GKEFPSQASPQ 64

Query: 108 RVKGLASVSVVQACAGYSHCLVLTSSGVV--------------TCTHKENGCGSD--PSQ 151
           RV+ L  + + Q  AG +H   L+ SG V                  +E+ C      +Q
Sbjct: 65  RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 124

Query: 152 GVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALI 211
            V      + HT +  L   G ++T+G   YGQ+G ++ N  V  P+RV  L+   +  I
Sbjct: 125 KVVYISCGEEHTAV--LTKSGGVFTFGAGSYGQLGHDSMNDEVN-PRRVLELMGSEVTQI 181

Query: 212 ACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSL 270
           ACG  H+     S   +YAFG G+  QL +  + + K P  + G W A    ++A  D  
Sbjct: 182 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRF 241

Query: 271 VSHSGGLVVKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVE 330
             H    +VK+I+SGGD + V  +K  +   + DFR +N A     +N E +    +++ 
Sbjct: 242 KYH----IVKQIFSGGDQTFVLCSKYENYSPAVDFRTMNQAHYTSLINDETIAVWRQKLS 297

Query: 331 QLKSDETLDQDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  +  T++      +  +  S  C NGSFL+ + DEHF  + K
Sbjct: 298 EHNNANTING-----VVQILSSAACWNGSFLEKKIDEHFKTSPK 336



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 149/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 428  NWWSQVCPKYFMKLVNLYKGAVLYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 484

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++ + DI+ DY  W   +     
Sbjct: 485  KV-----------------------KHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKA 521

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 522  RPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 581

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 582  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 629

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 630  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 674



 Score = 97.1 bits (240), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 645 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 704

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 705 GLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 739



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 311 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSMILEQILN 366

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 367 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 415


>gi|47214261|emb|CAG01938.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1055

 Score =  148 bits (374), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 176/379 (46%), Gaps = 34/379 (8%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           M G  H +AL+  G++FTWG +T GQLGL   +  S+  P+ +K LA + + +  AG  H
Sbjct: 142 MCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEP-SKLFPQPLKSLAGIPLAKITAGGDH 200

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                       S AL+  G VF WG +  GQLGL   D + +++P  +K L S  VV  
Sbjct: 201 ------------SFALSLSGAVFGWGKNKAGQLGLN--DIQDRAVPCHIKFLRSQKVVHI 246

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITS----LNSPGELYT 176
             G  H   LT   + + +      G   S       +  SH+T  +    L   G L+T
Sbjct: 247 SCGDEHTAALTKVRIRSASQCFRTSGGRCSNPFFCQRIGCSHSTRVTILLWLFQDGGLFT 306

Query: 177 WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
           +G+  +GQ+G + S +    P+RV  L+   ++ I CG +H+   + S   +YAFG  S 
Sbjct: 307 FGDGSWGQLG-HGSTSNELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGVVYAFGGNSH 365

Query: 237 VQLDSPK-SVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTK 295
            QL + + S  K    +        + + +G +   + S    V KI  GGDHS +  + 
Sbjct: 366 GQLGTGELSAEKCLYPVK-------INLLSGNNHR-TDSKKYSVTKITCGGDHSFLLYSN 417

Query: 296 SSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGC 355
                  +DFRV+N    I  +N+ERL     ++     D T+  D+ + L     S  C
Sbjct: 418 EQSLEYPEDFRVINIGNSISPINYERLNSWRLKM-MCNKDSTVTNDINIQLS----STAC 472

Query: 356 MNGSFLQVENDEHFSCNSK 374
            N SFL   +D HFS N K
Sbjct: 473 WNASFLDQSDDAHFSTNPK 491



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 143/332 (43%), Gaps = 109/332 (32%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  + D  F R++ I+K  +++LL+    +      I++       L++L+KL+ +N 
Sbjct: 583  NWWCFVDDGVFTRMVDIYKSIVVFLLRGGKTLLLP---ISYENYFVATLRLLEKLHKVN- 638

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
                                A H    V Y  FY+PD+ ++ DI+ DY +W   +     
Sbjct: 639  ------------------LKAHH----VEYNHFYIPDITSMVDIQEDYLKWFLSK--AQI 674

Query: 935  RDF----LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVE 990
             DF    LC YPF+ +A+AKTT+L+ D  +QM+ A++  N +              LE +
Sbjct: 675  TDFPSVNLCAYPFLLNAQAKTTMLQTDAELQMQMAVSGANLHNVFMLLT-------LEPQ 727

Query: 991  VSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLML 1050
            ++R+                              YL   V F GEEA DAGGV +EF +L
Sbjct: 728  LARNP-----------------------------YLVLHVIFDGEEAVDAGGVTKEFFLL 758

Query: 1051 LLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEYEET 1110
            LLKE++DP YGMF  + E+  +WFS+  F +Q                            
Sbjct: 759  LLKELMDPIYGMFTFHNESNLLWFSDKCFVEQK--------------------------- 791

Query: 1111 RSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
               WF            LIG +CGLAIYN TV
Sbjct: 792  ---WFH-----------LIGIICGLAIYNSTV 809



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/95 (51%), Positives = 69/95 (72%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T + E+  +WFS+  F +Q    LIG +CGLAIYN T++++ FPLALYKK+LD   
Sbjct: 768 YGMFTFHNESNLLWFSDKCFVEQKWFHLIGIICGLAIYNSTVVDLHFPLALYKKLLDVSP 827

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT A+SLQ +LDY   D+E+ F ++F
Sbjct: 828 TLEDLKELSPTEARSLQQLLDYENEDVEETFLLSF 862



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 100/237 (42%), Gaps = 56/237 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+ L   G V+T G +  GQLG      K  + P+ V  L +  +     G +   
Sbjct: 41  GGQHSVFLLHDGSVYTCGSNGCGQLG----HNKPGTSPELVGALDTQRITLVSCGQA--- 93

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+A+N+ G+VF WG    GQLGL + +   + IP+ +K L    + Q   
Sbjct: 94  ---------HSMAVNEQGQVFAWGAGDGGQLGLGTTEAAVR-IPRLIKRLCDHRIAQVMC 143

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  HC+ L+                                        G+L+TWG N  
Sbjct: 144 GNQHCIALSKD--------------------------------------GQLFTWGQNTS 165

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           GQ+G+     +   PQ ++SL  +P+A I  G +HSF LS S   ++ +G   A QL
Sbjct: 166 GQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLS-GAVFGWGKNKAGQL 221



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 92/224 (41%), Gaps = 35/224 (15%)

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTH 140
           +  WG    GQLG+E  ++ S   P+     +   + +A  G  H + L   G V TC  
Sbjct: 1   MLCWGKAKDGQLGIE-VERNSMFEPRNCNVFSGRGLKEAVCGGQHSVFLLHDGSVYTC-- 57

Query: 141 KENGCG--SDPSQGVQSNLVQDSHTTITSL-----------NSPGELYTWGNNEYGQMGI 187
             NGCG       G    LV    T   +L           N  G+++ WG  + GQ+G+
Sbjct: 58  GSNGCGQLGHNKPGTSPELVGALDTQRITLVSCGQAHSMAVNEQGQVFAWGAGDGGQLGL 117

Query: 188 NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK 247
             +   V  P+ ++ L +  IA + CG  H   LSK   +L+ +G  ++ QL   K   +
Sbjct: 118 GTTEAAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKD-GQLFTWGQNTSGQLGLGKG--E 174

Query: 248 TPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             +L   P               +    G+ + KI +GGDHS  
Sbjct: 175 PSKLFPQP---------------LKSLAGIPLAKITAGGDHSFA 203



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 4/106 (3%)

Query: 424 SPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAILASH 483
           S  C N SFL   +D HFS N K PG+D+   +  + T++        S +   A  +  
Sbjct: 469 STACWNASFLDQSDDAHFSTNPKIPGIDLNSVRMFFATLS----TPAFSALLEQATKSFE 524

Query: 484 AHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           + L+  L  +PPD EA+R++L L  Y    + + +  L +P A A+
Sbjct: 525 SVLIPQLPRSPPDVEAMRIYLILSEYPALQDTKNYIRLTIPLAMAI 570


>gi|402869930|ref|XP_003898996.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Papio anubis]
          Length = 932

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 165/344 (47%), Gaps = 30/344 (8%)

Query: 48  SVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPK 107
           SV+V +     +   +L  + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+
Sbjct: 6   SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQ 64

Query: 108 RVKGLASVSVVQACAGYSHCLVLTSSGVV--------------TCTHKENGCGSD--PSQ 151
           RV+ L  + + Q  AG +H   L+ SG V                  +E+ C      +Q
Sbjct: 65  RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 124

Query: 152 GVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALI 211
            V      + HT +  L   G ++T+G    GQ+G ++ N  V  P+RV  L+   +  I
Sbjct: 125 KVVYISCGEEHTAV--LTKSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQI 181

Query: 212 ACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSL 270
           ACG  H+     S   +YAFG G+  QL +  + + K P  + G W A    ++A  D  
Sbjct: 182 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRF 241

Query: 271 VSHSGGLVVKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVE 330
             H    +VK+I+SGGD + V  +K  +   + DFR +N A     +N E +    +++ 
Sbjct: 242 KYH----IVKQIFSGGDQTFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLS 297

Query: 331 QLKSDETLDQDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  +  T++      +  +  S  C NGSFL+ + DEHF  + K
Sbjct: 298 EHNNANTING-----VVQILSSAACWNGSFLEKKIDEHFKTSPK 336



 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 150/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 428  NWWSQVCPKYFMKLVNLYKGAVLYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 484

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++++ DI+ DY  W   +     
Sbjct: 485  KV-----------------------KHVEYDTFYIPEISSLVDIQEDYLMWFLHQAGMKA 521

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 522  RPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 581

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 582  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 629

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 630  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 674



 Score = 97.1 bits (240), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 645 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 704

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 705 GLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 739



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 311 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSMILEQILN 366

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 367 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 415


>gi|332233512|ref|XP_003265946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Nomascus leucogenys]
          Length = 932

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 165/344 (47%), Gaps = 30/344 (8%)

Query: 48  SVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPK 107
           SV+V +     +   +L  + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+
Sbjct: 6   SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQ 64

Query: 108 RVKGLASVSVVQACAGYSHCLVLTSSGVV--------------TCTHKENGCGSD--PSQ 151
           RV+ L  + + Q  AG +H   L+ SG V                  +E+ C      +Q
Sbjct: 65  RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 124

Query: 152 GVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALI 211
            V      + HT +  L   G ++T+G    GQ+G ++ N  V  P+RV  L+   +  I
Sbjct: 125 KVVYISCGEEHTAV--LTKSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQI 181

Query: 212 ACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSL 270
           ACG  H+     S   +YAFG G+  QL +  + + K P  + G W A    ++A  D  
Sbjct: 182 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRF 241

Query: 271 VSHSGGLVVKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVE 330
             H    +VK+I+SGGD + V  +K  +   + DFR +N A     +N E +    +++ 
Sbjct: 242 KYH----IVKQIFSGGDQTFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLS 297

Query: 331 QLKSDETLDQDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  +  T++      +  +  S  C NGSFL+ + DEHF  + K
Sbjct: 298 EHSNANTING-----VVQILSSAACWNGSFLEKKIDEHFKTSPK 336



 Score =  137 bits (345), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 149/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 428  NWWSQVCPKYFMKLVNLYKGAVLYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 484

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++ + DI+ DY  W   +     
Sbjct: 485  KV-----------------------KHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKA 521

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 522  RPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 581

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 582  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 629

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 630  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 674



 Score = 97.1 bits (240), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 645 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 704

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 705 GLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 739



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 311 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSMILEQILN 366

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 367 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 415


>gi|410957218|ref|XP_003985228.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Felis catus]
          Length = 932

 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 165/344 (47%), Gaps = 30/344 (8%)

Query: 48  SVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPK 107
           SV+V +     +   +L  + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+
Sbjct: 6   SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQ 64

Query: 108 RVKGLASVSVVQACAGYSHCLVLTSSGVV--------------TCTHKENGCGSD--PSQ 151
           RV+ L  + + Q  AG +H   L+ SG V                  +E+ C      +Q
Sbjct: 65  RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQ 124

Query: 152 GVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALI 211
            V      + HT +  L   G ++T+G    GQ+G ++ N  V  P+RV  L+   +  I
Sbjct: 125 KVVYISCGEEHTAV--LTKSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQI 181

Query: 212 ACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSL 270
           ACG  H+     S   +YAFG G+  QL +  + + K P  + G W A    ++A  D  
Sbjct: 182 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRF 241

Query: 271 VSHSGGLVVKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVE 330
             H    +VK+I+SGGD + V  +K  +   + DFR +N A     +N E +    +++ 
Sbjct: 242 KYH----IVKQIFSGGDQTFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLS 297

Query: 331 QLKSDETLDQDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  +  T++      +  +  S  C NGSFL+ + DEHF  + K
Sbjct: 298 EHNNANTING-----VVQILSSAACWNGSFLEKKIDEHFKTSPK 336



 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 150/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 428  NWWSQVCPKYFMKLVNLYKGAVVYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 484

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++++ DI+ DY  W   +     
Sbjct: 485  KV-----------------------KHVEYDTFYIPEISSLVDIQEDYLMWFLHQAGMKA 521

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 522  RPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 581

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 582  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 629

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 630  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 674



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 645 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 704

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 705 GLEDLKELSPTEGRSLQELLDYPGEDIEETFCLNF 739



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 311 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLM----SSQHSMILEQILN 366

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 367 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 415


>gi|410110896|ref|NP_001258531.1| probable E3 ubiquitin-protein ligase HERC3 isoform 2 [Homo sapiens]
 gi|397480081|ref|XP_003811324.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pan paniscus]
 gi|426344935|ref|XP_004039159.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Gorilla gorilla gorilla]
 gi|194382994|dbj|BAG59053.1| unnamed protein product [Homo sapiens]
          Length = 932

 Score =  146 bits (369), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 165/344 (47%), Gaps = 30/344 (8%)

Query: 48  SVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPK 107
           SV+V +     +   +L  + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+
Sbjct: 6   SVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQ 64

Query: 108 RVKGLASVSVVQACAGYSHCLVLTSSGVV--------------TCTHKENGCGSD--PSQ 151
           RV+ L  + + Q  AG +H   L+ SG V                  +E+ C      +Q
Sbjct: 65  RVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ 124

Query: 152 GVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALI 211
            V      + HT +  L   G ++T+G    GQ+G ++ N  V  P+RV  L+   +  I
Sbjct: 125 KVVYISCGEEHTAV--LTKSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQI 181

Query: 212 ACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSL 270
           ACG  H+     S   +YAFG G+  QL +  + + K P  + G W A    ++A  D  
Sbjct: 182 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRF 241

Query: 271 VSHSGGLVVKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVE 330
             H    +VK+I+SGGD + V  +K  +   + DFR +N A     +N E +    +++ 
Sbjct: 242 KYH----IVKQIFSGGDQTFVLCSKYENYSPAVDFRTMNQAHYTSLINDETIAVWRQKLS 297

Query: 331 QLKSDETLDQDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           +  +  T++      +  +  S  C NGSFL+ + DEHF  + K
Sbjct: 298 EHNNANTING-----VVQILSSAACWNGSFLEKKIDEHFKTSPK 336



 Score =  137 bits (345), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 149/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 428  NWWSQVCPKYFMKLVNLYKGAVLYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 484

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++ + DI+ DY  W   +     
Sbjct: 485  KV-----------------------KHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKA 521

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 522  RPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 581

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 582  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 629

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 630  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 674



 Score = 97.1 bits (240), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 645 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 704

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 705 GLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 739



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 311 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSMILEQILN 366

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 367 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 415


>gi|39104479|dbj|BAC65474.3| mKIAA0032 protein [Mus musculus]
          Length = 938

 Score =  146 bits (368), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 134/522 (25%), Positives = 220/522 (42%), Gaps = 121/522 (23%)

Query: 25  GQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFT 84
           GQLGL + +  S ++P+ ++ L   +++Q             + G WH LAL   G+ FT
Sbjct: 4   GQLGLMTTED-SVAVPRLIQKLNQQTILQV------------SCGNWHCLALAADGQFFT 50

Query: 85  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV-------- 136
           WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +H   L+ SG V        
Sbjct: 51  WGKNSHGQLGL-GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 109

Query: 137 ------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGIN 188
                     +E+ C      +Q V      + HT +  L   G ++T+G    GQ+G +
Sbjct: 110 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV--LTKSGGVFTFGAGSCGQLGHD 167

Query: 189 NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH-K 247
           + N  V  P+RV  L+   +  IACG  H+  L  S   +YAFG G+  QL +  + + K
Sbjct: 168 SVNDEVN-PRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVK 226

Query: 248 TPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVLSDDFRV 307
            P  + G W A    ++A  D         VVK+I+SGGD + V         L   +  
Sbjct: 227 CPSPVKGHWAAHSSQLSARADRFKYR----VVKQIFSGGDQTFV---------LCSTYEN 273

Query: 308 LNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSFLQVENDE 367
            +PA     VN       +     L +DET+                    +  + +  E
Sbjct: 274 SSPAVDFRTVN-------QTHYTNLINDETI--------------------AVWRQKLTE 306

Query: 368 HFSCNSKKFSFIKLSLINWFMKLHFSIFGQGFGCVCPTVLGDCVPKSWLYLETVFLSPGC 427
           H + N+ K+ F+ L         HF                                  C
Sbjct: 307 HNNANTVKYEFVCL---------HF----------------------------------C 323

Query: 428 MNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAILASHAHLV 487
              S L+ + DEHF  + K PG+D+   +  ++ +      S  S++    + +  + L+
Sbjct: 324 FFQSMLEKKIDEHFKTSPKIPGIDLNSTRILFEKLMH----SQHSMILEQILNSFESCLI 379

Query: 488 KSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
             L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 380 PQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 421



 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/285 (33%), Positives = 150/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+      YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 434  NWWSQACPKYFMKLVTLYKGAVLYLLRGRKTFLIP---VLFNNYMTATLKLLEKLYKVNL 490

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRW------ISG 928
            +                        + V Y  FY+P+++++ DI+ DY  W      +  
Sbjct: 491  KV-----------------------KHVEYDKFYIPEISSLVDIQEDYLMWFLHQSGMKA 527

Query: 929  RPNGSTRDF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            RP+       LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 528  RPSIMQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 587

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+++V D +REL+ ++  D KKPLKV             F GEE  DAGGV 
Sbjct: 588  PFLVLHVRRNHLVGDALRELSIHSDIDLKKPLKV------------IFDGEEGVDAGGVT 635

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 636  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 680



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 651 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 710

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 711 SLEDLKELSPTEGRSLQELLDYPGEDIEETFCLNF 745


>gi|449665602|ref|XP_002165309.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
            [Hydra magnipapillata]
          Length = 731

 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/189 (41%), Positives = 108/189 (57%), Gaps = 21/189 (11%)

Query: 901  KVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRI 960
            K+ + AFY+ DL     I+ D+  W+   PN       C YPFI D K K  LL ++   
Sbjct: 409  KIPFNAFYIEDLTAKIPIKDDFLNWLQ-YPNVFA---FCQYPFILDIKIKVDLLMIESEF 464

Query: 961  QMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVND 1020
            Q   A+ QT F       NP      L +++ R +IVEDT+ ++   +T + KKPLKV  
Sbjct: 465  QRNAAIAQTLFCAESSLLNP-----ILILDIRRSHIVEDTLSQILSLSTIELKKPLKV-- 517

Query: 1021 TSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFE 1080
                      +FRGEEAEDAGGV++EF +LL+KEILDPKYGMF  Y E++ +WF   +FE
Sbjct: 518  ----------RFRGEEAEDAGGVKKEFFLLLMKEILDPKYGMFDFYTESQVVWFKRKSFE 567

Query: 1081 DQNMYFLIG 1089
            D +MY  +G
Sbjct: 568  DADMYMFVG 576



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 102/226 (45%), Gaps = 54/226 (23%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
           G VF+WG +  GQ+G+ S   K  S P+ V+ L++  ++Q CAG  H           HS
Sbjct: 85  GHVFSWGSNEFGQVGINSKFHKYVS-PQLVRDLSNCPIIQICAG-GH-----------HS 131

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
           LAL   G +F WG ++ GQLGL   D++ +  P +++ +    V     G  H ++LTS+
Sbjct: 132 LALTISGTIFAWGKNSFGQLGL--GDQQDRLFPTKIQSMNGKHVRYISCGEEHSVLLTSA 189

Query: 134 GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
           G V       GCG                       S G+L   G+NE+    I      
Sbjct: 190 GRVYTF----GCG-----------------------SSGQL---GHNEFEDQFI------ 213

Query: 194 VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
              P+ V  L+  P+  IACG  H+       ++LY+FG+    QL
Sbjct: 214 ---PKMVVDLMGTPVTQIACGRKHTLAHVMKGNKLYSFGLNVKGQL 256



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 65/96 (67%), Gaps = 1/96 (1%)

Query: 720 YGITE-YEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ + Y E++ +WF   +FED +M   +G +CGLAIYN T+I+ PFPL LYKK+L + I
Sbjct: 547 YGMFDFYTESQVVWFKRKSFEDADMYMFVGMICGLAIYNSTMIDFPFPLCLYKKLLKKKI 606

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
            L D + +   +AK+LQ +LDY   D +DVF + F+
Sbjct: 607 NLDDFRGIQHDVAKNLQYLLDYDGDDFKDVFEMNFQ 642



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 21/164 (12%)

Query: 82  VFTWGGDTHGQLGLESADKKSQ------SIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +++WG + + QLG ++  +K +      + P  +    S  + +   G++H L L S G+
Sbjct: 3   MYSWGCNAYNQLGFKNLQEKDENEPIDNTFPTPILVNTSFCIEKIICGWNHTLFL-SGGL 61

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
           V  +    G   D   G+      + +T +      G +++WG+NE+GQ+GIN+      
Sbjct: 62  VYAS----GLNYDGELGIS-----NENTEVPD----GHVFSWGSNEFGQVGINSKFHKYV 108

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
            PQ V  L N PI  I  G +HS  L+ S   ++A+G  S  QL
Sbjct: 109 SPQLVRDLSNCPIIQICAGGHHSLALTIS-GTIFAWGKNSFGQL 151



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 60/133 (45%), Gaps = 16/133 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HSLAL   G +F WG ++ GQLGL   D++ +  P +++ +    V     G  H 
Sbjct: 126 AGGHHSLALTISGTIFAWGKNSFGQLGL--GDQQDRLFPTKIQSMNGKHVRYISCGEEHS 183

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           ++LTS             G V+T+G  + GQLG    + + Q IPK V  L    V Q  
Sbjct: 184 VLLTSA------------GRVYTFGCGSSGQLG--HNEFEDQFIPKMVVDLMGTPVTQIA 229

Query: 122 AGYSHCLVLTSSG 134
            G  H L     G
Sbjct: 230 CGRKHTLAHVMKG 242


>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
            [Metaseiulus occidentalis]
          Length = 1152

 Score =  142 bits (359), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 147/332 (44%), Gaps = 92/332 (27%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            +W+ L  +  F   +   K  + ++L     + S N  ++    L + L+ L+ LN +N 
Sbjct: 663  SWFGLYDEHMFGDFVRSVKSIIDHVL-----IYSKNDTMS----LEYALKTLRILNGVNR 713

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            E L                        V +  FY+  L     I  DY  W    P+   
Sbjct: 714  EKLI-----------------------VPFEEFYIEILHQHISIEKDYQEWSMLSPDVRM 750

Query: 935  RD-FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQT---NFYLFLQTFNPHTLNQYLEVE 990
               F C+YPF+FDA AKT +L  D  IQ   A+ Q+   N       F    +  YL ++
Sbjct: 751  HKIFFCDYPFVFDAAAKTIILLCDAAIQKHSAVTQSMQQNLNPLAMMFRQQQIQPYLILK 810

Query: 991  VSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLML 1050
            V RDNI++D++ +LA     D KKPLKV             F GE+A D GGVR+EF ML
Sbjct: 811  VRRDNIIQDSLHQLASKECQDLKKPLKV------------IFAGEDAVDEGGVRKEFFML 858

Query: 1051 LLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEYEET 1110
            L++EILDPK+GMF  YE+++ +WF +D                               ++
Sbjct: 859  LIREILDPKFGMFTVYEDSQYMWFHQD-------------------------------DS 887

Query: 1111 RSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
            R++             FLIG +CGLAIYN T+
Sbjct: 888  RTV-------------FLIGIMCGLAIYNQTI 906



 Score =  120 bits (300), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 197/477 (41%), Gaps = 128/477 (26%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL + G+V+ WG ++ GQLG     ++S+  P+ VK LA  +VVQ   G +HCL
Sbjct: 109 GQQHSMALTEAGQVYMWGSNSKGQLG-NGEGQESRLSPRFVKTLAPFTVVQIACGSNHCL 167

Query: 63  VLTSTTGLW-----------------------------------------HSLALNDCGE 81
            L +   L+                                         HS+ L+  G 
Sbjct: 168 ALLNNGALYAWGDNGNGQLGIGTVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGV 227

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC--- 138
           +F WG +  GQLGL  +D K ++ P  +K L    V    AG +H   LT+ G V     
Sbjct: 228 IFVWGSNRFGQLGL--SDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFGW 285

Query: 139 ----THKEN----GCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNS 190
               +H+      G  S+P    QS L +   + I       E        YGQ+G  + 
Sbjct: 286 SFYESHEVRISLRGTESNP----QSALARKLFSLIER-----EFCRHSYGSYGQLGHGSK 336

Query: 191 NTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI------GSAV------- 237
           N  +T P +++ L+   I  IA G  H+   + +V +++ FG+      GS+V       
Sbjct: 337 NDQLT-PMKIQELMGTTITQIALGRCHTVCYAPTVGKVFTFGLGGNGQLGSSVSMVSTPT 395

Query: 238 --------------------------QLDSPKSVHKT------PQLIHGPWIASPVAMTA 265
                                     Q+D  + +++       P   H P     + M  
Sbjct: 396 PLAGNWGKSLEIKLFRRSSTKSDQTNQIDWSEKLNEESIPRDDPGESHEPLDPEDIDMEV 455

Query: 266 GED-------SLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVLSD----DFRVLNPATQI 314
            E        ++   S  L+V  I++GGD S +   +S    LS+    D+R+     +I
Sbjct: 456 EESPDEEEEPAIELQSRELLVYSIFAGGDRSFLVCHESKQ--LSENRPADYRIRPKIQEI 513

Query: 315 LDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSFLQVENDEHFSC 371
             +  + L+     +  LK DE + +D++ YLE +  S  C+NGSFL VE+D H++C
Sbjct: 514 STLEIDILES----LPFLKKDEQVPEDIMNYLEPILSSLACLNGSFL-VEDDGHYNC 565



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 130/285 (45%), Gaps = 74/285 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           TG  H+L L   G V + G + H QLG E +  K    P+ V  L  + +VQ C G    
Sbjct: 58  TGAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTTK----PEPVTALQCLRIVQVCCGQQ-- 111

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                     HS+AL + G+V+ WG ++ GQLG     ++S+  P+ VK LA  +VVQ  
Sbjct: 112 ----------HSMALTEAGQVYMWGSNSKGQLG-NGEGQESRLSPRFVKTLAPFTVVQIA 160

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G +HCL L ++G                                       LY WG+N 
Sbjct: 161 CGSNHCLALLNNGA--------------------------------------LYAWGDNG 182

Query: 182 YGQMGINNSNTTVTKPQR----VESLVNLPIALIACGANHSFVLSKS-------VSRLYA 230
            GQ+GI     TV +PQR    V +L+ LP++ IACGANHS VLSKS        +R   
Sbjct: 183 NGQLGIG----TVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQ 238

Query: 231 FGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSG 275
            G+        P ++ KT +  H  +IA+  A +A   +L +H G
Sbjct: 239 LGLSDNKDRAFP-TLLKTLRQQHVKFIAAGGAHSA---ALTAHGG 279



 Score =  105 bits (262), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 69/101 (68%), Gaps = 7/101 (6%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+     T YE+++ +WF +D   D    FLIG +CGLAIYN TII +PFPLALYKK
Sbjct: 866 PKFGM----FTVYEDSQYMWFHQD---DSRTVFLIGIMCGLAIYNQTIIPLPFPLALYKK 918

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L EP+ LQDL  L+P  AK LQD+L+Y   D+E VF + F
Sbjct: 919 LLREPVNLQDLAVLTPATAKGLQDLLNYDGDDVESVFCLNF 959



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 6/102 (5%)

Query: 411 VPKSWL-YLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERES 469
           VP+  + YLE +  S  C+NGSFL VE+D H++C   N G+D++L      ++   +  S
Sbjct: 533 VPEDIMNYLEPILSSLACLNGSFL-VEDDGHYNCTGLNHGIDVELAMRGLKSLEDTKNTS 591

Query: 470 VRSLV-SNLAILASHAHLVKSLWNTPPDAEALRMFLTLPLYH 510
           ++  + + L+ L S   L+ +    P D E +R+F  +PL H
Sbjct: 592 LQEFIGAQLSELLSKMQLMST---NPTDIECIRVFFLVPLCH 630


>gi|301618548|ref|XP_002938676.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Xenopus
            (Silurana) tropicalis]
          Length = 971

 Score =  139 bits (350), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/344 (31%), Positives = 163/344 (47%), Gaps = 101/344 (29%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDIT------FNRKLSFCLQVLQK 868
            NW+  +   YF +LI ++K+ ++YLL         NG  T      F   ++  L++L+K
Sbjct: 467  NWWAQVCPKYFLKLISLYKEAVVYLL---------NGRKTLLIPVLFTSYITAALKLLEK 517

Query: 869  LNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISG 928
            L+ +N +                        + V +  FY+P+++++ DI+ DY  W   
Sbjct: 518  LHKVNGK-----------------------AQHVEHDTFYIPEISSLVDIQEDYLMWFLN 554

Query: 929  RPNGSTRDF-------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFN 979
                  R         LC+YPF+FDA+AKT +L+ D  +QM+ A+N  N      L T +
Sbjct: 555  EAGLKLRPTIMQDSITLCSYPFVFDAQAKTKMLQTDAELQMQVAINGANLQNVFMLLTLD 614

Query: 980  PHTL-NQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
            P  + N +L + V R ++V D +REL+ Y+  D KKPLKV             F GEEA 
Sbjct: 615  PMLVKNPFLVLHVRRTSLVADALRELSIYSDIDLKKPLKV------------IFDGEEAV 662

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
            D GGV +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N               
Sbjct: 663  DDGGVTKEFFLLLLKELLNPIYGMFTVYQDSNLLWFSDICFVEHN--------------- 707

Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                           WF            LIG +CGLAIYN+TV
Sbjct: 708  ---------------WFH-----------LIGIMCGLAIYNFTV 725



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 166/373 (44%), Gaps = 46/373 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+L L + G+V++ G +  GQLG +         P +V  L    +     G SH     
Sbjct: 45  HTLFLLEDGQVYSCGWNGEGQLGHDHEGTD----PVQVTTLTEEHITHIACGQSH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  +LAL+  G++++WG    GQLG  + +  S+ IP+ +K L    + Q   G  
Sbjct: 96  -------NLALSYQGQLYSWGSGNDGQLGHATVEHSSR-IPRIIKKLNQQKIQQVSCGND 147

Query: 126 HCLVL-TSSGVVTCTHK--ENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           HC+ L          HK     CG +             HT I  L   G L+T+G    
Sbjct: 148 HCMALGDXXXXXXXXHKVIYISCGEE-------------HTAI--LTKAGGLFTFGAGGS 192

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G ++ N  +  P+RV  L+   ++ IACG  H+     S   LYAFG G   QL + 
Sbjct: 193 GQLGHDSLNNEIN-PRRVLELMGSEVSQIACGRQHTLAFVPSSGTLYAFGCGDLGQLGTG 251

Query: 243 -KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVL 301
            K+  K P ++ G W A    ++   D    +    +VK+I+SGG+ + V  +K      
Sbjct: 252 HKNNVKCPAVVKGKWAAHSGQISMHADRAAYN----IVKQIFSGGNKTFVLCSKLESSQP 307

Query: 302 SDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSFL 361
           +DDFR  +       +N E +     +V + K  E  + + +  +     S  C NGSFL
Sbjct: 308 ADDFRFCSQRNHTSVINEETI-----DVWRQKVLENSNTNSMNGIVQTLSSLACWNGSFL 362

Query: 362 QVENDEHFSCNSK 374
           +  NDEHF  + K
Sbjct: 363 EKRNDEHFRTSPK 375



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 198/449 (44%), Gaps = 82/449 (18%)

Query: 424 SPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAILASH 483
           S  C NGSFL+  NDEHF  + K PG++M   +  ++ +  +    +   +    +    
Sbjct: 353 SLACWNGSFLEKRNDEHFRTSPKIPGINMCSIKVLFEKLMNVHHSRLLEQI----LKGFE 408

Query: 484 AHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGA-----------LPAF 532
           + L+  L ++PPD EA+R+++ LP +    + + +  L +P A A           L  +
Sbjct: 409 SFLIPQLSSSPPDVEAMRIYIILPEFPLLQDSKYYITLTLPLAMAILRLDTNPSKVLDNW 468

Query: 533 WIVVFGSLIGICGLGHLDFYRELLLSISNFCDRLFLVGNSVLLVLCVLMFYPLSHIHRFR 592
           W  V         L  +  Y+E ++ + N        G   LL+  +   Y  + +    
Sbjct: 469 WAQVCPKYF----LKLISLYKEAVVYLLN--------GRKTLLIPVLFTSYITAALKLLE 516

Query: 593 TPGPIVLMHGTLPLVIYCDQYFFPCPSCYTLA----------LMEPRSTLTGTLKRASVI 642
                  +H       + +   F  P   +L           L E    L  T+ + S+ 
Sbjct: 517 K------LHKVNGKAQHVEHDTFYIPEISSLVDIQEDYLMWFLNEAGLKLRPTIMQDSIT 570

Query: 643 VCGLTGLVLSQF--YVLQRDRTFE---------LVGITVLL----LVVPYPLRMLATSLA 687
           +C    +  +Q    +LQ D   +         L  + +LL    ++V  P  +L     
Sbjct: 571 LCSYPFVFDAQAKTKMLQTDAELQMQVAINGANLQNVFMLLTLDPMLVKNPFLVLHVRRT 630

Query: 688 SLILFTAMRNSSV--DVFPDFPIVAAYP-KNGINHYGIT-------EYEETRSIWFSEDT 737
           SL+   A+R  S+  D+    P+   +  +  ++  G+T         E    I+     
Sbjct: 631 SLVA-DALRELSIYSDIDLKKPLKVIFDGEEAVDDGGVTKEFFLLLLKELLNPIYGMFTV 689

Query: 738 FEDQNM------CF-------LIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLK 784
           ++D N+      CF       LIG +CGLAIYN+T++++ FPLALYKK+L+    L+DLK
Sbjct: 690 YQDSNLLWFSDICFVEHNWFHLIGIMCGLAIYNFTVVDLYFPLALYKKLLNVQPTLEDLK 749

Query: 785 DLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +LSPT  +SLQ++LDY E D++DVF + F
Sbjct: 750 ELSPTEGRSLQELLDYPEDDVDDVFCLNF 778



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 18/155 (11%)

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTH 140
           +  WG  T GQLG   + + S S P   +   +  V +   G  H L L   G V +C  
Sbjct: 1   MLCWGHSTFGQLGNGHSFQGSVSDPCVCRFSLAACVKEVACGGKHTLFLLEDGQVYSCGW 60

Query: 141 KENGC------GSDPSQGVQSNLVQDSHTTIT--------SLNSPGELYTWGNNEYGQMG 186
              G       G+DP   VQ   + + H T          +L+  G+LY+WG+   GQ+G
Sbjct: 61  NGEGQLGHDHEGTDP---VQVTTLTEEHITHIACGQSHNLALSYQGQLYSWGSGNDGQLG 117

Query: 187 INNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
                 +   P+ ++ L    I  ++CG +H   L
Sbjct: 118 HATVEHSSRIPRIIKKLNQQKIQQVSCGNDHCMAL 152


>gi|324502986|gb|ADY41305.1| E3 ubiquitin-protein ligase HERC4 [Ascaris suum]
          Length = 1038

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 144/340 (42%), Gaps = 100/340 (29%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
            T   W+  +   +F RL+      L  L+ Q    D+          L+ C Q+L  LN 
Sbjct: 549  TLEGWWSALEPRHFNRLVCSLVSALHQLVDQEPTNDAA--------ALTLC-QILATLNR 599

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +NNE                        +K+A   FY+  L    DI  DY RW  G  +
Sbjct: 600  INNEY-----------------------KKIALDKFYLTILKEKVDISNDYARWAFGEVH 636

Query: 932  GSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTN-----FYLFLQTFNPHTLNQY 986
            G       NYPF+ DA+ KT LL ++  IQM+ +M         F LF+Q+      + +
Sbjct: 637  GVFA--WSNYPFLMDAEVKTMLLHLEAAIQMQLSMTAGATVIFPFNLFVQS------DPF 688

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
              + VSR+NIV+D +  L    + D KKPLKV             FRGEE +DAGGV++E
Sbjct: 689  FIIRVSRENIVDDAMVALLSSKSIDLKKPLKV------------IFRGEEGDDAGGVKKE 736

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F MLL +E+L P YGMF E EE+  IWFS             G E               
Sbjct: 737  FFMLLFQELLQPTYGMFTENEESHLIWFS-------------GVE--------------- 768

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYT-VRFP 1145
                           DQ  + L G LC LAIYN   V FP
Sbjct: 769  --------------TDQLSFKLTGILCALAIYNNVLVDFP 794



 Score =  126 bits (316), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 146/545 (26%), Positives = 230/545 (42%), Gaps = 99/545 (18%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLASVSVVQACAGYSH 60
           TG  H+L L D G+V++ G + +G+LG     + S +I P  + G   V++VQ  AG +H
Sbjct: 75  TGERHTLFLADDGKVWSCGSNENGELGRGGCQEGSFTIYPVLLSG--GVNIVQIAAGRAH 132

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                       ++A+ D G +F WG ++HGQL L S +  S  IPKRV  L     VQ 
Sbjct: 133 ------------NMAVADDGRLFAWGSNSHGQLALPS-NITSTDIPKRVVSL--TETVQV 177

Query: 121 CAGYSHCLVLTSSG--VVTCTHKENGCGSDPSQ--------GVQSNLVQDSHTTITSLNS 170
             G  H + +  SG   V     +      P +         VQ N   D +  +T    
Sbjct: 178 ACGTDHTIAIVESGRIFVWGLQPDGRVLYAPKEIEFFMALPVVQVNAGSDYYVALTV--- 234

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
            G ++ WG+NEYGQ+G ++ N   T P  V +L +L +  +ACG +H+  L+    RL+ 
Sbjct: 235 SGAMFVWGSNEYGQLGTSD-NKERTTPAEVTTLHSLNVVHVACGHSHTVALTHE-GRLFV 292

Query: 231 FGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSI 290
            G  S  QL S            G  + S   M A  + L +H     V ++  G  H++
Sbjct: 293 CGSDSCGQLGS------------GRKVPSQNTMLAVTEMLGTH-----VTRVACGRCHTL 335

Query: 291 VTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVF 350
                            LN + Q+   N  R +   R ++ L              + V 
Sbjct: 336 ALAGGKMYAF------GLNSSGQLGSGNV-RSQVTPRPIDALT-------------DVVS 375

Query: 351 LSPGCMNGSFLQVENDEHFSCNS----KKFSFIKLSLINWFMKLHFSIFGQGFGCVCPTV 406
           +  G      +Q +N+E  S  +    +   F+ L  +         +F  G      +V
Sbjct: 376 VFAGWDQSFCIQSKNEEELSSATSYALQTPKFLSLRRLQ-------EVFNSGDKL---SV 425

Query: 407 LGDCVPKSWLYLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIAR-I 465
           +G+        LET F S   +NGSFL  EN+  F C+++N  +DM    D  + I    
Sbjct: 426 IGE--------LETAFSSLATLNGSFL-YENERRFRCSAQNSCLDMDSIVDASNIICESA 476

Query: 466 ERESVRSLVSNLAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNP--RQHEILHM 523
           + E    L+ N   L+    +    W  P   E+LR+FL +P  + F +P  +  +  H+
Sbjct: 477 DAEQYTELILNAVELSG---IWDVQWEKPQPIESLRIFLIIPSLYFFSSPTLKLVKAFHL 533

Query: 524 PFAGA 528
           PF  A
Sbjct: 534 PFVRA 538



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 55/96 (57%), Positives = 69/96 (71%), Gaps = 4/96 (4%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCF-LIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
           YG+ TE EE+  IWFS    E   + F L G LC LAIYN  +++ PFPLALYKKIL++ 
Sbjct: 750 YGMFTENEESHLIWFS--GVETDQLSFKLTGILCALAIYNNVLVDFPFPLALYKKILNQS 807

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +LL+DL +LSPT A+SLQ ILDY   DLE+VF +TF
Sbjct: 808 LLLEDLNELSPTEARSLQAILDYDGDDLEEVFALTF 843



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 164/453 (36%), Gaps = 119/453 (26%)

Query: 16  VFTWGGDTHGQLG----LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLW 71
            F +GGD  GQLG    L   D      P+ V G        A   +    V    TG  
Sbjct: 29  AFGYGGD--GQLGNRGFLNGDDGNIVKTPQVVVG--------APTSHDGVSVRAIATGER 78

Query: 72  HSLALNDCGEV------------------------------------------------- 82
           H+L L D G+V                                                 
Sbjct: 79  HTLFLADDGKVWSCGSNENGELGRGGCQEGSFTIYPVLLSGGVNIVQIAAGRAHNMAVAD 138

Query: 83  ----FTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG--VV 136
               F WG ++HGQL L S +  S  IPKRV  L     VQ   G  H + +  SG   V
Sbjct: 139 DGRLFAWGSNSHGQLALPS-NITSTDIPKRVVSL--TETVQVACGTDHTIAIVESGRIFV 195

Query: 137 TCTHKENGCGSDPSQ--------GVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGIN 188
                +      P +         VQ N   D +  +T     G ++ WG+NEYGQ+G +
Sbjct: 196 WGLQPDGRVLYAPKEIEFFMALPVVQVNAGSDYYVALT---VSGAMFVWGSNEYGQLGTS 252

Query: 189 NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV-HK 247
           + N   T P  V +L +L +  +ACG +H+  L+    RL+  G  S  QL S + V  +
Sbjct: 253 D-NKERTTPAEVTTLHSLNVVHVACGHSHTVALTHE-GRLFVCGSDSCGQLGSGRKVPSQ 310

Query: 248 TPQLIHGPWIASPVAMTA-GEDSLVSHSGGLVVKKIYS---------GGDHSIVTVTKSS 297
              L     + + V   A G    ++ +GG    K+Y+         G  +    VT   
Sbjct: 311 NTMLAVTEMLGTHVTRVACGRCHTLALAGG----KMYAFGLNSSGQLGSGNVRSQVTPRP 366

Query: 298 DGVLSDDFRVLNPATQ---ILDVNFERLKEC-------------EREVEQLKSDETLDQD 341
              L+D   V     Q   I   N E L                 R  E   S + L   
Sbjct: 367 IDALTDVVSVFAGWDQSFCIQSKNEEELSSATSYALQTPKFLSLRRLQEVFNSGDKL--S 424

Query: 342 LLLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           ++  LET F S   +NGSFL  EN+  F C+++
Sbjct: 425 VIGELETAFSSLATLNGSFL-YENERRFRCSAQ 456


>gi|324502900|gb|ADY41269.1| E3 ubiquitin-protein ligase HERC4 [Ascaris suum]
          Length = 824

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 144/340 (42%), Gaps = 100/340 (29%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
            T   W+  +   +F RL+      L  L+ Q    D+          L+ C Q+L  LN 
Sbjct: 335  TLEGWWSALEPRHFNRLVCSLVSALHQLVDQEPTNDAA--------ALTLC-QILATLNR 385

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +NNE                        +K+A   FY+  L    DI  DY RW  G  +
Sbjct: 386  INNEY-----------------------KKIALDKFYLTILKEKVDISNDYARWAFGEVH 422

Query: 932  GSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTN-----FYLFLQTFNPHTLNQY 986
            G       NYPF+ DA+ KT LL ++  IQM+ +M         F LF+Q+      + +
Sbjct: 423  GVFA--WSNYPFLMDAEVKTMLLHLEAAIQMQLSMTAGATVIFPFNLFVQS------DPF 474

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
              + VSR+NIV+D +  L    + D KKPLKV             FRGEE +DAGGV++E
Sbjct: 475  FIIRVSRENIVDDAMVALLSSKSIDLKKPLKV------------IFRGEEGDDAGGVKKE 522

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F MLL +E+L P YGMF E EE+  IWFS             G E               
Sbjct: 523  FFMLLFQELLQPTYGMFTENEESHLIWFS-------------GVE--------------- 554

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYT-VRFP 1145
                           DQ  + L G LC LAIYN   V FP
Sbjct: 555  --------------TDQLSFKLTGILCALAIYNNVLVDFP 580



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 55/96 (57%), Positives = 69/96 (71%), Gaps = 4/96 (4%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCF-LIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
           YG+ TE EE+  IWFS    E   + F L G LC LAIYN  +++ PFPLALYKKIL++ 
Sbjct: 536 YGMFTENEESHLIWFS--GVETDQLSFKLTGILCALAIYNNVLVDFPFPLALYKKILNQS 593

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +LL+DL +LSPT A+SLQ ILDY   DLE+VF +TF
Sbjct: 594 LLLEDLNELSPTEARSLQAILDYDGDDLEEVFALTF 629



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 157/383 (40%), Gaps = 71/383 (18%)

Query: 153 VQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIA 212
           VQ N   D +  +T     G ++ WG+NEYGQ+G ++ N   T P  V +L +L +  +A
Sbjct: 6   VQVNAGSDYYVALTV---SGAMFVWGSNEYGQLGTSD-NKERTTPAEVTTLHSLNVVHVA 61

Query: 213 CGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVS 272
           CG +H+  L+    RL+  G  S  QL S            G  + S   M A  + L +
Sbjct: 62  CGHSHTVALTHE-GRLFVCGSDSCGQLGS------------GRKVPSQNTMLAVTEMLGT 108

Query: 273 HSGGLVVKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQL 332
           H     V ++  G  H++                 LN + Q+   N  R +   R ++ L
Sbjct: 109 H-----VTRVACGRCHTLALAGGKMYAF------GLNSSGQLGSGNV-RSQVTPRPIDAL 156

Query: 333 KSDETLDQDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNS----KKFSFIKLSLINWFM 388
                         + V +  G      +Q +N+E  S  +    +   F+ L  +    
Sbjct: 157 T-------------DVVSVFAGWDQSFCIQSKNEEELSSATSYALQTPKFLSLRRLQ--- 200

Query: 389 KLHFSIFGQGFGCVCPTVLGDCVPKSWLYLETVFLSPGCMNGSFLQVENDEHFSCNSKNP 448
                +F  G      +V+G+        LET F S   +NGSFL  EN+  F C+++N 
Sbjct: 201 ----EVFNSGDKL---SVIGE--------LETAFSSLATLNGSFL-YENERRFRCSAQNS 244

Query: 449 GVDMQLCQDCYDTIAR-IERESVRSLVSNLAILASHAHLVKSLWNTPPDAEALRMFLTLP 507
            +DM    D  + I    + E    L+ N   L+    +    W  P   E+LR+FL +P
Sbjct: 245 CLDMDSIVDASNIICESADAEQYTELILNAVELSG---IWDVQWEKPQPIESLRIFLIIP 301

Query: 508 LYHEFMNP--RQHEILHMPFAGA 528
             + F +P  +  +  H+PF  A
Sbjct: 302 SLYFFSSPTLKLVKAFHLPFVRA 324



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 76/313 (24%)

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V+    G  + +AL   G +F WG + +GQLG  ++D K ++ P  V  L S++VV    
Sbjct: 5   VVQVNAGSDYYVALTVSGAMFVWGSNEYGQLG--TSDNKERTTPAEVTTLHSLNVVH--- 59

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
                        V C H                    SHT   +L   G L+  G++  
Sbjct: 60  -------------VACGH--------------------SHTV--ALTHEGRLFVCGSDSC 84

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G      +      V  ++   +  +ACG  H+  L+    ++YAFG+ S+ QL S 
Sbjct: 85  GQLGSGRKVPSQNTMLAVTEMLGTHVTRVACGRCHTLALAGG--KMYAFGLNSSGQLGSG 142

Query: 243 KSVHK-TPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVL 301
               + TP+ I               D+L        V  +++G D S    +K+ + + 
Sbjct: 143 NVRSQVTPRPI---------------DALTD------VVSVFAGWDQSFCIQSKNEEELS 181

Query: 302 SDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSFL 361
           S     L     +   +  RL+E     ++L         ++  LET F S   +NGSFL
Sbjct: 182 SATSYALQTPKFL---SLRRLQEVFNSGDKLS--------VIGELETAFSSLATLNGSFL 230

Query: 362 QVENDEHFSCNSK 374
             EN+  F C+++
Sbjct: 231 -YENERRFRCSAQ 242



 Score = 45.4 bits (106), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 16/126 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++AL   G +F  G D+ GQLG        + +P +   LA   ++        C 
Sbjct: 63  GHSHTVALTHEGRLFVCGSDSCGQLG------SGRKVPSQNTMLAVTEMLGTHVTRVAC- 115

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G  H+LAL   G+++ +G ++ GQLG  S + +SQ  P+ +  L  V  V A  
Sbjct: 116 ------GRCHTLALAG-GKMYAFGLNSSGQLG--SGNVRSQVTPRPIDALTDVVSVFAGW 166

Query: 123 GYSHCL 128
             S C+
Sbjct: 167 DQSFCI 172


>gi|444725178|gb|ELW65756.1| putative E3 ubiquitin-protein ligase HERC4 [Tupaia chinensis]
          Length = 870

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 138/317 (43%), Gaps = 59/317 (18%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+   EVF WG + +GQLGL   D K Q+ P+ +K L  +  +Q  AG +H  
Sbjct: 19  GYYHSLALSKASEVFCWGQNKYGQLGL-GIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSF 77

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           VLT +            G +F WG +  GQLGL   D+  + +P  +K L S  +V  C 
Sbjct: 78  VLTLS------------GAIFGWGRNKFGQLGLN--DENDRYVPNLLKSLRSQKIVYICC 123

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H   LT  G V                                      +T+G   Y
Sbjct: 124 GEDHTAALTKEGGV--------------------------------------FTFGAGGY 145

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS- 241
           GQ+G +NS +    P++V  L+   +  IACG  H+     S  R+Y+FG+G   QL + 
Sbjct: 146 GQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 204

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVL 301
             S  K+P  + G W   P       D  V       VK+I+SGGD S        +   
Sbjct: 205 STSNRKSPFTVKGNWF--PYNGQCPPD--VDSEEYFCVKRIFSGGDQSFSHYASPQNCGP 260

Query: 302 SDDFRVLNPATQILDVN 318
            DDFR  +P  QI  VN
Sbjct: 261 PDDFRCPDPTKQIWTVN 277



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 151/332 (45%), Gaps = 105/332 (31%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
               NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L+VL+ L+ 
Sbjct: 397  VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIKKPPSERRVFNSFLHTALKVLEILHR 456

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
            +N +T                      G+ + Y  FY+ ++  + DIR DY  W+  +  
Sbjct: 457  VNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 494

Query: 932  GSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYL-FLQTFNPHTLNQYLEVE 990
            G                    ++ +DQ     H  N ++ +L  +++ NP      L + 
Sbjct: 495  G--------------------MMAIDQ----AHRQNVSSLFLPVIESVNP-----CLILV 525

Query: 991  VSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLML 1050
            V R+NIV D +  L +    D+KKPLKV             F GE+A DAGGVR+EF +L
Sbjct: 526  VRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGGVRKEFFLL 573

Query: 1051 LLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEYEET 1110
            +++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L                       
Sbjct: 574  IMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------------------- 610

Query: 1111 RSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                              IG +CGLAIYN+T+
Sbjct: 611  ------------------IGVICGLAIYNFTI 624



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 581 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 636

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L +   L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 637 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 677



 Score = 41.2 bits (95), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 4/93 (4%)

Query: 437 NDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAILASHAHLVKSLWNTPPD 496
           ND+H+   ++  GVDM   +  +  + + +   +   V+     +   +L+  L ++ PD
Sbjct: 299 NDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA----ASLEKNLIPKLTSSLPD 354

Query: 497 AEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
            EALR +LTLP      +      + +PF  AL
Sbjct: 355 VEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 387


>gi|351711665|gb|EHB14584.1| Putative E3 ubiquitin-protein ligase HERC3 [Heterocephalus glaber]
          Length = 1051

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 150/285 (52%), Gaps = 48/285 (16%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   YF +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 547  NWWSQVCPKYFMKLVNLYKGAVLYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 603

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++++ DI+ DY  W   +     
Sbjct: 604  KV-----------------------KHVEYDTFYIPEISSLVDIQEDYLMWFLHQAGMKA 640

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 641  RPSIIQDAVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 700

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             +L + V R+N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV 
Sbjct: 701  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 748

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +LLLKE+L+P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 749  KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 793



 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 175/421 (41%), Gaps = 106/421 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q         
Sbjct: 92  GESHSLALSDQGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV-------- 142

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
               + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 143 ----SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFSSQASPQRVRSLEGIPLAQVAA 197

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H   L+ SG V                                      + WG N  
Sbjct: 198 GGAHSFALSLSGAV--------------------------------------FGWGMNNA 219

Query: 183 GQMGINNSN-----------------TTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
           GQ+G+++                   +    P  V+ L    +  I+CG  H+ VL+K  
Sbjct: 220 GQLGLSDEKGIKQGALDKTENIRGLYSNRESPCHVKLLRTQKVVYISCGDEHTAVLTKEH 279

Query: 226 SR-----LYAFGIG----SAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGG 276
            R     L++  +G       ++   ++V KT   +    I      + GE        G
Sbjct: 280 RRRHERVLWSEEVGVVSDRVTEIAEERTVRKTVVRMPQEAIMENTVCSEGEACFRVSEKG 339

Query: 277 L-----------------------VVKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQ 313
           +                       +VK+I+SGGD + V  +K  +   + DFR  N A  
Sbjct: 340 VREKLQLLKNVLLEFFLTDRFKYHIVKQIFSGGDQTFVLCSKYENSSPAVDFRTGNQAHY 399

Query: 314 ILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNS 373
              +N E +    +++ +  +  T++      +  +  S  C NGSFL+ + DEHF  + 
Sbjct: 400 TSLINDETIAVWRQKLSEHNNANTMNG-----VVQILSSAACWNGSFLEKKIDEHFKTSP 454

Query: 374 K 374
           K
Sbjct: 455 K 455



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 112/234 (47%), Gaps = 56/234 (23%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   ++    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDQGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           G+    ++   PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL
Sbjct: 170 GLGKEFSSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQL 222



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 764 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 823

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 824 GLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 858



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 430 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSMILEQILS 485

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 486 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 534


>gi|321452330|gb|EFX63739.1| hypothetical protein DAPPUDRAFT_267802 [Daphnia pulex]
          Length = 727

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 136/529 (25%), Positives = 216/529 (40%), Gaps = 116/529 (21%)

Query: 20  GGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDC 79
            G  HGQ+  E     + ++   V GL + ++ Q   G  H            +LA N+ 
Sbjct: 9   AGPGHGQVSGEF--NVNNNMLTSVDGLEAHNITQVACGAQH------------TLAQNEW 54

Query: 80  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCT 139
           GE+F WG +++GQLGL + ++     PK VK LA+  ++     +  CL L        +
Sbjct: 55  GEIFAWGSNSNGQLGL-NVEESMIPTPKMVKSLATKQMIVKSKLFRSCLRLGPKN----S 109

Query: 140 HKENGCGS--DPSQGVQSNLVQDSHTT--------ITSLNSPGELYTWGNNEYGQMGINN 189
             + G G   D  Q  Q   ++    T          +L   G + T+G   YGQ+G   
Sbjct: 110 FGQLGLGDTVDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVLTFGEGMYGQLGHYT 169

Query: 190 SNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH-KT 248
           S   +  P++V  L+   +  I CG  H+     S  R+YAFG+G + QL +  + +  +
Sbjct: 170 SANEML-PRKVLELMGTTVTQICCGRCHTLAFVPSKDRIYAFGLGGSGQLGTKSTANVNS 228

Query: 249 PQLIHGPWIASPVAM-------TAGEDSLVS-HSGGLVVKKIYSGGDHSIVTVTKSSDGV 300
           P L+ GPW  S  ++       T   D+L +  S  +VV+ I+ GGD S   V   ++  
Sbjct: 229 PHLVIGPWETSNNSIKDVKDLATETADALSAIQSKRVVVRNIFCGGDQSFSLVCPYTESF 288

Query: 301 LSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSF 360
            S D+R    ATQIL +  + +K    +V  L  D  +D DLL +               
Sbjct: 289 ESADYREHAVATQILSIFPDEIK----KVRALHPDVAVDLDLLRH--------------- 329

Query: 361 LQVENDEHFSCNSKKFSFIKLSLINWFMKLHFSIFGQGFGCVCPTVLGDCVPKSWLYLET 420
                            FI   ++  F +                +L    P S+  ++ 
Sbjct: 330 -----------------FISTRMLKLFSR----------------ILLATTPHSYELMDR 356

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           + ++   + G  L  E                      +  I+RIE  ++  L+      
Sbjct: 357 IMVAIRKIMGLILAAET---------------------FGQISRIEHPTICVLLRR---- 391

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
            +   L+ SL    PD E LR++L LPLYHEF+ P+  E LH PFA  L
Sbjct: 392 CTCNELLSSLSPVIPDIEVLRVYLILPLYHEFLQPKFFEELHFPFACVL 440



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/47 (61%), Positives = 38/47 (80%)

Query: 746 LIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPTLAK 792
           ++G LCGLAIYN+TIIN+PFPL LYKK+L EP+ L D+  L PT+ +
Sbjct: 590 ILGLLCGLAIYNFTIINLPFPLVLYKKLLAEPVELDDIGGLCPTVMR 636



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 71/163 (43%), Gaps = 35/163 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LA N+ GE+F WG +++GQLGL + ++     PK VK LA+  ++     +  CL
Sbjct: 44  GAQHTLAQNEWGEIFAWGSNSNGQLGL-NVEESMIPTPKMVKSLATKQMIVKSKLFRSCL 102

Query: 63  VLTSTT--------------------------------GLWHSLALNDCGEVFTWGGDTH 90
            L                                    G+ H+ AL   G V T+G   +
Sbjct: 103 RLGPKNSFGQLGLGDTVDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVLTFGEGMY 162

Query: 91  GQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
           GQLG  ++   ++ +P++V  L   +V Q C G  H L    S
Sbjct: 163 GQLGHYTS--ANEMLPRKVLELMGTTVTQICCGRCHTLAFVPS 203



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 29/130 (22%)

Query: 810 GITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTN--------GDITFNRKLSF 861
           G  +  W    + DYF RLI IFKQ +++++  P   D T                +L  
Sbjct: 448 GKVYDMWLAAANTDYFIRLINIFKQVVVHIIHLPSSFDPTEVLKCSRFLWTTRLGIRLKM 507

Query: 862 CLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRID 921
           CL VL+K+N++N +  T                      KV +  FY+P+L    D++ D
Sbjct: 508 CLDVLKKINNVNRQAATE---------------------KVGHEQFYIPELTDKVDVKRD 546

Query: 922 YFRWISGRPN 931
           YF+W+   PN
Sbjct: 547 YFKWLVDAPN 556


>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
          Length = 382

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 154/307 (50%), Gaps = 38/307 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q            
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV----------- 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 143 -SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 126 HCLVLTSSGVVTC--------------THKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT +  L 
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           AFG G+  QL +  + + K P  + G W A    ++A  D    H    +VK+I+SGGD 
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSGGDQ 373

Query: 289 SIVTVTK 295
           + V  +K
Sbjct: 374 TFVLCSK 380



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 111/234 (47%), Gaps = 56/234 (23%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   ++    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           G+     +   PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL
Sbjct: 170 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQL 222


>gi|198460678|ref|XP_002135944.1| GA23175 [Drosophila pseudoobscura pseudoobscura]
 gi|198139785|gb|EDY70848.1| GA23175 [Drosophila pseudoobscura pseudoobscura]
          Length = 500

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 131/243 (53%), Gaps = 74/243 (30%)

Query: 900  RKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQR 959
             +V+Y  FY P+L    +++ ++ +WI G PN  +   +CN+ F+FDA AKT++L+ DQ 
Sbjct: 226  ERVSYHIFYWPELDWYANVKQEFVKWIMGTPNEFS---ICNFSFLFDASAKTSMLQADQ- 281

Query: 960  IQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVN 1019
               +   N  N+ +         ++ Y+ + V+R N+V+D++REL  Y+ +D KKPLK+ 
Sbjct: 282  ---QGIFNLFNYGV--------PISHYIVLNVTRKNLVQDSLRELQHYSRSDLKKPLKI- 329

Query: 1020 DTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTF 1079
                       KF+ +EAEDAGGVR+EF MLLLK++LDPKY MFKE+EE+R +WF++ T 
Sbjct: 330  -----------KFQDDEAEDAGGVRKEFFMLLLKDLLDPKYSMFKEFEESRVLWFADIT- 377

Query: 1080 EDQNMYFLIGKEYVPCTYISKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYN 1139
                                                          Y+LIG LCGLAIYN
Sbjct: 378  ----------------------------------------------YYLIGVLCGLAIYN 391

Query: 1140 YTV 1142
            +T+
Sbjct: 392  FTI 394



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 6/91 (6%)

Query: 724 EYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDL 783
           E+EE+R +WF++ T+      +LIG LCGLAIYN+TIIN+PFPLALYKK+L++P+ L DL
Sbjct: 364 EFEESRVLWFADITY------YLIGVLCGLAIYNFTIINLPFPLALYKKLLNKPVDLSDL 417

Query: 784 KDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
           + LSP    SLQ +LDY      + F + F 
Sbjct: 418 QQLSPAEVNSLQALLDYDGEKFSETFDLNFE 448



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 47/215 (21%)

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVN---LPIALIACGANHSFVLSK 223
           +L   G++ + G+N+ GQ+G    N  +   + +  LV+   + +  IACG NHS  L+ 
Sbjct: 2   ALTEWGQILSCGDNDCGQVGHFTDNDVIELSKILRFLVSKRLVVVVQIACGNNHSLALT- 60

Query: 224 SVSRLYAFG--IGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKK 281
           S   LY++G  I   + + SPK +         P   +PV +T           G  +  
Sbjct: 61  SCGELYSWGYNIYGQLGIQSPKDL---------PHFNAPVQLTT--------ILGTPLAT 103

Query: 282 IYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           I  GG+HS + ++KSS                IL +  E  ++C    +        D D
Sbjct: 104 IACGGNHSFL-ISKSS---------------AILSLTAEATQQCAHIKQS-------DLD 140

Query: 342 LLLYLETVFLSPGCMNGSFLQVENDEHFSCNSKKF 376
           LL  +E +F S  C+NGSFL + ND+HF C+++ +
Sbjct: 141 LLQSMEVIFKSQACLNGSFL-LSNDDHFDCSARNY 174



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 40/57 (70%), Gaps = 1/57 (1%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLV 474
           +E +F S  C+NGSFL + ND+HF C+++N G+D++  +  +D +  +E ES++ ++
Sbjct: 145 MEVIFKSQACLNGSFL-LSNDDHFDCSARNYGLDLKAAEVAFDHLRSVENESIKQVL 200



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 18/137 (13%)

Query: 8   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS---VSVVQACAGYSHCLVL 64
           +AL + G++ + G +  GQ+G    D     + K ++ L S   V VVQ   G +H L L
Sbjct: 1   MALTEWGQILSCGDNDCGQVG-HFTDNDVIELSKILRFLVSKRLVVVVQIACGNNHSLAL 59

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLES-ADKKSQSIPKRVKGLASVSVVQ-ACA 122
           TS            CGE+++WG + +GQLG++S  D    + P ++  +    +   AC 
Sbjct: 60  TS------------CGELYSWGYNIYGQLGIQSPKDLPHFNAPVQLTTILGTPLATIACG 107

Query: 123 GYSHCLVLTSSGVVTCT 139
           G    L+  SS +++ T
Sbjct: 108 GNHSFLISKSSAILSLT 124



 Score = 44.3 bits (103), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLES-ADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
           HSLAL  CGE+++WG + +GQLG++S  D    + P ++  +    +     G +H  ++
Sbjct: 55  HSLALTSCGELYSWGYNIYGQLGIQSPKDLPHFNAPVQLTTILGTPLATIACGGNHSFLI 114

Query: 65  TSTTGL 70
           + ++ +
Sbjct: 115 SKSSAI 120


>gi|390368567|ref|XP_795936.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
            [Strongylocentrotus purpuratus]
          Length = 267

 Score =  136 bits (343), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 111/197 (56%), Gaps = 16/197 (8%)

Query: 897  HGGRKVAYTAFYMPDLATVCDIRIDYFRWISG---RPNGSTRDFLCNYPFIFDAKAKTTL 953
              G  + Y  F++P++    +++ D+ ++         G      C+YPF+FDA  K++L
Sbjct: 56   RSGEILPYYKFHIPNIGKYINMQDDFLQFFKNTVLHSTGCDSKTFCDYPFVFDADMKSSL 115

Query: 954  LEMDQRIQMEHAMNQTNFYLFLQTF-NPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDF 1012
            L +D  +QM+ AM +     F   F N   +N  L + V R+N+V   I +L     ++ 
Sbjct: 116  LHLDALLQMQFAMEEVQRVNFASVFFNMDPVNPCLILCVMRENLVSSAIDQLGHLDKSEL 175

Query: 1013 KKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSI 1072
            KKPLKV             F GEEA DAGGV++EF ML+++EILDPKYGMF+ ++++  I
Sbjct: 176  KKPLKV------------IFVGEEAIDAGGVQKEFFMLIMREILDPKYGMFRYFDDSGKI 223

Query: 1073 WFSEDTFEDQNMYFLIG 1089
            WF+  +FED  M+ L+G
Sbjct: 224  WFNSKSFEDTKMFRLVG 240



 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 4/63 (6%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    ++++  IWF+  +FED  M  L+G +CGLAIYN  II++PFPLALYKK
Sbjct: 209 PKYGMFRY----FDDSGKIWFNSKSFEDTKMFRLVGLVCGLAIYNNMIISLPFPLALYKK 264

Query: 773 ILD 775
           +LD
Sbjct: 265 LLD 267


>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1070

 Score =  135 bits (341), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 179/382 (46%), Gaps = 58/382 (15%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHCLVL 64
           H+LA+ D G+V  WG +  GQ GL + D + +  P+ +K L+S  V Q AC         
Sbjct: 99  HTLAVTDRGQVLGWGRNDRGQCGLSTGDSEDKRKPRFLKSLSSCQVAQVAC--------- 149

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKK-SQSIPKRVKGLASVSVVQ-ACA 122
               G  HS+AL   G +F WG ++ GQLG+ +  +   +  P+++  L  V + + AC 
Sbjct: 150 ----GSMHSMALTRDGRIFAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACG 205

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGS------------DPSQGVQSNLVQ-----DSHTTI 165
           G+ H   L+ SG V    K N CG              P + +++  V+      ++T I
Sbjct: 206 GW-HSFALSVSGAVFGWGKNN-CGQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAI 263

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             L + G L+ +G    GQ+G + S++    P+ V+  +   I  +ACG  H+ VL    
Sbjct: 264 --LTASGGLFLFGQGSEGQLG-HGSHSNEVNPRSVQGFLGSEITQVACGRQHTLVLEGRT 320

Query: 226 SRLYAFGIGSAVQL----DSPKSVHKTPQLIHGPWIA--SPVAMTAGEDSLVSHSGGLVV 279
            R ++ G GS  QL    DS KS   +P  + GPW A  S    + GE+S        ++
Sbjct: 321 GRFFSLGQGSKGQLGLDNDSSKSC-ASP--VPGPWEAPSSTEGCSNGEESRS------II 371

Query: 280 KKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLD 339
             I++GGD S   V++ +D     DFR   P+ + + +  + L+E       L+  + + 
Sbjct: 372 GSIFAGGDQSFCIVSRGNDPDHPLDFREAIPSIEPVVLTKDLLQEVSESSPLLEPSKAVQ 431

Query: 340 QDLLLYLETVFLSPGCMNGSFL 361
                 LE    SP C+N SFL
Sbjct: 432 T-----LEMALSSPACLNASFL 448



 Score =  105 bits (262), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 86/160 (53%), Gaps = 22/160 (13%)

Query: 931  NGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTF-NPHTLNQYLEV 989
             G      C+YPF+FDA  K++LL +D  +QM+ AM +     F   F N   +N  L +
Sbjct: 673  KGCDSKTFCDYPFVFDADMKSSLLHLDALLQMQFAMEEVQRVNFASVFFNMDPVNPCLIL 732

Query: 990  EVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLM 1049
             V R+N+V   I +L     ++ KKPLKV             F GEEA DAGGV++    
Sbjct: 733  CVMRENLVSSAIDQLGHLDKSELKKPLKV------------IFVGEEAIDAGGVQK---- 776

Query: 1050 LLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
                 ILD KYGMF+ ++++  IWF+  +FED  M+ L+G
Sbjct: 777  -----ILDHKYGMFRYFDDSGKIWFNSKSFEDTKMFRLVG 811



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 72/110 (65%), Gaps = 4/110 (3%)

Query: 718 NHYGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDE 776
           + YG+  Y +++  IWF+  +FED  M  L+G +CGLAIYN  II++PFPLALYKK+LD 
Sbjct: 780 HKYGMFRYFDDSGKIWFNSKSFEDTKMFRLVGLVCGLAIYNNMIISLPFPLALYKKLLDS 839

Query: 777 PILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFE 826
              L D K L P +A +LQ +LDY +P   + FG TF  ++ +  D++ E
Sbjct: 840 ETSLDDFKHLEPQVAHNLQSMLDYDDP---ETFGDTFPLFFQIDEDNFGE 886



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 104/266 (39%), Gaps = 81/266 (30%)

Query: 16  VFTWGGDTHGQLGLES--ADKKSQSIPKRVKGLASVSVVQACAGYSH-CLVLTSTT---- 68
           VF+WG    GQLG+     D  S S P+ V  LA   + +   G  H C++L   T    
Sbjct: 3   VFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMMC 62

Query: 69  ---------------------------------GLWHSLALNDCGEVFTWGGDTHGQLGL 95
                                            G  H+LA+ D G+V  WG +  GQ GL
Sbjct: 63  GANDRGQLGQDRPGSELAHVPATETLVITQVSCGNDHTLAVTDRGQVLGWGRNDRGQCGL 122

Query: 96  ESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQS 155
            + D + +  P+ +K L+S  V Q   G  H + LT                        
Sbjct: 123 STGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRD---------------------- 160

Query: 156 NLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTK--PQRVESLVNLPIALIAC 213
                           G ++ WG+N +GQ+GI     T+ +  PQ++ SL  +PI  +AC
Sbjct: 161 ----------------GRIFAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLAC 204

Query: 214 GANHSFVLSKSVSRLYAFGIGSAVQL 239
           G  HSF LS S   ++ +G  +  QL
Sbjct: 205 GGWHSFALSVS-GAVFGWGKNNCGQL 229



 Score = 40.4 bits (93), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 13/89 (14%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
           G +F +G  + GQLG  S   +    P+ VK      + Q   G  H LVL   TG ++S
Sbjct: 454 GGLFLFGQGSEGQLGHGSHSNEVN--PRSVKDFLGNEITQVACGRQHTLVLEGRTGGFYS 511

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKS 102
           L           G  + GQLGL++   KS
Sbjct: 512 L-----------GQGSKGQLGLDNGSSKS 529


>gi|358335048|dbj|GAA31002.2| E3 ubiquitin-protein ligase HERC4 [Clonorchis sinensis]
          Length = 1185

 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 165/381 (43%), Gaps = 90/381 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+ A++  G +FTWG +++GQLG E  D    S  K ++ LA   VVQ   G  H L
Sbjct: 100 GAYHNAAISYTGRLFTWGCNSNGQLGREGDD----SSVKMIRSLAEHRVVQVSLGLEHSL 155

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           VLT T+ L            F +G +  GQLGL         IP+++  LA + +    A
Sbjct: 156 VLTDTSRL------------FVFGSNIWGQLGLGFRSDLPIVIPQQLMCLAGLPIRCISA 203

Query: 123 GYSHCLVLTSSGV------------------------------------VTCTHKENGCG 146
           G  H  VLT SG                                     V C +K    G
Sbjct: 204 GGVHSAVLTISGTLYVWGGNKYGQLGLEPIETVAAETVSGSRSSIENAPVWCGNKYGQLG 263

Query: 147 SDPSQGVQSNLVQDSHTTITS--------------------------------LNSPGEL 174
            +P + V +  V  S ++I +                                L   G +
Sbjct: 264 LEPIETVAAETVSGSRSSIENAPQHSVSVPTAVRSLKGQRAVFVDCGESHTVVLTEEGGV 323

Query: 175 YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
           +T+G N++GQ+G   S+ +V+ P++V  L++ P   +ACG  H+ VL  S+  +YAFG G
Sbjct: 324 FTYGGNQFGQLGHGESSKSVSIPRKVADLMDNPTTQVACGRMHTLVLVPSLGCVYAFGAG 383

Query: 235 SAVQLDSPKSVHKT-PQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTV 293
           S  QL +  +   + P L+ GPW+       +   S  S    L V ++Y+GGDH+    
Sbjct: 384 SEGQLGTNTNTDSSRPTLVKGPWLTRGF---SSNQSTNSPDVPLEVARLYAGGDHAYALT 440

Query: 294 TKSS--DGVLSDDFRVLNPAT 312
            KS+    ++ +DFRV +P +
Sbjct: 441 RKSTIKSQIIVEDFRVWDPMS 461



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 138/284 (48%), Gaps = 46/284 (16%)

Query: 816  WYLLMSDDYFERLILIFKQCLIYLLQ-QPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            W+  +   YF++L+      ++Y+L  QP   D          + S  L+++++L  +N 
Sbjct: 679  WFARVQPRYFKKLVTNLNNHIVYILNMQPATADYERRSKEEGVRSS--LELMKRLYRINE 736

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
                             R P       ++Y +FY+P +    +I   +  W+  R +G  
Sbjct: 737  S----------------RQP------PISYVSFYIPVVREKVNIDSSFVSWLRERESGGM 774

Query: 935  RDF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTL--------NQ 985
              F  C+YPFIFDA  K  LL ++  + M++A+NQ      +Q+     L        + 
Sbjct: 775  HFFSFCDYPFIFDAPTKARLLSLEATLSMQNAVNQAERNTLIQSVMSPLLGYPVFTSTSP 834

Query: 986  YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
            +  V V RD +++DT+  L     ++ +K L+V            +F GEEA D GGV +
Sbjct: 835  FFHVTVRRDFLIQDTLTYLTVANPSELRKVLRV------------QFAGEEAVDEGGVMK 882

Query: 1046 EFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            EF +L+++++L P YGMF+ Y E+R +WF+E T E  N++ LIG
Sbjct: 883  EFFLLVMRDLLSPIYGMFRCYPESRMLWFNEFTMESDNVFLLIG 926



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/89 (47%), Positives = 62/89 (69%)

Query: 725 YEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLK 784
           Y E+R +WF+E T E  N+  LIG LCGLAIYN  I+++ FPLA+++K+L +  +L DL 
Sbjct: 903 YPESRMLWFNEFTMESDNVFLLIGILCGLAIYNSIIVDLAFPLAMFRKLLGDKPVLDDLM 962

Query: 785 DLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L P + +SLQ +LDY   D+ + F +TF
Sbjct: 963 ELDPVVGRSLQQLLDYEGQDVAETFCLTF 991



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 104/239 (43%), Gaps = 62/239 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHC 61
           G  H+L LN  GEV++ GG+  GQLG       S S  +R+  L + ++   AC  Y   
Sbjct: 50  GYKHTLFLNADGEVYSCGGNEFGQLG----RSDSPSDFRRITALENHTITDIACGAY--- 102

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                     H+ A++  G +FTWG +++GQLG E  D    S  K ++ LA   VVQ  
Sbjct: 103 ----------HNAAISYTGRLFTWGCNSNGQLGREGDD----SSVKMIRSLAEHRVVQVS 148

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G  H LVLT +                                        L+ +G+N 
Sbjct: 149 LGLEHSLVLTDT--------------------------------------SRLFVFGSNI 170

Query: 182 YGQMGIN-NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           +GQ+G+   S+  +  PQ++  L  LPI  I+ G  HS VL+ S   LY +G     QL
Sbjct: 171 WGQLGLGFRSDLPIVIPQQLMCLAGLPIRCISAGGVHSAVLTIS-GTLYVWGGNKYGQL 228



 Score = 61.2 bits (147), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 16/163 (9%)

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTH 140
           +F WG     QLG    D +  S P+ +      ++     GY H L L + G V +C  
Sbjct: 9   LFGWGACDDNQLGPHEQDSQQISSPQPITVPNPWTIAHVACGYKHTLFLNADGEVYSCGG 68

Query: 141 KENG--CGSDPSQGVQSNLVQDSHTTI---------TSLNSPGELYTWGNNEYGQMGINN 189
            E G    SD     +     ++HT            +++  G L+TWG N  GQ+G   
Sbjct: 69  NEFGQLGRSDSPSDFRRITALENHTITDIACGAYHNAAISYTGRLFTWGCNSNGQLGREG 128

Query: 190 SNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
            +++V   + + SL    +  ++ G  HS VL+ + SRL+ FG
Sbjct: 129 DDSSV---KMIRSLAEHRVVQVSLGLEHSLVLTDT-SRLFVFG 167


>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
          Length = 992

 Score =  133 bits (335), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 172/381 (45%), Gaps = 61/381 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K++  IPK++K LA + ++Q   G+    
Sbjct: 55  GKEHSLAVCHKGRVFAWGAASEGQLGIGEL-KETTFIPKKIKTLADIKIIQVACGH---- 109

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL++ G+VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 110 --------YHSLALSEDGQVFSWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 160

Query: 123 GYSHCLVLTSSGVVTCTHKENG------CGSDPSQGVQSNLVQD-------------SHT 163
           G +H   L+ SG        N         + P Q  +  LV                HT
Sbjct: 161 GGAHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHT 220

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            +  L   G+++T+G+N YGQ+G ++S      PQ VE +  L ++ I CG+ H+     
Sbjct: 221 AV--LTQDGKVFTFGDNSYGQLG-HDSTAEKRGPQLVERIEGL-VSQIDCGSYHTLAYVY 276

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
           +  ++ +FG G      SP        L     ++  ++    ED  V H        I+
Sbjct: 277 TTGQVVSFGRGPGCTRSSPHP----EALAESSDVSCLISANDLEDVQVKH--------IF 324

Query: 284 SGGDHSIVTVTK--SSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           +G   + VT  +  SS GV       ++   Q L   +  +     E E  KS+      
Sbjct: 325 AGTYANFVTTYQDTSSTGVSRKTLPEISRINQSLTEKWMAVARGSIEDEVTKSE------ 378

Query: 342 LLLYLETVFLSPGCMNGSFLQ 362
               +  +F SP C+  SFL+
Sbjct: 379 ----IRVIFSSPACLTASFLK 395



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 149/553 (26%), Positives = 239/553 (43%), Gaps = 97/553 (17%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           M+G  HSL L   G V + G ++ GQLG +   +  Q  P+R+  L ++ V     G   
Sbjct: 1   MSGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQ--PERIPALETLHVALVSCGKE- 57

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                      HSLA+   G VF WG  + GQLG+    K++  IPK++K LA + ++Q 
Sbjct: 58  -----------HSLAVCHKGRVFAWGAASEGQLGIGEL-KETTFIPKKIKTLADIKIIQV 105

Query: 121 CAGYSHCLVLTSSGVV----TCTHKENGCGSD-PSQ----------GVQSNLVQDSHTTI 165
             G+ H L L+  G V      +H + G G + PSQ          G+    V       
Sbjct: 106 ACGHYHSLALSEDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHS 165

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVT--KPQRVESLVNLPIALIACGANHSFVLSK 223
            +L+  G  + WG+N  GQ+ ++ +N  V   KP  V +L  L +  I+CG  H+ VL++
Sbjct: 166 FALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQ 225

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
              +++ FG  S  QL    +  K      GP              LV    GL V +I 
Sbjct: 226 D-GKVFTFGDNSYGQLGHDSTAEK-----RGP-------------QLVERIEGL-VSQID 265

Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKS-DETLDQDL 342
            G  H++  V  +                Q+  V+F R   C R     ++  E+ D   
Sbjct: 266 CGSYHTLAYVYTTG---------------QV--VSFGRGPGCTRSSPHPEALAESSDVSC 308

Query: 343 LLY---LETVFLSP--GCMNGSFLQVENDEHFSCNSKKFSFIKLSLINWFMKLHFSIFGQ 397
           L+    LE V +         +F+    D   +  S+K +  ++S IN  +   +    +
Sbjct: 309 LISANDLEDVQVKHIFAGTYANFVTTYQDTSSTGVSRK-TLPEISRINQSLTEKWMAVAR 367

Query: 398 GFGCVCPTVLGDCVPKSWLYLETVFLSPGCMNGSFLQV-ENDEHFSCNSKNPGVDMQLCQ 456
           G        + D V KS   +  +F SP C+  SFL+  E  E  S +     VD+++ +
Sbjct: 368 G-------SIEDEVTKS--EIRVIFSSPACLTASFLKKREPGEMVSID-----VDLEMAR 413

Query: 457 DCYDTIARIERESVRSLVSNLAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPR 516
           D +  +   E+E + S+++  A L    +L+ +L    P  EAL +FL LP     ++ R
Sbjct: 414 DTFKKLT--EKEWISSMIT--ACLRD--NLLGALPCRSPHQEALSVFLLLPECPVMLDSR 467

Query: 517 QHEILHMPFAGAL 529
               L +PFA A+
Sbjct: 468 NWMTLVVPFAEAV 480



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 65/96 (67%), Gaps = 1/96 (1%)

Query: 719 HYGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            YG+  Y EE   +WF  +   ++ M FL G LCGL++YN+ ++ +PFPLAL+KK+LD+ 
Sbjct: 703 EYGMFIYPEEDSYMWFPVNPKFEKKMYFLFGMLCGLSLYNFNVVYLPFPLALFKKLLDQE 762

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
             L+DLK+LSP+  K LQ++L+    D+++  GI F
Sbjct: 763 PSLEDLKELSPSFGKCLQEVLNDDANDIKEELGIRF 798



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 55/206 (26%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQ-YLEVEVSRDNIVE 998
            ++PF+F+  +K  LL+ D +I+M  +  + N+  F     P   +     + V R ++VE
Sbjct: 596  DFPFVFNLVSKIKLLQADSQIRMLKS-EENNYVNFGGIILPRRADSPSFTLRVRRSHLVE 654

Query: 999  DTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDP 1058
            D + +L+Q    D +K L             V+F  E      GV+ EF   + + +   
Sbjct: 655  DALCQLSQAEDTDLRKTL------------VVEFIKEIRSVGDGVKSEFFHCIFESMTKE 702

Query: 1059 KYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEYEETRSIWFSED 1118
            +YGMF        I+  ED++                                 +WF  +
Sbjct: 703  EYGMF--------IYPEEDSY---------------------------------MWFPVN 721

Query: 1119 TFEDQNMYFLIGTLCGLAIYNYTVRF 1144
               ++ MYFL G LCGL++YN+ V +
Sbjct: 722  PKFEKKMYFLFGMLCGLSLYNFNVVY 747


>gi|431904175|gb|ELK09597.1| Putative E3 ubiquitin-protein ligase HERC4 [Pteropus alecto]
          Length = 556

 Score =  133 bits (334), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 154/340 (45%), Gaps = 105/340 (30%)

Query: 804  DLEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCL 863
            +LE        NW+ ++    F +++ +FK+ +++LL+   +    +    FN  L   L
Sbjct: 279  NLEKAPLKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTAL 338

Query: 864  QVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYF 923
            +VL+ L+ +N +T                      G+ + Y  FY+ ++  + DIR DY 
Sbjct: 339  KVLEILHRVNEKT----------------------GQIIQYDKFYIHEVQELIDIRNDYI 376

Query: 924  RWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYL-FLQTFNPHT 982
             W+  +  G                    ++ +DQ     H  N ++ +L  +++ NP  
Sbjct: 377  NWVQQQAYG--------------------MMAIDQ----AHRQNVSSLFLPVIESVNP-- 410

Query: 983  LNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGG 1042
                L + V R+NIV D +  L +    D+KKPLKV             F GE+A DAGG
Sbjct: 411  ---CLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAVDAGG 455

Query: 1043 VRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYS 1102
            VR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L               
Sbjct: 456  VRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL--------------- 500

Query: 1103 MFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                                      IG +CGLAIYN+T+
Sbjct: 501  --------------------------IGVICGLAIYNFTI 514



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 6/151 (3%)

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
           N  G ++T+G   YGQ+G +NS +    P++V  L+   +  IACG  H+     S  R+
Sbjct: 22  NQEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRI 80

Query: 229 YAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGD 287
           Y+FG+G   QL +   S  K+P  + G W   P       D  +       VK+I+SGGD
Sbjct: 81  YSFGLGGNGQLGTGSTSNRKSPFTVKGNWF--PYNGQCPPD--IDSEEYFCVKRIFSGGD 136

Query: 288 HSIVTVTKSSDGVLSDDFRVLNPATQILDVN 318
            S    +   +    DDFR  +P+ QI  VN
Sbjct: 137 QSFSHYSNPQNCGPPDDFRCPDPSRQIWTVN 167



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/80 (52%), Positives = 58/80 (72%), Gaps = 4/80 (5%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    YE++R IWFS+ TFED ++  LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 471 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 526

Query: 773 ILDEPILLQDLKDLSPTLAK 792
           +L +   L DLK+L P + +
Sbjct: 527 LLKKKPSLDDLKELMPDVGR 546



 Score = 40.8 bits (94), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 4/93 (4%)

Query: 437 NDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAILASHAHLVKSLWNTPPD 496
           ND+H+   ++  GVDM   +  +  + + +   +   V+     +   +L+  L ++ PD
Sbjct: 189 NDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA----ASLEKNLIPKLTSSLPD 244

Query: 497 AEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
            EALR +LTLP      +      + +PF  AL
Sbjct: 245 VEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 277


>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
           caballus]
          Length = 988

 Score =  132 bits (331), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 141/538 (26%), Positives = 227/538 (42%), Gaps = 123/538 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG     K     PK++K L  + ++Q         
Sbjct: 54  GQEHSLAVCHRGRVFAWGAGSEGQLGTGEV-KGINFTPKKIKTLTGIKIIQV-------- 104

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
               + G +HSLAL++ G+VF+WG ++ GQLGL   +  SQ  P+RV+ L  + + Q  A
Sbjct: 105 ----SCGDYHSLALSEGGQVFSWGKNSQGQLGL-GKEFPSQDSPQRVRSLEGIPLAQVAA 159

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H   L+ SG                                        + WGNN  
Sbjct: 160 GGAHSFALSVSGTS--------------------------------------FGWGNNSA 181

Query: 183 GQMGINNSNTTVT--KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL- 239
           GQ+ ++ +N  V   KP+ + +L NL +  I+CG  H+ VL+++  +++ FG  S  QL 
Sbjct: 182 GQLALSGNNVPVQSYKPRSIGALRNLGVIYISCGYEHTAVLTQN-GKVFTFGDNSCGQLG 240

Query: 240 DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDG 299
            SP +  + PQ                   LV    GLV  +I  G  H++  V  +   
Sbjct: 241 HSPSAQDRGPQ-------------------LVERIDGLV-SQIDCGSYHTLAYVYTTG-- 278

Query: 300 VLSDDFRVLNPATQILDVNFERLKEC-------EREVEQLKSDETLDQDLLLYLETVFLS 352
                        Q+  V+F R   C       E ++E       L  + L+ ++   + 
Sbjct: 279 -------------QV--VSFGRGPSCRSSSTHPEAQIENFDISCLLSAEDLVDVQVKHIF 323

Query: 353 PGCMNGSFLQVENDEHFSCNSKKFSFIKLSLINWFMKLHFSIFGQGFGCVCPTVLGDCVP 412
            G    +F+    D   S  SKK +  ++S +N  +        + +  V        V 
Sbjct: 324 AGTY-ANFVTTSQDASSSSVSKK-TLPEISRMNQSLT-------EKWMAVTIGSTEHEVA 374

Query: 413 KSWLYLETVFLSPGCMNGSFLQV-ENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVR 471
           KS + L  +F SP C+  SFL+  E+ E  S +     VD+++ +D +  + + E     
Sbjct: 375 KSEISL--IFSSPACLTASFLKKRESGETISID-----VDLEMARDTFKKLTKKE----- 422

Query: 472 SLVSNLAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
             +S +       +L+++L    P  EAL +FL LP      + R   IL +PFA A+
Sbjct: 423 -WISLMVTTCLRDNLLRALPYRSPHQEALSVFLLLPECPVMHDSRNWAILVVPFAEAV 479



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 76/173 (43%), Gaps = 40/173 (23%)

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
           + G  HSLA+   G VF WG  + GQLG     K     PK++K L  + ++Q   G  H
Sbjct: 52  SCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEV-KGINFTPKKIKTLTGIKIIQVSCGDYH 110

Query: 127 CLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG 186
            L L                   S+G                   G++++WG N  GQ+G
Sbjct: 111 SLAL-------------------SEG-------------------GQVFSWGKNSQGQLG 132

Query: 187 INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           +     +   PQRV SL  +P+A +A G  HSF LS S +  + +G  SA QL
Sbjct: 133 LGKEFPSQDSPQRVRSLEGIPLAQVAAGGAHSFALSVSGTS-FGWGNNSAGQL 184



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 59/90 (65%), Gaps = 1/90 (1%)

Query: 719 HYGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            YG+  Y E  S +WF  +   ++   FL G LCGL++YN+ ++N+ FPLAL+KK+LD+ 
Sbjct: 701 EYGMFIYPEKGSCMWFPANPKFEEKSYFLFGMLCGLSLYNFNVVNLSFPLALFKKLLDQK 760

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLED 807
             L+D K+LSP   K+LQ+IL+ +    ED
Sbjct: 761 PSLEDFKELSPLWGKNLQEILNDQSDIGED 790



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 17/163 (10%)

Query: 930  PNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYL---FLQTFNPHTLNQY 986
            P   +     ++PFIF+  +K  LL+ D   QM +A      YL     Q  +    +  
Sbjct: 583  PENPSPVIFSDFPFIFNFLSKIKLLQADSIRQMRNATESA--YLGQTIRQGEDEFPPSPT 640

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
              ++V R ++VED +R+L+Q    D +K L +            +F  E   ++GGV+ E
Sbjct: 641  FILKVRRSHLVEDALRQLSQAEVTDLRKQLVI------------EFIKEIRPESGGVKSE 688

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            F   + +E+   +YGMF   E+   +WF  +   ++  YFL G
Sbjct: 689  FFHCIFEEMTKTEYGMFIYPEKGSCMWFPANPKFEEKSYFLFG 731


>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
           mutus]
          Length = 1019

 Score =  132 bits (331), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 177/384 (46%), Gaps = 66/384 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K++  IPK++K LA + ++Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGI-GEFKETTFIPKKIKTLAGIKIIQVACGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HS+AL++ G+VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 138 --------YHSVALSEDGQVFSWGTNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 123 GYSHCLVLTSSGVV-------------------TCTHKENGCGSDPSQGVQSNLVQDSHT 163
           G  H   L+ SG                        +K    G+  + GV S      HT
Sbjct: 189 GGHHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHT 248

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            +  L   G+++T+G+N YGQ+G ++       PQ VE +  L ++ I CG++H+     
Sbjct: 249 AV--LTQDGKVFTFGDNSYGQLG-HDPTAEKRGPQLVERIEGL-VSQIDCGSDHTLAYIY 304

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHS--GGLVV 279
           +  ++ +FG G       P    ++P          P A+    D   LVS      + V
Sbjct: 305 TTGQVVSFGRG-------PGCASRSPH---------PGALAESSDISCLVSAKDLADVQV 348

Query: 280 KKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFER-LKECEREVEQLKSDETL 338
           K I++G   + VT ++      S   + L   ++I     E+ +   +R +E    DE  
Sbjct: 349 KHIFAGTYANFVTTSQKDTSSTSVPRKTLPEISRINQSLTEKWMAVAKRSIE----DEVA 404

Query: 339 DQDLLLYLETVFLSPGCMNGSFLQ 362
             +    +  +F SP C+  SFL+
Sbjct: 405 KSE----IRVIFSSPACLTASFLK 424



 Score =  103 bits (258), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 106/234 (45%), Gaps = 56/234 (23%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L   G V + G ++ GQLG +   +  Q  P+R+  L ++ V     G  H 
Sbjct: 30  SGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQ--PERIPALETLHVALVSCGKEH- 86

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      SLA+   G VF WG  + GQLG+    K++  IPK++K LA + ++Q  
Sbjct: 87  -----------SLAVCHKGRVFAWGAASEGQLGI-GEFKETTFIPKKIKTLAGIKIIQVA 134

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H + L+  G                                      ++++WG N 
Sbjct: 135 CGHYHSVALSEDG--------------------------------------QVFSWGTNS 156

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
           +GQ+G+     +   PQRV SL  +P+A +A G +HSF LS S +   +FG GS
Sbjct: 157 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGT---SFGWGS 207



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 65/96 (67%), Gaps = 1/96 (1%)

Query: 719 HYGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            YG+  Y EE   +WF      ++ M FL G LCGL++YN+ ++ +PFPLAL+KK+LD+ 
Sbjct: 730 EYGMFMYPEEDSYMWFPVKPKFEKKMYFLFGMLCGLSLYNFNVVYLPFPLALFKKLLDQE 789

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
             L+DLK+LSP+  K LQ++L+    D+E+ FG+ F
Sbjct: 790 PSLEDLKELSPSFGKCLQEVLNDDANDIEEEFGLRF 825



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 18/153 (11%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQM--EHAMNQTNFY-LFLQTFNPHTLNQYLEVEVSRDNI 996
            ++PF+F+  +K  LL+ D +I+M      N  +F  + LQ  +   L     + V R ++
Sbjct: 623  DFPFVFNLMSKIKLLQADSQIRMLKSEVNNYMDFRGIILQRRDESPL---FTLSVRRSHL 679

Query: 997  VEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEIL 1056
            VED + +L+Q    D +K L V          +++  GE      GV+ EF   + + + 
Sbjct: 680  VEDALCQLSQAEDTDLQKILVVE------FIKEIRSGGE------GVKSEFFHCIFESMT 727

Query: 1057 DPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              +YGMF   EE   +WF      ++ MYFL G
Sbjct: 728  KEEYGMFMYPEEDSYMWFPVKPKFEKKMYFLFG 760


>gi|393912010|gb|EJD76548.1| hect domain and RLD 4, variant [Loa loa]
          Length = 1017

 Score =  130 bits (328), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 159/366 (43%), Gaps = 102/366 (27%)

Query: 783  LKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQ 842
            +K L     +S+Q +   RE D +         W+ L    +F RL+    + L  L++ 
Sbjct: 507  VKALHLPFVRSIQLL---READRK-----VLEKWWSLFERRHFNRLVSALVKALEQLVEH 558

Query: 843  PGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKV 902
                 +   D+     + FC  +L +LN++N                          + +
Sbjct: 559  E---PNNTSDV-----IPFC-SILSRLNAINRSQ-----------------------KLI 586

Query: 903  AYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQM 962
            AY  FY+ +L    D+  D  RW  G  +     +  NYPF+ +A+ KT LL+++ +IQM
Sbjct: 587  AYDKFYLQNLQKKVDMASDLARW--GFGDQQDLFYWSNYPFLLNAELKTYLLQLEAQIQM 644

Query: 963  EHAMNQTNFYL--FLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVND 1020
            + +M+ +   +  F  +  PH    + E+ V RDNIV+D +  L      D KKPLKV+ 
Sbjct: 645  QISMSTSGIMILPFNISLQPHP---FFELSVHRDNIVDDAMIALLSSKEMDLKKPLKVH- 700

Query: 1021 TSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFE 1080
                       F GEEA+DAGGV++EF MLL +E+L  KYGMF E EE+  IWFS     
Sbjct: 701  -----------FIGEEADDAGGVKKEFFMLLFQELLQAKYGMFTENEESHLIWFS----- 744

Query: 1081 DQNMYFLIGKEYVPCTYISKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNY 1140
                    G E  P ++                              L+G LC LAIYN 
Sbjct: 745  --------GVETDPLSFK-----------------------------LVGMLCALAIYNS 767

Query: 1141 T-VRFP 1145
              V FP
Sbjct: 768  VLVDFP 773



 Score =  100 bits (248), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 52/96 (54%), Positives = 68/96 (70%), Gaps = 4/96 (4%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCF-LIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
           YG+ TE EE+  IWFS    E   + F L+G LC LAIYN  +++ PFPLALYKKILD P
Sbjct: 729 YGMFTENEESHLIWFS--GVETDPLSFKLVGMLCALAIYNSVLVDFPFPLALYKKILDFP 786

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           + L+DL +LSP   +SL+ +LDY E D+E+VF +TF
Sbjct: 787 LELEDLSELSPAEGRSLRSLLDYEEDDVEEVFCLTF 822



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 176/389 (45%), Gaps = 78/389 (20%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS+A++D G +F WG ++HGQL + S D      PKRV  L     VQ   G SH 
Sbjct: 107 AGRSHSMAVSDDGRLFAWGSNSHGQLAM-SGDILISDTPKRVPSLPET--VQVACGASH- 162

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      +++LN  G VF WG         + +D + +  P  V+   SV ++Q  
Sbjct: 163 -----------TVSLNGGGRVFIWG---------QQSDGRIRHSPAEVELFVSVPIIQIS 202

Query: 122 AGYSHCLVLTSSGVVTC--THKENGCGS-------DPSQGVQSNLV-----QDSHTTITS 167
           AG    + LT+SG +     ++E   G+       +P +    N V      DSH+   +
Sbjct: 203 AGNLFTMALTASGTLFAWGRNEEGQLGNFTNRDVINPREVPNINSVVVVECGDSHSI--A 260

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G +++ G++ +GQ+G    + +    + +  ++   +  IACG  H+ V++    +
Sbjct: 261 LTHEGRVFSCGSDSFGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVVAN--GK 318

Query: 228 LYAFGIGSAVQLDSPKSVHK-TPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           ++ FG+ S  QL    + ++ TP++I               DS+ +      V  +++G 
Sbjct: 319 MHTFGLNSNGQLGHGNTRNQITPRMI---------------DSVEN------VASVFAGW 357

Query: 287 DHS--IVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLL 344
           D S  +   TK +  VLS       P++ +    +  L+   R++  +    T+  +   
Sbjct: 358 DQSFCLQIRTKHAYEVLS------GPSSSLQKPKYLSLQRV-RDLFAVGDKLTIIGE--- 407

Query: 345 YLETVFLSPGCMNGSFLQVENDEHFSCNS 373
            LE+VF S   +N SFL  EN++ + C++
Sbjct: 408 -LESVFSSLSSINASFL-YENEKRYRCSA 434



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 120/246 (48%), Gaps = 29/246 (11%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLASVSVVQACAGYSH 60
           +G  H+L L + G+V++ G + +G+LG     + S +I P  +    +V ++Q  AG SH
Sbjct: 54  SGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISN--AVRIIQISAGRSH 111

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                       S+A++D G +F WG ++HGQL + S D      PKRV  L     VQ 
Sbjct: 112 ------------SMAVSDDGRLFAWGSNSHGQLAM-SGDILISDTPKRVPSLP--ETVQV 156

Query: 121 CAGYSHCLVLTSSGVVTC--THKENGCGSDPSQG---VQSNLVQDSHTTI--TSLNSPGE 173
             G SH + L   G V       +      P++    V   ++Q S   +   +L + G 
Sbjct: 157 ACGASHTVSLNGGGRVFIWGQQSDGRIRHSPAEVELFVSVPIIQISAGNLFTMALTASGT 216

Query: 174 LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
           L+ WG NE GQ+G N +N  V  P+ V ++ +  + ++ CG +HS  L+    R+++ G 
Sbjct: 217 LFAWGRNEEGQLG-NFTNRDVINPREVPNINS--VVVVECGDSHSIALTHE-GRVFSCGS 272

Query: 234 GSAVQL 239
            S  QL
Sbjct: 273 DSFGQL 278



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 108/245 (44%), Gaps = 41/245 (16%)

Query: 15  EVFTWGGDTHGQLGLE--SADKKSQSI--PKRVKGLASVSVVQACAGYSHCLVLTSTTGL 70
           +++ +G  + GQL     SA   +Q +  P  V G        A  G     V    +G 
Sbjct: 5   QLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYG--------APTGQHGVTVKAVASGE 56

Query: 71  WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLASVSVVQACAGYSHCLV 129
            H+L L + G+V++ G + +G+LG     + S +I P  +    +V ++Q  AG SH + 
Sbjct: 57  KHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISN--AVRIIQISAGRSHSMA 114

Query: 130 LTSSGVV----TCTHKENGCG-----SDPSQGVQS--NLVQ----DSHTTITSLNSPGEL 174
           ++  G +    + +H +         SD  + V S    VQ     SHT   SLN  G +
Sbjct: 115 VSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHT--VSLNGGGRV 172

Query: 175 YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
           + WG    G+  I +S      P  VE  V++PI  I+ G   +  L+ S   L+A+G  
Sbjct: 173 FIWGQQSDGR--IRHS------PAEVELFVSVPIIQISAGNLFTMALTAS-GTLFAWGRN 223

Query: 235 SAVQL 239
              QL
Sbjct: 224 EEGQL 228


>gi|393912009|gb|EJD76547.1| hect domain and RLD 4 [Loa loa]
          Length = 1043

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 159/366 (43%), Gaps = 102/366 (27%)

Query: 783  LKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQ 842
            +K L     +S+Q +   RE D +         W+ L    +F RL+    + L  L++ 
Sbjct: 507  VKALHLPFVRSIQLL---READRK-----VLEKWWSLFERRHFNRLVSALVKALEQLVEH 558

Query: 843  PGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKV 902
                 +   D+     + FC  +L +LN++N                          + +
Sbjct: 559  E---PNNTSDV-----IPFC-SILSRLNAINRSQ-----------------------KLI 586

Query: 903  AYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQM 962
            AY  FY+ +L    D+  D  RW  G  +     +  NYPF+ +A+ KT LL+++ +IQM
Sbjct: 587  AYDKFYLQNLQKKVDMASDLARW--GFGDQQDLFYWSNYPFLLNAELKTYLLQLEAQIQM 644

Query: 963  EHAMNQTNFYL--FLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVND 1020
            + +M+ +   +  F  +  PH    + E+ V RDNIV+D +  L      D KKPLKV+ 
Sbjct: 645  QISMSTSGIMILPFNISLQPHP---FFELSVHRDNIVDDAMIALLSSKEMDLKKPLKVH- 700

Query: 1021 TSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFE 1080
                       F GEEA+DAGGV++EF MLL +E+L  KYGMF E EE+  IWFS     
Sbjct: 701  -----------FIGEEADDAGGVKKEFFMLLFQELLQAKYGMFTENEESHLIWFS----- 744

Query: 1081 DQNMYFLIGKEYVPCTYISKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNY 1140
                    G E  P ++                              L+G LC LAIYN 
Sbjct: 745  --------GVETDPLSFK-----------------------------LVGMLCALAIYNS 767

Query: 1141 T-VRFP 1145
              V FP
Sbjct: 768  VLVDFP 773



 Score =  100 bits (248), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 52/96 (54%), Positives = 68/96 (70%), Gaps = 4/96 (4%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCF-LIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
           YG+ TE EE+  IWFS    E   + F L+G LC LAIYN  +++ PFPLALYKKILD P
Sbjct: 729 YGMFTENEESHLIWFS--GVETDPLSFKLVGMLCALAIYNSVLVDFPFPLALYKKILDFP 786

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           + L+DL +LSP   +SL+ +LDY E D+E+VF +TF
Sbjct: 787 LELEDLSELSPAEGRSLRSLLDYEEDDVEEVFCLTF 822



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 176/389 (45%), Gaps = 78/389 (20%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS+A++D G +F WG ++HGQL + S D      PKRV  L     VQ   G SH 
Sbjct: 107 AGRSHSMAVSDDGRLFAWGSNSHGQLAM-SGDILISDTPKRVPSLPET--VQVACGASH- 162

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      +++LN  G VF WG         + +D + +  P  V+   SV ++Q  
Sbjct: 163 -----------TVSLNGGGRVFIWG---------QQSDGRIRHSPAEVELFVSVPIIQIS 202

Query: 122 AGYSHCLVLTSSGVVTC--THKENGCGS-------DPSQGVQSNLV-----QDSHTTITS 167
           AG    + LT+SG +     ++E   G+       +P +    N V      DSH+   +
Sbjct: 203 AGNLFTMALTASGTLFAWGRNEEGQLGNFTNRDVINPREVPNINSVVVVECGDSHSI--A 260

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G +++ G++ +GQ+G    + +    + +  ++   +  IACG  H+ V++    +
Sbjct: 261 LTHEGRVFSCGSDSFGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVVAN--GK 318

Query: 228 LYAFGIGSAVQLDSPKSVHK-TPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           ++ FG+ S  QL    + ++ TP++I               DS+ +      V  +++G 
Sbjct: 319 MHTFGLNSNGQLGHGNTRNQITPRMI---------------DSVEN------VASVFAGW 357

Query: 287 DHS--IVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLL 344
           D S  +   TK +  VLS       P++ +    +  L+   R++  +    T+  +   
Sbjct: 358 DQSFCLQIRTKHAYEVLS------GPSSSLQKPKYLSLQRV-RDLFAVGDKLTIIGE--- 407

Query: 345 YLETVFLSPGCMNGSFLQVENDEHFSCNS 373
            LE+VF S   +N SFL  EN++ + C++
Sbjct: 408 -LESVFSSLSSINASFL-YENEKRYRCSA 434



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 120/246 (48%), Gaps = 29/246 (11%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLASVSVVQACAGYSH 60
           +G  H+L L + G+V++ G + +G+LG     + S +I P  +    +V ++Q  AG SH
Sbjct: 54  SGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISN--AVRIIQISAGRSH 111

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                       S+A++D G +F WG ++HGQL + S D      PKRV  L     VQ 
Sbjct: 112 ------------SMAVSDDGRLFAWGSNSHGQLAM-SGDILISDTPKRVPSLP--ETVQV 156

Query: 121 CAGYSHCLVLTSSGVVTC--THKENGCGSDPSQG---VQSNLVQDSHTTI--TSLNSPGE 173
             G SH + L   G V       +      P++    V   ++Q S   +   +L + G 
Sbjct: 157 ACGASHTVSLNGGGRVFIWGQQSDGRIRHSPAEVELFVSVPIIQISAGNLFTMALTASGT 216

Query: 174 LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
           L+ WG NE GQ+G N +N  V  P+ V ++ +  + ++ CG +HS  L+    R+++ G 
Sbjct: 217 LFAWGRNEEGQLG-NFTNRDVINPREVPNINS--VVVVECGDSHSIALTHE-GRVFSCGS 272

Query: 234 GSAVQL 239
            S  QL
Sbjct: 273 DSFGQL 278



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 108/245 (44%), Gaps = 41/245 (16%)

Query: 15  EVFTWGGDTHGQLGLE--SADKKSQSI--PKRVKGLASVSVVQACAGYSHCLVLTSTTGL 70
           +++ +G  + GQL     SA   +Q +  P  V G        A  G     V    +G 
Sbjct: 5   QLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYG--------APTGQHGVTVKAVASGE 56

Query: 71  WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLASVSVVQACAGYSHCLV 129
            H+L L + G+V++ G + +G+LG     + S +I P  +    +V ++Q  AG SH + 
Sbjct: 57  KHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISN--AVRIIQISAGRSHSMA 114

Query: 130 LTSSGVV----TCTHKENGCG-----SDPSQGVQS--NLVQ----DSHTTITSLNSPGEL 174
           ++  G +    + +H +         SD  + V S    VQ     SHT   SLN  G +
Sbjct: 115 VSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHT--VSLNGGGRV 172

Query: 175 YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
           + WG    G+  I +S      P  VE  V++PI  I+ G   +  L+ S   L+A+G  
Sbjct: 173 FIWGQQSDGR--IRHS------PAEVELFVSVPIIQISAGNLFTMALTAS-GTLFAWGRN 223

Query: 235 SAVQL 239
              QL
Sbjct: 224 EEGQL 228


>gi|312086500|ref|XP_003145100.1| hypothetical protein LOAG_09523 [Loa loa]
          Length = 894

 Score =  129 bits (325), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 159/366 (43%), Gaps = 102/366 (27%)

Query: 783  LKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQ 842
            +K L     +S+Q +   RE D +         W+ L    +F RL+    + L  L++ 
Sbjct: 362  VKALHLPFVRSIQLL---READRK-----VLEKWWSLFERRHFNRLVSALVKALEQLVEH 413

Query: 843  PGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKV 902
                 +   D+     + FC  +L +LN++N                          + +
Sbjct: 414  E---PNNTSDV-----IPFC-SILSRLNAINRSQ-----------------------KLI 441

Query: 903  AYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQM 962
            AY  FY+ +L    D+  D  RW  G  +     +  NYPF+ +A+ KT LL+++ +IQM
Sbjct: 442  AYDKFYLQNLQKKVDMASDLARW--GFGDQQDLFYWSNYPFLLNAELKTYLLQLEAQIQM 499

Query: 963  EHAMNQTNFYL--FLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVND 1020
            + +M+ +   +  F  +  PH    + E+ V RDNIV+D +  L      D KKPLKV+ 
Sbjct: 500  QISMSTSGIMILPFNISLQPHP---FFELSVHRDNIVDDAMIALLSSKEMDLKKPLKVH- 555

Query: 1021 TSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFE 1080
                       F GEEA+DAGGV++EF MLL +E+L  KYGMF E EE+  IWFS     
Sbjct: 556  -----------FIGEEADDAGGVKKEFFMLLFQELLQAKYGMFTENEESHLIWFS----- 599

Query: 1081 DQNMYFLIGKEYVPCTYISKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNY 1140
                    G E  P ++                              L+G LC LAIYN 
Sbjct: 600  --------GVETDPLSFK-----------------------------LVGMLCALAIYNS 622

Query: 1141 T-VRFP 1145
              V FP
Sbjct: 623  VLVDFP 628



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 52/96 (54%), Positives = 68/96 (70%), Gaps = 4/96 (4%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCF-LIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
           YG+ TE EE+  IWFS    E   + F L+G LC LAIYN  +++ PFPLALYKKILD P
Sbjct: 584 YGMFTENEESHLIWFS--GVETDPLSFKLVGMLCALAIYNSVLVDFPFPLALYKKILDFP 641

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           + L+DL +LSP   +SL+ +LDY E D+E+VF +TF
Sbjct: 642 LELEDLSELSPAEGRSLRSLLDYEEDDVEEVFCLTF 677



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 42/244 (17%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
           G VF WG  + G++         +  P  V+   SV ++Q  AG    + LT++      
Sbjct: 25  GRVFIWGQQSDGRI---------RHSPAEVELFVSVPIIQISAGNLFTMALTAS------ 69

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
                 G +F WG +  GQLG  +   +    P+ V  + SV VV+   G SH + LT  
Sbjct: 70  ------GTLFAWGRNEEGQLG--NFTNRDVINPREVPNINSVVVVE--CGDSHSIALTHE 119

Query: 134 G-VVTC---THKENGCGS-DPSQGVQSNLVQ--DSHTTI-------TSLNSPGELYTWGN 179
           G V +C   +  + GCG    SQ     + +   SH T        T + + G+++T+G 
Sbjct: 120 GRVFSCGSDSFGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVVANGKMHTFGL 179

Query: 180 NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           N  GQ+G  N+   +T P+ ++S+ N  +A +  G + SF L       Y    G +  L
Sbjct: 180 NSNGQLGHGNTRNQIT-PRMIDSVEN--VASVFAGWDQSFCLQIRTKHAYEVLSGPSSSL 236

Query: 240 DSPK 243
             PK
Sbjct: 237 QKPK 240



 Score = 48.9 bits (115), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 16/127 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+AL   G VF+ G D+ GQLG      +SQ+  + +  +    V +   G  H +V+ 
Sbjct: 112 HSIALTHEGRVFSCGSDSFGQLGC-GQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVVA 170

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           +             G++ T+G +++GQLG    + ++Q  P+ +  + +V+ V A    S
Sbjct: 171 N-------------GKMHTFGLNSNGQLG--HGNTRNQITPRMIDSVENVASVFAGWDQS 215

Query: 126 HCLVLTS 132
            CL + +
Sbjct: 216 FCLQIRT 222


>gi|256077780|ref|XP_002575178.1| ubiquitin ligase [Schistosoma mansoni]
 gi|360043621|emb|CCD81167.1| putative hect E3 ubiquitin ligase [Schistosoma mansoni]
          Length = 1175

 Score =  129 bits (324), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 170/398 (42%), Gaps = 88/398 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+ A+   G +FTWG +++GQLG E  D       K V+ L+   VVQ   G  H L
Sbjct: 100 GAYHNAAITYNGLLFTWGCNSNGQLGREGDDTGV----KLVRALSDHKVVQVSLGVEHTL 155

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           VLT            D   VF +G +  GQLGL  + ++S SIP+++  L+ + V +  A
Sbjct: 156 VLT------------DTARVFAFGSNLKGQLGLGYSSEQSVSIPQQILCLSGLPVRRIVA 203

Query: 123 GYSHCLVLTSSGVVTCTHKEN----------------------GCGSDPSQGVQSNLVQD 160
           G  H  VLT SG +      N                       CGS  S  V     ++
Sbjct: 204 GGWHSFVLTVSGSLYAWGSNNYGQLGLSYFGSSPNDHQNELTLKCGSVGSTSVDDEQSKN 263

Query: 161 --------------------------------SHTTITSLNSPGELYTWGNNEYGQMGIN 188
                                             T   +L   G ++T+G   YGQ+G N
Sbjct: 264 RPFSPLDTSLSNVSIPTFVKTLRGCEVVYLACGETHTVALTRDGGVFTFGAGRYGQLGHN 323

Query: 189 NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK- 247
            S   ++ P+++   +   +  IACG  H+  L     RL+AFG G+  QL    + ++ 
Sbjct: 324 ESTIGISVPRKITEFMGNVVTQIACGRFHTLALVPKTGRLFAFGQGTNAQLGMGDTKNRL 383

Query: 248 TPQLIHGPWI----ASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHS--IVTVTKSSDGVL 301
            P  + G W+    +S    T G DS  S S   ++++I+SGGDH+  +  + ++ + V 
Sbjct: 384 LPCPVKGHWVSSHKSSSNESTVGTDS--SSSKPYIIRRIFSGGDHTYLLAQMYQAGETVD 441

Query: 302 SDDFRVLNPAT--QILDVNFERLKECEREVEQLKSDET 337
            DD R  N ++   IL +       C   VEQL++  T
Sbjct: 442 PDDLRNWNRSSLQSILTI-------CPEIVEQLRNAHT 472



 Score =  127 bits (319), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 137/285 (48%), Gaps = 46/285 (16%)

Query: 816  WYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNE 875
            W+  M   Y ++L+L     + Y+L        +   +     +   L+ +++L+ +N  
Sbjct: 667  WFTKMQPRYLKKLVLNLNNLISYILDMEPASAYSQRKLK-EESIRQALEFMKRLHRVNEN 725

Query: 876  TLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTR 935
                              P P     ++Y  FY+  L    +I   +  W+    +G  R
Sbjct: 726  H-----------------PNP-----ISYNTFYLTSLKDKINIGSAFVNWLQECNSGGMR 763

Query: 936  DF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQT----------FNPHTLN 984
             F  C+YPF+FDA +K  +L ++ R+ M+ AM+Q       Q+          ++  T +
Sbjct: 764  FFSFCDYPFVFDAASKAEMLNIEARLTMQQAMSQAQQSAIFQSLLSPFIGTRMYDGSTSS 823

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
             Y  + V RDNI++DT+  L      DFKK L+V            KF  EEA D GGV 
Sbjct: 824  PYFTIIVRRDNILQDTLSNLTMANPADFKKLLRV------------KFENEEAVDEGGVM 871

Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +EF +L+++++L+P YGMF+ Y E+R +WFSE T E +N++ ++G
Sbjct: 872  KEFFLLVMRDLLNPVYGMFRCYPESRMLWFSESTMESENVFLMVG 916



 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/101 (47%), Positives = 69/101 (68%), Gaps = 5/101 (4%)

Query: 725 YEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLK 784
           Y E+R +WFSE T E +N+  ++G LCGLAIYN  I+++ FPLA+++K+L E   L DLK
Sbjct: 893 YPESRMLWFSESTMESENVFLMVGILCGLAIYNSIIVDLSFPLAMFRKLLGETPGLDDLK 952

Query: 785 DLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYF 825
           +L P + +SLQ++LDY   DL DVF + F      ++ DYF
Sbjct: 953 ELDPIVGRSLQELLDYDNADLADVFCLNFT-----VTIDYF 988



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 104/264 (39%), Gaps = 82/264 (31%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT--------- 65
           E+F WG    GQL L+  D     IPK +      +++Q   GY+H + LT         
Sbjct: 8   ELFAWGSCEEGQLTLDKNDAYQILIPKALDVRNLPTLIQITCGYTHTVFLTIDGEVYSCG 67

Query: 66  -----------------------------STTGLWHSLALNDCGEVFTWGGDTHGQLGLE 96
                                           G +H+ A+   G +FTWG +++GQLG E
Sbjct: 68  CNEFQQLGHGQSGGQLAKVVALEHYRIISVACGAYHNAAITYNGLLFTWGCNSNGQLGRE 127

Query: 97  SADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN 156
             D       K V+ L+   VVQ   G  H LVLT +  V                    
Sbjct: 128 GDDTGV----KLVRALSDHKVVQVSLGVEHTLVLTDTARV-------------------- 163

Query: 157 LVQDSHTTITSLNSPGELYTWGNNEYGQMGIN-NSNTTVTKPQRVESLVNLPIALIACGA 215
                             + +G+N  GQ+G+  +S  +V+ PQ++  L  LP+  I  G 
Sbjct: 164 ------------------FAFGSNLKGQLGLGYSSEQSVSIPQQILCLSGLPVRRIVAGG 205

Query: 216 NHSFVLSKSVSRLYAFGIGSAVQL 239
            HSFVL+ S S LYA+G  +  QL
Sbjct: 206 WHSFVLTVSGS-LYAWGSNNYGQL 228



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 99/233 (42%), Gaps = 40/233 (17%)

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCT 139
           E+F WG    GQL L+  D     IPK +      +++Q   GY+H + LT  G V +C 
Sbjct: 8   ELFAWGSCEEGQLTLDKNDAYQILIPKALDVRNLPTLIQITCGYTHTVFLTIDGEVYSCG 67

Query: 140 HKE-NGCGSDPSQGVQSNLVQDSHTTITS----------LNSPGELYTWGNNEYGQMGIN 188
             E    G   S G  + +V   H  I S          +   G L+TWG N  GQ+G  
Sbjct: 68  CNEFQQLGHGQSGGQLAKVVALEHYRIISVACGAYHNAAITYNGLLFTWGCNSNGQLGRE 127

Query: 189 NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL----DSPKS 244
             +T V   + V +L +  +  ++ G  H+ VL+ + +R++AFG     QL     S +S
Sbjct: 128 GDDTGV---KLVRALSDHKVVQVSLGVEHTLVLTDT-ARVFAFGSNLKGQLGLGYSSEQS 183

Query: 245 VHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSS 297
           V    Q++                       GL V++I +GG HS V     S
Sbjct: 184 VSIPQQIL--------------------CLSGLPVRRIVAGGWHSFVLTVSGS 216



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 27/156 (17%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGL------------------------ESADKKS 36
           + G WHS  L   G ++ WG + +GQLGL                           D++S
Sbjct: 202 VAGGWHSFVLTVSGSLYAWGSNNYGQLGLSYFGSSPNDHQNELTLKCGSVGSTSVDDEQS 261

Query: 37  QSIP--KRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLG 94
           ++ P       L++VS+         C V+    G  H++AL   G VFT+G   +GQLG
Sbjct: 262 KNRPFSPLDTSLSNVSIPTFVKTLRGCEVVYLACGETHTVALTRDGGVFTFGAGRYGQLG 321

Query: 95  LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 130
             +      S+P+++       V Q   G  H L L
Sbjct: 322 -HNESTIGISVPRKITEFMGNVVTQIACGRFHTLAL 356


>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1024

 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 133/530 (25%), Positives = 224/530 (42%), Gaps = 107/530 (20%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K+    P+++  L  + ++Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGVGEL-KEINFTPRKITTLNGIKIIQVSCGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   +VF+WG ++HGQLGL   +  SQ  P+RV+ L  + + Q  A
Sbjct: 138 --------YHSLALSKDSQVFSWGKNSHGQLGL-GKEFPSQPSPQRVRSLEGIPLAQVAA 188

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H   L+             CG+                           + WG+N  
Sbjct: 189 GGAHSFALSL------------CGTS--------------------------FGWGSNSA 210

Query: 183 GQMGINNSNTTV--TKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           GQ+ ++  N  V   KP  + +L NL +  I+CG  H+ VLS+   +++ FG  S+ QL 
Sbjct: 211 GQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQD-GKVFTFGDNSSGQLG 269

Query: 241 -SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDG 299
            SP    + PQL+               D LVS        +I  GGDH+I  V  +   
Sbjct: 270 YSPTPEKRGPQLVERI------------DGLVS--------QIDCGGDHTIAYVHTTGQV 309

Query: 300 VLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGS 359
           V         P+      + E LKE       + +D+ +D    + ++ +F        +
Sbjct: 310 VSFGR----GPSATSKPTHPEALKENFDIRCLISADDLVD----VQVKHIFAG---KYAN 358

Query: 360 FLQVENDEHFSCNSKKFSFIKLSLINWFMKLHFSIFGQGFGCVCPTVLGDCVPKSWLYLE 419
           F+    D   S ++ + +  ++S I   M        + +  V        V KS + + 
Sbjct: 359 FVTTHQDTS-STSAPRKTLPEISRITQSM-------AEKWIAVKTRSTEHEVAKSEVRM- 409

Query: 420 TVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAI 479
            +F SP C+  SFL+       +C      VD+++ +D +  + + E       +S++  
Sbjct: 410 -IFSSPACLTASFLKKRGTGETTCID----VDLEMARDTFKKLTKKE------WISSMIT 458

Query: 480 LASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
                 L+++L    P  EAL +FL +P      + +  + L +PFA A+
Sbjct: 459 TCLEDDLLRALPCRSPHQEALSVFLLIPECPVMHDAKNWKNLVVPFAKAV 508



 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 1/95 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   FL G LCGL+++N  + N+PFPLALYKK+L++  
Sbjct: 733 YGMFMYPEKGSCMWFPAKPKLEKKRYFLFGVLCGLSLFNLNVANLPFPLALYKKLLNQKP 792

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L +SLQ++L+    D+ DV  + F
Sbjct: 793 SLEDLKELSPRLGRSLQEVLNDDADDIGDVLCLYF 827



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 15/153 (9%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYL---FLQTFNPHTLNQYLEVEVSRDNI 996
            ++PF+F+  +K  LL+ D  ++M  +  +   ++    L+       +    + V R ++
Sbjct: 622  DFPFVFNLLSKIKLLKADSHLKMWMSEEKEFMHMHETILKKREEFPPSPRFLLRVRRSHL 681

Query: 997  VEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEIL 1056
            VED +R+L+Q    DF K L             V+F  E   +AGGV  EF   + +E+ 
Sbjct: 682  VEDALRQLSQAEATDFCKLL------------VVEFTKEIRPEAGGVTSEFFHCIFEEMT 729

Query: 1057 DPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             P+YGMF   E+   +WF      ++  YFL G
Sbjct: 730  KPEYGMFMYPEKGSCMWFPAKPKLEKKRYFLFG 762


>gi|195177684|ref|XP_002028933.1| GL24727 [Drosophila persimilis]
 gi|194107978|gb|EDW30021.1| GL24727 [Drosophila persimilis]
          Length = 236

 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/183 (42%), Positives = 115/183 (62%), Gaps = 20/183 (10%)

Query: 900  RKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQR 959
             +V+Y  FY P+L    +++ ++ +WI G PN        ++ F+FDA AKT++L+ DQ 
Sbjct: 42   ERVSYQIFYWPELDWYANVKQEFVKWIMGTPNE------FSFSFLFDASAKTSMLQADQV 95

Query: 960  IQMEHAM-NQTNFYLFLQTFNPHT-LNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLK 1017
            +QM  AM N  N       FN    ++ Y+ + V+R N+V+D++REL  Y+ +D KK LK
Sbjct: 96   VQMHSAMANAANHQGIFNLFNYGVPISHYIVLNVTRKNLVQDSLRELQHYSRSDLKKALK 155

Query: 1018 VNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSED 1077
            +            KF+ EEAEDAGGVR+EF MLLLK++LDPKY MFKE EE+R + F++ 
Sbjct: 156  I------------KFQDEEAEDAGGVRKEFFMLLLKDLLDPKYIMFKELEESRVLLFADI 203

Query: 1078 TFE 1080
            T+E
Sbjct: 204  TYE 206


>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 988

 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 133/530 (25%), Positives = 224/530 (42%), Gaps = 107/530 (20%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K+    P+++  L  + ++Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGVGEL-KEINFTPRKITTLNGIKIIQVSCGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   +VF+WG ++HGQLGL   +  SQ  P+RV+ L  + + Q  A
Sbjct: 138 --------YHSLALSKDSQVFSWGKNSHGQLGL-GKEFPSQPSPQRVRSLEGIPLAQVAA 188

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H   L+             CG+                           + WG+N  
Sbjct: 189 GGAHSFALSL------------CGTS--------------------------FGWGSNSA 210

Query: 183 GQMGINNSNTTV--TKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           GQ+ ++  N  V   KP  + +L NL +  I+CG  H+ VLS+   +++ FG  S+ QL 
Sbjct: 211 GQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQD-GKVFTFGDNSSGQLG 269

Query: 241 -SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDG 299
            SP    + PQL+               D LVS        +I  GGDH+I  V  +   
Sbjct: 270 YSPTPEKRGPQLVERI------------DGLVS--------QIDCGGDHTIAYVHTTGQV 309

Query: 300 VLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGS 359
           V         P+      + E LKE       + +D+ +D    + ++ +F        +
Sbjct: 310 VSFGR----GPSATSKPTHPEALKENFDIRCLISADDLVD----VQVKHIFAG---KYAN 358

Query: 360 FLQVENDEHFSCNSKKFSFIKLSLINWFMKLHFSIFGQGFGCVCPTVLGDCVPKSWLYLE 419
           F+    D   S ++ + +  ++S I   M        + +  V        V KS + + 
Sbjct: 359 FVTTHQDTS-STSAPRKTLPEISRITQSM-------AEKWIAVKTRSTEHEVAKSEVRM- 409

Query: 420 TVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAI 479
            +F SP C+  SFL+       +C      VD+++ +D +  + + E       +S++  
Sbjct: 410 -IFSSPACLTASFLKKRGTGETTCID----VDLEMARDTFKKLTKKE------WISSMIT 458

Query: 480 LASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
                 L+++L    P  EAL +FL +P      + +  + L +PFA A+
Sbjct: 459 TCLEDDLLRALPCRSPHQEALSVFLLIPECPVMHDAKNWKNLVVPFAKAV 508



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 1/95 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   FL G LCGL+++N  + N+PFPLALYKK+L++  
Sbjct: 697 YGMFMYPEKGSCMWFPAKPKLEKKRYFLFGVLCGLSLFNLNVANLPFPLALYKKLLNQKP 756

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L +SLQ++L+    D+ DV  + F
Sbjct: 757 SLEDLKELSPRLGRSLQEVLNDDADDIGDVLCLYF 791



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 12/101 (11%)

Query: 989  VEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFL 1048
            + V R ++VED +R+L+Q    DF K L             V+F  E   +AGGV  EF 
Sbjct: 638  LRVRRSHLVEDALRQLSQAEATDFCKLL------------VVEFTKEIRPEAGGVTSEFF 685

Query: 1049 MLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              + +E+  P+YGMF   E+   +WF      ++  YFL G
Sbjct: 686  HCIFEEMTKPEYGMFMYPEKGSCMWFPAKPKLEKKRYFLFG 726


>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC6-like [Ailuropoda melanoleuca]
          Length = 1189

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 188/410 (45%), Gaps = 66/410 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K+   IP ++K L  + ++Q   G+    
Sbjct: 83  GKEHSLAVCYKGRVFAWGAGSEGQLGV-GEFKEINLIPTKIKTLTGIKIIQVSCGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL++ G+VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 138 --------YHSLALSEGGQVFSWGSNSHGQLGL-GKECPSQASPQRVRSLDGIPLTQVAA 188

Query: 123 GYSHCLVLTSSG-------------------VVTCTHKENGCGSDPSQGVQSNLVQDSHT 163
           G +H   L+ SG                   V   +HK    G+  + GV        HT
Sbjct: 189 GGAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHT 248

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            +  L   G+++T+G N YGQ+G ++       PQ VE +  L ++ I CG+ H+     
Sbjct: 249 AV--LTQTGKVFTFGGNSYGQLG-HSPTAEKEGPQLVEGIDGL-VSQIDCGSYHTLAYVY 304

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQ-LIHGPWIASPVAMTAGEDSLVSHSGGLVVKKI 282
           +  ++ +FG G +      KS    P+ L       SP++     + LV       VK I
Sbjct: 305 TTGKVVSFGRGPSC-----KSSPTHPKALTENVDFTSPISA----NDLVD----FQVKHI 351

Query: 283 YSGGDHSIVTVTKSSDGVLSDDFRVLNPA-TQILDVNFERLKECEREVEQLKSDETLDQD 341
           ++G   + VT  +  D   +D  R + P  +QI +   E+     R   Q    E    +
Sbjct: 352 FAGTHANYVTTYQ--DTSSTDVSRKILPEISQITESLTEKWIAVAR---QSAEHEVAKSE 406

Query: 342 LLLYLETVFLSPGCMNGSFL-QVENDEHFSCN----SKKFSFIKLSLINW 386
           +++    +F SP C+  SFL + E+ E  S +      + +F KL+   W
Sbjct: 407 IMM----IFSSPACLTASFLKERESVETISIDVDLQKARDTFEKLTKTEW 452



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 108/235 (45%), Gaps = 58/235 (24%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV-VQACAGYSH 60
           +G  HSL L   GE+ + G ++ GQLG +   +     PKR++ L ++ V + +C     
Sbjct: 30  SGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEH--PKRIRTLDNLRVDLVSC----- 82

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                   G  HSLA+   G VF WG  + GQLG+    K+   IP ++K L  + ++Q 
Sbjct: 83  --------GKEHSLAVCYKGRVFAWGAGSEGQLGV-GEFKEINLIPTKIKTLTGIKIIQV 133

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
             G+ H L L                   S+G                   G++++WG+N
Sbjct: 134 SCGHYHSLAL-------------------SEG-------------------GQVFSWGSN 155

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
            +GQ+G+     +   PQRV SL  +P+  +A G  HSF LS S +   +FG GS
Sbjct: 156 SHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFALSLSGA---SFGWGS 207



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 60/95 (63%), Gaps = 1/95 (1%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y EE   +WF      ++   FL G LCGL++ N  + N+PFPLAL+KK+LD+  
Sbjct: 724 YGMFIYPEEGSYMWFPVSPKFEKKRYFLFGILCGLSLNNSNVANLPFPLALFKKLLDQKP 783

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            LQDLK+LSP L K+LQ++L+    D+ +   I F
Sbjct: 784 SLQDLKELSPLLGKNLQEVLNNEADDIGEELDIYF 818



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 13/150 (8%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVED 999
            ++PFIF+  +K  LL+ + R++M   + Q  +    Q    +  +    + V R +++ED
Sbjct: 617  DFPFIFNLLSKILLLQAESRLKMLD-LKQKVYLDLGQVILQYNESPTFTLRVRRSHLIED 675

Query: 1000 TIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPK 1059
             +R+L+Q    D  K L       IY                GV  EF   + +E+   +
Sbjct: 676  ALRQLSQVKDTDLCKGLVTEFIKEIY------------SGGYGVISEFFYCIFEEMTKTE 723

Query: 1060 YGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            YGMF   EE   +WF      ++  YFL G
Sbjct: 724  YGMFIYPEEGSYMWFPVSPKFEKKRYFLFG 753



 Score = 42.0 bits (97), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 10/109 (9%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +F SP C+  SFL+    E  S  + +  VD+Q  +D ++ + + E       +S     
Sbjct: 410 IFSSPACLTASFLK----ERESVETISIDVDLQKARDTFEKLTKTE------WISYTITT 459

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
               +L+++L    P  EAL +FL LP      + R    L +PFA A+
Sbjct: 460 CLRDNLLRALPCRSPHREALSVFLLLPECPVMHDSRNWRSLVVPFAEAV 508


>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
           porcellus]
          Length = 1016

 Score =  126 bits (316), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 169/381 (44%), Gaps = 63/381 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G+VF WG  + GQLG    ++    IP+++K L  + ++Q   GY    
Sbjct: 89  GKEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEIC-FIPQKIKALTGIKIIQISCGY---- 143

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+  G+VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 144 --------YHSLALSKDGQVFSWGKNSHGQLGL-GQEFPSQASPQRVRSLEGIPLAQVAA 194

Query: 123 GYSHCLVLTSSG-------------------VVTCTHKENGCGSDPSQGVQSNLVQDSHT 163
           G +H   L+ SG                   V+  ++K    G+  + GV        HT
Sbjct: 195 GGAHSFALSLSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHT 254

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            + + N   +++T+G+N +GQ+G N  + T T PQ VE  +  P++ I CG+ H+     
Sbjct: 255 AVLTQND--QVFTFGDNSFGQLGHNGVSQT-TGPQLVEG-IGGPVSQIDCGSYHTLA--- 307

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
                Y +  G  V      S    P     P   S ++     D L      + +K I+
Sbjct: 308 -----YVYTTGQVVSFGREPSHTSNPTHPETPSENSDISCLISADDLRD----IQIKHIF 358

Query: 284 SGGDHSIVTVTKS--SDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           +G     VT  +   S G+   +   ++   + L   +  ++  +RE    +        
Sbjct: 359 AGTYADFVTTHQGTCSTGISRKNLPEISRIHESLAKRWTTIERAKREAANSE-------- 410

Query: 342 LLLYLETVFLSPGCMNGSFLQ 362
               +  +F SP C+  SFL+
Sbjct: 411 ----IRMIFSSPACLTASFLK 427



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 102/238 (42%), Gaps = 54/238 (22%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  H+L L     V   G ++ GQLG   A    Q  P+ ++ L ++ V     G  H 
Sbjct: 36  SGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQ--PEPIQALVNLPVDLVSCGKEH- 92

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      SLA+   G+VF WG  + GQLG    ++    IP+++K L  + ++Q  
Sbjct: 93  -----------SLAVCHKGKVFAWGVGSDGQLGTGKFEEIC-FIPQKIKALTGIKIIQIS 140

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            GY H L L+  G                                      ++++WG N 
Sbjct: 141 CGYYHSLALSKDG--------------------------------------QVFSWGKNS 162

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           +GQ+G+     +   PQRV SL  +P+A +A G  HSF LS S +  + +G  SA QL
Sbjct: 163 HGQLGLGQEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTS-FGWGNNSAGQL 219



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 1/90 (1%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y EE   +WF      ++   FL G LCGL+++N+ I  +PFPLALYKK+LD+  
Sbjct: 728 YGMFIYPEEGSCMWFPVSPKYEKKSYFLFGMLCGLSLFNFNIAKIPFPLALYKKLLDQKP 787

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDV 808
            L+DLK+LS    KSLQ++L     D E++
Sbjct: 788 SLEDLKELSLFWEKSLQEVLSDEGSDFEEL 817



 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 17/151 (11%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQ-YLEVEVSRDNIVE 998
            ++PFIF+ ++K  LL  D  ++M+    +T   ++ +      +    L + + R ++VE
Sbjct: 623  DFPFIFNLESKIKLLHADSIVKMQ----RTEEKVYQRGREEGKVESPRLILRIRRSHLVE 678

Query: 999  DTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDP 1058
            D +R+LAQ    D  K L V            +F  E   ++GGV  EF   + +E+  P
Sbjct: 679  DALRQLAQVEDADLSKTLVV------------EFIKEIRPESGGVTAEFFHCIFEEMTHP 726

Query: 1059 KYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +YGMF   EE   +WF      ++  YFL G
Sbjct: 727  EYGMFIYPEEGSCMWFPVSPKYEKKSYFLFG 757



 Score = 43.9 bits (102), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 12/113 (10%)

Query: 418 LETVFLSPGCMNGSFLQV-ENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSN 476
           +  +F SP C+  SFL+  E  E  S +     VD+Q+ +D +  +  +E+E + S+V+ 
Sbjct: 411 IRMIFSSPACLTASFLKKRETKETISID-----VDLQMARDTFKKL--MEKEWISSMVTE 463

Query: 477 LAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
                    L+++L +  P  EAL +FL LP      + +    L +PFA A+
Sbjct: 464 CL----KDDLLRALPSHSPHQEALSVFLLLPECPVMHDSKNWRSLVIPFAQAV 512


>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
           carolinensis]
          Length = 1081

 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 126/251 (50%), Gaps = 37/251 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+ + G V++WG  T GQLG  + +   + IPK +  L+   V+Q   G+    
Sbjct: 101 GKEHSLAVCNKGRVYSWGAGTFGQLG--TGELGDRLIPKTINALSKYKVIQVACGHD--- 155

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL + G +F+WG + HGQLGL   D  SQ+ P++V  L  + + Q  A
Sbjct: 156 ---------HSIALTNDGRIFSWGQNIHGQLGL-GKDISSQASPQQVSALDGIPLAQVAA 205

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV-------------------QDSHT 163
           G +H   L+ SGVV    + N      SQ      +                      HT
Sbjct: 206 GGAHSFALSLSGVVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHT 265

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            + + N  G +YT+G++  GQ+G N+S++    PQ+VE  ++ P++L+ACG+ H+ V   
Sbjct: 266 AVLTQN--GSVYTFGDDSAGQLGRNSSSSPKFGPQKVE-WIDGPVSLLACGSYHTLVRIS 322

Query: 224 SVSRLYAFGIG 234
           +  +L +FG G
Sbjct: 323 TSGQLLSFGRG 333



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 136/284 (47%), Gaps = 38/284 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLG--LESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           G  H+L L D G V + G ++ GQLG  L S  +K    P+ ++ L +  VV    G   
Sbjct: 45  GERHTLLLRDDGGVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKE- 103

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                      HSLA+ + G V++WG  T GQLG  + +   + IPK +  L+   V+Q 
Sbjct: 104 -----------HSLAVCNKGRVYSWGAGTFGQLG--TGELGDRLIPKTINALSKYKVIQV 150

Query: 121 CAGYSHCLVLTSSGVV----TCTHKENGCGSD------PSQ-----GVQSNLVQDSHTTI 165
             G+ H + LT+ G +       H + G G D      P Q     G+    V       
Sbjct: 151 ACGHDHSIALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHS 210

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTT--VTKPQRVESLVNLPIALIACGANHSFVLSK 223
            +L+  G +Y WG N   Q+G++ +     + KP  + +L +L +A ++CGA H+ VL++
Sbjct: 211 FALSLSGVVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQ 270

Query: 224 SVSRLYAFGIGSAVQL--DSPKSVHKTPQLIHGPWIASPVAMTA 265
           + S +Y FG  SA QL  +S  S    PQ +   WI  PV++ A
Sbjct: 271 NGS-VYTFGDDSAGQLGRNSSSSPKFGPQKVE--WIDGPVSLLA 311



 Score = 83.6 bits (205), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 1/95 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y    S +WF       +N  +L G LCGLA++N  I  +PFPLA +KK+LD+  
Sbjct: 792 YGMFMYPHPSSPMWFCTRKKVSKNKYYLFGILCGLAMFNRVIAYVPFPLAAFKKLLDKKP 851

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L DLK+L P L +SLQ +LDY   D+E+ F + F
Sbjct: 852 TLDDLKELDPVLGRSLQAVLDYECDDIEENFQLCF 886



 Score = 48.5 bits (114), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 13/102 (12%)

Query: 989  VEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE-DAGGVRREF 1047
            + V R N+VE+T+ +L+            V D S + +   V+F GE +  +AGGV  EF
Sbjct: 732  LRVQRQNLVENTLHKLSH-----------VEDIS-LKMQLLVEFEGEMSRFEAGGVLLEF 779

Query: 1048 LMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
               + ++++ P YGMF     +  +WF       +N Y+L G
Sbjct: 780  FSHVFEDMVQPDYGMFMYPHPSSPMWFCTRKKVSKNKYYLFG 821


>gi|194383016|dbj|BAG59064.1| unnamed protein product [Homo sapiens]
          Length = 494

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 143/273 (52%), Gaps = 48/273 (17%)

Query: 827  RLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNETLTSSISAGGR 886
            +L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N +           
Sbjct: 2    KLVNLYKGAVLYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNLKV---------- 48

Query: 887  TVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRD-------FLC 939
                         + V Y  FY+P+++ + DI+ DY  W   +     R         LC
Sbjct: 49   -------------KHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKARPSIIQDTVTLC 95

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLNQYLEVEVSRDNI 996
            +YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    + +L + V R+N+
Sbjct: 96   SYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRNNL 155

Query: 997  VEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEIL 1056
            V D +R+L+ ++  D KKPLKV             F GEEA DAGGV +EF +LLLKE+L
Sbjct: 156  VGDALRDLSIHSDIDLKKPLKV------------IFDGEEAVDAGGVTKEFFLLLLKELL 203

Query: 1057 DPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +P YGMF  Y+++  +WFS+  F + N + LIG
Sbjct: 204  NPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 236



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 207 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 266

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 267 GLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 301


>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
 gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
          Length = 1003

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 125/255 (49%), Gaps = 56/255 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+A+   G+VF WG  + GQLG+    K+   +P ++K LA + ++Q   G+    
Sbjct: 82  GKEHSVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMPTKIKALAGIKIIQVSCGH---- 136

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL++ G VF+WG ++ GQLGL   + +SQ+IP++VK L  + + Q  A
Sbjct: 137 --------YHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQAIPQKVKSLEGIPLAQVAA 187

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H   L+ +G                                        + WG+N  
Sbjct: 188 GGTHSFALSLTGTS--------------------------------------FGWGSNRS 209

Query: 183 GQMGI--NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           GQ+ +  N     + KP  + +L NL +  I+CG  H+ VL++   +++ FG  S+ QL 
Sbjct: 210 GQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEE-GQVFTFGGNSSGQLQ 268

Query: 241 -SPKSVHKTPQLIHG 254
            SP+S  + PQLI G
Sbjct: 269 PSPRSGQRGPQLIEG 283



 Score = 99.8 bits (247), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 39/258 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL++ G VF+WG ++ GQLGL   + +SQ+IP++VK L  + + Q  AG +H  
Sbjct: 135 GHYHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQAIPQKVKSLEGIPLAQVAAGGTH-- 191

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQA 120
                     S AL+  G  F WG +  GQL L S +K  + I  P  +  L ++SV+  
Sbjct: 192 ----------SFALSLTGTSFGWGSNRSGQLAL-SGNKVKEQIYKPHSIGALKNLSVIYI 240

Query: 121 CAGYSHCLVLT-----------SSGVVTCTHKENGCGSDPSQGVQSNLVQ---DSHTTIT 166
             GY H  VLT           SSG +  + +    G    +G+   + Q    S+ TI 
Sbjct: 241 SCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIA 300

Query: 167 SLNSPGELYTWG-------NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
            + + G++ + G       N  + +    NS+ T       E LV++ +  I  GA+ +F
Sbjct: 301 YVYTTGQVVSLGRGPSHTSNPTHQEAPAENSDITCLLA--AEDLVDIEVKDIFAGAHANF 358

Query: 220 VLSKSVSRLYAFGIGSAV 237
           V ++ VS   + G+   +
Sbjct: 359 VTTRRVSHTRSTGVSMKI 376



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 56/254 (22%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L     V++ G ++ GQLG +  D+ ++  P+ ++ L  + V     G  H 
Sbjct: 29  SGEHHSLLLFSNHRVYSCGDNSWGQLG-QRRDQSTER-PEPIQALNDLHVDLVSCGKEH- 85

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      S+A+   G+VF WG  + GQLG+    K+   +P ++K LA + ++Q  
Sbjct: 86  -----------SVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMPTKIKALAGIKIIQVS 133

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H L L+  G V                                      ++WG N 
Sbjct: 134 CGHYHSLALSEDGHV--------------------------------------FSWGRNS 155

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
            GQ+G+  ++ +   PQ+V+SL  +P+A +A G  HSF LS + +   +FG GS      
Sbjct: 156 EGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGT---SFGWGSNRSGQL 212

Query: 242 PKSVHKTPQLIHGP 255
             S +K  + I+ P
Sbjct: 213 ALSGNKVKEQIYKP 226



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 60/83 (72%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKD 785
           E+  S+WF  +   +++  FL G LCGL+++N  +IN+PFPLALYKK+L++   L+DLK+
Sbjct: 726 EKGSSMWFPVNPKFEKSSYFLFGILCGLSLHNLKVINLPFPLALYKKLLNQKPSLEDLKE 785

Query: 786 LSPTLAKSLQDILDYREPDLEDV 808
           LS  L ++LQ++L+    D+E++
Sbjct: 786 LSLPLGRNLQEVLNCEAGDIEEL 808



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 24/154 (15%)

Query: 936  DFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDN 995
            DFL    F+FD  +K  L++ D  +++   M++   +    +  P     YL ++V R +
Sbjct: 619  DFL----FVFDLPSKIKLMKCDSFVKL---MSEVMAFPEKMSSPP-----YLILKVRRSH 666

Query: 996  IVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEI 1055
            +VEDT+R+L Q    D +K L V             F  E   +AGGV  EF   + +E+
Sbjct: 667  LVEDTLRQLRQVEDFDLRKQLSVG------------FINEIRPEAGGVSSEFFHCIFEEM 714

Query: 1056 LDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             DPKY MF   E+  S+WF  +   +++ YFL G
Sbjct: 715  TDPKYEMFIYPEKGSSMWFPVNPKFEKSSYFLFG 748


>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
           [Cricetulus griseus]
          Length = 887

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 125/255 (49%), Gaps = 56/255 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+A+   G VF WG  + GQLG+    K+   +P R+K L  + ++Q   G+    
Sbjct: 81  GKEHSIAVCHKGRVFAWGAGSEGQLGI-GEFKEINLMPMRIKTLGGIKIIQVSCGH---- 135

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL++ G+VF+WG ++ GQLGL      SQ+ P++V  L  + + Q  A
Sbjct: 136 --------YHSLALSEDGQVFSWGKNSQGQLGL-GMQSSSQASPQKVTSLEGIPLAQVAA 186

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH   L+ +G                                        Y WG+N  
Sbjct: 187 GGSHSFALSLTGTS--------------------------------------YGWGSNSV 208

Query: 183 GQMGINNSNTTV--TKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL- 239
           GQ+ ++  N+TV  +KP  +++L NL +  I+CG  H+ VL+K   +++ FG  S+ QL 
Sbjct: 209 GQLALSGENSTVQISKPHSIDALKNLGVIYISCGYEHTAVLTKD-GQVFTFGDNSSGQLQ 267

Query: 240 DSPKSVHKTPQLIHG 254
           ++P+   + PQL+ G
Sbjct: 268 NNPRGKRRGPQLVEG 282



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 107/254 (42%), Gaps = 63/254 (24%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L     V++ G ++ GQLG +      Q  P +  G   + +V         
Sbjct: 28  SGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQALGTLDIDLV--------- 78

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                + G  HS+A+   G VF WG  + GQLG+    K+   +P R+K L  + ++Q  
Sbjct: 79  -----SCGKEHSIAVCHKGRVFAWGAGSEGQLGI-GEFKEINLMPMRIKTLGGIKIIQVS 132

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H L L+  G                                      ++++WG N 
Sbjct: 133 CGHYHSLALSEDG--------------------------------------QVFSWGKNS 154

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL----------SKSVSRLYAF 231
            GQ+G+   +++   PQ+V SL  +P+A +A G +HSF L          S SV +L   
Sbjct: 155 QGQLGLGMQSSSQASPQKVTSLEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLALS 214

Query: 232 GIGSAVQLDSPKSV 245
           G  S VQ+  P S+
Sbjct: 215 GENSTVQISKPHSI 228



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 154/397 (38%), Gaps = 84/397 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL++ G+VF+WG ++ GQLGL      SQ+ P++V  L  + + Q  AG S   
Sbjct: 134 GHYHSLALSEDGQVFSWGKNSQGQLGL-GMQSSSQASPQKVTSLEGIPLAQVAAGGS--- 189

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQAC 121
                    HS AL+  G  + WG ++ GQL L   +   Q S P  +  L ++ V+   
Sbjct: 190 ---------HSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKNLGVIYIS 240

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            GY H  VLT                                        G+++T+G+N 
Sbjct: 241 CGYEHTAVLTKD--------------------------------------GQVFTFGDNS 262

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
            GQ+  NN       PQ VE +    ++ I CG+ H+          Y +  G  V L  
Sbjct: 263 SGQLQ-NNPRGKRRGPQLVEGIKG-QVSKIECGSYHTIA--------YVYTTGQVVSLGH 312

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVL 301
                  P     P  +S +        LV     + VK I++G   +  T  + S    
Sbjct: 313 GPRPTSNPTHQKAPAESSDIICLLSAADLVD----VKVKDIFAGAYANFATTHRVSHARS 368

Query: 302 SDDFRVLNPATQILDVNFER---LKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNG 358
                 + P    ++ +  +     +  +E+ + K +  L          +F S  C+  
Sbjct: 369 KSVSMKILPEISRINQSLAKKWIAAKINKELAEAKREINL----------IFSSSACLTA 418

Query: 359 SFLQVEN--DEHF---SCNSKKFSFIKLSLINWFMKL 390
           SFL+  +  +E+F        +  F KL+ + W   L
Sbjct: 419 SFLKKRDTREENFVDVDLTMARNVFKKLTAVKWISPL 455



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 59/84 (70%), Gaps = 2/84 (2%)

Query: 726 EETRSIWFSED-TFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLK 784
           E++  +WF  +  FE+++  F  G LCGL++ N  ++N+PFPLALYKK+L +   L+DLK
Sbjct: 610 EKSSCMWFPVNPKFENKDY-FFFGVLCGLSLSNVKVVNLPFPLALYKKLLKQKPSLEDLK 668

Query: 785 DLSPTLAKSLQDILDYREPDLEDV 808
           +LS  L KSLQ++L+    D+E++
Sbjct: 669 ELSFPLGKSLQEVLNCEAGDVEEL 692



 Score = 41.2 bits (95), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 1029 QVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSED-TFEDQNMYFL 1087
            +V+F  E   +AGGV  EF   + +E+  PKY MF   E++  +WF  +  FE+++ +F 
Sbjct: 572  KVEFIKEICFEAGGVTSEFFHCIFEEMTAPKYEMFMYPEKSSCMWFPVNPKFENKDYFFF 631


>gi|170578406|ref|XP_001894395.1| hypothetical protein [Brugia malayi]
 gi|158599034|gb|EDP36761.1| conserved hypothetical protein [Brugia malayi]
          Length = 988

 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 148/341 (43%), Gaps = 100/341 (29%)

Query: 811  ITFRNWYLLMSDDYFERLILIFKQCLIYLLQ-QPGVVDSTNGDITFNRKLSFCLQVLQKL 869
            +    W+ L+   +F RL+L   + L  L++ +P    +          + FC  +L +L
Sbjct: 498  VYLEKWWSLLERRHFNRLVLALVKALEQLVEHEPNNTSNV---------VPFC-SILSRL 547

Query: 870  NSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGR 929
            N++N                          + +AY  FY+ +L    D+  D    ++G 
Sbjct: 548  NAINRSQ-----------------------KLIAYDKFYLNNLQKKVDMAND----LAGW 580

Query: 930  PNGSTRD--FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYL--FLQTFNPHTLNQ 985
               +  D  +  NYPF+ +A  KT LL+++  IQM+ +M+ +   +  F  +  PH    
Sbjct: 581  EFNAQHDVFYWSNYPFLLNADLKTYLLQLEAHIQMQISMSTSGIMILPFNISLQPHP--- 637

Query: 986  YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
            + E+ V RDNIV+D +  L      D KKPLKV             F GEEA+DAGGV++
Sbjct: 638  FFEISVHRDNIVDDAMIALLSSKHMDLKKPLKV------------YFIGEEADDAGGVKK 685

Query: 1046 EFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFK 1105
            EF MLL +E+L  KYGMF E EE+  IWFS             G E  P ++        
Sbjct: 686  EFFMLLFQELLQAKYGMFTENEESHLIWFS-------------GVETDPLSFK------- 725

Query: 1106 EYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYT-VRFP 1145
                                  L+G LC LAIYN   V FP
Sbjct: 726  ----------------------LVGMLCALAIYNSVLVDFP 744



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 174/389 (44%), Gaps = 78/389 (20%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS+A++D G +F WG ++HGQL + S D  +   PKRV  L     VQ   G SH 
Sbjct: 107 AGRSHSMAVSDDGRLFAWGSNSHGQLAM-SGDILASDTPKRVPSLPET--VQVACGASH- 162

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      +++LN  G VF WG         + +D + +  P  V+   S+ +VQ  
Sbjct: 163 -----------TVSLNGGGRVFIWG---------QQSDGRIRHSPAEVEIFISIPIVQIS 202

Query: 122 AGYSHCLVLTSSGVVTC------------THKE--NGCGSDPSQGVQSNLVQDSHTTITS 167
           AG    + LT+SG +              T+K+  N C       V +    DSH+   +
Sbjct: 203 AGNLFTMALTASGTLFAWGKNEEGQLGDFTNKDVVNPCAVPNINSVVAVECGDSHSI--A 260

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G +++ G++ +GQ+G    N +    + +  ++   +  IACG  H+ V++    +
Sbjct: 261 LTHEGRVFSCGSDSFGQLGCGQPNRSQNCMRGITEMLGSHVTRIACGRCHTIVVAN--GK 318

Query: 228 LYAFGIGSAVQLDSPKSVHK-TPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           ++ FG+ S  QL    + ++ TP++I               DS+ +      V  +++G 
Sbjct: 319 MHTFGLNSNGQLGHGNTRNQITPRVI---------------DSVEN------VASVFAGW 357

Query: 287 DHS--IVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLL 344
           D S  +   TK +  VLS     L     +   + +R+++     ++L         ++ 
Sbjct: 358 DQSFCLQIHTKHAYDVLSGPSSYLQKPKYL---SLQRIRDLFAVGDKLT--------IIG 406

Query: 345 YLETVFLSPGCMNGSFLQVENDEHFSCNS 373
            LE+VF S   +N SFL  EN++ + C++
Sbjct: 407 ELESVFSSLSSINASFL-YENEKKYRCSA 434



 Score = 98.2 bits (243), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/105 (49%), Positives = 70/105 (66%), Gaps = 4/105 (3%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCF-LIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
           YG+ TE EE+  IWFS    E   + F L+G LC LAIYN  +++ PFPLALYKKILD P
Sbjct: 700 YGMFTENEESHLIWFS--GVETDPLSFKLVGMLCALAIYNSVLVDFPFPLALYKKILDVP 757

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSD 822
           + L+DL +LSP   +SL+ +LDY + D+E+VF + F     L+ D
Sbjct: 758 LELEDLSELSPAEGRSLRSLLDYEDDDIEEVFSLKFMISVSLLGD 802



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 122/246 (49%), Gaps = 29/246 (11%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLASVSVVQACAGYSH 60
           +G  H+L L+D G+V++ G + +G+LG     + S +I P  +   ++VS++Q  AG SH
Sbjct: 54  SGERHTLFLSDDGKVWSCGSNYNGELGRGGVREGSYTIYPVHIS--STVSIIQISAGRSH 111

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                       S+A++D G +F WG ++HGQL + S D  +   PKRV  L     VQ 
Sbjct: 112 ------------SMAVSDDGRLFAWGSNSHGQLAM-SGDILASDTPKRVPSLP--ETVQV 156

Query: 121 CAGYSHCLVLTSSGVVTC--THKENGCGSDPSQG---VQSNLVQDSHTTI--TSLNSPGE 173
             G SH + L   G V       +      P++    +   +VQ S   +   +L + G 
Sbjct: 157 ACGASHTVSLNGGGRVFIWGQQSDGRIRHSPAEVEIFISIPIVQISAGNLFTMALTASGT 216

Query: 174 LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
           L+ WG NE GQ+G + +N  V  P  V ++ +  +  + CG +HS  L+    R+++ G 
Sbjct: 217 LFAWGKNEEGQLG-DFTNKDVVNPCAVPNINS--VVAVECGDSHSIALTHE-GRVFSCGS 272

Query: 234 GSAVQL 239
            S  QL
Sbjct: 273 DSFGQL 278



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 133/296 (44%), Gaps = 51/296 (17%)

Query: 16  VFTWGGDTHGQLGLE----SADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLW 71
           VF   GD  GQLG       +D +   +P+ V G        A    +  +V +  +G  
Sbjct: 8   VFGCAGD--GQLGFRPDSVESDAQMMIVPRLVYG--------APTRQNGVIVKSIASGER 57

Query: 72  HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLASVSVVQACAGYSHCLVL 130
           H+L L+D G+V++ G + +G+LG     + S +I P  +   ++VS++Q  AG SH + +
Sbjct: 58  HTLFLSDDGKVWSCGSNYNGELGRGGVREGSYTIYPVHIS--STVSIIQISAGRSHSMAV 115

Query: 131 TSSGVV----TCTHKE-----NGCGSDPSQGVQS--NLVQ----DSHTTITSLNSPGELY 175
           +  G +    + +H +     +   SD  + V S    VQ     SHT   SLN  G ++
Sbjct: 116 SDDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLPETVQVACGASHT--VSLNGGGRVF 173

Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
            WG    G++           P  VE  +++PI  I+ G   +  L+ S   L+A+G   
Sbjct: 174 IWGQQSDGRIR--------HSPAEVEIFISIPIVQISAGNLFTMALTAS-GTLFAWGKNE 224

Query: 236 AVQL-DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVK-KIYSGGDHS 289
             QL D        P  +  P I S VA+  G+    SHS  L  + +++S G  S
Sbjct: 225 EGQLGDFTNKDVVNPCAV--PNINSVVAVECGD----SHSIALTHEGRVFSCGSDS 274


>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
          Length = 926

 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 125/255 (49%), Gaps = 56/255 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+A+   G+VF WG  + GQLG+    K+   +P ++K LA + ++Q   G+    
Sbjct: 82  GKEHSVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMPTKIKALAGIKIIQVSCGH---- 136

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL++ G VF+WG ++ GQLGL   + +SQ+IP++VK L  + + Q  A
Sbjct: 137 --------YHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQAIPQKVKSLEGIPLAQVAA 187

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H   L+ +G                                        + WG+N  
Sbjct: 188 GGTHSFALSLTGTS--------------------------------------FGWGSNRS 209

Query: 183 GQMGI--NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           GQ+ +  N     + KP  + +L NL +  I+CG  H+ VL++   +++ FG  S+ QL 
Sbjct: 210 GQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEE-GQVFTFGGNSSGQLQ 268

Query: 241 -SPKSVHKTPQLIHG 254
            SP+S  + PQLI G
Sbjct: 269 PSPRSGQRGPQLIEG 283



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 39/258 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL++ G VF+WG ++ GQLGL   + +SQ+IP++VK L  + + Q  AG +H  
Sbjct: 135 GHYHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQAIPQKVKSLEGIPLAQVAAGGTH-- 191

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQA 120
                     S AL+  G  F WG +  GQL L S +K  + I  P  +  L ++SV+  
Sbjct: 192 ----------SFALSLTGTSFGWGSNRSGQLAL-SGNKVKEQIYKPHSIGALKNLSVIYI 240

Query: 121 CAGYSHCLVLT-----------SSGVVTCTHKENGCGSDPSQGVQSNLVQ---DSHTTIT 166
             GY H  VLT           SSG +  + +    G    +G+   + Q    S+ TI 
Sbjct: 241 SCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIA 300

Query: 167 SLNSPGELYTWG-------NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
            + + G++ + G       N  + +    NS+ T       E LV++ +  I  GA+ +F
Sbjct: 301 YVYTTGQVVSLGRGPSHTSNPTHQEAPAENSDITCLLA--AEDLVDIEVKDIFAGAHANF 358

Query: 220 VLSKSVSRLYAFGIGSAV 237
           V ++ VS   + G+   +
Sbjct: 359 VTTRRVSHTRSTGVSMKI 376



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 56/254 (22%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L     V++ G ++ GQLG +  D+ ++  P+ ++ L  + V     G  H 
Sbjct: 29  SGEHHSLLLFSNHRVYSCGDNSWGQLG-QRRDQSTER-PEPIQALNDLHVDLVSCGKEH- 85

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      S+A+   G+VF WG  + GQLG+    K+   +P ++K LA + ++Q  
Sbjct: 86  -----------SVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMPTKIKALAGIKIIQVS 133

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H L L+  G V                                      ++WG N 
Sbjct: 134 CGHYHSLALSEDGHV--------------------------------------FSWGRNS 155

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
            GQ+G+  ++ +   PQ+V+SL  +P+A +A G  HSF LS + +   +FG GS      
Sbjct: 156 EGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGT---SFGWGSNRSGQL 212

Query: 242 PKSVHKTPQLIHGP 255
             S +K  + I+ P
Sbjct: 213 ALSGNKVKEQIYKP 226



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 60/83 (72%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKD 785
           E+  S+WF  +   +++  FL G LCGL+++N  +IN+PFPLALYKK+L++   L+DLK+
Sbjct: 726 EKGSSMWFPVNPKFEKSSYFLFGILCGLSLHNLKVINLPFPLALYKKLLNQKPSLEDLKE 785

Query: 786 LSPTLAKSLQDILDYREPDLEDV 808
           LS  L ++LQ++L+    D+E++
Sbjct: 786 LSLPLGRNLQEVLNCEAGDIEEL 808



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 24/154 (15%)

Query: 936  DFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDN 995
            DFL    F+FD  +K  L++ D  +++   M++   +    +  P     YL ++V R +
Sbjct: 619  DFL----FVFDLPSKIKLMKCDSFVKL---MSEVMAFPEKMSSPP-----YLILKVRRSH 666

Query: 996  IVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEI 1055
            +VEDT+R+L Q    D +K L V             F  E   +AGGV  EF   + +E+
Sbjct: 667  LVEDTLRQLRQVEDFDLRKQLSVG------------FINEIRPEAGGVSSEFFHCIFEEM 714

Query: 1056 LDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             DPKY MF   E+  S+WF  +   +++ YFL G
Sbjct: 715  TDPKYEMFIYPEKGSSMWFPVNPKFEKSSYFLFG 748


>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
           africana]
          Length = 1018

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 181/412 (43%), Gaps = 63/412 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K+    P +VK LA + ++Q   G+    
Sbjct: 81  GKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKELNFTPMKVKALAGIKIIQVSCGH---- 135

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+  G+VF+WG ++HGQLGL   +  SQ  P+RVK L  + + Q  A
Sbjct: 136 --------YHSLALSQDGQVFSWGNNSHGQLGL-GKEFLSQESPQRVKSLEGIPLAQVAA 186

Query: 123 GYSHCLVLTSSG-------------------VVTCTHKENGCGSDPSQGVQSNLVQDSHT 163
           G +H   L+ SG                   V   ++K    G+    GV        HT
Sbjct: 187 GGAHSFALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHT 246

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            +  L   G+++T+G+N  GQ+G +        PQ VE +  L ++ I CG+ H+ V   
Sbjct: 247 AV--LTQDGKVFTFGDNSSGQLG-HGPTAEKRGPQLVEGIDGL-VSQIDCGSYHTLVYVY 302

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
           +  ++ +FG G +    S +S   T          S V+     D LV+    + VK I+
Sbjct: 303 TTRQVISFGRGPSDTTSSTRSDALTKN--------SDVSCLISADDLVN----VQVKHIF 350

Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLL 343
           +G   + VT  + +    S   + L   ++I     ++    ER  E     E    ++ 
Sbjct: 351 AGTYANFVTTYQDATST-SVSRKTLPEISRINQPLIKKWIAVERSTEH----EVAKSEIR 405

Query: 344 LYLETVFLSPGCMNGSFL-QVENDEHFSCN----SKKFSFIKLSLINWFMKL 390
           +    +F SP C+  SF  + E  E  S +      + +F KL+   W   L
Sbjct: 406 M----IFSSPACLTASFFNKSETGETISIDMALQMARNTFKKLTKKEWISSL 453



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 129/272 (47%), Gaps = 36/272 (13%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV-VQACAGYSH 60
           +G  HSL L   G V   G ++ GQLG      + +  P  ++ L +++V + +C     
Sbjct: 28  SGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKR--PGLIQALETLNVDLLSC----- 80

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                   G  HSLA+   G VF WG  + GQLG+    K+    P +VK LA + ++Q 
Sbjct: 81  --------GKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKELNFTPMKVKALAGIKIIQV 131

Query: 121 CAGYSHCLVLTSSGVV----TCTHKENGCGSD------PS-----QGVQSNLVQDSHTTI 165
             G+ H L L+  G V      +H + G G +      P      +G+    V       
Sbjct: 132 SCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHS 191

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVT--KPQRVESLVNLPIALIACGANHSFVLSK 223
            +L+  G  + WG+N  GQ+ ++ +N  V   KP+ + +L  L +  I+CG+ H+ VL++
Sbjct: 192 FALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQ 251

Query: 224 SVSRLYAFGIGSAVQL-DSPKSVHKTPQLIHG 254
              +++ FG  S+ QL   P +  + PQL+ G
Sbjct: 252 D-GKVFTFGDNSSGQLGHGPTAEKRGPQLVEG 282



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 60/92 (65%), Gaps = 1/92 (1%)

Query: 719 HYGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            YG+  Y E+   +WF      ++N  FL G LCGL+ ++  + N+PFPLAL+KK+L + 
Sbjct: 729 EYGMFMYPEDGAYMWFPAKPKFEKNRYFLFGILCGLSFFHLNVANIPFPLALFKKLLGQK 788

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVF 809
             L+DLK+LSP   K+LQ++L+    DLE+++
Sbjct: 789 PSLEDLKELSPLFEKNLQEVLNDEADDLEELY 820



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 24/195 (12%)

Query: 905  TAFYMPDLATVCDIRIDYFRWISGRPNGSTRD-----FLCNYPFIFDAKAKTTLLEMDQR 959
             AF + +L    D  +D  R      N    D        ++PF+F+  +K  L   D  
Sbjct: 579  NAFNIDELTNSLDFVVDRARVFFRSKNLVPADNISPVIFSDFPFVFNFLSKMKLFTADSF 638

Query: 960  IQMEHAMNQTNFYLFLQTFNPHTLNQY-----LEVEVSRDNIVEDTIRELAQYTTNDFKK 1014
            I+M+   +Q   +L +   +    +++      ++ V R+++VED +R+L+Q   ND  K
Sbjct: 639  IKMQ--ASQKKQFLKIHDLSLQRKSEFPSPPQFKLRVRRNHLVEDALRQLSQAEVNDLSK 696

Query: 1015 PLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWF 1074
             L +            +F  E    AGGV+ EF   + +E+  P+YGMF   E+   +WF
Sbjct: 697  ELVI------------EFIEEITSVAGGVKSEFFHCVFEEMTKPEYGMFMYPEDGAYMWF 744

Query: 1075 SEDTFEDQNMYFLIG 1089
                  ++N YFL G
Sbjct: 745  PAKPKFEKNRYFLFG 759


>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
           jacchus]
          Length = 1006

 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 169/395 (42%), Gaps = 107/395 (27%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEINFTPKKITTLTGIKIIQVSCGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   +VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + V Q  A
Sbjct: 138 --------YHSLALSKDSQVFSWGKNSHGQLGL-GKELSSQASPQRVRSLEGIPVAQVAA 188

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H   L+             CG+                           + WG+N  
Sbjct: 189 GGAHSFALSL------------CGTS--------------------------FGWGSNSA 210

Query: 183 GQMGINNSNTTV--TKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           GQ+ ++  N  V   KP  + +L NL +  I+CG  H+ VLS+   +++ FG  S+ QL 
Sbjct: 211 GQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQD-GKVFTFGDNSSGQL- 268

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV 300
                + TP+   GP I   +      D LVS        +I  GGDH+I  V  +   V
Sbjct: 269 ---GYNPTPK-KRGPQIVERI------DGLVS--------QIDCGGDHTIAYVHTTGQVV 310

Query: 301 L-----SD--------------DFRVLNPATQILDVNFERL------------KECEREV 329
                 SD              D R L  A  ++DV  + +            + C+  V
Sbjct: 311 SFGHGPSDTSKPTHPEALKENFDIRCLISADDLVDVQVKHIFAGKYANFVTTHQNCQGRV 370

Query: 330 EQLKSDETLDQDLLLYLET--VFLSPGCMNGSFLQ 362
            ++   E L +    ++E   +F SP C+  SFL+
Sbjct: 371 SEMSYRECLLEWKEGHVEVRMIFSSPACLTASFLK 405



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 57/88 (64%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKD 785
           E+   +WF      ++   FL G LCGL+++N  + N+PFPLALYKK+L++   L+DLK+
Sbjct: 722 EKGSCMWFPAKPKLEKKRYFLFGMLCGLSLFNLNLANLPFPLALYKKLLNQKPSLEDLKE 781

Query: 786 LSPTLAKSLQDILDYREPDLEDVFGITF 813
           LSP L KSLQ++L+    D+ D   + F
Sbjct: 782 LSPQLGKSLQEVLNDDADDIGDALCLHF 809



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 15/153 (9%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYL---FLQTFNPHTLNQYLEVEVSRDNI 996
            ++PFIF+  +K  LL+ D  ++M  +  +   ++    L+       +    + V + ++
Sbjct: 604  DFPFIFNLLSKIKLLQADSHLKMWMSEGKAFMHMHETILKKKEEFPPSPTFILRVRQSHL 663

Query: 997  VEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEIL 1056
            VED +R+L+Q    DF K L             V+F  E   +AGGV  EF   + +E+ 
Sbjct: 664  VEDALRQLSQAEATDFCKVL------------VVEFIKEIRPEAGGVSSEFFYCIFEEMT 711

Query: 1057 DPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             PKY MF   E+   +WF      ++  YFL G
Sbjct: 712  KPKYRMFMYPEKGSCMWFPAKPKLEKKRYFLFG 744


>gi|74140640|dbj|BAB27358.3| unnamed protein product [Mus musculus]
          Length = 576

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 125/255 (49%), Gaps = 56/255 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+A+   G+VF WG  + GQLG+    K+   +P ++K LA + ++Q   G+    
Sbjct: 9   GKEHSVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMPTKIKALAGIKIIQVSCGH---- 63

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL++ G VF+WG ++ GQLGL   + +SQ+IP++VK L  + + Q  A
Sbjct: 64  --------YHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQAIPQKVKSLEGIPLAQVAA 114

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H   L+ +G                                        + WG+N  
Sbjct: 115 GGTHSFALSLTGTS--------------------------------------FGWGSNRS 136

Query: 183 GQMGI--NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           GQ+ +  N     + KP  + +L NL +  I+CG  H+ VL++   +++ FG  S+ QL 
Sbjct: 137 GQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEE-GQVFTFGGNSSGQLQ 195

Query: 241 -SPKSVHKTPQLIHG 254
            SP+S  + PQLI G
Sbjct: 196 PSPRSGQRGPQLIEG 210



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 42/189 (22%)

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
           + G  HS+A+   G+VF WG  + GQLG+    K+   +P ++K LA + ++Q   G+ H
Sbjct: 7   SCGKEHSVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMPTKIKALAGIKIIQVSCGHYH 65

Query: 127 CLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG 186
            L L+  G V                                      ++WG N  GQ+G
Sbjct: 66  SLALSEDGHV--------------------------------------FSWGRNSEGQLG 87

Query: 187 INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH 246
           +  ++ +   PQ+V+SL  +P+A +A G  HSF LS + +   +FG GS        S +
Sbjct: 88  LGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGT---SFGWGSNRSGQLALSGN 144

Query: 247 KTPQLIHGP 255
           K  + I+ P
Sbjct: 145 KVKEQIYKP 153


>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
          Length = 1016

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 174/383 (45%), Gaps = 67/383 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K++  IPK++K LA + ++Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGI-GEFKETTFIPKKIKTLAGIKIIQVACGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HS+AL++ G+VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 138 --------YHSVALSEDGQVFSWGTNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 123 GYSHCLVLTSSGVV-------------------TCTHKENGCGSDPSQGVQSNLVQDSHT 163
           G  H   L+ SG                        +K    G+  + GV S      HT
Sbjct: 189 GGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHT 248

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            +  L   G+++T+G+N YGQ+G ++       PQ VE +  L ++ I CG++H+     
Sbjct: 249 AV--LTQDGKVFTFGDNSYGQLG-HDPTAEKRGPQLVERIEGL-VSQIDCGSDHTLAYIY 304

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHS--GGLVVKK 281
           +  ++ +FG G       P    ++P          P A ++    LVS      + VK 
Sbjct: 305 TTGQVVSFGRG-------PGCASRSPH---------PGAESSDISCLVSAKDLADVQVKH 348

Query: 282 IYSGGDHSIV--TVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLD 339
           I++G   + V  +   SS  V       ++   Q L   +  + +   E E  KS+    
Sbjct: 349 IFAGTYANFVTTSQDTSSTSVPRKTLPEISRINQSLTEKWMAVAKRSIEDEVAKSE---- 404

Query: 340 QDLLLYLETVFLSPGCMNGSFLQ 362
                 +  +F SP C+  SFL+
Sbjct: 405 ------IRVIFSSPACLTASFLK 421



 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 140/566 (24%), Positives = 238/566 (42%), Gaps = 127/566 (22%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L   G V + G ++ GQLG +   +  Q  P+R+  L +++V     G  H 
Sbjct: 30  SGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQ--PERIPALETLNVALVSCGKEH- 86

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      SLA+   G VF WG  + GQLG+    K++  IPK++K LA + ++Q  
Sbjct: 87  -----------SLAVCHKGRVFAWGAASEGQLGI-GEFKETTFIPKKIKTLAGIKIIQVA 134

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H + L+  G                                      ++++WG N 
Sbjct: 135 CGHYHSVALSEDG--------------------------------------QVFSWGTNS 156

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL-- 239
           +GQ+G+     +   PQRV SL  +P+A +A G +HSF LS S +  + +G  SA QL  
Sbjct: 157 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTS-FGWGSNSAGQLAL 215

Query: 240 ---DSPKSVHKTPQLIHGPWIASPVAMTAG--EDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
              ++P   +K P  I        V+++ G    ++++  G     K+++ GD+S     
Sbjct: 216 SGNNAPVQRYK-PVSIGALKTLGVVSISCGYKHTAVLTQDG-----KVFTFGDNSY---- 265

Query: 295 KSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLS-- 352
               G L  D        Q++    ER++    +++   SD TL     +Y     +S  
Sbjct: 266 ----GQLGHDPTAEKRGPQLV----ERIEGLVSQID-CGSDHTL---AYIYTTGQVVSFG 313

Query: 353 --PGCMNGSFLQVENDEHFSC--NSKKFSFIKLSLINWFMKLHF---------------- 392
             PGC + S          SC  ++K  + +++  I      +F                
Sbjct: 314 RGPGCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGTYANFVTTSQDTSSTSVPRKT 373

Query: 393 --------SIFGQGFGCVCPTVLGDCVPKSWLYLETVFLSPGCMNGSFLQV-ENDEHFSC 443
                       + +  V    + D V KS   +  +F SP C+  SFL+  E  E  S 
Sbjct: 374 LPEISRINQSLTEKWMAVAKRSIEDEVAKS--EIRVIFSSPACLTASFLKKREPGEMISI 431

Query: 444 NSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAILASHAHLVKSLWNTPPDAEALRMF 503
           +     VD+++ +D +  +   E+E + S+++  A L    +L+ +L       EAL +F
Sbjct: 432 D-----VDLEMARDTFKKLT--EKEWISSMIT--ACLKD--NLLGALPCHSSHQEALSVF 480

Query: 504 LTLPLYHEFMNPRQHEILHMPFAGAL 529
           L LP     ++ R +  L +PFA A+
Sbjct: 481 LLLPECPVMLDSRNYITLVVPFAEAI 506



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 65/96 (67%), Gaps = 1/96 (1%)

Query: 719 HYGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            YG+  Y EE   +WF      ++ M FL G LCGL++YN+ ++ +PFPLAL+KK+LD+ 
Sbjct: 727 EYGMFMYPEEDSYMWFPVKPKFEKKMYFLFGMLCGLSLYNFNVVYLPFPLALFKKLLDQE 786

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
             L+DLK+LSP+  K LQ++L+    D+++ FG+ F
Sbjct: 787 PSLEDLKELSPSFGKCLQEVLNDDANDIKEEFGLRF 822



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 18/153 (11%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQM--EHAMNQTNFY-LFLQTFNPHTLNQYLEVEVSRDNI 996
            ++PF+F+  +K  LL+ D +I++      N  +F  + LQ  +   L     + V R ++
Sbjct: 620  DFPFVFNLMSKIKLLQADSQIRVLKSEVNNYMDFRGIILQRRDESPL---FTLSVRRSHL 676

Query: 997  VEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEIL 1056
            VED + +L+Q    D +K L V          +++  GE      GV+ EF   + + + 
Sbjct: 677  VEDALCQLSQAEDTDLQKILVVE------FIKEIRSGGE------GVKSEFFHCIFESMT 724

Query: 1057 DPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              +YGMF   EE   +WF      ++ MYFL G
Sbjct: 725  KEEYGMFMYPEEDSYMWFPVKPKFEKKMYFLFG 757


>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
          Length = 1016

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 174/383 (45%), Gaps = 67/383 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K++  IPK++K LA + ++Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGI-GEFKETTFIPKKIKTLAGIKIIQVACGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HS+AL++ G+VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 138 --------YHSVALSEDGQVFSWGTNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 123 GYSHCLVLTSSGVV-------------------TCTHKENGCGSDPSQGVQSNLVQDSHT 163
           G  H   L+ SG                        +K    G+  + GV S      HT
Sbjct: 189 GGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHT 248

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            +  L   G+++T+G+N YGQ+G ++       PQ VE +  L ++ I CG++H+     
Sbjct: 249 AV--LTQDGKVFTFGDNSYGQLG-HDPTAEKRGPQLVERIEGL-VSQIDCGSDHTLAYIY 304

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHS--GGLVVKK 281
           +  ++ +FG G       P    ++P          P A ++    LVS      + VK 
Sbjct: 305 TTGQVVSFGRG-------PGCASRSPH---------PGAESSDISCLVSAKDLADVQVKH 348

Query: 282 IYSGGDHSIV--TVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLD 339
           I++G   + V  +   SS  V       ++   Q L   +  + +   E E  KS+    
Sbjct: 349 IFAGTYANFVTTSQDTSSTSVPRKTLPEISRINQSLTEKWMAVAKRSIEDEVAKSE---- 404

Query: 340 QDLLLYLETVFLSPGCMNGSFLQ 362
                 +  +F SP C+  SFL+
Sbjct: 405 ------IRVIFSSPACLTASFLK 421



 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 140/566 (24%), Positives = 238/566 (42%), Gaps = 127/566 (22%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L   G V + G ++ GQLG +   +  Q  P+R+  L +++V     G  H 
Sbjct: 30  SGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQ--PERIPALETLNVALVSCGKEH- 86

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      SLA+   G VF WG  + GQLG+    K++  IPK++K LA + ++Q  
Sbjct: 87  -----------SLAVCHKGRVFAWGAASEGQLGI-GEFKETTFIPKKIKTLAGIKIIQVA 134

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H + L+  G                                      ++++WG N 
Sbjct: 135 CGHYHSVALSEDG--------------------------------------QVFSWGTNS 156

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL-- 239
           +GQ+G+     +   PQRV SL  +P+A +A G +HSF LS S +  + +G  SA QL  
Sbjct: 157 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTS-FGWGSNSAGQLAL 215

Query: 240 ---DSPKSVHKTPQLIHGPWIASPVAMTAG--EDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
              ++P   +K P  I        V+++ G    ++++  G     K+++ GD+S     
Sbjct: 216 SGNNAPVQRYK-PVSIGALKTLGVVSISCGYKHTAVLTQDG-----KVFTFGDNSY---- 265

Query: 295 KSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLS-- 352
               G L  D        Q++    ER++    +++   SD TL     +Y     +S  
Sbjct: 266 ----GQLGHDPTAEKRGPQLV----ERIEGLVSQID-CGSDHTL---AYIYTTGQVVSFG 313

Query: 353 --PGCMNGSFLQVENDEHFSC--NSKKFSFIKLSLINWFMKLHF---------------- 392
             PGC + S          SC  ++K  + +++  I      +F                
Sbjct: 314 RGPGCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGTYANFVTTSQDTSSTSVPRKT 373

Query: 393 --------SIFGQGFGCVCPTVLGDCVPKSWLYLETVFLSPGCMNGSFLQV-ENDEHFSC 443
                       + +  V    + D V KS   +  +F SP C+  SFL+  E  E  S 
Sbjct: 374 LPEISRINQSLTEKWMAVAKRSIEDEVAKS--EIRVIFSSPACLTASFLKKREPGEMISI 431

Query: 444 NSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAILASHAHLVKSLWNTPPDAEALRMF 503
           +     VD+++ +D +  +   E+E + S+++  A L    +L+ +L       EAL +F
Sbjct: 432 D-----VDLEMARDTFKKLT--EKEWISSMIT--ACLKD--NLLGALPCHSSHQEALSVF 480

Query: 504 LTLPLYHEFMNPRQHEILHMPFAGAL 529
           L LP     ++ R +  L +PFA A+
Sbjct: 481 LLLPECPVMLDSRNYITLVVPFAEAI 506



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 65/96 (67%), Gaps = 1/96 (1%)

Query: 719 HYGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            YG+  Y EE   +WF      ++ M FL G LCGL++YN+ ++ +PFPLAL+KK+LD+ 
Sbjct: 727 EYGMFMYPEEDSYMWFPVKPKFEKKMYFLFGMLCGLSLYNFNVVYLPFPLALFKKLLDQE 786

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
             L+DLK+LSP+  K LQ++L+    D+++ FG+ F
Sbjct: 787 PSLEDLKELSPSFGKCLQEVLNDDVNDIKEEFGLRF 822



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 18/153 (11%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQM--EHAMNQTNFY-LFLQTFNPHTLNQYLEVEVSRDNI 996
            ++PF+F+  +K  LL+ D +I++      N  +F  + LQ  +   L     + V R ++
Sbjct: 620  DFPFVFNLMSKIKLLQADSQIRVLKSEVNNYMDFRGIILQRRDESPL---FTLSVRRSHL 676

Query: 997  VEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEIL 1056
            VED + +L+Q    D +K L V          +++  GE      GV+ EF   + + + 
Sbjct: 677  VEDALCQLSQAEDTDLQKILVVE------FIKEIRSGGE------GVKSEFFHCIFESMT 724

Query: 1057 DPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              +YGMF   EE   +WF      ++ MYFL G
Sbjct: 725  KEEYGMFMYPEEDSYMWFPVKPKFEKKMYFLFG 757


>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
          Length = 980

 Score =  122 bits (307), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 129/259 (49%), Gaps = 37/259 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K++  IPK++K LA + ++Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGI-GEFKETTFIPKKIKTLAGIKIIQVACGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HS+AL++ G+VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 138 --------YHSVALSEDGQVFSWGTNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 123 GYSHCLVLTSSGVV-------------------TCTHKENGCGSDPSQGVQSNLVQDSHT 163
           G  H   L+ SG                        +K    G+  + GV S      HT
Sbjct: 189 GGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHT 248

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            +  L   G+++T+G+N YGQ+G ++       PQ VE +  L ++ I CG++H+     
Sbjct: 249 AV--LTQDGKVFTFGDNSYGQLG-HDPTAEKRGPQLVERIEGL-VSQIDCGSDHTLAYIY 304

Query: 224 SVSRLYAFGIGSAVQLDSP 242
           +  ++ +FG G      SP
Sbjct: 305 TTGQVVSFGRGPGCASRSP 323



 Score =  116 bits (291), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 140/566 (24%), Positives = 238/566 (42%), Gaps = 127/566 (22%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L   G V + G ++ GQLG +   +  Q  P+R+  L +++V     G  H 
Sbjct: 30  SGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQ--PERIPALETLNVALVSCGKEH- 86

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      SLA+   G VF WG  + GQLG+    K++  IPK++K LA + ++Q  
Sbjct: 87  -----------SLAVCHKGRVFAWGAASEGQLGI-GEFKETTFIPKKIKTLAGIKIIQVA 134

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H + L+  G                                      ++++WG N 
Sbjct: 135 CGHYHSVALSEDG--------------------------------------QVFSWGTNS 156

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL-- 239
           +GQ+G+     +   PQRV SL  +P+A +A G +HSF LS S +  + +G  SA QL  
Sbjct: 157 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTS-FGWGSNSAGQLAL 215

Query: 240 ---DSPKSVHKTPQLIHGPWIASPVAMTAG--EDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
              ++P   +K P  I        V+++ G    ++++  G     K+++ GD+S     
Sbjct: 216 SGNNAPVQRYK-PVSIGALKTLGVVSISCGYKHTAVLTQDG-----KVFTFGDNSY---- 265

Query: 295 KSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLS-- 352
               G L  D        Q++    ER++    +++   SD TL     +Y     +S  
Sbjct: 266 ----GQLGHDPTAEKRGPQLV----ERIEGLVSQID-CGSDHTL---AYIYTTGQVVSFG 313

Query: 353 --PGCMNGSFLQVENDEHFSC--NSKKFSFIKLSLINWFMKLHF---------------- 392
             PGC + S          SC  ++K  + +++  I      +F                
Sbjct: 314 RGPGCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGTYANFVTTSQDTSSTSVPRKT 373

Query: 393 --------SIFGQGFGCVCPTVLGDCVPKSWLYLETVFLSPGCMNGSFLQV-ENDEHFSC 443
                       + +  V    + D V KS   +  +F SP C+  SFL+  E  E  S 
Sbjct: 374 LPEISRINQSLTEKWMAVAKRSIEDEVAKS--EIRVIFSSPACLTASFLKKREPGEMISI 431

Query: 444 NSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAILASHAHLVKSLWNTPPDAEALRMF 503
           +     VD+++ +D +  +   E+E + S+++  A L    +L+ +L       EAL +F
Sbjct: 432 D-----VDLEMARDTFKKLT--EKEWISSMIT--ACLKD--NLLGALPCHSSHQEALSVF 480

Query: 504 LTLPLYHEFMNPRQHEILHMPFAGAL 529
           L LP     ++ R +  L +PFA A+
Sbjct: 481 LLLPECPVMLDSRNYITLVVPFAEAI 506



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 65/95 (68%), Gaps = 1/95 (1%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y EE   +WF      ++ M FL G LCGL++YN+ ++ +PFPLAL+KK+LD+  
Sbjct: 692 YGMFMYPEEDSYMWFPVKPKFEKKMYFLFGMLCGLSLYNFNVVYLPFPLALFKKLLDQEP 751

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP+  K LQ++L+    D+++ FG+ F
Sbjct: 752 SLEDLKELSPSFGKCLQEVLNDDVNDIKEEFGLRF 786



 Score = 47.4 bits (111), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 12/101 (11%)

Query: 989  VEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFL 1048
            + V R ++VED + +L+Q    D +K L V          +++  GE      GV+ EF 
Sbjct: 633  LSVRRSHLVEDALCQLSQAEDTDLQKILVVE------FIKEIRSGGE------GVKSEFF 680

Query: 1049 MLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              + + +   +YGMF   EE   +WF      ++ MYFL G
Sbjct: 681  HCIFESMTKEEYGMFMYPEEDSYMWFPVKPKFEKKMYFLFG 721



 Score = 44.7 bits (104), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 4/61 (6%)

Query: 1088 IGKEYVPCTYIS----KYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTVR 1143
            +  E+  C + S    +Y MF   EE   +WF      ++ MYFL G LCGL++YN+ V 
Sbjct: 675  VKSEFFHCIFESMTKEEYGMFMYPEEDSYMWFPVKPKFEKKMYFLFGMLCGLSLYNFNVV 734

Query: 1144 F 1144
            +
Sbjct: 735  Y 735


>gi|74177548|dbj|BAB30989.3| unnamed protein product [Mus musculus]
          Length = 596

 Score =  122 bits (307), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 125/255 (49%), Gaps = 56/255 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+A+   G+VF WG  + GQLG+    K+   +P ++K LA + ++Q   G+    
Sbjct: 39  GKEHSVAVCHKGKVFPWGAGSEGQLGI-GEFKEISFMPTKIKALAGIKIIQVSCGH---- 93

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL++ G VF+WG ++ GQLGL   + +SQ+IP++VK L  + + Q  A
Sbjct: 94  --------YHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQAIPQKVKSLEGIPLAQVAA 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H   L+ +G                                        + WG+N  
Sbjct: 145 GGTHSFALSLTGTS--------------------------------------FGWGSNRS 166

Query: 183 GQMGI--NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           GQ+ +  N     + KP  + +L NL +  I+CG  H+ VL++   +++ FG  S+ QL 
Sbjct: 167 GQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEE-GQVFTFGGNSSGQLQ 225

Query: 241 -SPKSVHKTPQLIHG 254
            SP+S  + PQLI G
Sbjct: 226 PSPRSGQRGPQLIEG 240



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 56/239 (23%)

Query: 17  FTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLAL 76
           ++ G ++ GQLG +  D+ ++  P+ ++ L  + V     G  H            S+A+
Sbjct: 1   YSCGDNSWGQLG-QRRDQSTER-PEPIQALNDLHVDLVSCGKEH------------SVAV 46

Query: 77  NDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV 136
              G+VF WG  + GQLG+    K+   +P ++K LA + ++Q   G+ H L L+  G V
Sbjct: 47  CHKGKVFPWGAGSEGQLGI-GEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHV 105

Query: 137 TCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTK 196
                                                 ++WG N  GQ+G+  ++ +   
Sbjct: 106 --------------------------------------FSWGRNSEGQLGLGKNSRSQAI 127

Query: 197 PQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGP 255
           PQ+V+SL  +P+A +A G  HSF LS + +   +FG GS        S +K  + I+ P
Sbjct: 128 PQKVKSLEGIPLAQVAAGGTHSFALSLTGT---SFGWGSNRSGQLALSGNKVKEQIYKP 183


>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
          Length = 1016

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 163/374 (43%), Gaps = 86/374 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG + HGQLG+      S + P+ V+ LA V + Q  AG +   
Sbjct: 146 GDYHSLALSKGGELFAWGQNLHGQLGV-GRKFPSTTTPQIVEHLAGVPLAQISAGEA--- 201

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL+  G +++WG +  GQLGL     +S+  P  ++GL +  V     
Sbjct: 202 ---------HSMALSMSGNIYSWGKNEFGQLGL--GHTESKDYPSLIEGLDNQKVEFVAC 250

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH  +LT  G+                                      L+T+G  ++
Sbjct: 251 GGSHSALLTQDGL--------------------------------------LFTFGAGKH 272

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS     +P  V  LV   +  IACG  H+      + ++++FG G   QL + 
Sbjct: 273 GQLG-HNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 331

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGED-SLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV- 300
            +  +   L        PV +++ E+  L SH+    +  I +GG+ SI+   K  +   
Sbjct: 332 GTRDQLMPL--------PVKVSSSEELKLESHTSEKELIMI-AGGNQSILLWIKKENSYV 382

Query: 301 -LSDDFRVLNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCM 356
            L      LN  T    I DV  +R +  +RE+++                 +F SP C+
Sbjct: 383 NLKRTIPTLNEGTVKRWIADVETKRWQSTKREIQE-----------------IFSSPACL 425

Query: 357 NGSFLQVENDEHFS 370
            G FL+   DE FS
Sbjct: 426 TGGFLRKRKDEKFS 439



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 1/95 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   F  G LCGL+++N  + N+PFPLAL+KK+LD+  
Sbjct: 734 YGMFMYPEGGSCMWFPVKPKFEKKRYFFFGVLCGLSLFNCNVANLPFPLALFKKLLDQMP 793

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L K+LQ +LD    + E+VF I F
Sbjct: 794 SLEDLKELSPVLGKNLQTLLDDEGDNFEEVFYIHF 828



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/288 (21%), Positives = 116/288 (40%), Gaps = 38/288 (13%)

Query: 805  LEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQ 864
            + D   +    ++  + +  F +L+ +FK  +I  L         NG++         L+
Sbjct: 511  MSDQSSLVLEEYWATLQESTFSKLVQMFKTAVICQLDYWDESAEENGNV------QALLE 564

Query: 865  VLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFR 924
            +L+KL+ +N                 ++   P    +V      +     VC  R  +  
Sbjct: 565  MLKKLHRVNQ----------------VKCQLPESIFQVDELLHRLNFFVEVCR-RYLWKM 607

Query: 925  WISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQME---HAMNQTNFYLFLQTFNPH 981
             +    N        ++PFIF+  +K  LL  D  +++E   H     +  +  +  +  
Sbjct: 608  TVDTSENVECCVIFSHFPFIFNNLSKIKLLHTDTLLKIEGKKHKAYLRSAAIEEERESEF 667

Query: 982  TLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAG 1041
             L    ++ V R++++ED + +L+Q+   D +K L             V F GE   D G
Sbjct: 668  ALRPTFDLTVRRNHLIEDVLNQLSQFENEDLRKEL------------WVSFSGEIGYDLG 715

Query: 1042 GVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            GV++EF   L  E++ P+YGMF   E    +WF      ++  YF  G
Sbjct: 716  GVKKEFFYCLFAEMIQPEYGMFMYPEGGSCMWFPVKPKFEKKRYFFFG 763


>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
           (Silurana) tropicalis]
          Length = 1029

 Score =  122 bits (305), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 134/251 (53%), Gaps = 36/251 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+A++D G +++WG  + GQLG  +   ++ + PK++ GL +  ++Q   G     
Sbjct: 92  GTNHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFT-PKKITGLFNTKIIQISCGN---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL++ G VF+WG +  GQLGL S    +Q+ P+ VK L  + +VQ  A
Sbjct: 147 --------FHSLALSEDGRVFSWGQNKCGQLGLGS-QIINQATPQLVKSLKGIPLVQVTA 197

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPSQG------VQS--NL------VQDSHTT 164
           G S    L+ SG V    K N    G  SDP +G      V S  NL        + HT 
Sbjct: 198 GGSQSFALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTA 257

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
           +  L+  G +YT+G++ +GQ+G N+ N T + PQ++E      ++ +ACG  H+ +   S
Sbjct: 258 V--LSKDGSVYTFGDDTHGQLGQNSGNQT-SVPQKIEDYAG-QVSQVACGRYHTLLYVFS 313

Query: 225 VSRLYAFGIGS 235
            +R+ +FG GS
Sbjct: 314 CNRIVSFGKGS 324



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 140/321 (43%), Gaps = 68/321 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+L L + G + + G + +GQLG     K + S  +++  L + ++V    G +H  
Sbjct: 42  GEKHTLYLLEDGTLLSCGQNPYGQLG----RKSNNSSIEQISSLEAQTIVDISCGTNH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A++D G +++WG  + GQLG  +   ++ + PK++ GL +  ++Q   
Sbjct: 96  ----------SVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFT-PKKITGLFNTKIIQISC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H L L+  G V                                      ++WG N+ 
Sbjct: 145 GNFHSLALSEDGRV--------------------------------------FSWGQNKC 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL--- 239
           GQ+G+ +       PQ V+SL  +P+  +  G + SF LS S   ++A+G  +A QL   
Sbjct: 167 GQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMS-GTVFAWGKNNAGQLGFK 225

Query: 240 -DSPKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGLVVKKIYSGGDHSIVTVTKS 296
            D  K   K P  ++         ++ GE+  +++S  G      +Y+ GD +   + ++
Sbjct: 226 SDPMKGTFK-PHAVNSLRNLGVAYISCGEEHTAVLSKDGS-----VYTFGDDTHGQLGQN 279

Query: 297 SDGVLSDDFRVLNPATQILDV 317
           S    S   ++ + A Q+  V
Sbjct: 280 SGNQTSVPQKIEDYAGQVSQV 300



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 51/78 (65%)

Query: 731 IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPTL 790
           IWF      ++   F  G +CGLA+YN  +I +PFPLAL+KK+L +   L+DLK+L PT+
Sbjct: 756 IWFPSTPLVEKKKYFYFGIICGLAVYNQIVIYLPFPLALFKKLLGKKATLEDLKELQPTM 815

Query: 791 AKSLQDILDYREPDLEDV 808
            ++++D+LD     +E +
Sbjct: 816 GRTMKDLLDAESTVVESM 833



 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 20/196 (10%)

Query: 902  VAYTAFYMPDLATVCDIRIDYFRW--ISGRPNGSTRDF---LCNYPFIFDAKAKTTLLEM 956
            V   AF M +L  +  + +D   W     +P      F    C +PF+F+   K   L +
Sbjct: 590  VPINAFCMNELCPLIILPLDVNNWRLWQSQPEPDENAFPAIYCRFPFVFNFPTKVQALHL 649

Query: 957  DQRIQMEHAMNQTNFYLF---LQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFK 1013
            D   +  +   Q    L    LQ  +       L + + R +++EDT+ +L+     + K
Sbjct: 650  DSMRKRNNEKFQAQEQLVRNRLQGISDLPNIPLLHLILRRGHLLEDTLHKLSIVEDPNLK 709

Query: 1014 KPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIW 1073
            K L             V+F+GE   D+  V +EF ++LL+ +++P YGMF   +    IW
Sbjct: 710  KDL------------LVEFQGESTTDSAAVTKEFFLVLLESMVNPDYGMFSCSDPLLPIW 757

Query: 1074 FSEDTFEDQNMYFLIG 1089
            F      ++  YF  G
Sbjct: 758  FPSTPLVEKKKYFYFG 773


>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
            30864]
          Length = 1230

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 94/161 (58%), Gaps = 15/161 (9%)

Query: 939  CNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVE 998
            C Y F +DA AK  LL++D + QM    ++  FY+ +    P +    L + V R+N+V+
Sbjct: 947  CQYAFFYDADAKAKLLQIDAQNQMARKAHEA-FYMNVLAHLPASY--ILGLSVRRNNLVQ 1003

Query: 999  DTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDP 1058
            DT+ ++     ++ KKPLKV            +F GE+  DAGGVR+EFL LLL+EILDP
Sbjct: 1004 DTLDQIMSIQPSELKKPLKV------------QFVGEDGVDAGGVRKEFLQLLLREILDP 1051

Query: 1059 KYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYIS 1099
            KYGMF     TR +WFS  +FE ++M+ LIG  +    Y S
Sbjct: 1052 KYGMFVSNPRTRLLWFSGHSFEAEHMFRLIGMLFSLAIYNS 1092



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 115/260 (44%), Gaps = 68/260 (26%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ-----SIPKRVKG------------ 45
           G  HSLAL   G+VF WG +   QLGL  ++   Q     S PK                
Sbjct: 181 GETHSLALTSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAAT 240

Query: 46  ------LASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
                 +    +V+A  G+    ++    G   SL L++ G+VF WG +T GQL L   +
Sbjct: 241 LAYMDFMTRPRLVRALTGHK---IVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLR--E 295

Query: 100 KKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQ 159
            K+  +P  VK L  + + Q  AG  H L LT +                          
Sbjct: 296 LKTVPVPTLVKELYGIPIRQLAAGGRHTLALTFN-------------------------- 329

Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                       G++Y+WGNN++GQ+G+ ++    T P R+++L +   A IACG +HS 
Sbjct: 330 ------------GQVYSWGNNQFGQLGVGDT-APHTIPSRLKTLEHQFCAHIACGEDHSV 376

Query: 220 VLSKSVSRLYAFGIGSAVQL 239
           VL+++   +Y+FG G   QL
Sbjct: 377 VLTET-GGVYSFGAGGQGQL 395



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 33/235 (14%)

Query: 13  CGEVFTWGGDTHGQLGLESADKKSQSIPK--RVKGLASVSVVQACAGYSHCLVLTSTTGL 70
            G V+ WG  T GQLGL   +  + ++P+   ++  +SVS+          L      G 
Sbjct: 82  AGSVWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSM--------STLASAIACGR 133

Query: 71  WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 130
            H+L L D G+V++ G +  GQLG     KK +S P+RV  L   ++ Q   G +H L L
Sbjct: 134 AHTLFLVD-GQVYSCGSNDQGQLG----HKKHRSKPERVDALEPYTITQIACGETHSLAL 188

Query: 131 TSSGVVTC--THKENGCGSDPSQGVQSNLVQDS--HTTITSLNSPGEL--YTWGNNEYGQ 184
           TS+G V     +K +  G  PS+  +    + S   T   S++   EL   T    ++  
Sbjct: 189 TSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDF-- 246

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
                    +T+P+ V +L    I  I CGAN S VLS+    ++A+G  ++ QL
Sbjct: 247 ---------MTRPRLVRALTGHKIVQIVCGANFSLVLSER-GDVFAWGDNTSGQL 291



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 1/87 (1%)

Query: 727  ETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDL 786
             TR +WFS  +FE ++M  LIG L  LAIYN  II+ PFP  LYKK+L+   +L+DL+ +
Sbjct: 1061 RTRLLWFSGHSFEAEHMFRLIGMLFSLAIYNSIIIDAPFPSVLYKKLLNRIPVLEDLEQV 1120

Query: 787  SPTLAKSLQDILDYREPDLEDVFGITF 813
             P + ++L+ +L     ++ D   +TF
Sbjct: 1121 DPDVYRNLKYLLSCPADEVTD-LALTF 1146



 Score = 40.4 bits (93), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 32/149 (21%), Positives = 71/149 (47%), Gaps = 18/149 (12%)

Query: 747 IGTLCGLAIYNYTIINMPFPLA------LYKKILDEPILLQDLKDLSPTLAKSLQ-DILD 799
           +  +C  A+ +  +     P++      L+  +L+ P+    L   + T+  ++   IL+
Sbjct: 686 VNDVCSKALLSLVVSLSQMPISNLDTCKLFLTLLEAPVFATSLTPTAETMLSAISLKILE 745

Query: 800 YREPDLEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKL 859
           +  P ++++     R W+ L+   +F R + ++++ L +L+      D T  D T  + L
Sbjct: 746 F-VPRVQELL----RYWWYLLPAKFFLRQVAVYQRFLSHLIDTARFKDKTMPDTTRYKTL 800

Query: 860 SFCLQVLQKLNSLNNETLTSSISAGGRTV 888
              +++++ L SLN       +SAGG +V
Sbjct: 801 VRAVRLIEMLYSLNE------VSAGGASV 823


>gi|195449389|ref|XP_002072053.1| GK22640 [Drosophila willistoni]
 gi|194168138|gb|EDW83039.1| GK22640 [Drosophila willistoni]
          Length = 1261

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 174/395 (44%), Gaps = 71/395 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSL L   G V +WG +  GQLG        Q+   RV  +  V   +        L
Sbjct: 84  GSSHSLVLTKSGVVMSWGVNDCGQLG--------QTTNSRVPTMVKVPDKKP-------L 128

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQAC 121
            +    G  HSLAL + G +++WG + +GQLG+   +  S    P  +  +  + +    
Sbjct: 129 FVQIACGNEHSLALTNDGTIYSWGSNRYGQLGMSEPENMSNCHFPMHLTSIHGIPIATIA 188

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCG------SD---PSQ-------GVQSNLVQDSHTTI 165
            G +HC +++ S  V    + N         SD   P++       GV+     D  +  
Sbjct: 189 CGGNHCFLISKSSAVYGWGRNNRGQLGLNDLSDRPYPTELTTLRPCGVRYVACGDEFSVF 248

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             L   G L+T G+  +GQ+G  N +  +  P +V  L + P+  +AC  +++     S+
Sbjct: 249 --LTHKGALFTCGDGTHGQLGHGNLSNALA-PFKVMKLRDKPVTQVACAKHYTLAFVPSI 305

Query: 226 SRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
            +LY FG     QL     ++  P  I+GPWI+  +   +  +  V      +V +I+SG
Sbjct: 306 GQLYGFG-----QLG---KIYTLPGKINGPWISPTLTANSAFNDAV------IVNQIFSG 351

Query: 286 GDHSIVTVTKSSDGVLSDDFR-VLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLL 344
           G  S+VT T   D V   D R  LN  +QI  ++                 E +D  +L+
Sbjct: 352 GLKSVVTTTLLVDNVPPFDMRHPLNQESQIFTLS-----------------EQMDNSVLV 394

Query: 345 YLETVF---LSPGCMNGSFLQVENDEHFSCNSKKF 376
             E VF   +   C+NGSFL + ND+H +C+ + F
Sbjct: 395 DEEPVFVWCMHCSCLNGSFL-LANDQHLNCSIENF 428



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/104 (47%), Positives = 71/104 (68%), Gaps = 5/104 (4%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKD 785
           EE+R +WF++ TFE++N  +L+G   GLA+YN T+IN+P PLALYKK+L + + L DL +
Sbjct: 585 EESRLLWFADSTFENKNQFYLLGLAFGLAVYNLTVINLPLPLALYKKLLGKKVDLSDLHE 644

Query: 786 LSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFERLI 829
           L P+ AKSL+ ILDY   D ++ F +TF      +S D F + I
Sbjct: 645 LLPSEAKSLKAILDYTGDDFKETFDLTFE-----LSKDVFGQSI 683



 Score = 96.7 bits (239), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 47/100 (47%), Positives = 67/100 (67%), Gaps = 15/100 (15%)

Query: 993  RDNIVEDTIRELAQYTT---NDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLM 1049
            R++IV+D++ EL + +     D KKPL +            KF GE+AED GGVR+EF  
Sbjct: 520  REHIVKDSLNELQKLSNVRPEDLKKPLII------------KFIGEDAEDVGGVRQEFFN 567

Query: 1050 LLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            LLLK+I DP YGMFK  EE+R +WF++ TFE++N ++L+G
Sbjct: 568  LLLKKIFDPDYGMFKVLEESRLLWFADSTFENKNQFYLLG 607



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 5/103 (4%)

Query: 427 CMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAILASHAHL 486
           C+NGSFL + ND+H +C+ +N GVD++  Q  +  I    R+ V  L   +  +     L
Sbjct: 408 CLNGSFL-LANDQHLNCSIENFGVDIRAAQKAFRNI----RDVVSPLHKEMIWIVFTLQL 462

Query: 487 VKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           + SL  TP D E+LR++L LPLYHEF N + +  LH PFA A+
Sbjct: 463 IPSLKCTPADVESLRVYLILPLYHEFANSKLYSRLHAPFAQAI 505



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 103/245 (42%), Gaps = 71/245 (28%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKR-VKGLASVSVVQACAGYSHC 61
           G  ++L L   G+V+    +THGQ+   +  K+S+  P R V GL  + V     G SH 
Sbjct: 33  GDRYTLFLTAKGKVYEC--ETHGQV--HNTRKRSRLSPFRLVAGLQDIEVSAIACGSSHS 88

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS----- 116
           LVLT +            G V +WG +  GQLG        Q+   RV  +  V      
Sbjct: 89  LVLTKS------------GVVMSWGVNDCGQLG--------QTTNSRVPTMVKVPDKKPL 128

Query: 117 VVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYT 176
            VQ   G  H L LT+ G +                                      Y+
Sbjct: 129 FVQIACGNEHSLALTNDGTI--------------------------------------YS 150

Query: 177 WGNNEYGQMGINNSN--TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
           WG+N YGQ+G++     +    P  + S+  +PIA IACG NH F++SKS S +Y +G  
Sbjct: 151 WGSNRYGQLGMSEPENMSNCHFPMHLTSIHGIPIATIACGGNHCFLISKS-SAVYGWGRN 209

Query: 235 SAVQL 239
           +  QL
Sbjct: 210 NRGQL 214


>gi|170581639|ref|XP_001895769.1| hypothetical protein [Brugia malayi]
 gi|158597158|gb|EDP35375.1| conserved hypothetical protein [Brugia malayi]
          Length = 916

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 143/336 (42%), Gaps = 100/336 (29%)

Query: 816  WYLLMSDDYFERLILIFKQCLIYLLQ-QPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            W+ L    +F RL+    + L  L++ +P    +          + FC  +L +LN++N 
Sbjct: 431  WWSLFERRHFNRLVSALVKALEQLVEHEPNNTSNV---------IPFC-SILSRLNAINK 480

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
                                     + +AY  FY+ +L    D+  D   W       + 
Sbjct: 481  SQ-----------------------KLIAYDKFYLNNLQKKVDMANDLAGW----EFNAQ 513

Query: 935  RD--FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYL--FLQTFNPHTLNQYLEVE 990
             D  +  NYPF+ +A  KT LL+++  IQM+ +M+ +   +  F  +  PH    + E+ 
Sbjct: 514  HDVFYWSNYPFLLNADLKTYLLQLEAHIQMQISMSTSGIMILPFNISLQPHP---FFEIS 570

Query: 991  VSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLML 1050
            V RDNIV+D +  L      D KKPLKV             F GEEA+DAGGV++EF ML
Sbjct: 571  VHRDNIVDDAMIALLSSKHMDLKKPLKV------------YFIGEEADDAGGVKKEFFML 618

Query: 1051 LLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEYEET 1110
            L +E+L  KYGMF E EE+  IWFS             G E  P ++             
Sbjct: 619  LFQELLQAKYGMFTENEESHLIWFS-------------GVETDPLSFK------------ 653

Query: 1111 RSIWFSEDTFEDQNMYFLIGTLCGLAIYNYT-VRFP 1145
                             L+G LC LAIYN   V FP
Sbjct: 654  -----------------LVGMLCALAIYNSVLVDFP 672



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/105 (50%), Positives = 71/105 (67%), Gaps = 4/105 (3%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCF-LIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
           YG+ TE EE+  IWFS    E   + F L+G LC LAIYN  +++ PFPLALYKKILD P
Sbjct: 628 YGMFTENEESHLIWFS--GVETDPLSFKLVGMLCALAIYNSVLVDFPFPLALYKKILDVP 685

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSD 822
           + L+DL +LSP   +SL+ +LDY + D+E+VF +TF     L+ D
Sbjct: 686 LELEDLSELSPAEGRSLRSLLDYEDDDIEEVFCLTFMISVSLLGD 730



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 179/401 (44%), Gaps = 83/401 (20%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLASVSVVQACAGYSH 60
           +G  H+L L+D G+V++ G + +G+LG     + S +I P  +   ++VS++Q  AG SH
Sbjct: 54  SGERHTLFLSDDGKVWSCGSNYNGELGRGGVREGSYTIYPVHIS--STVSIIQISAGRSH 111

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                       S+A++D G +F WG ++HGQL + S D  +   PKRV  L     VQ 
Sbjct: 112 ------------SMAVSDDGRLFAWGSNSHGQLAM-SGDILASDTPKRVPSLPET--VQV 156

Query: 121 CAGYSHCLVLTSSGVVTCTHKE-------------------------NGCGSDPSQGVQS 155
             G SH + L   G V    ++                         N C       V +
Sbjct: 157 ACGASHTVSLNGGGRVFIWGQQSDGRIRHSPAEVEIFISIPIVQNVVNPCAVPNINSVVA 216

Query: 156 NLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGA 215
               DSH+   +L   G +++ G++ +GQ+G    N +    + +  ++   +  IACG 
Sbjct: 217 VECGDSHSI--ALTHEGRVFSCGSDSFGQLGCGQPNRSQNCMRGITEMLGSHVTRIACGR 274

Query: 216 NHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHGPWIASPVAMTAGEDSLVSHS 274
            H+ V++    +++ FG+ S  QL    + ++ TP++I               DS+ +  
Sbjct: 275 CHTIVVAN--GKMHTFGLNSNGQLGHGNTRNQITPRVI---------------DSVEN-- 315

Query: 275 GGLVVKKIYSGGDHS--IVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQL 332
               V  +++G D S  +   TK +  VLS     L     +   + +R+++     ++L
Sbjct: 316 ----VASVFAGWDQSFCLQIHTKHAYDVLSGPSSYLQKPKYL---SLQRIRDLFAVGDKL 368

Query: 333 KSDETLDQDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNS 373
                    ++  LE+VF S   +N SFL  EN++ + C++
Sbjct: 369 T--------IIGELESVFSSLSSINASFL-YENEKKYRCSA 400



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 58/222 (26%)

Query: 16  VFTWGGDTHGQLGLE----SADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLW 71
           VF   GD  GQLG       +D +   +P+ V G        A  G +   V +  +G  
Sbjct: 8   VFGCAGD--GQLGFRPDSVESDSQMMIVPRLVYG--------APTGQNGVTVKSIASGER 57

Query: 72  HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLASVSVVQACAGYSHCLVL 130
           H+L L+D G+V++ G + +G+LG     + S +I P  +   ++VS++Q  AG SH + +
Sbjct: 58  HTLFLSDDGKVWSCGSNYNGELGRGGVREGSYTIYPVHIS--STVSIIQISAGRSHSMAV 115

Query: 131 TSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNS 190
           +                                        G L+ WG+N +GQ+ ++  
Sbjct: 116 SDD--------------------------------------GRLFAWGSNSHGQLAMSGD 137

Query: 191 NTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
                 P+RV SL       +ACGA+H+  L+    R++ +G
Sbjct: 138 ILASDTPKRVPSLPE--TVQVACGASHTVSLNGG-GRVFIWG 176


>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 341

 Score =  120 bits (301), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 98/310 (31%), Positives = 147/310 (47%), Gaps = 51/310 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++ L   GEVFTWG    G+LG    D   + +P+  + LA   V+Q         
Sbjct: 41  GSGHTVVLTTDGEVFTWGRGDDGRLG--HGDNGWKYVPRMTQSLAGQIVLQV-------- 90

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
               T G +H+ A+   G+++TWGG  +G+LG    D+   + PKRV+ L   +V Q   
Sbjct: 91  ----TCGSYHTAAVTGNGDLYTWGGGMYGKLG--HGDEAGHATPKRVEALVGATVAQIAC 144

Query: 123 GYSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQ-----------SNLVQDS----HTTI 165
           G  H  ++T+SG + T   KENG  G   ++G Q             + Q S    HT I
Sbjct: 145 GSRHTAIVTASGALYTWGDKENGVAGHGETEGHQYLPRLLESMAAKRVAQISACGFHTAI 204

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +    GEL+TWG  ++G++G + S      P  V+ +V      ++CG  H+ V+S+  
Sbjct: 205 VT--DAGELFTWGEGKFGRLG-HMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSED- 260

Query: 226 SRLYAFGIGSAVQLDSPKSVHK-TPQLIH---GPWIASPVAMTAGEDSLVSHSGGLVVKK 281
            RLY FG G   QL     V+K TP  +    G +++    +T G     SHS  L VK 
Sbjct: 261 GRLYTFGGGEHGQLGHNDRVNKMTPTFVEALDGMFVSQ---ITCG----WSHSVALTVKG 313

Query: 282 I---YSGGDH 288
           +   +  GDH
Sbjct: 314 LVYTWGNGDH 323



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 53/198 (26%), Positives = 83/198 (41%), Gaps = 57/198 (28%)

Query: 5   WHSLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 63
           +H+  + D GE+FTWG    G+LG +   +  S +I   + G     V  +C G+     
Sbjct: 200 FHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPTIVDYMVGKKPRQV--SCGGF----- 252

Query: 64  LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG 123
                   H+  +++ G ++T+GG  HGQLG    D+ ++  P  V+ L  + V Q   G
Sbjct: 253 --------HTAVVSEDGRLYTFGGGEHGQLG--HNDRVNKMTPTFVEALDGMFVSQITCG 302

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
           +SH + LT  G+V                                      YTWGN ++G
Sbjct: 303 WSHSVALTVKGLV--------------------------------------YTWGNGDHG 324

Query: 184 QMGINNSNTTVTKPQRVE 201
           ++G  N    V  PQ VE
Sbjct: 325 KLGHGNGR-KVAVPQAVE 341



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 16/108 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+  +++ G ++T+GG  HGQLG    D+ ++  P  V+ L  + V Q   G+SH  
Sbjct: 250 GGFHTAVVSEDGRLYTFGGGEHGQLG--HNDRVNKMTPTFVEALDGMFVSQITCGWSH-- 305

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK 110
                     S+AL   G V+TWG   HG+LG    + +  ++P+ V+
Sbjct: 306 ----------SVALTVKGLVYTWGNGDHGKLG--HGNGRKVAVPQAVE 341


>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
          Length = 1031

 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 173/381 (45%), Gaps = 61/381 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K+   IP+++K L  + ++Q         
Sbjct: 94  GKEHSLAVCYKGRVFAWGAGSEGQLGI-GEFKEINLIPQKIKTLTGIKIIQV-------- 144

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
               + G +HSLAL++ G+VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 145 ----SCGNYHSLALSEDGQVFSWGSNSHGQLGL-GKELPSQASPQRVRSLDGIPLAQVAA 199

Query: 123 GYSHCLVLTSSG-------------------VVTCTHKENGCGSDPSQGVQSNLVQDSHT 163
           G +H   L+ SG                   V   ++K     +  + GV        HT
Sbjct: 200 GGAHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHT 259

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            + + N  G+++T+G+N  GQ+G ++     T PQ +E +  L ++ I CG+ H+     
Sbjct: 260 AVLTQN--GKVFTFGDNSCGQLG-HSPTAEKTGPQLMEGIEGL-VSQIDCGSYHTLAYVY 315

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
           +  ++ +FG G      S KS    P+L+      + V      + LV     + VK I+
Sbjct: 316 TTGQVVSFGRGP-----SCKSCSNHPELLTE---NTDVTCLISAERLVD----VQVKHIF 363

Query: 284 SGGDHSIVTVTK--SSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           +G   + VT  K  SS  V       ++   Q L   +  +     E E   S+      
Sbjct: 364 AGTHANFVTTYKDTSSTNVSRKILPEISQINQSLTEKWMAVTRGSSEHEMATSE------ 417

Query: 342 LLLYLETVFLSPGCMNGSFLQ 362
               +  +F SP C+  SFL+
Sbjct: 418 ----VRMIFSSPACLTASFLK 434



 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 127/271 (46%), Gaps = 34/271 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L   G V + G ++ GQLG     ++ Q  PK ++ L ++ V     G    
Sbjct: 41  SGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQ--PKPIQALETLRVELVSCGKE-- 96

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                     HSLA+   G VF WG  + GQLG+    K+   IP+++K L  + ++Q  
Sbjct: 97  ----------HSLAVCYKGRVFAWGAGSEGQLGI-GEFKEINLIPQKIKTLTGIKIIQVS 145

Query: 122 AGYSHCLVLTSSGVV----TCTHKENGCGSD-PSQ----------GVQSNLVQDSHTTIT 166
            G  H L L+  G V    + +H + G G + PSQ          G+    V        
Sbjct: 146 CGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSF 205

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVT--KPQRVESLVNLPIALIACGANHSFVLSKS 224
           +L+  G  + WG+N  GQ+    SN  V   KP+ V +L  L +  I+CG  H+ VL+++
Sbjct: 206 ALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQN 265

Query: 225 VSRLYAFGIGSAVQLDSPKSVHKT-PQLIHG 254
             +++ FG  S  QL    +  KT PQL+ G
Sbjct: 266 -GKVFTFGDNSCGQLGHSPTAEKTGPQLMEG 295



 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 61/95 (64%), Gaps = 1/95 (1%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y EE   +WF      ++   FL G LCGL++YN  + N+PFPLAL+KK+LD+  
Sbjct: 743 YGMFIYPEEGSYMWFPVSPKFEKKRYFLFGMLCGLSLYNLNVANLPFPLALFKKLLDQKA 802

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            LQDLK+LSP L K+LQ+IL+    D+ +   I F
Sbjct: 803 SLQDLKELSPLLGKNLQEILNNEADDIGEELYIYF 837



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 14/151 (9%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQ-YLEVEVSRDNIVE 998
            ++PFIF+  +K  LL+ +  +++   + Q  +  + Q   P         + V R ++VE
Sbjct: 635  DFPFIFNLPSKIKLLQAESYLKI-MGLKQKEYLDWGQVNLPEKDGHPTFTLRVRRSHLVE 693

Query: 999  DTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDP 1058
            D + +L+Q    D  K L             ++F  E      GV+ EF   + +E+   
Sbjct: 694  DALLQLSQVEDTDLCKLL------------VIEFIKEICSVGEGVKSEFFHCIFEEMTKT 741

Query: 1059 KYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +YGMF   EE   +WF      ++  YFL G
Sbjct: 742  EYGMFIYPEEGSYMWFPVSPKFEKKRYFLFG 772



 Score = 42.0 bits (97), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 10/112 (8%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           +  +F SP C+  SFL+       S  + +  VD+Q+ +D ++ + + E       +S++
Sbjct: 418 VRMIFSSPACLTASFLKKRQ----SVETISIDVDLQMARDTFEKLTKTE------WISSM 467

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
                  +L+++L    P  EAL +FL LP      + +    L +P+A A+
Sbjct: 468 ITTGFRDNLLRALPCHSPHQEALSVFLLLPECPVMHDSKNWRSLVVPYAEAV 519


>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
          Length = 1010

 Score =  120 bits (300), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 125/255 (49%), Gaps = 56/255 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+E   +K  + PK++K L  + ++Q   G+    
Sbjct: 81  GKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFT-PKKIKTLTGIKIIQVSCGH---- 135

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL++ G+V++WG ++ GQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 136 --------YHSLALSEDGQVYSWGKNSQGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 186

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H   L+ SG                                        + WG+N  
Sbjct: 187 GGAHSFALSLSGTS--------------------------------------FGWGSNNT 208

Query: 183 GQMGINNSNTTVT--KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           GQ+ ++ +NT V   KP  + +L +L +  I+CG  H+ VL+++  +++ FG  S  QL 
Sbjct: 209 GQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQN-GKVFTFGDNSCGQLG 267

Query: 241 -SPKSVHKTPQLIHG 254
            +P +  + PQ + G
Sbjct: 268 YNPTAKKRGPQQVEG 282



 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 56/233 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSL L   G V + G +T GQLG     ++ +  P  +K L ++            L
Sbjct: 29  GERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREER--PGLIKALETL------------L 74

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V   + G  HSLA+   G VF WG  + GQLG+E   +K  + PK++K L  + ++Q   
Sbjct: 75  VGLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFT-PKKIKTLTGIKIIQVSC 133

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G+ H L L+  G                                      ++Y+WG N  
Sbjct: 134 GHYHSLALSEDG--------------------------------------QVYSWGKNSQ 155

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
           GQ+G+     +   PQRV SL  +P+A +A G  HSF LS S +   +FG GS
Sbjct: 156 GQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGT---SFGWGS 205



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 150/366 (40%), Gaps = 84/366 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL++ G+V++WG ++ GQLGL   +  SQ+ P+RV+ L  + + Q  AG +   
Sbjct: 134 GHYHSLALSEDGQVYSWGKNSQGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGA--- 189

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLASVSVVQAC 121
                    HS AL+  G  F WG +  GQL L   +   Q   P  +  L S+ V+   
Sbjct: 190 ---------HSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYIS 240

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            GY H  VLT +G V                                      +T+G+N 
Sbjct: 241 CGYEHTAVLTQNGKV--------------------------------------FTFGDNS 262

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
            GQ+G N +      PQ+VE +  L ++ I CG+ H+          Y +  G  V    
Sbjct: 263 CGQLGYNPT-AKKRGPQQVEGIDGL-VSQIDCGSYHTLA--------YVYTTGEVVSFGR 312

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLV---VKKIYSGGDHSIVTVTK--S 296
            ++   +P         S   M   + S +  +  LV   VK I++G   ++VT  +  S
Sbjct: 313 GRNCASSP-------THSEAQMENFDMSCLISANDLVDVQVKHIFAGTYVNVVTTYQETS 365

Query: 297 SDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCM 356
           S  V       ++   Q L   +  +     + E  KS+          +  +F SP C+
Sbjct: 366 STNVSKKTLPEISRINQPLMEQWMAVTNGNTQHELAKSE----------IRVIFSSPACL 415

Query: 357 NGSFLQ 362
             SFL+
Sbjct: 416 TASFLK 421



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 1/96 (1%)

Query: 719 HYGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            YG+  Y EE   +W       ++   FL G LCGL++YN  + N+PFPLAL+KK+L + 
Sbjct: 721 EYGMFIYPEEGSYMWIPVSPKFEKKRYFLFGMLCGLSLYNSNVANLPFPLALFKKLLGQQ 780

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
             L+DLK+LSP L ++LQ++L+    D+ +   I F
Sbjct: 781 PSLEDLKELSPLLGRNLQEVLNDEADDIGEELYIHF 816



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 82/202 (40%), Gaps = 55/202 (27%)

Query: 941  YPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDT 1000
            +PFIF+  +K  L + D  ++M+    + N  + L   N         + V R ++ ED 
Sbjct: 617  FPFIFNLLSKIKLWQADSYLKMQG--RKMNGQMILPKENEFPPLPIFTLRVRRTHLTEDA 674

Query: 1001 IRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKY 1060
            +R+L+Q    D +KPL             ++F  E   +  GV+ EF   + +E+   +Y
Sbjct: 675  LRQLSQAEVTDLQKPL------------VIEFIKEIRSEGVGVKSEFFHCIFEEMTKTEY 722

Query: 1061 GMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEYEETRSIWFSEDTF 1120
            GMF   EE   +W                   +P +         ++E+ R         
Sbjct: 723  GMFIYPEEGSYMW-------------------IPVS--------PKFEKKR--------- 746

Query: 1121 EDQNMYFLIGTLCGLAIYNYTV 1142
                 YFL G LCGL++YN  V
Sbjct: 747  -----YFLFGMLCGLSLYNSNV 763


>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
          Length = 368

 Score =  120 bits (300), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 138/277 (49%), Gaps = 34/277 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q            
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV----------- 142

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G WH LAL   G+ FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +
Sbjct: 143 -SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGA 200

Query: 126 HCLVLTSSGVVTC--------------THKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
           H   L+ SG V                  +E+ C      +Q V      + HT +  L 
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+     S   +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317

Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTA 265
           AFG G+  QL +  + + K P  + G W A    ++A
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSA 354



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 111/234 (47%), Gaps = 56/234 (23%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + GEV+T G +T GQLG E    K    P+++  LA   ++    G SH     
Sbjct: 45  HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 95

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL+D G++F+WG  + GQLGL + +  S ++P+ ++ L   +++Q   G  
Sbjct: 96  -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL L + G                                      + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           G+     +   PQRV SL  +P+A +A G  HSF LS S   ++ +G+ +A QL
Sbjct: 170 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQL 222


>gi|148672794|gb|EDL04741.1| mCG16651 [Mus musculus]
          Length = 462

 Score =  119 bits (298), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 125/255 (49%), Gaps = 56/255 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+A+   G+VF WG  + GQLG+    K+   +P ++K LA + ++Q   G+    
Sbjct: 82  GKEHSVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMPTKIKALAGIKIIQVSCGH---- 136

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL++ G VF+WG ++ GQLGL   + +SQ+IP++VK L  + + Q  A
Sbjct: 137 --------YHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQAIPQKVKSLEGIPLAQVAA 187

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H   L+ +G                                        + WG+N  
Sbjct: 188 GGTHSFALSLTGTS--------------------------------------FGWGSNRS 209

Query: 183 GQMGI--NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           GQ+ +  N     + KP  + +L NL +  I+CG  H+ VL++   +++ FG  S+ QL 
Sbjct: 210 GQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEE-GQVFTFGGNSSGQLQ 268

Query: 241 -SPKSVHKTPQLIHG 254
            SP+S  + PQLI G
Sbjct: 269 PSPRSGQRGPQLIEG 283



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 123/255 (48%), Gaps = 41/255 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL++ G VF+WG ++ GQLGL   + +SQ+IP++VK L  + + Q  AG +H  
Sbjct: 135 GHYHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQAIPQKVKSLEGIPLAQVAAGGTH-- 191

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQA 120
                     S AL+  G  F WG +  GQL L S +K  + I  P  +  L ++SV+  
Sbjct: 192 ----------SFALSLTGTSFGWGSNRSGQLAL-SGNKVKEQIYKPHSIGALKNLSVIYI 240

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGS-DPS-----------QGVQSNLVQ---DSHTTI 165
             GY H  VLT  G V  T   N  G   PS           +G+   + Q    S+ TI
Sbjct: 241 SCGYEHTAVLTEEGQV-FTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTI 299

Query: 166 TSLNSPGELYTWG-------NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
             + + G++ + G       N  + +    NS+ T       E LV++ +  I  GA+ +
Sbjct: 300 AYVYTTGQVVSLGRGPSHTSNPTHQEAPAENSDITCLLA--AEDLVDIEVKDIFAGAHAN 357

Query: 219 FVLSKSVSRLYAFGI 233
           FV ++ VS   + G+
Sbjct: 358 FVTTRRVSHTRSTGV 372



 Score = 83.6 bits (205), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 62/257 (24%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSV-VQACAGY 58
           +G  HSL L     V++ G ++ GQLG     ++ QS   P+ ++ L  + V + +C   
Sbjct: 29  SGEHHSLLLFSNHRVYSCGDNSWGQLG----QRRDQSTERPEPIQALNDLHVDLVSC--- 81

Query: 59  SHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVV 118
                     G  HS+A+   G+VF WG  + GQLG+    K+   +P ++K LA + ++
Sbjct: 82  ----------GKEHSVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMPTKIKALAGIKII 130

Query: 119 QACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWG 178
           Q   G+ H L L+                           +D H           +++WG
Sbjct: 131 QVSCGHYHSLALS---------------------------EDGH-----------VFSWG 152

Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
            N  GQ+G+  ++ +   PQ+V+SL  +P+A +A G  HSF LS + +   +FG GS   
Sbjct: 153 RNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGT---SFGWGSNRS 209

Query: 239 LDSPKSVHKTPQLIHGP 255
                S +K  + I+ P
Sbjct: 210 GQLALSGNKVKEQIYKP 226


>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
          Length = 1020

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 174/381 (45%), Gaps = 61/381 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKITTLNGIKIIQVSCGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   +VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 138 --------YHSLALSKDSQVFSWGKNSHGQLGL-GKEVPSQASPQRVRSLEGIPLAQVAA 188

Query: 123 GYSHC-------------------LVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHT 163
           G +H                    L L+   V   ++K    G+  + GV      D HT
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHT 248

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            +  L   G+++T+G+N  GQ+G + +      PQ VE +  L ++ I CG+ H+     
Sbjct: 249 AV--LIQDGKVFTFGDNSSGQLGYSPTPEK-RGPQLVERIDGL-VSQIDCGSYHTLAYVH 304

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
           +  ++ +FG G +   D+ K  H  P+ + G +      + + ED +      + VK I+
Sbjct: 305 TTGQVISFGHGPS---DTSKPTH--PEALTGNFDIR--CLISAEDLV-----DVQVKHIF 352

Query: 284 SGGDHSIVTVTK--SSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           +G   + VT  +  SS G        ++  +Q +   +  +K    E +  KS+      
Sbjct: 353 AGTYANFVTTHQDTSSTGAPGKTLPEISRISQSMAEKWIAVKRRSTECDVAKSE------ 406

Query: 342 LLLYLETVFLSPGCMNGSFLQ 362
               +  +F SP C+  SFL+
Sbjct: 407 ----IRMIFSSPACLTASFLK 423



 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 104/238 (43%), Gaps = 54/238 (22%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L     V + G ++ GQLG   A +    +P+ ++ L +++V     G  H 
Sbjct: 30  SGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGE--LPEPIQALETLNVDLVSCGKEH- 86

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      SLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q  
Sbjct: 87  -----------SLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKITTLNGIKIIQVS 134

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H L L+                           +DS           ++++WG N 
Sbjct: 135 CGHYHSLALS---------------------------KDS-----------QVFSWGKNS 156

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           +GQ+G+     +   PQRV SL  +P+A +A G  HSF LS   +  + +G  SA QL
Sbjct: 157 HGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTS-FGWGSNSAGQL 213



 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 1/95 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   FL G LCGL+++N  + N+PFPLALYKK+LD+  
Sbjct: 733 YGMFMYPEMGSCMWFPAKPKLEKKRYFLFGMLCGLSLFNLNVANLPFPLALYKKLLDQKP 792

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L KSLQ++L+    D+ DV  I F
Sbjct: 793 SLEDLKELSPRLGKSLQEVLNDDADDIGDVLCIRF 827



 Score = 67.8 bits (164), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 19/155 (12%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLF-----LQTFNPHTLNQYLEVEVSRD 994
            ++PFIF++ +K  LL+ D  I+M   M++   Y+      LQ  +    +    + V R 
Sbjct: 622  DFPFIFNSLSKIKLLQADSCIKM--WMSEEKAYMLRHETILQKKDEFPPSPRFILRVRRS 679

Query: 995  NIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKE 1054
             +V+D +R+L+Q    DF K L             V+F  E   ++GGV  EF   + +E
Sbjct: 680  RLVKDALRQLSQAEATDFCKVL------------VVEFIEEIRPESGGVSSEFFHCMFEE 727

Query: 1055 ILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +  P+YGMF   E    +WF      ++  YFL G
Sbjct: 728  MTKPEYGMFMYPEMGSCMWFPAKPKLEKKRYFLFG 762


>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
          Length = 1014

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 135/272 (49%), Gaps = 35/272 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L   GE+ ++G ++HGQLG     ++ Q  PKR+  L ++ V     G    
Sbjct: 30  SGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQ--PKRIPALETLRVDLVSCGKE-- 85

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                     HSLA+   G VF WG  + GQLG+   ++ +  IP+++K L  + ++Q  
Sbjct: 86  ----------HSLAVCYKGRVFAWGAGSEGQLGIGEFNEINL-IPRKIKTLTDIKIIQVS 134

Query: 122 AGYSHCLVLTSSGVV----TCTHKENGCGSD-PSQ----------GVQSNLVQDSHTTIT 166
            G+ H L L+  G +    + +H + G G + PSQ          G+    V        
Sbjct: 135 CGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHSF 194

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTV---TKPQRVESLVNLPIALIACGANHSFVLSK 223
           +L+  G  + WG+N  GQ+ +   N  V   +KP  V++L NL +  I+CG  H+ VL++
Sbjct: 195 ALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYISCGYEHTAVLTQ 254

Query: 224 SVSRLYAFGIGSAVQLD-SPKSVHKTPQLIHG 254
           +  +++ FG  S  QL  SP +  + PQL+ G
Sbjct: 255 T-GKVFTFGGNSYGQLGYSPTAGKEGPQLVEG 285



 Score =  116 bits (291), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 177/415 (42%), Gaps = 77/415 (18%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+   ++ +  IP+++K L  + ++Q   G+ H  
Sbjct: 83  GKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINL-IPRKIKTLTDIKIIQVSCGHHH-- 139

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     SLAL++ G +FTWG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 140 ----------SLALSEDGRLFTWGSNSHGQLGL-GKECPSQASPQRVQFLDGIPLTQVAA 188

Query: 123 GYSHCLVLTSSGV------------------VTCTHKENGCGSDPSQGVQSNLVQDSHTT 164
           G +H   L+ SG                   V        C  D  + +    +   +  
Sbjct: 189 GGAHSFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYISCGYEH 248

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              L   G+++T+G N YGQ+G + +      PQ VE +  L ++ I CG+ H+     +
Sbjct: 249 TAVLTQTGKVFTFGGNSYGQLGYSPT-AGKEGPQLVEGIDGL-VSQIDCGSYHTLAYVYT 306

Query: 225 VSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSG--GLVVKKI 282
             ++ +FG G   +  SP                 P A T     L+S        VK I
Sbjct: 307 TGKVVSFGRGPCCK-SSP---------------THPEAPTENFTCLISADDLVDFEVKHI 350

Query: 283 YSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFER------LKECEREVEQLKSDE 336
           ++G   + VT  +  D   +D  R + P  + +  +          +  EREV + +   
Sbjct: 351 FAGTHANFVTTCQ--DTSSTDVPRKILPEIRQISQSLTEKWIASAARSPEREVAKSE--- 405

Query: 337 TLDQDLLLYLETVFLSPGCMNGSFLQV-ENDEHFSCN----SKKFSFIKLSLINW 386
                    +  +F SP C+  SFL+  E+ E  S +      + +F KL+   W
Sbjct: 406 ---------IAMIFSSPACLTASFLKKRESVETISIDVDLQKARDTFEKLTKTEW 451



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 1/78 (1%)

Query: 719 HYGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            YG+  Y EE   +WF      ++   FL G LCGL++ N  + N+PFPLAL+KK+L + 
Sbjct: 725 EYGMFIYPEEGSYMWFPVSPVFEKKRYFLFGILCGLSLNNSNVANLPFPLALFKKLLGQK 784

Query: 778 ILLQDLKDLSPTLAKSLQ 795
             LQDLK+LSP L K+LQ
Sbjct: 785 PSLQDLKELSPLLGKNLQ 802



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 40/203 (19%)

Query: 107 KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
           +R  G     + QA +G  H L+L S+G +  ++ +N  G    + VQ    Q+    I 
Sbjct: 15  RRPAGRGGAELRQAASGERHSLLLLSNGELH-SYGDNSHGQLGRRDVQR---QEQPKRIP 70

Query: 167 SLNS------------------PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPI 208
           +L +                   G ++ WG    GQ+GI   N     P+++++L ++ I
Sbjct: 71  ALETLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKI 130

Query: 209 ALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGED 268
             ++CG +HS  LS+   RL+ +G  S  QL   K           P  ASP        
Sbjct: 131 IQVSCGHHHSLALSED-GRLFTWGSNSHGQLGLGKEC---------PSQASP-------- 172

Query: 269 SLVSHSGGLVVKKIYSGGDHSIV 291
             V    G+ + ++ +GG HS  
Sbjct: 173 QRVQFLDGIPLTQVAAGGAHSFA 195



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 13/150 (8%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVED 999
            N+PFIF+  +K  L + +  ++M   + Q  +    Q       +    + V R ++VED
Sbjct: 619  NFPFIFNLPSKIQLFQAESHLKMLD-LKQREYLDRGQGILQFNESLPFILRVRRSHLVED 677

Query: 1000 TIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPK 1059
             +R+L Q    +  K L +            +F  E      GV  EF   + +E+   +
Sbjct: 678  ALRQLNQVEDTNLCKGLVI------------EFIKEIRSPGYGVIAEFFYYIFEEMTKTE 725

Query: 1060 YGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            YGMF   EE   +WF      ++  YFL G
Sbjct: 726  YGMFIYPEEGSYMWFPVSPVFEKKRYFLFG 755


>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
           domestica]
          Length = 1016

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 168/384 (43%), Gaps = 68/384 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF+WG  + GQLG+    KK  SIPK++  L+S  ++Q   G+    
Sbjct: 97  GKEHSLAICKEGRVFSWGSGSDGQLGIREF-KKLSSIPKKIDELSSFKIIQVSCGH---- 151

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HS+AL   G VF+WG + HGQLGL   +  SQ+ P+ VK L  + + Q  A
Sbjct: 152 --------YHSIALAQDGRVFSWGKNNHGQLGL-GENVPSQASPQWVKSLDGIPLAQVAA 202

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQ---------------------DS 161
           G +H   L+ SG  +     N  G     G + +  Q                     D 
Sbjct: 203 GGAHSFALSFSG-TSYGWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDE 261

Query: 162 HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
           HT +  L   G+++T+G+N+ GQ+G     + +  PQ V+S V+   + IACG+ H+   
Sbjct: 262 HTAV--LTQDGKVFTFGSNDSGQLG-RQLISGMKGPQVVDSAVSF--SQIACGSYHTLAY 316

Query: 222 SKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSG--GLVV 279
           S +  ++ +FG GS           + P    GP             +L+S +      V
Sbjct: 317 SCTTGQVISFGCGS----------QRDP---IGPLQPGDAVQNFNISNLISSNDFTDFQV 363

Query: 280 KKIYSGGDHSIVTVTK--SSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDET 337
           K I++G + + VT  +  SS G             QI  +N   +    R+    K    
Sbjct: 364 KDIFAGANANFVTTLQDTSSSGATG------RSPQQISQINQSLI----RKWTMAKFGSE 413

Query: 338 LDQDLLLYLETVFLSPGCMNGSFL 361
             ++    +  +F SP C+  SFL
Sbjct: 414 ECEESRREICEIFSSPACLTASFL 437



 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 141/551 (25%), Positives = 223/551 (40%), Gaps = 96/551 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSL L   G V++ G ++ GQLG +   K  +  P +++ L +  +V    G     
Sbjct: 45  GERHSLLLLSDGTVWSCGNNSCGQLGRKRCQKHGR--PAQIQALETQDIVSVSCGKE--- 99

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HSLA+   G VF+WG  + GQLG+    KK  SIPK++  L+S  ++Q   
Sbjct: 100 ---------HSLAICKEGRVFSWGSGSDGQLGIREF-KKLSSIPKKIDELSSFKIIQVSC 149

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSD-PSQ----------GVQSNLVQDSHTTITS 167
           G+ H + L   G V    K N    G G + PSQ          G+    V        +
Sbjct: 150 GHYHSIALAQDGRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFA 209

Query: 168 LNSPGELYTWGNNEYGQM---GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
           L+  G  Y WG N  GQ+   G   S   ++KP  +  L  L +  I+CG  H+ VL++ 
Sbjct: 210 LSFSGTSYGWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQD 269

Query: 225 VSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYS 284
             +++ FG   + QL          QLI G  +  P  +    DS VS S      +I  
Sbjct: 270 -GKVFTFGSNDSGQLGR--------QLISG--MKGPQVV----DSAVSFS------QIAC 308

Query: 285 GGDHSIV------TVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETL 338
           G  H++        V     G   D    L P   + + N   L         + S++  
Sbjct: 309 GSYHTLAYSCTTGQVISFGCGSQRDPIGPLQPGDAVQNFNISNL---------ISSNDFT 359

Query: 339 DQDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLSLINWFMKLHFSIFGQG 398
           D      ++ +F      N +F+    D   S  + + S  ++S IN  +   +++   G
Sbjct: 360 D----FQVKDIFAG---ANANFVTTLQDTSSSGATGR-SPQQISQINQSLIRKWTMAKFG 411

Query: 399 FGCVCPTVLGDCVPKSWLYLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDC 458
                 +    C          +F SP C+  SFL     +  + N+    VD+Q  +D 
Sbjct: 412 SEECEESRREIC---------EIFSSPACLTASFLM----KRGTGNTNPNDVDLQKVRDT 458

Query: 459 YDTIARIERESVRSLVSNLAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQH 518
           ++ + +         +  L        L+K+L    P  +AL +FL LP      NP+  
Sbjct: 459 FEELTQT------PWIKYLITARLSCFLLKALNLDSPHKDALSIFLLLPECPIMQNPKNW 512

Query: 519 EILHMPFAGAL 529
           + L +PFA AL
Sbjct: 513 KCLVVPFAEAL 523



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 30/195 (15%)

Query: 901  KVAYTAFYMPDLATVCDI-----RIDYFRWISG-RPNGSTRDFLCNYPFIFDAKAKTTLL 954
            KV  + F++ +L+T  D      R  YF+ +S      +      ++PF+FD  +K  +L
Sbjct: 594  KVPESEFHINELSTWLDFLEDLRRFFYFKILSALSVEANNPVIFTHFPFVFDFPSKVNIL 653

Query: 955  EMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKK 1014
             +  R   ++  N+           P T  + L ++V R +++ED +R+L+Q    DFKK
Sbjct: 654  NVYSRAIWKNKTNE-----------PITPPK-LCLKVRRSHLIEDALRQLSQVVDKDFKK 701

Query: 1015 PLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWF 1074
             L             V+F GE   D GGVR+EF   + KE++ P+YGMF   E +  +WF
Sbjct: 702  EL------------LVEFIGEIGLDFGGVRKEFFYYMFKEMIQPEYGMFVYSETSSLMWF 749

Query: 1075 SEDTFEDQNMYFLIG 1089
              +    +  YFL G
Sbjct: 750  PTNPILKKKNYFLFG 764



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 62/96 (64%), Gaps = 3/96 (3%)

Query: 719 HYGITEYEETRSI-WFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            YG+  Y ET S+ WF  +    +   FL G LCGL+I +  ++++PFPLAL+KK+LD+ 
Sbjct: 734 EYGMFVYSETSSLMWFPTNPILKKKNYFLFGILCGLSIASGNVVHLPFPLALFKKLLDKK 793

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
             L+DL++L+P +  +LQ +LD  + D E+ F + F
Sbjct: 794 PSLEDLQELTPEMGNNLQLLLD--DNDNEEEFSLCF 827


>gi|444729790|gb|ELW70194.1| putative E3 ubiquitin-protein ligase HERC6 [Tupaia chinensis]
          Length = 1378

 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 56/253 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    ++S + P+++K LA + ++Q   GY    
Sbjct: 105 GKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFT-PQKIKALAGIKIIQVSCGY---- 159

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL++ G+VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 160 --------YHSLALSEDGQVFSWGKNSHGQLGL-GKEVPSQTSPQRVRSLEGIPLAQVAA 210

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H   L+ SG                                        + WG+N  
Sbjct: 211 GGAHSFALSLSGTS--------------------------------------FGWGSNSA 232

Query: 183 GQMGINNSNTTVT--KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           GQ+ ++ +   V   KP  V +L  L +  I+CG+ H+ VL+++ + +Y FG  S+ QL 
Sbjct: 233 GQLALSGTKAPVQRYKPLSVGALKTLGVVYISCGSEHTAVLTQNGA-VYTFGANSSGQLG 291

Query: 241 SPKSVHKTPQLIH 253
              +  + PQ + 
Sbjct: 292 H-SAEQRGPQCVE 303



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 107/240 (44%), Gaps = 59/240 (24%)

Query: 5    WHSLALND-----CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 59
            +H L L++     CGE+F WG ++HGQLGL      S + P+ V+ LA V +VQ  AG +
Sbjct: 899  FHKLKLDEKKKFLCGELFAWGQNSHGQLGLGRIFPSSPT-PQIVEHLAGVPLVQISAGEA 957

Query: 60   HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ 119
                        HS+AL+  G V++WG +  GQLGL     +S+  P  ++ L S  V  
Sbjct: 958  ------------HSMALSMTGNVYSWGKNDFGQLGL--GHTESKDSPSLLRALDSQKVDF 1003

Query: 120  ACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGN 179
               G SH  +LT  G+V                                      +T+G 
Sbjct: 1004 LACGGSHTALLTQDGLV--------------------------------------FTFGA 1025

Query: 180  NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
             +YGQ+G ++S     +P  V  L+   +  IACG  H+      + +++AFG G   QL
Sbjct: 1026 GKYGQLG-HSSTRDELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNGQL 1084



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 82/160 (51%), Gaps = 25/160 (15%)

Query: 719  HYGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
             YG+  Y EE   +WF      ++   F  G LCGL+++N  + N+PFPLAL+KK+LD+ 
Sbjct: 1236 EYGMFTYPEEASYMWFPAKPKFEEKRYFFFGILCGLSLFNCNVANIPFPLALFKKLLDQI 1295

Query: 778  ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF-----RNWYLLMSDDYFERLILIF 832
              L+DLK+LSP L KSLQ +LD    D  +VF I F     RN   L+ D          
Sbjct: 1296 PSLEDLKELSPVLGKSLQTLLDDESDDFAEVFYIHFNVRWDRNDVDLIPDG--------- 1346

Query: 833  KQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSL 872
              C+I        VD TN +  F+ K S+    L K  +L
Sbjct: 1347 -SCII--------VDQTN-NFVFSGKTSYGAYQLHKCGAL 1376



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 62/96 (64%), Gaps = 1/96 (1%)

Query: 719 HYGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            YG+  Y EE   +WF      ++   FL G LCGL+++N+ + N+PFPLALYKK+LD+ 
Sbjct: 696 EYGLFMYPEEGSCMWFPVSPKFEKKRYFLFGMLCGLSLFNFNVANLPFPLALYKKLLDQQ 755

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
             L+DLK+LSP L K+LQ++L+  E  L +   I F
Sbjct: 756 PSLEDLKELSPLLGKNLQEVLNDEEDGLVEELDIYF 791



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 12/101 (11%)

Query: 989  VEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFL 1048
            + V R ++VED +R+L+Q   +D  K L V             F  E   ++GGV  EF 
Sbjct: 638  LNVRRSHLVEDALRQLSQAEASDLYKILVVG------------FINEIRPESGGVSSEFF 685

Query: 1049 MLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              + +E+  P+YG+F   EE   +WF      ++  YFL G
Sbjct: 686  HCVFEEMTKPEYGLFMYPEEGSCMWFPVSPKFEKKRYFLFG 726



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 31/61 (50%)

Query: 1029 QVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLI 1088
            +V F GE   D GGVR EF   L  E+  P+YGMF   EE   +WF      ++  YF  
Sbjct: 1206 RVSFSGEIGYDFGGVRTEFFYCLFGEMTRPEYGMFTYPEEASYMWFPAKPKFEEKRYFFF 1265

Query: 1089 G 1089
            G
Sbjct: 1266 G 1266



 Score = 40.4 bits (93), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 17/91 (18%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHCLVL 64
            H+  L   G VFT+G   +GQLG  S   + +  P  V  L    V Q AC         
Sbjct: 1010 HTALLTQDGLVFTFGAGKYGQLGHSST--RDELRPCLVTELLGNRVTQIAC--------- 1058

Query: 65   TSTTGLWHSLA-LNDCGEVFTWGGDTHGQLG 94
                G WH+LA +++ G+VF +G   +GQLG
Sbjct: 1059 ----GRWHTLAYVSELGKVFAFGSGKNGQLG 1085


>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
          Length = 1034

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 121/255 (47%), Gaps = 56/255 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+A+   G VFTWG  + GQLG+    K+   +P ++  LA + ++Q   G+    
Sbjct: 88  GKEHSVAVCHQGRVFTWGAGSEGQLGI-GESKEISFMPTKINSLAGIKIIQVSCGH---- 142

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL++ G+VF+WG +  GQLGL   +  SQ+ P++VK L  + + Q  A
Sbjct: 143 --------YHSLALSEDGQVFSWGSNRQGQLGL-GNNLCSQASPQKVKSLEGIPLAQVAA 193

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H   L+  G                                        + WGNN  
Sbjct: 194 GGTHSFALSLMGTS--------------------------------------FGWGNNRS 215

Query: 183 GQMGI--NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           GQ+ +  N++   + KP  + +L  L +  I+CG  H+ VL++   +++ FG  S+ QL 
Sbjct: 216 GQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTED-GQVFTFGGSSSEQLQ 274

Query: 241 -SPKSVHKTPQLIHG 254
            SP+S    PQLI G
Sbjct: 275 HSPRSGRGGPQLIEG 289



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 145/367 (39%), Gaps = 89/367 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL++ G+VF+WG +  GQLGL   +  SQ+ P++VK L  + + Q  AG +   
Sbjct: 141 GHYHSLALSEDGQVFSWGSNRQGQLGL-GNNLCSQASPQKVKSLEGIPLAQVAAGGT--- 196

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLASVSVVQAC 121
                    HS AL+  G  F WG +  GQL L     K Q   P  +  L +++VV   
Sbjct: 197 ---------HSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYIS 247

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            GY H  VLT                                        G+++T+G + 
Sbjct: 248 CGYEHTSVLTED--------------------------------------GQVFTFGGSS 269

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
             Q+  ++  +    PQ +E  +   ++ I CG+ H+          Y +  G  V L  
Sbjct: 270 SEQLQ-HSPRSGRGGPQLIEG-IGGHVSQIECGSYHTIA--------YVYTTGQVVSLGR 319

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTV------TK 295
             S   T    H     S V        LV     + VK I++G   + VT       T 
Sbjct: 320 GPSC--TSNATHQEAACSDVTCLLSAKDLVD----IEVKDIFAGAHANFVTTCRHTRSTS 373

Query: 296 SSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGC 355
            S  +L +  R+  P           L +  R  ++ K  E   +++ L    +F SP C
Sbjct: 374 VSMKILPEIIRITQP-----------LVKKWRAAKKGKVHEDAKREISL----IFSSPAC 418

Query: 356 MNGSFLQ 362
           +  SFL+
Sbjct: 419 LTASFLK 425



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 127/291 (43%), Gaps = 41/291 (14%)

Query: 811  ITF-RNWYLLMSDDYFERLILIFKQCLIYLLQQ--PGVVDSTNGDITFNRKLSFCLQVLQ 867
            +TF RNW+  +       L+ + K+ ++  L    P + D++N  ++    +    ++L+
Sbjct: 518  LTFLRNWWASLEVSSLNSLVQMLKKTIVSQLHNEVPMMKDTSNLKVSL-EMMKEVQKILE 576

Query: 868  KLNS-LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDL-------ATVCDIR 919
            K NS L+NE      ++  + +  +         ++   AF M D+         +   +
Sbjct: 577  KTNSHLHNEVPKMEDTSNLKVLLEVMKEVHEANCQLPENAFIMNDIFNFNTEEGIMAKQQ 636

Query: 920  IDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFN 979
            + + ++ S   N        ++PFI D  +K  L++ D  +++   +            +
Sbjct: 637  MFFIKYYSMVFN--------DFPFILDLPSKIILMKHDSSVKLSDEVKVAA--------S 680

Query: 980  PHTLN-QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
            P  +   +  ++V R ++VEDT+R+L Q    D +K L V             F  E   
Sbjct: 681  PEKMGCPFFILKVRRSHLVEDTLRQLRQAEDFDLRKTLSVG------------FINEIRP 728

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            + GGV  EF   + +E+ DPKY MF   E   ++WF  +   +++ YFL G
Sbjct: 729  EGGGVSSEFFHCIFEEMTDPKYEMFMYPENGSNMWFPVNPKFEKSRYFLFG 779



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 60/97 (61%), Gaps = 12/97 (12%)

Query: 712 YPKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYK 771
           YP+NG N            +WF  +   +++  FL G LCGL++ N  +IN+ FPLALYK
Sbjct: 755 YPENGSN------------MWFPVNPKFEKSRYFLFGILCGLSLNNLNVINLSFPLALYK 802

Query: 772 KILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDV 808
           K+L++   L+DLKDLS  L ++LQ++L+     +E++
Sbjct: 803 KLLEQKPSLEDLKDLSLLLGRNLQEVLNCEAGVIEEL 839



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 80/200 (40%), Gaps = 53/200 (26%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+R++    + +++A +G  H L+L S               V++ G ++ GQLG +S  
Sbjct: 19  PRRLEAGTGLKLLKAASGERHSLLLFSNH------------RVYSCGDNSRGQLGQKSP- 65

Query: 100 KKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQ 159
            +S   P+ ++ L++V +     G  H        V  C                     
Sbjct: 66  -QSTKRPEPIQALSTVHIDLVSCGKEH-------SVAVCHQ------------------- 98

Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                       G ++TWG    GQ+GI  S      P ++ SL  + I  ++CG  HS 
Sbjct: 99  ------------GRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSL 146

Query: 220 VLSKSVSRLYAFGIGSAVQL 239
            LS+   +++++G     QL
Sbjct: 147 ALSED-GQVFSWGSNRQGQL 165



 Score = 40.0 bits (92), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 10/109 (9%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +F SP C+  SFL+  +    +  +    VD++L +D +  +      +    +S+L   
Sbjct: 412 IFSSPACLTASFLKKRD----AGENNFINVDLKLARDVFKML------TAEKWISSLITT 461

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
                L++ L  + P  EAL +FL LP      +P+  + L   FA A+
Sbjct: 462 CLEETLLRGLPYSSPHQEALLVFLLLPECSIMQDPKNWKTLAFEFASAI 510


>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1185

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 121/255 (47%), Gaps = 56/255 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+A+   G VFTWG  + GQLG+    K+   +P ++  LA + ++Q   G+    
Sbjct: 239 GKEHSVAVCHQGRVFTWGAGSEGQLGI-GESKEISFMPTKINSLAGIKIIQVSCGH---- 293

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL++ G+VF+WG +  GQLGL   +  SQ+ P++VK L  + + Q  A
Sbjct: 294 --------YHSLALSEDGQVFSWGSNRQGQLGL-GNNLCSQASPQKVKSLEGIPLAQVAA 344

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H   L+  G                                        + WGNN  
Sbjct: 345 GGTHSFALSLMGTS--------------------------------------FGWGNNRS 366

Query: 183 GQMGI--NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           GQ+ +  N++   + KP  + +L  L +  I+CG  H+ VL++   +++ FG  S+ QL 
Sbjct: 367 GQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTED-GQVFTFGGSSSEQLQ 425

Query: 241 -SPKSVHKTPQLIHG 254
            SP+S    PQLI G
Sbjct: 426 HSPRSGRGGPQLIEG 440



 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 53/221 (23%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L     V++ G ++ GQLG +S   +S   P+ ++ L++V +     G  H 
Sbjct: 186 SGERHSLLLFSNHRVYSCGDNSRGQLGQKSP--QSTKRPEPIQALSTVHIDLVSCGKEH- 242

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      S+A+   G VFTWG  + GQLG+    K+   +P ++  LA + ++Q  
Sbjct: 243 -----------SVAVCHQGRVFTWGAGSEGQLGI-GESKEISFMPTKINSLAGIKIIQVS 290

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H L L+  G                                      ++++WG+N 
Sbjct: 291 CGHYHSLALSEDG--------------------------------------QVFSWGSNR 312

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            GQ+G+ N+  +   PQ+V+SL  +P+A +A G  HSF LS
Sbjct: 313 QGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALS 353



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 145/367 (39%), Gaps = 89/367 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL++ G+VF+WG +  GQLGL   +  SQ+ P++VK L  + + Q  AG +   
Sbjct: 292 GHYHSLALSEDGQVFSWGSNRQGQLGL-GNNLCSQASPQKVKSLEGIPLAQVAAGGT--- 347

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLASVSVVQAC 121
                    HS AL+  G  F WG +  GQL L     K Q   P  +  L +++VV   
Sbjct: 348 ---------HSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYIS 398

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            GY H  VLT                                        G+++T+G + 
Sbjct: 399 CGYEHTSVLTED--------------------------------------GQVFTFGGSS 420

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
             Q+  ++  +    PQ +E  +   ++ I CG+ H+          Y +  G  V L  
Sbjct: 421 SEQLQ-HSPRSGRGGPQLIEG-IGGHVSQIECGSYHTIA--------YVYTTGQVVSLGR 470

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTV------TK 295
             S   T    H     S V        LV     + VK I++G   + VT       T 
Sbjct: 471 GPSC--TSNATHQEAACSDVTCLLSAKDLVD----IEVKDIFAGAHANFVTTCRHTRSTS 524

Query: 296 SSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGC 355
            S  +L +  R+  P           L +  R  ++ K  E   +++ L    +F SP C
Sbjct: 525 VSMKILPEIIRITQP-----------LVKKWRAAKKGKVHEDAKREISL----IFSSPAC 569

Query: 356 MNGSFLQ 362
           +  SFL+
Sbjct: 570 LTASFLK 576



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 127/291 (43%), Gaps = 41/291 (14%)

Query: 811  ITF-RNWYLLMSDDYFERLILIFKQCLIYLLQQ--PGVVDSTNGDITFNRKLSFCLQVLQ 867
            +TF RNW+  +       L+ + K+ ++  L    P + D++N  ++    +    ++L+
Sbjct: 669  LTFLRNWWASLEVSSLNSLVQMLKKTIVSQLHNEVPMMKDTSNLKVSL-EMMKEVQKILE 727

Query: 868  KLNS-LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDL-------ATVCDIR 919
            K NS L+NE      ++  + +  +         ++   AF M D+         +   +
Sbjct: 728  KTNSHLHNEVPKMEDTSNLKVLLEVMKEVHEANCQLPENAFIMNDIFNFNTEEGIMAKQQ 787

Query: 920  IDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFN 979
            + + ++ S   N        ++PFI D  +K  L++ D  +++   +            +
Sbjct: 788  MFFIKYYSMVFN--------DFPFILDLPSKIILMKHDSSVKLSDEVKVAA--------S 831

Query: 980  PHTLN-QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
            P  +   +  ++V R ++VEDT+R+L Q    D +K L V             F  E   
Sbjct: 832  PEKMGCPFFILKVRRSHLVEDTLRQLRQAEDFDLRKTLSVG------------FINEIRP 879

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            + GGV  EF   + +E+ DPKY MF   E   ++WF  +   +++ YFL G
Sbjct: 880  EGGGVSSEFFHCIFEEMTDPKYEMFMYPENGSNMWFPVNPKFEKSRYFLFG 930



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 60/97 (61%), Gaps = 12/97 (12%)

Query: 712 YPKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYK 771
           YP+NG N            +WF  +   +++  FL G LCGL++ N  +IN+ FPLALYK
Sbjct: 906 YPENGSN------------MWFPVNPKFEKSRYFLFGILCGLSLNNLNVINLSFPLALYK 953

Query: 772 KILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDV 808
           K+L++   L+DLKDLS  L ++LQ++L+     +E++
Sbjct: 954 KLLEQKPSLEDLKDLSLLLGRNLQEVLNCEAGVIEEL 990



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 60/222 (27%)

Query: 23  THGQLGLES-----ADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALN 77
           +HG LG+       A  + Q  P+R++    + +++A +G  H L+L S           
Sbjct: 150 SHGWLGIAGMYFTWAPGRRQ--PRRLEAGTGLKLLKAASGERHSLLLFSNH--------- 198

Query: 78  DCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVT 137
               V++ G ++ GQLG +S   +S   P+ ++ L++V +     G  H        V  
Sbjct: 199 ---RVYSCGDNSRGQLGQKSP--QSTKRPEPIQALSTVHIDLVSCGKEH-------SVAV 246

Query: 138 CTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKP 197
           C                                 G ++TWG    GQ+GI  S      P
Sbjct: 247 CHQ-------------------------------GRVFTWGAGSEGQLGIGESKEISFMP 275

Query: 198 QRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
            ++ SL  + I  ++CG  HS  LS+   +++++G     QL
Sbjct: 276 TKINSLAGIKIIQVSCGHYHSLALSED-GQVFSWGSNRQGQL 316



 Score = 40.0 bits (92), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 10/109 (9%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +F SP C+  SFL+  +    +  +    VD++L +D +  +      +    +S+L   
Sbjct: 563 IFSSPACLTASFLKKRD----AGENNFINVDLKLARDVFKML------TAEKWISSLITT 612

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
                L++ L  + P  EAL +FL LP      +P+  + L   FA A+
Sbjct: 613 CLEETLLRGLPYSSPHQEALLVFLLLPECSIMQDPKNWKTLAFEFASAI 661


>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Pan troglodytes]
          Length = 1020

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 175/381 (45%), Gaps = 61/381 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKITTLNGIKIIQVSCGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   +VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 138 --------YHSLALSKDSQVFSWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 123 GYSHCLVLT-----------SSGVVTCTHKENGCGSDP--SQGVQSNL------VQDSHT 163
           G +H   L+           SSG +  + +     S+   S G   NL        D+HT
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHT 248

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            +  L   G+++T+G+N  GQ+G + +      PQ VE +  L ++ I CG+ H+     
Sbjct: 249 AV--LTQDGKVFTFGDNRSGQLGYSPTPEK-RGPQLVERIDGL-VSQIDCGSYHTLAYVH 304

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
           +  ++ +FG G +   D+ K  H +  L     I+    + + ED +  H     VK I+
Sbjct: 305 TTGQVVSFGHGPS---DTSKPTH-SEALTENFDIS---CLISAEDLVDVH-----VKHIF 352

Query: 284 SGGDHSIVTVTK--SSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           +G   + VT  +  SS          ++  +Q +   +  +K    E E  KS+      
Sbjct: 353 AGTYANFVTTHQDTSSTRAPGKTLPEISRISQSMAEKWIAVKRRSTEHEMAKSE------ 406

Query: 342 LLLYLETVFLSPGCMNGSFLQ 362
               +  +F SP C+  SFL+
Sbjct: 407 ----IRMIFSSPACLTASFLK 423



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 106/254 (41%), Gaps = 63/254 (24%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L     V + G ++ GQLG   A +    +P+ ++ L +++V     G  H 
Sbjct: 30  SGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGE--LPEPIQALETLTVDLVSCGKEH- 86

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      SLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q  
Sbjct: 87  -----------SLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKITTLNGIKIIQVS 134

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H L L+                           +DS           ++++WG N 
Sbjct: 135 CGHYHSLALS---------------------------KDS-----------QVFSWGKNS 156

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL----------SKSVSRLYAF 231
           +GQ+G+     +   PQRV SL  +P+A +A G  HSF L          S S  +L   
Sbjct: 157 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALS 216

Query: 232 GIGSAVQLDSPKSV 245
           G    VQ + P SV
Sbjct: 217 GRNVPVQSNKPLSV 230



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 1/80 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   FL G LCGL+++N  + N+PFPLALYKK+LD+  
Sbjct: 733 YGMFMYPEMGSCMWFPAKPKPEKKRYFLFGILCGLSLFNLNVANLPFPLALYKKLLDQKP 792

Query: 779 LLQDLKDLSPTLAKSLQDIL 798
            L+DLK+LSP L KSLQ++L
Sbjct: 793 SLEDLKELSPRLGKSLQEVL 812



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 16/177 (9%)

Query: 917  DIRIDYFRWISGRPNGSTRDFL-CNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYL-- 973
            D R  +FR     P  + R  +  ++PFIF+  +K  LL+ D  I+M+ + N+    +  
Sbjct: 598  DRRRQFFRDNHLIPAETPRPVIFSDFPFIFNLLSKIKLLQADSLIKMQMSENKAYMPMHE 657

Query: 974  -FLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKF 1032
              LQ  +    +    ++V R  +V+D +R+L+Q    DF K L             V+F
Sbjct: 658  TILQKKDEFPPSPRFILKVRRSRLVKDALRQLSQAEATDFCKVL------------VVEF 705

Query: 1033 RGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              E   ++GGV  EF   + +E+  P+YGMF   E    +WF      ++  YFL G
Sbjct: 706  INEICPESGGVSSEFFHCMFEEMTKPEYGMFMYPEMGSCMWFPAKPKPEKKRYFLFG 762


>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
           member 6 [Xenopus laevis]
 gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
          Length = 1028

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 131/260 (50%), Gaps = 36/260 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+A+ D G +++WG  + GQLG      K+ + PKR+ GL +  ++Q   G     
Sbjct: 92  GTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFT-PKRITGLLNRKIIQISCGN---- 146

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HS+AL + G VF+WG +  GQLGL S    +Q+ P+ VK L  + +VQ  A
Sbjct: 147 --------FHSVALAEDGRVFSWGQNKCGQLGLGS-QIINQATPQLVKSLKGIPLVQVTA 197

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDS--------------HTT 164
           G S    L+ SG V    + N    G  +D  +G       DS              HT 
Sbjct: 198 GGSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTA 257

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
           +  LN  G +YT+G++ YGQ+G  + N T + PQ++E   +  ++ +ACG  H+ +   +
Sbjct: 258 V--LNKDGIVYTFGDDTYGQLGQQSGNQT-SVPQKIEEY-SRQVSQVACGRYHTLLYVFT 313

Query: 225 VSRLYAFGIGSAVQLDSPKS 244
            +R+ +FG GS  Q  + +S
Sbjct: 314 CNRIVSFGKGSQRQQGNDES 333



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 102/237 (43%), Gaps = 56/237 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSL L   G + + G + +GQLG     K + S  +++  L + ++V    G +H  
Sbjct: 42  GEKHSLYLLKDGTLLSCGQNPYGQLG----RKGNNSRIEQISSLEAQTIVDVSCGTNH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ D G +++WG  + GQLG      K+ + PKR+ GL +  ++Q   
Sbjct: 96  ----------SVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFT-PKRITGLLNRKIIQISC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H + L   G V                                      ++WG N+ 
Sbjct: 145 GNFHSVALAEDGRV--------------------------------------FSWGQNKC 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           GQ+G+ +       PQ V+SL  +P+  +  G + +F LS S   ++A+G  +A QL
Sbjct: 167 GQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMS-GTVFAWGRNNAGQL 222



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 48/68 (70%)

Query: 732 WFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPTLA 791
           WF      ++   F  G +CGLA+YN T+I +PFPLAL+KK+LD+   L+DLK++ PT+ 
Sbjct: 760 WFPSTPLVEKKKYFYFGVICGLAVYNQTVIYLPFPLALFKKLLDKKATLEDLKEIQPTMG 819

Query: 792 KSLQDILD 799
           + +QD+LD
Sbjct: 820 RGMQDLLD 827



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 18/176 (10%)

Query: 920  IDYFRWISGRPNGSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLF-- 974
            ++ +R    +P    + F    C +PF+F+   K  +L+ D   +    + Q    L   
Sbjct: 613  VNNWRLWQSQPEPDEKAFPAIYCRFPFVFNFPTKVQVLDFDSMQKRNTVILQAQKQLVQN 672

Query: 975  -LQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFR 1033
             LQ  +      +L + +  D++VED + +L+     + KK L             V+F+
Sbjct: 673  RLQGRSDLPDIPFLHLVLRLDHLVEDALHKLSIVEDPNLKKDL------------LVEFQ 720

Query: 1034 GEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            GE   D   V++EF ++LL+ +++P YGMF   +     WF      ++  YF  G
Sbjct: 721  GESTRDPVTVKKEFFLVLLESMVNPDYGMFSCSDPLLPRWFPSTPLVEKKKYFYFG 776



 Score = 43.9 bits (102), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 15/103 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+  LN  G V+T+G DT+GQLG +S ++   S+P++++   S  V Q   G  H L
Sbjct: 252 GEEHTAVLNKDGIVYTFGDDTYGQLGQQSGNQT--SVPQKIEEY-SRQVSQVACGRYHTL 308

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQS 104
           +   T           C  + ++G  +  Q G  ES+D+   S
Sbjct: 309 LYVFT-----------CNRIVSFGKGSQRQQGNDESSDQAEAS 340


>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
          Length = 1020

 Score =  118 bits (295), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 175/381 (45%), Gaps = 61/381 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKITTLNGIKIIQVSCGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   +VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 138 --------YHSLALSKDSQVFSWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 123 GYSHCLVLT-----------SSGVVTCTHKENGCGSDP--SQGVQSNL------VQDSHT 163
           G +H   L+           SSG +  + +     S+   S G   NL        D+HT
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHT 248

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            +  L   G+++T+G+N  GQ+G + +      PQ VE +  L ++ I CG+ H+     
Sbjct: 249 AV--LTQDGKVFTFGDNRSGQLGYSPTPEK-RGPQLVERIDGL-VSQIDCGSYHTLAYVH 304

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
           +  ++ +FG G +   D+ K  H +  L     I+    + + ED +  H     VK I+
Sbjct: 305 TTGQVVSFGHGPS---DTSKPTH-SEALTENFDIS---CLISAEDLVDVH-----VKHIF 352

Query: 284 SGGDHSIVTVTK--SSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           +G   + VT  +  SS          ++  +Q +   +  +K    E E  KS+      
Sbjct: 353 AGTYANFVTTHQDTSSTRAPGKTLPEISRISQSMAEKWIAVKRRSTEHEMAKSE------ 406

Query: 342 LLLYLETVFLSPGCMNGSFLQ 362
               +  +F SP C+  SFL+
Sbjct: 407 ----IRMIFSSPACLTASFLK 423



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 106/254 (41%), Gaps = 63/254 (24%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L     V + G ++ GQLG   A +    +P+ ++ L +++V     G  H 
Sbjct: 30  SGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGE--LPEPIQALETLTVDLVSCGKEH- 86

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      SLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q  
Sbjct: 87  -----------SLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKITTLNGIKIIQVS 134

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H L L+                           +DS           ++++WG N 
Sbjct: 135 CGHYHSLALS---------------------------KDS-----------QVFSWGKNS 156

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL----------SKSVSRLYAF 231
           +GQ+G+     +   PQRV SL  +P+A +A G  HSF L          S S  +L   
Sbjct: 157 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALS 216

Query: 232 GIGSAVQLDSPKSV 245
           G    VQ + P SV
Sbjct: 217 GRNVPVQSNKPLSV 230



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 1/80 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   FL G LCGL+++N  + N+PFPLALYKK+LD+  
Sbjct: 733 YGMFMYPEMGSCMWFPAKPKPEKKRYFLFGILCGLSLFNLNVANLPFPLALYKKLLDQKP 792

Query: 779 LLQDLKDLSPTLAKSLQDIL 798
            L+DLK+LSP L KSLQ++L
Sbjct: 793 SLEDLKELSPRLGKSLQEVL 812



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 15/153 (9%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYL---FLQTFNPHTLNQYLEVEVSRDNI 996
            ++PFIF+  +K  LL+ D  I+M+ + N+    +    LQ  +    +    ++V R  +
Sbjct: 622  DFPFIFNLLSKIKLLQADSLIKMQMSENKAYMPMHETILQKKDEFPPSPRFILKVRRSRL 681

Query: 997  VEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEIL 1056
            V+D +R+L+Q    DF K L             V+F  E   ++GGV  EF   + +E+ 
Sbjct: 682  VKDALRQLSQAEATDFCKVL------------VVEFINEICPESGGVSSEFFHCMFEEMT 729

Query: 1057 DPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             P+YGMF   E    +WF      ++  YFL G
Sbjct: 730  KPEYGMFMYPEMGSCMWFPAKPKPEKKRYFLFG 762


>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
 gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           6
 gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
 gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
 gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
          Length = 1022

 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 172/385 (44%), Gaps = 69/385 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIMTLNDIKIIQVSCGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   +VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 138 --------YHSLALSKDSQVFSWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 123 GYSHC-------------------LVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHT 163
           G +H                    L L+   V   ++K    G+  + GV      D+HT
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHT 248

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            +  L   G+++T+G+N  GQ+G + +      PQ VE +  L ++ I CG+ H+     
Sbjct: 249 AV--LTQDGKVFTFGDNRSGQLGYSPTPEK-RGPQLVERIDGL-VSQIDCGSYHTLAYVH 304

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSG--GLVV 279
           +  ++ +FG G +   D+ K  H             P A+T   D   L+S      + V
Sbjct: 305 TTGQVVSFGHGPS---DTSKPTH-------------PEALTENFDISCLISAEDFVDVQV 348

Query: 280 KKIYSGGDHSIVTVTK--SSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDET 337
           K I++G   + VT  +  SS          ++  +Q +   +  +K    E E  KS+  
Sbjct: 349 KHIFAGTYANFVTTHQDTSSTRAPGKTLPEISRISQSMAEKWIAVKRRSTEHEMAKSE-- 406

Query: 338 LDQDLLLYLETVFLSPGCMNGSFLQ 362
                   +  +F SP C+  SFL+
Sbjct: 407 --------IRMIFSSPACLTASFLK 423



 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 54/238 (22%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L     V + G ++ GQLG   A +    +P+ ++ L ++            
Sbjct: 30  SGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGE--LPEPIQALETL------------ 75

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           +V   + G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q  
Sbjct: 76  IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIMTLNDIKIIQVS 134

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H L L+                           +DS           ++++WG N 
Sbjct: 135 CGHYHSLALS---------------------------KDS-----------QVFSWGKNS 156

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           +GQ+G+     +   PQRV SL  +P+A +A G  HSF LS   +  + +G  SA QL
Sbjct: 157 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTS-FGWGSNSAGQL 213



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 1/80 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   FL G LCGL+++N  + N+PFPLALYKK+LD+  
Sbjct: 733 YGMFMYPEMGSCMWFPAKPKPEKKRYFLFGMLCGLSLFNLNVANLPFPLALYKKLLDQKP 792

Query: 779 LLQDLKDLSPTLAKSLQDIL 798
            L+DLK+LSP L KSLQ++L
Sbjct: 793 SLEDLKELSPRLGKSLQEVL 812



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 19/155 (12%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLF-----LQTFNPHTLNQYLEVEVSRD 994
            ++PFIF++ +K  LL+ D  I+M+  M++   Y+      LQ  +    +    + V R 
Sbjct: 622  DFPFIFNSLSKIKLLQADSHIKMQ--MSEKKAYMLMHETILQKKDEFPPSPRFILRVRRS 679

Query: 995  NIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKE 1054
             +V+D +R+L+Q    DF K L V            +F  E   ++GGV  EF   + +E
Sbjct: 680  RLVKDALRQLSQAEATDFCKVLVV------------EFINEICPESGGVSSEFFHCMFEE 727

Query: 1055 ILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +  P+YGMF   E    +WF      ++  YFL G
Sbjct: 728  MTKPEYGMFMYPEMGSCMWFPAKPKPEKKRYFLFG 762


>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1149

 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 121/255 (47%), Gaps = 56/255 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+A+   G VFTWG  + GQLG+    K+   +P ++  LA + ++Q   G+    
Sbjct: 239 GKEHSVAVCHQGRVFTWGAGSEGQLGI-GESKEISFMPTKINSLAGIKIIQVSCGH---- 293

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL++ G+VF+WG +  GQLGL   +  SQ+ P++VK L  + + Q  A
Sbjct: 294 --------YHSLALSEDGQVFSWGSNRQGQLGL-GNNLCSQASPQKVKSLEGIPLAQVAA 344

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H   L+  G                                        + WGNN  
Sbjct: 345 GGTHSFALSLMGTS--------------------------------------FGWGNNRS 366

Query: 183 GQMGI--NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           GQ+ +  N++   + KP  + +L  L +  I+CG  H+ VL++   +++ FG  S+ QL 
Sbjct: 367 GQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTED-GQVFTFGGSSSEQLQ 425

Query: 241 -SPKSVHKTPQLIHG 254
            SP+S    PQLI G
Sbjct: 426 HSPRSGRGGPQLIEG 440



 Score = 96.3 bits (238), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 53/221 (23%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L     V++ G ++ GQLG +S   +S   P+ ++ L++V +     G  H 
Sbjct: 186 SGERHSLLLFSNHRVYSCGDNSRGQLGQKSP--QSTKRPEPIQALSTVHIDLVSCGKEH- 242

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      S+A+   G VFTWG  + GQLG+    K+   +P ++  LA + ++Q  
Sbjct: 243 -----------SVAVCHQGRVFTWGAGSEGQLGI-GESKEISFMPTKINSLAGIKIIQVS 290

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H L L+  G                                      ++++WG+N 
Sbjct: 291 CGHYHSLALSEDG--------------------------------------QVFSWGSNR 312

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            GQ+G+ N+  +   PQ+V+SL  +P+A +A G  HSF LS
Sbjct: 313 QGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALS 353



 Score = 89.7 bits (221), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 145/367 (39%), Gaps = 89/367 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL++ G+VF+WG +  GQLGL   +  SQ+ P++VK L  + + Q  AG +   
Sbjct: 292 GHYHSLALSEDGQVFSWGSNRQGQLGL-GNNLCSQASPQKVKSLEGIPLAQVAAGGT--- 347

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLASVSVVQAC 121
                    HS AL+  G  F WG +  GQL L     K Q   P  +  L +++VV   
Sbjct: 348 ---------HSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYIS 398

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            GY H  VLT                                        G+++T+G + 
Sbjct: 399 CGYEHTSVLTED--------------------------------------GQVFTFGGSS 420

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
             Q+  ++  +    PQ +E  +   ++ I CG+ H+          Y +  G  V L  
Sbjct: 421 SEQLQ-HSPRSGRGGPQLIEG-IGGHVSQIECGSYHTIA--------YVYTTGQVVSLGR 470

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTV------TK 295
             S   T    H     S V        LV     + VK I++G   + VT       T 
Sbjct: 471 GPSC--TSNATHQEAACSDVTCLLSAKDLVD----IEVKDIFAGAHANFVTTCRHTRSTS 524

Query: 296 SSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGC 355
            S  +L +  R+  P           L +  R  ++ K  E   +++ L    +F SP C
Sbjct: 525 VSMKILPEIIRITQP-----------LVKKWRAAKKGKVHEDAKREISL----IFSSPAC 569

Query: 356 MNGSFLQ 362
           +  SFL+
Sbjct: 570 LTASFLK 576



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 119/276 (43%), Gaps = 41/276 (14%)

Query: 811  ITF-RNWYLLMSDDYFERLILIFKQCLIYLLQQ--PGVVDSTNGDITFNRKLSFCLQVLQ 867
            +TF RNW+  +       L+ + K+ ++  L    P + D++N  ++    +    ++L+
Sbjct: 669  LTFLRNWWASLEVSSLNSLVQMLKKTIVSQLHNEVPMMKDTSNLKVSL-EMMKEVQKILE 727

Query: 868  KLNS-LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDL-------ATVCDIR 919
            K NS L+NE      ++  + +  +         ++   AF M D+         +   +
Sbjct: 728  KTNSHLHNEVPKMEDTSNLKVLLEVMKEVHEANCQLPENAFIMNDIFNFNTEEGIMAKQQ 787

Query: 920  IDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFN 979
            + + ++ S   N        ++PFI D  +K  L++ D  +++   +            +
Sbjct: 788  MFFIKYYSMVFN--------DFPFILDLPSKIILMKHDSSVKLSDEVKVAA--------S 831

Query: 980  PHTLN-QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
            P  +   +  ++V R ++VEDT+R+L Q    D +K L V             F  E   
Sbjct: 832  PEKMGCPFFILKVRRSHLVEDTLRQLRQAEDFDLRKTLSVG------------FINEIRP 879

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWF 1074
            + GGV  EF   + +E+ DPKY MF   E   ++WF
Sbjct: 880  EGGGVSSEFFHCIFEEMTDPKYEMFMYPENGSNMWF 915



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 60/222 (27%)

Query: 23  THGQLGLES-----ADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALN 77
           +HG LG+       A  + Q  P+R++    + +++A +G  H L+L S           
Sbjct: 150 SHGWLGIAGMYFTWAPGRRQ--PRRLEAGTGLKLLKAASGERHSLLLFSNH--------- 198

Query: 78  DCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVT 137
               V++ G ++ GQLG +S   +S   P+ ++ L++V +     G  H        V  
Sbjct: 199 ---RVYSCGDNSRGQLGQKSP--QSTKRPEPIQALSTVHIDLVSCGKEH-------SVAV 246

Query: 138 CTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKP 197
           C                                 G ++TWG    GQ+GI  S      P
Sbjct: 247 CHQ-------------------------------GRVFTWGAGSEGQLGIGESKEISFMP 275

Query: 198 QRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
            ++ SL  + I  ++CG  HS  LS+   +++++G     QL
Sbjct: 276 TKINSLAGIKIIQVSCGHYHSLALSED-GQVFSWGSNRQGQL 316



 Score = 40.0 bits (92), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 10/109 (9%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +F SP C+  SFL+  +    +  +    VD++L +D +  +      +    +S+L   
Sbjct: 563 IFSSPACLTASFLKKRD----AGENNFINVDLKLARDVFKML------TAEKWISSLITT 612

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
                L++ L  + P  EAL +FL LP      +P+  + L   FA A+
Sbjct: 613 CLEETLLRGLPYSSPHQEALLVFLLLPECSIMQDPKNWKTLAFEFASAI 661


>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Nomascus leucogenys]
          Length = 1020

 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 168/404 (41%), Gaps = 107/404 (26%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGIGEL-KEISFTPKKITTLNGIKIIQVSCGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   +VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 138 --------YHSLALSKDSQVFSWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H   L+             CG+                           + WG+N  
Sbjct: 189 GGAHSFALSL------------CGTS--------------------------FGWGSNSA 210

Query: 183 GQMGINNSNTTV--TKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           GQ+ ++  N  V   KP  V +L NL +  I+CGA H+ VL++   +++ FG   + QL 
Sbjct: 211 GQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQD-GKVFTFGDNRSGQLG 269

Query: 241 -SPKSVHKTPQLI-------------------------------HGPWIAS----PVAMT 264
            SP    + PQL+                               HGP        P A+T
Sbjct: 270 YSPTPEKRGPQLVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFGHGPSDTGKPTHPEALT 329

Query: 265 AGED--SLVSHSG--GLVVKKIYSGGDHSIVTVTK--SSDGVLSDDFRVLNPATQILDVN 318
              D   L+S     G+ VK I++G   + VT  +  SS          ++  +Q +   
Sbjct: 330 ENFDISCLISAEDLVGVQVKHIFAGTYANFVTTHQDTSSTRAPGKTLPEISRISQSMAEK 389

Query: 319 FERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSFLQ 362
           +  +K    E E  KS+          +  +F SP C+  SFL+
Sbjct: 390 WIAVKRRSTEHEVAKSE----------IRMIFSSPACLTASFLK 423



 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 104/238 (43%), Gaps = 54/238 (22%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L     V + G ++ GQLG   A +    +P+ ++ L +++V     G  H 
Sbjct: 30  SGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGE--LPEPIQALETLNVDLVSCGKEH- 86

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      SLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q  
Sbjct: 87  -----------SLAVCHKGRVFAWGAGSEGQLGIGEL-KEISFTPKKITTLNGIKIIQVS 134

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H L L+                           +DS           ++++WG N 
Sbjct: 135 CGHYHSLALS---------------------------KDS-----------QVFSWGKNS 156

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           +GQ+G+     +   PQRV SL  +P+A +A G  HSF LS   +  + +G  SA QL
Sbjct: 157 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTS-FGWGSNSAGQL 213



 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 1/95 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   FL G LCGL+++N  + N+PFPLALYKK+LD+  
Sbjct: 733 YGMFMYPEMGSCMWFPAKPKLEKKRYFLFGMLCGLSLFNLNVANLPFPLALYKKLLDQKP 792

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP + KSLQ++L+    D+ D   I F
Sbjct: 793 SLEDLKELSPRVGKSLQEVLNDDADDIGDALCIHF 827



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 20/179 (11%)

Query: 917  DIRIDYFRWISGRPNGSTRDFL-CNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLF- 974
            D R   FR     P G+    +  ++PFIF+  +K  LL+ D  I+M+  M++   Y+  
Sbjct: 598  DRRRQLFRDNHLIPAGTPSPVIFSDFPFIFNLLSKIKLLQADSCIKMQ--MSEEKAYMLM 655

Query: 975  ----LQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQV 1030
                LQ  +    +    + V R ++V+D +R+L+Q    DF K L             V
Sbjct: 656  HETVLQKKDEFPPSPRFILRVKRSHLVKDALRQLSQAEATDFCKVL------------VV 703

Query: 1031 KFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +F  E   ++GGV  EF   + +E+  P+YGMF   E    +WF      ++  YFL G
Sbjct: 704  EFINEICPESGGVSSEFFHCMFEEMTKPEYGMFMYPEMGSCMWFPAKPKLEKKRYFLFG 762


>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
 gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
          Length = 897

 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 124/252 (49%), Gaps = 56/252 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESAD-KKSQSIPKRVKGLASVSVVQACAGYSHC 61
           G  H+LA+ND   ++ WG ++ GQLG+   + K+    P+++K L+  +VVQ   G SH 
Sbjct: 93  GANHNLAINDKNCIYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSH- 151

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      SLA+ + G VF+WG + +GQLG++S    S   PK++  L+   +VQ  
Sbjct: 152 -----------SLAVINDGTVFSWGSNRYGQLGIDS--NVSSVEPKQILKLSGFYIVQIA 198

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
           AG +H L +T+SG                                       L TWG N 
Sbjct: 199 AGGAHSLAITNSGA--------------------------------------LLTWGKNS 220

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD- 240
           +GQ+G+  +N  V  P  V SL +  IA  ACG +H+ VL+K    ++ FG GS+ QL  
Sbjct: 221 FGQLGL-GTNDGVLSPTCVSSLRSQHIAYAACGEDHTAVLTKE-GGVFTFGAGSSGQLGH 278

Query: 241 SPKSVHKTPQLI 252
           +  S H +PQ++
Sbjct: 279 NSLSHHCSPQMV 290



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 23/195 (11%)

Query: 902  VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQ 961
            ++YT FY+ ++    +I  DY RW+            C+YPF+ D   KT LL++D +I 
Sbjct: 505  ISYTQFYLTEILQYINIEDDYIRWVKNVKGL----IFCHYPFLLDTLVKTRLLDLDTKIL 560

Query: 962  MEHAMNQTNFYLFLQTFNPHTLNQ-------YLEVEVSRDNIVEDTIRELAQYTTNDFKK 1014
             ++ M     Y   Q  + +  N        +L + V R+N++ DT+ ++ + +   F+K
Sbjct: 561  QQNVMQGIARYNMNQILSVNGTNTTVALVQPFLVLTVKRENLLRDTLEQIIRSSPETFRK 620

Query: 1015 PLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWF 1074
            PLK+            +F  E+A D GGVR+EF +L+++EI DPKYGMF+  E++   WF
Sbjct: 621  PLKI------------EFVNEDAVDEGGVRKEFFLLIIREIFDPKYGMFQVIEDSNMTWF 668

Query: 1075 SEDTFEDQNMYFLIG 1089
            ++    D    F  G
Sbjct: 669  ADKANIDMISTFFRG 683


>gi|79295482|ref|NP_001030623.1| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
 gi|332640300|gb|AEE73821.1| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
          Length = 310

 Score =  117 bits (293), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 90/271 (33%), Positives = 133/271 (49%), Gaps = 35/271 (12%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           ++G  +SLA+ D G +FTWG +  G LG    + K+++IP RVK LA+V + QA      
Sbjct: 44  VSGSRNSLAICDDGTMFTWGWNQRGTLG-HQPETKTENIPSRVKALANVKITQA------ 96

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD-------KKSQSIPKRVKGLA 113
                   G WH LA++D G  + WGG+ +GQ G E          ++   IPKR     
Sbjct: 97  ------AIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCA--P 148

Query: 114 SVSVVQACAGYSHCLVLTSSGVVTCTHKENGCG-----SDP--SQGVQS-NLVQDSHTTI 165
            ++V Q  AG +H +VLT  G V    +    G     S P   QG+++  L+       
Sbjct: 149 KLTVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHN 208

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L   G L  WGNNEYGQ+G  ++  T + P  V+ L +L +  IA G  HS  L+   
Sbjct: 209 LALEEDGRLLAWGNNEYGQLGTGDTQPT-SHPVPVQGLDDLTLVDIAAGGWHSTALTDK- 266

Query: 226 SRLYAFGIGSAVQL---DSPKSVHKTPQLIH 253
             +Y +G G   +L   D+ KS    PQ ++
Sbjct: 267 GEVYGWGRGEHGRLGLGDNDKSSKMVPQKVN 297



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 14/117 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+LAL + G +  WG + +GQLG  + D +  S P  V+GL  +++V   AG     
Sbjct: 204 GAFHNLALEEDGRLLAWGNNEYGQLG--TGDTQPTSHPVPVQGLDDLTLVDIAAGG---- 257

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ 119
                   WHS AL D GEV+ WG   HG+LGL   DK S+ +P++V  LA   ++Q
Sbjct: 258 --------WHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQ 306



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 75/260 (28%), Positives = 116/260 (44%), Gaps = 51/260 (19%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           +  WG    GQLG+ + ++K  +            VV+A   YS   V +  +G  +SLA
Sbjct: 7   IIAWGSGEDGQLGIGTNEEKEWA-----------CVVEALEPYS---VRSVVSGSRNSLA 52

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           + D G +FTWG +  G LG    + K+++IP RVK LA+V + QA  G  HCL +   G 
Sbjct: 53  ICDDGTMFTWGWNQRGTLG-HQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGR 111

Query: 136 VTC--THKENGCGSDP-----SQGVQSNLV----------------QDSHTTITSLNSPG 172
                 ++   CG +P      + V+ ++V                  +H+ +  L   G
Sbjct: 112 AYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVV--LTREG 169

Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
            ++TW     GQ         ++ P RV+ L N  + LIA GA H+  L +   RL A+G
Sbjct: 170 HVWTW-----GQPWPPGDIKQISVPVRVQGLEN--VRLIAVGAFHNLALEED-GRLLAWG 221

Query: 233 IGSAVQL---DSPKSVHKTP 249
                QL   D+  + H  P
Sbjct: 222 NNEYGQLGTGDTQPTSHPVP 241



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 63/243 (25%), Positives = 96/243 (39%), Gaps = 84/243 (34%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESAD-------KKSQSIPKRVKGLASVSVVQAC 55
           G WH LA++D G  + WGG+ +GQ G E          ++   IPKR      ++V Q  
Sbjct: 99  GGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCA--PKLTVRQVA 156

Query: 56  AGYSHCLVLTSTTGLW----------------------------------HSLALNDCGE 81
           AG +H +VLT    +W                                  H+LAL + G 
Sbjct: 157 AGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGR 216

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHK 141
           +  WG + +GQLG  + D +  S P  V+GL  +++V   AG  H               
Sbjct: 217 LLAWGNNEYGQLG--TGDTQPTSHPVPVQGLDDLTLVDIAAGGWHS-------------- 260

Query: 142 ENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGI-NNSNTTVTKPQRV 200
                                   T+L   GE+Y WG  E+G++G+ +N  ++   PQ+V
Sbjct: 261 ------------------------TALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKV 296

Query: 201 ESL 203
             L
Sbjct: 297 NLL 299


>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Pan troglodytes]
          Length = 984

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 175/381 (45%), Gaps = 61/381 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKITTLNGIKIIQVSCGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   +VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 138 --------YHSLALSKDSQVFSWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 123 GYSHCLVLT-----------SSGVVTCTHKENGCGSDP--SQGVQSNL------VQDSHT 163
           G +H   L+           SSG +  + +     S+   S G   NL        D+HT
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHT 248

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            +  L   G+++T+G+N  GQ+G + +      PQ VE +  L ++ I CG+ H+     
Sbjct: 249 AV--LTQDGKVFTFGDNRSGQLGYSPTPEK-RGPQLVERIDGL-VSQIDCGSYHTLAYVH 304

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
           +  ++ +FG G +   D+ K  H +  L     I+    + + ED +  H     VK I+
Sbjct: 305 TTGQVVSFGHGPS---DTSKPTH-SEALTENFDIS---CLISAEDLVDVH-----VKHIF 352

Query: 284 SGGDHSIVTVTK--SSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           +G   + VT  +  SS          ++  +Q +   +  +K    E E  KS+      
Sbjct: 353 AGTYANFVTTHQDTSSTRAPGKTLPEISRISQSMAEKWIAVKRRSTEHEMAKSE------ 406

Query: 342 LLLYLETVFLSPGCMNGSFLQ 362
               +  +F SP C+  SFL+
Sbjct: 407 ----IRMIFSSPACLTASFLK 423



 Score = 89.7 bits (221), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 106/254 (41%), Gaps = 63/254 (24%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L     V + G ++ GQLG   A +    +P+ ++ L +++V     G  H 
Sbjct: 30  SGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGE--LPEPIQALETLTVDLVSCGKEH- 86

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      SLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q  
Sbjct: 87  -----------SLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKITTLNGIKIIQVS 134

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H L L+                           +DS           ++++WG N 
Sbjct: 135 CGHYHSLALS---------------------------KDS-----------QVFSWGKNS 156

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL----------SKSVSRLYAF 231
           +GQ+G+     +   PQRV SL  +P+A +A G  HSF L          S S  +L   
Sbjct: 157 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALS 216

Query: 232 GIGSAVQLDSPKSV 245
           G    VQ + P SV
Sbjct: 217 GRNVPVQSNKPLSV 230



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 1/80 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   FL G LCGL+++N  + N+PFPLALYKK+LD+  
Sbjct: 697 YGMFMYPEMGSCMWFPAKPKPEKKRYFLFGILCGLSLFNLNVANLPFPLALYKKLLDQKP 756

Query: 779 LLQDLKDLSPTLAKSLQDIL 798
            L+DLK+LSP L KSLQ++L
Sbjct: 757 SLEDLKELSPRLGKSLQEVL 776



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 20/142 (14%)

Query: 956  MDQRIQM---EHAMNQTNFYL-----FLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQY 1007
            +D+R Q     H M++   Y+      LQ  +    +    ++V R  +V+D +R+L+Q 
Sbjct: 597  IDRRRQFFRDNHLMSENKAYMPMHETILQKKDEFPPSPRFILKVRRSRLVKDALRQLSQA 656

Query: 1008 TTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYE 1067
               DF K L             V+F  E   ++GGV  EF   + +E+  P+YGMF   E
Sbjct: 657  EATDFCKVL------------VVEFINEICPESGGVSSEFFHCMFEEMTKPEYGMFMYPE 704

Query: 1068 ETRSIWFSEDTFEDQNMYFLIG 1089
                +WF      ++  YFL G
Sbjct: 705  MGSCMWFPAKPKPEKKRYFLFG 726


>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
 gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
          Length = 986

 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 172/385 (44%), Gaps = 69/385 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIMTLNDIKIIQVSCGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   +VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 138 --------YHSLALSKDSQVFSWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 123 GYSHC-------------------LVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHT 163
           G +H                    L L+   V   ++K    G+  + GV      D+HT
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHT 248

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            +  L   G+++T+G+N  GQ+G + +      PQ VE +  L ++ I CG+ H+     
Sbjct: 249 AV--LTQDGKVFTFGDNRSGQLGYSPTPEK-RGPQLVERIDGL-VSQIDCGSYHTLAYVH 304

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSG--GLVV 279
           +  ++ +FG G +   D+ K  H             P A+T   D   L+S      + V
Sbjct: 305 TTGQVVSFGHGPS---DTSKPTH-------------PEALTENFDISCLISAEDFVDVQV 348

Query: 280 KKIYSGGDHSIVTVTK--SSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDET 337
           K I++G   + VT  +  SS          ++  +Q +   +  +K    E E  KS+  
Sbjct: 349 KHIFAGTYANFVTTHQDTSSTRAPGKTLPEISRISQSMAEKWIAVKRRSTEHEMAKSE-- 406

Query: 338 LDQDLLLYLETVFLSPGCMNGSFLQ 362
                   +  +F SP C+  SFL+
Sbjct: 407 --------IRMIFSSPACLTASFLK 423



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 54/238 (22%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L     V + G ++ GQLG   A +    +P+ ++ L ++            
Sbjct: 30  SGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGE--LPEPIQALETL------------ 75

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           +V   + G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q  
Sbjct: 76  IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIMTLNDIKIIQVS 134

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H L L+                           +DS           ++++WG N 
Sbjct: 135 CGHYHSLALS---------------------------KDS-----------QVFSWGKNS 156

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           +GQ+G+     +   PQRV SL  +P+A +A G  HSF LS   +  + +G  SA QL
Sbjct: 157 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTS-FGWGSNSAGQL 213



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 1/80 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   FL G LCGL+++N  + N+PFPLALYKK+LD+  
Sbjct: 697 YGMFMYPEMGSCMWFPAKPKPEKKRYFLFGMLCGLSLFNLNVANLPFPLALYKKLLDQKP 756

Query: 779 LLQDLKDLSPTLAKSLQDIL 798
            L+DLK+LSP L KSLQ++L
Sbjct: 757 SLEDLKELSPRLGKSLQEVL 776



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 17/131 (12%)

Query: 964  HAMNQTNFYLF-----LQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKV 1018
            H M++   Y+      LQ  +    +    + V R  +V+D +R+L+Q    DF K L V
Sbjct: 608  HLMSEKKAYMLMHETILQKKDEFPPSPRFILRVRRSRLVKDALRQLSQAEATDFCKVLVV 667

Query: 1019 NDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDT 1078
                        +F  E   ++GGV  EF   + +E+  P+YGMF   E    +WF    
Sbjct: 668  ------------EFINEICPESGGVSSEFFHCMFEEMTKPEYGMFMYPEMGSCMWFPAKP 715

Query: 1079 FEDQNMYFLIG 1089
              ++  YFL G
Sbjct: 716  KPEKKRYFLFG 726


>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Nomascus leucogenys]
          Length = 984

 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 168/404 (41%), Gaps = 107/404 (26%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGIGEL-KEISFTPKKITTLNGIKIIQVSCGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   +VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 138 --------YHSLALSKDSQVFSWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H   L+             CG+                           + WG+N  
Sbjct: 189 GGAHSFALSL------------CGTS--------------------------FGWGSNSA 210

Query: 183 GQMGINNSNTTV--TKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           GQ+ ++  N  V   KP  V +L NL +  I+CGA H+ VL++   +++ FG   + QL 
Sbjct: 211 GQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQD-GKVFTFGDNRSGQLG 269

Query: 241 -SPKSVHKTPQLI-------------------------------HGPWIAS----PVAMT 264
            SP    + PQL+                               HGP        P A+T
Sbjct: 270 YSPTPEKRGPQLVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFGHGPSDTGKPTHPEALT 329

Query: 265 AGED--SLVSHSG--GLVVKKIYSGGDHSIVTVTK--SSDGVLSDDFRVLNPATQILDVN 318
              D   L+S     G+ VK I++G   + VT  +  SS          ++  +Q +   
Sbjct: 330 ENFDISCLISAEDLVGVQVKHIFAGTYANFVTTHQDTSSTRAPGKTLPEISRISQSMAEK 389

Query: 319 FERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSFLQ 362
           +  +K    E E  KS+          +  +F SP C+  SFL+
Sbjct: 390 WIAVKRRSTEHEVAKSE----------IRMIFSSPACLTASFLK 423



 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 104/238 (43%), Gaps = 54/238 (22%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L     V + G ++ GQLG   A +    +P+ ++ L +++V     G  H 
Sbjct: 30  SGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGE--LPEPIQALETLNVDLVSCGKEH- 86

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      SLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q  
Sbjct: 87  -----------SLAVCHKGRVFAWGAGSEGQLGIGEL-KEISFTPKKITTLNGIKIIQVS 134

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H L L+                           +DS           ++++WG N 
Sbjct: 135 CGHYHSLALS---------------------------KDS-----------QVFSWGKNS 156

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           +GQ+G+     +   PQRV SL  +P+A +A G  HSF LS   +  + +G  SA QL
Sbjct: 157 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTS-FGWGSNSAGQL 213



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 1/95 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   FL G LCGL+++N  + N+PFPLALYKK+LD+  
Sbjct: 697 YGMFMYPEMGSCMWFPAKPKLEKKRYFLFGMLCGLSLFNLNVANLPFPLALYKKLLDQKP 756

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP + KSLQ++L+    D+ D   I F
Sbjct: 757 SLEDLKELSPRVGKSLQEVLNDDADDIGDALCIHF 791



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 20/142 (14%)

Query: 956  MDQRIQM---EHAMNQTNFYLF-----LQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQY 1007
            +D+R Q+    H M++   Y+      LQ  +    +    + V R ++V+D +R+L+Q 
Sbjct: 597  IDRRRQLFRDNHLMSEEKAYMLMHETVLQKKDEFPPSPRFILRVKRSHLVKDALRQLSQA 656

Query: 1008 TTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYE 1067
               DF K L             V+F  E   ++GGV  EF   + +E+  P+YGMF   E
Sbjct: 657  EATDFCKVL------------VVEFINEICPESGGVSSEFFHCMFEEMTKPEYGMFMYPE 704

Query: 1068 ETRSIWFSEDTFEDQNMYFLIG 1089
                +WF      ++  YFL G
Sbjct: 705  MGSCMWFPAKPKLEKKRYFLFG 726


>gi|384245911|gb|EIE19403.1| HECT-domain-containing protein [Coccomyxa subellipsoidea C-169]
          Length = 555

 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 110/200 (55%), Gaps = 18/200 (9%)

Query: 898  GGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDF-------LCNYPFIFDAKAK 950
            G RKVA++ FY   L+   D++ +Y  W   +  G+ R         LC+ PF+   +AK
Sbjct: 91   GTRKVAFSEFYNQALSESMDVQYEYVVWRRAK-EGAKRQRGPTELVSLCDVPFVLTPEAK 149

Query: 951  TTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTN 1010
              + +++  +QM H M+ +     LQ  NP +L Q+L++ + RD ++ED + ++     +
Sbjct: 150  GNIFKIEAALQMHHQMHSSGVNALLQGVNP-SLVQFLDIRIRRDRVLEDALNQVVG-RPH 207

Query: 1011 DFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETR 1070
            + KKPL+V      +++  V    EE  D GGV++EF  LL +EI +  YGMF   EETR
Sbjct: 208  ELKKPLRVT-----FISQGVD---EEGLDQGGVKKEFFQLLTREIFNEAYGMFVFNEETR 259

Query: 1071 SIWFSEDTFEDQNMYFLIGK 1090
            + WF+  + E +  + L+G+
Sbjct: 260  TYWFNATSMEAETEFTLVGQ 279



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 2/95 (2%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  + EETR+ WF+  + E +    L+G L GLAIYN  I++  FP  LY ++L    
Sbjct: 249 YGMFVFNEETRTYWFNATSMEAETEFTLVGQLMGLAIYNSVILDAHFPHCLYLELLGRRP 308

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
              DLK   P L + LQ +L++ E D+E  F   F
Sbjct: 309 TFLDLKQAMPELGRGLQQLLNF-EGDVEATFARNF 342


>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 173/381 (45%), Gaps = 61/381 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKITTLNGIKIIQVSCGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   +VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 138 --------YHSLALSKDSQVFSWGKNSHGQLGL-GKEVPSQASPQRVRSLEGIPLAQVAA 188

Query: 123 GYSHC-------------------LVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHT 163
           G +H                    L L+   V   ++K    G+  + GV      D HT
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHT 248

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            +  L   G+++T+G+N  GQ+G + +      PQ VE +  L ++ I CG+ H+     
Sbjct: 249 AV--LIQDGKVFTFGDNSSGQLGYSPTPEK-RGPQLVERIDGL-VSQIDCGSYHTLAYVH 304

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
           +  ++ +FG G +   D+ K  H  P+ + G +      + + ED +      + VK I+
Sbjct: 305 TTGQVISFGHGPS---DTSKPTH--PEALTGNFDIR--CLISAEDLV-----DVQVKHIF 352

Query: 284 SGGDHSIVTVTK--SSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           +G   + VT  +  SS          ++  +Q +   +  +K    E +  KS+      
Sbjct: 353 AGTYANFVTTHQDTSSTSAPGKTLPEISRISQSMAEKWIAVKRRSTECDVAKSE------ 406

Query: 342 LLLYLETVFLSPGCMNGSFLQ 362
               +  +F SP C+  SFL+
Sbjct: 407 ----IRMIFSSPACLTASFLK 423



 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 104/238 (43%), Gaps = 54/238 (22%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L     V + G ++ GQLG   A +    +P+ ++ L +++V     G  H 
Sbjct: 30  SGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGE--LPEPIQALETLNVDLVSCGKEH- 86

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      SLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q  
Sbjct: 87  -----------SLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKITTLNGIKIIQVS 134

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H L L+                           +DS           ++++WG N 
Sbjct: 135 CGHYHSLALS---------------------------KDS-----------QVFSWGKNS 156

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           +GQ+G+     +   PQRV SL  +P+A +A G  HSF LS   +  + +G  SA QL
Sbjct: 157 HGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTS-FGWGSNSAGQL 213



 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 1/95 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   FL G LCGL+++N  + N+PFPLALYKK+LD+  
Sbjct: 733 YGMFMYPEMGSCMWFPAKPKLEKKRYFLFGMLCGLSLFNLNVANLPFPLALYKKLLDQKP 792

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L KSLQ++L+    D+ DV  I F
Sbjct: 793 SLEDLKELSPRLGKSLQEVLNDDADDIGDVLCIRF 827



 Score = 67.8 bits (164), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 19/155 (12%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLF-----LQTFNPHTLNQYLEVEVSRD 994
            ++PFIF++ +K  LL+ D  I+M   M++   Y+      LQ  +    +    + V R 
Sbjct: 622  DFPFIFNSLSKIKLLQADSCIKM--WMSEEKAYMLRHETILQKKDEFPPSPRFILRVRRS 679

Query: 995  NIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKE 1054
             +V+D +R+L+Q    DF K L             V+F  E   ++GGV  EF   + +E
Sbjct: 680  RLVKDALRQLSQAEATDFCKVL------------VVEFIEEIRPESGGVSSEFFHCMFEE 727

Query: 1055 ILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +  P+YGMF   E    +WF      ++  YFL G
Sbjct: 728  MTKPEYGMFMYPEMGSCMWFPAKPKLEKKRYFLFG 762


>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
           gorilla gorilla]
          Length = 982

 Score =  116 bits (290), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 172/385 (44%), Gaps = 69/385 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKITTLNGIKIIQVSCGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   +VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 138 --------YHSLALSKDSQVFSWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 123 GYSHC-------------------LVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHT 163
           G +H                    L L+   V   ++K    G+  + GV      D HT
Sbjct: 189 GGTHSFALSLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHT 248

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            +  L   G+++T+G+N  GQ+G + +      PQ VE +  L ++ I CG+ H+     
Sbjct: 249 AV--LTQDGKVFTFGDNCSGQLGYSPTPEK-RGPQLVERIDGL-VSQIDCGSYHTLAYVH 304

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGED-SLVSHSGGLV---V 279
           +  ++ +FG G +   D+ K  H             P A+T   D S +  +  LV   V
Sbjct: 305 TTGQVVSFGHGPS---DTSKPTH-------------PEALTENFDISCLISAEDLVDVQV 348

Query: 280 KKIYSGGDHSIVTVTK--SSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDET 337
           K I++G   + VT  +  SS          ++  +Q +   +  +K    E E  KS+  
Sbjct: 349 KHIFAGTYANFVTTHQDTSSTHAPGKTLPEISRISQSMAEKWIAVKRRSTEHEMAKSE-- 406

Query: 338 LDQDLLLYLETVFLSPGCMNGSFLQ 362
                   +  +F SP C+  SFL+
Sbjct: 407 --------IRMIFSSPACLTASFLK 423



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 54/238 (22%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L     V + G ++ GQLG   A +    +P+ ++ L ++            
Sbjct: 30  SGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGE--LPEPIQALETL------------ 75

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           +V   + G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q  
Sbjct: 76  IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKITTLNGIKIIQVS 134

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H L L+                           +DS           ++++WG N 
Sbjct: 135 CGHYHSLALS---------------------------KDS-----------QVFSWGKNS 156

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           +GQ+G+     +   PQRV SL  +P+A +A G  HSF LS   +  + +G  SA QL
Sbjct: 157 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFALSLCGTS-FGWGSNSAGQL 213



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 1/80 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   FL G LCGL+++N  + N+PFPLALYKK+LD+  
Sbjct: 695 YGMFMYPEMGSCMWFPAKPKPEKKRYFLFGMLCGLSLFNLNVANLPFPLALYKKLLDQKP 754

Query: 779 LLQDLKDLSPTLAKSLQDIL 798
            L+DLK+LSP L KSLQ++L
Sbjct: 755 SLEDLKELSPRLGKSLQEVL 774



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 15/153 (9%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYL---FLQTFNPHTLNQYLEVEVSRDNI 996
            ++PFIF++ +K  LL+ D  I+M+ + N+    +    LQ  +    +    ++V R ++
Sbjct: 584  DFPFIFNSLSKIKLLQADSHIKMQMSENKAYMLMHETILQKKDEFPPSPRFILKVRRSHL 643

Query: 997  VEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEIL 1056
            V+D +R+L+Q    DF K L V            +F  E   ++GGV  EF   + +E+ 
Sbjct: 644  VKDALRQLSQAEATDFCKVLVV------------EFINEICPESGGVSSEFFHCMFEEMT 691

Query: 1057 DPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             P+YGMF   E    +WF      ++  YFL G
Sbjct: 692  KPEYGMFMYPEMGSCMWFPAKPKPEKKRYFLFG 724


>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 172/381 (45%), Gaps = 61/381 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKITTLNGIKIIQVSCGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   +VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 138 --------YHSLALSKDSQVFSWGKNSHGQLGL-GKEVPSQASPQRVRSLEGIPLAQVAA 188

Query: 123 GYSHC-------------------LVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHT 163
           G +H                    L L+   V   ++K    G+  + GV      D HT
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHT 248

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            +  L   G+++T+G+N  GQ+G + +      PQ VE +  L ++ I CG+ H+     
Sbjct: 249 AV--LIQDGKVFTFGDNSSGQLGYSPTPEK-RGPQLVERIDGL-VSQIDCGSYHTLAYVH 304

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
           +  ++ +FG G +   D  K  H  P+ + G +      + + ED +      + VK I+
Sbjct: 305 TTGQVISFGHGPS---DKSKPTH--PEALTGNFDIR--CLISAEDLV-----DVQVKHIF 352

Query: 284 SGGDHSIVTVTK--SSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           +G   + VT  +  SS          ++  +Q +   +  +K    E +  KS+      
Sbjct: 353 AGTYANFVTTHQDTSSTSAPGKTLPEISRISQSMAEKWIAVKRRSTECDVAKSE------ 406

Query: 342 LLLYLETVFLSPGCMNGSFLQ 362
               +  +F SP C+  SFL+
Sbjct: 407 ----IRMIFSSPACLTASFLK 423



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 149/340 (43%), Gaps = 37/340 (10%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L     V + G ++ GQLG   A +    +P+ ++ L +++V     G    
Sbjct: 30  SGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRG--ELPEPIQALETLNVDLVSCGKE-- 85

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                     HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q  
Sbjct: 86  ----------HSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKITTLNGIKIIQVS 134

Query: 122 AGYSHCLVLTSSGVV----TCTHKENGCGSD-PSQ----------GVQSNLVQDSHTTIT 166
            G+ H L L+    V      +H + G G + PSQ          G+    V        
Sbjct: 135 CGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSF 194

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTV--TKPQRVESLVNLPIALIACGANHSFVLSKS 224
           +L+  G  + WG+N  GQ+ ++  N  V   KP  + +L NL +  I+CG  H+ VL + 
Sbjct: 195 ALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQD 254

Query: 225 VSRLYAFGIGSAVQLD-SPKSVHKTPQLIHG-PWIASPVAMTAGEDSLVSHSGGLVVKKI 282
             +++ FG  S+ QL  SP    + PQL+     + S +   +       H+ G V+   
Sbjct: 255 -GKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313

Query: 283 YSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERL 322
           +   D S  T  ++  G    D R L  A  ++DV  + +
Sbjct: 314 HGPSDKSKPTHPEALTGNF--DIRCLISAEDLVDVQVKHI 351



 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 1/95 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   FL G LCGL+++N  + N+PFPLALYKK+LD+  
Sbjct: 733 YGMFMYPEMGSCMWFPAKPKLEKKRYFLFGMLCGLSLFNLNVANLPFPLALYKKLLDQKP 792

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L KSLQ++L+    D+ DV  I F
Sbjct: 793 SLEDLKELSPRLGKSLQEVLNDDADDIGDVLCIRF 827



 Score = 67.8 bits (164), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 19/155 (12%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLF-----LQTFNPHTLNQYLEVEVSRD 994
            ++PFIF++ +K  LL+ D  I+M   M++   Y+      LQ  +    +    + V R 
Sbjct: 622  DFPFIFNSLSKIKLLQADSCIKM--WMSEEKAYMLRHETILQKKDEFPPSPRFILRVRRS 679

Query: 995  NIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKE 1054
             +V+D +R+L+Q    DF K L             V+F  E   ++GGV  EF   + +E
Sbjct: 680  RLVKDALRQLSQAEATDFCKVL------------VVEFIEEIRPESGGVSSEFFHCMFEE 727

Query: 1055 ILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +  P+YGMF   E    +WF      ++  YFL G
Sbjct: 728  MTKPEYGMFMYPEMGSCMWFPAKPKLEKKRYFLFG 762


>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
          Length = 1020

 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 172/381 (45%), Gaps = 61/381 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKITTLNGIKIIQVSCGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   +VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 138 --------YHSLALSKDSQVFSWGKNSHGQLGL-GKEVPSQASPQRVRSLEGIPLAQVAA 188

Query: 123 GYSHC-------------------LVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHT 163
           G +H                    L L+   V   ++K    G+  + GV      D HT
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHT 248

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            +  L   G+++T+G+N  GQ+G + +      PQ VE +  L ++ I CG+ H+     
Sbjct: 249 AV--LIQDGKVFTFGDNSSGQLGYSPTPEK-RGPQLVERIDGL-VSQIDCGSYHTLAYVH 304

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
           +  ++ +FG G +   D  K  H  P+ + G +      + + ED +      + VK I+
Sbjct: 305 TTGQVISFGHGPS---DKSKPTH--PEALTGNFDIR--CLISAEDLV-----DVQVKHIF 352

Query: 284 SGGDHSIVTVTK--SSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQD 341
           +G   + VT  +  SS          ++  +Q +   +  +K    E +  KS+      
Sbjct: 353 AGTYANFVTTHQDTSSTSAPGKTLPEISRISQSMAEKWIAVKRRSTECDVAKSE------ 406

Query: 342 LLLYLETVFLSPGCMNGSFLQ 362
               +  +F SP C+  SFL+
Sbjct: 407 ----IRMIFSSPACLTASFLK 423



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 149/340 (43%), Gaps = 37/340 (10%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L     V + G ++ GQLG   A +    +P+ ++ L +++V     G    
Sbjct: 30  SGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRG--ELPEPIQALETLNVDLVSCGKE-- 85

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                     HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q  
Sbjct: 86  ----------HSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKITTLNGIKIIQVS 134

Query: 122 AGYSHCLVLTSSGVV----TCTHKENGCGSD-PSQ----------GVQSNLVQDSHTTIT 166
            G+ H L L+    V      +H + G G + PSQ          G+    V        
Sbjct: 135 CGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSF 194

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTV--TKPQRVESLVNLPIALIACGANHSFVLSKS 224
           +L+  G  + WG+N  GQ+ ++  N  V   KP  + +L NL +  I+CG  H+ VL + 
Sbjct: 195 ALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQD 254

Query: 225 VSRLYAFGIGSAVQLD-SPKSVHKTPQLIHG-PWIASPVAMTAGEDSLVSHSGGLVVKKI 282
             +++ FG  S+ QL  SP    + PQL+     + S +   +       H+ G V+   
Sbjct: 255 -GKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313

Query: 283 YSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERL 322
           +   D S  T  ++  G    D R L  A  ++DV  + +
Sbjct: 314 HGPSDKSKPTHPEALTGNF--DIRCLISAEDLVDVQVKHI 351



 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 1/95 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   FL G LCGL+++N  + N+PFPLALYKK+LD+  
Sbjct: 733 YGMFMYPEMGSCMWFPAKPKLEKKRYFLFGMLCGLSLFNLNVANLPFPLALYKKLLDQKP 792

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L KSLQ++L+    D+ DV  I F
Sbjct: 793 SLEDLKELSPRLGKSLQEVLNDDADDIGDVLCIRF 827



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 19/155 (12%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLF-----LQTFNPHTLNQYLEVEVSRD 994
            ++PFIF++ +K  LL+ D  I+M   M++   Y+      LQ  +    +    + V R 
Sbjct: 622  DFPFIFNSLSKIKLLQADSCIKM--WMSEEKAYMLRHETILQKKDEFPPSPRFILRVRRS 679

Query: 995  NIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKE 1054
             +V+D +R+L+Q    DF K L             V+F  E   ++GGV  EF   + +E
Sbjct: 680  RLVKDALRQLSQAEATDFCKVL------------VVEFIEEIRPESGGVSSEFFHCMFEE 727

Query: 1055 ILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +  P+YGMF   E    +WF      ++  YFL G
Sbjct: 728  MTKPEYGMFMYPEMGSCMWFPAKPKLEKKRYFLFG 762


>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
           familiaris]
          Length = 1015

 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 182/413 (44%), Gaps = 73/413 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG     K++  IP ++K L  + + Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGT-GEFKETNLIPMKIKTLNDIKIKQVSCGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL++ G+VF+WG ++ GQLGL      SQ+ P+RV+ L  + + Q  A
Sbjct: 138 --------YHSLALSEGGQVFSWGSNSDGQLGL-GKKFPSQASPQRVRSLDGIPLAQVAA 188

Query: 123 GYSHCLVLTSSGVV----------TCTHKENGCGSD---------PSQGVQSNLVQDSHT 163
           G +H   L+ SG               HK N  G            + GV        HT
Sbjct: 189 GGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHT 248

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            + + N  G+++T+G+N YGQ+G ++     + PQ VE +  L ++ I CG+ H+     
Sbjct: 249 VVLTQN--GKVFTFGDNTYGQLG-HSPTAEKSGPQLVEGIDGL-VSQIDCGSYHTLA--- 301

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTA--GEDSLVSHSGGLVVKK 281
                Y +  G  V      +   +P   H   +   V  T     D LV       VK 
Sbjct: 302 -----YVYTTGKVVSFGREPTCKSSP--THPEALTENVDFTCLISADDLVD----FQVKH 350

Query: 282 IYSGGDHSIVTVTKSSDGVLSDDFRVLNPA-TQILDVNFERLKECER--EVEQLKSDETL 338
           I++G   + VT  +++    +D  R + P  +QI +   E+    ++  E E  KS+   
Sbjct: 351 IFAGTYANFVTTYQNTSS--TDVPRKILPGISQINESLTEKWIAAKKRTECEVAKSE--- 405

Query: 339 DQDLLLYLETVFLSPGCMNGSFLQV-ENDEHFSCN----SKKFSFIKLSLINW 386
                  +  +F SP C+  SFL+  E+ E  S +      + +F KL+   W
Sbjct: 406 -------IAMIFSSPACLTASFLKKRESAETTSIDVDLKKARDTFKKLTETQW 451



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 125/271 (46%), Gaps = 34/271 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L   G+V + G +  GQLG   A   +Q   KR++ L ++ V     G    
Sbjct: 30  SGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQL--KRIRALETLHVDLVSCGKE-- 85

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                     HSLA+   G VF WG  + GQLG     K++  IP ++K L  + + Q  
Sbjct: 86  ----------HSLAVCHKGRVFAWGAGSEGQLGT-GEFKETNLIPMKIKTLNDIKIKQVS 134

Query: 122 AGYSHCLVLTSSGVV----TCTHKENGCGSD-PSQ----------GVQSNLVQDSHTTIT 166
            G+ H L L+  G V    + +  + G G   PSQ          G+    V        
Sbjct: 135 CGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSF 194

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVT--KPQRVESLVNLPIALIACGANHSFVLSKS 224
           +L+  G  + WG N  GQ+ ++ +N +    KP  + +L NL +  I+CG  H+ VL+++
Sbjct: 195 ALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQN 254

Query: 225 VSRLYAFGIGSAVQL-DSPKSVHKTPQLIHG 254
             +++ FG  +  QL  SP +    PQL+ G
Sbjct: 255 -GKVFTFGDNTYGQLGHSPTAEKSGPQLVEG 284



 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 1/91 (1%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y EE   +WF   +   +   FL G LCGL++YN    N+PFPLAL+KK+LD+  
Sbjct: 725 YGMFMYPEEGSYMWFPAKSKFKKKRYFLFGILCGLSLYNLNPANLPFPLALFKKLLDQKP 784

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVF 809
             QDLK+LSP L K+LQ+ILD    D E+++
Sbjct: 785 SFQDLKELSPLLGKNLQEILDNEADDTEELY 815



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 14/150 (9%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVED 999
            ++PFIF   +K  LL+ +  +++   M+    YL      P+       + V R ++VED
Sbjct: 619  DFPFIFTLLSKIQLLQAESHLKI--LMSVKKEYLPWGQVIPYNELHPFTLRVRRRHLVED 676

Query: 1000 TIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPK 1059
             +R+L+Q    D  K            A  V+F  E      GV+ EF   + +E+ + +
Sbjct: 677  ALRQLSQAEDTDLHK------------AFMVEFIKEIRSIGYGVKSEFFYSIFEEMTNIE 724

Query: 1060 YGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            YGMF   EE   +WF   +   +  YFL G
Sbjct: 725  YGMFMYPEEGSYMWFPAKSKFKKKRYFLFG 754


>gi|6630609|dbj|BAA88519.1| cyclin-E binding protein 1 [Homo sapiens]
          Length = 1024

 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 159/366 (43%), Gaps = 86/366 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG + HGQLG+      S + P+ V+ LA V + Q  AG +   
Sbjct: 146 GDYHSLALSKGGELFAWGQNLHGQLGV-GRKFPSTTTPQIVEHLAGVPLAQISAGEA--- 201

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL+  G +++WG +  GQLGL   + K    P  ++GL +  V     
Sbjct: 202 ---------HSMALSMSGNIYSWGKNECGQLGLGHTESKDD--PSLIEGLDNQKVEFVAC 250

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH  +LT  G+                                      L+T+G  ++
Sbjct: 251 GGSHSALLTQDGL--------------------------------------LFTFGAGKH 272

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS     +P  V  LV   +  IACG  H+      + ++++FG G   QL + 
Sbjct: 273 GQLG-HNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 331

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGED-SLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV- 300
            +  +   L        PV +++ E+  L SH+    +  I +GG+ SI+   K  +   
Sbjct: 332 GTRDQLMPL--------PVKVSSSEELKLESHTSEKELIMI-AGGNQSILLWIKKENSYV 382

Query: 301 -LSDDFRVLNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCM 356
            L      LN  T    I DV  +R +  +RE+++                 +F SP C+
Sbjct: 383 NLKRTIPTLNEGTVKRWIADVETKRWQSTKREIQE-----------------IFSSPACL 425

Query: 357 NGSFLQ 362
            GSFL+
Sbjct: 426 TGSFLR 431



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 1/95 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   F  G LCGL+++N  + N+PFPLAL+KK+LD+  
Sbjct: 742 YGMFMYPEGASCMWFPVKPKFEKKRYFFFGVLCGLSLFNCNVANLPFPLALFKKLLDQMP 801

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L K+LQ +LD    + E+VF I F
Sbjct: 802 SLEDLKELSPDLGKNLQTLLDDEGDNFEEVFYIHF 836



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 117/290 (40%), Gaps = 42/290 (14%)

Query: 805  LEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQ 864
            + D   +    ++  + +  F +L+ +FK  +I  L         NG++         L+
Sbjct: 519  MSDQSSLVLEEYWATLQESTFSKLVQMFKTAVICQLDYWDESAEENGNV------QALLE 572

Query: 865  VLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFR 924
            +L+KL+ +N                 ++   P    +V      +     VC  R  +  
Sbjct: 573  MLKKLHRVNQ----------------VKCQLPESIFQVDELLHRLNFFVEVCR-RYLWKM 615

Query: 925  WISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLN 984
             +    N        ++PFIF+  +K  LL  D  +++E   ++   YL          +
Sbjct: 616  TVDASENVQCCVIFSHFPFIFNNLSKIKLLHTDTLLKIESKKHKA--YLRSAAIEEERES 673

Query: 985  QY-----LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAED 1039
            ++      ++ V R++++ED + +L+Q+   D +K L             V F GE   D
Sbjct: 674  EFALRPTFDLTVRRNHLIEDVLNQLSQFENEDLRKEL------------WVSFSGEIGYD 721

Query: 1040 AGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             GGV++EF   L  E++ P+YGMF   E    +WF      ++  YF  G
Sbjct: 722  LGGVKKEFFYCLFAEMIQPEYGMFMYPEGASCMWFPVKPKFEKKRYFFFG 771


>gi|187954501|gb|AAI40717.1| Hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 159/366 (43%), Gaps = 86/366 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG + HGQLG+      S + P+ V+ LA V + Q  AG +   
Sbjct: 146 GDYHSLALSKGGELFAWGQNLHGQLGV-GRKFPSTTTPQIVEHLAGVPLAQISAGEA--- 201

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL+  G +++WG +  GQLGL   + K    P  ++GL +  V     
Sbjct: 202 ---------HSMALSMSGNIYSWGKNECGQLGLGHTESKDD--PSLIEGLDNQKVEFVAC 250

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH  +LT  G+                                      L+T+G  ++
Sbjct: 251 GGSHSALLTQDGL--------------------------------------LFTFGAGKH 272

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS     +P  V  LV   +  IACG  H+      + ++++FG G   QL + 
Sbjct: 273 GQLG-HNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 331

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGED-SLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV- 300
            +  +   L        PV +++ E+  L SH+    +  I +GG+ SI+   K  +   
Sbjct: 332 GTRDQLMPL--------PVKVSSSEELKLESHTSEKELIMI-AGGNQSILLWIKKENSYV 382

Query: 301 -LSDDFRVLNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCM 356
            L      LN  T    I DV  +R +  +RE+++                 +F SP C+
Sbjct: 383 NLKRTIPTLNEGTVKRWIADVETKRWQSTKREIQE-----------------IFSSPACL 425

Query: 357 NGSFLQ 362
            GSFL+
Sbjct: 426 TGSFLR 431



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 1/95 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   F  G LCGL+++N  + N+PFPLAL+KK+LD+  
Sbjct: 742 YGMFMYPEGASCMWFPVKPKFEKKRYFFFGVLCGLSLFNCNVANLPFPLALFKKLLDQMP 801

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L K+LQ +LD    + E+VF I F
Sbjct: 802 SLEDLKELSPDLGKNLQTLLDDEGDNFEEVFYIHF 836



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 117/290 (40%), Gaps = 42/290 (14%)

Query: 805  LEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQ 864
            + D   +    ++  + +  F +L+ +FK  +I  L         NG++         L+
Sbjct: 519  MSDQSSLVLEEYWATLQESTFSKLVQMFKTAVICQLDYWDESAEENGNV------QALLE 572

Query: 865  VLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFR 924
            +L+KL+ +N                 ++   P    +V      +     VC  R  +  
Sbjct: 573  MLKKLHRVNQ----------------VKCQLPESIFQVDELLHRLNFFVEVCR-RYLWKM 615

Query: 925  WISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLN 984
             +    N        ++PFIF+  +K  LL  D  +++E   ++   YL          +
Sbjct: 616  TVDASENVQCCVIFSHFPFIFNNLSKIKLLHTDTLLKIESKKHKA--YLRSAAIEEERES 673

Query: 985  QY-----LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAED 1039
            ++      ++ V R++++ED + +L+Q+   D +K L             V F GE   D
Sbjct: 674  EFALRPTFDLTVRRNHLIEDVLNQLSQFENEDLRKEL------------WVSFSGEIGYD 721

Query: 1040 AGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             GGV++EF   L  E++ P+YGMF   E    +WF      ++  YF  G
Sbjct: 722  LGGVKKEFFYCLFAEMIQPEYGMFMYPEGASCMWFPVKPKFEKKRYFFFG 771


>gi|110825982|ref|NP_057407.2| E3 ISG15--protein ligase HERC5 [Homo sapiens]
 gi|296434523|sp|Q9UII4.2|HERC5_HUMAN RecName: Full=E3 ISG15--protein ligase HERC5; AltName:
           Full=Cyclin-E-binding protein 1; AltName: Full=HECT
           domain and RCC1-like domain-containing protein 5
 gi|119626425|gb|EAX06020.1| hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 159/366 (43%), Gaps = 86/366 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG + HGQLG+      S + P+ V+ LA V + Q  AG +   
Sbjct: 146 GDYHSLALSKGGELFAWGQNLHGQLGV-GRKFPSTTTPQIVEHLAGVPLAQISAGEA--- 201

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL+  G +++WG +  GQLGL   + K    P  ++GL +  V     
Sbjct: 202 ---------HSMALSMSGNIYSWGKNECGQLGLGHTESKDD--PSLIEGLDNQKVEFVAC 250

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH  +LT  G+                                      L+T+G  ++
Sbjct: 251 GGSHSALLTQDGL--------------------------------------LFTFGAGKH 272

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS     +P  V  LV   +  IACG  H+      + ++++FG G   QL + 
Sbjct: 273 GQLG-HNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 331

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGED-SLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV- 300
            +  +   L        PV +++ E+  L SH+    +  I +GG+ SI+   K  +   
Sbjct: 332 GTRDQLMPL--------PVKVSSSEELKLESHTSEKELIMI-AGGNQSILLWIKKENSYV 382

Query: 301 -LSDDFRVLNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCM 356
            L      LN  T    I DV  +R +  +RE+++                 +F SP C+
Sbjct: 383 NLKRTIPTLNEGTVKRWIADVETKRWQSTKREIQE-----------------IFSSPACL 425

Query: 357 NGSFLQ 362
            GSFL+
Sbjct: 426 TGSFLR 431



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 1/95 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   F  G LCGL+++N  + N+PFPLAL+KK+LD+  
Sbjct: 742 YGMFMYPEGASCMWFPVKPKFEKKRYFFFGVLCGLSLFNCNVANLPFPLALFKKLLDQMP 801

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L K+LQ +LD    + E+VF I F
Sbjct: 802 SLEDLKELSPDLGKNLQTLLDDEGDNFEEVFYIHF 836



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 117/290 (40%), Gaps = 42/290 (14%)

Query: 805  LEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQ 864
            + D   +    ++  + +  F +L+ +FK  +I  L         NG++         L+
Sbjct: 519  MSDQSSLVLEEYWATLQESTFSKLVQMFKTAVICQLDYWDESAEENGNV------QALLE 572

Query: 865  VLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFR 924
            +L+KL+ +N                 ++   P    +V      +     VC  R  +  
Sbjct: 573  MLKKLHRVNQ----------------VKCQLPESIFQVDELLHRLNFFVEVCR-RYLWKM 615

Query: 925  WISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLN 984
             +    N        ++PFIF+  +K  LL  D  +++E   ++   YL          +
Sbjct: 616  TVDASENVQCCVIFSHFPFIFNNLSKIKLLHTDTLLKIESKKHKA--YLRSAAIEEERES 673

Query: 985  QY-----LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAED 1039
            ++      ++ V R++++ED + +L+Q+   D +K L             V F GE   D
Sbjct: 674  EFALRPTFDLTVRRNHLIEDVLNQLSQFENEDLRKEL------------WVSFSGEIGYD 721

Query: 1040 AGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             GGV++EF   L  E++ P+YGMF   E    +WF      ++  YF  G
Sbjct: 722  LGGVKKEFFYCLFAEMIQPEYGMFMYPEGASCMWFPVKPKFEKKRYFFFG 771


>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
          Length = 1028

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 173/391 (44%), Gaps = 75/391 (19%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIMTLNDIKIIQVSCGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   +VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 138 --------YHSLALSKDSQVFSWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 123 GYSHC-------------------LVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHT 163
           G +H                    L L+   V   ++K    G+  + GV      D+HT
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHT 248

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            +  L   G+++T+G+N  GQ+G + +      PQ VE +  L ++ I CG+ H+     
Sbjct: 249 AV--LTQDGKVFTFGDNRSGQLGYSPTPEK-RGPQLVERIDGL-VSQIDCGSYHTLAYVH 304

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSG--GLVV 279
           +  ++ +FG G +   D+ K  H             P A+T   D   L+S      + V
Sbjct: 305 TTGQVVSFGHGPS---DTSKPTH-------------PEALTENFDISCLISAEDFVDVQV 348

Query: 280 KKIYSGGDHSIVTVTKSS-------DGVLSDDFRV-LNPATQILDVNFERLKECEREVEQ 331
           K I++G   + VT  + S              F+  ++  +Q +   +  +K    E E 
Sbjct: 349 KHIFAGTYANFVTTHQVSIILFVPLKNYFFSRFQTEISRISQSMAEKWIAVKRRSTEHEM 408

Query: 332 LKSDETLDQDLLLYLETVFLSPGCMNGSFLQ 362
            KS+          +  +F SP C+  SFL+
Sbjct: 409 AKSE----------IRMIFSSPACLTASFLK 429



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 124/269 (46%), Gaps = 34/269 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L     V + G ++ GQLG   A +    +P+ ++ L ++            
Sbjct: 30  SGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRG--ELPEPIQALETL------------ 75

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           +V   + G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q  
Sbjct: 76  IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIMTLNDIKIIQVS 134

Query: 122 AGYSHCLVLTSSGVV----TCTHKENGCGSD-PSQ----------GVQSNLVQDSHTTIT 166
            G+ H L L+    V      +H + G G + PSQ          G+    V        
Sbjct: 135 CGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSF 194

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTV--TKPQRVESLVNLPIALIACGANHSFVLSKS 224
           +L+  G  + WG+N  GQ+ ++  N  V   KP  V +L NL +  I+CG  H+ VL++ 
Sbjct: 195 ALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQD 254

Query: 225 VSRLYAFGIGSAVQLD-SPKSVHKTPQLI 252
             +++ FG   + QL  SP    + PQL+
Sbjct: 255 -GKVFTFGDNRSGQLGYSPTPEKRGPQLV 282



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 1/80 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   FL G LCGL+++N  + N+PFPLALYKK+LD+  
Sbjct: 739 YGMFMYPEMGSCMWFPAKPKPEKKRYFLFGMLCGLSLFNLNVANLPFPLALYKKLLDQKP 798

Query: 779 LLQDLKDLSPTLAKSLQDIL 798
            L+DLK+LSP L KSLQ++L
Sbjct: 799 SLEDLKELSPRLGKSLQEVL 818



 Score = 72.4 bits (176), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 19/155 (12%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLF-----LQTFNPHTLNQYLEVEVSRD 994
            ++PFIF++ +K  LL+ D  I+M+  M++   Y+      LQ  +    +    + V R 
Sbjct: 628  DFPFIFNSLSKIKLLQADSHIKMQ--MSEKKAYMLMHETILQKKDEFPPSPRFILRVRRS 685

Query: 995  NIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKE 1054
             +V+D +R+L+Q    DF K L V            +F  E   ++GGV  EF   + +E
Sbjct: 686  RLVKDALRQLSQAEATDFCKVLVV------------EFINEICPESGGVSSEFFHCMFEE 733

Query: 1055 ILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +  P+YGMF   E    +WF      ++  YFL G
Sbjct: 734  MTKPEYGMFMYPEMGSCMWFPAKPKPEKKRYFLFG 768


>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Felis catus]
          Length = 1143

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 164/394 (41%), Gaps = 89/394 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG + HGQLG+ S    S +IP+ V+ L+ + +VQ  AG +   
Sbjct: 264 GDYHSLALSKGGELFAWGQNLHGQLGIGS-QFASIAIPQIVENLSGIPLVQISAGKA--- 319

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL+  G +++WG +  GQLGL   D K    P  ++ L +  V     
Sbjct: 320 ---------HSMALSMSGNIYSWGRNDFGQLGLGHTDGK--DFPSLIEALDNQKVEFLAC 368

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH  +LT  G+V                                      +T+G  ++
Sbjct: 369 GGSHTALLTKDGLV--------------------------------------FTFGAGKH 390

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS     +P+ V  L    +  IACG  H+      + ++++FG G   QL + 
Sbjct: 391 GQLG-HNSTQNELRPRLVTELAGNRVTQIACGRQHTLAYVSDLGKVFSFGSGKEGQLGNG 449

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV--TVTKSSDGV 300
            +        H   I  P+ + + E+             + +GG+ SI+     K+S   
Sbjct: 450 GT--------HNQLIPLPMKLPSNEELTFESRASEKELIMIAGGNQSILLWMGKKNSYVN 501

Query: 301 LSDDFRVLNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMN 357
           L      LN  T    I DV  ++ +  ++E+ +                 +F SP C+ 
Sbjct: 502 LRRKIPTLNEGTVKRWIADVGTKQWQNTKKEIRE-----------------IFSSPACLT 544

Query: 358 GSFLQVENDE-----HFSCNSKKFSFIKLSLINW 386
           GSF +          H   N  + +F +L+  +W
Sbjct: 545 GSFSRERRAAETMPVHLDLNKARNAFKELTQKDW 578



 Score = 87.4 bits (215), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 1/95 (1%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y EE   +WF      ++   F  G LCGL+++N+ + N+PFPLAL+KK+L++  
Sbjct: 861 YGMFTYPEEASYMWFPVRPKFEKKRYFFFGVLCGLSLFNFNVANIPFPLALFKKLLNQAP 920

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L KSLQ +LD    D  +VF I F
Sbjct: 921 SLEDLKELSPVLGKSLQTLLDDEGDDFGEVFYIYF 955



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 99/255 (38%), Gaps = 81/255 (31%)

Query: 907  FYMPDLATVCDIRIDYFRWISGRPNG--STRD-----FLCNYPFIFDAKAKTTLLEMDQR 959
            F + +L    D   D +R  S R N   ++ D        ++PFIF+  +K  LL  D  
Sbjct: 710  FKINELTQWLDFYGDAYRRSSWRVNNLDTSVDTPYPVIFSHFPFIFNILSKIKLLYADSL 769

Query: 960  IQMEHAMNQTNFYL------------FLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQY 1007
            ++++    +    L             L TFN         + V R++++ED +  L Q+
Sbjct: 770  LKIQEKKFRACMRLAGVVEHGRSELSLLPTFN---------LTVRRNHLIEDVLSHLNQF 820

Query: 1008 TTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYE 1067
               D ++ L             V F GE   D+GGV+ EF   L +E+  P+YGMF   E
Sbjct: 821  ENEDLRREL------------MVSFSGEIGHDSGGVKVEFFHCLFEEMTRPEYGMFTYPE 868

Query: 1068 ETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEYEETRSIWFSEDTFEDQNMYF 1127
            E   +WF                            +  ++E+ R              YF
Sbjct: 869  EASYMWF---------------------------PVRPKFEKKR--------------YF 887

Query: 1128 LIGTLCGLAIYNYTV 1142
              G LCGL+++N+ V
Sbjct: 888  FFGVLCGLSLFNFNV 902


>gi|402869932|ref|XP_003898997.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Papio anubis]
          Length = 1023

 Score =  114 bits (285), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 169/399 (42%), Gaps = 91/399 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG + HGQLG+      S + P+ V+ LA V + Q  AG +   
Sbjct: 145 GDYHSLALSKGGELFAWGQNLHGQLGV-GRKFPSTTTPQIVEHLAGVPLAQISAGEA--- 200

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL+  G V++WG +  GQLGL     +S+  P  ++ L +  V     
Sbjct: 201 ---------HSMALSMSGNVYSWGKNEFGQLGL--GHTESKDSPSLIEALDNQKVEFLAC 249

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH  +LT  G+                                      L+T+G  ++
Sbjct: 250 GGSHSALLTQDGL--------------------------------------LFTFGAGKH 271

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS     +P  V  LV   +  IACG  H+      + ++++FG G   QL + 
Sbjct: 272 GQLG-HNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 330

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGED-SLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV- 300
            ++ +         I  PV +++ E+  L SH+    +  I +GG+ SI+   K  +   
Sbjct: 331 GTLDQL--------IPLPVKVSSSEELKLESHTSEKELIMI-AGGNQSILLWIKKENSYV 381

Query: 301 -LSDDFRVLNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCM 356
            L      LN  T    I DV  +R    +RE+++                 +F SP C+
Sbjct: 382 NLKRTIPTLNEGTVKRWIADVETKRWHSTKREIQE-----------------IFSSPACL 424

Query: 357 NGSFLQVENDE-----HFSCNSKKFSFIKLSLINWFMKL 390
            GSFL+          +   N  +  F +L+  +W   +
Sbjct: 425 TGSFLRKRRTAEMMPVYLDLNKARNIFKELTQKDWITNM 463



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 1/95 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   F  G LCGL+++N  + N+PFPLAL+KK+LD+  
Sbjct: 741 YGMFMYPEGASCMWFPVRPXIEKKRYFFFGLLCGLSLFNCNVANLPFPLALFKKLLDQMP 800

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L K+LQ +LD    + E+VF I F
Sbjct: 801 SLEDLKELSPDLGKNLQTLLDDEGDNFEEVFYIHF 835



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/290 (21%), Positives = 118/290 (40%), Gaps = 42/290 (14%)

Query: 805  LEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQ 864
            + D   +    ++  + +  F +L+ +FK  ++  L         NG++         L+
Sbjct: 518  MSDPSSLVLEEYWATLQESTFSKLVQMFKTAVVCQLDYWDESAEENGNV------QALLE 571

Query: 865  VLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFR 924
            +L+KL+ +N                 ++   P    +V    + +     VC  R  +  
Sbjct: 572  MLKKLHRVNQ----------------MKCQLPESIFQVDELLYRLNFFVEVCR-RCLWKM 614

Query: 925  WISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLN 984
             +    N        ++PFIF+  +K  LL  D  +++E   ++   YL          +
Sbjct: 615  TVDTSENAGCWVIFSHFPFIFNHLSKIKLLHTDTLLKIEGKKHKA--YLMSAAIEEERES 672

Query: 985  QY-----LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAED 1039
            ++      ++ V R++++ED + +L+Q+   D +K L             V F GE   D
Sbjct: 673  EFALMPTFDLTVRRNHLIEDVLNQLSQFENEDLRKEL------------WVSFSGEIGYD 720

Query: 1040 AGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              GV+REF   L +E++ P+YGMF   E    +WF      ++  YF  G
Sbjct: 721  LVGVKREFFYCLFEEMIQPEYGMFMYPEGASCMWFPVRPXIEKKRYFFFG 770



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 8/154 (5%)

Query: 106 PKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQ----DS 161
           PK +K   ++ +     G  H L+L+S G               S   +  ++Q    D 
Sbjct: 88  PKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEYDYSMKHLRSESILQEKKIIQITCGDY 147

Query: 162 HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
           H+   +L+  GEL+ WG N +GQ+G+     + T PQ VE L  +P+A I+ G  HS  L
Sbjct: 148 HSL--ALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMAL 205

Query: 222 SKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
           S S   +Y++G     QL    +  K +P LI  
Sbjct: 206 SMS-GNVYSWGKNEFGQLGLGHTESKDSPSLIEA 238


>gi|37695550|gb|AAR00320.1| HECT E3 ubiquitin ligase [Homo sapiens]
          Length = 1024

 Score =  113 bits (283), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 158/366 (43%), Gaps = 86/366 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG + HGQLG+      S + P+ V+ LA V + Q  AG +   
Sbjct: 146 GDYHSLALSKGGELFAWGQNLHGQLGV-GRKFPSTTTPQIVEHLAGVPLAQISAGEA--- 201

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS AL+  G +++WG +  GQLGL   + K    P  ++GL +  V     
Sbjct: 202 ---------HSTALSMSGNIYSWGKNECGQLGLGHTESKDD--PSLIEGLDNQKVEFVAC 250

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH  +LT  G+                                      L+T+G  ++
Sbjct: 251 GGSHSALLTQDGL--------------------------------------LFTFGAGKH 272

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS     +P  V  LV   +  IACG  H+      + ++++FG G   QL + 
Sbjct: 273 GQLG-HNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 331

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGED-SLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV- 300
            +  +   L        PV +++ E+  L SH+    +  I +GG+ SI+   K  +   
Sbjct: 332 GTRDQLMPL--------PVKVSSSEELKLESHTSEKELIMI-AGGNQSILLWIKKENSYV 382

Query: 301 -LSDDFRVLNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCM 356
            L      LN  T    I DV  +R +  +RE++++ S                 SP C+
Sbjct: 383 NLKRTIPTLNEGTVKRWIADVETKRWQSTKREIQEISS-----------------SPACL 425

Query: 357 NGSFLQ 362
            GSFL+
Sbjct: 426 TGSFLR 431



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 1/95 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   F  G LCGL+++N  + N+PFPLAL+KK+LD+  
Sbjct: 742 YGMFMYPEGASCMWFPVKPKFEKKRYFFFGVLCGLSLFNCNVANLPFPLALFKKLLDQMP 801

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L K+LQ +LD    + E+VF I F
Sbjct: 802 SLEDLKELSPDLGKNLQTLLDDEGDNFEEVFYIHF 836



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 117/290 (40%), Gaps = 42/290 (14%)

Query: 805  LEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQ 864
            + D   +    ++  + +  F +L+ +FK  +I  L         NG++         L+
Sbjct: 519  MSDQSSLVLEEYWATLQESTFSKLVQMFKTAVICQLDYWDESAEENGNV------QALLE 572

Query: 865  VLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFR 924
            +L+KL+ +N                 ++   P    +V      +     VC  R  +  
Sbjct: 573  MLKKLHRVNQ----------------VKCQLPESIFQVDELLHRLNFFVEVCR-RYLWKM 615

Query: 925  WISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLN 984
             +    N        ++PFIF+  +K  LL  D  +++E   ++   YL          +
Sbjct: 616  TVDASENVQCCVIFSHFPFIFNNLSKIKLLHTDTLLKIESKKHKA--YLRSAAIEEERES 673

Query: 985  QY-----LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAED 1039
            ++      ++ V R++++ED + +L+Q+   D +K L             V F GE   D
Sbjct: 674  EFALRPTFDLTVRRNHLIEDVLNQLSQFENEDLRKEL------------WVSFSGEIGYD 721

Query: 1040 AGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             GGV++EF   L  E++ P+YGMF   E    +WF      ++  YF  G
Sbjct: 722  LGGVKKEFFYCLFAEMIQPEYGMFMYPEGASCMWFPVKPKFEKKRYFFFG 771


>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
          Length = 395

 Score =  113 bits (283), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 143/304 (47%), Gaps = 54/304 (17%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +SLA+   G +FTWG +  G LG    + K++S P  V  LA VS+VQA           
Sbjct: 55  NSLAICADGRLFTWGWNQRGTLG-HPPETKTESSPAPVDALAGVSIVQAA---------- 103

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS--------IPKRVKGLASVSV 117
              G WH LA++D G  + WGG+ +GQ G E+  K+  +        IP+R      + V
Sbjct: 104 --IGGWHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQRCA--PKLKV 159

Query: 118 VQACAGYSHCLVLTSSGVVTCTHKENGCG-----SDP--SQGVQS-NLVQDSHTTITSLN 169
            Q  AG +H +VLT  G V    +    G     S P   QG+++  ++        +L 
Sbjct: 160 RQVAAGGTHSVVLTQDGHVWTWGQPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALT 219

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G L+ WGNNEYGQ+G  ++    ++P RVE L +L +  IA G  HS  L+K    +Y
Sbjct: 220 EDGILWAWGNNEYGQLGTGDTQPR-SQPIRVEGLSDLSLVDIAAGGWHSTALTKE-GEVY 277

Query: 230 AFGIGSAVQL--DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGD 287
           A+G G   +L     KS H  PQ +          + AGED          + ++  GG 
Sbjct: 278 AWGRGEHGRLGFGDDKSSHMVPQKVE---------LLAGED----------IIQVSCGGT 318

Query: 288 HSIV 291
           HS+ 
Sbjct: 319 HSVA 322



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 139/334 (41%), Gaps = 91/334 (27%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS--------IPKRVKGLASVSVVQA 54
           G WH LA++D G  + WGG+ +GQ G E+  K+  +        IP+R      + V Q 
Sbjct: 105 GGWHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQRCA--PKLKVRQV 162

Query: 55  CAGYSHCLVLTSTTGLW----------------------------------HSLALNDCG 80
            AG +H +VLT    +W                                  H+LAL + G
Sbjct: 163 AAGGTHSVVLTQDGHVWTWGQPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTEDG 222

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
            ++ WG + +GQLG  + D + +S P RV+GL+ +S+V   AG  H   LT  G      
Sbjct: 223 ILWAWGNNEYGQLG--TGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEG------ 274

Query: 141 KENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRV 200
                                           E+Y WG  E+G++G  +  ++   PQ+V
Sbjct: 275 --------------------------------EVYAWGRGEHGRLGFGDDKSSHMVPQKV 302

Query: 201 ESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASP 260
           E L    I  ++CG  HS  L++   R++++G G   +L   + V  T   +  P I  P
Sbjct: 303 ELLAGEDIIQVSCGGTHSVALTRD-GRMFSYGRGDHGRLGYGRKV-TTGHPMEVP-IDLP 359

Query: 261 VAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
              T+G DS     G    + +  GG H++   T
Sbjct: 360 PPGTSGGDS----GGQWQARYVACGGRHTLAIAT 389


>gi|395541970|ref|XP_003772909.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC6 [Sarcophilus harrisii]
          Length = 1032

 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 176/393 (44%), Gaps = 67/393 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G +++WG  + GQLG++   K   SIPK +  L+   ++Q   G+    
Sbjct: 97  GKEHSLAICKTGRIYSWGSGSRGQLGIKEV-KDQCSIPKNIAALSRDKIIQVSCGH---- 151

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HS+AL   G+VF+WG + HGQLGL   +  SQ+ P+RV  L  + + Q  A
Sbjct: 152 --------YHSIALTQDGKVFSWGDNDHGQLGL-GTNFPSQASPQRVNSLDGIPLAQVAA 202

Query: 123 GYSHCLVLTSSGVVTC--THKE---------------NGCGSDPSQGV---QSNLVQDSH 162
           G SH   L+ SG       +KE               N C    ++ +   +SN +++  
Sbjct: 203 GGSHSFALSLSGTSYGWGRNKEGQLALSGKNASVVSINYCIWHEAEALTCKRSNSIKEFQ 262

Query: 163 TTITSLN-----SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPI-ALIACGAN 216
                LN     + G++ T+G+N  GQ+G    +  +TKP+  + + +  + + IACG++
Sbjct: 263 GLKELLNRSRQIADGKVLTFGSNNSGQLG----HGLITKPRGPQIVESAELFSQIACGSH 318

Query: 217 HSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSG- 275
           H+   + +  ++ +FG GS          H T  L  G      +       +L+S +  
Sbjct: 319 HTLAYACTSGQVLSFGCGS--------QRHLTNSLQQG-----SLEQNFNISNLISSNDF 365

Query: 276 -GLVVKKIYSGGDHSIVTVTKSSDG-VLSDDFRVLNPATQILDVNFERLKECEREVEQLK 333
            G+ VK I++G + + VT  +  D   L    R L   +QI      +    E   E+ +
Sbjct: 366 TGVRVKDIFAGANSNFVTTIQLEDASSLYATGRSLQQISQINQTLIRKWTTVETGSEEHE 425

Query: 334 SDETLDQDLLLYLETVFLSPGCMNGSFLQVEND 366
             +         +  +F  P C+   FL+  ND
Sbjct: 426 ESKR-------EICEIFSHPACLTACFLKKRND 451



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 127/564 (22%), Positives = 225/564 (39%), Gaps = 114/564 (20%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSL L   G V++ G +++GQLG ++  K  +  P  ++ L +  VV    G  H  
Sbjct: 45  GERHSLLLLADGTVWSCGNNSYGQLGRKNIKKSKRPAP--IQALETQVVVSVSCGKEH-- 100

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     SLA+   G +++WG  + GQLG++   K   SIPK +  L+   ++Q   
Sbjct: 101 ----------SLAICKTGRIYSWGSGSRGQLGIKEV-KDQCSIPKNIAALSRDKIIQVSC 149

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G+ H + LT                           QD           G++++WG+N++
Sbjct: 150 GHYHSIALT---------------------------QD-----------GKVFSWGDNDH 171

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G+  +  +   PQRV SL  +P+A +A G +HSF LS S +  Y +G     QL   
Sbjct: 172 GQLGLGTNFPSQASPQRVNSLDGIPLAQVAAGGSHSFALSLSGTS-YGWGRNKEGQLALS 230

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGL--VVKKIYSGGDHSIVTVTKSSDGV 300
                   + +  W  +  A+T    + +    GL  ++ +     D  ++T   ++ G 
Sbjct: 231 GKNASVVSINYCIWHEAE-ALTCKRSNSIKEFQGLKELLNRSRQIADGKVLTFGSNNSGQ 289

Query: 301 LSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETV--FLSPGC--- 355
           L           QI++             E            L Y  T    LS GC   
Sbjct: 290 LGHGLITKPRGPQIVE-----------SAELFSQIACGSHHTLAYACTSGQVLSFGCGSQ 338

Query: 356 --MNGSFLQVENDEHFS----CNSKKFSFIKLSLI------NWFMKLHF----SIFGQGF 399
             +  S  Q   +++F+     +S  F+ +++  I      N+   +      S++  G 
Sbjct: 339 RHLTNSLQQGSLEQNFNISNLISSNDFTGVRVKDIFAGANSNFVTTIQLEDASSLYATGR 398

Query: 400 GCVCPTVLGDCVPKSWLYLET--------------VFLSPGCMNGSFLQVENDEHFSCNS 445
                + +   + + W  +ET              +F  P C+   FL+  ND     N+
Sbjct: 399 SLQQISQINQTLIRKWTTVETGSEEHEESKREICEIFSHPACLTACFLKKRND-----NT 453

Query: 446 KNPGVDMQLCQDCYDTIARIERESVRSLVSNLAILASHAHLVKSLWNTPPDAEALRMFLT 505
               VD+++ ++ ++ + +      +  ++ +       + +K+L    P  EAL +FL 
Sbjct: 454 IPNDVDLKMARNVFEELIQ------KDWITRMITTCLRDNTLKALPLKSPYQEALSVFLL 507

Query: 506 LPLYHEFMNPRQHEILHMPFAGAL 529
           LP       P   + L MPFA A+
Sbjct: 508 LPECPVMHKPENWQSLVMPFAQAV 531



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 28/195 (14%)

Query: 901  KVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRD------FLCNYPFIFDAKAKTTLL 954
            KV    F++ +L    +   D  +W   +    + D         ++PFIFD  +K  +L
Sbjct: 602  KVPENIFHISELYHKLNFWEDLSKWKYVKAQPQSEDEANNPVIFAHFPFIFDLPSKVKML 661

Query: 955  EMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKK 1014
            E++        +N+       +  +PH L+    ++V R+++VED +R+L +   ND KK
Sbjct: 662  EINS------ILNRQVLAFEEKKTSPHQLH----LKVRRNHLVEDALRQLNKVVDNDLKK 711

Query: 1015 PLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWF 1074
             L V+            F  E   D GGVR+ F   + +E++ PKY MF   EE+  +WF
Sbjct: 712  ELLVS------------FTKEIGPDYGGVRKAFFHYVFEEMIHPKYEMFMYCEESSLMWF 759

Query: 1075 SEDTFEDQNMYFLIG 1089
                  D+  YFL G
Sbjct: 760  PPSPKFDKKNYFLFG 774



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 3/85 (3%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKD 785
           EE+  +WF      D+   FL G LCGL+I N  + N+PFPLALYKK+L++ + L+DL++
Sbjct: 752 EESSLMWFPPSPKFDKKNYFLFGILCGLSIVNGNVANLPFPLALYKKLLNQKLSLEDLQE 811

Query: 786 LSPTLAKSLQD---ILDYREPDLED 807
           LSP   K + +   +LD     +ED
Sbjct: 812 LSPKFGKXINNLKLLLDENAKSIED 836


>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
          Length = 1024

 Score =  113 bits (282), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 159/366 (43%), Gaps = 86/366 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG + HGQLG+      S + P+ V+ LA V + Q  AG +   
Sbjct: 146 GDYHSLALSKGGELFAWGQNLHGQLGV-GRKFPSTTTPQIVEHLAGVPLAQISAGEA--- 201

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL+  G +++WG +  GQLGL     +S+  P  ++ L +  V     
Sbjct: 202 ---------HSMALSMSGNIYSWGKNEFGQLGL--GHTESKDYPSLIEALDNQEVEFLAC 250

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH  +LT  G+                                      L+T+G  ++
Sbjct: 251 GGSHSALLTQDGL--------------------------------------LFTFGAGKH 272

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS     +P  V  LV   +  IACG  H+      + ++++FG G   QL + 
Sbjct: 273 GQLG-HNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 331

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGED-SLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV- 300
            +  +         I  PV +++ E+  L +H+    +  I +GG+ SI+   K  +   
Sbjct: 332 GTRDQL--------IPLPVKVSSSEELKLETHTSEKELIMI-AGGNQSILLWIKKENSYV 382

Query: 301 -LSDDFRVLNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCM 356
            L      LN  T    I DV  +R +  +RE+++                 +F SP C+
Sbjct: 383 NLKRTIPTLNEGTVRRWIADVETKRWQSTKREIQE-----------------IFSSPACL 425

Query: 357 NGSFLQ 362
            GSFL+
Sbjct: 426 TGSFLR 431



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 1/95 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   F  G LCGL+++N  + N+PFPLAL+KK+LD+  
Sbjct: 742 YGMFMYPEGASCMWFPVKPKFEKKRYFFFGVLCGLSLFNCNVANLPFPLALFKKLLDQMP 801

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L K+LQ +LD    + E+VF I F
Sbjct: 802 SLEDLKELSPDLGKNLQTLLDDEGDNFEEVFYIHF 836



 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 15/153 (9%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQME---HAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNI 996
            ++PFIF+  +K  LL  D  +++E   H     +  +  +  +   L    ++ V R+++
Sbjct: 631  HFPFIFNNLSKIKLLHTDTLLKIEGKKHKAYLRSAAIEEERESEFALRPTFDLTVRRNHL 690

Query: 997  VEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEIL 1056
            +ED + +L+Q+   D +K L             V F GE   D GGV++EF   L +E++
Sbjct: 691  IEDVLNQLSQFENEDLRKEL------------WVSFSGEIGYDLGGVKKEFFYCLFEEMI 738

Query: 1057 DPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             P+YGMF   E    +WF      ++  YF  G
Sbjct: 739  QPEYGMFMYPEGASCMWFPVKPKFEKKRYFFFG 771


>gi|387541824|gb|AFJ71539.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score =  112 bits (281), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 158/366 (43%), Gaps = 86/366 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG + HGQLG+      S + P+ V+ LA V + Q  AG +   
Sbjct: 145 GDYHSLALSKGGELFAWGQNLHGQLGV-GRTFPSTTTPQIVEHLAGVPLAQISAGEA--- 200

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL+  G +++WG +  GQLGL     +S+  P  ++ L +  V     
Sbjct: 201 ---------HSMALSMSGNIYSWGKNEFGQLGL--GHTESKDSPSLIEALDNQKVEFLAC 249

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH  +LT  G+                                      L+T+G  ++
Sbjct: 250 GGSHSALLTQDGL--------------------------------------LFTFGAGKH 271

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS     +P  V  LV   +  IACG  H+        ++++FG G   QL + 
Sbjct: 272 GQLG-HNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNG 330

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGED-SLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV- 300
            ++ +         I  PV +++ E+  L SH+    +  I +GG+ SI+   K  +   
Sbjct: 331 GTLDQL--------IPLPVKVSSSEELKLESHTSEKELIMI-AGGNQSILLWIKKENSYV 381

Query: 301 -LSDDFRVLNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCM 356
            L      LN  T    I DV  +R    +RE+++                 +F SP C+
Sbjct: 382 NLKRTIPTLNEGTVKRWIADVETKRWHSTKREIQE-----------------IFSSPACL 424

Query: 357 NGSFLQ 362
            GSFL+
Sbjct: 425 TGSFLR 430



 Score = 83.2 bits (204), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 1/95 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   F  G LCGL+++N  + N+PFPLAL+KK+LD+  
Sbjct: 741 YGMFMYPEGASCMWFPVRPKFEKKRYFFFGLLCGLSLFNCNVANLPFPLALFKKLLDQMP 800

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L K+LQ +LD    + E+VF I F
Sbjct: 801 SLEDLKELSPDLGKNLQTLLDDEGDNFEEVFYIHF 835



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/290 (21%), Positives = 118/290 (40%), Gaps = 42/290 (14%)

Query: 805  LEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQ 864
            + D   +    ++  + +  F +L+ +FK  ++  L         NG++         L+
Sbjct: 518  MSDPSSLVLEEYWATLQESTFSKLVQMFKTAVVCQLDYWDESAEENGNV------QALLE 571

Query: 865  VLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFR 924
            +L+KL+ +N                 ++   P    +V    + +     VC  R  +  
Sbjct: 572  MLKKLHRVNQ----------------MKCQLPESIFQVDELLYRLNFFVEVCR-RCLWKM 614

Query: 925  WISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLN 984
             +    N        ++PFIF+  +K  LL  D  +++E   ++   YL          +
Sbjct: 615  TVDTSENAGCWVIFSHFPFIFNHLSKIKLLHTDTLLKIEGKKHKA--YLMAAAIEEERES 672

Query: 985  QY-----LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAED 1039
            ++      ++ V R++++ED + +L+Q+   D +K L             V F GE   D
Sbjct: 673  EFALMPTFDLTVRRNHLIEDVLNQLSQFENEDLRKEL------------WVSFSGEIGYD 720

Query: 1040 AGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              GV+REF   L +E++ P+YGMF   E    +WF      ++  YF  G
Sbjct: 721  LVGVKREFFYCLFEEMIQPEYGMFMYPEGASCMWFPVRPKFEKKRYFFFG 770



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 8/154 (5%)

Query: 106 PKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQ----DS 161
           PK +K   ++ +     G  H L+L+S G               S   +  ++Q    D 
Sbjct: 88  PKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEYDYSMKHLRSESILQEKKIIQITCGDY 147

Query: 162 HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
           H+   +L+  GEL+ WG N +GQ+G+  +  + T PQ VE L  +P+A I+ G  HS  L
Sbjct: 148 HSL--ALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGEAHSMAL 205

Query: 222 SKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
           S S   +Y++G     QL    +  K +P LI  
Sbjct: 206 SMS-GNIYSWGKNEFGQLGLGHTESKDSPSLIEA 238


>gi|384947464|gb|AFI37337.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score =  112 bits (281), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 158/366 (43%), Gaps = 86/366 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG + HGQLG+      S + P+ V+ LA V + Q  AG +   
Sbjct: 145 GDYHSLALSKGGELFAWGQNLHGQLGV-GRTFPSTTTPQIVEHLAGVPLAQISAGEA--- 200

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL+  G +++WG +  GQLGL     +S+  P  ++ L +  V     
Sbjct: 201 ---------HSMALSMSGNIYSWGKNEFGQLGL--GHTESKDSPSLIEALDNQKVEFLAC 249

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH  +LT  G+                                      L+T+G  ++
Sbjct: 250 GGSHSALLTQDGL--------------------------------------LFTFGAGKH 271

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS     +P  V  LV   +  IACG  H+        ++++FG G   QL + 
Sbjct: 272 GQLG-HNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNG 330

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGED-SLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV- 300
            ++ +         I  PV +++ E+  L SH+    +  I +GG+ SI+   K  +   
Sbjct: 331 GTLDQL--------IPLPVKVSSSEELKLESHTSEKELIMI-AGGNQSILLWIKKENSYV 381

Query: 301 -LSDDFRVLNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCM 356
            L      LN  T    I DV  +R    +RE+++                 +F SP C+
Sbjct: 382 NLKRTIPTLNEGTVKRWIADVETKRWHSTKREIQE-----------------IFSSPACL 424

Query: 357 NGSFLQ 362
            GSFL+
Sbjct: 425 TGSFLR 430



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 1/95 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   F  G LCGL+++N  + N+PFPLAL+KK+LD+  
Sbjct: 741 YGMFMYPEGASCMWFPVRPKFEKKRYFFFGLLCGLSLFNCNVANLPFPLALFKKLLDQMP 800

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L K+LQ +LD    + E+VF I F
Sbjct: 801 SLEDLKELSPDLGKNLQTLLDDEGDNFEEVFYIHF 835



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/290 (21%), Positives = 119/290 (41%), Gaps = 42/290 (14%)

Query: 805  LEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQ 864
            + D   +    ++  + +  F +L+ +FK  ++  L         NG++         L+
Sbjct: 518  MSDPSSLVLEEYWATLQESTFSKLVQMFKTAVVCQLDYWDESAEENGNV------QALLE 571

Query: 865  VLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFR 924
            +L+KL+ +N                 ++   P    +V    + +     VC  R  +  
Sbjct: 572  MLKKLHRVNQ----------------MKCQLPESIFQVDELLYRLNFFVEVCR-RCLWKM 614

Query: 925  WISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLN 984
             +    N        ++PFIF+  +K  LL  D  +++E   ++   YL          +
Sbjct: 615  TVDTSENAGCWVIFSHFPFIFNHLSKIKLLHTDTLLKIEGKKHKA--YLMAAAIEEERES 672

Query: 985  QY-----LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAED 1039
            ++      ++ V R++++ED + +L+Q+   D +K L V+            F GE   D
Sbjct: 673  EFALMPTFDLTVRRNHLIEDVLNQLSQFENEDLRKELWVS------------FSGEIGYD 720

Query: 1040 AGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              GV+REF   L +E++ P+YGMF   E    +WF      ++  YF  G
Sbjct: 721  LVGVKREFFYCLFEEMIQPEYGMFMYPEGASCMWFPVRPKFEKKRYFFFG 770



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 8/154 (5%)

Query: 106 PKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQ----DS 161
           PK +K   ++ +     G  H L+L+S G               S   +  ++Q    D 
Sbjct: 88  PKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEYDYSMKHLRSESILQEKKIIQITCGDY 147

Query: 162 HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
           H+   +L+  GEL+ WG N +GQ+G+  +  + T PQ VE L  +P+A I+ G  HS  L
Sbjct: 148 HSL--ALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGEAHSMAL 205

Query: 222 SKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
           S S   +Y++G     QL    +  K +P LI  
Sbjct: 206 SMS-GNIYSWGKNEFGQLGLGHTESKDSPSLIEA 238


>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
          Length = 449

 Score =  112 bits (281), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 122/255 (47%), Gaps = 56/255 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+A+   G VFTWG  + GQLG+    K+   +P ++  LA + ++Q   G+    
Sbjct: 81  GKEHSVAVCHQGRVFTWGAGSEGQLGI-GESKEISFMPTKINSLAGIKIIQVSCGH---- 135

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL++ G+VF+WG +  GQLGL + +  SQ+ P++VK L  + + Q  A
Sbjct: 136 --------YHSLALSEDGQVFSWGSNRQGQLGLGN-NLCSQASPQKVKSLEGIPLAQVAA 186

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H   L+  G                                        + WGNN  
Sbjct: 187 GGTHSFALSLMGTS--------------------------------------FGWGNNRS 208

Query: 183 GQMGI--NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           GQ+ +  N++   + KP  + +L  L +  I+CG  H+ VL++   +++ FG  S+ QL 
Sbjct: 209 GQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTED-GQVFTFGGSSSEQLQ 267

Query: 241 -SPKSVHKTPQLIHG 254
            SP+S    PQLI G
Sbjct: 268 HSPRSGRGGPQLIEG 282



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 149/362 (41%), Gaps = 77/362 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL++ G+VF+WG +  GQLGL + +  SQ+ P++VK L  + + Q  AG +   
Sbjct: 134 GHYHSLALSEDGQVFSWGSNRQGQLGLGN-NLCSQASPQKVKSLEGIPLAQVAAGGT--- 189

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLASVSVVQAC 121
                    HS AL+  G  F WG +  GQL L     K Q   P  +  L +++VV   
Sbjct: 190 ---------HSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYIS 240

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            GY H  VLT                                        G+++T+G + 
Sbjct: 241 CGYEHTSVLTED--------------------------------------GQVFTFGGSS 262

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
             Q+  ++  +    PQ +E  +   ++ I CG+ H+          Y +  G  V L  
Sbjct: 263 SEQL-QHSPRSGRGGPQLIEG-IGGHVSQIECGSYHTIA--------YVYTTGQVVSLGR 312

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTK-SSDGV 300
             S   T    H     S V        LV     + VK I++G   + VT  + S    
Sbjct: 313 GPSC--TSNATHQEAACSDVTCLLSAKDLVD----IEVKDIFAGAHANFVTTCRVSHTRS 366

Query: 301 LSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSF 360
            S   ++L    +I+ +    +K+  R  ++ K  E   +++ L    +F SP C+  SF
Sbjct: 367 TSVSMKIL---PEIIRITQPLVKKW-RAAKKGKVHEDAKREISL----IFSSPACLTASF 418

Query: 361 LQ 362
           L+
Sbjct: 419 LK 420



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 80/200 (40%), Gaps = 53/200 (26%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+R++    + +++A +G  H L+L S               V++ G ++ GQLG +S  
Sbjct: 12  PRRLEAGTGLKLLKAASGERHSLLLFSNH------------RVYSCGDNSRGQLGQKSP- 58

Query: 100 KKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQ 159
            +S   P+ ++ L++V +     G  H        V  C                     
Sbjct: 59  -QSTKRPEPIQALSTVHIDLVSCGKEHS-------VAVCHQ------------------- 91

Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                       G ++TWG    GQ+GI  S      P ++ SL  + I  ++CG  HS 
Sbjct: 92  ------------GRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSL 139

Query: 220 VLSKSVSRLYAFGIGSAVQL 239
            LS+   +++++G     QL
Sbjct: 140 ALSED-GQVFSWGSNRQGQL 158


>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 364

 Score =  112 bits (281), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 84/268 (31%), Positives = 129/268 (48%), Gaps = 44/268 (16%)

Query: 5   WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
           +H+  L D GEV+T G +  GQLG+   ++  Q +P RV  L +  V     G+ H + +
Sbjct: 45  YHTAFLTDEGEVYTTGSNDAGQLGVRGMEE--QVVPIRVAALDTHMVTHIACGFKHTVAV 102

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
           T T            G + +WGGD +GQLG +S +      P+ VKG   +   +  AG 
Sbjct: 103 TET------------GALASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGG 150

Query: 125 SHCLVLTSSGVV---------TCTHKE-NGCGSDPS-------QGVQSNLVQDSHTTITS 167
            H L LT SG V            H   +GC S PS        GV      ++H+   +
Sbjct: 151 YHTLALTGSGDVYSFGDGSSGALGHGNLDGC-STPSLVKSLWGLGVTQIACGENHS--AA 207

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G+++TWG  +YGQ+G + S   +  P  V++LV+  +  IACG +H+  ++ S  R
Sbjct: 208 LTVDGKVFTWGRGKYGQLG-HGSTQNIKLPVAVKALVDHDVIQIACGGDHTLAIT-SDGR 265

Query: 228 LYAFG------IGSAVQLD--SPKSVHK 247
           L+++G       G   + D  SPK VH+
Sbjct: 266 LFSWGHGLWGQTGHGTKEDVLSPKQVHQ 293



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 73/240 (30%), Positives = 101/240 (42%), Gaps = 60/240 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++A+ + G + +WGGD +GQLG +S +      P+ VKG   +   +  AG  H L
Sbjct: 95  GFKHTVAVTETGALASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTL 154

Query: 63  VLTST----------------------------TGLW------------HSLALNDCGEV 82
            LT +                              LW            HS AL   G+V
Sbjct: 155 ALTGSGDVYSFGDGSSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKV 214

Query: 83  FTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHK 141
           FTWG   +GQLG  S   ++  +P  VK L    V+Q   G  H L +TS G + +  H 
Sbjct: 215 FTWGRGKYGQLGHGST--QNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHG 272

Query: 142 ---ENGCGS-----DPSQGVQSN---LVQDS----HTTITSLNSPGELYTWGNNEYGQMG 186
              + G G+      P Q  Q     LVQ S    HT +  L   GE+Y WG+ E  Q+G
Sbjct: 273 LWGQTGHGTKEDVLSPKQVHQLEGRVLVQVSAGARHTVV--LLDRGEVYGWGDCEQRQLG 330


>gi|224496032|ref|NP_001139103.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
          Length = 992

 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 165/392 (42%), Gaps = 88/392 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL++ G++F WG +THGQLGL      +QS P+ ++ L  + V Q  AG +H  
Sbjct: 123 GDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQS-PQHLQSLCEIPVAQISAGGNHSF 181

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           VL+ +            G VF WG ++ GQLGL   D K + +P  VK L     V    
Sbjct: 182 VLSLS------------GVVFGWGSNSAGQLGL--GDTKDRFVPTIVKSLCGKKTVSISC 227

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H   L+  G V                                      +T+G+  +
Sbjct: 228 GGEHTATLSKGGTV--------------------------------------FTFGSGGF 249

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS      P+ +  L    ++ + CG +H+ V  +S   +Y+FG G   QL + 
Sbjct: 250 GQLG-HNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNG 308

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGEDSLVS---HSGGLVVKKIYSGGDHSIVTVTKSSDG 299
           + V ++  L   P +          + L++   HS  L  K   + G+ S    + S+ G
Sbjct: 309 EQVKQSVPL---PVLLPTECTEFTMEKLITGEHHSFALFFK---NPGNESEKPKSGSNGG 362

Query: 300 VLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGS 359
           +L+ + R++                 +R V +     T+  +    + TVF S   +NGS
Sbjct: 363 ILTLNDRMI-----------------DRWVSESDPWPTVKNE----INTVFSSAASLNGS 401

Query: 360 FLQVENDEHFSCNSKK----FSFIKLSLINWF 387
           FL+   DEH+  + +     F  +K S    F
Sbjct: 402 FLKTSRDEHYQTSVEHCGLDFDLVKTSFAKLF 433



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 16/197 (8%)

Query: 96  ESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQS 155
           E AD+K + +  + + + S+   +A A     ++L   G V    +   C   P + +++
Sbjct: 62  EDADEKLEPLQLQNERIRSIVCGEAGA-----VLLADDGKVLIMDQSTVC--RPLKSLEN 114

Query: 156 NLV-----QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL 210
             V      D H+   +L++ G+L+ WG N +GQ+G+         PQ ++SL  +P+A 
Sbjct: 115 RQVIQIACGDQHSM--ALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQ 172

Query: 211 IACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHGPWIASPVAMTAGEDS 269
           I+ G NHSFVLS S   ++ +G  SA QL    +  +  P ++        V+++ G + 
Sbjct: 173 ISAGGNHSFVLSLS-GVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEH 231

Query: 270 LVSHSGGLVVKKIYSGG 286
             + S G  V    SGG
Sbjct: 232 TATLSKGGTVFTFGSGG 248



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 44/72 (61%)

Query: 722 ITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQ 781
           I E  E+  +WF+          + +G +CG+A+YN   IN+ FPLAL+KK+L +   L 
Sbjct: 715 ILEVHESSLVWFNPHHTRGNKNFYYLGVICGMALYNRHHINIDFPLALFKKLLQQKPSLD 774

Query: 782 DLKDLSPTLAKS 793
           DL++LSP  A+S
Sbjct: 775 DLEELSPVEARS 786


>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
          Length = 675

 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 164/394 (41%), Gaps = 89/394 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG + HGQLG+      S   P+ V+ L+ V +VQ  AG +   
Sbjct: 55  GDYHSLALSKGGELFAWGQNLHGQLGIGRLF-ASIPTPQLVEHLSGVPLVQISAGKA--- 110

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL+  G +++WG +  GQLGL   D   +  P  V+ L S  V     
Sbjct: 111 ---------HSMALSMSGNIYSWGRNDLGQLGLGHTD--GEEFPSLVEALDSQKVEFLAC 159

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH  +LT                                        G+++T+G  ++
Sbjct: 160 GGSHTALLTED--------------------------------------GQVFTFGAGKH 181

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS     +P+ V  L  + +  +ACG  H+      + ++++FG G   QL + 
Sbjct: 182 GQLG-HNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYVSDLGKVFSFGSGKEGQLGNG 240

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVT-VTKSSDGV- 300
            +        H   I  P+ + + ED             + +GG+ SI+  + K +  V 
Sbjct: 241 GT--------HNQLIPLPMKLPSNEDLKFESRTSEKELIMIAGGNQSILLWMGKKNPYVN 292

Query: 301 LSDDFRVLNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMN 357
           L      LN  T    I DV  ++ +  +RE+ +                 +F SP C+ 
Sbjct: 293 LRRKIPTLNEGTIKRWIADVGTKQWQNTKREIRE-----------------IFSSPACLI 335

Query: 358 GSFLQVENDE-----HFSCNSKKFSFIKLSLINW 386
           GSFL+          H   N  + +F +L+  +W
Sbjct: 336 GSFLRERKSAETMLIHLDLNKARSAFKELTQKDW 369



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 21/177 (11%)

Query: 907  FYMPDLATVCDIRIDYFRWISGRPNGSTRD------FLCNYPFIFDAKAKTTLLEMDQRI 960
            F + +L    D   D +R  + + N  T           ++PFIF+  +K  LL  D  +
Sbjct: 501  FKVNELTHWLDFYGDAYRRSAWKINSDTSVDTQYPVIFSHFPFIFNILSKIKLLYADSLL 560

Query: 961  QMEHAMNQTNFYL---FLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLK 1017
            +++    +    L     Q  +   L   L + V R +++ED +  L Q+   D ++ L 
Sbjct: 561  KIQEKKFRACMRLAGIVEQGGSELALLPTLNLTVRRSHLIEDVLSHLNQFENEDLRRELM 620

Query: 1018 VNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWF 1074
            V+            F GE   D+GGV+ EF   L +E+  P+YGMF   EE   +WF
Sbjct: 621  VS------------FSGEIGHDSGGVKVEFFHCLFEEMTRPEYGMFMYPEEASYMWF 665



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 9/122 (7%)

Query: 123 GYSHCLVLTSSGV-----VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTW 177
           G  H L+L+S G       +  H    C       +Q     D H+   +L+  GEL+ W
Sbjct: 15  GAEHMLILSSDGKPFEYNYSIEHARFQCILQEKSIIQIT-CGDYHSL--ALSKGGELFAW 71

Query: 178 GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
           G N +GQ+GI     ++  PQ VE L  +P+  I+ G  HS  LS S   +Y++G     
Sbjct: 72  GQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAGKAHSMALSMS-GNIYSWGRNDLG 130

Query: 238 QL 239
           QL
Sbjct: 131 QL 132


>gi|326506178|dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 389

 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 146/312 (46%), Gaps = 57/312 (18%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +SLA+ D G +FTWG +  G LG    + K++S P  V  L  V +VQA           
Sbjct: 52  NSLAICDDGSLFTWGWNQRGTLG-HPPETKTESSPAHVDALVGVKIVQA----------- 99

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS--------IPKRVKGLASVSV 117
              G WH LA++D G  + WGG+ +GQ G E   K+  +        IP+R      + V
Sbjct: 100 -AIGGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCA--LKLKV 156

Query: 118 VQACAGYSHCLVLTSSGVVTCTHKENGCG-----SDP--SQGV-QSNLVQDSHTTITSLN 169
            Q  AG +H +VLT  G V    +    G     S P   QG+ Q +++        +L+
Sbjct: 157 RQVAAGGTHSVVLTQEGHVWTWGQPWPPGDIKNISTPVRVQGLEQVSMIAVGAFHNLALS 216

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
               L+ WGNNEYGQ+GI ++    ++P RVE L NL +  IA G  HS  L+K    +Y
Sbjct: 217 VDRILWAWGNNEYGQLGIGDTQPR-SQPIRVEGLSNLSLVDIAAGGWHSAALTKE-GEVY 274

Query: 230 AFGIGSAVQL--DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGD 287
           A+G G   +L     KS H  P  +          + AGED          + ++  GG 
Sbjct: 275 AWGRGEHGRLGFGDDKSSHMVPLQVQ---------LLAGED----------IVQVSCGGT 315

Query: 288 HSIVTVTKSSDG 299
           HS+V    +SDG
Sbjct: 316 HSVVL---TSDG 324



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 119/285 (41%), Gaps = 85/285 (29%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS--------IPKRVKGLASVSVVQA 54
           G WH LA++D G  + WGG+ +GQ G E   K+  +        IP+R      + V Q 
Sbjct: 102 GGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCA--LKLKVRQV 159

Query: 55  CAGYSHCLVLTSTTGLW----------------------------------HSLALNDCG 80
            AG +H +VLT    +W                                  H+LAL+   
Sbjct: 160 AAGGTHSVVLTQEGHVWTWGQPWPPGDIKNISTPVRVQGLEQVSMIAVGAFHNLALSVDR 219

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
            ++ WG + +GQLG+   D + +S P RV+GL+++S+V   AG  H   LT  G      
Sbjct: 220 ILWAWGNNEYGQLGI--GDTQPRSQPIRVEGLSNLSLVDIAAGGWHSAALTKEG------ 271

Query: 141 KENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRV 200
                                           E+Y WG  E+G++G  +  ++   P +V
Sbjct: 272 --------------------------------EVYAWGRGEHGRLGFGDDKSSHMVPLQV 299

Query: 201 ESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
           + L    I  ++CG  HS VL+ S  R++++G G   +L   + V
Sbjct: 300 QLLAGEDIVQVSCGGTHSVVLT-SDGRIFSYGRGDHGRLGDGRKV 343


>gi|348508280|ref|XP_003441682.1| PREDICTED: leucine-rich repeat and WD repeat-containing protein
            KIAA1239-like [Oreochromis niloticus]
          Length = 2697

 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 130/282 (46%), Gaps = 50/282 (17%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            H LA++  G VF+WG    GQLGL      S   P +V     + ++Q   G SH     
Sbjct: 1772 HCLAVSASGHVFSWGAGEDGQLGLLPTPSSSHR-PSKVPIPLPIPIIQVACGNSH----- 1825

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                   SLAL   G+VF+WG ++HGQLGL   +   Q  P  +  LA V+V Q  AG +
Sbjct: 1826 -------SLALTKGGDVFSWGLNSHGQLGL-GKEVPVQHTPVIICALAGVAVTQIAAGGT 1877

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQ------------------------DS 161
            H L LT + +V C      CG++    +  N V                         +S
Sbjct: 1878 HSLFLTLADLVYC------CGANKCGQLGVNRVDEKGRFNICMVPALRPLSVSFISCGES 1931

Query: 162  HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
            H+ +  L   G++YT+G+   GQ+G + S   V KP+ V  L + P + IACG +H+ VL
Sbjct: 1932 HSAV--LTKDGKVYTFGDGSQGQLGHSTSANEV-KPKLVAGL-DGPASQIACGRHHTLVL 1987

Query: 222  SKSVSRLYAFGIGSAVQL-DSPKSVHKTPQLIHGPWIASPVA 262
              S  +L+AFG G+  Q  +       TP L+  PW     A
Sbjct: 1988 GSS-GQLWAFGSGAKGQTGNGHNDSCLTPTLVQFPWTTDDTA 2028



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 128/273 (46%), Gaps = 43/273 (15%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  H+L LN  G V + G ++ GQLG +   KK+  I  +V+ L SV V  AC G  HCL
Sbjct: 1719 GDRHTLFLNADGNVLSCGHNSQGQLGRQK--KKNGKIIAQVEALGSV-VAMAC-GQDHCL 1774

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             ++++            G VF+WG    GQLGL      S   P +V     + ++Q   
Sbjct: 1775 AVSAS------------GHVFSWGAGEDGQLGLLPTPSSSHR-PSKVPIPLPIPIIQVAC 1821

Query: 123  GYSHCLVLTSSGVVTC----THKENGCGSD-PSQGVQSNLVQDSHTTITSLNSPGE---- 173
            G SH L LT  G V      +H + G G + P Q     +   +   +T + + G     
Sbjct: 1822 GNSHSLALTKGGDVFSWGLNSHGQLGLGKEVPVQHTPVIICALAGVAVTQIAAGGTHSLF 1881

Query: 174  ------LYTWGNNEYGQMGINNSNTTVTKPQR-----VESLVNLPIALIACGANHSFVLS 222
                  +Y  G N+ GQ+G+N     V +  R     V +L  L ++ I+CG +HS VL+
Sbjct: 1882 LTLADLVYCCGANKCGQLGVNR----VDEKGRFNICMVPALRPLSVSFISCGESHSAVLT 1937

Query: 223  KSVSRLYAFGIGSAVQLDSPKSVHKT-PQLIHG 254
            K   ++Y FG GS  QL    S ++  P+L+ G
Sbjct: 1938 KD-GKVYTFGDGSQGQLGHSTSANEVKPKLVAG 1969



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 115/276 (41%), Gaps = 79/276 (28%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            ++F WG  + GQ G        Q+ P  V       + + C G  H            +L
Sbjct: 1684 QLFCWGDSSSGQFG-------PQAAPSPVSWTVPGVITKICCGDRH------------TL 1724

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG 134
             LN  G V + G ++ GQLG +   KK+  I  +V+ L SV V  AC G  HCL +++SG
Sbjct: 1725 FLNADGNVLSCGHNSQGQLGRQK--KKNGKIIAQVEALGSV-VAMAC-GQDHCLAVSASG 1780

Query: 135  VVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTV 194
             V                                      ++WG  E GQ+G+  + ++ 
Sbjct: 1781 HV--------------------------------------FSWGAGEDGQLGLLPTPSSS 1802

Query: 195  TKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHG 254
             +P +V   + +PI  +ACG +HS  L+K    ++++G+ S  QL   K V         
Sbjct: 1803 HRPSKVPIPLPIPIIQVACGNSHSLALTKG-GDVFSWGLNSHGQLGLGKEV--------- 1852

Query: 255  PWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSI 290
            P   +PV + A          G+ V +I +GG HS+
Sbjct: 1853 PVQHTPVIICA--------LAGVAVTQIAAGGTHSL 1880



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 1/90 (1%)

Query: 725  YEETRSI-WFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDL 783
            Y E++++ WF      ++   FL G LCGLA+YN+ II++ FP AL+KK+L     L D+
Sbjct: 2410 YNESQTVAWFPPKPKVEEKTYFLFGVLCGLALYNHNIIHLRFPQALFKKLLRVKPTLDDM 2469

Query: 784  KDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            K+  P LA+S + +L+   PD+      TF
Sbjct: 2470 KEFDPVLAESWRIMLEDYTPDVVQTLDTTF 2499



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 78/411 (18%), Positives = 149/411 (36%), Gaps = 113/411 (27%)

Query: 750  LCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVF 809
            +C L   + T +  P  + +   +L  P+L +D   ++  ++ ++  I +  E  LE   
Sbjct: 2140 VCDLLYLSRTALKSPEIILI---LLTCPLLQEDSNVMNAVISVAIT-IAEMSEKTLE--- 2192

Query: 810  GITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKL 869
              T R W+  +      + I++FK  L ++L+  G+++      T N  + F L+ L+ L
Sbjct: 2193 --TLRKWWSSLPPSILMKHIMVFKNALAFMLKN-GLLE------THNPGVKFFLEALKLL 2243

Query: 870  NSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRW---I 926
               N           G++             KV  + FY+ ++       +D   W    
Sbjct: 2244 YKANK---------AGKSY------------KVPLSTFYVEEITNAVQPEVDIMLWWQFS 2282

Query: 927  SGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTF-----NPH 981
                + +T      YPF+     K  +  +       +A    + + F          PH
Sbjct: 2283 KKEDDVNTPAIFSRYPFLLTLLHKVAIFNI-------YAATVKDVHRFAHRVALVPDQPH 2335

Query: 982  TLNQ----YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEA 1037
              +       ++ + R ++VEDT R+L       F++ L V     +++        E+ 
Sbjct: 2336 APDSPPAPVFQLTLRRTHLVEDTFRQLGAADHCAFQRELLV-----LFV--------EDR 2382

Query: 1038 EDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTY 1097
            ++    +R+F + +  E++ P+  MF   E     WF      ++  YF           
Sbjct: 2383 KETNVNKRDFFLHVFDELMAPESKMFIYNESQTVAWFPPKPKVEEKTYF----------- 2431

Query: 1098 ISKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV---RFP 1145
                                          L G LCGLA+YN+ +   RFP
Sbjct: 2432 ------------------------------LFGVLCGLALYNHNIIHLRFP 2452


>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 277

 Score =  112 bits (280), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 88/297 (29%), Positives = 135/297 (45%), Gaps = 54/297 (18%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           VF+WG    GQLG+   D   Q  P  V  L  V ++      +H      T G +H+ A
Sbjct: 1   VFSWGRGEDGQLGI--GDTSDQDEPTYVDALRGVGII------THV-----TCGSYHTAA 47

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +   G+++TWGG  +G+LG    ++   S P+RV+ L  +S+V    G  H  V+TS G 
Sbjct: 48  VASNGDLYTWGGGMYGKLG--HGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVTSKGC 105

Query: 136 V-TCTHKENG-CGSDPSQGVQ-----------SNLVQDS----HTTITSLNSPGELYTWG 178
           + T   KENG  G   ++G Q             +VQ S    HT    L    E + WG
Sbjct: 106 LYTWGDKENGVAGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHT--ACLTDDHETFAWG 163

Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
             ++G++G N +      P+ +ESL+      +ACG  HS V+++   ++Y FG G   Q
Sbjct: 164 EGKFGRLG-NGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRD-GKMYTFGGGEHGQ 221

Query: 239 LDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTK 295
           L     V+K                   + +LV    G+VVK+I  G  HS+   ++
Sbjct: 222 LGHADKVNKL------------------KPTLVEALDGVVVKQITCGWSHSVALTSE 260



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 18/131 (13%)

Query: 5   WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHCLV 63
           +H+  L D  E F WG    G+LG  +  +++   P+ ++ L      Q AC G+     
Sbjct: 148 FHTACLTDDHETFAWGEGKFGRLG--NGTERNCHSPRLIESLIGKYPCQVACGGF----- 200

Query: 64  LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG 123
                   HS  +   G+++T+GG  HGQLG   ADK ++  P  V+ L  V V Q   G
Sbjct: 201 --------HSAVITRDGKMYTFGGGEHGQLG--HADKVNKLKPTLVEALDGVVVKQITCG 250

Query: 124 YSHCLVLTSSG 134
           +SH + LTS G
Sbjct: 251 WSHSVALTSEG 261


>gi|442749159|gb|JAA66739.1| Putative hect e3 ubiquitin ligase [Ixodes ricinus]
          Length = 287

 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/92 (57%), Positives = 67/92 (72%)

Query: 723 TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQD 782
           TEY E+R IWF+  +FE+  M +LIG +CGLAIYN+TII +PFPL LYKK+L + + L D
Sbjct: 3   TEYPESRCIWFNTQSFEEDVMYYLIGIVCGLAIYNFTIIALPFPLVLYKKLLKQKVTLND 62

Query: 783 LKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
           L  LSPTLAK LQ++L Y   DLE VF + F 
Sbjct: 63  LGGLSPTLAKVLQELLSYEGDDLEGVFFLNFE 94



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 24/40 (60%), Positives = 32/40 (80%)

Query: 1103 MFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
            MF EY E+R IWF+  +FE+  MY+LIG +CGLAIYN+T+
Sbjct: 1    MFTEYPESRCIWFNTQSFEEDVMYYLIGIVCGLAIYNFTI 40



 Score = 40.0 bits (92), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 16/28 (57%), Positives = 21/28 (75%)

Query: 1062 MFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            MF EY E+R IWF+  +FE+  MY+LIG
Sbjct: 1    MFTEYPESRCIWFNTQSFEEDVMYYLIG 28


>gi|294462324|gb|ADE76711.1| unknown [Picea sitchensis]
          Length = 390

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 152/314 (48%), Gaps = 57/314 (18%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +SLA+ + G++FTWG +  G LG    + K++S P +VK L +V +VQA           
Sbjct: 51  NSLAICEDGQLFTWGWNQRGTLG-HPPESKTESTPTQVKALENVKIVQAA---------- 99

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS--------IPKRVKGLASVSV 117
              G WH LA++D G+ + WGG+ +GQ G E   K+  S        IP+R      + V
Sbjct: 100 --IGGWHCLAVDDQGQAYAWGGNEYGQCGEEPERKEDGSKVLRRDIAIPQRC--APQLRV 155

Query: 118 VQACAGYSHCLVLTSSGVVTCTHKENGCG-----SDP--SQGVQS-NLVQDSHTTITSLN 169
            Q  AG +H +VLT +G V    +    G     S P   QG+++  L+        +L 
Sbjct: 156 RQVAAGGTHSVVLTHNGHVWTWGQPWPPGDIKQISTPVRVQGLENVQLIAVGAFHNLALL 215

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             GE++ WGNNEYGQ+G  ++    ++P  V+ L  L +A IA G  HS  L+   + +Y
Sbjct: 216 EEGEVWAWGNNEYGQLGTGDTQPR-SQPVPVQGLSGLILADIAAGGWHSTALTTD-AEVY 273

Query: 230 AFGIGSAVQL--DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGD 287
           A+G G   +L     KS    PQ +H         + AGE           + ++  GG 
Sbjct: 274 AWGRGEHGRLGFGDDKSSKMVPQKVH---------LLAGE----------TIAQVSCGGT 314

Query: 288 HSIVTVTKSSDGVL 301
           HS   V +++DG +
Sbjct: 315 HS---VARTADGRI 325



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 138/338 (40%), Gaps = 92/338 (27%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS--------IPKRVKGLASVSVVQA 54
           G WH LA++D G+ + WGG+ +GQ G E   K+  S        IP+R      + V Q 
Sbjct: 101 GGWHCLAVDDQGQAYAWGGNEYGQCGEEPERKEDGSKVLRRDIAIPQRCA--PQLRVRQV 158

Query: 55  CAGYSHCLVLTSTTGLW----------------------------------HSLALNDCG 80
            AG +H +VLT    +W                                  H+LAL + G
Sbjct: 159 AAGGTHSVVLTHNGHVWTWGQPWPPGDIKQISTPVRVQGLENVQLIAVGAFHNLALLEEG 218

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
           EV+ WG + +GQLG      +SQ +P  V+GL+ + +    AG  H   LT+        
Sbjct: 219 EVWAWGNNEYGQLGTGDTQPRSQPVP--VQGLSGLILADIAAGGWHSTALTTDA------ 270

Query: 141 KENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRV 200
                                           E+Y WG  E+G++G  +  ++   PQ+V
Sbjct: 271 --------------------------------EVYAWGRGEHGRLGFGDDKSSKMVPQKV 298

Query: 201 ESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASP 260
             L    IA ++CG  HS V   +  R++++G     +L   + V        G  +  P
Sbjct: 299 HLLAGETIAQVSCGGTHS-VARTADGRIFSYGRADHGRLGYGRKV------TTGHPMEVP 351

Query: 261 VAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSD 298
           + +   +++   +SG   VK +  GG H++ T +  S+
Sbjct: 352 IGIRPPKNA-AENSGCWFVKLVACGGRHTLATASWESE 388


>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
          Length = 923

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 153/364 (42%), Gaps = 84/364 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG + HGQLG+      S + P+ V+ L+ V + Q  AG S   
Sbjct: 44  GDYHSLALSKGGELFAWGQNLHGQLGVGKI-FDSTTAPQIVEHLSGVPLAQISAGKS--- 99

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL+  G +++WG +  GQLGL   D K    P  ++ L +  V     
Sbjct: 100 ---------HSMALSVSGNIYSWGRNDFGQLGLGHTDDK--DFPSLIEALENQKVEFLAC 148

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH  +LT  G+V                                      +T+G  +Y
Sbjct: 149 GGSHTALLTKDGLV--------------------------------------FTFGAGKY 170

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS     +P  V  L    +  +ACG  H+      + ++++FG G   QL + 
Sbjct: 171 GQLG-HNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYVSDLGKVFSFGSGEEGQLGNG 229

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVLS 302
            +        H   I  P+ + + E+    +        I +GG+ SI+   K  +  ++
Sbjct: 230 GT--------HNQLIPLPMKLPSNEELKFENRTSEKELIIIAGGNQSILLWIKKENPYVN 281

Query: 303 DDFRV--LNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMN 357
              ++  LN  T    I DV  ++ +  +RE+ +                 +F SP C+ 
Sbjct: 282 LRRKIPTLNEGTVKRWIADVGTKQWQNTKREIRE-----------------IFSSPACLT 324

Query: 358 GSFL 361
           GSF+
Sbjct: 325 GSFV 328



 Score = 77.8 bits (190), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 53/80 (66%), Gaps = 1/80 (1%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y EE   +WF      ++   F  G LCGL+++N  + N+PFPLAL+KK+LD+  
Sbjct: 641 YGMFMYPEEASYMWFPARPKFEKKRYFFFGVLCGLSLFNCNVANIPFPLALFKKLLDQTP 700

Query: 779 LLQDLKDLSPTLAKSLQDIL 798
            L+DLK+LSP L KSLQ +L
Sbjct: 701 SLEDLKELSPVLGKSLQTLL 720



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 84/201 (41%), Gaps = 39/201 (19%)

Query: 907  FYMPDLATVCDIRIDYFRWISGRPNGSTRD------FLCNYPFIFDAKAKTTLLEMDQRI 960
            F + +L    D   D +R  S + N  T           ++PFIF+  +K  LL  D  +
Sbjct: 491  FKVNELTHWLDFYGDAYRRSSWKMNSDTSVDIQYPVIFSHFPFIFNILSKIKLLYADSLL 550

Query: 961  QMEHAMNQTNFYL------------FLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYT 1008
            +++    +    L            +L TFN         + V R +++ED + +L Q+ 
Sbjct: 551  KIQEKKFRACMQLAGIVEHGGSSLTWLPTFN---------LTVRRSHLIEDVLSQLNQFE 601

Query: 1009 TNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEE 1068
              D +K L             V F GE   D GGV+ EF   L +E++ P+YGMF   EE
Sbjct: 602  NEDLRKEL------------MVSFIGEIGHDFGGVKAEFFHCLFEEMIRPEYGMFMYPEE 649

Query: 1069 TRSIWFSEDTFEDQNMYFLIG 1089
               +WF      ++  YF  G
Sbjct: 650  ASYMWFPARPKFEKKRYFFFG 670



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 17/126 (13%)

Query: 123 GYSHCLVLTSSGV-----VTCTHKENGCGSDPSQGVQSNLVQ----DSHTTITSLNSPGE 173
           G  H L+L+S G       +  H    C        + N++Q    D H+   +L+  GE
Sbjct: 4   GAEHMLILSSDGKPFEYNYSIEHARFQCILQ-----EKNIIQITCGDYHSL--ALSKGGE 56

Query: 174 LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
           L+ WG N +GQ+G+     + T PQ VE L  +P+A I+ G +HS  LS S   +Y++G 
Sbjct: 57  LFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISAGKSHSMALSVS-GNIYSWGR 115

Query: 234 GSAVQL 239
               QL
Sbjct: 116 NDFGQL 121


>gi|408500684|ref|YP_006864603.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465508|gb|AFU71037.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1173

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 30/243 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS A+   G ++TWG ++HGQLG ++ADK   S P + +  A V+ V   AGY   + L 
Sbjct: 719 HSAAVGSDGSLYTWGDNSHGQLGRDTADKP-DSHPSKAEAPAGVTFVHVSAGYGFSVALA 777

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           S             G +++WG ++ GQLG         + P +V+  A ++ VQA AG S
Sbjct: 778 SD------------GSLYSWGDNSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASAGGS 825

Query: 126 HCLVLTSSG---------------VVTCTHKENGCG-SDPSQGVQSNLVQDSHTTITSLN 169
           H + L+S G                VT  +  +  G +D    V    V        +++
Sbjct: 826 HVVALSSDGNIYTWGDNSAGQLGRTVTSNNPADKPGKADTPADVTFTSVSAGQGHTVAVD 885

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           + G++YTWG+N +G++G + ++T   KP + ++   +     + G +HS  +S   S +Y
Sbjct: 886 TQGDVYTWGDNTHGELGRSTTSTPADKPGKADTPAGITFTQASAGESHSVAVSDDGS-IY 944

Query: 230 AFG 232
            +G
Sbjct: 945 TWG 947



 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 106/261 (40%), Gaps = 29/261 (11%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S+AL   G +++WG ++ GQLG         + P +V+  A ++ VQA AG SH + L+S
Sbjct: 773  SVALASDGSLYSWGDNSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASAGGSHVVALSS 832

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
                         G ++TWG ++ GQLG           P +    A V+     AG  H
Sbjct: 833  D------------GNIYTWGDNSAGQLGRTVTSNNPADKPGKADTPADVTFTSVSAGQGH 880

Query: 127  CLVLTSSGVV---------------TCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSP 171
             + + + G V               T T  +    +D   G+         +   +++  
Sbjct: 881  TVAVDTQGDVYTWGDNTHGELGRSTTSTPADKPGKADTPAGITFTQASAGESHSVAVSDD 940

Query: 172  GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
            G +YTWG+   G++G + + T   KP + ++   +     + G  HS  L    S LY +
Sbjct: 941  GSIYTWGDTANGRLGRDTNITPADKPGKADTPAGVTFTQASAGGKHSIALGSDGS-LYTW 999

Query: 232  GIGSAVQLDSPKSVHKTPQLI 252
            G         P  V  TP  I
Sbjct: 1000 GDSGKTSAGRPNKV-DTPAGI 1019



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 118/270 (43%), Gaps = 50/270 (18%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESAD---KKSQSI---PKRVKGLASVSVVQAC 55
           TG  H LA+   G +++WG +  G+LG E+     K +  I   PK V   A V   QAC
Sbjct: 225 TGYTHFLAIGSDGNLYSWGNNADGELGRETVSTTPKDNPQIDNQPKLVTPPAGVHFTQAC 284

Query: 56  AGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV---KGL 112
           AG             WHSLAL   G +++WG + +G+LG ++        P +V   KG+
Sbjct: 285 AG------------KWHSLALGSDGNLYSWGENKYGELGRDTGSAIYDVKPGKVNLPKGI 332

Query: 113 ASVSVVQACAGYSHCLVLTSSGVVTC----THKENG--CGSDP-----------SQGVQS 155
               + Q  AG  + + L S G +      T+ E G   G  P             GV+ 
Sbjct: 333 --TKITQISAGTFYSMALDSDGDLYSWGDNTYDELGRYAGGYPFRDRSPRKMTMPAGVKK 390

Query: 156 -NLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL---- 210
              ++    T  + +S G LY+WG NEYGQ+G    NT   +  R    V +P  +    
Sbjct: 391 FTWIKAGEWTSLATSSDGSLYSWGWNEYGQLG---RNTAPARQDRTPRKVTMPAGVTKFT 447

Query: 211 -IACGANHSFVLSKSVSRLYAFGIGSAVQL 239
            ++    HS  L  S   LY++G+    QL
Sbjct: 448 KVSAEHRHSLALG-SDGNLYSWGLNDCKQL 476



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 103/261 (39%), Gaps = 63/261 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV---KGLASVSVVQACAGYS 59
           G WHSLAL   G +++WG + +G+LG ++        P +V   KG+  ++ + A   YS
Sbjct: 286 GKWHSLALGSDGNLYSWGENKYGELGRDTGSAIYDVKPGKVNLPKGITKITQISAGTFYS 345

Query: 60  HCL--------------------------------VLTSTTGL----------WHSLALN 77
             L                                 +T   G+          W SLA +
Sbjct: 346 MALDSDGDLYSWGDNTYDELGRYAGGYPFRDRSPRKMTMPAGVKKFTWIKAGEWTSLATS 405

Query: 78  DCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS-VVQACAGYSHCLVLTSSGVV 136
             G +++WG + +GQLG  +A  +    P++V   A V+   +  A + H L L S G +
Sbjct: 406 SDGSLYSWGWNEYGQLGRNTAPARQDRTPRKVTMPAGVTKFTKVSAEHRHSLALGSDGNL 465

Query: 137 ------TCTHKENGCGS-----------DPSQGVQSNLVQDSHTTITSLNSPGELYTWGN 179
                  C       GS            P+   Q   V   ++   ++ S G LY+WG 
Sbjct: 466 YSWGLNDCKQLGRDTGSAKYDVKPGKVPTPAGVAQFTEVSAGYSHSLAIGSDGNLYSWGQ 525

Query: 180 NEYGQMGINNSNTTVTKPQRV 200
           N+YG++G   S    + P  V
Sbjct: 526 NKYGELGRPTSGKYDSSPGMV 546



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 115/283 (40%), Gaps = 56/283 (19%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           S A+   G ++ WG D + +LG    +K++ S+   V     V   Q   GY+H L + S
Sbjct: 180 SQAIASDGNLYRWG-DNNYKLGTPEDEKRTPSL---VNPPTGVHFTQVSTGYTHFLAIGS 235

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD---KKSQSI---PKRVKGLASVSVVQA 120
                        G +++WG +  G+LG E+     K +  I   PK V   A V   QA
Sbjct: 236 D------------GNLYSWGNNADGELGRETVSTTPKDNPQIDNQPKLVTPPAGVHFTQA 283

Query: 121 CAGYSHCLVLTSSGVVTC--THKENGCGSDPSQGVQ-------------SNLVQDSHTTI 165
           CAG  H L L S G +     +K    G D    +              + + Q S  T 
Sbjct: 284 CAGKWHSLALGSDGNLYSWGENKYGELGRDTGSAIYDVKPGKVNLPKGITKITQISAGTF 343

Query: 166 TS--LNSPGELYTWGNNEYGQMG--------INNSNTTVTKPQRVESLVNLPIALIACGA 215
            S  L+S G+LY+WG+N Y ++G         + S   +T P  V+         I  G 
Sbjct: 344 YSMALDSDGDLYSWGDNTYDELGRYAGGYPFRDRSPRKMTMPAGVKKFT-----WIKAGE 398

Query: 216 NHSFVLSKSVSRLYAFGIGSAVQLD---SPKSVHKTPQLIHGP 255
             S   S   S LY++G     QL    +P    +TP+ +  P
Sbjct: 399 WTSLATSSDGS-LYSWGWNEYGQLGRNTAPARQDRTPRKVTMP 440



 Score = 48.5 bits (114), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 149 PSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPI 208
           P++G++ +          ++ S G LYTWG+N +GQ+G + ++   + P + E+   +  
Sbjct: 704 PARGIRISQADGGDLHSAAVGSDGSLYTWGDNSHGQLGRDTADKPDSHPSKAEAPAGVTF 763

Query: 209 ALIACGANHSFVLSKSVSRLYAFGIGSAVQLD---SPKSVHKTPQLIHGPWIASPVAMTA 265
             ++ G   S  L+   S LY++G  S  QL    +  +    P  +  P   + V  +A
Sbjct: 764 VHVSAGYGFSVALASDGS-LYSWGDNSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASA 822

Query: 266 GEDSLVSHSGGLVVKKIYSGGDHS 289
           G   +V+ S       IY+ GD+S
Sbjct: 823 GGSHVVALS---SDGNIYTWGDNS 843


>gi|341881795|gb|EGT37730.1| hypothetical protein CAEBREN_12441 [Caenorhabditis brenneri]
          Length = 755

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 132/284 (46%), Gaps = 59/284 (20%)

Query: 805  LEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQ 864
            + +  G    NW+  +S  +F R++ +FK  ++ L+          G   FN      L 
Sbjct: 242  VHETMGKVLENWWCHLSTRHFRRMVTVFKTAVVTLMHA--------GKTPFN--CQKYLH 291

Query: 865  VLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFR 924
            +LQKL  +N       I                         FY+ ++A    ++ DY+ 
Sbjct: 292  LLQKLFMINKSYHIIPIET-----------------------FYINEIAQTICLKQDYYN 328

Query: 925  WISGR-PNGSTRDFLCNYPFIFDAKAKTTLLEMD----QRIQMEHAM-------NQTNFY 972
             ++ + P+ + +D+   YPF+ +  AK  +L +D    Q I  + A+       NQ+  +
Sbjct: 329  MVTKQEPHKTEKDYWTYYPFLLNGAAKGEILFVDSCLMQTIHSQQAIYQSFGEENQSEVF 388

Query: 973  LFLQTFNPHTLN-QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVK 1031
               +    H  N Q   +EV R+ IV DT+ +L   +  D +KPLKV            K
Sbjct: 389  SEAER-EAHLRNIQSCYLEVRREFIVMDTMNKLPTLSDQDLRKPLKV------------K 435

Query: 1032 FRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFS 1075
              GEEA+DAGGVR+EF ++++++IL P YGMF E EE+  +WFS
Sbjct: 436  IMGEEADDAGGVRKEFFLIVMRKILQPAYGMFSEDEESHLVWFS 479



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/97 (51%), Positives = 66/97 (68%), Gaps = 3/97 (3%)

Query: 720 YGI-TEYEETRSIWFS--EDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDE 776
           YG+ +E EE+  +WFS     F ++     +G L  LAIYN+TI+  PFPLALYK +LD 
Sbjct: 464 YGMFSEDEESHLVWFSGLPAEFCEREQFHQLGRLVALAIYNFTIVPFPFPLALYKYLLDT 523

Query: 777 PILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           P  L+DL +LSPT  KSLQ +LDY   D+E+VFG+TF
Sbjct: 524 PPTLEDLMELSPTEGKSLQSLLDYEGDDVEEVFGLTF 560


>gi|440904418|gb|ELR54938.1| E3 ISG15--protein ligase HERC5, partial [Bos grunniens mutus]
          Length = 1009

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 164/396 (41%), Gaps = 93/396 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG +  GQLG+      S S P+ V+ L+ V +VQ  AG +   
Sbjct: 130 GDYHSLALSKGGELFAWGQNLDGQLGVGRI-FASTSTPEIVENLSGVPLVQISAGEA--- 185

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL+  G V++WG +  GQLGL     K    P  ++ L    V     
Sbjct: 186 ---------HSMALSMSGNVYSWGRNDCGQLGLGHTYNKDS--PSCIETLDDQKVEFLAC 234

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H  +LT SG+V                                      +T+G+ +Y
Sbjct: 235 GGCHTALLTKSGLV--------------------------------------FTFGDGKY 256

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS     +P+ V  LV   +  IACG  H+        ++++FG G   QL + 
Sbjct: 257 GQLG-HNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNG 315

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKK--IYSGGDHSIVTVTKSSDGV 300
            + +   QLI       P  M       +       VK+  I +GG+ SI+   +  +  
Sbjct: 316 GTRN---QLI-------PRPMKLLSSEELKSESSTSVKELIIVAGGNQSILIWMEKENSY 365

Query: 301 --LSDDFRVLNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGC 355
             L      LN  T    I DV  +R +  +RE+ +                 +F SP C
Sbjct: 366 VNLRRKIPTLNEGTVKRWIADVGTKRWQNTKREIRE-----------------IFSSPAC 408

Query: 356 MNGSFLQVENDE-----HFSCNSKKFSFIKLSLINW 386
           + GSFL+   D      H   N+ + +F +L+  +W
Sbjct: 409 LTGSFLRERIDGEMISIHLDLNTARNTFKELTQKDW 444



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 62/95 (65%), Gaps = 1/95 (1%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y EE   +WF      ++   F  G LCGL+++N  + ++PFPLAL+KK+LD+  
Sbjct: 727 YGMFTYPEEASYMWFPVRPKFEKKSYFFFGLLCGLSLFNCNVADIPFPLALFKKLLDQTP 786

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L +SLQ +LD    DLE+VF I F
Sbjct: 787 SLEDLKELSPVLGESLQTLLDDDGDDLEEVFHIHF 821



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 33/162 (20%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLF------------LQTFNPHTLNQYL 987
            ++PFIF+  +K  LL  D  ++++    +    L             L TFN        
Sbjct: 616  HFPFIFNILSKIKLLYADSLLKIQEKKFRACMRLAGIVDQERSALSSLPTFN-------- 667

Query: 988  EVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREF 1047
             + V R +++ED   +L Q+   D ++ L             V F GE   + GGVR EF
Sbjct: 668  -LIVRRSHLIEDVFSQLNQFENEDLRREL------------MVSFSGEIGYNFGGVRAEF 714

Query: 1048 LMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
               L +E+  P+YGMF   EE   +WF      ++  YF  G
Sbjct: 715  FYCLFQEMTRPEYGMFTYPEEASYMWFPVRPKFEKKSYFFFG 756



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 25/157 (15%)

Query: 106 PKRVKGLASVSVVQACAGYSHCLVLTSSGV-----VTCTHKENGCGSDPSQGVQSNLVQ- 159
           PK +K    + +     G  H LVL+S G       +  H    C        + N++Q 
Sbjct: 73  PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYSIEHARFQCILQ-----EKNIIQI 127

Query: 160 ---DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN 216
              D H+   +L+  GEL+ WG N  GQ+G+     + + P+ VE+L  +P+  I+ G  
Sbjct: 128 TCGDYHSL--ALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEA 185

Query: 217 HSFVLSKSVSRLYAF--------GIGSAVQLDSPKSV 245
           HS  LS S   +Y++        G+G     DSP  +
Sbjct: 186 HSMALSMS-GNVYSWGRNDCGQLGLGHTYNKDSPSCI 221


>gi|356573964|ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 395

 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 140/306 (45%), Gaps = 53/306 (17%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADK---KSQSIPKRVKGLASVSVVQACAGYSHCL 62
           +SLA+ D G++FTWG +    LG  +  K   K+++ P +VK L+SV +VQA        
Sbjct: 49  NSLAIADDGKLFTWGWNQRATLGHPAETKSENKTENTPSQVKALSSVKIVQAA------- 101

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKR------VKGLASVS 116
                 G WH LA++D G  + WGG+ +GQ G E   K     P R       +    + 
Sbjct: 102 -----IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKLV 156

Query: 117 VVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPS-------QGVQS-NLVQDSHTTITSL 168
           V Q  AG +H +VLT  G V    +    G           QG+++  L+        +L
Sbjct: 157 VRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLAL 216

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
              G L+ WGNNEYGQ+G  ++    ++P RV+ L +L +  IA G  HS  L+     +
Sbjct: 217 QEDGTLWAWGNNEYGQLGTGDTQPR-SQPIRVQGLSDLTLVDIAAGGWHSTALTDE-GEV 274

Query: 229 YAFGIGSAVQL---DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
           Y +G G   +L   DS KS    PQ          V + AGED          + ++  G
Sbjct: 275 YGWGRGEHGRLGFGDSDKSSKMVPQ---------KVQLLAGED----------IVQVSCG 315

Query: 286 GDHSIV 291
           G HS+ 
Sbjct: 316 GTHSVA 321



 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 137/338 (40%), Gaps = 89/338 (26%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKR------VKGLASVSVVQACA 56
           G WH LA++D G  + WGG+ +GQ G E   K     P R       +    + V Q  A
Sbjct: 103 GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKLVVRQVAA 162

Query: 57  GYSHCLVLTSTTGLW----------------------------------HSLALNDCGEV 82
           G +H +VLT    +W                                  H+LAL + G +
Sbjct: 163 GGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALQEDGTL 222

Query: 83  FTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKE 142
           + WG + +GQLG  + D + +S P RV+GL+ +++V   AG  H   LT  G        
Sbjct: 223 WAWGNNEYGQLG--TGDTQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEG-------- 272

Query: 143 NGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTK-PQRVE 201
                                         E+Y WG  E+G++G  +S+ +    PQ+V+
Sbjct: 273 ------------------------------EVYGWGRGEHGRLGFGDSDKSSKMVPQKVQ 302

Query: 202 SLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPV 261
            L    I  ++CG  HS  L++    +++FG G   +L   + V        G  +  P+
Sbjct: 303 LLAGEDIVQVSCGGTHSVALTRD-GHMFSFGRGDHGRLGYGRKV------TTGQPMEVPI 355

Query: 262 AMTAGED-SLVSHSGGLVVKKIYSGGDHSIVTVTKSSD 298
            +   +D S  +  G  + K +  GG H++  V   S+
Sbjct: 356 DLPPPQDPSGTATEGHWIAKLVACGGRHTLAIVEWKSN 393


>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
          Length = 395

 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 141/302 (46%), Gaps = 50/302 (16%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +SLA+   G +FTWG +  G LG    + K++S P  V  LA VS+VQA           
Sbjct: 55  NSLAICADGRLFTWGWNQRGTLG-HPPETKTESSPAPVDALAGVSIVQAA---------- 103

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKS------QSIPKRVKGLASVSVVQ 119
              G WH LA++D G  + WGG+ +GQ G E+  K+       + IP        + V Q
Sbjct: 104 --IGGWHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQGCAPKLKVRQ 161

Query: 120 ACAGYSHCLVLTSSGVVTCTHKENGCG-----SDP--SQGVQS-NLVQDSHTTITSLNSP 171
             AG +H +VLT  G V    +    G     S P   QG+++  ++        +L   
Sbjct: 162 VAAGGTHSVVLTQDGHVWTWGQPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTED 221

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G L+ WGNNEYGQ+G  ++    ++P RVE L +L +  IA G  HS  L+K    +YA+
Sbjct: 222 GILWAWGNNEYGQLGTGDTQPR-SQPIRVEGLSDLSLVDIAAGGWHSTALTKE-GEVYAW 279

Query: 232 GIGSAVQL--DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHS 289
           G G   +L     KS H  PQ +          + AGED          + ++  GG HS
Sbjct: 280 GRGEHGRLGFGDDKSSHMVPQKVE---------LLAGED----------IIQVSCGGTHS 320

Query: 290 IV 291
           + 
Sbjct: 321 VA 322



 Score =  104 bits (260), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 139/332 (41%), Gaps = 87/332 (26%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKS------QSIPKRVKGLASVSVVQACA 56
           G WH LA++D G  + WGG+ +GQ G E+  K+       + IP        + V Q  A
Sbjct: 105 GGWHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQGCAPKLKVRQVAA 164

Query: 57  GYSHCLVLTSTTGLW----------------------------------HSLALNDCGEV 82
           G +H +VLT    +W                                  H+LAL + G +
Sbjct: 165 GGTHSVVLTQDGHVWTWGQPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTEDGIL 224

Query: 83  FTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKE 142
           + WG + +GQLG  + D + +S P RV+GL+ +S+V   AG  H   LT         KE
Sbjct: 225 WAWGNNEYGQLG--TGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALT---------KE 273

Query: 143 NGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVES 202
                                        GE+Y WG  E+G++G  +  ++   PQ+VE 
Sbjct: 274 -----------------------------GEVYAWGRGEHGRLGFGDDKSSHMVPQKVEL 304

Query: 203 LVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVA 262
           L    I  ++CG  HS  L++   R++++G G   +L   + V  T   +  P I  P  
Sbjct: 305 LAGEDIIQVSCGGTHSVALTRD-GRMFSYGRGDHGRLGYGRKV-TTGHPMEVP-IDLPPP 361

Query: 263 MTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
            T+G DS     G    + +  GG H++   T
Sbjct: 362 GTSGGDS----GGQWQARYVACGGRHTLAIAT 389


>gi|296486689|tpg|DAA28802.1| TPA: hect domain and RLD 5 [Bos taurus]
          Length = 963

 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 164/396 (41%), Gaps = 93/396 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG +  GQLG+      S S P+ V+ L+ V +VQ  AG +   
Sbjct: 160 GDYHSLALSKGGELFAWGQNLDGQLGVGRIF-ASTSTPEIVENLSGVPLVQISAGEA--- 215

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL+  G V++WG +  GQLGL     K    P  ++ L    V     
Sbjct: 216 ---------HSMALSMSGNVYSWGRNDCGQLGLGHTYNKES--PSCIEALDDQKVEFLAC 264

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H  +LT SG+V                                      +T+G+ +Y
Sbjct: 265 GGCHTALLTKSGLV--------------------------------------FTFGDGKY 286

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS     +P+ V  LV   +  IACG  H+        ++++FG G   QL + 
Sbjct: 287 GQLG-HNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNG 345

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKI--YSGGDHSIVTVTKSSDGV 300
            + +   QLI       P  M       +       VK++   +GG+ SI+   +  +  
Sbjct: 346 GTRN---QLI-------PRPMKLLSSEELKSESSTSVKELIMVAGGNQSILIWMEKENSY 395

Query: 301 --LSDDFRVLNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGC 355
             L      LN  T    I DV  +R +  +RE+ +                 +F SP C
Sbjct: 396 VNLRRKIPTLNEGTVKRWIADVGTKRWQNTKREIRE-----------------IFSSPAC 438

Query: 356 MNGSFLQVENDE-----HFSCNSKKFSFIKLSLINW 386
           + GSFL+   D      H   N+ + +F +L+  +W
Sbjct: 439 LTGSFLRERIDGKMISIHLDLNTARNTFKELTQKDW 474



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 62/95 (65%), Gaps = 1/95 (1%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y EE   +WF      ++   F  G LCGL+++N  + ++PFPLAL+KK+LD+  
Sbjct: 681 YGMFTYPEEASYMWFPVRPKFEKKSYFFFGLLCGLSLFNCNVADIPFPLALFKKLLDQTP 740

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L +SLQ +LD    DLE+VF I F
Sbjct: 741 SLEDLKELSPVLGESLQTLLDDDGDDLEEVFHIHF 775



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 12/99 (12%)

Query: 991  VSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLML 1050
            V R +++ED   +L Q+   D ++ L V+            F GE   + GGVR EF   
Sbjct: 624  VRRSHLIEDVFSQLNQFENEDLRRELMVS------------FSGEIGYNFGGVRAEFFYC 671

Query: 1051 LLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            L +E+  P+YGMF   EE   +WF      ++  YF  G
Sbjct: 672  LFQEMTRPEYGMFTYPEEASYMWFPVRPKFEKKSYFFFG 710



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 17/143 (11%)

Query: 106 PKRVKGLASVSVVQACAGYSHCLVLTSSGV-----VTCTHKENGCGSDPSQGVQSNLVQ- 159
           PK +K    + +     G  H LVL+S G       +  H    C        + N++Q 
Sbjct: 103 PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYSIEHARFQCILQ-----EKNIIQI 157

Query: 160 ---DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN 216
              D H+   +L+  GEL+ WG N  GQ+G+     + + P+ VE+L  +P+  I+ G  
Sbjct: 158 TCGDYHSL--ALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEA 215

Query: 217 HSFVLSKSVSRLYAFGIGSAVQL 239
           HS  LS S   +Y++G     QL
Sbjct: 216 HSMALSMS-GNVYSWGRNDCGQL 237


>gi|156120637|ref|NP_001095465.1| E3 ISG15--protein ligase HERC5 [Bos taurus]
 gi|151555709|gb|AAI49082.1| HERC5 protein [Bos taurus]
          Length = 958

 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 164/396 (41%), Gaps = 93/396 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG +  GQLG+      S S P+ V+ L+ V +VQ  AG +   
Sbjct: 155 GDYHSLALSKGGELFAWGQNLDGQLGVGRIF-ASTSTPEIVENLSGVPLVQISAGEA--- 210

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL+  G V++WG +  GQLGL     K    P  ++ L    V     
Sbjct: 211 ---------HSMALSMSGNVYSWGRNDCGQLGLGHTYNKES--PSCIEALDDQKVEFLAC 259

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H  +LT SG+V                                      +T+G+ +Y
Sbjct: 260 GGCHTALLTKSGLV--------------------------------------FTFGDGKY 281

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS     +P+ V  LV   +  IACG  H+        ++++FG G   QL + 
Sbjct: 282 GQLG-HNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNG 340

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKI--YSGGDHSIVTVTKSSDGV 300
            + +   QLI       P  M       +       VK++   +GG+ SI+   +  +  
Sbjct: 341 GTRN---QLI-------PRPMKLLSSEELKSESSTSVKELIMVAGGNQSILIWMEKENSY 390

Query: 301 --LSDDFRVLNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGC 355
             L      LN  T    I DV  +R +  +RE+ +                 +F SP C
Sbjct: 391 VNLRRKIPTLNEGTVKRWIADVGTKRWQNTKREIRE-----------------IFSSPAC 433

Query: 356 MNGSFLQVENDE-----HFSCNSKKFSFIKLSLINW 386
           + GSFL+   D      H   N+ + +F +L+  +W
Sbjct: 434 LTGSFLRERIDGKMISIHLDLNTARNTFKELTQKDW 469



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 62/95 (65%), Gaps = 1/95 (1%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y EE   +WF      ++   F  G LCGL+++N  + ++PFPLAL+KK+LD+  
Sbjct: 676 YGMFTYPEEASYMWFPVRPKFEKKSYFFFGLLCGLSLFNCNVADIPFPLALFKKLLDQTP 735

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L +SLQ +LD    DLE+VF I F
Sbjct: 736 SLEDLKELSPVLGESLQTLLDDDGDDLEEVFHIHF 770



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 12/99 (12%)

Query: 991  VSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLML 1050
            V R +++ED   +L Q+   D ++ L             V F GE   + GGVR EF   
Sbjct: 619  VRRSHLIEDVFSQLNQFENEDLRREL------------MVSFSGEIGYNFGGVRAEFFYC 666

Query: 1051 LLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            L +E+  P+YGMF   EE   +WF      ++  YF  G
Sbjct: 667  LFQEMTRPEYGMFTYPEEASYMWFPVRPKFEKKSYFFFG 705



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 17/143 (11%)

Query: 106 PKRVKGLASVSVVQACAGYSHCLVLTSSGV-----VTCTHKENGCGSDPSQGVQSNLVQ- 159
           PK +K    + +     G  H LVL+S G       +  H    C        + N++Q 
Sbjct: 98  PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYSIEHARFQCILQ-----EKNIIQI 152

Query: 160 ---DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN 216
              D H+   +L+  GEL+ WG N  GQ+G+     + + P+ VE+L  +P+  I+ G  
Sbjct: 153 TCGDYHSL--ALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEA 210

Query: 217 HSFVLSKSVSRLYAFGIGSAVQL 239
           HS  LS S   +Y++G     QL
Sbjct: 211 HSMALSMS-GNVYSWGRNDCGQL 232


>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 389

 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 127/269 (47%), Gaps = 36/269 (13%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +SLA+ D G +FTWG +  G LG    + K++S P  V+ LA V +VQA           
Sbjct: 52  NSLAICDDGRLFTWGWNQRGTLG-HPPETKTESSPAPVEALAGVKIVQAA---------- 100

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKS------QSIPKRVKGLASVSVVQ 119
              G WH LA++D G  + WGG+ +GQ G E   K+       + IP   +    + V Q
Sbjct: 101 --IGGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCALKLKVQQ 158

Query: 120 ACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTIT---------SLNS 170
             AG +H +VLT  G V  T  +     D  Q      VQ     +          +L+ 
Sbjct: 159 VAAGGTHSVVLTQEGHV-WTWGQPWPPGDIKQISTPVRVQGLEKVMMIAVGAFHNLALSE 217

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
              L+ WGNNEYGQ+GI ++    ++P RVE L  L +  IA G  HS  L+K    +YA
Sbjct: 218 DAVLWAWGNNEYGQLGIGDTQPR-SQPIRVEGLSGLSLVDIAAGGWHSTALTKD-GEVYA 275

Query: 231 FGIGSAVQL--DSPKSVHKTP---QLIHG 254
           +G G   +L     KS H  P   QL+ G
Sbjct: 276 WGRGEHGRLGFGDDKSSHMVPLKVQLLDG 304



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 134/332 (40%), Gaps = 88/332 (26%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKS------QSIPKRVKGLASVSVVQACA 56
           G WH LA++D G  + WGG+ +GQ G E   K+       + IP   +    + V Q  A
Sbjct: 102 GGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCALKLKVQQVAA 161

Query: 57  GYSHCLVLTSTTGLW----------------------------------HSLALNDCGEV 82
           G +H +VLT    +W                                  H+LAL++   +
Sbjct: 162 GGTHSVVLTQEGHVWTWGQPWPPGDIKQISTPVRVQGLEKVMMIAVGAFHNLALSEDAVL 221

Query: 83  FTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKE 142
           + WG + +GQLG+   D + +S P RV+GL+ +S+V   AG  H   LT           
Sbjct: 222 WAWGNNEYGQLGI--GDTQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKD--------- 270

Query: 143 NGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVES 202
                                        GE+Y WG  E+G++G  +  ++   P +V+ 
Sbjct: 271 -----------------------------GEVYAWGRGEHGRLGFGDDKSSHMVPLKVQL 301

Query: 203 LVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVA 262
           L    I  ++CG  HS  L+ S  R++++G G   +L   + V  T   +  P    P  
Sbjct: 302 LDGEDIVQVSCGGTHSVALT-SDGRIFSYGRGDHGRLGYGRKV-TTGHPMEVPLNLPPPK 359

Query: 263 MTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
            +AG D L           +  GG H++  VT
Sbjct: 360 TSAGPDGLWQ------ANFVACGGRHTLAIVT 385



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 93/244 (38%), Gaps = 69/244 (28%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           V  WG    GQLG+   D+K  +   RV  L   +V    AG  +            SLA
Sbjct: 10  VLAWGSGEDGQLGMGGCDEKDWA--HRVAALDPYAVSAVVAGSRN------------SLA 55

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           + D G +FTWG +  G LG    + K++S P  V+ LA V +VQA  G  HCL       
Sbjct: 56  ICDDGRLFTWGWNQRGTLG-HPPETKTESSPAPVEALAGVKIVQAAIGGWHCL------- 107

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT-- 193
                                          +++  G  Y WG NEYGQ G         
Sbjct: 108 -------------------------------AVDDKGRAYAWGGNEYGQCGEEPERKEDG 136

Query: 194 -------VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG----IGSAVQLDSP 242
                  +  PQR    + L +  +A G  HS VL++    ++ +G     G   Q+ +P
Sbjct: 137 TRALRRDIPTPQRC--ALKLKVQQVAAGGTHSVVLTQE-GHVWTWGQPWPPGDIKQISTP 193

Query: 243 KSVH 246
             V 
Sbjct: 194 VRVQ 197


>gi|268569112|ref|XP_002640436.1| Hypothetical protein CBG08488 [Caenorhabditis briggsae]
          Length = 985

 Score =  110 bits (276), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 141/294 (47%), Gaps = 62/294 (21%)

Query: 793  SLQDILDYREPDLEDVFGI------TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVV 846
            +L  I     P +E ++ +      T  NW+  +S  +F R ++++K+ +  +L+     
Sbjct: 468  TLDTIFKVHTPFIEALYSVSESMQKTLGNWWSKLSTRHFRRQVIVYKRAVETILR----- 522

Query: 847  DSTNGDITFNRKLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTA 906
             +  G    ++   F L  LQ+L  +N                            V    
Sbjct: 523  -AGKGP---SKARQFLL-TLQRLFLINQNF-----------------------HIVPLET 554

Query: 907  FYMPDLATVCDIRIDYFRWISGR-PNGSTRDFLCNYPFIFDAKAKTTLLEMD----QRIQ 961
            FY+ DL  + +I+++Y+  ++ + P     D+  +YPF+ +  AK  +L ++    Q + 
Sbjct: 555  FYIEDLGQIHNIKLEYYNMVTKQQPFKDESDYWTHYPFLLNGAAKGEVLFVEAGLIQAVN 614

Query: 962  MEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDT 1021
             + AM  +   +   T       Q+ ++ V RD IV DT+ +LA ++  D +KPLKV   
Sbjct: 615  AQSAMIASGGLIEGVTM------QHCDLTVRRDFIVSDTMHKLAGFSEIDVRKPLKVT-- 666

Query: 1022 SPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFS 1075
                        GEEA+DAGGVR+EF ++++++IL P+YGMF E EE+R +WFS
Sbjct: 667  ----------IVGEEADDAGGVRKEFFLIVMRKILQPEYGMFTENEESRLVWFS 710



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 135/301 (44%), Gaps = 42/301 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++ L    ++++ G +  GQLG     + S SI   V   + V +VQ  AG +H  
Sbjct: 18  GEQHTIFLTKDRKMWSVGSNVDGQLGRGKRSEGSFSIYP-VSLTSGVGIVQIAAGRAH-- 74

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     SLA+ D G VF WG + HGQLG+E+     Q +PKR+  L    VVQ  +
Sbjct: 75  ----------SLAVADDGRVFAWGSNEHGQLGMENT-ITWQEMPKRINQLN--EVVQVAS 121

Query: 123 GYSHCLVLTSSGVVTC--THKENGCGSDPSQGVQSNL-----VQDSHTTITSLNSPGELY 175
           G  HC+ LT  G V       +  C   P      N      V+       ++++ G ++
Sbjct: 122 GSDHCIALTEDGRVYVWGEQADGRCIHHPELVEHLNAIPIVRVEAGARHCVAISASGAVF 181

Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
           TWG N  G++G+++     T    V  +  L +   ACG NH+ +L+    R ++FG  +
Sbjct: 182 TWGQNNSGELGMDDFRPQ-TSVHHVTQMDGLGVVEAACGDNHTILLTH-CGRTFSFGSDA 239

Query: 236 AVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTK 295
             Q    K + K P         +P A++   D + SH     V +I +G  H+I  +  
Sbjct: 240 LGQCGFGKKLEKRP---------NPTAVS---DLIGSH-----VTRIAAGACHTIAIIRG 282

Query: 296 S 296
           S
Sbjct: 283 S 283



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/97 (50%), Positives = 64/97 (65%), Gaps = 3/97 (3%)

Query: 720 YGI-TEYEETRSIWFS--EDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDE 776
           YG+ TE EE+R +WFS     F ++     +G L GLA+YN  I+  PFPLALYK +LD 
Sbjct: 695 YGMFTENEESRLVWFSGMPAEFCEREQFRQLGRLVGLAVYNNVIVPFPFPLALYKYLLDI 754

Query: 777 PILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
              L+DL +LSPT  + LQ +LDY E D+EDVF +TF
Sbjct: 755 EPTLEDLCELSPTEGRGLQSLLDYEEDDVEDVFSLTF 791


>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 396

 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 143/304 (47%), Gaps = 54/304 (17%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +SLA+ D G++FTWG +  G LG    + K++S P  VK LASV +VQA           
Sbjct: 49  NSLAICDDGKLFTWGWNQRGTLG-HPPETKTESTPSLVKSLASVKIVQAA---------- 97

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLE-SADKKSQS------IPKRVKGLASVSVV 118
              G WH LA++D G  + WGG+ +GQ G E S D+  +       IPKR      ++V 
Sbjct: 98  --IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCA--PQLTVR 153

Query: 119 QACAGYSHCLVLTSSGVVTCTHKENGCGSDPS-------QGVQS-NLVQDSHTTITSLNS 170
           Q  AG +H +VLT  G V    +    G           QG+++  L+        +L  
Sbjct: 154 QVAAGGTHSVVLTREGYVWTWGQPWPPGDIKQISIPVRVQGLENVRLIAVGAFHNLALKE 213

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
            G L+ WGNNEYGQ+G  ++    + P  V+ L +L +  IA G  HS  L+     +Y 
Sbjct: 214 DGTLWAWGNNEYGQLGTGDTQPR-SFPIPVQGLDDLTLVDIAAGGWHSTALTNE-GEVYG 271

Query: 231 FGIGSAVQL---DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGD 287
           +G G   +L   D+ KS    PQ ++         + AGED          + ++  GG 
Sbjct: 272 WGRGEHGRLGFGDNDKSSKMLPQKVN---------LLAGED----------IIQVSCGGT 312

Query: 288 HSIV 291
           HS+ 
Sbjct: 313 HSVA 316



 Score = 99.8 bits (247), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 138/336 (41%), Gaps = 93/336 (27%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLE-SADKKSQS------IPKRVKGLASVSVVQAC 55
           G WH LA++D G  + WGG+ +GQ G E S D+  +       IPKR      ++V Q  
Sbjct: 99  GGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCA--PQLTVRQVA 156

Query: 56  AGYSHCLVLTSTTGLW----------------------------------HSLALNDCGE 81
           AG +H +VLT    +W                                  H+LAL + G 
Sbjct: 157 AGGTHSVVLTREGYVWTWGQPWPPGDIKQISIPVRVQGLENVRLIAVGAFHNLALKEDGT 216

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHK 141
           ++ WG + +GQLG  + D + +S P  V+GL  +++V   AG  H               
Sbjct: 217 LWAWGNNEYGQLG--TGDTQPRSFPIPVQGLDDLTLVDIAAGGWHS-------------- 260

Query: 142 ENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGI-NNSNTTVTKPQRV 200
                                   T+L + GE+Y WG  E+G++G  +N  ++   PQ+V
Sbjct: 261 ------------------------TALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKV 296

Query: 201 ESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQL---IHGPWI 257
             L    I  ++CG  HS  L++   R+++FG G   +L   + V     L   I  P +
Sbjct: 297 NLLAGEDIIQVSCGGTHSVALTRD-GRIFSFGRGDHGRLGYGRKVTTGQPLELPIDIPPL 355

Query: 258 ASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTV 293
                 T  ED      G  + K +  GG H++  V
Sbjct: 356 EGRFNHTDEED-----DGKWIAKHVACGGRHTLAIV 386



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 91/214 (42%), Gaps = 59/214 (27%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           V  WG    GQLGL + ++K  +           SVV+A   ++   V +   G  +SLA
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELA-----------SVVEALEPFN---VRSVVGGSRNSLA 52

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           + D G++FTWG +  G LG    + K++S P  VK LASV +VQA  G  HCL       
Sbjct: 53  ICDDGKLFTWGWNQRGTLG-HPPETKTESTPSLVKSLASVKIVQAAIGGWHCL------- 104

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                                          +++  G  Y WG NEYGQ G   S     
Sbjct: 105 -------------------------------AVDDQGRAYAWGGNEYGQCGEEPSKDETG 133

Query: 196 KPQRVESLV------NLPIALIACGANHSFVLSK 223
           +P R + ++       L +  +A G  HS VL++
Sbjct: 134 RPVRRDIVIPKRCAPQLTVRQVAAGGTHSVVLTR 167


>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
 gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
 gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
          Length = 393

 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 88/271 (32%), Positives = 132/271 (48%), Gaps = 35/271 (12%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           ++G  +SLA+ D G +FTWG +  G LG +  + K+++IP RVK LA+V + QA      
Sbjct: 44  VSGSRNSLAICDDGTMFTWGWNQRGTLGHQP-ETKTENIPSRVKALANVKITQAA----- 97

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD-------KKSQSIPKRVKGLA 113
                   G WH LA++D G  + WGG+ +GQ G E          ++   IPKR     
Sbjct: 98  -------IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRC--AP 148

Query: 114 SVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPS-------QGVQS-NLVQDSHTTI 165
            ++V Q  AG +H +VLT  G V    +    G           QG+++  L+       
Sbjct: 149 KLTVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHN 208

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L   G L  WGNNEYGQ+G  ++  T + P  V+ L +L +  IA G  HS  L+   
Sbjct: 209 LALEEDGRLLAWGNNEYGQLGTGDTQPT-SHPVPVQGLDDLTLVDIAAGGWHSTALTDK- 266

Query: 226 SRLYAFGIGSAVQL---DSPKSVHKTPQLIH 253
             +Y +G G   +L   D+ KS    PQ ++
Sbjct: 267 GEVYGWGRGEHGRLGLGDNDKSSKMVPQKVN 297



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 137/340 (40%), Gaps = 87/340 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESAD-------KKSQSIPKRVKGLASVSVVQAC 55
           G WH LA++D G  + WGG+ +GQ G E          ++   IPKR      ++V Q  
Sbjct: 99  GGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRC--APKLTVRQVA 156

Query: 56  AGYSHCLVLTSTTGLW----------------------------------HSLALNDCGE 81
           AG +H +VLT    +W                                  H+LAL + G 
Sbjct: 157 AGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGR 216

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHK 141
           +  WG + +GQLG  + D +  S P  V+GL  +++V   AG  H               
Sbjct: 217 LLAWGNNEYGQLG--TGDTQPTSHPVPVQGLDDLTLVDIAAGGWHS-------------- 260

Query: 142 ENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGI-NNSNTTVTKPQRV 200
                                   T+L   GE+Y WG  E+G++G+ +N  ++   PQ+V
Sbjct: 261 ------------------------TALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKV 296

Query: 201 ESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASP 260
             L    I  ++CG  HS  L++   R+++FG G   +L   + V  T Q +  P I  P
Sbjct: 297 NLLAEEDIIQVSCGGTHSVALTRD-GRIFSFGRGDHGRLGYGRKV-TTGQPLELP-IKIP 353

Query: 261 VAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV 300
               +   +     G    K I  GG H++  V   SD +
Sbjct: 354 PPEGSFNHTDEEEEGKWSAKSIACGGRHTLAIVEWKSDDI 393


>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
 gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
          Length = 994

 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 129/259 (49%), Gaps = 34/259 (13%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H +AL + G +F+WG + +GQLG+E  +  +++   R++ +   ++VQ   G +H L L 
Sbjct: 123 HCVALTNDGHLFSWGSNVYGQLGVERMNVVAKARYPRIQEINLANIVQIACGSNHSLALE 182

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           ST G+ H+  LND           HGQLG+    ++S   P  V  L  + + Q  AG S
Sbjct: 183 STDGVLHAWGLND-----------HGQLGI--GTRESFIGPTTVNKLMGIPICQLAAGAS 229

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTI----------------TSLN 169
           H LVLT SG V    K N  G    Q  Q +++  S   +                 ++ 
Sbjct: 230 HSLVLTPSGTVFGWGK-NMFGQ-IGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVT 287

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           + G L+T+G   YGQ+G  N N+ +  P++V  L+   +  +ACG  H+  +++  ++LY
Sbjct: 288 ATGGLFTFGAGTYGQLGHGNQNSELF-PKQVMELMGSVVLDVACGRCHTLAITE--NKLY 344

Query: 230 AFGIGSAVQLDSPKSVHKT 248
           AFG+ ++ QL      H T
Sbjct: 345 AFGLNTSGQLGLLNVKHTT 363



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 50/102 (49%), Positives = 69/102 (67%), Gaps = 4/102 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+      EYEE+R  WF+   FE+      +G LCG+ IYN  I  +PFPLALYKK
Sbjct: 737 PKYGM----FVEYEESRYTWFAHYNFEEPQTYEYVGILCGMTIYNNVIAALPFPLALYKK 792

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
           +L+EP+ L+DLK+LSPT  + L+++LDY + D E VFG+ F+
Sbjct: 793 LLNEPVTLEDLKELSPTEGRCLEEMLDYDDDDFESVFGVNFQ 834



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 123/281 (43%), Gaps = 54/281 (19%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLA-SVSVVQACAGYSHC 61
           G  HS+ L D G VF+ G +   QLG +   +K    P   + L   + V Q+  G    
Sbjct: 60  GRHHSVMLLDDGSVFSCGNNDFYQLGHDGIKRK----PNLYENLHWYIDVKQSFVGIH-- 113

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
            V++   G  H +AL + G +F+WG + +GQLG+E  +  +++   R++ +   ++VQ  
Sbjct: 114 -VISVACGDAHCVALTNDGHLFSWGSNVYGQLGVERMNVVAKARYPRIQEINLANIVQIA 172

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G +H L L S                                     + G L+ WG N+
Sbjct: 173 CGSNHSLALES-------------------------------------TDGVLHAWGLND 195

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           +GQ+GI    + +  P  V  L+ +PI  +A GA+HS VL+ S +    FG G  +    
Sbjct: 196 HGQLGIGTRESFIG-PTTVNKLMGIPICQLAAGASHSLVLTPSGT---VFGWGKNMFGQI 251

Query: 242 PKSVHKT---PQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
            ++  +    P L+        + +  GED    V+ +GGL
Sbjct: 252 GQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGL 292



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 44/60 (73%)

Query: 1030 VKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            V+F GE+A+D GG+++EF ML+ +E+ +PKYGMF EYEE+R  WF+   FE+   Y  +G
Sbjct: 709  VQFVGEDADDLGGLKKEFFMLIFQELFNPKYGMFVEYEESRYTWFAHYNFEEPQTYEYVG 768



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 84/202 (41%), Gaps = 25/202 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HSL L   G VF WG +  GQ+G    +++    P  VK L +  V++   G    
Sbjct: 226 AGASHSLVLTPSGTVFGWGKNMFGQIG--QNEQRDILYPSLVKLLRTQKVIRLACGEDFS 283

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + +T+T GL            FT+G  T+GQLG    ++ S+  PK+V  L    V+   
Sbjct: 284 VAVTATGGL------------FTFGAGTYGQLG--HGNQNSELFPKQVMELMGSVVLDVA 329

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G  H L +T + +       +G         Q  L+   HTT   L  P E     N +
Sbjct: 330 CGRCHTLAITENKLYAFGLNTSG---------QLGLLNVKHTTSIPLPIPIEKQPRKNGD 380

Query: 182 YGQMGINNSNTTVTKPQRVESL 203
               G N + T  + P +  SL
Sbjct: 381 DDGGGDNKAITVPSFPVKHLSL 402


>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
          Length = 393

 Score =  110 bits (274), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 145/309 (46%), Gaps = 54/309 (17%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           ++G  +SLA+ D G +FTWG +  G LG    + K+++IP +VK LA+V +VQA      
Sbjct: 44  VSGSRNSLAICDDGTLFTWGWNQRGTLG-HPPETKTENIPSQVKALANVKIVQAA----- 97

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS-------IPKRVKGLA 113
                   G WH LA++D G  + WGG+ +GQ G E    + +        IPKR     
Sbjct: 98  -------IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCA--P 148

Query: 114 SVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPS-------QGVQS-NLVQDSHTTI 165
            + V Q  AG +H +VLT  G V    +    G           QG+++  L+       
Sbjct: 149 KLVVRQVAAGGTHSVVLTREGHVWSWGQPWPPGDIKQISIPVRVQGLENVRLIAVGAFHN 208

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L   G L+ WGNNEYGQ+G  ++    ++P  V+ L +L +  IA G  HS  L+   
Sbjct: 209 LALEENGTLWAWGNNEYGQLGTGDTQPR-SQPIPVQGLDSLTLVDIAAGGWHSTALTDK- 266

Query: 226 SRLYAFGIGSAVQL---DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKI 282
             +Y +G G   +L   D+ KS    PQ ++         + AGED          + ++
Sbjct: 267 GEVYGWGRGEHGRLGFGDNDKSSKMLPQKVN---------LLAGED----------IIQV 307

Query: 283 YSGGDHSIV 291
             GG HS+ 
Sbjct: 308 SCGGTHSVA 316



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 136/337 (40%), Gaps = 87/337 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS-------IPKRVKGLASVSVVQAC 55
           G WH LA++D G  + WGG+ +GQ G E    + +        IPKR      + V Q  
Sbjct: 99  GGWHCLAVDDQGRAYAWGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCA--PKLVVRQVA 156

Query: 56  AGYSHCLVLTSTTGLW----------------------------------HSLALNDCGE 81
           AG +H +VLT    +W                                  H+LAL + G 
Sbjct: 157 AGGTHSVVLTREGHVWSWGQPWPPGDIKQISIPVRVQGLENVRLIAVGAFHNLALEENGT 216

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHK 141
           ++ WG + +GQLG      +SQ IP  V+GL S+++V   AG  H               
Sbjct: 217 LWAWGNNEYGQLGTGDTQPRSQPIP--VQGLDSLTLVDIAAGGWHS-------------- 260

Query: 142 ENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGI-NNSNTTVTKPQRV 200
                                   T+L   GE+Y WG  E+G++G  +N  ++   PQ+V
Sbjct: 261 ------------------------TALTDKGEVYGWGRGEHGRLGFGDNDKSSKMLPQKV 296

Query: 201 ESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASP 260
             L    I  ++CG  HS  L++   R+++FG G   +L   + V  T Q +  P +  P
Sbjct: 297 NLLAGEDIIQVSCGGTHSVALTRD-GRIFSFGRGDHGRLGCGRKV-TTGQPLDVP-VKIP 353

Query: 261 VAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSS 297
                  D+     G  V K +  GG H++  V   S
Sbjct: 354 PPEGQFNDAAEDDDGKWVAKVVACGGRHTLAIVEWKS 390



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 97/223 (43%), Gaps = 60/223 (26%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           V  WG    GQLGL + D+K             V VV+A   Y+   V +  +G  +SLA
Sbjct: 7   VIAWGSGEDGQLGLGTNDEKEW-----------VCVVEALEPYA---VRSVVSGSRNSLA 52

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           + D G +FTWG +  G LG    + K+++IP +VK LA+V +VQA  G  HCL       
Sbjct: 53  ICDDGTLFTWGWNQRGTLG-HPPETKTENIPSQVKALANVKIVQAAIGGWHCL------- 104

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                                          +++  G  Y WG NEYGQ G       + 
Sbjct: 105 -------------------------------AVDDQGRAYAWGGNEYGQCGEEPGKDEME 133

Query: 196 KPQRVESLV------NLPIALIACGANHSFVLSKSVSRLYAFG 232
           +P R + ++       L +  +A G  HS VL++    ++++G
Sbjct: 134 RPLRRDIVIPKRCAPKLVVRQVAAGGTHSVVLTRE-GHVWSWG 175


>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
 gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
 gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 396

 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 143/304 (47%), Gaps = 54/304 (17%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +SLA+ D G++FTWG +  G LG    + K++S P  VK LA+V +VQA           
Sbjct: 49  NSLAICDDGKLFTWGWNQRGTLG-HPPETKTESTPSLVKSLANVKIVQAA---------- 97

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLE-SADKKSQS------IPKRVKGLASVSVV 118
              G WH LA++D G  + WGG+ +GQ G E S D+  +       IPKR      ++V 
Sbjct: 98  --IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRC--AQQLTVR 153

Query: 119 QACAGYSHCLVLTSSGVVTCTHKENGCGSDPS-------QGVQS-NLVQDSHTTITSLNS 170
           Q  AG +H +VLT  G V    +    G           QG+++  L+        +L  
Sbjct: 154 QVAAGGTHSVVLTREGYVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKE 213

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
            G L+ WGNNEYGQ+G  ++    + P  V+ L +L +  IA G  HS  L+     +Y 
Sbjct: 214 DGTLWAWGNNEYGQLGTGDTQPR-SYPIPVQGLDDLTLVDIAAGGWHSTALTNE-GEVYG 271

Query: 231 FGIGSAVQL---DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGD 287
           +G G   +L   D+ KS    PQ ++         + AGED          + ++  GG 
Sbjct: 272 WGRGEHGRLGFGDNDKSSKMLPQKVN---------LLAGED----------IIQVSCGGT 312

Query: 288 HSIV 291
           HS+ 
Sbjct: 313 HSVA 316



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 137/336 (40%), Gaps = 93/336 (27%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLE-SADKKSQS------IPKRVKGLASVSVVQAC 55
           G WH LA++D G  + WGG+ +GQ G E S D+  +       IPKR      ++V Q  
Sbjct: 99  GGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRC--AQQLTVRQVA 156

Query: 56  AGYSHCLVLTSTTGLW----------------------------------HSLALNDCGE 81
           AG +H +VLT    +W                                  H+LAL + G 
Sbjct: 157 AGGTHSVVLTREGYVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGT 216

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHK 141
           ++ WG + +GQLG  + D + +S P  V+GL  +++V   AG  H   LT+ G       
Sbjct: 217 LWAWGNNEYGQLG--TGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEG------- 267

Query: 142 ENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGI-NNSNTTVTKPQRV 200
                                          E+Y WG  E+G++G  +N  ++   PQ+V
Sbjct: 268 -------------------------------EVYGWGRGEHGRLGFGDNDKSSKMLPQKV 296

Query: 201 ESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQL---IHGPWI 257
             L    I  ++CG  HS  L++   R+++FG G   +L   + V     L   IH P  
Sbjct: 297 NLLAGEDIIQVSCGGTHSVALTRD-GRIFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPP 355

Query: 258 ASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTV 293
                 T  ED      G  + K +  GG H++  V
Sbjct: 356 EGRFNHTDEED-----DGKWIAKHVACGGRHTLAIV 386



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 90/214 (42%), Gaps = 59/214 (27%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           V  WG    GQLGL + ++K  +           SVV A   ++   V +   G  +SLA
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELA-----------SVVDALEPFN---VRSVVGGSRNSLA 52

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           + D G++FTWG +  G LG    + K++S P  VK LA+V +VQA  G  HCL       
Sbjct: 53  ICDDGKLFTWGWNQRGTLG-HPPETKTESTPSLVKSLANVKIVQAAIGGWHCL------- 104

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                                          +++  G  Y WG NEYGQ G   S     
Sbjct: 105 -------------------------------AVDDQGRAYAWGGNEYGQCGEEPSKDETG 133

Query: 196 KPQRVESLV------NLPIALIACGANHSFVLSK 223
           +P R + ++       L +  +A G  HS VL++
Sbjct: 134 RPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTR 167


>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
          Length = 1024

 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 157/366 (42%), Gaps = 86/366 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG + HGQLG+      S + P+ V+ LA + + Q  AG +   
Sbjct: 146 GDYHSLALSKGGELFAWGQNLHGQLGV-GRKFPSTTAPQIVEHLAGIPLAQISAGEA--- 201

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL+  G +++WG +  GQLGL+  + K    P  ++ L +  V     
Sbjct: 202 ---------HSMALSMSGNIYSWGKNEFGQLGLDHTESKDS--PSLIEALDNQKVEFLAC 250

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH  +LT  G+                                      L+T+G  ++
Sbjct: 251 GGSHTALLTQDGL--------------------------------------LFTFGAGKH 272

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS     +P  V  L    +  IACG  H+      + ++++FG G   QL + 
Sbjct: 273 GQLG-HNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNG 331

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGED-SLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV- 300
            +  +         I  P+ +++ ED    SH+    +  I +G + SI+   K  +   
Sbjct: 332 GTRDQL--------IPLPMKVSSNEDLKFESHTSEKELIMI-AGENQSILLWIKKENSYV 382

Query: 301 -LSDDFRVLNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCM 356
            L      LN  T    I DV  +R +  +RE+++                 +F SP C+
Sbjct: 383 NLRRTILTLNEGTIKRWIADVETKRWQSTKREIQE-----------------IFSSPACL 425

Query: 357 NGSFLQ 362
           +GSFL+
Sbjct: 426 SGSFLR 431



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 62/96 (64%), Gaps = 1/96 (1%)

Query: 719 HYGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            YG+  Y E  S +WF      ++   F  G LCGL+++N ++ N+PFPLAL+KK+LD+ 
Sbjct: 741 EYGLFMYPEGASCMWFPVKPKFEKKRYFFFGVLCGLSLFNCSVANLPFPLALFKKLLDQM 800

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
             L+DLK+LSP L K+LQ ILD    + E+VF I F
Sbjct: 801 PSLEDLKELSPDLGKNLQTILDDEGDNFEEVFYIYF 836



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 117/288 (40%), Gaps = 38/288 (13%)

Query: 805  LEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQ 864
            + D   +    ++  + +  F +L+ +FK  +I  L      D  N +   N  +   L+
Sbjct: 519  MSDQSSLVLEEYWATLQESTFSKLVQMFKTAVICQL------DYWNENAEENGNVQALLE 572

Query: 865  VLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFR 924
            +L+KL+ +N                 ++   P    +V    + +     VC  R  +  
Sbjct: 573  MLKKLHRVNQ----------------MKCLLPESIFQVDELLYRLDFFVEVCR-RYLWKM 615

Query: 925  WISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFL---QTFNPH 981
             +    N        ++PFIF+  +K  LL  D  ++++   ++  F       +  +  
Sbjct: 616  TVDTLENVGCCVIFSHFPFIFNNLSKIKLLRTDTLVKIQGKKHKAYFRWAAVEEERESEF 675

Query: 982  TLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAG 1041
             L    ++ V R++++ED + +L+Q+   D +K L             V F GE   D G
Sbjct: 676  ALLPTFDLTVRRNHLIEDVLNQLSQFENEDLRKEL------------WVSFSGEIGYDLG 723

Query: 1042 GVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            GV+ EF   L +E+  P+YG+F   E    +WF      ++  YF  G
Sbjct: 724  GVKTEFFYCLFEEMTQPEYGLFMYPEGASCMWFPVKPKFEKKRYFFFG 771


>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
 gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
          Length = 392

 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 140/303 (46%), Gaps = 51/303 (16%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +SLA+ D G++FTWG +  G LG    + K+++IP +VK LA+V++VQA           
Sbjct: 49  NSLAICDDGKLFTWGWNQRGTLG-HPPETKTENIPSQVKALANVNIVQAA---------- 97

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKR------VKGLASVSVVQ 119
              G WH LA++D G  + WGG+ +GQ G E   K     P R       +  + + V Q
Sbjct: 98  --IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQ 155

Query: 120 ACAGYSHCLVLTSSGVVTCTHKENGCGSDPS-------QGVQS-NLVQDSHTTITSLNSP 171
             AG +H +VLT  G V    +    G           QG++   L+        +L   
Sbjct: 156 VAAGGTHSVVLTREGHVWSWGQPWPPGDIKQISVPVRVQGLERVRLIAVGAFHNLALQED 215

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G L+ WGNNEYGQ+G  ++    ++P  V+ L  L +  IA G  HS  L+     +Y +
Sbjct: 216 GTLWAWGNNEYGQLGTGDTQPR-SQPITVQGLSGLTLVDIAAGGWHSTALTDD-GEVYGW 273

Query: 232 GIGSAVQL---DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           G G   +L   D+ KS    PQ ++         +  GED          + ++  GG H
Sbjct: 274 GRGEHGRLGFGDNDKSSKMVPQRVN---------LLVGED----------IVQVSCGGTH 314

Query: 289 SIV 291
           S+ 
Sbjct: 315 SVA 317



 Score =  106 bits (264), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 137/333 (41%), Gaps = 89/333 (26%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKR------VKGLASVSVVQACA 56
           G WH LA++D G  + WGG+ +GQ G E   K     P R       +  + + V Q  A
Sbjct: 99  GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAA 158

Query: 57  GYSHCLVLTSTTGLW----------------------------------HSLALNDCGEV 82
           G +H +VLT    +W                                  H+LAL + G +
Sbjct: 159 GGTHSVVLTREGHVWSWGQPWPPGDIKQISVPVRVQGLERVRLIAVGAFHNLALQEDGTL 218

Query: 83  FTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKE 142
           + WG + +GQLG  + D + +S P  V+GL+ +++V   AG  H   LT  G        
Sbjct: 219 WAWGNNEYGQLG--TGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDG-------- 268

Query: 143 NGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGI-NNSNTTVTKPQRVE 201
                                         E+Y WG  E+G++G  +N  ++   PQRV 
Sbjct: 269 ------------------------------EVYGWGRGEHGRLGFGDNDKSSKMVPQRVN 298

Query: 202 SLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPW-IASP 260
            LV   I  ++CG  HS  L++   R+Y FG G   +L   + V  T Q +  P  I  P
Sbjct: 299 LLVGEDIVQVSCGGTHSVALTRD-GRMYTFGRGDHGRLGYGRKV-TTGQPMEVPIDIPPP 356

Query: 261 VAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTV 293
             +T   D     +G  + K + SGG H++  V
Sbjct: 357 KNLTDSGD-----AGRWIAKLVASGGRHTLAIV 384


>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 393

 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 131/271 (48%), Gaps = 35/271 (12%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           ++G  +SLA+ D G +FTWG +  G LG    + K+++IP RVK LA+V + QA      
Sbjct: 44  VSGSRNSLAICDDGTMFTWGWNQRGTLG-HPPETKTENIPSRVKALANVKITQAA----- 97

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD-------KKSQSIPKRVKGLA 113
                   G WH LA++D G  + WGG+ +GQ G E          ++   IPKR     
Sbjct: 98  -------IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCA--P 148

Query: 114 SVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPS-------QGVQS-NLVQDSHTTI 165
            ++V Q  AG +H +VLT  G V    +    G           QG+++ +++       
Sbjct: 149 KLTVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQIFVPVRVQGLENVSIIAVGAFHN 208

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L   G L  WGNNEYGQ+G  ++  T + P  V  L +L +  IA G  HS  L+   
Sbjct: 209 LALEEDGRLLAWGNNEYGQLGTGDTQPT-SHPVPVHGLDDLTLVDIAAGGWHSTALTDK- 266

Query: 226 SRLYAFGIGSAVQL---DSPKSVHKTPQLIH 253
             +Y +G G   +L   D+ KS    PQ ++
Sbjct: 267 GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 297



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 135/340 (39%), Gaps = 87/340 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESAD-------KKSQSIPKRVKGLASVSVVQAC 55
           G WH LA++D G  + WGG+ +GQ G E          ++   IPKR      ++V Q  
Sbjct: 99  GGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCA--PKLTVRQVA 156

Query: 56  AGYSHCLVLTSTTGLW----------------------------------HSLALNDCGE 81
           AG +H +VLT    +W                                  H+LAL + G 
Sbjct: 157 AGGTHSVVLTREGHVWTWGQPWPPGDIKQIFVPVRVQGLENVSIIAVGAFHNLALEEDGR 216

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHK 141
           +  WG + +GQLG  + D +  S P  V GL  +++V   AG  H               
Sbjct: 217 LLAWGNNEYGQLG--TGDTQPTSHPVPVHGLDDLTLVDIAAGGWHS-------------- 260

Query: 142 ENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGI-NNSNTTVTKPQRV 200
                                   T+L   GE+Y WG  E+G++G  +N  ++   PQ+V
Sbjct: 261 ------------------------TALTDKGEVYGWGRGEHGRLGFGDNDKSSKMVPQKV 296

Query: 201 ESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASP 260
             L    I  ++CG  HS  L++   R+++FG G   +L   + V  T Q +  P I  P
Sbjct: 297 NLLAEEDIIQVSCGGTHSVALTRD-GRIFSFGRGDHGRLGYGRKV-TTGQPLELP-IMIP 353

Query: 261 VAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV 300
               +   +     G    K I  GG H++  V   SD +
Sbjct: 354 PPEGSFNHADEEEEGKWSAKWIACGGRHTLAIVEWKSDDI 393


>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
          Length = 993

 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 175/442 (39%), Gaps = 107/442 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG + HGQLG+      S   P+ V+ L+ V +VQ  AG +   
Sbjct: 114 GDYHSLALSKGGELFAWGQNLHGQLGVGRL-FASIPTPQAVEHLSGVPLVQISAGKA--- 169

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL+  G V++WG +  GQLGL   D   +  P  ++ L +  V     
Sbjct: 170 ---------HSMALSMSGNVYSWGRNDLGQLGLGHTD--GEDFPSLIETLDNQQVEFLAC 218

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH  +LT+ G+V                                      +T+G  +Y
Sbjct: 219 GGSHTALLTTDGLV--------------------------------------FTFGAGKY 240

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS     +P+ V  L    +  IACG  H+      + ++++FG G   QL + 
Sbjct: 241 GQLG-HNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLGNG 299

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV-- 300
            +        H   I  P+ + + E+             + +GG+ S++   +  +    
Sbjct: 300 GT--------HNQLIPLPMKLPSNEELKFESRTSDKELVMIAGGNQSVLLWMEKKNPYVN 351

Query: 301 LSDDFRVLNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMN 357
           L      LN  T    I DV  ++ +  +RE+ +                 +F S  C+ 
Sbjct: 352 LRRKIPTLNEGTVKRWIADVGTKQWQNTKREIRE-----------------IFSSSACLT 394

Query: 358 GSFLQVENDE-----HFSCNSKKFSFIKLSLINWFMKLHFSIFGQGFGCVCPTVLGDCVP 412
           GSFL+          H   N  + +F +L+  +W               V  T L D + 
Sbjct: 395 GSFLREREAAETMLIHLDLNKARNAFKELTQKDWIA-----------NTVITTCLKDNLL 443

Query: 413 KSWLY-------LETVFLSPGC 427
           K+  +       LE  FL P C
Sbjct: 444 KNLPFHSPHQEALEIFFLLPEC 465



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 1/95 (1%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y EE   +WF      ++   F  G LCGL+++N+ + N+PFPLAL+KK+L++  
Sbjct: 711 YGMFTYPEEASYMWFPVRPKFEKKRYFFFGVLCGLSLFNFNVANIPFPLALFKKLLNQTP 770

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L KSLQ +LD    D  +VF I F
Sbjct: 771 SLEDLKELSPVLGKSLQTLLDDEGDDFGEVFYIYF 805



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 56/206 (27%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYL---FLQTFNPHTLNQYLEVEVSRDNI 996
            ++PFIF+  +K  LL  D  ++++    +    L     Q  +   L     + V R ++
Sbjct: 600  HFPFIFNILSKIKLLYADSLLKIQEKKFRACMQLAGLVEQGGSELALLPTFNLTVRRTHL 659

Query: 997  VEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEIL 1056
            +ED +  L+Q+   D ++ L V+            F GE   D+GGV+ EF   L +E+ 
Sbjct: 660  IEDVLSHLSQFENEDLRRELMVS------------FSGEIGHDSGGVKVEFFHCLFEEMT 707

Query: 1057 DPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEYEETRSIWFS 1116
             P+YGMF   EE   +WF                            +  ++E+ R     
Sbjct: 708  RPEYGMFTYPEEASYMWF---------------------------PVRPKFEKKR----- 735

Query: 1117 EDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                     YF  G LCGL+++N+ V
Sbjct: 736  ---------YFFFGVLCGLSLFNFNV 752



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 34/186 (18%)

Query: 123 GYSHCLVLTSSGV-----VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTW 177
           G  H L+L+S G       +  H    C       +Q     D H+   +L+  GEL+ W
Sbjct: 74  GAEHMLILSSDGKPFEYNYSIEHARFQCILQEKSIIQI-ACGDYHSL--ALSKGGELFAW 130

Query: 178 GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
           G N +GQ+G+     ++  PQ VE L  +P+  I+ G  HS  LS S   +Y++G     
Sbjct: 131 GQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGKAHSMALSMS-GNVYSWGRNDLG 189

Query: 238 QLDSPKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGLVVKKIYSGGDHSIVTVTK 295
           QL                     +  T GED  SL+       V+ +  GG H+ +  T 
Sbjct: 190 QLG--------------------LGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLTT- 228

Query: 296 SSDGVL 301
             DG++
Sbjct: 229 --DGLV 232


>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 393

 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 141/305 (46%), Gaps = 55/305 (18%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +SLA+ D G++FTWG +  G LG   A+ K+++IP +VK L +V++VQA           
Sbjct: 49  NSLAICDDGKLFTWGWNQRGTLG-HPAETKTENIPSQVKALNNVNIVQAA---------- 97

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS--------IPKRVKGLASVSV 117
              G WH LA++D G  + WGG+ +GQ G E   K            IP+R      + V
Sbjct: 98  --IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGKTLRRDIVIPQRC--APKLVV 153

Query: 118 VQACAGYSHCLVLTSSGVVTCTHKENGCGSDPS-------QGVQS-NLVQDSHTTITSLN 169
            Q  AG +H +VLT  G V    +    G           QG++   L+        +L 
Sbjct: 154 RQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEKVKLIAVGAFHNLALQ 213

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G L+ WGNNEYGQ+G  ++    ++P  V+ L  L +  IA G  HS  L+     +Y
Sbjct: 214 EDGTLWAWGNNEYGQLGTGDTQPR-SQPIPVQGLSGLTLVDIAAGGWHSTALTDD-GEVY 271

Query: 230 AFGIGSAVQL---DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
            +G G   +L   D+ KS    PQ ++         + AGED          + ++  GG
Sbjct: 272 GWGRGEHGRLGFGDNDKSSKMVPQKVN---------LLAGED----------IVQLSCGG 312

Query: 287 DHSIV 291
            HS+ 
Sbjct: 313 THSVA 317



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 134/339 (39%), Gaps = 90/339 (26%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS--------IPKRVKGLASVSVVQA 54
           G WH LA++D G  + WGG+ +GQ G E   K            IP+R      + V Q 
Sbjct: 99  GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGKTLRRDIVIPQRC--APKLVVRQV 156

Query: 55  CAGYSHCLVLTSTTGLW----------------------------------HSLALNDCG 80
            AG +H +VLT    +W                                  H+LAL + G
Sbjct: 157 AAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLEKVKLIAVGAFHNLALQEDG 216

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
            ++ WG + +GQLG      +SQ IP  V+GL+ +++V   AG  H   LT  G      
Sbjct: 217 TLWAWGNNEYGQLGTGDTQPRSQPIP--VQGLSGLTLVDIAAGGWHSTALTDDG------ 268

Query: 141 KENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGI-NNSNTTVTKPQR 199
                                           E+Y WG  E+G++G  +N  ++   PQ+
Sbjct: 269 --------------------------------EVYGWGRGEHGRLGFGDNDKSSKMVPQK 296

Query: 200 VESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIAS 259
           V  L    I  ++CG  HS  L++   R+++FG G   +L   K V  T Q +  P    
Sbjct: 297 VNLLAGEDIVQLSCGGTHSVALTQD-GRMFSFGRGDHGRLGYGKKV-TTGQPVEVPTDIP 354

Query: 260 PVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSD 298
           P    +G +    H    + K +  GG H++  V    D
Sbjct: 355 PPKSLSGTEEAEGH---WIAKLVACGGRHTLAIVEWKVD 390


>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
           [Ailuropoda melanoleuca]
          Length = 1035

 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 161/394 (40%), Gaps = 89/394 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG + HGQLG+      S   P+ V+ L+ V +VQ  AG +   
Sbjct: 157 GDYHSLALSKGGELFAWGQNLHGQLGVGRL-FASIPTPQAVEHLSGVPLVQISAGKA--- 212

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL+  G V++WG +  GQLGL   D   +  P  ++ L +  V     
Sbjct: 213 ---------HSMALSMSGNVYSWGRNDLGQLGLGHTD--GEDFPSLIETLDNQQVEFLAC 261

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH  +LT+ G+V                                      +T+G  +Y
Sbjct: 262 GGSHTALLTTDGLV--------------------------------------FTFGAGKY 283

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS     +P+ V  L    +  IACG  H+      + ++++FG G   QL + 
Sbjct: 284 GQLG-HNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLGNG 342

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV-- 300
            +        H   I  P+ + + E+             + +GG+ S++   +  +    
Sbjct: 343 GT--------HNQLIPLPMKLPSNEELKFESRTSDKELVMIAGGNQSVLLWMEKKNPYVN 394

Query: 301 LSDDFRVLNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMN 357
           L      LN  T    I DV  ++ +  +RE+ +                 +F S  C+ 
Sbjct: 395 LRRKIPTLNEGTVKRWIADVGTKQWQNTKREIRE-----------------IFSSSACLT 437

Query: 358 GSFLQVENDE-----HFSCNSKKFSFIKLSLINW 386
           GSFL+          H   N  + +F +L+  +W
Sbjct: 438 GSFLREREAAETMLIHLDLNKARNAFKELTQKDW 471



 Score = 86.7 bits (213), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 1/95 (1%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y EE   +WF      ++   F  G LCGL+++N+ + N+PFPLAL+KK+L++  
Sbjct: 753 YGMFTYPEEASYMWFPVRPKFEKKRYFFFGVLCGLSLFNFNVANIPFPLALFKKLLNQTP 812

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L KSLQ +LD    D  +VF I F
Sbjct: 813 SLEDLKELSPVLGKSLQTLLDDEGDDFGEVFYIYF 847



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 56/206 (27%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYL---FLQTFNPHTLNQYLEVEVSRDNI 996
            ++PFIF+  +K  LL  D  ++++    +    L     Q  +   L     + V R ++
Sbjct: 642  HFPFIFNILSKIKLLYADSLLKIQEKKFRACMQLAGLVEQGGSELALLPTFNLTVRRTHL 701

Query: 997  VEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEIL 1056
            +ED +  L+Q+   D ++ L V+            F GE   D+GGV+ EF   L +E+ 
Sbjct: 702  IEDVLSHLSQFENEDLRRELMVS------------FSGEIGHDSGGVKVEFFHCLFEEMT 749

Query: 1057 DPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEYEETRSIWFS 1116
             P+YGMF   EE   +WF                            +  ++E+ R     
Sbjct: 750  RPEYGMFTYPEEASYMWF---------------------------PVRPKFEKKR----- 777

Query: 1117 EDTFEDQNMYFLIGTLCGLAIYNYTV 1142
                     YF  G LCGL+++N+ V
Sbjct: 778  ---------YFFFGVLCGLSLFNFNV 794



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 34/203 (16%)

Query: 106 PKRVKGLASVSVVQACAGYSHCLVLTSSGV-----VTCTHKENGCGSDPSQGVQSNLVQD 160
           P  VK    + +     G  H L+L+S G       +  H    C       +Q     D
Sbjct: 100 PACVKLGKKMKIHSVDQGAEHMLILSSDGKPFEYNYSIEHARFQCILQEKSIIQI-ACGD 158

Query: 161 SHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
            H+   +L+  GEL+ WG N +GQ+G+     ++  PQ VE L  +P+  I+ G  HS  
Sbjct: 159 YHSL--ALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGKAHSMA 216

Query: 221 LSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGLV 278
           LS S   +Y++G     QL                     +  T GED  SL+       
Sbjct: 217 LSMS-GNVYSWGRNDLGQLG--------------------LGHTDGEDFPSLIETLDNQQ 255

Query: 279 VKKIYSGGDHSIVTVTKSSDGVL 301
           V+ +  GG H+ +  T   DG++
Sbjct: 256 VEFLACGGSHTALLTT---DGLV 275


>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
 gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
          Length = 1423

 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 127/270 (47%), Gaps = 64/270 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSL L     V+ WG +T+GQLG        +  P   +GL SV+  Q  AG SH  
Sbjct: 78  GGSHSLVLTSDQTVWAWGDNTNGQLG--DGTTTGRQTPTPAQGLPSVA--QVSAGESH-- 131

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQ-A 120
                     SLAL D G VF WG ++ GQLG   +AD ++   P +V+GLA+ S ++  
Sbjct: 132 ----------SLALTDDGRVFAWGLNSSGQLGDGTTADSRT---PVQVQGLATDSTIKVV 178

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AG +H L LTS                                       G ++ WG N
Sbjct: 179 AAGGNHSLALTSD--------------------------------------GRVFAWGKN 200

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL- 239
             GQ+G NNS    + P +V+ L    +  +A G NHS  L+ S  R+YA+G+ S+ QL 
Sbjct: 201 SSGQLG-NNSTVDSSIPVQVQGL-PANVTAVAAGGNHSLALT-SDGRIYAWGLNSSGQLG 257

Query: 240 DSPKSVHKTPQLIHG-PWIASPVAMTAGED 268
           D   S   TP L+ G P  + PVA++AG+D
Sbjct: 258 DGTTSNSSTPVLVAGLPAGSKPVAVSAGKD 287



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 78/172 (45%), Gaps = 48/172 (27%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL   G VF WG ++ GQLG  S      SIP +V+GL + +V    AG +H L LT
Sbjct: 184 HSLALTSDGRVFAWGKNSSGQLGNNS--TVDSSIPVQVQGLPA-NVTAVAAGGNHSLALT 240

Query: 66  S-----------------------------------------TTGLWHSLALNDCGEVFT 84
           S                                         + G  HSLAL   G V+ 
Sbjct: 241 SDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYA 300

Query: 85  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV 136
           WGG+++GQLG  +    +  +P +V GLA+V+ V   AG S  L LTS G V
Sbjct: 301 WGGNSYGQLG--NGTTTASEMPVQVTGLANVTAV--SAGGSDSLALTSDGYV 348


>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
          Length = 396

 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 130/266 (48%), Gaps = 35/266 (13%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +SLA+ D G++FTWG +  G LG    + K++S P  VK LA+V +VQA           
Sbjct: 49  NSLAICDDGKLFTWGWNQRGTLG-HPPETKTESTPSLVKSLANVKIVQAA---------- 97

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLE-SADKKSQS------IPKRVKGLASVSVV 118
              G WH LA++D G  + WGG+ +GQ G E S D+  +       IPKR      ++V 
Sbjct: 98  --IGAWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRC--AQQLTVR 153

Query: 119 QACAGYSHCLVLTSSGVVTCTHKENGCGSDPS-------QGVQS-NLVQDSHTTITSLNS 170
           Q  AG +H +VLT  G V    +    G           QG+++  L+        +L  
Sbjct: 154 QVAAGGTHSVVLTREGYVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKE 213

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
            G L+ WGNNEYGQ+G  ++    + P  V+ L +L +  IA G  HS  L+     +Y 
Sbjct: 214 DGTLWAWGNNEYGQLGTGDTQPR-SYPIPVQGLDDLTLVDIAAGGWHSTALTNE-GEVYG 271

Query: 231 FGIGSAVQL---DSPKSVHKTPQLIH 253
           +G G   +L   D+ KS    PQ ++
Sbjct: 272 WGRGEHGRLGFGDNDKSSKMLPQKVN 297



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 137/336 (40%), Gaps = 93/336 (27%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLE-SADKKSQS------IPKRVKGLASVSVVQAC 55
           G WH LA++D G  + WGG+ +GQ G E S D+  +       IPKR      ++V Q  
Sbjct: 99  GAWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRC--AQQLTVRQVA 156

Query: 56  AGYSHCLVLTSTTGLW----------------------------------HSLALNDCGE 81
           AG +H +VLT    +W                                  H+LAL + G 
Sbjct: 157 AGGTHSVVLTREGYVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGT 216

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHK 141
           ++ WG + +GQLG  + D + +S P  V+GL  +++V   AG  H   LT+ G       
Sbjct: 217 LWAWGNNEYGQLG--TGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEG------- 267

Query: 142 ENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGI-NNSNTTVTKPQRV 200
                                          E+Y WG  E+G++G  +N  ++   PQ+V
Sbjct: 268 -------------------------------EVYGWGRGEHGRLGFGDNDKSSKMLPQKV 296

Query: 201 ESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQL---IHGPWI 257
             L    I  ++CG  HS  L++   R+++FG G   +L   + V     L   IH P  
Sbjct: 297 NLLPGEDIIQVSCGGTHSVALTRD-GRIFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPP 355

Query: 258 ASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTV 293
                 T  ED      G  + K +  GG H++  V
Sbjct: 356 EGRFNHTDEED-----DGKWIAKHVACGGRHTLAIV 386



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 90/214 (42%), Gaps = 59/214 (27%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           V  WG    GQLGL + ++K  +           SVV A   ++   V +   G  +SLA
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELA-----------SVVDALEPFN---VRSVVGGSRNSLA 52

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           + D G++FTWG +  G LG    + K++S P  VK LA+V +VQA  G  HCL       
Sbjct: 53  ICDDGKLFTWGWNQRGTLG-HPPETKTESTPSLVKSLANVKIVQAAIGAWHCL------- 104

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                                          +++  G  Y WG NEYGQ G   S     
Sbjct: 105 -------------------------------AVDDQGRAYAWGGNEYGQCGEEPSKDETG 133

Query: 196 KPQRVESLV------NLPIALIACGANHSFVLSK 223
           +P R + ++       L +  +A G  HS VL++
Sbjct: 134 RPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTR 167


>gi|338723782|ref|XP_001915115.2| PREDICTED: LOW QUALITY PROTEIN: e3 ISG15--protein ligase HERC5
           [Equus caballus]
          Length = 966

 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 169/399 (42%), Gaps = 91/399 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG +T+GQLG+      S   P+ V+ L+ V +VQ  AG +   
Sbjct: 90  GDYHSLALSKGGELFAWGQNTYGQLGV-GRTFASTPTPQIVEHLSGVPLVQISAGEA--- 145

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL+    V++WG +  GQLGL   + K    P  ++ L +  V     
Sbjct: 146 ---------HSMALSMSRNVYSWGRNDCGQLGLGHTNNKDS--PSLIEALDNQEVEFLAC 194

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH  +LT  G+V                                      +T+G  + 
Sbjct: 195 GGSHTALLTKDGLV--------------------------------------FTFGAGKC 216

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G N++   +T P  V  LV   +  IACG  H+      + ++++FG G   QL + 
Sbjct: 217 GQLGHNSTQNELT-PCLVTELVGKRVTQIACGRRHTLAYVSDLGKVFSFGSGEGGQLGNG 275

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGED-SLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV- 300
            + H+         I  P+ + + E+    SH+    +  I +GG+ SI+   +  +   
Sbjct: 276 ATHHQL--------IPLPMKLPSNEELKFESHTSEKELIMI-AGGNQSILLWMEKENPYV 326

Query: 301 -LSDDFRVLNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCM 356
            L      LN  T    I DV  ++ +  +RE+++                 +F SP C+
Sbjct: 327 NLRRKIPTLNEGTVKRWIADVGTKKWQNTKREIKE-----------------IFSSPACL 369

Query: 357 NGSFLQVE-----NDEHFSCNSKKFSFIKLSLINWFMKL 390
            GSFL+          H + N  + +F +L+  +W   +
Sbjct: 370 TGSFLRERITAETMSVHLNINKARDTFKELTQKDWITNM 408



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 1/95 (1%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y EE   +WF      ++   F  G LCGL ++N  + N+PFPLAL+KK+LD+  
Sbjct: 684 YGLFTYPEEASYMWFPVRPKFEKKSYFFFGVLCGLCLFNCNVANIPFPLALFKKLLDQTP 743

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP   +SLQ +LD    D  +VF I F
Sbjct: 744 SLEDLKELSPVFGRSLQTLLDDEGEDFGEVFYIHF 778



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 52/283 (18%)

Query: 816  WYLLMSDDYFERLILIFKQCLIYLLQQ-PGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            ++  + +  F +L+ +FK+ +   L      VDS       N  +   L+VL++L+ +N 
Sbjct: 474  YWASLQESAFSKLVQMFKRAMGAQLHYWSESVDS-------NCHVRALLEVLKRLHRVNQ 526

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
                          SN + P            F + +L    D   D ++  + + N  T
Sbjct: 527  --------------SNCQVPE---------NIFEVSELTHWLDFYGDVYKRSAWKMNSDT 563

Query: 935  -RD---FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPH----TLNQY 986
             RD      ++PFIF+  +K  LL  D  +++     Q  F       +P      L+  
Sbjct: 564  SRDSPVVFSHFPFIFNILSKIKLLYADSLLKIWEK-EQRRFMTLDGNVDPGEPELALSSS 622

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
              + V R +++ED +  L ++   D ++ L V+            F GE   D GGVR E
Sbjct: 623  FSLTVRRSHLIEDVLNHLNRFENEDLRRELLVS------------FSGEIPLDYGGVRAE 670

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            F   L +E+  P+YG+F   EE   +WF      ++  YF  G
Sbjct: 671  FFHCLFEELTQPEYGLFTYPEEASYMWFPVRPKFEKKSYFFFG 713



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 18/159 (11%)

Query: 106 PKRVKGLASVSVVQACAGYSHCLVLTSSGV-----VTCTHKENGCGSDPSQGVQSNLVQ- 159
           PK +K    + +     G  H LVL+S G       +  H    C        + N++Q 
Sbjct: 33  PKCIKLGRKMKIHSMDQGAEHLLVLSSDGKPFEYNYSIEHARFQCVLQ-----EKNIIQI 87

Query: 160 ---DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN 216
              D H+   +L+  GEL+ WG N YGQ+G+  +  +   PQ VE L  +P+  I+ G  
Sbjct: 88  TCGDYHSL--ALSKGGELFAWGQNTYGQLGVGRTFASTPTPQIVEHLSGVPLVQISAGEA 145

Query: 217 HSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
           HS  LS S   +Y++G     QL    + +K +P LI  
Sbjct: 146 HSMALSMS-RNVYSWGRNDCGQLGLGHTNNKDSPSLIEA 183



 Score = 41.2 bits (95), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 20/130 (15%)

Query: 407 LGDCVPKSW----LYLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTI 462
           + D   K W      ++ +F SP C+ GSFL+    E  +  + +  +++   +D +  +
Sbjct: 344 IADVGTKKWQNTKREIKEIFSSPACLTGSFLR----ERITAETMSVHLNINKARDTFKEL 399

Query: 463 ARIERESVRSLVSNLAILASHAHLVKSLWNTPPDAEALRMFLTL---PLYHEFMNPRQHE 519
            +      +  ++N+       +L+K+L    P  EAL +F  L   P+ H++ N    E
Sbjct: 400 TQ------KDWITNMITTCLRDNLIKNLPFHSPHREALEVFFLLPECPVMHDYNN---WE 450

Query: 520 ILHMPFAGAL 529
            L +PFA A+
Sbjct: 451 SLVVPFAEAI 460


>gi|426231471|ref|XP_004009762.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Ovis aries]
          Length = 963

 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 165/396 (41%), Gaps = 93/396 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG +  GQLG+      S S P+ V+ L+ V +VQ  AG +   
Sbjct: 160 GDYHSLALSKGGELFAWGQNLDGQLGVGRI-FASTSTPEIVENLSGVPLVQISAGEA--- 215

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL+  G V++WG +  GQLGL     K    P  ++ L    V     
Sbjct: 216 ---------HSMALSMSGNVYSWGRNDCGQLGLGHTYNKDS--PSCIEALDDQKVEFLAC 264

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH  +LT SG+V                                      +T+G+ +Y
Sbjct: 265 GGSHTALLTKSGLV--------------------------------------FTFGDGKY 286

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS     +P  V  LV   +  IACG  H+      + ++++FG G   QL + 
Sbjct: 287 GQLG-HNSTQNELRPCLVAGLVGNRVTQIACGRQHTLAYVSDMGKVFSFGSGKEGQLGNG 345

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKI--YSGGDHSIVTVTKSSDGV 300
            + +   QL+       P  M       +       VK++   +GG+ SI+   +  +  
Sbjct: 346 GTCN---QLM-------PRPMKLPSSEELKSESSTSVKELIMVAGGNQSILMWMEKENSY 395

Query: 301 --LSDDFRVLNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGC 355
             L      LN  T    I DV  ++ +  +RE+ +                 +F SP C
Sbjct: 396 VNLRRKIPTLNEGTVKRWIADVGTKQWQNTKREIRE-----------------IFSSPAC 438

Query: 356 MNGSFLQVENDE-----HFSCNSKKFSFIKLSLINW 386
           + GSFL+   D      H   N+ + +F +L+  +W
Sbjct: 439 LTGSFLRERIDGEMISIHLDLNAARNTFKELTQKDW 474



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 62/95 (65%), Gaps = 1/95 (1%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y EE   +WF      ++   F  G LCGL+++N  + ++PFPLAL+KK+LD+  
Sbjct: 681 YGMFTYPEEASYMWFPVRPKFEKKSYFFFGLLCGLSLFNCNVADIPFPLALFKKLLDQTP 740

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L +SLQ +LD    DLE+VF I F
Sbjct: 741 SLEDLKELSPVLGESLQTLLDDDGDDLEEVFHIHF 775



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 12/99 (12%)

Query: 991  VSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLML 1050
            V R +++ED   +L Q+   D ++ L             V F GE   D GGVR EF   
Sbjct: 624  VRRSHLIEDVFNQLNQFENEDLRREL------------MVSFSGEIGYDFGGVRAEFFYC 671

Query: 1051 LLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            L +E+  P+YGMF   EE   +WF      ++  YF  G
Sbjct: 672  LFQEMTRPEYGMFTYPEEASYMWFPVRPKFEKKSYFFFG 710



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 17/143 (11%)

Query: 106 PKRVKGLASVSVVQACAGYSHCLVLTSSGV-----VTCTHKENGCGSDPSQGVQSNLVQ- 159
           PK +K    + +     G  H LVL+S G       +  H    C        + N++Q 
Sbjct: 103 PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYSIEHARFQCILQ-----EKNIIQI 157

Query: 160 ---DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN 216
              D H+   +L+  GEL+ WG N  GQ+G+     + + P+ VE+L  +P+  I+ G  
Sbjct: 158 TCGDYHSL--ALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEA 215

Query: 217 HSFVLSKSVSRLYAFGIGSAVQL 239
           HS  LS S   +Y++G     QL
Sbjct: 216 HSMALSMS-GNVYSWGRNDCGQL 237


>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
           boliviensis]
          Length = 1024

 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 157/366 (42%), Gaps = 86/366 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG + HGQLG+      S + P+ V+ L+ + + Q  AG +   
Sbjct: 146 GDYHSLALSKGGELFAWGQNLHGQLGV-GRKFPSTTTPQIVEHLSGIPLAQISAGEA--- 201

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL+  G +++WG +  GQLGL+  + K    P  ++ L +  V     
Sbjct: 202 ---------HSMALSMSGNIYSWGKNEFGQLGLDHTESKDS--PSLIEALDNQKVEFLAC 250

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH  +LT  G+                                      L+T+G  ++
Sbjct: 251 GGSHTALLTQDGL--------------------------------------LFTFGAGKH 272

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS     +P  V  L    +  IACG  H+      + ++++FG G   QL + 
Sbjct: 273 GQLG-HNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNG 331

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGED-SLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV- 300
            +  +         I  P+ +++ ED    SH+    +  I +G + SI+   K  +   
Sbjct: 332 GTRDQL--------IPLPMKVSSNEDLKFESHTSEKELIMI-AGENQSILLWIKKENSYV 382

Query: 301 -LSDDFRVLNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCM 356
            L      LN  T    I DV  +R +  +RE+++                 +F SP C+
Sbjct: 383 NLRRTILTLNEGTVKRWIADVETKRWQSTKREIQE-----------------IFSSPACL 425

Query: 357 NGSFLQ 362
           +GSFL+
Sbjct: 426 SGSFLR 431



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 62/96 (64%), Gaps = 1/96 (1%)

Query: 719 HYGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            YG+  Y E  S +WF      ++   F  G LCGL+++N ++ N+PFPLAL+KK+LD+ 
Sbjct: 741 EYGLFMYPEGASCMWFPVKPKFEKKRYFFFGVLCGLSLFNCSVANLPFPLALFKKLLDQM 800

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
             L+DLK+LSP L K+LQ ILD    + E+VF I F
Sbjct: 801 PSLEDLKELSPDLGKNLQTILDDEGDNFEEVFYIHF 836



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 117/288 (40%), Gaps = 38/288 (13%)

Query: 805  LEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQ 864
            + D   +    ++  + +  F +L+ +FK  +I  L      D  N +   N  +   L+
Sbjct: 519  MSDQSSLVLEEYWATLQESTFSKLVQMFKTAIICQL------DYWNENAEENGNVQALLE 572

Query: 865  VLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFR 924
            +L+KL+ +N                 ++   P    +V    + +     VC  R  +  
Sbjct: 573  MLKKLHRVNQ----------------MKCLLPESIFQVDELLYRLDFFVEVCR-RYLWKM 615

Query: 925  WISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFL---QTFNPH 981
             +    N        ++PFIF+  +K  LL  D  ++++   ++  F       +  +  
Sbjct: 616  TVDTLENVGCCVIFSHFPFIFNNLSKIKLLRTDTLVKIQGKKHKAYFRWAAVEEERESEF 675

Query: 982  TLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAG 1041
             L    ++ V R++++ED + +L+Q+   D +K L             V F GE   D G
Sbjct: 676  ALLPTFDLTVRRNHLIEDVLNQLSQFENEDLRKEL------------WVSFSGEIGYDLG 723

Query: 1042 GVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            GV+ EF   L +E+  P+YG+F   E    +WF      ++  YF  G
Sbjct: 724  GVKTEFFYCLFEEMTQPEYGLFMYPEGASCMWFPVKPKFEKKRYFFFG 771


>gi|395545153|ref|XP_003774469.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
            [Sarcophilus harrisii]
          Length = 363

 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 108/208 (51%), Gaps = 56/208 (26%)

Query: 938  LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLNQYLEVEVSRD 994
            LC+YPF+FDA+AKT +L+ D  +QM+ A+N  N      L T  P    + +L + V R 
Sbjct: 5    LCSYPFVFDAQAKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARSPFLVLHVRRS 64

Query: 995  NIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKE 1054
            N+V D +REL+ ++  D KKPLKV             F GEEA DAGGV +EF +LLLKE
Sbjct: 65   NLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVTKEFFLLLLKE 112

Query: 1055 ILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEYEETRSIW 1114
            +L+P YGMF  Y+++  +WFS+  F + N                              W
Sbjct: 113  LLNPIYGMFTYYQDSNLLWFSDTCFVEHN------------------------------W 142

Query: 1115 FSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
            F            LIG +CGLAIYN+TV
Sbjct: 143  FH-----------LIGIICGLAIYNFTV 159



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 60/84 (71%), Gaps = 1/84 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y+++  +WFS+  F + N   LIG +CGLAIYN+T++++ FPLALYKK+L+   
Sbjct: 118 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVKP 177

Query: 779 LLQDLKDLSPTLAKSLQDILDYRE 802
            L+DLK+LSPT  + +  +L  RE
Sbjct: 178 GLEDLKELSPTEGRVIVLVLYERE 201


>gi|308505254|ref|XP_003114810.1| hypothetical protein CRE_28427 [Caenorhabditis remanei]
 gi|308258992|gb|EFP02945.1| hypothetical protein CRE_28427 [Caenorhabditis remanei]
          Length = 797

 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 133/274 (48%), Gaps = 51/274 (18%)

Query: 805  LEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQ 864
            L +  G T  +W+  +S  +F R++ +FK  +  LL       +  G  +        L 
Sbjct: 271  LNEQLGSTLESWWSQLSTRHFRRMVTVFKTAVRTLLH------AEKGPASCQH----YLH 320

Query: 865  VLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFR 924
            +LQKL  +N    T                       +    FY+ +++++ +++++Y+ 
Sbjct: 321  ILQKLFLINQSYHT-----------------------IPLETFYIEEISSIINLKLEYYN 357

Query: 925  WISGRPNGST-RDFLCNYPFIFDAKAKTTLLEMDQR-IQMEHAMNQTNFYLFLQTFNPHT 982
             ++ + +  T +D+   YPF+ +  AK  LL ++   IQ  HA N     L    F  + 
Sbjct: 358  MVTKQHSFKTDKDYWTYYPFLLNGLAKGELLFVEAGLIQAIHAQNAM---LTSGGFEDNP 414

Query: 983  LN-QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAG 1041
             N  + E+ V RD IV DT+ +L+  +  D +K  KV            K  GEEA+DAG
Sbjct: 415  ANILHCEISVRRDFIVADTMLKLSSLSDADLRKAFKV------------KIIGEEADDAG 462

Query: 1042 GVRREFLMLLLKEILDPKYGMFKEYEETRSIWFS 1075
            GVR+EF ++++++IL P+YGMF E EE+  +WFS
Sbjct: 463  GVRKEFFLIVMRKILQPEYGMFSEDEESHLVWFS 496



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/106 (43%), Positives = 62/106 (58%), Gaps = 12/106 (11%)

Query: 720 YGI-TEYEETRSIWFS--EDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKI--- 773
           YG+ +E EE+  +WFS     F ++     +G L GLA+YN  I+  PFPLALYK +   
Sbjct: 481 YGMFSEDEESHLVWFSGLSAEFCEREQFRQLGKLVGLAVYNSVIVPFPFPLALYKVLVFS 540

Query: 774 ------LDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                 LD P  L DL +LSP+  K LQ ++DY   D+EDVFG+ F
Sbjct: 541 IVCLFLLDTPPTLDDLSELSPSEGKGLQALIDYEGDDVEDVFGLNF 586


>gi|148922863|ref|NP_001092233.1| uncharacterized protein LOC100073325 [Danio rerio]
 gi|146218416|gb|AAI39898.1| Zgc:163136 protein [Danio rerio]
          Length = 994

 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 160/377 (42%), Gaps = 86/377 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL++ G +F WG +  GQLGL      +QS P+ ++ L  + V Q  AG +H  
Sbjct: 124 GDQHSMALSNDGLLFVWGENALGQLGLRKEQAGTQS-PQHLQSLCEIPVAQISAGGNHSF 182

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           VL+ +            G VF WG ++ GQLGL   D   + IP  VK L+    V    
Sbjct: 183 VLSLS------------GVVFGWGSNSAGQLGL--GDTTDRFIPTIVKSLSGKKTVSISC 228

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H   L+  G V                                      +T+G+  +
Sbjct: 229 GGEHTATLSKGGTV--------------------------------------FTFGSGGF 250

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS      P+ V  L    ++ + CG +H+ V   S +R+Y+FG G   QL + 
Sbjct: 251 GQLG-HNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVFEDSSNRIYSFGCGMQGQLGNG 309

Query: 243 KSVHKT-PQLIHGPWIASPVAMT---AGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSD 298
           + V ++ P  +  P   +   M    AGE     HS  L  K   + G+ S    + S+ 
Sbjct: 310 EQVKQSVPLPVLLPTECTEFTMEKLIAGE----HHSFALFFK---NPGNESEKPKSGSNG 362

Query: 299 GVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNG 358
           G+L+ + R+++                 R V +     T+  +    + TVF S   +NG
Sbjct: 363 GILTLNDRMID-----------------RWVSESDPWPTVKNE----INTVFSSAASLNG 401

Query: 359 SFLQVENDEHFSCNSKK 375
           SFL+   DEH+  + ++
Sbjct: 402 SFLKTSRDEHYQTSVER 418



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 14/196 (7%)

Query: 96  ESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGC----GSDPSQ 151
           E AD+K + +  + + + S+   +A A     ++L   G V    +   C    G D  Q
Sbjct: 63  EDADEKLEPLQLQNERIRSIVCGEAGA-----VLLADDGKVLVMDQSTVCRPLKGLDNRQ 117

Query: 152 GVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALI 211
            +Q     D H+   +L++ G L+ WG N  GQ+G+         PQ ++SL  +P+A I
Sbjct: 118 VIQI-ACGDQHSM--ALSNDGLLFVWGENALGQLGLRKEQAGTQSPQHLQSLCEIPVAQI 174

Query: 212 ACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHGPWIASPVAMTAGEDSL 270
           + G NHSFVLS S   ++ +G  SA QL    +  +  P ++        V+++ G +  
Sbjct: 175 SAGGNHSFVLSLS-GVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHT 233

Query: 271 VSHSGGLVVKKIYSGG 286
            + S G  V    SGG
Sbjct: 234 ATLSKGGTVFTFGSGG 249



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 48/75 (64%)

Query: 722 ITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQ 781
           I E  E+  +WF+    +D    + +G +CG+A+YN   IN+ FPL L+KK+L +   L 
Sbjct: 717 ILEAHESSLVWFNPHHTQDHRDFYYLGVICGMALYNKHHINIDFPLGLFKKLLQQKPSLD 776

Query: 782 DLKDLSPTLAKSLQD 796
           DL++LSP  A+SL++
Sbjct: 777 DLEELSPVEARSLKN 791



 Score = 41.2 bits (95), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 57/277 (20%), Positives = 115/277 (41%), Gaps = 40/277 (14%)

Query: 816  WYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNE 875
            ++  + DD+FE LI +F +    L++Q   +     D    R L   L++LQ    +   
Sbjct: 504  YWSRLPDDWFEALIKLFHKESAELIKQ---ISRGETDDQSTRHLKNFLEILQMAYQICCS 560

Query: 876  TLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMP---DLATVCDIRIDYFRWISGRPNG 932
            T  ++       V+++         +V + A  +P   +L     +   YF+        
Sbjct: 561  TNITNHDFIIPEVNDLLETLDATTAEVLWMASRLPINEELHNRMKLEDYYFK-------- 612

Query: 933  STRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVS 992
             T + L  +PF+ D   K ++      I ++    ++   L +   N + L+      ++
Sbjct: 613  -TAEILVKFPFVSDFLTKKSMF-----ILLQEQCIRSLLDLLVVHLNGNLLH------IN 660

Query: 993  RDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLL 1052
            R++++ DT++ L  +T + F  PL            QV F GE+  D   +  EF  L+ 
Sbjct: 661  RESVLTDTLQYLRPFTYS-FMHPL------------QVAFIGEDEIDERVISAEFFSLIS 707

Query: 1053 KEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            K  ++    +  E  E+  +WF+    +D   ++ +G
Sbjct: 708  KSFIEWDKKIL-EAHESSLVWFNPHHTQDHRDFYYLG 743


>gi|340368103|ref|XP_003382592.1| PREDICTED: hypothetical protein LOC100632986 [Amphimedon
            queenslandica]
          Length = 2287

 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 171/377 (45%), Gaps = 43/377 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G+ HSLAL+  G ++ WG ++ GQLGL           K ++ +   S++    G     
Sbjct: 1335 GVKHSLALSSDGSLYAWGDNSEGQLGL-----------KTLQPICKPSILSLPFGRP--- 1380

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            V+ +  G  H+LAL   G VF+WG +T  QLG      +  + P ++  L S  VV+   
Sbjct: 1381 VVQAACGDHHTLALTQDGRVFSWGKNTTSQLGHSKGLSRVLA-PTQITHLISTPVVKLIC 1439

Query: 123  GYSHCLVLTSSGVVTC--THKENGCG--------SDPS------QGVQSNLVQDSHTTIT 166
            G +H   LT SG V     ++   CG        S P+      +   S++   +  T+ 
Sbjct: 1440 GSNHSAALTVSGGVFLWGDNRRAQCGFGHVTTKISYPTLNEFMGRYAVSHVACGTDHTVF 1499

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
             + S G +YT G+NEYGQ+G        ++P  +  L+ + +  + CG  H+ +L+K   
Sbjct: 1500 QVQS-GHIYTVGSNEYGQLGRGARGAVYSRPAPIMQLMTVVVQQVVCGRYHTTLLAKYTG 1558

Query: 227  RLYAFGIGSAVQLDSPKSVHKTPQL-IHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
             L  FG G   QL +  +      + + G W +SP           S+    VVK +++G
Sbjct: 1559 DLITFGQGLMGQLGNGTTFSSEQSIPVMGRW-SSPKRYLRSPRPANSN----VVKGVFAG 1613

Query: 286  GDHSIVTV-TKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLL 344
            G+H+  T+     +  L  DF  +        ++   LK+   ++ +  +D T     L 
Sbjct: 1614 GNHTFATILLPDQEEDLPVDFSDIQSQDAPCFLSLGTLKQM-LDLARYTNDYT---GTLQ 1669

Query: 345  YLETVFLSPGCMNGSFL 361
             L+  F SP C+NGSFL
Sbjct: 1670 TLKMFFSSPSCVNGSFL 1686



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 102/192 (53%), Gaps = 20/192 (10%)

Query: 902  VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQ 961
            V++  FY+ ++   CD+R DYF +   R +   R     Y F+ +A  K  L++++ R +
Sbjct: 1865 VSHQKFYVDEIVESCDLREDYFSYKQNRVD---RVLFMRYSFVLNASGKAELMQIEGRYR 1921

Query: 962  MEHAMNQTNFYLFLQTFNPHTLNQY----LEVEVSRDNIVEDTIRELAQYTTNDFKKPLK 1017
               A+   +    L  F+   ++        + V RD+I+ D I  L  + T D  KPL+
Sbjct: 1922 QMEAVAHAHHRNILNWFSAEGISDVSPMAFVINVRRDHILGDAITALRSHDTGDLLKPLR 1981

Query: 1018 VNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSED 1077
            V            +F GEE  D GGV++EF MLL++E+L+P +GMF E +E+R IWF + 
Sbjct: 1982 V------------QFEGEEGFDEGGVQKEFFMLLIRELLNPDFGMFYEEDESRYIWFRQQ 2029

Query: 1078 TFEDQNMYFLIG 1089
            ++ D+  Y L+G
Sbjct: 2030 SY-DRQCYHLVG 2040



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 3/93 (3%)

Query: 724  EYEETRSIWFSEDTFEDQNMCF-LIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQD 782
            E +E+R IWF + +++ Q  C+ L+G +C LAIYN  I+++PFP  LY+K+L     L+D
Sbjct: 2017 EEDESRYIWFRQQSYDRQ--CYHLVGMICALAIYNGVIVDLPFPPVLYRKLLSYTPSLKD 2074

Query: 783  LKDLSPTLAKSLQDILDYREPDLEDVFGITFRN 815
            L+ L P++ K L+ IL Y   D E  + ITF  
Sbjct: 2075 LESLKPSVGKHLRGILTYDGNDFEKDYNITFEK 2107


>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 146/314 (46%), Gaps = 56/314 (17%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +SLA+ + G++FTWG +  G LG   A  KS+++P +VK L++V +VQA           
Sbjct: 49  NSLAITEDGKLFTWGWNQRGTLG-HPAGTKSENVPSQVKALSNVKIVQAA---------- 97

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKR------VKGLASVSVVQ 119
              G WH LA++D G  + WGG+ +GQ G E   K +   P R       +    + V Q
Sbjct: 98  --IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQ 155

Query: 120 ACAGYSHCLVLTSSGVVTCTHKENGCG-----SDPSQGVQS----NLVQDSHTTITSLNS 170
             AG +H +VLT  G V    +    G     S P + VQ      L+        +L  
Sbjct: 156 VAAGGTHSVVLTREGHVWTWGQPWPPGDITQISVPVR-VQGLDMVRLIAVGAFHNLALQE 214

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
            G L+ WGNNEYGQ+G  ++    ++P  V+ L  L +  IA G  HS  L+ +   +Y 
Sbjct: 215 DGTLWAWGNNEYGQLGTGDTQPR-SQPIPVQGLSGLTLVDIAAGGWHSTALTDN-GEVYG 272

Query: 231 FGIGSAVQL---DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGD 287
           +G G   +L   D+ KS    PQ +          + +GE+          + +I  GG 
Sbjct: 273 WGRGEHGRLGFGDNDKSSKMVPQKVQ---------LLSGEE----------IVQISCGGT 313

Query: 288 HSIVTVTKSSDGVL 301
           HS+     +SDG +
Sbjct: 314 HSVAV---TSDGRM 324



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 102/229 (44%), Gaps = 63/229 (27%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+LAL + G ++ WG + +GQLG      +SQ IP  V+GL+ +++V   AG     
Sbjct: 205 GAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIP--VQGLSGLTLVDIAAGG---- 258

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   WHS AL D GEV+ WG   HG+LG    DK S+ +P++V+ L+   +VQ   
Sbjct: 259 --------WHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISC 310

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H + +TS                                       G ++++G  ++
Sbjct: 311 GGTHSVAVTSD--------------------------------------GRMFSFGRGDH 332

Query: 183 GQMGINNSNTTVTKPQRVESLVNLP----------IALIACGANHSFVL 221
           G++G     TT  +P+ V   +  P            L+ACG  H+  L
Sbjct: 333 GRLGYGRKVTT-GQPEEVPIDIPPPRGRTENGHWIAKLVACGGRHTLAL 380


>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 146/314 (46%), Gaps = 56/314 (17%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +SLA+ + G++FTWG +  G LG   A  KS+++P +VK L++V +VQA           
Sbjct: 49  NSLAITEDGKLFTWGWNQRGTLG-HPAGTKSENVPSQVKALSNVKIVQAA---------- 97

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKR------VKGLASVSVVQ 119
              G WH LA++D G  + WGG+ +GQ G E   K +   P R       +    + V Q
Sbjct: 98  --IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQ 155

Query: 120 ACAGYSHCLVLTSSGVVTCTHKENGCG-----SDPSQGVQS----NLVQDSHTTITSLNS 170
             AG +H +VLT  G V    +    G     S P + VQ      L+        +L  
Sbjct: 156 VAAGGTHSVVLTREGHVWTWGQPWPPGDITQISVPVR-VQGLDMVRLIAVGAFHNLALQE 214

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
            G L+ WGNNEYGQ+G  ++    ++P  V+ L  L +  IA G  HS  L+ +   +Y 
Sbjct: 215 DGTLWAWGNNEYGQLGTGDTQPR-SQPIPVQGLSGLTLVDIAAGGWHSTALTDN-GEVYG 272

Query: 231 FGIGSAVQL---DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGD 287
           +G G   +L   D+ KS    PQ +          + +GE+          + +I  GG 
Sbjct: 273 WGRGEHGRLGFGDNDKSSKMVPQKVQ---------LLSGEE----------IVQISCGGT 313

Query: 288 HSIVTVTKSSDGVL 301
           HS+     +SDG +
Sbjct: 314 HSVAV---TSDGRM 324



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 102/229 (44%), Gaps = 63/229 (27%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+LAL + G ++ WG + +GQLG      +SQ IP  V+GL+ +++V   AG     
Sbjct: 205 GAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIP--VQGLSGLTLVDIAAGG---- 258

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   WHS AL D GEV+ WG   HG+LG    DK S+ +P++V+ L+   +VQ   
Sbjct: 259 --------WHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISC 310

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H + +TS                                       G ++++G  ++
Sbjct: 311 GGTHSVAVTSD--------------------------------------GRMFSFGRGDH 332

Query: 183 GQMGINNSNTTVTKPQRVESLVNLP----------IALIACGANHSFVL 221
           G++G     TT  +P+ V   +  P            L+ACG  H+  L
Sbjct: 333 GRLGYGRKVTT-GQPEEVPIDIPPPRGRTENGHWIAKLVACGGRHTLAL 380


>gi|260814706|ref|XP_002602055.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
 gi|229287360|gb|EEN58067.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
          Length = 833

 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 116/240 (48%), Gaps = 43/240 (17%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA-CAGYSHCLVL 64
           H+LAL   GEVF+WG   +G+LG    +  +Q  PK+++G     VV++  AGY H    
Sbjct: 474 HTLALTADGEVFSWGDGDYGKLG--HGNSSTQKYPKQIQGALQGKVVKSISAGYRH---- 527

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLG-------LESADKKSQSIPKRVKGLASVSV 117
                   S A+ + GE+FTWG   +G+LG       L   D      PK ++ L  + +
Sbjct: 528 --------SAAVTEDGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYI 579

Query: 118 VQACAGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQD-SHTTIT---- 166
            + C G    L LTS+G +       C     GCGS  S  ++  LV++ ++T I     
Sbjct: 580 RKVCCGSQSSLALTSTGQLFAWGCGACL----GCGSPESTALRPKLVEELANTRIVDVAC 635

Query: 167 ------SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 +L    E+Y WGNN  GQ G  +S + +TKP++V  L  + +  I+ G +HS  
Sbjct: 636 GDSHCLALTHDNEVYAWGNNAMGQCGQGHSQSPITKPKKVVGLDGVTVHQISAGTSHSLA 695



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 111/252 (44%), Gaps = 69/252 (27%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL----TSTTG 69
           G V   G  ++G+LGL   D  +Q+  K++              + H  V+    +S   
Sbjct: 427 GTVRACGKGSYGRLGL--GDSNNQTTLKKLN-------------FDHRYVIRKISSSKGS 471

Query: 70  LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA-CAGYSHCL 128
             H+LAL   GEVF+WG   +G+LG    +  +Q  PK+++G     VV++  AGY H  
Sbjct: 472 DGHTLALTADGEVFSWGDGDYGKLG--HGNSSTQKYPKQIQGALQGKVVKSISAGYRHSA 529

Query: 129 VLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGIN 188
            +T  G                                      EL+TWG  +YG++G  
Sbjct: 530 AVTEDG--------------------------------------ELFTWGEGDYGRLGHG 551

Query: 189 NSN--------TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           +SN          V KP+ +E+LV L I  + CG+  S  L+ S  +L+A+G G+ +   
Sbjct: 552 DSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSSLALT-STGQLFAWGCGACLGCG 610

Query: 241 SPKSVHKTPQLI 252
           SP+S    P+L+
Sbjct: 611 SPESTALRPKLV 622



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 70/177 (39%), Gaps = 47/177 (26%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLG-------LESADKKSQSIPKRVKGLASVSVVQA 54
            G  HS A+ + GE+FTWG   +G+LG       L   D      PK ++ L  + + + 
Sbjct: 523 AGYRHSAAVTEDGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKV 582

Query: 55  CAGYSHCLVLTSTTGLW---------------------------------------HSLA 75
           C G    L LTST  L+                                       H LA
Sbjct: 583 CCGSQSSLALTSTGQLFAWGCGACLGCGSPESTALRPKLVEELANTRIVDVACGDSHCLA 642

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 132
           L    EV+ WG +  GQ G +   +   + PK+V GL  V+V Q  AG SH L  T+
Sbjct: 643 LTHDNEVYAWGNNAMGQCG-QGHSQSPITKPKKVVGLDGVTVHQISAGTSHSLAWTA 698



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 31/236 (13%)

Query: 38  SIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLES 97
           S+P +V  LAS    ++C   S   +  S+TG   ++ + +  EV+ WG ++  QL   S
Sbjct: 337 SLPSQVAWLAS-DYARSCVCPSPVPIDDSSTGENGNM-VTENSEVYVWGSNSSHQLAEGS 394

Query: 98  ADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN----GCGSDPSQ-- 151
            +K  Q  PK     A+   ++A  G     V+ S G V    K +    G G   +Q  
Sbjct: 395 QEKILQ--PKLSPAFANAQTIEA--GQYCTFVVYSDGTVRACGKGSYGRLGLGDSNNQTT 450

Query: 152 -------------GVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQ 198
                         + S+   D HT   +L + GE+++WG+ +YG++G  NS+T     Q
Sbjct: 451 LKKLNFDHRYVIRKISSSKGSDGHTL--ALTADGEVFSWGDGDYGKLGHGNSSTQKYPKQ 508

Query: 199 RVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHG 254
              +L    +  I+ G  HS  +++    L+ +G G   +L    S  K   L HG
Sbjct: 509 IQGALQGKVVKSISAGYRHSAAVTED-GELFTWGEGDYGRLGHGDSNRK---LGHG 560


>gi|332819950|ref|XP_003310459.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Pan troglodytes]
          Length = 957

 Score =  107 bits (266), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 153/360 (42%), Gaps = 86/360 (23%)

Query: 9   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTT 68
           A    GE+F WG + HGQLG+      S + P+ V+ LA V + Q  AG +H        
Sbjct: 85  ARTPSGELFAWGQNLHGQLGV-GRKFPSTTTPQIVEHLAGVPLAQISAGEAH-------- 135

Query: 69  GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 128
               S+AL+  G +++WG +  GQLGL     +S+  P  ++GL +  V     G SH  
Sbjct: 136 ----SMALSMSGNIYSWGKNEFGQLGL--GHTESKDYPSLIEGLDNQKVEFVACGGSHSA 189

Query: 129 VLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGIN 188
           +LT  G+                                      L+T+G  ++GQ+G +
Sbjct: 190 LLTQDGL--------------------------------------LFTFGAGKHGQLG-H 210

Query: 189 NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKT 248
           NS     +P  V  LV   +  IACG  H+      + ++++FG G   QL +  +  + 
Sbjct: 211 NSTQNELRPCLVAELVEYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQL 270

Query: 249 PQLIHGPWIASPVAMTAGED-SLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV--LSDDF 305
             L        PV +++ E+  L SH+    +  I +GG+ SI+   K  +    L    
Sbjct: 271 MPL--------PVKVSSSEELKLESHTSEKELIMI-AGGNQSILLWIKKENSYVNLKRTI 321

Query: 306 RVLNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSFLQ 362
             LN  T    I DV  +R +  +RE+++                 +F SP C+ GSFL+
Sbjct: 322 PTLNEGTVKRWIADVETKRWQSTKREIQE-----------------IFSSPACLTGSFLR 364



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 1/96 (1%)

Query: 719 HYGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            YG+  Y E  S +WF      ++   F  G LCGL+++N  + N+PFPLAL+KK+LD+ 
Sbjct: 674 EYGMFMYPEGASCMWFPVKPKFEKKRYFFFGVLCGLSLFNCNVANLPFPLALFKKLLDQM 733

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
             L+DLK+LSP L K+LQ +LD    + E+VF I F
Sbjct: 734 PSLEDLKELSPDLGKNLQTLLDDEGDNFEEVFYIHF 769



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/288 (21%), Positives = 116/288 (40%), Gaps = 38/288 (13%)

Query: 805  LEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQ 864
            + D   +    ++  + +  F +L+ +FK  +I  L         NG++         L+
Sbjct: 452  MSDQSSLVLEEYWATLQESTFSKLVQMFKTAVICQLDYWDESAEENGNV------QALLE 505

Query: 865  VLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFR 924
            +L+KL+ +N                 ++   P    +V      +     VC  R  +  
Sbjct: 506  MLKKLHRVNQ----------------VKCQLPESIFQVDELLHRLNFFVEVCR-RYLWKM 548

Query: 925  WISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQME---HAMNQTNFYLFLQTFNPH 981
             +    N        ++PFIF+  +K  LL  D  +++E   H     +  +  +  +  
Sbjct: 549  TVDTSENVQCCVIFSHFPFIFNNLSKIKLLHTDTLLKIEGKKHKAYLRSAAIEEEGESEF 608

Query: 982  TLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAG 1041
             L    ++ V R++++ED + +L+Q+   D +K L             V F GE   D G
Sbjct: 609  ALRPTFDLTVRRNHLIEDVLNQLSQFENEDLRKEL------------WVSFSGEIGYDLG 656

Query: 1042 GVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            GV++EF   L  E++ P+YGMF   E    +WF      ++  YF  G
Sbjct: 657  GVKKEFFYCLFAEMIQPEYGMFMYPEGASCMWFPVKPKFEKKRYFFFG 704



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS+AL+  G +++WG +  GQLGL     +S+  P  ++GL +  V     G SH 
Sbjct: 131 AGEAHSMALSMSGNIYSWGKNEFGQLGL--GHTESKDYPSLIEGLDNQKVEFVACGGSHS 188

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
            +LT              G +FT+G   HGQLG  S   + +  P  V  L    V Q  
Sbjct: 189 ALLTQD------------GLLFTFGAGKHGQLGHNSTQNELR--PCLVAELVEYRVTQIA 234

Query: 122 AGYSHCLVLTS 132
            G  H L   S
Sbjct: 235 CGRWHTLAYVS 245


>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
          Length = 1048

 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 171/391 (43%), Gaps = 63/391 (16%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + S+A+ + G +F WG   +G+L      + S   PK +  +   SVVQ   G  HC
Sbjct: 88  AGDFFSIAIAESGLLFGWGRSLNGEL---MCKQDSLHEPKLLDKIMHWSVVQVACGAQHC 144

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + LT              G + +WG +T GQLGL S++ +    P  +  L +  + Q C
Sbjct: 145 IALTEE------------GTILSWGSNTQGQLGLGSSEIEFLE-PTIIASLNAFPISQIC 191

Query: 122 AGYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQ-------------DSHTT 164
           AG  H  VL+ SG +    K N    G G+  S      LV+             + H+ 
Sbjct: 192 AGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSV 251

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
             + N  G +++WG+   GQ+G +NS   VT+P+++  L+   +  I CG  H+  L+  
Sbjct: 252 CRTRN--GGVFSWGHGGNGQLG-HNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDK 308

Query: 225 VSRLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
             +L  FG+ S  QL +      + P       I  P+++T  +D  +S         I 
Sbjct: 309 -RKLLGFGLNSNNQLGTHNDTSARLP-------ITIPISLT--DDRQLSC--------IA 350

Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLL 343
           +GGD S       S   LS ++ +++   +       +L      +E  K  ++  ++L 
Sbjct: 351 AGGDQSFSGSQNESSCPLSPEY-LMSAGFKQPRRYSSKLAAVYNTLENRKLSDSAQREL- 408

Query: 344 LYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
                +F SP  +N SFL    D H++ NSK
Sbjct: 409 ---AAIFSSPASLNASFL---GDNHWATNSK 433



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 55/222 (24%)

Query: 938  LCNYPFIFDAKAKTTLLEMD------QRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEV 991
             C +PF++DA+AK+ L+ +D      Q+  M    N  N    + T   H  ++ + + +
Sbjct: 630  FCQFPFVYDAQAKSILMRIDSQIHQIQKANMTRQRNINNIAQNILTGQAHLRSEMVVLNI 689

Query: 992  SRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDA-----GGVRRE 1046
            SRD I+ DTI ++        + P  ++   P+     V+F+GEEA DA      GVRRE
Sbjct: 690  SRDKILSDTIYQIMHQIFQSSEGPKALH--KPLI----VQFKGEEARDANIQNEAGVRRE 743

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F MLL++ ILDP YGM KE +E+  +WF                        S + +F E
Sbjct: 744  FFMLLIEAILDPCYGMVKEDDESNLVWFR-----------------------STHGVFDE 780

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYN---YTVRFP 1145
             E      F+++       +FL G +C LAIYN     + FP
Sbjct: 781  DEG-----FNQE-------FFLFGIVCALAIYNDNIVDIHFP 810



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 115/280 (41%), Gaps = 62/280 (22%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +GL H++ L    +V++ G +  GQLG     +KSQ  P  V G  +  +    AG    
Sbjct: 38  SGLRHTVYLTSTRKVYSCGSNEFGQLG----QQKSQCRPSLVTGFGAEEIFHVAAGD--- 90

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                    + S+A+ + G +F WG   +G+L      + S   PK +  +   SVVQ  
Sbjct: 91  ---------FFSIAIAESGLLFGWGRSLNGEL---MCKQDSLHEPKLLDKIMHWSVVQVA 138

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G  HC+ LT  G +                                       +WG+N 
Sbjct: 139 CGAQHCIALTEEGTI--------------------------------------LSWGSNT 160

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL-- 239
            GQ+G+ +S     +P  + SL   PI+ I  GA HS VLS S   L+ +G  +  QL  
Sbjct: 161 QGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPS-GTLFTWGKNNWGQLGH 219

Query: 240 DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLV--SHSGGL 277
            +  S   +P+L+        V +  GE+  V  + +GG+
Sbjct: 220 GNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGV 259



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 58/102 (56%), Gaps = 9/102 (8%)

Query: 720 YG-ITEYEETRSIWF-------SEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYK 771
           YG + E +E+  +WF        ED   +Q   FL G +C LAIYN  I+++ FP ALYK
Sbjct: 757 YGMVKEDDESNLVWFRSTHGVFDEDEGFNQEF-FLFGIVCALAIYNDNIVDIHFPFALYK 815

Query: 772 KILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           K+L E   L DLK+L P++  S+  IL   E D  + +G+ F
Sbjct: 816 KLLGEKPNLTDLKELYPSVGNSMDRILSATEEDCLEDWGLYF 857



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 10/115 (8%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           L  +F SP  +N SFL    D H++ NSKNPG+ +  C      + R       S   ++
Sbjct: 408 LAAIFSSPASLNASFL---GDNHWATNSKNPGLSLSKCSSALVQLFR------HSQSRDI 458

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGALPAF 532
            I +    L+ +L N PPD E LR+ LT+P+   F   +  E     F G + AF
Sbjct: 459 IIHSIKNKLIPALPNVPPDIETLRLHLTIPIVLHFAK-QYKEQFTQDFTGCVVAF 512


>gi|119626423|gb|EAX06018.1| hect domain and RLD 6, isoform CRA_a [Homo sapiens]
          Length = 385

 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 118/253 (46%), Gaps = 56/253 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIMTLNDIKIIQVSCGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   +VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 138 --------YHSLALSKDSQVFSWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H   L+             CG+                           + WG+N  
Sbjct: 189 GGAHSFALSL------------CGTS--------------------------FGWGSNSA 210

Query: 183 GQMGINNSNTTV--TKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           GQ+ ++  N  V   KP  V +L NL +  I+CG  H+ VL++   +++ FG   + QL 
Sbjct: 211 GQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQD-GKVFTFGDNRSGQLG 269

Query: 241 -SPKSVHKTPQLI 252
            SP    + PQL+
Sbjct: 270 YSPTPEKRGPQLV 282



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 113/245 (46%), Gaps = 57/245 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+   +VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +   
Sbjct: 136 GHYHSLALSKDSQVFSWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGA--- 191

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS-IPKRVKGLASVSVVQAC 121
                    HS AL+ CG  F WG ++ GQL L   +   QS  P  V  L ++ VV   
Sbjct: 192 ---------HSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYIS 242

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G +H  VLT                           QD           G+++T+G+N 
Sbjct: 243 CGDAHTAVLT---------------------------QD-----------GKVFTFGDNR 264

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
            GQ+G + +      PQ VE +  L ++ I CG+ H+     +  ++ +FG G +   D+
Sbjct: 265 SGQLGYSPTPEK-RGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFGHGPS---DT 319

Query: 242 PKSVH 246
            K  H
Sbjct: 320 SKPTH 324



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 54/238 (22%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L     V + G ++ GQLG   A +    +P+ ++ L ++            
Sbjct: 30  SGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGE--LPEPIQALETL------------ 75

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           +V   + G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q  
Sbjct: 76  IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIMTLNDIKIIQVS 134

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H L L+                           +DS           ++++WG N 
Sbjct: 135 CGHYHSLALS---------------------------KDS-----------QVFSWGKNS 156

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           +GQ+G+     +   PQRV SL  +P+A +A G  HSF LS   +  + +G  SA QL
Sbjct: 157 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTS-FGWGSNSAGQL 213


>gi|57997475|emb|CAI46056.1| hypothetical protein [Homo sapiens]
          Length = 900

 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 158/367 (43%), Gaps = 86/367 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+   +VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +   
Sbjct: 14  GHYHSLALSKDSQVFSWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGA--- 69

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS-IPKRVKGLASVSVVQAC 121
                    HS AL+ CG  F WG ++ GQL L   +   QS  P  V  L ++ VV   
Sbjct: 70  ---------HSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYIS 120

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G +H  VLT                           QD           G+++T+G+N 
Sbjct: 121 CGDAHTAVLT---------------------------QD-----------GKVFTFGDNR 142

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
            GQ+G + +      PQ VE +  L ++ I CG+ H+     +  ++ +FG G +   D+
Sbjct: 143 SGQLGYSPTPEK-RGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFGHGPS---DT 197

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSG--GLVVKKIYSGGDHSIVTVTK-- 295
            K  H             P A+T   D   L+S      + VK I++G   + VT  +  
Sbjct: 198 SKPTH-------------PEALTENFDISCLISAEDFVDVQVKHIFAGTYANFVTTHQDT 244

Query: 296 SSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGC 355
           SS          ++  +Q +   +  +K    E E  KS+          +  +F SP C
Sbjct: 245 SSTRAPGKTLPEISRISQSMAEKWIAVKRRSTEHEMAKSE----------IRMIFSSPAC 294

Query: 356 MNGSFLQ 362
           +  SFL+
Sbjct: 295 LTASFLK 301



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 1/80 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   FL G LCGL+++N  + N+PFPLALYKK+LD+  
Sbjct: 611 YGMFMYPEMGSCMWFPAKPKPEKKRYFLFGMLCGLSLFNLNVANLPFPLALYKKLLDQKP 670

Query: 779 LLQDLKDLSPTLAKSLQDIL 798
            L+DLK+LSP L KSLQ++L
Sbjct: 671 SLEDLKELSPRLGKSLQEVL 690



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 19/155 (12%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLF-----LQTFNPHTLNQYLEVEVSRD 994
            ++PFIF++ +K  LL+ D  I+M+  M++   Y+      LQ  +    +    + V R 
Sbjct: 500  DFPFIFNSLSKIKLLQADSHIKMQ--MSEKKAYMLMHETILQKKDEFPPSPRFILRVRRS 557

Query: 995  NIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKE 1054
             +V+D +R+L+Q    DF K L             V+F  E   ++GGV  EF   + +E
Sbjct: 558  RLVKDALRQLSQAEATDFCKVL------------VVEFINEICPESGGVSSEFFHCMFEE 605

Query: 1055 ILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +  P+YGMF   E    +WF      ++  YFL G
Sbjct: 606  MTKPEYGMFMYPEMGSCMWFPAKPKPEKKRYFLFG 640


>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
          Length = 1199

 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 103/394 (26%), Positives = 171/394 (43%), Gaps = 69/394 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + S+A+ + G +F WG   +G+L      + S   PK +  +   SVVQ   G  HC
Sbjct: 88  AGDFFSIAIAESGLLFGWGRSLNGEL---MCKQDSLHEPKLLDKIMHWSVVQVACGAQHC 144

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + LT              G + +WG +T GQLGL S++ +    P  +  L +  + Q C
Sbjct: 145 IALTEE------------GTILSWGSNTQGQLGLGSSEIEFLE-PTIIASLNAFPISQIC 191

Query: 122 AGYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQ-------------DSHTT 164
           AG  H  VL+ SG +    K N    G G+  S      LV+             + H+ 
Sbjct: 192 AGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSV 251

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
             + N  G +++WG+   GQ+G +NS   VT+P+++  L+   +  I CG  H+  L+  
Sbjct: 252 CRTRN--GGVFSWGHGGNGQLG-HNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDK 308

Query: 225 VSRLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
             +L  FG+ S  QL +      + P       I  P+++T  +D  +S         I 
Sbjct: 309 -RKLLGFGLNSNNQLGTHNDTSARLP-------ITIPISLT--DDRQLSC--------IA 350

Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKS---DETLDQ 340
           +GGD S       S   LS ++        ++   F++ ++   ++  + +   +  L  
Sbjct: 351 AGGDQSFSGSQNESSCPLSPEY--------LMSAGFKQPRKYSSKLAAVYNTLENRKLSD 402

Query: 341 DLLLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
                L  +F SP  +N SFL    D H++ NSK
Sbjct: 403 SAQRELAAIFSSPASLNASFL---GDNHWATNSK 433



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 55/222 (24%)

Query: 938  LCNYPFIFDAKAKTTLLEMD------QRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEV 991
             C +PF++DA+AK+ L+ +D      Q+  M    N  N    + T   H  ++ + + +
Sbjct: 630  FCQFPFVYDAQAKSILMRIDSQIHQIQKANMTRQRNINNIAQNILTGQAHLRSEMVVLNI 689

Query: 992  SRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDA-----GGVRRE 1046
            SRD I+ DTI ++        + P  ++   P+     V+F GE+A DA      GVRRE
Sbjct: 690  SRDKILSDTINQIMHQIFQSSEGPKALH--KPLI----VQFNGEQARDANIQNEAGVRRE 743

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKE 1106
            F MLL++ ILDP YGM KE +E+  +WF                        S + +F E
Sbjct: 744  FFMLLIEAILDPCYGMVKEDDESNLVWFR-----------------------STHGVFDE 780

Query: 1107 YEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYN---YTVRFP 1145
             E      F+++       +FL G +C LAIYN     + FP
Sbjct: 781  DE-----GFNQE-------FFLFGIVCALAIYNDNIVDIHFP 810



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 115/280 (41%), Gaps = 62/280 (22%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +GL H++ L    +V++ G +  GQLG     +KSQ  P  V G  +  +    AG    
Sbjct: 38  SGLRHTVYLTSTRKVYSCGSNEFGQLG----QQKSQCRPSLVTGFGAEEIFHVAAGD--- 90

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                    + S+A+ + G +F WG   +G+L      + S   PK +  +   SVVQ  
Sbjct: 91  ---------FFSIAIAESGLLFGWGRSLNGEL---MCKQDSLHEPKLLDKIMHWSVVQVA 138

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G  HC+ LT  G +                                       +WG+N 
Sbjct: 139 CGAQHCIALTEEGTI--------------------------------------LSWGSNT 160

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL-- 239
            GQ+G+ +S     +P  + SL   PI+ I  GA HS VLS S   L+ +G  +  QL  
Sbjct: 161 QGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPS-GTLFTWGKNNWGQLGH 219

Query: 240 DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLV--SHSGGL 277
            +  S   +P+L+        V +  GE+  V  + +GG+
Sbjct: 220 GNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGV 259



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 58/102 (56%), Gaps = 9/102 (8%)

Query: 720 YG-ITEYEETRSIWF-------SEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYK 771
           YG + E +E+  +WF        ED   +Q   FL G +C LAIYN  I+++ FP ALYK
Sbjct: 757 YGMVKEDDESNLVWFRSTHGVFDEDEGFNQEF-FLFGIVCALAIYNDNIVDIHFPFALYK 815

Query: 772 KILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           K+L E   L DLK+L P++  S+  IL   E D  + +G+ F
Sbjct: 816 KLLGEKPNLTDLKELYPSVGNSMDRILSATEEDCLEDWGLYF 857



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 10/115 (8%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           L  +F SP  +N SFL    D H++ NSKNPG+ +  C      + R       S   ++
Sbjct: 408 LAAIFSSPASLNASFL---GDNHWATNSKNPGLSLSKCSSALVQLFR------HSQSRDI 458

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGALPAF 532
            I +    L+ SL   PPD E LR+ LT+P+   F   +  E     F G + +F
Sbjct: 459 IIHSIKNKLIPSLPKVPPDIETLRLHLTIPIVLHFAK-QYKEQFTQDFTGCVVSF 512


>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 669

 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 143/322 (44%), Gaps = 62/322 (19%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+  L DCGE+FTWG    G+LG    +++    P+R++ L  +  VQ   G+++  
Sbjct: 279 GGQHAAVLTDCGEIFTWGRGGFGRLG--HGNREGLESPRRIEALEGIPCVQVACGFAYTA 336

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T++            GE++TWG   +G+LGL   D   +  P RV+GL S  V +  A
Sbjct: 337 AVTAS------------GELYTWGAGENGRLGL--GDVADRHTPSRVEGLHS-KVKEVYA 381

Query: 123 GYSHCLVLTSSGVVTC--THKENGCGS-----DPS-----QGVQSNLVQD-------SHT 163
           G  H  VLT  G V     H+  G G      DP       G    LV+         HT
Sbjct: 382 GSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHT 441

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTT---------VTKPQRVESLVNLPIALIACG 214
              +L   G++Y WG+N   Q+GI NS T          +  PQ VESLV + I  +  G
Sbjct: 442 --MALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAG 499

Query: 215 ANHSFVLSKSVSRLYAFGIGSAVQ--LDSPKSVHKTPQLIHG-PWIASPVAMTAGEDSLV 271
             HS  L+    +LY  G     Q  L SP+     PQ   G P+ A        +  L+
Sbjct: 500 WGHSAALTVD-GQLYVCGRNYQGQLGLGSPQGF---PQNERGHPFQA--------DFCLI 547

Query: 272 SHSGGLVVKKIYSGGDHSIVTV 293
                L +K+I  GG+HS+   
Sbjct: 548 DRLQHLKIKQIACGGEHSVAVA 569



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 92/209 (44%), Gaps = 56/209 (26%)

Query: 24  HGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVF 83
           H ++G E  +  S   P  V+GL  +SV Q C G  H  VLT            DCGE+F
Sbjct: 247 HHEVG-EGGEGWSDVSPVVVQGLLGLSVQQVCCGGQHAAVLT------------DCGEIF 293

Query: 84  TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
           TWG    G+LG    +++    P+R++ L  +  VQ   G+++   +T+S          
Sbjct: 294 TWGRGGFGRLG--HGNREGLESPRRIEALEGIPCVQVACGFAYTAAVTAS---------- 341

Query: 144 GCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESL 203
                                       GELYTWG  E G++G+ +     T P RVE L
Sbjct: 342 ----------------------------GELYTWGAGENGRLGLGDVADRHT-PSRVEGL 372

Query: 204 VNLPIALIACGANHSFVLSKSVSRLYAFG 232
            +  +  +  G+ HS VL++  + +YAFG
Sbjct: 373 -HSKVKEVYAGSVHSCVLTREGT-VYAFG 399



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/313 (22%), Positives = 119/313 (38%), Gaps = 105/313 (33%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  ++ A+   GE++TWG   +G+LGL   D   +  P RV+GL S  V +  AG  H  
Sbjct: 331 GFAYTAAVTASGELYTWGAGENGRLGL--GDVADRHTPSRVEGLHS-KVKEVYAGSVHSC 387

Query: 63  VLTSTT-------------------------------------------GLWHSLALNDC 79
           VLT                                              G +H++AL   
Sbjct: 388 VLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQ 447

Query: 80  GEVFTWGGDTHGQLGLESADKKSQSI--------PKRVKGLASVSVVQACAGYSHCLVLT 131
           G+V+ WG +   QLG+ ++    +++        P+ V+ L  +++V+  AG+ H   LT
Sbjct: 448 GQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALT 507

Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
                                                   G+LY  G N  GQ+G+  S 
Sbjct: 508 VD--------------------------------------GQLYVCGRNYQGQLGL-GSP 528

Query: 192 TTVTKPQR----------VESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
               + +R          ++ L +L I  IACG  HS  ++++   +++FG G   QL  
Sbjct: 529 QGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAEN-GEVWSFGAGQKGQLGH 587

Query: 242 PKSVHKT-PQLIH 253
             +  +  P+L+ 
Sbjct: 588 ESTTREDFPRLVQ 600



 Score = 43.9 bits (102), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 9/138 (6%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           + G  HS AL   G+++  G +  GQLGL S     Q  P+  +G    +         H
Sbjct: 497 VAGWGHSAALTVDGQLYVCGRNYQGQLGLGS----PQGFPQNERGHPFQADFCLIDRLQH 552

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASV--SVV 118
             +     G  HS+A+ + GEV+++G    GQLG ES  +  +  P+ V+ L S    ++
Sbjct: 553 LKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTR--EDFPRLVQALKSTRREIM 610

Query: 119 QACAGYSHCLVLTSSGVV 136
               G ++C ++ + GV 
Sbjct: 611 HVACG-NNCTLVLAGGVA 627


>gi|384497603|gb|EIE88094.1| hypothetical protein RO3G_12805 [Rhizopus delemar RA 99-880]
          Length = 628

 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/152 (36%), Positives = 89/152 (58%), Gaps = 16/152 (10%)

Query: 938  LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIV 997
             C YPF+    +K  ++E+D + QME    +  F +    F   T   YL + VSRDN++
Sbjct: 274  FCQYPFLISMGSKMKIVEIDAKQQMETKWREAFFNML---FYQKTSMPYLILRVSRDNLI 330

Query: 998  EDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILD 1057
            ED++R+LAQ    D KK L++            +F GEE  DAGG+R+E+ +LL++ + D
Sbjct: 331  EDSLRQLAQNKL-DLKKSLRI------------EFIGEEGVDAGGLRKEWFLLLVRSLFD 377

Query: 1058 PKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            P+Y MF   E++   WF+  +FE+++ +FL+G
Sbjct: 378  PQYSMFTYDEDSNLCWFNPASFENEDQFFLVG 409



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 61/96 (63%), Gaps = 2/96 (2%)

Query: 719 HYGITEYEETRSI-WFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            Y +  Y+E  ++ WF+  +FE+++  FL+G + GLAIYN TI+++  P A YKK+L+ P
Sbjct: 379 QYSMFTYDEDSNLCWFNPASFENEDQFFLVGVVLGLAIYNSTILDIHLPTACYKKLLNMP 438

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           + L DL    P L +    +L++ + D+E++F  +F
Sbjct: 439 VGLSDLGSFRPALKRGFDQLLEF-DGDVENIFCRSF 473


>gi|355694489|gb|AER99686.1| hect domain and RLD 3 [Mustela putorius furo]
          Length = 516

 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 114/238 (47%), Gaps = 48/238 (20%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
            NW+  +   Y   L+ ++K  ++YLL+           + FN  ++  L++L+KL  +N 
Sbjct: 317  NWWSQVCPKYXXXLVNLYKGAVVYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 373

Query: 875  ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
            +                        + V Y  FY+P+++++ DI+ DY  W   +     
Sbjct: 374  KV-----------------------KHVEYDTFYIPEISSLVDIQEDYLMWFLHQAGMKA 410

Query: 935  RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNP-HTLN 984
            R         LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    +
Sbjct: 411  RPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 470

Query: 985  QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGG 1042
             +L + V R+N+V D +REL+ ++  D KKPLK            V F GEEA DAGG
Sbjct: 471  PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLK------------VIFDGEEAVDAGG 516



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 13/216 (6%)

Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
           + HT +  L   G ++T+G    GQ+G ++ N  V  P+RV  L+   +  IACG  H+ 
Sbjct: 22  EEHTAV--LTKSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTL 78

Query: 220 VLSKSVSRLYAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLV 278
               S   +YAFG G+  QL +  + + K P  + G W A    ++A  D    H    +
Sbjct: 79  AFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----I 134

Query: 279 VKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETL 338
           VK+I+SGGD + V  +K  +   + DFR +N A     +N E +    +++ +  +  T+
Sbjct: 135 VKQIFSGGDQTFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNANTI 194

Query: 339 DQDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNSK 374
           +      +  +  S  C NGSFL+ + DEHF  + K
Sbjct: 195 NG-----VVQILSSAACWNGSFLEKKIDEHFKTSPK 225



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)

Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
           +  S  C NGSFL+ + DEHF  + K PG+D+   +  ++ +      S  S++    + 
Sbjct: 200 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLM----SSQHSMILEQILN 255

Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
           +  + L+  L ++PPD EA+R++L LP +    + + +  L +P A A+
Sbjct: 256 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 304



 Score = 45.4 bits (106), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 13/92 (14%)

Query: 3  GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
          G  H+  L   G VFT+G  + GQLG +S + +    P+RV  L    V Q   G  H L
Sbjct: 21 GEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIACGRQHTL 78

Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLG 94
              ++GL           ++ +G    GQLG
Sbjct: 79 AFVPSSGL-----------IYAFGCGARGQLG 99



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 48/114 (42%), Gaps = 19/114 (16%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P  VK L +  VV    G  H  VLT + G            VFT+G  + GQLG +S +
Sbjct: 4   PCHVKLLRTQKVVYISCGEEHTAVLTKSGG------------VFTFGAGSCGQLGHDSMN 51

Query: 100 KKSQSIPKRVKGLASVSVVQACAGYSHCLVLT-SSGVVTCTHKENGCGSDPSQG 152
            +    P+RV  L    V Q   G  H L    SSG++       GCG+    G
Sbjct: 52  DEVN--PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF----GCGARGQLG 99


>gi|354497414|ref|XP_003510815.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
            [Cricetulus griseus]
          Length = 413

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/155 (44%), Positives = 99/155 (63%), Gaps = 15/155 (9%)

Query: 938  LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLNQYLEVEVSRD 994
            LC+YPFIFDA+AKT +L+ D  +QM+ A+N  N      L T  P    + +L + V R+
Sbjct: 13   LCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRN 72

Query: 995  NIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKE 1054
            ++V D +REL+ ++  D KKPLKV             F GEEA DAGGV +EF +LLLKE
Sbjct: 73   HLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVTKEFFLLLLKE 120

Query: 1055 ILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +L+P YGMF  Y++++ +WFS+  F ++N + LIG
Sbjct: 121  LLNPIYGMFTYYQDSQLLWFSDTCFVERNWFHLIG 155



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 70/95 (73%), Gaps = 1/95 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T Y++++ +WFS+  F ++N   LIG  CGLAIYN T++++ FPLALYKK+L+   
Sbjct: 126 YGMFTYYQDSQLLWFSDTCFVERNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 185

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 186 GLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 220


>gi|326664251|ref|XP_688463.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 992

 Score =  105 bits (262), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 167/376 (44%), Gaps = 59/376 (15%)

Query: 13  CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWH 72
           CGE      D  G++ +   DK ++  P  +KGL +  V+Q   G  H            
Sbjct: 86  CGEYGAVLLDDGGKVLI--MDKSTECSP--LKGLENRQVIQIACGDQH------------ 129

Query: 73  SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 132
           S+AL + G++F WG +  GQLGL      +QS P+ ++ L  + V Q  AG +H  VL+ 
Sbjct: 130 SMALTNDGQLFVWGENALGQLGLRKEQAGTQS-PRHLQSLCGIPVAQISAGGNHSFVLSL 188

Query: 133 SGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGE----------LYTWG 178
           SGVV      +  + G G    + V + +       I S++  GE          ++T+G
Sbjct: 189 SGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFG 248

Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
           +  +GQ+G +NS      P+ V  L    ++ + CG NH+ V + S   +Y+FG G   Q
Sbjct: 249 SGGFGQLG-HNSFKDEHHPRLVAELWGSKVSQVTCGRNHTLVSTASPKLIYSFGCGMQGQ 307

Query: 239 LDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSD 298
           L + + V ++  L        PV      D    ++    ++K+ +G +HS     K   
Sbjct: 308 LGNGEQVKQSVPL--------PV------DQPTEYNDEYTIQKLVAGENHSFALYFKELG 353

Query: 299 GVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNG 358
              + D     P   I+  +   +++CE   +  K+ + L +        VF S   +NG
Sbjct: 354 NEANPD-----PTRGIMTFDNGMIEQCECGKDPRKAIKDLKK--------VFSSAASLNG 400

Query: 359 SFLQVENDEHFSCNSK 374
           SFL+  +D H+  + +
Sbjct: 401 SFLKTRHDGHYQTSEE 416



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 48/77 (62%)

Query: 731 IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPTL 790
           IWF      ++   FL G LCGLA  N +++N+PFPLAL+KK+L+    L+D  + +P  
Sbjct: 721 IWFPAKLTVEKKKYFLFGILCGLAFNNSSVVNLPFPLALFKKLLNIKPSLEDFIEFNPVH 780

Query: 791 AKSLQDILDYREPDLED 807
            +SLQ IL+Y    LE+
Sbjct: 781 GRSLQYILEYSNDVLEE 797



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 6/90 (6%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           L+ VF S   +NGSFL+  +D H+  + +  G+D  L +    T++R ER     L+S +
Sbjct: 388 LKKVFSSAASLNGSFLKTRHDGHYQTSEEYCGLDFGLVESSIATLSRNER-----LISTV 442

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLP 507
             +   + L+ +L   P   E+LR+++ LP
Sbjct: 443 LKVLQES-LLPTLNPNPTGEESLRLYILLP 471


>gi|55832766|gb|AAV66896.1| truncated HERC6 [Homo sapiens]
          Length = 364

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 118/253 (46%), Gaps = 56/253 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIMTLNDIKIIQVSCGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   +VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 138 --------YHSLALSKDSQVFSWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H   L+             CG+                           + WG+N  
Sbjct: 189 GGAHSFALSL------------CGTS--------------------------FGWGSNSA 210

Query: 183 GQMGINNSNTTV--TKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           GQ+ ++  N  V   KP  V +L NL +  I+CG  H+ VL++   +++ FG   + QL 
Sbjct: 211 GQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQD-GKVFTFGDNRSGQLG 269

Query: 241 -SPKSVHKTPQLI 252
            SP    + PQL+
Sbjct: 270 YSPTPEKRGPQLV 282



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 113/245 (46%), Gaps = 57/245 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+   +VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +   
Sbjct: 136 GHYHSLALSKDSQVFSWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGA--- 191

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS-IPKRVKGLASVSVVQAC 121
                    HS AL+ CG  F WG ++ GQL L   +   QS  P  V  L ++ VV   
Sbjct: 192 ---------HSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYIS 242

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G +H  VLT                           QD           G+++T+G+N 
Sbjct: 243 CGDAHTAVLT---------------------------QD-----------GKVFTFGDNR 264

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
            GQ+G + +      PQ VE +  L ++ I CG+ H+     +  ++ +FG G +   D+
Sbjct: 265 SGQLGYSPTPEK-RGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFGHGPS---DT 319

Query: 242 PKSVH 246
            K  H
Sbjct: 320 SKPTH 324



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 54/238 (22%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L     V + G ++ GQLG   A +    +P+ ++ L ++            
Sbjct: 30  SGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGE--LPEPIQALETL------------ 75

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           +V   + G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q  
Sbjct: 76  IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIMTLNDIKIIQVS 134

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H L L+                           +DS           ++++WG N 
Sbjct: 135 CGHYHSLALS---------------------------KDS-----------QVFSWGKNS 156

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           +GQ+G+     +   PQRV SL  +P+A +A G  HSF LS   +  + +G  SA QL
Sbjct: 157 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTS-FGWGSNSAGQL 213


>gi|449015482|dbj|BAM78884.1| ubiquitin protein ligase E3A [Cyanidioschyzon merolae strain 10D]
          Length = 1112

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 112/237 (47%), Gaps = 27/237 (11%)

Query: 865  VLQKLNSLNNETLTSSISAGGRTVSNIRTPAP-------HGGRKVAYTAFYMPDLATVCD 917
            ++Q+  +  N+ ++ S+ A  R      T A          G ++  T FY   ++ + D
Sbjct: 630  IIQRFVTPMNDLISISLRATKRVSQATITAAKFLELVHRAAGDRLPRTVFYNDAVSNIVD 689

Query: 918  IRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQ- 976
            +  DY RW   R    +  F  + PF+ D  AK  +L  + R+       Q  F   L  
Sbjct: 690  LWTDYERW---RRAPESFSFCKDAPFLIDQAAKARILHEEARVTQHSEQMQAFFQHVLPM 746

Query: 977  ----TFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKF 1032
                   P   + +  + V R++IV DT+  +    + D  KPL+V            +F
Sbjct: 747  PFGIIGQPLGADTFCVLRVRREHIVSDTLVCIRSLDSRDLLKPLRV------------EF 794

Query: 1033 RGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             GE A D GGVR+E++M+L++++L P YGMF+   ETR IWF+  +FE +  + L+G
Sbjct: 795  IGEPAVDEGGVRKEYMMMLMEKLLSPDYGMFQYDAETRYIWFNPHSFESKIEFMLVG 851



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/97 (46%), Positives = 66/97 (68%), Gaps = 4/97 (4%)

Query: 720 YGITEYE-ETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ +Y+ ETR IWF+  +FE +    L+G L GLA+YN  I+ + FP  LYK++L   +
Sbjct: 822 YGMFQYDAETRYIWFNPHSFESKIEFMLVGLLIGLAVYNGIILEVHFPPILYKRLLGMSV 881

Query: 779 LLQDLKDLSPTLAKSLQDILDY--REPDLEDVFGITF 813
            + DL+D  P +A+SLQ +L Y  +EP +EDVFG+TF
Sbjct: 882 DVADLRDAFPRVAQSLQQLLAYEGKEP-VEDVFGLTF 917



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 83/205 (40%), Gaps = 31/205 (15%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  H LAL+  GE F  G     +   +       SI      L ++  + A  G   C
Sbjct: 192 AGRHHFLALSWAGECFLGGNPNPAETNPDGTVSTKPSI------LTNIRRIHALYGQPVC 245

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVK-GLASVSVV 118
            +    +G +H   +   G  FT+G +  GQLG  +A   +  +  P RV   L +   V
Sbjct: 246 RI---ASGAYHVALITSSGSCFTFGDNRDGQLGNPAATNGAAFVLQPTRVPLALPNDVYV 302

Query: 119 QACAGYSHCLVLTSSG-VVTCTHKENGCGSDPSQG-------VQSNLVQ---------DS 161
               G  H L+LT+SG VV+     NG     S         V   LV          DS
Sbjct: 303 DVACGARHTLILTASGKVVSVGGGRNGQLGHGSTADISTVTVVHGPLVDKHIVAIAAGDS 362

Query: 162 HTTITSLNSPGELYTWGNNEYGQMG 186
           H+   +L++ G LY WG  E GQ+G
Sbjct: 363 HSL--ALDAEGTLYAWGAGESGQLG 385



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 120/306 (39%), Gaps = 51/306 (16%)

Query: 45  GLASV-SVVQACAGYSHCLVLT--------STTGLWHSLAL-NDCGEV-------FTWGG 87
            LAS+   V A  G +  +VLT        S +G    LAL  +C  V       F  G 
Sbjct: 100 ALASIPEPVYAVGGTNFTVVLTRPGTLFFLSESGTPARLALPTECVSVACSAHVAFAVGR 159

Query: 88  DTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGS 147
           D      L+S + + Q    RV  L    +VQ  AG  H L L+ +G        N   +
Sbjct: 160 DGSLYYILQSEEGRVQI--DRVSELGDYKIVQVAAGRHHFLALSWAGECFLGGNPNPAET 217

Query: 148 DPSQGVQSN-------------------LVQDSHTTITSLNSPGELYTWGNNEYGQMG-- 186
           +P   V +                     +      +  + S G  +T+G+N  GQ+G  
Sbjct: 218 NPDGTVSTKPSILTNIRRIHALYGQPVCRIASGAYHVALITSSGSCFTFGDNRDGQLGNP 277

Query: 187 -INNSNTTVTKPQRVE-SLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
              N    V +P RV  +L N     +ACGA H+ +L+ S  ++ + G G   QL    +
Sbjct: 278 AATNGAAFVLQPTRVPLALPNDVYVDVACGARHTLILTAS-GKVVSVGGGRNGQLGHGST 336

Query: 245 VH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVK-KIYSGGDHSIVTVTKSSDGVLS 302
               T  ++HGP +   +   A  D   SHS  L  +  +Y+ G        +  DG +S
Sbjct: 337 ADISTVTVVHGPLVDKHIVAIAAGD---SHSLALDAEGTLYAWGAGE---SGQLGDGDVS 390

Query: 303 DDFRVL 308
           D  R L
Sbjct: 391 DKLRPL 396



 Score = 47.4 bits (111), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 13/104 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+L L   G+V + GG  +GQLG  S              +++V+VV       H +
Sbjct: 307 GARHTLILTASGKVVSVGGGRNGQLGHGS-----------TADISTVTVVHGPLVDKHIV 355

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP 106
            + +  G  HSLAL+  G ++ WG    GQLG      K + +P
Sbjct: 356 AIAA--GDSHSLALDAEGTLYAWGAGESGQLGDGDVSDKLRPLP 397


>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
          Length = 1263

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 163/398 (40%), Gaps = 89/398 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG + HGQLG+      S   P+ V+ L+ V +VQ  AG +   
Sbjct: 385 GDYHSLALSKGGELFAWGQNLHGQLGVGRL-FTSIPTPQLVEHLSGVPLVQISAGKA--- 440

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL+  G +++WG +  GQLGL   +   +  P  ++ L +  V     
Sbjct: 441 ---------HSMALSMSGNIYSWGRNDLGQLGLGHTN--GEDFPSLIEALDNQKVEFLAC 489

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH  +LT  G+V                                      +T+G  +Y
Sbjct: 490 GGSHTALLTKDGLV--------------------------------------FTFGAGKY 511

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS     +P+ V  L    +  +ACG  H+      + ++++FG G   QL + 
Sbjct: 512 GQLG-HNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYVSDLGKVFSFGSGKEGQLGNG 570

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVLS 302
            +        H   I  P+ + + E+             + +GG+ SI+      +  ++
Sbjct: 571 GT--------HNQLIPLPMKLPSNEELKFESRTSEKELIMIAGGNQSILLWMGKKNPYVN 622

Query: 303 DDFRV--LNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMN 357
              R+  LN  T    I DV  ++ +  +RE+ +                 +F SP C+ 
Sbjct: 623 LRRRIPTLNEGTVKRWIADVGTKQWQNTKREIRE-----------------IFSSPACLI 665

Query: 358 GSFLQVENDE-----HFSCNSKKFSFIKLSLINWFMKL 390
           GSFL+          H   N  +  F +L+  +W   +
Sbjct: 666 GSFLKERIAAETMLIHLDLNKARNDFKELTQKDWIANM 703



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 61/95 (64%), Gaps = 1/95 (1%)

Query: 720  YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
            YG+  Y E  S +WF      ++   F  G LCGL+++N+ + N+PFPLAL+KK+LD+  
Sbjct: 981  YGMFTYPEDASYMWFPVTPKFEKKRYFFFGVLCGLSLFNFNVANIPFPLALFKKLLDQTP 1040

Query: 779  LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
             L+DLK+LSP L KSLQ +LD    D  +VF I F
Sbjct: 1041 SLEDLKELSPVLGKSLQTLLDDEGDDFGEVFLIYF 1075



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 99/254 (38%), Gaps = 80/254 (31%)

Query: 907  FYMPDLATVCDIRIDYFRWISGRPNGSTRD------FLCNYPFIFDAKAKTTLLEMDQRI 960
            F + +L    D   D +R  S + N  T           ++PFIF+  +K  LL  D  +
Sbjct: 831  FKVNELTHWLDFYGDAYRRSSWKVNSDTSVGTQYPVIFSHFPFIFNILSKIKLLYADSLL 890

Query: 961  QMEHA-----------MNQTNFYL-FLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYT 1008
            +++             M Q    L  L TFN         + V R +++ED +  L Q+ 
Sbjct: 891  KIQEKKFRACMRLAGIMEQGGSQLALLPTFN---------LTVRRSHLIEDVLNHLNQFE 941

Query: 1009 TNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEE 1068
              D ++ L V+            F GE   D+GGV+ EF   L +E+  P+YGMF   E+
Sbjct: 942  NEDLRRELMVS------------FSGEIGHDSGGVKVEFFHCLFEEMTRPEYGMFTYPED 989

Query: 1069 TRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEYEETRSIWFSEDTFEDQNMYFL 1128
               +WF                   P T         ++E+ R              YF 
Sbjct: 990  ASYMWF-------------------PVT--------PKFEKKR--------------YFF 1008

Query: 1129 IGTLCGLAIYNYTV 1142
             G LCGL+++N+ V
Sbjct: 1009 FGVLCGLSLFNFNV 1022



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 9/122 (7%)

Query: 123 GYSHCLVLTSSGV-----VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTW 177
           G  H L+L+S G       +  H    C       +Q     D H+   +L+  GEL+ W
Sbjct: 345 GAEHMLILSSDGKPFEYNYSIEHARFQCILQEKSIIQIT-CGDYHSL--ALSKGGELFAW 401

Query: 178 GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
           G N +GQ+G+    T++  PQ VE L  +P+  I+ G  HS  LS S   +Y++G     
Sbjct: 402 GQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGKAHSMALSMS-GNIYSWGRNDLG 460

Query: 238 QL 239
           QL
Sbjct: 461 QL 462


>gi|224589107|ref|NP_001139174.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
          Length = 985

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 156/376 (41%), Gaps = 78/376 (20%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL++ G++F WG + HGQLGL       QS P+ ++ L  + V Q  AG +H  
Sbjct: 126 GDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQS-PQHLQSLCGIPVAQISAGGNHSF 184

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           VL+ +            G VF WG ++ GQLGL   D   + +P  VK L+    V    
Sbjct: 185 VLSLS------------GVVFGWGSNSAGQLGL--GDTTDRFVPTIVKSLSGKKTVSISC 230

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H   L+  G V                                      +T+G+  +
Sbjct: 231 GGEHTATLSKGGTV--------------------------------------FTFGSGGF 252

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS      P+ V  L    ++ + CG +H+ VL    +R+Y+FG G   QL + 
Sbjct: 253 GQLG-HNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNG 311

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVLS 302
           + V ++  L        PV +    +          ++KI +G  HS     K+     +
Sbjct: 312 EQVKQSVPL--------PVLLPTDCNC------EFTMEKIIAGEKHSFALFFKNPGNEST 357

Query: 303 DDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSFLQ 362
                +N    IL +N       +R +++  S       +   ++ VF S  C+NGSFL+
Sbjct: 358 KPKSSMNGG--ILTLN-------DRMIDRWVSGSYPWPTVKKEIKKVFSSAVCLNGSFLK 408

Query: 363 VENDEH-FSCNSKKFS 377
              DE  F    K FS
Sbjct: 409 PSLDEQDFDLVGKSFS 424



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 11/170 (6%)

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV-----QDSHTTITSLNSPGELYTW 177
           G    ++L   G V    K   C   P +G+ +  V      D H+   +L++ G+L+ W
Sbjct: 87  GEDGAVLLADGGKVLLMDKYTVC--RPLKGLDNTKVIQIACGDQHSV--ALSNDGQLFVW 142

Query: 178 GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
           G N +GQ+G+      +  PQ ++SL  +P+A I+ G NHSFVLS S   ++ +G  SA 
Sbjct: 143 GENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAGGNHSFVLSLS-GVVFGWGSNSAG 201

Query: 238 QLDSPKSVHK-TPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
           QL    +  +  P ++        V+++ G +   + S G  V    SGG
Sbjct: 202 QLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGG 251



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 53/88 (60%)

Query: 722 ITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQ 781
           I E   +  +WF+          + +G +CG+A+YN   IN+ FPLAL+KK+L +   L 
Sbjct: 709 ILEVHPSSLVWFNPHHTRGNKNFYYLGVICGMALYNRHHINIDFPLALFKKLLQQKPSLD 768

Query: 782 DLKDLSPTLAKSLQDILDYREPDLEDVF 809
           DL++LSP  A+SL+++L   E  ++ +F
Sbjct: 769 DLEELSPVEARSLKNLLKEDEEVVDLLF 796


>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1080

 Score =  104 bits (260), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 147/371 (39%), Gaps = 92/371 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++ L+  G+V+TWG ++ GQLGL      S S P+ V+ L+S+ VVQ  AG     
Sbjct: 130 GSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGGD--- 186

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS AL+  G VF WG +  GQLGL   D   +  P  V  L     V A  
Sbjct: 187 ---------HSFALSVSGSVFGWGRNDCGQLGL--GDTTDRETPTLVHYLNMKKTVFAAC 235

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H  VLT  G V                                      +T+G+  Y
Sbjct: 236 GKDHTAVLTMDGTV--------------------------------------FTFGSGHY 257

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G +NS      P+ V  L    +  IACG  H+ VL+  + ++Y+FG     QL   
Sbjct: 258 GQLG-HNSFRNALCPRLVAELWGAKVTKIACGRYHTLVLTDHM-KVYSFGCNEHGQLGPR 315

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVLS 302
           +  H        P +  PV +            G +++ I++GGD S  T          
Sbjct: 316 EETH--------PCVPLPVQLP---------REGPIIQNIFAGGDSSFATC--------- 349

Query: 303 DDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSFLQ 362
                  P   + +V  E L   +R + +   D  L   +   ++  F S   MN SFL 
Sbjct: 350 ------RPEQDVSEVPVEIL--VDRWISEW--DSKLQTKVKQEIDQRFSSASLMNRSFLN 399

Query: 363 VENDEHFSCNS 373
               +HF  +S
Sbjct: 400 --QSKHFQTSS 408



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 1/80 (1%)

Query: 731 IWFSEDTFED-QNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPT 789
           +WFS +  E  +   +L G LCGLA++N  I  +PFPL L+KK+L     LQD+ +  P 
Sbjct: 724 VWFSINEPERIKADVYLFGLLCGLALHNDCIFPVPFPLVLFKKLLGVKPTLQDMMEFCPE 783

Query: 790 LAKSLQDILDYREPDLEDVF 809
           + KSLQ I++Y + DLED +
Sbjct: 784 VGKSLQYIMNYEDDDLEDQY 803



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 15/138 (10%)

Query: 938  LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIV 997
            LC++ F+ D K+K  + + +    ++    +   Y F     P     Y E+ + R ++V
Sbjct: 605  LCSFAFVMDFKSKQLVFQCNSYFTVQEVQQERMLYYFQGLAPPPP--SYFELNLRRSSLV 662

Query: 998  EDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILD 1057
            ED+ R+LA+    D KK L V      Y     K            +++F   L   I +
Sbjct: 663  EDSFRQLAEAPPTDIKKALVV------YFDGDTKI-------TNVYKKDFFHHLFPRIKE 709

Query: 1058 PKYGMFKEYEETRSIWFS 1075
             K  MF+  +    +WFS
Sbjct: 710  EKPEMFRTNDSETLVWFS 727


>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60474380|gb|EAL72317.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2044

 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 124/279 (44%), Gaps = 36/279 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  H  A+   GE+ TWG   +GQLG    D  +Q  PK ++ L S  + Q   G  H +
Sbjct: 812  GFCHGAAVRANGELLTWGVGENGQLG--HGDTNNQIEPKIIQSLTSFWITQVQCGEKHTI 869

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             LT              G+V++WG   +GQLGL   D    S P +V  L   +V+Q  +
Sbjct: 870  CLTKN------------GKVYSWGASEYGQLGL--GDVTQHSSPMQVSALEKYNVLQIAS 915

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDS------------HTTITSLNS 170
            G +HC VLT+S  V      NG     +  V    +  S            H +  ++  
Sbjct: 916  GSTHCAVLTTSKEVLVFG--NGAAMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITE 973

Query: 171  PGELYTWGN-NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G++YTWG   E G  G    N+T T P+ +E+L N  I  I+CG  H+  L+ S  R++
Sbjct: 974  CGDVYTWGTGQELGHGG----NSTETSPKLIEALRNQSIRQISCGGRHTAFLTDS-GRIF 1028

Query: 230  AFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGED 268
              G  S  QL         P+ I      + ++++ GE+
Sbjct: 1029 TCGKDSFGQLGQMSGDQNKPKRIESLTKTTFISVSCGEN 1067



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 42/175 (24%)

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V++ + G  H  A+   GE+ TWG   +GQLG    D  +Q  PK ++ L S  + Q   
Sbjct: 806 VVSVSIGFCHGAAVRANGELLTWGVGENGQLG--HGDTNNQIEPKIIQSLTSFWITQVQC 863

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H + LT +G V                                      Y+WG +EY
Sbjct: 864 GEKHTICLTKNGKV--------------------------------------YSWGASEY 885

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
           GQ+G+ +  T  + P +V +L    +  IA G+ H  VL+ S   +  FG G+A+
Sbjct: 886 GQLGLGDV-TQHSSPMQVSALEKYNVLQIASGSTHCAVLTTS-KEVLVFGNGAAM 938


>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
           sp. JC66]
          Length = 851

 Score =  104 bits (259), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 137/267 (51%), Gaps = 42/267 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL   G+V+++G    G+LG  + D  SQ  PK+++GL+ +  + A        
Sbjct: 86  GTNHSLALTKSGDVYSFGFGLFGRLGHGNTD--SQLEPKKIEGLSDIQAIAA-------- 135

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G +HSLAL   G+V+++G   +G  GL   + + QS PK+++ L+ V  +   A
Sbjct: 136 ------GDFHSLALTKSGDVYSFG---NGTSGLGHGNTEDQSTPKKIESLSDVQAI--AA 184

Query: 123 GYSHCLVLTSSGVV---------TCTHKENGCGSDPSQ-----GVQSNLVQDSHTTITSL 168
           G +H L LT SG V            H +     +P +      +Q+     +H+   +L
Sbjct: 185 GGNHSLALTKSGDVYSFGFGLFGRLGHGDTDSQLEPKKIEDLSDIQAIAAGGNHS--LAL 242

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
              G++Y++G   +GQ+G  ++   +T P+++E L +  I  +A GANHS  L+KS   +
Sbjct: 243 TKSGDVYSFGWGLHGQLGHGDTENQLT-PKKIEDLSD--IQAVAAGANHSLALTKS-GEV 298

Query: 229 YAFGIGSAVQLDSPKSVHK-TPQLIHG 254
           Y+FG G+  QL    +  + TP+ I G
Sbjct: 299 YSFGRGNTGQLGHGDTDDQLTPKKIEG 325



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 126/273 (46%), Gaps = 69/273 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL   G+V+++G   +G  GL   + + QS PK+++ L+ V  +   AG +H L
Sbjct: 136 GDFHSLALTKSGDVYSFG---NGTSGLGHGNTEDQSTPKKIESLSDVQAI--AAGGNHSL 190

Query: 63  VLTSTTGLW--------------------------------------HSLALNDCGEVFT 84
            LT +  ++                                      HSLAL   G+V++
Sbjct: 191 ALTKSGDVYSFGFGLFGRLGHGDTDSQLEPKKIEDLSDIQAIAAGGNHSLALTKSGDVYS 250

Query: 85  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN- 143
           +G   HGQLG    D ++Q  PK+++ L+ +  V   AG +H L LT SG V    + N 
Sbjct: 251 FGWGLHGQLG--HGDTENQLTPKKIEDLSDIQAV--AAGANHSLALTKSGEVYSFGRGNT 306

Query: 144 ---GCGSDPSQ----------GVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNS 190
              G G    Q           +Q+    D H+   +L   G++Y++GN   G  G+ + 
Sbjct: 307 GQLGHGDTDDQLTPKKIEGLKDIQAIAAGDFHSL--ALTKSGDVYSFGN---GTSGLGHG 361

Query: 191 NTTVT-KPQRVESLVNLPIALIACGANHSFVLS 222
           +T    +P+++E L +  I  IA GANHS  L+
Sbjct: 362 DTANQLEPKKIEGLTD--IQAIAAGANHSLALA 392



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 19/128 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL   GEV+++G    GQLG    D   Q  PK+++GL  +  + A        
Sbjct: 285 GANHSLALTKSGEVYSFGRGNTGQLG--HGDTDDQLTPKKIEGLKDIQAIAA-------- 334

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G +HSLAL   G+V+++G   +G  GL   D  +Q  PK+++GL  +  + A A
Sbjct: 335 ------GDFHSLALTKSGDVYSFG---NGTSGLGHGDTANQLEPKKIEGLTDIQAIAAGA 385

Query: 123 GYSHCLVL 130
            +S  L +
Sbjct: 386 NHSLALAV 393


>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3089

 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 115/236 (48%), Gaps = 38/236 (16%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+++ GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 528 AGYRHSAAVSEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 583

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK V+ L  + + + C
Sbjct: 584 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVVEALQGMFIRKVC 630

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT--------- 166
           AG    L LTS+G V       C     GCGS  +  ++  L+++  TT           
Sbjct: 631 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELATTRVVDISIGDSH 686

Query: 167 --SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
             +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 687 CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVVGLDGVAIQQISAGTSHSLA 742



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 120/296 (40%), Gaps = 83/296 (28%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV-----KGLASVSVVQACA 56
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++     + +  VS  +   
Sbjct: 420 AGQYCTFVISSDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRAIKKVSSSKGSD 477

Query: 57  GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASV 115
           G              H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L   
Sbjct: 478 G--------------HTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGK 521

Query: 116 SVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELY 175
            VV   AGY H   ++  G                                      ELY
Sbjct: 522 VVVCVSAGYRHSAAVSEDG--------------------------------------ELY 543

Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
           TWG  ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G 
Sbjct: 544 TWGEGDFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG- 599

Query: 236 AVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
               D+ K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 600 ----DNGKLGHGDTNRVYKPKVVEALQ-------------GMFIRKVCAGSQSSLA 638



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  VV    G SHC
Sbjct: 631 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELATTRVVDISIGDSHC 687

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  V++ Q  
Sbjct: 688 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVVGLDGVAIQQIS 734

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 735 AGTSHSLAWTA 745



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 42/236 (17%)

Query: 31  SADKKSQSIPKRV-KGLASV---------SVVQACAGYSHCLVLTSTTGLWHSLALNDCG 80
           +AD+     P R  +GL S+          V +  + YS   V   +     +  +++  
Sbjct: 323 AADRSQWREPTRTSEGLCSLYEAALCLFEEVCRMASDYSRTCVSPDSIQTGEAPVVSETC 382

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
           EV+ WG ++  QL   + +K  Q  PK     A    ++  AG     V++S G V    
Sbjct: 383 EVYVWGSNSSHQLVEGTQEKILQ--PKLAATFADAQTIE--AGQYCTFVISSDGSVRACG 438

Query: 141 KEN----GCGSDPSQGVQSNLVQDSHTTITSLNSP-------------GELYTWGNNEYG 183
           K +    G G   +Q     L  + H  I  ++S              GE+++WG+ +YG
Sbjct: 439 KGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 498

Query: 184 QMGINNSNTTVTKPQRVESLVNLP-----IALIACGANHSFVLSKSVSRLYAFGIG 234
           ++G  NS+T     Q+   L+  P     +  ++ G  HS  +S+    LY +G G
Sbjct: 499 KLGHGNSST-----QKYPKLIQGPLQGKVVVCVSAGYRHSAAVSED-GELYTWGEG 548


>gi|348665005|gb|EGZ04841.1| hypothetical protein PHYSODRAFT_535457 [Phytophthora sojae]
          Length = 755

 Score =  103 bits (258), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 95/158 (60%), Gaps = 22/158 (13%)

Query: 938  LCNYPFIFDAKAKTTLLEMD----QRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSR 993
             C++PF+ DA +K+ +L++D    QR + + A+  +   L +++      + YL ++V R
Sbjct: 357  FCDFPFVLDAASKSKVLQIDSDLEQRARAQDAVLSSRSMLAMES----APSPYLVLKVRR 412

Query: 994  DNIVEDTIRELAQYTTN--DFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLL 1051
            DNIVED +++L   +++    KKPLKV            KF GEE  D GGV++EF  ++
Sbjct: 413  DNIVEDAMQQLVHLSSSAETLKKPLKV------------KFVGEEGIDEGGVQKEFFQIV 460

Query: 1052 LKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            ++++L+P YGMF   EETR++WF+ D+ E    + LIG
Sbjct: 461  IRQLLNPAYGMFTYDEETRTLWFNSDSLEATMEFELIG 498



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 61/99 (61%), Gaps = 2/99 (2%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y EETR++WF+ D+ E      LIGTL  LAIYN  I+++ FP  +YKK++   +
Sbjct: 469 YGMFTYDEETRTLWFNSDSLEATMEFELIGTLLALAIYNAVILDVSFPHIVYKKLMGCSL 528

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
            L+DL+   P L + L+ +L++ + D+E V+   F   Y
Sbjct: 529 GLEDLELALPDLGRGLRQLLNF-QGDVEGVYQRNFEYSY 566


>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
          Length = 4870

 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               SL+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4102 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4159

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4160 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4205

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4206 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4228

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4229 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4286

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G+V++ +  G +H++ 
Sbjct: 4287 NHNRPQQI--PVLA-----------------GVVIEDVAVGAEHTLA 4314



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4055 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4103

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4104 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4161

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4162 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4183

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4184 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 4242



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4151 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4208

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4209 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4255

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
            G    + LT  G V    ++   G         + P Q     GV    V        +L
Sbjct: 4256 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4315

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
             S G++Y WG+N  GQ+G+ ++N  V +P  V  L    I  I+ G  HS   +      
Sbjct: 4316 ASTGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPP 4374

Query: 229  YAFGIGSAVQLDSPKSV 245
             A G+   +QL  P +V
Sbjct: 4375 RAPGVSVPLQLGLPDAV 4391



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L L+               EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 LSLSHDN------------EVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
           norvegicus]
          Length = 4859

 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               SL+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4148

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4149 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4194

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4195 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4217

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4218 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4275

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G+V++ +  G +H++ 
Sbjct: 4276 NHNRPQQI--PVLA-----------------GVVIEDVAVGAEHTLA 4303



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4044 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4092

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4093 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4150

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4151 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4172

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4173 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 4231



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4140 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4197

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4198 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4244

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
            G    + LT  G V    ++   G         + P Q     GV    V        +L
Sbjct: 4245 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4304

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
             S G++Y WG+N  GQ+G+ ++N  V +P  V  L    I  I+ G  HS   +      
Sbjct: 4305 ASTGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPP 4363

Query: 229  YAFGIGSAVQLDSPKSV 245
             A G+   +QL  P +V
Sbjct: 4364 RAPGVSVPLQLGLPDAV 4380



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L L+               EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 LSLSHDN------------EVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
           norvegicus]
          Length = 4859

 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               SL+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4148

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4149 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4194

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4195 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4217

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4218 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4275

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G+V++ +  G +H++ 
Sbjct: 4276 NHNRPQQI--PVLA-----------------GVVIEDVAVGAEHTLA 4303



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4044 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4092

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4093 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4150

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4151 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4172

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4173 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 4231



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4140 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4197

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4198 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4244

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
            G    + LT  G V    ++   G         + P Q     GV    V        +L
Sbjct: 4245 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4304

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
             S G++Y WG+N  GQ+G+ ++N  V +P  V  L    I  I+ G  HS   +      
Sbjct: 4305 ASTGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPP 4363

Query: 229  YAFGIGSAVQLDSPKSV 245
             A G+   +QL  P +V
Sbjct: 4364 RAPGVSVPLQLGLPDAV 4380



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L L+               EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 LSLSHDN------------EVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Cricetulus griseus]
          Length = 4859

 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               SL+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4148

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4149 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4194

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4195 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4217

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4218 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4275

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G+V++ +  G +H++ 
Sbjct: 4276 NHNRPQQI--PVLA-----------------GVVIEDVAVGAEHTLA 4303



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4044 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4092

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4093 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4150

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4151 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4172

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4173 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 4231



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4140 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4197

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4198 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4244

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
            G    + LT  G V    ++   G         + P Q     GV    V        +L
Sbjct: 4245 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4304

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
             S G++Y WG+N  GQ+G+ ++N  V +P  V  L    I  I+ G  HS   +      
Sbjct: 4305 ASTGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPP 4363

Query: 229  YAFGIGSAVQLDSPKSV 245
             A G+   +QL  P +V
Sbjct: 4364 RAPGVSVPLQLGLPDTV 4380



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L L+               EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 LSLSHDN------------EVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
          Length = 4859

 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               SL+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4148

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4149 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4194

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4195 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4217

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4218 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4275

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G+V++ +  G +H++ 
Sbjct: 4276 NHNRPQQI--PVLA-----------------GVVIEDVAVGAEHTLA 4303



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4044 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4092

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4093 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4150

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4151 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4172

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4173 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 4231



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4140 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4197

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4198 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4244

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
            G    + LT  G V    ++   G         + P Q     GV    V        +L
Sbjct: 4245 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4304

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
             S G++Y WG+N  GQ+G+ ++N  V +P  V  L    I  I+ G  HS   +      
Sbjct: 4305 ASTGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPP 4363

Query: 229  YAFGIGSAVQLDSPKSV 245
             A G+   +QL  P +V
Sbjct: 4364 RAPGVSVPLQLGLPDAV 4380



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L L+               EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 LSLSHDN------------EVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|17510153|ref|NP_490834.1| Protein HERC-1 [Caenorhabditis elegans]
 gi|351051254|emb|CCD73459.1| Protein HERC-1 [Caenorhabditis elegans]
          Length = 1019

 Score =  103 bits (257), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 138/286 (48%), Gaps = 58/286 (20%)

Query: 812  TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
                W+  +S  +F R++ +FK  +  +L+      +  G     R     + ++QKL S
Sbjct: 526  ALEKWWTQLSTRHFRRMVTVFKTAIKAMLK------AKKGP----RDCHKFILIMQKL-S 574

Query: 872  LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGR-P 930
            L N+T                         +    FY+ +L T  D++++Y   ++ + P
Sbjct: 575  LINKTY----------------------HIIPLETFYIDELNTSVDLKLEYVLELTRQDP 612

Query: 931  NGSTRDFLCNYPFIFDAKAKTTLLEMD----QRIQMEHAMNQTNFYLFLQTFNPHTLNQY 986
            N +  D+  ++PF+ +  AK  L+ ++    Q ++ + ++  T     +    PH     
Sbjct: 613  NKTELDYWTHFPFLLNGVAKGELIFVEAWLMQTLRRQSSLFNTAHGTIIFEL-PH----- 666

Query: 987  LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
            LE+ V R+ IV DT+ ++A  + +D +KPLKVN              GE+A+DAGGVR+E
Sbjct: 667  LELTVRREFIVSDTMNQMAGLSESDLQKPLKVN------------IAGEDADDAGGVRKE 714

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFS--EDTFEDQNMYFLIGK 1090
            F +L++++IL   YGMF E EE+  +WFS     F D+  +  +G+
Sbjct: 715  FFILVMRKILQSDYGMFSEDEESHLVWFSGLPSEFCDREQFHQLGR 760



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 135/298 (45%), Gaps = 46/298 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++ L   G++++ G +  GQLG  S  + S SI   V   +S  ++Q  AG SH +
Sbjct: 49  GEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYP-VSWTSSAKIIQISAGRSHTV 107

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T            D G VF WG + HGQLG+ES     Q  P+RV+ +    +VQ  +
Sbjct: 108 SVT------------DDGRVFAWGSNEHGQLGMESK-FTWQGTPRRVQEIN--DIVQVAS 152

Query: 123 GYSHCLVLTSSGVV---------TCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGE 173
           G +HC+ L   G V          C H+      +   GV    V        +L++ G 
Sbjct: 153 GSNHCIALDEGGRVFVWGEQADGRCIHRPEPV--EQLSGVPIVRVLAGARHCLALSASGA 210

Query: 174 LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
           ++TWG N  G++GI++     T  Q V  +  L +   ACG NH+ +L+    R ++FG 
Sbjct: 211 VFTWGQNNSGELGIDDLRPQ-TSVQHVHQMDGLGVVEAACGDNHTVLLTH-CGRTFSFGS 268

Query: 234 GSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
            +  Q    K V K           +P A++   D + SH     V +I +G  H+I 
Sbjct: 269 DALGQCGFGKKVEKR---------TNPTAVS---DLIGSH-----VTRIAAGACHTIA 309



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 47/97 (48%), Positives = 65/97 (67%), Gaps = 3/97 (3%)

Query: 720 YGI-TEYEETRSIWFS--EDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDE 776
           YG+ +E EE+  +WFS     F D+     +G L GL+IYN++I+  PFPLALYK +LD 
Sbjct: 728 YGMFSEDEESHLVWFSGLPSEFCDREQFHQLGRLVGLSIYNHSIVPFPFPLALYKYLLDT 787

Query: 777 PILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           P  L+DL +LSP+  K L+ +L Y E D+EDVFG+ F
Sbjct: 788 PPDLEDLCELSPSEGKGLKMLLSYEEDDVEDVFGLNF 824



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 15/130 (11%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           + G  H LAL+  G VFTWG +  G+LG++  D + Q+  + V  +  + VV+A  G +H
Sbjct: 196 LAGARHCLALSASGAVFTWGQNNSGELGID--DLRPQTSVQHVHQMDGLGVVEAACGDNH 253

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
            ++LT             CG  F++G D  GQ G     +K ++ P  V  L    V + 
Sbjct: 254 TVLLTH------------CGRTFSFGSDALGQCGFGKKVEK-RTNPTAVSDLIGSHVTRI 300

Query: 121 CAGYSHCLVL 130
            AG  H + +
Sbjct: 301 AAGACHTIAI 310


>gi|326432295|gb|EGD77865.1| ITCH protein [Salpingoeca sp. ATCC 50818]
          Length = 1207

 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 139/317 (43%), Gaps = 59/317 (18%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           GL  S+ ++  G+V+TWGG   GQLGL   A +    +P+ VKGL +  V+    G  HC
Sbjct: 93  GLDFSVVVDSTGKVYTWGGGERGQLGLGREAMETGSRVPRPVKGLGNAFVISVACGTRHC 152

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L LT              G VF+WG    GQLG       S+  P+ +  L    VV   
Sbjct: 153 LALTRD------------GRVFSWGEGADGQLG--DGQFVSRHSPEVIADLRGKGVVSVA 198

Query: 122 AGYSHCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLV------QDSHTTITSLNS- 170
           AG ++ L +T +  V    + +  + G G D +   +  LV      Q  H T    ++ 
Sbjct: 199 AGSTYSLAVTGADQVYAFGSNSKGQLGVG-DTTARFRPTLVRFLDGKQVCHVTAGDFHTL 257

Query: 171 ----PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL-IACGANHSFVLSKSV 225
                G LY WG+N++GQ+G+ +   +V  P  +  ++ +   L ++ G  H+  L ++V
Sbjct: 258 ARTRTGHLYAWGSNQWGQLGLGSEADSVAAPTEITHILEIGRVLEVSAGRRHTVALIRTV 317

Query: 226 SR-------LYAFGIGSAVQL----DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHS 274
           +          AFG  +  QL    D P S  K  QL H      PV +           
Sbjct: 318 TETGAQATVAVAFGANNTGQLGLDPDHPAS--KRTQLFH------PVRL--------KRI 361

Query: 275 GGLVVKKIYSGGDHSIV 291
             +   K+ +GG+H+I+
Sbjct: 362 SSMHPIKLIAGGNHTIM 378



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 133/314 (42%), Gaps = 49/314 (15%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           TG +HSLA+   G V+T G +   QLG  S D+   +   RV  L +++ V    G    
Sbjct: 42  TGYYHSLAITRSGTVYTTGKNDRRQLG-RSGDEHKWA---RVTPLETITAVAGAVGLDFS 97

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKGLASVSVVQA 120
           +V+ ST            G+V+TWGG   GQLGL   A +    +P+ VKGL +  V+  
Sbjct: 98  VVVDST------------GKVYTWGGGERGQLGLGREAMETGSRVPRPVKGLGNAFVISV 145

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPG-------- 172
             G  HCL LT  G V       G G+D   G    + + S   I  L   G        
Sbjct: 146 ACGTRHCLALTRDGRVFSW----GEGADGQLGDGQFVSRHSPEVIADLRGKGVVSVAAGS 201

Query: 173 ----------ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
                     ++Y +G+N  GQ+G+ ++ T   +P  V  L    +  +  G  H+   +
Sbjct: 202 TYSLAVTGADQVYAFGSNSKGQLGVGDT-TARFRPTLVRFLDGKQVCHVTAGDFHTLART 260

Query: 223 KSVSRLYAFGIGSAVQL---DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVV 279
           ++   LYA+G     QL       SV    ++ H   I   + ++AG    V+     ++
Sbjct: 261 RT-GHLYAWGSNQWGQLGLGSEADSVAAPTEITHILEIGRVLEVSAGRRHTVA-----LI 314

Query: 280 KKIYSGGDHSIVTV 293
           + +   G  + V V
Sbjct: 315 RTVTETGAQATVAV 328



 Score = 70.9 bits (172), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 36/231 (15%)

Query: 82  VFTWGGDTHGQLGLESADKKSQS----IPKRVKGLASVSVVQACAGYSHCLVLTSSGVVT 137
           V  WG    GQLG+  AD   ++    +P   + LA V+      GY H L +T SG V 
Sbjct: 3   VAVWGATGAGQLGIGDADGTGKTRVTLVPSLEQELAFVAT-----GYYHSLAITRSGTVY 57

Query: 138 CTHKEN----GCGSDPSQGVQSNLVQDSHTTITS------------LNSPGELYTWGNNE 181
            T K +    G   D  +  +   ++    TIT+            ++S G++YTWG  E
Sbjct: 58  TTGKNDRRQLGRSGDEHKWARVTPLE----TITAVAGAVGLDFSVVVDSTGKVYTWGGGE 113

Query: 182 YGQMGINNS--NTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
            GQ+G+      T    P+ V+ L N  +  +ACG  H   L++   R++++G G+  QL
Sbjct: 114 RGQLGLGREAMETGSRVPRPVKGLGNAFVISVACGTRHCLALTRD-GRVFSWGEGADGQL 172

Query: 240 DSPKSVHK-TPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHS 289
              + V + +P++I        V++ AG    ++ +G     ++Y+ G +S
Sbjct: 173 GDGQFVSRHSPEVIADLRGKGVVSVAAGSTYSLAVTG---ADQVYAFGSNS 220



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 5/90 (5%)

Query: 729 RSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL-----DEPILLQDL 783
           R  WFS  T E       +G L GLA++N  +++  FP   YK +L      + + L DL
Sbjct: 807 RWFWFSTPTAERLKAYHAMGLLFGLALHNSVLVDPLFPKVFYKMLLVDLSKGDALTLDDL 866

Query: 784 KDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +  +P +A+ L+ +L+Y   D  DVFG+TF
Sbjct: 867 ETAAPEVARGLRQLLEYDRQDERDVFGLTF 896


>gi|55832768|gb|AAV66897.1| truncated HERC6 [Homo sapiens]
          Length = 322

 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 118/253 (46%), Gaps = 56/253 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q   G+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIMTLNDIKIIQVSCGH---- 137

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL+   +VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  A
Sbjct: 138 --------YHSLALSKDSQVFSWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H   L+             CG+                           + WG+N  
Sbjct: 189 GGAHSFALSL------------CGTS--------------------------FGWGSNSA 210

Query: 183 GQMGINNSNTTV--TKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           GQ+ ++  N  V   KP  V +L NL +  I+CG  H+ VL++   +++ FG   + QL 
Sbjct: 211 GQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQD-GKVFTFGDNRSGQLG 269

Query: 241 -SPKSVHKTPQLI 252
            SP    + PQL+
Sbjct: 270 YSPTPEKRGPQLV 282



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 54/238 (22%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L     V + G ++ GQLG   A +    +P+ ++ L ++            
Sbjct: 30  SGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGE--LPEPIQALETL------------ 75

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           +V   + G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q  
Sbjct: 76  IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIMTLNDIKIIQVS 134

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H L L+                           +DS           ++++WG N 
Sbjct: 135 CGHYHSLALS---------------------------KDS-----------QVFSWGKNS 156

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           +GQ+G+     +   PQRV SL  +P+A +A G  HSF LS   +  + +G  SA QL
Sbjct: 157 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTS-FGWGSNSAGQL 213


>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
          Length = 4871

 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK V+ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVVEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4102 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4159

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4160 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4205

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4206 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4228

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4229 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4286

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G+V++ +  G +H++ 
Sbjct: 4287 NHNRPQQI--PVLA-----------------GVVIEDVAVGAEHTLA 4314



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4055 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4103

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4104 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4161

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4162 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4183

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4184 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 4242



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4151 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4208

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4209 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4255

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
            G    + LT  G V    ++   G         + P Q     GV    V        +L
Sbjct: 4256 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4315

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
             S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +      
Sbjct: 4316 ASTGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPP 4374

Query: 229  YAFGIGSAVQLDSPKSV 245
             A G+   +QL  P +V
Sbjct: 4375 RAPGVSVPLQLGLPDAV 4391



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVVEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Equus caballus]
          Length = 4860

 Score =  103 bits (256), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  LV+             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLVEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 75/290 (25%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4149

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4150 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4195

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4196 HTLAVSTDGSM-------------------------------------VWAFGDGDYGKL 4218

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4219 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4276

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
             H  PQ I  P +A                 G+V++ +  G +H++   +
Sbjct: 4277 NHNRPQQI--PVLA-----------------GVVIEDVAVGAEHTLALAS 4307



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4045 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4093

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4094 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4151

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4152 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4173

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4174 KL-PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 4232



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4141 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4198

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4199 AVST-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4245

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
            G    + LT  G V    ++   G         + P Q     GV    V        +L
Sbjct: 4246 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4305

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
             S G++Y WG+N  GQ+G+ ++N  V +P  V  L    I  I+ G  HS   +      
Sbjct: 4306 ASNGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPP 4364

Query: 229  YAFGIGSAVQLDSPKSV 245
             A G+   +QL  P +V
Sbjct: 4365 RAPGVSVPLQLGLPDAV 4381



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 60.8 bits (146), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK V+ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLVEELAATRIVDISIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2440

 Score =  103 bits (256), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDVSIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1 [Felis catus]
          Length = 4861

 Score =  103 bits (256), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK V+ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVVEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 75/290 (25%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4151 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4196

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4197 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4219

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4220 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4277

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
             H  PQ I  P +A                 G+V++ +  G +H++   +
Sbjct: 4278 NHNRPQQI--PVLA-----------------GVVIEDVAVGAEHTLALAS 4308



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4046 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4094

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4095 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4152

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4153 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4174

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4175 KL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 4233



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4142 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4199

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4200 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4246

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
            G    + LT  G V    ++   G         + P Q     GV    V        +L
Sbjct: 4247 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4306

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
             S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +      
Sbjct: 4307 ASTGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPP 4365

Query: 229  YAFGIGSAVQLDSPKSV 245
             A G+   +QL  P +V
Sbjct: 4366 RAPGVSVPLQLGLPDAV 4382



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVVEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
           [Ornithorhynchus anatinus]
          Length = 4866

 Score =  103 bits (256), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  LV+             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLVEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLA 732



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 133/294 (45%), Gaps = 76/294 (25%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4098 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4155

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            +             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4156 AD------------GKMFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4201

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4202 HTLAVSTDGSM-------------------------------------VWAFGDGDYGKL 4224

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4225 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4282

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSD 298
             H  PQ +  P +A                 G+V++ +  G +H++  +T + D
Sbjct: 4283 NHNRPQQV--PVLA-----------------GVVIEDVAVGAEHTLA-ITSTGD 4316



 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4051 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4099

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T+ 
Sbjct: 4100 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTAD 4157

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+++T+GN +YG++G+ N++  
Sbjct: 4158 --------------------------------------GKMFTFGNGDYGRLGLGNTSNK 4179

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4180 KL-PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 4238



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 30/257 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4147 GFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4204

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4205 AVST-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4251

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
            G    + LT  G V    ++   G         + P Q     GV    V        ++
Sbjct: 4252 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAI 4311

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
             S G++Y WG+N  GQ+G+ ++N  V +P  +  L    I  I+ G  HS   +      
Sbjct: 4312 TSTGDVYAWGSNSEGQLGLGHTN-HVREPTLITVLQGKNIRQISAGRCHSAAWTAPPVPP 4370

Query: 229  YAFGIGSAVQLDSPKSV 245
             A G+   +QL  P  +
Sbjct: 4371 RAPGVSVPLQLGLPDGI 4387



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK V+ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLVEELAATRIVDISIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  V++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGVAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|149043904|gb|EDL97355.1| rCG61079, isoform CRA_d [Rattus norvegicus]
          Length = 245

 Score =  103 bits (256), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 55/222 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL+ +++  + +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLQGSEECIR-VPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +                                       E++ WG N+Y
Sbjct: 145 GYYHSLALSKAS--------------------------------------EVFCWGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S
Sbjct: 167 GQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS 208



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 52/186 (27%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LALND G+V+ WG D+ GQLGL+ +++  + +P+ +K L+ + +VQ   GY       
Sbjct: 95  HTLALNDKGQVYAWGLDSDGQLGLQGSEECIR-VPRNIKSLSDIQIVQVACGY------- 146

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                +HSLAL+   EVF WG + +GQLGL   + + Q+ P+ +K L  +  +Q  AG +
Sbjct: 147 -----YHSLALSKASEVFCWGQNKYGQLGL-GIECQKQTSPQLIKSLLGIPFMQVAAGGA 200

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           H  VLT SG +                                      + WG N++GQ+
Sbjct: 201 HSFVLTLSGAI--------------------------------------FGWGRNKFGQL 222

Query: 186 GINNSN 191
           G+N+ N
Sbjct: 223 GLNDEN 228



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 13/99 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+   EVF WG + +GQLGL   + + Q+ P+ +K L  +  +Q  AG +H  
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGL-GIECQKQTSPQLIKSLLGIPFMQVAAGGAHSF 203

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKK 101
           VLT +            G +F WG +  GQLGL   + +
Sbjct: 204 VLTLS------------GAIFGWGRNKFGQLGLNDENGR 230


>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Ailuropoda melanoleuca]
          Length = 4861

 Score =  103 bits (256), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK V+ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVVEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4151 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4196

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4197 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4219

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4220 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4277

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G+V++ +  G +H++ 
Sbjct: 4278 NHNRPQQI--PVLA-----------------GVVIEDVAVGAEHTLA 4305



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4046 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4094

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4095 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4152

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4153 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4174

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4175 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 4233



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4142 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4199

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4200 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4246

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
            G    + LT  G V    ++   G         + P Q     GV    V        +L
Sbjct: 4247 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4306

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
             S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +      
Sbjct: 4307 ASTGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPP 4365

Query: 229  YAFGIGSAVQLDSPKSV 245
             A G+   +QL  P +V
Sbjct: 4366 RAPGVSVPLQLGLPDAV 4382



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVVEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 60.1 bits (144), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
           niloticus]
          Length = 4936

 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 115/236 (48%), Gaps = 38/236 (16%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+++ GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 525 AGYRHSAAVSEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 580

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK V+ L  + + + C
Sbjct: 581 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVVEALQGMFIRKVC 627

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT--------- 166
           AG    L LTS+G V       C     GCGS  +  ++  L+++  TT           
Sbjct: 628 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELATTRVVDISIGDSH 683

Query: 167 --SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
             +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 684 CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAGTSHSLA 739



 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 119/250 (47%), Gaps = 56/250 (22%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4168 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4225

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            +             G++FT+G   +G+LGL +   K   +P++V  L    V Q   G +
Sbjct: 4226 AD------------GKLFTFGNGDYGRLGLGNTSNK--KLPEKVTALEGYHVGQVACGLN 4271

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H LV+++ G++                                     ++ +G+ +YG++
Sbjct: 4272 HTLVVSADGMM-------------------------------------VWAFGDGDYGKL 4294

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K   +++ FG    + L   ++ 
Sbjct: 4295 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GKVFTFGQDRLIGLPEGRAR 4352

Query: 246  -HKTPQLIHG 254
             H  PQ + G
Sbjct: 4353 NHNRPQQVPG 4362



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4121 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4169

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T+ 
Sbjct: 4170 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTAD 4227

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4228 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4249

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P++V +L    +  +ACG NH+ V+S     ++AFG G   +L    S  K +PQ +
Sbjct: 4250 -KLPEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQKV 4308



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 34/259 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P++V  L    V Q   G +H L
Sbjct: 4217 GFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNK--KLPEKVTALEGYHVGQVACGLNHTL 4274

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            V+++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4275 VVSA-----------DGMMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4321

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ--GVQSNLVQD-----SHTTIT 166
            G    + LT  G V    ++   G         + P Q  G+    +QD      HT + 
Sbjct: 4322 GTQFSVALTKDGKVFTFGQDRLIGLPEGRARNHNRPQQVPGLSGIHIQDVAVGAEHTLV- 4380

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
             L+S G++YTWG+N  GQ+G+ ++N  V +P  V +L    I  I+ G  HS   +    
Sbjct: 4381 -LSSTGDVYTWGSNSEGQLGLGHTN-HVREPTLVTTLQGKNIHQISAGRCHSAAWTAPSV 4438

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G    +QL  P +V
Sbjct: 4439 PPRAPGSSVPLQLGLPAAV 4457



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 120/296 (40%), Gaps = 83/296 (28%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV-----KGLASVSVVQACA 56
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++     + +  VS  +   
Sbjct: 417 AGQYCTFVISSDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRAIKKVSSSKGSD 474

Query: 57  GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASV 115
           G              H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L   
Sbjct: 475 G--------------HTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGK 518

Query: 116 SVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELY 175
            VV   AGY H   ++  G                                      ELY
Sbjct: 519 VVVCVSAGYRHSAAVSEDG--------------------------------------ELY 540

Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
           TWG  ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G 
Sbjct: 541 TWGEGDFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG- 596

Query: 236 AVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
               D+ K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 597 ----DNGKLGHGDTNRVYKPKVVEALQ-------------GMFIRKVCAGSQSSLA 635



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  VV    G SHC
Sbjct: 628 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELATTRVVDISIGDSHC 684

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  V++ Q  
Sbjct: 685 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVIGLDGVAIQQIS 731

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 732 AGTSHSLAWTA 742



 Score = 53.9 bits (128), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 97/236 (41%), Gaps = 42/236 (17%)

Query: 31  SADKKSQSIPKRVK-GLASV---------SVVQACAGYSHCLVLTSTTGLWHSLALNDCG 80
           SAD+     P R   GL S+          V +  + YS   V   +     +  +++  
Sbjct: 320 SADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCVSPDSIQTGETPVVSETC 379

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
           EV+ WG ++  QL   + +K  Q  PK     A    ++  AG     V++S G V    
Sbjct: 380 EVYVWGSNSSHQLVEGTQEKILQ--PKLASSFADAQTIE--AGQYCTFVISSDGSVRACG 435

Query: 141 KEN----GCGSDPSQGVQSNLVQDSHTTITSLNSP-------------GELYTWGNNEYG 183
           K +    G G   +Q     L  + H  I  ++S              GE+++WG+ +YG
Sbjct: 436 KGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 495

Query: 184 QMGINNSNTTVTKPQRVESLVNLP-----IALIACGANHSFVLSKSVSRLYAFGIG 234
           ++G  NS+T     Q+   L+  P     +  ++ G  HS  +S+    LY +G G
Sbjct: 496 KLGHGNSST-----QKYPKLIQGPLQGKVVVCVSAGYRHSAAVSED-GELYTWGEG 545


>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
          Length = 4850

 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 75/290 (25%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4082 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4139

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4140 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4185

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4186 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4208

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4209 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4266

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
             H  PQ I  P +A                 G+V++ +  G +H++   +
Sbjct: 4267 NHNRPQQI--PVLA-----------------GVVIEDVAVGAEHTLALAS 4297



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4035 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4083

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4084 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4141

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4142 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4163

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4164 KL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 4222



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4131 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4188

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4189 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4235

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
            G    + LT  G V    ++   G         + P Q     GV    V        +L
Sbjct: 4236 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4295

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
             S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +      
Sbjct: 4296 ASTGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPP 4354

Query: 229  YAFGIGSAVQLDSPKSV 245
             A G+   +QL  P +V
Sbjct: 4355 RAPGVSVPLQLGLPDAV 4371



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
 gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
          Length = 395

 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 130/266 (48%), Gaps = 35/266 (13%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +SLA+ + G++FTWG +  G LG    + K+++IP +VK LA+  +VQA           
Sbjct: 50  NSLAICEDGKLFTWGWNQRGTLG-HPPETKTENIPSQVKALANAKIVQA----------- 97

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADK--------KSQSIPKRVKGLASVSV 117
              G WH LA++D G  + WGG+ +GQ G E   K        +  +IP+R    + +SV
Sbjct: 98  -AIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDITIPQRCA--SKLSV 154

Query: 118 VQACAGYSHCLVLTSSGVVTCTHKENGCG-----SDP--SQGVQS-NLVQDSHTTITSLN 169
            Q  AG +H +VLT  G V    +    G     S P   QG++   L+        +L 
Sbjct: 155 RQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRLIAVGAFHNLALL 214

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G L+ WGNNEYGQ+G  ++    ++P  V+ L +L +  IA G  HS  L+     +Y
Sbjct: 215 EDGILWAWGNNEYGQLGTGDTQPR-SQPIAVQGLSDLTLVDIAAGGWHSTALTDD-GGVY 272

Query: 230 AFGIGSAVQL--DSPKSVHKTPQLIH 253
            +G G   +L     KS    PQ + 
Sbjct: 273 GWGRGEHGRLGFGDDKSSKMVPQKVQ 298



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 139/334 (41%), Gaps = 92/334 (27%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADK--------KSQSIPKRVKGLASVSVVQA 54
           G WH LA++D G  + WGG+ +GQ G E   K        +  +IP+R    + +SV Q 
Sbjct: 100 GGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDITIPQRCA--SKLSVRQV 157

Query: 55  CAGYSHCLVLTSTTGLW----------------------------------HSLALNDCG 80
            AG +H +VLT    +W                                  H+LAL + G
Sbjct: 158 AAGGTHSVVLTREGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRLIAVGAFHNLALLEDG 217

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
            ++ WG + +GQLG  + D + +S P  V+GL+ +++V   AG  H   LT  G V    
Sbjct: 218 ILWAWGNNEYGQLG--TGDTQPRSQPIAVQGLSDLTLVDIAAGGWHSTALTDDGGV---- 271

Query: 141 KENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRV 200
                                             Y WG  E+G++G  +  ++   PQ+V
Sbjct: 272 ----------------------------------YGWGRGEHGRLGFGDDKSSKMVPQKV 297

Query: 201 ESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASP 260
           + LV   I  I+CG  HS  L++   R+++FG G   +L   + V        G  +  P
Sbjct: 298 QLLVEENIVQISCGGTHSVALTRD-GRMFSFGRGDHGRLGYGRKV------TTGHPMEVP 350

Query: 261 VAMTAGEDSLVSHSGGLVVKKIYS-GGDHSIVTV 293
           + +    +   S +GG    K+ + GG H++  V
Sbjct: 351 INLPPATNLSGSGAGGHWCSKLVACGGRHTLAIV 384



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 101/244 (41%), Gaps = 69/244 (28%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           + +WG    GQLG+ + ++K             V  V+A A  + C V+  +    +SLA
Sbjct: 8   IISWGSGEDGQLGIGNNEEKEW-----------VCAVKALAAQNVCSVVAGSR---NSLA 53

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           + + G++FTWG +  G LG    + K+++IP +VK LA+  +VQA  G  HCL       
Sbjct: 54  ICEDGKLFTWGWNQRGTLG-HPPETKTENIPSQVKALANAKIVQAAIGGWHCL------- 105

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNT--- 192
                                          +++  G  Y WG NEYGQ G         
Sbjct: 106 -------------------------------AVDDQGRAYAWGGNEYGQCGEEPERKDDT 134

Query: 193 ------TVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI----GSAVQLDSP 242
                  +T PQR  S   L +  +A G  HS VL++    ++ +G     G   Q+ +P
Sbjct: 135 GRPLRRDITIPQRCAS--KLSVRQVAAGGTHSVVLTRE-GHVWTWGQPWPPGDIKQISTP 191

Query: 243 KSVH 246
             V 
Sbjct: 192 VRVQ 195


>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
          Length = 355

 Score =  102 bits (255), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 88/300 (29%), Positives = 135/300 (45%), Gaps = 55/300 (18%)

Query: 14  GEVFTWGGDTHGQLGL-ESADKKSQSIPKRVK-GLASVSVVQA--CAGYSHCLVLTSTTG 69
           G ++T+G     QLG  ++ D  +Q +P+ V+     +SVV    C G            
Sbjct: 66  GVLWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDG------------ 113

Query: 70  LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 129
             H  A+ + G V+TWG  T G+LG E  +     IP++V GL  +  V+   G+ H L 
Sbjct: 114 --HMAAVTEDGSVWTWGRGTFGRLGHEVHET---GIPEKVPGLDGMRFVKVACGHVHTLA 168

Query: 130 LTSSG-VVTCTHKENGC------GSDPSQGVQSNL------VQDSHTTITSLNSPGELYT 176
           LT  G V    + + GC      G+   Q ++S        +     +  +L++  E+YT
Sbjct: 169 LTDDGRVFAWGNNKTGCVGVSDRGTCAPQEIESLRGKKIIDISAGMESSAALSAEHEVYT 228

Query: 177 WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
           WG + YGQ+G+      +++P R+ +L N+PI  IACG  H   LS +   +YA+G G  
Sbjct: 229 WGADNYGQLGLGQGARYISQPTRIRTLRNVPIVQIACGQYHMLALS-AAGEVYAWGQGLQ 287

Query: 237 VQLDSPKSVHKT-PQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTK 295
            Q  + K V    P +I               D+L        VK I +GG HS V   K
Sbjct: 288 GQTANEKKVDTNIPHVI---------------DALKESR----VKMIAAGGSHSAVVDDK 328



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 70/267 (26%), Positives = 102/267 (38%), Gaps = 85/267 (31%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H  A+ + G V+TWG  T G+LG E  +     IP++V GL  +  V+   G+ H L LT
Sbjct: 114 HMAAVTEDGSVWTWGRGTFGRLGHEVHET---GIPEKVPGLDGMRFVKVACGHVHTLALT 170

Query: 66  S---------------------------------------TTGLWHSLALNDCGEVFTWG 86
                                                   + G+  S AL+   EV+TWG
Sbjct: 171 DDGRVFAWGNNKTGCVGVSDRGTCAPQEIESLRGKKIIDISAGMESSAALSAEHEVYTWG 230

Query: 87  GDTHGQLGL-ESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGC 145
            D +GQLGL + A   SQ  P R++ L +V +VQ   G  H L L+++            
Sbjct: 231 ADNYGQLGLGQGARYISQ--PTRIRTLRNVPIVQIACGQYHMLALSAA------------ 276

Query: 146 GSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVN 205
                                     GE+Y WG    GQ   N        P  +++L  
Sbjct: 277 --------------------------GEVYAWGQGLQGQTA-NEKKVDTNIPHVIDALKE 309

Query: 206 LPIALIACGANHSFVLSKSVSRLYAFG 232
             + +IA G +HS V+     RL+  G
Sbjct: 310 SRVKMIAAGGSHSAVVDDK-GRLFTVG 335



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 50/134 (37%), Positives = 65/134 (48%), Gaps = 19/134 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKGLASVSVVQ-ACAGYSH 60
           G+  S AL+   EV+TWG D +GQLGL + A   SQ  P R++ L +V +VQ AC     
Sbjct: 213 GMESSAALSAEHEVYTWGADNYGQLGLGQGARYISQ--PTRIRTLRNVPIVQIAC----- 265

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                   G +H LAL+  GEV+ WG    GQ   E   K   +IP  +  L    V   
Sbjct: 266 --------GQYHMLALSAAGEVYAWGQGLQGQTANEK--KVDTNIPHVIDALKESRVKMI 315

Query: 121 CAGYSHCLVLTSSG 134
            AG SH  V+   G
Sbjct: 316 AAGGSHSAVVDDKG 329


>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
           mulatta]
          Length = 4824

 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDVSIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 75/290 (25%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4056 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4113

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4114 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4159

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4160 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4182

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+++ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4183 GLGNS-TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4240

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
             H  PQ I  P +A                 G++++ +  G +H++   +
Sbjct: 4241 NHNRPQQI--PVLA-----------------GMIIEDVAVGAEHTLALAS 4271



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4009 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4057

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4058 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4115

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4116 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4137

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ I
Sbjct: 4138 KL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKI 4196



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 114/259 (44%), Gaps = 34/259 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4105 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4162

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P+++  L  + + +   
Sbjct: 4163 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKIDVLCGIGIKKVAC 4209

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN-----------LVQD-----SHTTIT 166
            G    + LT  G V    ++   G    +    N           +++D      HT   
Sbjct: 4210 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT--L 4267

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +    
Sbjct: 4268 ALASNGDVYAWGSNSEGQLGLGHTN-HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4326

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G+   +QL  P ++
Sbjct: 4327 PPRAPGVSVPLQLGLPDTL 4345



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 134/335 (40%), Gaps = 89/335 (26%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSD-- 298
           + K  H     ++ P +   +              G+ ++K+ +G   S+   +      
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 299 -------GVLSDDFRVLNP-------ATQILDVNF 319
                  G  S +   L P       AT+I+DV+ 
Sbjct: 638 WGCGACLGCGSSEATALRPKLIEELAATRIVDVSI 672



 Score = 60.8 bits (146), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
           rerio]
          Length = 4846

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 115/236 (48%), Gaps = 38/236 (16%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+++ GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 513 AGYRHSAAVSEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 568

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK V+ L  + + + C
Sbjct: 569 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVVEALQGMFIRKVC 615

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT--------- 166
           AG    L LTS+G V       C     GCGS  +  ++  L+++  TT           
Sbjct: 616 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELATTRVVDISIGDSH 671

Query: 167 --SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
             +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 672 CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAGTSHSLA 727



 Score = 99.0 bits (245), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 115/248 (46%), Gaps = 56/248 (22%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4078 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4135

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++F++G   +G+LGL +   K   +P+RV  L    V Q   G +
Sbjct: 4136 SD------------GKLFSFGNGDYGRLGLGNTSNK--KLPERVSALEGHQVGQVACGLN 4181

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G+                                      ++ +G+ +YG++
Sbjct: 4182 HTLAVSADGMT-------------------------------------VWAFGDGDYGKL 4204

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4205 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GNVYTFGQDRLIGLPEGRAR 4262

Query: 246  -HKTPQLI 252
             H  PQ +
Sbjct: 4263 NHNRPQQV 4270



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4031 GTVSACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQMVTSCGSDGHS 4079

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4080 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4137

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+++GN +YG++G+ N++  
Sbjct: 4138 --------------------------------------GKLFSFGNGDYGRLGLGNTSNK 4159

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    +  +ACG NH+  +S     ++AFG G   +L    S  K +PQ +
Sbjct: 4160 -KLPERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGNSTAKSSPQKV 4218



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 120/296 (40%), Gaps = 83/296 (28%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV-----KGLASVSVVQACA 56
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++     + +  VS  +   
Sbjct: 405 AGQYCTFVISSDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRAIKKVSSSKGSD 462

Query: 57  GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASV 115
           G              H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L   
Sbjct: 463 G--------------HTLAFTSEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGK 506

Query: 116 SVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELY 175
            VV   AGY H   ++  G                                      ELY
Sbjct: 507 VVVCVSAGYRHSAAVSEDG--------------------------------------ELY 528

Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
           TWG  ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G 
Sbjct: 529 TWGEGDFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG- 584

Query: 236 AVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
               D+ K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 585 ----DNGKLGHGDTNRVYKPKVVEALQ-------------GMFIRKVCAGSQSSLA 623



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 32/258 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++F++G   +G+LGL +   K   +P+RV  L    V Q   G +H L
Sbjct: 4127 GFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNK--KLPERVSALEGHQVGQVACGLNHTL 4184

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4185 AVSA-----------DGMTVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4231

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQD---------------SHTTITS 167
            G    + LT  G V    ++   G    +    N  Q                +  T+T 
Sbjct: 4232 GTQFSVALTKDGNVYTFGQDRLIGLPEGRARNHNRPQQVPALTGVFIEDVAVGAEHTLT- 4290

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
            L+S G++Y WG+N  GQ+G+ ++N  V +P  + +L    I  I+ G  HS   +     
Sbjct: 4291 LSSTGDVYAWGSNSEGQLGLGHTN-HVREPTLISALQGKNIQQISAGRCHSAAWTAPPVP 4349

Query: 228  LYAFGIGSAVQLDSPKSV 245
              A G    +QL  P  V
Sbjct: 4350 PRAPGSSVPLQLGLPVCV 4367



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  VV    G SHC
Sbjct: 616 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELATTRVVDISIGDSHC 672

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  V++ Q  
Sbjct: 673 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVIGLDGVAIQQIS 719

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 720 AGTSHSLAWTA 730


>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
           [Callithrix jacchus]
 gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
           [Callithrix jacchus]
          Length = 4860

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDVSIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4149

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4150 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4195

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4196 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4218

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4219 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4276

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ +  P +A                 G+V++ +  G +H++ 
Sbjct: 4277 NHNRPQQV--PVLA-----------------GVVIEDVAVGAEHTLA 4304



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4045 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4093

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4094 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4151

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4152 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4173

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4174 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 4232



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4141 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4198

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4199 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4245

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
            G    + LT  G V    ++   G         + P Q     GV    V        +L
Sbjct: 4246 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAL 4305

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
             S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +      
Sbjct: 4306 ASNGDVYAWGSNSEGQLGLGHTN-HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPVPP 4364

Query: 229  YAFGIGSAVQLDSPKSV 245
             A G+   +QL  P +V
Sbjct: 4365 RAPGVSVPLQLGLPDTV 4381



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 134/335 (40%), Gaps = 89/335 (26%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSD-- 298
           + K  H     ++ P +   +              G+ ++K+ +G   S+   +      
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 299 -------GVLSDDFRVLNP-------ATQILDVNF 319
                  G  S +   L P       AT+I+DV+ 
Sbjct: 638 WGCGACLGCGSSEATALRPKLIEELAATRIVDVSI 672



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4854

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDVSIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4086 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4143

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4144 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4189

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4190 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4212

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+++ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4213 GLGNS-TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4270

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G++++ +  G +H++ 
Sbjct: 4271 NHNRPQQI--PVLA-----------------GMIIEDVAVGAEHTLA 4298



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4039 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4087

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4088 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4145

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4146 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4167

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ I
Sbjct: 4168 KL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKI 4226



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 114/259 (44%), Gaps = 34/259 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4135 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4192

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P+++  L  + + +   
Sbjct: 4193 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKIDVLCGIGIKKVAC 4239

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN-----------LVQD-----SHTTIT 166
            G    + LT  G V    ++   G    +    N           +++D      HT   
Sbjct: 4240 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT--L 4297

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +    
Sbjct: 4298 ALASNGDVYAWGSNSEGQLGLGHTN-HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4356

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G+   +QL  P ++
Sbjct: 4357 PPRAPGVSVPLQLGLPDTL 4375



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 134/335 (40%), Gaps = 89/335 (26%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSD-- 298
           + K  H     ++ P +   +              G+ ++K+ +G   S+   +      
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 299 -------GVLSDDFRVLNP-------ATQILDVNF 319
                  G  S +   L P       AT+I+DV+ 
Sbjct: 638 WGCGACLGCGSSEATALRPKLIEELAATRIVDVSI 672



 Score = 60.8 bits (146), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4854

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDVSIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 129/290 (44%), Gaps = 75/290 (25%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4086 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4143

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4144 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4189

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L ++  G +                                     ++ +G+ +YG++
Sbjct: 4190 HTLAVSVDGSM-------------------------------------VWAFGDGDYGKL 4212

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+++ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4213 GLGNS-TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4270

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
             H  PQ I  P +A                 G++++ +  G +H++   +
Sbjct: 4271 NHNRPQQI--PVLA-----------------GVIIEDVAVGAEHTLALAS 4301



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4039 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4087

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4088 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4145

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4146 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4167

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ I
Sbjct: 4168 -KLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKI 4226



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 113/259 (43%), Gaps = 34/259 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4135 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4192

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             ++            D   V+ +G   +G+LGL ++  KS   P+++  L  + + +   
Sbjct: 4193 AVSV-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKIDVLCGIGIKKVAC 4239

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN-----------LVQD-----SHTTIT 166
            G    + LT  G V    ++   G    +    N           +++D      HT   
Sbjct: 4240 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT--L 4297

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +    
Sbjct: 4298 ALASNGDVYAWGSNSEGQLGLGHTN-HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4356

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G+   +QL  P +V
Sbjct: 4357 PPRAPGVSVPLQLGLPDTV 4375



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 134/335 (40%), Gaps = 89/335 (26%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSD-- 298
           + K  H     ++ P +   +              G+ ++K+ +G   S+   +      
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 299 -------GVLSDDFRVLNP-------ATQILDVNF 319
                  G  S +   L P       AT+I+DV+ 
Sbjct: 638 WGCGACLGCGSSEATALRPKLIEELAATRIVDVSI 672



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
           mutus]
          Length = 4874

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 516 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 571

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 572 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 618

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 619 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 674

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 675 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 730



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 131/300 (43%), Gaps = 85/300 (28%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4095 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4152

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA----- 120
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + QA     
Sbjct: 4153 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQARNNTL 4198

Query: 121  -----CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELY 175
                   G +H L +++ G +                                     ++
Sbjct: 4199 FFLQVACGLNHTLAVSADGSM-------------------------------------VW 4221

Query: 176  TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
             +G+ +YG++G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG   
Sbjct: 4222 AFGDGDYGKLGLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDR 4279

Query: 236  AVQLDSPKSV-HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
             + L   ++  H  PQ I  P +A                 G+V++ +  G +H++   +
Sbjct: 4280 LIGLPEGRARNHNRPQQI--PVLA-----------------GVVIEDVAVGAEHTLALAS 4320



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 116/258 (44%), Gaps = 22/258 (8%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q  A  +   
Sbjct: 4144 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQ--ARNNTLF 4199

Query: 63   VLTSTTGLWHSLALN-DCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
             L    GL H+LA++ D   V+ +G   +G+LGL ++  KS   P++V  L  + + +  
Sbjct: 4200 FLQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVA 4257

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITS 167
             G    + LT  G V    ++   G         + P Q     GV    V        +
Sbjct: 4258 CGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLA 4317

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
            L S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +     
Sbjct: 4318 LASTGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVP 4376

Query: 228  LYAFGIGSAVQLDSPKSV 245
              A G+   +QL  P +V
Sbjct: 4377 PRAPGVSVPLQLGLPDTV 4394



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 408 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 457

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 458 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 514

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 515 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 536

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 537 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 588

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 589 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 626



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 619 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 675

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 676 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 722

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 723 AGTSHSLAWTA 733


>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
          Length = 1203

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               SL+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L L+               EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 LSLSHDN------------EVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
          Length = 4856

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4088 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4145

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4146 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4191

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4192 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4214

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4215 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4272

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G+V++ +  G +H++ 
Sbjct: 4273 NHNRPQQI--PVLA-----------------GVVIEDVAVGAEHTLA 4300



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4041 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4089

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4090 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4147

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4148 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4169

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4170 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 4228



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4137 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4194

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4195 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4241

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
            G    + LT  G V    ++   G         + P Q     GV    V        +L
Sbjct: 4242 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4301

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
             S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +      
Sbjct: 4302 ASTGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPP 4360

Query: 229  YAFGIGSAVQLDSPKSV 245
             A G+   +QL  P +V
Sbjct: 4361 RAPGVSVPLQLGLPDTV 4377



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
           harrisii]
          Length = 4865

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 115/238 (48%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+++ GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVSEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLA 732



 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    V+Q   G+ H  V+T
Sbjct: 4097 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVIQMSCGFKHSAVVT 4154

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4155 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4200

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4201 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4223

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4224 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4281

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G+V++ +  G +H++ 
Sbjct: 4282 NHNRPQQI--PVLA-----------------GVVIEDVAVGAEHTLA 4309



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4050 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4098

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    V+Q   G+ H  V+TS 
Sbjct: 4099 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVIQMSCGFKHSAVVTSD 4156

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4157 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4178

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4179 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 4237



 Score = 77.8 bits (190), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 113/257 (43%), Gaps = 30/257 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4146 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4203

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4204 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4250

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
            G    + LT  G V    ++   G         + P Q     GV    V        +L
Sbjct: 4251 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4310

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
             S G++Y WG+N  GQ+G+ ++N  V +P  +  L    I  I+ G  HS   + S    
Sbjct: 4311 ASTGDVYAWGSNSEGQLGLGHTN-HVREPTLITVLQGKNIRQISAGRCHSAAWTASPVPP 4369

Query: 229  YAFGIGSAVQLDSPKSV 245
             A G+   +QL  P ++
Sbjct: 4370 RAPGVSVPLQLGLPDAI 4386



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   ++  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVSEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 60.8 bits (146), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  V++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGVAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1 [Nomascus leucogenys]
          Length = 4855

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDVSIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score = 90.5 bits (223), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 127/290 (43%), Gaps = 80/290 (27%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P + +      VVQ   G+ H  V+T
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPXQGE-----EVVQMSCGFKHSAVVT 4144

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4145 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4190

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4191 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4213

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+++ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4214 GLGNS-TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4271

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
             H  PQ I  P +A                 G++++ +  G +H++   +
Sbjct: 4272 NHNRPQQI--PVLA-----------------GVIIEDVAVGAEHTLALAS 4302



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 109/240 (45%), Gaps = 58/240 (24%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4045 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4093

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P + +      VVQ   G+ H  V+TS 
Sbjct: 4094 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPXQGE-----EVVQMSCGFKHSAVVTSD 4146

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4147 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4168

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ I
Sbjct: 4169 KL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKI 4227



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 114/259 (44%), Gaps = 34/259 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4136 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4193

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P+++  L  + + +   
Sbjct: 4194 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKIDVLCGIGIKKVAC 4240

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN-----------LVQD-----SHTTIT 166
            G    + LT  G V    ++   G    +    N           +++D      HT   
Sbjct: 4241 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT--L 4298

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +    
Sbjct: 4299 ALASNGDVYAWGSNSEGQLGLGHTN-HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4357

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G+   +QL  P +V
Sbjct: 4358 PPRAPGVSVPLQLGLPDTV 4376



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 134/335 (40%), Gaps = 89/335 (26%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSD-- 298
           + K  H     ++ P +   +              G+ ++K+ +G   S+   +      
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 299 -------GVLSDDFRVLNP-------ATQILDVNF 319
                  G  S +   L P       AT+I+DV+ 
Sbjct: 638 WGCGACLGCGSSEATALRPKLIEELAATRIVDVSI 672



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|301092977|ref|XP_002997338.1| HECT E3 ubiquitin ligase, putative [Phytophthora infestans T30-4]
 gi|262110827|gb|EEY68879.1| HECT E3 ubiquitin ligase, putative [Phytophthora infestans T30-4]
          Length = 741

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 93/158 (58%), Gaps = 23/158 (14%)

Query: 938  LCNYPFIFDAKAKTTLLEMD----QRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSR 993
             C++PF+ DA +K+ +L++D    QR + + A+   +  L   + +P     YL ++V R
Sbjct: 344  FCDFPFVLDAASKSKVLQIDSDLEQRSRAQDAVLSRSIVLMESSASP-----YLLLKVRR 398

Query: 994  DNIVEDTIRELAQYTTN--DFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLL 1051
            ++IVED +++L   + +    KKPLKV            KF GEE  D GGV++EF  +L
Sbjct: 399  EHIVEDAMQQLVHLSASAETLKKPLKV------------KFVGEEGIDEGGVQKEFFQIL 446

Query: 1052 LKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            ++++LDP YGMF   EETR++WF+ D+ E    + LIG
Sbjct: 447  IRQLLDPAYGMFTYDEETRTLWFNSDSLEATMEFELIG 484



 Score = 70.5 bits (171), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y EETR++WF+ D+ E      LIGTL GLAIYN  I+++ FP  +YKK+    +
Sbjct: 455 YGMFTYDEETRTLWFNSDSLEATMEFELIGTLLGLAIYNAVILDVSFPHIVYKKLRGCSL 514

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
            L+DL+   P L + L+ +L + E D+E V+   F   Y
Sbjct: 515 GLEDLELALPDLGRGLRQLLKF-EGDVEGVYQRNFEYSY 552


>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4846

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDVSIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4078 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4135

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4136 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4181

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4182 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4204

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+++ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4205 GLGNS-TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4262

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G++++ +  G +H++ 
Sbjct: 4263 NHNRPQQI--PVLA-----------------GMIIEDVAVGAEHTLA 4290



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4031 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4079

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4080 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4137

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4138 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4159

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ I
Sbjct: 4160 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKI 4218



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 114/259 (44%), Gaps = 34/259 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4127 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4184

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P+++  L  + + +   
Sbjct: 4185 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKIDVLCGIGIKKVAC 4231

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN-----------LVQD-----SHTTIT 166
            G    + LT  G V    ++   G    +    N           +++D      HT   
Sbjct: 4232 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT--L 4289

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +    
Sbjct: 4290 ALASNGDVYAWGSNSEGQLGLGHTN-HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4348

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G+   +QL  P ++
Sbjct: 4349 PPRAPGVSVPLQLGLPDTL 4367



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
          Length = 4862

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDVSIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 75/290 (25%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4151 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4196

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4197 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4219

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+++ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4220 GLGNS-TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4277

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
             H  PQ I  P +A                 G++++ +  G +H++   +
Sbjct: 4278 NHNRPQQI--PVLA-----------------GMIIEDVAVGAEHTLALAS 4308



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4046 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4094

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4095 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4152

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4153 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4174

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ I
Sbjct: 4175 KL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKI 4233



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 114/259 (44%), Gaps = 34/259 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4142 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4199

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P+++  L  + + +   
Sbjct: 4200 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKIDVLCGIGIKKVAC 4246

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN-----------LVQD-----SHTTIT 166
            G    + LT  G V    ++   G    +    N           +++D      HT   
Sbjct: 4247 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT--L 4304

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L S G++Y WG+N  GQ+G+ ++N  V +P  V  L    I  I+ G  HS   +    
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTN-HVREPTLVTGLQGKNIRQISAGRCHSAAWTAPPV 4363

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G+   +QL  P ++
Sbjct: 4364 PPRAPGVSVPLQLGLPDTL 4382



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 134/335 (40%), Gaps = 89/335 (26%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSD-- 298
           + K  H     ++ P +   +              G+ ++K+ +G   S+   +      
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 299 -------GVLSDDFRVLNP-------ATQILDVNF 319
                  G  S +   L P       AT+I+DV+ 
Sbjct: 638 WGCGACLGCGSSEATALRPKLIEELAATRIVDVSI 672



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
           [Pan troglodytes]
 gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4861

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDVSIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4151 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4196

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L ++  G +                                     ++ +G+ +YG++
Sbjct: 4197 HTLAVSVDGSM-------------------------------------VWAFGDGDYGKL 4219

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+++ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4220 GLGNS-TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4277

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G++++ +  G +H++ 
Sbjct: 4278 NHNRPQQI--PVLA-----------------GVIIEDVAVGAEHTLA 4305



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4046 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4094

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4095 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4152

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4153 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4174

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ I
Sbjct: 4175 -KLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKI 4233



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 113/259 (43%), Gaps = 34/259 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4142 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4199

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             ++            D   V+ +G   +G+LGL ++  KS   P+++  L  + + +   
Sbjct: 4200 AVSV-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKIDVLCGIGIKKVAC 4246

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN-----------LVQD-----SHTTIT 166
            G    + LT  G V    ++   G    +    N           +++D      HT   
Sbjct: 4247 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT--L 4304

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +    
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTN-HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4363

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G+   +QL  P +V
Sbjct: 4364 PPRAPGVSVPLQLGLPDTV 4382



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
          Length = 4862

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDVSIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4151 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4196

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4197 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4219

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+++ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4220 GLGNS-TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4277

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G++++ +  G +H++ 
Sbjct: 4278 NHNRPQQI--PVLA-----------------GMIIEDVAVGAEHTLA 4305



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4046 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4094

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4095 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4152

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4153 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4174

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ I
Sbjct: 4175 KL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKI 4233



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 114/259 (44%), Gaps = 34/259 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4142 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4199

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P+++  L  + + +   
Sbjct: 4200 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKIDVLCGIGIKKVAC 4246

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN-----------LVQD-----SHTTIT 166
            G    + LT  G V    ++   G    +    N           +++D      HT   
Sbjct: 4247 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT--L 4304

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L S G++Y WG+N  GQ+G+ ++N  V +P  V  L    I  I+ G  HS   +    
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTN-HVREPTLVTGLQGKNIRQISAGRCHSAAWTAPPV 4363

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G+   +QL  P ++
Sbjct: 4364 PPRAPGVSVPLQLGLPDTL 4382



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4853

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDVSIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4085 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4142

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4143 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4188

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4189 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4211

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+++ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4212 GLGNS-TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4269

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G++++ +  G +H++ 
Sbjct: 4270 NHNRPQQI--PVLA-----------------GMIIEDVAVGAEHTLA 4297



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4038 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4086

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4087 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4144

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4145 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4166

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ I
Sbjct: 4167 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKI 4225



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 114/259 (44%), Gaps = 34/259 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4134 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4191

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P+++  L  + + +   
Sbjct: 4192 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKIDVLCGIGIKKVAC 4238

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN-----------LVQD-----SHTTIT 166
            G    + LT  G V    ++   G    +    N           +++D      HT   
Sbjct: 4239 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT--L 4296

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +    
Sbjct: 4297 ALASNGDVYAWGSNSEGQLGLGHTN-HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4355

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G+   +QL  P ++
Sbjct: 4356 PPRAPGVSVPLQLGLPDTL 4374



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4861

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDVSIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4151 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4196

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4197 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4219

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+++ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4220 GLGNS-TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4277

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G++++ +  G +H++ 
Sbjct: 4278 NHNRPQQI--PVLA-----------------GMIIEDVAVGAEHTLA 4305



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4046 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4094

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4095 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4152

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4153 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4174

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ I
Sbjct: 4175 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKI 4233



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 114/259 (44%), Gaps = 34/259 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4142 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4199

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P+++  L  + + +   
Sbjct: 4200 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKIDVLCGIGIKKVAC 4246

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN-----------LVQD-----SHTTIT 166
            G    + LT  G V    ++   G    +    N           +++D      HT   
Sbjct: 4247 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT--L 4304

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +    
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTN-HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4363

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G+   +QL  P ++
Sbjct: 4364 PPRAPGVSVPLQLGLPDTL 4382



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
           garnettii]
          Length = 4828

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4060 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4117

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4118 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4163

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4164 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4186

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4187 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4244

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G+V++ +  G +H++ 
Sbjct: 4245 NHNRPQQI--PVLA-----------------GVVIEDVAVGAEHTLA 4272



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4013 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4061

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4062 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4119

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4120 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4141

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4142 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 4200



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4109 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4166

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4167 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4213

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
            G    + LT  G V    ++   G         + P Q     GV    V        +L
Sbjct: 4214 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4273

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
             S G++Y WG+N  GQ+G+ ++N  V +P  V  L    I  I+ G  HS   +      
Sbjct: 4274 ASNGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPP 4332

Query: 229  YAFGIGSAVQLDSPKSV 245
             A G+   +QL  P +V
Sbjct: 4333 RAPGVSVPLQLGLPDAV 4349



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|307109548|gb|EFN57786.1| hypothetical protein CHLNCDRAFT_21324 [Chlorella variabilis]
          Length = 454

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 102/201 (50%), Gaps = 14/201 (6%)

Query: 891  IRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDF--LCNYPFIFDAK 948
            +R  +  GG  + YT F+   L+   +++ +Y  W   R N ST     +C  P++   +
Sbjct: 9    LRQASEDGGGIIPYTEFHNAQLSEHANLQAEYVAW---RQNTSTTALCSICQMPYLLTPE 65

Query: 949  AKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYT 1008
            AK+ ++  +  +Q +  ++      F  +     +  +L++ V R ++VED + +LA   
Sbjct: 66   AKSFIMHGEAAMQQQQHLSAAAMQAFF-SGGSAAVAAFLQIRVRRSHVVEDALNQLAHLE 124

Query: 1009 TNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEE 1068
              D KKPL+V      ++   V    E A+D GGV +EF  LL +++  P+Y MF   E 
Sbjct: 125  AQDLKKPLRVT-----FITGGVP---EPAQDEGGVTKEFFQLLTRDLFRPEYAMFTYNEL 176

Query: 1069 TRSIWFSEDTFEDQNMYFLIG 1089
            TR+ WFS  + E ++ Y L+G
Sbjct: 177  TRTHWFSPASLEAEDEYALVG 197



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 59/99 (59%), Gaps = 2/99 (2%)

Query: 720 YGITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           Y +  Y E TR+ WFS  + E ++   L+G + GLAIYN  I+++ FPLA+YKK+L    
Sbjct: 168 YAMFTYNELTRTHWFSPASLEAEDEYALVGAVLGLAIYNAVILDVHFPLAVYKKLLGIRP 227

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
              DLK   P L + LQ +LD+ E D+E VF  +F   Y
Sbjct: 228 TFADLKAAFPDLGRGLQQLLDF-EGDVEAVFCRSFTAQY 265


>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
           boliviensis boliviensis]
          Length = 4860

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDVSIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4149

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4150 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4195

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G V                                     ++ +G+ +YG++
Sbjct: 4196 HTLAVSADGSV-------------------------------------VWAFGDGDYGKL 4218

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4219 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4276

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G++++ +  G +H++ 
Sbjct: 4277 NHNRPQQI--PVLA-----------------GVIIEDVAVGAEHTLA 4304



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4045 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4093

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4094 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4151

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4152 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4173

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4174 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKV 4232



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 114/259 (44%), Gaps = 34/259 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4141 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4198

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4199 AVSA-----------DGSVVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4245

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN-----------LVQD-----SHTTIT 166
            G    + LT  G V    ++   G    +    N           +++D      HT   
Sbjct: 4246 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT--L 4303

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +    
Sbjct: 4304 ALASNGDVYAWGSNSEGQLGLGHTN-HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4362

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G+   +QL  P +V
Sbjct: 4363 PPRAPGVSVPLQLGLPDTV 4381



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
 gi|194702086|gb|ACF85127.1| unknown [Zea mays]
 gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 1 [Zea mays]
 gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 2 [Zea mays]
          Length = 389

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 137/304 (45%), Gaps = 54/304 (17%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +SLA+ D G +FTWG +  G LG    + K++S P  V  LA   +VQA           
Sbjct: 52  NSLAICDDGRLFTWGWNQRGTLG-HPPETKTESSPGPVDALAGFKIVQAA---------- 100

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS--------IPKRVKGLASVSV 117
              G WH LA++D G  + WGG+ +GQ G E   K+  +        IP+R      + V
Sbjct: 101 --IGGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCA--LKLKV 156

Query: 118 VQACAGYSHCLVLTSSGVVTCTHKENGCG-----SDP--SQGVQS-NLVQDSHTTITSLN 169
            Q  AG +H +VLT  G V    +    G     S P   QG++   ++        +L 
Sbjct: 157 RQVAAGGTHSVVLTQEGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALT 216

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
               L+ WGNNEYGQ+G  ++    ++P RVE L +L +  IA G  HS  L+     +Y
Sbjct: 217 EDVILWAWGNNEYGQLGTGDTQPR-SQPIRVEGLSDLSLVDIAAGGWHSTALTID-GEVY 274

Query: 230 AFGIGSAVQL--DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGD 287
           A+G G   +L     KS H  P           V + AGED          + ++  GG 
Sbjct: 275 AWGRGEHGRLGFGDDKSSHMVPL---------KVELLAGED----------IVQVSCGGT 315

Query: 288 HSIV 291
           HS+ 
Sbjct: 316 HSVA 319



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 117/285 (41%), Gaps = 85/285 (29%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS--------IPKRVKGLASVSVVQA 54
           G WH LA++D G  + WGG+ +GQ G E   K+  +        IP+R      + V Q 
Sbjct: 102 GGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCA--LKLKVRQV 159

Query: 55  CAGYSHCLVLTSTTGLW----------------------------------HSLALNDCG 80
            AG +H +VLT    +W                                  H+LAL +  
Sbjct: 160 AAGGTHSVVLTQEGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTEDV 219

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
            ++ WG + +GQLG  + D + +S P RV+GL+ +S+V   AG  H   LT  G      
Sbjct: 220 ILWAWGNNEYGQLG--TGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTIDG------ 271

Query: 141 KENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRV 200
                                           E+Y WG  E+G++G  +  ++   P +V
Sbjct: 272 --------------------------------EVYAWGRGEHGRLGFGDDKSSHMVPLKV 299

Query: 201 ESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
           E L    I  ++CG  HS  L++   R++++G G   +L   + V
Sbjct: 300 ELLAGEDIVQVSCGGTHSVALARD-GRMFSYGRGDHGRLGYGRKV 343


>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan
           paniscus]
          Length = 4798

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDVSIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4030 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4087

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4088 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4133

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L ++  G +                                     ++ +G+ +YG++
Sbjct: 4134 HTLAVSVDGSM-------------------------------------VWAFGDGDYGKL 4156

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+++ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4157 GLGNS-TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4214

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G++++ +  G +H++ 
Sbjct: 4215 NHNRPQQI--PVLA-----------------GVIIEDVAVGAEHTLA 4242



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 3983 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4031

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4032 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4089

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4090 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4111

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ I
Sbjct: 4112 -KLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKI 4170



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 113/259 (43%), Gaps = 34/259 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4079 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4136

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             ++            D   V+ +G   +G+LGL ++  KS   P+++  L  + + +   
Sbjct: 4137 AVSV-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKIDVLCGIGIKKVAC 4183

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN-----------LVQD-----SHTTIT 166
            G    + LT  G V    ++   G    +    N           +++D      HT   
Sbjct: 4184 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT--L 4241

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +    
Sbjct: 4242 ALASNGDVYAWGSNSEGQLGLGHTN-HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4300

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G+   +QL  P +V
Sbjct: 4301 PPRAPGVSVPLQLGLPDTV 4319



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
           africana]
          Length = 4858

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4090 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4147

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4148 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4193

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L ++S G +                                     ++ +G+ +YG++
Sbjct: 4194 HTLAVSSDGSM-------------------------------------VWAFGDGDYGKL 4216

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4217 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4274

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G+V++ +  G +H++ 
Sbjct: 4275 NHNRPQQI--PVLA-----------------GVVIEDVAVGAEHTLA 4302



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4043 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4091

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4092 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4149

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4150 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4171

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4172 -KLPERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 4230



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4139 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4196

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             ++S           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4197 AVSS-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4243

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
            G    + LT  G V    ++   G         + P Q     GV    V        +L
Sbjct: 4244 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4303

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
             S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +      
Sbjct: 4304 ASTGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPP 4362

Query: 229  YAFGIGSAVQLDSPKSV 245
             A G+   +QL  P +V
Sbjct: 4363 RAPGVSVPLQLGLPDAV 4379



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIRK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
           domestica]
          Length = 4790

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLA 732



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    V+Q   G+ H  V+T
Sbjct: 4022 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVIQMSCGFKHSAVVT 4079

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4080 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4125

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4126 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4148

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4149 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4206

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G+V++ I  G +H++ 
Sbjct: 4207 NHNRPQQI--PVLA-----------------GVVIEDIAVGAEHTLA 4234



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 3975 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4023

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    V+Q   G+ H  V+TS 
Sbjct: 4024 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVIQMSCGFKHSAVVTSD 4081

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4082 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4103

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4104 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 4162



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 34/259 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4071 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4128

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4129 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4175

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQD----------------SHTTIT 166
            G    + LT  G V    ++   G    +    N  Q                  HT   
Sbjct: 4176 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDIAVGAEHT--L 4233

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L S G++Y WG+N  GQ+G+ ++N  V +P  +  L    I  I+ G  HS   + S  
Sbjct: 4234 ALASTGDVYAWGSNSEGQLGLGHTN-HVREPTLITILQGKNIRQISAGRCHSAAWTASPV 4292

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G+   +QL  P +V
Sbjct: 4293 PPRAPGVSVPLQLGLPDTV 4311



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  V++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGVAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
 gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           1; AltName: Full=p532; AltName: Full=p619
 gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
           sapiens]
 gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
           sapiens]
          Length = 4861

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDVSIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 75/290 (25%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4151 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4196

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4197 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4219

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+++ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4220 GLGNS-TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4277

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
             H  PQ I  P +A                 G++++ +  G +H++   +
Sbjct: 4278 NHNRPQQI--PVLA-----------------GVIIEDVAVGAEHTLALAS 4308



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4046 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4094

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4095 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4152

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4153 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4174

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ I
Sbjct: 4175 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKI 4233



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 114/259 (44%), Gaps = 34/259 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4142 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4199

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P+++  L  + + +   
Sbjct: 4200 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKIDVLCGIGIKKVAC 4246

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN-----------LVQD-----SHTTIT 166
            G    + LT  G V    ++   G    +    N           +++D      HT   
Sbjct: 4247 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT--L 4304

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +    
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTN-HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4363

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G+   +QL  P +V
Sbjct: 4364 PPRAPGVSVPLQLGLPDTV 4382



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 134/335 (40%), Gaps = 89/335 (26%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSD-- 298
           + K  H     ++ P +   +              G+ ++K+ +G   S+   +      
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 299 -------GVLSDDFRVLNP-------ATQILDVNF 319
                  G  S +   L P       AT+I+DV+ 
Sbjct: 638 WGCGACLGCGSSEATALRPKLIEELAATRIVDVSI 672



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
          Length = 4409

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 516 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 571

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 572 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 618

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 619 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 674

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 675 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 730



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 134/283 (47%), Gaps = 39/283 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 3584 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 3632

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 3633 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 3690

Query: 134  GVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINN 189
            G +       +   G G+  ++ +   +    + T+        ++ +G+ +YG++G+ N
Sbjct: 3691 GKLFTFGNGDYGRLGLGNTSNKKLPERVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 3750

Query: 190  SNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV-HKT 248
            S T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++  H  
Sbjct: 3751 S-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRARNHNR 3808

Query: 249  PQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
            PQ +  P +A                 G+V++ +  G +H++ 
Sbjct: 3809 PQQV--PVLA-----------------GVVIEDVAVGAEHTLA 3832



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 408 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 457

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 458 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 514

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 515 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 536

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 537 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 588

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 589 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 626



 Score = 67.8 bits (164), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 112/258 (43%), Gaps = 43/258 (16%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV          AC       
Sbjct: 3680 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERV----------AC------- 3720

Query: 63   VLTSTTGLWHSLALN-DCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  GL H+LA++ D   V+ +G   +G+LGL ++  KS   P++V  L  + + +  
Sbjct: 3721 ------GLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVA 3772

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITS 167
             G    + LT  G V    ++   G         + P Q     GV    V        +
Sbjct: 3773 CGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLA 3832

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
            L S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +     
Sbjct: 3833 LASTGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVP 3891

Query: 228  LYAFGIGSAVQLDSPKSV 245
              A G+   +QL  P +V
Sbjct: 3892 PRAPGVSVPLQLGLPDAV 3909



 Score = 60.1 bits (144), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 619 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 675

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 676 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 722

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 723 AGTSHSLAWTA 733


>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1 isoform 1 [Canis lupus familiaris]
          Length = 4861

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/236 (31%), Positives = 112/236 (47%), Gaps = 38/236 (16%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK V+ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVVEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQDSHTT----------- 164
           AG    L LTS+G V       C     GCGS  +  ++  L+++   T           
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSX 676

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
             +L    E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 CLALRHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 75/290 (25%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4151 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4196

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4197 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4219

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4220 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4277

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
             H  PQ I  P +A                 G+V++ +  G +H++   +
Sbjct: 4278 NHNRPQQI--PVLA-----------------GVVIEDVAVGAEHTLALAS 4308



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4046 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4094

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4095 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4152

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4153 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4174

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4175 KL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 4233



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4142 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4199

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4200 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4246

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
            G    + LT  G V    ++   G         + P Q     GV    V        +L
Sbjct: 4247 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4306

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
             S G++Y WG+N  GQ+G+ ++N  V +P  V  L    I  I+ G  HS   +      
Sbjct: 4307 ASTGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPP 4365

Query: 229  YAFGIGSAVQLDSPKSV 245
             A G+   +QL  P +V
Sbjct: 4366 RAPGVSVPLQLGLPDAV 4382



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVVEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G S C
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSXC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL    EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALRHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
          Length = 4861

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDVSIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  100 bits (248), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 75/290 (25%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4151 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4196

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4197 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4219

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+++ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4220 GLGNS-TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4277

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
             H  PQ I  P +A                 G++++ +  G +H++   +
Sbjct: 4278 NHNRPQQI--PVLA-----------------GVIIEDVAVGAEHTLALAS 4308



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4046 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4094

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4095 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4152

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4153 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4174

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ I
Sbjct: 4175 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKI 4233



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 114/259 (44%), Gaps = 34/259 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4142 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4199

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P+++  L  + + +   
Sbjct: 4200 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKIDVLCGIGIKKVAC 4246

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN-----------LVQD-----SHTTIT 166
            G    + LT  G V    ++   G    +    N           +++D      HT   
Sbjct: 4247 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT--L 4304

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +    
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTN-HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4363

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G+   +QL  P +V
Sbjct: 4364 PPRAPGVSVPLQLGLPDTV 4382



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1 [Pongo abelii]
          Length = 4864

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDVSIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 75/290 (25%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4096 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4153

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4154 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4199

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4200 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4222

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+++ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4223 GLGNS-TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4280

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
             H  PQ I  P +A                 G++++ +  G +H++   +
Sbjct: 4281 NHNRPQQI--PLLA-----------------GVIIEDVAVGAEHTLALAS 4311



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4049 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4097

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4098 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4155

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4156 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4177

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ I
Sbjct: 4178 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKI 4236



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 114/259 (44%), Gaps = 34/259 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4145 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4202

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P+++  L  + + +   
Sbjct: 4203 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKIDVLCGIGIKKVAC 4249

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN-----------LVQD-----SHTTIT 166
            G    + LT  G V    ++   G    +    N           +++D      HT   
Sbjct: 4250 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPLLAGVIIEDVAVGAEHT--L 4307

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +    
Sbjct: 4308 ALASNGDVYAWGSNSEGQLGLGHTN-HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4366

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G+   +QL  P +V
Sbjct: 4367 PPRAPGVSVPLQLGLPDTV 4385



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 134/335 (40%), Gaps = 89/335 (26%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSD-- 298
           + K  H     ++ P +   +              G+ ++K+ +G   S+   +      
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLALTSTGQVYA 637

Query: 299 -------GVLSDDFRVLNP-------ATQILDVNF 319
                  G  S +   L P       AT+I+DV+ 
Sbjct: 638 WGCGACLGCGSSEATALRPKLIEELAATRIVDVSI 672



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus
           cuniculus]
          Length = 4860

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4149

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4150 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4195

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4196 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4218

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4219 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4276

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ +  P +A                 G+V++ +  G +H++ 
Sbjct: 4277 NHNRPQQV--PVLA-----------------GVVIEDVAVGAEHTLA 4304



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4045 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4093

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4094 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4151

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4152 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4173

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4174 KL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 4232



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4141 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4198

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4199 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4245

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
            G    + LT  G V    ++   G         + P Q     GV    V        +L
Sbjct: 4246 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAL 4305

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
             S G++Y WG+N  GQ+G+ ++N  V +P  V  L    I  I+ G  HS   +      
Sbjct: 4306 ASTGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPP 4364

Query: 229  YAFGIGSAVQLDSPKSV 245
             A G+   +QL  P +V
Sbjct: 4365 RAPGVSVPLQLGLPDAV 4381



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 60.1 bits (144), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus
           gallus]
          Length = 4860

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLA 732



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 56/248 (22%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4092 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4149

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            +             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4150 AD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4195

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H + +++ G +                                     ++ +G+ +YG++
Sbjct: 4196 HTVAVSTDGSM-------------------------------------VWAFGDGDYGKL 4218

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4219 GLGNS-TAKSSPQKVDILCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4276

Query: 246  -HKTPQLI 252
             H  PQ +
Sbjct: 4277 NHNRPQQV 4284



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4045 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4093

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T+ 
Sbjct: 4094 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTAD 4151

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4152 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4173

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4174 -KLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 4232



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 34/259 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H +
Sbjct: 4141 GFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTV 4198

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4199 AVST-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDILCGIGIKKVAC 4245

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQD----------------SHTTIT 166
            G    + LT  G V    ++   G    +    N  Q                  HT   
Sbjct: 4246 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHT--L 4303

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L+S G++Y WG+N  GQ+G+ ++N  V +P  +  L    I  I+ G  HS   +    
Sbjct: 4304 ALSSTGDVYAWGSNSEGQLGLGHTN-HVREPTLITVLQGKNIRQISAGRCHSAAWTAPPV 4362

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G+   +QL  P ++
Sbjct: 4363 PPRAPGVSVPLQLGLPDAI 4381



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  VS+ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGVSIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
          Length = 4859

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 75/290 (25%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4148

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4149 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4194

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4195 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4217

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4218 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4275

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
             H  PQ I  P +A                 G+V++ +  G +H++   +
Sbjct: 4276 NHNRPQQI--PVLA-----------------GVVIEDVAVGAEHTLALAS 4306



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4044 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4092

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4093 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4150

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4151 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4172

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4173 KL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 4231



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4140 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4197

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4198 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4244

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
            G    + LT  G V    ++   G         + P Q     GV    V        +L
Sbjct: 4245 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4304

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
             S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +      
Sbjct: 4305 ASTGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPP 4363

Query: 229  YAFGIGSAVQLDSPKSV 245
             A G+   +QL  P +V
Sbjct: 4364 RAPGVSVPLQLGLPDAV 4380



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 60.1 bits (144), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
           gorilla gorilla]
          Length = 4502

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDVSIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  100 bits (248), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 3734 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 3791

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 3792 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 3837

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 3838 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 3860

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+++ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 3861 GLGNS-TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 3918

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G++++ +  G +H++ 
Sbjct: 3919 NHNRPQQI--PVLA-----------------GVIIEDVAVGAEHTLA 3946



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 3687 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 3735

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 3736 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 3793

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 3794 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 3815

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ I
Sbjct: 3816 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKI 3874



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 114/259 (44%), Gaps = 34/259 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 3783 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 3840

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P+++  L  + + +   
Sbjct: 3841 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKIDVLCGIGIKKVAC 3887

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN-----------LVQD-----SHTTIT 166
            G    + LT  G V    ++   G    +    N           +++D      HT   
Sbjct: 3888 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT--L 3945

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +    
Sbjct: 3946 ALASNGDVYAWGSNSEGQLGLGHTN-HVREPTVVTGLQGKNVRQISAGRCHSAAWTAPPV 4004

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G+   +QL  P +V
Sbjct: 4005 PPRAPGVSVPLQLGLPDTV 4023



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|12844231|dbj|BAB26286.1| unnamed protein product [Mus musculus]
 gi|148700107|gb|EDL32054.1| hect domain and RLD 4, isoform CRA_d [Mus musculus]
          Length = 233

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 55/222 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 42  GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVACGEAH-- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL+ +++  + +P+ +K L+ + +VQ   
Sbjct: 96  ----------TLALNDKGQVYAWGLDSDGQLGLQGSEECIR-VPRNIKSLSDIQIVQVAC 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +                                       E++ WG N+Y
Sbjct: 145 GYYHSLALSKAS--------------------------------------EVFCWGQNKY 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
           GQ+G+       T PQ ++SL+ +P   +A G  HSFVL+ S
Sbjct: 167 GQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS 208



 Score = 99.0 bits (245), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 93/186 (50%), Gaps = 52/186 (27%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LALND G+V+ WG D+ GQLGL+ +++  + +P+ +K L+ + +VQ   GY       
Sbjct: 95  HTLALNDKGQVYAWGLDSDGQLGLQGSEECIR-VPRNIKSLSDIQIVQVACGY------- 146

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                +HSLAL+   EVF WG + +GQLGL   D + Q+ P+ +K L  +  +Q  AG +
Sbjct: 147 -----YHSLALSKASEVFCWGQNKYGQLGL-GIDCQKQTSPQLIKSLLGIPFMQVAAGGA 200

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           H  VLT SG +                                      + WG N++GQ+
Sbjct: 201 HSFVLTLSGAI--------------------------------------FGWGRNKFGQL 222

Query: 186 GINNSN 191
           G+N+ N
Sbjct: 223 GLNDEN 228



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 13/99 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+   EVF WG + +GQLGL   D + Q+ P+ +K L  +  +Q  AG +H  
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGL-GIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSF 203

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKK 101
           VLT +            G +F WG +  GQLGL   + +
Sbjct: 204 VLTLS------------GAIFGWGRNKFGQLGLNDENGR 230


>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Meleagris gallopavo]
          Length = 4334

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLA 732



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 56/248 (22%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 3566 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 3623

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            +             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 3624 AD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 3669

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H + ++  G +                                     ++ +G+ +YG++
Sbjct: 3670 HTVAVSMDGSM-------------------------------------VWAFGDGDYGKL 3692

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 3693 GLGNS-TAKSSPQKVDILCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 3750

Query: 246  -HKTPQLI 252
             H  PQ +
Sbjct: 3751 NHNRPQQV 3758



 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 3519 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 3567

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T+ 
Sbjct: 3568 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTAD 3625

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 3626 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 3647

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 3648 -KLPERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 3706



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 73.2 bits (178), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 111/259 (42%), Gaps = 34/259 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H +
Sbjct: 3615 GFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTV 3672

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             ++            D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 3673 AVSM-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDILCGIGIKKVAC 3719

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQD----------------SHTTIT 166
            G    + LT  G V    ++   G    +    N  Q                  HT   
Sbjct: 3720 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHT--L 3777

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L+S G++Y WG+N  GQ+G+ ++N  V +P  +  L    I  I+ G  HS   +    
Sbjct: 3778 ALSSTGDVYAWGSNSEGQLGLGHTN-HVREPTLITVLQGKNIRQISAGRCHSAAWTAPPV 3836

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G+   +QL  P ++
Sbjct: 3837 PPRAPGVSVPLQLGLPDAI 3855



 Score = 61.6 bits (148), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  VS+ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGVSIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4853

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4085 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4142

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4143 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4188

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G V                                     ++ +G+ +YG++
Sbjct: 4189 HTLAVSADGSV-------------------------------------VWAFGDGDYGKL 4211

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4212 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4269

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G+V++ +  G +H++ 
Sbjct: 4270 NHNRPQQI--PVLA-----------------GVVIEDVAVGAEHTLA 4297



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4038 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4086

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4087 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4144

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4145 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4166

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4167 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKV 4225



 Score = 93.6 bits (231), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLSLTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 131/302 (43%), Gaps = 54/302 (17%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYSHCLVL 64
           H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV   AGY      
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCVSAGYR----- 521

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
                  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G 
Sbjct: 522 -------HSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GS 570

Query: 125 SHCLVLTSSGVVTCT----------HKENGCGSDPS-----QGVQSNLVQDSHTTITSLN 169
           SH + L+  G    +          H +      P      QG+    V     +  SL 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLT 630

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           S G++Y WG      +G  +S  T  +P+ +E L    I  I+ G +H   LS   + +Y
Sbjct: 631 STGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD-NEVY 687

Query: 230 AFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHS 289
           A+G  S  Q     S         GP I  P          VS   G+ +++I +G  HS
Sbjct: 688 AWGNNSMGQCGQGNST--------GP-ITKP--------KKVSGLDGIAIQQISAGTSHS 730

Query: 290 IV 291
           + 
Sbjct: 731 LA 732



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4134 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4191

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4192 AVSA-----------DGSVVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4238

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
            G    + LT  G V    ++   G         + P Q     GV    V        +L
Sbjct: 4239 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4298

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
             S G++Y WG+N  GQ+G+ ++N  V +P  V  L    I  I+ G  HS   +      
Sbjct: 4299 ASTGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPP 4357

Query: 229  YAFGIGSAVQLDSPKSV 245
             A G+   +QL  P +V
Sbjct: 4358 RAPGVSVPLQLGLPDAV 4374



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 103/239 (43%), Gaps = 55/239 (23%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G   +L
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKL 594



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 16/119 (13%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
           G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHCL           
Sbjct: 633 GQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCL----------- 678

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 132
            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  AG SH L  T+
Sbjct: 679 -ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 43.9 bits (102), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  AG SH L  T
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734

Query: 66  S 66
           +
Sbjct: 735 A 735


>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4846

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4078 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4135

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4136 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4181

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G V                                     ++ +G+ +YG++
Sbjct: 4182 HTLAVSADGSV-------------------------------------VWAFGDGDYGKL 4204

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4205 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4262

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G+V++ +  G +H++ 
Sbjct: 4263 NHNRPQQI--PVLA-----------------GVVIEDVAVGAEHTLA 4290



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4031 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4079

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 4080 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4137

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4138 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4159

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4160 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKV 4218



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLSLTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 130/302 (43%), Gaps = 54/302 (17%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYSHCLVL 64
           H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV   AGY      
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCVSAGYR----- 521

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
                  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G 
Sbjct: 522 -------HSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GS 570

Query: 125 SHCLVLTSSGVVTCTHKENGCGS---------------DPSQGVQSNLVQDSHTTITSLN 169
           SH + L+  G    +      G                +  QG+    V     +  SL 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLT 630

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           S G++Y WG      +G  +S  T  +P+ +E L    I  I+ G +H   LS   + +Y
Sbjct: 631 STGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD-NEVY 687

Query: 230 AFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHS 289
           A+G  S  Q     S         GP I  P          VS   G+ +++I +G  HS
Sbjct: 688 AWGNNSMGQCGQGNST--------GP-ITKP--------KKVSGLDGIAIQQISAGTSHS 730

Query: 290 IV 291
           + 
Sbjct: 731 LA 732



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 4127 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4184

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4185 AVSA-----------DGSVVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4231

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
            G    + LT  G V    ++   G         + P Q     GV    V        +L
Sbjct: 4232 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4291

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
             S G++Y WG+N  GQ+G+ ++N  V +P  V  L    I  I+ G  HS   +      
Sbjct: 4292 ASTGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPP 4350

Query: 229  YAFGIGSAVQLDSPKSV 245
             A G+   +QL  P +V
Sbjct: 4351 RAPGVSVPLQLGLPDAV 4367



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 103/239 (43%), Gaps = 55/239 (23%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G   +L
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKL 594



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 16/119 (13%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
           G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHCL           
Sbjct: 633 GQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCL----------- 678

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 132
            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  AG SH L  T+
Sbjct: 679 -ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 43.9 bits (102), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  AG SH L  T
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734

Query: 66  S 66
           +
Sbjct: 735 A 735


>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1132

 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 115/234 (49%), Gaps = 30/234 (12%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
           G VF  G  T+G+LG  ++D +   +P           +    GY    + TS  G  H+
Sbjct: 338 GSVFACGEGTYGRLGQGTSDDEHSLVP-----------ITELQGYCIIQLATSLGGDGHT 386

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
           LA+ D GEVF+WG   +G+LG  ++++  Q  PK++  L +  VVQA  G+ H  VLT  
Sbjct: 387 LAVADSGEVFSWGDGDYGKLGHGNSER--QRKPKQIIALQAEHVVQASCGFKHSAVLTKD 444

Query: 134 G-VVTCTHKENGC----GSDPSQGVQ----------SNLVQDSHTTITSLNSPGELYTWG 178
           G V T    + G     G+ P +  Q          S +      T+   N+  +LY WG
Sbjct: 445 GKVFTFGQGQYGILGDGGNSPQKTPQLILSLKNEHISQIACGKDHTLALANNGKKLYAWG 504

Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           + E+G++G+  S +  + P  V+S  N+ +  IACG+  S VL+ +   LY FG
Sbjct: 505 DGEFGKLGL-GSTSVRSIPNLVDSYRNVCLKKIACGSKFSIVLATN-GYLYTFG 556



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 105/257 (40%), Gaps = 34/257 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS  L   G+VFT+G   +G LG        Q  P+ +  L +  + Q   G  H L
Sbjct: 434 GFKHSAVLTKDGKVFTFGQGQYGILG--DGGNSPQKTPQLILSLKNEHISQIACGKDHTL 491

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            L            N+  +++ WG    G+LGL S   +  SIP  V    +V + +   
Sbjct: 492 ALA-----------NNGKKLYAWGDGEFGKLGLGSTSVR--SIPNLVDSYRNVCLKKIAC 538

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTT--------------ITSL 168
           G    +VL ++G +     ++  G   +  + + + Q   +               I +L
Sbjct: 539 GSKFSIVLATNGYLYTFGHKDFLGIAETDLLDNTIPQIVSSLMPHPIIDIAVGCNYILAL 598

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
           ++ G ++ WG NE GQ+GI  +N     PQ V +     I  ++ G  H    S S S  
Sbjct: 599 DNSGNIWGWGTNEEGQLGIGTTNPHYL-PQLVCTFSGTNITRLSAGTTHCAAWSNSQSP- 656

Query: 229 YAFGIGSAVQLDSPKSV 245
                 + +Q+ +P ++
Sbjct: 657 ---SSNTQLQIGTPNAI 670


>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
          Length = 545

 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 109/227 (48%), Gaps = 57/227 (25%)

Query: 5   WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHCLV 63
           +H+ AL++ GEVFT+G    G+LG  S  +++Q + + V+ LA   V Q AC G+     
Sbjct: 201 FHTAALSEFGEVFTFGEGKFGRLGHNS--ERNQPVARFVEALAGKRVKQVACGGF----- 253

Query: 64  LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG 123
                   H+ A+ + GEV+TWGG  HGQLG    DK ++++P RV+ L    VVQ   G
Sbjct: 254 --------HTAAVTETGEVYTWGGGEHGQLG--HGDKVNKTVPTRVESLVEKLVVQITCG 303

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
           +SH + LT +                                      GE+YTWGN ++G
Sbjct: 304 WSHTVALTDT--------------------------------------GEVYTWGNGDHG 325

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
           ++G +N  T VT P+ V+ L    +  +A    H+  L   V+ L A
Sbjct: 326 KLG-HNDTTKVTLPKLVDVLEGKRVISVASYNEHTVALVDPVAMLRA 371



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 128/263 (48%), Gaps = 37/263 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++ L D GEV+TWG    G+LG    D   + +P+ V+ L   ++ Q         
Sbjct: 42  GSGHTVVLTDEGEVYTWGRGDDGRLG--HGDNGWKFVPRLVEELRGKNIRQV-------- 91

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
               T G +H+ A+   G+++TWGG  +G+LG    ++   S P  V+ L  + V Q   
Sbjct: 92  ----TCGSYHTAAVTVSGDLYTWGGGMYGKLG--HGNETGHSTPFLVETLKGMQVRQVAC 145

Query: 123 GYSHCLV-LTSSGVVTCTHKENGC-GSDPSQGVQ-----------SNLVQDS----HTTI 165
           G  H +V L +  V T   KENG  G   ++G Q            N+VQ S    HT  
Sbjct: 146 GSRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPVEELRGKNIVQISACGFHT-- 203

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L+  GE++T+G  ++G++G +NS       + VE+L    +  +ACG  H+  ++++ 
Sbjct: 204 AALSEFGEVFTFGEGKFGRLG-HNSERNQPVARFVEALAGKRVKQVACGGFHTAAVTET- 261

Query: 226 SRLYAFGIGSAVQLDSPKSVHKT 248
             +Y +G G   QL     V+KT
Sbjct: 262 GEVYTWGGGEHGQLGHGDKVNKT 284



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 68/128 (53%), Gaps = 16/128 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+ A+ + GEV+TWGG  HGQLG    DK ++++P RV+ L    VVQ   G+SH  
Sbjct: 251 GGFHTAAVTETGEVYTWGGGEHGQLG--HGDKVNKTVPTRVESLVEKLVVQITCGWSH-- 306

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     ++AL D GEV+TWG   HG+LG    D    ++PK V  L    V+   +
Sbjct: 307 ----------TVALTDTGEVYTWGNGDHGKLG--HNDTTKVTLPKLVDVLEGKRVISVAS 354

Query: 123 GYSHCLVL 130
              H + L
Sbjct: 355 YNEHTVAL 362



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 71/156 (45%), Gaps = 21/156 (13%)

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV----- 136
           V++WG    GQLGL   D   Q  P  +  LA   +VQ   G  H +VLT  G V     
Sbjct: 3   VYSWGRGEDGQLGL--GDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGR 60

Query: 137 ----TCTHKENGCGSDP-------SQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                  H +NG    P        + ++       HT   +++  G+LYTWG   YG++
Sbjct: 61  GDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVS--GDLYTWGGGMYGKL 118

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
           G  N  T  + P  VE+L  + +  +ACG+ H+ VL
Sbjct: 119 GHGN-ETGHSTPFLVETLKGMQVRQVACGSRHTVVL 153


>gi|408500851|ref|YP_006864770.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465675|gb|AFU71204.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1070

 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 145/321 (45%), Gaps = 62/321 (19%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           SLA+   G+ + WG +T+GQLG   A   S+S P  V+    V        +++  V   
Sbjct: 572 SLAVGSDGKAYAWGDNTYGQLG--DATTNSRSTPNIVRKPTGVPT-----DFTYVQV--- 621

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS-------VSVVQ 119
           + G WHSLAL   G V+ WG + HGQLG  +  K + S+P RV+  A+       +  +Q
Sbjct: 622 SAGKWHSLALGSDGYVYAWGSNQHGQLGNNT--KTNSSVPVRVRDPANPTDPNKGLKAIQ 679

Query: 120 ACAGYSHCLVLTSSG-VVTCTHKENG--------------------CGSDPSQGVQSNLV 158
             AG  H L L S+G V      +NG                      +DPS+G+++  V
Sbjct: 680 VSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAVQV 739

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVN-------LPIALI 211
                   ++ S G  Y WG N YGQ+G N+S  + + P RV    +       L    +
Sbjct: 740 SAGWHHSLAVGSDGYTYAWGLNNYGQLG-NSSKNSSSFPVRVRDFASPNDANKGLKAVQV 798

Query: 212 ACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKT-PQLIHGPWIASPVAMTAGEDSL 270
           + G +HS  +  S    YA+G+ +  QL +  +V  T P  +  P        T+ +D+ 
Sbjct: 799 SAGYSHSLAVG-SDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDP--------TSPKDA- 848

Query: 271 VSHSGGLVVKKIYSGGDHSIV 291
              S GL    I +GG+HS+ 
Sbjct: 849 ---SKGLKATAINAGGEHSLA 866



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 96/224 (42%), Gaps = 61/224 (27%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS-------VSVVQAC 55
           G  HSLA+   G  + WG + +GQLG  S  K S S P RV+  AS       +  VQ  
Sbjct: 742 GWHHSLAVGSDGYTYAWGLNNYGQLGNSS--KNSSSFPVRVRDFASPNDANKGLKAVQVS 799

Query: 56  AGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV------ 109
           AGYSH            SLA+   G  + WG + +GQLG  +++    ++P RV      
Sbjct: 800 AGYSH------------SLAVGSDGYTYAWGLNNYGQLG--NSNTVDSTVPVRVRDPTSP 845

Query: 110 ----KGLASVSVVQACAGYSHCLVL---------------------TSSGVVTCTHKENG 144
               KGL + ++    AG  H L +                     TS+  V    ++  
Sbjct: 846 KDASKGLKATAI---NAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPT 902

Query: 145 CGSDPSQGVQSNL--VQDSHTTITSLNSPGELYTWGNNEYGQMG 186
             +D S+G+Q+    V D H+     N  G  Y WG N YGQ+G
Sbjct: 903 SPADASKGLQATRFSVGDHHSLAVGSN--GYAYAWGENSYGQLG 944


>gi|428163938|gb|EKX32984.1| hypothetical protein GUITHDRAFT_148230 [Guillardia theta CCMP2712]
          Length = 614

 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 22/202 (10%)

Query: 901  KVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRI 960
            +V+Y  FY   +  + D   D+ RW   +    +    C++PF+ D   K+ LL++D   
Sbjct: 377  RVSYKEFYNDAINELVDFTEDFARWKDTQRCPFS---FCDHPFVLDPSTKSKLLQLDANN 433

Query: 961  QMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIREL-AQYTTND--FKKPLK 1017
            QM     Q    LF   F  +    YL ++V R+N++ DT+ ++ AQ   N+   KKPLK
Sbjct: 434  QMR---TQIRSALFRSIFGGNEC-PYLILKVRRENLIRDTLVQISAQQDGNETFLKKPLK 489

Query: 1018 VNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSED 1077
            V             F+GEE  D GGV++EF  L+++++ D  YGMF   +++R+ WFS  
Sbjct: 490  V------------VFKGEEGIDEGGVQKEFFQLIVRQMFDLNYGMFTYDDDSRTFWFSAT 537

Query: 1078 TFEDQNMYFLIGKEYVPCTYIS 1099
              E+   + LIGK +    Y S
Sbjct: 538  ALENAREFNLIGKVFGLAIYNS 559



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 62/91 (68%), Gaps = 4/91 (4%)

Query: 719 HYGITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILD-E 776
           +YG+  Y++ +R+ WFS    E+     LIG + GLAIYN  I+++ FP+ +YKK++  +
Sbjct: 519 NYGMFTYDDDSRTFWFSATALENAREFNLIGKVFGLAIYNSVILDVHFPMVVYKKLMGFQ 578

Query: 777 PILLQDLKDLSPTLAKSLQDILDYREPDLED 807
           P LL DLKD +P LA+ LQ +LD+ + D+E+
Sbjct: 579 PCLL-DLKDCNPGLARGLQSLLDF-DGDVEE 607


>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Anolis carolinensis]
          Length = 4963

 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 520 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 575

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 576 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 622

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 623 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 678

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 679 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLA 734



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 116/248 (46%), Gaps = 56/248 (22%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4184 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4241

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            +             G++FT+G   +G+LGL +   K   +P+RV  L    + +   G +
Sbjct: 4242 AD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVAALEGYQIGEVACGLN 4287

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H LV+++ G +                                     ++ +G+ +YG++
Sbjct: 4288 HTLVVSTDGSM-------------------------------------VWAFGDGDYGKL 4310

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4311 GLGNS-TAKSSPQKVDILCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4368

Query: 246  -HKTPQLI 252
             H  PQ +
Sbjct: 4369 NHNRPQQV 4376



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4137 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4185

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T+ 
Sbjct: 4186 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTAD 4243

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4244 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4265

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+ V+S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4266 -KLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 4324



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 118/259 (45%), Gaps = 34/259 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + +   G +H L
Sbjct: 4233 GFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNK--KLPERVAALEGYQIGEVACGLNHTL 4290

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            V+++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4291 VVST-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDILCGIGIKKVAC 4337

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ--GVQSNLVQD-----SHTTIT 166
            G    + LT  G V    ++   G         + P Q   +    V+D      HT   
Sbjct: 4338 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHT--L 4395

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L++ G++Y WG+N  GQ+G+ ++N  V +P  V SL    +  I+ G  HS   S    
Sbjct: 4396 ALSASGDVYAWGSNSEGQLGLGHTN-HVREPTLVTSLQGKSVRQISAGRCHSAAWSSPPV 4454

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G+   +QL  P +V
Sbjct: 4455 PPRAPGVSVPLQLGLPDAV 4473



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 412 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 461

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 462 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 518

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 519 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 540

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 541 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 592

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 593 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 630



 Score = 60.1 bits (144), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 623 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 679

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  V++ Q  
Sbjct: 680 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGVAIQQIS 726

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 727 AGTSHSLAWTA 737


>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
           (Silurana) tropicalis]
          Length = 4842

 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 113/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK V+ L  +   + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVVEALQGMFTRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLA 732



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 117/248 (47%), Gaps = 56/248 (22%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4074 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4131

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            +             G++FT+G   +G+LGL +   K   +P+RV  L  + + Q   G +
Sbjct: 4132 AD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGLHIGQVACGLN 4177

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 4178 HTLAVSADGSL-------------------------------------VWAFGDGDYGKL 4200

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4201 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4258

Query: 246  -HKTPQLI 252
             H  PQL+
Sbjct: 4259 NHNRPQLV 4266



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4027 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4075

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T+ 
Sbjct: 4076 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTAD 4133

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4134 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4155

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L  L I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4156 -KLPERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNSTAKSSPQKV 4214



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 34/256 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L  + + Q   G +H L
Sbjct: 4123 GFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGLHIGQVACGLNHTL 4180

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++   L           V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4181 AVSADGSL-----------VWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 4227

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQ----------------DSHTTIT 166
            G    + LT  G V    ++   G    +    N  Q                  HT   
Sbjct: 4228 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHT--L 4285

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L++ GE+Y WG+N  GQ+G+ ++N  V +P  V +L    I  I+ G  HS   + +  
Sbjct: 4286 ALSASGEVYAWGSNSEGQLGLGHTN-HVREPTLVTALQGKNIRQISAGRCHSAAWTAAPV 4344

Query: 227  RLYAFGIGSAVQLDSP 242
               A G+   +QL  P
Sbjct: 4345 PPRAPGVAVPLQLGLP 4360



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  V++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGVAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735



 Score = 48.1 bits (113), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 98/232 (42%), Gaps = 34/232 (14%)

Query: 31  SADKKSQSIPKRVK-GLASV---------SVVQACAGYSHCLVLTSTTGLWHSLALNDCG 80
           SAD+     P R   GL S+          V Q  + YS       +     +  +++  
Sbjct: 313 SADRSQWREPTRTSDGLCSLYEAALCLFEEVCQMASDYSRTCASPDSIQSGENPVVSETC 372

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
           EV+ WG ++  QL   + +K  Q  PK     +    ++A  G     V+++ G V    
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ--PKLAPCFSDAQTIEA--GQYCTFVISTDGSVRACG 428

Query: 141 KEN----GCGSDPSQGVQSNLVQDSHTTITSLNSP-------------GELYTWGNNEYG 183
           K +    G G   +Q     L  + H +I  ++S              GE+++WG+ +YG
Sbjct: 429 KGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 184 QMGINNSNTTVTKPQRVE-SLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
           ++G  NS+T    P+ ++ +L    +  ++ G  HS  +++    LY +G G
Sbjct: 489 KLGHGNSSTQ-KYPKLIQGTLQGKVVVCVSAGYRHSAAVTED-GELYTWGEG 538


>gi|340522592|gb|EGR52825.1| predicted protein [Trichoderma reesei QM6a]
          Length = 1167

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 105/195 (53%), Gaps = 23/195 (11%)

Query: 898  GGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMD 957
            GG  +  T FY   +    D+  D+  W S R    +R   C YPF+    AKT +LE D
Sbjct: 715  GGYFLPPTDFYN-SMIDYTDLIDDFESWESRR----SRFSFCQYPFLLSIWAKTHILEHD 769

Query: 958  QRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTN---DFKK 1014
             R QM+       F   +   N   +NQYL ++V RD +V+D++  ++    +   D KK
Sbjct: 770  ARRQMQSKARDAFFDSIMTRRN---INQYLVLDVRRDCLVDDSLTAVSSVIGSGGEDLKK 826

Query: 1015 PLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWF 1074
             L+++            F+GEE  DAGG+R+E+ +LL++E+ +P YGMF   ++++  +F
Sbjct: 827  GLRIS------------FQGEEGIDAGGLRKEWFLLLIREVFNPDYGMFIYDDDSQYCYF 874

Query: 1075 SEDTFEDQNMYFLIG 1089
            + ++FE  + +FL+G
Sbjct: 875  NPNSFEPSDQFFLVG 889



 Score = 50.8 bits (120), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 18/111 (16%)

Query: 720 YGITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL---- 774
           YG+  Y++ ++  +F+ ++FE  +  FL+G + GLAIYN TI+++  P   ++K+L    
Sbjct: 860 YGMFIYDDDSQYCYFNPNSFEPSDQFFLVGVVMGLAIYNSTILDVALPPFAFRKLLASAP 919

Query: 775 ----------DEPI--LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                       P+   L DL +  P LA  L+ +L + + D+E+ F + F
Sbjct: 920 SPPGTMAAQHRSPMRYTLDDLAEYRPRLANGLKQLLAF-DGDVEETFCLDF 969


>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
          Length = 1016

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 75/290 (25%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 248 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 305

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 306 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 351

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           H L +++ G +                                     ++ +G+ +YG++
Sbjct: 352 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 374

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
           G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 375 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 432

Query: 246 -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
            H  PQ I  P +A                 G+V++ +  G +H++   +
Sbjct: 433 NHNRPQQI--PVLA-----------------GVVIEDVAVGAEHTLALAS 463



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
           G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 201 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 249

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
           +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 250 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 307

Query: 134 GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                 G+L+T+GN +YG++G+ N++  
Sbjct: 308 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 329

Query: 194 VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
              P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 330 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 388



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 297 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 354

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 355 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 401

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
           G    + LT  G V    ++   G         + P Q     GV    V        +L
Sbjct: 402 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 461

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
            S G++Y WG+N  GQ+G+ ++N  V +P  V  L    I  I+ G  HS   +      
Sbjct: 462 ASTGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPP 520

Query: 229 YAFGIGSAVQLDSPKSV 245
            A G+   +QL  P +V
Sbjct: 521 RAPGVSVPLQLGLPDTV 537


>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
           guttata]
          Length = 4864

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 112/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +  ++V +   G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDI--INVGEVSCGSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  I+ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVGGLDGIAIQQISAGTSHSLA 732



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 56/248 (22%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4096 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4153

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            +             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 4154 AD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4199

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H + +++ G +                                     ++ +G+ +YG++
Sbjct: 4200 HTVAVSTDGSM-------------------------------------VWAFGDGDYGKL 4222

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 4223 GLGNS-TAKSSPQKVDILCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4280

Query: 246  -HKTPQLI 252
             H  PQ +
Sbjct: 4281 NHNRPQQV 4288



 Score = 94.0 bits (232), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 4049 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4097

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T+ 
Sbjct: 4098 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTAD 4155

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 4156 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4177

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 4178 -KLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 4236



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 121/291 (41%), Gaps = 73/291 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++G++G  +SN+    P  V+ ++N  +  ++CG++H+  LSK    +++FG G     D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDIIN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
           + K  H     ++ P +   +              G+ ++K+ +G   S+ 
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLA 628



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 110/256 (42%), Gaps = 34/256 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H +
Sbjct: 4145 GFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTV 4202

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 4203 AVST-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDILCGIGIKKVAC 4249

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQD----------------SHTTIT 166
            G    + LT  G V    ++   G    +    N  Q                  HT   
Sbjct: 4250 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPLLAGVFIEDIAVGAEHT--L 4307

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L+S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +    
Sbjct: 4308 ALSSTGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPV 4366

Query: 227  RLYAFGIGSAVQLDSP 242
               A G+   +QL  P
Sbjct: 4367 PPRAPGVSVPLQLGLP 4382



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHC 677

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVGGLDGIAIQQIS 724

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 725 AGTSHSLAWTA 735


>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
          Length = 3507

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 2739 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 2796

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 2797 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 2842

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 2843 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 2865

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 2866 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 2923

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G+V++ +  G +H++ 
Sbjct: 2924 NHNRPQQI--PVLA-----------------GVVIEDVAVGAEHTLA 2951



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 2692 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 2740

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 2741 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 2798

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 2799 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 2820

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 2821 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 2879



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 2788 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 2845

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 2846 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 2892

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
            G    + LT  G V    ++   G         + P Q     GV    V        +L
Sbjct: 2893 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 2952

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
             S G++Y WG+N  GQ+G+ ++N  V +P  V  L    I  I+ G  HS   +      
Sbjct: 2953 ASTGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPVPP 3011

Query: 229  YAFGIGSAVQLDSPKSV 245
             A G+   +QL  P +V
Sbjct: 3012 RAPGVSVPLQLGLPDAV 3028


>gi|156044818|ref|XP_001588965.1| hypothetical protein SS1G_10513 [Sclerotinia sclerotiorum 1980]
 gi|154694901|gb|EDN94639.1| hypothetical protein SS1G_10513 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 1236

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 107/202 (52%), Gaps = 24/202 (11%)

Query: 891  IRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAK 950
            IR  A HG  ++  T+ +   L    D+  D+  W S R    ++   C YPF     AK
Sbjct: 778  IRALAAHG--QMLPTSHFYNTLLDYSDLVADFEAWESKR----SKFAFCQYPFFLSIWAK 831

Query: 951  TTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIR---ELAQY 1007
              ++E D R QME    +  F   +   N   +NQYL ++V R+ +VED+++   E+   
Sbjct: 832  IQIMEHDARRQMEVKAREAFFNSIMTRKN---VNQYLLLKVRRECLVEDSLKGVSEVVGT 888

Query: 1008 TTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYE 1067
               + KK L++            +F+GEE  DAGG+R+E+ +LL++++ +P +GMF   E
Sbjct: 889  GGEEIKKGLRI------------EFKGEEGIDAGGLRKEWFLLLVRDVFNPDHGMFSYDE 936

Query: 1068 ETRSIWFSEDTFEDQNMYFLIG 1089
            ++   +F+ ++FE  + YFL+G
Sbjct: 937  DSHFCYFNPNSFETTDQYFLVG 958



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 59/107 (55%), Gaps = 18/107 (16%)

Query: 720  YGITEYEETRSI-WFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILD--- 775
            +G+  Y+E     +F+ ++FE  +  FL+G + GLAIYN TI+++  P   ++K+L    
Sbjct: 929  HGMFSYDEDSHFCYFNPNSFETTDQYFLVGVVLGLAIYNSTILDVALPPFAFRKLLAAAP 988

Query: 776  ----------EPIL---LQDLKDLSPTLAKSLQDILDYREPDLEDVF 809
                      +P +   L+DL +  P+LA  L+ +L++ + D+E  F
Sbjct: 989  AAAPGATSHAKPSMTYSLEDLAEFRPSLAHGLRQLLEF-DGDVETTF 1034


>gi|358399691|gb|EHK49028.1| hypothetical protein TRIATDRAFT_161743, partial [Trichoderma
            atroviride IMI 206040]
          Length = 1142

 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 31/200 (15%)

Query: 899  GRKVAY----TAFY--MPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTT 952
            GR   Y    T FY  M D A + D   D+  W S R   S     C YPF+    AKT 
Sbjct: 726  GRVAGYFLPPTDFYNSMIDYADLID---DFESWESKRSKFS----FCQYPFLLSIWAKTH 778

Query: 953  LLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTN-- 1010
            +LE D R QM+       F   +   N   +NQYL +++ RD +V+D++  ++    +  
Sbjct: 779  ILEHDARRQMQSKARDAFFDSIMTRRN---INQYLFLDIRRDCLVDDSLTAVSSVIGSGG 835

Query: 1011 -DFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEET 1069
             D KK L+++            F+GEE  DAGG+R+E+ +LL++E+ +P YGMF   +++
Sbjct: 836  EDLKKGLRIS------------FQGEEGIDAGGLRKEWFLLLIREVFNPDYGMFIYDDDS 883

Query: 1070 RSIWFSEDTFEDQNMYFLIG 1089
            +  +F+ ++FE  + +FL+G
Sbjct: 884  QYCYFNPNSFEPSDQFFLVG 903



 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 18/111 (16%)

Query: 720 YGITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL---- 774
           YG+  Y++ ++  +F+ ++FE  +  FL+G + GLAIYN TI+++  P   ++K+L    
Sbjct: 874 YGMFIYDDDSQYCYFNPNSFEPSDQFFLVGVVMGLAIYNSTILDVALPPLAFRKLLASAP 933

Query: 775 ---------DEPIL---LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                      P++   L DL +  P LA  L+ +L + + D+E+ F + F
Sbjct: 934 SLAGTMPQQHRPVIRYTLDDLSEYRPRLANGLRQLLAF-DGDVEETFCLDF 983


>gi|322695617|gb|EFY87422.1| ubiquitin-protein ligase (Hul4), putative [Metarhizium acridum CQMa
            102]
          Length = 743

 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 118/238 (49%), Gaps = 25/238 (10%)

Query: 857  RKLSFCLQVLQKLNSLNNETLTSSISAGGRTVS--NIRTPAPHGGRKVAYTAFYMPDLAT 914
            +  S  L +L   NS        S +A G  V+  + R      G+ V  T FY   +  
Sbjct: 248  KAASRVLALLFAANSAPGIRHGYSTTAAGVNVAAGSTREYGHSSGQLVPTTDFYN-SMID 306

Query: 915  VCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLF 974
              D+  D+  W S R   S     C YPF+    AKT +LE D + QM+  M   + +L 
Sbjct: 307  YADLVSDFESWESKRSKFS----FCQYPFLMSIWAKTHILEHDAKRQMQ--MKARDAFLD 360

Query: 975  LQTFNPHTLNQYLEVEVSRDNIVEDT---IRELAQYTTNDFKKPLKVNDTSPIYLAPQVK 1031
                N   + QYL ++V R+ +VED+   + E+    + D KK L++             
Sbjct: 361  SIMTN-RNVKQYLSLDVRRECLVEDSLAAVSEVIGSGSEDVKKGLRIT------------ 407

Query: 1032 FRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            FRGEE  DAGG+R+E+ +LL++E+ +P +GMF   E+++  +F+  TFE  + +FL+G
Sbjct: 408  FRGEEGIDAGGLRKEWFLLLIREVFNPDHGMFLYDEDSQYCYFNPATFETSDQFFLVG 465



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 17/104 (16%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL----------- 774
           E+++  +F+  TFE  +  FL+G + GLAIYN TI+++  P   ++K+L           
Sbjct: 443 EDSQYCYFNPATFETSDQFFLVGVVMGLAIYNSTILDVALPPFAFRKLLAAAPAHGLGMS 502

Query: 775 --DEPIL---LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
               P +   L+DL +  P +A+ L+ +LD+ E D+E  F + F
Sbjct: 503 SRPRPSMQYTLEDLAEYRPRVARGLRQLLDF-EGDVESAFSLDF 545


>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
            anubis]
          Length = 3314

 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 129/287 (44%), Gaps = 75/287 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 2546 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 2603

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 2604 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 2649

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 2650 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 2672

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+++ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 2673 GLGNS-TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 2730

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ I  P +A                 G++++ +  G +H++ 
Sbjct: 2731 NHNRPQQI--PVLA-----------------GMIIEDVAVGAEHTLA 2758



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 2499 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 2547

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 2548 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 2605

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 2606 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 2627

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ I
Sbjct: 2628 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKI 2686



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 114/259 (44%), Gaps = 34/259 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 2595 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 2652

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P+++  L  + + +   
Sbjct: 2653 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKIDVLCGIGIKKVAC 2699

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN-----------LVQD-----SHTTIT 166
            G    + LT  G V    ++   G    +    N           +++D      HT   
Sbjct: 2700 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHT--L 2757

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +    
Sbjct: 2758 ALASNGDVYAWGSNSEGQLGLGHTN-HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 2816

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G+   +QL  P ++
Sbjct: 2817 PPRAPGVSVPLQLGLPDTL 2835


>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
          Length = 657

 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 119/255 (46%), Gaps = 34/255 (13%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
           G V+TWG    G+LG    D   + +P+    LA   +               T G +H+
Sbjct: 26  GGVYTWGRGDDGRLG--HGDNGWKYVPRLTHSLAGQVITHV------------TCGSYHT 71

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            A++  G +FTWGG  +G+LG    ++   S PKRV  L  ++VV    G  H  ++TS 
Sbjct: 72  AAVSSKGNLFTWGGGMYGKLG--HGNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVTSR 129

Query: 134 GVV-TCTHKENG-CGSDPSQGVQ-----------SNLVQDSHTTITS--LNSPGELYTWG 178
           G + T   KENG  G   ++G Q             +VQ S     +  L   GE+YTWG
Sbjct: 130 GCLYTWGDKENGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWG 189

Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
             ++G++G + +      P+ VE+L+      I+CG  HS V++    ++Y FG G   Q
Sbjct: 190 EGKFGRLG-HGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTAD-GKMYTFGGGEHGQ 247

Query: 239 LDSPKSVHKT-PQLI 252
           L     V+K  P L+
Sbjct: 248 LGHGDKVNKVKPTLV 262



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 125/292 (42%), Gaps = 70/292 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+ A++  G +FTWGG  +G+LG    ++   S PKRV  L  ++VV    G  H  
Sbjct: 67  GSYHTAAVSSKGNLFTWGGGMYGKLG--HGNESGHSTPKRVDSLVGLAVVDIACGSRHTA 124

Query: 63  VLTSTTGLW-----------------------------------------HSLALNDCGE 81
           ++TS   L+                                         H+  L D GE
Sbjct: 125 IVTSRGCLYTWGDKENGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGE 184

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV----T 137
           V+TWG    G+LG   A++   S P+ V+ L     VQ   G  H  V+T+ G +     
Sbjct: 185 VYTWGEGKFGRLG-HGAERNCHS-PRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGG 242

Query: 138 CTHKENGCGSDPSQGVQSNLVQD-------------SHTTITSLNSPGELYTWGNNEYGQ 184
             H + G G D    V+  LV+D             SH+   +L S  E+YTWGN ++G+
Sbjct: 243 GEHGQLGHG-DKVNKVKPTLVKDLDGVFLTQITCGWSHSV--ALTSSHEVYTWGNGDHGK 299

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL----SKSVSRLYAFG 232
           +G +     V+ PQ VE LV   +  +A    H+  L    S + SR +A G
Sbjct: 300 LG-HGCGKKVSTPQLVEKLVGQKVVCVASYNEHTACLVEPHSVNASRRHAPG 350


>gi|345487340|ref|XP_003425675.1| PREDICTED: ubiquitin-protein ligase E3A-like [Nasonia vitripennis]
          Length = 862

 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 137/310 (44%), Gaps = 49/310 (15%)

Query: 788  PTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFER-----LILIFKQCLIYLLQQ 842
            P+L ++LQ ++  +      V G +F   Y +   D          IL +   L   L  
Sbjct: 334  PSLLQALQQLITVK------VIGGSFTRDYCVQDTDTITAPTKVMKILYYASILAGELDS 387

Query: 843  PGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKV 902
            P +    +G+   + K S   + +   + L  E   SS+ A        R P       +
Sbjct: 388  PDLAHDEDGEANSSEKPS--QRTVTPQDPLAVELAISSLDA--------RIPL------I 431

Query: 903  AYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQM 962
             +T FY   L+   ++  D+  + S +P   +     NY FI     K+  L  D RI+M
Sbjct: 432  PFTDFYNEPLSDAVEMDKDFAYYKSEQPMKFS---FMNYAFILTPATKSLGLYYDNRIRM 488

Query: 963  EHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIREL---AQYTTNDFKKPLKVN 1019
             +    +    FLQT      N YL ++V RD+++ED + EL   A     D KK L V 
Sbjct: 489  YNERRMS----FLQTVVGQPTNPYLRLKVRRDHLIEDALVELEVVAMENPYDLKKQLVV- 543

Query: 1020 DTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTF 1079
                       +F GE+  D GGV +EF  L+++EI +P YGMF   E+T+++WF+  +F
Sbjct: 544  -----------EFEGEQGVDEGGVSKEFFQLVVEEIFNPDYGMFTTQEDTQTMWFNPTSF 592

Query: 1080 EDQNMYFLIG 1089
            E    + LIG
Sbjct: 593  ESDAQFTLIG 602



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 63/99 (63%), Gaps = 1/99 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T  E+T+++WF+  +FE      LIG + GLAIYN  I+++ FP+ +Y+K+L    
Sbjct: 573 YGMFTTQEDTQTMWFNPTSFESDAQFTLIGVVLGLAIYNNVILDVRFPMVVYRKLLGRKG 632

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
              DL+D +PTL +++ ++L+Y   D+ D F  TF+  Y
Sbjct: 633 SFSDLEDWNPTLYRTMMEMLEYTGDDMSDTFMQTFKVGY 671


>gi|358386856|gb|EHK24451.1| hypothetical protein TRIVIDRAFT_122664, partial [Trichoderma virens
            Gv29-8]
          Length = 1184

 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 103/190 (54%), Gaps = 27/190 (14%)

Query: 905  TAFY--MPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQM 962
            T FY  M D A + D   D+  W S R   S     C YPF+    AKT +LE D R QM
Sbjct: 740  TDFYNSMIDYADLID---DFESWESKRGKFS----FCQYPFLLSIWAKTHILEHDARRQM 792

Query: 963  EHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTN---DFKKPLKVN 1019
            +       F   +   N   +NQYL ++V RD +V+D++  ++    +   D KK L+++
Sbjct: 793  QSKARDAFFDSIMTRRN---INQYLVLDVRRDCLVDDSLTAVSSVIGSGGEDLKKGLRIS 849

Query: 1020 DTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTF 1079
                        F+GEE  DAGG+R+E+ +LL++E+ +P YGMF   ++++  +F+ ++F
Sbjct: 850  ------------FQGEEGIDAGGLRKEWFLLLIREVFNPDYGMFIYDDDSQYCYFNPNSF 897

Query: 1080 EDQNMYFLIG 1089
            E  + +FL+G
Sbjct: 898  EPSDQFFLVG 907



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 17/110 (15%)

Query: 720 YGITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL---- 774
           YG+  Y++ ++  +F+ ++FE  +  FL+G + GLAIYN TI+++  P   ++K+L    
Sbjct: 878 YGMFIYDDDSQYCYFNPNSFEPSDQFFLVGVVMGLAIYNSTILDVALPPFAFRKLLASAP 937

Query: 775 ---------DEPI--LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                      P+   L DL +  P LA  L+ +L + + D+E+ F + F
Sbjct: 938 SPPGSIITHRSPMRYTLDDLAEYLPRLANGLRQLLAF-DGDVEETFCLDF 986


>gi|345565108|gb|EGX48063.1| hypothetical protein AOL_s00081g167 [Arthrobotrys oligospora ATCC
            24927]
          Length = 1106

 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 96/178 (53%), Gaps = 24/178 (13%)

Query: 916  CDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF-YLF 974
             D+  DY +W +     S +   C YPF+    +K  +LE D + QME    +  F  + 
Sbjct: 659  ADLIADYDQWEAK----SGKFSFCQYPFLLSMGSKIQILEYDAKRQMEVKAREAFFNSIG 714

Query: 975  LQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQY---TTNDFKKPLKVNDTSPIYLAPQVK 1031
            L+     T NQYL + V RD +VED+++ +++       D KK LK+            +
Sbjct: 715  LR----RTFNQYLLLRVRRDCLVEDSLKRISESVGGAGGDIKKGLKI------------E 758

Query: 1032 FRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            F GE+  D GG+R+E+ +LL+++I DP++GMF   E++R  +F+  TFE    YFL+G
Sbjct: 759  FEGEDGIDIGGLRKEWFLLLIRDIFDPRHGMFVYDEDSRYCYFNPHTFEATEQYFLVG 816



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 26/118 (22%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           P++G+  Y     E++R  +F+  TFE     FL+G L G+AIYN TI+++  P  ++KK
Sbjct: 785 PRHGMFVYD----EDSRYCYFNPHTFEATEQYFLVGVLLGMAIYNSTILDVALPPVVFKK 840

Query: 773 ILDEPIL---------------------LQDLKDLSPTLAKSLQDILDYREPDLEDVF 809
           +L                          L+DL    P LA  L+ +L++ E D+E  F
Sbjct: 841 LLSPSSTVSTPSKFSTPSPTARLPFTSTLEDLALFRPALANGLRQLLEF-EGDVESTF 897


>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
            [Sus scrofa]
          Length = 2561

 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 75/290 (25%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 1704 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 1761

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 1762 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 1807

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 1808 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 1830

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 1831 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 1888

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
             H  PQ I  P +A                 G+V++ +  G +H++   +
Sbjct: 1889 NHNRPQQI--PVLA-----------------GVVIEDVAVGAEHTLALAS 1919



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 1657 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 1705

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 1706 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 1763

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 1764 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 1785

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ +
Sbjct: 1786 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKV 1844



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 30/257 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 1753 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 1810

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P++V  L  + + +   
Sbjct: 1811 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVAC 1857

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITSL 168
            G    + LT  G V    ++   G         + P Q     GV    V        +L
Sbjct: 1858 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 1917

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
             S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +      
Sbjct: 1918 ASTGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPP 1976

Query: 229  YAFGIGSAVQLDSPKSV 245
             A G+   +QL  P +V
Sbjct: 1977 RAPGVSVPLQLGLPDAV 1993


>gi|281205292|gb|EFA79484.1| ankyrin repeat-containing protein [Polysphondylium pallidum PN500]
          Length = 903

 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 118/249 (47%), Gaps = 31/249 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL++ G V+ WG  + G+LGL   + +  SIPK +       +     G     
Sbjct: 268 GKDHSLALDEIGVVYAWGNGSGGRLGL--GNSEVVSIPKIIPHFEDEKITSIACGQEF-- 323

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     SLAL+D G+VF+WG   HG LG + +   SQS PK +  L   S  Q   
Sbjct: 324 ----------SLALSDSGKVFSWGKGLHGNLGYDVSTMLSQSTPKVIPMLPPAS--QISC 371

Query: 123 GYSHCLVLTSSGVV-------TCTHKENGCGSDPSQ---GVQSNLVQDSHTTITSLNSPG 172
           G  H +VL+ SG V        C    +G GS P+    G +   +         L+   
Sbjct: 372 GNWHSMVLSKSGDVYTFGSNIDCRLGHSGNGSTPTMVQIGSKIKKIGAGANFNAVLSESN 431

Query: 173 ELYTWGNNEYGQMGI---NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
            +YTWG+N + Q+G+   ++ N T  +PQ V++L+  PI+ I  G  H  VL+ +   ++
Sbjct: 432 AIYTWGSNIHCQLGVLLPDHRNYT-GEPQVVKTLLPYPISTIEVGYEHVVVLTDT-GEVF 489

Query: 230 AFGIGSAVQ 238
            FG  S +Q
Sbjct: 490 TFGDNSMMQ 498


>gi|70990728|ref|XP_750213.1| ubiquitin-protein ligase (Hul4) [Aspergillus fumigatus Af293]
 gi|66847845|gb|EAL88175.1| ubiquitin-protein ligase (Hul4), putative [Aspergillus fumigatus
            Af293]
 gi|159130690|gb|EDP55803.1| ubiquitin-protein ligase (Hul4), putative [Aspergillus fumigatus
            A1163]
          Length = 1201

 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 117/235 (49%), Gaps = 20/235 (8%)

Query: 858  KLSFCLQVLQKLNSLNNETLTSSISAG-GRTVSNI--RTPAPHGGRKVAYTAFYMPDLAT 914
            ++    +V+  L + NN +      A  G+   ++  R  A   G KV  +AFY   L  
Sbjct: 707  QIRAAARVMSLLFTANNTSAARKPDAAFGQEAGSLANRAAANRRGHKVPISAFYN-TLLD 765

Query: 915  VCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLF 974
              D+  D+  W S     S     C YP+     AK  ++E D R QME    +  F   
Sbjct: 766  YSDLVADFEAWESKMAKFS----FCQYPYFLSIWAKIHIMEHDARRQMEVKAREAFFNSI 821

Query: 975  LQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRG 1034
            L       ++QYL ++V RD +V+D++R +++   ++ ++         I    +++F G
Sbjct: 822  LSR---KAISQYLVLKVRRDCLVDDSLRSVSEVVGSNQEE---------IKKGLRIEFVG 869

Query: 1035 EEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            EE  DAGG+R+E+ +LL++EI DP +G+F   E++R  +F+   FE    +FL+G
Sbjct: 870  EEGVDAGGLRKEWFLLLVREIFDPHHGLFLYDEDSRFCYFNPYCFESSEQFFLVG 924



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 18/112 (16%)

Query: 719  HYGITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL--- 774
            H+G+  Y+E +R  +F+   FE     FL+G L GLAIYN TI+++  P   +KK+L   
Sbjct: 894  HHGLFLYDEDSRFCYFNPYCFESSEQFFLVGVLLGLAIYNSTILDIALPPFAFKKLLAAA 953

Query: 775  -----DEP--------ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                  +P          L DL +  P LAK L+ +L++ + D+ D F   F
Sbjct: 954  PQTSGPQPSSARSNYRCTLDDLAEYRPALAKGLRALLEF-DGDVADTFCYDF 1004


>gi|440635810|gb|ELR05729.1| hypothetical protein GMDG_07572 [Geomyces destructans 20631-21]
          Length = 1192

 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 106/203 (52%), Gaps = 26/203 (12%)

Query: 894  PAPH----GGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKA 949
            P PH      +++  T+ +   L    D+  D+  W + +     +   C YPF     A
Sbjct: 731  PIPHEHTYHRKQILPTSHFYNTLLDYSDLIADFEAWEAKK----GKFTFCQYPFFLSIWA 786

Query: 950  KTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIR---ELAQ 1006
            K  ++E D R QME    +     F       ++NQYL ++V RD +VED+++   E+  
Sbjct: 787  KIQIMEHDARRQMEIKAREA---FFDSIMTRKSVNQYLVLKVRRDCLVEDSLKGVSEVVG 843

Query: 1007 YTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEY 1066
             +  + KK L++            +F+GEE  DAGG+R+E+ +LL++++L+P++GMF   
Sbjct: 844  ASGEEIKKGLRI------------EFKGEEGIDAGGLRKEWFLLLVRDVLNPEHGMFVYD 891

Query: 1067 EETRSIWFSEDTFEDQNMYFLIG 1089
            EE+   +F+  +FE  + +FL+G
Sbjct: 892  EESHVCYFNPSSFETSDQFFLVG 914



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 17/104 (16%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL----------- 774
           EE+   +F+  +FE  +  FL+G + GLAIYN TI+++  P   ++K+L           
Sbjct: 892 EESHVCYFNPSSFETSDQFFLVGVVLGLAIYNSTILDVALPPFAFRKLLAAGPSSLPGSP 951

Query: 775 --DEPIL---LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
              +P +   L DL +  P+LA  L+ +L++ + D+E+ F   F
Sbjct: 952 SHAKPTMVYTLDDLAEYRPSLAHGLRQLLEF-DGDVEETFCRDF 994


>gi|321471075|gb|EFX82049.1| hypothetical protein DAPPUDRAFT_210805 [Daphnia pulex]
          Length = 510

 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 124/274 (45%), Gaps = 33/274 (12%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
           +V+  G ++ G LGL   D  S   P++++ L    +     G          +GL H L
Sbjct: 20  DVYAMGCNSSGCLGL--GDTASALQPRKIESLCKKKIKGLAYG----------SGL-HLL 66

Query: 75  ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYSHCLVLTSS 133
           A +D GE++TWG +T+ QLG  + +      P  V G LA  +V+Q   G  HCL LTS 
Sbjct: 67  AFSDSGELYTWGYNTYSQLG--NGNTNHTLTPSLVSGVLAGKTVIQVGCGNHHCLALTSE 124

Query: 134 GVVTCTHKENG--CGSDPSQG------VQSNL-------VQDSHTTITSLNSPGELYTWG 178
           G V    + NG  CGS  + G      V S +       +     T  +L   G+LY WG
Sbjct: 125 GEVFAWGQNNGGQCGSGTTTGQSVPRRVTSGIGGHKVVAIACGQLTSMALLDDGDLYGWG 184

Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
            N  G++GI N+N     P RV +L  + I  I CG  H   L+     LYA+G  S  Q
Sbjct: 185 YNGNGELGIGNNNNQ-HNPVRVSNLHKVFITQIVCGFAHCLALTDQ-GELYAWGANSYGQ 242

Query: 239 LDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVS 272
           L +    H    +I  P +   V + A   S +S
Sbjct: 243 LGTGYKTHHLSPVIVAPELGKAVEIAACHLSHIS 276



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 88/216 (40%), Gaps = 56/216 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV-KGLASVSVVQACAGYSHC 61
           G  H LAL   GEVF WG +  GQ G  S     QS+P+RV  G+    VV        C
Sbjct: 114 GNHHCLALTSEGEVFAWGQNNGGQCG--SGTTTGQSVPRRVTSGIGGHKVVAIA-----C 166

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
             LT       S+AL D G+++ WG + +G+LG+   +  +Q  P RV  L  V + Q  
Sbjct: 167 GQLT-------SMALLDDGDLYGWGYNGNGELGI--GNNNNQHNPVRVSNLHKVFITQIV 217

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G++HCL LT                                        GELY WG N 
Sbjct: 218 CGFAHCLALTDQ--------------------------------------GELYAWGANS 239

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANH 217
           YGQ+G     T    P  V   +   + + AC  +H
Sbjct: 240 YGQLG-TGYKTHHLSPVIVAPELGKAVEIAACHLSH 274


>gi|46123789|ref|XP_386448.1| hypothetical protein FG06272.1 [Gibberella zeae PH-1]
          Length = 1188

 Score =  100 bits (248), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 116/236 (49%), Gaps = 26/236 (11%)

Query: 857  RKLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVC 916
            R  S  L +L   N+L +       S+  R     R    H   ++  T+ +   +    
Sbjct: 726  RASSRVLALLFTANNLPHNRKNDETSSPSRE----RCTGAHAHGQILPTSDFYNSMIDYT 781

Query: 917  DIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQ 976
            D+  D+  W S +    ++   C YPF+    AKT +LE D R QM+          F  
Sbjct: 782  DLVADFENWESRK----SKFTFCQYPFLLSIWAKTHILEHDARRQMQSKARDA---FFDS 834

Query: 977  TFNPHTLNQYLEVEVSRDNIVEDTIRELAQYT---TNDFKKPLKVNDTSPIYLAPQVKFR 1033
              +   +NQ+LE+ V RD +V+D+++ +++     + D KK L++             F 
Sbjct: 835  IMSRKAINQFLELNVRRDCLVDDSLKAVSEVIGSGSEDIKKGLRIT------------FN 882

Query: 1034 GEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            GEE  DAGG+R+E+ +LL++E+ +P +G+F   E+++  +F+ + FE  + +FLIG
Sbjct: 883  GEEGVDAGGLRKEWFLLLVREVFNPDHGLFLYDEDSQYCYFNPNAFETSDQFFLIG 938



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 17/104 (16%)

Query: 726  EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL----------- 774
            E+++  +F+ + FE  +  FLIG + GLAIYN TI+++  P   ++K++           
Sbjct: 916  EDSQYCYFNPNAFETSDQFFLIGVVMGLAIYNSTILDVALPPFAFRKLIASAPTHGTGAS 975

Query: 775  --DEPIL---LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
               +P +   L+DL +  P LA+ L+ +L+Y E ++E+ F + F
Sbjct: 976  AHPKPPMRYTLEDLAEYRPRLARGLRQLLEY-EGNVEETFCLDF 1018


>gi|302916391|ref|XP_003052006.1| hypothetical protein NECHADRAFT_38788 [Nectria haematococca mpVI
            77-13-4]
 gi|256732945|gb|EEU46293.1| hypothetical protein NECHADRAFT_38788 [Nectria haematococca mpVI
            77-13-4]
          Length = 1195

 Score =  100 bits (248), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 106/196 (54%), Gaps = 24/196 (12%)

Query: 897  HGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEM 956
            HG  +V  T+ +   +    D+  D+  W + R   S     C YPF+    AK  +LE 
Sbjct: 743  HG--QVLPTSDFYNSMIDYTDLIADFENWEARRGKFS----FCQYPFLLSIWAKNHILEH 796

Query: 957  DQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYT---TNDFK 1013
            D R QM+   ++     F    +   +NQ+LE+ V RD +V+D+++ +++     + D K
Sbjct: 797  DARRQMQ---SKARDAFFDSIMSRKAINQFLELNVRRDCLVDDSLKAVSEVIGSGSEDIK 853

Query: 1014 KPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIW 1073
            K L++             F+GEE  DAGG+R+E+ +LL++E+ +P +GMF   E+++  +
Sbjct: 854  KGLRIT------------FKGEEGVDAGGLRKEWFLLLVREVFNPDHGMFIYDEDSQHCY 901

Query: 1074 FSEDTFEDQNMYFLIG 1089
            F+ ++FE  + +FL+G
Sbjct: 902  FNPNSFETSDQFFLVG 917



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 59/104 (56%), Gaps = 17/104 (16%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL----------- 774
           E+++  +F+ ++FE  +  FL+G + GLAIYN TI+++  P   ++K++           
Sbjct: 895 EDSQHCYFNPNSFETSDQFFLVGVVMGLAIYNSTILDLALPPFAFRKLIASAPTQGTGAS 954

Query: 775 --DEPIL---LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
               P +   L+DL +  P LA+ L+ +L+Y E ++E+ F + F
Sbjct: 955 SHPRPPMRYTLEDLAEYRPGLARGLRQLLEY-EGNVEETFALDF 997


>gi|226495691|ref|NP_001141854.1| uncharacterized protein LOC100273996 [Zea mays]
 gi|194706180|gb|ACF87174.1| unknown [Zea mays]
          Length = 391

 Score =  100 bits (248), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 135/302 (44%), Gaps = 50/302 (16%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +SLA+ + G +FTWG +  G LG      K++S P  V  LA + +VQA           
Sbjct: 52  NSLAICEDGRLFTWGWNQRGTLG-HPPKTKTESSPGPVHALAGLKIVQAA---------- 100

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKS------QSIPKRVKGLASVSVVQ 119
              G WH LA++D G  + WGG+ +GQ G E   K+       + IP   +    + V Q
Sbjct: 101 --IGGWHCLAVDDNGHAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQ 158

Query: 120 ACAGYSHCLVLTSSGVVTCTHKENGCG-----SDP--SQGVQS-NLVQDSHTTITSLNSP 171
             AG +H +VLT  G V    +    G     S P   QG++   ++        +L   
Sbjct: 159 VAAGGTHSVVLTQEGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTED 218

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G L+ WGNNEYGQ+G  ++    + P RVE L +L +  IA G  HS  L+     +YA+
Sbjct: 219 GILWAWGNNEYGQLGTGDTQPR-SHPIRVEGLSDLSLVDIAAGGWHSTALTIQ-GEVYAW 276

Query: 232 GIGSAVQL--DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHS 289
           G G   +L     KS    P           V + AGED          + ++  GG HS
Sbjct: 277 GRGEHGRLGFGDDKSSRMVPL---------KVELLAGED----------IVQVSCGGTHS 317

Query: 290 IV 291
           + 
Sbjct: 318 VA 319



 Score = 99.8 bits (247), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 117/277 (42%), Gaps = 81/277 (29%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKS------QSIPKRVKGLASVSVVQACA 56
           G WH LA++D G  + WGG+ +GQ G E   K+       + IP   +    + V Q  A
Sbjct: 102 GGWHCLAVDDNGHAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQVAA 161

Query: 57  GYSHCLVLTSTTGLW----------------------------------HSLALNDCGEV 82
           G +H +VLT    +W                                  H+LAL + G +
Sbjct: 162 GGTHSVVLTQEGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTEDGIL 221

Query: 83  FTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKE 142
           + WG + +GQLG  + D + +S P RV+GL+ +S+V   AG  H   LT           
Sbjct: 222 WAWGNNEYGQLG--TGDTQPRSHPIRVEGLSDLSLVDIAAGGWHSTALT----------- 268

Query: 143 NGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVES 202
                          +Q            GE+Y WG  E+G++G  +  ++   P +VE 
Sbjct: 269 ---------------IQ------------GEVYAWGRGEHGRLGFGDDKSSRMVPLKVEL 301

Query: 203 LVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           L    I  ++CG  HS  L++   R++++G G   +L
Sbjct: 302 LAGEDIVQVSCGGTHSVALTRD-GRMFSYGRGDHGRL 337



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 91/244 (37%), Gaps = 69/244 (28%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           V  WG    GQLG+   ++K  +    V+ L S +V    AG  +            SLA
Sbjct: 10  VLAWGSGEDGQLGMGGNEEKDWA--HCVEALGSYAVTAVVAGSRN------------SLA 55

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           + + G +FTWG +  G LG      K++S P  V  LA + +VQA  G  HCL       
Sbjct: 56  ICEDGRLFTWGWNQRGTLG-HPPKTKTESSPGPVHALAGLKIVQAAIGGWHCL------- 107

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT-- 193
                                          +++  G  Y WG NEYGQ G         
Sbjct: 108 -------------------------------AVDDNGHAYAWGGNEYGQCGEEPERKEDG 136

Query: 194 -------VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG----IGSAVQLDSP 242
                  +  PQR      L +  +A G  HS VL++    ++ +G     G   Q+ +P
Sbjct: 137 TRALRRDIPTPQRCAP--KLKVRQVAAGGTHSVVLTQE-GHVWTWGQPWPPGDIKQISTP 193

Query: 243 KSVH 246
             V 
Sbjct: 194 VRVQ 197



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 13/93 (13%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G WHS AL   GEV+ WG   HG+LG    DK S+ +P +V+ LA   +VQ   G +H 
Sbjct: 259 AGGWHSTALTIQGEVYAWGRGEHGRLGF-GDDKSSRMVPLKVELLAGEDIVQVSCGGTH- 316

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLG 94
                      S+AL   G +F++G   HG+LG
Sbjct: 317 -----------SVALTRDGRMFSYGRGDHGRLG 338


>gi|307110133|gb|EFN58370.1| hypothetical protein CHLNCDRAFT_20698, partial [Chlorella
           variabilis]
          Length = 379

 Score = 99.8 bits (247), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 83/267 (31%), Positives = 120/267 (44%), Gaps = 49/267 (18%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           ++LA+   G V TWG +  G LG     ++ Q  P+RV GL  V + QA           
Sbjct: 43  NTLAIGADGNVITWGWNARGTLG--HGHREPQGKPQRVAGLQGVHIKQA----------- 89

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G WH LAL+D G+ + WGG+ +GQ      DK+    P  VK L  ++V Q  AG  
Sbjct: 90  -AIGGWHVLALDDTGQCWAWGGNEYGQ--CLPRDKRDILAP--VKCLEGIAVKQVAAGGM 144

Query: 126 HCLVLTSSGVVTCTHKENGCGS-----------------DPSQGVQSNLVQDSHTTITSL 168
           H L LT +G +    +  G  S                 D S G   NL         +L
Sbjct: 145 HSLALTETGEIWMWGEPWGDFSMTINRAPRRIDTTGDFVDVSCGAFHNL---------AL 195

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
           N+ GE +TWG N++G +G N + +  T P++V  L  + IA ++ G  HS  +S     +
Sbjct: 196 NAAGECFTWGINDFGMLG-NGTTSYATCPEKVVGLEGVFIADVSAGGWHSMAISAE-GEV 253

Query: 229 YAFGIGSAVQL---DSPKSVHKTPQLI 252
           Y +G G   +L   D   S    PQ +
Sbjct: 254 YVWGRGEYGRLGLGDRTGSSKLRPQKV 280



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 71/268 (26%), Positives = 111/268 (41%), Gaps = 80/268 (29%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WH LAL+D G+ + WGG+ +GQ      DK+    P  VK L  ++V Q  AG  H L
Sbjct: 92  GGWHVLALDDTGQCWAWGGNEYGQ--CLPRDKRDILAP--VKCLEGIAVKQVAAGGMHSL 147

Query: 63  VLTSTTGLW----------------------------------HSLALNDCGEVFTWGGD 88
            LT T  +W                                  H+LALN  GE FTWG +
Sbjct: 148 ALTETGEIWMWGEPWGDFSMTINRAPRRIDTTGDFVDVSCGAFHNLALNAAGECFTWGIN 207

Query: 89  THGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSD 148
             G LG  +      + P++V GL  V +    AG  H + +++                
Sbjct: 208 DFGMLG--NGTTSYATCPEKVVGLEGVFIADVSAGGWHSMAISAE--------------- 250

Query: 149 PSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGI-NNSNTTVTKPQRVESLVNLP 207
                                  GE+Y WG  EYG++G+ + + ++  +PQ+V++L    
Sbjct: 251 -----------------------GEVYVWGRGEYGRLGLGDRTGSSKLRPQKVKTLEGHR 287

Query: 208 IALIACGANHSFVLSKSVSRLYAFGIGS 235
           +   +CG  H+ V++    R + +G G+
Sbjct: 288 VVEGSCGGTHTMVVTDE-GRCFIWGRGA 314



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 12/90 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WHS+A++  GEV+ WG   +G+LGL      S+  P++VK L    VV+   G +H +
Sbjct: 240 GGWHSMAISAEGEVYVWGRGEYGRLGLGDRTGSSKLRPQKVKTLEGHRVVEGSCGGTHTM 299

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQ 92
           V+T            D G  F WG    G+
Sbjct: 300 VVT------------DEGRCFIWGRGAFGR 317


>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2441

 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 75/290 (25%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 1673 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 1730

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +
Sbjct: 1731 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 1776

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G +                                     ++ +G+ +YG++
Sbjct: 1777 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 1799

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+++ L  + I  +ACG   S  L+K    +Y FG    + L   ++ 
Sbjct: 1800 GLGNS-TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 1857

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
             H  PQ I  P +A                 G++++ +  G +H++   +
Sbjct: 1858 NHNRPQQI--PVLA-----------------GVIIEDVAVGAEHTLALAS 1888



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 1626 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 1674

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+TS 
Sbjct: 1675 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 1732

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN +YG++G+ N++  
Sbjct: 1733 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 1754

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P+RV +L    I  +ACG NH+  +S   S ++AFG G   +L    S  K +PQ I
Sbjct: 1755 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKI 1813



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 114/259 (44%), Gaps = 34/259 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + Q   G +H L
Sbjct: 1722 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 1779

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D   V+ +G   +G+LGL ++  KS   P+++  L  + + +   
Sbjct: 1780 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKIDVLCGIGIKKVAC 1826

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN-----------LVQD-----SHTTIT 166
            G    + LT  G V    ++   G    +    N           +++D      HT   
Sbjct: 1827 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT--L 1884

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +    
Sbjct: 1885 ALASNGDVYAWGSNSEGQLGLGHTN-HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 1943

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G+   +QL  P +V
Sbjct: 1944 PPRAPGVSVPLQLGLPDTV 1962


>gi|83767873|dbj|BAE58012.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 848

 Score = 99.8 bits (247), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 26/200 (13%)

Query: 896  PHGGRK---VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTT 952
            P G R+   V  +AFY   L    D+  D+  W S     ST+   C YPF  +  AK  
Sbjct: 392  PQGYRRGQIVPVSAFYN-TLLDYSDLVADFEAWESK----STKFSFCQYPFFLNIWAKIH 446

Query: 953  LLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQY---TT 1009
            +LE D R QME    +  F   L       ++QYL + V RD +V+D++R +++    + 
Sbjct: 447  ILEHDARRQMEVKAREAFFNSILSR---KAISQYLLLRVRRDCLVDDSLRSVSEVVGSSQ 503

Query: 1010 NDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEET 1069
             + KK L++            +F GEE  DAGG+R+E+ +LL++EI DP +G+F   E++
Sbjct: 504  EEIKKGLRI------------EFVGEEGVDAGGLRKEWFLLLVREIFDPHHGLFIYDEDS 551

Query: 1070 RSIWFSEDTFEDQNMYFLIG 1089
            +  +F+   FE    +FL+G
Sbjct: 552  QFCYFNPYCFESSEQFFLVG 571



 Score = 56.6 bits (135), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 18/112 (16%)

Query: 719 HYGITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL--- 774
           H+G+  Y+E ++  +F+   FE     FL+G L GLAIYN TI+++  P   +KK+L   
Sbjct: 541 HHGLFIYDEDSQFCYFNPYCFESSEQFFLVGVLLGLAIYNSTILDINLPPFAFKKLLAAA 600

Query: 775 -----DEPIL--------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                 +P          L DL +  P LAK LQ +LD+ E D+ + F   F
Sbjct: 601 PQTTGPQPATTRSTYKCNLDDLAEYRPPLAKGLQALLDF-EGDVAETFCYDF 651


>gi|393202066|ref|YP_006463908.1| alpha-tubulin suppressor [Solibacillus silvestris StLB046]
 gi|327441397|dbj|BAK17762.1| alpha-tubulin suppressor [Solibacillus silvestris StLB046]
          Length = 797

 Score = 99.8 bits (247), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 119/247 (48%), Gaps = 31/247 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H + L + G V+ WG  ++GQLG   ++  S    ++  G   +++    AG +      
Sbjct: 46  HFIVLKEDGSVWGWGDHSYGQLGANGSNTSSPIPIQKADGNRLLNIKAIAAGSN------ 99

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 H++AL+  GEV+TWG +  GQLG  +A+  S ++P +V G+ S  ++   AG  
Sbjct: 100 ------HTVALDRNGEVWTWGRNNQGQLGYTTANSFS-NLPAKVTGITS-KIIAISAGEY 151

Query: 126 HCLVLTSSGVVTCTHKEN----GCGSDPS---------QGVQSNLVQDSHTTITSLNSPG 172
           H L +  +G V    + +    G   +P+          G+ +    D+H+   +L S G
Sbjct: 152 HTLAVDENGQVWAWGRNDYGQIGTDCNPALAHVQVCGVSGIIAVAAGDNHS--VALKSDG 209

Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
            ++ WG N  GQ+G   +    T P  V  L N  I  I+ GANH+  L +  + +YA+G
Sbjct: 210 TVWAWGRNTVGQLGNGETTDINTNPTAVPGLSN--IVDISAGANHTLALKQDSTSIYAWG 267

Query: 233 IGSAVQL 239
             S+ QL
Sbjct: 268 FNSSGQL 274



 Score = 67.8 bits (164), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 116/268 (43%), Gaps = 69/268 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+LA+++ G+V+ WG + +GQ+G +                 +++ VQ C G S  +
Sbjct: 149 GEYHTLAVDENGQVWAWGRNDYGQIGTDCN--------------PALAHVQVC-GVSGII 193

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQAC 121
            + +  G  HS+AL   G V+ WG +T GQLG  E+ D  +   P  V GL+  ++V   
Sbjct: 194 AVAA--GDNHSVALKSDGTVWAWGRNTVGQLGNGETTDINTN--PTAVPGLS--NIVDIS 247

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
           AG +H L L                            QDS +          +Y WG N 
Sbjct: 248 AGANHTLALK---------------------------QDSTS----------IYAWGFNS 270

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
            GQ+G     + + +P +VE +    +  IA G NHS  + K    ++ +G         
Sbjct: 271 SGQLGDGGLESKL-RPIQVEGMNK--VKTIAAGNNHSIAI-KEDGTVWTWG----RHTSG 322

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGEDS 269
             S   TP  + G  ++S +A+  G DS
Sbjct: 323 TSSNRSTPIQVKG--LSSAIAIGGGGDS 348



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 31/217 (14%)

Query: 72  HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
           H + L + G V+ WG  ++GQLG   ++  S    ++  G   +++    AG +H + L 
Sbjct: 46  HFIVLKEDGSVWGWGDHSYGQLGANGSNTSSPIPIQKADGNRLLNIKAIAAGSNHTVALD 105

Query: 132 SSGVVTCTHKE----------NGCGSDPSQ--GVQSNLVQDS----HTTITSLNSPGELY 175
            +G V    +           N   + P++  G+ S ++  S    HT     N  G+++
Sbjct: 106 RNGEVWTWGRNNQGQLGYTTANSFSNLPAKVTGITSKIIAISAGEYHTLAVDEN--GQVW 163

Query: 176 TWGNNEYGQMGINNSNTTVTKP--QRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
            WG N+YGQ+G      T   P    V+      I  +A G NHS  L KS   ++A+G 
Sbjct: 164 AWGRNDYGQIG------TDCNPALAHVQVCGVSGIIAVAAGDNHSVAL-KSDGTVWAWGR 216

Query: 234 GSAVQLDSPKS--VHKTPQLIHGPWIASPVAMTAGED 268
            +  QL + ++  ++  P  +  P +++ V ++AG +
Sbjct: 217 NTVGQLGNGETTDINTNPTAV--PGLSNIVDISAGAN 251


>gi|304318007|ref|YP_003853152.1| S-layer domain-containing protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779509|gb|ADL70068.1| S-layer domain protein [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 479

 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 132/264 (50%), Gaps = 44/264 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H++AL + G V+ WG +  GQLG       +++IP +VKG++ V  + A        
Sbjct: 234 GAYHTVALKNDGTVWAWGWNDCGQLG--DGTTTNRTIPVQVKGISDVVAIAA-------- 283

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G++H++AL + G V+ WG + H QLG E+  ++  S P +VKG++ V  +   A
Sbjct: 284 ------GMYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDVKAI--AA 335

Query: 123 GYSHCLVLTSSGVVTCTHKE------NGCGSDPSQGVQSNLVQDS--------HTTITSL 168
           G S+ +VL + G V            +G  ++    VQ N + +         HT +  L
Sbjct: 336 GASYTVVLKNDGTVWAWGVNEYGKLGDGTTNNSFTPVQVNGISNVKAIAAGAYHTVV--L 393

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
            + G ++TWG N YG++G N +    + P +V+ + +  +  IA GA H+  L K+   +
Sbjct: 394 KNDGTVWTWGYNHYGELG-NGTTVDSSTPVQVKGISD--VKAIAAGACHTVAL-KNDGTV 449

Query: 229 YAFG------IGSAVQLDSPKSVH 246
           +A+G      +G+   +DS   V 
Sbjct: 450 WAWGCNYYGELGNGTAVDSSTPVQ 473


>gi|355694495|gb|AER99688.1| hect domain and RLD 4 [Mustela putorius furo]
          Length = 181

 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 107/222 (48%), Gaps = 55/222 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL H++ + D G V+T G +  GQLG E + KK    P++V  L + ++V    G +H  
Sbjct: 3   GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 56

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LALND G+V+ WG D+ GQLGL  +++  + +P+ +K L+ + VVQ   
Sbjct: 57  ----------TLALNDKGQVYAWGLDSDGQLGLLGSEECIR-VPRNIKSLSDIQVVQVAC 105

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY H L L+ +                                       E+++WG N+Y
Sbjct: 106 GYYHSLALSKA--------------------------------------SEVFSWGQNKY 127

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
           GQ+G+         PQ ++SL+ +P   +A G  HSFVL+ S
Sbjct: 128 GQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLS 169



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/131 (41%), Positives = 79/131 (60%), Gaps = 14/131 (10%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LALND G+V+ WG D+ GQLGL  +++  + +P+ +K L+ + VVQ   GY       
Sbjct: 56  HTLALNDKGQVYAWGLDSDGQLGLLGSEECIR-VPRNIKSLSDIQVVQVACGY------- 107

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                +HSLAL+   EVF+WG + +GQLGL   D K Q+ P+ +K L  +  +Q  AG +
Sbjct: 108 -----YHSLALSKASEVFSWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIPFMQVAAGGA 161

Query: 126 HCLVLTSSGVV 136
           H  VLT SG +
Sbjct: 162 HSFVLTLSGAI 172



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 13/89 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+   EVF+WG + +GQLGL   D K Q+ P+ +K L  +  +Q  AG +H  
Sbjct: 106 GYYHSLALSKASEVFSWGQNKYGQLGL-GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSF 164

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHG 91
           VLT +            G +F WG +  G
Sbjct: 165 VLTLS------------GAIFGWGRNKFG 181


>gi|328769071|gb|EGF79116.1| hypothetical protein BATDEDRAFT_90109 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 646

 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 109/242 (45%), Gaps = 60/242 (24%)

Query: 902  VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQ 961
            + Y  FY   +    D++ +Y +W S           CNYPF+     K  +L+++  +Q
Sbjct: 218  IPYYEFYNESIEASIDLKEEYPKWKSWEGLS-----FCNYPFVLSTSTKGDILKIESMVQ 272

Query: 962  MEHAMNQTNFY-LFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVND 1020
            M H +    F  +F+   +P     YL++EV RD+++ D + +L   +T+D KK L+++ 
Sbjct: 273  MRHELQDAFFRAMFIGVNSP-----YLQIEVRRDHVIRDALFQLEGKSTHDLKKQLRIS- 326

Query: 1021 TSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFE 1080
                       F GEE  D GGV++EF  L+++++    YGMFK  +E+R  W +     
Sbjct: 327  -----------FTGEEGIDEGGVQKEFFQLVVRDMFSSSYGMFKYNDESRMCWLA----- 370

Query: 1081 DQNMYFLIGKEYVPCTYISKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNY 1140
              NM  L   E                           T E+ N   L+G + GLAIYN 
Sbjct: 371  --NMSDLRDSE---------------------------TLEEYN---LMGRIIGLAIYNG 398

Query: 1141 TV 1142
             V
Sbjct: 399  VV 400



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 12/102 (11%)

Query: 720 YGITEY-EETRSIWFSE-------DTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYK 771
           YG+ +Y +E+R  W +        +T E+ N   L+G + GLAIYN  ++++ FPLALYK
Sbjct: 355 YGMFKYNDESRMCWLANMSDLRDSETLEEYN---LMGRIIGLAIYNGVVLDIHFPLALYK 411

Query: 772 KILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           K+LD    L DL +L P L + L+ +L++ E D+E+V+G TF
Sbjct: 412 KLLDISPDLDDLAELDPDLCRGLKQLLEF-EGDIEEVYGRTF 452


>gi|380011286|ref|XP_003689740.1| PREDICTED: ubiquitin-protein ligase E3A [Apis florea]
          Length = 863

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 138/312 (44%), Gaps = 52/312 (16%)

Query: 788  PTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFER-----LILIFKQCLIYLLQQ 842
            P++ ++LQ+++  +      V G +F   Y +   D          IL +   L   L +
Sbjct: 334  PSILQALQELITVK------VIGGSFTRDYCVQDADTITAPTKVMKILYYASMLAGELDE 387

Query: 843  PGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKV 902
            P +    +G+ T N K        + L+ +  + L   +   G T  + R P       +
Sbjct: 388  PDLNIDDDGESTSNDKSG------RSLSQIPQDPLAKKL---GITALDARKPF------I 432

Query: 903  AYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQM 962
             +T FY   L+   ++  D+  + S  P   +     NY FI     KT  L  D RI+M
Sbjct: 433  PFTDFYNEPLSDAIEMDKDFAYYKSEEPMKFS---FMNYAFILTPATKTLGLYYDNRIRM 489

Query: 963  --EHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIREL---AQYTTNDFKKPLK 1017
              E  M+      FLQT      N YL ++V RD +++D + EL   A    +D KK L 
Sbjct: 490  YSERRMS------FLQTVVGQPTNPYLRLKVRRDRLIDDALVELEMIAVENPSDLKKQL- 542

Query: 1018 VNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSED 1077
                        V+F GE+  D GGV +EF  L+++EI +P YGMF   E+T+  WF+  
Sbjct: 543  -----------VVEFEGEQGVDEGGVSKEFFQLIVEEIFNPDYGMFTTQEDTQMTWFNPT 591

Query: 1078 TFEDQNMYFLIG 1089
            +FE    + LIG
Sbjct: 592  SFESDAHFTLIG 603



 Score = 77.4 bits (189), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 1/99 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T  E+T+  WF+  +FE      LIG + GLAIYN  I+++ F + +Y+K+L    
Sbjct: 574 YGMFTTQEDTQMTWFNPTSFESDAHFTLIGVVLGLAIYNNVILDVRFSMVVYRKLLGRKG 633

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
              DL+D SPTL ++L++++DY   D+ D F  TFR  Y
Sbjct: 634 CFADLEDWSPTLYRTLKELMDYTGDDMPDTFMQTFRVAY 672


>gi|302808359|ref|XP_002985874.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
 gi|300146381|gb|EFJ13051.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
          Length = 394

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 139/314 (44%), Gaps = 58/314 (18%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           + G  +SLA+ + G +FTWG +  G LG    + K++S P +VK LA+V +VQA      
Sbjct: 44  VAGSRNSLAICEDGRLFTWGWNQRGTLG-HPPETKTESTPSQVKALANVKIVQA------ 96

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ------------SIPKR 108
                   G WH LA+++ G  + WGG+ +GQ   E   K+ Q            +IP+R
Sbjct: 97  ------AIGGWHCLAVDEEGRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQR 150

Query: 109 VKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSL 168
                 + V Q  AG +H +VLT  G V    +    G      V   +    + T+ ++
Sbjct: 151 CA--PRLCVRQLTAGGTHSVVLTEEGHVWTWGQPWPPGDIKQISVPVRVQGLENVTMIAV 208

Query: 169 NS--------PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
            +         GE++ WGNNEYGQ+G  ++    + P  V+ L  L +  IA G  HS  
Sbjct: 209 GAFHNLALVQHGEVWAWGNNEYGQLGTGDTQPR-SSPVPVKGLTGLVLVDIAAGGWHSMA 267

Query: 221 LSKSVSRLYAFGIGSAVQL--DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLV 278
           L+     +Y +G G   +L     KS    PQ +H         + AGE           
Sbjct: 268 LTPD-GAVYGWGRGEHGRLGFGDDKSSKMLPQKVH---------LLAGEP---------- 307

Query: 279 VKKIYSGGDHSIVT 292
           V ++  GG HS+  
Sbjct: 308 VVQVSCGGTHSVAA 321



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 136/345 (39%), Gaps = 103/345 (29%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ------------SIPKRVKGLASVS 50
           G WH LA+++ G  + WGG+ +GQ   E   K+ Q            +IP+R      + 
Sbjct: 99  GGWHCLAVDEEGRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCA--PRLC 156

Query: 51  VVQACAGYSHCLVLTSTTGLW----------------------------------HSLAL 76
           V Q  AG +H +VLT    +W                                  H+LAL
Sbjct: 157 VRQLTAGGTHSVVLTEEGHVWTWGQPWPPGDIKQISVPVRVQGLENVTMIAVGAFHNLAL 216

Query: 77  NDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV 136
              GEV+ WG + +GQLG  + D + +S P  VKGL  + +V   AG  H + LT  G V
Sbjct: 217 VQHGEVWAWGNNEYGQLG--TGDTQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAV 274

Query: 137 TCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTK 196
                                                 Y WG  E+G++G  +  ++   
Sbjct: 275 --------------------------------------YGWGRGEHGRLGFGDDKSSKML 296

Query: 197 PQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPW 256
           PQ+V  L   P+  ++CG  HS   + S  R+++FG G   +L    +V        G  
Sbjct: 297 PQKVHLLAGEPVVQVSCGGTHSVAATIS-GRMFSFGRGDHGRLGYSGAV------TTGHP 349

Query: 257 IASPVAM-------TAGEDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
           +  PV++          ED   + S G VVK +  GG H++   +
Sbjct: 350 VEVPVSLHHYSRHNIVSEDE-ANGSTGWVVKLVACGGRHALAVAS 393



 Score = 63.9 bits (154), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 90/230 (39%), Gaps = 69/230 (30%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           V  WG    GQLGL +   K            SV VV A   ++   V++   G  +SLA
Sbjct: 7   VLAWGAGEDGQLGLGNLQDKD-----------SVCVVDALRDHN---VVSVVAGSRNSLA 52

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           + + G +FTWG +  G LG    + K++S P +VK LA+V +VQA  G  HCL       
Sbjct: 53  ICEDGRLFTWGWNQRGTLG-HPPETKTESTPSQVKALANVKIVQAAIGGWHCL------- 104

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNS----- 190
                                          +++  G  Y WG NEYGQ           
Sbjct: 105 -------------------------------AVDEEGRTYAWGGNEYGQCAEEQQTKEQQ 133

Query: 191 --------NTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
                   +  +T PQR      L +  +  G  HS VL++    ++ +G
Sbjct: 134 NKGESKVLHRDITIPQRCAP--RLCVRQLTAGGTHSVVLTEE-GHVWTWG 180


>gi|317144277|ref|XP_001820014.2| ubiquitin-protein ligase (Hul4) [Aspergillus oryzae RIB40]
          Length = 1188

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 26/200 (13%)

Query: 896  PHGGRK---VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTT 952
            P G R+   V  +AFY   L    D+  D+  W S     ST+   C YPF  +  AK  
Sbjct: 732  PQGYRRGQIVPVSAFYN-TLLDYSDLVADFEAWESK----STKFSFCQYPFFLNIWAKIH 786

Query: 953  LLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQY---TT 1009
            +LE D R QME    +  F   L       ++QYL + V RD +V+D++R +++    + 
Sbjct: 787  ILEHDARRQMEVKAREAFFNSILSR---KAISQYLLLRVRRDCLVDDSLRSVSEVVGSSQ 843

Query: 1010 NDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEET 1069
             + KK L++            +F GEE  DAGG+R+E+ +LL++EI DP +G+F   E++
Sbjct: 844  EEIKKGLRI------------EFVGEEGVDAGGLRKEWFLLLVREIFDPHHGLFIYDEDS 891

Query: 1070 RSIWFSEDTFEDQNMYFLIG 1089
            +  +F+   FE    +FL+G
Sbjct: 892  QFCYFNPYCFESSEQFFLVG 911



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 18/112 (16%)

Query: 719 HYGITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL--- 774
           H+G+  Y+E ++  +F+   FE     FL+G L GLAIYN TI+++  P   +KK+L   
Sbjct: 881 HHGLFIYDEDSQFCYFNPYCFESSEQFFLVGVLLGLAIYNSTILDINLPPFAFKKLLAAA 940

Query: 775 -----DEPIL--------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                 +P          L DL +  P LAK LQ +LD+ E D+ + F   F
Sbjct: 941 PQTTGPQPATTRSTYKCNLDDLAEYRPPLAKGLQALLDF-EGDVAETFCYDF 991


>gi|328776205|ref|XP_394656.4| PREDICTED: ubiquitin-protein ligase E3A [Apis mellifera]
          Length = 863

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 138/312 (44%), Gaps = 52/312 (16%)

Query: 788  PTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFER-----LILIFKQCLIYLLQQ 842
            P++ ++LQ+++  +      V G +F   Y +   D          IL +   L   L +
Sbjct: 334  PSILQALQELITVK------VIGGSFTRDYCVQDADTITAPTKVMKILYYASMLAGELDE 387

Query: 843  PGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKV 902
            P +    +G+ T N K        + L+ +  + L   +   G T  + R P       +
Sbjct: 388  PDLNIDDDGESTSNDKSG------RSLSQIPQDPLAKEL---GITALDARKPF------I 432

Query: 903  AYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQM 962
             +T FY   L+   ++  D+  + S  P   +     NY FI     KT  L  D RI+M
Sbjct: 433  PFTDFYNEPLSDAIEMDKDFAYYKSEEPMKFS---FMNYAFILTPATKTLGLYYDNRIRM 489

Query: 963  --EHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIREL---AQYTTNDFKKPLK 1017
              E  M+      FLQT      N YL ++V RD +++D + EL   A    +D KK L 
Sbjct: 490  YSERRMS------FLQTVVGQPTNPYLRLKVRRDRLIDDALVELEMIAVENPSDLKKQL- 542

Query: 1018 VNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSED 1077
                        V+F GE+  D GGV +EF  L+++EI +P YGMF   E+T+  WF+  
Sbjct: 543  -----------VVEFEGEQGVDEGGVSKEFFQLIVEEIFNPDYGMFTTQEDTQMTWFNPT 591

Query: 1078 TFEDQNMYFLIG 1089
            +FE    + LIG
Sbjct: 592  SFESDAHFTLIG 603



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 1/99 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T  E+T+  WF+  +FE      LIG + GLAIYN  I+++ F + +Y+K+L    
Sbjct: 574 YGMFTTQEDTQMTWFNPTSFESDAHFTLIGVVLGLAIYNNVILDVRFSMVVYRKLLGRKG 633

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
              DL+D SPTL ++L++++DY   D+ D F  TFR  Y
Sbjct: 634 CFADLEDWSPTLYRTLKELMDYTGDDMPDTFMQTFRVAY 672


>gi|358372101|dbj|GAA88706.1| ubiquitin-protein ligase [Aspergillus kawachii IFO 4308]
          Length = 1104

 Score = 99.0 bits (245), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 114/231 (49%), Gaps = 25/231 (10%)

Query: 864  QVLQKLNSLNNETLTSSISA--GGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRID 921
            +V+  L + NN  ++       G    S  R+ A   G  +  ++FY   L    D+  D
Sbjct: 622  RVMSLLFTANNANVSRKPDGILGQDASSVARSQASRRGHMIPISSFYN-TLLDYSDLVAD 680

Query: 922  YFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPH 981
            +  W S     +T+   C YPF     AK  +LE D R QME    +     F    +  
Sbjct: 681  FEAWESK----TTKFSFCQYPFFLSIWAKIHILEHDARRQMEVKAREA---FFNSIMSRT 733

Query: 982  TLNQYLEVEVSRDNIVEDTIR---ELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
             ++QYL ++V RD +VED++R   E+   +  + KK L++            +F GEE  
Sbjct: 734  AISQYLVLKVRRDCLVEDSLRGVSEVVGSSQEEIKKGLRI------------EFLGEEGV 781

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            DAGG+R+E+ +LL++E+ DP +G+F   +++R  +F+   FE    +FL+G
Sbjct: 782  DAGGLRKEWFLLLVREVFDPHHGLFIYDDDSRYCYFNPYCFESSEQFFLVG 832



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 13/107 (12%)

Query: 719 HYGITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
           H+G+  Y++ +R  +F+   FE     FL+G L GLAIYN TI+++  P   +KK+L   
Sbjct: 802 HHGLFIYDDDSRYCYFNPYCFESSEQFFLVGVLLGLAIYNSTILDIALPPFAFKKLLAAA 861

Query: 778 IL-----------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L           L DL +L P LAK L+ +LDY E D+ + F   F
Sbjct: 862 PLSSITRPTYKCGLDDLAELRPALAKGLRALLDY-EGDVAETFCYDF 907


>gi|440804151|gb|ELR25029.1| o ubiquitin protein ligase E3A [Acanthamoeba castellanii str. Neff]
          Length = 695

 Score = 99.0 bits (245), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 20/196 (10%)

Query: 881  ISAGGRTVSNIRTPAPHGGR-KVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLC 939
            I AG R +  + T      + K+ Y  FY   +    D++ D+ RWI    + S +   C
Sbjct: 253  IPAGVRVLQLLYTANERITKDKLDYPEFYNDAINESIDLKEDFMRWI----DNSGQFSFC 308

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVED 999
            NY F+FDA  K+ +L+ +  ++  H   +    L    F        L  ++ R+++++D
Sbjct: 309  NYSFVFDAGTKSKILQYESIVEQHHQRQEA---LRRTIFTGMVSAPALVFKIRREHLIQD 365

Query: 1000 TIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPK 1059
            T+  + ++   D KK L+V+            F GEEA D GGV++E   L+L++ILD K
Sbjct: 366  TLSAIQRHDPADLKKELRVH------------FVGEEAIDEGGVQKELFQLILRQILDAK 413

Query: 1060 YGMFKEYEETRSIWFS 1075
            +GMF   EE R+ WF+
Sbjct: 414  FGMFTYSEEARTSWFN 429



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 3/108 (2%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           +G+  Y EE R+ WF+  +  D +   LIG + GLAIYN  I+++ FP  +YKK++    
Sbjct: 414 FGMFTYSEEARTSWFNSVS-TDFDEFKLIGIILGLAIYNGIILDLHFPFVVYKKLVGLEP 472

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFE 826
            L DLKD++P L K L+   +  E  +++ F I++  + ++ + D  E
Sbjct: 473 TLDDLKDVNPGLRKLLEFDGNVEETFMQN-FQISYEAYGMVQTHDLKE 519


>gi|346323568|gb|EGX93166.1| ubiquitin-protein ligase (Hul4), putative [Cordyceps militaris CM01]
          Length = 1161

 Score = 99.0 bits (245), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 103/196 (52%), Gaps = 23/196 (11%)

Query: 897  HGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEM 956
            H G K+  + FY+  +    D+  D+  W + +   S     C YPF+    AKT++L  
Sbjct: 718  HSGHKLPSSDFYV-SMVDYVDLVKDFDTWEAKQGTFS----FCQYPFLLSLWAKTSILGY 772

Query: 957  DQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDT---IRELAQYTTNDFK 1013
            D R QM+    +    L     +  ++ QYL + V R+ +V+D+   + E+    T+D K
Sbjct: 773  DTRRQMQ---TKARAALIDSIMSNKSVQQYLTLTVRRECLVDDSLMAVSEVIGSGTDDIK 829

Query: 1014 KPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIW 1073
            K L++            KFRGEE  D GG+R+E+  L+++++ +P YGMF   E+++  +
Sbjct: 830  KGLRI------------KFRGEEGIDGGGLRKEWFQLVIRDVFNPDYGMFLYDEDSKFCY 877

Query: 1074 FSEDTFEDQNMYFLIG 1089
            F+ ++ E  + YFL+G
Sbjct: 878  FNPNSLESTDQYFLVG 893



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 23/129 (17%)

Query: 720 YGITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDE-- 776
           YG+  Y+E ++  +F+ ++ E  +  FL+G + GLAIYN TI+++P P   +KK+L    
Sbjct: 864 YGMFLYDEDSKFCYFNPNSLESTDQYFLVGVVLGLAIYNSTILDVPLPPFAFKKLLAAAP 923

Query: 777 -----------PIL---LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSD 822
                      P L   L DL +  P+LA+ LQ +L+Y + D+E  F + F     ++ +
Sbjct: 924 GHGMTSLAHAPPHLRYTLDDLAEYRPSLARGLQQLLEY-DGDVESTFALDF-----IIEN 977

Query: 823 DYFERLILI 831
           D F  L  +
Sbjct: 978 DRFGSLTTV 986


>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 407

 Score = 99.0 bits (245), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 164/363 (45%), Gaps = 76/363 (20%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HS+AL   G V TWG + HGQLG        + IP +VK L +V+   A AG     
Sbjct: 66  GSFHSIALKSDGTVLTWGQNMHGQLG--DGTNTDRKIPVQVKDLNNVT---AIAG----- 115

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G WHS+AL   G V+TWG +  GQLG      KS++ P +V  L +++ + A  
Sbjct: 116 ------GAWHSVALTSDGTVWTWGSNWAGQLG--DGTTKSRNKPVQVNNLKNITAI-ASK 166

Query: 123 GYSHCLVLTSSGVVTCTHKE------NGCGSDPSQGVQSNLVQDSHTTITSL-------- 168
           G  H L L S G V    +       +G  +D +  VQ+     S  TI S+        
Sbjct: 167 GL-HNLALKSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTR----SLNTIISIAGGGYHSL 221

Query: 169 --NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
              + G ++TWG N+YGQ+G + + T  T P  V  + +  +++I CG +HS VL K+  
Sbjct: 222 AQKADGTIWTWGLNQYGQLG-DGTITNRTIPVLVNGIKD--VSMIRCGGDHSIVL-KNNG 277

Query: 227 RLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
            ++ +G     QL    + ++          ++PV M   ++          +  I  GG
Sbjct: 278 TIWIWGFNQHGQLGDRSTDNR----------STPVPMGDLKN----------IMTIDGGG 317

Query: 287 DHSIV--------TVTKSSDGVLSDDFRVLNPATQILD---VNFERLKECEREVEQLKSD 335
           DHS++        T   + +G L D    ++ AT I      N   +   E+    LKSD
Sbjct: 318 DHSLILKSDGTVWTWGNNENGQLGDG-TTMSRATPIQASTLSNVTAIASGEQHSIALKSD 376

Query: 336 ETL 338
            T+
Sbjct: 377 GTI 379



 Score = 79.7 bits (195), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 35/207 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLA    G ++TWG + +GQLG       +++IP  V G+  VS+++ C G     
Sbjct: 216 GGYHSLAQKADGTIWTWGLNQYGQLG--DGTITNRTIPVLVNGIKDVSMIR-CGGD---- 268

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+ L + G ++ WG + HGQLG  S D +S  +P  +  L ++  +    
Sbjct: 269 ---------HSIVLKNNGTIWIWGFNQHGQLGDRSTDNRSTPVP--MGDLKNIMTIDG-- 315

Query: 123 GYSHCLVLTSSGVV-TCTHKENGCGSDPSQGVQSNLVQDSH----TTITS-------LNS 170
           G  H L+L S G V T  + ENG   D +   ++  +Q S     T I S       L S
Sbjct: 316 GGDHSLILKSDGTVWTWGNNENGQLGDGTTMSRATPIQASTLSNVTAIASGEQHSIALKS 375

Query: 171 PGELYTWGNNEYGQMG---INNSNTTV 194
            G ++ WG+N  GQ+G   I+N +T V
Sbjct: 376 DGTIWAWGSNRNGQLGDGSISNRSTPV 402



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 109/243 (44%), Gaps = 44/243 (18%)

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           +L  + G +HS+AL   G V TWG + HGQLG        + IP +VK L +V+ +    
Sbjct: 60  ILQVSGGSFHSIALKSDGTVLTWGQNMHGQLG--DGTNTDRKIPVQVKDLNNVTAI--AG 115

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG--SDPSQGVQSNLVQDSH----TTITS-------LN 169
           G  H + LTS G V  T   N  G   D +   ++  VQ ++    T I S       L 
Sbjct: 116 GAWHSVALTSDGTV-WTWGSNWAGQLGDGTTKSRNKPVQVNNLKNITAIASKGLHNLALK 174

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           S G ++TWG N YGQ+G + + T    P +  SL    I  IA G  HS    K+   ++
Sbjct: 175 SDGTVWTWGRNIYGQLG-DGTTTDRNTPVQTRSLN--TIISIAGGGYHSLA-QKADGTIW 230

Query: 230 AFGIGSAVQLDSPKSVHKT-PQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
            +G+    QL      ++T P L++G      V+M                  I  GGDH
Sbjct: 231 TWGLNQYGQLGDGTITNRTIPVLVNG---IKDVSM------------------IRCGGDH 269

Query: 289 SIV 291
           SIV
Sbjct: 270 SIV 272



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 58/143 (40%), Gaps = 42/143 (29%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+ L + G ++ WG + HGQLG  S D +S  +P  +  L ++  +    G  H L+L 
Sbjct: 269 HSIVLKNNGTIWIWGFNQHGQLGDRSTDNRSTPVP--MGDLKNIMTIDG--GGDHSLILK 324

Query: 66  STTGLW--------------------------------------HSLALNDCGEVFTWGG 87
           S   +W                                      HS+AL   G ++ WG 
Sbjct: 325 SDGTVWTWGNNENGQLGDGTTMSRATPIQASTLSNVTAIASGEQHSIALKSDGTIWAWGS 384

Query: 88  DTHGQLGLESADKKSQSIPKRVK 110
           + +GQLG  S   +S  +  ++K
Sbjct: 385 NRNGQLGDGSISNRSTPVLVKIK 407


>gi|340714742|ref|XP_003395884.1| PREDICTED: ubiquitin-protein ligase E3A-like [Bombus terrestris]
          Length = 863

 Score = 99.0 bits (245), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 138/312 (44%), Gaps = 52/312 (16%)

Query: 788  PTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFER-----LILIFKQCLIYLLQQ 842
            P++ ++LQ+++  +      V G +F   Y +   D          IL +   L   L +
Sbjct: 334  PSILQALQELITVK------VIGGSFTRDYCVQDADTITAPTKVMKILYYASMLAGELDE 387

Query: 843  PGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKV 902
            P +    +G+ T N K        + L+ +  + L   +   G T  + R P       +
Sbjct: 388  PDLNIDEDGESTSNDKSG------RSLSQIPQDPLAKEL---GITALDARKPF------I 432

Query: 903  AYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQM 962
             +T FY   L+   ++  D+  + S  P   +     NY FI     KT  L  D RI+M
Sbjct: 433  PFTDFYNEPLSDAIEMDKDFAYYKSEEPMKFS---FMNYAFILTPATKTLGLYYDNRIRM 489

Query: 963  --EHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIREL---AQYTTNDFKKPLK 1017
              E  M+      FLQT      N YL ++V RD +++D + EL   A    +D KK L 
Sbjct: 490  YSERRMS------FLQTVVGQPTNPYLRLKVRRDRLIDDALVELEMVAVENPSDLKKQL- 542

Query: 1018 VNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSED 1077
                        V+F GE+  D GGV +EF  L+++EI +P YGMF   E+T+  WF+  
Sbjct: 543  -----------VVEFEGEQGVDEGGVSKEFFQLIVEEIFNPDYGMFTTQEDTQMTWFNPT 591

Query: 1078 TFEDQNMYFLIG 1089
            +FE    + LIG
Sbjct: 592  SFESDAHFTLIG 603



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 60/96 (62%), Gaps = 1/96 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T  E+T+  WF+  +FE      LIG + GLAIYN  I+++ F + +Y+K+L    
Sbjct: 574 YGMFTTQEDTQMTWFNPTSFESDAHFTLIGVVLGLAIYNNVILDVRFSMVVYRKLLGRKG 633

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
              DL+D SPTL ++L++++DY   D+ + F  TFR
Sbjct: 634 CFADLEDWSPTLYRTLKELIDYTGNDMPETFMQTFR 669


>gi|350398844|ref|XP_003485321.1| PREDICTED: ubiquitin-protein ligase E3A-like [Bombus impatiens]
          Length = 863

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 138/312 (44%), Gaps = 52/312 (16%)

Query: 788  PTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFER-----LILIFKQCLIYLLQQ 842
            P++ ++LQ+++  +      V G +F   Y +   D          IL +   L   L +
Sbjct: 334  PSILQALQELITVK------VIGGSFTRDYCVQDADTITAPTKVMKILYYANMLAGELDE 387

Query: 843  PGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKV 902
            P +    +G+ T N K        + L+ +  + L   +   G T  + R P       +
Sbjct: 388  PDLNIDEDGESTSNDKSG------RSLSQIPQDPLAKEL---GITALDARKPF------I 432

Query: 903  AYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQM 962
             +T FY   L+   ++  D+  + S  P   +     NY FI     KT  L  D RI+M
Sbjct: 433  PFTDFYNEPLSDAIEMDKDFAYYKSEEPMKFS---FMNYAFILTPATKTLGLYYDNRIRM 489

Query: 963  --EHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIREL---AQYTTNDFKKPLK 1017
              E  M+      FLQT      N YL ++V RD +++D + EL   A    +D KK L 
Sbjct: 490  YSERRMS------FLQTVVGQPTNPYLRLKVRRDRLIDDALVELEMVAVENPSDLKKQL- 542

Query: 1018 VNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSED 1077
                        V+F GE+  D GGV +EF  L+++EI +P YGMF   E+T+  WF+  
Sbjct: 543  -----------VVEFEGEQGVDEGGVSKEFFQLIVEEIFNPDYGMFTTQEDTQMTWFNPT 591

Query: 1078 TFEDQNMYFLIG 1089
            +FE    + LIG
Sbjct: 592  SFESDAHFTLIG 603



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 61/99 (61%), Gaps = 1/99 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T  E+T+  WF+  +FE      LIG + GLAIYN  I+++ F + +Y+K+L    
Sbjct: 574 YGMFTTQEDTQMTWFNPTSFESDAHFTLIGVVLGLAIYNNVILDVRFSMVVYRKLLGRKG 633

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
              DL+D SPTL ++L++++DY   D+ + F  TFR  Y
Sbjct: 634 CFADLEDWSPTLYRTLKELIDYTGNDMPETFMQTFRVAY 672


>gi|408399749|gb|EKJ78842.1| hypothetical protein FPSE_00985 [Fusarium pseudograminearum CS3096]
          Length = 1216

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 31/223 (13%)

Query: 870  NSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGR 929
            N  NNET + S           R    H   ++  T+ +   +    D+  D+  W S +
Sbjct: 744  NRKNNETSSPSRE---------RYTGAHAHGQILPTSDFYNSMIDYTDLVADFENWESRK 794

Query: 930  PNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEV 989
                ++   C YPF+    AK  +LE D R QM+          F    +   +NQ+LE+
Sbjct: 795  ----SKFTFCQYPFLLSIWAKNHILEHDARRQMQSKARDA---FFDSIMSRKAINQFLEL 847

Query: 990  EVSRDNIVEDTIRELAQYT---TNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
             V RD +V+D+++ +++     + D KK L++             F GEE  DAGG+R+E
Sbjct: 848  NVRRDCLVDDSLKAVSEVIGSGSEDIKKGLRIT------------FNGEEGVDAGGLRKE 895

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            + +LL++E+ +P +G+F   E+++  +F+ + FE  + +FLIG
Sbjct: 896  WFLLLVREVFNPDHGLFLYDEDSQYCYFNPNAFETSDQFFLIG 938



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 17/104 (16%)

Query: 726  EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL----------- 774
            E+++  +F+ + FE  +  FLIG + GLAIYN TI+++  P   ++K++           
Sbjct: 916  EDSQYCYFNPNAFETSDQFFLIGVVMGLAIYNSTILDVALPPFAFRKLIASAPTHGTGAS 975

Query: 775  --DEPIL---LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
               +P +   L+DL +  P LA+ L+ +L+Y E ++E+ F + F
Sbjct: 976  AHAKPPMRYTLEDLAEYRPRLARGLRQLLEY-EGNVEETFCLDF 1018


>gi|391872686|gb|EIT81787.1| E3 ubiquitin protein ligase [Aspergillus oryzae 3.042]
          Length = 1188

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 103/200 (51%), Gaps = 26/200 (13%)

Query: 896  PHGGRK---VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTT 952
            P G R+   V  +AFY   L    D+  D+  W S     ST+   C YPF     AK  
Sbjct: 732  PQGYRRGQIVPVSAFYN-TLLDYSDLVADFEAWESK----STKFSFCQYPFFLSIWAKIH 786

Query: 953  LLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQY---TT 1009
            +LE D R QME    +  F   L       ++QYL + V RD +V+D++R +++    + 
Sbjct: 787  ILEHDARRQMEVKAREAFFNSILSR---KAISQYLLLRVRRDCLVDDSLRSVSEVVGSSQ 843

Query: 1010 NDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEET 1069
             + KK L++            +F GEE  DAGG+R+E+ +LL++EI DP +G+F   E++
Sbjct: 844  EEIKKGLRI------------EFVGEEGVDAGGLRKEWFLLLVREIFDPHHGLFIYDEDS 891

Query: 1070 RSIWFSEDTFEDQNMYFLIG 1089
            +  +F+   FE    +FL+G
Sbjct: 892  QFCYFNPYCFESSEQFFLVG 911



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 18/112 (16%)

Query: 719 HYGITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL--- 774
           H+G+  Y+E ++  +F+   FE     FL+G L GLAIYN TI+++  P   +KK+L   
Sbjct: 881 HHGLFIYDEDSQFCYFNPYCFESSEQFFLVGVLLGLAIYNSTILDINLPPFAFKKLLAAA 940

Query: 775 -----DEPIL--------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                 +P          L DL +  P LAK L+ +LD+ E D+ + F   F
Sbjct: 941 PQTTGPQPATTRSTYKCNLDDLAEYRPPLAKGLRALLDF-EGDVAETFCYDF 991


>gi|346976475|gb|EGY19927.1| ubiquitin-protein ligase E3A [Verticillium dahliae VdLs.17]
          Length = 1220

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 104/192 (54%), Gaps = 22/192 (11%)

Query: 901  KVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRI 960
            +V  T+ +   +    D+  D+  W + R    ++   C YPF+    AK+ +LE D R 
Sbjct: 770  QVLPTSDFYNSMIDYADLIADFEAWETKR----SKFAFCQYPFLLSIWAKSQILEYDARR 825

Query: 961  QMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTN---DFKKPLK 1017
            QM        F   +   N   + Q+L ++V RD +VED++  +++   +   D KK L+
Sbjct: 826  QMTTKARDAFFDSIMTRKN---VTQHLTLDVRRDCLVEDSLAAVSEVIGSGGEDIKKRLR 882

Query: 1018 VNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSED 1077
            +            +FRGEE  DAGG+R+E+ +LL++E+ +P++G+F   EE++  +F+ +
Sbjct: 883  I------------EFRGEEGYDAGGLRKEWFLLLVREVFNPEHGLFTYDEESQLCYFNPN 930

Query: 1078 TFEDQNMYFLIG 1089
            +FE  + +FL+G
Sbjct: 931  SFETSDQFFLVG 942



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 21/117 (17%)

Query: 713  PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
            P++G+  Y     EE++  +F+ ++FE  +  FL+G + GLAIYN TI+++  P   Y+K
Sbjct: 911  PEHGLFTYD----EESQLCYFNPNSFETSDQFFLVGVVIGLAIYNSTILDVALPPFAYRK 966

Query: 773  IL-------------DEPIL---LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            +L               P++   L+DL +  P LA  L+ +LDY + D+E+ FG+ F
Sbjct: 967  LLAAAPISSIPSSAHPRPVMTYNLEDLAEWRPRLAAGLKQLLDY-DGDVEETFGLDF 1022


>gi|363733282|ref|XP_420476.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Gallus gallus]
          Length = 560

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 163/384 (42%), Gaps = 78/384 (20%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+AL+  G +FTWG +THGQLG+ S D    S P+ VKGL  + + Q  AG +H +V++
Sbjct: 94  HSMALSRGGSLFTWGQNTHGQLGVGSQDLLI-SKPQLVKGLKGIPLAQIAAGGAHSVVVS 152

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            +            G V++WG +  GQLGL   + +    P  V+ L     V    G  
Sbjct: 153 LS------------GAVYSWGKNDFGQLGLGHTEDR--DCPSYVEALEHWKAVFISCGED 198

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           H  VL+ +G+V                                      +T+G    GQ+
Sbjct: 199 HTAVLSKNGLV--------------------------------------FTFGAGGAGQL 220

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
           G +NS     +P+ V  L    ++L+ACG  H+ V   S+ ++Y+FG     QL S +  
Sbjct: 221 G-HNSTRNEFRPRMVAELWGARVSLVACGRQHTLVYVPSLDKVYSFGSYEG-QLGSER-- 276

Query: 246 HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVLSDDF 305
            K  QLI  P I SPV          S +   V++    G ++ +  + K  +    +  
Sbjct: 277 -KANQLIPLP-INSPVDNGKYCQENTSQN---VIETTAEGRENIVDLLFKKRNSYPVNGI 331

Query: 306 RVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSFLQVEN 365
             L       +VN      C    + +K +  L          +F S  C+NGSFL  + 
Sbjct: 332 ATLERK----EVNAWVSNSCSEHWKIIKKNIGL----------IFSSEACINGSFLD-KR 376

Query: 366 DEHFSCNSKKFSFIKLSLINWFMK 389
            +HF   S++ S + ++ +  F K
Sbjct: 377 GKHFK-TSQEISGVDMAEVLSFCK 399


>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
 gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Rattus norvegicus]
 gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Rattus norvegicus]
          Length = 551

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 99/231 (42%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV + A    C 
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVMSIACGQMC- 216

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ D GEV+ WG + +GQLGL S+   +Q  P RV  L  + V +   
Sbjct: 217 ----------SMAVVDTGEVYVWGYNGNGQLGLGSSG--NQPTPCRVAALQGIRVQRVAC 264

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 265 GYAHTLVLTDE--------------------------------------GQIYAWGANSY 286

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 287 GQLGTGNKSNQSYPTPVVVEK--DRIIEIAACHSAHTSAAKSQGGHVYMWG 335



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 115/275 (41%), Gaps = 60/275 (21%)

Query: 8   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHCLVLTS 66
           LA  D GEVFTWG + + QLG  +       +P  +   L++  V++   G  H LVLTS
Sbjct: 113 LATTD-GEVFTWGHNAYSQLG--NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
                        GEVF WG +  GQ+G  S    +Q IP+RV G     VV + A    
Sbjct: 170 D------------GEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVMSIA---- 211

Query: 127 CLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG 186
           C  + S  VV                                   GE+Y WG N  GQ+G
Sbjct: 212 CGQMCSMAVV---------------------------------DTGEVYVWGYNGNGQLG 238

Query: 187 INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH 246
           + +S    T P RV +L  + +  +ACG  H+ VL+    ++YA+G  S  QL +    +
Sbjct: 239 LGSSGNQPT-PCRVAALQGIRVQRVACGYAHTLVLTDE-GQIYAWGANSYGQLGTGNKSN 296

Query: 247 K---TPQLIHGPWIASPVAMTAGEDSLVSHSGGLV 278
           +   TP ++    I    A  +   S     GG V
Sbjct: 297 QSYPTPVVVEKDRIIEIAACHSAHTSAAKSQGGHV 331


>gi|119496853|ref|XP_001265200.1| ubiquitin-protein ligase (Hul4), putative [Neosartorya fischeri NRRL
            181]
 gi|119413362|gb|EAW23303.1| ubiquitin-protein ligase (Hul4), putative [Neosartorya fischeri NRRL
            181]
          Length = 1149

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 23/208 (11%)

Query: 882  SAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNY 941
            S+  R  +N R      G KV  +AFY   L    D+  D+  W S     S     C Y
Sbjct: 688  SSANRAAANRR------GHKVPISAFYN-TLLDYSDLVADFEAWESKMAKFS----FCQY 736

Query: 942  PFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTI 1001
            P+     AK  ++E D R QME    +  F   L       ++QYL ++V RD +V+D++
Sbjct: 737  PYFLSIWAKIHIMEHDARRQMEVKAREAFFNSILSR---KAISQYLVLKVRRDCLVDDSL 793

Query: 1002 RELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYG 1061
            R +++   ++ ++         I    +++F GEE  DAGG+R+E+ +LL++EI DP +G
Sbjct: 794  RSVSEVVGSNQEE---------IKKGLRIEFVGEEGVDAGGLRKEWFLLLVREIFDPHHG 844

Query: 1062 MFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +F   E+++  +F+   FE    +FL+G
Sbjct: 845  LFLYDEDSQFCYFNPYCFESSEQFFLVG 872



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 18/112 (16%)

Query: 719 HYGITEYEETRSI-WFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL--- 774
           H+G+  Y+E     +F+   FE     FL+G L GLAIYN TI+++  P   +KK+L   
Sbjct: 842 HHGLFLYDEDSQFCYFNPYCFESSEQFFLVGVLLGLAIYNSTILDIALPPFAFKKLLAAA 901

Query: 775 -----DEP--------ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                 +P          L DL +  P LAK L+ +L++ + D+ D F   F
Sbjct: 902 PQTSGPQPSSGRSNYRCTLDDLAEYRPALAKGLRALLEF-DGDVADTFCYDF 952


>gi|238486400|ref|XP_002374438.1| ubiquitin-protein ligase (Hul4), putative [Aspergillus flavus
            NRRL3357]
 gi|220699317|gb|EED55656.1| ubiquitin-protein ligase (Hul4), putative [Aspergillus flavus
            NRRL3357]
          Length = 742

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 114/237 (48%), Gaps = 25/237 (10%)

Query: 858  KLSFCLQVLQKLNSLNNETLTSSISA--GGRTVSNIRTPAPHGGRKVAYTAFYMPDLATV 915
            +L    +V+  L + NN  +        G    S  +      G+ V  +AFY   L   
Sbjct: 249  QLRAAARVMSLLFTANNANVARKPDGILGQEAGSAAKPQGYRRGQIVPVSAFYN-TLLDY 307

Query: 916  CDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFL 975
             D+  D+  W S     ST+   C YPF     AK  +LE D R QME    +  F   L
Sbjct: 308  SDLVADFEAWESK----STKFSFCQYPFFLSIWAKIHILEHDARRQMEVKAREAFFNSIL 363

Query: 976  QTFNPHTLNQYLEVEVSRDNIVEDTIRELAQY---TTNDFKKPLKVNDTSPIYLAPQVKF 1032
                   ++QYL + V RD +V+D++R +++    +  + KK L++            +F
Sbjct: 364  SR---KAISQYLLLRVRRDCLVDDSLRSVSEVVGSSQEEIKKGLRI------------EF 408

Query: 1033 RGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             GEE  DAGG+R+E+ +LL++EI DP +G+F   E+++  +F+   FE    +FL+G
Sbjct: 409  VGEEGVDAGGLRKEWFLLLVREIFDPHHGLFIYDEDSQFCYFNPYCFESSEQFFLVG 465



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 18/112 (16%)

Query: 719 HYGITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL--- 774
           H+G+  Y+E ++  +F+   FE     FL+G L GLAIYN TI+++  P   +KK+L   
Sbjct: 435 HHGLFIYDEDSQFCYFNPYCFESSEQFFLVGVLLGLAIYNSTILDINLPPFAFKKLLAAA 494

Query: 775 -----DEPIL--------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                 +P          L DL +  P LAK L+ +LD+ E D+ + F   F
Sbjct: 495 PQTTGPQPATTRSTYKCNLDDLAEYRPPLAKGLRALLDF-EGDVAETFCYDF 545


>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
 gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
          Length = 1345

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 53/240 (22%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
           G +   G  ++G+LG+ ++D            L ++S + A  GY    + TS     HS
Sbjct: 537 GTILACGEGSYGRLGMGNSDD-----------LFTLSPISALQGYVVIQIATSRGSDGHS 585

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
           LAL D GEVF+WG   +G+LG  ++D+  Q  P++++ L    VV    G+ H  V+T  
Sbjct: 586 LALTDSGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALRGEEVVNMACGFKHSAVVTVD 643

Query: 134 GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                 G+L+T+GN +YG++G  NS   
Sbjct: 644 --------------------------------------GKLFTFGNGDYGRLGHGNSANK 665

Query: 194 VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKT-PQLI 252
            T P+RV +L    I  +ACG NH+ VLS   + ++AFG G   +L       KT PQ I
Sbjct: 666 KT-PERVTALEKHAIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAI 724



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 57/228 (25%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL D GEVF+WG   +G+LG  ++D+  Q  P++++ L    VV    G+ H  V+T
Sbjct: 584 HSLALTDSGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALRGEEVVNMACGFKHSAVVT 641

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKGLASVSVVQACAGY 124
                         G++FT+G   +G+LG   SA+KK+   P+RV  L   ++ Q   G 
Sbjct: 642 VD------------GKLFTFGNGDYGRLGHGNSANKKT---PERVTALEKHAIGQVACGL 686

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
           +H LVL++ G                                       ++ +G+ +YG+
Sbjct: 687 NHTLVLSADG-------------------------------------NTVWAFGDGDYGK 709

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           +G+  S T  T PQ ++ L  +    I CG   S VL+    R+++FG
Sbjct: 710 LGL-GSCTAKTSPQAIDVLAGIGCKKICCGTQFSVVLTND-GRVFSFG 755



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 27/191 (14%)

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC-- 138
           + + WGG  HGQL   +   +  ++P   K LAS   V  C      +V  +  ++ C  
Sbjct: 489 DAYLWGGGRHGQL---AESGRGVNVPTVTKSLASAQQV-VCGQNCTFVVQVNGTILACGE 544

Query: 139 -THKENGCGS-------DPSQGVQSNLV--------QDSHTTITSLNSPGELYTWGNNEY 182
            ++   G G+        P   +Q  +V         D H+   +L   GE+++WG+ +Y
Sbjct: 545 GSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHS--LALTDSGEVFSWGDGDY 602

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           G++G  NS+    +P+++E+L    +  +ACG  HS V++    +L+ FG G   +L   
Sbjct: 603 GKLGHGNSDRQ-RRPRQIEALRGEEVVNMACGFKHSAVVTVD-GKLFTFGNGDYGRLGHG 660

Query: 243 KSVH-KTPQLI 252
            S + KTP+ +
Sbjct: 661 NSANKKTPERV 671


>gi|350637978|gb|EHA26334.1| hypothetical protein ASPNIDRAFT_170641 [Aspergillus niger ATCC 1015]
          Length = 1194

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 115/237 (48%), Gaps = 25/237 (10%)

Query: 858  KLSFCLQVLQKLNSLNNETLTSSISA--GGRTVSNIRTPAPHGGRKVAYTAFYMPDLATV 915
            ++    +V+  L + NN  ++       G    S  R  A   G  +  ++FY   L   
Sbjct: 706  QVRAAARVMSLLFTANNANVSRKPDGVLGQDAGSVARNQASRRGHMIPISSFYN-TLLDY 764

Query: 916  CDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFL 975
             D+  D+  W S     +T+   C YPF     AK  +LE D R QME    +  F   +
Sbjct: 765  SDLVADFEAWESK----TTKFSFCQYPFFLSIWAKIHILEHDARRQMEVKAREAFFNSIM 820

Query: 976  QTFNPHTLNQYLEVEVSRDNIVEDTIR---ELAQYTTNDFKKPLKVNDTSPIYLAPQVKF 1032
                   ++QYL ++V RD +VED++R   E+   +  + KK L++            +F
Sbjct: 821  SRT---AISQYLVLKVRRDCLVEDSLRGVSEVVGSSQEEIKKGLRI------------EF 865

Query: 1033 RGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             GEE  DAGG+R+E+ +LL++E+ DP +G+F   +++R  +F+   FE    +FL+G
Sbjct: 866  LGEEGVDAGGLRKEWFLLLVREVFDPHHGLFIYDDDSRYCYFNPYCFESSEQFFLVG 922



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 13/107 (12%)

Query: 719 HYGITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
           H+G+  Y++ +R  +F+   FE     FL+G L GLAIYN TI+++  P   +KK+L   
Sbjct: 892 HHGLFIYDDDSRYCYFNPYCFESSEQFFLVGVLLGLAIYNSTILDIALPPFAFKKLLAAA 951

Query: 778 IL-----------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L           L DL +L P LAK L+ +LDY E D+ + F   F
Sbjct: 952 PLSSITRPMYKCSLDDLAELRPALAKGLRALLDY-EGDVAETFCYDF 997


>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 513

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 119/254 (46%), Gaps = 35/254 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++ L++ G V+TWG    G+LG    D   + +P+ V+ L    +VQA        
Sbjct: 48  GSGHTVVLSEDGAVYTWGRGDDGRLG--HGDNGWKYVPRIVEALEGQRIVQA-------- 97

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGL--ASVSVVQA 120
               T G +H+ A+ D GE++TWGG  +G+LG    ++     P  VK L      V Q 
Sbjct: 98  ----TCGSYHTAAVTDKGELYTWGGGMYGKLG--HGNESGHPTPCMVKHLRDEGARVTQI 151

Query: 121 CAGYSHCLVLTSSG-VVTCTHKENGC----GSDPSQGVQSNLVQDSHTTIT--------- 166
             G  H +VLT  G V T   KENG      +D  Q +   L      T+T         
Sbjct: 152 ACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHT 211

Query: 167 -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L + GE++TWG  ++G++G       +  P+ VE+L+   +  +ACG  HS  +  S 
Sbjct: 212 AALTAAGEIFTWGEGKFGRLGHGMERNQMV-PRMVEALMGKRVGHVACGGFHSAAILDS- 269

Query: 226 SRLYAFGIGSAVQL 239
             LY +G G   Q+
Sbjct: 270 GELYTWGGGEHGQV 283



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 111/251 (44%), Gaps = 43/251 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGL--ASVSVVQACAGYSH 60
           G +H+ A+ D GE++TWGG  +G+LG    ++     P  VK L      V Q   G  H
Sbjct: 100 GSYHTAAVTDKGELYTWGGGMYGKLG--HGNESGHPTPCMVKHLRDEGARVTQIACGSRH 157

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
            +VLT            D G+V+TWG   +G +G  +AD   Q +P+ ++ L + +V Q 
Sbjct: 158 TVVLT------------DLGKVYTWGDKENGVVGHTNADGH-QYLPRMLESLQAKTVTQV 204

Query: 121 CAGYSHCLVLTSSGVVTCTHKEN----GCGSDPSQ--------------------GVQSN 156
            A   H   LT++G +    +      G G + +Q                    G  S 
Sbjct: 205 AACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSA 264

Query: 157 LVQDSHTTIT-SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGA 215
            + DS    T      G++YT+GN ++G++G  +    V+ P  V  LV + +  +A   
Sbjct: 265 AILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVR-KVSVPTLVAGLVKMHVVKVASYN 323

Query: 216 NHSFVLSKSVS 226
            H+  L+ + S
Sbjct: 324 EHTAALAGASS 334



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 89/222 (40%), Gaps = 58/222 (26%)

Query: 13  CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWH 72
            G V++WG    GQLGL   D   Q  P  V  L S  VVQ   G  H +VL+       
Sbjct: 6   AGLVYSWGRGEDGQLGL--GDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSED----- 58

Query: 73  SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 132
                  G V+TWG    G+LG    D   + +P+ V+ L    +VQA  G  H   +T 
Sbjct: 59  -------GAVYTWGRGDDGRLG--HGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVT- 108

Query: 133 SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNT 192
                                                  GELYTWG   YG++G  N + 
Sbjct: 109 -------------------------------------DKGELYTWGGGMYGKLGHGNESG 131

Query: 193 TVTKPQRVESLVN--LPIALIACGANHSFVLSKSVSRLYAFG 232
             T P  V+ L +    +  IACG+ H+ VL+  + ++Y +G
Sbjct: 132 HPT-PCMVKHLRDEGARVTQIACGSRHTVVLT-DLGKVYTWG 171


>gi|297293000|ref|XP_002804182.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Macaca
           mulatta]
          Length = 1058

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 162/362 (44%), Gaps = 85/362 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+   +VF+WG ++HGQLGL   +  SQ+ P+RV+ L  + + Q  AG +   
Sbjct: 219 GHYHSLALSKDSQVFSWGKNSHGQLGL-GKEVPSQASPQRVRSLEGIPLAQVAAGGA--- 274

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS AL+ CG  F WG ++ GQL L       +++P+R+K L+   + +AC 
Sbjct: 275 ---------HSFALSLCGTSFGWGSNSAGQLALS-----GRNVPERIKDLS--YLCRACV 318

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
             S                                       I +L+  G+++T+G+N  
Sbjct: 319 SQS-------------------------------------APILTLD--GKVFTFGDNSS 339

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G + +      PQ VE +  L ++ I CG+ H+     +  ++ +FG G +   D+ 
Sbjct: 340 GQLGYSPTPEK-RGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVISFGHGPS---DTS 394

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTK--SSDGV 300
           K  H  P+ + G +      + + ED LV     + VK I++G   + VT  +  SS   
Sbjct: 395 KPTH--PEALTGNFDIR--CLISAED-LVD----VQVKHIFAGTYANFVTTHQDTSSTSA 445

Query: 301 LSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSF 360
                  ++  +Q +   +  +K    E +  KS+          +  +F SP C+  SF
Sbjct: 446 PGKTLPEISRISQSMAEKWIAVKRRSTECDVAKSE----------IRMIFSSPACLTASF 495

Query: 361 LQ 362
           L+
Sbjct: 496 LK 497



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 45/96 (46%), Positives = 62/96 (64%), Gaps = 1/96 (1%)

Query: 719 HYGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            YG+  Y E  S +WF      ++   FL G LCGL+++N  + N+PFPLALYKK+LD+ 
Sbjct: 770 EYGMFMYPEMGSCMWFPAKPKLEKKRYFLFGMLCGLSLFNLNVANLPFPLALYKKLLDQK 829

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
             L+DLK+LSP L KSLQ++L+    D+ DV  I F
Sbjct: 830 PSLEDLKELSPRLGKSLQEVLNDDADDIGDVLCIRF 865



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 1/88 (1%)

Query: 152 GVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALI 211
           G++   V   H    +L+   ++++WG N +GQ+G+     +   PQRV SL  +P+A +
Sbjct: 210 GIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQV 269

Query: 212 ACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           A G  HSF LS   +  + +G  SA QL
Sbjct: 270 AAGGAHSFALSLCGTS-FGWGSNSAGQL 296



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 20/141 (14%)

Query: 957  DQRIQM---EHAMNQTNFYLF-----LQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYT 1008
            D+R Q+    H M++   Y+      LQ  +    +    + V R  +V+D +R+L+Q  
Sbjct: 672  DRRRQLLRDNHMMSEEKAYMLRHETILQKKDEFPPSPRFILRVRRSRLVKDALRQLSQAE 731

Query: 1009 TNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEE 1068
              DF K L             V+F  E   ++GGV  EF   + +E+  P+YGMF   E 
Sbjct: 732  ATDFCKVL------------VVEFIEEIRPESGGVSSEFFHCMFEEMTKPEYGMFMYPEM 779

Query: 1069 TRSIWFSEDTFEDQNMYFLIG 1089
               +WF      ++  YFL G
Sbjct: 780  GSCMWFPAKPKLEKKRYFLFG 800


>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
           porcellus]
          Length = 551

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 102/245 (41%), Gaps = 56/245 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q+IP+RV G     VV   A    C 
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQAIPRRVTGCLQNKVVVNIACGQMC- 216

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ D GEV+ WG + +GQLGL S+   +Q  P RV  L  + V +   
Sbjct: 217 ----------SMAVVDTGEVYVWGYNGNGQLGLGSS--GNQPTPCRVAALQGIRVQRVAC 264

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 265 GYAHTLVLTDE--------------------------------------GQVYAWGANSY 286

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G      +  
Sbjct: 287 GQLGTGNKSNQSYPTPVVVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVTL 344

Query: 242 PKSVH 246
           P   H
Sbjct: 345 PHLTH 349



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L+   +  AC  Y           
Sbjct: 63  VND--EIFVLGTNCSGCLGL--GDVQSTLEPRRLDSLSDKKI--ACLSY----------- 105

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE+++WG+N YGQ+G    N  + 
Sbjct: 106 ----------GSGPH--------------IVLATTEGEVFSWGHNAYGQLGNGTINHGLV 141

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKT-PQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  + ++  P+ + G
Sbjct: 142 PSHISTNLSNKQVTEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTANQAIPRRVTG 200


>gi|134054872|emb|CAK36885.1| unnamed protein product [Aspergillus niger]
          Length = 1067

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 113/231 (48%), Gaps = 25/231 (10%)

Query: 864  QVLQKLNSLNNETLTSSISA--GGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRID 921
            +V+  L + NN  ++       G    S  R  A   G  +  ++FY   L    D+  D
Sbjct: 585  RVMYLLFTANNANVSRKPDGVLGQDAGSVARNQASRRGHMIPISSFYN-TLLDYSDLVAD 643

Query: 922  YFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPH 981
            +  W S     +T+   C YPF     AK  +LE D R QME    +     F    +  
Sbjct: 644  FEAWESK----TTKFSFCQYPFFLSIWAKIHILEHDARRQMEVKAREA---FFNSIMSRT 696

Query: 982  TLNQYLEVEVSRDNIVEDTIR---ELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
             ++QYL ++V RD +VED++R   E+   +  + KK L++            +F GEE  
Sbjct: 697  AISQYLVLKVRRDCLVEDSLRGVSEVVGSSQEEIKKGLRI------------EFLGEEGV 744

Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            DAGG+R+E+ +LL++E+ DP +G+F   +++R  +F+   FE    +FL+G
Sbjct: 745  DAGGLRKEWFLLLVREVFDPHHGLFIYDDDSRYCYFNPYCFESSEQFFLVG 795



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 13/107 (12%)

Query: 719 HYGITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
           H+G+  Y++ +R  +F+   FE     FL+G L GLAIYN TI+++  P   +KK+L   
Sbjct: 765 HHGLFIYDDDSRYCYFNPYCFESSEQFFLVGVLLGLAIYNSTILDIALPPFAFKKLLAAA 824

Query: 778 IL-----------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L           L DL +L P LAK L+ +LDY E D+ + F   F
Sbjct: 825 PLSSITRPMYKCSLDDLAELRPALAKGLRALLDY-EGDVAETFCYDF 870


>gi|336260349|ref|XP_003344970.1| hypothetical protein SMAC_06747 [Sordaria macrospora k-hell]
 gi|380095043|emb|CCC07545.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 788

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 118/238 (49%), Gaps = 27/238 (11%)

Query: 858  KLSFCLQVLQKLNSLNNETLTSSISAGGRTV---SNIRTPAPHGGRKVAYTAFYMPDLAT 914
            ++    QVL  + + NN T  S  S   RT    ++ R      G+ +A + FY   L  
Sbjct: 294  QIKASAQVLALIFAANN-TNHSQRSLANRTAGQAASTRDRVQMRGQILATSDFYT-TLLD 351

Query: 915  VCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLF 974
              D+  D+  W + +   +     C +PF+    AK  +LE D R QME   ++     F
Sbjct: 352  DSDLVADFETWETKKGKFA----FCQFPFLLSIGAKIQILEYDARRQME---DKARDAFF 404

Query: 975  LQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYT---TNDFKKPLKVNDTSPIYLAPQVK 1031
                    + Q+L + V RD +V+D+++ +++     + D KK LK+N            
Sbjct: 405  NSILTHRVIQQHLVLNVRRDCLVDDSLKAVSEVIGSGSEDIKKGLKIN------------ 452

Query: 1032 FRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            F+GEE  DAGG+R+E+ +LL++E+ +P +GMF   E+++  +F+  + E    YFL+G
Sbjct: 453  FKGEEGIDAGGLRKEWFLLLVREVFNPDHGMFVYDEDSQYCYFNPASLEPSEQYFLVG 510



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 16/103 (15%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDE---PIL--- 779
           E+++  +F+  + E     FL+G + GLAIYN TI+++  P   ++K+L     P L   
Sbjct: 488 EDSQYCYFNPASLEPSEQYFLVGVVFGLAIYNSTILDVALPPFAFRKLLSAAPPPTLATS 547

Query: 780 ---------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                    L DL +  P LA  L+ +L+Y + D+E  F + F
Sbjct: 548 QPRQPMTYSLDDLAEYRPRLASGLRQLLEY-DGDVESTFCLDF 589


>gi|302806118|ref|XP_002984809.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
 gi|300147395|gb|EFJ14059.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
          Length = 391

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 126/270 (46%), Gaps = 32/270 (11%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           + G  +SLA+ + G +FTWG +  G LG    + K++S P +VK LA+V +VQA      
Sbjct: 44  VAGSRNSLAICEDGRLFTWGWNQRGTLG-HPPETKTESTPSQVKALANVKIVQA------ 96

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                   G WH LA+++ G  + WGG+ +GQ   E   K+ Q+  +       +++ Q 
Sbjct: 97  ------AIGGWHCLAVDEEGRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQR 150

Query: 121 C-------AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNS--- 170
           C       AG +H +VLT  G V    +    G      V   +    + T+ ++ +   
Sbjct: 151 CAPRLCVAAGGTHSVVLTEEGHVWTWGQPWPPGDIKQISVPVRVQGLENVTMIAVGAFHN 210

Query: 171 -----PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
                 GE++ WGNNEYGQ+G  ++    + P  V+ L  L +  IA G  HS  L+   
Sbjct: 211 LALVQHGEVWAWGNNEYGQLGTGDTQPR-SSPVPVKGLTGLVLVDIAAGGWHSMALTPD- 268

Query: 226 SRLYAFGIGSAVQL--DSPKSVHKTPQLIH 253
             +Y +G G   +L     KS    PQ +H
Sbjct: 269 GAVYGWGRGEHGRLGFGDDKSSKMLPQKVH 298



 Score = 94.0 bits (232), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 112/278 (40%), Gaps = 82/278 (29%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA------ 56
           G WH LA+++ G  + WGG+ +GQ   E   K+ Q+  +       +++ Q CA      
Sbjct: 99  GGWHCLAVDEEGRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPRLCVA 158

Query: 57  -GYSHCLVLTSTTGLW----------------------------------HSLALNDCGE 81
            G +H +VLT    +W                                  H+LAL   GE
Sbjct: 159 AGGTHSVVLTEEGHVWTWGQPWPPGDIKQISVPVRVQGLENVTMIAVGAFHNLALVQHGE 218

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHK 141
           V+ WG + +GQLG  + D + +S P  VKGL  + +V   AG  H + LT  G V     
Sbjct: 219 VWAWGNNEYGQLG--TGDTQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAV----- 271

Query: 142 ENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVE 201
                                            Y WG  E+G++G  +  ++   PQ+V 
Sbjct: 272 ---------------------------------YGWGRGEHGRLGFGDDKSSKMLPQKVH 298

Query: 202 SLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
            L   P+  ++CG  HS   + S  R+++FG G   +L
Sbjct: 299 LLAGEPVVQVSCGGTHSVAATIS-GRMFSFGRGDHGRL 335



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 90/230 (39%), Gaps = 72/230 (31%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           V  WG    GQLGL +   K            SV VV A   ++   V++   G  +SLA
Sbjct: 7   VLAWGAGEDGQLGLGNLQDKD-----------SVCVVDALRDHN---VVSVVAGSRNSLA 52

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           + + G +FTWG +  G LG    + K++S P +VK LA+V +VQA  G  HCL       
Sbjct: 53  ICEDGRLFTWGWNQRGTLG-HPPETKTESTPSQVKALANVKIVQAAIGGWHCL------- 104

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNS----- 190
                                          +++  G  Y WG NEYGQ           
Sbjct: 105 -------------------------------AVDEEGRTYAWGGNEYGQCAEEQQTKEQQ 133

Query: 191 --------NTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
                   +  +T PQR       P   +A G  HS VL++    ++ +G
Sbjct: 134 NKGESKVLHRDITIPQRC-----APRLCVAAGGTHSVVLTEE-GHVWTWG 177


>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
 gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
          Length = 1187

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS  +   GE+FTWG   +G+LG    D + Q  PK V+ L  V V+    G    
Sbjct: 448 AGGAHSACITSTGELFTWGKGRYGRLG--HGDSEDQMKPKLVEALKGVRVIDVACG---- 501

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                 +G   +L + D   V++WG   +G+LG   +D     IP++V+ L    VV+  
Sbjct: 502 ------SGDAQTLCITDDDSVWSWGDGDYGKLGRGGSD--GCKIPQKVEALIGQGVVKVE 553

Query: 122 AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITS 167
            G    + LT SG V    K +    G GSD            QG     +        +
Sbjct: 554 CGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKNVISIATGSLHCVA 613

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
               GE++TWG+N+ GQ+G + S + + +P+ V +L    I  +ACG+ HS   S S
Sbjct: 614 CTDQGEVFTWGDNDEGQLG-DGSTSAIPRPRLVAALQGKKINRVACGSAHSLAWSTS 669



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 121/285 (42%), Gaps = 68/285 (23%)

Query: 7   SLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAG-------- 57
           +L+    G+++ WG +  GQLG +E A  K   +P     LA++  VQ   G        
Sbjct: 301 TLSWGGSGQIWGWGHNHRGQLGGVEGAKVK---LPTPCDALAALRPVQLIGGEQTLFAVY 357

Query: 58  ----------------------------YSHCLVLTSTTGLWHSLALNDCGEVFTWGGDT 89
                                       + H   +   +G  H LAL+  GEVF+WG   
Sbjct: 358 ATGYGAGGRLGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAE 417

Query: 90  HGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN----GC 145
            G+LG    ++ S   P+ ++ L    VV   AG +H   +TS+G +    K      G 
Sbjct: 418 DGKLG--HGNRNSCDRPRVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGH 475

Query: 146 GSDPSQGVQSNLVQ---------------DSHT-TITSLNSPGELYTWGNNEYGQMGINN 189
           G    Q ++  LV+               D+ T  IT  +S   +++WG+ +YG++G   
Sbjct: 476 GDSEDQ-MKPKLVEALKGVRVIDVACGSGDAQTLCITDDDS---VWSWGDGDYGKLGRGG 531

Query: 190 SNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
           S+     PQ+VE+L+   +  + CG+  S  L+KS   +Y +G G
Sbjct: 532 SDGCKI-PQKVEALIGQGVVKVECGSQFSVALTKSGC-VYTWGKG 574


>gi|317026025|ref|XP_001388777.2| ubiquitin-protein ligase (Hul4) [Aspergillus niger CBS 513.88]
          Length = 1194

 Score = 97.8 bits (242), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 115/237 (48%), Gaps = 25/237 (10%)

Query: 858  KLSFCLQVLQKLNSLNNETLTSSISA--GGRTVSNIRTPAPHGGRKVAYTAFYMPDLATV 915
            ++    +V+  L + NN  ++       G    S  R  A   G  +  ++FY   L   
Sbjct: 706  QVRAAARVMYLLFTANNANVSRKPDGVLGQDAGSVARNQASRRGHMIPISSFYN-TLLDY 764

Query: 916  CDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFL 975
             D+  D+  W S     +T+   C YPF     AK  +LE D R QME    +  F   +
Sbjct: 765  SDLVADFEAWESK----TTKFSFCQYPFFLSIWAKIHILEHDARRQMEVKAREAFFNSIM 820

Query: 976  QTFNPHTLNQYLEVEVSRDNIVEDTIR---ELAQYTTNDFKKPLKVNDTSPIYLAPQVKF 1032
                   ++QYL ++V RD +VED++R   E+   +  + KK L++            +F
Sbjct: 821  SRT---AISQYLVLKVRRDCLVEDSLRGVSEVVGSSQEEIKKGLRI------------EF 865

Query: 1033 RGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             GEE  DAGG+R+E+ +LL++E+ DP +G+F   +++R  +F+   FE    +FL+G
Sbjct: 866  LGEEGVDAGGLRKEWFLLLVREVFDPHHGLFIYDDDSRYCYFNPYCFESSEQFFLVG 922



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 13/107 (12%)

Query: 719 HYGITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
           H+G+  Y++ +R  +F+   FE     FL+G L GLAIYN TI+++  P   +KK+L   
Sbjct: 892 HHGLFIYDDDSRYCYFNPYCFESSEQFFLVGVLLGLAIYNSTILDIALPPFAFKKLLAAA 951

Query: 778 IL-----------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L           L DL +L P LAK L+ +LDY E D+ + F   F
Sbjct: 952 PLSSITRPMYKCSLDDLAELRPALAKGLRALLDY-EGDVAETFCYDF 997


>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
           garnettii]
          Length = 551

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 99/231 (42%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     V+          
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVI---------- 207

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T   G   S+A+ D GEVF WG + +GQLGL S+   +Q  P R+  L  + V +   
Sbjct: 208 -VTIACGQMCSMAVVDTGEVFVWGYNGNGQLGLGSSG--NQPTPCRIAALQGIRVQRVAC 264

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 265 GYAHTLVLTDE--------------------------------------GQVYAWGANSY 286

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 287 GQLGTGNKSNQSYPTPVVVEK--DRVIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 48.5 bits (114), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+++  L+   +  AC  Y           
Sbjct: 63  VND--EIFVLGTNCCGCLGL--GDIQSTIEPRKLDSLSGKKI--ACLSY----------- 105

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P            H  + +  + GE++TWG+N Y Q+G   +N  + 
Sbjct: 106 ----------GSGP------------HVVLAT--TEGEVFTWGHNAYSQLGNGTTNHGLV 141

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  + ++  P+ + G
Sbjct: 142 PCHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG 200


>gi|430812459|emb|CCJ30108.1| unnamed protein product, partial [Pneumocystis jirovecii]
          Length = 841

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 43/205 (20%)

Query: 938  LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIV 997
             C YPF+    AK  ++E D + QME    +     F   F    +  +L + V R+ I+
Sbjct: 294  FCQYPFLLSMGAKINIMEYDAKRQMEVKAREA---FFSSIFQKRHITPHLVLRVRRECII 350

Query: 998  EDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILD 1057
            ED++R+++     D KK L++            +F GE+  D GG+R+E+ +LL +E+ D
Sbjct: 351  EDSLRQISN-NEMDLKKSLRI------------EFVGEDGVDIGGLRKEWFLLLCREVFD 397

Query: 1058 PKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEYEETRSIWFSE 1117
            P YG+                        L  K  +    ++   MF   EET   WF+ 
Sbjct: 398  PLYGII-----------------------LYNKNII----VNILGMFVWNEETNYCWFNP 430

Query: 1118 DTFEDQNMYFLIGTLCGLAIYNYTV 1142
             +FE  + YFL+G + GLAIYN T+
Sbjct: 431  ASFESSDQYFLVGVVLGLAIYNSTI 455



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 3/126 (2%)

Query: 701 DVFPDFPIVAAYPKNGI-NHYGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNY 758
           +VF     +  Y KN I N  G+  + EET   WF+  +FE  +  FL+G + GLAIYN 
Sbjct: 394 EVFDPLYGIILYNKNIIVNILGMFVWNEETNYCWFNPASFESSDQYFLVGVVLGLAIYNS 453

Query: 759 TIINMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYL 818
           TI+++  PLA YKK+LD P  L DLK   P+L K  Q +L + E ++ED F   F   Y 
Sbjct: 454 TILDIHLPLACYKKLLDIPCGLDDLKVFRPSLVKGFQHLLTF-EGNVEDTFCRDFVGEYE 512

Query: 819 LMSDDY 824
              + Y
Sbjct: 513 AFGNVY 518


>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
 gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
          Length = 3971

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 56/248 (22%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    ++Q   G+ H  V++
Sbjct: 3279 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEIIQMACGFKHSAVVS 3336

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            +             G++FT+G   +G+LGL +   K   IP+RV  L    V Q   G +
Sbjct: 3337 AD------------GKLFTFGNGDYGRLGLGNTSNK--KIPERVTALEGQMVGQVGCGLN 3382

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L +++ G                                       ++++G+ +YG++
Sbjct: 3383 HTLAVSADG-------------------------------------NTVWSFGDGDYGKL 3405

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV-QLDSPKS 244
            G+ NS T  + PQRV+ L  + +  + CG   S  L+K   R++ FG    + Q +S   
Sbjct: 3406 GLGNS-TAKSTPQRVDPLCGIGVKKVCCGTQFSVALTKD-GRVFTFGQERLIGQPESRSR 3463

Query: 245  VHKTPQLI 252
             H  PQ +
Sbjct: 3464 NHNRPQQV 3471



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 55/241 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++++ A  G+    ++TS     HS
Sbjct: 3232 GTVQACGEGSYGRLGQGNSDD-----------LHQLTIISALQGFVVTQLVTSCGSDGHS 3280

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    ++Q   G+ H  V+++ 
Sbjct: 3281 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEIIQMACGFKHSAVVSAD 3338

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINN-SNT 192
                                                  G+L+T+GN +YG++G+ N SN 
Sbjct: 3339 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 3360

Query: 193  TVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQL 251
             +  P+RV +L    +  + CG NH+  +S   + +++FG G   +L    S  K TPQ 
Sbjct: 3361 KI--PERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLGLGNSTAKSTPQR 3418

Query: 252  I 252
            +
Sbjct: 3419 V 3419



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 22/217 (10%)

Query: 3    GLWHSLALN-DCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            GL H+LA++ D   V+++G   +G+LGL   +  ++S P+RV  L  + V + C G    
Sbjct: 3380 GLNHTLAVSADGNTVWSFGDGDYGKLGL--GNSTAKSTPQRVDPLCGIGVKKVCCGTQF- 3436

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                       S+AL   G VFT+G +    +G   +  ++ + P++V  L +  V    
Sbjct: 3437 -----------SVALTKDGRVFTFGQER--LIGQPESRSRNHNRPQQVPALEAFFVEDVV 3483

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
             G  H L LTS+G V       G   D   G+     +     +T+L        WG+N 
Sbjct: 3484 VGAEHSLALTSTGEVWAW----GSNGDGQLGIGDTNARREPCLVTALQGKNVRQVWGSNG 3539

Query: 182  YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
             GQ+GI ++N    +P  V  L    +  I+ G NHS
Sbjct: 3540 DGQLGIGDTNAR-REPCLVTDLQGKNVRQISAGRNHS 3575



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 40/179 (22%)

Query: 81   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
            E + WGG  HGQL   +   +S   P      +     Q   G +   V+ ++G V    
Sbjct: 3184 EAYMWGGGRHGQL---AETGRSLLTPTVTPSFSQAQ--QIICGQNCTFVIQANGTV---- 3234

Query: 141  KENGCGSDP----SQGVQSNLVQ---------------------DSHTTITSLNSPGELY 175
                CG        QG   +L Q                     D H+   +L   GE++
Sbjct: 3235 --QACGEGSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHS--MALTESGEVF 3290

Query: 176  TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
            +WG+ +YG++G  NS+    +P+++E+L    I  +ACG  HS V+S    +L+ FG G
Sbjct: 3291 SWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEIIQMACGFKHSAVVSAD-GKLFTFGNG 3347


>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 545

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 107/227 (47%), Gaps = 57/227 (25%)

Query: 5   WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHCLV 63
           +H+ AL++ GEVFT+G    G+LG  S  +++Q + + V  LA   V Q AC G+     
Sbjct: 201 FHTAALSEFGEVFTFGEGKFGRLGHNS--ERNQPVARFVDALAGKRVKQVACGGF----- 253

Query: 64  LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG 123
                   H+ A+ + GEV+TWGG  HGQLG    DK ++++P RV+ L    V+Q   G
Sbjct: 254 --------HTAAVTETGEVYTWGGGEHGQLG--HGDKVNKTVPTRVESLLEKLVLQITCG 303

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
           +SH + LT +                                      GE+YTWGN ++G
Sbjct: 304 WSHTVTLTDT--------------------------------------GEVYTWGNGDHG 325

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
           ++G +N    VT P+ V+ L    +  +A    H+  L   V+ L A
Sbjct: 326 KLG-HNDTAKVTLPKPVDVLDGKRVISVASYNEHTVALVDPVAMLRA 371



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 129/263 (49%), Gaps = 37/263 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++ L + GEV+TWG    G+LG    D   + +P+ V+ L   ++ Q         
Sbjct: 42  GSGHTVVLTEEGEVYTWGRGDDGRLG--HGDNGWKFVPRLVEELRGKNIRQV-------- 91

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
               T G +H+ A+   G+++TWGG  +G+LG    ++   S P  V+ L S+ V Q   
Sbjct: 92  ----TCGSYHTAAVTVSGDLYTWGGGMYGKLG--HGNETGHSTPYLVETLKSMQVRQVAC 145

Query: 123 GYSHCLV-LTSSGVVTCTHKENGC-GSDPSQGVQ-----------SNLVQDS----HTTI 165
           G  H +V L +  V T   KENG  G   ++G Q            ++VQ S    HT  
Sbjct: 146 GSRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPVEELRGKSIVQISACGFHT-- 203

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L+  GE++T+G  ++G++G +NS       + V++L    +  +ACG  H+  ++++ 
Sbjct: 204 AALSEFGEVFTFGEGKFGRLG-HNSERNQPVARFVDALAGKRVKQVACGGFHTAAVTET- 261

Query: 226 SRLYAFGIGSAVQLDSPKSVHKT 248
             +Y +G G   QL     V+KT
Sbjct: 262 GEVYTWGGGEHGQLGHGDKVNKT 284



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 67/128 (52%), Gaps = 16/128 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+ A+ + GEV+TWGG  HGQLG    DK ++++P RV+ L    V+Q   G+SH +
Sbjct: 251 GGFHTAAVTETGEVYTWGGGEHGQLG--HGDKVNKTVPTRVESLLEKLVLQITCGWSHTV 308

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            LT            D GEV+TWG   HG+LG    D    ++PK V  L    V+   +
Sbjct: 309 TLT------------DTGEVYTWGNGDHGKLG--HNDTAKVTLPKPVDVLDGKRVISVAS 354

Query: 123 GYSHCLVL 130
              H + L
Sbjct: 355 YNEHTVAL 362



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 72/156 (46%), Gaps = 21/156 (13%)

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV----- 136
           V++WG    GQLGL   D   Q  P  +  LA   +VQ   G  H +VLT  G V     
Sbjct: 3   VYSWGRGEDGQLGL--GDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGR 60

Query: 137 ----TCTHKENGCGSDP-------SQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                  H +NG    P        + ++       HT   +++  G+LYTWG   YG++
Sbjct: 61  GDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVS--GDLYTWGGGMYGKL 118

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
           G  N  T  + P  VE+L ++ +  +ACG+ H+ VL
Sbjct: 119 GHGN-ETGHSTPYLVETLKSMQVRQVACGSRHTVVL 153


>gi|342874091|gb|EGU76164.1| hypothetical protein FOXB_13336 [Fusarium oxysporum Fo5176]
          Length = 1194

 Score = 97.4 bits (241), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 118/223 (52%), Gaps = 30/223 (13%)

Query: 870  NSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGR 929
            +S  NE  + S SA GR  SN+ +   HG  ++  T+ +   +    D+  D+  W + R
Sbjct: 741  HSRRNEE-SPSGSAEGR--SNVHS---HG--QILPTSDFYNSMIDYTDLVADFENWEARR 792

Query: 930  PNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEV 989
                ++   C YPF+    AK  +LE D R QM+   ++     F    +   +NQ+LE+
Sbjct: 793  ----SKFTFCQYPFLLSIWAKNHILEHDARRQMQ---SKARDAFFDSIMSRKAINQFLEL 845

Query: 990  EVSRDNIVEDTIRELAQYT---TNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRRE 1046
             V RD +V+D+++ +++     + D KK L++             F GEE  DAGG+R+E
Sbjct: 846  TVRRDCLVDDSLKAVSEVIGSGSEDIKKGLRIT------------FSGEEGVDAGGLRKE 893

Query: 1047 FLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            + +LL +E+ +P +G+F   E+++  +F+ + FE  + +FL+G
Sbjct: 894  WFLLLAREVFNPDHGLFLYDEDSQYCYFNPNAFETSDQFFLVG 936



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 58/104 (55%), Gaps = 17/104 (16%)

Query: 726  EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL----------- 774
            E+++  +F+ + FE  +  FL+G + GLAIYN TI+++  P   ++K++           
Sbjct: 914  EDSQYCYFNPNAFETSDQFFLVGVVMGLAIYNSTILDVALPPFAFRKLIASAPTHGTGAS 973

Query: 775  --DEPIL---LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                P +   L+DL +  P LA+ L+ +L+Y E ++ED F + F
Sbjct: 974  AHPRPPMRYTLEDLAEYRPRLARGLRQLLEY-EGNVEDTFCLDF 1016


>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
          Length = 527

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 101/245 (41%), Gaps = 56/245 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV   A    C 
Sbjct: 136 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVMNIACGQMC- 192

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ D GEV+ WG + +GQLGL S+   +Q  P RV  L  + V +   
Sbjct: 193 ----------SMAVVDTGEVYVWGYNGNGQLGLGSSG--NQPTPCRVAALQGIRVQRVAC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 241 GYAHTLVLTDE--------------------------------------GQIYAWGANSY 262

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G      +  
Sbjct: 263 GQLGTGNKSNQSYPTPVVVEK--DRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 320

Query: 242 PKSVH 246
           P   H
Sbjct: 321 PHHTH 325



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 114/275 (41%), Gaps = 60/275 (21%)

Query: 8   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHCLVLTS 66
           LA  D GEVFTWG + + QLG  +       +P  +   L++  V++   G  H LVLTS
Sbjct: 89  LATTD-GEVFTWGHNAYSQLG--NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 145

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
                        GEVF WG +  GQ+G  S    +Q IP+RV G     VV   A    
Sbjct: 146 D------------GEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVMNIA---- 187

Query: 127 CLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG 186
           C  + S  VV                                   GE+Y WG N  GQ+G
Sbjct: 188 CGQMCSMAVV---------------------------------DTGEVYVWGYNGNGQLG 214

Query: 187 INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH 246
           + +S    T P RV +L  + +  +ACG  H+ VL+    ++YA+G  S  QL +    +
Sbjct: 215 LGSSGNQPT-PCRVAALQGIRVQRVACGYAHTLVLTDE-GQIYAWGANSYGQLGTGNKSN 272

Query: 247 K---TPQLIHGPWIASPVAMTAGEDSLVSHSGGLV 278
           +   TP ++    I    A  +   S     GG V
Sbjct: 273 QSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHV 307


>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
 gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
 gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Mus musculus]
 gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
 gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_a [Mus musculus]
 gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
 gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
          Length = 551

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 101/245 (41%), Gaps = 56/245 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV   A    C 
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVMNIACGQMC- 216

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ D GEV+ WG + +GQLGL S+   +Q  P RV  L  + V +   
Sbjct: 217 ----------SMAVVDTGEVYVWGYNGNGQLGLGSSG--NQPTPCRVAALQGIRVQRVAC 264

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 265 GYAHTLVLTDE--------------------------------------GQIYAWGANSY 286

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G      +  
Sbjct: 287 GQLGTGNKSNQSYPTPVVVEK--DRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 344

Query: 242 PKSVH 246
           P   H
Sbjct: 345 PHHTH 349



 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 114/275 (41%), Gaps = 60/275 (21%)

Query: 8   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHCLVLTS 66
           LA  D GEVFTWG + + QLG  +       +P  +   L++  V++   G  H LVLTS
Sbjct: 113 LATTD-GEVFTWGHNAYSQLG--NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
                        GEVF WG +  GQ+G  S    +Q IP+RV G     VV   A    
Sbjct: 170 D------------GEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVMNIA---- 211

Query: 127 CLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG 186
           C  + S  VV                                   GE+Y WG N  GQ+G
Sbjct: 212 CGQMCSMAVV---------------------------------DTGEVYVWGYNGNGQLG 238

Query: 187 INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH 246
           + +S    T P RV +L  + +  +ACG  H+ VL+    ++YA+G  S  QL +    +
Sbjct: 239 LGSSGNQPT-PCRVAALQGIRVQRVACGYAHTLVLTDE-GQIYAWGANSYGQLGTGNKSN 296

Query: 247 K---TPQLIHGPWIASPVAMTAGEDSLVSHSGGLV 278
           +   TP ++    I    A  +   S     GG V
Sbjct: 297 QSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHV 331


>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
            scrofa]
          Length = 4060

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 2332 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 2388

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 2389 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 2437

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 2438 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 2495

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 2496 AVTDAGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2548



 Score = 83.2 bits (204), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 2279 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 2336

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 2337 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 2382

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 2383 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 2442

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ + 
Sbjct: 2443 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA- 2500

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 2501 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 2530



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 36/268 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H LAL+  GEV++WG    G+LG    ++     P+ ++ L  + VV   AG +H 
Sbjct: 3273 SGGKHCLALSSEGEVYSWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 3330

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-A 120
              +T+             G+++TWG   +G+LG   +D + Q  PK V  L    VV  A
Sbjct: 3331 ACVTAA------------GDLYTWGKGRYGRLG--HSDSEDQLKPKLVDALQGHRVVDVA 3376

Query: 121  C-AGYSHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQDSHTTI------------ 165
            C +G +  L LT    V      +    G   S G +  +  DS T +            
Sbjct: 3377 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 3436

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G +YTWG  +Y ++G + S+  V +P++V+ L    +  IA G+ H    ++  
Sbjct: 3437 VALTKSGAVYTWGKGDYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDG 3495

Query: 226  SRLYAFGIGSAVQL-DSPKSVHKTPQLI 252
            S  Y +G     QL D   +  + P+L+
Sbjct: 3496 S--YTWGDNDEGQLGDGTTNAIQRPRLV 3521



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 2236 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 2284

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 2285 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 2342

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 2343 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 2401

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 2402 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 2459

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 2460 FRLGHGSDVHVRKPQVVEG 2478



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2185 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 2235

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 2236 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 2289

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 2290 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 2343

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 2344 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2392



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+    T L  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2163 GNSGSLIRKKATSLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2218

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2219 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 2278

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 2279 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 2337

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 2338 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 2394

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 2395 DEGLVFSWGDGDFGKLGRGG 2414



 Score = 61.6 bits (148), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/258 (22%), Positives = 97/258 (37%), Gaps = 87/258 (33%)

Query: 7    SLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQLG +E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3172 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALAALRPVQLIGGEQTLFAVT 3228

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 3229 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3288

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G         
Sbjct: 3289 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAG--------- 3337

Query: 144  GCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESL 203
                                         +LYTWG   YG++G ++S   + KP+ V++L
Sbjct: 3338 -----------------------------DLYTWGKGRYGRLGHSDSEDQL-KPKLVDAL 3367

Query: 204  VNLPIALIACGANHSFVL 221
                +  +ACG+  +  L
Sbjct: 3368 QGHRVVDVACGSGDAQTL 3385



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 2438 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 2495

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 2496 AVT------------DAGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 2541

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 2542 GSSHSVAWTTVDVAT 2556



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 21/129 (16%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S+AL   G V+TWG   + +LG  S D   +  P++V+GL    V+    G  HC+  T 
Sbjct: 3436 SVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQVQGLQGKKVIAIATGSLHCVCCTE 3493

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGY 124
                            +TWG +  GQLG    D  + +I  P+ V  L    V +   G 
Sbjct: 3494 DGS-------------YTWGDNDEGQLG----DGTTNAIQRPRLVAALQGKKVNRVACGS 3536

Query: 125  SHCLVLTSS 133
            +H L  ++S
Sbjct: 3537 AHTLAWSTS 3545


>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Papio anubis]
          Length = 4123

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 2396 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 2452

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 2453 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 2501

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 2502 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 2559

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 2560 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2612



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 3387 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 3440

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 3441 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 3492

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 3493 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3552

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 3553 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 3608



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 2343 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 2400

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 2401 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 2446

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 2447 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 2506

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 2507 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 2564

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 2565 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 2594



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 2300 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 2348

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 2349 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 2406

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 2407 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 2465

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 2466 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 2523

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 2524 FRLGHGSDVHVRKPQVVEG 2542



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3234 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 3290

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 3291 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3350

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 3351 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 3408

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 3409 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 3468

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 3469 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 3526

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 3527 RRPRQVQGLQGKKVIAIATG 3546



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2249 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 2299

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 2300 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 2353

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 2354 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 2407

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 2408 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2456



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2227 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2282

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2283 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 2342

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 2343 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 2401

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 2402 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 2458

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 2459 DEGLVFSWGDGDFGKLGRGG 2478



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 2502 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 2559

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 2560 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 2605

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 2606 GSSHSVAWTTVDVAT 2620


>gi|322705261|gb|EFY96848.1| ubiquitin-protein ligase (Hul4), putative [Metarhizium anisopliae
            ARSEF 23]
          Length = 1113

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 116/254 (45%), Gaps = 59/254 (23%)

Query: 899  GRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQ 958
            G+ V  T FY   +    D+  D+  W S R   S     C YPF+    AKT +LE D 
Sbjct: 643  GQLVPTTDFYN-SMIDYADLVSDFESWESKRSKFS----FCQYPFLMSIWAKTHILEHDA 697

Query: 959  RIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDT---IRELAQYTTNDFKKP 1015
            + QM+  M   + +L     N   + QYL ++V R+ +VED+   + E+    + D KK 
Sbjct: 698  KRQMQ--MKARDAFLDSIMTN-RNVKQYLSLDVRRECLVEDSLAAVSEVIGSGSEDVKKG 754

Query: 1016 LKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFS 1075
            L++             FRGEE  D GG+R+E+ +LL++E+ +P +G              
Sbjct: 755  LRIT------------FRGEEGIDGGGLRKEWFLLLIREVFNPDHG-------------- 788

Query: 1076 EDTFEDQNMYFLIGKEYVPCTYIS-------KYSMFKEYEETRSIWFSEDTFEDQNMYFL 1128
                           +  P T IS          MF   E+++  +F+  TFE  + +FL
Sbjct: 789  ---------------KVAPTTIISCCLANPMPVGMFLYDEDSQYCYFNPATFETSDQFFL 833

Query: 1129 IGTLCGLAIYNYTV 1142
            +G + GLAIYN T+
Sbjct: 834  VGVVMGLAIYNSTI 847



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 17/104 (16%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL----------- 774
           E+++  +F+  TFE  +  FL+G + GLAIYN TI+++  P   ++K+L           
Sbjct: 813 EDSQYCYFNPATFETSDQFFLVGVVMGLAIYNSTILDVALPPFAFRKLLAAAPAHGLGMS 872

Query: 775 --DEPIL---LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
               P +   L+DL +  P +A+ L+ +LD+ E D+E  F + F
Sbjct: 873 SRPRPSMQYTLEDLAEYRPRVARGLRQLLDF-EGDVESAFSLDF 915


>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
          Length = 434

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 127/265 (47%), Gaps = 39/265 (14%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHCLVL 64
           H+LA+ D GE+F++G + +GQLGL +       +P+ V+ L    V   AC G       
Sbjct: 130 HTLAVTDTGELFSFGRNQNGQLGLGTTSDA--ILPQPVESLRGQEVTSIACGGE------ 181

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
                  HSLA    G+VF WG   +G LG+   + +   +P +V GL  V V     G+
Sbjct: 182 -------HSLAATSAGDVFAWGWGRYGNLGVGPPEDR--HLPSQVHGLEGVKVTSVACGW 232

Query: 125 SHCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNL--VQDSHTTI--------TSLNS 170
            H +    +G V       + + G G    Q V   +  ++DS   +        ++ + 
Sbjct: 233 RHSIAADETGAVYTFGWSKYGQLGHGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADD 292

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
            G+LY+WG N++GQ+GI  SNT    P  V+ L   P+ L++CG  H+F ++++   +++
Sbjct: 293 SGKLYSWGWNKFGQLGI-GSNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTEA-GDVFS 350

Query: 231 FGIGSAVQLDSPKSVHKTPQLIHGP 255
           +G G   QL      H  P+  + P
Sbjct: 351 WGRGVNGQLG-----HNEPKDTNAP 370



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 103/250 (41%), Gaps = 56/250 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL   G   +WG    GQLG   A+++ +  P+ +  L   S    C+G  + + L+
Sbjct: 25  HSLALLSNGIALSWGRGEDGQLGHGDAEERKK--PRAIFHLMQASCSAVCSGAEYSVALS 82

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                          EV++WG    G+LG    D     IP+ ++ LA  ++V+   G +
Sbjct: 83  QPR-----------NEVYSWGWGDFGRLG--HGDCNDVFIPQPIRALAGRNIVKVACGDT 129

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           H L +T +                                      GEL+++G N+ GQ+
Sbjct: 130 HTLAVTDT--------------------------------------GELFSFGRNQNGQL 151

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
           G+  ++  +  PQ VESL    +  IACG  HS   + S   ++A+G G    L   P  
Sbjct: 152 GLGTTSDAIL-PQPVESLRGQEVTSIACGGEHSLA-ATSAGDVFAWGWGRYGNLGVGPPE 209

Query: 245 VHKTPQLIHG 254
               P  +HG
Sbjct: 210 DRHLPSQVHG 219



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 16/134 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+A ++ G V+T+G   +GQLG    D   Q +PK V+ L    +V    G+    
Sbjct: 231 GWRHSIAADETGAVYTFGWSKYGQLG--HGDCIDQLVPKAVESLKDSRIVLIAGGWR--- 285

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    H+ A +D G++++WG +  GQLG+ S    +  +P  V+GL +  V     
Sbjct: 286 ---------HTSAADDSGKLYSWGWNKFGQLGIGSNTDSNAPVP--VQGLNTSPVKLLSC 334

Query: 123 GYSHCLVLTSSGVV 136
           G+ H   +T +G V
Sbjct: 335 GWRHTFAVTEAGDV 348



 Score = 50.8 bits (120), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 17/118 (14%)

Query: 1   MTGLW-HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 59
           + G W H+ A +D G++++WG +  GQLG+ S    +  +P  V+GL +  V     G+ 
Sbjct: 280 IAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSNAPVP--VQGLNTSPVKLLSCGWR 337

Query: 60  HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV 117
                       H+ A+ + G+VF+WG   +GQLG    + K  + P R+  L+  S+
Sbjct: 338 ------------HTFAVTEAGDVFSWGRGVNGQLGHN--EPKDTNAPVRLAELSMGSI 381



 Score = 41.2 bits (95), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 35/198 (17%)

Query: 112 LASVSVVQACAGYSHCLVLTSSGV-VTCTHKENG-CGSDPSQGVQS-----NLVQDSHTT 164
           ++ + V     G SH L L S+G+ ++    E+G  G   ++  +      +L+Q S + 
Sbjct: 11  VSDLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSA 70

Query: 165 ITS-------LNSP-GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN 216
           + S       L+ P  E+Y+WG  ++G++G  + N  V  PQ + +L    I  +ACG  
Sbjct: 71  VCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCN-DVFIPQPIRALAGRNIVKVACGDT 129

Query: 217 HSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGG 276
           H+  ++ +   L++FG     QL     +  T   I    +  PV    G++        
Sbjct: 130 HTLAVTDT-GELFSFGRNQNGQL----GLGTTSDAI----LPQPVESLRGQE-------- 172

Query: 277 LVVKKIYSGGDHSIVTVT 294
             V  I  GG+HS+   +
Sbjct: 173 --VTSIACGGEHSLAATS 188


>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
            [Polysphondylium pallidum PN500]
          Length = 1800

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 135/272 (49%), Gaps = 39/272 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHC 61
            G  H   ++  GE+FTWG ++ GQLG      K QS P+RV+   S  ++  +C G    
Sbjct: 1040 GWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGGE--- 1096

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      HS+A++   ++++WG   +GQLG        Q++PK+++       V A 
Sbjct: 1097 ----------HSVAVDQSFQIYSWGSSRYGQLG--HGVLTPQNLPKKIEDFTGGQKVLAI 1144

Query: 122  A-GYSHCLVLTSSGVVTC----THKENGCGSDPSQGV-----QSNLVQDSHTTITSLNS- 170
            A GY+H +VL  SG +         + G G+  ++ V      S +V      IT++ + 
Sbjct: 1145 ATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAG 1204

Query: 171  ---------PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
                      G++Y+WG N  GQ+G  N   ++ +P++++ L   PI  I+CG  H+  +
Sbjct: 1205 HSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSL-RPKQIDELKGKPIIKISCGHFHTVAI 1263

Query: 222  SKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
            S+ ++ +Y +G G  + L +  + ++ +P++I
Sbjct: 1264 SE-LNSVYCWGQGEHMCLGNGSNKNELSPKMI 1294



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 60/228 (26%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-----GLASVSVVQACA 56
            TG  H++ L   G++FT+G +  GQLGL   + K++++P R++     G+    +    A
Sbjct: 1146 TGYAHTMVLKKSGDLFTFGWNDSGQLGL--GNFKNRAVPMRIETSEIVGIHGERITAIAA 1203

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G+SH ++              D G++++WG ++ GQLG  + +K  +  PK++  L    
Sbjct: 1204 GHSHSIMCL------------DNGDIYSWGANSKGQLGHGNIEKSLR--PKQIDELKGKP 1249

Query: 117  VVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYT 176
            +++   G+ H +                                    I+ LNS   +Y 
Sbjct: 1250 IIKISCGHFHTVA-----------------------------------ISELNS---VYC 1271

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
            WG  E+  +G N SN     P+ +E  +N  I  + CG  H+  ++ +
Sbjct: 1272 WGQGEHMCLG-NGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAA 1318


>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Mus musculus]
 gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Mus musculus]
          Length = 560

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 101/245 (41%), Gaps = 56/245 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV   A    C 
Sbjct: 169 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVMNIACGQMC- 225

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ D GEV+ WG + +GQLGL S+   +Q  P RV  L  + V +   
Sbjct: 226 ----------SMAVVDTGEVYVWGYNGNGQLGLGSSG--NQPTPCRVAALQGIRVQRVAC 273

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 274 GYAHTLVLTDE--------------------------------------GQIYAWGANSY 295

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G      +  
Sbjct: 296 GQLGTGNKSNQSYPTPVVVEK--DRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 353

Query: 242 PKSVH 246
           P   H
Sbjct: 354 PHHTH 358



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 114/275 (41%), Gaps = 60/275 (21%)

Query: 8   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHCLVLTS 66
           LA  D GEVFTWG + + QLG  +       +P  +   L++  V++   G  H LVLTS
Sbjct: 122 LATTD-GEVFTWGHNAYSQLG--NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 178

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
                        GEVF WG +  GQ+G  S    +Q IP+RV G     VV   A    
Sbjct: 179 D------------GEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVMNIA---- 220

Query: 127 CLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG 186
           C  + S  VV                                   GE+Y WG N  GQ+G
Sbjct: 221 CGQMCSMAVV---------------------------------DTGEVYVWGYNGNGQLG 247

Query: 187 INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH 246
           + +S    T P RV +L  + +  +ACG  H+ VL+    ++YA+G  S  QL +    +
Sbjct: 248 LGSSGNQPT-PCRVAALQGIRVQRVACGYAHTLVLTDE-GQIYAWGANSYGQLGTGNKSN 305

Query: 247 K---TPQLIHGPWIASPVAMTAGEDSLVSHSGGLV 278
           +   TP ++    I    A  +   S     GG V
Sbjct: 306 QSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHV 340


>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 743

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 124/252 (49%), Gaps = 39/252 (15%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            GL+HSLAL   G V++WG +  G+LG    +  + S+P RVKGL+ V  + A       
Sbjct: 199 AGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISA------- 251

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS-IPKRVKGLASVSVVQA 120
                  G +HS+ALN  G V+ WGG       +E   K   S IP R++ L    VV  
Sbjct: 252 -------GGFHSIALNKDGAVWIWGGGI-----IEKNGKIDNSYIPVRIRWLN--KVVAI 297

Query: 121 CAGYSHCLVLTSSGVV-TCTHKENGC-GSD-------PSQ--GVQSNLVQDSHTTITS-- 167
            AGY H + L   G V    H   G  GS+       P Q  G++ N+V  +   + S  
Sbjct: 298 AAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLPVQVKGLK-NVVAVAAGRLHSVA 356

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G ++ WGNN +GQ+G  N++ ++  P +V+ L N  +  IA G +H+  + +    
Sbjct: 357 LTKNGTIWAWGNNAFGQLGRENNSFSLNLPYKVKWLDN--VVAIAAGGSHTLAIKRD-GT 413

Query: 228 LYAFGIGSAVQL 239
           ++++G  +  QL
Sbjct: 414 VWSWGANNKGQL 425



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 128/276 (46%), Gaps = 43/276 (15%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LA+ D G V+ WG +  GQLG  +   K   IP RVKGL  V  V A           
Sbjct: 53  HTLAIKDDGTVWAWGYNGFGQLG--NGTYKDSCIPVRVKGLKDVVAVSA----------- 99

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G +HSLAL   G V+ WG   +GQ   +S   +  + P +VK L   ++V   AG+ 
Sbjct: 100 ---GTFHSLALKKDGSVWIWGHTNYGQ--RKSDVYRDFTTPVKVKELK--NIVAIAAGWD 152

Query: 126 HCLVLTSSGVVTC----THKENGCGS-DPS------QGVQSNLVQDS---HTTITSLNSP 171
             L + S G V       H E G GS  PS      +G++  +   +   H+   +L   
Sbjct: 153 FSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGLKDVVAVSAGLYHS--LALKRD 210

Query: 172 GELYTWGNNEYGQMGIN-NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
           G +++WG NE G++G     + TV+ P RV+ L +  +  I+ G  HS  L+K    ++ 
Sbjct: 211 GTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSD--VIAISAGGFHSIALNKD-GAVWI 267

Query: 231 FGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAG 266
           +G G  ++ +        P  I   W+   VA+ AG
Sbjct: 268 WG-GGIIEKNGKIDNSYIPVRIR--WLNKVVAIAAG 300



 Score = 70.5 bits (171), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 102/234 (43%), Gaps = 67/234 (28%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADK--KSQSIPKRVKGLASVSVVQACAGYS 59
            G +HSLA+   G V++WG DT+    L++ +K       P ++KGL+ V  V A     
Sbjct: 552 AGYFHSLAVRTDGTVWSWG-DTN----LDNKEKYLNFSEKPVKIKGLSGVVKVAA----- 601

Query: 60  HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ 119
                    G +HSLAL   G V++WG + +GQLG  +  +++  +P RVKGL   +VV 
Sbjct: 602 ---------GKYHSLALKKDGTVWSWGYNAYGQLG--NGTRETSFVPVRVKGLN--NVVA 648

Query: 120 ACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGN 179
             AG  H + L   G V                                      + WG+
Sbjct: 649 IAAGDYHSMALKKDGTV--------------------------------------WVWGS 670

Query: 180 NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
           N  GQ+G  N   + T P +VE L N  +  IA G  HS  L K    ++ +GI
Sbjct: 671 NIRGQLGRRNIEFS-TVPLKVEKLDN--VVAIAAGDTHSVALKKD-GTVWVWGI 720



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 22/155 (14%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G +HSLAL   G V++WG + +GQLG  +  +++  +P RVKGL +V  + A       
Sbjct: 601 AGKYHSLALKKDGTVWSWGYNAYGQLG--NGTRETSFVPVRVKGLNNVVAIAA------- 651

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  G +HS+AL   G V+ WG +  GQLG  + +    ++P +V+ L   +VV   
Sbjct: 652 -------GDYHSMALKKDGTVWVWGSNIRGQLGRRNIE--FSTVPLKVEKLD--NVVAIA 700

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN 156
           AG +H + L   G V     E  C  D S+ + S+
Sbjct: 701 AGDTHSVALKKDGTVWVWGIE--CDRDLSKEILSS 733



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 113/240 (47%), Gaps = 35/240 (14%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+AL   G ++ WG +  GQLG E+ +  S ++P +VK L +V  V   AG SH     
Sbjct: 353 HSVALTKNGTIWAWGNNAFGQLGREN-NSFSLNLPYKVKWLDNV--VAIAAGGSH----- 404

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  +LA+   G V++WG +  GQLG  +   KS  IP  VKGL    +V+  AG  
Sbjct: 405 -------TLAIKRDGTVWSWGANNKGQLG--NGTYKSSYIPTCVKGLNKAVLVE--AGSQ 453

Query: 126 HCLVLTSSGVV-TCTHKENGCGSDPSQGVQSNL------------VQDSHTTITSLNSPG 172
           H L +   G V      E+      ++ + S L            +      I  L   G
Sbjct: 454 HSLAVDKDGTVWVWGFIESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYILVLRKDG 513

Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
            ++  GN+ Y +   ++S ++VTK  R++++ N  +  IA G  HS  + ++   ++++G
Sbjct: 514 NIWGCGNDFYFRKFTDSSVSSVTKLIRLDNIKN--VRSIAAGYFHSLAV-RTDGTVWSWG 570



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 45/248 (18%)

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V++S  G  H+LA+ D G V+ WG +  GQLG  +   K   IP RVKGL    VV   A
Sbjct: 44  VISSGAGSLHTLAIKDDGTVWAWGYNGFGQLG--NGTYKDSCIPVRVKGLK--DVVAVSA 99

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTIT---------------- 166
           G  H L L   G V         G       +S++ +D  T +                 
Sbjct: 100 GTFHSLALKKDGSVWI------WGHTNYGQRKSDVYRDFTTPVKVKELKNIVAIAAGWDF 153

Query: 167 --SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
             ++ S G ++ WG N +G++GI +   +   P +V+ L +  +  ++ G  HS  L + 
Sbjct: 154 SLAVGSDGSVWAWGINNHGELGIGSLKPSAV-PVKVKGLKD--VVAVSAGLYHSLALKRD 210

Query: 225 VSRLYAFGIGSAVQLDSPKSVHKT---PQLIHGPWIASPVAMTAG--------EDSLVSH 273
              ++++G     +L +  +   T   P  + G  ++  +A++AG        +D  V  
Sbjct: 211 -GTVWSWGYNEDGELGNRPTEDYTVSVPVRVKG--LSDVIAISAGGFHSIALNKDGAVWI 267

Query: 274 SGGLVVKK 281
            GG +++K
Sbjct: 268 WGGGIIEK 275



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 126/291 (43%), Gaps = 70/291 (24%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LA+   G V++WG +  GQLG  +   KS  IP  VKGL    +V+A           
Sbjct: 404 HTLAIKRDGTVWSWGANNKGQLG--NGTYKSSYIPTCVKGLNKAVLVEA----------- 450

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLES--ADKKSQSI----PKRVKGLASVSVVQ 119
              G  HSLA++  G V+ WG        +ES  ++K ++ I    P ++  L  ++  +
Sbjct: 451 ---GSQHSLAVDKDGTVWVWG-------FIESVWSEKNTKDILSPLPIKIGKLNDIT--E 498

Query: 120 ACAGYSHCLVLTSSGVVTCTHKENGCG--------SDPSQGVQSNLVQ-DSHTTITSL-- 168
              G  + LVL   G +       GCG        +D S    + L++ D+   + S+  
Sbjct: 499 IAGGLDYILVLRKDGNIW------GCGNDFYFRKFTDSSVSSVTKLIRLDNIKNVRSIAA 552

Query: 169 --------NSPGELYTWGNNEYGQMGINNSNTTVT---KPQRVESLVNLPIALIACGANH 217
                    + G +++WG+       ++N    +    KP +++ L    +  +A G  H
Sbjct: 553 GYFHSLAVRTDGTVWSWGDTN-----LDNKEKYLNFSEKPVKIKGLSG--VVKVAAGKYH 605

Query: 218 SFVLSKSVSRLYAFGIGSAVQL-DSPKSVHKTPQLIHGPWIASPVAMTAGE 267
           S  L K    ++++G  +  QL +  +     P  + G  + + VA+ AG+
Sbjct: 606 SLALKKD-GTVWSWGYNAYGQLGNGTRETSFVPVRVKG--LNNVVAIAAGD 653



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 67/163 (41%), Gaps = 50/163 (30%)

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADK--KSQSIPKRVKGLASVSVVQA 120
           V +   G +HSLA+   G V++WG DT+    L++ +K       P ++KGL+ V  V+ 
Sbjct: 547 VRSIAAGYFHSLAVRTDGTVWSWG-DTN----LDNKEKYLNFSEKPVKIKGLSGV--VKV 599

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AG  H L L   G V                                      ++WG N
Sbjct: 600 AAGKYHSLALKKDGTV--------------------------------------WSWGYN 621

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            YGQ+G N +  T   P RV+ L N  +  IA G  HS  L K
Sbjct: 622 AYGQLG-NGTRETSFVPVRVKGLNN--VVAIAAGDYHSMALKK 661


>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 1413

 Score = 97.1 bits (240), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 131/279 (46%), Gaps = 43/279 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+L L   G V+TWG + +GQLG ES   +S   P +V GL  V  +          
Sbjct: 151 GAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRST--PVQVSGLTDVIAIAG-------- 200

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G +H++AL   G V+ WG +  GQLG  S   +S   P +V GL    V+    
Sbjct: 201 ------GAYHTIALKSDGTVWAWGNNEGGQLGDGSTTDRST--PVQVSGL--TDVIAIAG 250

Query: 123 GYSHCLVLTSSGVV-TCTHKENGCGSDPSQ---------GVQSNLVQ----DSHTTITSL 168
           GY+H + L S G V      E G   D S          G  S+++     ++HT   +L
Sbjct: 251 GYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSDVIAIAGGNAHT--IAL 308

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
            S G ++ WG+NE GQ+G + S T  + P +V  L +  +  IA G +H+ VL +S   +
Sbjct: 309 KSDGTVWAWGDNEGGQLG-DGSTTNRSTPVKVSGLAD--VIAIAGGYSHTIVL-RSDGTV 364

Query: 229 YAFGIGSAVQL-DSPKSVHKTPQLIHGPWIASPVAMTAG 266
           + +G     QL D   +   TP  + G  +A  +A+  G
Sbjct: 365 WTWGHNEGGQLGDGSTTNRSTPVQVSG--LADVIAIAGG 401



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 106/223 (47%), Gaps = 36/223 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G++H++AL   G V+TWG +  GQLG       ++S P +V GL  V  +          
Sbjct: 649 GVYHTIALKSDGTVWTWGWNNSGQLG--DGTTINRSTPVQVIGLTDVIAIAG-------- 698

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G +H++AL   G V+TWG + +GQLG       ++S P +VKGLA   ++    
Sbjct: 699 ------GDYHTIALKSDGTVWTWGFNYYGQLG--GGATTNRSTPVQVKGLA--DIIAIAG 748

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG--SDPSQGVQSNLVQDSHTT-----------ITSLN 169
           GY H + L S G V      NG G   D S       VQ S  T             +L 
Sbjct: 749 GYVHSIALKSDGTV-WAWGYNGYGQLGDGSTTDHLTPVQVSGLTDIIAIAGGYIHTIALK 807

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIA 212
           S G ++ WG+NE GQ+G + + T  + P +V  L ++ IA+ A
Sbjct: 808 SDGTVWAWGHNEGGQLG-DGTTTNSSTPVQVSGLTDV-IAVTA 848



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 127/279 (45%), Gaps = 41/279 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G +H+L L   G V+  G + +GQLG       ++S P +V GL  V  +          
Sbjct: 1047 GAYHTLTLKPDGTVWACGANWNGQLG--DGTTINRSTPVQVSGLTDVIAIAG-------- 1096

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                  G +H++AL     V+ WG +++GQLG       ++SIP  V  L   +++    
Sbjct: 1097 ------GDYHTIALKSDNTVWAWGSNSYGQLG--DGTITNRSIPTPVTYL--TNIIAIAG 1146

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG--SDPSQGVQSNLVQDSHTT-----------ITSLN 169
            GY H + L S G V      NG G   D S   +S  VQ S  T             +L 
Sbjct: 1147 GYVHTIALKSDGTV-WAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGEYVHTVALK 1205

Query: 170  SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
            S G ++ WG N YGQ+G + S T  + P +V  L +  +  IA G  H+  L KS   ++
Sbjct: 1206 SDGTVWAWGYNGYGQLG-DGSTTNRSTPVQVSGLTD--VIAIAGGYVHTIAL-KSDGTVW 1261

Query: 230  AFGIGSAVQLDSPKSVHK-TPQLIHGPWIASPVAMTAGE 267
             +G  ++ QL    ++++ TP  + G  +   +A+  G+
Sbjct: 1262 TWGWNNSGQLGDGTTINRLTPVQVSG--LTDAIAIAGGD 1298



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 64/131 (48%), Gaps = 20/131 (15%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H++AL   G V+ WG +  GQLG       + S P +V GL  V  V A           
Sbjct: 802 HTIALKSDGTVWAWGHNEGGQLG--DGTTTNSSTPVQVSGLTDVIAVTAR---------- 849

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
               L+H++AL   G V+TWG + +GQLG  S  ++  S+P +V GL    V+    GY 
Sbjct: 850 ----LYHTIALKSDGTVWTWGRNIYGQLGDGSTTER--SLPVQVIGL--TDVIAIAGGYY 901

Query: 126 HCLVLTSSGVV 136
           H + L S G V
Sbjct: 902 HTIALKSDGAV 912



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 101/271 (37%), Gaps = 85/271 (31%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL- 64
           H++AL   G V+ WG +  GQLG  S   +S   P +V GLA V  +    GYSH +VL 
Sbjct: 304 HTIALKSDGTVWAWGDNEGGQLGDGSTTNRST--PVKVSGLADV--IAIAGGYSHTIVLR 359

Query: 65  ------------------TSTT-------------------GLWHSLALNDCGEVFTWGG 87
                              STT                   G++H++A+   G ++ WG 
Sbjct: 360 SDGTVWTWGHNEGGQLGDGSTTNRSTPVQVSGLADVIAIAGGVYHTIAVKSDGTMWAWGY 419

Query: 88  DTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGS 147
           + +GQLG       + S P +V GL    V+    GY H + + S G V           
Sbjct: 420 NWYGQLG--DGTTINSSTPVQVNGL--TDVIAIAGGYYHTIAMKSDGAV----------- 464

Query: 148 DPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQR-VESLVNL 206
                                      +TWG N YGQ+G  +     T  QR +  + ++
Sbjct: 465 ---------------------------WTWGFNYYGQLGDGSITNRSTPAQRSLSGMKSV 497

Query: 207 PIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
               +  G+     LS ++   +  G G A 
Sbjct: 498 ATPTVTTGSATCVSLSSALLNGWVNGNGVAT 528



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 109/265 (41%), Gaps = 68/265 (25%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            H++AL   G V+ WG + +GQLG  S   +S   P +V GL    V+    GY H     
Sbjct: 1200 HTVALKSDGTVWAWGYNGYGQLGDGSTTNRST--PVQVSGL--TDVIAIAGGYVH----- 1250

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                   ++AL   G V+TWG +  GQLG       ++  P +V GL     +    G  
Sbjct: 1251 -------TIALKSDGTVWTWGWNNSGQLG--DGTTINRLTPVQVSGL--TDAIAIAGGDY 1299

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H + L S   V                                      + WG+N YGQ+
Sbjct: 1300 HTIALKSDNTV--------------------------------------WAWGSNSYGQL 1321

Query: 186  GINNSNTTVTK--PQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPK 243
            G     TT+ +  P +V  L +  IA IA G  H+  L KS + ++A+G  S  QL    
Sbjct: 1322 G---DGTTINRLTPVQVSGLTD-AIA-IAGGDYHTIAL-KSDNTVWAWGSNSYGQLGDVS 1375

Query: 244  SVHK-TP-QLIHGPWIASPVAMTAG 266
            + +  TP Q +  P +++  A+  G
Sbjct: 1376 TANSLTPAQCLLSPIVSTGTAINIG 1400



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 16/131 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G++H++A+   G ++ WG + +GQLG       + S P +V GL  V  +          
Sbjct: 401 GVYHTIAVKSDGTMWAWGYNWYGQLG--DGTTINSSTPVQVNGLTDVIAIAG-------- 450

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G +H++A+   G V+TWG + +GQLG  S   +S    + + G+ SV+      
Sbjct: 451 ------GYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNRSTPAQRSLSGMKSVATPTVTT 504

Query: 123 GYSHCLVLTSS 133
           G + C+ L+S+
Sbjct: 505 GSATCVSLSSA 515



 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 16/129 (12%)

Query: 4   LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 63
           L+H++AL   G V+TWG + +GQLG  S  ++S  +P +V GL  V  +           
Sbjct: 850 LYHTIALKSDGTVWTWGRNIYGQLGDGSTTERS--LPVQVIGLTDVIAIAG--------- 898

Query: 64  LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG 123
                G +H++AL   G V+ WG + + QLG  S    S  +      + SV+      G
Sbjct: 899 -----GYYHTIALKSDGAVWAWGYNGNNQLGNWSTKNSSTPVRSLRYDMNSVTTPAVITG 953

Query: 124 YSHCLVLTS 132
            + C+ L+S
Sbjct: 954 STTCVSLSS 962


>gi|326482820|gb|EGE06830.1| ubiquitin-protein ligase E3A [Trichophyton equinum CBS 127.97]
          Length = 1178

 Score = 97.1 bits (240), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 23/209 (11%)

Query: 884  GGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPF 943
            G R +S+I  P  +   K+  + FY   L    D+ +D+  W S     S +   C Y F
Sbjct: 713  GARELSSISEPNSNRLNKIPISCFYNARL-DYADLILDFEAWESR----SGKFSFCQYSF 767

Query: 944  IFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRE 1003
            +    AK  ++E D R QME    +  F   L       ++QYL ++V RD + ED+++ 
Sbjct: 768  LLSIWAKIQIMEHDARRQMEAKAREAFFDTILGR---RGVSQYLVLKVRRDCLAEDSLQS 824

Query: 1004 LAQY---TTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKY 1060
            ++        D KK L++            +F GEE  DAGG+R+E+ +LL++E+ DP +
Sbjct: 825  VSSVIGSAEEDIKKGLRI------------EFAGEEGIDAGGLRKEWFLLLVREVFDPLH 872

Query: 1061 GMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            G+F   E++R  +F+   FE    +FL+G
Sbjct: 873  GLFLYDEDSRYCYFNPYCFESSEQFFLVG 901



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 17/104 (16%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILD------EPIL 779
           E++R  +F+   FE     FL+G + GLAIYN TI+++  P   ++K+L        P L
Sbjct: 879 EDSRYCYFNPYCFESSEQFFLVGVVLGLAIYNSTILDIALPPFAFRKLLAYSPSNVAPTL 938

Query: 780 ----------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                     L DL +  P LAK L+ +L+Y + D+ + F   F
Sbjct: 939 SSPPQPFKPTLDDLAEFRPALAKGLRQLLEY-DGDVAETFCQDF 981


>gi|121702863|ref|XP_001269696.1| ubiquitin-protein ligase (Hul4), putative [Aspergillus clavatus NRRL
            1]
 gi|119397839|gb|EAW08270.1| ubiquitin-protein ligase (Hul4), putative [Aspergillus clavatus NRRL
            1]
          Length = 1199

 Score = 97.1 bits (240), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 106/209 (50%), Gaps = 23/209 (11%)

Query: 884  GGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPF 943
            G    S  R  A   G K+  ++FY   L    D+  D+  W S     +T+   C YP+
Sbjct: 734  GQEAGSASRGVATRRGHKIPISSFYN-TLLDYSDLVADFEAWESK----TTKFSFCQYPY 788

Query: 944  IFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRE 1003
                 AK  ++E D R QME    +  F   L       ++QYL ++V RD +V+D++R 
Sbjct: 789  FLSIWAKIHIMEHDARRQMEVKAREAFFNSILSR---KAVSQYLVLKVRRDCLVDDSLRS 845

Query: 1004 LAQY---TTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKY 1060
            +++    +  + KK L++            +F GEE  DAGG+R+E+ +LL++EI DP +
Sbjct: 846  VSEVVGSSEEEIKKGLRI------------EFVGEEGVDAGGLRKEWFLLLVREIFDPHH 893

Query: 1061 GMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            G+F   E+++  +F+   FE    +FL+G
Sbjct: 894  GLFLYDEDSQFCYFNPFCFESSEQFFLVG 922



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 18/112 (16%)

Query: 719  HYGITEYEETRSI-WFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL--- 774
            H+G+  Y+E     +F+   FE     FL+G L GLAIYN TI+++  P   +KK+L   
Sbjct: 892  HHGLFLYDEDSQFCYFNPFCFESSEQFFLVGVLLGLAIYNSTILDIALPPFAFKKLLAAA 951

Query: 775  -----DEPI--------LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                  +P          L DL +  P LAK L+ +L++ + D+ D F   F
Sbjct: 952  PPTSGPQPTTSRSNFKCTLDDLAEYRPALAKGLRGLLEF-DGDVMDTFCYDF 1002


>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
 gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
            norvegicus]
          Length = 4779

 Score = 97.1 bits (240), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3051 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3107

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3108 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3156

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3157 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3214

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3215 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3267



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    V+    G    
Sbjct: 4043 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVIDIACG---- 4096

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4097 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4148

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4149 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4208

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4209 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4264



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 2998 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3055

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3056 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3101

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3102 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3161

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3162 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3219

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3220 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3249



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 452 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 502

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 503 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 554

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 555 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 582

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 583 LGRGGSDGCKT-PKLIEKLQDLDVIKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 640

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 641 EHVRYPKLLEG 651



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 122/259 (47%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V++ G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 2955 GKVYSCGEATNGRLGL-GMSSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3003

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3004 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3061

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3062 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3120

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3121 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3178

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3179 FRLGHGSDVHVRKPQVVEG 3197



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 505 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 557

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + V++   
Sbjct: 558 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVIKVRC 610

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 611 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 670

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 671 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFAWS 723



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 129/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3890 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 3946

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 3947 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4006

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 4007 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4064

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  I      G+           +++WG+ +YG++G 
Sbjct: 4065 YGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4124

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS   +Y +G G   +L      H 
Sbjct: 4125 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKS-GAVYTWGKGDYHRLGHGSDDHV 4182

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4183 RRPRQVQGLQGKKVIAIATG 4202



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2904 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 2954

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V++ G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 2955 -----GKVYSCGEATNGRLGL-GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3008

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3009 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3062

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3063 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3111



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 112/260 (43%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G +  L+   T GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2882 GSTGSLIRKKTPGLESTATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2937

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V +C    NG        G+ P         S  V+   V 
Sbjct: 2938 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 2997

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 2998 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3056

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3057 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3113

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3114 DEGLVFSWGDGDFGKLGRGG 3133



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3157 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3214

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3215 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3260

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3261 GSSHSVAWTTVDVAT 3275



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 430 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 474

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 475 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 506

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 507 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 561

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 562 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 598


>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
          Length = 4834

 Score = 97.1 bits (240), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3163

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3164 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3212

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3213 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3270

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3271 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 4151

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4152 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4203

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4204 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4319



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3111

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3112 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3157

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3275

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3276 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3305



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 556

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 557 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 608

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 609 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 636

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 637 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 694

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 695 EHVRYPKLLEG 705



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3011 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3059

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3117

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3118 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3176

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3177 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3234

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3235 FRLGHGSDVHVRKPQVVEG 3253



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 611

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 612 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 664

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 725 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 4062 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4119

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4120 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4180 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4237

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4238 RRPRQVQGLQGKKVIAIATG 4257



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3010

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3011 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3064

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3065 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3118

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3119 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2938 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2993

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2994 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3112

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3113 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3169

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3170 DEGLVFSWGDGDFGKLGRGG 3189



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3213 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3270

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3271 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3316

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3317 GSSHSVAWTTVDVAT 3331



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 484 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 528

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 529 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 560

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 561 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 615

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 616 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 652


>gi|326474624|gb|EGD98633.1| hypothetical protein TESG_06113 [Trichophyton tonsurans CBS 112818]
          Length = 1178

 Score = 97.1 bits (240), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 23/209 (11%)

Query: 884  GGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPF 943
            G R +S+I  P  +   K+  + FY   L    D+ +D+  W S     S +   C Y F
Sbjct: 713  GARELSSISEPNSNRLNKIPISCFYNARL-DYADLILDFEAWESR----SGKFSFCQYSF 767

Query: 944  IFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRE 1003
            +    AK  ++E D R QME    +  F   L       ++QYL ++V RD + ED+++ 
Sbjct: 768  LLSIWAKIQIMEHDARRQMEAKAREAFFDTILGR---RGVSQYLVLKVRRDCLAEDSLQS 824

Query: 1004 LAQY---TTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKY 1060
            ++        D KK L++            +F GEE  DAGG+R+E+ +LL++E+ DP +
Sbjct: 825  VSSVIGSAEEDIKKGLRI------------EFAGEEGIDAGGLRKEWFLLLVREVFDPLH 872

Query: 1061 GMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            G+F   E++R  +F+   FE    +FL+G
Sbjct: 873  GLFLYDEDSRYCYFNPYCFESSEQFFLVG 901



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 17/104 (16%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILD------EPIL 779
           E++R  +F+   FE     FL+G + GLAIYN TI+++  P   ++K+L        P L
Sbjct: 879 EDSRYCYFNPYCFESSEQFFLVGVVLGLAIYNSTILDIALPPFAFRKLLAYSPSNVAPTL 938

Query: 780 ----------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                     L DL +  P LAK L+ +L+Y + D+ + F   F
Sbjct: 939 SSPPQPFKPTLDDLAEFRPALAKGLRQLLEY-DGDVAETFCQDF 981


>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
            familiaris]
          Length = 4837

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3164

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3165 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3213

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3271

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3272 AVTDAGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4101 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDVACG---- 4154

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4155 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4206

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4207 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4266

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4267 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4322



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3112

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3113 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3158

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ + 
Sbjct: 3219 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA- 3276

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3277 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3306



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 557

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 558 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 609

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 610 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 637

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 638 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 695

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 696 EHVRYPKLLEG 706



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3012 GKVYACGEATNGRLGL-GLSSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3060

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3118

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3119 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3177

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3178 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3235

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3236 FRLGHGSDVHVRKPQVVEG 3254



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 612

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 665

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4004

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4005 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4064

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 4065 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4122

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4123 YGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4182

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4183 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4240

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4241 RRPRQVQGLQGKKVIAIATG 4260



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3011

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3012 -----GKVYACGEATNGRLGL-GLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3065

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3066 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3119

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3120 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2939 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2994

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3113

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3114 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3170

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3171 DEGLVFSWGDGDFGKLGRGG 3190



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3271

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3272 AVT------------DAGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3317

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3318 GSSHSVAWTTIDVAT 3332



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 485 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 529

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 530 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 561

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 562 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 616

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 653


>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
 gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4834

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3163

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3164 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3212

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3213 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3270

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3271 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 4151

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4152 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4203

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4204 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4319



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3111

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3112 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3157

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3275

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3276 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3305



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 556

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 557 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 608

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 609 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 636

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 637 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 694

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 695 EHVRYPKLLEG 705



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3011 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3059

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3117

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3118 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3176

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3177 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3234

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3235 FRLGHGSDVHVRKPQVVEG 3253



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 611

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 612 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 664

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 725 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 4062 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4119

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4120 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4180 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4237

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4238 RRPRQVQGLQGKKVIAIATG 4257



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3010

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3011 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3064

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3065 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3118

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3119 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2938 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2993

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2994 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3112

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3113 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3169

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3170 DEGLVFSWGDGDFGKLGRGG 3189



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3213 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3270

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3271 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3316

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3317 GSSHSVAWTTVDVAT 3331



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 484 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 528

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 529 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 560

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 561 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 615

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 616 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 652


>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
           griseus]
 gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
          Length = 551

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 98/231 (42%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV   A    C 
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVMNIACGQMC- 216

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ D GEV+ WG + +GQLGL S+   +Q  P RV  L  + V +   
Sbjct: 217 ----------SMAVVDTGEVYVWGYNGNGQLGLGSSG--NQPTPCRVAALQGIRVQRVAC 264

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 265 GYAHTLVLTDE--------------------------------------GQVYAWGANSY 286

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 287 GQLGTGNKSNQSYPTPVVVEK--DRIIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 86.7 bits (213), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 114/275 (41%), Gaps = 60/275 (21%)

Query: 8   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHCLVLTS 66
           LA  D GEVFTWG + + QLG  +       +P  +   L++  V++   G  H LVLTS
Sbjct: 113 LATTD-GEVFTWGHNAYSQLG--NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
                        GEVF WG +  GQ+G  S    +Q IP+RV G     VV   A    
Sbjct: 170 D------------GEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVMNIA---- 211

Query: 127 CLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG 186
           C  + S  VV                                   GE+Y WG N  GQ+G
Sbjct: 212 CGQMCSMAVV---------------------------------DTGEVYVWGYNGNGQLG 238

Query: 187 INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH 246
           + +S    T P RV +L  + +  +ACG  H+ VL+    ++YA+G  S  QL +    +
Sbjct: 239 LGSSGNQPT-PCRVAALQGIRVQRVACGYAHTLVLTDE-GQVYAWGANSYGQLGTGNKSN 296

Query: 247 K---TPQLIHGPWIASPVAMTAGEDSLVSHSGGLV 278
           +   TP ++    I    A  +   S     GG V
Sbjct: 297 QSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHV 331


>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
 gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4836

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3164

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3165 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3213

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3271

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3272 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    V+    G    
Sbjct: 4100 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVIDIACG---- 4153

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4154 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4205

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4206 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4266 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4321



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3112

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3113 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3158

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3219 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3276

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3277 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3306



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 557

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 558 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 609

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 610 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 637

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 638 LGRGGSDGCKT-PKLIEKLQDLDVIKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 695

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 696 EHVRYPKLLEG 706



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 122/259 (47%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V++ G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3012 GKVYSCGEATNGRLGL-GMSSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3060

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3118

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3119 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3177

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3178 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3235

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3236 FRLGHGSDVHVRKPQVVEG 3254



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 612

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + V++   
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVIKVRC 665

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L +  I  IACG   SF  S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS 778



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4003

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4004 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4063

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 4064 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4121

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  I      G+           +++WG+ +YG++G 
Sbjct: 4122 YGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4181

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4182 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4239

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4240 RRPRQVQGLQGKKVIAIATG 4259



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3011

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V++ G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3012 -----GKVYSCGEATNGRLGL-GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3065

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3066 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3119

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3120 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 112/260 (43%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G +  L+   T GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2939 GSTGSLIRKKTPGLESTATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2994

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V +C    NG        G+ P         S  V+   V 
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3113

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3114 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3170

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3171 DEGLVFSWGDGDFGKLGRGG 3190



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3271

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3272 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3317

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3318 GSSHSVAWTTVDVAT 3332



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 485 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 529

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 530 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 561

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 562 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 616

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 653


>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
          Length = 4836

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGTRDA- 3164

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3165 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3213

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3271

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3272 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    V+    G    
Sbjct: 4100 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVIDIACG---- 4153

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4154 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GSKVPMKIDSLTGLGVVKVE 4205

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4206 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4266 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4321



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3112

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3113 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3158

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3159 CGTRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3219 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3276

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3277 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3306



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 557

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 558 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 609

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 610 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 637

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 638 LGRGGSDGCKT-PKLIEKLQDLDVIKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGLGTE 695

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 696 EHVRYPKLLEG 706



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 122/259 (47%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V++ G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3012 GKVYSCGEATNGRLGL-GMSSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3060

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3118

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3119 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFS 3177

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3178 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3235

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3236 FRLGHGSDVHVRKPQVVEG 3254



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 612

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + V++   
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVIKVRC 665

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L +  I  IACG   SF  S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS 778



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 131/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4003

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4004 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4063

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 4064 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4121

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  I      G+           +++WG+ +YG++G 
Sbjct: 4122 YGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4181

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+ +   P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4182 GGSDGSKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4239

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4240 RRPRQVQGLQGKKVIAIATG 4259



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3011

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V++ G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3012 -----GKVYSCGEATNGRLGL-GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3065

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3066 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3119

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG   +  L+
Sbjct: 3120 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLA 3168



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 112/260 (43%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G +  L+   T GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2939 GSTGSLIRKKTPGLESTATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2994

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V +C    NG        G+ P         S  V+   V 
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3113

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3114 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALT-- 3170

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3171 DEGLVFSWGDGDFGKLGRGG 3190



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3271

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3272 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3317

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3318 GSSHSVAWTTVDVAT 3332



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 485 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 529

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 530 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 561

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 562 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 616

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 653


>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
            musculus]
          Length = 4902

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3174 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3230

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3231 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3279

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3280 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3337

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3338 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3390



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    V+    G    
Sbjct: 4166 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVIDIACG---- 4219

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4220 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4271

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4272 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4331

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4332 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4387



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3121 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3178

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3179 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3224

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3225 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3284

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3285 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3342

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3343 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3372



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 575 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 625

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 626 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 677

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 678 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 705

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 706 LGRGGSDGCKT-PKLIEKLQDLDVIKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 763

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 764 EHVRYPKLLEG 774



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 122/259 (47%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V++ G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3078 GKVYSCGEATNGRLGL-GMSSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3126

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3127 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3184

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3185 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3243

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3244 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3301

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3302 FRLGHGSDVHVRKPQVVEG 3320



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 628 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 680

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + V++   
Sbjct: 681 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVIKVRC 733

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 734 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 793

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L +  I  IACG   SF  S
Sbjct: 794 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS 846



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 4013 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4069

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4070 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4129

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 4130 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4187

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  I      G+           +++WG+ +YG++G 
Sbjct: 4188 YGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4247

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4248 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4305

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4306 RRPRQVQGLQGKKVIAIATG 4325



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 3027 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3077

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V++ G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3078 -----GKVYSCGEATNGRLGL-GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3131

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3132 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3185

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3186 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3234



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 112/260 (43%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G +  L+   T GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 3005 GSTGSLIRKKTPGLESTATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 3060

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V +C    NG        G+ P         S  V+   V 
Sbjct: 3061 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3120

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3121 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3179

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3180 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3236

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3237 DEGLVFSWGDGDFGKLGRGG 3256



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3280 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3337

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3338 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3383

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3384 GSSHSVAWTTVDVAT 3398



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 553 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 597

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 598 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 629

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 630 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 684

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 685 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 721


>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 3660

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    VVQ   G     
Sbjct: 1942 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLVGHRVVQVACGSRDA- 1998

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  ++P+ ++ L    V Q   
Sbjct: 1999 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNVPQNIERLNGQGVCQIEC 2047

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 2048 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 2105

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 2106 AVTDAGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2158



 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 105/237 (44%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G ++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 2934 AGGAHSACVTAAGGLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDVACG---- 2987

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L +   V++WG   +G+LG   +D     +P +V  L  +  V+  
Sbjct: 2988 ------SGDAQTLCLTEDDTVWSWGDGDYGKLGRGGSD--GCKVPMKVDALTGLGAVKVE 3039

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 3040 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3099

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 3100 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 3155



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L S  +     G SH 
Sbjct: 1889 SGGRHATALTADGKVFSWGEGDDGKLGHFS--RXNCDKPRLIEALKSRRIRDIACGSSHS 1946

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    VVQ  
Sbjct: 1947 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLVGHRVVQVA 1992

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      V  N+ + +   +          
Sbjct: 1993 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFS 2052

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ + 
Sbjct: 2053 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA- 2110

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 2111 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 2140



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 119/260 (45%), Gaps = 36/260 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  +P++V  L+S  VV+  A +S         G  H+
Sbjct: 1846 GKVYACGEATNGRLGL-GVSSGTVPVPRQVTALSSY-VVKKVAVHS---------GGRHA 1894

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L S  +     G SH   LTSS
Sbjct: 1895 TALTADGKVFSWGEGDDGKLGHFS--RXNCDKPRLIEALKSRRIRDIACGSSHSAALTSS 1952

Query: 134  GVV---------TCTHKENGCGSDPSQG---VQSNLVQ------DSHTTITSLNSPGELY 175
            G +            H +N     P      V   +VQ      D+ T   +L   G ++
Sbjct: 1953 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQT--LALTDEGLVF 2010

Query: 176  TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
            +WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G 
Sbjct: 2011 SWGDGDFGKLGRGGSE-GCNVPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGD 2068

Query: 236  AVQLDSPKSVH-KTPQLIHG 254
              +L     VH + PQ++ G
Sbjct: 2069 YFRLGHGSDVHVRKPQVVEG 2088



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 128/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G V+ WG +  GQL G+E A  K   +P   + LA++   Q   G      +T
Sbjct: 2781 TLSAGGSGTVYGWGHNHRGQLGGVEGAKVK---VPTPCEALAALRPAQLIGGEQTLFAVT 2837

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 2838 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 2897

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS-GVVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++ G+ T     
Sbjct: 2898 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGR 2955

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 2956 YGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGR 3015

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +V++L  L    + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 3016 GGSDGCKV-PMKVDALTGLGAVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 3073

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 3074 RRPRQVQGLQGKKVIAIATG 3093



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 36/236 (15%)

Query: 81   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCT 139
            +VF WG +   QLG     K    +P   + L++++ VQ   G      +T  G V  C 
Sbjct: 1795 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNAVQVAGGSKSLFAVTVEGKVYACG 1852

Query: 140  HKENG-------CGSDP---------SQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
               NG        G+ P         S  V+   V       T+L + G++++WG  + G
Sbjct: 1853 EATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDDG 1912

Query: 184  QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD--- 240
            ++G + S     KP+ +E+L +  I  IACG++HS  L+ S   LY +G+G   +L    
Sbjct: 1913 KLG-HFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSS-GELYTWGLGEYGRLGHGD 1970

Query: 241  -----SPKSV-----HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
                  PK V     H+  Q+  G   A  +A+T  ++ LV   G     K+  GG
Sbjct: 1971 NTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALT--DEGLVFSWGDGDFGKLGRGG 2024



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 2048 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 2105

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 2106 AVT------------DAGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 2151

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 2152 GSSHSVAWTTVDVAT 2166


>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pan troglodytes]
          Length = 4776

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3100 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3156

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3157 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3205

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3206 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3263

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3264 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3316



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4040 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 4093

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4094 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4145

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4146 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4205

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4206 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4261



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3047 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3104

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3105 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3150

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3151 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3210

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3211 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3268

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3269 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3298



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 556

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 557 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVA--- 609

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 610 --------------------CGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 636

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 637 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 694

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 695 EHVRYPKLLEG 705



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3004 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3052

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3053 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3110

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3111 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3169

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3170 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3227

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3228 FRLGHGSDVHVRKPQVVEG 3246



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 611

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 612 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 664

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 725 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2953 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3003

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3004 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3057

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3058 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3111

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3112 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3160



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2931 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2986

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2987 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3046

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3047 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3105

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3106 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3162

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3163 DEGLVFSWGDGDFGKLGRGG 3182



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3206 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3263

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3264 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3309

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3310 GSSHSVAWTTVDVAT 3324



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 484 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 528

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 529 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 560

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 561 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 615

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 616 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 652



 Score = 46.2 bits (108), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 3/89 (3%)

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L+S GE+Y+WG  E G++G  N  +   +P+ +ESL  + +  +A G  HS  ++ +  
Sbjct: 3995 ALSSEGEVYSWGEAEDGKLGHGN-RSPCDRPRVIESLRGIEVVDVAAGGAHSACVT-AAG 4052

Query: 227  RLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
             LY +G G   +L    S  +  P+L+  
Sbjct: 4053 DLYTWGKGRYGRLGHSDSEDQLKPKLVEA 4081


>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3163

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3164 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3212

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3213 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3270

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3271 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 4151

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4152 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4203

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4204 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4319



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3111

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3112 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3157

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3275

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3276 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3305



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 556

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 557 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 608

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 609 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 636

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 637 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 694

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 695 EHVRYPKLLEG 705



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3011 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3059

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3117

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3118 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3176

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3177 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3234

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3235 FRLGHGSDVHVRKPQVVEG 3253



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 611

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 612 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 664

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 725 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 4062 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4119

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4120 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4180 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4237

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4238 RRPRQVQGLQGKKVIAIATG 4257



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3010

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3011 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3064

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3065 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3118

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3119 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2938 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2993

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2994 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3112

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3113 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3169

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3170 DEGLVFSWGDGDFGKLGRGG 3189



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3213 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3270

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3271 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3316

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3317 GSSHSVAWTTVDVAT 3331



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 484 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 528

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 529 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 560

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 561 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 615

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 616 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 652


>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3163

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3164 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3212

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3213 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3270

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3271 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 4151

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4152 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4203

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4204 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4319



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3111

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3112 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3157

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3275

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3276 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3305



 Score = 77.8 bits (190), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 556

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 557 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 608

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 609 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 636

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 637 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 694

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 695 EHVRYPKLLEG 705



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3011 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3059

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3117

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3118 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3176

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3177 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3234

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3235 FRLGHGSDVHVRKPQVVEG 3253



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 611

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 612 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 664

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 725 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 4062 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4119

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4120 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4180 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4237

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4238 RRPRQVQGLQGKKVIAIATG 4257



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3010

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3011 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3064

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3065 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3118

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3119 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2938 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2993

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2994 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3112

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3113 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3169

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3170 DEGLVFSWGDGDFGKLGRGG 3189



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3213 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3270

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3271 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3316

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3317 GSSHSVAWTTVDVAT 3331



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 484 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 528

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 529 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 560

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 561 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 615

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 616 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 652


>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
          Length = 4833

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3110 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3166

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3167 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3215

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3216 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3273

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3274 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3326



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 108/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4102 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEVLQGHRVVDVACG---- 4155

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P +++ L  + VV+  
Sbjct: 4156 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIESLTGLGVVKVE 4207

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4208 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4267

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4268 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4323



 Score = 83.6 bits (205), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3057 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALRAKRIRDIACGSSHS 3114

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3115 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3160

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3161 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3220

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3221 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3278

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3279 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3308



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 111/250 (44%), Gaps = 51/250 (20%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL   GEVF+WG    G+LG    D      PK       +S      G  H  V+ 
Sbjct: 507 HYLALAATGEVFSWGCGDGGRLG--HGDTVPLEEPK------VISAFSGKQGGKH--VVH 556

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+       
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVA---- 610

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CGS            D+ T   + N  G++++WG+ +YG++
Sbjct: 611 -------------------CGSG-----------DAQTLAVTEN--GQVWSWGDGDYGKL 638

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
           G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L      
Sbjct: 639 GRGGSDGCKT-PKLIEKLQDLEVVKVRCGSQFSVALTKD-GQVYSWGKGDNQRLGHGTEE 696

Query: 246 H-KTPQLIHG 254
           H + P+L+ G
Sbjct: 697 HVRYPRLLEG 706



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3014 GKVYACGEATNGRLGL-GLSSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3062

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3063 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALRAKRIRDIACGSSHSAALTSS 3120

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3121 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3179

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3180 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3237

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3238 FRLGHGSDVHVRKPQVVEG 3256



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 76/320 (23%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3949 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4005

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4006 ADGKLYATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVY 4065

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG  S  +     P+ V+ L  + VV   AG +H   +T++G + T     
Sbjct: 4066 SWGEAEDGKLGHGS--RSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4123

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4124 YGRLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4183

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P ++ESL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4184 GGSDGCKV-PMKIESLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4241

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4242 RRPRQVQGLQGKKVIAIATG 4261



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 612

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLEVVKVRC 665

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+    V D     T   +L
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLAL 725

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2963 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3013

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3014 -----GKVYACGEATNGRLGL-GLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3067

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3068 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSA--ALTSSG 3121

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3122 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3170



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 112/260 (43%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+   + GL  S A+    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2941 GSSGSLIRKKSAGLESSAAVRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2996

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2997 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVH 3056

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3057 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALRAKRIRDIACGSSHSA 3115

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3116 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3172

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3173 DEGLVFSWGDGDFGKLGRGG 3192



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 27/147 (18%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S+AL   G V+TWG   + +LG  S D   +  P++V+GL    V+    G  HC+  T 
Sbjct: 4213 SVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQVQGLQGKKVIAIATGSLHCVCCTE 4270

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGY 124
                         GEV+TWG +  GQLG    D  + +I  P+ V  L    V +   G 
Sbjct: 4271 D------------GEVYTWGDNDEGQLG----DGTTNAIQRPRLVAALQGKKVNRVACGS 4314

Query: 125  SHCLVLTSSGVVTCTHKENGCGSDPSQ 151
            +H L  ++S       K +  G  P+Q
Sbjct: 4315 AHTLAWSTS-------KPSSAGKLPAQ 4334



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3216 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3273

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3274 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3319

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3320 GSSHSVAWTTVDVAT 3334



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 91/216 (42%), Gaps = 49/216 (22%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEVF+WG    G+LG    D
Sbjct: 485 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVFSWGCGDGGRLG--HGD 532

Query: 100 KKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQ 159
                 PK       +S      G  H + +              CGS            
Sbjct: 533 TVPLEEPK------VISAFSGKQGGKHVVHIA-------------CGS------------ 561

Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
              T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  + 
Sbjct: 562 ---TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 220 VLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
            L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 653


>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3163

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3164 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3212

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3213 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3270

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3271 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 4151

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4152 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4203

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4204 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4319



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3111

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3112 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3157

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3275

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3276 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3305



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 556

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 557 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 608

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 609 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 636

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 637 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 694

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 695 EHVRYPKLLEG 705



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3011 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3059

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3117

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3118 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3176

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3177 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3234

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3235 FRLGHGSDVHVRKPQVVEG 3253



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 611

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 612 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 664

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 725 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 4062 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4119

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4120 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4180 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4237

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4238 RRPRQVQGLQGKKVIAIATG 4257



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3010

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3011 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3064

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3065 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3118

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3119 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2938 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2993

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2994 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3112

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3113 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3169

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3170 DEGLVFSWGDGDFGKLGRGG 3189



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3213 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3270

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3271 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3316

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3317 GSSHSVAWTTVDVAT 3331



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 484 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 528

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 529 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 560

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 561 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 615

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 616 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 652


>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3163

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3164 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3212

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3213 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3270

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3271 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 4151

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4152 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4203

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4204 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4319



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3111

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3112 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3157

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3275

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3276 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3305



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 556

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 557 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 608

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 609 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 636

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 637 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 694

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 695 EHVRYPKLLEG 705



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3011 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3059

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3117

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3118 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3176

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3177 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3234

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3235 FRLGHGSDVHVRKPQVVEG 3253



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 611

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 612 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 664

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 725 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 4062 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4119

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4120 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4180 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4237

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4238 RRPRQVQGLQGKKVIAIATG 4257



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3010

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3011 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3064

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3065 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3118

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3119 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2938 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2993

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2994 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3112

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3113 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3169

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3170 DEGLVFSWGDGDFGKLGRGG 3189



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3213 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3270

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3271 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3316

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3317 GSSHSVAWTTVDVAT 3331



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 484 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 528

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 529 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 560

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 561 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 615

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 616 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 652


>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
            musculus]
          Length = 4841

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3113 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3169

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3170 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3218

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3219 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3276

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3277 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3329



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    V+    G    
Sbjct: 4105 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVIDIACG---- 4158

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4159 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4210

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4211 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4270

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4271 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4326



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3060 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3117

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3118 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3163

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3164 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3223

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3224 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3281

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3282 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3311



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 512 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 562

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 563 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 614

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 615 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 642

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 643 LGRGGSDGCKT-PKLIEKLQDLDVIKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 700

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 701 EHVRYPKLLEG 711



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 122/259 (47%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V++ G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3017 GKVYSCGEATNGRLGL-GMSSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3065

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3066 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3123

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3124 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3182

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3183 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3240

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3241 FRLGHGSDVHVRKPQVVEG 3259



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 565 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 617

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + V++   
Sbjct: 618 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVIKVRC 670

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 671 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 730

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L +  I  IACG   SF  S
Sbjct: 731 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS 783



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3952 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4008

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4009 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4068

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 4069 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4126

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  I      G+           +++WG+ +YG++G 
Sbjct: 4127 YGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4186

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4187 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4244

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4245 RRPRQVQGLQGKKVIAIATG 4264



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2966 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3016

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V++ G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3017 -----GKVYSCGEATNGRLGL-GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3070

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3071 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3124

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3125 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3173



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 112/260 (43%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G +  L+   T GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2944 GSTGSLIRKKTPGLESTATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2999

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V +C    NG        G+ P         S  V+   V 
Sbjct: 3000 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3059

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3060 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3118

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3119 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3175

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3176 DEGLVFSWGDGDFGKLGRGG 3195



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3219 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3276

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3277 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3322

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3323 GSSHSVAWTTVDVAT 3337



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 490 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 534

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 535 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 566

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 567 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 621

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 622 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 658


>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4834

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3163

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3164 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3212

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3213 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3270

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3271 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 4151

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4152 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4203

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4204 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4319



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3111

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3112 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3157

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3275

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3276 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3305



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 556

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 557 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 608

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 609 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 636

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 637 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 694

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 695 EHVRYPKLLEG 705



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3011 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3059

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3117

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3118 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3176

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3177 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3234

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3235 FRLGHGSDVHVRKPQVVEG 3253



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 611

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 612 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 664

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 725 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 4062 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4119

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4120 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4180 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4237

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4238 RRPRQVQGLQGKKVIAIATG 4257



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3010

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3011 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3064

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3065 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3118

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3119 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2938 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2993

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2994 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3112

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3113 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3169

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3170 DEGLVFSWGDGDFGKLGRGG 3189



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3213 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3270

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3271 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3316

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3317 GSSHSVAWTTVDVAT 3331



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 484 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 528

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 529 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 560

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 561 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 615

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 616 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 652


>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
          Length = 4835

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3106 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3162

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3163 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3211

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3212 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3269

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3270 AVTDAGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3322



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 108/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4099 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDVACG---- 4152

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4153 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4204

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4205 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4264

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
             +  GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4265 CSEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4320



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3053 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3110

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3111 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3156

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3157 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3216

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ + 
Sbjct: 3217 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA- 3274

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3275 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3304



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 557

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 558 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 609

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 610 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 637

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 638 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSVALTKD-GQVYSWGKGDNQRLGHGTE 695

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 696 EHVRYPKLLEG 706



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3010 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3058

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3059 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3116

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3117 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3175

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3176 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3233

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3234 FRLGHGSDVHVRKPQVVEG 3252



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 612

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 665

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 129/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3946 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALAALRPVQLIGGEQTLFAVT 4002

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4003 ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4062

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L    VV   AG +H   +T++G + T     
Sbjct: 4063 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGR 4120

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4121 YGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4180

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4181 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4238

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4239 RRPRQVQGLQGKKVIAIATG 4258



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2959 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3009

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3010 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3063

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3064 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3117

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3118 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3166



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2937 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2992

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2993 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3052

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3053 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3111

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3112 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3168

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3169 DEGLVFSWGDGDFGKLGRGG 3188



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3212 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3269

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3270 AVT------------DAGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3315

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3316 GSSHSVAWTTVDVAT 3330



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 485 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 529

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 530 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 561

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 562 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 616

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 653


>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
            catus]
          Length = 4837

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3164

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3165 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3213

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3271

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3272 AVTDAGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4101 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHHVVDVACG---- 4154

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4155 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4206

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4207 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4266

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4267 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4322



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3112

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3113 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3158

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ + 
Sbjct: 3219 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA- 3276

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3277 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3306



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 557

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 558 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPVLVAGLKGLKVIDV---- 609

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 610 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 637

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 638 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 695

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 696 EHVRYPKLLEG 706



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3012 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3060

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3118

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3119 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3177

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3178 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3235

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3236 FRLGHGSDVHVRKPQVVEG 3254



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPVLVAGLKGLKVIDVACG----- 612

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 665

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4004

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4005 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4064

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 4065 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4122

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4123 YGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4182

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4183 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4240

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4241 RRPRQVQGLQGKKVIAIATG 4260



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3011

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3012 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3065

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3066 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3119

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3120 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2939 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2994

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3113

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3114 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3170

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3171 DEGLVFSWGDGDFGKLGRGG 3190



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3271

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3272 AVT------------DAGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3317

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3318 GSSHSVAWTTVDVAT 3332



 Score = 53.9 bits (128), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 485 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 529

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 530 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 561

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 562 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PVLVAGLKGLKVIDVACGSGDA 616

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 653


>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Pan paniscus]
          Length = 4839

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3112 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3168

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3169 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3217

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3218 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3275

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3276 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3328



 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4103 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 4156

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4157 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4208

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4209 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4269 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4324



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3059 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3116

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3117 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3162

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3163 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3222

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3223 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3280

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3281 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3310



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 452 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 502

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 503 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 554

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 555 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 582

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 583 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 640

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 641 EHVRYPKLLEG 651



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3016 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3064

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3065 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3122

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3123 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3181

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3182 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3239

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3240 FRLGHGSDVHVRKPQVVEG 3258



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 505 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 557

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 558 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 610

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 611 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 670

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 671 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 723



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4006

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4007 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4066

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 4067 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4124

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4125 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4184

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4185 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4242

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4243 RRPRQVQGLQGKKVIAIATG 4262



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2965 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3015

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3016 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3069

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3070 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3123

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3124 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3172



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2943 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2998

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2999 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3058

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3059 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3117

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3118 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3174

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3175 DEGLVFSWGDGDFGKLGRGG 3194



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3218 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3275

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3276 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3321

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3322 GSSHSVAWTTVDVAT 3336



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 430 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 474

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 475 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 506

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 507 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 561

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 562 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 598


>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
            [Equus caballus]
          Length = 4840

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3111 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3167

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3168 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3216

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3217 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3274

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3275 AVTDAGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4104 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDVACG---- 4157

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4158 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4209

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4210 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4269

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4270 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVPALQGKKVNRVACGSAHTLAWSTS 4325



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3058 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3115

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3116 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3161

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3162 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3221

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ + 
Sbjct: 3222 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA- 3279

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3280 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3309



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 557

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   +++P  V GL  + V+      
Sbjct: 558 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAVPMLVAGLKGLKVIDV---- 609

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 610 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 637

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 638 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 695

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 696 EHVRYPKLLEG 706



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   +++P  V GL  + V+    G     
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAVPMLVAGLKGLKVIDVACG----- 612

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 665

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3951 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4007

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4008 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4067

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + +V   AG +H   +T++G + T     
Sbjct: 4068 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGR 4125

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4126 YGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4185

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4186 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4243

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4244 RRPRQVQGLQGKKVIAIATG 4263



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 52/209 (24%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP++V  L+S  VV+  A +S         G  H+
Sbjct: 3015 GKVYACGEATNGRLGL-GISSGTVPIPRQVTALSSY-VVKKVAVHS---------GGRHA 3063

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3064 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3121

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            G                                      ELYTWG  EYG++G +  NTT
Sbjct: 3122 G--------------------------------------ELYTWGLGEYGRLG-HGDNTT 3142

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLS 222
              KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3143 QLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3217 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3274

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3275 AVT------------DAGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3320

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  + T
Sbjct: 3321 GSSHSVAWTTVDMAT 3335



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 485 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 529

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 530 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 561

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 562 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAV-PMLVAGLKGLKVIDVACGSGDA 616

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 653



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 34/212 (16%)

Query: 105  IPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP------- 149
            +P   + L++++VVQ   G      +T  G V  C    NG        G+ P       
Sbjct: 2986 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQVTA 3045

Query: 150  --SQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLP 207
              S  V+   V       T+L   G++++WG  + G++G + S     KP+ +E+L    
Sbjct: 3046 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKR 3104

Query: 208  IALIACGANHSFVLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHG 254
            I  IACG++HS  L+ S   LY +G+G   +L          PK V     H+  Q+  G
Sbjct: 3105 IRDIACGSSHSAALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 3163

Query: 255  PWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
               A  +A+T  ++ LV   G     K+  GG
Sbjct: 3164 SRDAQTLALT--DEGLVFSWGDGDFGKLGRGG 3193


>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
 gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
          Length = 4837

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3164

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3165 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3213

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3271

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3272 AVTDAGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 108/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4101 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDVACG---- 4154

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4155 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4206

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4207 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4266

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
             +  GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4267 CSEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4322



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3112

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3113 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3158

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ + 
Sbjct: 3219 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA- 3276

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3277 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3306



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 557

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 558 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 609

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 610 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 637

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 638 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSVALTKD-GQVYSWGKGDNQRLGHGTE 695

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 696 EHVRYPKLLEG 706



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3012 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3060

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3118

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3119 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3177

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3178 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3235

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3236 FRLGHGSDVHVRKPQVVEG 3254



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 612

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 665

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 129/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALAALRPVQLIGGEQTLFAVT 4004

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4005 ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4064

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L    VV   AG +H   +T++G + T     
Sbjct: 4065 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGR 4122

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4123 YGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4182

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4183 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4240

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4241 RRPRQVQGLQGKKVIAIATG 4260



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3011

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3012 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3065

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3066 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3119

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3120 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2939 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2994

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3113

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3114 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3170

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3171 DEGLVFSWGDGDFGKLGRGG 3190



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3271

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3272 AVT------------DAGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3317

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3318 GSSHSVAWTTVDVAT 3332



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 485 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 529

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 530 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 561

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 562 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 616

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 653


>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4829

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3102 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3158

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3159 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3207

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3208 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3265

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3266 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3318



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4093 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 4146

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4147 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4198

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4199 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4258

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4259 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4314



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3049 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3106

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3107 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3152

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3153 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3212

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3213 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3270

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3271 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3300



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 556

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 557 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 608

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 609 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 636

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 637 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 694

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 695 EHVRYPKLLEG 705



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3006 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3054

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3055 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3112

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3113 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3171

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3172 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3229

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3230 FRLGHGSDVHVRKPQVVEG 3248



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 611

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 612 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 664

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 725 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3940 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 3996

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 3997 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4056

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 4057 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4114

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4115 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4174

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4175 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4232

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4233 RRPRQVQGLQGKKVIAIATG 4252



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2955 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3005

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3006 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3059

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3060 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3113

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3114 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3162



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2933 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2988

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2989 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3048

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3049 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3107

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3108 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3164

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3165 DEGLVFSWGDGDFGKLGRGG 3184



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3208 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3265

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3266 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3311

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3312 GSSHSVAWTTVDVAT 3326



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 484 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 528

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 529 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 560

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 561 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 615

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 616 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 652


>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
            catus]
          Length = 4844

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3115 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3171

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3172 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3220

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3221 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3278

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3279 AVTDAGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3331



 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4108 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHHVVDVACG---- 4161

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4162 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4213

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4214 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4273

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4274 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4329



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3062 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3119

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3120 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3165

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3166 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3225

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ + 
Sbjct: 3226 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA- 3283

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3284 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3313



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 557

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 558 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPVLVAGLKGLKVIDV---- 609

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 610 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 637

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 638 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 695

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 696 EHVRYPKLLEG 706



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3019 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3067

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3068 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3125

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3126 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3184

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3185 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3242

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3243 FRLGHGSDVHVRKPQVVEG 3261



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPVLVAGLKGLKVIDVACG----- 612

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 665

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3955 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4011

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4012 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4071

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 4072 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4129

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4130 YGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4189

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4190 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4247

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4248 RRPRQVQGLQGKKVIAIATG 4267



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2968 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3018

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3019 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3072

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3073 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3126

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3127 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3175



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2946 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 3001

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 3002 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3061

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3062 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3120

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3121 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3177

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3178 DEGLVFSWGDGDFGKLGRGG 3197



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3221 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3278

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3279 AVT------------DAGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3324

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3325 GSSHSVAWTTVDVAT 3339



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 485 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 529

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 530 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 561

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 562 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PVLVAGLKGLKVIDVACGSGDA 616

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 653


>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3163

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3164 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3212

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3213 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3270

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3271 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 4151

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4152 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4203

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4204 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4319



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3111

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3112 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3157

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3275

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3276 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3305



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 556

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 557 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 608

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 609 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 636

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 637 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 694

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 695 EHVRYPKLLEG 705



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3011 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3059

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3117

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3118 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3176

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3177 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3234

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3235 FRLGHGSDVHVRKPQVVEG 3253



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 611

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 612 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 664

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 725 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 4062 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4119

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4120 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4180 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4237

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4238 RRPRQVQGLQGKKVIAIATG 4257



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3010

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3011 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3064

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3065 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3118

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3119 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2938 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2993

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2994 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3112

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3113 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3169

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3170 DEGLVFSWGDGDFGKLGRGG 3189



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3213 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3270

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3271 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3316

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3317 GSSHSVAWTTVDVAT 3331



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 484 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 528

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 529 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 560

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 561 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 615

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 616 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 652


>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Cricetulus griseus]
          Length = 4836

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3164

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3165 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3213

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3271

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3272 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    V+    G    
Sbjct: 4100 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVIDIACG---- 4153

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4154 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4205

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4206 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4266 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4321



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3112

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3113 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3158

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3219 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3276

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3277 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3306



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 557

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 558 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 609

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 610 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 637

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 638 LGRGGSDGCKT-PKLIEKLQDLDVIKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 695

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 696 EHVRYPKLLEG 706



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 122/259 (47%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V++ G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3012 GKVYSCGEATNGRLGL-GMSSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3060

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3118

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3119 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3177

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3178 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3235

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3236 FRLGHGSDVHVRKPQVVEG 3254



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 612

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + V++   
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVIKVRC 665

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4003

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4004 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4063

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 4064 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4121

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  I      G+           +++WG+ +YG++G 
Sbjct: 4122 YGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4181

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4182 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4239

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4240 RRPRQVQGLQGKKVIAIATG 4259



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3011

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V++ G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3012 -----GKVYSCGEATNGRLGL-GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3065

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3066 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3119

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3120 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 112/260 (43%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G +  L+   T GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2939 GSTGSLIRKKTAGLESTATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2994

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V +C    NG        G+ P         S  V+   V 
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3113

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3114 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3170

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3171 DEGLVFSWGDGDFGKLGRGG 3190



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3271

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3272 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3317

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3318 GSSHSVAWTTVDVAT 3332



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 485 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 529

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 530 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 561

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 562 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 616

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 653


>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
 gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
          Length = 404

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 126/263 (47%), Gaps = 49/263 (18%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           TGL HSLAL+  G V++WG + +GQLG  +   +  SIP +V+ L+++  ++A A     
Sbjct: 140 TGLVHSLALDQSGAVWSWGENIYGQLG--NGTNQDSSIPTKVEFLSNIVAIEAGAE---- 193

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                     HSLAL++ G+V+ WG +  GQLG  + + +  +IP+ VK L ++ ++   
Sbjct: 194 ----------HSLALSNDGKVWAWGRNEFGQLG--NGETEKSNIPRLVKNLENIEMI--A 239

Query: 122 AGYSHCLVLTSSGVV-TCTHKENGCGSDPSQGV---QSNLVQDSHTT------------- 164
            G +H L L   G +    +  NG   D S  V      L +  + T             
Sbjct: 240 GGDNHSLALDHDGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVK 299

Query: 165 --------ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN 216
                    T+L   GE+Y WG NEYGQ+G N S      P R  + V   I  I  G+ 
Sbjct: 300 QVSAGIKHSTALTENGEVYAWGWNEYGQLG-NGSMKDSKVPLR--NNVGRSIIDIETGSY 356

Query: 217 HSFVLSKSVSRLYAFGIGSAVQL 239
           HSF + +S   +YA+G  +  QL
Sbjct: 357 HSFAVDES-GVIYAWGDATYGQL 378



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 114/248 (45%), Gaps = 65/248 (26%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LA+   G V+ WG ++ G++   +   K+ + P ++ GL  +  V             
Sbjct: 95  HTLAITKHGTVWGWGYNSKGEI---TEGGKNIARPVQINGLKDIVQV------------- 138

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            +TGL HSLAL+  G V++WG + +GQLG  +   +  SIP +V+ L+++  ++A A   
Sbjct: 139 -STGLVHSLALDQSGAVWSWGENIYGQLG--NGTNQDSSIPTKVEFLSNIVAIEAGA--E 193

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           H L L+                                      + G+++ WG NE+GQ+
Sbjct: 194 HSLALS--------------------------------------NDGKVWAWGRNEFGQL 215

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL-DSPKS 244
           G N        P+ V++L N  I +IA G NHS  L      ++A+G  S  Q+ D   +
Sbjct: 216 G-NGETEKSNIPRLVKNLEN--IEMIAGGDNHSLALDHD-GAIWAWGYNSNGQIGDGSSN 271

Query: 245 VH-KTPQL 251
           V+ K  QL
Sbjct: 272 VYEKDGQL 279



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 16/109 (14%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G+ HS AL + GEV+ WG + +GQLG  +   K   +P R              G S  
Sbjct: 303 AGIKHSTALTENGEVYAWGWNEYGQLG--NGSMKDSKVPLR-----------NNVGRS-- 347

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK 110
            ++   TG +HS A+++ G ++ WG  T+GQLG  +  K    I   V+
Sbjct: 348 -IIDIETGSYHSFAVDESGVIYAWGDATYGQLGDGTFGKDGNRITYMVR 395


>gi|222528951|ref|YP_002572833.1| chromosome condensation regulator RCC1 [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222455798|gb|ACM60060.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 743

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 122/251 (48%), Gaps = 37/251 (14%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            GL+HSLAL   G V++WG +  G+LG    +  + S+P RVKGL+ V  + A       
Sbjct: 199 AGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISA------- 251

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS-IPKRVKGLASVSVVQA 120
                  G +HS+ALN  G V+ WGG       +E   K   S IP R++ L    VV  
Sbjct: 252 -------GGFHSIALNKDGAVWIWGGGI-----IEKNGKIDNSYIPVRIRWLN--KVVAI 297

Query: 121 CAGYSHCLVLTSSGVV-TCTHKENGC-GSDPSQG----VQ----SNLVQDSHTTITS--L 168
            AGY H + L   G V    H   G  GS+  +     VQ     N+V  +   + S  L
Sbjct: 298 AAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLLVQVKGLKNVVAVAAGRLHSVAL 357

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
              G ++ WGNN +GQ+G  N++ ++  P +V+ L N  +  IA G +H+  + +    +
Sbjct: 358 TKNGTIWAWGNNAFGQLGRENNSFSLNLPYKVKWLDN--VVAIATGGSHTLAIKRD-GTV 414

Query: 229 YAFGIGSAVQL 239
           +++G  +  QL
Sbjct: 415 WSWGANNKGQL 425



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 128/276 (46%), Gaps = 43/276 (15%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LA+ D G V+ WG +  GQLG  +   K   IP RVKGL  V  V A           
Sbjct: 53  HTLAIKDDGTVWAWGYNGFGQLG--NGTYKDSCIPVRVKGLKDVVAVSA----------- 99

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G +HSLAL   G V+ WG   +GQ   +S   +  + P +VK L   ++V   AG+ 
Sbjct: 100 ---GTFHSLALKKDGSVWIWGHTNYGQ--RKSDVYRDFTTPVKVKELK--NIVAIAAGWD 152

Query: 126 HCLVLTSSGVVTC----THKENGCGS-DPS------QGVQSNLVQDS---HTTITSLNSP 171
             L + S G V       H E G GS  PS      +G++  +   +   H+   +L   
Sbjct: 153 FSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGLKDVVAVSAGLYHS--LALKRD 210

Query: 172 GELYTWGNNEYGQMGIN-NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
           G +++WG NE G++G     + TV+ P RV+ L +  +  I+ G  HS  L+K    ++ 
Sbjct: 211 GTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSD--VIAISAGGFHSIALNKD-GAVWI 267

Query: 231 FGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAG 266
           +G G  ++ +        P  I   W+   VA+ AG
Sbjct: 268 WG-GGIIEKNGKIDNSYIPVRIR--WLNKVVAIAAG 300



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 101/234 (43%), Gaps = 67/234 (28%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADK--KSQSIPKRVKGLASVSVVQACAGYS 59
            G +HSLA+   G V++WG DT+    L++  K       P ++KGL+ V  V A     
Sbjct: 552 AGYFHSLAVRTDGTVWSWG-DTN----LDNKKKYLNFSEKPVKIKGLSGVVKVAA----- 601

Query: 60  HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ 119
                    G +HSLAL   G V++WG + +GQLG  +  +++  +P RVKGL   +VV 
Sbjct: 602 ---------GKYHSLALKKDGTVWSWGYNAYGQLG--NGTRETSFVPVRVKGLN--NVVA 648

Query: 120 ACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGN 179
             AG  H + L   G V                                      + WG+
Sbjct: 649 IAAGDYHSMALKKDGTV--------------------------------------WVWGS 670

Query: 180 NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
           N  GQ+G  N   + T P +VE L N  +  IA G  HS  L K    ++ +GI
Sbjct: 671 NIRGQLGRRNIEFS-TVPLKVEKLDN--VVAIAAGDTHSVALKKD-GTVWVWGI 720



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 22/154 (14%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G +HSLAL   G V++WG + +GQLG  +  +++  +P RVKGL +V  + A       
Sbjct: 601 AGKYHSLALKKDGTVWSWGYNAYGQLG--NGTRETSFVPVRVKGLNNVVAIAA------- 651

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  G +HS+AL   G V+ WG +  GQLG  + +    ++P +V+ L   +VV   
Sbjct: 652 -------GDYHSMALKKDGTVWVWGSNIRGQLGRRNIE--FSTVPLKVEKLD--NVVAIA 700

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQS 155
           AG +H + L   G V     E  C  D S+ + S
Sbjct: 701 AGDTHSVALKKDGTVWVWGIE--CDRDLSKEILS 732



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 129/278 (46%), Gaps = 43/278 (15%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+AL   G ++ WG +  GQLG E+ +  S ++P +VK L +V  +             
Sbjct: 353 HSVALTKNGTIWAWGNNAFGQLGREN-NSFSLNLPYKVKWLDNVVAI------------- 398

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
             TG  H+LA+   G V++WG +  GQLG  +   KS  IP  VKGL +  +V+  AG  
Sbjct: 399 -ATGGSHTLAIKRDGTVWSWGANNKGQLG--NGTYKSSYIPTCVKGLNNAVLVE--AGSQ 453

Query: 126 HCLVLTSSGVV-TCTHKENGCGSDPSQGVQSNL------------VQDSHTTITSLNSPG 172
           H L +   G V      E+      ++ + S L            +      I  L   G
Sbjct: 454 HSLAVDKDGTVWVWGFIESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYILVLRKDG 513

Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
            ++  GN+ Y +   ++S ++VTK  R++++ N  +  IA G  HS  + ++   ++++G
Sbjct: 514 NIWGCGNDFYFRKFTDSSVSSVTKLIRLDNIKN--VRSIAAGYFHSLAV-RTDGTVWSWG 570

Query: 233 IGSAVQLDSPK---SVHKTPQLIHGPWIASPVAMTAGE 267
                 LD+ K   +  + P  I G  ++  V + AG+
Sbjct: 571 ---DTNLDNKKKYLNFSEKPVKIKG--LSGVVKVAAGK 603



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 45/248 (18%)

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V++S  G  H+LA+ D G V+ WG +  GQLG  +   K   IP RVKGL    VV   A
Sbjct: 44  VISSGAGSLHTLAIKDDGTVWAWGYNGFGQLG--NGTYKDSCIPVRVKGLK--DVVAVSA 99

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTIT---------------- 166
           G  H L L   G V         G       +S++ +D  T +                 
Sbjct: 100 GTFHSLALKKDGSVWI------WGHTNYGQRKSDVYRDFTTPVKVKELKNIVAIAAGWDF 153

Query: 167 --SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
             ++ S G ++ WG N +G++GI +   +   P +V+ L +  +  ++ G  HS  L + 
Sbjct: 154 SLAVGSDGSVWAWGINNHGELGIGSLKPSAV-PVKVKGLKD--VVAVSAGLYHSLALKRD 210

Query: 225 VSRLYAFGIGSAVQLDSPKSVHKT---PQLIHGPWIASPVAMTAG--------EDSLVSH 273
              ++++G     +L +  +   T   P  + G  ++  +A++AG        +D  V  
Sbjct: 211 -GTVWSWGYNEDGELGNRPTEDYTVSVPVRVKG--LSDVIAISAGGFHSIALNKDGAVWI 267

Query: 274 SGGLVVKK 281
            GG +++K
Sbjct: 268 WGGGIIEK 275



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 129/295 (43%), Gaps = 70/295 (23%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           TG  H+LA+   G V++WG +  GQLG  +   KS  IP  VKGL +  +V+A       
Sbjct: 400 TGGSHTLAIKRDGTVWSWGANNKGQLG--NGTYKSSYIPTCVKGLNNAVLVEA------- 450

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLES--ADKKSQSI----PKRVKGLASV 115
                  G  HSLA++  G V+ WG        +ES  ++K ++ I    P ++  L  +
Sbjct: 451 -------GSQHSLAVDKDGTVWVWG-------FIESVWSEKNTKDILSPLPIKIGKLNDI 496

Query: 116 SVVQACAGYSHCLVLTSSGVVTCTHKENGCG--------SDPSQGVQSNLVQ-DSHTTIT 166
           +  +   G  + LVL   G +       GCG        +D S    + L++ D+   + 
Sbjct: 497 T--EIAGGLDYILVLRKDGNIW------GCGNDFYFRKFTDSSVSSVTKLIRLDNIKNVR 548

Query: 167 SL----------NSPGELYTWGNNEYGQMGINNSNTTVT---KPQRVESLVNLPIALIAC 213
           S+           + G +++WG+       ++N    +    KP +++ L    +  +A 
Sbjct: 549 SIAAGYFHSLAVRTDGTVWSWGDTN-----LDNKKKYLNFSEKPVKIKGLSG--VVKVAA 601

Query: 214 GANHSFVLSKSVSRLYAFGIGSAVQL-DSPKSVHKTPQLIHGPWIASPVAMTAGE 267
           G  HS  L K    ++++G  +  QL +  +     P  + G  + + VA+ AG+
Sbjct: 602 GKYHSLALKKD-GTVWSWGYNAYGQLGNGTRETSFVPVRVKG--LNNVVAIAAGD 653


>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 3151

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    VVQ   G     
Sbjct: 1412 GSSHSAALTSSGELYTWGLGEYGRLG--HGDTTTQLKPKMVKVLLGHRVVQVACGSRDA- 1468

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 1469 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 1517

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 1518 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 1575

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 1576 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 1628



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 2406 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVGIACG---- 2459

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 2460 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVRVE 2511

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITS 167
             G    + LT +G V    K +    G GSD            QG ++  +         
Sbjct: 2512 CGSQFSVALTKAGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKAIAIATGSLHCVC 2571

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 2572 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 2627



 Score = 83.6 bits (205), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 1359 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 1416

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    VVQ  
Sbjct: 1417 AALTSS------------GELYTWGLGEYGRLG--HGDTTTQLKPKMVKVLLGHRVVQVA 1462

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 1463 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 1522

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 1523 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 1580

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 1581 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 1610



 Score = 70.9 bits (172), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 2253 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALAALRPVQLIGGEQTLFAVT 2309

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 2310 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 2369

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG  S  +     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 2370 SWGEAEDGKLGHGS--RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 2427

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 2428 YGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 2487

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+K+ + +Y +G G   +L      H 
Sbjct: 2488 GGSDGCKV-PMKIDSLTGLGVVRVECGSQFSVALTKAGA-VYTWGKGDYHRLGHGSDDHV 2545

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 2546 RRPRQVQGLQGKKAIAIATG 2565



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 52/209 (24%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  +P++V  L+S  VV+  A +S         G  H+
Sbjct: 1316 GKVYACGEATNGRLGL-GLSSGTVPLPRQVTALSSY-VVKKVAVHS---------GGRHA 1364

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 1365 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 1422

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            G                                      ELYTWG  EYG++G +   TT
Sbjct: 1423 G--------------------------------------ELYTWGLGEYGRLG-HGDTTT 1443

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLS 222
              KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 1444 QLKPKMVKVLLGHRVVQVACGSRDAQTLA 1472



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 1518 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 1575

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 1576 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 1621

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 1622 GSSHSVAWTTVDVAT 1636



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 34/226 (15%)

Query: 91   GQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKENG----- 144
            G++  E  D  +  +P   + L++++VVQ   G      +T  G V  C    NG     
Sbjct: 1273 GRIRAEEEDLAAIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLG 1332

Query: 145  --CGSDP---------SQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
               G+ P         S  V+   V       T+L   G++++WG  + G++G + S   
Sbjct: 1333 LSSGTVPLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMN 1391

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD--------SPKSV 245
              KP+ +E+L    I  IACG++HS  L+ S   LY +G+G   +L          PK V
Sbjct: 1392 CDKPRLIEALKTKRIRDIACGSSHSAALTSS-GELYTWGLGEYGRLGHGDTTTQLKPKMV 1450

Query: 246  -----HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
                 H+  Q+  G   A  +A+T  ++ LV   G     K+  GG
Sbjct: 1451 KVLLGHRVVQVACGSRDAQTLALT--DEGLVFSWGDGDFGKLGRGG 1494


>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
          Length = 4856

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 131/287 (45%), Gaps = 66/287 (22%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 4079 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4136

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + QA     
Sbjct: 4137 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQARNKSI 4182

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
             C V               CG +             HT   S +    ++ +G+ +YG++
Sbjct: 4183 ICSV--------------ACGLN-------------HTLAVSADG-SMVWAFGDGDYGKL 4214

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K   ++Y FG    + L   ++ 
Sbjct: 4215 GLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GQVYTFGQDRLIGLPEGRAR 4272

Query: 246  -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             H  PQ +  P +A                 G+V++ +  G +H++ 
Sbjct: 4273 NHNRPQQV--PVLA-----------------GVVIEDVAVGAEHTLA 4300



 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G SH 
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+            D   V+++GG  +G+LG    D      PK ++ L  + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V       C     GCGS  +  ++  L++             DSH
Sbjct: 621 AGSQSSLSLTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDISIGDSH 676

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E+Y WGNN  GQ G  NS   +TKP++V  L  + I  ++ G +HS  
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQVSAGTSHSLA 732



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 130/302 (43%), Gaps = 54/302 (17%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYSHCLVL 64
           H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV   AGY      
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCVSAGYR----- 521

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
                  HS A+ + GE++TWG    G+LG    D  S++IP  VK +++V  V +C G 
Sbjct: 522 -------HSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GS 570

Query: 125 SHCLVLTSSGVVTCTHKENGCGS---------------DPSQGVQSNLVQDSHTTITSLN 169
           SH + L+  G    +      G                +  QG+    V     +  SL 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLT 630

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           S G++Y WG      +G  +S  T  +P+ +E L    I  I+ G +H   LS   + +Y
Sbjct: 631 STGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHD-NEVY 687

Query: 230 AFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHS 289
           A+G  S  Q     S         GP I  P          VS   G+ ++++ +G  HS
Sbjct: 688 AWGNNSMGQCGQGNST--------GP-ITKP--------KKVSGLDGIAIQQVSAGTSHS 730

Query: 290 IV 291
           + 
Sbjct: 731 LA 732



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 23/258 (8%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + QA    +  +
Sbjct: 4128 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQA---RNKSI 4182

Query: 63   VLTSTTGLWHSLALN-DCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
            + +   GL H+LA++ D   V+ +G   +G+LGL ++  KS   P++V  L  + + +  
Sbjct: 4183 ICSVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKVA 4240

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTITS 167
             G    + LT  G V    ++   G         + P Q     GV    V        +
Sbjct: 4241 CGTQFSVALTKDGQVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLA 4300

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
            L S G++Y WG+N  GQ+G+ ++N  V +P  V  L    +  I+ G  HS   +     
Sbjct: 4301 LTSTGDIYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVP 4359

Query: 228  LYAFGIGSAVQLDSPKSV 245
              A G+   +QL  P +V
Sbjct: 4360 PRAPGVSVPLQLGLPDAV 4377



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 103/239 (43%), Gaps = 55/239 (23%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + +  ++  G V   G  ++G+LGL   D  +QS  K++      S+ +        
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
            V +S     H+LA    GEVF+WG   +G+LG    +  +Q  PK ++G L    VV  
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AGY H   +T  G                                      ELYTWG  
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           ++G++G  +SN+    P  V+ + N  +  ++CG++H+  LSK    +++FG G   +L
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKL 594



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 16/119 (13%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
           G+V+ WG      LG  S++  +   PK ++ LA+  +V    G SHCL           
Sbjct: 633 GQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDISIGDSHCL----------- 678

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 132
            AL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  AG SH L  T+
Sbjct: 679 -ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQVSAGTSHSLAWTA 735



 Score = 44.3 bits (103), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL+   EV+ WG ++ GQ G +       + PK+V GL  +++ Q  AG SH L  T
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQVSAGTSHSLAWT 734

Query: 66  S 66
           +
Sbjct: 735 A 735


>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
           mutus]
          Length = 544

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 101/245 (41%), Gaps = 56/245 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV   A    C 
Sbjct: 153 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQSKVVVNIACGQMC- 209

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ + GEVF WG + +GQLGL S+   +Q  P RV  L  + V +   
Sbjct: 210 ----------SMAVVNTGEVFVWGYNGNGQLGLGSSG--NQPTPCRVAALQGIRVQRVAC 257

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT  G                                      ++Y WG N Y
Sbjct: 258 GYAHTLVLTDEG--------------------------------------QVYAWGANSY 279

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G      +  
Sbjct: 280 GQLGTGNKSNQSYPTPVVVEK--DRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTL 337

Query: 242 PKSVH 246
           P   H
Sbjct: 338 PHLTH 342



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L+   +  AC  Y           
Sbjct: 56  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGKKI--ACLSY----------- 98

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE++TWG+N Y Q+G   +N  + 
Sbjct: 99  ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNAGLV 134

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  + ++  P+ + G
Sbjct: 135 PYHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG 193


>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
          Length = 551

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 102/245 (41%), Gaps = 56/245 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     V           
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKV----------- 206

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V+  + G   S+A+ D GEV+ WG + +GQLGL S+   +Q  P RV  L  + V +   
Sbjct: 207 VMNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSG--NQPTPCRVAALQGIRVQRVAC 264

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 265 GYAHTLVLTDE--------------------------------------GQIYAWGANSY 286

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G      +  
Sbjct: 287 GQLGTGNKSNQSYPTPVVVEK--DRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 344

Query: 242 PKSVH 246
           P   H
Sbjct: 345 PHHTH 349



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 126/288 (43%), Gaps = 38/288 (13%)

Query: 10  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTG 69
           +ND  E+F  G +  G LG+   D +S   P+R+  L    +     G    +VL +T G
Sbjct: 63  VND--EIFVLGTNCSGCLGV--GDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDG 118

Query: 70  LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHCL 128
                      EVFTWG + + QLG  +       +P  +   L++  V++   G  H L
Sbjct: 119 -----------EVFTWGHNAYSQLG--NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSL 165

Query: 129 VLTSSGVVTCTHKEN----GCGSDPSQGV--------QSNLVQD---SHTTITSLNSPGE 173
           VLTS G V      N    G GS  +Q +        Q+ +V +         ++   GE
Sbjct: 166 VLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGE 225

Query: 174 LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
           +Y WG N  GQ+G+ +S    T P RV +L  + +  +ACG  H+ VL+    ++YA+G 
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQPT-PCRVAALQGIRVQRVACGYAHTLVLTDE-GQIYAWGA 283

Query: 234 GSAVQLDSPKSVHK---TPQLIHGPWIASPVAMTAGEDSLVSHSGGLV 278
            S  QL +    ++   TP ++    I    A  +   S     GG V
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHV 331


>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Gorilla gorilla gorilla]
          Length = 4586

 Score = 96.7 bits (239), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 2859 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 2915

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 2916 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 2964

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 2965 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3022

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3023 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3075



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 3850 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 3903

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 3904 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 3955

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 3956 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4015

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4016 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4071



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 2806 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 2863

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 2864 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 2909

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 2910 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 2969

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 2970 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3027

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3028 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3057



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 2763 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 2811

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 2812 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 2869

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 2870 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 2928

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 2929 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 2986

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 2987 FRLGHGSDVHVRKPQVVEG 3005



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 113/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG     +LG         ++P +  K +++ S  QA     H    
Sbjct: 483 HYLALAATGEVYSWGCGDGRRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 533

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 534 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 585

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 586 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 613

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 614 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 671

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 672 EHVRYPKLLEG 682



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 131/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G    L +T
Sbjct: 3697 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLLAVT 3753

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 3754 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3813

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 3814 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 3871

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 3872 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 3931

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 3932 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 3989

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 3990 RRPRQVQGLQGKKVIAIATG 4009



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 29/230 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 536 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 588

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 589 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 641

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 642 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 701

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   S
Sbjct: 702 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQS 750



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2712 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 2762

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 2763 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 2816

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 2817 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 2870

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 2871 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2919



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2690 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2745

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2746 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 2805

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 2806 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 2864

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 2865 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 2921

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 2922 DEGLVFSWGDGDFGKLGRGG 2941



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 2965 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3022

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3023 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3068

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3069 GSSHSVAWTTVDVAT 3083



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 51/218 (23%)

Query: 39  IPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESA 98
           +P+ V+GLAS +VV+          + + +   H LAL   GEV++WG     +LG    
Sbjct: 460 VPQLVQGLASRNVVK----------IAAHSDGHHYLALAATGEVYSWGCGDGRRLG---- 505

Query: 99  DKKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNL 157
                ++P +  K +++ S  QA     H                  CGS          
Sbjct: 506 --HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS---------- 537

Query: 158 VQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANH 217
                T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  
Sbjct: 538 -----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGD 591

Query: 218 SFVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
           +  L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 592 AQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 629


>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
            mulatta]
          Length = 4840

 Score = 96.7 bits (239), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3163

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3164 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3212

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3213 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3270

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3271 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4129 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 4182

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4183 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4234

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4235 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4294

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4295 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4350



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3111

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3112 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3157

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3275

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3276 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3305



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 556

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 557 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 608

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 609 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 636

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 637 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 694

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 695 EHVRYPKLLEG 705



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3011 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3059

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3117

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3118 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3176

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3177 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3234

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3235 FRLGHGSDVHVRKPQVVEG 3253



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 611

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 612 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 664

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 725 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3976 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4032

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4033 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4092

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 4093 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4150

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4151 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4210

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4211 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4268

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4269 RRPRQVQGLQGKKVIAIATG 4288



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3010

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3011 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3064

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3065 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3118

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3119 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2938 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2993

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2994 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3112

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3113 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3169

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3170 DEGLVFSWGDGDFGKLGRGG 3189



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3213 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3270

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3271 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3316

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3317 GSSHSVAWTTVDVAT 3331



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 484 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 528

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 529 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 560

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 561 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 615

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 616 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 652


>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
          Length = 4836

 Score = 96.7 bits (239), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3164

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3165 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3213

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3271

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3272 AVTDAGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score = 90.5 bits (223), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 108/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4100 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDVACG---- 4153

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4154 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4205

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4206 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
             +  GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4266 CSEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4321



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3112

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3113 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3158

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ + 
Sbjct: 3219 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA- 3276

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3277 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3306



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 557

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 558 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 609

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 610 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 637

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 638 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 695

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 696 EHVRYPKLLEG 706



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3012 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3060

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3118

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3119 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3177

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3178 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3235

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3236 FRLGHGSDVHVRKPQVVEG 3254



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 612

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 665

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 129/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALAALRPVQLIGGEQTLFAVT 4003

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4004 ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4063

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L    VV   AG +H   +T++G + T     
Sbjct: 4064 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGR 4121

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4122 YGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4181

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4182 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4239

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4240 RRPRQVQGLQGKKVIAIATG 4259



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3011

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3012 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3065

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3066 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3119

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3120 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2939 GNSGSLIRRKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2994

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3113

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3114 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3170

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3171 DEGLVFSWGDGDFGKLGRGG 3190



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3271

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3272 AVT------------DAGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3317

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3318 GSSHSVAWTTVDVAT 3332



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 485 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 529

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 530 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 561

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 562 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 616

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 653


>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Nomascus leucogenys]
          Length = 4530

 Score = 96.7 bits (239), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 2803 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 2859

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 2860 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 2908

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 2909 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 2966

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 2967 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3019



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 3794 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 3847

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 3848 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 3899

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 3900 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3959

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 3960 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4015



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 2750 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 2807

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 2808 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 2853

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 2854 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 2913

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 2914 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 2971

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 2972 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3001



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 2707 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 2755

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 2756 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 2813

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 2814 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 2872

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 2873 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 2930

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 2931 FRLGHGSDVHVRKPQVVEG 2949



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3641 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 3697

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 3698 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3757

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 3758 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 3815

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 3816 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 3875

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 3876 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 3933

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 3934 RRPRQVQGLQGKKVIAIATG 3953



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2656 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 2706

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 2707 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 2760

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 2761 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 2814

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 2815 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2863



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2634 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2689

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2690 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 2749

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 2750 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 2808

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 2809 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 2865

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 2866 DEGLVFSWGDGDFGKLGRGG 2885



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 2909 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 2966

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 2967 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3012

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3013 GSSHSVAWTTVDVAT 3027



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 49/184 (26%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 439 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 483

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 484 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 515

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 516 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 570

Query: 219 FVLS 222
             L+
Sbjct: 571 QTLA 574



 Score = 48.5 bits (114), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 14/127 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 461 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 511

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G 
Sbjct: 512 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACGS 567

Query: 125 SHCLVLT 131
                L 
Sbjct: 568 GDAQTLA 574


>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Ailuropoda melanoleuca]
          Length = 4837

 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3164

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3165 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3213

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3271

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3272 AVTDAGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4101 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDVACG---- 4154

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4155 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4206

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4207 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4266

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4267 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4322



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3112

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3113 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3158

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ + 
Sbjct: 3219 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA- 3276

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3277 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3306



 Score = 77.4 bits (189), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 557

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 558 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 609

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 610 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 637

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 638 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 695

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 696 EHVRYPKLLEG 706



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3012 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3060

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3118

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3119 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3177

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3178 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3235

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3236 FRLGHGSDVHVRKPQVVEG 3254



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 612

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 665

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4004

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4005 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4064

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 4065 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4122

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4123 YGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4182

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4183 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4240

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4241 RRPRQVQGLQGKKVIAIATG 4260



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3011

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3012 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3065

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3066 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3119

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3120 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2939 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2994

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3113

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3114 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3170

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3171 DEGLVFSWGDGDFGKLGRGG 3190



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3271

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3272 AVT------------DAGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3317

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3318 GSSHSVAWTTVDVAT 3332



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++++          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 485 PQLVQGLASRNIIK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 529

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 530 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 561

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 562 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 616

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 653


>gi|296412864|ref|XP_002836139.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629946|emb|CAZ80330.1| unnamed protein product [Tuber melanosporum]
          Length = 1545

 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 142/303 (46%), Gaps = 54/303 (17%)

Query: 815  NWYLLMSDDYFERLILIFKQCLIY-LLQQPGVVDS--------TNGDITFNR--KLSFCL 863
            +W+  M +  F RLI +    + Y L +Q G   S          G +++N   ++    
Sbjct: 992  SWFTRMPETQFRRLIELVGSFITYRLTRQEGRKRSHAGGSAASAGGRLSYNDDWQIRAAA 1051

Query: 864  QVLQKLNSLNNETLTSSISAGGRTVSN---------------IRTPAPHGGRKVAYTAFY 908
            +V+    S NN T      AG R +                  R  A   G+ +  + FY
Sbjct: 1052 RVMSLFFSANNNT------AGRRGLQGSSYDTADDNLNYGQIARREARRRGQIIPTSEFY 1105

Query: 909  MPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQ 968
               L    D+  D+  W S     ++R   C YPF+    AK ++LE D + QME    Q
Sbjct: 1106 NM-LLDYQDLIADFDVWESR----ASRFCFCQYPFLLSMGAKISILEHDAKRQME---VQ 1157

Query: 969  TNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQY--TTNDFKKPLKVNDTSPIYL 1026
                 F    +  T+NQYL ++V R+ +VED+++ +++   + +D KK L++        
Sbjct: 1158 ARHAFFNSIASRRTINQYLVLKVRRECLVEDSLKGISEGVGSLDDIKKGLRI-------- 1209

Query: 1027 APQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYF 1086
                +F GE+  DAGG+++E+ +L+ +++ DP YGMF   ++++  +F+ ++ E    +F
Sbjct: 1210 ----EFIGEDGVDAGGLKKEWFLLVARDVFDPSYGMFVYDDDSQYCYFNPNSLESSEEFF 1265

Query: 1087 LIG 1089
            L+G
Sbjct: 1266 LVG 1268



 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 17/106 (16%)

Query: 720  YGITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILD--- 775
            YG+  Y++ ++  +F+ ++ E     FL+G L GLAIYN TI+++  P  ++KK+L    
Sbjct: 1239 YGMFVYDDDSQYCYFNPNSLESSEEFFLVGVLFGLAIYNSTILDVALPPYIFKKLLHFTV 1298

Query: 776  ---------EPILLQDLKDLS---PTLAKSLQDILDYREPDLEDVF 809
                      P L   L+DL+   P+LA  L+ +L++ E D+E  F
Sbjct: 1299 PHSLAVSSIRPPLHHTLEDLAVFRPSLAHGLRQLLEF-EGDVESTF 1343


>gi|307193358|gb|EFN76220.1| Ubiquitin-protein ligase E3A [Harpegnathos saltator]
          Length = 840

 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 95/193 (49%), Gaps = 26/193 (13%)

Query: 902  VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQ 961
            + +T FY   L+   ++  D+  + S  P   +     NY FI     KT  L  D RI+
Sbjct: 409  IPFTDFYNEPLSDAIEMDKDFAYYKSEEPMKFS---FMNYAFILTPATKTLGLYYDNRIR 465

Query: 962  M--EHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIREL---AQYTTNDFKKPL 1016
            M  E  M+      FLQT      N YL ++V RD++++D + EL   A    +D KK L
Sbjct: 466  MYSERRMS------FLQTVVGQPTNPYLRLKVRRDHLIDDALVELEMVAMENPSDLKKQL 519

Query: 1017 KVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSE 1076
             V            +F GE+  D GGV +EF  L+++EI +P YGMF   E+T+  WF+ 
Sbjct: 520  VV------------EFEGEQGVDEGGVSKEFFQLVVEEIFNPDYGMFTSQEDTQMTWFNP 567

Query: 1077 DTFEDQNMYFLIG 1089
             +FE    + LIG
Sbjct: 568  TSFESDAQFTLIG 580



 Score = 77.4 bits (189), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 62/99 (62%), Gaps = 1/99 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T  E+T+  WF+  +FE      LIG + GLAIYN  I+++ FP+ +Y+K+L    
Sbjct: 551 YGMFTSQEDTQMTWFNPTSFESDAQFTLIGIVLGLAIYNNVILDVRFPMVVYRKLLGRKG 610

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
              DL+D SPTL ++++++++Y   D+ + F  TFR  Y
Sbjct: 611 AFADLEDWSPTLYRTMRELMEYTGDDMPETFMQTFRVAY 649


>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
          Length = 4814

 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3085 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3141

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3142 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3190

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3191 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3248

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3249 AVTDAGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3301



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4078 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDVACG---- 4131

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4132 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4183

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4184 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4243

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4244 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4299



 Score = 82.4 bits (202), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3032 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3089

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3090 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3135

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3136 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3195

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ + 
Sbjct: 3196 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA- 3253

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3254 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3283



 Score = 77.4 bits (189), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 484 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 534

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 535 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 586

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 587 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 614

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 615 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 672

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 673 EHVRYPKLLEG 683



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 2989 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3037

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3038 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3095

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3096 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3154

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3155 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3212

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3213 FRLGHGSDVHVRKPQVVEG 3231



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 537 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 589

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 590 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 642

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 643 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 702

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 703 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 755



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3925 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 3981

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 3982 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4041

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 4042 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4099

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4100 YGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4159

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4160 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4217

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4218 RRPRQVQGLQGKKVIAIATG 4237



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2938 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 2988

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 2989 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3042

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3043 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3096

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3097 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3145



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2916 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2971

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2972 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3031

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3032 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3090

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3091 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3147

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3148 DEGLVFSWGDGDFGKLGRGG 3167



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3191 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3248

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3249 AVT------------DAGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3294

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3295 GSSHSVAWTTVDVAT 3309



 Score = 53.9 bits (128), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++++          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 462 PQLVQGLASRNIIK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 506

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 507 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 538

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 539 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 593

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 594 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 630


>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 3894

 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 110/234 (47%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +Q  PK +K L    +VQ   G     
Sbjct: 2202 GSSHSAAITSSGELYTWGLGEYGRLG--HGDNITQLKPKLIKSLVGHRIVQVACGSRDA- 2258

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP  ++ L ++ VVQ   
Sbjct: 2259 ---------QTLALTDEGWVFSWGDGDFGKLG--RGGSEGCNIPHNIERLNALEVVQIEC 2307

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDS-------HTTITSLN-- 169
            G    L LT +G V    K +    G GSD  Q V+   V +S       H  + +L+  
Sbjct: 2308 GAQFSLALTKTGEVWTWGKGDYFRLGHGSD--QHVRKPTVIESLKDKKVIHVAVGALHCL 2365

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N +     KP  V  L ++ I  +ACG++HS  
Sbjct: 2366 AVTDTGQVYAWGDNDHGQQG-NGTTIVNRKPALVHGLEDVHINRVACGSSHSIA 2418



 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   G+++TWG   +G+LG    D + Q  PK ++ L    V+    G     
Sbjct: 3178 GGAHSAAITSTGQLYTWGKGRYGRLG--HGDSEDQLKPKLIEELVGYKVIDVACG----- 3230

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L + D   V++WG   +G+LG   +D     +PK+++ LA + V++   
Sbjct: 3231 -----SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD--GCKVPKKIESLAGLGVIKVEC 3283

Query: 123  GYSHCLVLTSSGVV--------------TCTHKENGCGSDPSQGVQSNLVQDSHTTITSL 168
            G    + LT SG V              T  H          QG +   +        + 
Sbjct: 3284 GSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVAC 3343

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            +  GE++TWG+N+ GQ+G + +N  + +P+ V +L    I  +ACG+ H+   S
Sbjct: 3344 SDEGEVFTWGDNDEGQLGDDTTN-AIQRPRLVSALQGKKITNVACGSAHTLAWS 3396



 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 124/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++AL   G+VF+WG    G+LG    ++ +   PK ++ L S  +     G SH 
Sbjct: 2149 SGGKHAMALTLDGKVFSWGEGEDGKLG--HGNRLNLDKPKMIEALRSKKIRDIACGSSHS 2206

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE++TWG   +G+LG    D  +Q  PK +K L    +VQ  
Sbjct: 2207 AAITSS------------GELYTWGLGEYGRLG--HGDNITQLKPKLIKSLVGHRIVQVA 2252

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G V      +    G G      +  N+ + +   +          
Sbjct: 2253 CGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFS 2312

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   GE++TWG  +Y ++G + S+  V KP  +ESL +  +  +A GA H   ++ + 
Sbjct: 2313 LALTKTGEVWTWGKGDYFRLG-HGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDT- 2370

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +    V++ P L+HG
Sbjct: 2371 GQVYAWGDNDHGQQGNGTTIVNRKPALVHG 2400



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 126/303 (41%), Gaps = 64/303 (21%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H LAL+   +V++WG    G+LG    ++ +   PK ++ L    ++    G +H 
Sbjct: 3125 SGGKHCLALSADNDVYSWGEGDDGKLG--HGNRLACETPKLIEALQGYEIIDIACGGAHS 3182

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TST            G+++TWG   +G+LG    D + Q  PK ++ L    V+   
Sbjct: 3183 AAITST------------GQLYTWGKGRYGRLG--HGDSEDQLKPKLIEELVGYKVIDV- 3227

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
                                   CGS  +Q +              +     +++WG+ +
Sbjct: 3228 ----------------------ACGSGDAQTL-------------CITDDDNVWSWGDGD 3252

Query: 182  YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
            YG++G   S+     P+++ESL  L +  + CG+  S  L++S S +Y +G G   +L  
Sbjct: 3253 YGKLGRGGSDGCKV-PKKIESLAGLGVIKVECGSQFSVALTRSGS-VYTWGKGDYHRLG- 3309

Query: 242  PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVL 301
                H T + +  P     VA   G+  +   +G L        G+  + T   + +G L
Sbjct: 3310 ----HGTGEHVRRP---KKVAALQGKKIISIATGSLHCVACSDEGE--VFTWGDNDEGQL 3360

Query: 302  SDD 304
             DD
Sbjct: 3361 GDD 3363



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 55/210 (26%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSTTGLWH 72
            G+++  G  T+G+LGL      S ++P  R     S  V++  A +S         G  H
Sbjct: 2107 GKLYACGEGTNGRLGL----GHSNNVPYPRPIPFLSQYVIKKVAVHS---------GGKH 2153

Query: 73   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 132
            ++AL   G+VF+WG    G+LG    ++ +   PK ++ L S  +     G SH   +TS
Sbjct: 2154 AMALTLDGKVFSWGEGEDGKLG--HGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITS 2211

Query: 133  SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNT 192
            SG                                      ELYTWG  EYG++G +  N 
Sbjct: 2212 SG--------------------------------------ELYTWGLGEYGRLG-HGDNI 2232

Query: 193  TVTKPQRVESLVNLPIALIACGANHSFVLS 222
            T  KP+ ++SLV   I  +ACG+  +  L+
Sbjct: 2233 TQLKPKLIKSLVGHRIVQVACGSRDAQTLA 2262



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 16/127 (12%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S+AL   G V+TWG   + +LG  + +   +  PK+V  L    ++    G  HC+    
Sbjct: 3288 SVALTRSGSVYTWGKGDYHRLGHGTGEHVRR--PKKVAALQGKKIISIATGSLHCV---- 3341

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
                    A +D GEVFTWG +  GQLG ++ +   +  P+ V  L    +     G +H
Sbjct: 3342 --------ACSDEGEVFTWGDNDEGQLGDDTTNAIQR--PRLVSALQGKKITNVACGSAH 3391

Query: 127  CLVLTSS 133
             L  +++
Sbjct: 3392 TLAWSTN 3398



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 57/129 (44%), Gaps = 16/129 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   GEV+TWG   + +LG   +D+  +  P  ++ L    V+    G  HCL
Sbjct: 2308 GAQFSLALTKTGEVWTWGKGDYFRLG-HGSDQHVRK-PTVIESLKDKKVIHVAVGALHCL 2365

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V GL  V + +   
Sbjct: 2366 AVT------------DTGQVYAWGDNDHGQQG--NGTTIVNRKPALVHGLEDVHINRVAC 2411

Query: 123  GYSHCLVLT 131
            G SH +  T
Sbjct: 2412 GSSHSIAWT 2420



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/258 (21%), Positives = 94/258 (36%), Gaps = 87/258 (33%)

Query: 7    SLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQLG +E A  K   IP   + L+++  VQ   G      +T
Sbjct: 3024 TLSWGGSGTIYGWGHNHRGQLGGIEGAKVK---IPTPCEALSTLRPVQLVGGEQTLFAVT 3080

Query: 66   S------------------------------------------TTGLWHSLALNDCGEVF 83
            +                                           +G  H LAL+   +V+
Sbjct: 3081 ADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVY 3140

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
            +WG    G+LG    ++ +   PK ++ L    ++    G +H   +TS+G         
Sbjct: 3141 SWGEGDDGKLG--HGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTG--------- 3189

Query: 144  GCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESL 203
                                         +LYTWG   YG++G  +S   + KP+ +E L
Sbjct: 3190 -----------------------------QLYTWGKGRYGRLGHGDSEDQL-KPKLIEEL 3219

Query: 204  VNLPIALIACGANHSFVL 221
            V   +  +ACG+  +  L
Sbjct: 3220 VGYKVIDVACGSGDAQTL 3237



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 21/189 (11%)

Query: 81   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCT 139
             VF WG +   QLG     K    +P +   L+ +  +    G     +++  G +  C 
Sbjct: 2056 RVFVWGLNDKDQLGGMKGSKVK--LPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACG 2113

Query: 140  HKENG-CGSDPSQGV--------------QSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
               NG  G   S  V              +   V        +L   G++++WG  E G+
Sbjct: 2114 EGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGK 2173

Query: 185  MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
            +G  N    + KP+ +E+L +  I  IACG++HS  ++ S   LY +G+G   +L    +
Sbjct: 2174 LGHGN-RLNLDKPKMIEALRSKKIRDIACGSSHSAAITSS-GELYTWGLGEYGRLGHGDN 2231

Query: 245  VHK-TPQLI 252
            + +  P+LI
Sbjct: 2232 ITQLKPKLI 2240



 Score = 43.5 bits (101), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            TG  H +A +D GEVFTWG +  GQLG ++ +   +  P+ V  L    +     G +H 
Sbjct: 3335 TGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQR--PRLVSALQGKKITNVACGSAHT 3392

Query: 62   LVLTSTTG 69
            L  ++   
Sbjct: 3393 LAWSTNNA 3400


>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
          Length = 621

 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 99/231 (42%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV   A    C 
Sbjct: 230 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVVNIACGQMC- 286

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ D GEV+ WG + +GQLGL S+   +QS P R+  L  + V +   
Sbjct: 287 ----------SVAVVDNGEVYVWGYNGNGQLGLGSSG--NQSTPCRIAALQGICVQRVAC 334

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 335 GYAHTLVLTDE--------------------------------------GQVYVWGANSY 356

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 357 GQLGTGNKSNQSYPTPVAVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 405



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 109/269 (40%), Gaps = 59/269 (21%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHCLVLTSTTGLWH 72
           GE+FTWG + + QLG  +       +P  +   L++  V++   G  H LVLTS      
Sbjct: 188 GEIFTWGHNAYSQLG--NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD----- 240

Query: 73  SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 132
                  GEVF WG +  GQ+G  S    +Q IP+RV G     VV   A          
Sbjct: 241 -------GEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVVNIA---------- 281

Query: 133 SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNT 192
                       CG   S  V  N               GE+Y WG N  GQ+G+ +S  
Sbjct: 282 ------------CGQMCSVAVVDN---------------GEVYVWGYNGNGQLGLGSSGN 314

Query: 193 TVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK---TP 249
             T P R+ +L  + +  +ACG  H+ VL+    ++Y +G  S  QL +    ++   TP
Sbjct: 315 QST-PCRIAALQGICVQRVACGYAHTLVLTDE-GQVYVWGANSYGQLGTGNKSNQSYPTP 372

Query: 250 QLIHGPWIASPVAMTAGEDSLVSHSGGLV 278
             +    I    A  +   S     GG V
Sbjct: 373 VAVEKDRIIEIAACHSTHTSAAKTQGGHV 401


>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Metaseiulus occidentalis]
          Length = 4496

 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 110/237 (46%), Gaps = 33/237 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D   Q  PK+V+ L+   VVQ   G     
Sbjct: 2799 GSSHSAAVTSSGELYTWGSGEYGRLG--HGDNVPQLKPKQVRALSHERVVQVACGSRDAQ 2856

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             L  T   W          V++WG    G+LG   +D    S+P+ V+ L S  V+Q   
Sbjct: 2857 TLALTERHW----------VYSWGDGDFGKLGKGGSD--GSSLPQNVETLNSQQVIQVEC 2904

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDP--------SQGVQSNLVQDSHTTI--TSL 168
            G    L L+ +G V    K +    G GSD          +    N++Q S   +   ++
Sbjct: 2905 GAQFSLALSKNGKVWTWGKGDYFRLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAV 2964

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVT-KPQRVESLVNLPIALIACGANHSFVLSKS 224
               GE+Y WG+N++GQ G  N NTTV  KP  V  L    I  +ACG++HS   S +
Sbjct: 2965 TDRGEVYAWGDNDHGQQG--NGNTTVNRKPAIVRGLE--AITNVACGSSHSVAWSST 3017



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 115/239 (48%), Gaps = 30/239 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   GE++TWG   +G+LG    D + Q  PK+V+ LA  +V+    G     
Sbjct: 3766 GGAHSACITASGELYTWGKGRYGRLG--HGDSEDQLKPKKVEELAGHNVLDVACG----- 3818

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L ++  G V++WG   +G+LG   +D      P+++  L +  V++   
Sbjct: 3819 -----SGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSD--GCKFPQKIDSLQNAGVIKVEC 3871

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDPS----QGVQSNLVQDS--HTTITSLN--- 169
            G    + LT++GVV    K +    G GS+      Q VQ  L         + SL+   
Sbjct: 3872 GSQFSVALTAAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVA 3931

Query: 170  --SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
                GE++TWG+N+ GQ+G + S   + +P+ V SL    +  +ACG+ H+   S S S
Sbjct: 3932 CTDSGEVFTWGDNDEGQLG-DGSTNAIQRPKLVASLKGKKMNRVACGSAHTVSWSTSKS 3989



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+LAL   G VF+WG    G+LG    +K S   PK V+ L    +     G SH 
Sbjct: 2746 SGGRHALALTIDGRVFSWGEGEDGKLG--HGNKISYDRPKLVESLKCKRIRDVACGSSHS 2803

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE++TWG   +G+LG    D   Q  PK+V+ L+   VVQ  
Sbjct: 2804 AAVTSS------------GELYTWGSGEYGRLG--HGDNVPQLKPKQVRALSHERVVQVA 2849

Query: 122  AGY--SHCLVLTSSGVVTCT-----HKENGCGSDPSQGVQSNLVQDSHTTIT-------- 166
             G   +  L LT    V         K    GSD S   Q+    +S   I         
Sbjct: 2850 CGSRDAQTLALTERHWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFS 2909

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L+  G+++TWG  +Y ++G + S++ V  PQ VE L +  +  ++ GA H   ++   
Sbjct: 2910 LALSKNGKVWTWGKGDYFRLG-HGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTDR- 2967

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
              +YA+G      Q +   +V++ P ++ G
Sbjct: 2968 GEVYAWGDNDHGQQGNGNTTVNRKPAIVRG 2997



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 111/254 (43%), Gaps = 55/254 (21%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H LAL   G+VF+WG    G+LG  S  K     PK ++ L    VV    G +H 
Sbjct: 3713 SGGKHCLALTSSGDVFSWGEGDDGKLGHGS--KALCERPKLIESLRDKHVVSVACGGAHS 3770

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +T++            GE++TWG   +G+LG    D + Q  PK+V+ LA  +V+   
Sbjct: 3771 ACITAS------------GELYTWGKGRYGRLG--HGDSEDQLKPKKVEELAGHNVLDV- 3815

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
                                   CGS            D+ T   S +  G +++WG+ +
Sbjct: 3816 ----------------------ACGSG-----------DAQTLCVSRD--GLVWSWGDGD 3840

Query: 182  YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
            YG++G   S+     PQ+++SL N  +  + CG+  S  L+ +   +Y +G G   +L  
Sbjct: 3841 YGKLGRGGSD-GCKFPQKIDSLQNAGVIKVECGSQFSVALT-AAGVVYTWGKGDYHRLGH 3898

Query: 242  PKSVH-KTPQLIHG 254
                H + PQ + G
Sbjct: 3899 GSEDHVRRPQAVQG 3912



 Score = 77.4 bits (189), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 118/257 (45%), Gaps = 33/257 (12%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+VF  G  T+G+LGL  +   +Q  PK +  L S   ++  A +S         G  H+
Sbjct: 2704 GKVFACGEGTNGRLGLGHSHNVAQ--PKPLTDL-SPYFIKKVAVHS---------GGRHA 2751

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL   G VF+WG    G+LG    +K S   PK V+ L    +     G SH   +TSS
Sbjct: 2752 LALTIDGRVFSWGEGEDGKLG--HGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVTSS 2809

Query: 134  GVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTIT------------SLNSPGELYTW 177
            G +    +  +   G G +  Q     +   SH  +             +L     +Y+W
Sbjct: 2810 GELYTWGSGEYGRLGHGDNVPQLKPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSW 2869

Query: 178  GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
            G+ ++G++G   S+ + + PQ VE+L +  +  + CGA  S  LSK+  +++ +G G   
Sbjct: 2870 GDGDFGKLGKGGSDGS-SLPQNVETLNSQQVIQVECGAQFSLALSKN-GKVWTWGKGDYF 2927

Query: 238  QLDSPKSVH-KTPQLIH 253
            +L      H + PQ++ 
Sbjct: 2928 RLGHGSDSHVRWPQVVE 2944



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 122/307 (39%), Gaps = 45/307 (14%)

Query: 7    SLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G +  WG +  GQLG +E A  K+ +I      L ++  VQ   G      LT
Sbjct: 3612 TLSWGGSGVIHGWGHNHRGQLGGVEGAKVKTATI---CDALTALRPVQIVGGEQTLFALT 3668

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC--AG 123
            S             G+V+  G        L     +S S P  ++ L  V V Q    +G
Sbjct: 3669 SD------------GKVYATG--YGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSG 3714

Query: 124  YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN-------------- 169
              HCL LTSSG V       G G D   G  S  + +    I SL               
Sbjct: 3715 GKHCLALTSSGDVFSW----GEGDDGKLGHGSKALCERPKLIESLRDKHVVSVACGGAHS 3770

Query: 170  ----SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
                + GELYTWG   YG++G  +S   + KP++VE L    +  +ACG+  +  L  S 
Sbjct: 3771 ACITASGELYTWGKGRYGRLGHGDSEDQL-KPKKVEELAGHNVLDVACGSGDAQTLCVSR 3829

Query: 226  SRL-YAFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
              L +++G G   +L    S   K PQ I     A  + +  G    V+ +   VV    
Sbjct: 3830 DGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWG 3889

Query: 284  SGGDHSI 290
             G  H +
Sbjct: 3890 KGDYHRL 3896



 Score = 61.6 bits (148), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 18/133 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL+  G+V+TWG   + +LG   +D   +  P+ V+ LA  +V+Q   G  HC+
Sbjct: 2905 GAQFSLALSKNGKVWTWGKGDYFRLG-HGSDSHVR-WPQVVEELADKNVIQVSVGALHCI 2962

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D GEV+ WG + HGQ G  + +      P  V+GL +++ V AC 
Sbjct: 2963 AVT------------DRGEVYAWGDNDHGQQG--NGNTTVNRKPAIVRGLEAITNV-AC- 3006

Query: 123  GYSHCLVLTSSGV 135
            G SH +  +S+G 
Sbjct: 3007 GSSHSVAWSSTGT 3019


>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
 gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
           domain containing protein 2 [Bos taurus]
          Length = 527

 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 101/245 (41%), Gaps = 56/245 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV   A    C 
Sbjct: 136 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQSKVVVNIACGQMC- 192

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ + GEVF WG + +GQLGL S+   +Q  P RV  L  + V +   
Sbjct: 193 ----------SMAVVNTGEVFVWGYNGNGQLGLGSSG--NQPTPCRVAALQGIRVQRVAC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT  G                                      ++Y WG N Y
Sbjct: 241 GYAHTLVLTDEG--------------------------------------QVYAWGANSY 262

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G      +  
Sbjct: 263 GQLGTGNKSNQSYPTPVVVEK--DRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTL 320

Query: 242 PKSVH 246
           P   H
Sbjct: 321 PHLTH 325



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L+   +  AC  Y           
Sbjct: 39  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGKKI--ACLSY----------- 81

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE++TWG+N Y Q+G   +N  + 
Sbjct: 82  ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNAGLV 117

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  + ++  P+ + G
Sbjct: 118 PYHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG 176


>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
          Length = 4733

 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 110/234 (47%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +Q  PK +K L    +VQ   G     
Sbjct: 3041 GSSHSAAITSSGELYTWGLGEYGRLG--HGDNITQLKPKLIKSLVGHRIVQVACGSRDA- 3097

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP  ++ L ++ VVQ   
Sbjct: 3098 ---------QTLALTDEGWVFSWGDGDFGKLG--RGGSEGCNIPHNIERLNALEVVQIEC 3146

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDS-------HTTITSLN-- 169
            G    L LT +G V    K +    G GSD  Q V+   V +S       H  + +L+  
Sbjct: 3147 GAQFSLALTKTGEVWTWGKGDYFRLGHGSD--QHVRKPTVIESLKDKKVIHVAVGALHCL 3204

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N +     KP  V  L ++ I  +ACG++HS  
Sbjct: 3205 AVTDTGQVYAWGDNDHGQQG-NGTTIVNRKPALVHGLEDVHINRVACGSSHSIA 3257



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   G+++TWG   +G+LG    D + Q  PK ++ L    V+    G     
Sbjct: 4017 GGAHSAAITSTGQLYTWGKGRYGRLG--HGDSEDQLKPKLIEELVGYKVIDVACG----- 4069

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L + D   V++WG   +G+LG   +D     +PK+++ LA + V++   
Sbjct: 4070 -----SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD--GCKVPKKIESLAGLGVIKVEC 4122

Query: 123  GYSHCLVLTSSGVV--------------TCTHKENGCGSDPSQGVQSNLVQDSHTTITSL 168
            G    + LT SG V              T  H          QG +   +        + 
Sbjct: 4123 GSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVAC 4182

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            +  GE++TWG+N+ GQ+G + +N  + +P+ V +L    I  +ACG+ H+   S
Sbjct: 4183 SDEGEVFTWGDNDEGQLGDDTTN-AIQRPRLVSALQGKKITNVACGSAHTLAWS 4235



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 124/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++AL   G+VF+WG    G+LG    ++ +   PK ++ L S  +     G SH 
Sbjct: 2988 SGGKHAMALTLDGKVFSWGEGEDGKLG--HGNRLNLDKPKMIEALRSKKIRDIACGSSHS 3045

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE++TWG   +G+LG    D  +Q  PK +K L    +VQ  
Sbjct: 3046 AAITSS------------GELYTWGLGEYGRLG--HGDNITQLKPKLIKSLVGHRIVQVA 3091

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G V      +    G G      +  N+ + +   +          
Sbjct: 3092 CGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFS 3151

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   GE++TWG  +Y ++G + S+  V KP  +ESL +  +  +A GA H   ++ + 
Sbjct: 3152 LALTKTGEVWTWGKGDYFRLG-HGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDT- 3209

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +    V++ P L+HG
Sbjct: 3210 GQVYAWGDNDHGQQGNGTTIVNRKPALVHG 3239



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 126/303 (41%), Gaps = 64/303 (21%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H LAL+   +V++WG    G+LG    ++ +   PK ++ L    ++    G +H 
Sbjct: 3964 SGGKHCLALSADNDVYSWGEGDDGKLG--HGNRLACETPKLIEALQGYEIIDIACGGAHS 4021

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TST            G+++TWG   +G+LG    D + Q  PK ++ L    V+   
Sbjct: 4022 AAITST------------GQLYTWGKGRYGRLG--HGDSEDQLKPKLIEELVGYKVIDV- 4066

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
                                   CGS  +Q +              +     +++WG+ +
Sbjct: 4067 ----------------------ACGSGDAQTL-------------CITDDDNVWSWGDGD 4091

Query: 182  YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
            YG++G   S+     P+++ESL  L +  + CG+  S  L++S S +Y +G G   +L  
Sbjct: 4092 YGKLGRGGSDGCKV-PKKIESLAGLGVIKVECGSQFSVALTRSGS-VYTWGKGDYHRLG- 4148

Query: 242  PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVL 301
                H T + +  P     VA   G+  +   +G L        G+  + T   + +G L
Sbjct: 4149 ----HGTGEHVRRP---KKVAALQGKKIISIATGSLHCVACSDEGE--VFTWGDNDEGQL 4199

Query: 302  SDD 304
             DD
Sbjct: 4200 GDD 4202



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 107/238 (44%), Gaps = 33/238 (13%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG--YSHCLV 63
           +S A++  G ++TWG   +G+LG  +A+      P  +  L+   +++   G  Y+H L 
Sbjct: 578 YSAAISANGALYTWGRGNYGRLGHGTAE--DCLTPTMISALSDEHIIKVACGSFYAHTLC 635

Query: 64  LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG 123
           +TS             G+V++WG   +G+LG   +D     +P+ ++ L +V +VQ   G
Sbjct: 636 ITSQ------------GKVYSWGDGDYGKLGRGGSD--GSKLPRLIEKLQNVKIVQVYCG 681

Query: 124 YSHCLVLTSSGVVTCTHKENG--CGSDPSQGVQ----SNLVQDSHTT--------ITSLN 169
               + L+  G V    K  G   G    + V+      +++D            + +L 
Sbjct: 682 AQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALT 741

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
             GE+Y WG NE  Q+  ++S   V +P+ +E+L    +  + CG   SF  +    R
Sbjct: 742 DQGEVYGWGKNENKQI-CDSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTDDNER 798



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 99/240 (41%), Gaps = 60/240 (25%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA-CAGYSHCLVL 64
           H LAL    EV++WG    G+LG    D  ++  P  ++ L    ++   C G       
Sbjct: 526 HYLALTKDYEVYSWGNGDGGRLG--HGDTSTKEEPTLIQALKGKDIIDVECGGT------ 577

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG- 123
                  +S A++  G ++TWG   +G+LG  +A+      P  +  L+   +++   G 
Sbjct: 578 -------YSAAISANGALYTWGRGNYGRLGHGTAE--DCLTPTMISALSDEHIIKVACGS 628

Query: 124 -YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
            Y+H L +TS G V                                      Y+WG+ +Y
Sbjct: 629 FYAHTLCITSQGKV--------------------------------------YSWGDGDY 650

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           G++G   S+ +   P+ +E L N+ I  + CGA  S  LS+    +Y +G G   +L  P
Sbjct: 651 GKLGRGGSDGS-KLPRLIEKLQNVKIVQVYCGAQFSVALSED-GHVYTWGKGEGWKLGHP 708



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 55/210 (26%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSTTGLWH 72
            G+++  G  T+G+LGL      S ++P  R     S  V++  A +S         G  H
Sbjct: 2946 GKLYACGEGTNGRLGL----GHSNNVPYPRPIPFLSQYVIKKVAVHS---------GGKH 2992

Query: 73   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 132
            ++AL   G+VF+WG    G+LG    ++ +   PK ++ L S  +     G SH   +TS
Sbjct: 2993 AMALTLDGKVFSWGEGEDGKLG--HGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITS 3050

Query: 133  SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNT 192
            SG                                      ELYTWG  EYG++G +  N 
Sbjct: 3051 SG--------------------------------------ELYTWGLGEYGRLG-HGDNI 3071

Query: 193  TVTKPQRVESLVNLPIALIACGANHSFVLS 222
            T  KP+ ++SLV   I  +ACG+  +  L+
Sbjct: 3072 TQLKPKLIKSLVGHRIVQVACGSRDAQTLA 3101



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 16/127 (12%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S+AL   G V+TWG   + +LG  + +   +  PK+V  L    ++    G  HC+    
Sbjct: 4127 SVALTRSGSVYTWGKGDYHRLGHGTGEHVRR--PKKVAALQGKKIISIATGSLHCV---- 4180

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
                    A +D GEVFTWG +  GQLG ++ +   +  P+ V  L    +     G +H
Sbjct: 4181 --------ACSDEGEVFTWGDNDEGQLGDDTTNAIQR--PRLVSALQGKKITNVACGSAH 4230

Query: 127  CLVLTSS 133
             L  +++
Sbjct: 4231 TLAWSTN 4237



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 57/129 (44%), Gaps = 16/129 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   GEV+TWG   + +LG   +D+  +  P  ++ L    V+    G  HCL
Sbjct: 3147 GAQFSLALTKTGEVWTWGKGDYFRLG-HGSDQHVRK-PTVIESLKDKKVIHVAVGALHCL 3204

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V GL  V + +   
Sbjct: 3205 AVT------------DTGQVYAWGDNDHGQQG--NGTTIVNRKPALVHGLEDVHINRVAC 3250

Query: 123  GYSHCLVLT 131
            G SH +  T
Sbjct: 3251 GSSHSIAWT 3259



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/258 (21%), Positives = 94/258 (36%), Gaps = 87/258 (33%)

Query: 7    SLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQLG +E A  K   IP   + L+++  VQ   G      +T
Sbjct: 3863 TLSWGGSGTIYGWGHNHRGQLGGIEGAKVK---IPTPCEALSTLRPVQLVGGEQTLFAVT 3919

Query: 66   S------------------------------------------TTGLWHSLALNDCGEVF 83
            +                                           +G  H LAL+   +V+
Sbjct: 3920 ADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVY 3979

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
            +WG    G+LG    ++ +   PK ++ L    ++    G +H   +TS+G         
Sbjct: 3980 SWGEGDDGKLG--HGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTG--------- 4028

Query: 144  GCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESL 203
                                         +LYTWG   YG++G  +S   + KP+ +E L
Sbjct: 4029 -----------------------------QLYTWGKGRYGRLGHGDSEDQL-KPKLIEEL 4058

Query: 204  VNLPIALIACGANHSFVL 221
            V   +  +ACG+  +  L
Sbjct: 4059 VGYKVIDVACGSGDAQTL 4076



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 21/189 (11%)

Query: 81   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCT 139
             VF WG +   QLG     K    +P +   L+ +  +    G     +++  G +  C 
Sbjct: 2895 RVFVWGLNDKDQLGGMKGSKVK--LPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACG 2952

Query: 140  HKENG-CGSDPSQGV--------------QSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
               NG  G   S  V              +   V        +L   G++++WG  E G+
Sbjct: 2953 EGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGK 3012

Query: 185  MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
            +G  N    + KP+ +E+L +  I  IACG++HS  ++ S   LY +G+G   +L    +
Sbjct: 3013 LGHGN-RLNLDKPKMIEALRSKKIRDIACGSSHSAAITSS-GELYTWGLGEYGRLGHGDN 3070

Query: 245  VHK-TPQLI 252
            + +  P+LI
Sbjct: 3071 ITQLKPKLI 3079



 Score = 48.1 bits (113), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 85/216 (39%), Gaps = 53/216 (24%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ + GL+ +++++  A               H LAL    EV++WG    G+LG    D
Sbjct: 504 PQEMTGLSGINMIKIAAHPEGK----------HYLALTKDYEVYSWGNGDGGRLG--HGD 551

Query: 100 KKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQ 159
             ++  P  ++ L    ++                          CG   S  + +N   
Sbjct: 552 TSTKEEPTLIQALKGKDIIDV-----------------------ECGGTYSAAISAN--- 585

Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                       G LYTWG   YG++G   +   +T P  + +L +  I  +ACG+ ++ 
Sbjct: 586 ------------GALYTWGRGNYGRLGHGTAEDCLT-PTMISALSDEHIIKVACGSFYAH 632

Query: 220 VLS-KSVSRLYAFGIGSAVQLDSPKS-VHKTPQLIH 253
            L   S  ++Y++G G   +L    S   K P+LI 
Sbjct: 633 TLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIE 668



 Score = 43.1 bits (100), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            TG  H +A +D GEVFTWG +  GQLG ++ +   +  P+ V  L    +     G +H 
Sbjct: 4174 TGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAIQR--PRLVSALQGKKITNVACGSAHT 4231

Query: 62   LVLTSTTG 69
            L  ++   
Sbjct: 4232 LAWSTNNA 4239


>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Callithrix jacchus]
          Length = 4774

 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3047 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3103

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  ++P+ ++ L    V Q   
Sbjct: 3104 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNVPQNIERLNGQGVCQIEC 3152

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3153 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3210

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3211 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3263



 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4038 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 4091

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4092 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4143

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4144 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4203

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4204 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4259



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 2994 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3051

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3052 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3097

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      V  N+ + +   +          
Sbjct: 3098 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFS 3157

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3158 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3215

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3216 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3245



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  +V+  A +S         G  H+
Sbjct: 2951 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-MVKKVAVHS---------GGRHA 2999

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3000 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3057

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3058 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3116

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3117 WGDGDFGKLGRGGSE-GCNVPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3174

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3175 FRLGHGSDVHVRKPQVVEG 3193



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3885 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 3941

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 3942 ADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4001

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG  S  +     P+ ++ L  V VV   AG +H   +T++G + T     
Sbjct: 4002 SWGEAEDGKLGHGS--RSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGR 4059

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4060 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4119

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4120 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4177

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4178 RRPRQVQGLQGKKVIAIATG 4197



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2900 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 2950

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 2951 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTV 3004

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3005 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3058

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3059 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3107



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2878 GSSGSLIRKKAAGLESTATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2933

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2934 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVH 2993

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 2994 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3052

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3053 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3109

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3110 DEGLVFSWGDGDFGKLGRGG 3129



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 105/240 (43%), Gaps = 43/240 (17%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG    D
Sbjct: 415 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG--HGD 462

Query: 100 KKSQSIPKRVKGL----ASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQS 155
                 PK +       A   VV    G ++   +T+ G +    + N    D  +   +
Sbjct: 463 TVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMN 522

Query: 156 NLVQDSHTTITSLNSP--------------------GELYTWGNNEYGQMGINNSNTTVT 195
            ++      I+ L+                      G++++WG+ +YG++G   S+   T
Sbjct: 523 EIL----IMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKT 578

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH-KTPQLIHG 254
            P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L      H + P+L+ G
Sbjct: 579 -PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTEEHVRYPKLLEG 636



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 55/217 (25%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +LA  + G+V++WG   +G+LG   +D      PK ++ L  + VV+   G        
Sbjct: 547 QTLAFYENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRCGSQF----- 599

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  S+AL   G+V++WG   + +LG     ++    PK ++GL    V+   AG +
Sbjct: 600 -------SIALTKDGQVYSWGKGDNQRLG--HGTEEHVRYPKLLEGLQGKKVIDVAAGST 650

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL LT                           +DS           E+++WG+N+  Q 
Sbjct: 651 HCLALT---------------------------EDS-----------EVHSWGSNDQCQH 672

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
             +    T  +P  +  L    I  IACG   SF  S
Sbjct: 673 -FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 708



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3153 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3210

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3211 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3256

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3257 GSSHSVAWTTVDVAT 3271



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 27/147 (18%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S+AL   G V+TWG   + +LG  S D   +  P++V+GL    V+    G  HC+  T 
Sbjct: 4149 SVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQVQGLQGKKVIAIATGSLHCVCCTE 4206

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGY 124
                         GEV+TWG +  GQLG    D  + +I  P+ V  L    V +   G 
Sbjct: 4207 D------------GEVYTWGDNDEGQLG----DGTTNAIQRPRLVAALQGKKVNRVACGS 4250

Query: 125  SHCLVLTSSGVVTCTHKENGCGSDPSQ 151
            +H L  ++S       K    G  P+Q
Sbjct: 4251 AHTLAWSTS-------KPTSAGKLPAQ 4270



 Score = 46.2 bits (108), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 14/151 (9%)

Query: 106 PKRVKGLASVSVVQACAGYSHCLVLTSSGVV-TCTHKENGCGSDPSQGVQS-NLVQ---- 159
           P + +GLA++ V Q        L+L+ +G V T  +  +       QG+ S N+V+    
Sbjct: 373 PIQCEGLANLGVTQIACAEKRFLILSRNGCVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 432

Query: 160 -DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESL----VNLPIALIACG 214
            D H  + +L + GE+Y+WG  + G++G +     + +P+ + +         +  IACG
Sbjct: 433 SDGHHYL-ALAATGEVYSWGCGDGGRLG-HGDTVPLEEPKVISAFSGKQAGKHVVHIACG 490

Query: 215 ANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
           + +S  ++     LY +G G+  +LD  +S 
Sbjct: 491 STYSAAITAE-GELYTWGRGNYXRLDHGRSA 520


>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
           rerio]
          Length = 4647

 Score = 96.3 bits (238), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG   +D  S+++P  VK ++ V  V AC G SH 
Sbjct: 516 AGYRHSAAVTNDGELYTWGEGDFGRLG--HSDSHSRNVPTLVKDISGVGQV-AC-GSSHT 571

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + +             D   V+++GG  +G+LG    D      PK ++ L    + + C
Sbjct: 572 IAVA-----------QDGRIVWSFGGGDNGKLG--HGDTNRVYRPKVIEALHGFIIRKVC 618

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
           AG    L LTS+G V      +C     GCGS  +  ++  L++             DSH
Sbjct: 619 AGSQSSLALTSAGQVFAWGCGSCL----GCGSSETTSLRPRLIEELSITKIIDISCGDSH 674

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L+   E++ WGNN  GQ G  +++T VTKP++V  L  + I  I  G +HS  
Sbjct: 675 --CLALSHENEVFAWGNNAMGQCGQGHTSTPVTKPKKVIGLEGVSIQQITAGTSHSLA 730



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 112/240 (46%), Gaps = 27/240 (11%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HSLAL + GEVF+WG   +G+LG  ++++  Q  PK+++GL    VVQ   G+ H  V+T
Sbjct: 3956 HSLALTETGEVFSWGDGDYGKLGHGNSER--QRRPKQIEGLQGEEVVQLACGFKHSAVVT 4013

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            +             G++FT+G    G+LG  S   K   IP+RV  L    + Q   G  
Sbjct: 4014 AD------------GKLFTFGSGDSGRLGQRSTSNK--MIPERVTALDGHHIGQRLIGLP 4059

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
              ++   +        E     D + G +          I +L++ G++Y WG N   Q+
Sbjct: 4060 DAMLKNHNRPQIIPALEGVFIEDIAVGCEH---------ILALSNTGDVYAWGCNCEAQL 4110

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            G+ +SN  V +P  V +L    I  I+ G  HS   +       A G  S +QL  P+SV
Sbjct: 4111 GLGHSN-PVKEPILVTTLQGKNIRQISAGRCHSSAWTTPALSTRASGC-SGIQLGLPQSV 4168



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 58/263 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYSHCLVL 64
           H+LA+   GEVF+WG   +G+LG    +  +Q  PK ++G L    VV   AGY H    
Sbjct: 467 HTLAVTAEGEVFSWGDGDYGKLG--HGNSATQKYPKIIQGPLLGKVVVCVSAGYRH---- 520

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
                   S A+ + GE++TWG    G+LG   +D  S+++P  VK ++ V  V AC G 
Sbjct: 521 --------SAAVTNDGELYTWGEGDFGRLG--HSDSHSRNVPTLVKDISGVGQV-AC-GS 568

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
           SH + +   G +                                     ++++G  + G+
Sbjct: 569 SHTIAVAQDGRI-------------------------------------VWSFGGGDNGK 591

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G  ++N  V +P+ +E+L    I  +  G+  S  L+ S  +++A+G GS +   S ++
Sbjct: 592 LGHGDTNR-VYRPKVIEALHGFIIRKVCAGSQSSLALT-SAGQVFAWGCGSCLGCGSSET 649

Query: 245 VHKTPQLIHGPWIASPVAMTAGE 267
               P+LI    I   + ++ G+
Sbjct: 650 TSLRPRLIEELSITKIIDISCGD 672



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 135/319 (42%), Gaps = 48/319 (15%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L + +++ A  GY    ++TS     HS
Sbjct: 3909 GTVLAVGEGSYGRLGQGNSDD-----------LYTPTIISALQGYVVTQLVTSYGSDGHS 3957

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL + GEVF+WG   +G+LG  ++++  Q  PK+++GL    VVQ   G+ H  V+T+ 
Sbjct: 3958 LALTETGEVFSWGDGDYGKLGHGNSER--QRRPKQIEGLQGEEVVQLACGFKHSAVVTAD 4015

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            G +       G G     G +S   +     +T+L+          +  GQ  I   +  
Sbjct: 4016 GKLFTF----GSGDSGRLGQRSTSNKMIPERVTALD---------GHHIGQRLIGLPDAM 4062

Query: 194  V---TKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQ 250
            +    +PQ + +L  + I  IA G  H   LS +   +YA+G     QL           
Sbjct: 4063 LKNHNRPQIIPALEGVFIEDIAVGCEHILALSNT-GDVYAWGCNCEAQLG---------- 4111

Query: 251  LIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNP 310
            L H   +  P+        LV+   G  +++I +G  HS    T +     S    +   
Sbjct: 4112 LGHSNPVKEPI--------LVTTLQGKNIRQISAGRCHSSAWTTPALSTRASGCSGIQLG 4163

Query: 311  ATQILDVNFERLKECEREV 329
              Q +   +  LK+C  EV
Sbjct: 4164 LPQSVPPQYNALKDCSPEV 4182



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 62/131 (47%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+VF WG  +   LG  S++  S   P+ ++ L+   ++    G SHC
Sbjct: 619 AGSQSSLALTSAGQVFAWGCGSC--LGCGSSETTSLR-PRLIEELSITKIIDISCGDSHC 675

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EVF WG +  GQ G +       + PK+V GL  VS+ Q  
Sbjct: 676 L------------ALSHENEVFAWGNNAMGQCG-QGHTSTPVTKPKKVIGLEGVSIQQIT 722

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 723 AGTSHSLAWTA 733



 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 118/282 (41%), Gaps = 41/282 (14%)

Query: 36  SQSIPKRVKGLASVSVV------QACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDT 89
           +Q + K   GL S+S V      + C   S+CL   S      S + ND   V+ WG ++
Sbjct: 320 TQVLKKDADGLCSLSHVALCLFEEICTLASNCLCSCSAGSSSSSGSENDTVMVYVWGSNS 379

Query: 90  HGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN----GC 145
             QL   + +K  Q  PK  +G +   +++A  G      +++ G V    K +    G 
Sbjct: 380 SHQLAEGTLEKILQ--PKLAQGFSDAQMIEA--GQYCTFSVSADGAVKACGKGSYGRLGL 435

Query: 146 GSDPSQGVQSNLVQDSHTTITSLNSP-------------GELYTWGNNEYGQMGINNSNT 192
           G   +Q +   LV +   T+  ++S              GE+++WG+ +YG++G  NS T
Sbjct: 436 GDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDYGKLGHGNSAT 495

Query: 193 TVTKPQRVESLVNLP-----IALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK 247
                Q+   ++  P     +  ++ G  HS  ++     LY +G G   +L    S  +
Sbjct: 496 -----QKYPKIIQGPLLGKVVVCVSAGYRHSAAVTND-GELYTWGEGDFGRLGHSDSHSR 549

Query: 248 T-PQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
             P L+        VA  +     V+  G +V    + GGD+
Sbjct: 550 NVPTLVKDISGVGQVACGSSHTIAVAQDGRIVWS--FGGGDN 589



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 29/174 (16%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G    G+LG  S   K   IP+RV  L    + Q   G    +
Sbjct: 4005 GFKHSAVVTADGKLFTFGSGDSGRLGQRSTSNK--MIPERVTALDGHHIGQRLIGLPDAM 4062

Query: 63   VLTS-----------------TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI 105
            +                      G  H LAL++ G+V+ WG +   QLGL  ++   +  
Sbjct: 4063 LKNHNRPQIIPALEGVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLGLGHSNPVKE-- 4120

Query: 106  PKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQ 159
            P  V  L   ++ Q  AG  H    T+  + T   + +GC      G+Q  L Q
Sbjct: 4121 PILVTTLQGKNIRQISAGRCHSSAWTTPALST---RASGC-----SGIQLGLPQ 4166


>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
          Length = 1871

 Score = 96.3 bits (238), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 143 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 199

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 200 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 248

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
           G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 249 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 306

Query: 170 ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 307 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 359



 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    V+    G    
Sbjct: 1135 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVIDIACG---- 1188

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 1189 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 1240

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 1241 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 1300

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 1301 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 1356



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 90  SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 147

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
             LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 148 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 193

Query: 122 AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
            G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 194 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 253

Query: 167 -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 254 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 311

Query: 226 SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
            ++YA+G      Q +   +V++ P L+ G
Sbjct: 312 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 341



 Score = 72.4 bits (176), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 982  TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 1038

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 1039 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 1098

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 1099 SWGEAKDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 1156

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  I      G+           +++WG+ +YG++G 
Sbjct: 1157 YGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 1216

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 1217 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 1274

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 1275 RRPRQVQGLQGKKVIAIATG 1294



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 52/209 (24%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
           G+V++ G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 47  GKVYSCGEATNGRLGL-GMSSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 95

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 96  TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 153

Query: 134 GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
           G                                      ELYTWG  EYG++G +  NTT
Sbjct: 154 G--------------------------------------ELYTWGLGEYGRLG-HGDNTT 174

Query: 194 VTKPQRVESLVNLPIALIACGANHSFVLS 222
             KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 175 QLKPKMVKVLLGHRVIQVACGSRDAQTLA 203



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 16/135 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G   SLAL   G V+TWG   + +LG  S     +  P+ V+GL    +V    G  HCL
Sbjct: 249 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK--PQVVEGLRGKKIVHVAVGALHCL 306

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 307 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 352

Query: 123 GYSHCLVLTSSGVVT 137
           G SH +  T+  V T
Sbjct: 353 GSSHSVAWTTVDVAT 367



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 34/212 (16%)

Query: 105 IPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP------- 149
           +P   + L++++VVQ   G      +T  G V +C    NG        G+ P       
Sbjct: 18  VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITA 77

Query: 150 --SQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLP 207
             S  V+   V       T+L   G++++WG  + G++G + S     KP+ +E+L    
Sbjct: 78  LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKR 136

Query: 208 IALIACGANHSFVLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHG 254
           I  IACG++HS  L+ S   LY +G+G   +L          PK V     H+  Q+  G
Sbjct: 137 IRDIACGSSHSAALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG 195

Query: 255 PWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
              A  +A+T  ++ LV   G     K+  GG
Sbjct: 196 SRDAQTLALT--DEGLVFSWGDGDFGKLGRGG 225


>gi|332019071|gb|EGI59603.1| Ubiquitin-protein ligase E3A [Acromyrmex echinatior]
          Length = 877

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 95/193 (49%), Gaps = 26/193 (13%)

Query: 902  VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQ 961
            + +T FY   L+   ++  D+  + S  P   +     NY FI     KT  L  D RI+
Sbjct: 446  IPFTDFYNEPLSDAIEMDKDFAYYKSEEPQKFS---FMNYAFILTPATKTLGLYYDNRIR 502

Query: 962  M--EHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIREL---AQYTTNDFKKPL 1016
            M  E  M+      FLQT      N YL ++V RD++++D + EL   A    +D KK L
Sbjct: 503  MYSERRMS------FLQTVVGQPTNPYLRLKVRRDHLIDDALVELEMVAMENPSDLKKQL 556

Query: 1017 KVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSE 1076
             V            +F GE+  D GGV +EF  L+++EI +P +GMF   E+T+  WF+ 
Sbjct: 557  VV------------EFEGEQGVDEGGVSKEFFQLVVEEIFNPDFGMFTTQEDTQMTWFNP 604

Query: 1077 DTFEDQNMYFLIG 1089
             +FE    + LIG
Sbjct: 605  TSFESDAQFTLIG 617



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 59/95 (62%)

Query: 723 TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQD 782
           T  E+T+  WF+  +FE      LIG + GLAIYN  I+++ FP+ +Y+K+L       D
Sbjct: 592 TTQEDTQMTWFNPTSFESDAQFTLIGIVIGLAIYNNVILDVRFPMVVYRKLLGRKGGFPD 651

Query: 783 LKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
           L+D SPTL ++++++++Y   D+ + F  TFR  Y
Sbjct: 652 LEDWSPTLYRTMKELIEYTRDDMPETFMQTFRVSY 686


>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
           containing protein 2 [Oryctolagus cuniculus]
          Length = 551

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 97/231 (41%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV   A    C 
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGPTANQPIPRRVTGCLQNKVVVNIACGQMC- 216

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ D GEV+ WG + +GQLGL S    +Q  P RV  L  + V +   
Sbjct: 217 ----------SMAVVDTGEVYVWGYNGNGQLGLGSGG--NQPTPCRVAALQGIRVQRVAC 264

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 265 GYAHTLVLTDE--------------------------------------GQVYAWGANSY 286

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 287 GQLGTGNKSNQSYPTPVVVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L+   +  AC  Y           
Sbjct: 63  VND--EIFVLGTNCSGCLGL--GDAQSTIEPRRLDSLSGKKI--ACLSY----------- 105

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P            H  + +  + GE++TWG+N Y Q+G   +N  + 
Sbjct: 106 ----------GSGP------------HVVLAT--TEGEVFTWGHNAYSQLGNGTTNHGLV 141

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS-PKSVHKTPQLIHG 254
             Q   +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S P +    P+ + G
Sbjct: 142 PCQISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGPTANQPIPRRVTG 200


>gi|336468508|gb|EGO56671.1| hypothetical protein NEUTE1DRAFT_130555 [Neurospora tetrasperma FGSC
            2508]
 gi|350289229|gb|EGZ70454.1| HECT-domain-containing protein [Neurospora tetrasperma FGSC 2509]
          Length = 1333

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 23/194 (11%)

Query: 899  GRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQ 958
            G+ +A + FY   L    D+  D+  W S +     +   C +PF+    AK  +LE D 
Sbjct: 883  GQILATSDFYT-TLLDDSDLVADFETWESKK----GKFAFCQFPFLLSIGAKNQILEYDA 937

Query: 959  RIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTN---DFKKP 1015
            R QME       F   L       + Q+L + V RD +V+D+++ +++   +   D KK 
Sbjct: 938  RRQMEDKARDAFFNSILTH---RVIQQHLVLNVRRDCLVDDSLKAVSEVIGSGGEDIKKG 994

Query: 1016 LKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFS 1075
            LK+N            F+GEE  DAGG+R+E+ +LL++E+ +P +GMF   E+++  +F+
Sbjct: 995  LKIN------------FKGEEGIDAGGLRKEWFLLLVREVFNPDHGMFVYDEDSQYCYFN 1042

Query: 1076 EDTFEDQNMYFLIG 1089
              + E    YFL+G
Sbjct: 1043 PASLEPSEQYFLVG 1056



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 16/103 (15%)

Query: 726  EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL----------- 774
            E+++  +F+  + E     FL+G + GLAIYN TI+++  P   ++K+L           
Sbjct: 1034 EDSQYCYFNPASLEPSEQYFLVGVVFGLAIYNSTILDVALPPFAFRKLLMAAPPATLATS 1093

Query: 775  --DEPIL--LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
               +P+   L DL +  P LA  L+ +L+Y + D+E  F + F
Sbjct: 1094 QPRQPMTYSLDDLAEYRPRLASGLRQLLEY-DGDVESTFCLDF 1135


>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
          Length = 527

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 98/231 (42%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV   A    C 
Sbjct: 136 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVVNIACGQMC- 192

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ D GEV+ WG + +GQLGL S+   +Q  P RV  L  + V +   
Sbjct: 193 ----------SMAVVDTGEVYVWGYNGNGQLGLGSSG--NQPTPCRVSALQGIRVQRVAC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 241 GYAHTLVLTDE--------------------------------------GQVYAWGANSY 262

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 263 GQLGTGNKSNQSYPTPVVVEK--DRIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L+   +  AC  Y           
Sbjct: 39  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDCLSGKKI--ACLSY----------- 81

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P            H  + +  + GE++TWG+N Y Q+G   +N  + 
Sbjct: 82  ----------GSGP------------HVVLAT--TEGEVFTWGHNAYSQLGNGTTNHGLV 117

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  + ++  P+ + G
Sbjct: 118 PCHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG 176


>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
            boliviensis]
          Length = 4472

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 2745 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 2801

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  ++P+ ++ L    V Q   
Sbjct: 2802 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNVPQNIERLNGQGVCQIEC 2850

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 2851 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 2908

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 2909 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2961



 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 3736 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 3789

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 3790 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPTKIDSLTGLGVVKVE 3841

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 3842 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3901

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 3902 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 3957



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 2692 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 2749

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 2750 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 2795

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      V  N+ + +   +          
Sbjct: 2796 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFS 2855

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 2856 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 2913

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 2914 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 2943



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 195 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKAISAFSGKQAGKHVVHI--- 245

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 246 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVA--- 298

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 299 --------------------CGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 325

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 326 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 383

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 384 EHVRYPKLLEG 394



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 248 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 300

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 301 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 353

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 354 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 413

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 414 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 466



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  +V+  A +S         G  H+
Sbjct: 2649 GKVYACGEATNGRLGL-GLSSGTVPIPRQITALSSY-MVKKVAVHS---------GGRHA 2697

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 2698 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 2755

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 2756 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 2814

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 2815 WGDGDFGKLGRGGSE-GCNVPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 2872

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 2873 FRLGHGSDVHVRKPQVVEG 2891



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 129/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3583 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 3639

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 3640 ADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3699

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG  S  +     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 3700 SWGEAEDGKLGHGS--RSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 3757

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 3758 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 3817

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS   +Y +G G   +L      H 
Sbjct: 3818 GGSDGCKV-PTKIDSLTGLGVVKVECGSQFSVALTKS-GAVYTWGKGDYHRLGHGSDDHV 3875

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 3876 RRPRQVQGLQGKKVIAIATG 3895



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2598 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 2648

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 2649 -----GKVYACGEATNGRLGL-GLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTV 2702

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 2703 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 2756

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 2757 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2805



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2576 GGSGSLIRKKAAGLESTATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2631

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2632 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVH 2691

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 2692 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 2750

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 2751 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 2807

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 2808 DEGLVFSWGDGDFGKLGRGG 2827



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 27/147 (18%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S+AL   G V+TWG   + +LG  S D   +  P++V+GL    V+    G  HC+  T 
Sbjct: 3847 SVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQVQGLQGKKVIAIATGSLHCVCCTE 3904

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGY 124
                         GEV+TWG +  GQLG    D  + +I  P+ V  L    V +   G 
Sbjct: 3905 D------------GEVYTWGDNDEGQLG----DGTTNAIQRPRLVAALQGKKVNRVACGS 3948

Query: 125  SHCLVLTSSGVVTCTHKENGCGSDPSQ 151
            +H L  ++S       K    G  P+Q
Sbjct: 3949 AHTLAWSTS-------KPTSAGKLPAQ 3968



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 2851 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 2908

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 2909 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 2954

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 2955 GSSHSVAWTTVDVAT 2969



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 173 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 217

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 218 -HGDTVPLEEPKAISAFSGKQAGKHVVHI----------------ACGS----------- 249

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 250 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 304

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 305 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 341


>gi|448521863|ref|XP_003868588.1| hypothetical protein CORT_0C03080 [Candida orthopsilosis Co 90-125]
 gi|380352928|emb|CCG25684.1| hypothetical protein CORT_0C03080 [Candida orthopsilosis]
          Length = 902

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 84/154 (54%), Gaps = 18/154 (11%)

Query: 937  FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHT-LNQYLEVEVSRDN 995
            +LC YPF+    +K ++LE + R QME    +     F+ + +    ++ YL ++V RD 
Sbjct: 500  YLCQYPFLISLGSKISVLEYEARRQMERKAEEA----FINSLDKRVVIDVYLRIKVRRDR 555

Query: 996  IVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEI 1055
            IV+D+++ +    TN  KK LKV            +F  E   DAGG+R+E+ +LL KEI
Sbjct: 556  IVQDSMKAIKSNLTN-LKKSLKV------------QFVNEPGVDAGGLRKEWFILLTKEI 602

Query: 1056 LDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              P+ G+F   +++  +WF+    ED  MYFL G
Sbjct: 603  FHPQAGLFHNVDDSNLLWFNMFPLEDPEMYFLFG 636



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 7/109 (6%)

Query: 712 YPKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYK 771
           +P+ G+ H      +++  +WF+    ED  M FL G + GLAIYN TI+++ FP+ALYK
Sbjct: 604 HPQAGLFH----NVDDSNLLWFNMFPLEDPEMYFLFGAVLGLAIYNSTILDLQFPVALYK 659

Query: 772 KILDEPILLQDLKDLSPTLAK---SLQDILDYREPDLEDVFGITFRNWY 817
            +L + +  +D K L P   K    L+ + D +  DLE  F +T ++ +
Sbjct: 660 ILLGKSLDKEDYKQLYPESYKCLTQLRAMGDRQLKDLELTFEVTVKDTF 708


>gi|212540186|ref|XP_002150248.1| ubiquitin-protein ligase (Hul4), putative [Talaromyces marneffei ATCC
            18224]
 gi|210067547|gb|EEA21639.1| ubiquitin-protein ligase (Hul4), putative [Talaromyces marneffei ATCC
            18224]
          Length = 1244

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 24/177 (13%)

Query: 917  DIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQ 976
            D+  D+  W S     + R   C YPF     AK+ +LE D R QM     Q     FL 
Sbjct: 796  DLVSDFEAWESR----TARFSFCQYPFFLSIAAKSRILEHDARRQMNIKARQA----FLD 847

Query: 977  T-FNPHTLNQYLEVEVSRDNIVEDTIR---ELAQYTTNDFKKPLKVNDTSPIYLAPQVKF 1032
            +  N   ++QYL + V RD +VED++R   E+    + D KK L++            +F
Sbjct: 848  SILNHKDVSQYLNLRVRRDCLVEDSLRGVSEVVGAGSEDIKKSLRI------------EF 895

Query: 1033 RGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             GEE  DAGG+R+E+ +LL++E+ DP +G+F   ++++  +F+   FE    +FL+G
Sbjct: 896  IGEEGVDAGGLRKEWFLLLVREVFDPNHGLFTYDDDSQFCYFNPYCFESSEQFFLVG 952



 Score = 50.8 bits (120), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 16/111 (14%)

Query: 718  NHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL--- 774
            NH   T  ++++  +F+   FE     FL+G L GLAIYN TI+++  P   +KK+L   
Sbjct: 922  NHGLFTYDDDSQFCYFNPYCFESSEQFFLVGVLLGLAIYNSTILDIALPPFAFKKLLAAA 981

Query: 775  ----------DEPIL--LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                       +P    L DL +  P LAK L+ +L++ + D+++ F   F
Sbjct: 982  PSTSIPAAAQRQPHTSSLDDLAEYRPALAKGLRALLEF-DGDVQETFCYDF 1031


>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Loxodonta africana]
          Length = 4838

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3109 GSSHSAAITSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3165

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3166 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3214

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3215 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3272

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3273 AVTDAGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3325



 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4102 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 4155

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4156 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4207

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4208 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4267

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4268 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4323



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3056 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3113

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3114 AAITSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3159

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3160 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3219

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ + 
Sbjct: 3220 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA- 3277

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3278 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3307



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 557

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   + IP  V GL  + V+      
Sbjct: 558 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEVIPVLVAGLKGLKVIDVA--- 610

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 611 --------------------CGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 637

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 638 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 695

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 696 EHVRYPKLLEG 706



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3013 GKVYACGEATNGRLGL-GLSSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3061

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   +TSS
Sbjct: 3062 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3119

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3120 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3178

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3179 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3236

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3237 FRLGHGSDVHVRKPQVVEG 3255



 Score = 73.2 bits (178), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   + IP  V GL  + V+    G     
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEVIPVLVAGLKGLKVIDVACG----- 612

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 665

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 72.4 bits (176), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3949 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALAALRPVQLIGGEQTLFAVT 4005

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4006 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVY 4065

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ V+ L  + VV   AG +H   +T++G + T     
Sbjct: 4066 SWGEAEDGKLG--HGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4123

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4124 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4183

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4184 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4241

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4242 RRPRQVQGLQGKKVIAIATG 4261



 Score = 67.8 bits (164), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 98/228 (42%), Gaps = 40/228 (17%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2962 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3012

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3013 -----GKVYACGEATNGRLGL-GLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3066

Query: 133  SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN------------------SPGEL 174
             G V       G G D   G  S +  D    I +L                   S GEL
Sbjct: 3067 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3122

Query: 175  YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            YTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3123 YTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3169



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2940 GSSGSLMRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2995

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2996 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVH 3055

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3056 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3114

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             ++ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3115 AITSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3171

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3172 DEGLVFSWGDGDFGKLGRGG 3191



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3215 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3272

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3273 AVT------------DAGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3318

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3319 GSSHSVAWTTVDVAT 3333



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++++          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 485 PQLVQGLASRNIIK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 529

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 530 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 561

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S   V  P  V  L  L +  +ACG+  +
Sbjct: 562 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEVI-PVLVAGLKGLKVIDVACGSGDA 616

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 653


>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
          Length = 527

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 101/245 (41%), Gaps = 56/245 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV   A    C 
Sbjct: 136 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVVNIACGQMC- 192

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ + GEVF WG + +GQLGL S+   +Q  P RV  L  + V +   
Sbjct: 193 ----------SMAVVNTGEVFVWGYNGNGQLGLGSSG--NQPTPCRVAALQGIRVQRVAC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT  G                                      ++Y WG N Y
Sbjct: 241 GYAHTLVLTDEG--------------------------------------QVYAWGANSY 262

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G      +  
Sbjct: 263 GQLGTGNKSNQSYPTPVVVEK--DRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTL 320

Query: 242 PKSVH 246
           P   H
Sbjct: 321 PHLTH 325



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L    +  AC  Y           
Sbjct: 39  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLTGKKI--ACLSY----------- 81

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE++TWG+N Y Q+G   +N  + 
Sbjct: 82  ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNAGLV 117

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  + ++  P+ + G
Sbjct: 118 PYHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG 176


>gi|344239641|gb|EGV95744.1| putative E3 ubiquitin-protein ligase HERC3 [Cricetulus griseus]
          Length = 286

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/92 (48%), Positives = 67/92 (72%)

Query: 722 ITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQ 781
            T Y++++ +WFS+  F ++N   LIG  CGLAIYN T++++ FPLALYKK+L+    L+
Sbjct: 2   FTYYQDSQLLWFSDTCFVERNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKPGLE 61

Query: 782 DLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           DLK+LSPT  +SLQ++LDY   D+E+ F + F
Sbjct: 62  DLKELSPTEGRSLQELLDYPGEDVEETFCLNF 93



 Score = 47.0 bits (110), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 29/40 (72%)

Query: 1103 MFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
            MF  Y++++ +WFS+  F ++N + LIG  CGLAIYN TV
Sbjct: 1    MFTYYQDSQLLWFSDTCFVERNWFHLIGITCGLAIYNSTV 40


>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Papio anubis]
 gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
          Length = 556

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 98/231 (42%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     V           
Sbjct: 165 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTVNQPIPRRVTGCLQNKV----------- 211

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V+T   G    +A+ D GEV+ WG + +GQLGL S+   +Q  P RV  L  + V +   
Sbjct: 212 VVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSG--NQPTPCRVAALQGIRVQRVAC 269

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 270 GYAHTLVLTDE--------------------------------------GQVYAWGANSY 291

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 292 GQLGTGNKSNQSYPTPVTVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 2/86 (2%)

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           + GE++TWG+N Y Q+G   +N  +   Q   +L N  +  +ACG+ HS VL+ S   ++
Sbjct: 121 TEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLT-SDGEVF 179

Query: 230 AFGIGSAVQLDSPKSVHK-TPQLIHG 254
           A+G  ++ Q+ S  +V++  P+ + G
Sbjct: 180 AWGYNNSGQVGSGSTVNQPIPRRVTG 205


>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Takifugu rubripes]
          Length = 3883

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 114/236 (48%), Gaps = 38/236 (16%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+   GE++TWG    G+LG   +D +S+++P  VK ++ V  V AC G SH 
Sbjct: 527 AGYRHSAAVTKDGELYTWGEGDFGRLG--HSDSQSRNMPTLVKDISGVGQV-AC-GSSHT 582

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + +             D   V+++GG  +G+LG    D      PK ++ L    + + C
Sbjct: 583 IAVA-----------QDGRTVWSFGGGDNGKLG--HGDTNRVYRPKVIEALHGFIIRKVC 629

Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQD-SHTTIT-------- 166
           AG    L LTS+G V      +C     GCGS  +  ++   V+D S T I         
Sbjct: 630 AGSQSSLALTSAGQVFAWGCGSCL----GCGSSETTSLRPRFVEDLSITKIIDISCGDSH 685

Query: 167 --SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
             +L+   E+Y WGNN  GQ G  +++T +T+P++V  L  + I  I  G +HS  
Sbjct: 686 CLALSHENEVYAWGNNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLA 741



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 108/248 (43%), Gaps = 56/248 (22%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG    G+LG    + + Q  PK+++ L    VVQ   G+ H  V+T
Sbjct: 3116 HSMALTETGEVFSWGDGDFGKLG--HGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVT 3173

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            +             G++FT+G    G+LG  S   K   +P+RV  L    V Q   G +
Sbjct: 3174 AD------------GKLFTFGSGESGRLGQRSTSNK--MLPERVAALEGYHVGQVSCGLN 3219

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H LVL+  G+                                      ++ +G+ +YG++
Sbjct: 3220 HTLVLSLDGMA-------------------------------------VWAFGDGDYGKL 3242

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL-DSPKS 244
            G   S+T    PQ+VE L N  +  + CGA  S V++     +Y FG    + L DS   
Sbjct: 3243 GA-GSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACD-GHVYTFGQERLIGLPDSMLK 3300

Query: 245  VHKTPQLI 252
                PQ++
Sbjct: 3301 NRSNPQVV 3308



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 52/241 (21%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S  +   G V   G   +G+LG  ++D            L   +++ A  GY    ++TS
Sbjct: 3062 SFLIQSNGVVTAVGEGQYGRLGQGNSDD-----------LYVPTIISAFQGYVVTQLVTS 3110

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
                 HS+AL + GEVF+WG    G+LG    + + Q  PK+++ L    VVQ   G+ H
Sbjct: 3111 CGSDGHSMALTETGEVFSWGDGDFGKLG--HGNNERQRRPKQIEALQGEDVVQLACGFRH 3168

Query: 127  CLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG 186
              V+T+ G                                      +L+T+G+ E G++G
Sbjct: 3169 SAVVTADG--------------------------------------KLFTFGSGESGRLG 3190

Query: 187  INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH 246
               S +    P+RV +L    +  ++CG NH+ VLS     ++AFG G   +L +  S  
Sbjct: 3191 -QRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSSTA 3249

Query: 247  K 247
            K
Sbjct: 3250 K 3250



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 125/296 (42%), Gaps = 83/296 (28%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV-----KGLASVSVVQACA 56
            G + + +++  G V   G  ++G+LGL   D  +QS+PK++     + +  VS  +   
Sbjct: 419 AGQYCTFSVSTDGSVKACGKGSYGRLGL--GDSNNQSLPKKLVLEPHRNIKKVSSSKGSD 476

Query: 57  GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASV 115
           G              H+LA+   GEVF+WG   +G+LG    +  +Q  PK ++G L S 
Sbjct: 477 G--------------HTLAITVDGEVFSWGDGEYGKLG--HGNSATQKYPKIIQGPLFSK 520

Query: 116 SVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELY 175
            VV A AGY H   +T  G                                      ELY
Sbjct: 521 IVVSASAGYRHSAAVTKDG--------------------------------------ELY 542

Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
           TWG  ++G++G ++S +    P  V+ +    +  +ACG++H+  +++    +++FG G 
Sbjct: 543 TWGEGDFGRLGHSDSQSR-NMPTLVKDISG--VGQVACGSSHTIAVAQDGRTVWSFGGG- 598

Query: 236 AVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
               D+ K  H     ++ P +   +              G +++K+ +G   S+ 
Sbjct: 599 ----DNGKLGHGDTNRVYRPKVIEALH-------------GFIIRKVCAGSQSSLA 637



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 115/257 (44%), Gaps = 31/257 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G    G+LG  S   K   +P+RV  L    V Q   G +H L
Sbjct: 3165 GFRHSAVVTADGKLFTFGSGESGRLGQRSTSNK--MLPERVAALEGYHVGQVSCGLNHTL 3222

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            VL+            D   V+ +G   +G+LG  S+  K    P++V+ L +  + + C 
Sbjct: 3223 VLSL-----------DGMAVWAFGDGDYGKLGAGSSTAK--YYPQKVEQLCNKGMKKVCC 3269

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPS-----QGVQSNLVQDSHTTITSL 168
            G    +V+   G V    +E   G         S+P      +G+    +      + +L
Sbjct: 3270 GAQFSVVVACDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLAL 3329

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
            +S G++Y WG N  GQ+G+ + N  V +P  + +L    I  I+ G  HS   +   +  
Sbjct: 3330 SSTGDVYAWGCNSEGQLGLGHCN-PVKEPTLITALQGKNIKQISAGRCHSSAWTTPSTSK 3388

Query: 229  YAFGIGSAVQLDSPKSV 245
             + G G+ +QL  P+SV
Sbjct: 3389 NSGGPGN-LQLGLPQSV 3404



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   SLAL   G+VF WG  +   LG  S++  S   P+ V+ L+   ++    G SHC
Sbjct: 630 AGSQSSLALTSAGQVFAWGCGSC--LGCGSSETTSLR-PRFVEDLSITKIIDISCGDSHC 686

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L            AL+   EV+ WG +T GQ G +       + PK+V GL  VS+ Q  
Sbjct: 687 L------------ALSHENEVYAWGNNTMGQCG-QGHTSTPITRPKKVLGLEGVSIQQIT 733

Query: 122 AGYSHCLVLTS 132
           AG SH L  T+
Sbjct: 734 AGTSHSLAWTA 744


>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
 gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
          Length = 367

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 73/249 (29%), Positives = 120/249 (48%), Gaps = 33/249 (13%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
           H+L +   GE+FT+G + +GQLGL  + D  S  +   ++G    SV  AC         
Sbjct: 129 HTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSV--AC--------- 177

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  HSLA  + G VF+WG   +G LG    + + + +P RV GL  + +V A  G+
Sbjct: 178 ----GSEHSLAATESGTVFSWGWGRYGNLG--DGESQDRYLPTRVVGLEGIRMVSAECGW 231

Query: 125 SHCLVLTSSGVVTC----THKENGCGSDPSQGVQSNLVQDSHTTITSL----------NS 170
            H  V++  G V       + + G G    + V   +    HT I+S+          +S
Sbjct: 232 RHSAVVSEDGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHTRISSVAGGWRHTMAADS 291

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
            G LY WG N++GQ+G+ +S+   +      +L    ++L+ CG  H+  +++   R+Y+
Sbjct: 292 SGNLYGWGWNKFGQLGLGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEG-GRVYS 350

Query: 231 FGIGSAVQL 239
           +G G   QL
Sbjct: 351 WGRGVNGQL 359



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 31/199 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA  + G VF+WG   +G LG    + + + +P RV GL  + +V A  G+ H  
Sbjct: 178 GSEHSLAATESGTVFSWGWGRYGNLG--DGESQDRYLPTRVVGLEGIRMVSAECGWRHSA 235

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V++              G VFT+G   +GQLG    D   +++P +V  L    +     
Sbjct: 236 VVSED------------GRVFTFGWSKYGQLG--HGDHTDRTVPCQVAALRHTRISSVAG 281

Query: 123 GYSHCLVLTSSGVVTC----THKENGCG--SD-PS--------QGVQSNLVQDSHTTITS 167
           G+ H +   SSG +         + G G  SD PS         G + +LV        +
Sbjct: 282 GWRHTMAADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTVA 341

Query: 168 LNSPGELYTWGNNEYGQMG 186
           +   G +Y+WG    GQ+G
Sbjct: 342 VTEGGRVYSWGRGVNGQLG 360



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 96/232 (41%), Gaps = 55/232 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+A+  CG V +WG    GQLG   AD+     PK +  L    +     G  + +
Sbjct: 21  GSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLA--PKAISTLTDAGIESVVCGAEYTI 78

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +  +            G+V++WG    G+LG    D     +P+ ++  +   V +   
Sbjct: 79  AVAPSR-----------GQVYSWGWGDFGRLG--HGDCNDVFVPRPIEFFSGRPVHRVAC 125

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H LV+                                         GEL+T+G N+ 
Sbjct: 126 GDTHTLVVAGE--------------------------------------GELFTFGRNQN 147

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
           GQ+G+ ++N  ++ PQ V +L    +  +ACG+ HS   ++S   ++++G G
Sbjct: 148 GQLGLGHTNDCLS-PQLVVALQGERVRSVACGSEHSLAATES-GTVFSWGWG 197



 Score = 52.0 bits (123), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 16/96 (16%)

Query: 1   MTGLW-HSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKGLASVSVVQACAGY 58
           + G W H++A +  G ++ WG +  GQLGL +S+D+ S   P  V G        A AG 
Sbjct: 279 VAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSDRPS---PVLVGG--------ALAGQ 327

Query: 59  SHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLG 94
              LV   T G  H++A+ + G V++WG   +GQLG
Sbjct: 328 RVSLV---TCGWRHTVAVTEGGRVYSWGRGVNGQLG 360


>gi|389640373|ref|XP_003717819.1| ubiquitin-protein ligase E3A [Magnaporthe oryzae 70-15]
 gi|351640372|gb|EHA48235.1| ubiquitin-protein ligase E3A [Magnaporthe oryzae 70-15]
 gi|440466349|gb|ELQ35621.1| ubiquitin-protein ligase E3A [Magnaporthe oryzae Y34]
 gi|440487873|gb|ELQ67638.1| ubiquitin-protein ligase E3A [Magnaporthe oryzae P131]
          Length = 1365

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 102/194 (52%), Gaps = 23/194 (11%)

Query: 899  GRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQ 958
            G+ +  + FYM  L    ++  D+  W + R   S     C YPF+    AK  +LE D 
Sbjct: 898  GQLLPTSDFYM-ALLDNSELTQDFEAWETKRAKFS----FCQYPFLLSVWAKIQILEHDA 952

Query: 959  RIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTN---DFKKP 1015
            + +M+       F   +      + +QYL + V RD +VED+++ +++   +   D KK 
Sbjct: 953  KREMDKKARDAFFNSIMSR---RSFDQYLYLNVRRDCLVEDSLKAVSEVIGSGGEDIKKG 1009

Query: 1016 LKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFS 1075
            L++             FRGEE  DAGG+R+E+ +LL++E+ +P +G+F   +++   +F+
Sbjct: 1010 LRIT------------FRGEEGVDAGGLRKEWFLLLVREVFNPDHGLFVYDDDSHYCYFN 1057

Query: 1076 EDTFEDQNMYFLIG 1089
             ++FE  + YFL+G
Sbjct: 1058 PNSFETSDQYFLVG 1071



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 17/98 (17%)

Query: 732  WFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL-------------DEPI 778
            +F+ ++FE  +  FL+G + GLAIYN TI+++ FP  L++K+L               P 
Sbjct: 1055 YFNPNSFETSDQYFLVGVVFGLAIYNSTILDVAFPPFLFRKLLAASPQPSGASPAHSRPP 1114

Query: 779  L---LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            +   L+DL +  P LAK L+ +L++ E D+E+ F + F
Sbjct: 1115 MTYTLEDLAEFHPMLAKGLRQLLEF-EGDVEETFCLDF 1151


>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
           [Desmodus rotundus]
          Length = 511

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 98/231 (42%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV   A    C 
Sbjct: 146 GSYHSLVLTSDGEVFAWGCNNSGQVG--SGSTANQPIPRRVTGCLQNRVVVNIACGQMC- 202

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ D GEV+ WG + +GQLGL S+   + S P R+  L  + V +   
Sbjct: 203 ----------SMAVVDSGEVYVWGYNGNGQLGLGSSG--NHSTPCRIAALQGIRVQRVAC 250

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 251 GYAHTLVLTDD--------------------------------------GQVYAWGANSY 272

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 273 GQLGTGNKSNQSYPTPVVVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 321



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 43/182 (23%)

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
           + +ND  E+F  G +  G LGL   D +S   P+R+  L+   +  AC  Y         
Sbjct: 47  MTVND--EIFVLGTNCCGCLGL--GDIQSTIEPRRLDSLSGKKI--ACLSY--------- 91

Query: 134 GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                       GS P               I    + GE++TWG+N Y Q+G   +N  
Sbjct: 92  ------------GSGPH--------------IVLATTEGEVFTWGHNAYNQLGNGTTNHG 125

Query: 194 VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
                   +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  + ++  P+ +
Sbjct: 126 SVPCHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGCNNSGQVGSGSTANQPIPRRV 184

Query: 253 HG 254
            G
Sbjct: 185 TG 186


>gi|402072990|gb|EJT68643.1| ubiquitin-protein ligase E3A [Gaeumannomyces graminis var. tritici
            R3-111a-1]
          Length = 1222

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 25/195 (12%)

Query: 899  GRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQ 958
            G+ +  + FYM  L    D+  D+  W S R     R   C YPF+    AK  +LE D 
Sbjct: 772  GQLLPTSDFYM-TLLDDSDLMTDFEAWESRR----GRFSFCQYPFLLSIWAKIQILEHDA 826

Query: 959  RIQMEHAMNQTNFYLFLQTFNPHTL-NQYLEVEVSRDNIVEDTIRELAQYTTN---DFKK 1014
            + QM           F  T   H +  QYL + V RD +VED++R +++   +   D KK
Sbjct: 827  KRQMSKKARDA----FFDTLMGHGMFEQYLNLTVRRDCLVEDSLRAVSEVIGSGGEDIKK 882

Query: 1015 PLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWF 1074
             +++             F+GEE  DAGG+R+E+ +LL++E+ +P +G+F   +++   +F
Sbjct: 883  GIRIT------------FKGEEGVDAGGLRKEWFLLLVREVFNPDHGLFIYDDDSHFCYF 930

Query: 1075 SEDTFEDQNMYFLIG 1089
            +  +FE  + YFL+G
Sbjct: 931  NPYSFETSDQYFLVG 945



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 17/98 (17%)

Query: 732  WFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPIL------------ 779
            +F+  +FE  +  FL+G + GLAIYN TI+++  P   ++K+L    +            
Sbjct: 929  YFNPYSFETSDQYFLVGVVLGLAIYNSTILDIALPPFAFRKLLAAAPMPAKSASTHPRTI 988

Query: 780  ----LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                L DL +  P LA+ L+ +L+Y + D+E  F + F
Sbjct: 989  MTYTLDDLAEFRPRLARGLRQLLEY-DGDVESTFCLDF 1025


>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 700 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 756

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 757 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 805

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
           G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 806 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 863

Query: 170 ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 864 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 916



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 1691 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 1744

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 1745 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 1796

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 1797 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 1856

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 1857 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 1912



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 647 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 704

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
             LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 705 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 750

Query: 122 AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
            G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 751 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 810

Query: 167 -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 811 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 868

Query: 226 SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
            ++YA+G      Q +   +V++ P L+ G
Sbjct: 869 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 898



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
           G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 604 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 652

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 653 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 710

Query: 134 GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
           G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 711 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 769

Query: 177 WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
           WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 770 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 827

Query: 237 VQLDSPKSVH-KTPQLIHG 254
            +L     VH + PQ++ G
Sbjct: 828 FRLGHGSDVHVRKPQVVEG 846



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 1538 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 1594

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 1595 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 1654

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 1655 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 1712

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 1713 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 1772

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 1773 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 1830

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 1831 RRPRQVQGLQGKKVIAIATG 1850



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
           +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 553 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 603

Query: 75  ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 604 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 657

Query: 133 SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
            G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 658 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 711

Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
           ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 712 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 760



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57  GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
           G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 531 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 586

Query: 117 VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
           VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 587 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 646

Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                 T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 647 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 705

Query: 220 VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
            L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 706 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 762

Query: 267 EDSLVSHSGGLVVKKIYSGG 286
           ++ LV   G     K+  GG
Sbjct: 763 DEGLVFSWGDGDFGKLGRGG 782



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 16/135 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G   SLAL   G V+TWG   + +LG  S     +  P+ V+GL    +V    G  HCL
Sbjct: 806 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK--PQVVEGLRGKKIVHVAVGALHCL 863

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 864 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 909

Query: 123 GYSHCLVLTSSGVVT 137
           G SH +  T+  V T
Sbjct: 910 GSSHSVAWTTVDVAT 924


>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
           paniscus]
 gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
           [Gorilla gorilla gorilla]
 gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
          Length = 556

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 97/231 (41%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV          
Sbjct: 165 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTVNQPIPRRVTGCLQNKVV---------- 212

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T   G    +A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L  + V +   
Sbjct: 213 -VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGL--GNSGNQPTPCRVAALQGIRVQRVAC 269

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT  G                                      ++Y WG N Y
Sbjct: 270 GYAHTLVLTDEG--------------------------------------QVYAWGANSY 291

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 292 GQLGTGNKSNQSYPTPVTVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L    +  AC  Y           
Sbjct: 68  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGKKI--ACLSY----------- 110

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE++TWG+N Y Q+G   +N  + 
Sbjct: 111 ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNHGLV 146

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  +V++  P+ + G
Sbjct: 147 PCHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG 205


>gi|307168941|gb|EFN61827.1| Ubiquitin-protein ligase E3A [Camponotus floridanus]
          Length = 866

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 95/193 (49%), Gaps = 26/193 (13%)

Query: 902  VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQ 961
            + +T FY   L+   ++  D+  + S  P   +     NY F+     KT  L  D RI+
Sbjct: 435  IPFTDFYNEPLSDAIEMDKDFAYYKSEEPMKFS---FMNYAFVLTPATKTLGLYYDNRIR 491

Query: 962  M--EHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIREL---AQYTTNDFKKPL 1016
            M  E  M+      FLQT      N YL ++V RD++++D + EL   A    +D KK L
Sbjct: 492  MYSERRMS------FLQTVVGQPTNPYLRLKVRRDHLIDDALVELEMVAMENPSDLKKQL 545

Query: 1017 KVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSE 1076
             V            +F GE+  D GGV +EF  L+++EI +P YGMF   E+T+  WF+ 
Sbjct: 546  VV------------EFEGEQGVDEGGVSKEFFQLVVEEIFNPDYGMFTTQEDTQMTWFNP 593

Query: 1077 DTFEDQNMYFLIG 1089
             +FE    + LIG
Sbjct: 594  TSFESDAQFTLIG 606



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 62/99 (62%), Gaps = 1/99 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T  E+T+  WF+  +FE      LIG + GLAIYN  I+++ FP+ +Y+K+L    
Sbjct: 577 YGMFTTQEDTQMTWFNPTSFESDAQFTLIGIVLGLAIYNNVILDVRFPMVVYRKLLGRKG 636

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
              DL+D SPTL ++++++++Y   D+ + F  TFR  Y
Sbjct: 637 AFADLEDWSPTLYRTMKELMEYTGDDMPETFMQTFRVGY 675


>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Papio anubis]
          Length = 551

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 98/231 (42%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     V           
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTVNQPIPRRVTGCLQNKV----------- 206

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V+T   G    +A+ D GEV+ WG + +GQLGL S+   +Q  P RV  L  + V +   
Sbjct: 207 VVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSG--NQPTPCRVAALQGIRVQRVAC 264

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 265 GYAHTLVLTDE--------------------------------------GQVYAWGANSY 286

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 287 GQLGTGNKSNQSYPTPVTVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 2/86 (2%)

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           + GE++TWG+N Y Q+G   +N  +   Q   +L N  +  +ACG+ HS VL+ S   ++
Sbjct: 116 TEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLT-SDGEVF 174

Query: 230 AFGIGSAVQLDSPKSVHK-TPQLIHG 254
           A+G  ++ Q+ S  +V++  P+ + G
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTG 200


>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Nomascus leucogenys]
          Length = 556

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 97/231 (41%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV          
Sbjct: 165 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTVNQPIPRRVTGCLQNKVV---------- 212

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T   G    +A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L  + V +   
Sbjct: 213 -VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGL--GNSGNQPTPCRVAALQGIRVQRVAC 269

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT  G                                      ++Y WG N Y
Sbjct: 270 GYAHTLVLTDEG--------------------------------------QVYAWGANSY 291

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 292 GQLGTGNKSNQSYPTPVTVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L    +  AC  Y           
Sbjct: 68  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGKKI--ACLSY----------- 110

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE++TWG+N Y Q+G   +N  + 
Sbjct: 111 ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNHGLV 146

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  +V++  P+ + G
Sbjct: 147 PCHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG 205


>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
           africana]
          Length = 551

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/233 (32%), Positives = 102/233 (43%), Gaps = 60/233 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQ-ACAGYSH 60
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G L + +VV  AC     
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKAVVNIAC----- 212

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                   G   S+A+ D GEV+ WG + +GQLGL S+   +Q  P RV  L  + V + 
Sbjct: 213 --------GQMCSMAVVDAGEVYVWGYNGNGQLGLGSSG--NQPTPCRVAALQGIHVQRV 262

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
             GY+H LVLT                                        G++Y WG N
Sbjct: 263 ACGYAHTLVLTDE--------------------------------------GQVYAWGAN 284

Query: 181 EYGQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
            YGQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 285 SYGQLGTGNKSNQSYPTPISVEK--DRIIEIAACHSTHTSAAKTQGGNVYMWG 335



 Score = 48.5 bits (114), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 41/175 (23%)

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
           E+F  G +  G LGL   D +S   P+R+  L+   +  AC  Y                
Sbjct: 66  EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGKKI--ACLSY---------------- 105

Query: 141 KENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRV 200
                GS P               I    + GE++TWG+N Y Q+G   +N  +      
Sbjct: 106 -----GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCYIS 146

Query: 201 ESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
            +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  + ++  P+ + G
Sbjct: 147 TNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG 200


>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
          Length = 5093

 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 108/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3368 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3424

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3425 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3473

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3474 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3531

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V  L    I  +ACG++HS  
Sbjct: 3532 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVHGLEGQKITRVACGSSHSVA 3584



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 4357 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 4410

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4411 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4462

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4463 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4522

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4523 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4578



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 123/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3315 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3372

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3373 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3418

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3419 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3478

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3479 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3536

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+HG
Sbjct: 3537 GQVYAWGDNDHGQQGNGTTTVNRKPTLVHG 3566



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 767 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISTFSGKQAGKHVVHI--- 817

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 818 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVA--- 870

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 871 --------------------CGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 897

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 898 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 955

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 956 EHVRYPKLLEG 966



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 121/259 (46%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP++V  L+S  VV+  A +S         G  H+
Sbjct: 3272 GKVYACGEATNGRLGL-GLSSGTVPIPRQVTALSSY-VVKKVAVHS---------GGRHA 3320

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3321 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3378

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3379 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3437

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3438 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3495

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3496 FRLGHGSDVHVRKPQVVEG 3514



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 820  GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 872

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 873  -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 925

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
            G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 926  GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 985

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
                E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 986  TEDSEVHSWGSNDQCQH-FDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFAWS 1038



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 129/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 4204 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4260

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4261 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4320

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + V    AG +H   +T++G + T     
Sbjct: 4321 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGR 4378

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4379 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4438

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4439 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4496

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4497 RRPRQVQGLQGKKVIAIATG 4516



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 3221 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3271

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP++V  L+S  V  V   +G  H   LT 
Sbjct: 3272 -----GKVYACGEATNGRLGL-GLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTV 3325

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3326 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3379

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3380 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3428



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 111/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+    +GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 3199 GSSGSLIRKKPSGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 3254

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 3255 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVH 3314

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3315 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3373

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3374 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3430

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3431 DEGLVFSWGDGDFGKLGRGG 3450



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3474 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3531

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V GL    + +   
Sbjct: 3532 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVHGLEGQKITRVAC 3577

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3578 GSSHSVAWTTVDVAT 3592



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 745 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 789

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 790 -HGDTVPLEEPKVISTFSGKQAGKHVVHI----------------ACGS----------- 821

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 822 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 876

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 877 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 913


>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 447

 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 126/278 (45%), Gaps = 52/278 (18%)

Query: 2   TGLWHSLALNDCGEVFTWG-GDTH----GQLGLESADKKSQSIPKRVKGLASVSVVQACA 56
            GL+HSL     G + ++G G  +    G+LG    D+++Q IP+ V  L+ V +V+  A
Sbjct: 116 AGLYHSLVATKDGGLLSFGYGSANVVVDGRLG--HGDQRTQMIPRPVLSLSGVRIVKVAA 173

Query: 57  GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
           G  H LVL+            D G VF++G    G LG    D+  Q +PK +  L    
Sbjct: 174 GAHHSLVLS------------DQGNVFSFGVGIDGSLG--HGDQARQLVPKLISSLQREK 219

Query: 117 VVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQG----------------VQSNLVQ- 159
           VV   AG +H LV+  SG V       G GS+ + G                VQ   V+ 
Sbjct: 220 VVDIAAGSAHSLVVAESGDVYSF----GLGSEGALGHGDTDMSLVPKKIEHFVQRPAVKV 275

Query: 160 ---DSHTTITS----LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIA 212
               SH+ + S    L   G + ++G N YGQ+G+ + +  +  P +V+  V      I 
Sbjct: 276 AAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLGHFSRMIASPAQVQ--VEAAAVEIE 333

Query: 213 CGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQ 250
            GA+HS VL+    R+Y+FG+    QL     +   P+
Sbjct: 334 AGAHHSLVLTND-GRVYSFGLAQHGQLGHGNDLRDNPE 370



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 114/258 (44%), Gaps = 38/258 (14%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HSL L+D G VF++G    G LG    D+  Q +PK +  L    VV   AG +H 
Sbjct: 173 AGAHHSLVLSDQGNVFSFGVGIDGSLG--HGDQARQLVPKLISSLQREKVVDIAAGSAHS 230

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           LV+             + G+V+++G  + G LG    D     +PK+++       V+  
Sbjct: 231 LVVA------------ESGDVYSFGLGSEGALG--HGDTDMSLVPKKIEHFVQRPAVKVA 276

Query: 122 AGYSHCLVLT-----------------SSGVVTCTHKENGCGSDPSQGVQSNLVQ---DS 161
           AG SH LVL+                 S G +   H      S     V++  V+    +
Sbjct: 277 AGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLGHFSRMIASPAQVQVEAAAVEIEAGA 336

Query: 162 HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
           H ++  L + G +Y++G  ++GQ+G  N      +P  ++SL    I  +A G N S VL
Sbjct: 337 HHSLV-LTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERERIVDVAAGNNFSLVL 395

Query: 222 SKSVSRLYAFGIGSAVQL 239
           S     +++FG G   +L
Sbjct: 396 SAE-GTVFSFGCGKNGRL 412



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 96/226 (42%), Gaps = 43/226 (19%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDT---HGQLGLE 96
           PK V+ LA   V    AG  H LV T   GL            F +G       G+LG  
Sbjct: 100 PKCVEALARERVRDVSAGLYHSLVATKDGGLLS----------FGYGSANVVVDGRLG-- 147

Query: 97  SADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN 156
             D+++Q IP+ V  L+ V +V+  AG  H LVL+  G V       G G D S G    
Sbjct: 148 HGDQRTQMIPRPVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSF----GVGIDGSLGHGDQ 203

Query: 157 LVQDSHTTITSLN------------------SPGELYTWGNNEYGQMGINNSNTTVTKPQ 198
             Q     I+SL                     G++Y++G    G +G  +++ ++  P+
Sbjct: 204 ARQLVPKLISSLQREKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDMSLV-PK 262

Query: 199 RVESLVNLPIALIACGANHSFVLSK-----SVSRLYAFGIGSAVQL 239
           ++E  V  P   +A G +HS VLSK        R+ +FG  S  QL
Sbjct: 263 KIEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQL 308


>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
            harrisii]
          Length = 4483

 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 2859 GSSHSAAITSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 2915

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 2916 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 2964

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G G+D     P   +G++   +   H  + +L+  
Sbjct: 2965 GAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3022

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3023 AVTDTGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3075



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 106/237 (44%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG    D + Q  PK V+ L    V+    G    
Sbjct: 3852 AGGAHSACITAAGDLYTWGKGRYGRLG--HGDSEDQLKPKLVEALQGYRVIDIACG---- 3905

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 3906 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 3957

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 3958 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4017

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    I  +ACG+ H+   S S
Sbjct: 4018 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKINRVACGSAHTLAWSTS 4073



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++AL   G++F+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 2806 SGGRHAMALTVDGKIFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 2863

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 2864 AAITSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 2909

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 2910 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 2969

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + ++  V KPQ VE L    I  +A GA H   ++ + 
Sbjct: 2970 LALTKSGVVWTWGKGDYFRLG-HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDT- 3027

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3028 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3057



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L++  VV+  A +S         G  H+
Sbjct: 2763 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSNY-VVKKVAVHS---------GGRHA 2811

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL   G++F+WG    G+LG  S  + +   P+ ++ L +  +     G SH   +TSS
Sbjct: 2812 MALTVDGKIFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 2869

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 2870 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 2928

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 2929 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 2986

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 2987 FRLGHGTDVHVRKPQVVEG 3005



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 129/323 (39%), Gaps = 73/323 (22%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  +Q   G      +T
Sbjct: 3699 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALAALRPIQLIGGEQTLFAVT 3755

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 3756 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3815

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G +    K  
Sbjct: 3816 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGR 3873

Query: 144  ----GCGSDPSQGVQSNLVQ---------------DSHTTITSLNSPGELYTWGNNEYGQ 184
                G G    Q ++  LV+               D+ T    L     +++WG+ +YG+
Sbjct: 3874 YGRLGHGDSEDQ-LKPKLVEALQGYRVIDIACGSGDAQTLC--LTDDDTVWSWGDGDYGK 3930

Query: 185  MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
            +G   S+     P +++SL  L +  + CG+  S  L+KS   +Y +G G   +L     
Sbjct: 3931 LGRGGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKS-GAVYTWGKGDYHRLGHGSD 3988

Query: 245  VH-KTPQLIHGPWIASPVAMTAG 266
             H + P+ + G      +A+  G
Sbjct: 3989 DHVRRPRQVQGLQGKKVIAIATG 4011



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 99/228 (43%), Gaps = 40/228 (17%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2712 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 2762

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L++  V  V   +G  H + LT 
Sbjct: 2763 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTV 2816

Query: 133  SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN------------------SPGEL 174
             G +       G G D   G  S +  D    I +L                   S GEL
Sbjct: 2817 DGKIFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 2872

Query: 175  YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            YTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 2873 YTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2919



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG    D   +  P+ V+GL    +V    G  HCL
Sbjct: 2965 GAQFSLALTKSGVVWTWGKGDYFRLG-HGTDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3022

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3023 AVT------------DTGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3068

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3069 GSSHSVAWTTVDVAT 3083



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 100/236 (42%), Gaps = 36/236 (15%)

Query: 81   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCT 139
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T  G V  C 
Sbjct: 2712 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 2769

Query: 140  HKENG-CGSDPSQG---------------VQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
               NG  G   S G               V+   V        +L   G++++WG  + G
Sbjct: 2770 EATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDG 2829

Query: 184  QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD--- 240
            ++G + S     KP+ +E+L    I  IACG++HS  ++ S   LY +G+G   +L    
Sbjct: 2830 KLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS-GELYTWGLGEYGRLGHGD 2887

Query: 241  -----SPKSV-----HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
                  PK V     H+  Q+  G   A  +A+T  ++ LV   G     K+  GG
Sbjct: 2888 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT--DEGLVFSWGDGDFGKLGRGG 2941



 Score = 50.1 bits (118), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 17/150 (11%)

Query: 106 PKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTI 165
           P + +GLA++ + Q        L+L+ +G V          SD   GV           +
Sbjct: 357 PIQCEGLANLGITQIACAEKRFLILSRNGRVYM----QAYNSDTLVGV---------VAV 403

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            SL   G++++WG+ +YG++G   S+   T P+ +E L +L +  + CG+  S  L+K  
Sbjct: 404 FSLIF-GQVWSWGDGDYGKLGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSVALTKD- 460

Query: 226 SRLYAFGIGSAVQLDSPKSVH-KTPQLIHG 254
            ++Y++G G   +L      H + P+L+ G
Sbjct: 461 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEG 490


>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4588

 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 114/235 (48%), Gaps = 38/235 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS A+ + GE++TWG    G+LG   +D +S++ P  VK ++ V  V AC G SH +
Sbjct: 485 GYRHSAAVTNDGELYTWGEGDFGRLG--HSDSQSRNTPTLVKDISGVGQV-AC-GSSHTI 540

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +             D   ++++GG  +G+LG    D      PK ++ L    + + CA
Sbjct: 541 AVA-----------QDGRTMWSFGGGDNGKLG--HGDTNRVYRPKVIEALHGFIIRKVCA 587

Query: 123 GYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQD-SHTTIT--------- 166
           G    L LTS+G V      +C     GCGS  +  ++   V+D S T I          
Sbjct: 588 GSQSSLALTSAGQVFAWGCGSCL----GCGSSETTSLRPRFVEDLSITKIIDISCGDSHC 643

Query: 167 -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
            +L+   E+Y WGNN  GQ G  +++T +T+P++V  L  + I  I  G +HS  
Sbjct: 644 LALSHENEVYAWGNNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLA 698



 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 108/248 (43%), Gaps = 56/248 (22%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG    G+LG    + + Q  PK+++ L    VVQ   G+ H  V+T
Sbjct: 3777 HSMALTETGEVFSWGDGDFGKLG--HGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVT 3834

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            +             G++FT+G    G+LG  S   K Q  P+RV  L    V Q   G +
Sbjct: 3835 AD------------GKLFTFGSGESGRLGQRSTSNKMQ--PERVAALEGYHVGQVSCGLN 3880

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H LVL+  G+                                      ++ +G+ +YG++
Sbjct: 3881 HTLVLSLDGMA-------------------------------------VWAFGDGDYGKL 3903

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL-DSPKS 244
            G   S+T    PQ+VE L N  +  + CGA  S VL+     +Y FG    + L DS   
Sbjct: 3904 GA-GSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATD-GHVYTFGQERLIGLPDSMLK 3961

Query: 245  VHKTPQLI 252
                PQ++
Sbjct: 3962 NRSNPQVV 3969



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 104/241 (43%), Gaps = 52/241 (21%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S  +   G V   G   +G+LG  ++D            L   +++ A  GY    ++TS
Sbjct: 3723 SFLIQSNGAVMAVGEGQYGRLGQGNSDD-----------LFVPTIISAFQGYVVTQLVTS 3771

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
                 HS+AL + GEVF+WG    G+LG    + + Q  PK+++ L    VVQ   G+ H
Sbjct: 3772 CGSDGHSMALTETGEVFSWGDGDFGKLG--HGNNERQRRPKQIEALQGEDVVQLACGFRH 3829

Query: 127  CLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG 186
              V+T+                                       G+L+T+G+ E G++G
Sbjct: 3830 SAVVTAD--------------------------------------GKLFTFGSGESGRLG 3851

Query: 187  INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH 246
               S +   +P+RV +L    +  ++CG NH+ VLS     ++AFG G   +L +  S  
Sbjct: 3852 -QRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSSTA 3910

Query: 247  K 247
            K
Sbjct: 3911 K 3911



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 73/290 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G + + +++  G V   G  ++G+LGL   D  +QS+PK++      ++ +         
Sbjct: 377 GQYCTFSVSTDGSVKACGKGSYGRLGL--GDSNNQSMPKKLVLEPHRNIKK--------- 425

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQAC 121
           V +S     H+LA+   GEVF+WG   +G+LG    +  +Q  PK V+G L S  VV A 
Sbjct: 426 VFSSKGSDGHTLAITVDGEVFSWGDGEYGKLG--HGNSATQKYPKIVQGPLFSKIVVSAS 483

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
           AGY H   +T+ G                                      ELYTWG  +
Sbjct: 484 AGYRHSAAVTNDG--------------------------------------ELYTWGEGD 505

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           +G++G ++S +  T P  V+ +    +  +ACG++H+  +++    +++FG G     D+
Sbjct: 506 FGRLGHSDSQSRNT-PTLVKDISG--VGQVACGSSHTIAVAQDGRTMWSFGGG-----DN 557

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
            K  H     ++ P +   +              G +++K+ +G   S+ 
Sbjct: 558 GKLGHGDTNRVYRPKVIEALH-------------GFIIRKVCAGSQSSLA 594



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 117/262 (44%), Gaps = 35/262 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G    G+LG  S   K Q  P+RV  L    V Q   G +H L
Sbjct: 3826 GFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMQ--PERVAALEGYHVGQVSCGLNHTL 3883

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            VL+            D   V+ +G   +G+LG  S+  K    P++V+ L +  + + C 
Sbjct: 3884 VLSL-----------DGMAVWAFGDGDYGKLGAGSSTAK--YYPQKVEQLCNKGMKKVCC 3930

Query: 123  GYSHCLVLTSSGVVTCTHKENGCG---------SDPS-----QGVQSNLVQDSHTTITSL 168
            G    +VL + G V    +E   G         S+P      +G+    +      + +L
Sbjct: 3931 GAQFSVVLATDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLAL 3990

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK-SVSR 227
            +S G++Y WG N  GQ+G+ + N  V +P  + +L    I  I+ G  HS   +  S S+
Sbjct: 3991 SSTGDIYAWGCNSEGQLGLGHCN-LVKEPTLITALQGKNIKQISAGRCHSSAWTAPSTSK 4049

Query: 228  LYAF----GIGSAVQLDSPKSV 245
              A     G   +VQL  P+SV
Sbjct: 4050 NSALCPCQGGPGSVQLGLPQSV 4071



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 63/130 (48%), Gaps = 16/130 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G   SLAL   G+VF WG  +   LG  S++  S   P+ V+ L+   ++    G SHCL
Sbjct: 588 GSQSSLALTSAGQVFAWGCGSC--LGCGSSETTSLR-PRFVEDLSITKIIDISCGDSHCL 644

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                       AL+   EV+ WG +T GQ G +       + PK+V GL  VS+ Q  A
Sbjct: 645 ------------ALSHENEVYAWGNNTMGQCG-QGHTSTPITRPKKVLGLEGVSIQQITA 691

Query: 123 GYSHCLVLTS 132
           G SH L  T+
Sbjct: 692 GTSHSLAWTA 701



 Score = 40.8 bits (94), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 14/114 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  H LAL+  G+++ WG ++ GQLGL   +   +  P  +  L   ++ Q  AG  H  
Sbjct: 3983 GCEHVLALSSTGDIYAWGCNSEGQLGLGHCNLVKE--PTLITALQGKNIKQISAGRCHSS 4040

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
              T+ +   +S AL  C      GG    QLGL       QS+P +   L  +S
Sbjct: 4041 AWTAPSTSKNS-ALCPCQ-----GGPGSVQLGL------PQSVPPQYNTLKDLS 4082


>gi|255940928|ref|XP_002561233.1| Pc16g09150 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211585856|emb|CAP93585.1| Pc16g09150 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1195

 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 29/222 (13%)

Query: 877  LTSSISAGGRTVSNIRT------PAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRP 930
             T++ISA  R+    R+      P P  G  +  + FY   L    D+  D+  W +   
Sbjct: 716  FTANISATRRSDGTPRSLEMPKNPGPRHGHMIPISTFYN-TLLDYSDLVTDFETWEAK-- 772

Query: 931  NGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVE 990
              S++   C YPF+    AK  ++E D R QME          F    N   ++QYL ++
Sbjct: 773  --SSKFTFCQYPFLLSIWAKIHIMEHDARRQMEVKARDA---FFNSVLNQAAVSQYLVLK 827

Query: 991  VSRDNIVEDTIR---ELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREF 1047
            V R+ ++ED+++   E+      + KK L++            +F GEE  DAGG+R+E+
Sbjct: 828  VRRECLIEDSLKGVSEVVGTGQEEIKKGLRI------------EFSGEEGIDAGGLRKEW 875

Query: 1048 LMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             ++L++E+ DP +G+F   ++++  +F+   FE    +FL+G
Sbjct: 876  FLMLVREVFDPLHGLFIYDDDSQYCYFNPYCFESSEQFFLVG 917



 Score = 49.7 bits (117), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 18/105 (17%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP-------- 777
           ++++  +F+   FE     FL+G L GLAIYN TI+++  P   +KK+L           
Sbjct: 895 DDSQYCYFNPYCFESSEQFFLVGVLLGLAIYNSTILDVDLPPFAFKKLLSSAPYSNGPQA 954

Query: 778 ---------ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                      L+DL +  PTLAK L+ +L++ E ++ + F   F
Sbjct: 955 ATSLRSTFKCTLEDLAEYRPTLAKGLRGLLEF-EGNVAETFCYDF 998


>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
            glaber]
          Length = 3493

 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 130/294 (44%), Gaps = 82/294 (27%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G+ H  V+T
Sbjct: 2718 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 2775

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA----- 120
            S             G++FT+G   +G+LGL +   K   +P+RV  L    + QA     
Sbjct: 2776 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQAWNKSY 2821

Query: 121  --CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWG 178
                G +H L +++ G +                                     ++ +G
Sbjct: 2822 SVACGLNHTLAVSTDGSM-------------------------------------VWAFG 2844

Query: 179  NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
            + +YG++G+ NS T  + PQ+V+ L  + I  +ACG   S  L+K    +Y FG    + 
Sbjct: 2845 DGDYGKLGLGNS-TAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIG 2902

Query: 239  LDSPKSV-HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
            L   ++  H  PQ +  P +A                 G+V++ +  G +H++ 
Sbjct: 2903 LPEGRARNHNRPQQV--PVLA-----------------GVVIEDVAVGAEHTLA 2937



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 116/259 (44%), Gaps = 27/259 (10%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC-AGYSHC 61
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L    + QA    YS  
Sbjct: 2767 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQAWNKSYS-- 2822

Query: 62   LVLTSTTGLWHSLALN-DCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                   GL H+LA++ D   V+ +G   +G+LGL ++  KS   P++V  L  + + + 
Sbjct: 2823 ----VACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSS--PQKVDVLCGIGIKKV 2876

Query: 121  CAGYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNLVQDSHTTIT 166
              G    + LT  G V    ++   G         + P Q     GV    V        
Sbjct: 2877 ACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTL 2936

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L S G++Y WG+N  GQ+G+ ++N  V +P  V  L    I  I+ G  HS   +    
Sbjct: 2937 ALASTGDVYAWGSNSEGQLGLGHTN-HVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPV 2995

Query: 227  RLYAFGIGSAVQLDSPKSV 245
               A G+   +QL  P +V
Sbjct: 2996 PPRAPGVSVPLQLGLPDAV 3014


>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
           CCMP2712]
          Length = 316

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 44/277 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL HS  +   GEV  WG + +GQ G  + ++     P  V  L  V+ +    G +H +
Sbjct: 37  GLVHSAMVMGSGEVLCWGENKYGQCGTGTQEQTEH--PTFVGSLFGVACMSVSCGGAHTV 94

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V++              G VF+WG   +GQLG  S D  + + P  V+ +    V+    
Sbjct: 95  VVSED------------GRVFSWGLGANGQLGHGSRD--NLTTPSVVQAMRGRDVLAVTC 140

Query: 123 GYSHCLVLTSSG-VVTCTHKENG-CG--------------SDPSQGVQSNLVQDSHTTIT 166
           G  H +++ + G + TC   +NG CG              S   +GVQ       HT + 
Sbjct: 141 GVGHTVIVLAGGELYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEGVQHASCGAGHTAVV 200

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +    GE++T+G+   GQ+G  +    ++ P+RV +LV + ++++ACG  ++ V +    
Sbjct: 201 T--GGGEVFTFGSGSCGQLGHGDCQ-DLSMPRRVGALVGIVMSMVACGEEYT-VCAAFDH 256

Query: 227 RLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAM 263
           R++ FG+ +  QL +  + H        P+++ P  M
Sbjct: 257 RVFGFGLNNVGQLGASSTSH--------PYLSEPRQM 285


>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
 gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
 gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Nomascus leucogenys]
 gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
           paniscus]
 gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
           [Gorilla gorilla gorilla]
 gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; Short=CHC1-L;
           AltName: Full=RCC1-like G exchanging factor; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
 gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Homo sapiens]
 gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
 gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
 gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_a [Homo sapiens]
 gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 97/231 (41%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV          
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTVNQPIPRRVTGCLQNKVV---------- 207

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T   G    +A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L  + V +   
Sbjct: 208 -VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGL--GNSGNQPTPCRVAALQGIRVQRVAC 264

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT  G                                      ++Y WG N Y
Sbjct: 265 GYAHTLVLTDEG--------------------------------------QVYAWGANSY 286

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 287 GQLGTGNKSNQSYPTPVTVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L    +  AC  Y           
Sbjct: 63  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGKKI--ACLSY----------- 105

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE++TWG+N Y Q+G   +N  + 
Sbjct: 106 ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNHGLV 141

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  +V++  P+ + G
Sbjct: 142 PCHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG 200


>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 551

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 97/231 (41%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV          
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTINQPIPRRVTGCLQNKVV---------- 207

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T   G    +A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L  + V +   
Sbjct: 208 -VTIACGQMCCMAVVDSGEVYVWGYNGNGQLGL--GNSGNQPTPCRVAALQGIRVQRVAC 264

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT  G                                      ++Y WG N Y
Sbjct: 265 GYAHTLVLTDEG--------------------------------------QVYAWGANSY 286

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 287 GQLGTGNKSNQSYPTPVTVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L+   +  AC  Y           
Sbjct: 63  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGKKI--ACLSY----------- 105

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE++TWG+N Y Q+G   +N  + 
Sbjct: 106 ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNHGLV 141

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  ++++  P+ + G
Sbjct: 142 PCHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTINQPIPRRVTG 200


>gi|400597901|gb|EJP65625.1| HECT-domain-containing protein [Beauveria bassiana ARSEF 2860]
          Length = 1189

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 103/194 (53%), Gaps = 23/194 (11%)

Query: 899  GRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQ 958
            G K+  + FY+  +    D+  D+  W + +   S     C YPF+    AKT++LE D 
Sbjct: 738  GHKLPSSEFYV-SMVDYIDLVKDFDTWEAKQGFFS----FCQYPFLLSLWAKTSILEYDT 792

Query: 959  RIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDT---IRELAQYTTNDFKKP 1015
            R QM+   N+    L     +  ++ QYL + V R+ +V+D+   + E+    T+D KK 
Sbjct: 793  RRQMQ---NKARAALIDSIMSNKSVQQYLTLTVRRECLVDDSLMAVSEVIGSGTDDIKKG 849

Query: 1016 LKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFS 1075
            L++            KFRGEE  D GG+R+E+  L+++++ +P  GMF   E+++  +F+
Sbjct: 850  LRI------------KFRGEEGIDGGGLRKEWFQLVIRDVFNPDCGMFLYDEDSQFCYFN 897

Query: 1076 EDTFEDQNMYFLIG 1089
             ++ E  + YFL+G
Sbjct: 898  PNSLESTDQYFLVG 911



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 21/115 (18%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDE--------- 776
           E+++  +F+ ++ E  +  FL+G + GLAIYN TI+++P P   +KK+L           
Sbjct: 889 EDSQFCYFNPNSLESTDQYFLVGVVLGLAIYNSTILDVPLPPFAFKKLLAAAPGHGMSSL 948

Query: 777 ----PIL---LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDY 824
               P L   L DL +  P LA+ LQ +L+Y + D+E  F + F    +L +D Y
Sbjct: 949 AHAPPHLKYTLDDLAEYRPRLARGLQQLLEY-DGDVESTFALDF----MLENDRY 998


>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
          Length = 527

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 97/231 (41%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV          
Sbjct: 136 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTVNQPIPRRVTGCLQNKVV---------- 183

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T   G    +A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L  + V +   
Sbjct: 184 -VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGL--GNSGNQPTPCRVAALQGIRVQRVAC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT  G                                      ++Y WG N Y
Sbjct: 241 GYAHTLVLTDEG--------------------------------------QVYAWGANSY 262

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 263 GQLGTGNKSNQSYPTPVTVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L    +  AC  Y           
Sbjct: 39  VND--EIFVLGTNCCGCLGL--GDVRSTIEPRRLDSLNGKKI--ACLSY----------- 81

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE++TWG+N Y Q+G   +N  + 
Sbjct: 82  ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNHGLV 117

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  +V++  P+ + G
Sbjct: 118 PCHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG 176


>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
          Length = 4817

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 110/231 (47%), Gaps = 33/231 (14%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS A+   G+++TWG   +G+LG    D  +Q  PK VK L    V+Q   G        
Sbjct: 3065 HSAAIISNGDLYTWGLGEYGRLG--HGDNTTQLRPKLVKALEGQRVIQVALGSRDA---- 3118

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                   +LAL D G V++WG    G+LG      +  S+P  ++ L  V V Q   G  
Sbjct: 3119 ------QTLALTDSGTVYSWGDGDFGKLG--RGGSEGCSVPHPIERLNGVGVCQIECGAQ 3170

Query: 126  HCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQD------SHTTITSLN-----S 170
              L LT SG V    K +    G G+D +   +  LV+       +H  + +L+      
Sbjct: 3171 FSLALTKSGQVWTWGKGDYFRLGHGTD-AHVRKPQLVETLKGKKVTHVAVGALHCLSVLD 3229

Query: 171  PGELYTWGNNEYGQMGINNSNTTVT-KPQRVESLVNLPIALIACGANHSFV 220
             G++Y WG+N++GQ G  NS TTV  KP  V+ L    I+ +ACG++HS  
Sbjct: 3230 NGQVYAWGDNDHGQQG--NSTTTVNRKPALVQGLEGCKISRVACGSSHSIA 3278



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 103/235 (43%), Gaps = 29/235 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   GE+++WG   +G+LG    D + Q+ PK V  L    V     G    
Sbjct: 4082 AGGAHSACITSTGELYSWGKGRYGRLG--HGDSEDQTKPKLVDALKGYRVTDVACG---- 4135

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L + D   V++WG   +G+LG   +D     +P ++  L  + V++  
Sbjct: 4136 ------SGDAQTLCITDDDSVWSWGDGDYGKLGRGGSD--GCKVPMKIDALQGLGVIKVE 4187

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITS 167
             G    + LT SG V    K +    G G++            QG +   +        +
Sbjct: 4188 CGSQFSVALTKSGAVYTWGKGDYHRLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVA 4247

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    I  +ACG+ HS   S
Sbjct: 4248 CTDAGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKINRVACGSAHSLAWS 4301



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 117/268 (43%), Gaps = 35/268 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H LAL+  GEV++WG    G+LG    ++     P+ ++ L    VV   AG +H 
Sbjct: 4030 SGGKHCLALSAEGEVYSWGEGEDGKLG--HGNRSPCDRPRAIESLRGKEVVDIAAGGAHS 4087

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-A 120
              +TST            GE+++WG   +G+LG    D + Q+ PK V  L    V   A
Sbjct: 4088 ACITST------------GELYSWGKGRYGRLG--HGDSEDQTKPKLVDALKGYRVTDVA 4133

Query: 121  C-AGYSHCLVLTSSGVVTC----------THKENGCGS----DPSQGVQSNLVQDSHTTI 165
            C +G +  L +T    V                +GC      D  QG+    V+      
Sbjct: 4134 CGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLGVIKVECGSQFS 4193

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G +YTWG  +Y ++G + +   + +P+R  +L    I  IACG+ H  V     
Sbjct: 4194 VALTKSGAVYTWGKGDYHRLG-HGTEDHIRRPRRCTTLQGKKIVSIACGSLHC-VACTDA 4251

Query: 226  SRLYAFGIGSAVQL-DSPKSVHKTPQLI 252
              +Y +G     QL D   +  + P+L+
Sbjct: 4252 GEVYTWGDNDEGQLGDGTTNAIQRPRLV 4279



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 123/271 (45%), Gaps = 37/271 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSH 60
            +G  H++AL   G+VF+WG    G+LG  S  + +   P+ ++ L S  V   AC G   
Sbjct: 3009 SGGRHAMALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALRSKRVRDIACGGS-- 3064

Query: 61   CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                       HS A+   G+++TWG   +G+LG    D  +Q  PK VK L    V+Q 
Sbjct: 3065 -----------HSAAIISNGDLYTWGLGEYGRLG--HGDNTTQLRPKLVKALEGQRVIQV 3111

Query: 121  CAGY--SHCLVLTSSGVVTC----------THKENGCGS----DPSQGVQSNLVQDSHTT 164
              G   +  L LT SG V                 GC      +   GV    ++     
Sbjct: 3112 ALGSRDAQTLALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGVCQIECGAQF 3171

Query: 165  ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              +L   G+++TWG  +Y ++G + ++  V KPQ VE+L    +  +A GA H   +  +
Sbjct: 3172 SLALTKSGQVWTWGKGDYFRLG-HGTDAHVRKPQLVETLKGKKVTHVAVGALHCLSVLDN 3230

Query: 225  VSRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
              ++YA+G      Q +S  +V++ P L+ G
Sbjct: 3231 -GQVYAWGDNDHGQQGNSTTTVNRKPALVQG 3260



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 101/237 (42%), Gaps = 33/237 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS A+   GE+FTWG  + G+LGL S +      P  V GL  V+VV    G     
Sbjct: 538 GSHHSAAITASGELFTWGRGSFGRLGLGSTEDI--LTPALVSGLLGVTVVDVACG----- 590

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   ++AL D G V++WG   +G+LG      +    PK V  L  + V +   
Sbjct: 591 -----SGDAQTIALADTGSVYSWGDGEYGKLG--RGGSEGCKAPKLVDKLQGLDVTRVYC 643

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNL--------VQDSHTTITSLNS---- 170
           G  +   +  +G V      NG G     G + ++        +   H T  SL S    
Sbjct: 644 GPQYSAAVCKNGAVFTWG--NGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHCL 701

Query: 171 ----PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
                GEL +WG N+ GQ+G  ++     +P    SL+   I  I C +  +F  S+
Sbjct: 702 ATTEEGELLSWGRNDKGQLGEGHTGLKA-EPAFAASLLGKCIIGITCSSAQTFAWSR 757



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 54/234 (23%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL   G+V++WG    G+LG    D  +   P  +  L   SVV    G SH     
Sbjct: 489 HCLALTSEGDVYSWGNGDFGKLG--HGDTVTCDSPMLINELHGKSVVNVACG-SH----- 540

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 HS A+   GE+FTWG  + G+LGL S +      P  V GL  V+VV       
Sbjct: 541 ------HSAAITASGELFTWGRGSFGRLGLGSTEDI--LTPALVSGLLGVTVVDV----- 587

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CGS  +Q +             +L   G +Y+WG+ EYG++
Sbjct: 588 ------------------ACGSGDAQTI-------------ALADTGSVYSWGDGEYGKL 616

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           G   S      P+ V+ L  L +  + CG  +S  + K+ + ++ +G G   +L
Sbjct: 617 GRGGSE-GCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGA-VFTWGNGEGYKL 668



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 118/291 (40%), Gaps = 74/291 (25%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G+++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3929 TLSWGGSGQIWGWGHNHRGQLGGVEGAKVK---LPVSCETLATMRPVQLIGGEQTLFSIT 3985

Query: 66   S------------------------------------------TTGLWHSLALNDCGEVF 83
                                                        +G  H LAL+  GEV+
Sbjct: 3986 GDGKVCATGYGAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVY 4045

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
            +WG    G+LG    ++     P+ ++ L    VV   AG +H   +TS+G +    K  
Sbjct: 4046 SWGEGEDGKLG--HGNRSPCDRPRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGR 4103

Query: 144  ----GCGSDPSQGVQSNLVQ---------------DSHT-TITSLNSPGELYTWGNNEYG 183
                G G    Q  +  LV                D+ T  IT  +S   +++WG+ +YG
Sbjct: 4104 YGRLGHGDSEDQ-TKPKLVDALKGYRVTDVACGSGDAQTLCITDDDS---VWSWGDGDYG 4159

Query: 184  QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
            ++G   S+     P ++++L  L +  + CG+  S  L+KS + +Y +G G
Sbjct: 4160 KLGRGGSDGCKV-PMKIDALQGLGVIKVECGSQFSVALTKSGA-VYTWGKG 4208



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 55/223 (24%)

Query: 14   GEVFTWGGDTHGQLGLE-SADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWH 72
            G++F  G  T+G+LGL  SA    Q  P+++  L+   V++  A +S         G  H
Sbjct: 2966 GKLFACGEATNGRLGLGISAGNVPQ--PRQLTSLSQY-VIKKVAVHS---------GGRH 3013

Query: 73   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 132
            ++AL   G+VF+WG    G+LG  S  + +   P+ ++ L S  V               
Sbjct: 3014 AMALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALRSKRV--------------- 3056

Query: 133  SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNT 192
                    ++  CG   S  + SN               G+LYTWG  EYG++G +  NT
Sbjct: 3057 --------RDIACGGSHSAAIISN---------------GDLYTWGLGEYGRLG-HGDNT 3092

Query: 193  TVTKPQRVESLVNLPIALIACGANHSFVLSKSVS-RLYAFGIG 234
            T  +P+ V++L    +  +A G+  +  L+ + S  +Y++G G
Sbjct: 3093 TQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDG 3135



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 23/198 (11%)

Query: 73   SLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
            +L+    G+++ WG +  GQLG +E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3929 TLSWGGSGQIWGWGHNHRGQLGGVEGAKVK---LPVSCETLATMRPVQLIGGEQTLFSIT 3985

Query: 132  SSGVVTCT---------HKENGCGSDPS--QGVQSNLVQ-----DSHTTITSLNSPGELY 175
              G V  T                + P+  + +Q   ++            +L++ GE+Y
Sbjct: 3986 GDGKVCATGYGAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVY 4045

Query: 176  TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
            +WG  E G++G  N  +   +P+ +ESL    +  IA G  HS  ++ S   LY++G G 
Sbjct: 4046 SWGEGEDGKLGHGN-RSPCDRPRAIESLRGKEVVDIAAGGAHSACIT-STGELYSWGKGR 4103

Query: 236  AVQLDSPKSVHKT-PQLI 252
              +L    S  +T P+L+
Sbjct: 4104 YGRLGHGDSEDQTKPKLV 4121



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 63/147 (42%), Gaps = 27/147 (18%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S+AL   G V+TWG   + +LG  + D   +  P+R   L    +V    G  HC+  T 
Sbjct: 4193 SVALTKSGAVYTWGKGDYHRLGHGTEDHIRR--PRRCTTLQGKKIVSIACGSLHCVACT- 4249

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGY 124
                       D GEV+TWG +  GQLG    D  + +I  P+ V  L    + +   G 
Sbjct: 4250 -----------DAGEVYTWGDNDEGQLG----DGTTNAIQRPRLVAALQGKKINRVACGS 4294

Query: 125  SHCLVLTSSGVVTCTHKENGCGSDPSQ 151
            +H L  +       T+K    G  P+Q
Sbjct: 4295 AHSLAWS-------TNKPVNAGKLPAQ 4314



 Score = 45.1 bits (105), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 23/164 (14%)

Query: 109 VKGLASVSVVQACAGY--SHCLVLTSSGVV---------TCTHKENGCGSDP-------S 150
           +  LA + +++  A    SHCL LTS G V            H +      P        
Sbjct: 470 ISTLADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHG 529

Query: 151 QGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL 210
           + V  N+   SH +  ++ + GEL+TWG   +G++G+ ++   +T P  V  L+ + +  
Sbjct: 530 KSV-VNVACGSHHS-AAITASGELFTWGRGSFGRLGLGSTEDILT-PALVSGLLGVTVVD 586

Query: 211 IACGANHSFVLS-KSVSRLYAFGIGSAVQLDSPKSVH-KTPQLI 252
           +ACG+  +  ++      +Y++G G   +L    S   K P+L+
Sbjct: 587 VACGSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLV 630


>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
          Length = 4706

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3108 GSSHSAAITSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3164

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3165 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3213

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G G+D     P   +G++   +   H  + +L+  
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3271

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3272 AVTDTGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 109/250 (43%), Gaps = 38/250 (15%)

Query: 7    SLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQLG +E A  K   +P   + LA++  +Q   G      +T
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALAALRPIQLIGGEQTLFAVT 4004

Query: 66   ST-----------------TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKR 108
            +                  +G   +L L D   V++WG   +G+LG   +D     +P +
Sbjct: 4005 ADGKVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMK 4062

Query: 109  VKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNL 157
            +  L  + VV+   G    + LT SG V    K +    G GSD         QG+Q   
Sbjct: 4063 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4122

Query: 158  VQDSHTT---ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACG 214
            V    T           GE+YTWG+N+ GQ+G   +N  + +P+ V +L    I  +ACG
Sbjct: 4123 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKINRVACG 4181

Query: 215  ANHSFVLSKS 224
            + H+   S S
Sbjct: 4182 SAHTLAWSTS 4191



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3055 SGGRHAMALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3112

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3113 AAITSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3158

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + ++  V KPQ VE L    I  +A GA H   ++ + 
Sbjct: 3219 LALTKSGVVWTWGKGDYFRLG-HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDT- 3276

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3277 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3306



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 126/281 (44%), Gaps = 62/281 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEVF+WG    G+LG         ++P +  K ++++S  QA     H    
Sbjct: 507 HYLALAATGEVFSWGCGDGGRLG------HGDTVPLEEPKMISALSGKQAGKHVVHI--- 557

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   Q+IP  V GL  + V+      
Sbjct: 558 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DQTIPMLVTGLKGLKVIDV---- 609

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 610 -------------------SCGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 637

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 638 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSVALTKD-GQVYSWGKGDNQRLGHGTE 695

Query: 245 VH-KTPQLIHGPWIASPVAMTAG--------EDSLVSHSGG 276
            H + P+L+ G      V + AG        EDS V HS G
Sbjct: 696 EHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEV-HSWG 735



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   Q+IP  V GL  + V+    G     
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DQTIPMLVTGLKGLKVIDVSCG----- 612

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 665

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLAL 725

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRITKPEPTALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L++  VV+  A +S         G  H+
Sbjct: 3012 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSNY-VVKKVAVHS---------GGRHA 3060

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   +TSS
Sbjct: 3061 MALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3118

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3119 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3177

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3178 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3235

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3236 FRLGHGTDVHVRKPQVVEG 3254



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 99/228 (43%), Gaps = 40/228 (17%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3011

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L++  V  V   +G  H + LT 
Sbjct: 3012 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTV 3065

Query: 133  SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN------------------SPGEL 174
             G V       G G D   G  S +  D    I +L                   S GEL
Sbjct: 3066 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3121

Query: 175  YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            YTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3122 YTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG    D   +  P+ V+GL    +V    G  HCL
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLG-HGTDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3271

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3272 AVT------------DTGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3317

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3318 GSSHSVAWTTVDVAT 3332



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEVF+WG    G+LG     
Sbjct: 485 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVFSWGCGDGGRLG----- 529

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K ++++S  QA     H                  CGS           
Sbjct: 530 -HGDTVPLEEPKMISALSGKQAGKHVVHI----------------ACGS----------- 561

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G + S+   T P  V  L  L +  ++CG+  +
Sbjct: 562 ----TYSAAITAEGELYTWGRGNYGRLG-HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDA 616

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 653


>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
          Length = 555

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 97/231 (41%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV          
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTVNQPIPRRVTGCLQNKVV---------- 207

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T   G    +A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L  + V +   
Sbjct: 208 -VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGL--GNSGNQPTPCRVAALQGIRVQRVAC 264

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT  G                                      ++Y WG N Y
Sbjct: 265 GYAHTLVLTDEG--------------------------------------QVYAWGANSY 286

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 287 GQLGTGNKSNQSYPTPVTVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L    +  AC  Y           
Sbjct: 63  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGKKI--ACLSY----------- 105

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE++TWG+N Y Q+G   +N  + 
Sbjct: 106 ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNHGLV 141

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  +V++  P+ + G
Sbjct: 142 PCHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG 200


>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 97/231 (41%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV          
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTVNQPIPRRVTGCLQNKVV---------- 207

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T   G    +A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L  + V +   
Sbjct: 208 -VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGL--GNSGNQPTPCRVAALQGIRVQRVAC 264

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT  G                                      ++Y WG N Y
Sbjct: 265 GYAHTLVLTDEG--------------------------------------QVYAWGANSY 286

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 287 GQLGTGNKSNQSYPTPVTVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L    +  AC  Y           
Sbjct: 63  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGKKI--ACLSY----------- 105

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE++TWG+N Y Q+G   +N  + 
Sbjct: 106 ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNHGLV 141

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  +V++  P+ + G
Sbjct: 142 PCHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG 200


>gi|406859763|gb|EKD12826.1| HECT-domain-containing protein [Marssonina brunnea f. sp.
            'multigermtubi' MB_m1]
          Length = 1235

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 126/265 (47%), Gaps = 36/265 (13%)

Query: 841  QQPGVVDSTNGDITFNR--KLSFCLQVLQKLNSLNNETLTS-SISAGGRTVSNI------ 891
            Q P   DS    + +N   ++    +V+  + S NN  L     S   R  S+       
Sbjct: 713  QTPKKNDSRPKPVIYNDDWQIKAAARVMSLIFSANNSGLVKRGDSRPARAASDTGHSHSI 772

Query: 892  ----RTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDA 947
                R  A   G+ +  + FY   L    D+  D+  W S R    T+   C YPF    
Sbjct: 773  GLAARGRAQRHGQILPTSDFYN-TLLDYSDLIADFEAWESKR----TKFAFCQYPFFLSI 827

Query: 948  KAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQY 1007
             AK  ++E D R QME    +  F   +   N   +NQYL +++ R+ +VED+++ +   
Sbjct: 828  WAKIQIMEHDARRQMEVKAREAFFDSIMTRKN---VNQYLILKIRRECLVEDSLKGVGAV 884

Query: 1008 TT---NDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFK 1064
                  + KK L++            +FRGEE  DAGG+R+E+ +LL++++ +P++GMF 
Sbjct: 885  VGTGGEEIKKGLRI------------EFRGEEGIDAGGLRKEWFLLLVRDVFNPEHGMFA 932

Query: 1065 EYEETRSIWFSEDTFEDQNMYFLIG 1089
              +++   +F+ ++FE  + +FL+G
Sbjct: 933  YDDDSGFCYFNPNSFETTDQFFLVG 957



 Score = 50.8 bits (120), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 18/112 (16%)

Query: 719  HYGITEYEETRSI-WFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
             +G+  Y++     +F+ ++FE  +  FL+G + GLAIYN TI+++  P   ++K+L   
Sbjct: 927  EHGMFAYDDDSGFCYFNPNSFETTDQFFLVGVVLGLAIYNSTILDVALPPFAFRKLLAAA 986

Query: 778  IL----------------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                              L+DL +  P LA+ L+ +L++ E D+E  F   F
Sbjct: 987  PPTAAGASSHTKLSMTYSLEDLAEYRPALAQGLRQLLEF-EGDVEATFCRDF 1037


>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 556

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 97/231 (41%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV          
Sbjct: 165 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTINQPIPRRVTGCLQNKVV---------- 212

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T   G    +A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L  + V +   
Sbjct: 213 -VTIACGQMCCMAVVDSGEVYVWGYNGNGQLGL--GNSGNQPTPCRVAALQGIRVQRVAC 269

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT  G                                      ++Y WG N Y
Sbjct: 270 GYAHTLVLTDEG--------------------------------------QVYAWGANSY 291

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 292 GQLGTGNKSNQSYPTPVTVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L+   +  AC  Y           
Sbjct: 68  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGKKI--ACLSY----------- 110

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE++TWG+N Y Q+G   +N  + 
Sbjct: 111 ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNHGLV 146

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  ++++  P+ + G
Sbjct: 147 PCHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTINQPIPRRVTG 205


>gi|407916881|gb|EKG10211.1| HECT domain-containing protein [Macrophomina phaseolina MS6]
          Length = 1207

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 12/152 (7%)

Query: 938  LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIV 997
             C YPF     AK  ++E D R QME+   +  F   L   N   L QY  + V R+ +V
Sbjct: 783  FCQYPFFLSIGAKIKIMEHDARRQMENKAREAFFDSILSNRN---LEQYFNLRVRRECLV 839

Query: 998  EDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILD 1057
            ED++R +++      ++         I    +V F GEE  DAGG+R+E+ ++L++E+ D
Sbjct: 840  EDSLRRISEVVGGGGEE---------IKKGLRVHFVGEEGVDAGGLRKEWFLMLVRELFD 890

Query: 1058 PKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            P +GMF   E+++  +F+ +TFE  + +FL+G
Sbjct: 891  PNHGMFIYDEDSQFCYFNPNTFEQSDQFFLVG 922



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 16/111 (14%)

Query: 718  NHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            NH      E+++  +F+ +TFE  +  FL+G + GLA+YN TI+++  P   +KK+L   
Sbjct: 892  NHGMFIYDEDSQFCYFNPNTFEQSDQFFLVGAVLGLALYNSTILDVALPPFAFKKLLASA 951

Query: 778  ---------------ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                             L DL +  P LAK L+ +L++ E D+E+ F   F
Sbjct: 952  PTKNGVAPASRNRIDYTLDDLAEFRPRLAKGLRQLLEF-EGDVEETFCRDF 1001


>gi|347441869|emb|CCD34790.1| similar to ubiquitin-protein ligase E3 [Botryotinia fuckeliana]
          Length = 1230

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 24/202 (11%)

Query: 891  IRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAK 950
            IR  A HG  ++  T+ +   L    D+  D+  W + R   S     C YPF     AK
Sbjct: 772  IRALAAHG--QMLPTSHFYNTLLDYSDLVADFEAWENKRSKFS----FCQYPFFLSIWAK 825

Query: 951  TTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIR---ELAQY 1007
              ++E D R QME    +  F   +       ++Q L + V R+ +VED+++   E+   
Sbjct: 826  IQIMEHDARRQMEVKAREAFFNSIMTR---KVVSQNLLLRVRRECLVEDSLKGVSEVVGT 882

Query: 1008 TTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYE 1067
               + KK LK+            +F+GEE  DAGG+R+E+ +LL++E+ +P +GMF   E
Sbjct: 883  GGEEIKKSLKI------------EFKGEEGIDAGGLRKEWFLLLVREVFNPDHGMFSYDE 930

Query: 1068 ETRSIWFSEDTFEDQNMYFLIG 1089
            ++   +F+ ++FE  + YFL+G
Sbjct: 931  DSHFCYFNPNSFETTDQYFLVG 952



 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 18/111 (16%)

Query: 720  YGITEYEETRSI-WFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILD--- 775
            +G+  Y+E     +F+ ++FE  +  FL+G + GLAIYN TI+++  P   ++K+L    
Sbjct: 923  HGMFSYDEDSHFCYFNPNSFETTDQYFLVGAVLGLAIYNSTILDVALPPFAFRKLLAAAP 982

Query: 776  ----------EPIL---LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                      +P +   L+DL +  P LA  L+ +L++ + D+E+ F   F
Sbjct: 983  AAAPGATSHAKPSMTYSLEDLAEFRPALAHGLRQLLEF-DGDVEETFCRDF 1032


>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
           [Gorilla gorilla gorilla]
          Length = 527

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 97/231 (41%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV          
Sbjct: 136 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTVNQPIPRRVTGCLQNKVV---------- 183

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T   G    +A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L  + V +   
Sbjct: 184 -VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGL--GNSGNQPTPCRVAALQGIRVQRVAC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT  G                                      ++Y WG N Y
Sbjct: 241 GYAHTLVLTDEG--------------------------------------QVYAWGANSY 262

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 263 GQLGTGNKSNQSYPTPVTVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 50.8 bits (120), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L    +  AC  Y           
Sbjct: 39  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGKKI--ACLSY----------- 81

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE++TWG+N Y Q+G   +N  + 
Sbjct: 82  ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNHGLV 117

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  +V++  P+ + G
Sbjct: 118 PCHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG 176


>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
          Length = 556

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 97/231 (41%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV          
Sbjct: 165 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTVNQPIPRRVTGCLQNKVV---------- 212

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T   G    +A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L  + V +   
Sbjct: 213 -VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGL--GNSGNQPTPCRVAALQGIRVQRVAC 269

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT  G                                      ++Y WG N Y
Sbjct: 270 GYAHTLVLTDEG--------------------------------------QVYAWGANSY 291

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 292 GQLGTGNKSNQSYPTPVTVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L    +  AC  Y           
Sbjct: 68  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGKKI--ACLSY----------- 110

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE++TWG+N Y Q+G   +N  + 
Sbjct: 111 ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNHGLV 146

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  +V++  P+ + G
Sbjct: 147 PCHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG 205


>gi|85110577|ref|XP_963528.1| hypothetical protein NCU06756 [Neurospora crassa OR74A]
 gi|28881348|emb|CAD70390.1| related to ubiquitin-protein ligase HUL4 [Neurospora crassa]
 gi|28925211|gb|EAA34292.1| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 1322

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 23/194 (11%)

Query: 899  GRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQ 958
            G+ +A + FY   L    D+  D+  W S +     +   C +PF+    AK  +LE D 
Sbjct: 872  GQILATSDFYT-TLLDDSDLVADFETWESKK----GKFAFCQFPFLLSIGAKIQILEYDA 926

Query: 959  RIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTN---DFKKP 1015
            + QME       F   L       + Q+L ++V RD +V+D+++ +++   +   D KK 
Sbjct: 927  KRQMEDKARDAFFNSILTH---RVIQQHLVLDVRRDCLVDDSLKAVSEVIGSGGEDIKKG 983

Query: 1016 LKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFS 1075
            LK+N            F+GEE  DAGG+R+E+ +LL++E+ +P +GMF   E+++  +F+
Sbjct: 984  LKIN------------FKGEEGIDAGGLRKEWFLLLVREVFNPDHGMFVYDEDSQYCYFN 1031

Query: 1076 EDTFEDQNMYFLIG 1089
              + E    YFL+G
Sbjct: 1032 PASLEPSEQYFLVG 1045



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 16/103 (15%)

Query: 726  EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL---DEPIL--- 779
            E+++  +F+  + E     FL+G + GLAIYN TI+++  P   ++K+L     P L   
Sbjct: 1023 EDSQYCYFNPASLEPSEQYFLVGVVFGLAIYNSTILDVALPPFAFRKLLMAAPPPTLATS 1082

Query: 780  ---------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                     L DL +  P LA  L+ +L+Y + D+E  F + F
Sbjct: 1083 QPRQPMTYSLDDLAEYRPRLASGLRQLLEY-DGDVESTFCLDF 1124


>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 443

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 134/289 (46%), Gaps = 57/289 (19%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-----------------PKRVKG 45
           G +H  A+ + GEV+TWG    G+LG E   K+ Q I                 P++++ 
Sbjct: 144 GQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIES 203

Query: 46  LASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI 105
           L ++   Q   G    +VL+            + G+V+T+G + +G LG  S D+ S + 
Sbjct: 204 LGNIKAKQVACGIQFTVVLS------------EDGKVYTFGYNQYGSLGYVS-DQNSVTT 250

Query: 106 PKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKENG-CGSDPSQ-----------G 152
           P+ +K L    +V+  AGYS C  +T  G + T  +  NG  G+  S            G
Sbjct: 251 PQLIKDLN--DIVKISAGYSFCAAITKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFG 308

Query: 153 VQSNLVQDS--HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL 210
            Q+++V  S     I +L   G+LYTWG    GQ+G  N  + +  P+ VE      I  
Sbjct: 309 SQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHGNK-SDLYAPRHVE--FKQKIIK 365

Query: 211 IACGANHSFVLSKSVSRLYAFGIGSAVQLD------SPKSVHKTPQLIH 253
           IACG +H+  +++  ++LY FG GS  QL       S  S+  TP L+ 
Sbjct: 366 IACGGSHAAFITED-NQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQ 413



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 71/266 (26%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           S+AL   GEV++WG +  G LG E     + + P+R++ L    + Q             
Sbjct: 94  SMALTHNGEVYSWGKNKGGILGHEDRLSFNMTQPERIEKLLGKKIKQI------------ 141

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-----------------PKRV 109
           + G +H  A+ + GEV+TWG    G+LG E   K+ Q I                 P+++
Sbjct: 142 SCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKI 201

Query: 110 KGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN 169
           + L ++   Q   G    +VL+  G V                                 
Sbjct: 202 ESLGNIKAKQVACGIQFTVVLSEDGKV--------------------------------- 228

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
                YT+G N+YG +G  +   +VT PQ ++ L +  I  I+ G +    ++K   +LY
Sbjct: 229 -----YTFGYNQYGSLGYVSDQNSVTTPQLIKDLND--IVKISAGYSFCAAITKQ-GKLY 280

Query: 230 AFGIGSAVQLDSPKSVHKT-PQLIHG 254
            +G     QL + +S+++T P ++ G
Sbjct: 281 TWGNNRNGQLGNSQSLYQTKPSIVTG 306



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 108/272 (39%), Gaps = 77/272 (28%)

Query: 4   LWHSLALNDCGE--VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           ++ S+  N+  E  V++WG    GQLGL++ +  +   P  ++ L    + +  AG S  
Sbjct: 37  IYQSILANEYPETIVYSWGYGGFGQLGLQNEN--NYYTPTEIEVLTDKKIKKVEAGKSI- 93

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      S+AL   GEV++WG +  G LG E     + + P+R++ L    + Q  
Sbjct: 94  -----------SMALTHNGEVYSWGKNKGGILGHEDRLSFNMTQPERIEKLLGKKIKQIS 142

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G  H   +T                                        GE+YTWGN E
Sbjct: 143 CGQFHMAAVTED--------------------------------------GEVYTWGNKE 164

Query: 182 YGQMGINNSNTTVTK------------------PQRVESLVNLPIALIACGANHSFVLSK 223
           +G++G         K                  PQ++ESL N+    +ACG   + VLS+
Sbjct: 165 FGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSE 224

Query: 224 SVSRLYAFG---IGSAVQLDSPKSVHKTPQLI 252
              ++Y FG    GS   +    SV  TPQLI
Sbjct: 225 D-GKVYTFGYNQYGSLGYVSDQNSV-TTPQLI 254


>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
 gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
          Length = 527

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 97/231 (41%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV          
Sbjct: 136 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTVNQPIPRRVTGCLQNKVV---------- 183

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T   G    +A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L  + V +   
Sbjct: 184 -VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGL--GNSGNQPTPCRVAALQGIRVQRVAC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT  G                                      ++Y WG N Y
Sbjct: 241 GYAHTLVLTDEG--------------------------------------QVYAWGANSY 262

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 263 GQLGTGNKSNQSYPTPVTVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L    +  AC  Y           
Sbjct: 39  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGKKI--ACLSY----------- 81

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE++TWG+N Y Q+G   +N  + 
Sbjct: 82  ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNHGLV 117

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  +V++  P+ + G
Sbjct: 118 PCHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG 176


>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
          Length = 4839

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3167

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3168 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3216

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G G+D     P   +G++   +   H  + +L+  
Sbjct: 3217 GAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3274

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3275 AVTDTGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 106/237 (44%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G++FTWG   +G+LG    D + Q  PK V+ L    V+    G    
Sbjct: 4103 AGGAHSACITAAGDLFTWGKGRYGRLG--HGDSEDQLKPKLVEALQGYRVIDIACG---- 4156

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4157 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4208

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4209 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    I  +ACG+ H+   S S
Sbjct: 4269 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKINRVACGSAHTLAWSTS 4324



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3058 SGGRHAMALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3115

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3116 AAITSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3161

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3162 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3221

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + ++  V KPQ VE L    I  +A GA H   ++ + 
Sbjct: 3222 LALTKSGVVWTWGKGDYFRLG-HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDT- 3279

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3280 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3309



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL+  GEVF+WG    G+LG         ++P +  K ++++S  QA     H    
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLG------HGDTVPLEEPKMISALSGKQAGKHVVHI--- 557

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   Q+IP  V GL  + V+      
Sbjct: 558 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DQTIPMLVTGLKGLKVIDV---- 609

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 610 -------------------SCGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 637

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L I  + CG+  S  L+K   ++Y +G G   +L     
Sbjct: 638 LGRGGSDGCKT-PKLIEKLQDLDIVKVRCGSQFSIALTKD-GQVYTWGKGDNQRLGHGTE 695

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 696 EHVRYPKLLEG 706



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 35/268 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H LAL+  GEV++WG    G+LG    ++     P+ ++ L  + VV   AG +H 
Sbjct: 4051 SGGKHCLALSFEGEVYSWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDIAAGGAHS 4108

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-A 120
              +T+             G++FTWG   +G+LG    D + Q  PK V+ L    V+  A
Sbjct: 4109 ACITAA------------GDLFTWGKGRYGRLG--HGDSEDQLKPKLVEALQGYRVIDIA 4154

Query: 121  C-AGYSHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQDSHTTI------------ 165
            C +G +  L LT    V      +    G   S G +  +  DS T +            
Sbjct: 4155 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4214

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G +YTWG  +Y ++G + S+  V +P++V+ L    +  IA G+ H    ++  
Sbjct: 4215 VALTKSGAVYTWGKGDYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED- 4272

Query: 226  SRLYAFGIGSAVQL-DSPKSVHKTPQLI 252
              +Y +G     QL D   +  + P+L+
Sbjct: 4273 GEVYTWGDNDEGQLGDGTTNAIQRPRLV 4300



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L++  VV+  A +S         G  H+
Sbjct: 3015 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSNY-VVKKVAVHS---------GGRHA 3063

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   +TSS
Sbjct: 3064 MALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3121

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3122 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3180

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3181 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3238

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3239 FRLGHGTDVHVRKPQVVEG 3257



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   Q+IP  V GL  + V+    G     
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DQTIPMLVTGLKGLKVIDVSCG----- 612

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + +V+   
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDIVKVRC 665

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G++   V D     T   +L
Sbjct: 666 GSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLAL 725

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRITKPEPAALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 130/323 (40%), Gaps = 73/323 (22%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4006

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4007 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVY 4066

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G +    K  
Sbjct: 4067 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGR 4124

Query: 144  ----GCGSDPSQGVQSNLVQ---------------DSHTTITSLNSPGELYTWGNNEYGQ 184
                G G    Q ++  LV+               D+ T    L     +++WG+ +YG+
Sbjct: 4125 YGRLGHGDSEDQ-LKPKLVEALQGYRVIDIACGSGDAQTLC--LTDDDTVWSWGDGDYGK 4181

Query: 185  MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
            +G   S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L     
Sbjct: 4182 LGRGGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSD 4239

Query: 245  VH-KTPQLIHGPWIASPVAMTAG 266
             H + P+ + G      +A+  G
Sbjct: 4240 DHVRRPRQVQGLQGKKVIAIATG 4262



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 99/228 (43%), Gaps = 40/228 (17%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3014

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L++  V  V   +G  H + LT 
Sbjct: 3015 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTV 3068

Query: 133  SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN------------------SPGEL 174
             G V       G G D   G  S +  D    I +L                   S GEL
Sbjct: 3069 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3124

Query: 175  YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            YTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3125 YTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG    D   +  P+ V+GL    +V    G  HCL
Sbjct: 3217 GAQFSLALTKSGVVWTWGKGDYFRLG-HGTDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3274

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3275 AVT------------DTGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3320

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3321 GSSHSVAWTTVDVAT 3335



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+ LAS ++V+          + + +   H LAL+  GEVF+WG    G+LG     
Sbjct: 485 PQLVQSLASRNIVK----------IAAHSDGHHYLALSANGEVFSWGCGDGGRLG----- 529

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K ++++S  QA     H                  CGS           
Sbjct: 530 -HGDTVPLEEPKMISALSGKQAGKHVVHI----------------ACGS----------- 561

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G + S+   T P  V  L  L +  ++CG+  +
Sbjct: 562 ----TYSAAITAEGELYTWGRGNYGRLG-HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDA 616

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 653


>gi|154289940|ref|XP_001545573.1| hypothetical protein BC1G_15911 [Botryotinia fuckeliana B05.10]
          Length = 1214

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 24/202 (11%)

Query: 891  IRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAK 950
            IR  A HG  ++  T+ +   L    D+  D+  W + R   S     C YPF     AK
Sbjct: 756  IRALAAHG--QMLPTSHFYNTLLDYSDLVADFEAWENKRSKFS----FCQYPFFLSIWAK 809

Query: 951  TTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIR---ELAQY 1007
              ++E D R QME    +  F   +       ++Q L + V R+ +VED+++   E+   
Sbjct: 810  IQIMEHDARRQMEVKAREAFFNSIMTR---KVVSQNLLLRVRRECLVEDSLKGVSEVVGT 866

Query: 1008 TTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYE 1067
               + KK LK+            +F+GEE  DAGG+R+E+ +LL++E+ +P +GMF   E
Sbjct: 867  GGEEIKKSLKI------------EFKGEEGIDAGGLRKEWFLLLVREVFNPDHGMFSYDE 914

Query: 1068 ETRSIWFSEDTFEDQNMYFLIG 1089
            ++   +F+ ++FE  + YFL+G
Sbjct: 915  DSHFCYFNPNSFETTDQYFLVG 936



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 18/111 (16%)

Query: 720  YGITEYEETRSI-WFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILD--- 775
            +G+  Y+E     +F+ ++FE  +  FL+G + GLAIYN TI+++  P   ++K+L    
Sbjct: 907  HGMFSYDEDSHFCYFNPNSFETTDQYFLVGAVLGLAIYNSTILDVALPPFAFRKLLAAAP 966

Query: 776  ----------EPIL---LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                      +P +   L+DL +  P LA  L+ +L++ + D+E+ F   F
Sbjct: 967  AAAPGATSHAKPSMTYSLEDLAEFRPALAHGLRQLLEF-DGDVEETFCRDF 1016


>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Macaca mulatta]
          Length = 519

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 98/231 (42%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     V           
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTVNQPIPRRVTGCLQNKV----------- 206

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V+T   G    +A+ D GEV+ WG + +GQLGL S+   +Q  P RV  L  + V +   
Sbjct: 207 VVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSG--NQPTPCRVAALQGIRVQRVAC 264

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 265 GYAHTLVLTDE--------------------------------------GQVYAWGANSY 286

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 287 GQLGTGNKSNQSYPTPVTVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 2/86 (2%)

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           + GE++TWG+N Y Q+G   +N  +   Q   +L N  +  +ACG+ HS VL+ S   ++
Sbjct: 116 TEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLT-SDGEVF 174

Query: 230 AFGIGSAVQLDSPKSVHK-TPQLIHG 254
           A+G  ++ Q+ S  +V++  P+ + G
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTG 200


>gi|302817127|ref|XP_002990240.1| hypothetical protein SELMODRAFT_447965 [Selaginella moellendorffii]
 gi|300141949|gb|EFJ08655.1| hypothetical protein SELMODRAFT_447965 [Selaginella moellendorffii]
          Length = 683

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 90/176 (51%), Gaps = 21/176 (11%)

Query: 901  KVAYTAFYMPDLATV-CDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQR 959
            ++ ++AFY   +     +++ D+ RW+   P      F C YPF+FD  +K+ +L+MD  
Sbjct: 254  RIGHSAFYNDAVNNDDFNLKDDFSRWVD--PTRQQFSF-CQYPFVFDPSSKSKILQMDSI 310

Query: 960  IQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVN 1019
             QM            L++        YL + V RD +V DTI ++ Q    D KKPLKV 
Sbjct: 311  FQMTEEFEDA----ILRSVFIGMTCPYLILRVRRDFLVRDTIVQI-QEQLGDLKKPLKV- 364

Query: 1020 DTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFS 1075
                        F GEE  D GGV++EF  LL++E+ +P+YGMF   +E R  WF+
Sbjct: 365  -----------VFVGEEGIDEGGVQKEFFQLLVRELFNPQYGMFSYSDEARCFWFN 409



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 8/101 (7%)

Query: 719 HYGITEY-EETRSIWF----SEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKI 773
            YG+  Y +E R  WF    SE  F+ +    L+G L GLAIYN  I+++ FP  +YKK+
Sbjct: 393 QYGMFSYSDEARCFWFNATPSELNFDTEFE--LVGILLGLAIYNGHILDLHFPTVVYKKL 450

Query: 774 LDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
           L +P+ L DL  + P LAK L+ +L +   D+E+ +  TF+
Sbjct: 451 LGKPLALDDLGQVKPDLAKGLEHLLRF-TGDVEETYSRTFQ 490


>gi|322798652|gb|EFZ20256.1| hypothetical protein SINV_12404 [Solenopsis invicta]
          Length = 850

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 95/193 (49%), Gaps = 26/193 (13%)

Query: 902  VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQ 961
            + +T FY   L+   ++  D+  + S  P   +     NY FI     KT  L  D RI+
Sbjct: 419  IPFTDFYNEPLSDAIEMDKDFAYYKSEEPMKFS---FMNYAFILTPATKTLGLYYDNRIR 475

Query: 962  M--EHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIREL---AQYTTNDFKKPL 1016
            M  E  M+      FLQT      N YL ++V RD++++D + EL   A    +D KK L
Sbjct: 476  MYSERRMS------FLQTVVGQPTNPYLRLKVRRDHLIDDALVELEMVAMENPSDLKKQL 529

Query: 1017 KVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSE 1076
             V            +F GE+  D GGV +EF  L+++EI +P +GMF   E+T+  WF+ 
Sbjct: 530  VV------------EFEGEQGVDEGGVSKEFFQLVVEEIFNPDFGMFTTQEDTQMTWFNP 577

Query: 1077 DTFEDQNMYFLIG 1089
             +FE    + LIG
Sbjct: 578  TSFESDAQFTLIG 590



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 59/95 (62%)

Query: 723 TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQD 782
           T  E+T+  WF+  +FE      LIG + GLAIYN  I+++ FP+ +Y+K+L       D
Sbjct: 565 TTQEDTQMTWFNPTSFESDAQFTLIGIVIGLAIYNNVILDVRFPMVVYRKLLGRKGGFPD 624

Query: 783 LKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
           L+D SPTL ++++++++Y   D+ + F  TFR  Y
Sbjct: 625 LEDWSPTLYRTMKELMEYTGDDMPETFMQTFRVGY 659


>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
          Length = 4839

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3167

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3168 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3216

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G G+D     P   +G++   +   H  + +L+  
Sbjct: 3217 GAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3274

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3275 AVTDTGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 106/237 (44%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G++FTWG   +G+LG    D + Q  PK V+ L    V+    G    
Sbjct: 4103 AGGAHSACITAAGDLFTWGKGRYGRLG--HGDSEDQLKPKLVEALQGYRVIDIACG---- 4156

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4157 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTDLGVVKVE 4208

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4209 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    I  +ACG+ H+   S S
Sbjct: 4269 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKINRVACGSAHTLAWSTS 4324



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 35/268 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H LAL+  GEV++WG    G+LG    ++     P+ ++ L  + VV   AG +H 
Sbjct: 4051 SGGKHCLALSSEGEVYSWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDIAAGGAHS 4108

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-A 120
              +T+             G++FTWG   +G+LG    D + Q  PK V+ L    V+  A
Sbjct: 4109 ACITA------------AGDLFTWGKGRYGRLG--HGDSEDQLKPKLVEALQGYRVIDIA 4154

Query: 121  C-AGYSHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQDSHTTI------------ 165
            C +G +  L LT    V      +    G   S G +  +  DS T +            
Sbjct: 4155 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFS 4214

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G +YTWG  +Y ++G + S+  V +P++V+ L    +  IA G+ H    ++  
Sbjct: 4215 VALTKSGAVYTWGKGDYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED- 4272

Query: 226  SRLYAFGIGSAVQL-DSPKSVHKTPQLI 252
              +Y +G     QL D   +  + P+L+
Sbjct: 4273 GEVYTWGDNDEGQLGDGTTNAIQRPRLV 4300



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++AL   G++F+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3058 SGGRHAMALTVDGKIFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3115

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3116 AAITSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3161

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3162 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3221

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + ++  V KPQ VE L    I  +A GA H   ++ + 
Sbjct: 3222 LALTKSGVVWTWGKGDYFRLG-HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDT- 3279

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3280 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3309



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL+  GEVF+WG    G+LG         ++P +  K ++++S  QA     H    
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLG------HGDTVPLEEPKLISALSGKQAGKHVVHI--- 557

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   Q+IP  V GL  + V+      
Sbjct: 558 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DQTIPMLVTGLKGLKVIDVS--- 610

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 611 --------------------CGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 637

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L I  + CG+  S  L+K   ++Y +G G   +L     
Sbjct: 638 LGRGGSDGCKT-PKLIEKLQDLDIVKVRCGSQFSIALTKD-GQVYTWGKGDNQRLGHGTE 695

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 696 EHVRYPKLLEG 706



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L++  VV+  A +S         G  H+
Sbjct: 3015 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSNY-VVKKVAVHS---------GGRHA 3063

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL   G++F+WG    G+LG  S  + +   P+ ++ L +  +     G SH   +TSS
Sbjct: 3064 MALTVDGKIFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3121

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3122 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3180

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3181 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3238

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3239 FRLGHGTDVHVRKPQVVEG 3257



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   Q+IP  V GL  + V+    G     
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DQTIPMLVTGLKGLKVIDVSCG----- 612

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + +V+   
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDIVKVRC 665

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G++   V D     T   +L
Sbjct: 666 GSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLAL 725

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRITKPEPAALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 131/323 (40%), Gaps = 73/323 (22%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4006

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4007 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4066

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G +    K  
Sbjct: 4067 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGR 4124

Query: 144  ----GCGSDPSQGVQSNLVQ---------------DSHTTITSLNSPGELYTWGNNEYGQ 184
                G G    Q ++  LV+               D+ T    L     +++WG+ +YG+
Sbjct: 4125 YGRLGHGDSEDQ-LKPKLVEALQGYRVIDIACGSGDAQTLC--LTDDDTVWSWGDGDYGK 4181

Query: 185  MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
            +G   S+     P +++SL +L +  + CG+  S  L+KS + +Y +G G   +L     
Sbjct: 4182 LGRGGSDGCKV-PMKIDSLTDLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSD 4239

Query: 245  VH-KTPQLIHGPWIASPVAMTAG 266
             H + P+ + G      +A+  G
Sbjct: 4240 DHVRRPRQVQGLQGKKVIAIATG 4262



 Score = 67.8 bits (164), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 99/228 (43%), Gaps = 40/228 (17%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3014

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L++  V  V   +G  H + LT 
Sbjct: 3015 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTV 3068

Query: 133  SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN------------------SPGEL 174
             G +       G G D   G  S +  D    I +L                   S GEL
Sbjct: 3069 DGKIFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3124

Query: 175  YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            YTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3125 YTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG    D   +  P+ V+GL    +V    G  HCL
Sbjct: 3217 GAQFSLALTKSGVVWTWGKGDYFRLG-HGTDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3274

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3275 AVT------------DTGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3320

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3321 GSSHSVAWTTVDVAT 3335



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 100/236 (42%), Gaps = 36/236 (15%)

Query: 81   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCT 139
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T  G V  C 
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3021

Query: 140  HKENG-CGSDPSQG---------------VQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
               NG  G   S G               V+   V        +L   G++++WG  + G
Sbjct: 3022 EATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDG 3081

Query: 184  QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD--- 240
            ++G + S     KP+ +E+L    I  IACG++HS  ++ S   LY +G+G   +L    
Sbjct: 3082 KLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS-GELYTWGLGEYGRLGHGD 3139

Query: 241  -----SPKSV-----HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
                  PK V     H+  Q+  G   A  +A+T  ++ LV   G     K+  GG
Sbjct: 3140 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT--DEGLVFSWGDGDFGKLGRGG 3193



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+ LAS ++V+          + + +   H LAL+  GEVF+WG    G+LG     
Sbjct: 485 PQLVQSLASRNIVK----------IAAHSDGHHYLALSANGEVFSWGCGDGGRLG----- 529

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K ++++S  QA     H                  CGS           
Sbjct: 530 -HGDTVPLEEPKLISALSGKQAGKHVVHI----------------ACGS----------- 561

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G + S+   T P  V  L  L +  ++CG+  +
Sbjct: 562 ----TYSAAITAEGELYTWGRGNYGRLG-HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDA 616

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 653


>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
            gallopavo]
          Length = 4815

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3087 GSSHSAAITSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3143

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3144 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3192

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G G+D     P   +G++   +   H  + +L+  
Sbjct: 3193 GAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3250

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3251 AVTDTGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3303



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 106/237 (44%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G++FTWG   +G+LG    D + Q  PK V+ L    V+    G    
Sbjct: 4079 AGGAHSACITAAGDLFTWGKGRYGRLG--HGDSEDQLKPKLVEALQGYRVIDIACG---- 4132

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4133 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4184

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4185 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4244

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    I  +ACG+ H+   S S
Sbjct: 4245 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKINRVACGSAHTLAWSTS 4300



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 35/268 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H LAL+  GEV++WG    G+LG    ++     P+ ++ L  + VV   AG +H 
Sbjct: 4027 SGGKHCLALSSEGEVYSWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDIAAGGAHS 4084

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-A 120
              +T+             G++FTWG   +G+LG    D + Q  PK V+ L    V+  A
Sbjct: 4085 ACITAA------------GDLFTWGKGRYGRLG--HGDSEDQLKPKLVEALQGYRVIDIA 4130

Query: 121  C-AGYSHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQDSHTTI------------ 165
            C +G +  L LT    V      +    G   S G +  +  DS T +            
Sbjct: 4131 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4190

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G +YTWG  +Y ++G + S+  V +P++V+ L    +  IA G+ H    ++  
Sbjct: 4191 VALTKSGAVYTWGKGDYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED- 4248

Query: 226  SRLYAFGIGSAVQL-DSPKSVHKTPQLI 252
              +Y +G     QL D   +  + P+L+
Sbjct: 4249 GEVYTWGDNDEGQLGDGTTNAIQRPRLV 4276



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++AL   G++F+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3034 SGGRHAMALTVDGKIFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3091

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3092 AAITSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3137

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3138 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3197

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + ++  V KPQ VE L    I  +A GA H   ++ + 
Sbjct: 3198 LALTKSGVVWTWGKGDYFRLG-HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDT- 3255

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3256 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3285



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL+  GEVF+WG    G+LG         ++P +  K ++++S  QA     H    
Sbjct: 483 HYLALSANGEVFSWGCGDGGRLG------HGDTVPLEEPKLISALSGKQAGKHVVHI--- 533

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   Q+IP  V GL  + V+      
Sbjct: 534 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DQTIPMLVTGLKGLKVIDVS--- 586

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 587 --------------------CGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 613

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L I  + CG+  S  L+K   ++Y +G G   +L     
Sbjct: 614 LGRGGSDGCKT-PKLIEKLQDLDIVKVRCGSQFSIALTKD-GQVYTWGKGDNQRLGHGTE 671

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 672 EHVRYPKLLEG 682



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L++  VV+  A +S         G  H+
Sbjct: 2991 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSNY-VVKKVAVHS---------GGRHA 3039

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL   G++F+WG    G+LG  S  + +   P+ ++ L +  +     G SH   +TSS
Sbjct: 3040 MALTVDGKIFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3097

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3098 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3156

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3157 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3214

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3215 FRLGHGTDVHVRKPQVVEG 3233



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   Q+IP  V GL  + V+    G     
Sbjct: 536 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DQTIPMLVTGLKGLKVIDVSCG----- 588

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + +V+   
Sbjct: 589 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDIVKVRC 641

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G++   V D     T   +L
Sbjct: 642 GSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLAL 701

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 702 TEDSEVHSWGSNDQCQH-FDTLRITKPEPAALPGLDTKHIVGIACGPAQSFAWS 754



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 129/323 (39%), Gaps = 73/323 (22%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3926 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 3982

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 3983 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4042

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G +    K  
Sbjct: 4043 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGR 4100

Query: 144  ----GCGSDPSQGVQSNLVQ---------------DSHTTITSLNSPGELYTWGNNEYGQ 184
                G G    Q ++  LV+               D+ T    L     +++WG+ +YG+
Sbjct: 4101 YGRLGHGDSEDQ-LKPKLVEALQGYRVIDIACGSGDAQTLC--LTDDDTVWSWGDGDYGK 4157

Query: 185  MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
            +G   S+     P +++SL  L +  + CG+  S  L+KS   +Y +G G   +L     
Sbjct: 4158 LGRGGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKS-GAVYTWGKGDYHRLGHGSD 4215

Query: 245  VH-KTPQLIHGPWIASPVAMTAG 266
             H + P+ + G      +A+  G
Sbjct: 4216 DHVRRPRQVQGLQGKKVIAIATG 4238



 Score = 67.8 bits (164), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 99/228 (43%), Gaps = 40/228 (17%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2940 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 2990

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L++  V  V   +G  H + LT 
Sbjct: 2991 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTV 3044

Query: 133  SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN------------------SPGEL 174
             G +       G G D   G  S +  D    I +L                   S GEL
Sbjct: 3045 DGKIFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3100

Query: 175  YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            YTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3101 YTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3147



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG    D   +  P+ V+GL    +V    G  HCL
Sbjct: 3193 GAQFSLALTKSGVVWTWGKGDYFRLG-HGTDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3250

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3251 AVT------------DTGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3296

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3297 GSSHSVAWTTVDVAT 3311



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 100/236 (42%), Gaps = 36/236 (15%)

Query: 81   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCT 139
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T  G V  C 
Sbjct: 2940 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 2997

Query: 140  HKENG-CGSDPSQG---------------VQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
               NG  G   S G               V+   V        +L   G++++WG  + G
Sbjct: 2998 EATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDG 3057

Query: 184  QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD--- 240
            ++G + S     KP+ +E+L    I  IACG++HS  ++ S   LY +G+G   +L    
Sbjct: 3058 KLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS-GELYTWGLGEYGRLGHGD 3115

Query: 241  -----SPKSV-----HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
                  PK V     H+  Q+  G   A  +A+T  ++ LV   G     K+  GG
Sbjct: 3116 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT--DEGLVFSWGDGDFGKLGRGG 3169



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+ LAS ++V+          + + +   H LAL+  GEVF+WG    G+LG     
Sbjct: 461 PQLVQSLASRNIVK----------IAAHSDGHHYLALSANGEVFSWGCGDGGRLG----- 505

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K ++++S  QA     H                  CGS           
Sbjct: 506 -HGDTVPLEEPKLISALSGKQAGKHVVHI----------------ACGS----------- 537

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G + S+   T P  V  L  L +  ++CG+  +
Sbjct: 538 ----TYSAAITAEGELYTWGRGNYGRLG-HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDA 592

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 593 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 629


>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
          Length = 4746

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 108/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  L   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3018 GSSHSAPLTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3074

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3075 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3123

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3124 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3181

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3182 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3234



 Score = 89.7 bits (221), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    V+    G    
Sbjct: 4010 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVIDIACG---- 4063

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4064 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4115

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4116 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4175

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4176 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4231



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 2965 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIQALKTKRIRDIAYGSSHS 3022

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3023 APLTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3068

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3069 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3128

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3129 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3186

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3187 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3216



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 417 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 467

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 468 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 519

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 520 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 547

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 548 LGRGGSDGCKT-PKLIEKLQDLDVIKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 605

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 606 EHVRYPKLLEG 616



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 122/259 (47%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V++ G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 2922 GKVYSCGEATNGRLGL-GMSSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 2970

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 2971 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSS 3028

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3029 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3087

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3088 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3145

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3146 FRLGHGSDVHVRKPQVVEG 3164



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3857 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 3913

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 3914 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3973

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 3974 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4031

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  I      G+           +++WG+ +YG++G 
Sbjct: 4032 YGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4091

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4092 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4149

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4150 RRPRQVQGLQGKKVIAIATG 4169



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 470 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 522

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + V++   
Sbjct: 523 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVIKVRC 575

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T    L
Sbjct: 576 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVL 635

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P     L +  I  IACG   SF  S
Sbjct: 636 TEDSEVHSWGSNDQCQH-FDTLGVTKPEPTAFPGLDSKHIVGIACGPAQSFAWS 688



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2871 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 2921

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V++ G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 2922 -----GKVYSCGEATNGRLGL-GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 2975

Query: 133  SGVVTCTHKENGCGSDPS---------------QGVQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D                 Q +++  ++D     SH+    L S G
Sbjct: 2976 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSA--PLTSSG 3029

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3030 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3078



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3124 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3181

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3182 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3227

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3228 GSSHSVAWTTVDVAT 3242



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 395 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 439

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 440 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 471

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 472 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 526

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 527 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 563


>gi|91202109|emb|CAJ75169.1| hypothetical protein kuste4407 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 1590

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 125/258 (48%), Gaps = 36/258 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL   G V+ WG +  GQLG E+   K+++IP +V  + +++ +   A      
Sbjct: 570 GARHSLALKSNGTVWAWGNNGDGQLGDETT--KNRTIPAQVSNVNAITTIDGGAS----- 622

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HSLAL   G V+ WG +  GQLG  +  +K  + P ++ GL+ + +  AC 
Sbjct: 623 ---------HSLALKSDGTVWVWGANWDGQLGDGTNTRK--TTPVQISGLSDI-ISIACG 670

Query: 123 GYSHCLVLTSSGVVTCTHKEN-GCGSDPSQGVQSNLVQDSHTTIT-----------SLNS 170
            Y H + L S G V    + + G   D +   ++  VQ S  +             +L S
Sbjct: 671 MY-HSIALKSDGTVWAFGRNDYGQLGDGTNVYRNKPVQVSGLSDVIAIAGGDYHCLALKS 729

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
            G ++ WGNNE GQ+G + + T    P +V S+ N  +A IA G  HS  L KS   ++A
Sbjct: 730 DGIVWAWGNNESGQLG-DGTTTNRNTPVQVSSISN--VAAIARGWVHSLAL-KSDETVWA 785

Query: 231 FGIGSAVQLDSPKSVHKT 248
           +G   + QL    + ++T
Sbjct: 786 WGSNGSGQLGDGTTTNRT 803



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 99/249 (39%), Gaps = 48/249 (19%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H LAL   G V+ WG +  GQLG       +++ P +V  +++V+ +          
Sbjct: 720 GDYHCLALKSDGIVWAWGNNESGQLG--DGTTTNRNTPVQVSSISNVAAIAR-------- 769

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G  HSLAL     V+ WG +  GQLG    D  + +    V      +++    
Sbjct: 770 ------GWVHSLALKSDETVWAWGSNGSGQLG----DGTTTNRTTPVNITNINNIIAIAG 819

Query: 123 GYSHCLVLTSSGVV-TC-----THKENGCGS----------DPSQGVQSNL-VQDSHTTI 165
           G  + + L S G   TC      + EN   S          D   G+   + V      I
Sbjct: 820 GGGYTIALKSDGTGWTCGEYGWDYSENNGSSYWGYSYRTTPDQVAGINDVVAVAGGWQHI 879

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNL--------PIALIACGANH 217
             L   G ++TWG N YGQ+G     TT  +   V+  +NL        P   I+  +  
Sbjct: 880 VVLKQDGTVWTWGVNWYGQLG---DGTTTDRDTPVQVDINLGEMPDTFPPEGSISINSGV 936

Query: 218 SFVLSKSVS 226
           S+  S SV+
Sbjct: 937 SYTNSTSVT 945


>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
          Length = 4840

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3167

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3168 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3216

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G G+D     P   +G++   +   H  + +L+  
Sbjct: 3217 GAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3274

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3275 AVTDTGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 105/238 (44%), Gaps = 30/238 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G++FTWG   +G+LG    D + Q  PK V+ L    V+    G    
Sbjct: 4103 AGGAHSACITAAGDLFTWGKGRYGRLG--HGDSEDQLKPKLVEALQGYRVIDIACG---- 4156

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4157 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4208

Query: 122  AGYSHCLVLTSSGVVTC-----THKENGCGSDPS-------QGVQSNLVQDSHTT---IT 166
             G    + LT SG V        +   G GSD         QG+Q   V    T      
Sbjct: 4209 CGSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCV 4268

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                 GE+YTWG+N+ GQ+G   +N  + +P+ V +L    I  +ACG+ H+   S S
Sbjct: 4269 CCTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKINRVACGSAHTLAWSTS 4325



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3058 SGGRHAMALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3115

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3116 AAITSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3161

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3162 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3221

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + ++  V KPQ VE L    I  +A GA H   ++ + 
Sbjct: 3222 LALTKSGVVWTWGKGDYFRLG-HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDT- 3279

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3280 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3309



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL+  GEVF+WG    G+LG         ++P +  K ++++S  QA     H    
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLG------HGDTVPLEEPKMISALSGKQAGKHVVHI--- 557

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   Q+IP  V GL  + V+      
Sbjct: 558 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DQTIPMLVTGLKGLKVIDVS--- 610

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 611 --------------------CGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 637

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L I  + CG+  S  L+K   ++Y +G G   +L     
Sbjct: 638 LGRGGSDGCKT-PKLIEKLQDLDIVKVRCGSQFSIALTKD-GQVYTWGKGDNQRLGHGTE 695

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 696 EHVRYPKLLEG 706



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 61/253 (24%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H LAL+  GEV++WG    G+LG    ++     P+ ++ L  + VV   AG +H 
Sbjct: 4051 SGGKHCLALSSEGEVYSWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHS 4108

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +T+             G++FTWG   +G+LG    D + Q  PK V+ L    V+   
Sbjct: 4109 ACITA------------AGDLFTWGKGRYGRLG--HGDSEDQLKPKLVEALQGYRVI--- 4151

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
                                +  CGS  +Q +              L     +++WG+ +
Sbjct: 4152 --------------------DIACGSGDAQTL-------------CLTDDDTVWSWGDGD 4178

Query: 182  YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS-------VSRLY-AFGI 233
            YG++G   S+     P +++SL  L +  + CG+  S  L+KS       V R Y   G 
Sbjct: 4179 YGKLGRGGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGH 4237

Query: 234  GSAVQLDSPKSVH 246
            GS   +  P+ V 
Sbjct: 4238 GSDDHVRRPRQVQ 4250



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L++  VV+  A +S         G  H+
Sbjct: 3015 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSNY-VVKKVAVHS---------GGRHA 3063

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   +TSS
Sbjct: 3064 MALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3121

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3122 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3180

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3181 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3238

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3239 FRLGHGTDVHVRKPQVVEG 3257



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   Q+IP  V GL  + V+    G     
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DQTIPMLVTGLKGLKVIDVSCG----- 612

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + +V+   
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDIVKVRC 665

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G++   V D     T   +L
Sbjct: 666 GSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLAL 725

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 99/228 (43%), Gaps = 40/228 (17%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3014

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L++  V  V   +G  H + LT 
Sbjct: 3015 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTV 3068

Query: 133  SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN------------------SPGEL 174
             G V       G G D   G  S +  D    I +L                   S GEL
Sbjct: 3069 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3124

Query: 175  YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            YTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3125 YTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG    D   +  P+ V+GL    +V    G  HCL
Sbjct: 3217 GAQFSLALTKSGVVWTWGKGDYFRLG-HGTDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3274

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3275 AVT------------DTGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3320

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3321 GSSHSVAWTTVDVAT 3335



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+ LAS ++V+          + + +   H LAL+  GEVF+WG    G+LG     
Sbjct: 485 PQLVQSLASRNIVK----------IAAHSDGHHYLALSANGEVFSWGCGDGGRLG----- 529

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K ++++S  QA     H                  CGS           
Sbjct: 530 -HGDTVPLEEPKMISALSGKQAGKHVVHI----------------ACGS----------- 561

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G + S+   T P  V  L  L +  ++CG+  +
Sbjct: 562 ----TYSAAITAEGELYTWGRGNYGRLG-HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDA 616

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 653



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 22/179 (12%)

Query: 73   SLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
            +L+    G ++ WG +  GQLG +E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4006

Query: 132  SSGVVTCT---------HKENGCGSDPS--QGVQSNLVQDSHTT-----ITSLNSPGELY 175
            + G +  T                S P+  + +Q   ++            +L+S GE+Y
Sbjct: 4007 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4066

Query: 176  TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
            +WG  E G++G  N  +   +P+ +ESL  + +  +A G  HS  ++ +   L+ +G G
Sbjct: 4067 SWGEAEDGKLGHGN-RSPCDRPRVIESLRGIEVVDVAAGGAHSACIT-AAGDLFTWGKG 4123


>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 545

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 57/218 (26%)

Query: 5   WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHCLV 63
           +H+ AL++ G+VFT+G    G+LG  S  +++Q + K +  L    + Q AC G+     
Sbjct: 201 FHTAALSENGQVFTFGEGKFGRLGHNS--ERNQPVAKCIDALIGKRIKQVACGGF----- 253

Query: 64  LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG 123
                   H+ A+ + G VFTWGG  HGQLG    DK +Q IP RV+ L   +++Q   G
Sbjct: 254 --------HTAAVTESGHVFTWGGGEHGQLG--HGDKVNQIIPTRVESLIDKNIIQLTCG 303

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
           +SH + LT                                        GE++TWGN ++G
Sbjct: 304 WSHTVALT--------------------------------------DKGEVFTWGNGDHG 325

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
           ++G N++N  VT+P+ +E+  +  +  +A    H+  L
Sbjct: 326 KLGHNDTN-KVTEPKLIETFNSKRVISVASYNEHTVAL 362



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 127/261 (48%), Gaps = 35/261 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++ L D G+V+TWG    G+LG    D   + +P+ V+ L    V Q         
Sbjct: 42  GSGHTVVLTDDGKVYTWGRGDDGRLG--HGDNGWKFVPRLVEDLRDKKVRQV-------- 91

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
               T G +H+ A+   GE++TWGG  +G+LG    ++   S P  V+ +  + V Q   
Sbjct: 92  ----TCGSYHTAAVTVSGELYTWGGGMYGKLG--HGNENGHSTPSLVESIKGLYVRQVAC 145

Query: 123 GYSHCLV-LTSSGVVTCTHKENGC-GSDPSQGVQ------SNLVQDSHTTIT-------S 167
           G  H +V L +  V T   KENG  G   + G Q      S LV+ +   I+       +
Sbjct: 146 GSRHTVVLLENQDVYTWGDKENGVSGHGDTSGHQYSPYCVSELVEINIKQISACGFHTAA 205

Query: 168 LNSPGELYTWGNNEYGQMGINNS-NTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           L+  G+++T+G  ++G++G N+  N  V K   +++L+   I  +ACG  H+  +++S  
Sbjct: 206 LSENGQVFTFGEGKFGRLGHNSERNQPVAKC--IDALIGKRIKQVACGGFHTAAVTES-G 262

Query: 227 RLYAFGIGSAVQLDSPKSVHK 247
            ++ +G G   QL     V++
Sbjct: 263 HVFTWGGGEHGQLGHGDKVNQ 283



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 70/130 (53%), Gaps = 16/130 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+ A+ + G VFTWGG  HGQLG    DK +Q IP RV+ L   +++Q   G+SH  
Sbjct: 251 GGFHTAAVTESGHVFTWGGGEHGQLG--HGDKVNQIIPTRVESLIDKNIIQLTCGWSH-- 306

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     ++AL D GEVFTWG   HG+LG    +K ++  PK ++   S  V+   +
Sbjct: 307 ----------TVALTDKGEVFTWGNGDHGKLGHNDTNKVTE--PKLIETFNSKRVISVAS 354

Query: 123 GYSHCLVLTS 132
              H + L +
Sbjct: 355 YNEHTVALVN 364



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)

Query: 174 LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
           +YTWG  E GQ+G+ +++     P  VE+L +     I+CG+ H+ VL+    ++Y +G 
Sbjct: 3   VYTWGRGEDGQLGLGDTSDQY-HPILVEALQDRQTVQISCGSGHTVVLTDD-GKVYTWGR 60

Query: 234 GSAVQLDSPKSVHK-TPQLI 252
           G   +L    +  K  P+L+
Sbjct: 61  GDDGRLGHGDNGWKFVPRLV 80


>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
          Length = 4836

 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 108/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  L   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3108 GSSHSAPLTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3164

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3165 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3213

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3271

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3272 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    V+    G    
Sbjct: 4100 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVIDIACG---- 4153

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4154 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4205

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4206 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4266 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4321



 Score = 82.4 bits (202), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIQALKTKRIRDIAYGSSHS 3112

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3113 APLTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3158

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3219 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3276

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3277 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3306



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 557

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 558 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 609

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 610 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 637

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 638 LGRGGSDGCKT-PKLIEKLQDLDVIKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 695

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 696 EHVRYPKLLEG 706



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 122/259 (47%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V++ G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 3012 GKVYSCGEATNGRLGL-GMSSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3060

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSS 3118

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3119 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3177

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3178 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3235

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3236 FRLGHGSDVHVRKPQVVEG 3254



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4003

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4004 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4063

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 4064 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4121

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  I      G+           +++WG+ +YG++G 
Sbjct: 4122 YGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4181

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4182 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4239

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4240 RRPRQVQGLQGKKVIAIATG 4259



 Score = 72.4 bits (176), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 612

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + V++   
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVIKVRC 665

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T    L
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVL 725

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P     L +  I  IACG   SF  S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLGVTKPEPTAFPGLDSKHIVGIACGPAQSFAWS 778



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3011

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V++ G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3012 -----GKVYSCGEATNGRLGL-GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3065

Query: 133  SGVVTCTHKENGCGSDPS---------------QGVQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D                 Q +++  ++D     SH+    L S G
Sbjct: 3066 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSA--PLTSSG 3119

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3120 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3271

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3272 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3317

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3318 GSSHSVAWTTVDVAT 3332



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 485 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 529

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 530 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 561

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 562 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 616

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 653


>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 648

 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 123/253 (48%), Gaps = 36/253 (14%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL   G V+ WGG+  GQLG  S+D  S+  P RV+GL+ V  V A  G        
Sbjct: 7   HSLALRHDGTVWAWGGNALGQLGDGSSDSHSE--PVRVRGLSGVVAVSAGEG-------- 56

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 HSLAL+  G V+ WG +  GQLG  ++D  S+  P RV GL+   VV   AG +
Sbjct: 57  ------HSLALHRDGTVWAWGDNALGQLGDGTSDSHSE--PVRVPGLS--GVVAVSAGDN 106

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV----QDSHTTIT---------SLNSPG 172
           H L L S G V      N      + G QS  V    +D    +          ++ + G
Sbjct: 107 HSLALRSDGSVWAWGDNNSDQLGGAPGAQSYSVPWRLEDLSEVVAVAAGGNHSLAVRADG 166

Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
            ++ WG+N  GQ+G  N  TT   P++V+ L  +  A  + G  HS V + S   ++A+G
Sbjct: 167 TVWAWGDNFAGQLGDGNILTTRWLPKQVQGLSGVVAA--SAGWAHSMV-ALSDGSVWAWG 223

Query: 233 IGSAVQLDSPKSV 245
             ++ QL +  SV
Sbjct: 224 NNTSGQLGNGISV 236



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 112/239 (46%), Gaps = 36/239 (15%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLA+   G V+ WG +  GQLG  S    ++  P RV+GL+ V+ V A           
Sbjct: 410 HSLAVLSDGSVWAWGYNRQGQLGDGSLSSSAE--PVRVQGLSGVAAVSA----------- 456

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              GL HSLA    G V+ WGG++ GQLG       +  +P RV+GL+ V  +   AG++
Sbjct: 457 ---GLNHSLARGTDGGVWAWGGNSFGQLG--EGTTSNALVPVRVRGLSGVETI--SAGFN 509

Query: 126 HCLVLTSSGVVTCTHKE------NGCGSDPSQGVQSNLVQDSHTTITSLN------SPGE 173
           H L   S G +            +G  S+ S  V+   +         LN      + G 
Sbjct: 510 HSLARASDGGLWAWGGNYTGQLGDGTTSNSSVPVRVQGLSGVAAVFAGLNHSLAVRTDGS 569

Query: 174 LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           ++ WG N +GQ+G   +NT+   P RV+ L  +    +A G+ HS  +    S ++++G
Sbjct: 570 VWAWGINSFGQLGEGTTNTSFA-PVRVQGLSGMET--VAAGSLHSLSVGSDGS-MWSWG 624



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 95/197 (48%), Gaps = 32/197 (16%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            GL HSLA    G V+ WGG++ GQLG       +  +P RV+GL+ V  +   AG++H 
Sbjct: 456 AGLNHSLARGTDGGVWAWGGNSFGQLG--EGTTSNALVPVRVRGLSGVETI--SAGFNHS 511

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L   S  GLW             WGG+  GQLG       + S+P RV+GL+ V+ V   
Sbjct: 512 LARASDGGLW------------AWGGNYTGQLG--DGTTSNSSVPVRVQGLSGVAAV--F 555

Query: 122 AGYSHCLVLTSSGVVTC----THKENGCGSDPS-------QGVQS-NLVQDSHTTITSLN 169
           AG +H L + + G V      +  + G G+  +       QG+     V        S+ 
Sbjct: 556 AGLNHSLAVRTDGSVWAWGINSFGQLGEGTTNTSFAPVRVQGLSGMETVAAGSLHSLSVG 615

Query: 170 SPGELYTWGNNEYGQMG 186
           S G +++WGNN +GQ+G
Sbjct: 616 SDGSMWSWGNNHHGQLG 632



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 127/333 (38%), Gaps = 108/333 (32%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLA+   G V+ WG +  GQLG +     ++ +PK+V+GL+ V  V A AG++H +V  
Sbjct: 158 HSLAVRADGTVWAWGDNFAGQLG-DGNILTTRWLPKQVQGLSGV--VAASAGWAHSMVAL 214

Query: 66  STTGLW---------------------------------------HSLALNDCGEVFTWG 86
           S   +W                                       +SLAL   G ++ WG
Sbjct: 215 SDGSVWAWGNNTSGQLGNGISVGYGALPEQVQGLRGVMAVAAGGLYSLALRSDGTLWAWG 274

Query: 87  GDTHGQLG------------------------------------------------LESA 98
            + HGQ G                                                L   
Sbjct: 275 SNDHGQRGDGSTVYLSSSVRVRWLSGVVAMAAGSAHSLAVRSDGTLWAWGANYYGQLGDG 334

Query: 99  DKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV-TCTHKENGC---GSDPSQGVQ 154
            +K    PKRV+GL+   VV   AG  H + L + G V T  +  +G    GS     V 
Sbjct: 335 TRKDHDTPKRVQGLS--RVVAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDSPVP 392

Query: 155 ------SNLVQDSHTTITSLN--SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNL 206
                 S +V  +   + SL   S G ++ WG N  GQ+G + S ++  +P RV+ L   
Sbjct: 393 LHVRELSGVVAVAAGALHSLAVLSDGSVWAWGYNRQGQLG-DGSLSSSAEPVRVQGLSG- 450

Query: 207 PIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
            +A ++ G NHS         ++A+G  S  QL
Sbjct: 451 -VAAVSAGLNHSLARGTD-GGVWAWGGNSFGQL 481


>gi|402580770|gb|EJW74719.1| hypothetical protein WUBG_14371, partial [Wuchereria bancrofti]
          Length = 269

 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/105 (48%), Positives = 71/105 (67%), Gaps = 4/105 (3%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCF-LIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
           YG+ TE EE+  IWFS    E   + F L+G LC LAIYN  +++ PFPLALYKKILD P
Sbjct: 82  YGMFTENEESHLIWFS--GVETDPLSFKLVGMLCALAIYNSVLVDFPFPLALYKKILDVP 139

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSD 822
           + L+DL +LSP   +SL+ +LDY + ++E++F +TF     L+ D
Sbjct: 140 LELEDLSELSPAEGRSLRSLLDYEDDNVEEIFCLTFMISVSLLGD 184



 Score = 88.2 bits (217), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/170 (36%), Positives = 76/170 (44%), Gaps = 58/170 (34%)

Query: 977  TFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEE 1036
            +  PH    + E+ V RDNIV+D +  L      D KKPLKV             F GEE
Sbjct: 14   SLQPHP---FFELSVHRDNIVDDAMIALLSSKRMDLKKPLKV------------YFIGEE 58

Query: 1037 AEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCT 1096
            A+DAGGV++EF MLL +E+L  KYGMF E EE+  IWFS             G E  P +
Sbjct: 59   ADDAGGVKKEFFMLLFQELLQAKYGMFTENEESHLIWFS-------------GVETDPLS 105

Query: 1097 YISKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYT-VRFP 1145
            +                              L+G LC LAIYN   V FP
Sbjct: 106  FK-----------------------------LVGMLCALAIYNSVLVDFP 126


>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
           caballus]
          Length = 551

 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 95/231 (41%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV   A    C 
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVVNIACGQMC- 216

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ D GEV+ WG   +GQLGL      +Q  P RV  L  + V +A  
Sbjct: 217 ----------SMAVVDTGEVYVWGYSGNGQLGL--GGSGNQPTPCRVAALQGIRVQRAAC 264

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 265 GYAHTLVLTDE--------------------------------------GQVYVWGANSY 286

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN     P  VE   +  I + AC + H+         +Y +G
Sbjct: 287 GQLGTGNKSNQPYPTPIIVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 50.8 bits (120), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L    V  AC  Y           
Sbjct: 63  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLTGKKV--ACLSY----------- 105

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P            H  + +  S GE++TWG+N Y Q+G   +N  + 
Sbjct: 106 ----------GSGP------------HVVLAT--SEGEVFTWGHNAYSQLGNGTTNHGLV 141

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  + ++  P+ + G
Sbjct: 142 PCHISTNLSNKRVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG 200


>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
          Length = 4285

 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 2811 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 2867

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  ++P+ ++ L    V Q   
Sbjct: 2868 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNVPQNIERLNGQGVCQIEC 2916

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G GSD     P   +G++   +   H  + +L+  
Sbjct: 2917 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 2974

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 2975 AVTDAGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3027



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 2758 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 2815

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 2816 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 2861

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      V  N+ + +   +          
Sbjct: 2862 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFS 2921

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + S+  V KPQ VE L    I  +A GA H   ++ + 
Sbjct: 2922 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA- 2979

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 2980 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3009



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 104/234 (44%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 612

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G    LA+ D G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 613 -----SGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 665

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSL 168
           G    + LT  G V    K +    G G++            QG +   V    T   +L
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLAL 725

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WGNN+  Q   +  + T  +P  +  L    I  IACG   SF  S
Sbjct: 726 TEDSEVHSWGNNDQCQH-FDTLHQTKPEPSLLPGLDTKHIVGIACGPAQSFAWS 778



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 113/250 (45%), Gaps = 53/250 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 557

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 558 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVA--- 610

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS  +Q +             ++   G++++WG+ +YG+
Sbjct: 611 --------------------CGSGDAQPL-------------AVTDNGQVWSWGDGDYGK 637

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 638 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSVALTKD-GQVYSWGKGDNQRLGHGTE 695

Query: 245 VH-KTPQLIH 253
            H + P+L+ 
Sbjct: 696 EHVRYPKLLE 705



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 100/233 (42%), Gaps = 29/233 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 3777 AGGAHSACVTSAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDVACG---- 3830

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P +V    S+ V +  
Sbjct: 3831 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKVP--LSLRVGRPS 3880

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCGSDPS-------QGVQSNLVQDSHTT---ITSLNSP 171
                    L   G     +   G GSD         QG+Q   V    T           
Sbjct: 3881 TPPPSWPRLDVGG--KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEE 3938

Query: 172  GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
            GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 3939 GEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGRKVNRVACGSAHTLAWSTS 3990



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 52/209 (24%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP++V  L+S  VV+  A +S         G  H+
Sbjct: 2715 GKVYACGEATNGRLGL-GMSSGTVPIPRQVTALSSY-VVKKVAVHS---------GGRHA 2763

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
             AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 2764 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 2821

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            G                                      ELYTWG  EYG++G +  NTT
Sbjct: 2822 G--------------------------------------ELYTWGLGEYGRLG-HGDNTT 2842

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLS 222
              KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 2843 QLKPKMVKVLLGHRVIQVACGSRDAQTLA 2871



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 117/260 (45%), Gaps = 27/260 (10%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H LAL+  GEV++WG    G+LG    ++     P+ V+ L    VV   AG +H 
Sbjct: 3725 SGGKHCLALSSEGEVYSWGEAEDGKLG--HGNRSPCDRPRVVESLRGTEVVDIAAGGAHS 3782

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-A 120
              +TS             G+++TWG   +G+LG   +D + Q  PK V+ L    VV  A
Sbjct: 3783 ACVTSA------------GDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDVA 3828

Query: 121  C-AGYSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQSNLVQDSHTTITSLNSP----GE 173
            C +G +  L LT    V +    + G  G   S G +  +       +   ++P      
Sbjct: 3829 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPR 3888

Query: 174  LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
            L   G  +Y ++G + S+  V +P++V+ L    +  IA G+ H    ++    +Y +G 
Sbjct: 3889 LDVGGKGDYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEE-GEVYTWGD 3946

Query: 234  GSAVQL-DSPKSVHKTPQLI 252
                QL D   +  + P+L+
Sbjct: 3947 NDEGQLGDGTTNAIQRPRLV 3966



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 96/258 (37%), Gaps = 87/258 (33%)

Query: 7    SLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQLG +E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3624 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 3680

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 3681 ADGKLYATGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVY 3740

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
            +WG    G+LG    ++     P+ V+ L    VV   AG +H   +TS+G         
Sbjct: 3741 SWGEAEDGKLG--HGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVTSAG--------- 3789

Query: 144  GCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESL 203
                                         +LYTWG   YG++G ++S   + KP+ VE+L
Sbjct: 3790 -----------------------------DLYTWGKGRYGRLGHSDSEDQL-KPKLVEAL 3819

Query: 204  VNLPIALIACGANHSFVL 221
                +  +ACG+  +  L
Sbjct: 3820 QGHRVVDVACGSGDAQTL 3837



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 2917 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 2974

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 2975 AVT------------DAGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3020

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  + T
Sbjct: 3021 GSSHSVAWTTVDMAT 3035



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 485 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 529

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 530 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 561

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 562 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 616

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 617 QPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 653



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 19/147 (12%)

Query: 105  IPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP------- 149
            +P   + L++++VVQ   G      +T  G V  C    NG        G+ P       
Sbjct: 2686 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQVTA 2745

Query: 150  --SQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLP 207
              S  V+   V       T+L   G++++WG  + G++G + S     KP+ +E+L    
Sbjct: 2746 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKR 2804

Query: 208  IALIACGANHSFVLSKSVSRLYAFGIG 234
            I  IACG++HS  L+ S   LY +G+G
Sbjct: 2805 IRDIACGSSHSAALTSS-GELYTWGLG 2830


>gi|340379689|ref|XP_003388359.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 1950

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 33/234 (14%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLA++  G+V++WG   +G+LG    +  +Q  PK + GL++  +     G  H   +T
Sbjct: 166 HSLAVDKNGKVYSWGEGEYGKLG--HGNNTTQKTPKLIAGLSNKVIRSVSCGNRHSAAVT 223

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLG------LESADKKSQSIPKRVKGLASVSVVQ 119
               LW            TWG   HG+LG      L   D + Q  PK ++ L    + +
Sbjct: 224 IDNELW------------TWGEGEHGRLGHGDTGRLGHGDTQKQIKPKVIEALKGQLIQK 271

Query: 120 ACAGYSHCLVLTSSGVVTCTHKENGCG--------SDPS--QGVQSNLVQDSHTT---IT 166
             A     + LT +G +    K +G G        S P   Q +   ++ D  T      
Sbjct: 272 VSAANQFSIALTKTGKLYSFGKGSGTGLGTPDTSYSTPQLIQSLADVIIIDVTTGDGHCL 331

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
           +L   G++Y WG N  GQ G  ++N +++KP +VE L  + +  I+ G +HS V
Sbjct: 332 ALTQRGDVYGWGTNSMGQCGQGHNNNSISKPGKVEGLDGVQVQQISAGTSHSIV 385



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 103/241 (42%), Gaps = 58/241 (24%)

Query: 20  GGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDC 79
           G  ++G+LGL ++D   Q+  K +      ++V++ A        TS     HSLA++  
Sbjct: 124 GKGSYGRLGLGTSD--VQTSIKDLDTFPEGTLVKSMA--------TSRGSDGHSLAVDKN 173

Query: 80  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCT 139
           G+V++WG   +G+LG    +  +Q  PK + GL++  +     G  H   +T        
Sbjct: 174 GKVYSWGEGEYGKLG--HGNNTTQKTPKLIAGLSNKVIRSVSCGNRHSAAVTIDN----- 226

Query: 140 HKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNS-------NT 192
                                            EL+TWG  E+G++G  ++         
Sbjct: 227 ---------------------------------ELWTWGEGEHGRLGHGDTGRLGHGDTQ 253

Query: 193 TVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLI 252
              KP+ +E+L    I  ++     S  L+K+  +LY+FG GS   L +P + + TPQLI
Sbjct: 254 KQIKPKVIEALKGQLIQKVSAANQFSIALTKT-GKLYSFGKGSGTGLGTPDTSYSTPQLI 312

Query: 253 H 253
            
Sbjct: 313 Q 313



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 16/126 (12%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           S+AL   G+++++G  +   LG       S S P+ ++ LA V ++    G  HCL LT 
Sbjct: 279 SIALTKTGKLYSFGKGSGTGLGTPDT---SYSTPQLIQSLADVIIIDVTTGDGHCLALTQ 335

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
                        G+V+ WG ++ GQ G +  +  S S P +V+GL  V V Q  AG SH
Sbjct: 336 R------------GDVYGWGTNSMGQCG-QGHNNNSISKPGKVEGLDGVQVQQISAGTSH 382

Query: 127 CLVLTS 132
            +V T+
Sbjct: 383 SIVWTA 388



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 7/77 (9%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           TG  H LAL   G+V+ WG ++ GQ G +  +  S S P +V+GL  V V Q  AG SH 
Sbjct: 325 TGDGHCLALTQRGDVYGWGTNSMGQCG-QGHNNNSISKPGKVEGLDGVQVQQISAGTSHS 383

Query: 62  LVLTS------TTGLWH 72
           +V T+       T +WH
Sbjct: 384 IVWTAIPNDRCATAVWH 400


>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
          Length = 551

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 98/231 (42%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     V           
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTVNQPIPRRVTGCLQNKV----------- 206

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V+T   G    +A+ D GEV+ WG + +GQLGL S+   +Q  P RV  L  + V +   
Sbjct: 207 VVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSG--NQPTPCRVAALQGIRVQRVAC 264

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 265 GYAHTLVLTDE--------------------------------------GQVYAWGANSY 286

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  +E   +  I + AC + H+         +Y +G
Sbjct: 287 GQLGTGNKSNQSYPTPVTMEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 2/86 (2%)

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           + GE++TWG+N Y Q+G   +N  +   Q   +L N  +  +ACG+ HS VL+ S   ++
Sbjct: 116 TEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLT-SDGEVF 174

Query: 230 AFGIGSAVQLDSPKSVHK-TPQLIHG 254
           A+G  ++ Q+ S  +V++  P+ + G
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTG 200


>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
           queenslandica]
          Length = 4694

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 115/243 (47%), Gaps = 40/243 (16%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + G ++TWG  ++G+LG  +A+ K   IP  V+GL  V +VQ   G    
Sbjct: 567 AGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDK--LIPTIVEGLNGVKIVQVDCG---- 620

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS-VVQA 120
                 +G  H+LAL+D G+V++WG   +G+LG   +D+    +PK + G+ S S VV+ 
Sbjct: 621 ------SGDAHTLALDDTGQVWSWGDGDYGKLGRPGSDQ--NKVPKPISGIGSTSPVVKI 672

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQG-------VQSNLVQDSHTTITS------ 167
             G    + LT  G +       GCG     G        Q  L++    T+ S      
Sbjct: 673 ICGNQISMALTKDGKLYSW----GCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGA 728

Query: 168 -----LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV-L 221
                L +  ++Y WG N      +N S   ++ P  +E+       LIACGA+ +FV  
Sbjct: 729 QHCVALTTDSDVYAWGKNS--SFEVNESGDIISSPLMIEAASGKGALLIACGASETFVSF 786

Query: 222 SKS 224
           SKS
Sbjct: 787 SKS 789



 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 103/262 (39%), Gaps = 84/262 (32%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV-VQACAGYSHC 61
            G  HS A++  GE+FTWG    G+LG    D  +Q+ PK V+ L  V +   AC   +  
Sbjct: 3072 GTGHSAAVSVNGELFTWGQGADGRLG--HGDSNNQTKPKLVRALEKVRISCVACGSRNAH 3129

Query: 62   LVLTSTTGLWH----------------------------------------SLALNDCGE 81
             +      LW                                         S+ L   G+
Sbjct: 3130 TLAAGDNSLWAWGDGSFGKLGLKDGSSSTDVPVQVITFPSNIIQIECGMHFSVLLTKEGK 3189

Query: 82   VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHK 141
            V+TWG   + +LG +S     Q IP  V GLAS ++ Q   G  HCL LTSSG       
Sbjct: 3190 VYTWGKGEYYRLGNDST--SVQPIPTLVDGLASKTITQVAVGALHCLALTSSG------- 3240

Query: 142  ENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVE 201
                                           E+Y+WG+NE+GQ G NNS     KPQ V 
Sbjct: 3241 -------------------------------EVYSWGDNEHGQQG-NNSTICNRKPQIVA 3268

Query: 202  SLVNLPIALIACGANHSFVLSK 223
            SL    I  IACG++HS   ++
Sbjct: 3269 SLKGHRICKIACGSSHSIAFAQ 3290



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 135/298 (45%), Gaps = 65/298 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL   G+V++WG  ++G LG+   + +SQ+ P  V  L+   +V   AG        
Sbjct: 519 HILALTKDGKVYSWGQGSNGVLGI--GNTESQTAPTAVAALSGDRIVHISAGS------- 569

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 HS A+ + G ++TWG  ++G+LG  +A+ K   IP  V+GL  V +VQ      
Sbjct: 570 -----MHSAAVTEDGVLYTWGKGSYGRLGHGNAEDK--LIPTIVEGLNGVKIVQV----- 617

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CGS            D+HT   +L+  G++++WG+ +YG++
Sbjct: 618 ------------------DCGSG-----------DAHT--LALDDTGQVWSWGDGDYGKL 646

Query: 186 GINNSNTTVTKPQRVESLVNL-PIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           G   S+     P+ +  + +  P+  I CG   S  L+K   +LY++G G   QL     
Sbjct: 647 GRPGSDQNKV-PKPISGIGSTSPVVKIICGNQISMALTKD-GKLYSWGCGDTYQLGHGNQ 704

Query: 245 VH-KTPQLIHG--PWIASPVAMTAGEDSLVSHSGGLVV-KKIYSGGDHSIVTVTKSSD 298
            H + P+LI G    + S V++ A       H   L     +Y+ G +S   V +S D
Sbjct: 705 EHVRQPKLIEGLSETVVSDVSVGA------QHCVALTTDSDVYAWGKNSSFEVNESGD 756



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 105/241 (43%), Gaps = 30/241 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  + D G ++TWG   +G+LG    D ++Q  PK V  L    V     G     
Sbjct: 3983 GSSHSACITDDGSLYTWGKGRYGRLG--HNDHETQHKPKLVSALKGEQVTCVACGSGDAQ 4040

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             L +T            G VF+WG   +G+LG      +   +PK++  L    V++   
Sbjct: 4041 TLCATA----------SGCVFSWGDGDYGKLG--RGGNEGSKVPKKIDSLTGKHVIKLLC 4088

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQ-DSHTTITSLN-------- 169
            G    + LT++G V    K +    G G D  Q     ++   +H  +  +         
Sbjct: 4089 GSQFSMALTTAGHVYTWGKGDYYRLGHGDDSHQRTPRRVLGLLAHENVIDIGCGSLHCIV 4148

Query: 170  --SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
                G++++WG+N+ GQ+G N++   V+ P+R+    N+ I  +ACG+ HS   S     
Sbjct: 4149 CTESGKVFSWGDNDEGQIG-NDTTQAVSVPKRINITDNICIDHVACGSAHSIAWSSKQRN 4207

Query: 228  L 228
            L
Sbjct: 4208 L 4208



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 126/267 (47%), Gaps = 42/267 (15%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLG---LESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            H LA+   G+VF+WG   +GQLG   L+S D+     PK ++      + QA     H  
Sbjct: 3023 HVLAVTADGKVFSWGDGQYGQLGHGSLQSYDR-----PKMIE------IFQA----KHIR 3067

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             ++  TG  HS A++  GE+FTWG    G+LG    D  +Q+ PK V+ L  V +     
Sbjct: 3068 EVSCGTG--HSAAVSVNGELFTWGQGADGRLG--HGDSNNQTKPKLVRALEKVRISCVAC 3123

Query: 123  GYSHCLVLTSS---------GVVTCTHKENGCGSD--PSQGVQ--SNLVQ---DSHTTIT 166
            G  +   L +          G       ++G  S   P Q +   SN++Q     H ++ 
Sbjct: 3124 GSRNAHTLAAGDNSLWAWGDGSFGKLGLKDGSSSTDVPVQVITFPSNIIQIECGMHFSVL 3183

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
             L   G++YTWG  EY ++G N+S +    P  V+ L +  I  +A GA H   L+ S  
Sbjct: 3184 -LTKEGKVYTWGKGEYYRLG-NDSTSVQPIPTLVDGLASKTITQVAVGALHCLALTSS-G 3240

Query: 227  RLYAFGIGSAVQLDSPKSV-HKTPQLI 252
             +Y++G     Q  +  ++ ++ PQ++
Sbjct: 3241 EVYSWGDNEHGQQGNNSTICNRKPQIV 3267



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 41/269 (15%)

Query: 8    LALNDCGEVFTWGGDTHGQLGLESADKKSQSIP---KRVKGLASVSVVQACAGYSHCLVL 64
             A+ D G+V+  G   HG+LG+ S+D  +   P      +G+A V  +   +G  HCL +
Sbjct: 3880 FAVTDDGKVYASGYAAHGRLGIGSSDNVATPTPLTSLATRGIA-VKKIAIHSGGKHCLAV 3938

Query: 65   TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
            T+             GE++ WG    G+LGL +    + ++P  ++ L S  V+ A  G 
Sbjct: 3939 TTQ------------GELYAWGEGEDGKLGLGTT--VNMNVPHLIESLKSKHVIDAGCGS 3984

Query: 125  SHCLVLTSSGVV---------TCTHKENGCGSDPS-----QGVQSNLVQ----DSHTTIT 166
            SH   +T  G +            H ++     P      +G Q   V     D+ T   
Sbjct: 3985 SHSACITDDGSLYTWGKGRYGRLGHNDHETQHKPKLVSALKGEQVTCVACGSGDAQTLCA 4044

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +  + G +++WG+ +YG++G    N     P++++SL    +  + CG+  S  L+ +  
Sbjct: 4045 T--ASGCVFSWGDGDYGKLG-RGGNEGSKVPKKIDSLTGKHVIKLLCGSQFSMALT-TAG 4100

Query: 227  RLYAFGIGSAVQLDSPKSVH-KTPQLIHG 254
             +Y +G G   +L      H +TP+ + G
Sbjct: 4101 HVYTWGKGDYYRLGHGDDSHQRTPRRVLG 4129



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 118/240 (49%), Gaps = 38/240 (15%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG + ++ K +S P   + LA +  +Q  AG S C           S 
Sbjct: 2925 KVFVWGLNDMRQLGTDLSEAKVKS-PIESRTLARLHPIQ-FAGGSKC-----------SF 2971

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASV---SVVQACAGYSHCLVLT 131
             ++D G+VF  G  + G+LG+      +  +P ++  L+      V  +CAG  H L +T
Sbjct: 2972 VVSDDGKVFACGEGSSGRLGI--GGFANIRMPHQISSLSMYVVRKVAVSCAGR-HVLAVT 3028

Query: 132  SSGVV----TCTHKENGCGSDPS-------QGVQSNLVQD-----SHTTITSLNSPGELY 175
            + G V       + + G GS  S       +  Q+  +++      H+   S+N  GEL+
Sbjct: 3029 ADGKVFSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVN--GELF 3086

Query: 176  TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
            TWG    G++G  +SN   TKP+ V +L  + I+ +ACG+ ++  L+   + L+A+G GS
Sbjct: 3087 TWGQGADGRLGHGDSNNQ-TKPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGS 3145



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 39/250 (15%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H LA+   GE++ WG    G+LGL +    + ++P  ++ L S  V+ A  G SH 
Sbjct: 3930 SGGKHCLAVTTQGELYAWGEGEDGKLGLGTT--VNMNVPHLIESLKSKHVIDAGCGSSHS 3987

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQ 119
              +T            D G ++TWG   +G+LG    D ++Q  PK V  L    V+ V 
Sbjct: 3988 ACIT------------DDGSLYTWGKGRYGRLG--HNDHETQHKPKLVSALKGEQVTCVA 4033

Query: 120  ACAGYSHCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTI---------- 165
              +G +  L  T+SG V       + + G G +    V   +  DS T            
Sbjct: 4034 CGSGDAQTLCATASGCVFSWGDGDYGKLGRGGNEGSKVPKKI--DSLTGKHVIKLLCGSQ 4091

Query: 166  --TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLV-NLPIALIACGANHSFVLS 222
               +L + G +YTWG  +Y ++G  + +   T P+RV  L+ +  +  I CG+ H  V +
Sbjct: 4092 FSMALTTAGHVYTWGKGDYYRLGHGDDSHQRT-PRRVLGLLAHENVIDIGCGSLHCIVCT 4150

Query: 223  KSVSRLYAFG 232
            +S  +++++G
Sbjct: 4151 ES-GKVFSWG 4159



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 101/241 (41%), Gaps = 42/241 (17%)

Query: 16   VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
            VF WG +  GQLG    +K              V   + C   S       T G     A
Sbjct: 3836 VFGWGHNHRGQLGGIEGNK--------------VKSPRLCESLSELNPAMITGGEQTLFA 3881

Query: 76   LNDCGEVFTWGGDTHGQLGLESADKKSQSIP---KRVKGLASVSVVQACAGYSHCLVLTS 132
            + D G+V+  G   HG+LG+ S+D  +   P      +G+A V  +   +G  HCL +T+
Sbjct: 3882 VTDDGKVYASGYAAHGRLGIGSSDNVATPTPLTSLATRGIA-VKKIAIHSGGKHCLAVTT 3940

Query: 133  SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSP------------------GEL 174
             G +       G G D   G+ + +  +    I SL S                   G L
Sbjct: 3941 QGELYAW----GEGEDGKLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITDDGSL 3996

Query: 175  YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR-LYAFGI 233
            YTWG   YG++G +N + T  KP+ V +L    +  +ACG+  +  L  + S  ++++G 
Sbjct: 3997 YTWGKGRYGRLG-HNDHETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGD 4055

Query: 234  G 234
            G
Sbjct: 4056 G 4056



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 17/133 (12%)

Query: 1    MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGL-ASVSVVQACAGYS 59
            + G   S+AL   G V+TWG   + +LG    D   Q  P+RV GL A  +V+    G  
Sbjct: 4087 LCGSQFSMALTTAGHVYTWGKGDYYRLG--HGDDSHQRTPRRVLGLLAHENVIDIGCGSL 4144

Query: 60   HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ 119
            HC+V T            + G+VF+WG +  GQ+G ++   ++ S+PKR+    ++ +  
Sbjct: 4145 HCIVCT------------ESGKVFSWGDNDEGQIGNDTT--QAVSVPKRINITDNICIDH 4190

Query: 120  ACAGYSHCLVLTS 132
               G +H +  +S
Sbjct: 4191 VACGSAHSIAWSS 4203


>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
          Length = 527

 Score = 94.4 bits (233), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 99/231 (42%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEV+ WG +  GQ+G  S    +Q+IP+RV G     VV   A    C 
Sbjct: 136 GSYHSLVLTSDGEVYAWGYNNSGQVG--SGSTANQAIPRRVTGCLQNKVVVNIACGQMC- 192

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ D GEV+ WG + +GQLGL S+   +Q  P RV  L  + V +   
Sbjct: 193 ----------SVAVVDTGEVYVWGYNGNGQLGLGSSG--NQPTPCRVAALQGIRVQRVAC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G++H LVLT                                        G++Y WG N Y
Sbjct: 241 GFAHTLVLTDE--------------------------------------GQVYAWGANSY 262

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 263 GQLGTGNKSNQSYPTPVVVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 113/269 (42%), Gaps = 59/269 (21%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHCLVLTSTTGLWH 72
           GEVFTWG + + QLG  +       +P +V   L++  V++   G  H LVLTS      
Sbjct: 94  GEVFTWGHNGYTQLG--NGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSD----- 146

Query: 73  SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 132
                  GEV+ WG +  GQ+G  S    +Q+IP+RV G     VV   A    C  + S
Sbjct: 147 -------GEVYAWGYNNSGQVG--SGSTANQAIPRRVTGCLQNKVVVNIA----CGQMCS 193

Query: 133 SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNT 192
             VV                                   GE+Y WG N  GQ+G+ +S  
Sbjct: 194 VAVV---------------------------------DTGEVYVWGYNGNGQLGLGSSGN 220

Query: 193 TVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK---TP 249
             T P RV +L  + +  +ACG  H+ VL+    ++YA+G  S  QL +    ++   TP
Sbjct: 221 QPT-PCRVAALQGIRVQRVACGFAHTLVLTDE-GQVYAWGANSYGQLGTGNKSNQSYPTP 278

Query: 250 QLIHGPWIASPVAMTAGEDSLVSHSGGLV 278
            ++    I    A  +   S     GG V
Sbjct: 279 VVVEKDRIIEIAACHSTHTSAAKTQGGHV 307


>gi|124804612|ref|XP_001348055.1| UVB-resistance protein UVR8 homologue [Plasmodium falciparum 3D7]
 gi|23496310|gb|AAN35968.1| UVB-resistance protein UVR8 homologue [Plasmodium falciparum 3D7]
          Length = 425

 Score = 94.4 bits (233), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 143/317 (45%), Gaps = 45/317 (14%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLE-SADKKSQS---IPKRVKGLASVSVVQACAG 57
            G  HS  + D G++FT+G +  GQLG     ++KSQ+   IPK VK    +     C G
Sbjct: 79  AGCNHSAFIID-GKIFTYGLNDKGQLGRTLDGNEKSQNYSLIPKEVKTNEDIKFTNVCCG 137

Query: 58  YSHCLVLTSTTGLWHSLALNDCGEVFTWGGDT-HGQLGLESADKKSQSIPKRVKGLAS-- 114
           Y H L +     L+           + WGG+   G  GL   +K + +IPKRV+   +  
Sbjct: 138 YKHTLAIDENNELYS----------WGWGGNLFKGANGLGQGNKNNINIPKRVETFKNED 187

Query: 115 VSVVQACAGYSHCLVLTSSG-VVTCTHKENGCGSDPSQG-----------VQSNL-VQD- 160
              +    G  H L LT +G V  C   E G     + G           V +N+ ++D 
Sbjct: 188 SEFINISCGEQHSLALTKNGKVYGCGKGEFGRLGKGNHGDQLFFEEIDYFVSNNIEIKDI 247

Query: 161 --SHTTITSLNSPGELYTWGNNEYGQMGINNS----NTTVTKPQRVE--SLVNLPIALIA 212
              H+   +L+  G++Y WG N+YGQ+GI NS     +    P +V+   + N+ I  IA
Sbjct: 248 SCGHSFSAALSKNGDVYVWGRNDYGQLGIENSIGDLYSHEVYPNKVKYFEIENIKIKYIA 307

Query: 213 CGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVS 272
           CG NH    S++ + +Y +G  + ++   PK++   P L     I   +       S   
Sbjct: 308 CGDNHMIACSEN-NIIYFWGSRAWLE---PKAITLNP-LYQNSLIKKNIEKIDAGGSTYY 362

Query: 273 HSGGLVVKKIYSGGDHS 289
           +S  L   K+YS G ++
Sbjct: 363 YSMLLSDYKLYSWGKYN 379


>gi|242802653|ref|XP_002484014.1| ubiquitin-protein ligase (Hul4), putative [Talaromyces stipitatus
            ATCC 10500]
 gi|218717359|gb|EED16780.1| ubiquitin-protein ligase (Hul4), putative [Talaromyces stipitatus
            ATCC 10500]
          Length = 1242

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 25/196 (12%)

Query: 898  GGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMD 957
            G   +  + FY   L    D+  D+  W +     + R   C YPF     AK+ +LE D
Sbjct: 771  GSTMIPLSTFYN-TLLDFSDLVSDFEAWEAR----TARFSFCQYPFFLSIAAKSRILEHD 825

Query: 958  QRIQMEHAMNQTNFYLFLQT-FNPHTLNQYLEVEVSRDNIVEDTIR---ELAQYTTNDFK 1013
             R QM     +     FL +  N   ++QYL ++V RD +VED++R   E+    + D K
Sbjct: 826  ARRQMNIKAREA----FLDSILNRKDVSQYLNLKVRRDCLVEDSLRGVSEVVGAGSEDIK 881

Query: 1014 KPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIW 1073
            K L++            +F GEE  DAGG+R+E+ +LL++E+ DP +G+F   ++++  +
Sbjct: 882  KSLRI------------EFIGEEGVDAGGLRKEWFLLLVREVFDPNHGLFVYDDDSQFCY 929

Query: 1074 FSEDTFEDQNMYFLIG 1089
            F+   FE    +FL+G
Sbjct: 930  FNPYCFESSEQFFLVG 945



 Score = 49.3 bits (116), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 16/111 (14%)

Query: 718  NHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL--- 774
            NH      ++++  +F+   FE     FL+G L GLAIYN TI+++  P   +KK+L   
Sbjct: 915  NHGLFVYDDDSQFCYFNPYCFESSEQFFLVGVLLGLAIYNSTILDVALPPFAFKKLLAAA 974

Query: 775  ----------DEPIL--LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                       +P    L DL +  P LAK L+ +L++ + D+++ F   F
Sbjct: 975  PSTNMPASAQRQPHTSSLDDLAEYRPALAKGLRALLEF-DGDVQETFCYDF 1024


>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
           troglodytes]
          Length = 552

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 97/231 (41%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV          
Sbjct: 163 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTVNQPIPRRVTGCLQNKVV---------- 210

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T   G    +A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L  + V +   
Sbjct: 211 -VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGL--GNSGNQPTPCRVAALQGIRVQRVAC 267

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT  G                                      ++Y WG N Y
Sbjct: 268 GYAHTLVLTDEG--------------------------------------QVYAWGANSY 289

Query: 183 GQMGINN-SNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 290 GQLGTGNKSNQSYPTPVTVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 338



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L    +  AC  Y           
Sbjct: 66  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGKKI--ACLSY----------- 108

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE++TWG+N Y Q+G   +N  + 
Sbjct: 109 ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNHGLV 144

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  +V++  P+ + G
Sbjct: 145 PCHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG 203


>gi|170030269|ref|XP_001843012.1| ubiquitin-protein ligase E3A [Culex quinquefasciatus]
 gi|167866448|gb|EDS29831.1| ubiquitin-protein ligase E3A [Culex quinquefasciatus]
          Length = 998

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 26/203 (12%)

Query: 896  PHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNG-----STRDF-LCNYPFIFDAKA 949
            PH    V Y  FY   L  V ++  DY  + +    G     S + F    Y FI     
Sbjct: 553  PH----VPYEEFYNEPLCDVIEMDHDYLNYKNTTSEGAFFADSAKKFSFMLYSFILTPAT 608

Query: 950  KTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIREL---AQ 1006
            KT  L  D RI+M ++  + +F          ++N +L++++ RD+I++D + EL   A 
Sbjct: 609  KTLALYYDSRIRM-YSERRLSFLHQQLGGGLQSVNPFLKLKIRRDHIIDDALVELEMIAM 667

Query: 1007 YTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEY 1066
                D KK L             V+F GE+  D GGV +EF  L+++EI +P YGMF  +
Sbjct: 668  SNPKDLKKQL------------VVEFSGEQGIDEGGVSKEFFQLIIEEIFNPDYGMFINH 715

Query: 1067 EETRSIWFSEDTFEDQNMYFLIG 1089
            E+T ++WF+  +FE++  + LIG
Sbjct: 716  EDTNTVWFNSTSFENEAQFTLIG 738



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 65/99 (65%), Gaps = 1/99 (1%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+   +E+T ++WF+  +FE++    LIG + GLAIYN  I+ + FP+ +Y+K++    
Sbjct: 709 YGMFINHEDTNTVWFNSTSFENEAQFTLIGIVLGLAIYNNIILAVNFPMVVYRKLMGMKG 768

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
              DL+D +P L  SL+ +LD+++ D+E+VF  TF+  Y
Sbjct: 769 SFADLEDWNPILFNSLKSMLDHQDNDMEEVFMQTFKICY 807


>gi|291401444|ref|XP_002717009.1| PREDICTED: hect domain and RLD 3-like [Oryctolagus cuniculus]
          Length = 974

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 146/343 (42%), Gaps = 81/343 (23%)

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           ++  T G +HSLAL+  GE+F WG ++HGQLG+      S   P+ V+ LA V +VQ  A
Sbjct: 130 IIQITCGDYHSLALSKGGELFAWGQNSHGQLGI-GVMCPSVPTPQIVEHLAGVPLVQISA 188

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H + L+ SG V                                      Y+WG N+ 
Sbjct: 189 GEAHSMTLSMSGNV--------------------------------------YSWGKNDL 210

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G+ ++    + P  +E+L N  +  +ACG +H+ +L++   +L+ FG G   QL   
Sbjct: 211 GQLGLGHTENKDS-PCLIEALDNQKVEFVACGGSHTALLTQD-GQLFTFGAGKYGQLGHK 268

Query: 243 KSVHKTPQLIHGPWIASPVAMTAG---------EDSLVSHSGGLVVKKIYSGGDHSIV-- 291
              ++    +    +A+ V   A          E S  S    +++    +GG+ SI+  
Sbjct: 269 SKRNELKPRLVTVLVANRVTQIACGRTILNSDVEKSRTSEKELIMI----AGGNQSILLW 324

Query: 292 TVTKSSDGVLSDDFRVLNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
              K+S   L      LN +T    I DV  ++ +  +RE+ +                 
Sbjct: 325 MDKKNSYVNLRRKIPTLNESTIKRWIADVGTKQWQNTKREIRE----------------- 367

Query: 349 VFLSPGCMNGSFLQVENDE-----HFSCNSKKFSFIKLSLINW 386
           +F S  C+ GSFL+          H   N  + +F +L+  +W
Sbjct: 368 IFTSSACLTGSFLRQRKAAEPKSVHVDLNIARNAFKELTQKDW 410



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 61/96 (63%), Gaps = 1/96 (1%)

Query: 719 HYGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            YG+  Y EE   +WF      ++   F  G LCGL+++N  + N+ FPLAL+KK+LD+ 
Sbjct: 691 EYGMFMYPEEASFMWFPAKPKFEEKRYFFFGILCGLSLFNCNVANLSFPLALFKKLLDQK 750

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
             L+DLK+LSP L KSL+++LD    D E++F I F
Sbjct: 751 PSLEDLKELSPVLGKSLEELLDNESSDFEELFYIHF 786



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 54/212 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG ++HGQLG+      S   P+ V+ LA V +VQ  AG +H +
Sbjct: 136 GDYHSLALSKGGELFAWGQNSHGQLGI-GVMCPSVPTPQIVEHLAGVPLVQISAGEAHSM 194

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            L+ +            G V++WG +  GQLGL   + K    P  ++ L +  V     
Sbjct: 195 TLSMS------------GNVYSWGKNDLGQLGLGHTENKDS--PCLIEALDNQKVEFVAC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH  +LT                           QD           G+L+T+G  +Y
Sbjct: 241 GGSHTALLT---------------------------QD-----------GQLFTFGAGKY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACG 214
           GQ+G + S     KP+ V  LV   +  IACG
Sbjct: 263 GQLG-HKSKRNELKPRLVTVLVANRVTQIACG 293



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 101/454 (22%), Positives = 179/454 (39%), Gaps = 80/454 (17%)

Query: 95  LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQ 154
           L + D+K   + K++K      +     G  H LVL+S G     +         S   +
Sbjct: 74  LATQDRKCIKLGKKMK------IHSMAQGAEHVLVLSSDGKPFEYNYSIEHAKFQSILQE 127

Query: 155 SNLVQ----DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL 210
             ++Q    D H+   +L+  GEL+ WG N +GQ+GI     +V  PQ VE L  +P+  
Sbjct: 128 KTIIQITCGDYHSL--ALSKGGELFAWGQNSHGQLGIGVMCPSVPTPQIVEHLAGVPLVQ 185

Query: 211 IACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG--PWIASPVAMTAGE 267
           I+ G  HS  LS S   +Y++G     QL    + +K +P LI          VA     
Sbjct: 186 ISAGEAHSMTLSMS-GNVYSWGKNDLGQLGLGHTENKDSPCLIEALDNQKVEFVACGGSH 244

Query: 268 DSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVLSDDFRVL--NPATQ------ILDVNF 319
            +L++  G L     +  G +  +      + +      VL  N  TQ      IL+ + 
Sbjct: 245 TALLTQDGQLFT---FGAGKYGQLGHKSKRNELKPRLVTVLVANRVTQIACGRTILNSDV 301

Query: 320 ERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFI 379
           E+ +  E+E+  +      +Q +LL+++                + + + +   K  +  
Sbjct: 302 EKSRTSEKELIMIAGG---NQSILLWMD----------------KKNSYVNLRRKIPTLN 342

Query: 380 KLSLINWFMKLHFSIFGQGFGCVCPTVLGDCVPKSW----LYLETVFLSPGCMNGSFLQV 435
           + ++  W                    + D   K W      +  +F S  C+ GSFL+ 
Sbjct: 343 ESTIKRW--------------------IADVGTKQWQNTKREIREIFTSSACLTGSFLR- 381

Query: 436 ENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAILASHAHLVKSLWNTPP 495
              +  +   K+  VD+ + ++ +  + +      +  ++N        +L+KSL    P
Sbjct: 382 ---QRKAAEPKSVHVDLNIARNAFKELTQ------KDWITNTITTCLRDNLLKSLPVHSP 432

Query: 496 DAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
             EAL +F  LP           E L +PFA A+
Sbjct: 433 HQEALEVFFLLPECPVMHACNNWESLVLPFADAV 466



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 46/214 (21%)

Query: 901  KVAYTAFYMPDLATVCDIRIDYFRWIS---GRPNGST------RDFLC----NYPFIFDA 947
            +V  T   +P+   V D  +D+  +     GR +G T       +  C    ++ F+F+ 
Sbjct: 529  RVNQTKCLVPEEVFVVDELLDWLNFYGEAYGRCSGKTNLETSAEEQRCVSFSDFSFVFNT 588

Query: 948  KAKTTLLEMDQRIQMEHAMNQTNFYL------------FLQTFNPHTLNQYLEVEVSRDN 995
              K  LL  D  ++++    + +  L            FL TFN         + V R +
Sbjct: 589  LTKIKLLYADSLLKIQEKRIRAHIRLARFVEGEELEPAFLPTFN---------LRVRRSH 639

Query: 996  IVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEI 1055
            ++ED + +L+++   D +K L V+            F GE      GV  EF   L +E+
Sbjct: 640  LIEDVLNQLSRFENEDLRKELWVS------------FTGEIGYGFRGVMTEFFYCLFEEM 687

Query: 1056 LDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              P+YGMF   EE   +WF      ++  YF  G
Sbjct: 688  TRPEYGMFMYPEEASFMWFPAKPKFEEKRYFFFG 721


>gi|156098949|ref|XP_001615489.1| hypothetical protein [Plasmodium vivax Sal-1]
 gi|148804363|gb|EDL45762.1| hypothetical protein, conserved [Plasmodium vivax]
          Length = 456

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 123/266 (46%), Gaps = 44/266 (16%)

Query: 14  GEVFTWGGDTHGQLG--LESADKKSQS---IPKRVKGLASVSVVQACAGYSHCLVLTSTT 68
           G +FT+G +  GQLG  +E  + +++S    P+ VK   +V     C GY H + +    
Sbjct: 120 GRIFTYGLNDKGQLGRSIEEENDQNKSYTLTPREVKTEGNVKFKDVCCGYKHTVAVDVNN 179

Query: 69  GLWHSLALNDCGEVFTWGGDT-HGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYS 125
            L+           + WGG+   G  GL   +K++ S PK+V+   S     V  C G  
Sbjct: 180 NLYS----------WGWGGNFFKGANGLGHGNKQNLSTPKKVESFKSDDSEFVNICCGDQ 229

Query: 126 HCLVLTSSG-VVTCTHKENGCGSDPSQGVQ-----------SNL----VQDSHTTITSLN 169
           H LVLT +G V  C   E G     + G Q           +N+    +   H+   +L+
Sbjct: 230 HSLVLTKNGKVYGCGRGEFGRLGKGNHGDQLFFEEIDFFISNNITVKGISCGHSFSAALS 289

Query: 170 SPGELYTWGNNEYGQMGINNS----NTTVTKPQRVE--SLVNLPIALIACGANHSFVLSK 223
           + GE+Y WG N+YGQ+GI NS     +    P +V+   + N+ I  IACG NH    S+
Sbjct: 290 TDGEVYVWGRNDYGQLGIENSIGDLYSHEVYPNKVKYFDMENIKIKFIACGDNHMIACSE 349

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTP 249
           +      F  GS   L+ PK++  +P
Sbjct: 350 NN---VIFFWGSRAWLE-PKAITLSP 371


>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
          Length = 451

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 97/231 (41%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV          
Sbjct: 165 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTVNQPIPRRVTGCLQNKVV---------- 212

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T   G    +A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L  + V +   
Sbjct: 213 -VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGL--GNSGNQPTPCRVAALQGIRVQRVAC 269

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT  G                                      ++Y WG N Y
Sbjct: 270 GYAHTLVLTDEG--------------------------------------QVYAWGANSY 291

Query: 183 GQMGINN-SNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 292 GQLGTGNKSNQSYPTPVTVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L    +  AC  Y           
Sbjct: 68  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGKKI--ACLSY----------- 110

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE++TWG+N Y Q+G   +N  + 
Sbjct: 111 ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNHGLV 146

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  +V++  P+ + G
Sbjct: 147 PCHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG 205


>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 1289

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 122/303 (40%), Gaps = 107/303 (35%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+ D GE++TWG    G+LG    D + +++P++V  L   SVV A  G +H  
Sbjct: 561 GAQHSLAITDAGELYTWGSGEDGRLG--HGDMRDRAVPRKVMSLLRESVVSASCGGAHTA 618

Query: 63  VLTSTTGL----------------------------------------WH-SLALNDCGE 81
           VLT+   +                                        W+ + AL+  G 
Sbjct: 619 VLTAKGSVFTFGRGRNGRLGLGDNKWRDTPHPIVGFPQGTSISLVVCGWNFTAALDRQGS 678

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPK---RVKGLASVSVVQACAGYSHCLVLTSSGVVTC 138
           VFTWG    GQ GL   D + Q +P+   +++ +A  SVV    GY+H +VLT+S     
Sbjct: 679 VFTWGKTGEGQCGLGYVD-RDQVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTAS----- 732

Query: 139 THKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQ 198
                                            GELY+WG  EYGQ+G  +    V +P 
Sbjct: 733 ---------------------------------GELYSWGLGEYGQLGTGD----VYQP- 754

Query: 199 RVESLVNLP---------IALIACGANHSFVLSKS-------VSRLYAFGIGSAVQLDSP 242
            + + V LP         +A + CGA HS   ++        ++   A G+G     D P
Sbjct: 755 -LPARVQLPADALCAPDQLARVYCGAFHSIATTEQRVMFAWGLNSYGACGLGHTANKDKP 813

Query: 243 KSV 245
           + +
Sbjct: 814 ERI 816


>gi|320162832|gb|EFW39731.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 591

 Score = 94.0 bits (232), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 135/343 (39%), Gaps = 80/343 (23%)

Query: 8   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTST 67
           L   D  +V+TWG  T G LG    D ++   P+ V+ L    +   C G  H + L  +
Sbjct: 153 LIREDASDVYTWGEGTRGMLGHGEEDPEAS--PRVVEALLGHDIKMLCLGSGHTMALAVS 210

Query: 68  TGLW----------------------------------------HSLALNDCGEVFTWGG 87
             ++                                        HS+A+ D GE + WG 
Sbjct: 211 GEVYSWGLGLGGRLGQGRERDRFTPLRLAGLRGFDITHIACNENHSVAVADNGEAYVWGR 270

Query: 88  DTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKENGCG 146
              G LG+E     S   P ++  L    VV A  G +  L +  SG V  C + E+G  
Sbjct: 271 GIDGSLGVEGDKHVS---PTQIHALDGKRVVHAACGAAFTLFVIESGEVYACGNNEHG-- 325

Query: 147 SDPSQGVQSNLVQDSHTTIT-----------------SLNSPGELYTWGNNEYGQMGINN 189
                G+ SN      T +T                 +L+  G LY WG +  GQ+G+  
Sbjct: 326 ---QLGIGSNEAMSEPTLVTNLPERIVRIACGNSHAVALSETGRLYAWGAHSSGQLGVGE 382

Query: 190 SNTTVTKPQRVES-LVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKSV-- 245
                  P RVES +V   +A  ACG NH+ +LS S   LYAFG G+  QL   P +   
Sbjct: 383 PLEDRLSPVRVESNVVRDDVADFACGGNHTIILSNS-GLLYAFGSGAQGQLGLGPLATKN 441

Query: 246 HKTPQLIHGPWIASPVAMTAGED--SLVSHSGGLVVKKIYSGG 286
             TP  +  P      A++ G+D  + VS  G     KIY+ G
Sbjct: 442 QATPAALPNPEGRKYTAISCGQDISAAVSDRG-----KIYTWG 479



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 34/223 (15%)

Query: 12  DCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLW 71
           + GEV+  G + HGQLG+ S +  S+  P  V  L    V  AC             G  
Sbjct: 312 ESGEVYACGNNEHGQLGIGSNEAMSE--PTLVTNLPERIVRIAC-------------GNS 356

Query: 72  HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYSHCLVL 130
           H++AL++ G ++ WG  + GQLG+    +   S P RV+  +    V     G +H ++L
Sbjct: 357 HAVALSETGRLYAWGAHSSGQLGVGEPLEDRLS-PVRVESNVVRDDVADFACGGNHTIIL 415

Query: 131 TSSGVV----TCTHKENGCG-------SDPS-----QGVQSNLVQDSHTTITSLNSPGEL 174
           ++SG++    +    + G G       + P+     +G +   +        +++  G++
Sbjct: 416 SNSGLLYAFGSGAQGQLGLGPLATKNQATPAALPNPEGRKYTAISCGQDISAAVSDRGKI 475

Query: 175 YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANH 217
           YTWG+     +G+ +  T    P  +ES+ +     +ACG  H
Sbjct: 476 YTWGSGASNALGLPDGRTKYA-PTLIESMADKRCRTVACGFFH 517


>gi|320593934|gb|EFX06337.1| ubiquitin-protein ligase [Grosmannia clavigera kw1407]
          Length = 1216

 Score = 94.0 bits (232), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 98/194 (50%), Gaps = 23/194 (11%)

Query: 899  GRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQ 958
            G+ +  + FYM  L   CD+  D+  W    P  +     C YPF+    AK  +LE + 
Sbjct: 764  GQLLPTSDFYM-TLLDNCDLVADFESWELKTPKFT----FCRYPFLLSIWAKIQILEHEA 818

Query: 959  RIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTN---DFKKP 1015
              QM     +     F         +Q+  + V RD +V+D++  +++   +   D KK 
Sbjct: 819  HRQMR---TKARDAFFDSIMTHRDFDQHFSLRVRRDCLVDDSLTAVSEAVGSGGEDLKKG 875

Query: 1016 LKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFS 1075
            L++             FRGEE  DAGG+R+E+ +LL++E+ +P +GMF   +++R  +F+
Sbjct: 876  LRI------------VFRGEEGIDAGGLRKEWFLLLVREVFNPDHGMFSYNDDSRYCYFN 923

Query: 1076 EDTFEDQNMYFLIG 1089
             ++FE  + +FL+G
Sbjct: 924  PNSFETSDQFFLVG 937



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 19/112 (16%)

Query: 720  YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL---- 774
            +G+  Y +++R  +F+ ++FE  +  FL+G + GLAIYN TI+++  P   ++K+L    
Sbjct: 908  HGMFSYNDDSRYCYFNPNSFETSDQFFLVGVVLGLAIYNSTILDIALPPFAFRKLLLAGP 967

Query: 775  -----------DEPI--LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                         PI   L DL +  P LAK LQ +LDY E D+E  F + F
Sbjct: 968  EAPAGMITGMTRPPISYTLADLAEYRPGLAKGLQQLLDY-EGDVESAFSLDF 1018


>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
           scrofa]
          Length = 568

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 104/247 (42%), Gaps = 60/247 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQ-ACAGYSH 60
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G L + +VV  AC     
Sbjct: 177 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKTVVNIAC----- 229

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                   G   S+A+ D GEV+ WG + +GQLGL S    +Q  P R+  L  + V + 
Sbjct: 230 --------GQMCSMAVVDTGEVYVWGYNGNGQLGLGSGG--NQPTPCRIAALQGIRVQRV 279

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
             GY+H LVLT                                        G++Y WG N
Sbjct: 280 ACGYAHTLVLTDE--------------------------------------GQVYAWGAN 301

Query: 181 EYGQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
            YGQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G      +
Sbjct: 302 SYGQLGTGNKSNQSYPTPVIVEK--DRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSV 359

Query: 240 DSPKSVH 246
             P   H
Sbjct: 360 TLPHLTH 366



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L+   +  AC  Y           
Sbjct: 80  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGKKI--ACLSY----------- 122

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P            H  + +  + GE++TWG+N Y Q+G   +N  + 
Sbjct: 123 ----------GSGP------------HVVLAT--TEGEVFTWGHNAYSQLGNGTTNHGLV 158

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  + ++  P+ + G
Sbjct: 159 PCHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG 217


>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
          Length = 4822

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE+++WG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3093 GSSHSAAITSSGELYSWGLGEYGRLG--HGDNATQLRPKLVKVLLGHRVIQVACGSRDA- 3149

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3150 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3198

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G G+D     P   +G++   +   H  + +L+  
Sbjct: 3199 GAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKI--VHVAVGALHCL 3256

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3257 AVTDTGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3309



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 104/237 (43%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   GE+FTWG   +G+LG    D + Q  PK V  L    V+    G    
Sbjct: 4086 AGGAHSACITASGELFTWGKGRYGRLG--HGDSEDQLKPKLVDALQGHRVIDVACG---- 4139

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     IP ++  L  + V +  
Sbjct: 4140 ------SGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSD--GCKIPMKIDSLTGLGVTKVE 4191

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4192 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4251

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    I  +ACG+ H+   S S
Sbjct: 4252 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKINRVACGSAHTLAWSTS 4307



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 35/268 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H LAL+  GEV++WG    G+LG    ++     P+ ++ L  V VV   AG +H 
Sbjct: 4034 SGGKHCLALSSEGEVYSWGEAEDGKLG--HGNRSPCDRPRVIESLRGVEVVDIAAGGAHS 4091

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-A 120
              +T++            GE+FTWG   +G+LG    D + Q  PK V  L    V+  A
Sbjct: 4092 ACITAS------------GELFTWGKGRYGRLG--HGDSEDQLKPKLVDALQGHRVIDVA 4137

Query: 121  C-AGYSHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQDSHTTI------------ 165
            C +G +  L LT   +V      +    G   S G +  +  DS T +            
Sbjct: 4138 CGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQFS 4197

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G +YTWG  +Y ++G + S+  V +P++V+ L    +  IA G+ H    ++  
Sbjct: 4198 VALTKSGAVYTWGKGDYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED- 4255

Query: 226  SRLYAFGIGSAVQL-DSPKSVHKTPQLI 252
              +Y +G     QL D   +  + P+L+
Sbjct: 4256 GEVYTWGDNDEGQLGDGTTNAIQRPRLV 4283



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3040 SGGRHAMALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3097

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE+++WG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3098 AAITSS------------GELYSWGLGEYGRLG--HGDNATQLRPKLVKVLLGHRVIQVA 3143

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3144 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3203

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + ++  V KPQ VE L    I  +A GA H   ++ + 
Sbjct: 3204 LALTKSGVVWTWGKGDYFRLG-HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDT- 3261

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3262 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3291



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 129/321 (40%), Gaps = 69/321 (21%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3933 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPTEALATLRPVQLIGGEQTLFAVT 3989

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 3990 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVY 4049

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
            +WG    G+LG    ++     P+ ++ L  V VV   AG +H   +T+SG +    K  
Sbjct: 4050 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGR 4107

Query: 144  ----GCGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMG 186
                G G    Q ++  LV     H  I      G+           +++WG+ +YG++G
Sbjct: 4108 YGRLGHGDSEDQ-LKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLG 4166

Query: 187  INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH 246
               S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H
Sbjct: 4167 RGGSDGCKI-PMKIDSLTGLGVTKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDH 4224

Query: 247  -KTPQLIHGPWIASPVAMTAG 266
             + P+ + G      +A+  G
Sbjct: 4225 VRRPRQVQGLQGKKVIAIATG 4245



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 32/223 (14%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
           GE++TWG   +G+LG  S++   Q+ P  V  L  + VV    G          +G   +
Sbjct: 556 GELYTWGRGNYGRLGHGSSE--DQTTPMLVTALKGLKVVDVACG----------SGDAQT 603

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
           LA+ + G+V++WG   +G+LG   +D      PK V+ L  + +V+ C G    + LT  
Sbjct: 604 LAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLVEKLQDLDIVKVCCGSQFSVALTKD 661

Query: 134 GVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSLNSPGELYTWGN 179
           G V    K +    G G+D            QG +   V    T   +L   GE+++WG+
Sbjct: 662 GQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGS 721

Query: 180 NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
           N+  Q     SN    +P+ +  L +  I  I+CG   SF  S
Sbjct: 722 NDKLQHFDTLSNK--KQPKALPGLKH--IVGISCGPGQSFAWS 760



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 106/252 (42%), Gaps = 59/252 (23%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGL----ASVSVVQACAGYSHC 61
           H LAL+  GEVF+WG    G+LG    D      P  +       A   VV    G ++ 
Sbjct: 492 HYLALSSNGEVFSWGCGDGGRLG--HGDATYLEEPTMIAAFNGKQAGKHVVHIACGSTYS 549

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
            V+T              GE++TWG   +G+LG  S++   Q+ P  V  L  + VV   
Sbjct: 550 AVITID------------GELYTWGRGNYGRLGHGSSE--DQTTPMLVTALKGLKVVDVA 595

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
                                  CGS            D+ T   + N  G++++WG+ +
Sbjct: 596 -----------------------CGSG-----------DAQTLAVTEN--GQVWSWGDGD 619

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           YG++G   S+   T P+ VE L +L I  + CG+  S  L+K   ++Y +G G   +L  
Sbjct: 620 YGKLGRGGSDGCKT-PKLVEKLQDLDIVKVCCGSQFSVALTKD-GQVYTWGKGDNQRLGH 677

Query: 242 PKSVH-KTPQLI 252
               H + P+L+
Sbjct: 678 GTDEHVRFPKLL 689



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 98/228 (42%), Gaps = 40/228 (17%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2946 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 2996

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+++  G  T+G+LGL      +  IP+++  L++  V  V   +G  H + LT 
Sbjct: 2997 -----GKIYACGEATNGRLGL-GLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTV 3050

Query: 133  SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN------------------SPGEL 174
             G V       G G D   G  S +  D    I +L                   S GEL
Sbjct: 3051 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3106

Query: 175  YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            Y+WG  EYG++G +  N T  +P+ V+ L+   +  +ACG+  +  L+
Sbjct: 3107 YSWGLGEYGRLG-HGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLA 3153



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG    D   +  P+ V+GL    +V    G  HCL
Sbjct: 3199 GAQFSLALTKSGVVWTWGKGDYFRLG-HGTDVHVRK-PQMVEGLRGKKIVHVAVGALHCL 3256

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3257 AVT------------DTGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3302

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3303 GSSHSVAWTTVDVTT 3317



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 27/147 (18%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S+AL   G V+TWG   + +LG  S D   +  P++V+GL    V+    G  HC+  T 
Sbjct: 4197 SVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQVQGLQGKKVIAIATGSLHCVCCTE 4254

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGY 124
                         GEV+TWG +  GQLG    D  + +I  P+ V  L    + +   G 
Sbjct: 4255 D------------GEVYTWGDNDEGQLG----DGTTNAIQRPRLVAALQGKKINRVACGS 4298

Query: 125  SHCLVLTSSGVVTCTHKENGCGSDPSQ 151
            +H L  ++S       K    G  P+Q
Sbjct: 4299 AHTLAWSTS-------KPTNAGKLPAQ 4318



 Score = 51.2 bits (121), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 39/184 (21%)

Query: 72  HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
           H LAL+  GEVF+WG    G+LG    D      P  +   A+ +  QA     H     
Sbjct: 492 HYLALSSNGEVFSWGCGDGGRLG--HGDATYLEEPTMI---AAFNGKQAGKHVVHI---- 542

Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
                        CGS             +++ + +++  GELYTWG   YG++G + S+
Sbjct: 543 ------------ACGS-------------TYSAVITID--GELYTWGRGNYGRLG-HGSS 574

Query: 192 TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTP 249
              T P  V +L  L +  +ACG+  +  L+ + + +++++G G   +L    S   KTP
Sbjct: 575 EDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP 634

Query: 250 QLIH 253
           +L+ 
Sbjct: 635 KLVE 638



 Score = 44.7 bits (104), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 17/119 (14%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           S+AL   G+V+TWG   + +LG      +    PK +  L    VV    G +HCL LT 
Sbjct: 655 SVALTKDGQVYTWGKGDNQRLG--HGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALT- 711

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                      D GEV +WG +   Q     ++KK    PK + GL  +  +    G S
Sbjct: 712 -----------DDGEVHSWGSNDKLQHFDTLSNKKQ---PKALPGLKHIVGISCGPGQS 756


>gi|119574647|gb|EAW54262.1| hect domain and RLD 4, isoform CRA_c [Homo sapiens]
          Length = 110

 Score = 93.6 bits (231), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 50/118 (42%), Positives = 72/118 (61%), Gaps = 18/118 (15%)

Query: 960  IQMEHAMNQTNFYL-FLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKV 1018
            I   H  N ++ +L  +++ NP      L + V R+NIV D +  L +    D+KKPLKV
Sbjct: 3    IDQAHRQNVSSLFLPVIESVNP-----CLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV 57

Query: 1019 NDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSE 1076
                         F GE+A DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+
Sbjct: 58   ------------IFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSD 103


>gi|52545532|emb|CAB46371.2| hypothetical protein [Homo sapiens]
          Length = 104

 Score = 93.6 bits (231), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 50/118 (42%), Positives = 72/118 (61%), Gaps = 18/118 (15%)

Query: 960  IQMEHAMNQTNFYL-FLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKV 1018
            I   H  N ++ +L  +++ NP      L + V R+NIV D +  L +    D+KKPLKV
Sbjct: 3    IDQAHRQNVSSLFLPVIESVNP-----CLILVVRRENIVGDAMEVLRKAKNIDYKKPLKV 57

Query: 1019 NDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSE 1076
                         F GE+A DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+
Sbjct: 58   ------------IFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSD 103


>gi|383852487|ref|XP_003701758.1| PREDICTED: ubiquitin-protein ligase E3A [Megachile rotundata]
          Length = 865

 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 135/313 (43%), Gaps = 52/313 (16%)

Query: 788  PTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFER-----LILIFKQCLIYLLQQ 842
            P++ ++LQ+++  +      V G +F   Y +   D          IL +   L   L +
Sbjct: 334  PSILQALQELITVK------VIGGSFTRDYCVQDADTITAPTKVMKILYYASMLAGELDE 387

Query: 843  PGVVDSTNGDITFNRKLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKV 902
            P +     G+ + N K      V    + L  E         G TV + R P       +
Sbjct: 388  PDLNIDEEGESSSNDKSGRSSSVPIPQDPLAKEL--------GITVLDARKPF------I 433

Query: 903  AYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQM 962
             +T FY   L+   ++  D+  + S  P   +     NY FI     KT  L  D RI+M
Sbjct: 434  PFTDFYNEPLSDAIEMDKDFAYYKSEEPMKFS---FMNYAFILTPATKTLGLYYDNRIRM 490

Query: 963  --EHAMNQTNFYLFLQTFNPH-TLNQYLEVEVSRDNIVEDTIRELAQYTTN---DFKKPL 1016
              E  M+      FLQT   H  ++ YL ++V RD +++D + EL         D KK L
Sbjct: 491  YSERRMS------FLQTIVGHFPISPYLRLKVRRDRLIDDALVELRMIAVEHPLDLKKQL 544

Query: 1017 KVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSE 1076
                         V+F GE+  D GGV +EF  L+++EI +P YGMF   E+T+  WF+ 
Sbjct: 545  ------------VVEFEGEQGVDEGGVSKEFFQLIVEEIFNPDYGMFITQEDTQMTWFNP 592

Query: 1077 DTFEDQNMYFLIG 1089
             +FE    + LIG
Sbjct: 593  TSFESDAHFTLIG 605



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 57/92 (61%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKD 785
           E+T+  WF+  +FE      LIG + GLAIYN  I+++ F + +Y+K+L       DL+D
Sbjct: 583 EDTQMTWFNPTSFESDAHFTLIGVVLGLAIYNNVILDVHFSMVVYRKLLGRKGCFADLED 642

Query: 786 LSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
            SPTL ++L++++DY   D+ + F  TFR  Y
Sbjct: 643 WSPTLYRTLKELMDYTGDDMPETFMQTFRVAY 674


>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Callithrix jacchus]
          Length = 577

 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 96/231 (41%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q  P+RV G     VV          
Sbjct: 186 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTVNQPTPRRVTGCLQNKVV---------- 233

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T   G    +A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L  + V +   
Sbjct: 234 -VTIACGQMCCMAVVDSGEVYVWGYNGNGQLGL--GNSGNQPTPCRVAALQGIRVQRVAC 290

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT  G                                      ++Y WG N Y
Sbjct: 291 GYAHTLVLTDEG--------------------------------------QVYAWGANSY 312

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 313 GQLGTGNKSNQSYPTPVTVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 361



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L+   +  AC  Y           
Sbjct: 89  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGKKI--ACLSY----------- 131

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE++TWG+N Y Q+G   +N  + 
Sbjct: 132 ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNHGLV 167

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  +V++ TP+ + G
Sbjct: 168 PCHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTG 226



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 92/234 (39%), Gaps = 63/234 (26%)

Query: 10  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTG 69
           +ND  E+F  G +  G LGL   D +S   P+R+  L+   +     G    +VL +T G
Sbjct: 89  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEG 144

Query: 70  LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHCL 128
                      EVFTWG + + QLG  +       +P  +   L++  V++   G  H L
Sbjct: 145 -----------EVFTWGHNAYSQLG--NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSL 191

Query: 129 VLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGIN 188
           VLTS G                                      E++ WG N  GQ+G  
Sbjct: 192 VLTSDG--------------------------------------EVFAWGYNNSGQVG-- 211

Query: 189 NSNTTVTK--PQRVES-LVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
            S +TV +  P+RV   L N  +  IACG      +  S   +Y +G     QL
Sbjct: 212 -SGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDS-GEVYVWGYNGNGQL 263


>gi|414870472|tpg|DAA49029.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 469

 Score = 93.6 bits (231), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 127/291 (43%), Gaps = 67/291 (23%)

Query: 3   GLWHSLALNDCGEVFTWG------------GDTHGQLGLESADKKS------QSIPKRVK 44
           G WH LA++D G  + WG            G+ +GQ G E   K+       + IP   +
Sbjct: 138 GGWHCLAVDDNGHAYAWGRGTRFPAFSVTGGNEYGQCGEEPERKEDGTRALRRDIPTPQR 197

Query: 45  GLASVSVVQACAGYSHCLVLTSTTGLW--------------------------------- 71
               + V Q  AG +H +VLT    +W                                 
Sbjct: 198 CAPKLKVRQVAAGGTHSVVLTQEGHVWTWGQPWPPGDIKQISTPVRVQGLEKVRVIAVGA 257

Query: 72  -HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 130
            H+LAL + G ++ WG + +GQLG  + D + +S P RV+GL+ +S+V   AG  H   L
Sbjct: 258 FHNLALTEDGILWAWGNNEYGQLG--TGDTQPRSHPIRVEGLSDLSLVDIAAGGWHSTAL 315

Query: 131 TSSGVVTC--THKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGIN 188
           T  G +     +    C  D    VQ  +++    T  ++    ++Y WG  E+G++G  
Sbjct: 316 TIQGEINSLPCYLFRACFKD----VQ--IIKYQKYTYYTM----KVYAWGRGEHGRLGFG 365

Query: 189 NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           +  ++   P +VE L    I  ++CG  HS  L++   R++++G G   +L
Sbjct: 366 DDKSSRMVPLKVELLAGEDIVQVSCGGTHSVALTRD-GRMFSYGRGDHGRL 415



 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 112/248 (45%), Gaps = 40/248 (16%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           + G  +SLA+ + G +FTWG +  G LG      K++S P  V  LA + +VQA      
Sbjct: 83  VAGSRNSLAICEDGRLFTWGWNQRGTLG-HPPKTKTESSPGPVHALAGLKIVQAA----- 136

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTW------------GGDTHGQLGLESADKKS------ 102
                   G WH LA++D G  + W            GG+ +GQ G E   K+       
Sbjct: 137 -------IGGWHCLAVDDNGHAYAWGRGTRFPAFSVTGGNEYGQCGEEPERKEDGTRALR 189

Query: 103 QSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCG-----SDP--SQGVQS 155
           + IP   +    + V Q  AG +H +VLT  G V    +    G     S P   QG++ 
Sbjct: 190 RDIPTPQRCAPKLKVRQVAAGGTHSVVLTQEGHVWTWGQPWPPGDIKQISTPVRVQGLEK 249

Query: 156 -NLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACG 214
             ++        +L   G L+ WGNNEYGQ+G  ++    + P RVE L +L +  IA G
Sbjct: 250 VRVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPR-SHPIRVEGLSDLSLVDIAAG 308

Query: 215 ANHSFVLS 222
             HS  L+
Sbjct: 309 GWHSTALT 316


>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
           CCMP2712]
          Length = 277

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 77/255 (30%), Positives = 117/255 (45%), Gaps = 45/255 (17%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS A+ + G+V+TWG    GQLG    D ++  +P+ + GL S  +V+   G +H +V++
Sbjct: 46  HSAAVTEQGQVYTWGSGKSGQLG--HGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVS 103

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                         G VF WG    GQLG+ S    +   P +V  L  V V +   G +
Sbjct: 104 KA------------GLVFAWGWGHFGQLGVGSTHNSND--PVQVTSLDGVKVCKVACGSA 149

Query: 126 HCLVLTSSGVVTC----THKENGCGSDPSQG------------VQSNLVQDSHTTITSLN 169
           H  V+T SG V       + + G G D SQ             V +     +HT + S  
Sbjct: 150 HTAVVTESGHVYTWGWGVNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVS-E 208

Query: 170 SPGELYTWGNNEYGQMG-----INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
               +++WG +EYGQ+G     I   N   + P+ ++ L       IACG++++  LS S
Sbjct: 209 VDRAVFSWGWDEYGQLGHGGWDIFGGNKNRS-PRPIKDLQQ-----IACGSSYTLALS-S 261

Query: 225 VSRLYAFGIGSAVQL 239
              +YAFG G   QL
Sbjct: 262 RGDVYAFGWGKDGQL 276



 Score = 93.2 bits (230), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 70/244 (28%), Positives = 116/244 (47%), Gaps = 41/244 (16%)

Query: 17  FTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           F+WG +  G LGL + D      P   ++GL  VSV  AC G S            HS A
Sbjct: 1   FSWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSV--ACGGGSE---------EQHSAA 49

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           + + G+V+TWG    GQLG    D ++  +P+ + GL S  +V+   G +H +V++ +G+
Sbjct: 50  VTEQGQVYTWGSGKSGQLG--HGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGL 107

Query: 136 -------------VTCTHKENGCGSDPSQGVQSNLVQ-------DSHTTITSLNSPGELY 175
                        V  TH  N    DP Q    + V+        +HT + +    G +Y
Sbjct: 108 VFAWGWGHFGQLGVGSTHNSN----DPVQVTSLDGVKVCKVACGSAHTAVVT--ESGHVY 161

Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
           TWG    GQ+G +  + + ++P  V+ L  + ++ +ACG  H+ V+S+    ++++G   
Sbjct: 162 TWGWGVNGQLG-HGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDE 220

Query: 236 AVQL 239
             QL
Sbjct: 221 YGQL 224



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/138 (34%), Positives = 66/138 (47%), Gaps = 23/138 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+  + + G V+TWG   +GQLG    D  SQS P  VK L  + V     G +H +
Sbjct: 147 GSAHTAVVTESGHVYTWGWGVNGQLG--HGDDASQSRPMYVKKLHGIYVSTLACGLAHTV 204

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD----KKSQSIPKRVKGLASVSVV 118
           V++                VF+WG D +GQLG    D     K++S P+ +K L  +   
Sbjct: 205 VVSEVD-----------RAVFSWGWDEYGQLGHGGWDIFGGNKNRS-PRPIKDLQQI--- 249

Query: 119 QACAGYSHCLVLTSSGVV 136
            AC G S+ L L+S G V
Sbjct: 250 -AC-GSSYTLALSSRGDV 265


>gi|398409414|ref|XP_003856172.1| hypothetical protein MYCGRDRAFT_52682 [Zymoseptoria tritici IPO323]
 gi|339476057|gb|EGP91148.1| hypothetical protein MYCGRDRAFT_52682 [Zymoseptoria tritici IPO323]
          Length = 1188

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 117/241 (48%), Gaps = 24/241 (9%)

Query: 852  DITFNRKLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPD 911
            D + + ++    +V+  L + NN     S   GG + S     A   G+ +  ++FY   
Sbjct: 670  DWSNDWQIKAAAKVMSLLFAANN-IWQGSPRDGGHSSSIPHAKARRSGQLLPTSSFYN-T 727

Query: 912  LATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF 971
            L    D+  D+  W + R     +   C YP      AK  +LE D R QME    +   
Sbjct: 728  LLDYQDLIADFKIWETRR----DKFAFCQYPLFLSMGAKIKILEHDARRQMEIKAREA-- 781

Query: 972  YLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYT---TNDFKKPLKVNDTSPIYLAP 1028
              F Q      ++ +  + V R+ +V+D++R+++        + KK L+V          
Sbjct: 782  -YFDQVIRQRAIDGHFTLRVRRECMVDDSLRQISAAVGAGQEELKKGLRV---------- 830

Query: 1029 QVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLI 1088
              +F GEE  DAGG R+E+ ++L+++I DP +GMF   E++++ +F+ ++FE  + Y+L+
Sbjct: 831  --QFSGEEGVDAGGPRKEWFLMLVRDIFDPNHGMFVYDEDSQTCYFNANSFETSDQYYLV 888

Query: 1089 G 1089
            G
Sbjct: 889  G 889



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 22/117 (18%)

Query: 718 NHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
           NH      E++++ +F+ ++FE  +  +L+G L GLAIYN TI+++  P   ++K+L   
Sbjct: 859 NHGMFVYDEDSQTCYFNANSFETSDQYYLVGALLGLAIYNSTILDISLPSFAFRKLLAAA 918

Query: 778 ---------------------ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                                  L DL +  P+LA  LQ +LD+ + D+E  +   F
Sbjct: 919 PTSSNPSSNITSLTGTKNQMTYTLSDLAEFRPSLASGLQQLLDF-DGDVEATYCRDF 974


>gi|198430115|ref|XP_002128407.1| PREDICTED: similar to ubiquitin protein ligase E3A [Ciona
            intestinalis]
          Length = 1066

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 18/190 (9%)

Query: 902  VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQ 961
            V  T F    L  V  I  DY  +   +   +   FL +YPF+    +KTT L  D R++
Sbjct: 630  VPQTEFVNEALNDVIKIDKDYANYRISQQGTNKYSFL-HYPFLLTTLSKTTYLFYDNRVR 688

Query: 962  MEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTN--DFKKPLKVN 1019
            M     +T   L    F+   +N +L+++V R +I+ DT+ +L   T N  + +K L   
Sbjct: 689  MYSERRRT---LMSSLFSGSAINPFLKIQVRRAHIINDTLVQLEMATENLKNLRKQL--- 742

Query: 1020 DTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTF 1079
                      V+F GEE  D GGV +EF  L+++EI +P  G F   EE++  WF+ ++F
Sbjct: 743  ---------YVEFDGEEGADEGGVSKEFFALMVEEIFNPANGTFILVEESQLFWFNPESF 793

Query: 1080 EDQNMYFLIG 1089
            E Q  Y LIG
Sbjct: 794  EGQMQYKLIG 803



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 1/92 (1%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKD 785
           EE++  WF+ ++FE Q    LIG + GLAIYN  I+++ FP  LYKK+L      +D+KD
Sbjct: 781 EESQLFWFNPESFEGQMQYKLIGIILGLAIYNNCILDIKFPAFLYKKLLGRRAKFRDIKD 840

Query: 786 LSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
           + P + +SL DIL Y   ++E    +TFR  Y
Sbjct: 841 IYPVVYRSLCDILSY-SGNVEQDMMLTFRVEY 871


>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Callithrix jacchus]
          Length = 556

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 96/231 (41%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q  P+RV G     VV          
Sbjct: 165 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTVNQPTPRRVTGCLQNKVV---------- 212

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T   G    +A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L  + V +   
Sbjct: 213 -VTIACGQMCCMAVVDSGEVYVWGYNGNGQLGL--GNSGNQPTPCRVAALQGIRVQRVAC 269

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT  G                                      ++Y WG N Y
Sbjct: 270 GYAHTLVLTDEG--------------------------------------QVYAWGANSY 291

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 292 GQLGTGNKSNQSYPTPVTVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L+   +  AC  Y           
Sbjct: 68  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGKKI--ACLSY----------- 110

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE++TWG+N Y Q+G   +N  + 
Sbjct: 111 ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNHGLV 146

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  +V++ TP+ + G
Sbjct: 147 PCHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTG 205



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 92/234 (39%), Gaps = 63/234 (26%)

Query: 10  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTG 69
           +ND  E+F  G +  G LGL   D +S   P+R+  L+   +     G    +VL +T G
Sbjct: 68  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEG 123

Query: 70  LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHCL 128
                      EVFTWG + + QLG  +       +P  +   L++  V++   G  H L
Sbjct: 124 -----------EVFTWGHNAYSQLG--NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSL 170

Query: 129 VLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGIN 188
           VLTS G                                      E++ WG N  GQ+G  
Sbjct: 171 VLTSDG--------------------------------------EVFAWGYNNSGQVG-- 190

Query: 189 NSNTTVTK--PQRVES-LVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
            S +TV +  P+RV   L N  +  IACG      +  S   +Y +G     QL
Sbjct: 191 -SGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDS-GEVYVWGYNGNGQL 242


>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
           [Acyrthosiphon pisum]
          Length = 4257

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 121/263 (46%), Gaps = 46/263 (17%)

Query: 14  GEVFTWGGDT---HGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGL 70
            EVF WG ++   H +   E  D     IP+ V+ L+ V  V+A     +C  +  T G 
Sbjct: 342 SEVFMWGSNSSNQHAEGATEVTD-----IPRLVRSLSDVQQVEAG---QYCTFIIDTKG- 392

Query: 71  WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK---GLASVSVVQACAGYSHC 127
                ++ CG+      +++G+LGL   +  +Q +PKR+     +  VS  + C G  H 
Sbjct: 393 ----CVSACGK------NSYGRLGL--GNSSNQPVPKRININCKIKQVSSSKGCDG--HS 438

Query: 128 LVLTSSGVV---------------TCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPG 172
           L L+ +G V                 THKE      P  G    LV   +    ++ S G
Sbjct: 439 LALSDTGEVYSWGDGDYGKLGHGDVATHKEPKLIQGPFIGKVIELVSAGYRHSAAVTSDG 498

Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           +LYTWG  ++G++G  + N     P  V+SL ++P+  +ACG+ H+   S+  + +++FG
Sbjct: 499 QLYTWGEGDHGRLGHGDCNPRFI-PTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFG 557

Query: 233 IGSAVQLDSPKSVH-KTPQLIHG 254
            G   +L    ++    PQ I G
Sbjct: 558 SGDNGKLGHGNTIRLYKPQKIEG 580



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 151/357 (42%), Gaps = 61/357 (17%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHCLVL 64
           HSLAL+D GEV++WG   +G+LG    D  +   PK ++G     V++   AGY H   +
Sbjct: 437 HSLALSDTGEVYSWGDGDYGKLG--HGDVATHKEPKLIQGPFIGKVIELVSAGYRHSAAV 494

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
           TS             G+++TWG   HG+LG    D   + IP  VK L+ + V     G 
Sbjct: 495 TSD------------GQLYTWGEGDHGRLG--HGDCNPRFIPTLVKSLSDMPVGYVACGS 540

Query: 125 SHCLVLTSSGVVTCTHKENGCGS------------DPSQGVQSNLVQDSHTTI---TSLN 169
           +H L  +  G    +      G                +G++   ++     I    +L 
Sbjct: 541 THTLACSRDGNTVWSFGSGDNGKLGHGNTIRLYKPQKIEGLRHYKIKKVAAGIHFSVALT 600

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             GE++TWG  +   +G  +S  T+  P  VE L+   I  I+ G +H   L+++ + +Y
Sbjct: 601 CTGEVFTWG--QGSNLGCGSSEITLFSPAVVEDLMQQMIIDISVGDSHCLALTRNCA-VY 657

Query: 230 AFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHS 289
           A+G     Q     S              SPV+      S V +  G  + +I +G  HS
Sbjct: 658 AWGSNGKGQCGQGHS-------------TSPVS----RPSKVINLEGKQINQISAGTSHS 700

Query: 290 IVTVTKSSD---GVLSDDFRVLNPATQILDVNFERLKE-CEREVEQLKSDETLDQDL 342
           +   T   D    V    F +      + +  F+ L++  E+  EQ++S E+   D+
Sbjct: 701 VAWTTLPPDRQTNVWHSPFCI-----DLHESTFKWLRQFIEKYCEQIESHESTPNDI 752



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 111/233 (47%), Gaps = 34/233 (14%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+   G+++TWG   HG+LG    D   + IP  VK L+ + V     GY  C
Sbjct: 486 AGYRHSAAVTSDGQLYTWGEGDHGRLG--HGDCNPRFIPTLVKSLSDMPV-----GYVAC 538

Query: 62  LVLTSTTGLWHSLALN-DCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                  G  H+LA + D   V+++G   +G+LG  +  +  +  P++++GL    + + 
Sbjct: 539 -------GSTHTLACSRDGNTVWSFGSGDNGKLGHGNTIRLYK--PQKIEGLRHYKIKKV 589

Query: 121 CAGYSHCLVLTSSG-VVTCTHKEN-GCGSDP----SQGVQSNLVQ---------DSHTTI 165
            AG    + LT +G V T     N GCGS      S  V  +L+Q         DSH   
Sbjct: 590 AAGIHFSVALTCTGEVFTWGQGSNLGCGSSEITLFSPAVVEDLMQQMIIDISVGDSHCLA 649

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
            + N    +Y WG+N  GQ G  +S + V++P +V +L    I  I+ G +HS
Sbjct: 650 LTRNCA--VYAWGSNGKGQCGQGHSTSPVSRPSKVINLEGKQINQISAGTSHS 700



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 52/246 (21%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            +  L   G V + G   +G+LG   +D            L +++++ A  G+    V TS
Sbjct: 3438 TFVLTSQGTVLSCGEGNYGRLGHGHSD-----------SLPNLTMISALQGFVITQVSTS 3486

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
                 HSLAL + GEVF+WG    G+LG    + + Q  PK ++ L  V V+Q   G+ H
Sbjct: 3487 IGSDGHSLALTETGEVFSWGDGDFGKLG--HGNNERQRKPKLIESLYDVVVIQVACGHKH 3544

Query: 127  CLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG 186
              VL+                           QD           GE+Y +G+ E+G++G
Sbjct: 3545 SAVLS---------------------------QD-----------GEVYVFGSAEHGKLG 3566

Query: 187  INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH 246
            +   +    +P ++     L I  IACG NH+  + ++V   +  G G  + + S K ++
Sbjct: 3567 LG-GHINKKRPTKIVHKGFLNIKYIACGQNHTICIGENVVWAFGEGEGGKLGIGSKKDIY 3625

Query: 247  KTPQLI 252
               ++I
Sbjct: 3626 VPQEII 3631



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 104/240 (43%), Gaps = 31/240 (12%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HSLAL + GEVF+WG    G+LG    + + Q  PK ++ L  V V+Q   G+ H  VL+
Sbjct: 3492 HSLALTETGEVFSWGDGDFGKLG--HGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLS 3549

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                          GEV+ +G   HG+LGL     K +      KG  ++  + AC G +
Sbjct: 3550 QD------------GEVYVFGSAEHGKLGLGGHINKKRPTKIVHKGFLNIKYI-AC-GQN 3595

Query: 126  HCLVLTSSGVVTCTHKEN---GCGSDPSQGVQSNLVQDSHTTITS----------LNSPG 172
            H + +  + V      E    G GS     V   ++  +   I            L+  G
Sbjct: 3596 HTICIGENVVWAFGEGEGGKLGIGSKKDIYVPQEIITLNGKNIKKAYCGNGFTMFLSEDG 3655

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
            ELY+ G++   Q   +   T    P+++       +  +A G +H  VL+ +   ++A+G
Sbjct: 3656 ELYSCGSDNL-QDATDVLYTEKLIPEKIFEFQGQIVTDVATGPDHVLVLT-ARGHVWAWG 3713



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 84/219 (38%), Gaps = 62/219 (28%)

Query: 80  GEVFTWGGDT---HGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV 136
            EVF WG ++   H +   E  D     IP+ V+ L+ V  V+A   Y   ++ T   V 
Sbjct: 342 SEVFMWGSNSSNQHAEGATEVTD-----IPRLVRSLSDVQQVEA-GQYCTFIIDTKGCVS 395

Query: 137 TCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTK 196
            C                                       G N YG++G+ NS+     
Sbjct: 396 AC---------------------------------------GKNSYGRLGLGNSSNQPV- 415

Query: 197 PQRVESLVNLPIALIACGAN---HSFVLSKSVSRLYAFGIGSAVQLDSPK-SVHKTPQLI 252
           P+R+   +N  I  ++       HS  LS +   +Y++G G   +L     + HK P+LI
Sbjct: 416 PKRIN--INCKIKQVSSSKGCDGHSLALSDT-GEVYSWGDGDYGKLGHGDVATHKEPKLI 472

Query: 253 HGPWIASPVAMTAG---EDSLVSHSGGLVVKKIYSGGDH 288
            GP+I   + + +      + V+  G L     +  GDH
Sbjct: 473 QGPFIGKVIELVSAGYRHSAAVTSDGQLYT---WGEGDH 508


>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
            carolinensis]
          Length = 4839

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 109/232 (46%), Gaps = 33/232 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE+++WG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3111 GSSHSAAITSSGELYSWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3167

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3168 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3216

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G G+D     P   +G++   +   H  + +L+  
Sbjct: 3217 GAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKI--IHVAVGALHCL 3274

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS
Sbjct: 3275 AVTDTGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3325



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 106/237 (44%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG    D + Q  PK V+ L    V+    G    
Sbjct: 4103 AGGAHSACITAAGDLYTWGKGRYGRLG--HGDSEDQLKPKLVEALQGYRVIDIACG---- 4156

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  V VV+  
Sbjct: 4157 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGVGVVKVE 4208

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4209 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    I  +ACG+ H+   S S
Sbjct: 4269 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKINRVACGSAHTLAWSTS 4324



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 116/251 (46%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEVF+WG    G+LG         ++P +  K ++++S  QA     H    
Sbjct: 507 HYLALAATGEVFSWGCGDGGRLG------HGDTVPLEEPKMISALSGKQAGKHVVHI--- 557

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   Q+IP  V GL  + V+      
Sbjct: 558 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DQTIPMLVTGLKGLKVIDVS--- 610

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 611 --------------------CGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 637

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L I  ++CG+  S  L+K   ++Y++G G   +L     
Sbjct: 638 LGRGGSDGCKT-PKLIEKLQDLDIVKVSCGSQFSVALTKD-GQVYSWGKGDNQRLGHGTE 695

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 696 EHVRYPKLLEG 706



 Score = 80.5 bits (197), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3058 SGGRHAMALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3115

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE+++WG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3116 AAITSS------------GELYSWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3161

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3162 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3221

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + ++  V KPQ VE L    I  +A GA H   ++ + 
Sbjct: 3222 LALTKSGVVWTWGKGDYFRLG-HGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDT- 3279

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3280 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3309



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   Q+IP  V GL  + V+    G     
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DQTIPMLVTGLKGLKVIDVSCG----- 612

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + +V+   
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDIVKVSC 665

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 666 GSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLAL 725

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+Y+WG+N+  Q   +    T   P  +  L +  I  IACG   SF  S
Sbjct: 726 TEDSEVYSWGSNDQCQH-FDTLRITKPDPTALPGLDSKHIVGIACGPAQSFAWS 778



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 34/259 (13%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  IP+++  L++  VV+  A +S         G  H+
Sbjct: 3015 GKVYACGEATNGRLGL-GLSSGTVPIPRQITALSNY-VVKKVAVHS---------GGRHA 3063

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   +TSS
Sbjct: 3064 MALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3121

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
            G +       +   G G + +Q ++  +V+    H  I            +L   G +++
Sbjct: 3122 GELYSWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3180

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G  
Sbjct: 3181 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3238

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             +L     VH + PQ++ G
Sbjct: 3239 FRLGHGTDVHVRKPQVVEG 3257



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 130/323 (40%), Gaps = 73/323 (22%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4006

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4007 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4066

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G +    K  
Sbjct: 4067 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGR 4124

Query: 144  ----GCGSDPSQGVQSNLVQ---------------DSHTTITSLNSPGELYTWGNNEYGQ 184
                G G    Q ++  LV+               D+ T    L     +++WG+ +YG+
Sbjct: 4125 YGRLGHGDSEDQ-LKPKLVEALQGYRVIDIACGSGDAQTLC--LTDDDTVWSWGDGDYGK 4181

Query: 185  MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
            +G   S+     P +++SL  + +  + CG+  S  L+KS + +Y +G G   +L     
Sbjct: 4182 LGRGGSDGCKV-PMKIDSLTGVGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSD 4239

Query: 245  VH-KTPQLIHGPWIASPVAMTAG 266
             H + P+ + G      +A+  G
Sbjct: 4240 DHVRRPRQVQGLQGKKVIAIATG 4262



 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 99/228 (43%), Gaps = 40/228 (17%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3014

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L++  V  V   +G  H + LT 
Sbjct: 3015 -----GKVYACGEATNGRLGL-GLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTV 3068

Query: 133  SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN------------------SPGEL 174
             G V       G G D   G  S +  D    I +L                   S GEL
Sbjct: 3069 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3124

Query: 175  YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            Y+WG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3125 YSWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG    D   +  P+ V+GL    ++    G  HCL
Sbjct: 3217 GAQFSLALTKSGVVWTWGKGDYFRLG-HGTDVHVRK-PQVVEGLRGKKIIHVAVGALHCL 3274

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3275 AVT------------DTGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3320

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3321 GSSHSVSWTTMDVAT 3335



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+ LAS ++V+          + + +   H LAL   GEVF+WG    G+LG     
Sbjct: 485 PQLVQSLASRNIVK----------IAAHSDGHHYLALAATGEVFSWGCGDGGRLG----- 529

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K ++++S  QA     H                  CGS           
Sbjct: 530 -HGDTVPLEEPKMISALSGKQAGKHVVHI----------------ACGS----------- 561

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G + S+   T P  V  L  L +  ++CG+  +
Sbjct: 562 ----TYSAAITAEGELYTWGRGNYGRLG-HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDA 616

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 653


>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
          Length = 892

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 106/246 (43%), Gaps = 59/246 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYSH 60
           G  H++AL   G+V+TWG ++ GQLGL    KK  SI  P+ V+ L+ + +VQ  AG   
Sbjct: 125 GSRHTVALTKEGQVYTWGQNSRGQLGL---GKKGCSISSPQCVRSLSGMPLVQVSAGGD- 180

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                      HS AL+  G VF WG +  GQLGL   D + +  P  V  L        
Sbjct: 181 -----------HSFALSVSGSVFGWGRNDCGQLGL--GDSQDRCTPTSVDSLNLKKTTSI 227

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
             G  H  +LT  G V                                      +T+G+ 
Sbjct: 228 SCGKDHTAILTKHGTV--------------------------------------FTFGSG 249

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           ++GQ+G N+S   + +P+ V  L    +  IACG  H+ VL ++ +++Y+FG     QL 
Sbjct: 250 QFGQLGHNSSRNEL-RPRLVAELWGAKVTRIACGRYHTLVLQEN-NKIYSFGCNDQNQLG 307

Query: 241 SPKSVH 246
                H
Sbjct: 308 RSNDSH 313



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 140/342 (40%), Gaps = 92/342 (26%)

Query: 39  IPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESA 98
           +P+ ++    + V Q   G  H + LT              G+V+TWG ++ GQLGL   
Sbjct: 107 LPRMLEAFCRIPVSQVACGSRHTVALTKE------------GQVYTWGQNSRGQLGL--- 151

Query: 99  DKKSQSI--PKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN 156
            KK  SI  P+ V+ L+ + +VQ  AG  H   L+ SG V                    
Sbjct: 152 GKKGCSISSPQCVRSLSGMPLVQVSAGGDHSFALSVSGSV-------------------- 191

Query: 157 LVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN 216
                             + WG N+ GQ+G+ +S    T P  V+SL       I+CG +
Sbjct: 192 ------------------FGWGRNDCGQLGLGDSQDRCT-PTSVDSLNLKKTTSISCGKD 232

Query: 217 HSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHGPWIASPVAMTAGE-DSLVSHS 274
           H+ +L+K  + ++ FG G   QL    S ++  P+L+   W A    +  G   +LV   
Sbjct: 233 HTAILTKHGT-VFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQE 291

Query: 275 GGLVVKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKS 334
                 KIYS G +    + +S+D   S    VL P          ++ +C         
Sbjct: 292 NN----KIYSFGCNDQNQLGRSNDSHPSVPLPVLLP----------QVYKCS-------- 329

Query: 335 DETLDQDLLLY--LETVFLSPGCMNGSFLQVENDEHFSCNSK 374
                   LLY  ++  F S  C+N SFL+ + D++F  + K
Sbjct: 330 --------LLYREIQRTFSSASCLNRSFLE-KKDKYFQTSPK 362



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 78/135 (57%), Gaps = 12/135 (8%)

Query: 687 ASLILFTAMRNSSVDVFPDFPIV-AAYPKN---GINH------YGITEYEETRSI-WFSE 735
           A +++F  M +++  +F D P+    Y K+    + H      YG+  + +++++ WF  
Sbjct: 561 AKMLIFQKMCDATKVIFDDNPVFDEVYIKDFFYEVFHEIVSPEYGMFMFNDSKTLAWFPS 620

Query: 736 DTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQ 795
              ++    FL G LCGLA+YN  II +PFPL L+KK+L     L+DL++ SP+  K+L 
Sbjct: 621 KAQQEDQRFFLFGVLCGLALYNQVIIFLPFPLVLFKKLLGVTPSLEDLREFSPSEYKTLH 680

Query: 796 DIL-DYREPDLEDVF 809
            IL +Y +  LE++F
Sbjct: 681 CILYEYTDDVLENLF 695


>gi|67516325|ref|XP_658048.1| hypothetical protein AN0444.2 [Aspergillus nidulans FGSC A4]
 gi|40747387|gb|EAA66543.1| hypothetical protein AN0444.2 [Aspergillus nidulans FGSC A4]
          Length = 1165

 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 22/201 (10%)

Query: 892  RTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKT 951
            R    H G  +  ++FY   L     +  D+  W S     +T+   C YPF     AK 
Sbjct: 707  RQQGAHRGHIIPISSFYNTRLDYSNLVVADFEAWESR----TTKFSFCQYPFFLSIGAKI 762

Query: 952  TLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQY---T 1008
             +LE D R QME    +  F   L       ++QY  + V R+ +VED+++ +++    +
Sbjct: 763  QILEHDARRQMEVKAREAFFSSILTR---KAVSQYFVLRVRRECLVEDSLQRVSEVLGSS 819

Query: 1009 TNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEE 1068
              + KK L++             F GEE  DAGG+R+E+ +LL++E+ DP +G+F   E+
Sbjct: 820  PEEMKKGLRIG------------FVGEEGVDAGGLRKEWFLLLVREVFDPHHGLFIYDED 867

Query: 1069 TRSIWFSEDTFEDQNMYFLIG 1089
            +R  +F+    E    +FL+G
Sbjct: 868  SRYCYFNPYCLESSEQFFLVG 888



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 18/112 (16%)

Query: 719 HYGITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL--- 774
           H+G+  Y+E +R  +F+    E     FL+G + GLAIYN  I+++  P   +KK+L   
Sbjct: 858 HHGLFIYDEDSRYCYFNPYCLESSEQFFLVGVVLGLAIYNSIILDIALPPFAFKKLLAGA 917

Query: 775 -----DEPIL--------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                 +P+         L+DL +  P LA+ L+ +L++ E D+ + F  TF
Sbjct: 918 PQTTGPQPLTTRPTYKCSLEDLAEYRPVLARGLRALLEF-EGDVAETFCHTF 968


>gi|259489309|tpe|CBF89472.1| TPA: ubiquitin-protein ligase (Hul4), putative (AFU_orthologue;
            AFUA_1G04640) [Aspergillus nidulans FGSC A4]
          Length = 1090

 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 22/201 (10%)

Query: 892  RTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKT 951
            R    H G  +  ++FY   L     +  D+  W S     +T+   C YPF     AK 
Sbjct: 640  RQQGAHRGHIIPISSFYNTRLDYSNLVVADFEAWESR----TTKFSFCQYPFFLSIGAKI 695

Query: 952  TLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQY---T 1008
             +LE D R QME    +  F   L       ++QY  + V R+ +VED+++ +++    +
Sbjct: 696  QILEHDARRQMEVKAREAFFSSILTR---KAVSQYFVLRVRRECLVEDSLQRVSEVLGSS 752

Query: 1009 TNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEE 1068
              + KK L++             F GEE  DAGG+R+E+ +LL++E+ DP +G+F   E+
Sbjct: 753  PEEMKKGLRIG------------FVGEEGVDAGGLRKEWFLLLVREVFDPHHGLFIYDED 800

Query: 1069 TRSIWFSEDTFEDQNMYFLIG 1089
            +R  +F+    E    +FL+G
Sbjct: 801  SRYCYFNPYCLESSEQFFLVG 821



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 10/104 (9%)

Query: 719 HYGITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL--- 774
           H+G+  Y+E +R  +F+    E     FL+G + GLAIYN  I+++  P   +KK+L   
Sbjct: 791 HHGLFIYDEDSRYCYFNPYCLESSEQFFLVGVVLGLAIYNSIILDIALPPFAFKKLLAGA 850

Query: 775 -----DEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                 +P+  QDL +  P LA+ L+ +L++ E D+ + F  TF
Sbjct: 851 PQTTGPQPLTTQDLAEYRPVLARGLRALLEF-EGDVAETFCHTF 893


>gi|118383359|ref|XP_001024834.1| hypothetical protein TTHERM_00239090 [Tetrahymena thermophila]
 gi|89306601|gb|EAS04589.1| hypothetical protein TTHERM_00239090 [Tetrahymena thermophila SB210]
          Length = 789

 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 96/180 (53%), Gaps = 31/180 (17%)

Query: 921  DYFRWISGRPN--GSTRDF-LCNYPFIFDAKAKTTLLEM----DQRIQMEHAM----NQT 969
            +Y  W+ G+ N     R F  CNYPF  D K K  LLE+    DQR + E  +     Q 
Sbjct: 373  EYILWLKGKENQDKDQRFFTFCNYPFSMDIKFKYQLLEINSKFDQRNEHEKKIRSQIQQG 432

Query: 970  NFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQ 1029
             F +     N   L  +L  EVSRDNI++DTI+ ++Q   N FK P KV           
Sbjct: 433  QFII-----NSSQL--FLIFEVSRDNILDDTIQCISQPDLN-FKLPFKV----------- 473

Query: 1030 VKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             KFRGE+  D GGVR+E+  +++K++ +P +G+F E +  +  WF+ ++ +   +Y LIG
Sbjct: 474  -KFRGEQGIDEGGVRKEYYQIMIKQLFNPDFGLFLEKQNKQFFWFNSNSIDMPMLYDLIG 532



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 1/90 (1%)

Query: 724 EYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDL 783
           E +  +  WF+ ++ +   +  LIG+L G+AIYN   +++  P  +YKK++ +P+ L+D+
Sbjct: 508 EKQNKQFFWFNSNSIDMPMLYDLIGSLMGIAIYNQIQMDVRLPNVVYKKLIGDPVSLEDI 567

Query: 784 KDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           K          + IL+Y E DLE+   +TF
Sbjct: 568 KQFDAATYNGFKHILEY-EGDLENDLQLTF 596


>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
          Length = 4777

 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE+++WG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3069 GSSHSAAITSSGELYSWGLGEYGRLG--HGDNTTQLRPKLVKVLLGHRVIQVACGSRDA- 3125

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3126 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3174

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G G+D     P   +G++   +   H  + +L+  
Sbjct: 3175 GAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQIVEGLRGKKI--VHVAVGALHCL 3232

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3233 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3285



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 105/237 (44%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   GE+FTWG   +G+LG    D + Q  PK V  L    V+    G    
Sbjct: 4041 AGGAHSACITASGELFTWGKGRYGRLG--HGDSEDQLKPKLVDALQGHRVIDVACG---- 4094

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4095 ------SGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4146

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4147 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4206

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    I  +ACG+ H+   S S
Sbjct: 4207 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKINRVACGSAHTLAWSTS 4262



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 35/268 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H LAL+  GEV++WG    G+LG    ++     P+ ++ L  V VV   AG +H 
Sbjct: 3989 SGGKHCLALSSEGEVYSWGEAEDGKLG--HGNRSPCDRPRVIESLRGVEVVDIAAGGAHS 4046

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-A 120
              +T++            GE+FTWG   +G+LG    D + Q  PK V  L    V+  A
Sbjct: 4047 ACITAS------------GELFTWGKGRYGRLG--HGDSEDQLKPKLVDALQGHRVIDVA 4092

Query: 121  C-AGYSHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQDSHTTI------------ 165
            C +G +  L LT   +V      +    G   S G +  +  DS T +            
Sbjct: 4093 CGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 4152

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G +YTWG  +Y ++G + S+  V +P++V+ L    +  IA G+ H    ++  
Sbjct: 4153 VALTKSGAVYTWGKGDYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED- 4210

Query: 226  SRLYAFGIGSAVQL-DSPKSVHKTPQLI 252
              +Y +G     QL D   +  + P+L+
Sbjct: 4211 GEVYTWGDNDEGQLGDGTTNAIQRPRLV 4238



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3016 SGGRHAMALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3073

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE+++WG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3074 AAITSS------------GELYSWGLGEYGRLG--HGDNTTQLRPKLVKVLLGHRVIQVA 3119

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 3120 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3179

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + ++  V KPQ VE L    I  +A GA H   ++ S 
Sbjct: 3180 LALTKSGVVWTWGKGDYFRLG-HGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDS- 3237

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3238 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3267



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 129/321 (40%), Gaps = 69/321 (21%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3888 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPTEALATLRPVQLIGGEQTLFAVT 3944

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 3945 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4004

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
            +WG    G+LG    ++     P+ ++ L  V VV   AG +H   +T+SG +    K  
Sbjct: 4005 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGR 4062

Query: 144  ----GCGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMG 186
                G G    Q ++  LV     H  I      G+           +++WG+ +YG++G
Sbjct: 4063 YGRLGHGDSEDQ-LKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLG 4121

Query: 187  INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH 246
               S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H
Sbjct: 4122 RGGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDH 4179

Query: 247  -KTPQLIHGPWIASPVAMTAG 266
             + P+ + G      +A+  G
Sbjct: 4180 VRRPRQVQGLQGKKVIAIATG 4200



 Score = 70.5 bits (171), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 103/234 (44%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++    + P  V  L    VV    G     
Sbjct: 510 GSTYSAAVTADGELYTWGRGNYGRLGHGSSE--DVTTPMLVTALKGQKVVDVACG----- 562

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK V+ L  + +V+ C 
Sbjct: 563 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLVEKLQDLDIVKVCC 615

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSL 168
           G    + LT  G V    K +    G G+D            QG +   +    T   +L
Sbjct: 616 GSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLAL 675

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
              GE+++WG+N+  Q   +       +P+ +  L +  I  I+CG   SF  S
Sbjct: 676 TDEGEVHSWGSNDKLQH-FDTLFPNKKQPKALPGLNSKHIVGISCGPGQSFAWS 728



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 40/228 (17%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2922 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 2972

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+++  G  T+G+LGL  +    Q IP+++  L++  V  V   +G  H + LT 
Sbjct: 2973 -----GKIYACGEATNGRLGLGLSSGTIQ-IPRQISALSNYVVKKVAVHSGGRHAMALTV 3026

Query: 133  SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN------------------SPGEL 174
             G V       G G D   G  S +  D    I +L                   S GEL
Sbjct: 3027 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3082

Query: 175  YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            Y+WG  EYG++G +  NTT  +P+ V+ L+   +  +ACG+  +  L+
Sbjct: 3083 YSWGLGEYGRLG-HGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLA 3129



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 105/250 (42%), Gaps = 55/250 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESAD--KKSQSIPKRVKGLASVSVVQACAGYSHCLV 63
           H LAL+  GEV++WG    G+LG   A   ++   I           VVQ   G ++   
Sbjct: 457 HFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYSAA 516

Query: 64  LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG 123
           +T+             GE++TWG   +G+LG  S++    + P  V  L    VV     
Sbjct: 517 VTAD------------GELYTWGRGNYGRLGHGSSE--DVTTPMLVTALKGQKVVDVA-- 560

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
                                CGS            D+ T   + N  G++++WG+ +YG
Sbjct: 561 ---------------------CGSG-----------DAQTLAVTEN--GQVWSWGDGDYG 586

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPK 243
           ++G   S+   T P+ VE L +L I  + CG+  S  L+K   ++Y +G G   +L    
Sbjct: 587 KLGRGGSDGCKT-PKLVEKLQDLDIVKVCCGSQFSVALTKD-GQVYTWGKGDNQRLGHGT 644

Query: 244 SVH-KTPQLI 252
             H + P+L+
Sbjct: 645 DEHVRYPKLL 654



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 27/147 (18%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S+AL   G V+TWG   + +LG  S D   +  P++V+GL    V+    G  HC+  T 
Sbjct: 4152 SVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQVQGLQGKKVIAIATGSLHCVCCTE 4209

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGY 124
                         GEV+TWG +  GQLG    D  + +I  P+ V  L    + +   G 
Sbjct: 4210 D------------GEVYTWGDNDEGQLG----DGTTNAIQRPRLVAALQGKKINRVACGS 4253

Query: 125  SHCLVLTSSGVVTCTHKENGCGSDPSQ 151
            +H L  ++S       K    G  P+Q
Sbjct: 4254 AHTLAWSTS-------KPTNAGKMPAQ 4273



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG    D   +  P+ V+GL    +V    G  HCL
Sbjct: 3175 GAQFSLALTKSGVVWTWGKGDYFRLG-HGTDVHVRK-PQIVEGLRGKKIVHVAVGALHCL 3232

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3233 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3278

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3279 GSSHSVAWTTVDVTT 3293



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 51/223 (22%)

Query: 34  KKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQL 93
           K +   P  + GL+S  +V+          L +     H LAL+  GEV++WG    G+L
Sbjct: 429 KSTTLAPMLIHGLSSRKIVK----------LAAHPDGQHFLALSTSGEVYSWGCGDGGRL 478

Query: 94  GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHK-ENGCGSDPSQG 152
           G   A    +                        L+ T SG  T     +  CGS  S  
Sbjct: 479 GHGDATYLEEP----------------------ALITTFSGKQTGKQVVQIACGSTYSAA 516

Query: 153 VQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIA 212
           V ++               GELYTWG   YG++G + S+  VT P  V +L    +  +A
Sbjct: 517 VTAD---------------GELYTWGRGNYGRLG-HGSSEDVTTPMLVTALKGQKVVDVA 560

Query: 213 CGANHSFVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
           CG+  +  L+ + + +++++G G   +L    S   KTP+L+ 
Sbjct: 561 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVE 603


>gi|440798767|gb|ELR19832.1| HECT-domain (ubiquitin-transferase) domain containing protein
            [Acanthamoeba castellanii str. Neff]
          Length = 1097

 Score = 93.2 bits (230), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 91/177 (51%), Gaps = 37/177 (20%)

Query: 937  FLCNYPFIFDAKAKTTLLEMDQRIQM----EHAMNQTNFYLFLQT-----FNPHTLNQ-- 985
            F C+YPF+ D   K  ++ +D  +QM    E A+ + +F   L+      F P ++ +  
Sbjct: 679  FFCDYPFLLDPTTKARIMHIDAAMQMSYEVEDAIAKLSFLGMLKEQSLPLFIPASIQRTA 738

Query: 986  --YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGV 1043
              +L +E+ R  ++ DT+ +++     D KKPLKV            KF GEE  D GGV
Sbjct: 739  VPHLILEIRRQELIADTLAQVSA-KLRDLKKPLKV------------KFVGEEGIDQGGV 785

Query: 1044 RREFLMLLLKEILDPKYG-----------MFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            ++EF  L+++EI DPK+G           MF   EETR +WF+  + E +  Y LIG
Sbjct: 786  QKEFFQLIVEEIFDPKFGETVISSQLRPSMFSYDEETRRVWFNPFSLETEKQYQLIG 842



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/108 (41%), Positives = 66/108 (61%), Gaps = 4/108 (3%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKD 785
           EETR +WF+  + E +    LIG + GLAIYN  I+++  P+ +YKK+L       DLK+
Sbjct: 820 EETRRVWFNPFSLETEKQYQLIGMILGLAIYNGVILDLHLPVVVYKKLLGHTPTFADLKE 879

Query: 786 LSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFERLILIFK 833
           L P LAK +Q +LDY   D+EDVF +TF+  +    D + ER++   K
Sbjct: 880 LRPMLAKGIQQLLDYDGDDVEDVFCLTFQTEH----DTFGERVVYDLK 923


>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
            [Strongylocentrotus purpuratus]
          Length = 4064

 Score = 93.2 bits (230), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 108/232 (46%), Gaps = 33/232 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 2353 GSSHSAAVTSSGELYTWGLGEYGRLG--HGDSTTQLRPKLVKALVGKRVIQVACGSRDAQ 2410

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             LT          L D G V++WG    G+LG      +  S+P  V+ L    V+Q   
Sbjct: 2411 TLT----------LTDEGMVYSWGDGDFGKLG--RGGSEGCSVPHNVERLNGQGVIQIEC 2458

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDP-------SQGVQSNLVQDSHTTITSLN-- 169
            G    L LT +G V    K +    G G+D        ++G++   +   H  + +L+  
Sbjct: 2459 GAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHVRKPQVAEGLKGKKI--IHVAVGALHCL 2516

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
                 G+++ WG+N++GQ G + S T   KP  V+ L  + I  +ACG++HS
Sbjct: 2517 AVTDTGQVFAWGDNDHGQQG-DGSTTVNKKPALVQGLEGVRITRVACGSSHS 2567



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 108/236 (45%), Gaps = 29/236 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   GE++TWG   +G+LG    D + Q  PK    L    V+    G     
Sbjct: 3328 GGAHSACVTSSGELYTWGKGRYGRLG--HGDSEDQLRPKMADALKGYRVIDVACG----- 3380

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L ++D   V++WG   +G+LG   +D     +P++V  L+S+ V +   
Sbjct: 3381 -----SGDSQTLCISDDDNVWSWGDGDYGKLGRGGSD--GCKVPQKVDALSSIGVCKVEC 3433

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSL 168
            G    + LT SG V    K +    G GSD            QG +   +        + 
Sbjct: 3434 GSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKKIISIATGSLHCVAC 3493

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
            +  GE+YTWG+N+ GQ+G   +N  + +P+ V +L +  I  +ACG+ H+   S S
Sbjct: 3494 SDQGEVYTWGDNDEGQLGDGTTN-AIQRPRIVTALQDKKITNVACGSAHTVAWSTS 3548



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 124/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 2300 SGGRHAMALTVDGKVFSWGEGDDGKLGHLS--RMNCEKPRLLEALKTKRIRDIACGSSHS 2357

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 2358 AAVTSS------------GELYTWGLGEYGRLG--HGDSTTQLRPKLVKALVGKRVIQVA 2403

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      V  N+ + +   +          
Sbjct: 2404 CGSRDAQTLTLTDEGMVYSWGDGDFGKLGRGGSEGCSVPHNVERLNGQGVIQIECGAQFS 2463

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G+++TWG  +Y ++G + +++ V KPQ  E L    I  +A GA H   ++ + 
Sbjct: 2464 LALTKAGQVWTWGKGDYFRLG-HGTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVTDT- 2521

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             +++A+G      Q D   +V+K P L+ G
Sbjct: 2522 GQVFAWGDNDHGQQGDGSTTVNKKPALVQG 2551



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 54/222 (24%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL S+  ++  IPK+V GL S  VV+  A +S         G  H+
Sbjct: 2258 GKVYACGEGTNGRLGLGSS--QNVDIPKQVNGL-SQYVVKKVAVHS---------GGRHA 2305

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH   +TSS
Sbjct: 2306 MALTVDGKVFSWGEGDDGKLGHLS--RMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSS 2363

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            G                                      ELYTWG  EYG++G  +S TT
Sbjct: 2364 G--------------------------------------ELYTWGLGEYGRLGHGDS-TT 2384

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLS-KSVSRLYAFGIG 234
              +P+ V++LV   +  +ACG+  +  L+      +Y++G G
Sbjct: 2385 QLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDG 2426



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 97/236 (41%), Gaps = 43/236 (18%)

Query: 7    SLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQLG +E A  K   +P  ++ L S+  +Q   G      +T
Sbjct: 3174 TLSWGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTAIESLTSLRPIQIVGGEQTLFAVT 3230

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV--VQACAG 123
            +             G+++  G    G+LG+   D  S S P  ++ +  V +  V   +G
Sbjct: 3231 AD------------GKLYATGYGASGRLGIGGTD--SVSTPTLLESIQHVHIKKVAVNSG 3276

Query: 124  YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN-------------- 169
              H L L+  G V       G G D   G  +    D    I SL               
Sbjct: 3277 GKHALALSVEGEVYSW----GEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHS 3332

Query: 170  ----SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
                S GELYTWG   YG++G  +S   + +P+  ++L    +  +ACG+  S  L
Sbjct: 3333 ACVTSSGELYTWGKGRYGRLGHGDSEDQL-RPKMADALKGYRVIDVACGSGDSQTL 3387



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  H LA+ D G+VF WG + HGQ G  S     +  P  V+GL  V + +   G SH  
Sbjct: 2511 GALHCLAVTDTGQVFAWGDNDHGQQGDGSTTVNKK--PALVQGLEGVRITRVACGSSHST 2568

Query: 63   VLTST 67
               +T
Sbjct: 2569 AWATT 2573


>gi|225680676|gb|EEH18960.1| E3 ubiquitin-protein ligase HUWE1 [Paracoccidioides brasiliensis
            Pb03]
          Length = 799

 Score = 93.2 bits (230), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 24/252 (9%)

Query: 843  PGVVDSTNGDITFNR--KLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGR 900
            P   D+T   IT+++  ++    +V+  L   NN T +            +  P     R
Sbjct: 290  PKSPDATQQAITYSKDWQIRAAAKVMALLFCANNMTHSRKRDGARTGAEEVLRPDGQSSR 349

Query: 901  KVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRI 960
             +   + +   L    D+  D+  W S   NG      C Y F     AK  +LE D R 
Sbjct: 350  HLIPISTFYNTLLDYSDLIADFDAWESR--NGQFS--FCQYSFFLSIWAKIRILEHDARR 405

Query: 961  QMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYT---TNDFKKPLK 1017
            QME    +  F   L       ++QYL ++V R+ + ED++R +++       + KK L+
Sbjct: 406  QMEEKAREAFFNSILGR---RGVSQYLVLKVRRECLAEDSLRSVSEVVGTGQEEIKKGLR 462

Query: 1018 VNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSED 1077
            +            +F GEE  DAGG+R+E+ +LL++EI DP +G+F   E+++  +F+  
Sbjct: 463  I------------EFLGEEGVDAGGLRKEWFLLLVREIFDPLHGLFVYDEQSQYCYFNPF 510

Query: 1078 TFEDQNMYFLIG 1089
             FE    +FL+G
Sbjct: 511  CFESSEQFFLVG 522



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 21/124 (16%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL------DEPIL 779
           E+++  +F+   FE     FL+G L GLAIYN TI+++  P   ++K+L      + P L
Sbjct: 500 EQSQYCYFNPFCFESSEQFFLVGVLLGLAIYNSTILDIALPPFAFRKLLSCAPSNNVPAL 559

Query: 780 ----------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFERLI 829
                     LQDL +  P LA+ L+++L+Y + D+++ F + F    ++  D Y ++L 
Sbjct: 560 STPQQVFKCTLQDLAEYQPALARGLRNLLEY-DGDVQEAFCLDF----VIQVDRYGKKLE 614

Query: 830 LIFK 833
           L  +
Sbjct: 615 LPLR 618


>gi|378726890|gb|EHY53349.1| other hect domain ubiquitin protein ligase E3 [Exophiala dermatitidis
            NIH/UT8656]
          Length = 1206

 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 102/194 (52%), Gaps = 23/194 (11%)

Query: 899  GRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQ 958
            G+ +  ++FY   +    D+  D+  W + +    ++   C YPF     AK  +LE D 
Sbjct: 741  GQIIPISSFYN-TMLDYADLVADFETWETTK----SKFTFCQYPFFLSIYAKIHILEHDA 795

Query: 959  RIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTN---DFKKP 1015
            R QME    +  F   L       ++Q+L ++V RD +VED++R +++   +   D KK 
Sbjct: 796  RRQMEVKAREAFFDSILSR---KAVSQFLVLKVRRDCLVEDSLRSVSEVVGSGGSDIKKG 852

Query: 1016 LKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFS 1075
            L+++            F+GEE  DAGG+R+E+ +LL++EI DP +G+F   +++   +F+
Sbjct: 853  LRID------------FQGEEGIDAGGIRKEWFLLLVREIFDPNHGLFVYDDDSGYCYFN 900

Query: 1076 EDTFEDQNMYFLIG 1089
               FE    +FL+G
Sbjct: 901  PYCFESSEQFFLVG 914



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 17/94 (18%)

Query: 732 WFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP-------------- 777
           +F+   FE     FL+G L GLAIYN TI+++ FP  ++KK+L                 
Sbjct: 898 YFNPYCFESSEQFFLVGVLLGLAIYNSTILDVAFPPFVFKKLLASAPSTGDKLTSTPKVG 957

Query: 778 --ILLQDLKDLSPTLAKSLQDILDYREPDLEDVF 809
               L+DL +  P LA+  + +L++ E D+E+ F
Sbjct: 958 HGFTLEDLAEFRPALARGFKQLLEF-EGDVEETF 990


>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4628

 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE+++WG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 2878 GSSHSAAITSSGELYSWGLGEYGRLG--HGDNTTQLRPKLVKVLLGHRVIQVACGSRDA- 2934

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 2935 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 2983

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G G+D     P   +G++   +   H  + +L+  
Sbjct: 2984 GAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKI--VHVAVGALHCL 3041

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3042 AVTDTGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3094



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 107/254 (42%), Gaps = 46/254 (18%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   GE+FTWG   +G+LG    D + Q  PK V  L    V+    G    
Sbjct: 3903 AGGAHSACITASGELFTWGKGRYGRLG--HGDSEDQLKPKLVDALQGHRVIDVACG---- 3956

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D      P ++  L  + V++  
Sbjct: 3957 ------SGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSD--GCKTPMKIDSLTGLGVIKVE 4008

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLV------------ 158
             G    + LT SG V    K +    G GSD         QG+Q   V            
Sbjct: 4009 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4068

Query: 159  --QDSHTTITSLNSP------GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL 210
              +D    +     P      GE+YTWG+N+ GQ+G   +N  + +P+ V +L    I  
Sbjct: 4069 CTEDGRIKVFQWGLPRWSLGLGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKINR 4127

Query: 211  IACGANHSFVLSKS 224
            +ACG+ H+   S S
Sbjct: 4128 VACGSAHTLSWSTS 4141



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 116/268 (43%), Gaps = 59/268 (22%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H LAL+  GEV++WG    G+LG    ++     P+ ++ L  V VV   AG +H 
Sbjct: 3851 SGGKHCLALSSEGEVYSWGEAEDGKLG--HGNRSPCDRPRVIESLRGVEVVDIAAGGAHS 3908

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-A 120
              +T++            GE+FTWG   +G+LG    D + Q  PK V  L    V+  A
Sbjct: 3909 ACITAS------------GELFTWGKGRYGRLG--HGDSEDQLKPKLVDALQGHRVIDVA 3954

Query: 121  C-AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGN 179
            C +G +  L LT   +V                                      ++WG+
Sbjct: 3955 CGSGDAQTLCLTDDDMV--------------------------------------WSWGD 3976

Query: 180  NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
             +YG++G   S+   T P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L
Sbjct: 3977 GDYGKLGRGGSDGCKT-PMKIDSLTGLGVIKVECGSQFSVALTKSGA-VYTWGKGDYHRL 4034

Query: 240  DSPKSVH-KTPQLIHGPWIASPVAMTAG 266
                  H + P+ + G      +A+  G
Sbjct: 4035 GHGSDDHVRRPRQVQGLQGKKVIAIATG 4062



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 2825 SGGRHAMALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKAKRIRDIACGSSHS 2882

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE+++WG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 2883 AAITSS------------GELYSWGLGEYGRLG--HGDNTTQLRPKLVKVLLGHRVIQVA 2928

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 2929 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 2988

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + ++  V KPQ VE L    I  +A GA H   ++ + 
Sbjct: 2989 LALTKSGVVWTWGKGDYFRLG-HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDT- 3046

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3047 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3076



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   Q+ P  V  L  + VV    G     
Sbjct: 522 GSTYSAAITVDGELYTWGRGNYGRLGHGSSE--DQTTPMLVTALKGLKVVDVACG----- 574

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK V+ L  + +V+ C 
Sbjct: 575 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLVEKLQDLDIVKVCC 627

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSL 168
           G    + LT  G V    K +    G G+D            QG +   V    T   +L
Sbjct: 628 GSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLAL 687

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
              GE+++WG+N+  Q   +   +   +P+ +  L +  I  I+CG   SF  S
Sbjct: 688 TDDGEVHSWGSNDKLQH-FDTLFSNKKQPKALPGLNSKHIVGISCGPGQSFAWS 740



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 108/248 (43%), Gaps = 51/248 (20%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL+  GEVF+WG    G+LG    D      P  +   A+ +  QA     H     
Sbjct: 469 HYLALSSNGEVFSWGCGDGGRLG--HGDTTYLEEPTMI---AAFNGKQAGKHVVHI---- 519

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  +S A+   GE++TWG   +G+LG  S++   Q+ P  V  L  + VV       
Sbjct: 520 -ACGSTYSAAITVDGELYTWGRGNYGRLGHGSSE--DQTTPMLVTALKGLKVVDVA---- 572

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CGS            D+ T   + N  G++++WG+ +YG++
Sbjct: 573 -------------------CGSG-----------DAQTLAVTEN--GQVWSWGDGDYGKL 600

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
           G   S+   T P+ VE L +L I  + CG+  S  L+K   ++Y +G G   +L      
Sbjct: 601 GRGGSDGCKT-PKLVEKLQDLDIVKVCCGSQFSVALTKD-GQVYTWGKGDNQRLGHGTDE 658

Query: 246 H-KTPQLI 252
           H + P+L+
Sbjct: 659 HVRFPKLL 666



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 99/228 (43%), Gaps = 40/228 (17%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2731 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 2781

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+++  G  T+G+LGL      +  IP+++  L++  V  V   +G  H + LT 
Sbjct: 2782 -----GKIYACGEATNGRLGL-GLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTV 2835

Query: 133  SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN------------------SPGEL 174
             G V       G G D   G  S +  D    I +L                   S GEL
Sbjct: 2836 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGEL 2891

Query: 175  YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            Y+WG  EYG++G +  NTT  +P+ V+ L+   +  +ACG+  +  L+
Sbjct: 2892 YSWGLGEYGRLG-HGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLA 2938



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG    D   +  P+ V+GL    +V    G  HCL
Sbjct: 2984 GAQFSLALTKSGVVWTWGKGDYFRLG-HGTDVHVRK-PQMVEGLRGKKIVHVAVGALHCL 3041

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3042 AVT------------DTGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3087

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3088 GSSHSVAWTTVDVTT 3102



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 26/155 (16%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S+AL   G V+TWG   + +LG  S D   +  P++V+GL    V+    G  HC+  T 
Sbjct: 4014 SVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQVQGLQGKKVIAIATGSLHCVCCTE 4071

Query: 67   TTGL----WH----SLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVS 116
               +    W     SL L   GEV+TWG +  GQLG    D  + +I  P+ V  L    
Sbjct: 4072 DGRIKVFQWGLPRWSLGL---GEVYTWGDNDEGQLG----DGTTNAIQRPRLVAALQGKK 4124

Query: 117  VVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQ 151
            + +   G +H L  ++S       K    G  P+Q
Sbjct: 4125 INRVACGSAHTLSWSTS-------KPTNAGKLPAQ 4152



 Score = 50.8 bits (120), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 39/184 (21%)

Query: 72  HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
           H LAL+  GEVF+WG    G+LG    D      P  +   A+ +  QA     H     
Sbjct: 469 HYLALSSNGEVFSWGCGDGGRLG--HGDTTYLEEPTMI---AAFNGKQAGKHVVHI---- 519

Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
                        CGS               T   ++   GELYTWG   YG++G + S+
Sbjct: 520 ------------ACGS---------------TYSAAITVDGELYTWGRGNYGRLG-HGSS 551

Query: 192 TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTP 249
              T P  V +L  L +  +ACG+  +  L+ + + +++++G G   +L    S   KTP
Sbjct: 552 EDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP 611

Query: 250 QLIH 253
           +L+ 
Sbjct: 612 KLVE 615



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  H LA+ D G+V+ WG + HGQ G  +        P  V+GL    + +   G SH +
Sbjct: 3036 GALHCLAVTDTGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 3093

Query: 63   VLTS---TTGLWHSLALNDCGEVFTWGGDTHGQ--LGLESADKKSQSIPKRVKGLASV 115
              T+   TT   H   L      F    D+ G   LG++S D  S ++  ++ G +S 
Sbjct: 3094 AWTTVDVTTPSVHEPVL------FQTARDSLGASYLGVQS-DSDSSAVNNKMSGQSST 3144


>gi|334183781|ref|NP_177129.2| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|332196844|gb|AEE34965.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1041

 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 48/267 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQ-ACAGYSH 60
           G +H+ A+   G++++WG  TH    L   ++ S  IPKRV G L  + V   AC     
Sbjct: 360 GDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVAC----- 414

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                   G WH+  +   G++FT+G  T G LG    D++S S+P+ V+ L  + V + 
Sbjct: 415 --------GPWHTAVVASSGQLFTFGDGTFGALG--HGDRRSTSVPREVESLIGLIVTKV 464

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
             G  H     ++ VV  T++ +    D S+                    G+++TWG+ 
Sbjct: 465 ACGVWH-----TAAVVEVTNEASEAEVDSSR--------------------GQVFTWGDG 499

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV--Q 238
           E GQ+G  +++T +  P+ V SL N  I  +ACG  HS  +S++ SR + + +GS    Q
Sbjct: 500 EKGQLGHGDNDTKLL-PECVISLTNENICQVACG--HSLTVSRT-SRGHVYTMGSTAYGQ 555

Query: 239 LDSPKSVHKTPQLIHGPWIASPVAMTA 265
           L +P +    P+ + G  + + V   A
Sbjct: 556 LGNPTAKGNFPERVEGDIVEASVEEIA 582



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 20/234 (8%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WH+  +   G++FT+G  T G LG    D++S S+P+ V+ L  + V +   G  H  
Sbjct: 415 GPWHTAVVASSGQLFTFGDGTFGALG--HGDRRSTSVPREVESLIGLIVTKVACGVWHTA 472

Query: 63  VLTSTTGLWHSLALNDC-GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
            +   T       ++   G+VFTWG    GQLG    D  ++ +P+ V  L + ++ Q  
Sbjct: 473 AVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLG--HGDNDTKLLPECVISLTNENICQVA 530

Query: 122 AGYSHCLVLTSSG-VVTCTHKENGCGSDPS------QGVQSNLVQDSHTTITS------- 167
            G+S  +  TS G V T      G   +P+      + V+ ++V+ S   I         
Sbjct: 531 CGHSLTVSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHVAV 590

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
           L S  E+YTWG    GQ+G  N      +P  V  L    +  I CG+N + V+
Sbjct: 591 LTSKSEIYTWGKGLNGQLGHGNVENK-REPAVVGFLREKQVKAITCGSNFTAVI 643


>gi|242024187|ref|XP_002432511.1| ubiquitin-protein ligase E3A, putative [Pediculus humanus corporis]
 gi|212517949|gb|EEB19773.1| ubiquitin-protein ligase E3A, putative [Pediculus humanus corporis]
          Length = 931

 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 98/200 (49%), Gaps = 32/200 (16%)

Query: 902  VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCN-------YPFIFDAKAKTTLL 954
            + +  FY   L+   ++  D+  + S    G+T DF+ N       Y FI     KT  L
Sbjct: 492  IPFHEFYNEPLSDAVEMDKDFAYYKSDF--GNTLDFVKNKKFSFMFYSFILTPATKTLGL 549

Query: 955  EMDQRIQM--EHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIREL---AQYTT 1009
              D RI+M  E  M+      F QT      N YL+++V RD+I++D + EL   A    
Sbjct: 550  CYDNRIRMYSERRMS------FFQTAVGQPANPYLKLKVRRDHIIDDALVELEMVAMENP 603

Query: 1010 NDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEET 1069
             D KK L             V+F GE+  D GGV +EF  L+++EI +P YGMF   +ET
Sbjct: 604  KDLKKQL------------VVEFEGEQGIDEGGVSKEFFQLIVEEIFNPDYGMFVYQQET 651

Query: 1070 RSIWFSEDTFEDQNMYFLIG 1089
             ++WF+  +FE    + LIG
Sbjct: 652  ETVWFNPTSFESDAQFTLIG 671



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 64/99 (64%), Gaps = 1/99 (1%)

Query: 720 YGITEYE-ETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y+ ET ++WF+  +FE      LIG + GLAIYN  I+++ FP+ +YKK++ +  
Sbjct: 642 YGMFVYQQETETVWFNPTSFESDAQFTLIGIVLGLAIYNNIILDVRFPMVVYKKLMGKRG 701

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
              D++D +PTL   L+++LDY E D+EDV   TFR  Y
Sbjct: 702 TFYDVQDWNPTLFAGLKELLDYEEDDIEDVLIQTFRVCY 740


>gi|449304555|gb|EMD00562.1| hypothetical protein BAUCODRAFT_62145 [Baudoinia compniacensis UAMH
            10762]
          Length = 1216

 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 22/176 (12%)

Query: 917  DIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQ 976
            D+  D+  W + R   +     C YP      AK  +LE D R QME    +  F   ++
Sbjct: 761  DLLADFKVWETRRDKFA----FCQYPLFLSMGAKIKILEYDARRQMEIKAREAYFDSVIR 816

Query: 977  TFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTT---NDFKKPLKVNDTSPIYLAPQVKFR 1033
                  L+ Y  + + RD +V+D++R++++       + KK L+V+            F 
Sbjct: 817  Q---RALDGYFNLRIRRDCMVDDSLRQISEAVGAGHEELKKGLRVH------------FE 861

Query: 1034 GEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            GEE  DAGG R+E+ ++L+++I DP +GMF   +E+ + +F+ ++FE  + Y+L+G
Sbjct: 862  GEEGVDAGGPRKEWFLMLVRDIFDPNHGMFVYDDESHTCYFNPNSFETSDQYYLVG 917



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 20/103 (19%)

Query: 718 NHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
           NH      +E+ + +F+ ++FE  +  +L+G L GLAIYN TI+++  P   ++K+L   
Sbjct: 887 NHGMFVYDDESHTCYFNPNSFETSDQYYLVGALLGLAIYNSTILDVALPPFAFRKLLSAA 946

Query: 778 --------------------ILLQDLKDLSPTLAKSLQDILDY 800
                                 + DL +  P+LA  LQ +LD+
Sbjct: 947 PSSATTGTVASITGTKGQMTYTVSDLAEFRPSLAAGLQQLLDF 989


>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
          Length = 4191

 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 136/308 (44%), Gaps = 52/308 (16%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LAL + G V++WG   +G+LG  +     Q  P+R+ G      +     Y H     
Sbjct: 443 HTLALAETGVVYSWGDGDYGKLGHGNCATHKQ--PERITG----PFLGKTIKYIHA---- 492

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS A+ D G+++TWG   HG+LG    D  ++ +P +V GLA V  V AC G S
Sbjct: 493 ---GYRHSAAVTDDGKLYTWGEGDHGRLG--HGDSNARYVPTQVAGLAEVGSV-AC-GSS 545

Query: 126 HCLVLTSSGVVTCT-----HKENGCGS----------DPSQGVQSNLVQDSHTTITSLNS 170
           H LV++  G    +     H + G G           +  QG+    V        +L +
Sbjct: 546 HTLVVSKDGKTVWSFGSGEHGKLGTGELGKVYRPQVVEALQGLTIQKVCAGTWFSMALTT 605

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
            GE+YTWG+     +G  +++  V  P  VE L    I  I+ G NH   L+     ++A
Sbjct: 606 AGEVYTWGSGAI--LGKGSADAIVNLPMYVEDLAQYRIVDISAGDNHCLALTDE-HEVFA 662

Query: 231 FGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSI 290
           +G  S  Q     +   +P       I  P+ +   E        G+ +++I +G  HS+
Sbjct: 663 WGTNSMGQCGQGHTC--SP-------ITRPLKVIGLE--------GVSIRQISAGTSHSM 705

Query: 291 VTVTKSSD 298
              + S++
Sbjct: 706 AWTSMSTE 713



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 55/228 (24%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HSLAL + GEVF+WG    G+LG  + D+  Q  P++++ L +  VVQ   G+ H  V+T
Sbjct: 3423 HSLALAESGEVFSWGDGDFGKLGHGNPDR--QRRPRQIEALQTEQVVQVACGFKHSAVVT 3480

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            S             G++FT+G    G+LGL S   K   +P+RV  L    + Q   G +
Sbjct: 3481 SD------------GKLFTFGNGDFGKLGLGSVANK--KLPERVMALEGYRIGQVACGLN 3526

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H   +++ G+                                      ++T+G  +YG++
Sbjct: 3527 HTACVSTDGMT-------------------------------------VWTFGEGDYGKL 3549

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
            G+  +   +  PQ+VE++ NL I  + CG + +  L+K   +++  GI
Sbjct: 3550 GLGYATMKLL-PQKVETVCNLGIKKVGCGTHLTLFLTKD-GKVFVCGI 3595



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 110/238 (46%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ D G+++TWG   HG+LG    D  ++ +P +V GLA V  V AC G SH 
Sbjct: 492 AGYRHSAAVTDDGKLYTWGEGDHGRLG--HGDSNARYVPTQVAGLAEVGSV-AC-GSSHT 547

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           LV++            D   V+++G   HG+LG     K  +  P+ V+ L  +++ + C
Sbjct: 548 LVVS-----------KDGKTVWSFGSGEHGKLGTGELGKVYR--PQVVEALQGLTIQKVC 594

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQ-------------------DSH 162
           AG    + LT++G V       G G+   +G    +V                    D+H
Sbjct: 595 AGTWFSMALTTAGEVYTW----GSGAILGKGSADAIVNLPMYVEDLAQYRIVDISAGDNH 650

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L    E++ WG N  GQ G  ++ + +T+P +V  L  + I  I+ G +HS  
Sbjct: 651 CL--ALTDEHEVFAWGTNSMGQCGQGHTCSPITRPLKVIGLEGVSIRQISAGTSHSMA 706



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 52/221 (23%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L S+SV+ +  G+    + TS     HS
Sbjct: 3376 GTVLACGEGSYGRLGQGNSDD-----------LHSLSVISSLQGFVITDLATSVGSDGHS 3424

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL + GEVF+WG    G+LG  + D+  Q  P++++ L +  VVQ   G+ H  V+TS 
Sbjct: 3425 LALAESGEVFSWGDGDFGKLGHGNPDR--QRRPRQIEALQTEQVVQVACGFKHSAVVTSD 3482

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L+T+GN ++G++G+  S   
Sbjct: 3483 --------------------------------------GKLFTFGNGDFGKLGL-GSVAN 3503

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
               P+RV +L    I  +ACG NH+  +S     ++ FG G
Sbjct: 3504 KKLPERVMALEGYRIGQVACGLNHTACVSTDGMTVWTFGEG 3544



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 37/241 (15%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
           +V+ WG ++  QL     +++   +P + K    V  V+A              G + + 
Sbjct: 349 DVYVWGSNSSHQLA--EGNQEKILMPVKSKMFTQVQQVEA--------------GQYCTF 392

Query: 75  ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY-SHCLVLTSS 133
           A++  G V   G  ++G+LGL   +  +QS+PKR+     V  + +  G   H L L  +
Sbjct: 393 AIHWDGSVSACGKGSYGRLGL--GESSNQSLPKRILLDCVVKKLSSSKGSDGHTLALAET 450

Query: 134 GVV---------------TCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWG 178
           GVV                 THK+    + P  G     +   +    ++   G+LYTWG
Sbjct: 451 GVVYSWGDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVTDDGKLYTWG 510

Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
             ++G++G  +SN     P +V  L    +  +ACG++H+ V+SK    +++FG G   +
Sbjct: 511 EGDHGRLGHGDSNARYV-PTQVAGLAE--VGSVACGSSHTLVVSKDGKTVWSFGSGEHGK 567

Query: 239 L 239
           L
Sbjct: 568 L 568



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 26/172 (15%)

Query: 81   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC-LVLTSSG-VVTC 138
            + + WG D HGQL   +    S S+P +V+   S S+ +      +C  V+ S G V+ C
Sbjct: 3328 KAYMWGSDRHGQL---AELGYSASVPVQVE---SFSIARKIICGQNCTFVIQSDGTVLAC 3381

Query: 139  THKENG-CGSDPS---------QGVQSNLVQDSHTTITS------LNSPGELYTWGNNEY 182
                 G  G   S           +Q  ++ D  T++ S      L   GE+++WG+ ++
Sbjct: 3382 GEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVFSWGDGDF 3441

Query: 183  GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
            G++G  N +    +P+++E+L    +  +ACG  HS V++ S  +L+ FG G
Sbjct: 3442 GKLGHGNPDRQ-RRPRQIEALQTEQVVQVACGFKHSAVVT-SDGKLFTFGNG 3491



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 121/302 (40%), Gaps = 56/302 (18%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G    G+LGL S   K   +P+RV  L    + Q   G +H  
Sbjct: 3472 GFKHSAVVTSDGKLFTFGNGDFGKLGLGSVANK--KLPERVMALEGYRIGQVACGLNHTA 3529

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             + ST G+           V+T+G   +G+LGL  A  K   +P++V+ + ++ + +   
Sbjct: 3530 CV-STDGM----------TVWTFGEGDYGKLGLGYATMK--LLPQKVETVCNLGIKKVGC 3576

Query: 123  GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
            G    L LT  G V                    K     S     ++   V   H  + 
Sbjct: 3577 GTHLTLFLTKDGKVFVCGIDRMPWHSLFRERAVFKPQIMTSLSDYSIEDLAVGTEH--VL 3634

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK--- 223
             L + G++  WG    GQ+G+ +  + V  P+ +  L +  I  I+ G  HS   S    
Sbjct: 3635 FLTTCGKVLGWGMTGEGQLGLPHV-SLVRHPEIITELSDKGIRQISTGRTHSAAWSAPPL 3693

Query: 224  -----SVSRLYAFGI------------GSAVQLDSPKSV--HKTPQLIHGPWIASPVAMT 264
                  V+R   FG+            G +++L   + +  H+   +++  W   P++  
Sbjct: 3694 PQRVPGVTRSLTFGLPANIPSQYDHLQGLSIELIQARVMFLHRFSDMLYSCWTLMPLSHQ 3753

Query: 265  AG 266
             G
Sbjct: 3754 EG 3755


>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
          Length = 5197

 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 111/237 (46%), Gaps = 35/237 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +Q  PK V  LA   VVQ   G     
Sbjct: 3388 GSSHSAAITSSGELYTWGLGEYGRLG--HGDNCTQLKPKLVTALADHRVVQVACGSRDA- 3444

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +L L + G VF+WG    G+LG      +  SIP +V+ L  V V+Q   
Sbjct: 3445 ---------QTLCLTEEGLVFSWGDGDFGKLG--RGGSEGCSIPHQVERLNGVGVMQIEC 3493

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-------PSQGVQSNLVQDSHTTITSLN-- 169
            G    L LT SG V    K +    G G+D       P QG++   V   H  + +L+  
Sbjct: 3494 GAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKV--IHVAVGALHCL 3551

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVT-KPQRVESLVNLPIALIACGANHSFVLS 222
                 G++Y WG+N++GQ G  + NT V  KP  V  L  + +  +ACG++HS   S
Sbjct: 3552 AVTDSGQVYAWGDNDHGQQG--SGNTIVNKKPSLVLGLDGIFVNRVACGSSHSVAWS 3606



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 123/271 (45%), Gaps = 37/271 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++AL   G+VF+WG    G+LG    ++ +   PK ++ L +  +     G SH 
Sbjct: 3335 SGGKHAMALTLDGKVFSWGEGEDGKLG--HGNRLTLEKPKLIETLRTKRIRDIACGSSHS 3392

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE++TWG   +G+LG    D  +Q  PK V  LA   VVQ  
Sbjct: 3393 AAITSS------------GELYTWGLGEYGRLG--HGDNCTQLKPKLVTALADHRVVQVA 3438

Query: 122  AGY--SHCLVLTSSGVV----------TCTHKENGCGSDPSQ-----GVQSNLVQDSHTT 164
             G   +  L LT  G+V                 GC S P Q     GV    ++     
Sbjct: 3439 CGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGC-SIPHQVERLNGVGVMQIECGAQF 3497

Query: 165  ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              +L   GE++TWG  +Y ++G + ++  V KP  ++ L    +  +A GA H   ++ S
Sbjct: 3498 SLALTKSGEVWTWGKGDYYRLG-HGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDS 3556

Query: 225  VSRLYAFGIGSAVQLDSPKS-VHKTPQLIHG 254
              ++YA+G     Q  S  + V+K P L+ G
Sbjct: 3557 -GQVYAWGDNDHGQQGSGNTIVNKKPSLVLG 3586



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 58/288 (20%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H LAL+  GEVF+WG    G+LG    ++ S   PK ++ L+ + V+    G +H 
Sbjct: 4471 SGGKHCLALSSDGEVFSWGEGEDGKLG--HGNRDSYDRPKLIEALSGIGVIDIACGSAHS 4528

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS             G V TWG   +G+LG    D + Q  PK         +V+A 
Sbjct: 4529 ACITSQ------------GHVLTWGKGRYGRLG--HGDSEDQLQPK---------LVEAL 4565

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
             GY    +               CGS  +Q +              +     +++WG+ +
Sbjct: 4566 LGYRAIDI--------------ACGSGDAQTL-------------CITDDDNVWSWGDGD 4598

Query: 182  YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
            YG++G   S+     P ++ESL  L +  + CG+  S  L++S S +Y +G G   +L  
Sbjct: 4599 YGKLGRGGSDGCKV-PMKIESLAGLGVTKVECGSQFSVALTRSGS-VYTWGKGDYHRLGH 4656

Query: 242  PKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
              + H + P+ +        +++  G    V+ S G    ++++ GD+
Sbjct: 4657 GNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDG---GEVFTWGDN 4701



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 29/234 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G V TWG   +G+LG    D + Q  PK V+ L     +    G     
Sbjct: 4524 GSAHSACITSQGHVLTWGKGRYGRLG--HGDSEDQLQPKLVEALLGYRAIDIACG----- 4576

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L + D   V++WG   +G+LG   +D     +P +++ LA + V +   
Sbjct: 4577 -----SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD--GCKVPMKIESLAGLGVTKVEC 4629

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSL 168
            G    + LT SG V    K +    G G+             QG +   +        + 
Sbjct: 4630 GSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVAC 4689

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            +  GE++TWG+N+ GQ+G + + + + +P+ V+SL    I  + CG+ H+  LS
Sbjct: 4690 SDGGEVFTWGDNDEGQLG-DGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4742



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 133/311 (42%), Gaps = 49/311 (15%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL   G+VF+WG    G+LG    D  S+ IP R+  LA   V     G S+     
Sbjct: 641 HVLALTATGDVFSWGNGEGGRLG--HGDTSSKDIPTRIVALAERQVTGVFCGSSY----- 693

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKGLASVSVVQACAGY 124
                  S A+   GE++TWG  T+G+LG   S DK   +I + +K    + V   C G 
Sbjct: 694 -------SAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALGC-GD 745

Query: 125 SHCLVLTSSGVVTC------THKENGCGSDPSQGVQSNLVQDSHTTI---------TSLN 169
           +H L +T +G+V            NG  +  S  V   L Q S   +          +L 
Sbjct: 746 AHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALG 805

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G +Y+WG    G++G  +S  T + P+ +++L    I  +A G  H   L+ S   LY
Sbjct: 806 RDGTVYSWGKGHGGRLGHGHSEHTAS-PKAIQALEGKNIVDLAVGLAHCLALTAS-GELY 863

Query: 230 AFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHS 289
            +G     QL  P  V + P ++  P + +P                L +  + +GG  S
Sbjct: 864 GWGRNDFQQL-CPPCVTRDP-IVLLPILTTPPT--------------LRIAGMAAGGAQS 907

Query: 290 IVTVTKSSDGV 300
           IV    S+ G+
Sbjct: 908 IVWCHSSTLGI 918



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 84/204 (41%), Gaps = 64/204 (31%)

Query: 38  SIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLES 97
           + PK ++GL SV++VQ  A   HC          H LAL   G+VF+WG    G+LG   
Sbjct: 617 TAPKPIEGLESVNIVQLAA---HCEGR-------HVLALTATGDVFSWGNGEGGRLG--H 664

Query: 98  ADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNL 157
            D  S+ IP R+  LA   V     G S+   +T++                        
Sbjct: 665 GDTSSKDIPTRIVALAERQVTGVFCGSSYSAAITAA------------------------ 700

Query: 158 VQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN-------TTVTKPQRVESLVNLPIAL 210
                         GELYTWG   YG++G  NS          V K QRV     + +AL
Sbjct: 701 --------------GELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRV-----IHVAL 741

Query: 211 IACGANHSFVLSKSVSRLYAFGIG 234
             CG  HS  ++ +   +YA+G G
Sbjct: 742 -GCGDAHSLCVTDT-GIVYAWGDG 763



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 53/208 (25%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+++  G  T+G+LGL      +   PK+V  + S  VV+  A +S         G  H+
Sbjct: 3293 GKLYACGEGTNGRLGL--GHNNNVPTPKQVP-ILSQYVVKKVAVHS---------GGKHA 3340

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL   G+VF+WG    G+LG    ++ +   PK ++ L +  +     G SH   +TSS
Sbjct: 3341 MALTLDGKVFSWGEGEDGKLG--HGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSS 3398

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            G                                      ELYTWG  EYG++G +  N T
Sbjct: 3399 G--------------------------------------ELYTWGLGEYGRLG-HGDNCT 3419

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVL 221
              KP+ V +L +  +  +ACG+  +  L
Sbjct: 3420 QLKPKLVTALADHRVVQVACGSRDAQTL 3447



 Score = 61.6 bits (148), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 20/128 (15%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S+AL   G V+TWG   + +LG  + D   +  PK+V  L    ++    G  HC+    
Sbjct: 4634 SVALTRSGSVYTWGKGDYHRLGHGNTDHVRR--PKKVAALQGKKIISIATGSLHCV---- 4687

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGY 124
                    A +D GEVFTWG +  GQLG    D    +I  P+ V+ L    +V+   G 
Sbjct: 4688 --------ACSDGGEVFTWGDNDEGQLG----DGTVSAIQRPRLVQSLQGKHIVKVICGS 4735

Query: 125  SHCLVLTS 132
            +H L L++
Sbjct: 4736 AHTLALST 4743



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 29/198 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG  T+G+LG  +++ K   +P  V+ L    V+    G     
Sbjct: 690 GSSYSAAITAAGELYTWGRGTYGRLGHGNSEDK--HLPTIVQVLKQQRVIHVALG----- 742

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQAC 121
                 G  HSL + D G V+ WG    G+LG  + +    S+P  ++    S   V+  
Sbjct: 743 -----CGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCN--GSSVPVAIELPQCSDGAVKVF 795

Query: 122 AGYSHCLVLTSSGVV-----------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT---S 167
           +G    + L   G V              H E+       Q ++   + D    +    +
Sbjct: 796 SGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHCLA 855

Query: 168 LNSPGELYTWGNNEYGQM 185
           L + GELY WG N++ Q+
Sbjct: 856 LTASGELYGWGRNDFQQL 873



 Score = 45.1 bits (105), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 6/67 (8%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYS 59
            TG  H +A +D GEVFTWG +  GQLG    D    +I  P+ V+ L    +V+   G +
Sbjct: 4681 TGSLHCVACSDGGEVFTWGDNDEGQLG----DGTVSAIQRPRLVQSLQGKHIVKVICGSA 4736

Query: 60   HCLVLTS 66
            H L L++
Sbjct: 4737 HTLALST 4743


>gi|379719198|ref|YP_005311329.1| protein ChiA12 [Paenibacillus mucilaginosus 3016]
 gi|378567870|gb|AFC28180.1| ChiA12 [Paenibacillus mucilaginosus 3016]
          Length = 1205

 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 128/274 (46%), Gaps = 42/274 (15%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LALN  G V+ WGG   GQLG  +        P +V+ L SV  + A           
Sbjct: 50  HTLALNANGTVWAWGG---GQLG--NGSTTGSPAPVQVQDLHSVEAIAAGGS-------- 96

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 H+LA+   G V+ WG + +GQLG  S     ++ P +V+GL   S+V A A Y 
Sbjct: 97  ------HNLAIKSDGTVWAWGFNGYGQLGDGST--TGRNTPVQVEGLR--SIVGAAAHYD 146

Query: 126 HCLVLTSSGVV-TCTHKENGCGSDPSQGVQSNLVQ----DSHTTITS-------LNSPGE 173
           H L L S G V      E G   D S+  +   V+    DS   I+S       + S G 
Sbjct: 147 HSLALKSDGTVWAWGRNEYGQLGDGSKTDRHTPVRVKGLDSVVAISSGFGYSLAVKSDGT 206

Query: 174 LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
           ++ WG NEYGQ+G N S T  + P +V+ L +  +  +A G  H+  + +    ++++G 
Sbjct: 207 VWAWGKNEYGQLG-NGSTTQSSAPVQVQGLHS--VTAVASGDYHNLAIKRD-GTVWSWGP 262

Query: 234 GSAVQLDSPKSVHK-TPQLIHGPWIASPVAMTAG 266
             A QL     + + TP  + G   +S V + AG
Sbjct: 263 NLAGQLGDGSDMDRYTPVQVEG--FSSAVDVDAG 294



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 125/264 (47%), Gaps = 45/264 (17%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL   G V+ WG + +GQLG  S  K  +  P RVKGL SV  + +  GYS      
Sbjct: 147 HSLALKSDGTVWAWGRNEYGQLGDGS--KTDRHTPVRVKGLDSVVAISSGFGYS------ 198

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                   LA+   G V+ WG + +GQLG  S  +   S P +V+GL SV+ V   +G  
Sbjct: 199 --------LAVKSDGTVWAWGKNEYGQLGNGSTTQS--SAPVQVQGLHSVTAV--ASGDY 246

Query: 126 HCLVLTSSGVVTC----THKENGCGSD-----PSQ--GVQSNLVQDS---HTTITSLNSP 171
           H L +   G V         + G GSD     P Q  G  S +  D+   H+   +L S 
Sbjct: 247 HNLAIKRDGTVWSWGPNLAGQLGDGSDMDRYTPVQVEGFSSAVDVDAGFGHS--LALKSD 304

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G ++ WGN ++ + G  +S  T  + Q ++S+V+     IA G  HS  + ++   ++A+
Sbjct: 305 GTVWAWGNYQFNEWGFGSS--TPVQVQELDSVVD-----IAAGTQHSLAV-RNDGTVWAW 356

Query: 232 GIGSAVQL-DSPKSVHKTPQLIHG 254
           G     QL D   +   TP  + G
Sbjct: 357 GKNDNGQLGDGTSTARLTPIKVQG 380



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 101/210 (48%), Gaps = 29/210 (13%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  +SLA+   G V+ WG + +GQLG  S  +   S P +V+GL SV+ V         
Sbjct: 193 SGFGYSLAVKSDGTVWAWGKNEYGQLGNGSTTQS--SAPVQVQGLHSVTAV--------- 241

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                 +G +H+LA+   G V++WG +  GQLG  S     +  P +V+G +  S V   
Sbjct: 242 -----ASGDYHNLAIKRDGTVWSWGPNLAGQLGDGS--DMDRYTPVQVEGFS--SAVDVD 292

Query: 122 AGYSHCLVLTSSGVVTC----THKENGCGSDPSQGVQ--SNLVQDSHTTITSL--NSPGE 173
           AG+ H L L S G V         E G GS     VQ   ++V  +  T  SL   + G 
Sbjct: 293 AGFGHSLALKSDGTVWAWGNYQFNEWGFGSSTPVQVQELDSVVDIAAGTQHSLAVRNDGT 352

Query: 174 LYTWGNNEYGQMGINNSNTTVTKPQRVESL 203
           ++ WG N+ GQ+G   S   +T P +V+  
Sbjct: 353 VWAWGKNDNGQLGDGTSTARLT-PIKVQGF 381


>gi|12325184|gb|AAG52535.1|AC013289_2 putative regulator of chromosome condensation; 48393-44372
           [Arabidopsis thaliana]
          Length = 1028

 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 48/267 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQ-ACAGYSH 60
           G +H+ A+   G++++WG  TH    L   ++ S  IPKRV G L  + V   AC     
Sbjct: 347 GDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVAC----- 401

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                   G WH+  +   G++FT+G  T G LG    D++S S+P+ V+ L  + V + 
Sbjct: 402 --------GPWHTAVVASSGQLFTFGDGTFGALG--HGDRRSTSVPREVESLIGLIVTKV 451

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
             G  H     ++ VV  T++ +    D S+                    G+++TWG+ 
Sbjct: 452 ACGVWH-----TAAVVEVTNEASEAEVDSSR--------------------GQVFTWGDG 486

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV--Q 238
           E GQ+G  +++T +  P+ V SL N  I  +ACG  HS  +S++ SR + + +GS    Q
Sbjct: 487 EKGQLGHGDNDTKLL-PECVISLTNENICQVACG--HSLTVSRT-SRGHVYTMGSTAYGQ 542

Query: 239 LDSPKSVHKTPQLIHGPWIASPVAMTA 265
           L +P +    P+ + G  + + V   A
Sbjct: 543 LGNPTAKGNFPERVEGDIVEASVEEIA 569



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 20/234 (8%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WH+  +   G++FT+G  T G LG    D++S S+P+ V+ L  + V +   G  H  
Sbjct: 402 GPWHTAVVASSGQLFTFGDGTFGALG--HGDRRSTSVPREVESLIGLIVTKVACGVWHTA 459

Query: 63  VLTSTTGLWHSLALNDC-GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
            +   T       ++   G+VFTWG    GQLG    D  ++ +P+ V  L + ++ Q  
Sbjct: 460 AVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLG--HGDNDTKLLPECVISLTNENICQVA 517

Query: 122 AGYSHCLVLTSSG-VVTCTHKENGCGSDPS------QGVQSNLVQDSHTTITS------- 167
            G+S  +  TS G V T      G   +P+      + V+ ++V+ S   I         
Sbjct: 518 CGHSLTVSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHVAV 577

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
           L S  E+YTWG    GQ+G  N      +P  V  L    +  I CG+N + V+
Sbjct: 578 LTSKSEIYTWGKGLNGQLGHGNVENK-REPAVVGFLREKQVKAITCGSNFTAVI 630


>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Felis catus]
          Length = 527

 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 97/231 (41%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV   A    C 
Sbjct: 136 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVVNIACGQMC- 192

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ + GEV+ WG + +GQLGL S+   +Q  P R+  L  + V +   
Sbjct: 193 ----------SMAVVNTGEVYVWGYNGNGQLGLGSSG--NQPTPCRISALQGIRVQRVAC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 241 GYAHTLVLTDE--------------------------------------GQVYAWGANSY 262

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC   H+         +Y +G
Sbjct: 263 GQLGTGNKSNQSYPAPVVVEK--DRIIEIAACHLAHTSAAKTQGGHVYMWG 311



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L+   +  AC  Y           
Sbjct: 39  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGKKI--ACLSY----------- 81

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE++TWG+N Y Q+G   +N  + 
Sbjct: 82  ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNHGLM 117

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  + ++  P+ + G
Sbjct: 118 PCHISTNLSNKQVTEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG 176


>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Felis catus]
          Length = 551

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 97/231 (41%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV   A    C 
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVVNIACGQMC- 216

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ + GEV+ WG + +GQLGL S+   +Q  P R+  L  + V +   
Sbjct: 217 ----------SMAVVNTGEVYVWGYNGNGQLGLGSSG--NQPTPCRISALQGIRVQRVAC 264

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 265 GYAHTLVLTDE--------------------------------------GQVYAWGANSY 286

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC   H+         +Y +G
Sbjct: 287 GQLGTGNKSNQSYPAPVVVEK--DRIIEIAACHLAHTSAAKTQGGHVYMWG 335



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L+   +  AC  Y           
Sbjct: 63  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGKKI--ACLSY----------- 105

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE++TWG+N Y Q+G   +N  + 
Sbjct: 106 ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNHGLM 141

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  + ++  P+ + G
Sbjct: 142 PCHISTNLSNKQVTEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG 200


>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
          Length = 3645

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE+++WG   +G+LG    D  +Q  PK VK L    VVQ   G     
Sbjct: 1916 GSSHSAAITSSGELYSWGLGEYGRLG--HGDNTTQLRPKLVKVLLGHRVVQVACGSRDA- 1972

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 1973 ---------QTLALTDEGMVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 2021

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G G+D     P   +G++   +   H  + +L+  
Sbjct: 2022 GAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKI--VHVAVGALHCL 2079

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G+++ WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 2080 AVTETGQVFAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2132



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 106/237 (44%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   GE++TWG   +G+LG    D + Q  PK V+ L    V+    G    
Sbjct: 2909 AGGAHSACITASGELYTWGKGRYGRLG--HGDSEDQLKPKLVEALQGHRVIDVACG---- 2962

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 2963 ------SGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 3014

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 3015 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3074

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    I  +ACG+ H+   S S
Sbjct: 3075 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKINRVACGSAHTLAWSTS 3130



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 123/268 (45%), Gaps = 35/268 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H LAL+  GE+++WG    G+LG    ++     P+ ++ L  V VV   AG +H 
Sbjct: 2857 SGGKHCLALSSEGELYSWGEAEDGKLG--HGNRSPCDRPRVIESLRGVEVVDIAAGGAHS 2914

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-A 120
              +T++            GE++TWG   +G+LG    D + Q  PK V+ L    V+  A
Sbjct: 2915 ACITAS------------GELYTWGKGRYGRLG--HGDSEDQLKPKLVEALQGHRVIDVA 2960

Query: 121  C-AGYSHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQDSHTTI------------ 165
            C +G +  L LT   +V      +    G   S G +  +  DS T +            
Sbjct: 2961 CGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 3020

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G +YTWG  +Y ++G + S+  V +P++V+ L    +  IA G+ H    ++  
Sbjct: 3021 VALTKSGAVYTWGKGDYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED- 3078

Query: 226  SRLYAFGIGSAVQL-DSPKSVHKTPQLI 252
              +Y +G     QL D   +  + P+L+
Sbjct: 3079 GEVYTWGDNDEGQLGDGTTNAIQRPRLV 3106



 Score = 80.5 bits (197), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 124/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 1863 SGGRHAMALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 1920

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE+++WG   +G+LG    D  +Q  PK VK L    VVQ  
Sbjct: 1921 AAITSS------------GELYSWGLGEYGRLG--HGDNTTQLRPKLVKVLLGHRVVQVA 1966

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G+V      +    G G      +  N+ + +   +          
Sbjct: 1967 CGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 2026

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + ++  V KPQ VE L    I  +A GA H   ++++ 
Sbjct: 2027 LALTKSGVVWTWGKGDYFRLG-HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTET- 2084

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             +++A+G      Q +   +V++ P L+ G
Sbjct: 2085 GQVFAWGDNDHGQQGNGTTTVNRKPTLVQG 2114



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 125/266 (46%), Gaps = 38/266 (14%)

Query: 9    ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTT 68
            A+   G+V+  G  T+G+LGL      +  IP+++  L++  VV+  A +S         
Sbjct: 1815 AVTAEGKVYACGEATNGRLGL-GLSSGTIPIPRQISALSNY-VVKKVAVHS--------- 1863

Query: 69   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 128
            G  H++AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH  
Sbjct: 1864 GGRHAMALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSA 1921

Query: 129  VLTSSGVVTC----THKENGCGSDPSQGVQSNLVQ---------------DSHTTITSLN 169
             +TSSG +       +   G G + +Q ++  LV+               D+ T   +L 
Sbjct: 1922 AITSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLVKVLLGHRVVQVACGSRDAQT--LALT 1978

Query: 170  SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
              G +++WG+ ++G++G   S      PQ +E L    +  I CGA  S  L+KS   ++
Sbjct: 1979 DEGMVFSWGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVW 2036

Query: 230  AFGIGSAVQLDSPKSVH-KTPQLIHG 254
             +G G   +L     VH + PQ++ G
Sbjct: 2037 TWGKGDYFRLGHGTDVHVRKPQMVEG 2062



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 130/321 (40%), Gaps = 69/321 (21%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 2756 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPTEALATLRPVQLIGGEQTLFAVT 2812

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GE++
Sbjct: 2813 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELY 2872

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
            +WG    G+LG    ++     P+ ++ L  V VV   AG +H   +T+SG +    K  
Sbjct: 2873 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGR 2930

Query: 144  ----GCGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMG 186
                G G    Q ++  LV+    H  I      G+           +++WG+ +YG++G
Sbjct: 2931 YGRLGHGDSEDQ-LKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLG 2989

Query: 187  INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH 246
               S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H
Sbjct: 2990 RGGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDH 3047

Query: 247  -KTPQLIHGPWIASPVAMTAG 266
             + P+ + G      +A+  G
Sbjct: 3048 VRRPRQVQGLQGKKVIAIATG 3068



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 40/228 (17%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T+        
Sbjct: 1769 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTAE------- 1819

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L++  V  V   +G  H + LT 
Sbjct: 1820 -----GKVYACGEATNGRLGL-GLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTV 1873

Query: 133  SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN------------------SPGEL 174
             G V       G G D   G  S +  D    I +L                   S GEL
Sbjct: 1874 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 1929

Query: 175  YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            Y+WG  EYG++G +  NTT  +P+ V+ L+   +  +ACG+  +  L+
Sbjct: 1930 YSWGLGEYGRLG-HGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLA 1976



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 59/135 (43%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG    D   +  P+ V+GL    +V    G  HCL
Sbjct: 2022 GAQFSLALTKSGVVWTWGKGDYFRLG-HGTDVHVRK-PQMVEGLRGKKIVHVAVGALHCL 2079

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T T            G+VF WG + HGQ G  +        P  V+GL    + +   
Sbjct: 2080 AVTET------------GQVFAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 2125

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 2126 GSSHSVAWTTVDVTT 2140



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 27/147 (18%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S+AL   G V+TWG   + +LG  S D   +  P++V+GL    V+    G  HC+  T 
Sbjct: 3020 SVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQVQGLQGKKVIAIATGSLHCVCCTE 3077

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGY 124
                         GEV+TWG +  GQLG    D  + +I  P+ V  L    + +   G 
Sbjct: 3078 D------------GEVYTWGDNDEGQLG----DGTTNAIQRPRLVAALQGKKINRVACGS 3121

Query: 125  SHCLVLTSSGVVTCTHKENGCGSDPSQ 151
            +H L  ++S       K    G  P+Q
Sbjct: 3122 AHTLAWSTS-------KPTNAGKLPAQ 3141


>gi|255083701|ref|XP_002508425.1| predicted protein [Micromonas sp. RCC299]
 gi|226523702|gb|ACO69683.1| predicted protein [Micromonas sp. RCC299]
          Length = 261

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 82/276 (29%), Positives = 122/276 (44%), Gaps = 42/276 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H  AL+  G + TWG  + G+LG          IP+RV  ++ V V Q   G +H +
Sbjct: 4   GASHCAALDPDGALMTWGLASSGELGHGGWTPIEVDIPRRVNSMSGVKVTQIATGANHTV 63

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V++   GLW            T G   HGQLG            +R++ L  ++V +A A
Sbjct: 64  VVSEGGGLW------------TCGRGRHGQLG--HGHFNDAGPLQRLEALRGMNVTRAVA 109

Query: 123 GYSHCLVLTSSGVV----TCTHKENGCGSD-----PSQGV----------QSNLVQDS-- 161
           G SH + LT  G V     C + + G G D     P  GV          +  +V+ +  
Sbjct: 110 GGSHTVCLTDCGSVWSWGACRYGQLGLGDDWEGRTPKNGVWIKVPCACGDRCKIVRAAAG 169

Query: 162 --HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
             H+ +  L + G + T G+N YGQ+G  +         RVESL    +A + CG +H+ 
Sbjct: 170 GNHSAV--LTACGAVMTTGSNSYGQLGHGDIKKRYAF-TRVESLRGSRLATVDCGEDHTG 226

Query: 220 VLSKSVSRLYAFGIGSAVQLDSPKS-VHKTPQLIHG 254
            +  S  RLY +G G   QL S     H +P  ++G
Sbjct: 227 AVGDS-GRLYLWGRGDWGQLGSGDGRSHWSPAPVNG 261


>gi|198420568|ref|XP_002123770.1| PREDICTED: similar to guanine nucleotide exchange factor p532,
           partial [Ciona intestinalis]
          Length = 2540

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 110/235 (46%), Gaps = 38/235 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS  +   G++FTWG   +G+LGL   D  S+++P  VK +AS   V    G SH L
Sbjct: 431 GYRHSACVTQEGQLFTWGEGDYGRLGL--GDNTSRNVPVLVKDIASAGSV--VCGSSHTL 486

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           VL             D   V+++G   +G+LG    D      PK ++ +  +   + CA
Sbjct: 487 VLA-----------QDGLTVWSFGAGDNGKLG--HGDTSRVYRPKVIESINGMMFYKLCA 533

Query: 123 GYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQDSHTT----ITS----- 167
           G  + L L  SG V       C     GCGS  +  ++  L+ +   T    ITS     
Sbjct: 534 GSQYSLALNDSGQVFSWGCGACL----GCGSPDATFMKPTLIDELTFTRVVDITSGDGHC 589

Query: 168 --LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
             L    E+Y WGNN  GQ G+ ++N+ ++ P +V+ L N+ I  I+ G +HS  
Sbjct: 590 MALTHNNEVYCWGNNAMGQCGLGHTNSPISVPTQVQQLNNVTIHQISAGTSHSIA 644



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 58/263 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYSHCLVL 64
           H+LAL   G +F+WG   +G+LG  S+   +   PK ++G LA   VV   AGY H   +
Sbjct: 381 HTLALTTEGCIFSWGDGDYGKLGHGSS--LTHKSPKIIEGPLARRIVVCVSAGYRHSACV 438

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
           T              G++FTWG   +G+LGL   D  S+++P  VK +AS   V    G 
Sbjct: 439 TQE------------GQLFTWGEGDYGRLGL--GDNTSRNVPVLVKDIASAGSV--VCGS 482

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
           SH LVL   G+                                      ++++G  + G+
Sbjct: 483 SHTLVLAQDGLT-------------------------------------VWSFGAGDNGK 505

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G +   + V +P+ +ES+  +    +  G+ +S  L+ S  +++++G G+ +   SP +
Sbjct: 506 LG-HGDTSRVYRPKVIESINGMMFYKLCAGSQYSLALNDS-GQVFSWGCGACLGCGSPDA 563

Query: 245 VHKTPQLIHGPWIASPVAMTAGE 267
               P LI        V +T+G+
Sbjct: 564 TFMKPTLIDELTFTRVVDITSGD 586



 Score = 43.5 bits (101), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  H +AL    EV+ WG +  GQ GL   +    S+P +V+ L +V++ Q  AG SH 
Sbjct: 584 SGDGHCMALTHNNEVYCWGNNAMGQCGLGHTNSPI-SVPTQVQQLNNVTIHQISAGTSHS 642

Query: 62  LVLTSTTGLWHSLA 75
           +  T+     H ++
Sbjct: 643 IAYTAMPSDRHVIS 656


>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
          Length = 4833

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 105/237 (44%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   GE+FTWG   +G+LG    D + Q  PK V  L    V+    G    
Sbjct: 4097 AGGAHSACITASGELFTWGKGRYGRLG--HGDSEDQLKPKLVDALQGHRVIDVACG---- 4150

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     IP ++  L  + VV+  
Sbjct: 4151 ------SGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSD--GCKIPMKIDSLTGLGVVKVE 4202

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4203 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4262

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    I  +ACG+ H+   S S
Sbjct: 4263 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKINRVACGSAHTLAWSTS 4318



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 109/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE+++WG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3104 GSSHSAAITSSGELYSWGLGEYGRLG--HGDNTTQLRPKLVKVLLGHRVIQVACGSRDA- 3160

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  ++P+ ++ L    V Q   
Sbjct: 3161 ---------QTLALTDEGFVFSWGDGDFGKLG--RGGSEGCNVPQNIERLNGQGVCQIEC 3209

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SGVV    K +    G G+D     P   +G++   +   H  + +L+  
Sbjct: 3210 GAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKI--VHVAVGALHCL 3267

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3268 AVTDTGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3320



 Score = 83.6 bits (205), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 35/268 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H LAL+  GEV++WG    G+LG    ++     P+ ++ L  V VV   AG +H 
Sbjct: 4045 SGGKHCLALSSEGEVYSWGEAEDGKLG--HGNRSPCDRPRVIESLRGVEVVDIAAGGAHS 4102

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-A 120
              +T++            GE+FTWG   +G+LG    D + Q  PK V  L    V+  A
Sbjct: 4103 ACITAS------------GELFTWGKGRYGRLG--HGDSEDQLKPKLVDALQGHRVIDVA 4148

Query: 121  C-AGYSHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQDSHTTI------------ 165
            C +G +  L LT   +V      +    G   S G +  +  DS T +            
Sbjct: 4149 CGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVVKVECGSQFS 4208

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G +YTWG  +Y ++G + S+  V +P++V+ L    +  IA G+ H    ++  
Sbjct: 4209 VALTKSGAVYTWGKGDYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED- 4266

Query: 226  SRLYAFGIGSAVQL-DSPKSVHKTPQLI 252
              +Y +G     QL D   +  + P+L+
Sbjct: 4267 GEVYTWGDNDEGQLGDGTTNAIQRPRLV 4294



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3051 SGGRHAMALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3108

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE+++WG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3109 AAITSS------------GELYSWGLGEYGRLG--HGDNTTQLRPKLVKVLLGHRVIQVA 3154

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
             G   +  L LT  G V      +    G G      V  N+ + +   +          
Sbjct: 3155 CGSRDAQTLALTDEGFVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFS 3214

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G ++TWG  +Y ++G + ++  V KPQ VE L    I  +A GA H   ++ + 
Sbjct: 3215 LALTKSGVVWTWGKGDYFRLG-HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDT- 3272

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             ++YA+G      Q +   +V++ P L+ G
Sbjct: 3273 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3302



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 29/236 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   Q+ P  V     + VV    G     
Sbjct: 550 GSTYSAAITADGELYTWGRGNYGRLGHGSSE--DQTTPMVVTAFKGLKVVDVACG----- 602

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK V+ L  + +V+ C 
Sbjct: 603 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLVEKLQDLDIVKVCC 655

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSL 168
           G    + LT  G V    K +    G G+D            QG +   V    T   +L
Sbjct: 656 GSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLAL 715

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              GE+ +WG+N+  Q   +   +   +P+ +  L +  I  I+CG   SF  S S
Sbjct: 716 TDDGEVLSWGSNDKLQH-FDTLFSNKKQPKALPGLNSKHIVGISCGPGQSFAWSSS 770



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 129/321 (40%), Gaps = 69/321 (21%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3944 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTSTEALATLRPVQLIGGEQTLFAVT 4000

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4001 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVY 4060

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
            +WG    G+LG    ++     P+ ++ L  V VV   AG +H   +T+SG +    K  
Sbjct: 4061 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGR 4118

Query: 144  ----GCGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMG 186
                G G    Q ++  LV     H  I      G+           +++WG+ +YG++G
Sbjct: 4119 YGRLGHGDSEDQ-LKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLG 4177

Query: 187  INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH 246
               S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H
Sbjct: 4178 RGGSDGCKI-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDH 4235

Query: 247  -KTPQLIHGPWIASPVAMTAG 266
             + P+ + G      +A+  G
Sbjct: 4236 VRRPRQVQGLQGKKVIAIATG 4256



 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 107/248 (43%), Gaps = 51/248 (20%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL+  GEVF+WG    G+LG    D      PK +    + +  QA     H     
Sbjct: 497 HYLALSSNGEVFSWGCGDGGRLG--HGDTTYLEEPKMI---GTFNGKQAGKHVVHV---- 547

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  +S A+   GE++TWG   +G+LG  S++   Q+ P  V     + VV       
Sbjct: 548 -ACGSTYSAAITADGELYTWGRGNYGRLGHGSSE--DQTTPMVVTAFKGLKVVDVA---- 600

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CGS            D+ T   + N  G++++WG+ +YG++
Sbjct: 601 -------------------CGSG-----------DAQTLAVTEN--GQVWSWGDGDYGKL 628

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
           G   S+   T P+ VE L +L I  + CG+  S  L+K   ++Y +G G   +L      
Sbjct: 629 GRGGSDGCKT-PKLVEKLQDLDIVKVCCGSQFSVALTKD-GQVYTWGKGDNQRLGHGTDE 686

Query: 246 H-KTPQLI 252
           H + P+L+
Sbjct: 687 HVRYPKLL 694



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 109/262 (41%), Gaps = 49/262 (18%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2957 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3007

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+++  G  T+G+LGL      +  IP+++  L++  +  V   +G  H + LT 
Sbjct: 3008 -----GKIYACGEATNGRLGL-GLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTV 3061

Query: 133  SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN------------------SPGEL 174
             G V       G G D   G  S +  D    I +L                   S GEL
Sbjct: 3062 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3117

Query: 175  YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGA---------NHSFVLSKSV 225
            Y+WG  EYG++G +  NTT  +P+ V+ L+   +  +ACG+         +  FV S   
Sbjct: 3118 YSWGLGEYGRLG-HGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGD 3176

Query: 226  SRLYAFGIGSAVQLDSPKSVHK 247
                  G G +   + P+++ +
Sbjct: 3177 GDFGKLGRGGSEGCNVPQNIER 3198



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 16/135 (11%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   G V+TWG   + +LG    D   +  P+ V+GL    +V    G  HCL
Sbjct: 3210 GAQFSLALTKSGVVWTWGKGDYFRLG-HGTDVHVRK-PQMVEGLRGKKIVHVAVGALHCL 3267

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  +        P  V+GL    + +   
Sbjct: 3268 AVT------------DTGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3313

Query: 123  GYSHCLVLTSSGVVT 137
            G SH +  T+  V T
Sbjct: 3314 GSSHSVAWTTVDVTT 3328



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 27/147 (18%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S+AL   G V+TWG   + +LG  S D   +  P++V+GL    V+    G  HC+  T 
Sbjct: 4208 SVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQVQGLQGKKVIAIATGSLHCVCCTE 4265

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGY 124
                         GEV+TWG +  GQLG    D  + +I  P+ V  L    + +   G 
Sbjct: 4266 D------------GEVYTWGDNDEGQLG----DGTTNAIQRPRLVAALQGKKINRVACGS 4309

Query: 125  SHCLVLTSSGVVTCTHKENGCGSDPSQ 151
            +H L  ++S       K    G  P+Q
Sbjct: 4310 AHTLAWSTS-------KPTNAGKLPAQ 4329


>gi|198415420|ref|XP_002129368.1| PREDICTED: similar to regulator of chromosome condensation (RCC1)
           and BTB (POZ) domain containing protein 1 [Ciona
           intestinalis]
          Length = 554

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 99/230 (43%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEV+TWG +  GQ+G  S    +Q  P++V          AC G     
Sbjct: 159 GSHHSMALTTEGEVYTWGYNNCGQIG--SGSTANQGSPRKVT---------ACIGNKR-- 205

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           ++  T G   SL + D GEV++WG + +GQLG+   +  +Q+ P RV  L  V + Q   
Sbjct: 206 IIDITCGQTTSLCVTDSGEVYSWGYNGNGQLGV--GNNVNQTNPCRVAALQGVVIAQVVC 263

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT +GVV                                      + WG N Y
Sbjct: 264 GYAHALALTDNGVV--------------------------------------FGWGANSY 285

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N   T T P +V + +   + L A   +HS         +Y +G
Sbjct: 286 GQLGSGNKANTCT-PLQVATRIGRVVCLAATHYSHSSAARNQSGHIYMWG 334


>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
          Length = 527

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 100/233 (42%), Gaps = 60/233 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGL--ASVSVVQACAGYSH 60
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     V+V  AC     
Sbjct: 136 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVAVNIAC----- 188

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                   G   S+A+ + GEV+ WG + +GQLGL S+   +Q  P R+  L  + V + 
Sbjct: 189 --------GQMCSMAVVNTGEVYVWGYNGNGQLGLGSSG--NQPTPCRIAALQGIRVQRV 238

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
             GY+H LVLT  G                                      ++Y WG N
Sbjct: 239 ACGYAHTLVLTDEG--------------------------------------QVYAWGAN 260

Query: 181 EYGQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
            YGQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 261 SYGQLGTGNKSNQSYPAPVIVEK--DRIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L+   +  AC  Y           
Sbjct: 39  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGKKI--ACLSY----------- 81

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE++TWG+N Y Q+G   +N  + 
Sbjct: 82  ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNHGLV 117

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  + ++  P+ + G
Sbjct: 118 PCHISTNLSNKQVTEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG 176


>gi|402869940|ref|XP_003899001.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Papio
           anubis]
          Length = 944

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 160/367 (43%), Gaps = 55/367 (14%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L     V + G ++ GQLG  SA +    +P+ ++ L +++V     G    
Sbjct: 30  SGERHSLLLLTNHRVLSCGDNSRGQLGRRSAPRG--ELPEPIQALETLNVDLVSCGKE-- 85

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                     HSLA+   G VF WG  + GQLG+    K+    P ++  L  + ++Q  
Sbjct: 86  ----------HSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPTKITTLNGIKIIQVS 134

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H L L+       ++K    G+  + GV      D HT +  L   G+++T+G+N 
Sbjct: 135 CGHYHSLALSK----VQSNKPLSIGALKNLGVIYISCGDEHTAV--LIQDGKVFTFGDNS 188

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
            GQ+G + +      PQ VE +  L ++ I CG+ H+     +  ++ +FG G +   D+
Sbjct: 189 SGQLGYSPTPEK-RGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFGHGPS---DT 243

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSG--GLVVKKIYSGGDHSIVTVTK-- 295
            K  H             P A+T   D   L+S      + VK I++G   + VT  +  
Sbjct: 244 SKPTH-------------PEALTENFDIRCLISAEDLVDVQVKHIFAGTYANFVTTHQDT 290

Query: 296 SSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGC 355
           SS          ++  +Q +   +  +K    E +  KS+          +  +F SP C
Sbjct: 291 SSTSAPGKTLPEISRISQSMAEKWIAVKRRSTECDVAKSE----------IRMIFSSPAC 340

Query: 356 MNGSFLQ 362
           +  SFL+
Sbjct: 341 LTASFLK 347



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 61/95 (64%), Gaps = 1/95 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   FL G LCGL+++N  + N+PFPLALYKK+LD+  
Sbjct: 657 YGMFMYPEMGSCMWFPAKPKLEKKRYFLFGMLCGLSLFNLNVANLPFPLALYKKLLDQKP 716

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L KSLQ++L+    D+ D   I F
Sbjct: 717 SLEDLKELSPRLGKSLQEVLNDDADDIGDALCIRF 751



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 19/155 (12%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLF-----LQTFNPHTLNQYLEVEVSRD 994
            ++PFIF++ +K  LL+ D  I+M   M++   Y+      LQ  +    +    + V R 
Sbjct: 546  DFPFIFNSLSKIKLLQADSCIKM--WMSEEKAYMLRHETILQKKDEFPPSPRFILRVRRS 603

Query: 995  NIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKE 1054
             +V+D +R+L+Q    DF+K L             V+F  E   ++GGV  EF   + +E
Sbjct: 604  RLVKDALRQLSQAEATDFRKVL------------VVEFIEEIRPESGGVSSEFFHCMFEE 651

Query: 1055 ILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +  P+YGMF   E    +WF      ++  YFL G
Sbjct: 652  MTKPEYGMFMYPEMGSCMWFPAKPKLEKKRYFLFG 686


>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 743

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 123/254 (48%), Gaps = 36/254 (14%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLA+   G V+TWG ++ GQLG     K  + +P RV+GL+ V              + 
Sbjct: 257 HSLAVRSDGTVWTWGANSFGQLG--DGTKSDRLVPVRVQGLSGV--------------VA 300

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           S  G +HSLAL   G V+ WG ++ GQLG +S+   S+S+P +V+GL+    V   AG S
Sbjct: 301 SDVGSYHSLALRSDGSVWAWGHNSSGQLGDDSS--TSRSVPVQVRGLSGGMAV--TAGSS 356

Query: 126 HCLVLTSSGVVTC------THKENGCGSDPSQGVQSNLVQDSHTTITSLN------SPGE 173
           H L + S G V          +  G  ++ +  VQ   +          N      S G 
Sbjct: 357 HSLAVGSDGTVWAWGSNFSGERGEGTTNNRASPVQVQGLGGGVAVAAGFNHSLAARSDGS 416

Query: 174 LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
           ++ WG+N+ GQ+G + +    T P +V+ L    +  +A G +HS  L +S   ++A+G 
Sbjct: 417 VWAWGSNDSGQLG-DGTTRNSTSPVQVQGLSG--VVAVAAGFDHSLAL-RSDGSVWAWGS 472

Query: 234 GSAVQLDSPKSVHK 247
            +  QL    + ++
Sbjct: 473 NAYGQLGEGTTTNR 486



 Score = 77.4 bits (189), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 140/313 (44%), Gaps = 67/313 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLA    G V+ WG +  GQLG      ++ + P +V+GL+ V  V   AG+ H L L 
Sbjct: 407 HSLAARSDGSVWAWGSNDSGQLG--DGTTRNSTSPVQVQGLSGV--VAVAAGFDHSLALR 462

Query: 66  STTGLW------------------------------------HSLALNDCGEVFTWGGDT 89
           S   +W                                    HSLA+   G V+TWG + 
Sbjct: 463 SDGSVWAWGSNAYGQLGEGTTTNRLVPVQVLSGVVAVAAGSNHSLAVRSDGTVWTWGSNL 522

Query: 90  HGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV----TCTHKENGC 145
           +GQLG       ++ +P +V+GL+ V+ V   AG  H L + S G V    + +  E G 
Sbjct: 523 YGQLG--DGTTSNRLVPVQVQGLSGVAAV--AAGSFHSLAVHSDGSVWAWGSNSSGELGD 578

Query: 146 GSDPSQ-------GVQSNLVQDS---HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
           G+  ++       G+   +   +   H+ +  + S G ++TWG+N +G++G + + T+ +
Sbjct: 579 GTTSNRLVPGRVPGLSGGVAVAAGGFHSLV--VRSDGTVWTWGSNSFGELG-DGTTTSRS 635

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL-DSPKSVHKTPQLIHG 254
            P +V+ L    +  +  G +HS  + +S   ++ +G  S  QL D   +    P  +  
Sbjct: 636 VPVQVQGLSG--VVAVDAGNSHSLAV-RSDGTVWTWGYNSYGQLGDGTTTRRSVPVQV-- 690

Query: 255 PWIASPVAMTAGE 267
           P ++  VAM  G 
Sbjct: 691 PGLSGVVAMATGA 703



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 136/316 (43%), Gaps = 69/316 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +SLA+   G V+ WG +  GQLG       ++ +P +V GL+ V  V   AG SH L + 
Sbjct: 157 YSLAVRSDGTVWAWGSNFSGQLG--DGTTSNRLVPVQVPGLSGV--VSVAAGSSHSLAVL 212

Query: 66  STTGLW--------------------------------------HSLALNDCGEVFTWGG 87
           S   +W                                      HSLA+   G V+TWG 
Sbjct: 213 SDGSVWAWGANSSGQLGDGTKINRLVPVQVPGLSGVVAVAAGAAHSLAVRSDGTVWTWGA 272

Query: 88  DTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV-TCTHKENGCG 146
           ++ GQLG     K  + +P RV+GL+   VV +  G  H L L S G V    H  +G  
Sbjct: 273 NSFGQLG--DGTKSDRLVPVRVQGLS--GVVASDVGSYHSLALRSDGSVWAWGHNSSGQL 328

Query: 147 SDPSQGVQSNLVQ-------------DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            D S   +S  VQ              SH+   ++ S G ++ WG+N  G+ G   +N  
Sbjct: 329 GDDSSTSRSVPVQVRGLSGGMAVTAGSSHS--LAVGSDGTVWAWGSNFSGERGEGTTNNR 386

Query: 194 VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKT-PQLI 252
            + P +V+ L       +A G NHS   ++S   ++A+G   + QL    + + T P  +
Sbjct: 387 AS-PVQVQGLGGG--VAVAAGFNHSLA-ARSDGSVWAWGSNDSGQLGDGTTRNSTSPVQV 442

Query: 253 HGPWIASPVAMTAGED 268
            G  ++  VA+ AG D
Sbjct: 443 QG--LSGVVAVAAGFD 456



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 94/195 (48%), Gaps = 36/195 (18%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLA++  G V+ WG ++ G+LG       ++ +P RV GL S  V  A  G+       
Sbjct: 555 HSLAVHSDGSVWAWGSNSSGELG--DGTTSNRLVPGRVPGL-SGGVAVAAGGF------- 604

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 HSL +   G V+TWG ++ G+LG       S+S+P +V+GL+ V  V A  G S
Sbjct: 605 ------HSLVVRSDGTVWTWGSNSFGELG--DGTTTSRSVPVQVQGLSGVVAVDA--GNS 654

Query: 126 HCLVLTSSGVVTC----THKENGCG-----SDPSQ-----GVQSNLVQDSHTTITSLNSP 171
           H L + S G V      ++ + G G     S P Q     GV +      H  +  + S 
Sbjct: 655 HSLAVRSDGTVWTWGYNSYGQLGDGTTTRRSVPVQVPGLSGVVAMATGALHPLV--VRSD 712

Query: 172 GELYTWGNNEYGQMG 186
           G ++ WG N +GQ+G
Sbjct: 713 GTVWAWGYNSFGQLG 727



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 88/195 (45%), Gaps = 36/195 (18%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +SLAL   G V+  G +  GQLG       + S P +V GL+ V  V   AG SH     
Sbjct: 57  YSLALRPDGTVWATGSNDLGQLG--DGTTTNHSAPVQVPGLSGV--VAVAAGSSH----- 107

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLA+   G V+ WG ++ GQLG  +   +    P RV+GL+   VV   AG S
Sbjct: 108 -------SLAVRHDGTVWAWGSNSDGQLGDGTTTMR--LTPVRVQGLS--GVVSVAAGSS 156

Query: 126 HCLVLTSSGVVTCTHKE------NGCGSD---PSQ-----GVQSNLVQDSHTTITSLNSP 171
           + L + S G V            +G  S+   P Q     GV S     SH+   ++ S 
Sbjct: 157 YSLAVRSDGTVWAWGSNFSGQLGDGTTSNRLVPVQVPGLSGVVSVAAGSSHS--LAVLSD 214

Query: 172 GELYTWGNNEYGQMG 186
           G ++ WG N  GQ+G
Sbjct: 215 GSVWAWGANSSGQLG 229


>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Ailuropoda melanoleuca]
          Length = 551

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 100/233 (42%), Gaps = 60/233 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGL--ASVSVVQACAGYSH 60
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     V+V  AC     
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVAVNIAC----- 212

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                   G   S+A+ + GEV+ WG + +GQLGL S+   +Q  P R+  L  + V + 
Sbjct: 213 --------GQMCSMAVVNTGEVYVWGYNGNGQLGLGSSG--NQPTPCRIAALQGIRVQRV 262

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
             GY+H LVLT  G                                      ++Y WG N
Sbjct: 263 ACGYAHTLVLTDEG--------------------------------------QVYAWGAN 284

Query: 181 EYGQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
            YGQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 285 SYGQLGTGNKSNQSYPAPVIVEK--DRIIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 50.1 bits (118), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 43/180 (23%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  E+F  G +  G LGL   D +S   P+R+  L+   +  AC  Y           
Sbjct: 63  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGKKI--ACLSY----------- 105

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE++TWG+N Y Q+G   +N  + 
Sbjct: 106 ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNHGLV 141

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  + ++  P+ + G
Sbjct: 142 PCHISTNLSNKQVTEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTG 200


>gi|403340452|gb|EJY69511.1| HECT E3 ubiquitin ligase, putative [Oxytricha trifallax]
          Length = 837

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 93/198 (46%), Gaps = 25/198 (12%)

Query: 901  KVAYTAFYMPDLATVCDIRIDYFRWISGR--------PNGSTRDF-LCNYPFIFDAKAKT 951
            KV Y  FY   +     ++     WI  R        P    R F +CN+P+I D+  K+
Sbjct: 395  KVNYKEFYNDAVNKEISLKDHIIMWIQEREKFRQNRQPYDRHRVFTICNFPWILDSANKS 454

Query: 952  TLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTND 1011
             +L++  +I  E    + N    L+   P   + YL +EV R+NI+EDT+ ++     N 
Sbjct: 455  EMLKIQNKINQEQQQRE-NIMDLLRI--PGMASLYLIIEVRRENILEDTLNKIVNPGLN- 510

Query: 1012 FKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRS 1071
            FKKPL++             F GE   D GGVR+EF  LL K + DP Y MF   E  R 
Sbjct: 511  FKKPLRI------------MFTGEPGIDEGGVRKEFFQLLNKSLFDPNYAMFNYNENERL 558

Query: 1072 IWFSEDTFEDQNMYFLIG 1089
             WF+  + E    + L+G
Sbjct: 559  YWFNGHSMEANVNFELVG 576



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 3/98 (3%)

Query: 719 HYGITEYEET-RSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
           +Y +  Y E  R  WF+  + E      L+G L GLAIYN  I+++PFP+A YK++L + 
Sbjct: 546 NYAMFNYNENERLYWFNGHSMEANVNFELVGILMGLAIYNNVILDLPFPMAAYKQLLFQD 605

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPD--LEDVFGITF 813
           I   DLK+  P +A+S   IL+Y +P+  LE+  G+ F
Sbjct: 606 ITFDDLKEWQPEIAQSFDFILNYNDPNLSLEEALGLNF 643


>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
           magnipapillata]
          Length = 896

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 48/296 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H++AL + G V++WG + +GQLG+   D +++  P  +  ++S  +V    G  H L
Sbjct: 505 GEFHTIALCEEG-VYSWGSNEYGQLGV--GDTRTRYRPVLITHISSKQIVSVVCGAYHTL 561

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +TS              +V++WG   HGQLGL+S +  +Q  PK++  L S  V+QA A
Sbjct: 562 AITSDY------------KVYSWGWGVHGQLGLKSVE--NQLTPKQIDLLDSHKVIQAAA 607

Query: 123 GYSHCLVLTSSGVVTC----THKENGCGSDPSQGVQS---NLVQDSHTTIT-------SL 168
           GY+H  VLTS   V       + + G GS   Q +     +L  DS   I+       ++
Sbjct: 608 GYAHSAVLTSQRYVYTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFETIAI 667

Query: 169 NSPGELYTWGNN-------------EYGQMGINNSNTTVTK--PQRVESLVNLPIALIAC 213
           +    ++ WG N             +YG+   +N+     +  P+ ++  +  PI  I C
Sbjct: 668 SEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHPITQIFC 727

Query: 214 GANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKT-PQLIHGPWIASPVAMTAGED 268
           G  H  +L+ SV+++Y +G     QL     + ++ P+L+      + + +  G +
Sbjct: 728 GNWHYIILT-SVNQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAIIGVAVGAE 782



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 58/265 (21%), Positives = 100/265 (37%), Gaps = 53/265 (20%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS  L     V+T+G D +GQLG+ S  K  Q IP+ V  L   S+          
Sbjct: 607 AGYAHSAVLTSQRYVYTFGADLYGQLGIGSHYK--QVIPQLVDSLTLDSIYLI------- 657

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHG--------------QLGLESADKKSQSIPK 107
                + G + ++A+++   +F WG + H               ++   + D   +  P+
Sbjct: 658 -----SCGPFETIAISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPE 712

Query: 108 RVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITS 167
            ++      + Q   G  H ++LTS   V  T   N CG     G  + + Q +   + +
Sbjct: 713 TLQFQLQHPITQIFCGNWHYIILTSVNQVY-TWGYNDCGQ---LGHYNKIDQSAPRLVKA 768

Query: 168 L------------------NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIA 209
           L                  ++   +  WG N+ G++GI N           +S+  +   
Sbjct: 769 LIRRAIIGVAVGAEFSVAFDADDNIMAWGRNDEGKIGIENEGNLGNSSSARQSIYCVLAP 828

Query: 210 LIACG---ANHSFVLSKSVSRLYAF 231
            +  G    + SF  SKS  + Y F
Sbjct: 829 TLVHGLPSIDDSFNSSKSSMKDYVF 853


>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
 gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
          Length = 4625

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 111/235 (47%), Gaps = 33/235 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D K+  IPK+VK L    V+    G     
Sbjct: 3016 GSSHSAAVTADGELYTWGLGDYGRLG--HGDSKTLHIPKQVKALQDYKVIDIACGSRDA- 3072

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D   V++WG    G+LG      +  +IP+++  L    V +   
Sbjct: 3073 ---------QTLALTDNNCVWSWGDGDFGKLG--RGGSEGCNIPQKIDALCGRDVCRIAC 3121

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDPS----QGVQSNLVQDSHTTIT-------S 167
            G    L L+++G V    K +    G G+D      Q ++  L +   T I        +
Sbjct: 3122 GAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHYRSPQLIEGPLKKKRITEIAVGALHCLA 3181

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRV--ESLVNLPIALIACGANHSFV 220
            +   GE+Y+WG+N++GQ G  N NTTV K  ++    L  + I+ IACG++HS  
Sbjct: 3182 VTDTGEVYSWGDNDHGQQG--NGNTTVNKRPQICLGELDGVKISHIACGSSHSIA 3234



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 110/254 (43%), Gaps = 55/254 (21%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HSL +   G+VF+WG    G+LG    D  S+  P  ++ L S  +V+   G SH  
Sbjct: 2964 GGRHSLCITREGKVFSWGEGIDGKLG--HGDVTSRLSPTLIEALESKLIVEIACGSSHSA 3021

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T+             GE++TWG   +G+LG    D K+  IPK+VK L    V+    
Sbjct: 3022 AVTAD------------GELYTWGLGDYGRLG--HGDSKTLHIPKQVKALQDYKVIDIAC 3067

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
            G        S    T    +N C                            +++WG+ ++
Sbjct: 3068 G--------SRDAQTLALTDNNC----------------------------VWSWGDGDF 3091

Query: 183  GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
            G++G   S      PQ++++L    +  IACGA  S  LS +  +++ +G G   +L   
Sbjct: 3092 GKLGRGGSEG-CNIPQKIDALCGRDVCRIACGAQFSLALS-TTGKVWTWGKGDYYRLGHG 3149

Query: 243  KSVH-KTPQLIHGP 255
               H ++PQLI GP
Sbjct: 3150 NDSHYRSPQLIEGP 3163



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 105/245 (42%), Gaps = 54/245 (22%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++ L    EVF+WG    G+LG    DK S   P++++ L    +V    G SH 
Sbjct: 3864 SGGRHAMVLTSNFEVFSWGDGEDGKLG--HGDKLSSETPRKIEALLGKQIVHISCGSSHS 3921

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS             GE++TWG   +G+LG    D   +  PK ++ L S  V+   
Sbjct: 3922 AAITSK------------GELYTWGKGRYGRLGHGDGDDCLK--PKLLEALKSYKVIDV- 3966

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
                                   CGS  +Q +             ++     +++WG+ +
Sbjct: 3967 ----------------------ACGSGDAQTL-------------AITDDDCVWSWGDGD 3991

Query: 182  YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
            YG++G   S+    KP R+ESL+ + +  + CG+  S  L+K+   LY +G G   +L  
Sbjct: 3992 YGKLGRGGSD-GCKKPLRIESLIGMAVCKVECGSQFSVALTKN-GDLYTWGKGDYYRLGH 4049

Query: 242  PKSVH 246
              + H
Sbjct: 4050 GTNDH 4054



 Score = 83.2 bits (204), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 29/234 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D   +  PK ++ L S  V+    G     
Sbjct: 3917 GSSHSAAITSKGELYTWGKGRYGRLGHGDGDDCLK--PKLLEALKSYKVIDVACG----- 3969

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +LA+ D   V++WG   +G+LG   +D   +  P R++ L  ++V +   
Sbjct: 3970 -----SGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKK--PLRIESLIGMAVCKVEC 4022

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSL 168
            G    + LT +G +    K +    G G++            QG Q   V        + 
Sbjct: 4023 GSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRRPRKVACLQGKQIVTVAAGSLHCVAC 4082

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               GE++TWG+N+ GQ+G N +   + +P  V  L N+ +  + CG+ HSF  S
Sbjct: 4083 TDAGEVFTWGDNDEGQLG-NGTLNPIPEPTLVTVLENVKLNRVGCGSAHSFAWS 4135



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 108/252 (42%), Gaps = 59/252 (23%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL+  G V++WG    G+LG     ++    P+ VK L +  + Q   G ++   +T
Sbjct: 524 HYLALSSDGCVYSWGSGDGGRLGHGDIRRE----PELVKELVNKKITQIACGSTYSAAVT 579

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           S             GE++TWG  ++G+LG    + + + +P  V GL+   VV       
Sbjct: 580 SN------------GELYTWGRGSYGRLG--HGNSEDRLLPTLVAGLSGSHVVDV----- 620

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CGS            D+HT   +++  G +++WG+ +YG++
Sbjct: 621 ------------------ACGSG-----------DAHTL--AIDKDGIVWSWGDGDYGKL 649

Query: 186 GINNSNTTVTKPQRVESLV--NLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPK 243
           G   S+     P+ VE+L   N  I  + CG+  S  L K    ++ +G     +L    
Sbjct: 650 GRGGSDCCKV-PKVVETLKHHNKYIVNVLCGSQFSVALGKD-GTVWTWGKSDGYRLGHGT 707

Query: 244 SVH-KTPQLIHG 254
             H + P+++ G
Sbjct: 708 LDHVRYPKMVEG 719



 Score = 61.6 bits (148), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 54/236 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG  ++G+LG    + + + +P  V GL+   VV    G     
Sbjct: 571 GSTYSAAVTSNGELYTWGRGSYGRLG--HGNSEDRLLPTLVAGLSGSHVVDVACG----- 623

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G  H+LA++  G V++WG   +G+LG   +D     +PK         VV+   
Sbjct: 624 -----SGDAHTLAIDKDGIVWSWGDGDYGKLGRGGSD--CCKVPK---------VVETLK 667

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
            ++  +V     V+        CGS  S                +L   G ++TWG ++ 
Sbjct: 668 HHNKYIV----NVL--------CGSQFS---------------VALGKDGTVWTWGKSDG 700

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
            ++G + +   V  P+ VE L+N  I  IA G +H   L+ +      F  GS VQ
Sbjct: 701 YRLG-HGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLALTDNCQ---IFTWGSDVQ 752



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 41/159 (25%)

Query: 64   LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG 123
            L+  +G  H++ L    EVF+WG    G+LG    DK S   P++++ L    +V    G
Sbjct: 3860 LSVHSGGRHAMVLTSNFEVFSWGDGEDGKLG--HGDKLSSETPRKIEALLGKQIVHISCG 3917

Query: 124  YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
             SH   +TS G                                      ELYTWG   YG
Sbjct: 3918 SSHSAAITSKG--------------------------------------ELYTWGKGRYG 3939

Query: 184  QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ++G  + +  + KP+ +E+L +  +  +ACG+  +  L+
Sbjct: 3940 RLGHGDGDDCL-KPKLLEALKSYKVIDVACGSGDAQTLA 3977



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 14/132 (10%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  H+LA++  G V++WG   +G+LG   +D     +PK V+ L           + + 
Sbjct: 624 SGDAHTLAIDKDGIVWSWGDGDYGKLGRGGSD--CCKVPKVVETLK----------HHNK 671

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
            ++    G   S+AL   G V+TWG     +LG  + D      PK V+GL +  +V   
Sbjct: 672 YIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDH--VRYPKMVEGLINYHIVDIA 729

Query: 122 AGYSHCLVLTSS 133
            G SHCL LT +
Sbjct: 730 VGPSHCLALTDN 741



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 16/137 (11%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S+AL   G+++TWG   + +LG  + D   +  P++V  L    +V   AG  HC+  T 
Sbjct: 4027 SVALTKNGDLYTWGKGDYYRLGHGTNDHVRR--PRKVACLQGKQIVTVAAGSLHCVACT- 4083

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
                       D GEVFTWG +  GQLG  + +   +  P  V  L +V + +   G +H
Sbjct: 4084 -----------DAGEVFTWGDNDEGQLGNGTLNPIPE--PTLVTVLENVKLNRVGCGSAH 4130

Query: 127  CLVLTSSGVVTCTHKEN 143
                ++   +   +  N
Sbjct: 4131 SFAWSTEAPIDIGYMPN 4147



 Score = 45.8 bits (107), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 14/90 (15%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           + G   S+AL   G V+TWG     +LG  + D      PK V+GL +  +V    G SH
Sbjct: 677 LCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDH--VRYPKMVEGLINYHIVDIAVGPSH 734

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTH 90
           CL LT            D  ++FTWG D  
Sbjct: 735 CLALT------------DNCQIFTWGSDVQ 752


>gi|115390877|ref|XP_001212943.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114193867|gb|EAU35567.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 1183

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 24/177 (13%)

Query: 917  DIRIDYFRWISGRPNGSTRDF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFL 975
            D+  D+  W S      T  F  C YPF     AK  ++E D R QME    +  F   L
Sbjct: 750  DLVADFEAWES-----RTAKFSFCQYPFFLSIWAKIRIMEHDARRQMEVKAREAFFNSIL 804

Query: 976  QTFNPHTLNQYLEVEVSRDNIVEDTIR---ELAQYTTNDFKKPLKVNDTSPIYLAPQVKF 1032
                   ++QYL ++V RD +VED++R   E+   +  + KK L++            +F
Sbjct: 805  SR---KAVSQYLVLKVRRDCLVEDSLRGVSEVVGSSQEEIKKGLRI------------EF 849

Query: 1033 RGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             GEE  DAGG+R+E+ +LL++E+ DP++G+F   E+++  +F+   FE    +FL+G
Sbjct: 850  VGEEGIDAGGLRKEWFLLLVREVFDPEHGLFIYDEDSQFCYFNPYCFESSEQFFLVG 906



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 17/104 (16%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL--------DEP 777
           E+++  +F+   FE     FL+G L GLAIYN TI+++  P   +KK+L         +P
Sbjct: 884 EDSQFCYFNPYCFESSEQFFLVGVLLGLAIYNSTILDIALPPFAFKKLLAAAPPTTGPQP 943

Query: 778 IL--------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                     L DL +  P LAK L+ +L++ E D+ + F   F
Sbjct: 944 STTRSPFKCSLDDLAEYRPALAKGLRALLEF-EGDVAETFCYDF 986


>gi|221113828|ref|XP_002154529.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
           [Hydra magnipapillata]
          Length = 364

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 111/251 (44%), Gaps = 63/251 (25%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LA+ D GE+++WG   +GQLG  S +K    +    K +  V    AC  Y       
Sbjct: 86  HVLAVTDSGELYSWGHGGYGQLGHTSEEKSKPVLVYMQKKVIQV----ACGSY------- 134

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 HS+AL + GEV+ WG +  GQLGL  ++  +Q+ PKRV  + S  +V    G S
Sbjct: 135 ------HSIALTEDGEVYAWGSNNCGQLGLGISN--NQATPKRVSLIPSKKIVSVSCGQS 186

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
             ++LT+ G                                      ELY+WG N  GQ+
Sbjct: 187 FTVMLTTDG--------------------------------------ELYSWGYNGNGQL 208

Query: 186 GINNSNTTVTKPQRVE-SLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           GI N NT   +P RV  SL    I  I CG  H  VL+  +  LY++G  S  QL    +
Sbjct: 209 GIEN-NTNQLQPVRVTGSLFGKFIEKIVCGMAHVLVLTD-IGELYSWGANSYGQL-GLGT 265

Query: 245 VHKT--PQLIH 253
            H T  P LI+
Sbjct: 266 THNTSVPTLIN 276



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 115/247 (46%), Gaps = 61/247 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HS+AL + GEV+ WG +  GQLGL  ++  +Q+ PKRV  + S  +V    G S  +
Sbjct: 132 GSYHSIALTEDGEVYAWGSNNCGQLGLGISN--NQATPKRVSLIPSKKIVSVSCGQSFTV 189

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQAC 121
           +LT+             GE+++WG + +GQLG+E+   + Q  P RV G L    + +  
Sbjct: 190 MLTTD------------GELYSWGYNGNGQLGIENNTNQLQ--PVRVTGSLFGKFIEKIV 235

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G +H LVLT                                        GELY+WG N 
Sbjct: 236 CGMAHVLVLT--------------------------------------DIGELYSWGANS 257

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS---RLYAFGIGSAVQ 238
           YGQ+G+  ++ T + P  + +  +   + IA  A+H   +S  V+   ++Y +G    + 
Sbjct: 258 YGQLGLGTTHNT-SVPTLINTTTDDRWSDIA--AHHYNHISAGVTISGKIYMWGHCHGLT 314

Query: 239 LDSPKSV 245
           + SP+ V
Sbjct: 315 ILSPREV 321


>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC2-like [Xenopus (Silurana) tropicalis]
          Length = 4845

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 105/237 (44%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   GE++TWG   +G+LG    D + Q  PK V+ L    V+    G    
Sbjct: 4111 AGGAHSACITAAGELYTWGKGRYGRLG--HGDSEDQLKPKLVEALQGYRVIDIACG---- 4164

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  V V +  
Sbjct: 4165 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGVGVTKVE 4216

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4217 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4276

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    I  +ACG+ H+   S S
Sbjct: 4277 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKINRVACGSAHTLAWSTS 4332



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 35/268 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H LAL+  GEV++WG    G+LG    ++     P+ ++ L    VV   AG +H 
Sbjct: 4059 SGGKHCLALSSEGEVYSWGEAEDGKLG--HGNRSPCDRPRVIESLRGTEVVDIAAGGAHS 4116

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-A 120
              +T+             GE++TWG   +G+LG    D + Q  PK V+ L    V+  A
Sbjct: 4117 ACITAA------------GELYTWGKGRYGRLG--HGDSEDQLKPKLVEALQGYRVIDIA 4162

Query: 121  C-AGYSHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQDSHTTI------------ 165
            C +G +  L LT    V      +    G   S G +  +  DS T +            
Sbjct: 4163 CGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVTKVECGSQFS 4222

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G +YTWG  +Y ++G + S+  V +P++V+ L    +  IA G+ H    ++  
Sbjct: 4223 VALTKSGAVYTWGKGDYHRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTED- 4280

Query: 226  SRLYAFGIGSAVQL-DSPKSVHKTPQLI 252
              +Y +G     QL D   +  + P+L+
Sbjct: 4281 GEVYTWGDNDEGQLGDGTTNAIQRPRLV 4308



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 100/239 (41%), Gaps = 36/239 (15%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3167

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L   +V Q   
Sbjct: 3168 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQAVCQIEC 3216

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDP-------------SQGVQSNLVQDSHTT----- 164
            G    L LT SGVV        C +                  V+  L+     T     
Sbjct: 3217 GAQFSLALTKSGVVWTWXXTKHCLAVXFYYXNYLLELFLIKVSVRFVLLGQYLXTCATYF 3276

Query: 165  ---ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               I  +    ++Y WG+N++GQ G N + T   KP  V  L    I  +ACG++HS  
Sbjct: 3277 KLNIIKIVISKKVYAWGDNDHGQQG-NGTTTVNRKPTLVHGLEGQKITRVACGSSHSVA 3334



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 113/250 (45%), Gaps = 51/250 (20%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL+   E+F+WG    G+LG    D  S   PK V  L+     +         V+ 
Sbjct: 506 HYLALSATSELFSWGCGDGGRLG--HGDTVSLEEPKLVSALSGKQTGKQ--------VIH 555

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  +S A+   GE++TWG   +G+LG  S++   Q++P  V GL  + VV       
Sbjct: 556 IACGSTYSAAITADGELYTWGRGNYGRLGHGSSE--DQTVPMLVTGLKGLKVVDV----- 608

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CGS  +Q +             S+   G++++WG+ +YG++
Sbjct: 609 ------------------SCGSGDAQTL-------------SVTENGQVWSWGDGDYGKL 637

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
           G   S+   T P+ +E L +L I  + CG+  S  ++K   ++Y++G G   +L      
Sbjct: 638 GRGGSDGCKT-PKLIEKLQDLDIVKVRCGSQFSIAITKD-GQVYSWGKGDNQRLGHGTEE 695

Query: 246 H-KTPQLIHG 254
           H + P++++G
Sbjct: 696 HVRYPKIMNG 705



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 105/234 (44%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   Q++P  V GL  + VV    G     
Sbjct: 559 GSTYSAAITADGELYTWGRGNYGRLGHGSSE--DQTVPMLVTGLKGLKVVDVSCG----- 611

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +L++ + G+V++WG   +G+LG   +D      PK ++ L  + +V+   
Sbjct: 612 -----SGDAQTLSVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDIVKVRC 664

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + +T  G V    K +    G G++          G+Q   V D     T   +L
Sbjct: 665 GSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLAL 724

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
              GE+Y+WG+N+  Q   +        P  +  L +  I  I+CG   SF  S
Sbjct: 725 TESGEVYSWGSNDQCQH-FDTLRIAKPVPSVLPGLDSKHIVGISCGPAQSFAWS 777



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 53/223 (23%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3058 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3115

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3116 AAITSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQV- 3160

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
                                   CGS  +Q +             +L   G +++WG+ +
Sbjct: 3161 ----------------------ACGSRDAQTL-------------ALTDEGLVFSWGDGD 3185

Query: 182  YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
            +G++G   S      PQ +E L    +  I CGA  S  L+KS
Sbjct: 3186 FGKLGRGGSEG-CNIPQNIERLNGQAVCQIECGAQFSLALTKS 3227



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 128/323 (39%), Gaps = 73/323 (22%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3958 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4014

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 4015 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4074

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
            +WG    G+LG    ++     P+ ++ L    VV   AG +H   +T++G +    K  
Sbjct: 4075 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGR 4132

Query: 144  ----GCGSDPSQGVQSNLVQ---------------DSHTTITSLNSPGELYTWGNNEYGQ 184
                G G    Q ++  LV+               D+ T    L     +++WG+ +YG+
Sbjct: 4133 YGRLGHGDSEDQ-LKPKLVEALQGYRVIDIACGSGDAQTLC--LTDDDTVWSWGDGDYGK 4189

Query: 185  MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
            +G   S+     P +++SL  + +  + CG+  S  L+KS   +Y +G G   +L     
Sbjct: 4190 LGRGGSDGCKV-PMKIDSLTGVGVTKVECGSQFSVALTKS-GAVYTWGKGDYHRLGHGSD 4247

Query: 245  VH-KTPQLIHGPWIASPVAMTAG 266
             H + P+ + G      +A+  G
Sbjct: 4248 DHVRRPRQVQGLQGKKVIAIATG 4270



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 99/228 (43%), Gaps = 40/228 (17%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T+        
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTAE------- 3014

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L++  V  V   +G  H   LT 
Sbjct: 3015 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTV 3068

Query: 133  SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN------------------SPGEL 174
             G V       G G D   G  S +  D    I +L                   S GEL
Sbjct: 3069 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3124

Query: 175  YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            YTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3125 YTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 102/236 (43%), Gaps = 36/236 (15%)

Query: 81   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCT 139
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T+ G V  C 
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACG 3021

Query: 140  HKENG-CGSDPSQG---------------VQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
               NG  G   S G               V+   V       T+L   G++++WG  + G
Sbjct: 3022 EATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDG 3081

Query: 184  QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD--- 240
            ++G + S     KP+ +E+L    I  IACG++HS  ++ S   LY +G+G   +L    
Sbjct: 3082 KLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS-GELYTWGLGEYGRLGHGD 3139

Query: 241  -----SPKSV-----HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
                  PK V     H+  Q+  G   A  +A+T  ++ LV   G     K+  GG
Sbjct: 3140 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT--DEGLVFSWGDGDFGKLGRGG 3193



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 27/147 (18%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S+AL   G V+TWG   + +LG  S D   +  P++V+GL    V+    G  HC+  T 
Sbjct: 4222 SVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQVQGLQGKKVIAIATGSLHCVCCTE 4279

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGY 124
                         GEV+TWG +  GQLG    D  + +I  P+ V  L    + +   G 
Sbjct: 4280 D------------GEVYTWGDNDEGQLG----DGTTNAIQRPRLVAALQGKKINRVACGS 4323

Query: 125  SHCLVLTSSGVVTCTHKENGCGSDPSQ 151
            +H L  ++S       K    G  PSQ
Sbjct: 4324 AHTLAWSTS-------KPANAGKLPSQ 4343



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 92/216 (42%), Gaps = 49/216 (22%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+  A               H LAL+   E+F+WG    G+LG    D
Sbjct: 484 PQLVQGLASRNIVKIAAHPDG----------QHYLALSATSELFSWGCGDGGRLG--HGD 531

Query: 100 KKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQ 159
             S   PK V  L+                 T   V+        CGS            
Sbjct: 532 TVSLEEPKLVSALSGKQ--------------TGKQVIHI-----ACGS------------ 560

Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
              T   ++ + GELYTWG   YG++G + S+   T P  V  L  L +  ++CG+  + 
Sbjct: 561 ---TYSAAITADGELYTWGRGNYGRLG-HGSSEDQTVPMLVTGLKGLKVVDVSCGSGDAQ 616

Query: 220 VLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
            LS + + +++++G G   +L    S   KTP+LI 
Sbjct: 617 TLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 652


>gi|432930911|ref|XP_004081521.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Oryzias
           latipes]
          Length = 531

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 100/230 (43%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL D GEV+ WG +  GQ+G  S    +Q  P+RV       V          +
Sbjct: 136 GSHHSMALTDSGEVYAWGYNNCGQVG--SGSTANQPTPRRVSSCLQNKVAVG-------I 186

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V   T+    SLA+ D GEV+ WG + +GQLGL   +  +Q  P R+  L  + V+Q   
Sbjct: 187 VCGQTS----SLAVVDNGEVYGWGYNGNGQLGL--GNNGNQLTPCRLVALQGLCVLQIVC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+HCL L+  GV                                      LY WG+N Y
Sbjct: 241 GYAHCLALSDEGV--------------------------------------LYAWGSNTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N +  ++ P ++ S     + + AC + H+        ++Y +G
Sbjct: 263 GQLGTGNKSNQLS-PVQIMSEKERIVEVAACHSTHTSAAKTQSGQVYMWG 311



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 116/285 (40%), Gaps = 70/285 (24%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L   + GE+F WG + + QLG  + ++    +      L    V  AC  +       
Sbjct: 86  HVLMATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANMLNKKVVEVACGSH------- 138

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 HS+AL D GEV+ WG +  GQ+G  S    +Q  P+RV               S
Sbjct: 139 ------HSMALTDSGEVYAWGYNNCGQVG--SGSTANQPTPRRV---------------S 175

Query: 126 HCLV-LTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
            CL    + G+V        CG   S  V  N               GE+Y WG N  GQ
Sbjct: 176 SCLQNKVAVGIV--------CGQTSSLAVVDN---------------GEVYGWGYNGNGQ 212

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G+ N+   +T P R+ +L  L +  I CG  H   LS     LYA+G  +  QL +   
Sbjct: 213 LGLGNNGNQLT-PCRLVALQGLCVLQIVCGYAHCLALSDE-GVLYAWGSNTYGQLGTG-- 268

Query: 245 VHKTPQLIHGPWIASPVAMTAGEDSLVS----HSGGLVVKKIYSG 285
            +K+ QL       SPV + + ++ +V     HS      K  SG
Sbjct: 269 -NKSNQL-------SPVQIMSEKERIVEVAACHSTHTSAAKTQSG 305


>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
          Length = 4837

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 111/237 (46%), Gaps = 35/237 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +Q  PK V  L    VVQ   G     
Sbjct: 3039 GSSHSAAITSSGELYTWGLGEYGRLG--HGDNCTQLKPKLVTTLQGHRVVQVACGSRDA- 3095

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +L L + G VF+WG    G+LG      +  S+P +V+ L SV V+Q   
Sbjct: 3096 ---------QTLCLTEEGLVFSWGDGDFGKLG--RGGSEGCSVPHQVERLNSVGVMQIEC 3144

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-------PSQGVQSNLVQDSHTTITSLN-- 169
            G    L LT SG V    K +    G G+D       P QG++   V   H  + +L+  
Sbjct: 3145 GAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKV--IHVAVGALHCL 3202

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVT-KPQRVESLVNLPIALIACGANHSFVLS 222
                 G++Y WG+N++GQ G  + NT V  KP  V  L  + +  +ACG++HS   S
Sbjct: 3203 AVTDSGQVYAWGDNDHGQQG--SGNTVVNKKPNLVLGLDGVFVNRVACGSSHSVAWS 3257



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 121/269 (44%), Gaps = 34/269 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H + L+   EV++WG    G+LG    D  S+  P  + GL      Q C  Y       
Sbjct: 579 HVMVLSSANEVWSWGAGDGGRLG--HGDTVSKEHPTMIVGLHE---KQVCGIY------- 626

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC--AG 123
              G  +S A+   GE+FTWG  T+G+LG  ++D K   +P +V+ L S  VV     +G
Sbjct: 627 --CGASYSAAITIAGELFTWGRGTYGRLGHGNSDDK--LVPTQVQALKSYKVVDVALGSG 682

Query: 124 YSHCLVLTSSGVVTC------THKENG-CGSDPSQGVQSNLVQDSHTTITS-----LNSP 171
            +H + +T +G++            NG C   P       LV  S     S     L+  
Sbjct: 683 DAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGSPIPVQIDTLVNVSRIYSGSQFSVALSCD 742

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G LYTWG    G++G  NS  +   P+ V +L    IA +A G+ H   L+ S   LY +
Sbjct: 743 GTLYTWGKGHGGRLGHGNSEHS-NVPKLVRALEGKKIADVAVGSAHCLALTSS-GELYGW 800

Query: 232 GIGSAVQLDSPKSVHKTPQLIHGPWIASP 260
           G     Q+  P  V + P +IH P + +P
Sbjct: 801 GRNDYQQI-CPSGVSRDP-IIHSPILTTP 827



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 117/277 (42%), Gaps = 61/277 (22%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H LAL+  GEVF+WG    G+LG    ++ S   PK ++ L+ + V+    G +H 
Sbjct: 4031 SGGKHCLALSSDGEVFSWGEGEDGKLG--HGNRDSYDRPKLIEALSGIGVIDIACGSAHS 4088

Query: 62   LVLTST------------------------------------------TGLWHSLALNDC 79
              +TS                                           +G   +L + D 
Sbjct: 4089 ACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDD 4148

Query: 80   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCT 139
              V++WG   +G+LG   +D     IP +++ LA + V++   G    + LT SG V   
Sbjct: 4149 DNVWSWGDGDYGKLGRGGSD--GCKIPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTW 4206

Query: 140  HKEN----GCGSDPS----------QGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
             K +    G G+             QG +   +        + +  GE++TWG+N+ GQ+
Sbjct: 4207 GKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQL 4266

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            G + + T + +P+ V+SL    I  + CG+ H+  LS
Sbjct: 4267 G-DGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4302



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 28/220 (12%)

Query: 48   SVSVVQACAGYSHCLV--LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI 105
            SVS         H ++  +   +G  H LAL+  GEVF+WG    G+LG    ++ S   
Sbjct: 4009 SVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG--HGNRDSYDR 4066

Query: 106  PKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQ-- 159
            PK ++ L+ + V+    G +H   +TS G V    K      G G    Q +Q  LV+  
Sbjct: 4067 PKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQ-LQPKLVEAL 4125

Query: 160  -------------DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNL 206
                         D+ T    +     +++WG+ +YG++G   S+     P ++ESL  L
Sbjct: 4126 LGYRAIDIACGSGDAQTLC--ITDDDNVWSWGDGDYGKLGRGGSDGCKI-PMKIESLAGL 4182

Query: 207  PIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH 246
             +  + CG+  S  L++S S +Y +G G   +L    + H
Sbjct: 4183 GVIKVECGSQFSVALTRSGS-VYTWGKGDYHRLGHGNTDH 4221



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 20/128 (15%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S+AL   G V+TWG   + +LG  + D   +  PK+V  L    ++    G  HC+    
Sbjct: 4194 SVALTRSGSVYTWGKGDYHRLGHGNTDHVRR--PKKVAALQGKKIISIATGSLHCV---- 4247

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGY 124
                    A +D GEVFTWG +  GQLG    D    +I  P+ V+ L    +V+   G 
Sbjct: 4248 --------ACSDSGEVFTWGDNDEGQLG----DGTVTAIQRPRLVQSLQGKHIVKVICGS 4295

Query: 125  SHCLVLTS 132
            +H L L++
Sbjct: 4296 AHTLALST 4303



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 53/208 (25%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+++  G  T+G+LGL      +   P++V  L    VV+  A +S         G  H+
Sbjct: 2944 GKLYACGEGTNGRLGL--GHNNNVPTPRQVPILNQY-VVKKVAVHS---------GGKHA 2991

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL   G+VF+WG    G+LG    ++ +   PK ++ L +  V     G SH   +TSS
Sbjct: 2992 MALTLDGKVFSWGEGEDGKLG--HGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAITSS 3049

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            G                                      ELYTWG  EYG++G +  N T
Sbjct: 3050 G--------------------------------------ELYTWGLGEYGRLG-HGDNCT 3070

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVL 221
              KP+ V +L    +  +ACG+  +  L
Sbjct: 3071 QLKPKLVTTLQGHRVVQVACGSRDAQTL 3098



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 17/128 (13%)

Query: 172  GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
            G++++WG  E G++G  N   T+ KP+ +ESL    +  IACG++HS  ++ S   LY +
Sbjct: 2998 GKVFSWGEGEDGKLGHGN-RLTLEKPKLIESLRTKRVRDIACGSSHSAAITSS-GELYTW 3055

Query: 232  GIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLV 278
            G+G   +L          PK V     H+  Q+  G   A  + +T  E+ LV   G   
Sbjct: 3056 GLGEYGRLGHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLT--EEGLVFSWGDGD 3113

Query: 279  VKKIYSGG 286
              K+  GG
Sbjct: 3114 FGKLGRGG 3121



 Score = 47.4 bits (111), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 14/92 (15%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G   S+AL+  G ++TWG    G+LG    + +  ++PK V+ L    +     G +HC
Sbjct: 731 SGSQFSVALSCDGTLYTWGKGHGGRLG--HGNSEHSNVPKLVRALEGKKIADVAVGSAHC 788

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQL 93
           L LTS+            GE++ WG + + Q+
Sbjct: 789 LALTSS------------GELYGWGRNDYQQI 808



 Score = 46.6 bits (109), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 26/187 (13%)

Query: 82   VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCT-- 139
            +F WG +  GQLG    D     +P   + L+ +  +Q   G      +T  G +  T  
Sbjct: 3939 IFGWGHNHRGQLG--GLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGY 3996

Query: 140  -------HKENGCGSDPS--QGVQSNLVQDSHTT-----ITSLNSPGELYTWGNNEYGQM 185
                          S P+  + +Q  +++            +L+S GE+++WG  E G++
Sbjct: 3997 GAGGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKL 4056

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHS-------FVLSKSVSRLYAFGIGSAVQ 238
            G  N + +  +P+ +E+L  + +  IACG+ HS        VL+    R    G G +  
Sbjct: 4057 GHGNRD-SYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSED 4115

Query: 239  LDSPKSV 245
               PK V
Sbjct: 4116 QLQPKLV 4122



 Score = 45.4 bits (106), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 6/67 (8%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYS 59
            TG  H +A +D GEVFTWG +  GQLG    D    +I  P+ V+ L    +V+   G +
Sbjct: 4241 TGSLHCVACSDSGEVFTWGDNDEGQLG----DGTVTAIQRPRLVQSLQGKHIVKVICGSA 4296

Query: 60   HCLVLTS 66
            H L L++
Sbjct: 4297 HTLALST 4303


>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
          Length = 5345

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 108/234 (46%), Gaps = 34/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   G+++TWG   +G+LG    D  +Q  PK+VK LA   VVQ   G     
Sbjct: 3612 GSSHSAAITSNGDLYTWGLGEYGRLG--HGDNTTQLKPKQVKALAHERVVQVACGSRDA- 3668

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G+V++WG    G+LG      +  ++P  V  L    V Q   
Sbjct: 3669 ---------QTLALTDEGKVYSWGDGDFGKLG--RGGSEGCNVPHEVDRLRDQKVCQIEC 3717

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTTITSLN-- 169
            G    L LT SG V    K +    G G+D         +G++   +   H  + +L+  
Sbjct: 3718 GAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQIVEGLKGKKI--VHVAVGALHCL 3775

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G+++ WG+N++GQ G  N  TTV +   +  L    I+ +ACG++HS  
Sbjct: 3776 AVTDSGQVFAWGDNDHGQQG--NGTTTVNRKPALVVLEGYKISKVACGSSHSIA 3827



 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 112/254 (44%), Gaps = 55/254 (21%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  HSLAL   G+VF+WG    G+LG  S  + +   P+ ++ L S  V     G SH 
Sbjct: 3559 SGGRHSLALTTDGKVFSWGEGDDGKLGHFS--RWNCDKPRLIEALKSKRVRDIACGSSHS 3616

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS             G+++TWG   +G+LG    D  +Q  PK+VK LA   VVQ  
Sbjct: 3617 AAITSN------------GDLYTWGLGEYGRLG--HGDNTTQLKPKQVKALAHERVVQVA 3662

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
                                   CGS  +Q +             +L   G++Y+WG+ +
Sbjct: 3663 -----------------------CGSRDAQTL-------------ALTDEGKVYSWGDGD 3686

Query: 182  YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
            +G++G   S      P  V+ L +  +  I CGA  S  L+KS  +++ +G G   +L  
Sbjct: 3687 FGKLGRGGSE-GCNVPHEVDRLRDQKVCQIECGAQFSLALTKS-GQVWTWGKGDYFRLGH 3744

Query: 242  PKSVH-KTPQLIHG 254
                H + PQ++ G
Sbjct: 3745 GTDAHVRKPQIVEG 3758



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 113/241 (46%), Gaps = 31/241 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   GE++TWG   +G+LG    D + Q  PK V+ L S  VV    G    
Sbjct: 4607 AGGAHSACITANGELYTWGKGRYGRLG--HGDSEDQPRPKLVEALKSYRVVDMACG---- 4660

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L + D   V++WG   +G+LG   +D     +P +++ L    V++  
Sbjct: 4661 ------SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD--GCKVPMKIETLQGQGVMKVE 4712

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSD-----PSQ--GVQSNLVQD---SHTTITS 167
             G    + LT SG V    K +    G GSD     P +   +Q+  V D         +
Sbjct: 4713 CGSQFSVALTKSGSVYTWGKGDYHRLGHGSDDHVRRPRKVSALQNKKVIDVACGSLHCVA 4772

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS--KSV 225
                GE+++WG+N+ GQ+G   +N  + +P+ V SL+   I  +ACG+ HS   S  K+V
Sbjct: 4773 CTDTGEVFSWGDNDEGQLGDGTTN-AIQRPRLVASLLGKKINRVACGSAHSLAWSTNKAV 4831

Query: 226  S 226
            S
Sbjct: 4832 S 4832



 Score = 83.2 bits (204), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 39/270 (14%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H LAL+  GEV++WG    G+LG    ++     P+ +  L    VV   AG +H 
Sbjct: 4555 SGGKHCLALSAEGEVYSWGEGEDGKLG--HGNRSPCDRPRVIDSLRGKEVVDIAAGGAHS 4612

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-A 120
              +T+             GE++TWG   +G+LG    D + Q  PK V+ L S  VV  A
Sbjct: 4613 ACITAN------------GELYTWGKGRYGRLG--HGDSEDQPRPKLVEALKSYRVVDMA 4658

Query: 121  C-AGYSHCLVLTSSGVVTC-----THKENGCGSD-----------PSQGVQSNLVQDSHT 163
            C +G +  L +T    V         K    GSD             QGV    V+    
Sbjct: 4659 CGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIETLQGQGVMK--VECGSQ 4716

Query: 164  TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
               +L   G +YTWG  +Y ++G + S+  V +P++V +L N  +  +ACG+ H    + 
Sbjct: 4717 FSVALTKSGSVYTWGKGDYHRLG-HGSDDHVRRPRKVSALQNKKVIDVACGSLHCVACTD 4775

Query: 224  SVSRLYAFGIGSAVQL-DSPKSVHKTPQLI 252
            +   ++++G     QL D   +  + P+L+
Sbjct: 4776 T-GEVFSWGDNDEGQLGDGTTNAIQRPRLV 4804



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 110/273 (40%), Gaps = 65/273 (23%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H + L   GEVF+WG    G+LG    D ++   P  + GL+   V + C G S+ + LT
Sbjct: 630 HYMGLTSDGEVFSWGNGDGGKLG--HGDYQNHEEPALITGLSGKQVAKICCGSSYSVALT 687

Query: 66  ST------------------------------------------TGLWHSLALNDCGEVF 83
           S                                           +G   +LA+ D G V+
Sbjct: 688 SNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVY 747

Query: 84  TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
           +WG   +G+LG    D      PK ++ L    VV+   G    + LT SG V    K +
Sbjct: 748 SWGDGDYGKLGRGGND--GCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGD 805

Query: 144 ----GCGSD-----PSQ--GVQSNLVQDSHTTITSLN-----SPGELYTWGNNEYGQMGI 187
               G G++     P Q   + S  V+D    I SL+       GELY WG NE GQ+G 
Sbjct: 806 NYRLGHGTEDHARHPKQIEALSSKKVKD--IAIGSLHCMAITEDGELYGWGRNEQGQLG- 862

Query: 188 NNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
           N S +  T+P  +  +    I  +ACG   +F 
Sbjct: 863 NPSISNFTEPTLIGGMEGKNIIGVACGPTQTFA 895



 Score = 73.2 bits (178), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 20/184 (10%)

Query: 72  HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
           H + L   GEVF+WG    G+LG    D ++   P  + GL+   V + C G S+ + LT
Sbjct: 630 HYMGLTSDGEVFSWGNGDGGKLG--HGDYQNHEEPALITGLSGKQVAKICCGSSYSVALT 687

Query: 132 SSGVVTCTHKEN----GCGSDPSQGV-------QSNLVQD-----SHTTITSLNSPGELY 175
           S+G V    K N    G GS   Q         + + + D           ++   G +Y
Sbjct: 688 SNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVY 747

Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
           +WG+ +YG++G    N     P+ +E L+   +  + CG   S  L+KS + +Y +G G 
Sbjct: 748 SWGDGDYGKLG-RGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGA-VYTWGKGD 805

Query: 236 AVQL 239
             +L
Sbjct: 806 NYRL 809



 Score = 56.6 bits (135), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 90/257 (35%), Gaps = 85/257 (33%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            +L+    G+++ WG +  GQLG     K  Q  P   + LA    +Q   G      +T+
Sbjct: 4454 TLSWGGSGQIWGWGHNHRGQLGGVDGAKVKQ--PVSCEALAVTRPIQLVGGEQTLFAVTA 4511

Query: 67   ------------------------------------------TTGLWHSLALNDCGEVFT 84
                                                       +G  H LAL+  GEV++
Sbjct: 4512 EGKVFATGYGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYS 4571

Query: 85   WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENG 144
            WG    G+LG    ++     P+ +  L    VV   AG +H   +T++G          
Sbjct: 4572 WGEGEDGKLG--HGNRSPCDRPRVIDSLRGKEVVDIAAGGAHSACITANG---------- 4619

Query: 145  CGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLV 204
                                        ELYTWG   YG++G  +S     +P+ VE+L 
Sbjct: 4620 ----------------------------ELYTWGKGRYGRLGHGDSEDQ-PRPKLVEALK 4650

Query: 205  NLPIALIACGANHSFVL 221
            +  +  +ACG+  +  L
Sbjct: 4651 SYRVVDMACGSGDAQTL 4667


>gi|380481586|emb|CCF41757.1| HECT-domain-containing protein [Colletotrichum higginsianum]
          Length = 1184

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 120/239 (50%), Gaps = 29/239 (12%)

Query: 858  KLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGG----RKVAYTAFYMPDLA 913
            ++    +VL  + + NN T    I     T+ N+ +    GG     ++  T+ +   + 
Sbjct: 690  QIRAAARVLSLVFAANNMT---HIRRPDHTLRNMSSSTHRGGIQAHGQIIPTSDFYNTMI 746

Query: 914  TVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYL 973
               D+  ++  W S R     R   C YPF+    AK+ +LE D R Q    M +     
Sbjct: 747  DYTDLVAEFEAWESKR----GRFSFCQYPFLLSMWAKSQILEHDARRQQ---MTKARDAF 799

Query: 974  FLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYT---TNDFKKPLKVNDTSPIYLAPQV 1030
            F        + Q+L ++V R+ +V+D+++ +++     + D KK L++            
Sbjct: 800  FDSIMTRRNVTQFLVLDVRRECLVDDSLKAVSEVIGSGSEDIKKGLRI------------ 847

Query: 1031 KFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             F+GEE  DAGG+++E+ +LL++E+ +P++GMF   E+++  +F+ ++FE  + YFL+G
Sbjct: 848  VFKGEEGLDAGGLKKEWFLLLVREVFNPEHGMFIYDEDSQFCYFNPNSFETSDQYFLVG 906



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 58/104 (55%), Gaps = 17/104 (16%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILD---------- 775
           E+++  +F+ ++FE  +  FL+G + GLAIYN TI+++  P   ++K+L           
Sbjct: 884 EDSQFCYFNPNSFETSDQYFLVGVVLGLAIYNSTILDVALPPFAFRKLLASAPSASAGSS 943

Query: 776 ---EPIL---LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
               P +   L+DL +  P LA  L+ +L+Y + D+E+ F + F
Sbjct: 944 AHPRPTMNYTLEDLAEYRPRLAAGLRQLLEY-DGDVEETFQLDF 986


>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 372

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 66/264 (25%), Positives = 124/264 (46%), Gaps = 33/264 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LA+   GEV +WG + +GQLGL   D +   +P++++    + +    AG  H     
Sbjct: 122 HCLAVTXEGEVQSWGRNQNGQLGL--GDTEDSLVPQKIQAFEGIRIKXVAAGAEH----- 174

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  + A+ + G+++ WG   +G LGL   D+  + +P+RV             G+ 
Sbjct: 175 -------TAAVTEDGDLYGWGWGRYGNLGL--GDRTDRLVPERVTSTGGEKXSXVACGWR 225

Query: 126 HCLVLTSSGVVTC----THKENGCGSDPSQGVQSNLVQDSHTTIT----------SLNSP 171
           H + ++ SG +       + + G G      +   L   S++ I+          +L S 
Sbjct: 226 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGARHTXALTSD 285

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G+LY WG N++GQ+G+ N N     P +V    +  +  ++CG  H+  +++  + ++A+
Sbjct: 286 GKLYGWGWNKFGQVGVGN-NLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTER-NNVFAW 343

Query: 232 GIGSAVQLDSPKSVHKT-PQLIHG 254
           G G+  QL   +SV +  P++I  
Sbjct: 344 GRGTNGQLGIGESVDRNFPKIIEA 367



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 82/318 (25%), Positives = 124/318 (38%), Gaps = 62/318 (19%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL     V +WG    GQLG    D + +  P ++  L    +V          
Sbjct: 14  GASHSVALLSGDIVCSWGRGEDGQLG--HGDAEDRPSPTQLSALDGHQIV---------- 61

Query: 63  VLTSTTGLWHSLALNDCG-EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
             + T G  H++A +  G EV++WG    G+LG  ++      +P  +K L  + + Q  
Sbjct: 62  --SVTCGADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLP--IKALHGIRIKQIA 117

Query: 122 AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITS 167
            G SHCL +T  G V    +      G G              +G++   V        +
Sbjct: 118 CGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAA 177

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           +   G+LY WG   YG +G+ +    +  P+RV S      + +ACG  H+  +S S   
Sbjct: 178 VTEDGDLYGWGWGRYGNLGLGDRTDRLV-PERVTSTGGEKXSXVACGWRHTISVSYS-GA 235

Query: 228 LYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHS----GGLVVKKIY 283
           LY +G              K  QL HG            ED L+ H         + +I 
Sbjct: 236 LYTYGWS------------KYGQLGHGDL----------EDHLIPHKLEALSNSFISQIS 273

Query: 284 SGGDHSIVTVTKSSDGVL 301
            G  H   T   +SDG L
Sbjct: 274 GGARH---TXALTSDGKL 288


>gi|226311363|ref|YP_002771257.1| hypothetical protein BBR47_17760 [Brevibacillus brevis NBRC 100599]
 gi|226094311|dbj|BAH42753.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 323

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 82/271 (30%), Positives = 125/271 (46%), Gaps = 50/271 (18%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSL L   G V+ WG + +GQLG  + +++++  P  VKGL  V+ + A           
Sbjct: 41  HSLILRSDGTVWAWGNNGNGQLGDGTFEQRNE--PVLVKGLTGVTKIAA----------- 87

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HSLAL   G V+ WG +  GQLG  +    S +I K V+ +    V+   AG +
Sbjct: 88  ---GSSHSLALKSDGTVWGWGWNGKGQLGNNTT--TSSNISKPVQAVGLTDVIDIAAGDA 142

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQ---------GVQSNLVQDSHTTITSLNSPGELYT 176
           H L L   G V         GS+ +           V++     +H    ++   G +++
Sbjct: 143 HGLALKKDGTVWI------WGSNSTNLPTRVESLTDVRAIAAAGAHN--LTVKKDGTVWS 194

Query: 177 WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF----- 231
           WG N YGQ+GINN+ +    P +V +L N  I  +A G +HS  L     ++YA+     
Sbjct: 195 WGWNGYGQLGINNTGSKDV-PTKVSNLSN--IVSVAAGFHHSLALDVE-GKVYAWGGNTY 250

Query: 232 ---GIGSAVQLDSPKSVHKTPQLIHGPWIAS 259
              G G+  Q ++P  V   P L+    IAS
Sbjct: 251 GQVGDGTTTQRNAPVEV---PSLVDIVEIAS 278



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 73/266 (27%), Positives = 112/266 (42%), Gaps = 77/266 (28%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL   G V+ WG +  GQLG  +    S +I K V+ +    V+   AG +H L
Sbjct: 88  GSSHSLALKSDGTVWGWGWNGKGQLGNNTT--TSSNISKPVQAVGLTDVIDIAAGDAHGL 145

Query: 63  VLTSTTGLW---------------------------HSLALNDCGEVFTWGGDTHGQLGL 95
            L     +W                           H+L +   G V++WG + +GQLG+
Sbjct: 146 ALKKDGTVWIWGSNSTNLPTRVESLTDVRAIAAAGAHNLTVKKDGTVWSWGWNGYGQLGI 205

Query: 96  ESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQS 155
            +    S+ +P +V  L+  ++V   AG+ H L                           
Sbjct: 206 NNTG--SKDVPTKVSNLS--NIVSVAAGFHHSL--------------------------- 234

Query: 156 NLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACG- 214
                      +L+  G++Y WG N YGQ+G + + T    P  V SLV+  I  IA G 
Sbjct: 235 -----------ALDVEGKVYAWGGNTYGQVG-DGTTTQRNAPVEVPSLVD--IVEIASGS 280

Query: 215 -ANHSFVLSKSVSRLYAFGIGSAVQL 239
            + H+  L K    +YA+G+G++ QL
Sbjct: 281 YSYHTLALKKD-GTVYAWGLGTSGQL 305



 Score = 42.0 bits (97), Expect = 1.9,   Method: Composition-based stats.
 Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 21/128 (16%)

Query: 112 LASVSVVQACAGYSHCLVLTSSGVV-TCTHKENGCGSDPS-------------QGVQSNL 157
            A+ +V+ + AG SH L+L S G V    +  NG   D +              GV    
Sbjct: 27  FAAGNVISSAAGGSHSLILRSDGTVWAWGNNGNGQLGDGTFEQRNEPVLVKGLTGVTKIA 86

Query: 158 VQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT--VTKPQRVESLVNLPIALIACGA 215
              SH+   +L S G ++ WG N  GQ+G NN+ T+  ++KP +   L +  +  IA G 
Sbjct: 87  AGSSHS--LALKSDGTVWGWGWNGKGQLG-NNTTTSSNISKPVQAVGLTD--VIDIAAGD 141

Query: 216 NHSFVLSK 223
            H   L K
Sbjct: 142 AHGLALKK 149


>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
           gaditana CCMP526]
          Length = 511

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 123/280 (43%), Gaps = 34/280 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++ L +  +V++WG    G+LG   AD   + +P  V  L   S+ Q         
Sbjct: 47  GSGHTVVLTEDKDVWSWGRGDDGRLG--HADNHWKYVPHLVSALTGKSIKQV-------- 96

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
               T G +H+ A++D G ++TWGG  +G+LG    ++     P RV+      V Q   
Sbjct: 97  ----TCGSYHTAAISDTGALWTWGGGMYGKLG--HGNEVGHPAPCRVEAFIGREVEQIAC 150

Query: 123 GYSHCLVLTSSGVVTC-THKENG-CGSDPS-------------QGVQSNLVQDSHTTITS 167
           G  H   L + G V C   +ENG CG   +             +GV+   +        +
Sbjct: 151 GSRHTAALLAGGEVYCWGDRENGVCGIGEAAEHQYLPKKLEALKGVKITQIAACGFHTAA 210

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           +   G L++WG  ++G++G  N    VT P  VE L  + +  +ACG  HS  +++    
Sbjct: 211 ITQDGALWSWGEGKFGRLGQGNEKNQVT-PCCVEGLQGVRVKQVACGGFHSACVTED-GD 268

Query: 228 LYAFGIGSAVQLDSPKSVHKT-PQLIHGPWIASPVAMTAG 266
           +  FG G   QL      ++T P L+     A  V +T G
Sbjct: 269 VLTFGGGEHGQLGHGDKTNRTVPCLVKALEGAGIVQVTCG 308



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 72/128 (56%), Gaps = 16/128 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HS  + + G+V T+GG  HGQLG    DK ++++P  VK L    +VQ   G+SH  
Sbjct: 256 GGFHSACVTEDGDVLTFGGGEHGQLG--HGDKTNRTVPCLVKALEGAGIVQVTCGWSH-- 311

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     ++ L++ G+VFT+G   HG+LG   A+ KS ++PK V+ LA++ V +  +
Sbjct: 312 ----------TVTLSEDGKVFTFGNGDHGKLG-HGANAKS-ALPKLVESLANMKVAKVAS 359

Query: 123 GYSHCLVL 130
              H + L
Sbjct: 360 YNEHTVAL 367


>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
          Length = 1082

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 347 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDVACG---- 400

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                 +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 401 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 452

Query: 122 AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
            G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 453 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 512

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
               GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 513 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 568



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 129/319 (40%), Gaps = 67/319 (21%)

Query: 8   LALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T+
Sbjct: 195 LSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVTA 251

Query: 67  TTGLW------------------------------------------HSLALNDCGEVFT 84
              L+                                          H LAL+  GEV++
Sbjct: 252 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYS 311

Query: 85  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKEN 143
           WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T      
Sbjct: 312 WGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 369

Query: 144 G--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGIN 188
           G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G  
Sbjct: 370 GRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 429

Query: 189 NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH-K 247
            S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H +
Sbjct: 430 GSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHVR 487

Query: 248 TPQLIHGPWIASPVAMTAG 266
            P+ + G      +A+  G
Sbjct: 488 RPRQVQGLQGKKVIAIATG 506


>gi|221056484|ref|XP_002259380.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
           knowlesi strain H]
 gi|193809451|emb|CAQ40153.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
           knowlesi strain H]
          Length = 432

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 125/278 (44%), Gaps = 45/278 (16%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS-----IPKRVKGLASVSVVQACA 56
            G  HS  + D G+++T+G +  GQLG    ++K  +      PK VK    +     C 
Sbjct: 85  AGCNHSAFIVD-GKIYTYGLNDKGQLGRSIEEEKDGNKNYSLTPKVVKTDGDIKFRDVCC 143

Query: 57  GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDT-HGQLGLESADKKSQSIPKRVKGLAS- 114
           G+ H L +     L+           + WGG+   G  GL   +K++ S PK+V+   S 
Sbjct: 144 GFKHTLAVDVNNNLYS----------WGWGGNFFKGANGLGHGNKQNLSTPKKVETFKSD 193

Query: 115 -VSVVQACAGYSHCLVLTSSG-VVTCTHKENGCGSDPSQGVQ-----------SNLVQD- 160
               V  C G  H LVLT +G V  C   E G     + G Q           +N++   
Sbjct: 194 DSEFVNICCGDQHSLVLTKNGKVYACGRGEFGRLGKGNHGDQLFFEEIDFFISNNIIVKE 253

Query: 161 ---SHTTITSLNSPGELYTWGNNEYGQMGINNS----NTTVTKPQRVE--SLVNLPIALI 211
               H+   +L++ GE+Y WG N+YGQ+GI NS     +    P +V+   + N+ I  I
Sbjct: 254 ISCGHSFSAALSTHGEVYVWGRNDYGQLGIENSIGDLYSHEVYPNKVKYFDMENIKIKFI 313

Query: 212 ACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTP 249
           ACG NH    S++      F  GS   L+ PK++  +P
Sbjct: 314 ACGDNHMIACSENN---VIFFWGSRAWLE-PKAITLSP 347


>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
          Length = 423

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 132/264 (50%), Gaps = 37/264 (14%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LA+   GEV +WG + +GQLGL + +     +P++++    VSV    AG  H     
Sbjct: 120 HCLAVTMDGEVQSWGRNQNGQLGLGTTEDSL--VPQKIQAFQGVSVKMVAAGAEH----- 172

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  + A+ + GE++ WG   +G LGL   D+  + +P++V  +  V +V+   G+ 
Sbjct: 173 -------TAAVTEDGELYGWGWGRYGNLGL--GDRNDRLVPEKVSTVEGVKMVKVACGWR 223

Query: 126 HCLVLTSSGVV----TCTHKENGCGS-------DPSQGVQSNLVQD-----SHTTITSLN 169
           H + ++SSG +       + + G G           + +Q NL+ +      HT   +L 
Sbjct: 224 HTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTM--ALT 281

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           S G+LY WG N++GQ+G+ + N     P +V+      +  I+CG  H+  +++    ++
Sbjct: 282 SDGKLYGWGWNKFGQVGVGD-NVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTER-QNVF 339

Query: 230 AFGIGSAVQLDSPKSVHKT-PQLI 252
           ++G G+  QL   +S+ +  P++I
Sbjct: 340 SWGRGTNGQLGHGESIDRNIPKMI 363



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 54/200 (27%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ +K L  + + Q   G SHCL +T              GEV +WG + +GQLGL + +
Sbjct: 100 PQPIKALHGLRIKQIACGDSHCLAVTMD------------GEVQSWGRNQNGQLGLGTTE 147

Query: 100 KKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQ 159
                +P++++    VSV    AG  H   +T                            
Sbjct: 148 DSL--VPQKIQAFQGVSVKMVAAGAEHTAAVTED-------------------------- 179

Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                       GELY WG   YG +G+ + N  +  P++V ++  + +  +ACG  H+ 
Sbjct: 180 ------------GELYGWGWGRYGNLGLGDRNDRLV-PEKVSTVEGVKMVKVACGWRHTI 226

Query: 220 VLSKSVSRLYAFGIGSAVQL 239
            +S S   LY +G     QL
Sbjct: 227 SVSSS-GGLYTYGWSKYGQL 245



 Score = 46.6 bits (109), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 19/116 (16%)

Query: 1   MTGLW-HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 59
           ++G W H++AL   G+++ WG +  GQ+G+   D      P +VK      VV    G+ 
Sbjct: 270 ISGGWRHTMALTSDGKLYGWGWNKFGQVGV--GDNVDHCSPVQVKFPHEQKVVHISCGWR 327

Query: 60  HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKGLAS 114
           H L +T                VF+WG  T+GQLG  ES D+   +IPK ++ L++
Sbjct: 328 HTLAVTERQ------------NVFSWGRGTNGQLGHGESIDR---NIPKMIEVLSA 368


>gi|315041649|ref|XP_003170201.1| ubiquitin-protein ligase E3A [Arthroderma gypseum CBS 118893]
 gi|311345235|gb|EFR04438.1| ubiquitin-protein ligase E3A [Arthroderma gypseum CBS 118893]
          Length = 1170

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 23/192 (11%)

Query: 901  KVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRI 960
            K+A   FY   L    D+ +D+  W S     S +   C Y F+    AK  ++E D R 
Sbjct: 722  KIAINHFYNARL-DYADLILDFEAWESR----SGKFSFCQYSFLLSIWAKIQIMEHDARR 776

Query: 961  QMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQY---TTNDFKKPLK 1017
            QME    +  F   L       ++QYL ++V RD + ED+++ ++        D KK L+
Sbjct: 777  QMEAKAREAFFDTILGR---RGVSQYLVLKVRRDCLAEDSLQSVSAVIGSAEEDIKKGLR 833

Query: 1018 VNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSED 1077
            +            +F GEE  DAGG+R+E+ +LL++E+ DP YG+F   E+++  +F+  
Sbjct: 834  I------------EFAGEEGIDAGGLRKEWFLLLVREVFDPLYGLFLYDEDSQYCYFNPY 881

Query: 1078 TFEDQNMYFLIG 1089
             FE    +FL+G
Sbjct: 882  CFESSEQFFLVG 893



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 18/111 (16%)

Query: 720 YGITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILD--- 775
           YG+  Y+E ++  +F+   FE     FL+G + GLAIYN TI+++  P   ++K+L    
Sbjct: 864 YGLFLYDEDSQYCYFNPYCFESSEQFFLVGVVLGLAIYNSTILDIALPPFAFRKLLAYSP 923

Query: 776 ---EPIL----------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
               P L          L DL +  P LAK L+ +L+Y + D+ + F   F
Sbjct: 924 SNVAPTLSSPPQPFKPTLDDLAEFRPALAKGLRLLLEY-DGDVAETFCQDF 973


>gi|355687448|gb|EHH26032.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 883

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 138/330 (41%), Gaps = 69/330 (20%)

Query: 9   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTT 68
           A    GE+F WG + HGQLG+      S + P+ V+ LA V + Q  AG +         
Sbjct: 85  ARTPSGELFAWGQNLHGQLGV-GRKFPSTTTPQIVEHLAGVPLAQISAGEA--------- 134

Query: 69  GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 128
              HS+AL+  G +++WG +  GQLGL     +S+  P  ++ L +  V     G SH  
Sbjct: 135 ---HSMALSMSGNIYSWGKNEFGQLGL--GHTESKDSPSLIEALDNQKVEFLACGGSHSA 189

Query: 129 VLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGIN 188
           +LT  G+                                      L+T+G  ++GQ+G +
Sbjct: 190 LLTQDGL--------------------------------------LFTFGAGKHGQLG-H 210

Query: 189 NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKT 248
           NS     +P  V  LV   +  IACG  H+        ++++FG G   QL +  ++ + 
Sbjct: 211 NSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQL 270

Query: 249 PQLIHGPWIASPVAMTAGED-SLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV--LSDDF 305
                   I  PV +++ E+  L SH+    +  I +GG+ SI+   K  +    L    
Sbjct: 271 --------IPLPVKVSSSEELKLESHTSEKELIMI-AGGNQSILLWIKKENSYVNLKRTI 321

Query: 306 RVLNPAT---QILDVNFERLKECEREVEQL 332
             LN  T    I DV  +R    +R   ++
Sbjct: 322 PTLNEGTVKRWIADVETKRWHSTKRRTTEM 351



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 1/96 (1%)

Query: 719 HYGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            YG+  Y E  S +WF      ++   F  G LCGL+++N  + N+PFPLAL+KK+LD+ 
Sbjct: 600 EYGMFMYPEGASCMWFPVRPKFEKKRYFFFGLLCGLSLFNCNVANLPFPLALFKKLLDQM 659

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
             L+DLK+LSP L K+LQ +LD    + E+VF I F
Sbjct: 660 PSLEDLKELSPDLGKNLQTLLDDEGDNFEEVFYIHF 695



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 20/143 (13%)

Query: 952  TLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQY-----LEVEVSRDNIVEDTIRELAQ 1006
             LLEM +++   H   +   YL          +++      ++ V R++++ED + +L+Q
Sbjct: 503  ALLEMLKKL---HRGKKHKAYLMAAAIEEERESEFALMPTFDLTVRRNHLIEDVLNQLSQ 559

Query: 1007 YTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEY 1066
            +   D +K L             V F GE   D  GV+REF   L +E++ P+YGMF   
Sbjct: 560  FENEDLRKEL------------WVSFSGEIGYDLVGVKREFFYCLFEEMIQPEYGMFMYP 607

Query: 1067 EETRSIWFSEDTFEDQNMYFLIG 1089
            E    +WF      ++  YF  G
Sbjct: 608  EGASCMWFPVRPKFEKKRYFFFG 630



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS+AL+  G +++WG +  GQLGL     +S+  P  ++ L +  V     G SH 
Sbjct: 131 AGEAHSMALSMSGNIYSWGKNEFGQLGL--GHTESKDSPSLIEALDNQKVEFLACGGSHS 188

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
            +LT              G +FT+G   HGQLG  S   +++  P  V  L    V Q  
Sbjct: 189 ALLTQD------------GLLFTFGAGKHGQLGHNST--QNELRPCLVAELVGNRVTQIA 234

Query: 122 AGYSHCLVLTS 132
            G  H L   S
Sbjct: 235 CGRWHTLAYVS 245


>gi|226292353|gb|EEH47773.1| E3 ubiquitin-protein ligase HUWE1 [Paracoccidioides brasiliensis
            Pb18]
          Length = 1376

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 123/255 (48%), Gaps = 30/255 (11%)

Query: 843  PGVVDSTNGDITFNR--KLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGR 900
            P   D+T   IT+++  ++    +V+  L   NN T +       R    +RT A    R
Sbjct: 867  PKSPDATQQAITYSKDWQIRAAAKVMALLFCANNMTHS-------RKRDGVRTGAEEVLR 919

Query: 901  KVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRD---FLCNYPFIFDAKAKTTLLEMD 957
                ++ ++  ++T  +  +DY   I+      +R+     C Y F     AK  +LE D
Sbjct: 920  PDGQSSRHLIPISTFYNTLLDYSDLIADFDAWESRNGQFSFCQYSFFLSIWAKIRILEHD 979

Query: 958  QRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYT---TNDFKK 1014
             R QME    +  F   L       ++QYL ++V R+ + ED++R +++       + KK
Sbjct: 980  ARRQMEEKAREAFFNSILGR---RGVSQYLVLKVRRECLAEDSLRSVSEVVGTGQEEIKK 1036

Query: 1015 PLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWF 1074
             L++            +F GEE  DAGG+R+E+ +LL++EI DP +G+F   E+++  +F
Sbjct: 1037 GLRI------------EFLGEEGVDAGGLRKEWFLLLVREIFDPLHGLFVYDEQSQYCYF 1084

Query: 1075 SEDTFEDQNMYFLIG 1089
            +   FE    +FL+G
Sbjct: 1085 NPFCFESSEQFFLVG 1099



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 21/124 (16%)

Query: 726  EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL------DEPIL 779
            E+++  +F+   FE     FL+G L GLAIYN TI+++  P   ++K+L      + P L
Sbjct: 1077 EQSQYCYFNPFCFESSEQFFLVGVLLGLAIYNSTILDIALPPFAFRKLLSCAPSNNVPAL 1136

Query: 780  ----------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFERLI 829
                      LQDL +  P LA+ L+++L+Y + D+++ F + F    ++  D Y ++L 
Sbjct: 1137 STPQQVFKCTLQDLAEYQPALARGLRNLLEY-DGDVQEAFCLDF----VIQVDRYGKKLE 1191

Query: 830  LIFK 833
            L  +
Sbjct: 1192 LPLR 1195


>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
 gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
          Length = 4996

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 108/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A++  GE++TWG   +G+LG    D  +Q  PK+V  LA   V+Q   G     
Sbjct: 3174 GSSHSAAISSQGELYTWGLGEYGRLG--HGDNATQLKPKQVTALAGRRVIQVACGSRDA- 3230

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL + G VF+WG    G+LG      +  + P  ++ L+ + V+Q   
Sbjct: 3231 ---------QTLALTEDGAVFSWGDGDFGKLG--RGGSEGSATPHEIERLSGIGVIQIEC 3279

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-------PSQGVQSNLVQDSHTTITSLN-- 169
            G    L LT +G V    K +    G G D       P  G++   V   H  + +L+  
Sbjct: 3280 GAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRV--IHVAVGALHCL 3337

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G  N+     KP  V  L  + +  +ACG++HS  
Sbjct: 3338 AVTDAGQVYAWGDNDHGQQGSGNTFVN-KKPALVIGLDAVFVNRVACGSSHSIA 3390



 Score = 87.4 bits (215), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 29/236 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   G V TWG   +G+LG    D + Q  PK V+ L     +    G     
Sbjct: 4293 GSAHSAAITSSGHVLTWGKGRYGRLG--HGDSEDQLRPKLVEALLGYRAIDIACG----- 4345

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L + D   V++WG   +G+LG   +D     +P +++ LA + V++   
Sbjct: 4346 -----SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD--GCKLPYKIESLAGLGVIKVEC 4398

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGS-----DPS-----QGVQSNLVQDSHTTITSL 168
            G    + LT SG V    K +    G GS      P      QG +   +        + 
Sbjct: 4399 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVAC 4458

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
            +  GE+YTWG+N+ GQ+G + + T + +P+ V +L    I  + CG+ H+  LS S
Sbjct: 4459 SDAGEVYTWGDNDEGQLG-DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4513



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 111/254 (43%), Gaps = 55/254 (21%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+LAL   G+VF+WG    G+LG    ++ +   P+ V+ L +  +     G S  
Sbjct: 3121 SGGKHALALTLDGKVFSWGEGEDGKLG--HGNRTTLDKPRLVEALRAKKIRDVACGSS-- 3176

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      HS A++  GE++TWG   +G+LG    D  +Q  PK+V  LA   V+Q  
Sbjct: 3177 ----------HSAAISSQGELYTWGLGEYGRLG--HGDNATQLKPKQVTALAGRRVIQV- 3223

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
                                   CGS  +Q +             +L   G +++WG+ +
Sbjct: 3224 ----------------------ACGSRDAQTL-------------ALTEDGAVFSWGDGD 3248

Query: 182  YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
            +G++G   S  + T P  +E L  + +  I CGA  S  L+++   ++ +G G   +L  
Sbjct: 3249 FGKLGRGGSEGSAT-PHEIERLSGIGVIQIECGAQFSLALTRA-GEVWTWGKGDYYRLGH 3306

Query: 242  PKSVH-KTPQLIHG 254
                H + PQ I G
Sbjct: 3307 GGDQHVRKPQPIGG 3320



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 114/290 (39%), Gaps = 72/290 (24%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+      ++ WG +  GQL GLE +  K+   P   + L+ +  VQ   G      +T
Sbjct: 4139 ALSWGGASTIYGWGHNHRGQLGGLEGSRIKT---PTPCEALSLLRPVQLAGGEQSLFAVT 4195

Query: 66   S------------------------------------------TTGLWHSLALNDCGEVF 83
                                                        +G  H LAL   GEV+
Sbjct: 4196 PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVY 4255

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
             WG    G+LG    ++ S   PK V+ L  +SV     G +H   +TSSG V    K  
Sbjct: 4256 AWGEGEDGKLG--HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKGR 4313

Query: 144  ----GCGSDPSQGVQSNLVQ---------------DSHTTITSLNSPGELYTWGNNEYGQ 184
                G G    Q ++  LV+               D+ T   + +    +++WG+ +YG+
Sbjct: 4314 YGRLGHGDSEDQ-LRPKLVEALLGYRAIDIACGSGDAQTLCITDDD--NVWSWGDGDYGK 4370

Query: 185  MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
            +G   S+     P ++ESL  L +  + CG+  S  L+KS + +Y +G G
Sbjct: 4371 LGRGGSD-GCKLPYKIESLAGLGVIKVECGSQFSVALTKSGA-VYTWGKG 4418



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 61/232 (26%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LA++     ++WG     +LG    D  ++++P ++      S +  C     C    
Sbjct: 626 HFLAIDSNRNAYSWGAGEDHRLG--HGDTHARAVPTKI------SALDRCVKAVFC---- 673

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC--AG 123
              G  +S A+   G ++TWG  T+G+LG  ++D   Q +P  V  LA   ++     +G
Sbjct: 674 ---GCSYSAAITWSGNLYTWGRGTYGRLGHGNSD--DQCVPAIVMALAEYEIIDVALGSG 728

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
            +H L LTS G+V                                      Y WG+ +YG
Sbjct: 729 DAHSLCLTSEGLV--------------------------------------YAWGDGDYG 750

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
           ++G  N N+++ +P  VE+L    +  I  GA  S  L+ +   LY++G  S
Sbjct: 751 KLGNGNCNSSL-QPILVETLPR--VQRIFAGAQSSMALT-TEGHLYSWGKAS 798



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 53/209 (25%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+VF  G  T+G+LGL      +  +P ++  L    VV+  A +S         G  H+
Sbjct: 3079 GKVFACGEGTNGRLGL--GVTHNVPLPHQLPVLHQY-VVKKVAVHS---------GGKHA 3126

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL   G+VF+WG    G+LG    ++ +   P+ V+ L +  +     G SH       
Sbjct: 3127 LALTLDGKVFSWGEGEDGKLG--HGNRTTLDKPRLVEALRAKKIRDVACGSSHS------ 3178

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                             +++S GELYTWG  EYG++G +  N T
Sbjct: 3179 --------------------------------AAISSQGELYTWGLGEYGRLG-HGDNAT 3205

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLS 222
              KP++V +L    +  +ACG+  +  L+
Sbjct: 3206 QLKPKQVTALAGRRVIQVACGSRDAQTLA 3234



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 108/240 (45%), Gaps = 35/240 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   G ++TWG  T+G+LG  ++D   Q +P  V  LA   ++    G     
Sbjct: 674 GCSYSAAITWSGNLYTWGRGTYGRLGHGNSD--DQCVPAIVMALAEYEIIDVALG----- 726

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G  HSL L   G V+ WG   +G+LG  + +   Q  P  V+ L  V  + A A
Sbjct: 727 -----SGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQ--PILVETLPRVQRIFAGA 779

Query: 123 GYSHCLV----LTSSGVVTC-THKE-----NGCGSDPS--QGVQSNLVQDSHTTIT---S 167
             S  L     L S G  +C  H++      GC S P     +Q   + D    +    +
Sbjct: 780 QSSMALTTEGHLYSWGKASCLGHQQVERSVQGC-SVPRLVSSLQHKRLVDVAVGVAHCLA 838

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPI---ALIACGANHSFVLSKS 224
           L S GE++ WG N+  Q  I  S+ +     R+  LV LP    + IAC A+ S + ++S
Sbjct: 839 LTSCGEVFGWGRNDSQQ--ICPSSVSCEPLLRLPILVGLPTLPASGIACTASQSLIWTQS 896



 Score = 44.3 bits (103), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 6/68 (8%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYS 59
            TG  H +A +D GEV+TWG +  GQLG    D    +I  P+ V  L    +V+   G +
Sbjct: 4450 TGSLHCVACSDAGEVYTWGDNDEGQLG----DGTVTAIQRPRLVAALQGKHIVKVTCGSA 4505

Query: 60   HCLVLTST 67
            H L L+++
Sbjct: 4506 HTLALSTS 4513


>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 4834

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 109/238 (45%), Gaps = 29/238 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D + Q  PK V+ L    V+    G     
Sbjct: 4115 GGAHSAAVTAGGEIYTWGKGRYGRLG--HGDSEDQMKPKLVETLIGFKVIDIACG----- 4167

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L + D   V++WG   +G+LG   +D     IP +++ LA + VV+   
Sbjct: 4168 -----SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD--GCKIPMKIESLAGLGVVKVEC 4220

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSL 168
            G    + LT SG V    K +    G GSD            QG +   +        + 
Sbjct: 4221 GSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHVRHPKKIAALQGKKIICIATGSLHCVAC 4280

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +  GE++TWG+N+ GQ+G    N  + +P+ V +L    I  +ACG+ HS   S + S
Sbjct: 4281 SDLGEVFTWGDNDEGQLGDGTMN-AIHRPRLVVTLQGKNINRVACGSAHSLAWSTNKS 4337



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 108/238 (45%), Gaps = 33/238 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A++  GE+FTWG   +G+LG    D  +Q  PK VK L    +VQ   G     
Sbjct: 3132 GSSHSAAISSTGELFTWGLGEYGRLG--HGDNLTQLRPKLVKALLGHHIVQVACGSRDA- 3188

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL+  G VF+WG    G+LG      +   IP  ++ L  + V     
Sbjct: 3189 ---------QTLALSAEGLVFSWGDGDFGKLG--RGGSEGCDIPHNIERLNGLGVCMIEC 3237

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDS-------HTTITSLN-- 169
            G    L LT  G V    K +    G GSD  Q V+   + +S       H  + +L+  
Sbjct: 3238 GAQFSLALTKFGQVYTWGKGDYFRLGHGSD--QHVRKPTLVESLSEKKIVHVAVGALHCL 3295

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                 G++Y WG+N++GQ G N +     KP  V +L  + +  +ACG++HS   + S
Sbjct: 3296 CATDQGQVYAWGDNDHGQQG-NGTILVNRKPSLVLNLEGVRVNRVACGSSHSIAWTTS 3352



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 55/253 (21%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++AL   G+VF+WG    G+LG +  ++ S   PK ++ L S  +     G SH 
Sbjct: 3079 SGGKHAMALTLDGKVFSWGEGEDGKLGHD--NRLSLDRPKMIEALKSKRIRDIACGSSHS 3136

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              ++ST            GE+FTWG   +G+LG    D  +Q  PK VK L    +VQ  
Sbjct: 3137 AAISST------------GELFTWGLGEYGRLG--HGDNLTQLRPKLVKALLGHHIVQV- 3181

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
                                   CGS  +Q +             +L++ G +++WG+ +
Sbjct: 3182 ----------------------ACGSRDAQTL-------------ALSAEGLVFSWGDGD 3206

Query: 182  YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
            +G++G   S      P  +E L  L + +I CGA  S  L+K   ++Y +G G   +L  
Sbjct: 3207 FGKLGRGGSE-GCDIPHNIERLNGLGVCMIECGAQFSLALTK-FGQVYTWGKGDYFRLGH 3264

Query: 242  PKSVH-KTPQLIH 253
                H + P L+ 
Sbjct: 3265 GSDQHVRKPTLVE 3277



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 29/236 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GEV+TWG   +G+LG  +++    ++P  V GL    +V    G     
Sbjct: 581 GATYSAAVTSSGEVYTWGRGNYGRLGHGTSE--DHTVPTLVVGLKDYFIVDIACG----- 633

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G VF+WG   +G+LG   +D      PK ++ L  + V +   
Sbjct: 634 -----SGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSD--GSKTPKLIEKLQDIEVARVYC 686

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    L LT SG V    K +    G GS+         +G+    ++        + +L
Sbjct: 687 GSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSGHVLAL 746

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              GE+Y WG N+ GQ+G   S T V++P  +  L    I  I CG N S   S S
Sbjct: 747 TDDGEVYGWGRNDNGQVG-ETSETNVSEPTLLTLLQGKNIVDIDCGPNQSIAWSSS 801



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 117/252 (46%), Gaps = 59/252 (23%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+  G+V++WG    G+LG    D  S+  P ++  L   +V+    G ++   +T
Sbjct: 532 HSLALSCDGDVYSWGNGDGGRLG--HGDNNSRDQPTKITELVGKNVIHISCGATYSAAVT 589

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
           S+            GEV+TWG   +G+LG  +++    ++P  V GL    +V  AC +G
Sbjct: 590 SS------------GEVYTWGRGNYGRLGHGTSE--DHTVPTLVVGLKDYFIVDIACGSG 635

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
            +  L +T++G+V                                      ++WG+  YG
Sbjct: 636 DAQTLAVTNTGLV--------------------------------------FSWGDGGYG 657

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPK 243
           ++G   S+ + T P+ +E L ++ +A + CG+  S  L+KS S +Y +G G   +L    
Sbjct: 658 KLGTGGSDGSKT-PKLIEKLQDIEVARVYCGSQFSLALTKSGS-VYTWGKGDNHRLGHGS 715

Query: 244 SVH-KTPQLIHG 254
             H + P+L+ G
Sbjct: 716 ENHVRFPKLVEG 727



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 54/222 (24%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+++  G  T+G+LGL  ++  + + P ++  L    V++  A +S         G  H+
Sbjct: 3037 GKLYACGEGTNGRLGLGHSN--NVATPCQLTSLNQY-VIKKVAVHS---------GGKHA 3084

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL   G+VF+WG    G+LG +  ++ S   PK ++ L S  +     G SH   ++S+
Sbjct: 3085 MALTLDGKVFSWGEGEDGKLGHD--NRLSLDRPKMIEALKSKRIRDIACGSSHSAAISST 3142

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            G                                      EL+TWG  EYG++G +  N T
Sbjct: 3143 G--------------------------------------ELFTWGLGEYGRLG-HGDNLT 3163

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL-YAFGIG 234
              +P+ V++L+   I  +ACG+  +  L+ S   L +++G G
Sbjct: 3164 QLRPKLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDG 3205



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 90/257 (35%), Gaps = 85/257 (33%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            +L     G ++ WG +  GQLG    +     IP   + L+++  VQ   G    L +TS
Sbjct: 3961 TLTWGGSGTIYGWGHNHRGQLG--GVEGPKVKIPTSCEALSALRPVQLVGGEQTLLAVTS 4018

Query: 67   ------------------------------------------TTGLWHSLALNDCGEVFT 84
                                                       +G  H LAL+  G+V++
Sbjct: 4019 DGKVYATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYS 4078

Query: 85   WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENG 144
            WG    G+LG    +K     P+ +  L    +V    G +H   +T+ G          
Sbjct: 4079 WGEGDDGKLG--HGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTAGG---------- 4126

Query: 145  CGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLV 204
                                        E+YTWG   YG++G  +S   + KP+ VE+L+
Sbjct: 4127 ----------------------------EIYTWGKGRYGRLGHGDSEDQM-KPKLVETLI 4157

Query: 205  NLPIALIACGANHSFVL 221
               +  IACG+  +  L
Sbjct: 4158 GFKVIDIACGSGDAQTL 4174



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 20/136 (14%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S+AL   G V+TWG   + +LG  S +      PK++  L    ++    G  HC+    
Sbjct: 4225 SVALTRSGSVYTWGKGDYHRLGHGSDEHVRH--PKKIAALQGKKIICIATGSLHCV---- 4278

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGY 124
                    A +D GEVFTWG +  GQLG    D    +I  P+ V  L   ++ +   G 
Sbjct: 4279 --------ACSDLGEVFTWGDNDEGQLG----DGTMNAIHRPRLVVTLQGKNINRVACGS 4326

Query: 125  SHCLVLTSSGVVTCTH 140
            +H L  +++   + TH
Sbjct: 4327 AHSLAWSTNKSTSATH 4342



 Score = 41.2 bits (95), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 32/175 (18%)

Query: 161  SHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
            SH+ + S +SP +++ WG N+  Q+G     + V  P   ESL  L    IA G+   F+
Sbjct: 2975 SHSKLWS-DSPTKVFVWGLNDKDQLG-GLKGSKVKVPVYSESLTALKPIHIAGGSKSLFI 3032

Query: 221  LSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVK 280
            +S    +LYA G G+  +L           L H   +A+P  +T    SL  +    V+K
Sbjct: 3033 VSYD-GKLYACGEGTNGRLG----------LGHSNNVATPCQLT----SLNQY----VIK 3073

Query: 281  K--IYSGGDHS--------IVTVTKSSDGVLSDDFRV-LNPATQILDVNFERLKE 324
            K  ++SGG H+        + +  +  DG L  D R+ L+    I  +  +R+++
Sbjct: 3074 KVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIRD 3128



 Score = 40.0 bits (92), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 6/67 (8%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYS 59
            TG  H +A +D GEVFTWG +  GQLG    D    +I  P+ V  L   ++ +   G +
Sbjct: 4272 TGSLHCVACSDLGEVFTWGDNDEGQLG----DGTMNAIHRPRLVVTLQGKNINRVACGSA 4327

Query: 60   HCLVLTS 66
            H L  ++
Sbjct: 4328 HSLAWST 4334


>gi|355749435|gb|EHH53834.1| E3 ISG15--protein ligase HERC5 [Macaca fascicularis]
          Length = 854

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 137/325 (42%), Gaps = 69/325 (21%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
           GE+F WG + HGQLG+      S + P+ V+ LA V + Q  AG +            HS
Sbjct: 82  GELFAWGQNLHGQLGV-GRKFPSTTTPQIVEHLAGVPLAQISAGEA------------HS 128

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
           +AL+  G +++WG +  GQLGL     +S+  P  ++ L +  V     G SH  +LT  
Sbjct: 129 MALSMSGNIYSWGKNEFGQLGL--GHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQD 186

Query: 134 GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
           G+                                      L+T+G  ++GQ+G +NS   
Sbjct: 187 GL--------------------------------------LFTFGAGKHGQLG-HNSTQN 207

Query: 194 VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIH 253
             +P  V  LV   +  IACG  H+        ++++FG G   QL +  ++ +      
Sbjct: 208 ELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQL----- 262

Query: 254 GPWIASPVAMTAGED-SLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV--LSDDFRVLNP 310
              I  PV +++ E+  L SH+    +  I +GG+ SI+   K  +    L      LN 
Sbjct: 263 ---IPLPVKVSSSEELKLESHTSEKELIMI-AGGNQSILLWIKKENSYVNLKRTIPTLNE 318

Query: 311 AT---QILDVNFERLKECEREVEQL 332
            T    I DV  +R    +R   ++
Sbjct: 319 GTVKRWIADVETKRWHSTKRRTTEM 343



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 1/95 (1%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF      ++   F  G LCGL+++N  + N+PFPLAL+KK+LD+  
Sbjct: 572 YGMFMYPEGASCMWFPVRPKFEKKRYFFFGLLCGLSLFNCNVANLPFPLALFKKLLDQMP 631

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            L+DLK+LSP L K+LQ +LD    + E+VF I F
Sbjct: 632 SLEDLKELSPDLGKNLQTLLDDEGDNFEEVFYIHF 666



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 20/143 (13%)

Query: 952  TLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQY-----LEVEVSRDNIVEDTIRELAQ 1006
             LLEM +++   H   +   YL          +++      ++ V R++++ED + +L+Q
Sbjct: 474  ALLEMLKKL---HRGKKHKAYLMAAAIEEERESEFALMPTFDLTVRRNHLIEDVLNQLSQ 530

Query: 1007 YTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEY 1066
            +   D +K L             V F GE   D  GV+REF   L +E++ P+YGMF   
Sbjct: 531  FENEDLRKEL------------WVSFSGEIGYDLVGVKREFFYCLFEEMIQPEYGMFMYP 578

Query: 1067 EETRSIWFSEDTFEDQNMYFLIG 1089
            E    +WF      ++  YF  G
Sbjct: 579  EGASCMWFPVRPKFEKKRYFFFG 601



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS+AL+  G +++WG +  GQLGL     +S+  P  ++ L +  V     G SH 
Sbjct: 123 AGEAHSMALSMSGNIYSWGKNEFGQLGL--GHTESKDSPSLIEALDNQKVEFLACGGSHS 180

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
            +LT              G +FT+G   HGQLG  S   +++  P  V  L    V Q  
Sbjct: 181 ALLTQD------------GLLFTFGAGKHGQLGHNST--QNELRPCLVAELVGNRVTQIA 226

Query: 122 AGYSHCLVLTS 132
            G  H L   S
Sbjct: 227 CGRWHTLAYVS 237


>gi|149240441|ref|XP_001526096.1| hypothetical protein LELG_02654 [Lodderomyces elongisporus NRRL
            YB-4239]
 gi|146450219|gb|EDK44475.1| hypothetical protein LELG_02654 [Lodderomyces elongisporus NRRL
            YB-4239]
          Length = 922

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/167 (34%), Positives = 87/167 (52%), Gaps = 21/167 (12%)

Query: 927  SGRPNGSTRDF---LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTL 983
            SG  N  + +F   +C YPF     +K ++LE + R QME    +     F+ + +   +
Sbjct: 507  SGARNSKSVNFNFYMCQYPFTISLGSKISILEHEARRQMERKAEEA----FINSLDKRVV 562

Query: 984  -NQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGG 1042
             + +L + V RD++V+D++R L Q     FKK L+V             F  E   DAGG
Sbjct: 563  FDTHLRISVRRDHVVQDSLRCL-QNNLGSFKKSLRV------------LFLNEPGIDAGG 609

Query: 1043 VRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            VR+E+ MLL KEI +P  GMF   E++  +WF+    E ++MY L G
Sbjct: 610  VRKEWFMLLTKEIFNPLSGMFSNIEDSNLLWFALGPTEREDMYQLFG 656



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 1/92 (1%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKD 785
           E++  +WF+    E ++M  L G++ GLA+YN T++ + FP ALYK +  + +   D K 
Sbjct: 634 EDSNLLWFALGPTEREDMYQLFGSILGLALYNSTVLELNFPQALYKVLAGKSLNQLDYKT 693

Query: 786 LSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
           L PT+ +SL  +      +L +  G+TF   Y
Sbjct: 694 LHPTIYRSLSSLRKVDANEL-NTLGLTFEVTY 724


>gi|167518173|ref|XP_001743427.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778526|gb|EDQ92141.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1024

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 152/378 (40%), Gaps = 78/378 (20%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           SL L+D G+V+  G    GQLG      ++   +PK ++ L  V +V    G  H L L+
Sbjct: 94  SLMLDDRGKVYAVGAGERGQLGCGRQTSEEGHRVPKIIRSLHDVPIVALSVGGRHALALS 153

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           +++             VF WG + +GQLG        Q  P  +  L    VV   AG  
Sbjct: 154 ASS------------IVFAWGENANGQLGNGHFVPSYQPTP--IPELNGRGVVGLAAGRQ 199

Query: 126 HCLVLTSSGVVTC----THKENGCGSDPSQ--------GVQSNLVQDSHTTITSL--NSP 171
           H L LT++  +       H + G G    +         ++  LV+ S     SL  ++ 
Sbjct: 200 HSLALTAASELYAFGANEHGQLGVGDTKPRLRPELVRAALRKGLVKVSAGDFHSLARSAT 259

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLP-IALIACGANHSFVLSKSVSRLYA 230
           G  + WG N++GQ G+ +    +  P+ ++S+     IA IA G  HS +L         
Sbjct: 260 GHAFAWGGNQWGQCGVGDDADAILLPREIDSVQEHGHIADIATGKRHSVLLV-------- 311

Query: 231 FGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSI 290
             + S     +P + HK  QL+           T G +SL           + +GGDHS+
Sbjct: 312 --VTSNQTTPTPSTFHK--QLL----------FTFGANSLAQLG-------VAAGGDHSL 350

Query: 291 V-------TVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLL 343
           V          +S      DD  +  P   I  +  ++++E  R         T    L 
Sbjct: 351 VLYEERAEEAPESKRAFAFDDLAIAMP---IAALTADQVRELAR---------TDRPRLH 398

Query: 344 LYLETVFLSPGCMNGSFL 361
             LE +  S GC+N +FL
Sbjct: 399 QQLEIMLSSAGCLNAAFL 416



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 91/221 (41%), Gaps = 24/221 (10%)

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
            +  G +HSL +   G V++ G + H QLG          I KR++ +   S+ Q  AG 
Sbjct: 36  AAAAGAYHSLLVTTDGLVYSAGKNDHRQLGRSG----PAGIFKRIEAIEVASIRQVAAGE 91

Query: 125 SHCLVLTSSGVVTCT----HKENGCGSDPSQGVQS--NLVQDSHTT-ITSLNSPGE---- 173
              L+L   G V         + GCG   S+       +++  H   I +L+  G     
Sbjct: 92  DFSLMLDDRGKVYAVGAGERGQLGCGRQTSEEGHRVPKIIRSLHDVPIVALSVGGRHALA 151

Query: 174 ------LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
                 ++ WG N  GQ+G N       +P  +  L    +  +A G  HS  L+ + S 
Sbjct: 152 LSASSIVFAWGENANGQLG-NGHFVPSYQPTPIPELNGRGVVGLAAGRQHSLALT-AASE 209

Query: 228 LYAFGIGSAVQLDSPKSVHK-TPQLIHGPWIASPVAMTAGE 267
           LYAFG     QL    +  +  P+L+        V ++AG+
Sbjct: 210 LYAFGANEHGQLGVGDTKPRLRPELVRAALRKGLVKVSAGD 250



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 5/106 (4%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK   + +   E E  R  WF+  T +     + +G L GLA+YN+ ++   FP   YK 
Sbjct: 703 PKLYAHAFVPMESEGLRWFWFAGPTEDRLQAYYAMGLLFGLALYNHVLVEPLFPSVFYKM 762

Query: 773 -ILDEP----ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
            +L +P    + L DL   +P +AK L+ +LDY   + ++VFG+TF
Sbjct: 763 LLLADPEMSQLTLDDLASCAPDVAKGLRSLLDYDGHNEKEVFGLTF 808



 Score = 57.0 bits (136), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 18/135 (13%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HSLAL    E++ +G + HGQLG+   D K +  P+ V+      +V+  AG    
Sbjct: 196 AGRQHSLALTAASELYAFGANEHGQLGV--GDTKPRLRPELVRAALRKGLVKVSAGD--- 250

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGL---ASVSVV 118
                    +HSLA +  G  F WGG+  GQ G+   D  +  +P+ +  +     ++ +
Sbjct: 251 ---------FHSLARSATGHAFAWGGNQWGQCGV-GDDADAILLPREIDSVQEHGHIADI 300

Query: 119 QACAGYSHCLVLTSS 133
                +S  LV+TS+
Sbjct: 301 ATGKRHSVLLVVTSN 315



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 26/190 (13%)

Query: 901  KVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLL-EMDQR 959
            K+  +AFY   + +   +  +   W+  + N  +    C +PF+     K  ++ +  Q 
Sbjct: 574  KLKASAFYNDHIGSTPAMLQEMLVWVLNKSNVFS---FCMFPFLIPLPVKEQIVFQASQA 630

Query: 960  IQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVN 1019
              M+ AM      +      P      L ++V R +I+EDT++ L+  +   + KPL+  
Sbjct: 631  AMMQSAMTS----MLTGAEAP-----VLVLKVRRTDILEDTMKALSMVSPTQWTKPLR-- 679

Query: 1020 DTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTF 1079
                      +KF  EE  D GG+ +EF  L++ ++    + +  E E  R  WF+  T 
Sbjct: 680  ----------IKFEDEEGVDEGGLVKEFFQLVMPKLYAHAF-VPMESEGLRWFWFAGPTE 728

Query: 1080 EDQNMYFLIG 1089
            +    Y+ +G
Sbjct: 729  DRLQAYYAMG 738


>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1081

 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 128/264 (48%), Gaps = 43/264 (16%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL   G V+ WG + +GQLG  S  ++    P +V G+A  + + A           
Sbjct: 461 HSLALRSDGTVWAWGDNAYGQLGDTSGGRRPS--PAQVPGVAGATEIAA----------- 507

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G +HSLAL   G V+TWG +++GQLG   A  +    P  V GLA ++ V   AG  
Sbjct: 508 ---GTYHSLALRSDGTVWTWGDNSYGQLG-AGATPRGPRAPAVVPGLAVITHV--AAGLF 561

Query: 126 HCLVLTSSGVVTC----THKENGCGSDPSQ-----------GVQSNLVQDSHTTITSLNS 170
           H L L SSG V       + + G GS  S+           G+Q+ +   S++   +L +
Sbjct: 562 HSLALDSSGQVWAWGDNVYGQLGDGSTTSRNVPGRVSGLPAGIQAIVAGPSYS--VALGA 619

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS-KSVSRLY 229
            G ++TWG N  GQ+G     TT  +P  V + V+LP  L+A     S  ++  +   L+
Sbjct: 620 DGSVWTWGENSNGQLG---DGTTTARP--VPARVSLPATLVALSTRGSHTVALDTTGMLW 674

Query: 230 AFGIGSAVQLDSPKSVHK-TPQLI 252
           A+G   + QL +   V + TP+ +
Sbjct: 675 AWGRNVSGQLGNGTLVSESTPRRV 698



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 129/253 (50%), Gaps = 42/253 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL   G V+TWG +++GQLG   A  +    P  V GLA ++ V A        
Sbjct: 508 GTYHSLALRSDGTVWTWGDNSYGQLG-AGATPRGPRAPAVVPGLAVITHVAA-------- 558

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA-C 121
                 GL+HSLAL+  G+V+ WG + +GQLG  S    S+++P RV GL   + +QA  
Sbjct: 559 ------GLFHSLALDSSGQVWAWGDNVYGQLGDGS--TTSRNVPGRVSGLP--AGIQAIV 608

Query: 122 AGYSHCLVLTSSGVVTCTHKEN-----GCGSDPSQGVQSNL----------VQDSHTTIT 166
           AG S+ + L + G V  T  EN     G G+  ++ V + +           + SHT   
Sbjct: 609 AGPSYSVALGADGSV-WTWGENSNGQLGDGTTTARPVPARVSLPATLVALSTRGSHT--V 665

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L++ G L+ WG N  GQ+G N +  + + P+RV S     +   A G   +F L ++  
Sbjct: 666 ALDTTGMLWAWGRNVSGQLG-NGTLVSESTPRRVPSFAR--VQGFASGLRTTFAL-RADG 721

Query: 227 RLYAFGIGSAVQL 239
            ++A+G  S  QL
Sbjct: 722 TVWAWGDNSLGQL 734



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 127/298 (42%), Gaps = 69/298 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL HSL +   G V+ WG +  GQLG  S  +   S P +V GL  V+ V A        
Sbjct: 56  GLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQ--HSTPTQVVGLTGVTAVAA-------- 105

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQAC 121
                 G  HS+AL + G V+TWG +T GQLG    D  SQ S+P +V GL  V+ +   
Sbjct: 106 ------GNTHSMALREEGTVWTWGTNTDGQLG----DGVSQRSVPAQVAGLTGVTAI--A 153

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
           AG  H L L +                                       G ++ WGNN 
Sbjct: 154 AGNLHSLALIN---------------------------------------GAVWAWGNNT 174

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL-D 240
            GQ+G + S+T+ + P +V  L    +  IA G  HS  L +    ++A+G   + QL D
Sbjct: 175 TGQLG-DGSSTSRSTPAKVAGLTE--VVAIAAGDFHSLALKRD-GTVWAWGGNYSGQLGD 230

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSD 298
                  TP  + G  +   VA+  G    V+ S   +  K+++ GD++   +    D
Sbjct: 231 GTLDSRSTPVRVSG--LTGIVALAGGGSHSVAASSTTLGGKVWAWGDNTYGQLGNGGD 286



 Score = 80.5 bits (197), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 110/250 (44%), Gaps = 61/250 (24%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL + G V+ WG +T GQLG  S    S+S P +V GL  V  + A           
Sbjct: 158 HSLALIN-GAVWAWGNNTTGQLGDGS--STSRSTPAKVAGLTEVVAIAA----------- 203

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G +HSLAL   G V+ WGG+  GQLG  + D  S+S P RV GL    +V    G S
Sbjct: 204 ---GDFHSLALKRDGTVWAWGGNYSGQLGDGTLD--SRSTPVRVSGL--TGIVALAGGGS 256

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           H +  +S                                 T+L   G+++ WG+N YGQ+
Sbjct: 257 HSVAASS---------------------------------TTLG--GKVWAWGDNTYGQL 281

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ-LDSPKS 244
           G N  + +   P  V  L    +  +A G +HS  L +    ++A+G  +  Q   +  S
Sbjct: 282 G-NGGDVSSLLPLEVPGLTQ--VVALASGTSHSLAL-RGDDSVWAWGDNAQAQTAQTGTS 337

Query: 245 VHKTPQLIHG 254
           V + P  + G
Sbjct: 338 VQRVPVRVSG 347



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 128/272 (47%), Gaps = 48/272 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGL-ASVSVVQACAGYSHC 61
           GL+HSLAL+  G+V+ WG + +GQLG  S    S+++P RV GL A +  + A   Y   
Sbjct: 559 GLFHSLALDSSGQVWAWGDNVYGQLGDGS--TTSRNVPGRVSGLPAGIQAIVAGPSY--- 613

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      S+AL   G V+TWG +++GQLG       ++ +P RV  L +  V  + 
Sbjct: 614 -----------SVALGADGSVWTWGENSNGQLG--DGTTTARPVPARVS-LPATLVALST 659

Query: 122 AGYSHCLVLTSSGVVTCTHKE------NG---CGSDPS--------QGVQSNLVQDSHTT 164
            G SH + L ++G++    +       NG     S P         QG  S L      T
Sbjct: 660 RG-SHTVALDTTGMLWAWGRNVSGQLGNGTLVSESTPRRVPSFARVQGFASGL-----RT 713

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
             +L + G ++ WG+N  GQ+G   +  T   P  V+++       +A GA H   +S  
Sbjct: 714 TFALRADGTVWAWGDNSLGQLG---NGATSASPVPVQAVGYPRTVPLASGAQHVLAVSSD 770

Query: 225 VSRLYAFGIGSAVQLDSPKSVHKT-PQLIHGP 255
            S +++FG  S  QL    S  +T P+ + GP
Sbjct: 771 GS-VFSFGSNSRGQLGYEGSATQTSPRWLTGP 801



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 108/231 (46%), Gaps = 42/231 (18%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            H+LA+   G V+ WG +  GQLG       S+++P +VK L  V  V   +G        
Sbjct: 863  HALAVRADGTVWAWGANGSGQLG--DGTTTSRAVPMQVKELVDVVAVAGGSG-------- 912

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  HSLA+   G V+ WG +  GQLG       S+++P  V  L+ V  +   +G  
Sbjct: 913  ------HSLAVRADGTVWAWGANGSGQLG--DGTTTSRTLPVFVSTLSGVQAI--ASGAQ 962

Query: 126  HCLVLTSSGVVTCTHKENGCG----------SDPSQ-----GVQSNLVQDSHTTITSLNS 170
            H L L   GVV      NG G          + P Q     GVQ  LV  +  ++    +
Sbjct: 963  HSLALAEGGVV-WAWGANGSGQLGDGTTTSRTRPVQVSGLSGVQ-GLVAGASFSLAL--T 1018

Query: 171  PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
            PG++++WGNN  GQ+G    N+  ++P    +L +  +AL A GA H+ VL
Sbjct: 1019 PGKVWSWGNNSAGQLGDGTLNSR-SQPGAGPTLSSF-VALSA-GAQHTVVL 1066



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 141/324 (43%), Gaps = 70/324 (21%)

Query: 1    MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
             +G  H LA++  G VF++G ++ GQLG E     +Q+ P+ + G   +  V A A +S 
Sbjct: 758  ASGAQHVLAVSSDGSVFSFGSNSRGQLGYEG--SATQTSPRWLTGPECIEAVAAGALFS- 814

Query: 61   CLVLTSTTGLW--------------------------------------HSLALNDCGEV 82
             L L+   G+W                                      H+LA+   G V
Sbjct: 815  -LALSCDGGVWAWGDNGSGQLGDGAVTARTAPARVPGLAHVVAIAAGSDHALAVRADGTV 873

Query: 83   FTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKE 142
            + WG +  GQLG       S+++P +VK L  V VV    G  H L + + G V      
Sbjct: 874  WAWGANGSGQLG--DGTTTSRAVPMQVKEL--VDVVAVAGGSGHSLAVRADGTV-WAWGA 928

Query: 143  NGCG--SDPS-------------QGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGI 187
            NG G   D +              GVQ+      H+   +L   G ++ WG N  GQ+G 
Sbjct: 929  NGSGQLGDGTTTSRTLPVFVSTLSGVQAIASGAQHS--LALAEGGVVWAWGANGSGQLG- 985

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK 247
            + + T+ T+P +V  L  +   L+   A  SF L+ +  +++++G  SA QL    +++ 
Sbjct: 986  DGTTTSRTRPVQVSGLSGVQ-GLV---AGASFSLALTPGKVWSWGNNSAGQLGD-GTLNS 1040

Query: 248  TPQLIHGPWIASPVAMTAGEDSLV 271
              Q   GP ++S VA++AG    V
Sbjct: 1041 RSQPGAGPTLSSFVALSAGAQHTV 1064



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 124/320 (38%), Gaps = 77/320 (24%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL   G V+ WGG+  GQLG  + D  S+S P RV GL    +V    G SH +  +
Sbjct: 207 HSLALKRDGTVWAWGGNYSGQLGDGTLD--SRSTPVRVSGL--TGIVALAGGGSHSVAAS 262

Query: 66  STT-----------------------------------------GLWHSLALNDCGEVFT 84
           STT                                         G  HSLAL     V+ 
Sbjct: 263 STTLGGKVWAWGDNTYGQLGNGGDVSSLLPLEVPGLTQVVALASGTSHSLALRGDDSVWA 322

Query: 85  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA-GYSHCLVLTSSGVVTCTHKEN 143
           WG +   Q          Q +P RV G   VS  QA A G +  LV     V T     N
Sbjct: 323 WGDNAQAQT--AQTGTSVQRVPVRVSG---VSDAQALACGNAFSLVGRGDNV-TLGWGAN 376

Query: 144 GCGS--------------DPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINN 189
           G G                PS    ++L    H       + G ++ WG+N YGQ+G   
Sbjct: 377 GSGQLGNGSSSVRALPGRVPSLTAGASLAAGDHHVFLR-QADGSVWAWGDNTYGQLG--- 432

Query: 190 SNTTVTKPQ--RVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL-DSPKSVH 246
             T V++P   R+ S +    AL A  + HS  L +S   ++A+G  +  QL D+     
Sbjct: 433 DGTLVSRPAPVRLSSTLTSVRALSAS-SYHSLAL-RSDGTVWAWGDNAYGQLGDTSGGRR 490

Query: 247 KTPQLIHGPWIASPVAMTAG 266
            +P  +  P +A    + AG
Sbjct: 491 PSPAQV--PGVAGATEIAAG 508



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 135/362 (37%), Gaps = 85/362 (23%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA--------- 56
           HSLAL     V+ WG +   Q          Q +P RV G++    + AC          
Sbjct: 310 HSLALRGDDSVWAWGDNAQAQ--TAQTGTSVQRVPVRVSGVSDAQAL-ACGNAFSLVGRG 366

Query: 57  -----------------GYSHCLVLTS-----TTGLWHSLALNDC--------GEVFTWG 86
                            G S    L       T G   SLA  D         G V+ WG
Sbjct: 367 DNVTLGWGANGSGQLGNGSSSVRALPGRVPSLTAGA--SLAAGDHHVFLRQADGSVWAWG 424

Query: 87  GDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLTSSGVVTCTHKENGC 145
            +T+GQLG    D    S P  V+  ++++ V+A +  S H L L S G V     +N  
Sbjct: 425 DNTYGQLG----DGTLVSRPAPVRLSSTLTSVRALSASSYHSLALRSDGTV-WAWGDNAY 479

Query: 146 G--SDPSQGVQSNLVQ----DSHTTIT-------SLNSPGELYTWGNNEYGQMGINNSNT 192
           G   D S G + +  Q       T I        +L S G ++TWG+N YGQ+G   +  
Sbjct: 480 GQLGDTSGGRRPSPAQVPGVAGATEIAAGTYHSLALRSDGTVWTWGDNSYGQLGAGATPR 539

Query: 193 TVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL-DSPKSVHKTPQL 251
               P  V  L    I  +A G  HS  L  S  +++A+G     QL D   +    P  
Sbjct: 540 GPRAPAVVPGLA--VITHVAAGLFHSLALDSS-GQVWAWGDNVYGQLGDGSTTSRNVPGR 596

Query: 252 IHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYS---GGDHSIVTVTKSSDGVLSDDFRVL 308
           + G     P  + A           +V    YS   G D S+ T  ++S+G L D     
Sbjct: 597 VSG----LPAGIQA-----------IVAGPSYSVALGADGSVWTWGENSNGQLGDGTTTA 641

Query: 309 NP 310
            P
Sbjct: 642 RP 643



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 65/132 (49%), Gaps = 21/132 (15%)

Query: 1    MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
             +G  HSLAL + G V+ WG +  GQLG       S++ P +V GL+ V  +   AG S 
Sbjct: 958  ASGAQHSLALAEGGVVWAWGANGSGQLG--DGTTTSRTRPVQVSGLSGVQGL--VAGASF 1013

Query: 61   CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
             L LT              G+V++WG ++ GQLG  + + +SQ  P     L+  S V  
Sbjct: 1014 SLALT-------------PGKVWSWGNNSAGQLGDGTLNSRSQ--PGAGPTLS--SFVAL 1056

Query: 121  CAGYSHCLVLTS 132
             AG  H +VL S
Sbjct: 1057 SAGAQHTVVLRS 1068


>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
            [Dictyostelium fasciculatum]
          Length = 2003

 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 110/259 (42%), Gaps = 60/259 (23%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  H+  +   GE+FTWG +T GQLG   A  K QS P RV+ L    ++    G  H +
Sbjct: 1202 GWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLGGEHTV 1261

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            V+  +   +H         +++WG   +GQLG         ++PKR++  A   +     
Sbjct: 1262 VIDRS---FH---------IYSWGNGKYGQLG--HGVSTPHNLPKRIEEFAGQKISSIAT 1307

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
            GY H LVL S                                       G+L+ +G+NE+
Sbjct: 1308 GYWHTLVLRSG--------------------------------------GDLFAFGSNEH 1329

Query: 183  GQMGINNSNTTVTKPQRVESL----VNLP--IALIACGANHSFVLSKSVSRLYAFGIGSA 236
            GQ+G+N+    +  P RV +        P  +  I CG +HS VL  S   +Y+FG  + 
Sbjct: 1330 GQLGLNDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHS-VLRTSHGDVYSFGANAK 1388

Query: 237  VQLDSPKSVH-KTPQLIHG 254
             QL    +   + P+LI G
Sbjct: 1389 GQLGHGSTESCRYPKLIQG 1407



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 139/310 (44%), Gaps = 54/310 (17%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            TG WH+L L   G++F +G + HGQLGL    K    IP RV            A   H 
Sbjct: 1307 TGYWHTLVLRSGGDLFAFGSNEHGQLGLNDL-KHHLPIPTRVN----------TADIHHA 1355

Query: 62   LVLTSTTGLW----HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV 117
               T  TG++    HS+     G+V+++G +  GQLG  S +  S   PK ++GL   ++
Sbjct: 1356 GQPTRVTGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTE--SCRYPKLIQGLKGKNI 1413

Query: 118  VQACAGYSHCLVLTSSGVVTC----THKENGCGSDPSQ------------GVQSNLVQDS 161
             +   G  H +V T    V C     H   G GS+ ++             V+  +    
Sbjct: 1414 KRITCGPYHTVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLY 1473

Query: 162  HT-TITS----LNSPGELYTWGNNEYGQMGINNSNTTVT----KPQRVESLVNLPIALIA 212
            HT T+T      N+ G +Y  G++E+G++GI     + +     P  + S+ +  +  +A
Sbjct: 1474 HTATLTQPMGDSNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSANVVDLA 1533

Query: 213  CGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDS--- 269
             GA  + +++ S   LY +G G+  Q+ + K+           WI + V++++ ++    
Sbjct: 1534 SGAEFNALIT-SNGALYMWGAGTHGQIGNGKN--------QDTWIPTRVSLSSEKNQNQF 1584

Query: 270  LVSHSGGLVV 279
            +V  SG  + 
Sbjct: 1585 IVDESGSTIT 1594


>gi|6957714|gb|AAF32458.1| hypothetical protein [Arabidopsis thaliana]
          Length = 314

 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 113/239 (47%), Gaps = 32/239 (13%)

Query: 25  GQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFT 84
           GQLG+ + ++K  +            VV+A   YS   V +  +G  +SLA+ D G +FT
Sbjct: 21  GQLGIGTNEEKEWAC-----------VVEALEPYS---VRSVVSGSRNSLAICDDGTMFT 66

Query: 85  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENG 144
           WG +  G LG    + K+++IP RVK LA+V + QA  G  HCL +   G      K   
Sbjct: 67  WGWNQRGTLG-HQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGKRM- 124

Query: 145 CGSDPSQGVQSNLVQDSHTTIT-------SLNSPGELYTWGNNEYGQMGINNSNTTVTKP 197
               P   +   L  ++   I        +L   G L  WGNNEYGQ+G  ++  T + P
Sbjct: 125 ----PFHTLSDLLGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPT-SHP 179

Query: 198 QRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL---DSPKSVHKTPQLIH 253
             V+ L +L +  IA G  HS  L+     +Y +G G   +L   D+ KS    PQ ++
Sbjct: 180 VPVQGLDDLTLVDIAAGGWHSTALTDK-GEVYGWGRGEHGRLGLGDNDKSSKMVPQKVN 237



 Score = 88.2 bits (217), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 120/292 (41%), Gaps = 73/292 (25%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           ++G  +SLA+ D G +FTWG +  G LG    + K+++IP RVK LA+V + QA  G  H
Sbjct: 49  VSGSRNSLAICDDGTMFTWGWNQRGTLG-HQPETKTENIPSRVKALANVKITQAAIGGWH 107

Query: 61  CLVLTS----------------------------TTGLWHSLALNDCGEVFTWGGDTHGQ 92
           CL +                                G +H+LAL + G +  WG + +GQ
Sbjct: 108 CLAVDDQGRAYAWGKRMPFHTLSDLLGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQ 167

Query: 93  LGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQG 152
           LG  + D +  S P  V+GL  +++V   AG  H   LT                     
Sbjct: 168 LG--TGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDK------------------- 206

Query: 153 VQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGI-NNSNTTVTKPQRVESLVNLPIALI 211
                              GE+Y WG  E+G++G+ +N  ++   PQ+V  L    I   
Sbjct: 207 -------------------GEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQF 247

Query: 212 ACGANHSFVLSKSVSRLYAFGIGSAVQLDSPK-SVHKTPQLIHGPWIASPVA 262
             G +      + V+      +   +++  P+ S + T +   G W A  +A
Sbjct: 248 GRGDHGRLGYGRKVTTGQPLEL--PIKIPPPEGSFNHTDEEEEGKWSAKSIA 297


>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
          Length = 369

 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 98/231 (42%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     V           
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTVNQPIPRRVTGCLQNKV----------- 206

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V+T   G    +A+ D GEV+ WG + +GQLGL S+   +Q  P RV  L  + V +   
Sbjct: 207 VVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSG--NQPTPCRVAALQGIRVQRVAC 264

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 265 GYAHTLVLTDE--------------------------------------GQVYAWGANSY 286

Query: 183 GQMGINN-SNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  +E   +  I + AC + H+         +Y +G
Sbjct: 287 GQLGTGNKSNQSYPTPVTMEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 2/84 (2%)

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           GE++TWG+N Y Q+G   +N  +   Q   +L N  +  +ACG+ HS VL+ S   ++A+
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAW 176

Query: 232 GIGSAVQLDSPKSVHK-TPQLIHG 254
           G  ++ Q+ S  +V++  P+ + G
Sbjct: 177 GYNNSGQVGSGSTVNQPIPRRVTG 200


>gi|350994396|ref|NP_001017352.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Xenopus (Silurana) tropicalis]
 gi|89272755|emb|CAJ83624.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Xenopus (Silurana) tropicalis]
          Length = 599

 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 115/256 (44%), Gaps = 32/256 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L  N+ GEV++WG + + QLG  +A             +  V+ VQ C       V+ 
Sbjct: 155 HILVCNEDGEVYSWGHNGYSQLGNGNA-------------IQGVAPVQVCMELLAKKVIQ 201

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGY 124
              G  HS+AL   GEVF WG +  GQ+G  S    +QS+P+RV   L S  VV   AG 
Sbjct: 202 VACGSHHSMALTSDGEVFCWGYNNCGQVG--SGTTANQSVPRRVSATLQSKVVVSIAAGQ 259

Query: 125 SHCLVLTSSGVVTC----THKENGCGSDPSQGVQSNLVQDSHTTIT----------SLNS 170
           S  + +T +G V C       + G G+  +Q +   LV      I           +L+ 
Sbjct: 260 SSSMAVTDNGHVYCWGYNGTGQLGIGNTGNQLMPCRLVFAHPVCIIQVVLGYAHTLALSD 319

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
            G LY WG N +GQ+GI N +   T P +V +   + + + AC + +         ++Y 
Sbjct: 320 QGVLYAWGANSHGQLGIGNKSNQ-TAPVKVGTNERM-VEVTACHSTNISAAKSQSGQVYM 377

Query: 231 FGIGSAVQLDSPKSVH 246
           +G+     L SP   H
Sbjct: 378 WGLCRGQSLLSPHLTH 393



 Score = 48.1 bits (113), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 55/103 (53%), Gaps = 3/103 (2%)

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
           N  GE+Y+WG+N Y Q+G  N+   V   Q    L+   +  +ACG++HS  L+ S   +
Sbjct: 160 NEDGEVYSWGHNGYSQLGNGNAIQGVAPVQVCMELLAKKVIQVACGSHHSMALT-SDGEV 218

Query: 229 YAFGIGSAVQLDSPKSVHKT-PQLIHGPWIAS-PVAMTAGEDS 269
           + +G  +  Q+ S  + +++ P+ +     +   V++ AG+ S
Sbjct: 219 FCWGYNNCGQVGSGTTANQSVPRRVSATLQSKVVVSIAAGQSS 261



 Score = 46.6 bits (109), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 14/84 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LAL+D G ++ WG ++HGQLG+   +K +Q+ P +V     +  V AC       
Sbjct: 310 GYAHTLALSDQGVLYAWGANSHGQLGI--GNKSNQTAPVKVGTNERMVEVTAC------- 360

Query: 63  VLTSTTGLWHSLALNDCGEVFTWG 86
               +T +  S A +  G+V+ WG
Sbjct: 361 ---HSTNI--SAAKSQSGQVYMWG 379


>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera]
 gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 132/264 (50%), Gaps = 37/264 (14%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LA+   GEV +WG + +GQLGL + +     +P++++    VSV    AG  H     
Sbjct: 132 HCLAVTMDGEVQSWGRNQNGQLGLGTTEDSL--VPQKIQAFQGVSVKMVAAGAEH----- 184

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  + A+ + GE++ WG   +G LGL   D+  + +P++V  +  V +V+   G+ 
Sbjct: 185 -------TAAVTEDGELYGWGWGRYGNLGL--GDRNDRLVPEKVSTVEGVKMVKVACGWR 235

Query: 126 HCLVLTSSGVV----TCTHKENGCGS-------DPSQGVQSNLVQD-----SHTTITSLN 169
           H + ++SSG +       + + G G           + +Q NL+ +      HT   +L 
Sbjct: 236 HTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTM--ALT 293

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           S G+LY WG N++GQ+G+ + N     P +V+      +  I+CG  H+  +++    ++
Sbjct: 294 SDGKLYGWGWNKFGQVGVGD-NVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTER-QNVF 351

Query: 230 AFGIGSAVQLDSPKSVHKT-PQLI 252
           ++G G+  QL   +S+ +  P++I
Sbjct: 352 SWGRGTNGQLGHGESIDRNIPKMI 375



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 101/248 (40%), Gaps = 31/248 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+AL     V +WG    GQLG    D + +  P  +  L    VV    G  H    +
Sbjct: 27  HSVALLSGNVVCSWGRGEDGQLG--HGDAEDRLSPTYLSALDGHEVVSVTCGADHTTAYS 84

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            +             +V++WG    G+LG    +      P+ +K L  + + Q   G S
Sbjct: 85  ES-----------FTQVYSWGWGDFGRLG--HGNSSDLFTPQPIKALHGLRIKQIACGDS 131

Query: 126 HCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSLNSP 171
           HCL +T  G V    +      G G+             QGV   +V        ++   
Sbjct: 132 HCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTED 191

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           GELY WG   YG +G+ + N  +  P++V ++  + +  +ACG  H+  +S S   LY +
Sbjct: 192 GELYGWGWGRYGNLGLGDRNDRLV-PEKVSTVEGVKMVKVACGWRHTISVSSS-GGLYTY 249

Query: 232 GIGSAVQL 239
           G     QL
Sbjct: 250 GWSKYGQL 257



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 19/116 (16%)

Query: 1   MTGLW-HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 59
           ++G W H++AL   G+++ WG +  GQ+G+   D      P +VK      VV    G+ 
Sbjct: 282 ISGGWRHTMALTSDGKLYGWGWNKFGQVGV--GDNVDHCSPVQVKFPHEQKVVHISCGWR 339

Query: 60  HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKGLAS 114
           H L +T                VF+WG  T+GQLG  ES D+   +IPK ++ L++
Sbjct: 340 HTLAVTERQ------------NVFSWGRGTNGQLGHGESIDR---NIPKMIEVLSA 380


>gi|389583915|dbj|GAB66649.1| hypothetical protein PCYB_094330, partial [Plasmodium cynomolgi
           strain B]
          Length = 371

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 120/266 (45%), Gaps = 44/266 (16%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQS-----IPKRVKGLASVSVVQACAGYSHCLVLTSTT 68
           G++FT+G +  GQLG    ++  Q+      PK V    +V     C G+ H + +    
Sbjct: 35  GKIFTYGLNDKGQLGRSIEEENDQNKNYTLTPKEVITEGNVKFKDVCCGFKHTVAVDVNN 94

Query: 69  GLWHSLALNDCGEVFTWGGDT-HGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYS 125
            L+           + WGG+   G  GL   +K++ S PK+V+   S     V  C G  
Sbjct: 95  NLYS----------WGWGGNFFKGANGLGHGNKQNLSTPKKVESFKSDDSEFVNICCGDQ 144

Query: 126 HCLVLTSSG-VVTCTHKENGCGSDPSQGVQ-----------SNL----VQDSHTTITSLN 169
           H LVLT +G V  C   E G     + G Q           +N+    +   H+   +L+
Sbjct: 145 HSLVLTKNGKVYGCGRGEFGRLGKGNHGDQLFFEEIDFFISNNITVKGISCGHSFSAALS 204

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTK----PQRVE--SLVNLPIALIACGANHSFVLSK 223
           + GE+Y WG N+YGQ+GI NS   +      P +V+   + N+ I  IACG NH    S+
Sbjct: 205 TDGEVYVWGRNDYGQLGIENSIGDLYSHEVYPNKVKYFDMENIKIKFIACGDNHMIACSE 264

Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTP 249
           +      F  GS   L+ PK++  +P
Sbjct: 265 NN---VIFFWGSRAWLE-PKAITLSP 286


>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
 gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
          Length = 5077

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 108/234 (46%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A++  GE++TWG   +G+LG    D  +Q  PK V  L+   V+Q   G     
Sbjct: 3208 GSSHSAAISSQGELYTWGLGEYGRLG--HGDNATQLKPKLVAALSGRRVIQVACGSRDA- 3264

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL + G VF+WG    G+LG      +  S P  ++ L+ + V+Q   
Sbjct: 3265 ---------QTLALTEDGAVFSWGDGDFGKLG--RGGSEGSSTPHEIERLSGIGVIQIEC 3313

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-------PSQGVQSNLVQDSHTTITSLN-- 169
            G    L LT +G V    K +    G G D       P  G++ + V   H  + +L+  
Sbjct: 3314 GAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGHRV--IHVAVGALHCL 3371

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G  N+     KP  V  L  + +  +ACG++HS  
Sbjct: 3372 AVTDAGQVYAWGDNDHGQQGSGNTFVN-KKPALVIGLDAVIVNRVACGSSHSMA 3424



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 29/236 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   G V TWG   +G+LG    D + Q  PK V+ L     +    G     
Sbjct: 4361 GSAHSAAITASGHVLTWGKGRYGRLG--HGDSEDQLRPKLVEALLGYRAIDIACG----- 4413

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L + D   V++WG   +G+LG   +D     +P +++ LA + V++   
Sbjct: 4414 -----SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD--GCKLPYKIESLAGLGVIKVEC 4466

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGS-----DPS-----QGVQSNLVQDSHTTITSL 168
            G    + LT SG V    K +    G GS      P      QG +   +        + 
Sbjct: 4467 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKKIISIATGSLHCVAC 4526

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
            +  GE++TWG+N+ GQ+G + + T + +P+ V +L    I  + CG+ H+  LS S
Sbjct: 4527 SDAGEVFTWGDNDEGQLG-DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4581



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 110/254 (43%), Gaps = 55/254 (21%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+LAL   G+VF+WG    G+LG    ++ +   P+ V+ L +  +     G S  
Sbjct: 3155 SGGKHALALTLDGKVFSWGEGEDGKLG--HGNRSTLDKPRLVEALRAKKIRDIACGSS-- 3210

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      HS A++  GE++TWG   +G+LG    D  +Q  PK V  L+   V+Q  
Sbjct: 3211 ----------HSAAISSQGELYTWGLGEYGRLG--HGDNATQLKPKLVAALSGRRVIQV- 3257

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
                                   CGS  +Q +             +L   G +++WG+ +
Sbjct: 3258 ----------------------ACGSRDAQTL-------------ALTEDGAVFSWGDGD 3282

Query: 182  YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
            +G++G   S  + T P  +E L  + +  I CGA  S  L+++   ++ +G G   +L  
Sbjct: 3283 FGKLGRGGSEGSST-PHEIERLSGIGVIQIECGAQFSLALTRA-GEVWTWGKGDYYRLGH 3340

Query: 242  PKSVH-KTPQLIHG 254
                H + PQ I G
Sbjct: 3341 GGDQHVRKPQPIAG 3354



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 111/242 (45%), Gaps = 33/242 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   G ++TWG  T+G+LG  ++D   Q +P  V  L    VV    G     
Sbjct: 705 GCSYSAAITLGGNLYTWGRGTYGRLGHGTSD--DQCLPAMVMALKDHQVVDVALG----- 757

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G  H+L L   G VF WG   +G+LG  S +  S  +P+ +  L  V  V A A
Sbjct: 758 -----SGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCN--SSLLPQLIDCLPRVQRVFAGA 810

Query: 123 GYSHCLV----LTSSGVVTCTHKE------NGCGSDPS--QGVQSNLVQDSHTTIT---S 167
            +S  L     L S G  +C   +       GC S P    G+Q   + D    +    +
Sbjct: 811 QFSLALSCEGQLYSWGKASCLGHQLVERNVQGC-SVPRLITGLQHKRIVDVAVGVAHCLA 869

Query: 168 LNSPGELYTWGNNEYGQMGINN--SNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
           L+S GE++ WG N+  Q+   +  S   + +P +V +L  LP + IAC A  S + ++S 
Sbjct: 870 LSSSGEIFGWGRNDNQQICPASVCSEPLLRQPIQV-TLPTLPASGIACTAAQSLIWTQST 928

Query: 226 SR 227
            +
Sbjct: 929 RQ 930



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 117/308 (37%), Gaps = 78/308 (25%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+      ++ WG +  GQL GLE +  K+   P   + L+ +  VQ   G      +T
Sbjct: 4207 ALSWGGASTIYGWGHNHRGQLGGLEGSRIKT---PTPCEALSLLRPVQLAGGEQSLFAVT 4263

Query: 66   S------------------------------------------TTGLWHSLALNDCGEVF 83
                                                        +G  H LAL   GEV+
Sbjct: 4264 PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVY 4323

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
             WG    G+LG    ++ S   PK V+ L  +SV     G +H   +T+SG V    K  
Sbjct: 4324 AWGEGEDGKLG--HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGR 4381

Query: 144  ----GCGSDPSQGVQSNLVQ---------------DSHTTITSLNSPGELYTWGNNEYGQ 184
                G G    Q ++  LV+               D+ T   + +    +++WG+ +YG+
Sbjct: 4382 YGRLGHGDSEDQ-LRPKLVEALLGYRAIDIACGSGDAQTLCITDDD--NVWSWGDGDYGK 4438

Query: 185  MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS-------RLYAFGIGSAV 237
            +G   S+     P ++ESL  L +  + CG+  S  L+KS +         +  G GS  
Sbjct: 4439 LGRGGSD-GCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVE 4497

Query: 238  QLDSPKSV 245
             +  PK V
Sbjct: 4498 HVRRPKKV 4505



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 72/178 (40%), Gaps = 25/178 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   GEV+TWG   + +LG    D+  +  P+ + GL    V+    G  HCL
Sbjct: 3314 GAQFSLALTRAGEVWTWGKGDYYRLG-HGGDQHVRK-PQPIAGLRGHRVIHVAVGALHCL 3371

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  S +      P  V GL +V V +   
Sbjct: 3372 AVT------------DAGQVYAWGDNDHGQQG--SGNTFVNKKPALVIGLDAVIVNRVAC 3417

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGV-----QSNLVQDSHTTITSLNSP 171
            G SH +            K      GC  DP  G      ++   Q +HTT      P
Sbjct: 3418 GSSHSMAWGLPNASLDEEKRGPVPFGCTRDPLGGSSLGIYEAETQQHTHTTPDMAGKP 3475



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 53/209 (25%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  +P ++  L    VV+  A +S         G  H+
Sbjct: 3113 GKVYACGEGTNGRLGL--GVTHNVPLPHQLPVLHQY-VVKKVAVHS---------GGKHA 3160

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL   G+VF+WG    G+LG    ++ +   P+ V+ L +  +                
Sbjct: 3161 LALTLDGKVFSWGEGEDGKLG--HGNRSTLDKPRLVEALRAKKI---------------- 3202

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                   ++  CGS             SH+   +++S GELYTWG  EYG++G +  N T
Sbjct: 3203 -------RDIACGS-------------SHSA--AISSQGELYTWGLGEYGRLG-HGDNAT 3239

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLS 222
              KP+ V +L    +  +ACG+  +  L+
Sbjct: 3240 QLKPKLVAALSGRRVIQVACGSRDAQTLA 3268



 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 96/232 (41%), Gaps = 61/232 (26%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LA++     ++WG     +LG    D  ++ +P +++ L               LV +
Sbjct: 657 HFLAVDSNFNAYSWGVGDSRRLG--HGDCHARELPTKIESLVR-------------LVKS 701

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC--AG 123
              G  +S A+   G ++TWG  T+G+LG  ++D   Q +P  V  L    VV     +G
Sbjct: 702 VYCGCSYSAAITLGGNLYTWGRGTYGRLGHGTSD--DQCLPAMVMALKDHQVVDVALGSG 759

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
            +H L LTS G+V                                      + WG+ +YG
Sbjct: 760 DAHTLCLTSEGLV--------------------------------------FAWGDGDYG 781

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
           ++G  + N+++  PQ ++ L    +  +  GA  S  LS    +LY++G  S
Sbjct: 782 KLGNGSCNSSLL-PQLIDCLPR--VQRVFAGAQFSLALS-CEGQLYSWGKAS 829



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 6/68 (8%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYS 59
            TG  H +A +D GEVFTWG +  GQLG    D    +I  P+ V  L    +V+   G +
Sbjct: 4518 TGSLHCVACSDAGEVFTWGDNDEGQLG----DGTVTAIQRPRLVAALQGKHIVKVTCGSA 4573

Query: 60   HCLVLTST 67
            H L L+++
Sbjct: 4574 HTLALSTS 4581


>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
            pisum]
          Length = 4404

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 107/232 (46%), Gaps = 29/232 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG   +D+ SQ  PK VK     ++ Q   G     
Sbjct: 2740 GSAHSAAITSDGELYTWGQGQYGRLG--HSDEVSQHTPKLVKEFVGKNITQVACGSRDA- 2796

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL+  G V++WG    G+LG   +D      P++V+ L    VVQ   
Sbjct: 2797 ---------QTLALDSEGNVYSWGDGDFGKLGRGGSD--GCCTPQKVERLVGHRVVQIEC 2845

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PSQGVQSNLVQDSHTTITSLN---- 169
            G    + LT++G V    K      G G       P+   Q  LV   H  + +L+    
Sbjct: 2846 GAQFSVALTATGQVWTWGKGEYYRLGLGRGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAV 2905

Query: 170  -SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
             + G++Y WG+N++GQ G N +     +P+ V +  N+ I  + CG++ S  
Sbjct: 2906 STQGDVYCWGDNDHGQQG-NGTTNANQEPRLVTNFNNIKINRVGCGSSQSIA 2956



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 55/253 (21%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++AL+  G+V +WG    G+LG    D  +   PK +  L +  V     G +H 
Sbjct: 2687 SGGKHAMALSLDGKVLSWGDGEDGKLG--HGDILTLDTPKLIDSLLAKRVFYIACGSAHS 2744

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS             GE++TWG   +G+LG   +D+ SQ  PK VK     ++ Q  
Sbjct: 2745 AAITSD------------GELYTWGQGQYGRLG--HSDEVSQHTPKLVKEFVGKNITQV- 2789

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
                                   CGS  +Q +             +L+S G +Y+WG+ +
Sbjct: 2790 ----------------------ACGSRDAQTL-------------ALDSEGNVYSWGDGD 2814

Query: 182  YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
            +G++G   S+   T PQ+VE LV   +  I CGA  S  L+ +  +++ +G G   +L  
Sbjct: 2815 FGKLGRGGSDGCCT-PQKVERLVGHRVVQIECGAQFSVALT-ATGQVWTWGKGEYYRLGL 2872

Query: 242  PKSVH-KTPQLIH 253
             +  H + P L++
Sbjct: 2873 GRGEHVRRPTLVN 2885



 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 115/255 (45%), Gaps = 57/255 (22%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSH 60
            +G  H LAL+  GEV+ WG    G+LGL   ++ + S P+ V+ L+   ++  AC G+  
Sbjct: 3640 SGGRHCLALSTTGEVYAWGDGDDGKLGL--GNRVTHSKPQLVQSLSDKCIIDIACGGF-- 3695

Query: 61   CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                       HS A++  G ++TWG   +G+LG    D +    PK V+GL +  VV+ 
Sbjct: 3696 -----------HSAAISRYGHLYTWGKGRYGRLG--HGDYEDYLYPKLVQGLINYHVVKV 3742

Query: 121  CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
                                    CGS  +Q +              + S   +++WG+ 
Sbjct: 3743 -----------------------ACGSGDAQTM-------------CVTSDDNVWSWGDG 3766

Query: 181  EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
            +YG++G +N + +   P ++ESL    I  I CG+  S  LS +   LY +G G   +L 
Sbjct: 3767 DYGKLG-HNISESCKLPCKIESLSGKGIIQIDCGSQFSVALSAN-GTLYTWGKGDYFRLG 3824

Query: 241  SPKSVH-KTPQLIHG 254
               S H + P+ + G
Sbjct: 3825 HGSSEHVRKPKPVSG 3839



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 118/234 (50%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AGYSH 60
            G +HS A++  G ++TWG   +G+LG    D +    PK V+GL +  VV+ AC +G + 
Sbjct: 3693 GGFHSAAISRYGHLYTWGKGRYGRLG--HGDYEDYLYPKLVQGLINYHVVKVACGSGDAQ 3750

Query: 61   CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
             + +TS   +W            +WG   +G+LG   ++  S  +P +++ L+   ++Q 
Sbjct: 3751 TMCVTSDDNVW------------SWGDGDYGKLGHNISE--SCKLPCKIESLSGKGIIQI 3796

Query: 121  CAGYSHCLVLTSSGVVTCTHKEN----GCGSD-------PSQGVQ-SNLVQDSHTT--IT 166
              G    + L+++G +    K +    G GS        P  G+Q   +VQ S  +  + 
Sbjct: 3797 DCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVL 3856

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
            +L   GE+Y WG+N+ GQ+G + +   + +P+ + +L    I  ++CG+ HSF 
Sbjct: 3857 ALTDDGEVYAWGDNDEGQLG-DGTAHPIARPRPIAALKGKRIQQVSCGSAHSFA 3909



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 103/241 (42%), Gaps = 44/241 (18%)

Query: 16   VFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            V+ WG +  GQLG L  +  K  +  + +  L  + +V    G S  L + S  G     
Sbjct: 2595 VYVWGLNDKGQLGGLNGSKVKRPTFNEALTALKPIEIV----GGSKSLFIVSNEG----- 2645

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                  +VF  G  + G+LG+    K S   P+++ GL+   +  V   +G  H + L+ 
Sbjct: 2646 ------KVFVCGDSSGGRLGIPFCGKVSS--PRQIPGLSQFVIKTVAVHSGGKHAMALSL 2697

Query: 133  SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSL------------------NSPGEL 174
             G V       G G D   G    L  D+   I SL                   S GEL
Sbjct: 2698 DGKVLSW----GDGEDGKLGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGEL 2753

Query: 175  YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS-KSVSRLYAFGI 233
            YTWG  +YG++G ++  +  T P+ V+  V   I  +ACG+  +  L+  S   +Y++G 
Sbjct: 2754 YTWGQGQYGRLGHSDEVSQHT-PKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGD 2812

Query: 234  G 234
            G
Sbjct: 2813 G 2813



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 58/222 (26%)

Query: 16   VFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            V+ WG +  GQL  ++S+  K    P     L+ +   Q   G      +TS        
Sbjct: 3546 VYVWGHNHRGQLACMDSSQVKK---PLACDSLSVLKPTQVIGGEQTMFAVTSY------- 3595

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYSHCLVLTS 132
                 G+V+  G    G+LG+   + K+  +  P+ V+GL ++  V   +G  HCL L++
Sbjct: 3596 -----GKVYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALST 3650

Query: 133  SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNT 192
            +G                                      E+Y WG+ + G++G+ N   
Sbjct: 3651 TG--------------------------------------EVYAWGDGDDGKLGLGN-RV 3671

Query: 193  TVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
            T +KPQ V+SL +  I  IACG  HS  +S+    LY +G G
Sbjct: 3672 THSKPQLVQSLSDKCIIDIACGGFHSAAISR-YGHLYTWGKG 3712



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 65/144 (45%), Gaps = 25/144 (17%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S+AL+  G ++TWG   + +LG  S++   +  PK V GL    +VQ             
Sbjct: 3803 SVALSANGTLYTWGKGDYFRLGHGSSEHVRK--PKPVSGLQGKKIVQF------------ 3848

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
            +TG  H LAL D GEV+ WG +  GQLG  +A   ++  P+ +  L    + Q   G +H
Sbjct: 3849 STGSLHVLALTDDGEVYAWGDNDEGQLGDGTAHPIAR--PRPIAALKGKRIQQVSCGSAH 3906

Query: 127  CLVLTSSGVVTCTHKENGCGSDPS 150
                 S         E  C +D S
Sbjct: 3907 SFAWAS---------EEACHTDNS 3921



 Score = 46.6 bits (109), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 56/255 (21%), Positives = 99/255 (38%), Gaps = 41/255 (16%)

Query: 8   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTST 67
           LA+   GEV++WG +  G LG       S   P+ +   + + VV    G   C  +T  
Sbjct: 505 LAVTQKGEVYSWGVNEFGALG-HGQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVTED 563

Query: 68  TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYS 125
                       G+++ WG   H               P+ VK ++   VS V   +  +
Sbjct: 564 ------------GKLYMWGKILHSS--------NCCYTPELVKSISEWHVSKVSCGSSIN 603

Query: 126 HCLVLTSSGVVTCTHKEN---GCGSDPSQGVQSNLVQD-------SHTTITS-LNSPGEL 174
           + L L+  G V      N   GC       + S +V D        H  + + ++    +
Sbjct: 604 NTLALSREGYVFSFEYRNSDRGCDDKSLNVIPSMIVFDYEIVSIYCHNDVNAVIDCANNV 663

Query: 175 YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
           +TWG      +G NNS   V +P+ V+ L    +  ++   ++   L+ +  ++Y +G  
Sbjct: 664 FTWGRGNNNMLGHNNS-FRVNRPKEVKFLSGKQVTSLSLADDYILALTDT-GQVYCWG-- 719

Query: 235 SAVQLDSPKSVHKTP 249
              QLD+  +    P
Sbjct: 720 ---QLDNENTTQCRP 731



 Score = 43.1 bits (100), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            TG  H LAL D GEV+ WG +  GQLG  +A   ++  P+ +  L    + Q   G +H 
Sbjct: 3850 TGSLHVLALTDDGEVYAWGDNDEGQLGDGTAHPIAR--PRPIAALKGKRIQQVSCGSAHS 3907

Query: 62   LVLTS 66
                S
Sbjct: 3908 FAWAS 3912



 Score = 40.8 bits (94), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
           T  ++   GE+Y+WG NE+G +G     ++   P+ + +   L + +++CG +    +++
Sbjct: 503 TYLAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVTE 562

Query: 224 SVSRLYAFG 232
              +LY +G
Sbjct: 563 D-GKLYMWG 570


>gi|395521023|ref|XP_003764621.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Sarcophilus
           harrisii]
          Length = 552

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 98/245 (40%), Gaps = 56/245 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSL L   GEVF WG +  GQ+G  S    +Q IP++V G     +    A    C 
Sbjct: 161 GSHHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRKVTGCLQNKIATTIACGQMC- 217

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ + GEV+ WG + +GQLGL S+   +Q  P R+  L  + V +   
Sbjct: 218 ----------SMAVVESGEVYVWGYNGNGQLGLGSSG--NQPTPCRIAALQGIRVHKIVC 265

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT  G                                       LY WG N Y
Sbjct: 266 GYAHTLVLTDEG--------------------------------------HLYAWGANSY 287

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G      +  
Sbjct: 288 GQLGTGNKSNQSYPTPVSVEK--DRVIEIAACHSAHTSAAKTQSGHIYMWGQCRGQSVTL 345

Query: 242 PKSVH 246
           P   H
Sbjct: 346 PHLTH 350



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 2/84 (2%)

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           GE+YTWG+N Y Q+G   +N  +       +L N  +  +ACG++HS VL+ S   ++A+
Sbjct: 119 GEVYTWGHNAYNQLGNGTTNHGLVPTHISTNLGNRKVIEVACGSHHSLVLT-SDGEVFAW 177

Query: 232 GIGSAVQLDSPKSVHK-TPQLIHG 254
           G  ++ Q+ S  + ++  P+ + G
Sbjct: 178 GYNNSGQVGSGSTANQPIPRKVTG 201


>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 826

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 113/233 (48%), Gaps = 32/233 (13%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG    G+LG +     S++ P +V+ + SV +V AC G    
Sbjct: 542 AGYRHSAAVTEDGELYTWGDGEFGRLGHDYTS--SKNFPTKVQSIESVGLV-ACGGS--- 595

Query: 62  LVLTSTTGLWHSLALNDCGE-VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                     H+LA++  G+ ++++GG  +G+LG    D   Q  PK ++ L  + + + 
Sbjct: 596 ----------HTLAVSQDGKTIWSFGGGENGKLG--HGDTNRQLKPKVIEALNGLYIRKV 643

Query: 121 CAGYSHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQD-----------SHTTITS 167
             G    L +TSSG +         GCGS     ++  LV+D             + + +
Sbjct: 644 ACGSQSSLAVTSSGQLYAWGCGAILGCGSAEYTALRPRLVEDLQSKRMVDIACGDSHVIA 703

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
           L    E+Y WGNN  GQ G  ++ + +T+P+RV  L  + +  ++ G +HS  
Sbjct: 704 LTHESEVYAWGNNAMGQCGQGHAQSPITRPKRVIGLDGVSVHQVSAGTSHSVA 756



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 119/247 (48%), Gaps = 56/247 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL   GEV++WG   +G+LG       +Q IPK VKG     VV+       C+   
Sbjct: 493 HSLALTTTGEVYSWGDGDYGKLG--HGTHSTQKIPKLVKGPLVGKVVK-------CV--- 540

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G  HS A+ + GE++TWG    G+LG +     S++ P +V+ + SV +V AC G S
Sbjct: 541 -SAGYRHSAAVTEDGELYTWGDGEFGRLGHDYTS--SKNFPTKVQSIESVGLV-ACGG-S 595

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           H L ++                           QD  T          ++++G  E G++
Sbjct: 596 HTLAVS---------------------------QDGKT----------IWSFGGGENGKL 618

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
           G  ++N  + KP+ +E+L  L I  +ACG+  S  ++ S  +LYA+G G+ +   S +  
Sbjct: 619 GHGDTNRQL-KPKVIEALNGLYIRKVACGSQSSLAVTSS-GQLYAWGCGAILGCGSAEYT 676

Query: 246 HKTPQLI 252
              P+L+
Sbjct: 677 ALRPRLV 683



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 100/233 (42%), Gaps = 68/233 (29%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKR----VKGLASVSVVQACAGYSHCLVLTSTTG 69
           G V   G  ++G+LGL   D  + S+PK+     K +  +S  +   G            
Sbjct: 447 GTVGACGKGSYGRLGL--GDSNNCSVPKKPLFDKKYVKKISSSKGSDG------------ 492

Query: 70  LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHCL 128
             HSLAL   GEV++WG   +G+LG       +Q IPK VKG     VV+   AGY H  
Sbjct: 493 --HSLALTTTGEVYSWGDGDYGKLG--HGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSA 548

Query: 129 VLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGIN 188
            +T  G                                      ELYTWG+ E+G++G +
Sbjct: 549 AVTEDG--------------------------------------ELYTWGDGEFGRLGHD 570

Query: 189 --NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
             +S    TK Q +ES     + L+ACG +H+  +S+    +++FG G   +L
Sbjct: 571 YTSSKNFPTKVQSIES-----VGLVACGGSHTLAVSQDGKTIWSFGGGENGKL 618



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 61/130 (46%), Gaps = 16/130 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G   SLA+   G+++ WG      LG  SA+  +   P+ V+ L S  +V    G SH +
Sbjct: 646 GSQSSLAVTSSGQLYAWG--CGAILGCGSAEYTALR-PRLVEDLQSKRMVDIACGDSHVI 702

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            LT  +            EV+ WG +  GQ G   A +   + PKRV GL  VSV Q  A
Sbjct: 703 ALTHES------------EVYAWGNNAMGQCGQGHA-QSPITRPKRVIGLDGVSVHQVSA 749

Query: 123 GYSHCLVLTS 132
           G SH +  T+
Sbjct: 750 GTSHSVAWTA 759


>gi|157132710|ref|XP_001662622.1| ubiquitin-protein ligase [Aedes aegypti]
 gi|108871099|gb|EAT35324.1| AAEL012500-PA [Aedes aegypti]
          Length = 1082

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 27/204 (13%)

Query: 896  PHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN------GSTRDF-LCNYPFIFDAK 948
            PH    V Y  FY   L  V ++  DY  + +   +       ST+ F    Y FI    
Sbjct: 636  PH----VPYEEFYNEPLCDVIEMDHDYLNYKNNTTSEGAFFADSTKKFSFMLYSFILTPA 691

Query: 949  AKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIREL---A 1005
             KT  L  D RI+M ++  + +F          ++N +L++++ RD+I++D + EL   A
Sbjct: 692  TKTLALYYDSRIRM-YSERRLSFLHQQLGGGIQSVNPFLKLKIRRDHIIDDALVELEMIA 750

Query: 1006 QYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKE 1065
                 D KK L             V+F GE+  D GGV +EF  L+++EI +P YGMF  
Sbjct: 751  MSNPKDLKKQL------------VVEFSGEQGIDEGGVSKEFFQLIIEEIFNPDYGMFIN 798

Query: 1066 YEETRSIWFSEDTFEDQNMYFLIG 1089
             E+T  +WF+  +FE++  + LIG
Sbjct: 799  IEDTNMVWFNSTSFENEAQFTLIG 822



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 60/92 (65%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKD 785
           E+T  +WF+  +FE++    LIG + GLAIYN  I+ + FP+ +Y+K++       DL+D
Sbjct: 800 EDTNMVWFNSTSFENEAQFTLIGIVLGLAIYNNIILAVNFPMVVYRKLMGMKGSFIDLRD 859

Query: 786 LSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
            +P L  SL+ ILD++E D+E+VF  TF+  Y
Sbjct: 860 WNPVLYNSLKSILDHQENDMEEVFMQTFKICY 891


>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
 gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
          Length = 4220

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 29/236 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +   PK+V+   S  V+    G     
Sbjct: 2569 GSSHSAAILSSGELYTWGLGEYGRLG--HGDNYTHLKPKKVQSFTSHRVIDIACGSRDA- 2625

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G V++WG    G+LG      +  S+P  V+ L    V +   
Sbjct: 2626 ---------QTLALTDDGTVWSWGDGDFGKLG--RGGSEGCSVPNPVEKLQGQGVCKVAC 2674

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTTIT---SL 168
            G    L L++SG+V    K +    G G+D          G++   + D         ++
Sbjct: 2675 GAQFSLALSTSGLVWTWGKGDYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAV 2734

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
               G+++ WG+N++GQ G NN+ T   +PQ V  L    I  +ACG++HS   ++S
Sbjct: 2735 TDSGQVFAWGDNDHGQQG-NNTTTVNRRPQLVNGLEGQKITRVACGSSHSIAWAES 2789



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 103/231 (44%), Gaps = 29/231 (12%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS  +    E++TWG   +G+LG    D + Q +PK V+ L    V+    G        
Sbjct: 3504 HSACITQNHELYTWGKGRYGRLG--HGDSEDQLLPKVVEALRGNRVIDVACG-------- 3553

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              +G   +L L D   V++WG   +G+LG   +D     IP +V+ L  + V +   G  
Sbjct: 3554 --SGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSD--GCKIPMKVESLIGLGVSKVECGSQ 3609

Query: 126  HCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSLNSP 171
              + LT SG V    K +    G G D            QG +   +        +    
Sbjct: 3610 FSVALTRSGAVYTWGKGDYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSLHCVASTDT 3669

Query: 172  GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            GE+YTWG+N+ GQ+G   +N  + +P+ V +L    I+ +ACG+ H+   S
Sbjct: 3670 GEVYTWGDNDEGQLGDGTTN-AIARPRLVTALQGKKISRVACGSAHTIAWS 3719



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 107/249 (42%), Gaps = 55/249 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL   GEV++WG    G+LG    D   +  P  V GLA   V++   G +H   +T
Sbjct: 28  HFLALTREGEVYSWGSGDGGKLG--HGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVT 85

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           S             GE++TWG   +G+LG  S++   Q +P  V GL    ++       
Sbjct: 86  SE------------GELYTWGRGNYGRLGHGSSE--DQLVPVLVSGLRGHHIIDVA---- 127

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CGS            D+HT   + +  G +++WG+ +YG++
Sbjct: 128 -------------------CGSG-----------DAHTLAAADD--GTVWSWGDGDYGKL 155

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
           G   S+     P+ +E L  L +  + CGA  S  L++  S ++ +G G   +L      
Sbjct: 156 GRGGSD-GCKNPKSIERLQGLGVCKVYCGAQFSLALTRDGS-VWTWGKGEGFRLGHGTED 213

Query: 246 H-KTPQLIH 253
           H + P+L+ 
Sbjct: 214 HVRHPKLVE 222



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 101/236 (42%), Gaps = 33/236 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS A+   GE++TWG   +G+LG  S++   Q +P  V GL    ++    G     
Sbjct: 77  GSTHSAAVTSEGELYTWGRGNYGRLGHGSSE--DQLVPVLVSGLRGHHIIDVACG----- 129

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G  H+LA  D G V++WG   +G+LG   +D      PK ++ L  + V +   
Sbjct: 130 -----SGDAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKN--PKSIERLQGLGVCKVYC 182

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNL--------VQDSHTTITSLNS---- 170
           G    L LT  G V    K  G G     G + ++        +   H    S+ S    
Sbjct: 183 GAQFSLALTRDGSVWTWGK--GEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCL 240

Query: 171 ----PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
                GE+Y WG N+ GQ+G  +      +P  V  L +  I  IACG   SF  S
Sbjct: 241 ALTDAGEVYCWGRNDQGQLGDIDCQIR-PEPTLVSGLASKGIVGIACGPAQSFAWS 295



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 122/270 (45%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++AL   G++F+WG    G+LG    ++ +   PK +    S  V     G S  
Sbjct: 2516 SGGRHAMALTIEGKLFSWGEGEDGKLG--HGNRMNCDHPKLIDTFKSSCVRDMSCGSS-- 2571

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      HS A+   GE++TWG   +G+LG    D  +   PK+V+   S  V+   
Sbjct: 2572 ----------HSAAILSSGELYTWGLGEYGRLG--HGDNYTHLKPKKVQSFTSHRVIDIA 2619

Query: 122  AGY--SHCLVLTSSGVVTC----------THKENGCG-SDPSQGVQSNLVQDSHTTIT-- 166
             G   +  L LT  G V                 GC   +P + +Q   V          
Sbjct: 2620 CGSRDAQTLALTDDGTVWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFS 2679

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L++ G ++TWG  +Y ++G  N +T V KPQ V+ L    I  +A GA H   ++ S 
Sbjct: 2680 LALSTSGLVWTWGKGDYYRLGHGN-DTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDS- 2737

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             +++A+G      Q ++  +V++ PQL++G
Sbjct: 2738 GQVFAWGDNDHGQQGNNTTTVNRRPQLVNG 2767



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 58/240 (24%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++AL+  G+V++WG    G+LG    ++ S   P+ ++ L    V+    G SH 
Sbjct: 3448 SGGKHAMALSADGDVYSWGEGDDGKLG--HGNRNSCDRPRVIEALRGKGVIDISCGGSHS 3505

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-A 120
              +T               E++TWG   +G+LG    D + Q +PK V+ L    V+  A
Sbjct: 3506 ACITQNH------------ELYTWGKGRYGRLG--HGDSEDQLLPKVVEALRGNRVIDVA 3551

Query: 121  C-AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGN 179
            C +G +  L LT    V                                      ++WG+
Sbjct: 3552 CGSGDAQTLCLTDDDCV--------------------------------------WSWGD 3573

Query: 180  NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
             +YG++G   S+     P +VESL+ L ++ + CG+  S  L++S + +Y +G G   +L
Sbjct: 3574 GDYGKLGRGGSDGCKI-PMKVESLIGLGVSKVECGSQFSVALTRSGA-VYTWGKGDYYRL 3631



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 32/264 (12%)

Query: 8    LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTST 67
             A++  G+VF  G  T+G+LGL      + ++P++++ L+S  V +          ++  
Sbjct: 2467 FAVSHDGKVFACGESTNGRLGLGPL-SANVTVPRQIENLSSFMVRK----------VSVH 2515

Query: 68   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 127
            +G  H++AL   G++F+WG    G+LG    ++ +   PK +    S  V     G SH 
Sbjct: 2516 SGGRHAMALTIEGKLFSWGEGEDGKLG--HGNRMNCDHPKLIDTFKSSCVRDMSCGSSHS 2573

Query: 128  LVLTSSGVV---------TCTHKENGCGSDPS--QGVQSNLVQD-----SHTTITSLNSP 171
              + SSG +            H +N     P   Q   S+ V D           +L   
Sbjct: 2574 AAILSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDD 2633

Query: 172  GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
            G +++WG+ ++G++G   S    + P  VE L    +  +ACGA  S  LS S   ++ +
Sbjct: 2634 GTVWSWGDGDFGKLGRGGSE-GCSVPNPVEKLQGQGVCKVACGAQFSLALSTS-GLVWTW 2691

Query: 232  GIGSAVQLDSPKSVH-KTPQLIHG 254
            G G   +L      H + PQ++ G
Sbjct: 2692 GKGDYYRLGHGNDTHVRKPQIVDG 2715



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 61/140 (43%), Gaps = 17/140 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL+  G V+TWG   + +LG    +      P+ V GL    +V    G  HCL
Sbjct: 2675 GAQFSLALSTSGLVWTWGKGDYYRLG--HGNDTHVRKPQIVDGLRGKKIVDVAVGALHCL 2732

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+VF WG + HGQ G  +     +  P+ V GL    + +   
Sbjct: 2733 AVT------------DSGQVFAWGDNDHGQQGNNTTTVNRR--PQLVNGLEGQKITRVAC 2778

Query: 123  GYSHCLVLTSSGVVT-CTHK 141
            G SH +    S + T  TH+
Sbjct: 2779 GSSHSIAWAESDLPTPATHE 2798



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 57/132 (43%), Gaps = 16/132 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G   SLAL   G V+TWG     +LG  + D      PK V+ L    VV    G  HCL
Sbjct: 183 GAQFSLALTRDGSVWTWGKGEGFRLGHGTEDHVRH--PKLVEALDGKHVVDVSVGSIHCL 240

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            LT            D GEV+ WG +  GQLG    D + +  P  V GLAS  +V    
Sbjct: 241 ALT------------DAGEVYCWGRNDQGQLG--DIDCQIRPEPTLVSGLASKGIVGIAC 286

Query: 123 GYSHCLVLTSSG 134
           G +     + +G
Sbjct: 287 GPAQSFAWSCAG 298



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 20/128 (15%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S+AL   G V+TWG   + +LG    D   +  PKRV  L    V+    G  HC+  T 
Sbjct: 3611 SVALTRSGAVYTWGKGDYYRLGHGVDDHVRR--PKRVAALQGKKVITIATGSLHCVAST- 3667

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGY 124
                       D GEV+TWG +  GQLG    D  + +I  P+ V  L    + +   G 
Sbjct: 3668 -----------DTGEVYTWGDNDEGQLG----DGTTNAIARPRLVTALQGKKISRVACGS 3712

Query: 125  SHCLVLTS 132
            +H +  ++
Sbjct: 3713 AHTIAWST 3720


>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
          Length = 1874

 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 121/278 (43%), Gaps = 70/278 (25%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L S+++V A  G+    ++TS     HS
Sbjct: 1040 GTVLACGEGSYGRLGQGNSDD-----------LHSLTIVSALQGFVVTQLVTSVGSDGHS 1088

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    V+Q   G+ H  V+T  
Sbjct: 1089 LALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVIQIACGFKHSAVVTVD 1146

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                                  G+L T+GN +YG++G+      
Sbjct: 1147 --------------------------------------GKLLTFGNGDYGRLGLGTVCNR 1168

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIH 253
             T P+RV++L N  I  +ACG NH+  +S   S  +AFG G   +L    +  K+     
Sbjct: 1169 KT-PERVKALENYHIGHVACGLNHTVCVSADGSTTWAFGDGDYGKLGLGNTSAKS----- 1222

Query: 254  GPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
                 +PV + A          GL VKK+  G   S+ 
Sbjct: 1223 -----TPVKIEA--------LSGLKVKKVACGTQFSVA 1247



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 54/218 (24%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HSLAL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    V+Q   G+ H  V+T
Sbjct: 1087 HSLALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVIQIACGFKHSAVVT 1144

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                          G++ T+G   +G+LGL +   +    P+RVK L +  +     G +
Sbjct: 1145 VD------------GKLLTFGNGDYGRLGLGTVCNR--KTPERVKALENYHIGHVACGLN 1190

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H + +++ G  T                                     + +G+ +YG++
Sbjct: 1191 HTVCVSADGSTT-------------------------------------WAFGDGDYGKL 1213

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            G+ N++   T P ++E+L  L +  +ACG   S  L++
Sbjct: 1214 GLGNTSAKST-PVKIEALSGLKVKKVACGTQFSVALTR 1250



 Score = 63.9 bits (154), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 106/239 (44%), Gaps = 35/239 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++ T+G   +G+LGL +   +    P+RVK L +  +     G +H +
Sbjct: 1136 GFKHSAVVTVDGKLLTFGNGDYGRLGLGTVCNR--KTPERVKALENYHIGHVACGLNHTV 1193

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +++           D    + +G   +G+LGL   +  ++S P +++ L+ + V +   
Sbjct: 1194 CVSA-----------DGSTTWAFGDGDYGKLGL--GNTSAKSTPVKIEALSGLKVKKVAC 1240

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQG----------------VQSNLVQDSHTTIT 166
            G    + LT  G V    ++   G   +Q                 ++  +V   HT   
Sbjct: 1241 GTQFSVALTRDGFVLTWGQDRLIGQTEAQMRGHCTPQKVTTLAGHFIEEVVVGSEHT--L 1298

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESL-VNLPIALIACGANHSFVLSKS 224
            +L S G ++ WG N  GQ+G+ ++  TV +PQ +  L  + PI  I+ G  HS   S +
Sbjct: 1299 ALTSDGNVWGWGLNADGQLGLGHTG-TVREPQLLGGLGSSEPIKQISAGRTHSAAWSGA 1356


>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
          Length = 709

 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 54/268 (20%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+LAL+  G+V+ WGG  H + G  S ++K  +  K V       ++Q+ AG     
Sbjct: 179 GDYHTLALSKEGQVYVWGGSLHNKRGDRSQERKDNAKYKPV-------LLQSFAGKK--- 228

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           +     G +HSLAL+D G +++WG    G+ G      + Q  P+R+K      + Q  A
Sbjct: 229 IKQIDCGDFHSLALDDNGTLYSWGVGEKGECG--HGKFEDQETPQRIKFFDGKIITQIEA 286

Query: 123 GYSHCLVLTSSGVVTC--THKENGCG-------------SDPSQGVQSNLVQDS------ 161
           G  H L +T+   V      +   CG             + PSQG  ++ + DS      
Sbjct: 287 GNHHTLAITADNQVYAWGDGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEIL 346

Query: 162 -----------------HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLV 204
                            HT +  L S G+++++G N+ GQ+G +N+     +P+ VE ++
Sbjct: 347 EFFKDPPKIKQIAAGEMHTLV--LTSSGQIFSFGYNQQGQLG-HNTVDNYCRPKLVEGML 403

Query: 205 NLPIALIACGANHSFVLSKSVSRLYAFG 232
           N     +A G NHS  L+   + +YA G
Sbjct: 404 NHKTVQVAAGRNHSLCLTNK-NDVYACG 430



 Score = 73.2 bits (178), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 126/317 (39%), Gaps = 75/317 (23%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSH 60
           +G  HS  + + G+++  G + H +LGLE     S+   K V+ L  + + Q AC  Y  
Sbjct: 124 SGGKHSGLVTEDGKLWMCGSNLHDKLGLEGITTGSKKTFKPVELLTQIFIKQVACGDY-- 181

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV--KGLASVSVV 118
                      H+LAL+  G+V+ WGG  H + G  S ++K  +  K V  +  A   + 
Sbjct: 182 -----------HTLALSKEGQVYVWGGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIK 230

Query: 119 QACAGYSHCLVLTSSGVV---------TCTHKENGCGSDPSQ------GVQSNLVQDSHT 163
           Q   G  H L L  +G +          C H +      P +       + + +   +H 
Sbjct: 231 QIDCGDFHSLALDDNGTLYSWGVGEKGECGHGKFEDQETPQRIKFFDGKIITQIEAGNHH 290

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLP---------------- 207
           T+ ++ +  ++Y WG+  YGQ G      T   PQ    LVN P                
Sbjct: 291 TL-AITADNQVYAWGDGRYGQCGFGEFENTAI-PQ----LVNFPSQGNNTSYLDDSVQQE 344

Query: 208 ----------IALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKT------PQL 251
                     I  IA G  H+ VL+ S  ++++FG     QL      H T      P+L
Sbjct: 345 ILEFFKDPPKIKQIAAGEMHTLVLTSS-GQIFSFGYNQQGQLG-----HNTVDNYCRPKL 398

Query: 252 IHGPWIASPVAMTAGED 268
           + G      V + AG +
Sbjct: 399 VEGMLNHKTVQVAAGRN 415



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 114/264 (43%), Gaps = 45/264 (17%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           V+++G +T G+LG  +       +P+RV+GL  + V+   +G  H  ++T    LW    
Sbjct: 86  VWSFGQNTKGELG--TGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLW---- 139

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
                     G + H +LGLE     S+   K V+ L  + + Q   G  H L L+  G 
Sbjct: 140 --------MCGSNLHDKLGLEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQ 191

Query: 136 V----TCTHKENGCGSDPSQGVQSN------LVQ-------------DSHTTITSLNSPG 172
           V       H + G   D SQ  + N      L+Q             D H+   +L+  G
Sbjct: 192 VYVWGGSLHNKRG---DRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHS--LALDDNG 246

Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
            LY+WG  E G+ G        T PQR++      I  I  G +H+  ++ + +++YA+G
Sbjct: 247 TLYSWGVGEKGECGHGKFEDQET-PQRIKFFDGKIITQIEAGNHHTLAIT-ADNQVYAWG 304

Query: 233 IGSAVQLDSPKSVHKT-PQLIHGP 255
            G   Q    +  +   PQL++ P
Sbjct: 305 DGRYGQCGFGEFENTAIPQLVNFP 328


>gi|429863195|gb|ELA37702.1| ubiquitin-protein ligase [Colletotrichum gloeosporioides Nara gc5]
          Length = 1201

 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 102/194 (52%), Gaps = 23/194 (11%)

Query: 899  GRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQ 958
            G+ +  + FY   +    D+  ++  W S R     R   C YPF+    AK+ +LE D 
Sbjct: 750  GQIIPTSDFYN-TMIDYTDLVAEFEAWESKR----GRFSFCQYPFLLSMWAKSQILEHDA 804

Query: 959  RIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYT---TNDFKKP 1015
            R Q    M +     F        + Q+L ++V R+ +V+D+++ +++     + D KK 
Sbjct: 805  RRQQ---MTKARDAFFDSIMTRRAVTQFLVLDVRRECLVDDSLKAVSEVIGSGSEDIKKG 861

Query: 1016 LKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFS 1075
            L++             F+GEE  DAGG+++E+ +LL++E+ +P +GMF   E+++  +F+
Sbjct: 862  LRI------------VFKGEEGLDAGGLKKEWFLLLVREVFNPDHGMFIYDEDSQFCYFN 909

Query: 1076 EDTFEDQNMYFLIG 1089
             ++FE  + YFL+G
Sbjct: 910  PNSFETSDQYFLVG 923



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 17/104 (16%)

Query: 726  EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL----------- 774
            E+++  +F+ ++FE  +  FL+G + GLAIYN TI+++  P   ++K+L           
Sbjct: 901  EDSQFCYFNPNSFETSDQYFLVGVVMGLAIYNSTILDVALPPFAFRKLLASAPSSSTGPS 960

Query: 775  --DEPIL---LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                P +   L+DL +  P LA  L+ +L++ + D+E+ F + F
Sbjct: 961  AHPRPSMNYTLEDLAEYRPRLAAGLRQLLEF-DGDVEETFQLDF 1003


>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
          Length = 1183

 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    V+    G    
Sbjct: 447 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVIDIACG---- 500

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                 +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 501 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 552

Query: 122 AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
            G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 553 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 612

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
               GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 613 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 668



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7   SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 294 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 350

Query: 66  STTGLW------------------------------------------HSLALNDCGEVF 83
           +   L+                                          H LAL+  GEV+
Sbjct: 351 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 410

Query: 84  TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
           +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 411 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 468

Query: 143 NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
            G    SD    ++  LV+    H  I      G+           +++WG+ +YG++G 
Sbjct: 469 YGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 528

Query: 188 NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
             S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 529 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 586

Query: 247 KTPQLIHGPWIASPVAMTAG 266
           + P+ + G      +A+  G
Sbjct: 587 RRPRQVQGLQGKKVIAIATG 606


>gi|452983308|gb|EME83066.1| hypothetical protein MYCFIDRAFT_104646, partial [Pseudocercospora
            fijiensis CIRAD86]
          Length = 1222

 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 112/228 (49%), Gaps = 25/228 (10%)

Query: 865  VLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFR 924
            + Q      +ET   S+ AG  +VS     A   G+ +  ++FY   L    D+  D+  
Sbjct: 716  IWQGKRRQTDETRVDSLVAGS-SVSPF-AKARRSGQLLHTSSFYN-TLLDYHDMIADFRV 772

Query: 925  WISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLN 984
            W + R   +     C YP       K  +LE D R QME    +     F Q  +  T++
Sbjct: 773  WETRREKFA----FCKYPIFISIGTKIKILEHDARRQMEVKAREA---YFDQVLHNRTID 825

Query: 985  QYLEVEVSRDNIVEDTIRELAQYT---TNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAG 1041
             +  + V R+ +V+D++R++++       + KK L+V+            F  EE  DAG
Sbjct: 826  GHFHLRVRRECMVDDSLRQISEAVGSGQEELKKGLRVH------------FTDEEGVDAG 873

Query: 1042 GVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            G R+E+ ++L+++I DP +GMF   +E+ + +F+ ++FE  + YFL+G
Sbjct: 874  GPRKEWFLMLVRDIFDPNHGMFVYDDESNTCYFNPNSFETSDQYFLVG 921



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 23/106 (21%)

Query: 718 NHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
           NH      +E+ + +F+ ++FE  +  FL+G L GLAIYN TI+++  P   ++K+L   
Sbjct: 891 NHGMFVYDDESNTCYFNPNSFETSDQYFLVGALLGLAIYNSTILDVALPPFAFRKLLAAA 950

Query: 778 -----------------------ILLQDLKDLSPTLAKSLQDILDY 800
                                    L DL +  P+LA  LQ +LD+
Sbjct: 951 PSSVTSAANTNVSSLTGTKGQMTYTLNDLAEFRPSLAAGLQKLLDF 996


>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
 gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
          Length = 4947

 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 109/237 (45%), Gaps = 35/237 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +Q  PK V  L    VVQ   G     
Sbjct: 3175 GSSHSAAITSSGELYTWGLGEYGRLG--HGDNCTQLKPKLVTALQDHRVVQVACGSRDA- 3231

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +L L + G VF+WG    G+LG      +  SIP +V  L  V V+Q   
Sbjct: 3232 ---------QTLCLTEDGLVFSWGDGDFGKLG--RGGSEGCSIPHQVDRLNGVGVMQIEC 3280

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-------PSQGVQSNLVQDSHTTITSLN-- 169
            G    L LT +G V    K +    G G+D       P QG++   V   H  + +L+  
Sbjct: 3281 GAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKV--IHVAVGALHCL 3338

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVT-KPQRVESLVNLPIALIACGANHSFVLS 222
                 G++Y WG+N++GQ G  + NT V  KP  V  L  + +  +ACG++HS   S
Sbjct: 3339 AVTDSGQVYAWGDNDHGQQG--SGNTIVNKKPSLVLGLDGIFVNRVACGSSHSVAWS 3393



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 125/282 (44%), Gaps = 41/282 (14%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL   G+V++WG    G+LG    D  ++ +P R+  LA   V     G S+   +T
Sbjct: 620 HVLALASSGDVYSWGSGDGGRLG--HGDTSAKELPTRIAALADRQVTGVFCGSSYSAAIT 677

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC--AG 123
           ++            GE++TWG  T+G+LG  +++ K   +P  V  L +  VV      G
Sbjct: 678 AS------------GELYTWGRGTYGRLGHGNSEDK--YVPTLVTALKAHRVVHVALGCG 723

Query: 124 YSHCLVLTSSGVVTCTHKEN--GCGSDPSQG----VQSNLVQDSHTTI--------TSLN 169
            +H L +T +G+       +    G++   G    VQ +L Q S             +L 
Sbjct: 724 DAHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALT 783

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G +YTWG    G++G  NS  +   P+ V++L    I  +A G  H   L+ S   LY
Sbjct: 784 REGTVYTWGKGHGGRLGHGNSEHSPV-PKMVQALEGKKIVDLAVGLAHCLALTAS-GELY 841

Query: 230 AFGIGSAVQLDSPKSVHKTPQLIHGPWIASP-----VAMTAG 266
            +G     Q+  P+ V + P +I  P + +P       M AG
Sbjct: 842 GWGRNDFQQI-CPECVTRDP-IITAPILTTPPTLRVAGMAAG 881



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 37/271 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++AL   G+VF+WG    G+LG    ++ +   PK ++ L +  +     G SH 
Sbjct: 3122 SGGKHAMALTLDGKVFSWGEGEDGKLG--HGNRLTLEKPKLIETLRTKRIRDIACGSSHS 3179

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE++TWG   +G+LG    D  +Q  PK V  L    VVQ  
Sbjct: 3180 AAITSS------------GELYTWGLGEYGRLG--HGDNCTQLKPKLVTALQDHRVVQVA 3225

Query: 122  AGY--SHCLVLTSSGVV----------TCTHKENGCGSDPSQ-----GVQSNLVQDSHTT 164
             G   +  L LT  G+V                 GC S P Q     GV    ++     
Sbjct: 3226 CGSRDAQTLCLTEDGLVFSWGDGDFGKLGRGGSEGC-SIPHQVDRLNGVGVMQIECGAQF 3284

Query: 165  ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              +L   GE++TWG  +Y ++G + ++  V KP  ++ L    +  +A GA H   ++ S
Sbjct: 3285 SLALTKAGEVWTWGKGDYYRLG-HGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDS 3343

Query: 225  VSRLYAFGIGSAVQLDSPKS-VHKTPQLIHG 254
              ++YA+G     Q  S  + V+K P L+ G
Sbjct: 3344 -GQVYAWGDNDHGQQGSGNTIVNKKPSLVLG 3373



 Score = 79.7 bits (195), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 118/277 (42%), Gaps = 61/277 (22%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH- 60
            +G  H LAL+  GEVF+WG    G+LG    ++ S   PK ++ L+ + VV    G +H 
Sbjct: 4183 SGGKHCLALSSDGEVFSWGEGEDGKLG--HGNRDSYDRPKLIESLSGIGVVDIACGSAHS 4240

Query: 61   -CL-----VLTSTTGLWHSLALND----------------------CGE----------- 81
             C+     VLT   G +  L   D                      CG            
Sbjct: 4241 ACITIQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDD 4300

Query: 82   --VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCT 139
              V++WG   +G+LG   +D     +P +++ LA + V +   G    + LT SG V   
Sbjct: 4301 DNVWSWGDGDYGKLGRGGSD--GCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTW 4358

Query: 140  HKEN----GCGSDPS----------QGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
             K +    G G+             QG +   +        + +  GE++TWG+N+ GQ+
Sbjct: 4359 GKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQL 4418

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            G + + + + +P+ V+SL    I  + CG+ H+  LS
Sbjct: 4419 G-DGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4454



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 113/292 (38%), Gaps = 70/292 (23%)

Query: 16   VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG------------------ 57
            +F WG +  GQLG    D      P   + L+ +  +Q   G                  
Sbjct: 4091 IFGWGHNHRGQLG--GLDGSRIKNPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGY 4148

Query: 58   ----------------------YSHCLV--LTSTTGLWHSLALNDCGEVFTWGGDTHGQL 93
                                    H ++  +   +G  H LAL+  GEVF+WG    G+L
Sbjct: 4149 GAGGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKL 4208

Query: 94   GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN----GCGSDP 149
            G    ++ S   PK ++ L+ + VV    G +H   +T  G V    K      G G   
Sbjct: 4209 G--HGNRDSYDRPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGDSE 4266

Query: 150  SQGVQSNLVQ---------------DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTV 194
             Q +Q  LV+               D+ T    +     +++WG+ +YG++G   S+   
Sbjct: 4267 DQ-LQPKLVEALLGYRAIDIACGSGDAQTLC--ITDDDNVWSWGDGDYGKLGRGGSDGCK 4323

Query: 195  TKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH 246
              P ++ESL  L +  + CG+  S  L++S S +Y +G G   +L    + H
Sbjct: 4324 V-PMKIESLAGLGVTKVECGSQFSVALTRSGS-VYTWGKGDYHRLGHGNTDH 4373



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 53/208 (25%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+++  G  T+G+LGL      +   PK+V  + S  VV+  A +S         G  H+
Sbjct: 3080 GKLYACGEGTNGRLGL--GHNNNVPTPKQVP-ILSQYVVKKVAVHS---------GGKHA 3127

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL   G+VF+WG    G+LG    ++ +   PK ++ L +  +     G SH   +TSS
Sbjct: 3128 MALTLDGKVFSWGEGEDGKLG--HGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSS 3185

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            G                                      ELYTWG  EYG++G +  N T
Sbjct: 3186 G--------------------------------------ELYTWGLGEYGRLG-HGDNCT 3206

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVL 221
              KP+ V +L +  +  +ACG+  +  L
Sbjct: 3207 QLKPKLVTALQDHRVVQVACGSRDAQTL 3234



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 20/128 (15%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S+AL   G V+TWG   + +LG  + D   +  PK+V  L    ++    G  HC+    
Sbjct: 4346 SVALTRSGSVYTWGKGDYHRLGHGNTDHVRR--PKKVAALQGKKIISIATGSLHCV---- 4399

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGY 124
                    A +D GEVFTWG +  GQLG    D    +I  P+ V+ L    +V+   G 
Sbjct: 4400 --------ACSDAGEVFTWGDNDEGQLG----DGTVSAIQRPRLVQSLQGKHIVKVICGS 4447

Query: 125  SHCLVLTS 132
            +H L L++
Sbjct: 4448 AHTLALST 4455



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 79/197 (40%), Gaps = 55/197 (27%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P +VKGL   ++VQ  A   HC          H LAL   G+V++WG    G+LG    D
Sbjct: 599 PAQVKGL-ECTIVQLAA---HCEGR-------HVLALASSGDVYSWGSGDGGRLG--HGD 645

Query: 100 KKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQ 159
             ++ +P R+  LA   V     G S+   +T+SG                         
Sbjct: 646 TSAKELPTRIAALADRQVTGVFCGSSYSAAITASG------------------------- 680

Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIA--CGANH 217
                        ELYTWG   YG++G  NS      P  V +L    +  +A  CG  H
Sbjct: 681 -------------ELYTWGRGTYGRLGHGNSEDKYV-PTLVTALKAHRVVHVALGCGDAH 726

Query: 218 SFVLSKSVSRLYAFGIG 234
           S  ++++    +A+G G
Sbjct: 727 SLCVTEA-GLAFAWGDG 742



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 100/243 (41%), Gaps = 37/243 (15%)

Query: 75   ALND--CGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 132
            +LND    +V  WG +   QLG     K    +P     L+ +  +    G     +++ 
Sbjct: 3021 SLNDEVSSKVLVWGLNDKEQLGGLKGSKVK--LPTYSSVLSQLKPIHIAGGSKSLFIVSQ 3078

Query: 133  SG-VVTCTHKENG---CGSD-----PSQG-------VQSNLVQDSHTTITSLNSPGELYT 176
             G +  C    NG    G +     P Q        V+   V        +L   G++++
Sbjct: 3079 DGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFS 3138

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
            WG  E G++G  N   T+ KP+ +E+L    I  IACG++HS  ++ S   LY +G+G  
Sbjct: 3139 WGEGEDGKLGHGN-RLTLEKPKLIETLRTKRIRDIACGSSHSAAITSS-GELYTWGLGEY 3196

Query: 237  VQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIY 283
             +L          PK V     H+  Q+  G   A  + +T  ED LV   G     K+ 
Sbjct: 3197 GRLGHGDNCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLT--EDGLVFSWGDGDFGKLG 3254

Query: 284  SGG 286
             GG
Sbjct: 3255 RGG 3257



 Score = 47.0 bits (110), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 14/92 (15%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G   S+AL   G V+TWG    G+LG    + +   +PK V+ L    +V    G +HC
Sbjct: 774 SGSQFSVALTREGTVYTWGKGHGGRLG--HGNSEHSPVPKMVQALEGKKIVDLAVGLAHC 831

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQL 93
           L LT++            GE++ WG +   Q+
Sbjct: 832 LALTAS------------GELYGWGRNDFQQI 851



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 6/67 (8%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYS 59
            TG  H +A +D GEVFTWG +  GQLG    D    +I  P+ V+ L    +V+   G +
Sbjct: 4393 TGSLHCVACSDAGEVFTWGDNDEGQLG----DGTVSAIQRPRLVQSLQGKHIVKVICGSA 4448

Query: 60   HCLVLTS 66
            H L L++
Sbjct: 4449 HTLALST 4455


>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pongo abelii]
          Length = 4581

 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 3845 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 3898

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 3899 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 3950

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 3951 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4010

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4011 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4066



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 106/233 (45%), Gaps = 29/233 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 2856 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 2912

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+ G     ++G    + K  +IP+ ++ L    V Q   
Sbjct: 2913 ---------QTLALTDEGLVFSLGDGDLWKIG-PGPEVKGCNIPQNIERLNGQGVCQIEC 2962

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTT----ITS 167
            G    L LT SGVV    K +    G GSD     P   +G++   +     +      +
Sbjct: 2963 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLA 3022

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
            +   G++Y WG+N++GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 3023 VTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3074



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEV++WG    G+LG         ++P +  K +++ S  QA     H    
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 556

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+      
Sbjct: 557 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 608

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 609 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 636

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 637 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 694

Query: 245 VH-KTPQLIHG 254
            H + P+L+ G
Sbjct: 695 EHVRYPKLLEG 705



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 114/260 (43%), Gaps = 41/260 (15%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+VF+WG    G+LG  S       +P+ ++ L +  +     G SH   LTS+      
Sbjct: 2819 GKVFSWGEGDDGKLGHFS------RMPRLIEALKTKRIRDIACGSSHSAALTSS------ 2866

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY--SHCLVLT 131
                  GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G   +  L LT
Sbjct: 2867 ------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT 2918

Query: 132  SSGVVTCTHKENGCGSDPSQGVQS-NLVQD--------------SHTTITSLNSPGELYT 176
              G+V      +     P   V+  N+ Q+                    +L   G ++T
Sbjct: 2919 DEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWT 2978

Query: 177  WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIAC-GANHSFVLSKSVSRLYAFGIGS 235
            WG  +Y ++G + S+  V KPQ VE L    I   +C GA H   ++ S  ++YA+G   
Sbjct: 2979 WGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDS-GQVYAWGDND 3036

Query: 236  -AVQLDSPKSVHKTPQLIHG 254
               Q +   +V++ P L+ G
Sbjct: 3037 HGQQGNGTTTVNRKPTLVQG 3056



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 611

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + VV+   
Sbjct: 612 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 664

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 725 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777



 Score = 72.4 bits (176), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 3692 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 3748

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 3749 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3808

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 3809 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 3866

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 3867 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 3926

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 3927 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 3984

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 3985 RRPRQVQGLQGKKVIAIATG 4004



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 17/136 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHC 61
            G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V  +C+G  HC
Sbjct: 2963 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVACSCSGALHC 3020

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
            L +T            D G+V+ WG + HGQ G  +        P  V+GL    + +  
Sbjct: 3021 LAVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVA 3066

Query: 122  AGYSHCLVLTSSGVVT 137
             G SH +  T+  V T
Sbjct: 3067 CGSSHSVAWTTVDVAT 3082



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG     
Sbjct: 484 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 528

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K +++ S  QA     H                  CGS           
Sbjct: 529 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 560

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  +
Sbjct: 561 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 615

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 616 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 652



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H LA+ D G+V+ WG + HGQ G  +        P  V+GL    + +   G SH 
Sbjct: 3015 SGALHCLAVTDSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3072

Query: 62   LVLTS 66
            +  T+
Sbjct: 3073 VAWTT 3077


>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Metaseiulus occidentalis]
          Length = 523

 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 125/279 (44%), Gaps = 31/279 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+ +   G  F++G + +GQLG      K+   P+ VK L     +    G SH L
Sbjct: 50  GDQHSVFITASGRTFSFGSNDYGQLG--HGHTKALVNPRCVKALKDKRAILVACGRSHTL 107

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V T            D  +V+ +G ++  QLG++S+     + P+ V  L  V V    A
Sbjct: 108 VAT------------DDKKVYAFGINSEHQLGVKSS-AAYHADPQLVATLNGVQVKALTA 154

Query: 123 GYSHCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTITS--------LNS 170
           G  H L L++ G+V    +  H + G G    + +   L  +      S        +N+
Sbjct: 155 GADHSLALSAKGIVYLWGSSEHGQLGLGRKKQRKLPVQLKTEGKAIAISAGAYHSAYVNT 214

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
            G LYT+G  E+G++G N +     KP +V  +  L +  +ACG +H+  L+    R Y+
Sbjct: 215 DGVLYTFGETEHGKLGTNLAPKKCRKPSKVPDIQGL-VTSVACGGSHTVALTCD-GRAYS 272

Query: 231 FGIGSAVQLDSPKSVHKT--PQLIHGPWIASPVAMTAGE 267
           FG GS  QL   + V     P LI  P       ++AG+
Sbjct: 273 FGDGSQGQLGLGQRVTHAGRPHLIQMPTGVKMARVSAGQ 311



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 25/138 (18%)

Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
           D H+    + + G  +++G+N+YGQ+G  ++   V  P+ V++L +    L+ACG +H+ 
Sbjct: 51  DQHSVF--ITASGRTFSFGSNDYGQLGHGHTKALVN-PRCVKALKDKRAILVACGRSHTL 107

Query: 220 VLSKSVSRLYAFGIGSAVQL--DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGL 277
           V +    ++YAFGI S  QL   S  + H  PQL                   V+   G+
Sbjct: 108 VATDD-KKVYAFGINSEHQLGVKSSAAYHADPQL-------------------VATLNGV 147

Query: 278 VVKKIYSGGDHSIVTVTK 295
            VK + +G DHS+    K
Sbjct: 148 QVKALTAGADHSLALSAK 165


>gi|260790705|ref|XP_002590382.1| hypothetical protein BRAFLDRAFT_121409 [Branchiostoma floridae]
 gi|229275574|gb|EEN46393.1| hypothetical protein BRAFLDRAFT_121409 [Branchiostoma floridae]
          Length = 567

 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 33/219 (15%)

Query: 888  VSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDA 947
            ++N R  +  G   +  + FY P LA   D + +Y  W +     S +  + ++P++ D 
Sbjct: 108  LANSRAHSSRGKAILPLSDFYCPVLARKMDYKHEYGNWTA-----SDQSSMLDFPYLLDP 162

Query: 948  KAKTTLLEMDQRIQM----------EHAMNQTNFYLFLQTFNPHTLN-------QYLEVE 990
              K  +L  D  +QM          +  +NQ   YL      P   +        +L +E
Sbjct: 163  SLKVRILHFDAVVQMRKEYQNAILHQARVNQAQRYLNQLNKEPSLEDGVQAATCPFLVLE 222

Query: 991  VSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLML 1050
            + R+ +++DT+ E+ Q   +  KKPLK+      Y+       GE+  D GG+++EF  +
Sbjct: 223  IRREQLIQDTLAEV-QLKRDQLKKPLKIK-----YIGG-----GEQGLDMGGLQKEFFQM 271

Query: 1051 LLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            + + + DP YGMF   EE+RS+W + ++ E    + L+G
Sbjct: 272  ITESVFDPNYGMFVYLEESRSLWINGESPESDGEFELVG 310



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 64/100 (64%), Gaps = 2/100 (2%)

Query: 719 HYGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
           +YG+  Y EE+RS+W + ++ E      L+G + GLAIYN  I+++ FP+ +YKK+  E 
Sbjct: 280 NYGMFVYLEESRSLWINGESPESDGEFELVGIILGLAIYNGVILDVHFPMTVYKKLQGET 339

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
           + L DL+D+ P LA  LQ++LDY E D+E     TF+  Y
Sbjct: 340 LELADLQDIQPILASGLQELLDY-EGDVEMDLCYTFQVSY 378


>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 1525

 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 131/271 (48%), Gaps = 46/271 (16%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL   G  ++WG + +GQLGL   D  S++ P++V  L++V  V   AG  H L LT
Sbjct: 608 HSLALARDGSFWSWGYNYYGQLGL--GDNVSKTTPRKVNALSNV--VAMAAGDRHSLALT 663

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
               LW            +WG +T+GQLGL   D   ++ P++V  +++V  V   AGY 
Sbjct: 664 LDGSLW------------SWGDNTYGQLGL--GDNDHRNTPRKVNAISNV--VAIAAGYR 707

Query: 126 HCLVLTSSGVV----TCTHKENGCGSDPSQGVQ------SNL--VQDSHTTITSLNSPGE 173
           H L LT  G V      T  + G G +  +         SN+  +   +    +++  G 
Sbjct: 708 HSLALTRDGSVWSWGNNTRGQLGLGDNDDRNTPQPVTTISNIKAIAVGNNYSIAISEEGL 767

Query: 174 LYTWGNNEYGQMGINNSNTTVTK--PQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           ++ WG N  GQ+GI    +   +  PQ+V  + N  +  ++ G++HS  L++    L+A+
Sbjct: 768 VWAWGYNCSGQLGIGTHGSLADENTPQKVIVISN--VVGLSAGSSHSIALTED-GALWAW 824

Query: 232 GIGSAVQ---------LDSPKSVHKTPQLIH 253
           G   A Q         +D+P  V ++ ++ H
Sbjct: 825 GNNEAGQIAAEEAIEYIDNPVQVFQSGEVFH 855



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 129/262 (49%), Gaps = 45/262 (17%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HSLA+   G +++WG + +GQLGL   D  S++ P++V  +++V+ + A           
Sbjct: 1097 HSLAVARDGSLWSWGYNYYGQLGL--GDNYSKTTPQKVNAISNVAAIAA----------- 1143

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
               G ++SLAL   G V++WG ++ GQLGL   D + ++ P++V+ L++V+ +   AG  
Sbjct: 1144 ---GEYYSLALTRDGSVWSWGDNSDGQLGL--GDNEDRNTPQKVEVLSNVAAI--AAGED 1196

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNS--------------- 170
            H L LT  G V    +     S    G+  N  +++   +T++++               
Sbjct: 1197 HSLALTRDGSVWSWGRN----SRGQLGLDDNDDRNTPQPVTTISNIKAIAAGNSHSFAIS 1252

Query: 171  -PGELYTWGNNEYGQMGINNSNTTVTK--PQRVESLVNLPIALIACGANHSFVLSKSVSR 227
              G  + WG N  GQ+GI  S +   +  PQ+V+ + N  +  ++ G  HS  L++    
Sbjct: 1253 EEGLAWAWGYNYDGQLGIGTSGSLANENTPQKVKVISN--VVGLSGGNYHSLALTED-GA 1309

Query: 228  LYAFGIGSAVQLDSPKSVHKTP 249
            L+A+G     Q+ S     K P
Sbjct: 1310 LWAWGDNDDGQIGSTGGDRKNP 1331



 Score = 88.2 bits (217), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 137/271 (50%), Gaps = 53/271 (19%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKS-QSIPKRVKGLASVSVVQACAGYSHCLVL 64
            H+LAL   G V++WG ++ GQLGL S+   S ++ P+++  +++V+ + AC G       
Sbjct: 1044 HALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAAI-ACGGS------ 1096

Query: 65   TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
                   HSLA+   G +++WG + +GQLGL   D  S++ P++V  +++V+ +   AG 
Sbjct: 1097 -------HSLAVARDGSLWSWGYNYYGQLGL--GDNYSKTTPQKVNAISNVAAI--AAGE 1145

Query: 125  SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTIT----------------SL 168
             + L LT  G V       G  SD   G+  N  +++   +                 +L
Sbjct: 1146 YYSLALTRDGSVWSW----GDNSDGQLGLGDNEDRNTPQKVEVLSNVAAIAAGEDHSLAL 1201

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS-KSVSR 227
               G +++WG N  GQ+G+++++   T PQ V ++ N  I  IA G +HSF +S + ++ 
Sbjct: 1202 TRDGSVWSWGRNSRGQLGLDDNDDRNT-PQPVTTISN--IKAIAAGNSHSFAISEEGLAW 1258

Query: 228  LYAF------GIGSAVQLDSPKSVHKTPQLI 252
             + +      GIG++  L    +   TPQ +
Sbjct: 1259 AWGYNYDGQLGIGTSGSL----ANENTPQKV 1285



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 122/270 (45%), Gaps = 39/270 (14%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL   G V+ WG + + QLGL   D  ++  P++   ++++  V A           
Sbjct: 78  HSLALKGDGTVWVWGRNDYNQLGL--GDDINRLAPEQAPVVSNIVSVAA----------- 124

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G   SLAL   G ++ WGG+ +GQLG+   D  ++  P +  GL+ V+ +    G  
Sbjct: 125 ---GRLFSLALASDGSLWAWGGNYYGQLGM--GDNDNRLTPSKTPGLSDVAAI--AGGDY 177

Query: 126 HCLVLTSSGVVTC----THKENGCGSDPSQG-VQSNLVQDSHTTIT------SLNSPGEL 174
           H L  T SG V       H + G   D +   VQ   + +  +         +L + G +
Sbjct: 178 HALAATQSGEVWAMGRNDHGQLGFTGDHADAPVQVAGLSNVKSVAAGEFFSLALKNDGTV 237

Query: 175 YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
           + WGNNE  Q+G   +   V  P  +  L N  I  IA G  H+  L++  S ++A+G  
Sbjct: 238 WAWGNNESAQLGTGIAGEAVATPAPIAVLSN--ITAIAAGRRHAMALAEDGS-VWAWGAN 294

Query: 235 SAVQL-----DSPKSVHKTPQLIHGPWIAS 259
            + QL     ++PK+  +   L     IAS
Sbjct: 295 GSGQLGFGDFETPKAPGRVSSLADVTAIAS 324



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 129/252 (51%), Gaps = 35/252 (13%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKS-QSIPKRVKGLASVSVVQACAGYS 59
             G  H+LAL   G V++WG ++ GQLGL +    S ++ P+++  +++V+ + AC G  
Sbjct: 550 AAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISNVAAI-ACGGS- 607

Query: 60  HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ 119
                       HSLAL   G  ++WG + +GQLGL   D  S++ P++V  L+  +VV 
Sbjct: 608 ------------HSLALARDGSFWSWGYNYYGQLGL--GDNVSKTTPRKVNALS--NVVA 651

Query: 120 ACAGYSHCLVLTSSGVV----TCTHKENGCGSDPSQGVQ------SNLV--QDSHTTITS 167
             AG  H L LT  G +      T+ + G G +  +         SN+V     +    +
Sbjct: 652 MAAGDRHSLALTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKVNAISNVVAIAAGYRHSLA 711

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G +++WGNN  GQ+G+ +++   T PQ V ++ N  I  IA G N+S  +S+    
Sbjct: 712 LTRDGSVWSWGNNTRGQLGLGDNDDRNT-PQPVTTISN--IKAIAVGNNYSIAISEE-GL 767

Query: 228 LYAFGIGSAVQL 239
           ++A+G   + QL
Sbjct: 768 VWAWGYNCSGQL 779



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 125/260 (48%), Gaps = 34/260 (13%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            SLAL   G +++WG +  GQLGL      +   P +V  L   + + A            
Sbjct: 993  SLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPPAAKIAA------------ 1040

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKS-QSIPKRVKGLASVSVVQACAGYS 125
              G  H+LAL   G V++WG ++ GQLGL S+   S ++ P+++  +++V+ + AC G S
Sbjct: 1041 --GDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAAI-ACGG-S 1096

Query: 126  HCLVLTSSGVVTCT----HKENGCGSDPSQGVQSNLVQDSHTTIT--------SLNSPGE 173
            H L +   G +       + + G G + S+     +   S+            +L   G 
Sbjct: 1097 HSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAISNVAAIAAGEYYSLALTRDGS 1156

Query: 174  LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
            +++WG+N  GQ+G+ + N     PQ+VE L N  +A IA G +HS  L++  S ++++G 
Sbjct: 1157 VWSWGDNSDGQLGLGD-NEDRNTPQKVEVLSN--VAAIAAGEDHSLALTRDGS-VWSWGR 1212

Query: 234  GSAVQLD-SPKSVHKTPQLI 252
             S  QL         TPQ +
Sbjct: 1213 NSRGQLGLDDNDDRNTPQPV 1232



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 97/235 (41%), Gaps = 58/235 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+LA    GEV+  G + HGQLG           P +V GL++V  V A   +S  L
Sbjct: 175 GDYHALAATQSGEVWAMGRNDHGQLGFTG---DHADAPVQVAGLSNVKSVAAGEFFSLAL 231

Query: 63  VLTSTTGLW-------------------------------------HSLALNDCGEVFTW 85
               T   W                                     H++AL + G V+ W
Sbjct: 232 KNDGTVWAWGNNESAQLGTGIAGEAVATPAPIAVLSNITAIAAGRRHAMALAEDGSVWAW 291

Query: 86  GGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGC 145
           G +  GQLG    D ++   P RV  LA V+ +   +G+ H L LTS GV+      NG 
Sbjct: 292 GANGSGQLGF--GDFETPKAPGRVSSLADVTAI--ASGWFHSLALTSDGVL-WAWGNNGD 346

Query: 146 G-------SDPSQGVQ----SNLVQDSHTTITSLN--SPGELYTWGNNEYGQMGI 187
           G       SD S   Q    SN V  +     SL   + G +++WG N YGQ+G+
Sbjct: 347 GRLGTDATSDQSLPAQVSSISNAVSFAGGQRHSLAIAADGSVWSWGGNAYGQLGV 401



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 58/130 (44%), Gaps = 42/130 (32%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H++AL + G V+ WG +  GQLG    D ++   P RV  LA V+ +   +G+ H L LT
Sbjct: 278 HAMALAEDGSVWAWGANGSGQLGF--GDFETPKAPGRVSSLADVTAI--ASGWFHSLALT 333

Query: 66  STTGLW--------------------------------------HSLALNDCGEVFTWGG 87
           S   LW                                      HSLA+   G V++WGG
Sbjct: 334 SDGVLWAWGNNGDGRLGTDATSDQSLPAQVSSISNAVSFAGGQRHSLAIAADGSVWSWGG 393

Query: 88  DTHGQLGLES 97
           + +GQLG+ES
Sbjct: 394 NAYGQLGVES 403



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 57/201 (28%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
             G  HSLAL   G V++WG +T GQLGL   D   ++ P+ V  ++++  +     Y  
Sbjct: 703 AAGYRHSLALTRDGSVWSWGNNTRGQLGL--GDNDDRNTPQPVTTISNIKAIAVGNNY-- 758

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADK-KSQSIPKRVKGLASVSVVQ 119
                       S+A+++ G V+ WG +  GQLG+ +      ++ P++V  +   +VV 
Sbjct: 759 ------------SIAISEEGLVWAWGYNCSGQLGIGTHGSLADENTPQKV--IVISNVVG 804

Query: 120 ACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGN 179
             AG SH + LT  G                                       L+ WGN
Sbjct: 805 LSAGSSHSIALTEDGA--------------------------------------LWAWGN 826

Query: 180 NEYGQMGINNSNTTVTKPQRV 200
           NE GQ+    +   +  P +V
Sbjct: 827 NEAGQIAAEEAIEYIDNPVQV 847


>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|194702882|gb|ACF85525.1| unknown [Zea mays]
 gi|224030327|gb|ACN34239.1| unknown [Zea mays]
 gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 443

 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 127/262 (48%), Gaps = 33/262 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LA+   GEV +WG + +GQLGL + +     +P++++   SV V    AG  H   +T
Sbjct: 129 HCLAVTMAGEVQSWGRNQNGQLGLGTTEDSL--LPQKIQAFESVCVKMIAAGAEHTAAVT 186

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                         G+++ WG   +G LGL   D+  + +P++V  +    +V    G+ 
Sbjct: 187 ED------------GDLYGWGWGRYGNLGL--GDRNDRLLPEKVSSVEGEKMVLVACGWR 232

Query: 126 HCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTIT----------SLNSP 171
           H + ++ SG +       + + G G      V   +     +TI+          +L S 
Sbjct: 233 HTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSE 292

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G+LY WG N++GQ+G+ N N   + P +V    +  I+ +ACG  H+  LS+    ++++
Sbjct: 293 GKLYGWGWNKFGQVGVGN-NDDHSSPGQVSFPEDQKISQVACGWRHTLALSEK-KNVFSW 350

Query: 232 GIGSAVQLDSPKSVHK-TPQLI 252
           G G++ QL + + V + TP LI
Sbjct: 351 GRGTSGQLGNGEIVDRNTPVLI 372



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 31/252 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS+AL     + +WG    GQLG    D + + +P  + G  + ++     G  H 
Sbjct: 20  AGASHSVALLTGNVLCSWGRGEDGQLG--HGDAEDRLVPTVLSGFDAPAITSVICGADHT 77

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +            D  +V++WG    G+LG    +      P+ VK L  + + Q  
Sbjct: 78  TAYS-----------EDELQVYSWGWGDFGRLG--HGNSSDVFTPQPVKALQGLKIKQIA 124

Query: 122 AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS----QGVQS------NLVQDSHTTITS 167
            G SHCL +T +G V    +      G G+       Q +Q+       ++        +
Sbjct: 125 CGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAA 184

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           +   G+LY WG   YG +G+ + N  +  P++V S+    + L+ACG  H+  +S S   
Sbjct: 185 VTEDGDLYGWGWGRYGNLGLGDRNDRLL-PEKVSSVEGEKMVLVACGWRHTITVSDS-GN 242

Query: 228 LYAFGIGSAVQL 239
           LY +G     QL
Sbjct: 243 LYTYGWSKYGQL 254



 Score = 55.1 bits (131), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 16/129 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++ ++D G ++T+G   +GQLG    D +   +P +V+ L   ++ Q   G+ H +
Sbjct: 230 GWRHTITVSDSGNLYTYGWSKYGQLG--HGDFEDHLVPHKVEALKDSTISQISGGWRHTM 287

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            LTS             G+++ WG +  GQ+G+ + D  S   P +V       + Q   
Sbjct: 288 ALTSE------------GKLYGWGWNKFGQVGVGNNDDHSS--PGQVSFPEDQKISQVAC 333

Query: 123 GYSHCLVLT 131
           G+ H L L+
Sbjct: 334 GWRHTLALS 342



 Score = 44.7 bits (104), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 15/95 (15%)

Query: 1   MTGLW-HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 59
           ++G W H++AL   G+++ WG +  GQ+G+ + D  S   P +V       + Q   G+ 
Sbjct: 279 ISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSS--PGQVSFPEDQKISQVACGWR 336

Query: 60  HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLG 94
                       H+LAL++   VF+WG  T GQLG
Sbjct: 337 ------------HTLALSEKKNVFSWGRGTSGQLG 359


>gi|195345961|ref|XP_002039537.1| GM23028 [Drosophila sechellia]
 gi|194134763|gb|EDW56279.1| GM23028 [Drosophila sechellia]
          Length = 725

 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 29/236 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS A+   G V TWG   +G+LG    D + Q  PK V+ L     +    G     
Sbjct: 9   GSAHSAAITASGHVLTWGKGRYGRLG--HGDSEDQLRPKLVEALLGYRAIDIACG----- 61

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +L + D   V++WG   +G+LG   +D     +P +++ LA + VV+   
Sbjct: 62  -----SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD--GCKLPYKIESLAGLGVVKVEC 114

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGS-----DPS-----QGVQSNLVQDSHTTITSL 168
           G    + LT SG V    K +    G GS      P      QG +   +        + 
Sbjct: 115 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVAC 174

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
           +  GE+YTWG+N+ GQ+G + + T + +P+ V +L    I  + CG+ H+  LS S
Sbjct: 175 SDSGEVYTWGDNDEGQLG-DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 229



 Score = 44.3 bits (103), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 6/68 (8%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYS 59
           TG  H +A +D GEV+TWG +  GQLG    D    +I  P+ V  L    +V+   G +
Sbjct: 166 TGSLHCVACSDSGEVYTWGDNDEGQLG----DGTVTAIQRPRLVAALQGKHIVKVTCGSA 221

Query: 60  HCLVLTST 67
           H L L+++
Sbjct: 222 HTLALSTS 229


>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score = 89.7 bits (221), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 33/232 (14%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LA+   GEV +WG + +GQLGL + +     +P+ ++    +SV    AG        
Sbjct: 130 HCLAVTMAGEVLSWGRNQNGQLGLGTTE--DSLLPQTIQAFEGISVKMIAAGAE------ 181

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 H+ A+ + G+++ WG   +G LGL   D+  + +P++V  +    +V    G+ 
Sbjct: 182 ------HTAAVTEDGDIYGWGWGRYGNLGL--GDRNDRFVPEKVSSVEGDKMVLVACGWR 233

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV-------QDSHTTITS--------LNS 170
           H + ++SSG +  T+  +  G       + +LV       +DS T+  S        L S
Sbjct: 234 HTITVSSSGSLY-TYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTS 292

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            G+LY WG N++GQ+G  + N     P +V       +A +ACG  H+   +
Sbjct: 293 DGKLYGWGWNKFGQVGAGD-NADHCSPAQVNFPEEQKVAQVACGWRHTLAFT 343



 Score = 86.7 bits (213), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 31/251 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL     + TWG    GQLG    D + + +P  + G  +  +     G  H  
Sbjct: 22  GASHSVALLAGNVLCTWGRGEDGQLG--HGDAEDRLVPTVISGFDAPGITSVICGADHTT 79

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +            D  +V++WG    G+LG    +      P+ VK L  + + Q   
Sbjct: 80  AYSE-----------DEHQVYSWGWGDFGRLG--HGNSTDVFTPQPVKALQGIKIKQLAC 126

Query: 123 GYSHCLVLTSSG-VVTCTHKENG---CGSDPS----------QGVQSNLVQDSHTTITSL 168
           G SHCL +T +G V++    +NG    G+             +G+   ++        ++
Sbjct: 127 GDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAV 186

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
              G++Y WG   YG +G+ + N     P++V S+    + L+ACG  H+  +S S S L
Sbjct: 187 TEDGDIYGWGWGRYGNLGLGDRNDRFV-PEKVSSVEGDKMVLVACGWRHTITVSSSGS-L 244

Query: 229 YAFGIGSAVQL 239
           Y +G     QL
Sbjct: 245 YTYGWSKYGQL 255


>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Apis florea]
          Length = 4812

 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 29/234 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   G ++TWG   +G+LG    D + Q  PK ++ L    V+    G     
Sbjct: 4100 GGHHSAAITSAGWLYTWGKGRYGRLG--HGDSEDQLTPKLIEALQDYKVIDVACG----- 4152

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L + D   V++WG   +G+LG   +D     IP +++ LA + VV+   
Sbjct: 4153 -----SGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSD--GCKIPMKIESLAGLGVVKVEC 4205

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSL 168
            G    + LT SG +    K +    G G+D            QG +   +        + 
Sbjct: 4206 GSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVAC 4265

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               GE++TWG+N+ GQ+G + + + + +P+ V +L    I  +ACG+ H+   S
Sbjct: 4266 TDKGEVFTWGDNDEGQLG-DGTTSALQRPRLVHALQGKKITRVACGSAHTLAWS 4318



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 35/269 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+LAL   G+VF+WG    G+LG    +  S   P+ ++ L S  +     G  H 
Sbjct: 3028 SGGKHALALTQDGKVFSWGEGEDGKLG--HGNSISLDKPRLIESLKSKRIRDIACGSGHS 3085

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE++TWG   +G+LG    D  +QS PK V+ L    ++Q  
Sbjct: 3086 AAITSS------------GELYTWGLGEYGRLG--HGDTATQSKPKLVQSLVGQRIIQIA 3131

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQDSHTTIT----------- 166
             G   +  + LT+ G+V      +    G   S G  + L+ D    +            
Sbjct: 3132 CGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFS 3191

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   GE++TWG  +Y ++G  N +  V KP  VE L    +  +A GA H   ++  +
Sbjct: 3192 LALTKYGEVWTWGKGDYFRLGHGNDH-HVRKPTLVEGLRGKKVIHVAVGALHCLAVT-DI 3249

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIH 253
             ++YA+G      Q +    V+K P L+H
Sbjct: 3250 GQVYAWGDNDHGQQGNGTTIVNKKPSLVH 3278



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 106/234 (45%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +QS PK V+ L    ++Q   G     
Sbjct: 3081 GSGHSAAITSSGELYTWGLGEYGRLG--HGDTATQSKPKLVQSLVGQRIIQIACGSRDA- 3137

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      ++AL   G V++WG    G+LG   +D      P  +  L  + VVQ   
Sbjct: 3138 ---------QTMALTADGLVYSWGDGDFGKLGRGGSD--GCYTPLLIDRLNGLGVVQIEC 3186

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT  G V    K +    G G+D     P+  +G++   V   H  + +L+  
Sbjct: 3187 GAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKV--IHVAVGALHCL 3244

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N +     KP  V  L +  +  ++CG++HS  
Sbjct: 3245 AVTDIGQVYAWGDNDHGQQG-NGTTIVNKKPSLVHELDDARVNRVSCGSSHSIA 3297



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 56/234 (23%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSH 60
            +G  H LAL+  G V++WG    G+LG    ++ S   PK ++ L    +V  AC G+  
Sbjct: 4047 SGGKHCLALSSEGHVYSWGEGDDGKLG--HGNRLSYDRPKLIEELLGTEIVDIACGGH-- 4102

Query: 61   CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                       HS A+   G ++TWG   +G+LG    D + Q  PK ++ L    V+  
Sbjct: 4103 -----------HSAAITSAGWLYTWGKGRYGRLG--HGDSEDQLTPKLIEALQDYKVIDV 4149

Query: 121  CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
                                    CGS  +Q +              +     +++WG+ 
Sbjct: 4150 -----------------------ACGSGDAQTL-------------CVTDDDNVWSWGDG 4173

Query: 181  EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
            +YG++G   S+     P ++ESL  L +  + CG+  S  L++S   +Y +G G
Sbjct: 4174 DYGKLGRGGSDGCKI-PMKIESLAGLGVVKVECGSQFSVALTRS-GAIYTWGKG 4225



 Score = 69.7 bits (169), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 97/222 (43%), Gaps = 54/222 (24%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+++  G  T+G+LGL   D  +   PK +  L+   V++  + +S         G  H+
Sbjct: 2986 GKLYACGEGTNGRLGL--GDDSNVCEPKPIPFLSQY-VIKKVSVHS---------GGKHA 3033

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL   G+VF+WG    G+LG    +  S   P+ ++ L S  +     G  H   +TSS
Sbjct: 3034 LALTQDGKVFSWGEGEDGKLG--HGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSS 3091

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            G                                      ELYTWG  EYG++G +    T
Sbjct: 3092 G--------------------------------------ELYTWGLGEYGRLG-HGDTAT 3112

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL-YAFGIG 234
             +KP+ V+SLV   I  IACG+  +  ++ +   L Y++G G
Sbjct: 3113 QSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDG 3154



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 59/250 (23%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL     V++WG    G+LG    D+     PK ++ L   ++     G +      
Sbjct: 516 HYLALTQDNSVYSWGNGDGGRLG--HGDRAWYDEPKLIEALVEKNITFIACGST------ 567

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
                 +S AL+  GE++TWG   +G+LG  ++D  +  IP  V  L    VV  AC +G
Sbjct: 568 ------YSAALSSNGELYTWGRGNYGRLGHGNSD--NVMIPTLVTALNGHMVVYVACGSG 619

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
            S  L +T+SG+V                                      ++WG+  YG
Sbjct: 620 DSQTLCVTASGIV--------------------------------------FSWGDGNYG 641

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPK 243
           ++G    + + T P+ V+ L+++ +A + CG   S  L+ +   +Y +G G A +L    
Sbjct: 642 KLGRGGCDGSKT-PKIVDKLLDINVAKVYCGGQFSAALT-AYGEVYTWGKGEAYRLGHGN 699

Query: 244 SVH-KTPQLI 252
             H + P++I
Sbjct: 700 EDHVRYPKII 709



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 101/235 (42%), Gaps = 43/235 (18%)

Query: 8    LALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            L+ +  G ++ WG +  GQLG LE A  K   +P   + L+++  VQ   G      +T+
Sbjct: 3947 LSWDGSGAIYGWGHNHRGQLGGLEGAKVK---LPVLCESLSALRPVQLTGGEQTLFAVTA 4003

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV--VQACAGY 124
                         G+V+  G    G+LG+   D  S  +P  ++ +  V V  V   +G 
Sbjct: 4004 D------------GKVYATGYGAVGRLGIGGTD--SVMVPTLLESIQHVFVKKVAVNSGG 4049

Query: 125  SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTI------------------T 166
             HCL L+S G V       G G D   G  + L  D    I                   
Sbjct: 4050 KHCLALSSEGHVYSW----GEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSA 4105

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
            ++ S G LYTWG   YG++G  +S   +T P+ +E+L +  +  +ACG+  +  L
Sbjct: 4106 AITSAGWLYTWGKGRYGRLGHGDSEDQLT-PKLIEALQDYKVIDVACGSGDAQTL 4159



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 98/234 (41%), Gaps = 33/234 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S AL+  GE++TWG   +G+LG  ++D  +  IP  V  L    VV    G     
Sbjct: 565 GSTYSAALSSNGELYTWGRGNYGRLGHGNSD--NVMIPTLVTALNGHMVVYVACG----- 617

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +L +   G VF+WG   +G+LG    D      PK V  L  ++V +   
Sbjct: 618 -----SGDSQTLCVTASGIVFSWGDGNYGKLGRGGCD--GSKTPKIVDKLLDINVAKVYC 670

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSD------------PSQGVQSNLVQDSHTTIT 166
           G      LT+ G V    K      G G++             ++ V+   V + H  + 
Sbjct: 671 GGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLH--VL 728

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
           +L     +Y WG N+YGQ+      T V +P    +L    +  +ACG   SF 
Sbjct: 729 ALTEDQLIYGWGRNDYGQID-PALGTVVPEPTLCPTLSGKNVIGLACGPTQSFA 781



 Score = 55.1 bits (131), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 60/142 (42%), Gaps = 20/142 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   GEV+TWG   + +LG    +      P  V+GL    V+    G  HCL
Sbjct: 3187 GAQFSLALTKYGEVWTWGKGDYFRLG--HGNDHHVRKPTLVEGLRGKKVIHVAVGALHCL 3244

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESA--DKKSQSIPKRVKGLASVSVVQA 120
             +T            D G+V+ WG + HGQ G  +   +KK    P  V  L    V + 
Sbjct: 3245 AVT------------DIGQVYAWGDNDHGQQGNGTTIVNKK----PSLVHELDDARVNRV 3288

Query: 121  CAGYSHCLVLTSSGVVTCTHKE 142
              G SH +    +   T  ++E
Sbjct: 3289 SCGSSHSIAWVLTDQPTINNQE 3310



 Score = 50.8 bits (120), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 53/215 (24%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+RV G +   ++          ++ S +   H LAL     V++WG    G+LG    D
Sbjct: 494 PQRVYGFSEKPII----------MIASHSDGTHYLALTQDNSVYSWGNGDGGRLG--HGD 541

Query: 100 KKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQ 159
           +     PK ++ L   ++                           CGS  S  + SN   
Sbjct: 542 RAWYDEPKLIEALVEKNITFI-----------------------ACGSTYSAALSSN--- 575

Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                       GELYTWG   YG++G  NS+  V  P  V +L    +  +ACG+  S 
Sbjct: 576 ------------GELYTWGRGNYGRLGHGNSD-NVMIPTLVTALNGHMVVYVACGSGDSQ 622

Query: 220 VLSKSVSRL-YAFGIGSAVQLDSPK-SVHKTPQLI 252
            L  + S + +++G G+  +L        KTP+++
Sbjct: 623 TLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIV 657



 Score = 42.0 bits (97), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            TG  H +A  D GEVFTWG +  GQLG       +   P+ V  L    + +   G +H 
Sbjct: 4257 TGSLHCVACTDKGEVFTWGDNDEGQLG--DGTTSALQRPRLVHALQGKKITRVACGSAHT 4314

Query: 62   LVLTS 66
            L  ++
Sbjct: 4315 LAWST 4319


>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 4784

 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 122/259 (47%), Gaps = 37/259 (14%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H++AL+  GEV++WG    G+LG    D  S+ +P ++     V+ + A A Y       
Sbjct: 590 HAMALSSAGEVYSWGAGEGGRLG--HGDTASKEVPTKIALEKQVTAIYAGASY------- 640

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC--AG 123
                  S A++  GE+FTWG  T+G+LG  ++D K   +P +V+ L +  VV     +G
Sbjct: 641 -------SAAVSSVGELFTWGRGTYGRLGHGNSDDK--FVPTQVQALKAYKVVDVALGSG 691

Query: 124 YSHCLVLTSSGVVTC------THKENG-CGSDP----SQGVQS--NLVQDSHTTITSLNS 170
            +H + +T  G++            NG C   P     +GV S   +   S  ++ +L+ 
Sbjct: 692 DAHSMAVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGVSSVARIYSGSQFSV-ALSY 750

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
            G LY+WG    G++G  NS  +   P+ V +L    I  +A G+ H   L+ S   LY 
Sbjct: 751 DGTLYSWGKGHGGRLGHGNSEHS-NVPKLVHALEGKKIVDVAVGSAHCLALTSS-GELYG 808

Query: 231 FGIGSAVQLDSPKSVHKTP 249
           +G     Q+  P  V + P
Sbjct: 809 WGRNDYQQI-CPSGVSRDP 826



 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 109/237 (45%), Gaps = 35/237 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +Q  PK V  L    VVQ   G     
Sbjct: 3054 GSSHSAAITSSGELYTWGLGEYGRLG--HGDNCTQLKPKLVTALQGHRVVQVACGSRDA- 3110

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +L L + G VF+WG    G+LG      +  S+P +V+ L  V VVQ   
Sbjct: 3111 ---------QTLCLTEEGLVFSWGDGDFGKLG--RGGSEGCSVPHQVERLNGVGVVQIEC 3159

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-------PSQGVQSNLVQDSHTTITSLN-- 169
            G    L LT  G V    K +    G G+D       P QG++   V   H  + +L+  
Sbjct: 3160 GAQFSLALTKIGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKV--IHVAVGALHCL 3217

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVT-KPQRVESLVNLPIALIACGANHSFVLS 222
                 G+++ WG+N++GQ G  + NT V  KP  V  L  + +  +ACG++HS   S
Sbjct: 3218 AVTDSGQVFAWGDNDHGQQG--SGNTVVNKKPNLVLGLDGVFVNRVACGSSHSVAWS 3272



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 112/268 (41%), Gaps = 64/268 (23%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H LAL+  GEVF+WG    G+LG    ++ S   PK ++ L+ + VV    G +H 
Sbjct: 4038 SGGKHCLALSSDGEVFSWGEGEDGKLG--HGNRDSYDRPKLIEALSGIGVVDIACGSAHS 4095

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKR------------- 108
              +TS             G V TWG   +G+LG    D + Q  PKR             
Sbjct: 4096 ACITSQ------------GHVLTWGKGRYGRLG--HGDSEDQLQPKRCVLRTTIMCGVGV 4141

Query: 109  --------------------VKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN----G 144
                                ++ LA + V++   G    + LT SG V    K +    G
Sbjct: 4142 TAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLG 4201

Query: 145  CGSDPS----------QGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTV 194
             G+             QG +   +        + +  GE++TWG+N+ GQ+G + + T +
Sbjct: 4202 HGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLG-DGTVTAI 4260

Query: 195  TKPQRVESLVNLPIALIACGANHSFVLS 222
             +P+ V+SL    I  + CG+ H+  LS
Sbjct: 4261 QRPRLVQSLQGKHIVKVICGSAHTLALS 4288



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 122/271 (45%), Gaps = 37/271 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++AL   G+VF+WG    G+LG    ++ +   PK ++ L +  +     G SH 
Sbjct: 3001 SGGKHAMALTLDGKVFSWGEGEDGKLG--HGNRVTLEKPKLLESLRTKRIRDIACGSSHS 3058

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE++TWG   +G+LG    D  +Q  PK V  L    VVQ  
Sbjct: 3059 AAITSS------------GELYTWGLGEYGRLG--HGDNCTQLKPKLVTALQGHRVVQVA 3104

Query: 122  AGY--SHCLVLTSSGVV----------TCTHKENGCGSDPSQ-----GVQSNLVQDSHTT 164
             G   +  L LT  G+V                 GC S P Q     GV    ++     
Sbjct: 3105 CGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGC-SVPHQVERLNGVGVVQIECGAQF 3163

Query: 165  ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              +L   GE++TWG  +Y ++G + ++  V KP  ++ L    +  +A GA H   ++ S
Sbjct: 3164 SLALTKIGEVWTWGKGDYYRLG-HGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDS 3222

Query: 225  VSRLYAFGIGSAVQLDSPKS-VHKTPQLIHG 254
              +++A+G     Q  S  + V+K P L+ G
Sbjct: 3223 -GQVFAWGDNDHGQQGSGNTVVNKKPNLVLG 3252



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 105/232 (45%), Gaps = 35/232 (15%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           PK V+GL  VSV+Q  A   HC          H++AL+  GEV++WG    G+LG    D
Sbjct: 568 PKLVEGLEGVSVIQIAA---HCEGR-------HAMALSSAGEVYSWGAGEGGRLG--HGD 615

Query: 100 KKSQSIPKRVKGLASVSVVQACAGYSHCLV----LTSSGVVTCTHKENGCGSDPSQGVQS 155
             S+ +P ++     V+ + A A YS  +     L + G  T     +G   D     Q 
Sbjct: 616 TASKEVPTKIALEKQVTAIYAGASYSAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQV 675

Query: 156 NLVQ------------DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESL 203
             ++            D+H+   ++   G L+ WG+ ++G++G N S      P ++E +
Sbjct: 676 QALKAYKVVDVALGSGDAHS--MAVTDGGLLFAWGDGDFGKLG-NGSCNGSPLPVQIEGV 732

Query: 204 VNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH-KTPQLIHG 254
            +  +A I  G+  S  LS     LY++G G   +L    S H   P+L+H 
Sbjct: 733 SS--VARIYSGSQFSVALSYD-GTLYSWGKGHGGRLGHGNSEHSNVPKLVHA 781



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 20/128 (15%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S+AL   G V+TWG   + +LG  + D   +  PK+V  L    ++    G  HC+    
Sbjct: 4180 SVALTRSGSVYTWGKGDYHRLGHGNTDHVRR--PKKVAALQGKKIISIATGSLHCV---- 4233

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGY 124
                    A +D GEVFTWG +  GQLG    D    +I  P+ V+ L    +V+   G 
Sbjct: 4234 --------ACSDSGEVFTWGDNDEGQLG----DGTVTAIQRPRLVQSLQGKHIVKVICGS 4281

Query: 125  SHCLVLTS 132
            +H L L++
Sbjct: 4282 AHTLALST 4289



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 53/208 (25%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+++  G  T+G+LGL      +   P++V  L    VV+  A +S         G  H+
Sbjct: 2959 GKLYACGEGTNGRLGL--GHNNNVPTPRQVPILNQY-VVKKVAVHS---------GGKHA 3006

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL   G+VF+WG    G+LG    ++ +   PK ++ L +  +     G SH   +TSS
Sbjct: 3007 MALTLDGKVFSWGEGEDGKLG--HGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSS 3064

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            G                                      ELYTWG  EYG++G +  N T
Sbjct: 3065 G--------------------------------------ELYTWGLGEYGRLG-HGDNCT 3085

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVL 221
              KP+ V +L    +  +ACG+  +  L
Sbjct: 3086 QLKPKLVTALQGHRVVQVACGSRDAQTL 3113



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 72/328 (21%), Positives = 117/328 (35%), Gaps = 96/328 (29%)

Query: 16   VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG------------------ 57
            +F WG +  GQLG    D     +P   + L+ +  +Q   G                  
Sbjct: 3946 IFGWGHNHRGQLG--GLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGY 4003

Query: 58   ----------------------YSHCLV--LTSTTGLWHSLALNDCGEVFTWGGDTHGQL 93
                                    H ++  +   +G  H LAL+  GEVF+WG    G+L
Sbjct: 4004 GAGGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKL 4063

Query: 94   GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN----GCGSDP 149
            G    ++ S   PK ++ L+ + VV    G +H   +TS G V    K      G G   
Sbjct: 4064 G--HGNRDSYDRPKLIEALSGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSE 4121

Query: 150  SQ-------------------------------GVQSNLVQDSHTTI------------T 166
             Q                               G +S +  +S   +             
Sbjct: 4122 DQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQFSV 4181

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +L   G +YTWG  +Y ++G  N++  V +P++V +L    I  IA G+ H    S S  
Sbjct: 4182 ALTRSGSVYTWGKGDYHRLGHGNTD-HVRRPKKVAALQGKKIISIATGSLHCVACSDS-G 4239

Query: 227  RLYAFGIGSAVQL-DSPKSVHKTPQLIH 253
             ++ +G     QL D   +  + P+L+ 
Sbjct: 4240 EVFTWGDNDEGQLGDGTVTAIQRPRLVQ 4267



 Score = 46.6 bits (109), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 14/92 (15%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G   S+AL+  G +++WG    G+LG    + +  ++PK V  L    +V    G +HC
Sbjct: 740 SGSQFSVALSYDGTLYSWGKGHGGRLG--HGNSEHSNVPKLVHALEGKKIVDVAVGSAHC 797

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQL 93
           L LTS+            GE++ WG + + Q+
Sbjct: 798 LALTSS------------GELYGWGRNDYQQI 817



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 6/67 (8%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYS 59
            TG  H +A +D GEVFTWG +  GQLG    D    +I  P+ V+ L    +V+   G +
Sbjct: 4227 TGSLHCVACSDSGEVFTWGDNDEGQLG----DGTVTAIQRPRLVQSLQGKHIVKVICGSA 4282

Query: 60   HCLVLTS 66
            H L L++
Sbjct: 4283 HTLALST 4289


>gi|390347131|ref|XP_782702.2| PREDICTED: probable E3 ubiquitin-protein ligase HECTD2-like
            [Strongylocentrotus purpuratus]
          Length = 1190

 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 115/268 (42%), Gaps = 79/268 (29%)

Query: 907  FYMPDLATVCDIRIDYFRW--ISGRPNGSTRD------FLCNYPFIFDAKAKTTLLEMDQ 958
            FY   L+   D + +Y RW   +G P  S RD       L ++PF+ D  +K  +L +D 
Sbjct: 734  FYCHQLSRDLDYQTEYHRWQLKAGLPLQSPRDEFSPVPSLLDFPFLLDPASKVHVLHLDA 793

Query: 959  RIQM----------EHAMNQTNFYLF-LQTFNPHTLNQ-------YLEVEVSRDNIVEDT 1000
             +QM          +  +NQ   YL   + F P+  +        +L +EV RD ++ DT
Sbjct: 794  VVQMRKEYQVAILHQARVNQAQKYLTDGRRFTPNLKDSIKAAMCPFLVLEVRRDYLISDT 853

Query: 1001 IRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKY 1060
            + ++ +   ND KKPLK+      Y+       GE+  D GG+++EF  L+ + + +P Y
Sbjct: 854  LAQI-RLKKNDLKKPLKIK-----YIGG-----GEQGLDMGGLQKEFFQLISEAVFNPSY 902

Query: 1061 GMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEYEETRSIWFSEDTF 1120
            GMF    E R+IW                                       I  SE + 
Sbjct: 903  GMFVSSSENRTIW---------------------------------------INGSEGST 923

Query: 1121 EDQNMYFLIGTLCGLAIYN---YTVRFP 1145
            +  + + L+GTL GLAIYN     V FP
Sbjct: 924  DSDDEFELVGTLLGLAIYNGIILDVNFP 951



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/106 (42%), Positives = 71/106 (66%), Gaps = 4/106 (3%)

Query: 720  YGI-TEYEETRSIWF--SEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDE 776
            YG+     E R+IW   SE + +  +   L+GTL GLAIYN  I+++ FP+A+YKK+ ++
Sbjct: 902  YGMFVSSSENRTIWINGSEGSTDSDDEFELVGTLLGLAIYNGIILDVNFPMAIYKKLHED 961

Query: 777  PILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSD 822
            P+ L+DL  + P+L + ++++L+Y E D+EDVF  TF+  YL M D
Sbjct: 962  PMTLEDLIGVQPSLGRGIREMLEY-EGDVEDVFCQTFQVSYLSMGD 1006


>gi|308198124|ref|XP_001387091.2| predicted protein [Scheffersomyces stipitis CBS 6054]
 gi|149389043|gb|EAZ63068.2| ubiquitin-protein ligase [Scheffersomyces stipitis CBS 6054]
          Length = 950

 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 47/218 (21%)

Query: 901  KVAYTAFYMPDLATVCDIRIDYFRWISGRP-------------------NGSTRD----- 936
            KV+  +FY   L    +I++D+  W + +                    NGSTR      
Sbjct: 487  KVSIASFYN-SLVDFVNIKLDFDSWQTNKKSKFNSSSGENDLQQVIDYINGSTRGSTLHE 545

Query: 937  ----FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPH-TLNQYLEVEV 991
                + C YPF+     K ++LE + R QME    +     F+ + +    L+ Y +V+V
Sbjct: 546  NASYYFCQYPFLITLGGKISILEYEARRQMERKAEEA----FINSLDKRVALDIYFKVKV 601

Query: 992  SRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLL 1051
             R+NIV+D+I  +    +N+ KK L+V            +F  E   D GG+++E+ +LL
Sbjct: 602  RRENIVQDSISAIKN-NSNNLKKSLRV------------QFVNEPGVDVGGLKKEWFLLL 648

Query: 1052 LKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             + + +P+ GM    E++  +WF+    E+  MY+L+G
Sbjct: 649  TRALFNPQAGMVYNIEDSNYLWFNLVPIENFEMYYLLG 686



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 11/99 (11%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKD 785
           E++  +WF+    E+  M +L+G + GLAIYN TI+++ FP+ALYK +LD+P+ L D K 
Sbjct: 664 EDSNYLWFNLVPIENFEMYYLLGAVLGLAIYNSTILDLHFPMALYKILLDKPVGLDDYKQ 723

Query: 786 LSPTLAKSLQDILDYREPDL-----------EDVFGITF 813
           L P    +L  +  Y   +L           +D+FG T+
Sbjct: 724 LFPVSYGNLMKLKKYSTEELLALDLTFEVSYQDLFGKTY 762


>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
           protein 2 [Mustela putorius furo]
          Length = 344

 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 101/245 (41%), Gaps = 56/245 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV   A    C 
Sbjct: 89  GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQLIPRRVTGCLQNKVVVNIACGQMC- 145

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ + GEV+ WG + +GQLGL S+   +Q  P R+  L  + V +   
Sbjct: 146 ----------SMAVVNTGEVYVWGYNGNGQLGLGSSG--NQPTPCRIAALQGIRVQRVAC 193

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 194 GYAHTLVLTDE--------------------------------------GQVYAWGANSY 215

Query: 183 GQMGINN-SNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G      +  
Sbjct: 216 GQLGTGNKSNQSYPAPVVVEK--DRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTL 273

Query: 242 PKSVH 246
           P   H
Sbjct: 274 PHLTH 278



 Score = 47.4 bits (111), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 2/86 (2%)

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           + GE++TWG+N Y Q+G   +N  +       +L N  +  +ACG+ HS VL+ S   ++
Sbjct: 45  TEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLT-SDGEVF 103

Query: 230 AFGIGSAVQLDSPKSVHK-TPQLIHG 254
           A+G  ++ Q+ S  + ++  P+ + G
Sbjct: 104 AWGYNNSGQVGSGSTANQLIPRRVTG 129


>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
 gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            2
 gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
          Length = 4912

 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 106/234 (45%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A++  GE++TWG   +G+LG    D  +Q  PK V  LA   VVQ   G     
Sbjct: 3133 GSSHSAAISSQGELYTWGLGEYGRLG--HGDNTTQLKPKLVTALAGRRVVQVACGSRDA- 3189

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL + G VF+WG    G+LG      +    P  ++ L+ + VVQ   
Sbjct: 3190 ---------QTLALTEDGAVFSWGDGDFGKLG--RGGSEGSDTPHEIERLSGIGVVQIEC 3238

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-------PSQGVQSNLVQDSHTTITSLN-- 169
            G    L LT +G V    K +    G G D       P  G++   V   H  + +L+  
Sbjct: 3239 GAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRV--IHVAVGALHCL 3296

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G  N+     KP  V  L  + +  +ACG++HS  
Sbjct: 3297 AVTDAGQVYAWGDNDHGQQGSGNTFVN-KKPALVIGLDAVFVNRVACGSSHSIA 3349



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 29/236 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   G V TWG   +G+LG    D + Q  PK V+ L     +    G     
Sbjct: 4196 GSAHSAAITASGHVLTWGKGRYGRLG--HGDSEDQLRPKLVEALLGYRAIDIACG----- 4248

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L + D   V++WG   +G+LG   +D     +P +++ LA + VV+   
Sbjct: 4249 -----SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD--GCKLPYKIESLAGLGVVKVEC 4301

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGS-----DPS-----QGVQSNLVQDSHTTITSL 168
            G    + LT SG V    K +    G GS      P      QG +   +        + 
Sbjct: 4302 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVAC 4361

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
            +  GE+YTWG+N+ GQ+G + + T + +P+ V +L    I  + CG+ H+  LS S
Sbjct: 4362 SDSGEVYTWGDNDEGQLG-DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4416



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 120/270 (44%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+LAL   G+VF+WG    G+LG    ++ +   P+ V+ L +  +     G S  
Sbjct: 3080 SGGKHALALTLDGKVFSWGEGEDGKLG--HGNRTTLDKPRLVEALRAKKIRDVACGSS-- 3135

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      HS A++  GE++TWG   +G+LG    D  +Q  PK V  LA   VVQ  
Sbjct: 3136 ----------HSAAISSQGELYTWGLGEYGRLG--HGDNTTQLKPKLVTALAGRRVVQVA 3183

Query: 122  AGY--SHCLVLTSSGVVTC--------THKENGCGSDPSQ------GVQSNLVQDSHTTI 165
             G   +  L LT  G V            +    GSD         G+    ++      
Sbjct: 3184 CGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFS 3243

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   GE++TWG  +Y ++G +  +  V KPQ +  L    +  +A GA H   ++ + 
Sbjct: 3244 LALTRAGEVWTWGKGDYYRLG-HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDA- 3301

Query: 226  SRLYAFGIGSAVQLDSPKS-VHKTPQLIHG 254
             ++YA+G     Q  S  + V+K P L+ G
Sbjct: 3302 GQVYAWGDNDHGQQGSGNTFVNKKPALVIG 3331



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 114/290 (39%), Gaps = 72/290 (24%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+      ++ WG +  GQL GLE +  K+   P   + L+ +  VQ   G      +T
Sbjct: 4042 ALSWGGASTIYGWGHNHRGQLGGLEGSRIKT---PTPCEALSLLRPVQLAGGEQSLFAVT 4098

Query: 66   S------------------------------------------TTGLWHSLALNDCGEVF 83
                                                        +G  H LAL   GEV+
Sbjct: 4099 PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVY 4158

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
             WG    G+LG    ++ S   PK V+ L  +SV     G +H   +T+SG V    K  
Sbjct: 4159 AWGEGEDGKLG--HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGR 4216

Query: 144  ----GCGSDPSQGVQSNLVQ---------------DSHTTITSLNSPGELYTWGNNEYGQ 184
                G G    Q ++  LV+               D+ T   + +    +++WG+ +YG+
Sbjct: 4217 YGRLGHGDSEDQ-LRPKLVEALLGYRAIDIACGSGDAQTLCITDDD--NVWSWGDGDYGK 4273

Query: 185  MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
            +G   S+     P ++ESL  L +  + CG+  S  L+KS + +Y +G G
Sbjct: 4274 LGRGGSD-GCKLPYKIESLAGLGVVKVECGSQFSVALTKSGA-VYTWGKG 4321



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 53/209 (25%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  +P ++  L    VV+  A +S         G  H+
Sbjct: 3038 GKVYACGEGTNGRLGL--GVTHNVPLPHQLPVLRQY-VVKKVAVHS---------GGKHA 3085

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL   G+VF+WG    G+LG    ++ +   P+ V+ L +  +     G SH       
Sbjct: 3086 LALTLDGKVFSWGEGEDGKLG--HGNRTTLDKPRLVEALRAKKIRDVACGSSHS------ 3137

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                             +++S GELYTWG  EYG++G +  NTT
Sbjct: 3138 --------------------------------AAISSQGELYTWGLGEYGRLG-HGDNTT 3164

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLS 222
              KP+ V +L    +  +ACG+  +  L+
Sbjct: 3165 QLKPKLVTALAGRRVVQVACGSRDAQTLA 3193



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 108/238 (45%), Gaps = 31/238 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   G + TWG  T+ +LG  ++D +  S+P  V  L+   VV    G     
Sbjct: 676 GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDR--SLPTLVVALSDHMVVDVALG----- 728

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G  HSLAL   G VF WG   +G+LG  + +   Q  P  V+ L  V  V A +
Sbjct: 729 -----SGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQ--PILVESLPRVQRVFAGS 781

Query: 123 GYSHCLV----LTSSGVVTCTHKE------NGCGSDPS--QGVQSNLVQDSHTTIT---S 167
            +S  L     L + G  TC   +       GC S P     +Q   + D   ++    +
Sbjct: 782 QFSVALSSEGQLYTWGKATCLGHQLVERSVQGC-SVPRLVSSLQHKRIVDVAVSVAHCLA 840

Query: 168 LNSPGELYTWGNNEYGQM-GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
           L+S GE++ WG N+  Q+   + S+  + +   + SL   P + IAC +  S V ++S
Sbjct: 841 LSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSLPTFPASGIACTSAQSLVWTQS 898



 Score = 57.0 bits (136), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 96/229 (41%), Gaps = 60/229 (26%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LA++     ++WG     +LG    D  ++++P ++  L      Q C    +C    
Sbjct: 627 HFLAIDSNHNAYSWGTGEDHRLG--HGDTHARAVPTKIAALE-----QHCVQSVYC---- 675

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC--AG 123
              G  +S A+   G + TWG  T+ +LG  ++D +S  +P  V  L+   VV     +G
Sbjct: 676 ---GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRS--LPTLVVALSDHMVVDVALGSG 730

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
            +H L LTS G+V                                      + WG+ +YG
Sbjct: 731 DAHSLALTSEGLV--------------------------------------FAWGDGDYG 752

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           ++G  N N ++ +P  VESL    +  +  G+  S  LS S  +LY +G
Sbjct: 753 KLGNGNCNGSL-QPILVESLPR--VQRVFAGSQFSVALS-SEGQLYTWG 797



 Score = 43.9 bits (102), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 6/68 (8%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYS 59
            TG  H +A +D GEV+TWG +  GQLG    D    +I  P+ V  L    +V+   G +
Sbjct: 4353 TGSLHCVACSDSGEVYTWGDNDEGQLG----DGTVTAIQRPRLVAALQGKHIVKVTCGSA 4408

Query: 60   HCLVLTST 67
            H L L+++
Sbjct: 4409 HTLALSTS 4416


>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
 gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
          Length = 5072

 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 106/234 (45%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A++  GE++TWG   +G+LG    D  +Q  PK V  LA   V+Q   G     
Sbjct: 3242 GSSHSAAISSQGELYTWGLGEYGRLG--HGDNSTQLKPKLVAALAGRRVIQVACGSRDA- 3298

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL + G VF+WG    G+LG      +    P  ++ L+ + V+Q   
Sbjct: 3299 ---------QTLALTEDGAVFSWGDGDFGKLG--RGGSEGSDTPHEIERLSGIGVIQIEC 3347

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-------PSQGVQSNLVQDSHTTITSLN-- 169
            G    L LT +G V    K +    G G D       P  G++   V   H  + +L+  
Sbjct: 3348 GAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRV--IHVAVGALHCL 3405

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G  N+     KP  V  L  + +  +ACG++HS  
Sbjct: 3406 AVTDAGQVYAWGDNDHGQQGSGNTFVN-KKPALVIGLDAVFVNRVACGSSHSIA 3458



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 108/236 (45%), Gaps = 29/236 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   G V TWG   +G+LG    D + Q  P+ V+ L     +    G     
Sbjct: 4383 GSAHSAAITASGHVLTWGKGRYGRLG--HGDSEDQLRPQLVEALLGYRAIDIACG----- 4435

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L +ND   V++WG   +G+LG   +D     +P +++ LA + V++   
Sbjct: 4436 -----SGDAQTLCINDDDNVWSWGDGDYGKLGRGGSD--GCKLPYKIESLAGLGVIKVEC 4488

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGS-----DPS-----QGVQSNLVQDSHTTITSL 168
            G    + LT SG V    K +    G GS      P      QG +   +        + 
Sbjct: 4489 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVAC 4548

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
            +  GE+YTWG+N+ GQ+G + + T + +P+ V +L    I  + CG+ H+  LS S
Sbjct: 4549 SDSGEVYTWGDNDEGQLG-DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4603



 Score = 83.6 bits (205), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 120/270 (44%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+LAL   G+VF+WG    G+LG    ++ +   P+ V+ L S  +     G S  
Sbjct: 3189 SGGKHALALTLDGKVFSWGEGEDGKLG--HGNRTTLDKPRLVETLRSKKIRDVACGSS-- 3244

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      HS A++  GE++TWG   +G+LG    D  +Q  PK V  LA   V+Q  
Sbjct: 3245 ----------HSAAISSQGELYTWGLGEYGRLG--HGDNSTQLKPKLVAALAGRRVIQVA 3292

Query: 122  AGY--SHCLVLTSSGVVTC--------THKENGCGSDPSQ------GVQSNLVQDSHTTI 165
             G   +  L LT  G V            +    GSD         G+    ++      
Sbjct: 3293 CGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFS 3352

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   GE++TWG  +Y ++G +  +  V KPQ +  L    +  +A GA H   ++ + 
Sbjct: 3353 LALTRAGEVWTWGKGDYYRLG-HGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDA- 3410

Query: 226  SRLYAFGIGSAVQLDSPKS-VHKTPQLIHG 254
             ++YA+G     Q  S  + V+K P L+ G
Sbjct: 3411 GQVYAWGDNDHGQQGSGNTFVNKKPALVIG 3440



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 114/290 (39%), Gaps = 72/290 (24%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+      ++ WG +  GQL GLE +  K+   P   + L+ +  VQ   G      +T
Sbjct: 4229 ALSWGGASTIYGWGHNHRGQLGGLEGSRIKT---PTPCEALSLLRPVQLAGGEQSLFAVT 4285

Query: 66   S------------------------------------------TTGLWHSLALNDCGEVF 83
                                                        +G  H LAL   GEV+
Sbjct: 4286 PDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVY 4345

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
             WG    G+LG    ++ S   PK V+ L  ++V     G +H   +T+SG V    K  
Sbjct: 4346 AWGEGEDGKLG--HGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGR 4403

Query: 144  ----GCGSDPSQGVQSNLVQ---------------DSHTTITSLNSPGELYTWGNNEYGQ 184
                G G    Q ++  LV+               D+ T    +N    +++WG+ +YG+
Sbjct: 4404 YGRLGHGDSEDQ-LRPQLVEALLGYRAIDIACGSGDAQTLC--INDDDNVWSWGDGDYGK 4460

Query: 185  MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
            +G   S+     P ++ESL  L +  + CG+  S  L+KS + +Y +G G
Sbjct: 4461 LGRGGSD-GCKLPYKIESLAGLGVIKVECGSQFSVALTKSGA-VYTWGKG 4508



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 104/239 (43%), Gaps = 33/239 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   G ++TWG  T+ +LG  ++D   Q +P  V  L    ++    G     
Sbjct: 679 GCSYSAAITCSGNLYTWGRGTYARLGHGNSD--DQPLPTVVMALTEHEIIDVALG----- 731

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G  HSL L   G V+ WG   +G+LG  + +      P  V+ L  V  V A A
Sbjct: 732 -----SGDAHSLCLTSEGHVYAWGDADYGKLG--NGNLNGSMSPVLVESLPKVQRVFAGA 784

Query: 123 GYSHCLV----LTSSGVVTC-----THKENGCGSDPS--QGVQSNLVQDSHTTIT---SL 168
            +S  L     L S G  +C       +     S P    G+Q   + D    +    +L
Sbjct: 785 QFSMALTTDGQLYSWGKASCLGHQLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLAL 844

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLV---NLPIALIACGANHSFVLSKS 224
           +S GE++ WG N+  Q  I  S+ +     RV  LV    LP + +AC A+ S + ++S
Sbjct: 845 SSCGEVFGWGRNDSQQ--ICPSSVSSEPLLRVPILVALPTLPASGVACTASQSLIWTQS 901



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 53/209 (25%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  +P ++  L    VV+  A +S         G  H+
Sbjct: 3147 GKVYACGEGTNGRLGL--GVTHNVPLPHQLPVLHQY-VVKKVAVHS---------GGKHA 3194

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL   G+VF+WG    G+LG    ++ +   P+ V+ L S  +     G SH   ++S 
Sbjct: 3195 LALTLDGKVFSWGEGEDGKLG--HGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQ 3252

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            G                                      ELYTWG  EYG++G +  N+T
Sbjct: 3253 G--------------------------------------ELYTWGLGEYGRLG-HGDNST 3273

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLS 222
              KP+ V +L    +  +ACG+  +  L+
Sbjct: 3274 QLKPKLVAALAGRRVIQVACGSRDAQTLA 3302



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 65/147 (44%), Gaps = 19/147 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   GEV+TWG   + +LG    D+  +  P+ + GL    V+    G  HCL
Sbjct: 3348 GAQFSLALTRAGEVWTWGKGDYYRLG-HGGDQHVRK-PQPIAGLRGRRVIHVAVGALHCL 3405

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  S +      P  V GL +V V +   
Sbjct: 3406 AVT------------DAGQVYAWGDNDHGQQG--SGNTFVNKKPALVIGLDAVFVNRVAC 3451

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDP 149
            G SH +     G+   T +E   G  P
Sbjct: 3452 GSSHSIAW---GLPNATLEEEKRGPVP 3475



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 95/232 (40%), Gaps = 61/232 (26%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H +A++     ++WG     +LG    D  ++++P ++      +++  C     C    
Sbjct: 631 HFMAIDINRNAYSWGNGEDHRLG--HGDTHARAVPTKI------TLLDRCVKAVFC---- 678

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC--AG 123
              G  +S A+   G ++TWG  T+ +LG  ++D   Q +P  V  L    ++     +G
Sbjct: 679 ---GCSYSAAITCSGNLYTWGRGTYARLGHGNSD--DQPLPTVVMALTEHEIIDVALGSG 733

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
            +H L LTS G V                                      Y WG+ +YG
Sbjct: 734 DAHSLCLTSEGHV--------------------------------------YAWGDADYG 755

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
           ++G  N N +++ P  VESL    +  +  GA  S  L+    +LY++G  S
Sbjct: 756 KLGNGNLNGSMS-PVLVESLPK--VQRVFAGAQFSMALTTD-GQLYSWGKAS 803



 Score = 43.9 bits (102), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 6/68 (8%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYS 59
            TG  H +A +D GEV+TWG +  GQLG    D    +I  P+ V  L    +V+   G +
Sbjct: 4540 TGSLHCVACSDSGEVYTWGDNDEGQLG----DGTVTAIQRPRLVAALQGKHIVKVTCGSA 4595

Query: 60   HCLVLTST 67
            H L L+++
Sbjct: 4596 HTLALSTS 4603


>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 752

 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 137/313 (43%), Gaps = 63/313 (20%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLA+   G V+ WG +T GQLG  + D ++  +P +V GL+ V  V   AG +H L + 
Sbjct: 159 HSLAVRSDGSVWAWGRNTSGQLGDGTRDDRA--VPVQVTGLSGV--VSVAAGGNHSLAVR 214

Query: 66  STTGLW--------------------------------------HSLALNDCGEVFTWGG 87
           S   +W                                      HSLA+   G V+ WG 
Sbjct: 215 SDGSVWAWGNNASGQLGGAPEAAYPVPWRVEDVSGVVAVAAGQYHSLAVRYDGTVWAWGD 274

Query: 88  DTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC----THKEN 143
           + +GQLG    +  S+ +PK+V GL    VV   AG+ H LV+ S G V       + + 
Sbjct: 275 NLYGQLGDGKLEGNSRWLPKQVPGLG--GVVAVSAGFYHSLVVRSDGTVWAWGNNAYGQL 332

Query: 144 GCGS-----DPSQ--GVQSNL-VQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
           G GS      P Q  GV   + V   +     +NS G L+ WG+N  GQ G + + T   
Sbjct: 333 GGGSRAHAASPVQVLGVSGAVAVAAGYRHSLVVNSDGTLWAWGSNLDGQRG-DGTLTRYP 391

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL-DSPKSVHKTPQLIHG 254
            P RV  L    +  +A G  H   L  S   ++A+G  ++ QL D  +     P+ +  
Sbjct: 392 TPGRVPGLSG--VVSVAAGGGHVLAL-LSDGTVWAWGDNASGQLGDGTRHSRWVPRQV-- 446

Query: 255 PWIASPVAMTAGE 267
           P ++  VA+ AG 
Sbjct: 447 PELSGVVAVAAGS 459



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 114/241 (47%), Gaps = 40/241 (16%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLA+   G V+T GG+ HGQLG       S+  P +V+GL+ V+ V A  G        
Sbjct: 59  HSLAVRPDGTVWTTGGNGHGQLG--DGTTLSRRTPVQVQGLSGVAAVAAGHG-------- 108

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 HSLAL   G V+ WG + +GQLG ++ D +  ++P +V GL+   VV   AG +
Sbjct: 109 ------HSLALRYDGTVWAWGNNAYGQLGDDTRDNR--TVPVQVTGLS--GVVSVVAGDT 158

Query: 126 HCLVLTSSGVV------TCTHKENGCGSD---PSQ-----GVQSNLVQDSHTTITSLNSP 171
           H L + S G V      T     +G   D   P Q     GV S     +H+   ++ S 
Sbjct: 159 HSLAVRSDGSVWAWGRNTSGQLGDGTRDDRAVPVQVTGLSGVVSVAAGGNHS--LAVRSD 216

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G ++ WGNN  GQ+G          P RVE +    +  +A G  HS  + +    ++A+
Sbjct: 217 GSVWAWGNNASGQLG-GAPEAAYPVPWRVEDVSG--VVAVAAGQYHSLAV-RYDGTVWAW 272

Query: 232 G 232
           G
Sbjct: 273 G 273



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 108/235 (45%), Gaps = 39/235 (16%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G +HSLA+   G V+ WG + +GQLG    +  S+ +PK+V GL  V  V A       
Sbjct: 255 AGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLEGNSRWLPKQVPGLGGVVAVSA------- 307

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  G +HSL +   G V+ WG + +GQLG  S  +   + P +V G++    V   
Sbjct: 308 -------GFYHSLVVRSDGTVWAWGNNAYGQLGGGS--RAHAASPVQVLGVS--GAVAVA 356

Query: 122 AGYSHCLVLTSSGVVTC------THKENGC-------GSDPS-QGVQSNLVQDSHTTITS 167
           AGY H LV+ S G +          + +G        G  P   GV S      H  + +
Sbjct: 357 AGYRHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYPTPGRVPGLSGVVSVAAGGGH--VLA 414

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
           L S G ++ WG+N  GQ+G + +  +   P++V  L      ++A  A  SF L+
Sbjct: 415 LLSDGTVWAWGDNASGQLG-DGTRHSRWVPRQVPELSG----VVAVAAGSSFSLA 464



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 119/263 (45%), Gaps = 38/263 (14%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           SLA+   G V++WG + +GQLG  S D  + S+P  V+ L+ V  V A            
Sbjct: 462 SLAVRYDGSVWSWGDNAYGQLGHGSTD--ASSVPLHVRELSEVVAVAA------------ 507

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQL--GLESADKKSQSIPKRVKGLASVSVVQACAGY 124
             G  H+LA+   G V+ WG + +GQL  G E    +  S P +V GL+   +V   A +
Sbjct: 508 --GSMHALAVRADGTVWGWGFNDYGQLGDGFEGISARRYS-PVQVPGLS--GMVSVAADF 562

Query: 125 SHCLVLTSSGVVTC----THKENGCGSDPSQGV--------QSNLVQDSHTTITSLNSPG 172
            H L + + G V      T  E G G+   + V           L+   +    ++ + G
Sbjct: 563 GHSLAVRADGTVWAWGNNTDSELGDGTTTRRLVPLRVNAPGTVALLSAGYNYSMAMRADG 622

Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
            L+ WG N  GQ+G + S T+   P RV+  V    + +A G +HS  +  S   L+A+G
Sbjct: 623 SLWAWGTNFAGQLG-DGSTTSRAVPVRVQGPVR--ASTLAAGQSHSMAVG-SDGFLWAWG 678

Query: 233 IGSAVQL-DSPKSVHKTPQLIHG 254
                QL D   + H  P  + G
Sbjct: 679 FNFEGQLGDGTLTHHALPVRVPG 701



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 43/211 (20%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLA+   G V+ WG +T  +LG  +  ++   +P RV    +V+++   AGY++     
Sbjct: 564 HSLAVRADGTVWAWGNNTDSELGDGTTTRRL--VPLRVNAPGTVALL--SAGYNY----- 614

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  S+A+   G ++ WG +  GQLG  S    S+++P RV+G    S +   AG S
Sbjct: 615 -------SMAMRADGSLWAWGTNFAGQLGDGS--TTSRAVPVRVQGPVRASTL--AAGQS 663

Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSDPSQ--GVQSNLVQDSHTTIT-SL 168
           H + + S G +              T TH      + P +  G+   +  D    ++ ++
Sbjct: 664 HSMAVGSDGFLWAWGFNFEGQLGDGTLTHH-----ALPVRVPGMSGVVAVDVTLNLSLAV 718

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQR 199
            S G L+ WGNN+ GQ+G   S T VT   R
Sbjct: 719 RSDGSLWAWGNNDVGQLGTQPS-TYVTTAVR 748


>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
 gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
          Length = 5087

 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 107/234 (45%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A++  GE++TWG   +G+LG    D  +Q  PK V  LA   VVQ   G     
Sbjct: 3221 GSSHSAAISSQGELYTWGLGEYGRLG--HGDNATQLKPKLVAALAGRRVVQVACGSRDA- 3277

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL + G VF+WG    G+LG      +    P  ++ L+ + V+Q   
Sbjct: 3278 ---------QTLALTEDGAVFSWGDGDFGKLG--RGGSEGSDTPHEIERLSGIGVIQIEC 3326

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-------PSQGVQSNLVQDSHTTITSLN-- 169
            G    L LT +G V    K +    G G D       P  G++   V   H  + +L+  
Sbjct: 3327 GAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRV--IHVAVGALHCL 3384

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G  N+     KP  V  L ++ +  +ACG++HS  
Sbjct: 3385 AVTDSGQVYAWGDNDHGQQGSGNTFVN-KKPALVIGLDDVFVNRVACGSSHSIA 3437



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 108/236 (45%), Gaps = 29/236 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   G+V TWG   +G+LG    D + Q  PK V+ L     +    G     
Sbjct: 4371 GSAHSAAITASGQVLTWGKGRYGRLG--HGDSEDQLRPKLVEALLGYRAIDIACG----- 4423

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L + D   V++WG   +G+LG   +D     +P +++ LA + V++   
Sbjct: 4424 -----SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD--GCKLPYKIESLAGLGVIKVEC 4476

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGS-----DPS-----QGVQSNLVQDSHTTITSL 168
            G    + LT SG V    K +    G GS      P      QG +   +        + 
Sbjct: 4477 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVAC 4536

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
            +  GE+YTWG+N+ GQ+G + + T + +P+ V +L    I  + CG+ H+  LS S
Sbjct: 4537 SDSGEVYTWGDNDEGQLG-DGTVTAIQRPRLVSALQGKHIVKVTCGSAHTLALSTS 4591



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 121/270 (44%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+LAL   G+VF+WG    G+LG    ++ +   P++V+ L +  +     G S  
Sbjct: 3168 SGGKHALALTLDGKVFSWGEGEDGKLG--HGNRTTLDKPRQVEALRAKKIRDVACGSS-- 3223

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      HS A++  GE++TWG   +G+LG    D  +Q  PK V  LA   VVQ  
Sbjct: 3224 ----------HSAAISSQGELYTWGLGEYGRLG--HGDNATQLKPKLVAALAGRRVVQVA 3271

Query: 122  AGY--SHCLVLTSSGVVTC--------THKENGCGSDPSQ------GVQSNLVQDSHTTI 165
             G   +  L LT  G V            +    GSD         G+    ++      
Sbjct: 3272 CGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFS 3331

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   GE++TWG  +Y ++G +  +  V KPQ +  L    +  +A GA H   ++ S 
Sbjct: 3332 LALTRAGEVWTWGKGDYYRLG-HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDS- 3389

Query: 226  SRLYAFGIGSAVQLDSPKS-VHKTPQLIHG 254
             ++YA+G     Q  S  + V+K P L+ G
Sbjct: 3390 GQVYAWGDNDHGQQGSGNTFVNKKPALVIG 3419



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 110/240 (45%), Gaps = 35/240 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S  +   G + TWG  T+ +LG  ++D +   +P  V  LA  +VV    G     
Sbjct: 691 GCTYSAVITCGGNLLTWGRGTYARLGHGNSDDR--CLPTLVAALAEHTVVDVALG----- 743

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G  HSLAL   G VF WG   +G+LG  + +   Q  P  V+ L  V  + A +
Sbjct: 744 -----SGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQ--PILVESLPRVQRIFAGS 796

Query: 123 GYSHCLVLTSSGVV------TCTHKE------NGCGSDPS--QGVQSNLVQDSHTTIT-- 166
            YS  + L+S G V      TC   +       GC S P     +Q   + D    +   
Sbjct: 797 QYS--VALSSEGQVYTWGKATCLGHQLVERSVQGC-SVPRLVSSLQHKRIVDMAVGVAHC 853

Query: 167 -SLNSPGELYTWGNNEYGQMGINN-SNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
            +L+S GE++ WG N+  Q+  ++ S+  + +   + +L  LP + IAC A  S + ++S
Sbjct: 854 LALSSSGEVFGWGRNDCQQVCPSSVSSEPLLRSPILVALPTLPASGIACTAGQSLIWTQS 913



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 114/290 (39%), Gaps = 72/290 (24%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+      ++ WG +  GQL GLE +  K+   P   + L+ +  VQ   G      +T
Sbjct: 4217 ALSWGGASTIYGWGHNHRGQLGGLEGSRIKT---PTPCEALSLLRPVQLAGGEQSLFAVT 4273

Query: 66   S------------------------------------------TTGLWHSLALNDCGEVF 83
                                                        +G  H LAL   GEV+
Sbjct: 4274 PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVY 4333

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
             WG    G+LG    ++ S   PK V+ L  +SV     G +H   +T+SG V    K  
Sbjct: 4334 AWGEGEDGKLG--HGNRVSYDRPKLVEHLHGMSVADIACGSAHSAAITASGQVLTWGKGR 4391

Query: 144  ----GCGSDPSQGVQSNLVQ---------------DSHTTITSLNSPGELYTWGNNEYGQ 184
                G G    Q ++  LV+               D+ T   + +    +++WG+ +YG+
Sbjct: 4392 YGRLGHGDSEDQ-LRPKLVEALLGYRAIDIACGSGDAQTLCITDDD--NVWSWGDGDYGK 4448

Query: 185  MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
            +G   S+     P ++ESL  L +  + CG+  S  L+KS + +Y +G G
Sbjct: 4449 LGRGGSD-GCKLPYKIESLAGLGVIKVECGSQFSVALTKSGA-VYTWGKG 4496



 Score = 61.6 bits (148), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 53/209 (25%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G VF  G  T+G+LGL      +  +P ++  L    VV+  A +S         G  H+
Sbjct: 3126 GRVFACGEGTNGRLGL--GVTYNVPLPHQLPVLHQY-VVKKVAVHS---------GGKHA 3173

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL   G+VF+WG    G+LG    ++ +   P++V+ L +  +     G SH   ++S 
Sbjct: 3174 LALTLDGKVFSWGEGEDGKLG--HGNRTTLDKPRQVEALRAKKIRDVACGSSHSAAISSQ 3231

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            G                                      ELYTWG  EYG++G +  N T
Sbjct: 3232 G--------------------------------------ELYTWGLGEYGRLG-HGDNAT 3252

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLS 222
              KP+ V +L    +  +ACG+  +  L+
Sbjct: 3253 QLKPKLVAALAGRRVVQVACGSRDAQTLA 3281



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 64/147 (43%), Gaps = 19/147 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   GEV+TWG   + +LG    D+  +  P+ + GL    V+    G  HCL
Sbjct: 3327 GAQFSLALTRAGEVWTWGKGDYYRLG-HGGDQHVRK-PQPIGGLRGRRVIHVAVGALHCL 3384

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  S +      P  V GL  V V +   
Sbjct: 3385 AVT------------DSGQVYAWGDNDHGQQG--SGNTFVNKKPALVIGLDDVFVNRVAC 3430

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDP 149
            G SH +     G+   T +E   G  P
Sbjct: 3431 GSSHSIAW---GLPNATMEEEKRGPVP 3454



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 95/229 (41%), Gaps = 60/229 (26%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H +A++     ++WG     +LG    D  ++++P ++  L    V     G ++  V+T
Sbjct: 642 HFMAIDSNHNAYSWGAGEDHRLG--HGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVIT 699

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC--AG 123
                         G + TWG  T+ +LG  ++D +   +P  V  LA  +VV     +G
Sbjct: 700 CG------------GNLLTWGRGTYARLGHGNSDDRC--LPTLVAALAEHTVVDVALGSG 745

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
            +H L LTS G+V                                      + WG+ +YG
Sbjct: 746 DAHSLALTSEGLV--------------------------------------FAWGDGDYG 767

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           ++G  N N ++ +P  VESL    +  I  G+ +S  LS S  ++Y +G
Sbjct: 768 KLGNGNCNGSL-QPILVESLPR--VQRIFAGSQYSVALS-SEGQVYTWG 812



 Score = 43.9 bits (102), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 6/68 (8%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYS 59
            TG  H +A +D GEV+TWG +  GQLG    D    +I  P+ V  L    +V+   G +
Sbjct: 4528 TGSLHCVACSDSGEVYTWGDNDEGQLG----DGTVTAIQRPRLVSALQGKHIVKVTCGSA 4583

Query: 60   HCLVLTST 67
            H L L+++
Sbjct: 4584 HTLALSTS 4591


>gi|380018612|ref|XP_003693221.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Apis
           florea]
          Length = 541

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 105/235 (44%), Gaps = 54/235 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   G+V++WG + H +LG       SQ++ P  +  L +  +V    G SH    
Sbjct: 88  HVLALTKEGKVYSWGQNCHYELGNTFG---SQALTPAIITNLCNEFIVDVACG-SH---- 139

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
                  HSLAL + GEV+ WG +T GQ+G        Q IP+++               
Sbjct: 140 -------HSLALTNDGEVYAWGQNTSGQVGCHDITTLVQDIPRKLN-------------- 178

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                LT   V+  +     CG             DS + + + N  GE+Y+WG N+ GQ
Sbjct: 179 ---FTLTGKKVICIS-----CG-------------DSFSVVVTNN--GEVYSWGRNDVGQ 215

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           +GI N+N     P R+ +L  + I  + CG+ H+  LS     LY +G  +  QL
Sbjct: 216 LGIENNNNDQFHPCRITALTKVVIEKVVCGSIHTLALSDE-GVLYVWGANNYGQL 269



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 85/202 (42%), Gaps = 54/202 (26%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHC 61
           G  HSLAL + GEV+ WG +T GQ+G        Q IP+++   L    V+    G S  
Sbjct: 137 GSHHSLALTNDGEVYAWGQNTSGQVGCHDITTLVQDIPRKLNFTLTGKKVICISCGDSFS 196

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           +V+T+             GEV++WG +  GQLG+E+ +   Q  P R+  L  V + +  
Sbjct: 197 VVVTNN------------GEVYSWGRNDVGQLGIEN-NNNDQFHPCRITALTKVVIEKVV 243

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G  H L L+  GV                                      LY WG N 
Sbjct: 244 CGSIHTLALSDEGV--------------------------------------LYVWGANN 265

Query: 182 YGQMGINNS--NTTVTKPQRVE 201
           YGQ+G+     NT + KP ++E
Sbjct: 266 YGQLGLTTVLLNTNIWKPTKLE 287


>gi|296818339|ref|XP_002849506.1| ubiquitin-protein ligase E3A [Arthroderma otae CBS 113480]
 gi|238839959|gb|EEQ29621.1| ubiquitin-protein ligase E3A [Arthroderma otae CBS 113480]
          Length = 1170

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 116/238 (48%), Gaps = 28/238 (11%)

Query: 857  RKLSFCLQVLQKLNSLNN--ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLAT 914
            R  +  + +L K N L N  +    S S  G   SN+     +   K+A + FY   L  
Sbjct: 679  RAAARVMALLFKANGLRNGRKPEPGSSSKDGPLSSNLND---NRLNKLAISCFYNARL-D 734

Query: 915  VCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLF 974
              D+ +D+  W S     S     C Y F+    AK  ++E D R QME    +  F   
Sbjct: 735  YADLILDFEAWESRIGKFS----FCQYSFLLSIWAKIQIMEHDARRQMEAKAREAFFDTI 790

Query: 975  LQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTN---DFKKPLKVNDTSPIYLAPQVK 1031
            L       ++QYL ++V RD +VED+++ ++    +   D KK L++            +
Sbjct: 791  LGR---RGVSQYLVLKVRRDCLVEDSLQSVSAVIGSGEEDIKKGLRI------------E 835

Query: 1032 FRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            F GEE  DAGG+R+E+ +LL++E+ DP +G+F   E+++  +F+   FE    +FL+G
Sbjct: 836  FAGEEGIDAGGLRKEWFLLLVREVFDPLHGLFLYDEDSQYCYFNPYCFESSEQFFLVG 893



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 17/100 (17%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILD------EPIL 779
           E+++  +F+   FE     FL+G + GLAIYN TI+++  P   ++K+L        P L
Sbjct: 871 EDSQYCYFNPYCFESSEQFFLVGVVLGLAIYNSTILDVALPPFAFRKLLAYSPSNIAPTL 930

Query: 780 ----------LQDLKDLSPTLAKSLQDILDYREPDLEDVF 809
                     L DL +L P LAK L+ +L+Y + D+ + F
Sbjct: 931 SSPPQPFKPNLDDLAELRPALAKGLRQLLEY-DGDVTETF 969


>gi|68465493|ref|XP_723108.1| potential ubiquitin-protein ligase [Candida albicans SC5314]
 gi|68465786|ref|XP_722961.1| potential ubiquitin-protein ligase [Candida albicans SC5314]
 gi|46444969|gb|EAL04240.1| potential ubiquitin-protein ligase [Candida albicans SC5314]
 gi|46445125|gb|EAL04395.1| potential ubiquitin-protein ligase [Candida albicans SC5314]
          Length = 894

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 86/154 (55%), Gaps = 18/154 (11%)

Query: 937  FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTL-NQYLEVEVSRDN 995
            ++C YPF+    AK ++LE + R QME    +     F+ + +   + + Y  + V RD+
Sbjct: 492  YICQYPFLISLGAKISVLEYEARRQMERKAEEA----FINSLDKRVIIDVYFRIRVRRDH 547

Query: 996  IVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEI 1055
            IV+D+++ + +  +++ KK L+V            +F  E   DAGG+++E+ +LL KEI
Sbjct: 548  IVQDSLQYI-KTNSDNLKKSLRV------------QFANEPGVDAGGLKKEWFLLLTKEI 594

Query: 1056 LDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              P+ GMF   +++  +WF+    E+ +MY+L G
Sbjct: 595  FHPQSGMFHNVDDSNFLWFNIIPVENPDMYYLFG 628



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 15/110 (13%)

Query: 712 YPKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYK 771
           +P++G+ H      +++  +WF+    E+ +M +L G + GLAIYN TI+++ FP+ALYK
Sbjct: 596 HPQSGMFH----NVDDSNFLWFNIIPVENPDMYYLFGAILGLAIYNSTILDLQFPIALYK 651

Query: 772 KILDEPILLQDLKDLSPTLAKSL--------QDILDYR---EPDLEDVFG 810
            +L   +   D + L P   K+L        ++ILD     E    D+FG
Sbjct: 652 ILLKRGLDRDDYRKLYPVSYKNLINLKSMSNKEILDLDLTFEVSYSDMFG 701


>gi|255726168|ref|XP_002548010.1| hypothetical protein CTRG_02307 [Candida tropicalis MYA-3404]
 gi|240133934|gb|EER33489.1| hypothetical protein CTRG_02307 [Candida tropicalis MYA-3404]
          Length = 915

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 85/154 (55%), Gaps = 18/154 (11%)

Query: 937  FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHT-LNQYLEVEVSRDN 995
            ++C YPF+    +K ++LE + R QME    +     F+ + +    ++ Y  + V RD+
Sbjct: 513  YICQYPFLISLGSKISVLEYEARRQMERKAEEA----FINSLDKRVVIDVYFRIRVRRDH 568

Query: 996  IVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEI 1055
            IV+D+++ + +   ++ KK L+V            +F  E   DAGG+++E+ +LL KEI
Sbjct: 569  IVQDSLQHI-KMNPDNLKKSLRV------------QFMNEPGVDAGGLKKEWFLLLTKEI 615

Query: 1056 LDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              P+ GMF   E++  +WF+    E+ +MY+L G
Sbjct: 616  FHPQSGMFHNVEDSNLLWFNVIPAENPDMYYLFG 649



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 4/94 (4%)

Query: 712 YPKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYK 771
           +P++G+ H      E++  +WF+    E+ +M +L G + GLAIYN TI+++ FP+ALYK
Sbjct: 617 HPQSGMFH----NVEDSNLLWFNVIPAENPDMYYLFGAILGLAIYNSTILDLQFPIALYK 672

Query: 772 KILDEPILLQDLKDLSPTLAKSLQDILDYREPDL 805
            +L  P+   D K L P   K+L ++      DL
Sbjct: 673 LLLGRPLDQDDYKQLYPVSYKNLLNLKTLSTSDL 706


>gi|196015398|ref|XP_002117556.1| hypothetical protein TRIADDRAFT_32725 [Trichoplax adhaerens]
 gi|190579878|gb|EDV19966.1| hypothetical protein TRIADDRAFT_32725 [Trichoplax adhaerens]
          Length = 601

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 24/191 (12%)

Query: 902  VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDF-LCNYPFIFDAKAKTTLLEMDQRI 960
            V ++AFY   L+   D R DY R+       +  D  L ++P +     KT  L +D R+
Sbjct: 172  VTFSAFYNEALSDAIDPRYDYRRF-------TVNDICLLDFPCVIMPFNKTQYLSLDCRL 224

Query: 961  QMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVND 1020
            +    +      + L   N    N +L + V RD+++ED + +L             V+D
Sbjct: 225  RQNDEIGAA---IILSLLNRDVPNPFLIIRVRRDHLIEDALWQLEH-----------VSD 270

Query: 1021 TSPIYLAPQ--VKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDT 1078
             +P  L  Q  +KF GEE  D GG+ +EF +L+ +EI +P+Y MF+  E+  + WF+ D+
Sbjct: 271  DNPSALLKQLRIKFVGEEGVDDGGLSKEFFVLINQEIFNPEYAMFRYNEKAGTYWFTPDS 330

Query: 1079 FEDQNMYFLIG 1089
            +E    Y L+G
Sbjct: 331  YETDAQYKLVG 341



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 64/100 (64%), Gaps = 2/100 (2%)

Query: 719 HYGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            Y +  Y E+  + WF+ D++E      L+G L GLAIYN  I+++ FP+ALY+K+  + 
Sbjct: 311 EYAMFRYNEKAGTYWFTPDSYETDAQYKLVGILVGLAIYNGIILDVTFPMALYRKLYGQK 370

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
           ++L+DL D  P + +SL ++L+Y E D+E+ F  TF+  Y
Sbjct: 371 LILEDLSDCFPEIWQSLVNLLNY-EGDVENDFMYTFKISY 409


>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
 gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
          Length = 3840

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 106/234 (45%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A++  GE++TWG   +G+LG    D  +Q  PK V  LA   V+Q   G     
Sbjct: 1979 GSSHSAAISSQGELYTWGLGEYGRLG--HGDNATQLKPKLVAALAGRRVIQVACGSRDA- 2035

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL + G VF+WG    G+LG      +    P  ++ L+ + V+Q   
Sbjct: 2036 ---------QTLALTEDGSVFSWGDGDFGKLG--RGGSEGSDTPHEIERLSGIGVIQIEC 2084

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-------PSQGVQSNLVQDSHTTITSLN-- 169
            G    L LT +G V    K +    G G D       P  G++   V   H  + +L+  
Sbjct: 2085 GAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRV--IHVAVGALHCL 2142

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G  N+     KP  V  L  + +  +ACG++HS  
Sbjct: 2143 AVTDAGQVYAWGDNDHGQQGSGNTFVN-KKPALVIGLDAVFVNRVACGSSHSIA 2195



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 29/236 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   G V TWG   +G+LG    D + Q  P+ V+ L     +    G     
Sbjct: 3124 GSAHSAAITASGHVLTWGKGRYGRLG--HGDSEDQLRPQLVEALLGYRAIDIACG----- 3176

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L + D   V++WG   +G+LG   +D     +P +++ LA + V++   
Sbjct: 3177 -----SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD--GCKLPYKIESLAGLGVIKVEC 3229

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGS-----DPS-----QGVQSNLVQDSHTTITSL 168
            G    + LT SG V    K +    G GS      P      QG +   +        + 
Sbjct: 3230 GSQFSVALTKSGAVYTWSKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVAC 3289

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
            +  GE+YTWG+N+ GQ+G + + T + +P+ V +L    I  + CG+ H+  LS S
Sbjct: 3290 SDSGEVYTWGDNDEGQLG-DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 3344



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 120/270 (44%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+LAL   G+VF+WG    G+LG    ++ +   P+ V+ L S  +     G S  
Sbjct: 1926 SGGKHALALTLDGKVFSWGEGEDGKLG--HGNRTTLDKPRLVETLRSKKIRDVACGSS-- 1981

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      HS A++  GE++TWG   +G+LG    D  +Q  PK V  LA   V+Q  
Sbjct: 1982 ----------HSAAISSQGELYTWGLGEYGRLG--HGDNATQLKPKLVAALAGRRVIQVA 2029

Query: 122  AGY--SHCLVLTSSGVVTC--------THKENGCGSDPSQ------GVQSNLVQDSHTTI 165
             G   +  L LT  G V            +    GSD         G+    ++      
Sbjct: 2030 CGSRDAQTLALTEDGSVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFS 2089

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   GE++TWG  +Y ++G +  +  V KPQ +  L    +  +A GA H   ++ + 
Sbjct: 2090 LALTRAGEVWTWGKGDYYRLG-HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDA- 2147

Query: 226  SRLYAFGIGSAVQLDSPKS-VHKTPQLIHG 254
             ++YA+G     Q  S  + V+K P L+ G
Sbjct: 2148 GQVYAWGDNDHGQQGSGNTFVNKKPALVIG 2177



 Score = 61.6 bits (148), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 117/308 (37%), Gaps = 78/308 (25%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+      ++ WG +  GQL GLE +  K+   P   + L+ +  VQ   G      +T
Sbjct: 2970 ALSWGGASTIYGWGHNHRGQLGGLEGSRIKT---PTPCEALSLLRPVQLAGGEQSLFAVT 3026

Query: 66   S------------------------------------------TTGLWHSLALNDCGEVF 83
                                                        +G  H LAL   GEV+
Sbjct: 3027 PDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVY 3086

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
             WG    G+LG    ++ S   PK V+ L  ++V     G +H   +T+SG V    K  
Sbjct: 3087 AWGEGEDGKLG--HGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGR 3144

Query: 144  ----GCGSDPSQGVQSNLVQ---------------DSHTTITSLNSPGELYTWGNNEYGQ 184
                G G    Q ++  LV+               D+ T   + +    +++WG+ +YG+
Sbjct: 3145 YGRLGHGDSEDQ-LRPQLVEALLGYRAIDIACGSGDAQTLCITDDD--NVWSWGDGDYGK 3201

Query: 185  MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS-------RLYAFGIGSAV 237
            +G   S+     P ++ESL  L +  + CG+  S  L+KS +         +  G GS  
Sbjct: 3202 LGRGGSD-GCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHGSVD 3260

Query: 238  QLDSPKSV 245
             +  PK V
Sbjct: 3261 HVRRPKKV 3268



 Score = 60.1 bits (144), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 53/209 (25%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  +P ++  L    VV+  A +S         G  H+
Sbjct: 1884 GKVYACGEGTNGRLGL--GVTHNVPLPHQLPVLHQY-VVKKVAVHS---------GGKHA 1931

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL   G+VF+WG    G+LG    ++ +   P+ V+ L S  +     G SH   ++S 
Sbjct: 1932 LALTLDGKVFSWGEGEDGKLG--HGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQ 1989

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            G                                      ELYTWG  EYG++G +  N T
Sbjct: 1990 G--------------------------------------ELYTWGLGEYGRLG-HGDNAT 2010

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLS 222
              KP+ V +L    +  +ACG+  +  L+
Sbjct: 2011 QLKPKLVAALAGRRVIQVACGSRDAQTLA 2039



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 65/147 (44%), Gaps = 19/147 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   SLAL   GEV+TWG   + +LG    D+  +  P+ + GL    V+    G  HCL
Sbjct: 2085 GAQFSLALTRAGEVWTWGKGDYYRLG-HGGDQHVRK-PQPIGGLRGRRVIHVAVGALHCL 2142

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+V+ WG + HGQ G  S +      P  V GL +V V +   
Sbjct: 2143 AVT------------DAGQVYAWGDNDHGQQG--SGNTFVNKKPALVIGLDAVFVNRVAC 2188

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDP 149
            G SH +     G+   T +E   G  P
Sbjct: 2189 GSSHSIAW---GLPNATLEEEKRGPVP 2212



 Score = 43.9 bits (102), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 6/68 (8%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYS 59
            TG  H +A +D GEV+TWG +  GQLG    D    +I  P+ V  L    +V+   G +
Sbjct: 3281 TGSLHCVACSDSGEVYTWGDNDEGQLG----DGTVTAIQRPRLVAALQGKHIVKVTCGSA 3336

Query: 60   HCLVLTST 67
            H L L+++
Sbjct: 3337 HTLALSTS 3344


>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
          Length = 4643

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 121/269 (44%), Gaps = 35/269 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+LAL   G+VF+WG    G+LG    +  S   P+ ++ L S  +     G  H 
Sbjct: 2884 SGGKHALALTQDGKVFSWGEGEDGKLG--HGNSISLDKPRLIESLKSKRIRDIACGSGHS 2941

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE++TWG   +G+LG    D  +QS PK V+ L    V+Q  
Sbjct: 2942 AAITSS------------GELYTWGLGEYGRLG--HGDTATQSKPKLVQSLVGQRVIQIA 2987

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQDSHTTIT----------- 166
             G   +  + LT+ G+V      +    G   S G  + L+ D    +            
Sbjct: 2988 CGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFS 3047

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   GE++TWG  +Y ++G  N +  V KP  VE L    I  +A GA H   ++  +
Sbjct: 3048 LALTKYGEVWTWGKGDYFRLGHGNDH-HVRKPTLVEGLRGKKIIHVAVGALHCLAVT-DI 3105

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIH 253
             ++YA+G      Q +    V+K P L+H
Sbjct: 3106 GQVYAWGDNDHGQQGNGTTIVNKKPSLVH 3134



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 29/234 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   G ++TWG   +G+LG    D + Q  PK ++ L    V+    G     
Sbjct: 3931 GGHHSAAITSAGWLYTWGKGRYGRLG--HGDSEDQLTPKLIEALQDYKVIDVACG----- 3983

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L + D   V++WG   +G+LG   +D     IP +++ LA + V++   
Sbjct: 3984 -----SGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSD--GCKIPMKIESLAGLGVIKVEC 4036

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSL 168
            G    + LT SG +    K +    G G+D            QG +   +        + 
Sbjct: 4037 GSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVAC 4096

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               GE++TWG+N+ GQ+G + + + + +P+ V +L    I  +ACG+ H+   S
Sbjct: 4097 TDKGEVFTWGDNDEGQLG-DGTTSALQRPRLVHALQGKKITRVACGSAHTLAWS 4149



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 106/234 (45%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +QS PK V+ L    V+Q   G     
Sbjct: 2937 GSGHSAAITSSGELYTWGLGEYGRLG--HGDTATQSKPKLVQSLVGQRVIQIACGSRDA- 2993

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      ++AL   G V++WG    G+LG   +D      P  +  L  + VVQ   
Sbjct: 2994 ---------QTMALTADGLVYSWGDGDFGKLGRGGSD--GCYTPLLIDRLNGLGVVQIEC 3042

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT  G V    K +    G G+D     P+  +G++   +   H  + +L+  
Sbjct: 3043 GAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKI--IHVAVGALHCL 3100

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N +     KP  V  L +  +  ++CG++HS  
Sbjct: 3101 AVTDIGQVYAWGDNDHGQQG-NGTTIVNKKPSLVHELDDARVNRVSCGSSHSIA 3153



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 56/234 (23%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSH 60
            +G  H LAL+  G V++WG    G+LG    ++ S   PK ++ L    +V  AC G+  
Sbjct: 3878 SGGKHCLALSSEGHVYSWGEGDDGKLG--HGNRLSYDRPKLIEELLGTEIVDIACGGH-- 3933

Query: 61   CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                       HS A+   G ++TWG   +G+LG    D + Q  PK ++ L    V+  
Sbjct: 3934 -----------HSAAITSAGWLYTWGKGRYGRLG--HGDSEDQLTPKLIEALQDYKVIDV 3980

Query: 121  CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
                                    CGS  +Q +              +     +++WG+ 
Sbjct: 3981 -----------------------ACGSGDAQTL-------------CVTDDDNVWSWGDG 4004

Query: 181  EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
            +YG++G   S+     P ++ESL  L +  + CG+  S  L++S   +Y +G G
Sbjct: 4005 DYGKLGRGGSDGCKI-PMKIESLAGLGVIKVECGSQFSVALTRS-GAIYTWGKG 4056



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 97/222 (43%), Gaps = 54/222 (24%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+++  G  T+G+LGL   D  +   PK +  L+   V++  A +S         G  H+
Sbjct: 2842 GKLYACGEGTNGRLGL--GDDSNVCEPKPIPFLSQY-VIKKVAVHS---------GGKHA 2889

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL   G+VF+WG    G+LG    +  S   P+ ++ L S  +     G  H   +TSS
Sbjct: 2890 LALTQDGKVFSWGEGEDGKLG--HGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSS 2947

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            G                                      ELYTWG  EYG++G +    T
Sbjct: 2948 G--------------------------------------ELYTWGLGEYGRLG-HGDTAT 2968

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL-YAFGIG 234
             +KP+ V+SLV   +  IACG+  +  ++ +   L Y++G G
Sbjct: 2969 QSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDG 3010



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 101/235 (42%), Gaps = 43/235 (18%)

Query: 8    LALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            L+ +  G ++ WG +  GQLG LE A  K   +P   + L+++  VQ   G      +T+
Sbjct: 3778 LSWDGSGAIYGWGHNHRGQLGGLEGAKVK---LPVLCESLSALRPVQLTGGEQTLFAVTA 3834

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV--VQACAGY 124
                         G+V+  G    G+LG+   D  S  +P  ++ +  V V  V   +G 
Sbjct: 3835 D------------GKVYATGYGAVGRLGIGGTD--SVMVPTLLESIQHVFVKKVAVNSGG 3880

Query: 125  SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTI------------------T 166
             HCL L+S G V       G G D   G  + L  D    I                   
Sbjct: 3881 KHCLALSSEGHVYSW----GEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSA 3936

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
            ++ S G LYTWG   YG++G  +S   +T P+ +E+L +  +  +ACG+  +  L
Sbjct: 3937 AITSAGWLYTWGKGRYGRLGHGDSEDQLT-PKLIEALQDYKVIDVACGSGDAQTL 3990



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 96/237 (40%), Gaps = 37/237 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHC 61
           G  +S AL+  GE++TWG   +G+LG  ++DK    IP  V  L    VV  AC G    
Sbjct: 562 GSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVM-IPTLVTALNGHMVVYVACGGGRDP 620

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      +L +   G VF+WG   HG+LG    D      PK V  L  ++V +  
Sbjct: 621 ----------QTLCVTASGIVFSWGDGNHGKLGRGGCD--GSKTPKIVDKLLDINVAKVY 668

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQG---------------VQSNLVQD---SHT 163
            G      LT+ G V       G G D   G               +++  ++D    H 
Sbjct: 669 CGQQFSAALTAYGEVYTW----GKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHL 724

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
            + +L     +Y WG N++GQ+      T V +P    +     +  +ACG   SF 
Sbjct: 725 HVLALTEDQLVYGWGRNDHGQID-PALGTIVPEPTLCPTFSGKNVIGLACGPTQSFA 780



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 106/252 (42%), Gaps = 34/252 (13%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL     V++WG    G+LG    +      PK ++ L   ++     G +      
Sbjct: 513 HYLALTQDNSVYSWGNGECGRLG--HGNMTWYDEPKLIEALVEKNITFIACGST------ 564

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGY 124
                 +S AL+  GE++TWG   +G+LG  ++DK    IP  V  L    VV  AC G 
Sbjct: 565 ------YSAALSSNGELYTWGRGNYGKLGHGNSDKDVM-IPTLVTALNGHMVVYVACGGG 617

Query: 125 S--HCLVLTSSGVVTCTHKEN-------GCGSDPSQGVQSNLVQDSHTTI-------TSL 168
                L +T+SG+V      N       GC    +  +   L+  +   +        +L
Sbjct: 618 RDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAAL 677

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
            + GE+YTWG  E  ++G  N +  V  P+ ++ L    I  +  G  H   L++    +
Sbjct: 678 TAYGEVYTWGKGEDYKLGHGNED-HVRYPKIIDILKTKKIKDLYIGHLHVLALTED-QLV 735

Query: 229 YAFGIGSAVQLD 240
           Y +G     Q+D
Sbjct: 736 YGWGRNDHGQID 747



 Score = 49.3 bits (116), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 11/134 (8%)

Query: 112 LASVSVVQACAGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQDSHTTI 165
           ++ + + Q C      ++L+ +G V      + T +  G    P   + S+     +  +
Sbjct: 458 ISELGIKQLCCTERAVIILSVNGNVYMMYYGSETQRVYGFSEKPITMIASHSDGTHYLAL 517

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
           T  NS   +Y+WGN E G++G  N  T   +P+ +E+LV   I  IACG+ +S  LS S 
Sbjct: 518 TQDNS---VYSWGNGECGRLGHGNM-TWYDEPKLIEALVEKNITFIACGSTYSAALS-SN 572

Query: 226 SRLYAFGIGSAVQL 239
             LY +G G+  +L
Sbjct: 573 GELYTWGRGNYGKL 586



 Score = 42.0 bits (97), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            TG  H +A  D GEVFTWG +  GQLG       +   P+ V  L    + +   G +H 
Sbjct: 4088 TGSLHCVACTDKGEVFTWGDNDEGQLG--DGTTSALQRPRLVHALQGKKITRVACGSAHT 4145

Query: 62   LVLTS 66
            L  ++
Sbjct: 4146 LAWST 4150


>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
          Length = 786

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 29/236 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS A+   G ++TWG   +G+LG    D   Q  PK V+ L    V+    G     
Sbjct: 74  GGHHSAAITSAGWLYTWGKGRYGRLG--HGDSDDQLRPKVVEALQDYKVIDVACG----- 126

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +L + D   V++WG   +G+LG   +D     +P ++  LA + VV+   
Sbjct: 127 -----SGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSD--GCKVPLKIDSLAGLGVVKVEC 179

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSL 168
           G    + LT SG V    K +    G G+D            QG +   +        + 
Sbjct: 180 GSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVAC 239

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
           +  GE++TWG+N+ GQ+G + + + + +P+ V +L    I  +ACG+ H+   S +
Sbjct: 240 SDKGEVFTWGDNDEGQLG-DGTTSALHRPRLVHALQGKKITRVACGSAHTLAWSTA 294



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 120/270 (44%), Gaps = 37/270 (13%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSH 60
           +G  H +AL+  G V++WG    G+LG    +K S   PK ++ L  V +V  AC G+  
Sbjct: 21  SGGKHCIALSSEGHVYSWGEGDDGKLG--HGNKVSYDRPKLIEDLLGVEIVDIACGGH-- 76

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ- 119
                      HS A+   G ++TWG   +G+LG    D   Q  PK V+ L    V+  
Sbjct: 77  -----------HSAAITSAGWLYTWGKGRYGRLG--HGDSDDQLRPKVVEALQDYKVIDV 123

Query: 120 AC-AGYSHCLVLT-SSGVVTCTHKENG-CGSDPSQGVQSNLVQDSHTTI----------- 165
           AC +G +  L +T    V +    + G  G   S G +  L  DS   +           
Sbjct: 124 ACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQF 183

Query: 166 -TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
             +L   G +YTWG  +Y ++G + ++  V +P++V +L    I  IA G+ H    S  
Sbjct: 184 SVALTRSGAVYTWGKGDYHRLG-HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDK 242

Query: 225 VSRLYAFGIGSAVQL-DSPKSVHKTPQLIH 253
              ++ +G     QL D   S    P+L+H
Sbjct: 243 -GEVFTWGDNDEGQLGDGTTSALHRPRLVH 271



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 20/184 (10%)

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
           ++G  H +AL+  G V++WG    G+LG    +K S   PK ++ L  V +V    G  H
Sbjct: 20  SSGGKHCIALSSEGHVYSWGEGDDGKLG--HGNKVSYDRPKLIEDLLGVEIVDIACGGHH 77

Query: 127 CLVLTSSGVVTCTHKEN----GCGSDPSQ-------GVQSNLVQD-----SHTTITSLNS 170
              +TS+G +    K      G G    Q        +Q   V D            +  
Sbjct: 78  SAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTD 137

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
              +++WG+ +YG++G   S+     P +++SL  L +  + CG+  S  L++S + +Y 
Sbjct: 138 DDNVWSWGDGDYGKLGRGGSDGCKV-PLKIDSLAGLGVVKVECGSQFSVALTRSGA-VYT 195

Query: 231 FGIG 234
           +G G
Sbjct: 196 WGKG 199



 Score = 41.6 bits (96), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           TG  H +A +D GEVFTWG +  GQLG       +   P+ V  L    + +   G +H 
Sbjct: 231 TGSLHCVACSDKGEVFTWGDNDEGQLG--DGTTSALHRPRLVHALQGKKITRVACGSAHT 288

Query: 62  LVLTST 67
           L  ++ 
Sbjct: 289 LAWSTA 294


>gi|159039901|ref|YP_001539154.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918736|gb|ABW00164.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 556

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 123/284 (43%), Gaps = 36/284 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL   G V  WG +  GQLG  + D  ++S P  V   A  ++    AG     
Sbjct: 97  GGLHSLALTSTGAVLAWGRNFSGQLG--NGDTTNRSTPVDVDLPAGTTITAIAAGA---- 150

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HSLAL   G V  WG + HGQLG  +    + S P  V   A V++    A
Sbjct: 151 --------FHSLALTSAGTVLAWGENLHGQLG--NGGTTNMSTPVGVSLPAGVTITAVAA 200

Query: 123 GYSHCLVLTSSGVVTC----THKENGCGSDPSQGVQSNLVQDSHTTIT------------ 166
           G  H L +TS+G V      ++ + G G+        ++   + TTIT            
Sbjct: 201 GAFHSLAVTSTGAVLAWGDNSNGQLGNGTTTGSSTPVDVDLPAGTTITAVAAGVAGAAHS 260

Query: 167 -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +L S G    WGNN  GQ+G N   T  + P  V+    + I  +A G  HS  L+ + 
Sbjct: 261 LALTSTGAALAWGNNADGQLG-NGDTTNRSTPVDVDLPAGVTITAVAAGGLHSLALTAA- 318

Query: 226 SRLYAFGIGSAVQLDSPKSV-HKTPQLIHGPWIASPVAMTAGED 268
             + A+G   + QL +  +    TP  +  P  A+  A+ AG D
Sbjct: 319 GAVVAWGRNVSGQLGNGTTTGSSTPVDVDLPTGATINAIAAGFD 362



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 101/276 (36%), Gaps = 62/276 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL   G V  WG + HGQLG  +    + S P  V   A V++    AG  H L
Sbjct: 149 GAFHSLALTSAGTVLAWGENLHGQLG--NGGTTNMSTPVGVSLPAGVTITAVAAGAFHSL 206

Query: 63  VLTSTTGL--W-----------------------------------------HSLALNDC 79
            +TST  +  W                                         HSLAL   
Sbjct: 207 AVTSTGAVLAWGDNSNGQLGNGTTTGSSTPVDVDLPAGTTITAVAAGVAGAAHSLALTST 266

Query: 80  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV--- 136
           G    WG +  GQLG  + D  ++S P  V   A V++    AG  H L LT++G V   
Sbjct: 267 GAALAWGNNADGQLG--NGDTTNRSTPVDVDLPAGVTITAVAAGGLHSLALTAAGAVVAW 324

Query: 137 -----------TCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                      T T        D   G   N +        +L + G +  WG N  GQ+
Sbjct: 325 GRNVSGQLGNGTTTGSSTPVDVDLPTGATINAIAAGFDFGLALTTAGAVVAWGRNVSGQL 384

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
           G N      + P  V+    + I  +A G  HS  L
Sbjct: 385 G-NGDTINRSTPVDVDLPAGVTITAVAAGGQHSMAL 419



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 86/209 (41%), Gaps = 31/209 (14%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           S A+      F WG ++ GQLG  +      S P  V   A  ++    AG  H L LTS
Sbjct: 49  SAAIRASDTYFAWGDNSDGQLG--NGTTTGSSTPVDVYLPAGTTITAVTAGGLHSLALTS 106

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
           T            G V  WG +  GQLG  + D  ++S P  V   A  ++    AG  H
Sbjct: 107 T------------GAVLAWGRNFSGQLG--NGDTTNRSTPVDVDLPAGTTITAIAAGAFH 152

Query: 127 CLVLTSSGVVTC----THKENGCGSDPSQGVQSNLVQDSHTTIT----------SLNSPG 172
            L LTS+G V       H + G G   +      +   +  TIT          ++ S G
Sbjct: 153 SLALTSAGTVLAWGENLHGQLGNGGTTNMSTPVGVSLPAGVTITAVAAGAFHSLAVTSTG 212

Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVE 201
            +  WG+N  GQ+G N + T  + P  V+
Sbjct: 213 AVLAWGDNSNGQLG-NGTTTGSSTPVDVD 240


>gi|240279892|gb|EER43397.1| ubiquitin-protein ligase E3 [Ajellomyces capsulatus H143]
 gi|325093021|gb|EGC46331.1| ubiquitin-protein ligase E3 [Ajellomyces capsulatus H88]
          Length = 1207

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 110/234 (47%), Gaps = 33/234 (14%)

Query: 863  LQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGG----RKVAYTAFYMPDLATVCDI 918
            + +L   NS+ +         GG  +S       H G    R +  +AFY   L    D+
Sbjct: 723  MALLFSANSVTHNRRRDGPRPGGEEISR------HDGQGRRRLIPISAFYN-TLLDYSDL 775

Query: 919  RIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTF 978
              D+  W  GR NG      C Y F     AK  +LE D R QME    +     F    
Sbjct: 776  IADFEAW-EGR-NGQFS--FCQYSFFLSIWAKIRILEHDARRQMEEKAREA---FFDSIL 828

Query: 979  NPHTLNQYLEVEVSRDNIVEDTIRELAQYT---TNDFKKPLKVNDTSPIYLAPQVKFRGE 1035
                ++QYL ++V R+ + ED++R +++       + KK L++            +F GE
Sbjct: 829  GRRGVSQYLVLKVRRECLAEDSLRSVSEVVGTGQGEIKKGLRI------------EFLGE 876

Query: 1036 EAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            E  DAGG+R+E+ +LL++EI DP +G+F   E+++  +F+   FE    +FL+G
Sbjct: 877  EGVDAGGLRKEWFLLLVREIFDPLHGLFVYDEQSQFCYFNPYCFESSEQFFLVG 930



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 21/124 (16%)

Query: 726  EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL------DEPIL 779
            E+++  +F+   FE     FL+G L GLAIYN TI+++  P   ++K+L      + P L
Sbjct: 908  EQSQFCYFNPYCFESSEQFFLVGVLLGLAIYNSTILDIALPPFAFRKLLACAPPNNVPAL 967

Query: 780  ----------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFERLI 829
                      L DL +  P LAK L+D+L+Y E D+++ F + F    ++  + Y ERL+
Sbjct: 968  STPQQSFKCTLDDLAEYQPALAKGLRDLLNY-EGDVQETFCLDF----VVQIERYGERLV 1022

Query: 830  LIFK 833
            +  +
Sbjct: 1023 IPLR 1026


>gi|115774794|ref|XP_780810.2| PREDICTED: ubiquitin-protein ligase E3A-like, partial
            [Strongylocentrotus purpuratus]
          Length = 881

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 25/207 (12%)

Query: 885  GRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFI 944
            G TV + R P       + ++ FY   L    ++  D+  +   +     R    NYPFI
Sbjct: 439  GLTVLDCRKPL------IPFSEFYNEPLNDQLEVDHDFTCY---KKESDGRFAFLNYPFI 489

Query: 945  FDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIREL 1004
                 K+T L  D R++M H    T     +Q      +N YL+++V RD++V+D++  L
Sbjct: 490  LTPATKSTGLYYDSRVRMFHERRLTLLNSLVQG---EEINPYLKLKVRRDHVVDDSLVRL 546

Query: 1005 AQYTTNDFKKPLKVNDTSPIYLAPQ--VKFRGEEAEDAGGVRREFLMLLLKEILDPKYGM 1062
                 ++           P+ L  Q  V+F GE+  D GGV +EF  L+++EI +P  GM
Sbjct: 547  EMIAVDN-----------PMDLKKQLYVEFEGEQGVDEGGVSKEFFQLVIQEIFNPDIGM 595

Query: 1063 FKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            F    + ++ WF+  +FE    Y LIG
Sbjct: 596  FTHNSDLQTYWFNPTSFETNRQYTLIG 622



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 1/96 (1%)

Query: 723 TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQD 782
           T   + ++ WF+  +FE      LIG L GLAIYN  I+++ FP+ +Y+K++    +  D
Sbjct: 597 THNSDLQTYWFNPTSFETNRQYTLIGILLGLAIYNNVILDVTFPMVVYRKLMGRRGVFAD 656

Query: 783 LKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYL 818
           L D  P L  SL+ +L++ E  +E+ F + F   Y+
Sbjct: 657 LHDAQPVLYNSLKALLEH-EDTVEETFMMNFMISYI 691


>gi|160774403|gb|AAI55388.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Xenopus (Silurana) tropicalis]
          Length = 530

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 115/256 (44%), Gaps = 32/256 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L  N+ GEV++WG + + QLG  +A             +  V+ VQ C       V+ 
Sbjct: 86  HILVCNEDGEVYSWGHNGYSQLGNGNA-------------IQGVAPVQVCMELLAKKVVQ 132

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGY 124
              G  HS+AL   GEVF WG +  GQ+G  S    +QS+P+RV   L S  VV   AG 
Sbjct: 133 VACGSHHSMALTSDGEVFCWGYNNCGQVG--SGTTANQSVPRRVSATLQSKVVVSIAAGQ 190

Query: 125 SHCLVLTSSGVVTC----THKENGCGSDPSQGVQSNLVQDSHTTIT----------SLNS 170
           S  + +T +G V C       + G G+  +Q +   LV      I           +L+ 
Sbjct: 191 SSSMAVTDNGHVYCWGYNGTGQLGIGNTGNQLMPCRLVFAHPVCIIQVVLGYAHTLALSD 250

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
            G LY WG N +GQ+GI N +   T P +V +   + + + AC + +         ++Y 
Sbjct: 251 QGVLYAWGANSHGQLGIGNKSNQ-TAPVKVGTNERM-VEVTACHSTNISAAKSQSGQVYM 308

Query: 231 FGIGSAVQLDSPKSVH 246
           +G+     L SP   H
Sbjct: 309 WGLCRGQSLLSPHLTH 324



 Score = 48.9 bits (115), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 55/103 (53%), Gaps = 3/103 (2%)

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
           N  GE+Y+WG+N Y Q+G  N+   V   Q    L+   +  +ACG++HS  L+ S   +
Sbjct: 91  NEDGEVYSWGHNGYSQLGNGNAIQGVAPVQVCMELLAKKVVQVACGSHHSMALT-SDGEV 149

Query: 229 YAFGIGSAVQLDSPKSVHKT-PQLIHGPWIAS-PVAMTAGEDS 269
           + +G  +  Q+ S  + +++ P+ +     +   V++ AG+ S
Sbjct: 150 FCWGYNNCGQVGSGTTANQSVPRRVSATLQSKVVVSIAAGQSS 192



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 14/84 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LAL+D G ++ WG ++HGQLG+   +K +Q+ P +V     +  V AC       
Sbjct: 241 GYAHTLALSDQGVLYAWGANSHGQLGI--GNKSNQTAPVKVGTNERMVEVTAC------- 291

Query: 63  VLTSTTGLWHSLALNDCGEVFTWG 86
               +T +  S A +  G+V+ WG
Sbjct: 292 ---HSTNI--SAAKSQSGQVYMWG 310


>gi|295673126|ref|XP_002797109.1| E3 ubiquitin-protein ligase HUWE1 [Paracoccidioides sp. 'lutzii'
            Pb01]
 gi|226282481|gb|EEH38047.1| E3 ubiquitin-protein ligase HUWE1 [Paracoccidioides sp. 'lutzii'
            Pb01]
          Length = 1347

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 24/252 (9%)

Query: 843  PGVVDSTNGDITFNR--KLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGR 900
            P    +T   IT+++  ++    +V+  L   NN T +            +  P     R
Sbjct: 838  PKSPAATQQAITYSKDWQIRAAAKVMALLFCANNMTHSRKRDGARTGAEEVLRPDGQSSR 897

Query: 901  KVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRI 960
             +   + +   L    D+  D+  W S   NG      C Y F     AK  +LE D R 
Sbjct: 898  HLIPISTFYNTLLDYSDLIADFDAWESR--NGQFS--FCQYSFFLSIWAKIRILEHDARR 953

Query: 961  QMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYT---TNDFKKPLK 1017
            QME    +  F   L       ++QYL ++V R+ + ED++R +++       + KK L+
Sbjct: 954  QMEEKAREAFFNSILGR---RGVSQYLVLKVRRECLAEDSLRSVSEVVGTGQEEIKKGLR 1010

Query: 1018 VNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSED 1077
            +            +F GEE  DAGG+R+E+ +LL++EI DP +G+F   E+++  +F+  
Sbjct: 1011 I------------EFLGEEGVDAGGLRKEWFLLLVREIFDPLHGLFVYDEQSQYCYFNPF 1058

Query: 1078 TFEDQNMYFLIG 1089
             FE    +FL+G
Sbjct: 1059 CFESSEQFFLVG 1070



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 68/124 (54%), Gaps = 21/124 (16%)

Query: 726  EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL------DEPIL 779
            E+++  +F+   FE     FL+G L GLAIYN TI+++  P   ++K+L      + P L
Sbjct: 1048 EQSQYCYFNPFCFESSEQFFLVGVLLGLAIYNSTILDIALPPFAFRKLLSCAPSNNVPAL 1107

Query: 780  ----------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFERLI 829
                      LQDL +  P LA+ L+++L+Y + D+++ F + F    ++  D Y ++L+
Sbjct: 1108 STPQQVFKCTLQDLAEYQPALARGLRNLLEY-DGDVQEAFCLDF----VIQVDRYGKKLV 1162

Query: 830  LIFK 833
            L  +
Sbjct: 1163 LPLR 1166


>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1679

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 109/237 (45%), Gaps = 42/237 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+   G+++TWG   HG+LG    D   Q +P  V+ + + S  Q  AG SH 
Sbjct: 482 AGSRHSAAITKDGDLYTWGEGEHGRLG--HGDSSIQRVPTLVRSIDAAS--QVAAGCSHT 537

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           +VL+            D   V+T+G   +G+LG    + K +  PK V  L  + + +  
Sbjct: 538 VVLSK-----------DEMTVWTFGAGDNGKLG--HGNTKMEYYPKIVDALKGIRIKKIA 584

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQS-----------NLVQDSHTTITSL-- 168
           AG    + LT +G +       GCG  P  GV +             ++D H    SL  
Sbjct: 585 AGTQCSIALTWTGFIYVW----GCG--PCLGVGAADAVHLLPKIVESLRDVHIVDISLGD 638

Query: 169 ------NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                 ++  E+Y+WGNN  GQ G+ +  T V+ P +V +L  + I  I+ G +HSF
Sbjct: 639 CHCLALSADHEVYSWGNNNMGQCGLGHCFTPVSLPTKVLALDGIKIEQISTGTSHSF 695



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 35/242 (14%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LAL   G V++WG    G+LG    +  +Q +PK ++G+           + + ++  
Sbjct: 433 HTLALTKNGVVYSWGDGEFGKLG--HGNVATQKLPKVIRGV-----------FKNQIITF 479

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G  HS A+   G+++TWG   HG+LG    D   Q +P  V+ + + S  Q  AG S
Sbjct: 480 ISAGSRHSAAITKDGDLYTWGEGEHGRLG--HGDSSIQRVPTLVRSIDAAS--QVAAGCS 535

Query: 126 HCLVLTSSGVVTCTHKENGCGS---------------DPSQGVQSNLVQDSHTTITSLNS 170
           H +VL+   +   T      G                D  +G++   +        +L  
Sbjct: 536 HTVVLSKDEMTVWTFGAGDNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIALTW 595

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
            G +Y WG      +G+  ++     P+ VESL ++ I  I+ G  H   LS     +Y+
Sbjct: 596 TGFIYVWGCGPC--LGVGAADAVHLLPKIVESLRDVHIVDISLGDCHCLALSAD-HEVYS 652

Query: 231 FG 232
           +G
Sbjct: 653 WG 654



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 116/292 (39%), Gaps = 78/292 (26%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G + + AL D G +   G  +HG+LGL  +  K Q + K      ++  + +  G    
Sbjct: 375 AGQYCTFALFDDGSLHACGKGSHGKLGLGDSSSK-QCLHKLNLFNQNIDQISSSKGSDS- 432

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-A 120
                     H+LAL   G V++WG    G+LG    +  +Q +PK ++G+    ++   
Sbjct: 433 ----------HTLALTKNGVVYSWGDGEFGKLG--HGNVATQKLPKVIRGVFKNQIITFI 480

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            AG  H   +T                                        G+LYTWG  
Sbjct: 481 SAGSRHSAAITKD--------------------------------------GDLYTWGEG 502

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIAL--IACGANHSFVLSKSVSRLYAFGIGSAVQ 238
           E+G++G  +S+      QRV +LV    A   +A G +H+ VLSK    ++ FG G    
Sbjct: 503 EHGRLGHGDSSI-----QRVPTLVRSIDAASQVAAGCSHTVVLSKDEMTVWTFGAG---- 553

Query: 239 LDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSI 290
            D+ K  H   ++ + P I   +              G+ +KKI +G   SI
Sbjct: 554 -DNGKLGHGNTKMEYYPKIVDALK-------------GIRIKKIAAGTQCSI 591



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 16/131 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G   S+AL   G ++ WG      LG+ +AD     +PK V+ L  V +V    G  HC
Sbjct: 585 AGTQCSIALTWTGFIYVWGCGP--CLGVGAADA-VHLLPKIVESLRDVHIVDISLGDCHC 641

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           L L++              EV++WG +  GQ GL        S+P +V  L  + + Q  
Sbjct: 642 LALSAD------------HEVYSWGNNNMGQCGLGHCFTPV-SLPTKVLALDGIKIEQIS 688

Query: 122 AGYSHCLVLTS 132
            G SH    T+
Sbjct: 689 TGTSHSFAWTT 699


>gi|294658534|ref|XP_460872.2| DEHA2F11704p [Debaryomyces hansenii CBS767]
 gi|202953203|emb|CAG89222.2| DEHA2F11704p [Debaryomyces hansenii CBS767]
          Length = 915

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 94/186 (50%), Gaps = 30/186 (16%)

Query: 910  PDLATVCDIRIDYFRWISGRPNG-----STRDFLCNYPFIFDAKAKTTLLEMDQRIQMEH 964
            P+L TV D       +I G  N      S+  F C YPF+    +K ++LE + R QME 
Sbjct: 488  PELQTVID-------YIHGHNNSFKFNESSSYFFCQYPFLISLGSKISILEYEARRQMER 540

Query: 965  AMNQTNFYLFLQTFNPH-TLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSP 1023
               +     F+ + +    ++ Y +V V R+ IV+D++R +    TN  KK L+V     
Sbjct: 541  KAEEA----FINSLDKRIAIDVYFKVRVRREYIVQDSLRCIKMNPTN-LKKSLRV----- 590

Query: 1024 IYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQN 1083
                   +F  E   DAGG+++E+ +LL +E+  P+ G+F   E++  +WF+    E+  
Sbjct: 591  -------QFIDEPGVDAGGIKKEWFLLLTRELFSPQAGIFVNIEDSNLLWFNVVPIENYE 643

Query: 1084 MYFLIG 1089
            MY+L G
Sbjct: 644  MYYLFG 649



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 4/93 (4%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           P+ GI        E++  +WF+    E+  M +L G + GLAIYN TI+N+ FP ALYK 
Sbjct: 618 PQAGI----FVNIEDSNLLWFNVVPIENYEMYYLFGAILGLAIYNSTILNLKFPTALYKL 673

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDL 805
           +L +P+ L D + L P  A +L  + +Y   +L
Sbjct: 674 LLGKPVDLSDYQKLYPVSASNLLKLREYSNEEL 706


>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
          Length = 958

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    V+    G    
Sbjct: 369 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVIDIACG---- 422

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                 +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 423 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 474

Query: 122 AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
            G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 475 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 534

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
               GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 535 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 590



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7   SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 216 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 272

Query: 66  STTGLW------------------------------------------HSLALNDCGEVF 83
           +   L+                                          H LAL+  GEV+
Sbjct: 273 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 332

Query: 84  TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
           +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 333 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 390

Query: 143 NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
            G    SD    ++  LV+    H  I      G+           +++WG+ +YG++G 
Sbjct: 391 YGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 450

Query: 188 NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
             S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 451 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 508

Query: 247 KTPQLIHGPWIASPVAMTAG 266
           + P+ + G      +A+  G
Sbjct: 509 RRPRQVQGLQGKKVIAIATG 528


>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
 gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
          Length = 2660

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 106/234 (45%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A++  GE++TWG   +G+LG    D  +Q  PK V  LA   VVQ   G     
Sbjct: 879  GSSHSAAISSQGELYTWGLGEYGRLG--HGDNATQLKPKLVTALAGRRVVQVACGSRDA- 935

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL + G VF+WG    G+LG      +    P  ++ L+ + VVQ   
Sbjct: 936  ---------QTLALTEDGAVFSWGDGDFGKLG--RGGSEGSDTPHEIERLSGIGVVQIEC 984

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-------PSQGVQSNLVQDSHTTITSLN-- 169
            G    L LT +G V    K +    G G D       P  G++   V   H  + +L+  
Sbjct: 985  GAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRV--IHVAVGALHCL 1042

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G  N+     KP  V  L  + +  +ACG++HS  
Sbjct: 1043 AVTDAGQVYAWGDNDHGQQGSGNTFVN-KKPALVIGLDAVFVNRVACGSSHSIA 1095



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 110/236 (46%), Gaps = 29/236 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   G V TWG   +G+LG    D + Q  PK         +V+A  GY   +
Sbjct: 1944 GSAHSAAITASGHVLTWGKGRYGRLG--HGDSEDQLRPK---------LVEALLGY-RAI 1991

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +   +G   +L + D   V++WG   +G+LG   +D     +P +++ LA + VV+   
Sbjct: 1992 DIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD--GCKLPYKIESLAGLGVVKVEC 2049

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGS-----DPS-----QGVQSNLVQDSHTTITSL 168
            G    + LT SG V    K +    G GS      P      QG +   +        + 
Sbjct: 2050 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVAC 2109

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
            +  GE+YTWG+N+ GQ+G + + T + +P+ V +L    I  + CG+ H+  LS S
Sbjct: 2110 SDSGEVYTWGDNDEGQLG-DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 2164



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 120/270 (44%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+LAL   G+VF+WG    G+LG    ++ +   P+ V+ L +  +     G S  
Sbjct: 826  SGGKHALALTLDGKVFSWGEGEDGKLG--HGNRTTLDKPRLVEALRAKKIRDVACGSS-- 881

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      HS A++  GE++TWG   +G+LG    D  +Q  PK V  LA   VVQ  
Sbjct: 882  ----------HSAAISSQGELYTWGLGEYGRLG--HGDNATQLKPKLVTALAGRRVVQVA 929

Query: 122  AGY--SHCLVLTSSGVVTC--------THKENGCGSDPSQ------GVQSNLVQDSHTTI 165
             G   +  L LT  G V            +    GSD         G+    ++      
Sbjct: 930  CGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFS 989

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   GE++TWG  +Y ++G +  +  V KPQ +  L    +  +A GA H   ++ + 
Sbjct: 990  LALTRAGEVWTWGKGDYYRLG-HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDA- 1047

Query: 226  SRLYAFGIGSAVQLDSPKS-VHKTPQLIHG 254
             ++YA+G     Q  S  + V+K P L+ G
Sbjct: 1048 GQVYAWGDNDHGQQGSGNTFVNKKPALVIG 1077



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 114/290 (39%), Gaps = 72/290 (24%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+      ++ WG +  GQL GLE +  K+   P   + L+ +  VQ   G      +T
Sbjct: 1790 ALSWGGASTIYGWGHNHRGQLGGLEGSRIKT---PTPCEALSLLRPVQLAGGEQSLFAVT 1846

Query: 66   S------------------------------------------TTGLWHSLALNDCGEVF 83
                                                        +G  H LAL   GEV+
Sbjct: 1847 PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVY 1906

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
             WG    G+LG    ++ S   PK V+ L  +SV     G +H   +T+SG V    K  
Sbjct: 1907 AWGEGEDGKLG--HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGR 1964

Query: 144  ----GCGSDPSQGVQSNLVQ---------------DSHTTITSLNSPGELYTWGNNEYGQ 184
                G G    Q ++  LV+               D+ T   + +    +++WG+ +YG+
Sbjct: 1965 YGRLGHGDSEDQ-LRPKLVEALLGYRAIDIACGSGDAQTLCITDDD--NVWSWGDGDYGK 2021

Query: 185  MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
            +G   S+     P ++ESL  L +  + CG+  S  L+KS + +Y +G G
Sbjct: 2022 LGRGGSD-GCKLPYKIESLAGLGVVKVECGSQFSVALTKSGA-VYTWGKG 2069



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 88/209 (42%), Gaps = 53/209 (25%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
           G+V+  G  T+G+LGL      +  +P ++  L    VV+  A +S         G  H+
Sbjct: 784 GKVYACGEGTNGRLGL--GVTHNVPLPHQLPVLHQY-VVKKVAVHS---------GGKHA 831

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
           LAL   G+VF+WG    G+LG    ++ +   P+ V+ L +  +     G SH   ++S 
Sbjct: 832 LALTLDGKVFSWGEGEDGKLG--HGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQ 889

Query: 134 GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
           G                                      ELYTWG  EYG++G +  N T
Sbjct: 890 G--------------------------------------ELYTWGLGEYGRLG-HGDNAT 910

Query: 194 VTKPQRVESLVNLPIALIACGANHSFVLS 222
             KP+ V +L    +  +ACG+  +  L+
Sbjct: 911 QLKPKLVTALAGRRVVQVACGSRDAQTLA 939



 Score = 43.1 bits (100), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 6/68 (8%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYS 59
            TG  H +A +D GEV+TWG +  GQLG    D    +I  P+ V  L    +V+   G +
Sbjct: 2101 TGSLHCVACSDSGEVYTWGDNDEGQLG----DGTVTAIQRPRLVAALQGKHIVKVTCGSA 2156

Query: 60   HCLVLTST 67
            H L L+++
Sbjct: 2157 HTLALSTS 2164


>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
          Length = 5118

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 29/234 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   G ++TWG   +G+LG    D + Q  PK V+ L    V+    G     
Sbjct: 4406 GGHHSAAITSAGWLYTWGKGRYGRLG--HGDSEDQLTPKLVEALQDYKVIDVACG----- 4458

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L + D   V++WG   +G+LG   +D     IP +++ LA + V++   
Sbjct: 4459 -----SGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSD--GCKIPMKIESLAGLGVIKVEC 4511

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSL 168
            G    + LT SG +    K +    G G+D            QG +   +        + 
Sbjct: 4512 GSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVAC 4571

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               GE++TWG+N+ GQ+G + + + + +P+ V +L    I  +ACG+ H+   S
Sbjct: 4572 TDKGEVFTWGDNDEGQLG-DGTTSALQRPRLVHALQGKKITRVACGSAHTLAWS 4624



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 119/269 (44%), Gaps = 35/269 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+LAL   G++F+WG    G+LG    +  S   P+ ++ L S  +     G  H 
Sbjct: 3348 SGGKHALALTQDGKIFSWGEGEDGKLG--HGNSVSLDKPRLIESLKSKRIRDIACGSGHS 3405

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE++TWG   +G+LG    D  +Q  PK V+ L    V+Q  
Sbjct: 3406 AAITSS------------GELYTWGLGEYGRLG--HGDTATQMKPKLVQSLVGQRVIQVA 3451

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQDSHTTIT----------- 166
             G   +  + LT+ G V      +    G   S G  + L+ D    +            
Sbjct: 3452 CGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFS 3511

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   GE++TWG  +Y ++G  N +  V KP  VE L    +  +A GA H   ++ + 
Sbjct: 3512 LALTKYGEVWTWGKGDYFRLGHGNDH-HVRKPTLVEGLRGKKVVHVAVGALHCLAVTDT- 3569

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIH 253
             ++YA+G      Q +    V+K P L+H
Sbjct: 3570 GQVYAWGDNDHGQQGNGSTIVNKKPSLVH 3598



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 105/234 (44%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +Q  PK V+ L    V+Q   G     
Sbjct: 3401 GSGHSAAITSSGELYTWGLGEYGRLG--HGDTATQMKPKLVQSLVGQRVIQVACGSRDA- 3457

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      ++AL   G V++WG    G+LG   +D      P  +  L  + VVQ   
Sbjct: 3458 ---------QTMALTADGSVYSWGDGDFGKLGRGGSD--GCYTPLLIDRLNGLGVVQIEC 3506

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT  G V    K +    G G+D     P+  +G++   V   H  + +L+  
Sbjct: 3507 GAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKV--VHVAVGALHCL 3564

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N S     KP  V  L +  +  ++CG++HS  
Sbjct: 3565 AVTDTGQVYAWGDNDHGQQG-NGSTIVNKKPSLVHELDDARVNRVSCGSSHSIA 3617



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 56/234 (23%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSH 60
            +G  H LAL+  G V++WG    G+LG    ++     PK ++ L    +V  AC G+  
Sbjct: 4353 SGGKHCLALSSEGHVYSWGEGDDGKLG--HGNRLMYDRPKLIEELLGTEIVDIACGGH-- 4408

Query: 61   CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                       HS A+   G ++TWG   +G+LG    D + Q  PK V+ L    V+  
Sbjct: 4409 -----------HSAAITSAGWLYTWGKGRYGRLG--HGDSEDQLTPKLVEALQDYKVIDV 4455

Query: 121  CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
                                    CGS  +Q +              +     +++WG+ 
Sbjct: 4456 -----------------------ACGSGDAQTL-------------CVTDDDNVWSWGDG 4479

Query: 181  EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
            +YG++G   S+     P ++ESL  L +  + CG+  S  L++S + +Y +G G
Sbjct: 4480 DYGKLGRGGSDGCKI-PMKIESLAGLGVIKVECGSQFSVALTRSGA-IYTWGKG 4531



 Score = 69.7 bits (169), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 104/236 (44%), Gaps = 43/236 (18%)

Query: 7    SLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+ +  G ++ WG +  GQLG LE A  K   +P   + L+++  VQ   G    L +T
Sbjct: 4252 TLSWDGSGAIYGWGHNHRGQLGGLEGAKVK---LPVLCESLSALRPVQLTGGEQTLLAVT 4308

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV--VQACAG 123
            +             G+V+  G    G+LG+   D  S  +P  ++ +  V V  V   +G
Sbjct: 4309 AD------------GKVYATGYGAAGRLGIGGTD--SVMVPTLLESIQHVFVKKVAVNSG 4354

Query: 124  YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTI------------------ 165
              HCL L+S G V       G G D   G  + L+ D    I                  
Sbjct: 4355 GKHCLALSSEGHVYSW----GEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHS 4410

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
             ++ S G LYTWG   YG++G  +S   +T P+ VE+L +  +  +ACG+  +  L
Sbjct: 4411 AAITSAGWLYTWGKGRYGRLGHGDSEDQLT-PKLVEALQDYKVIDVACGSGDAQTL 4465



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 54/222 (24%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+++  G  T+G+LGL   D  +   PK +  L+   +++  A +S         G  H+
Sbjct: 3306 GKLYACGEGTNGRLGL--GDDSNVCEPKLIPFLSQY-MIKKVAVHS---------GGKHA 3353

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL   G++F+WG    G+LG    +  S   P+ ++ L S  +     G  H   +TSS
Sbjct: 3354 LALTQDGKIFSWGEGEDGKLG--HGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSS 3411

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            G                                      ELYTWG  EYG++G  ++ T 
Sbjct: 3412 G--------------------------------------ELYTWGLGEYGRLGHGDTATQ 3433

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSV-SRLYAFGIG 234
            + KP+ V+SLV   +  +ACG+  +  ++ +    +Y++G G
Sbjct: 3434 M-KPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDG 3474



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 107/251 (42%), Gaps = 59/251 (23%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL     V++WG    G+LG    D+     PK V+ L   ++     G ++  VL+
Sbjct: 508 HYLALTQDSSVYSWGNGDGGRLG--HGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLS 565

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
           S             GE++TWG   +G+LG  ++D  +  IP  V  L    VV  AC +G
Sbjct: 566 SN------------GELYTWGRGNYGRLGHGNSD--NVLIPTLVTALNGHMVVYVACGSG 611

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
            S  L +T+SG+V                                      ++WG+  YG
Sbjct: 612 DSQTLCVTASGIV--------------------------------------FSWGDGNYG 633

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPK 243
           ++G    + + T P+ V+ L+++ +A + CG   S  L+ +   +Y +G G   +L    
Sbjct: 634 KLGRGGCDGSKT-PKIVDKLLDINVAKVYCGGQFSAALT-AYGEVYTWGKGEGYRLGHGN 691

Query: 244 SVH-KTPQLIH 253
             H + P++I 
Sbjct: 692 EEHIRYPKVIE 702



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 96/234 (41%), Gaps = 33/234 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S  L+  GE++TWG   +G+LG  ++D  +  IP  V  L    VV    G     
Sbjct: 557 GSTYSAVLSSNGELYTWGRGNYGRLGHGNSD--NVLIPTLVTALNGHMVVYVACG----- 609

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +L +   G VF+WG   +G+LG    D      PK V  L  ++V +   
Sbjct: 610 -----SGDSQTLCVTASGIVFSWGDGNYGKLGRGGCD--GSKTPKIVDKLLDINVAKVYC 662

Query: 123 GYSHCLVLTSSGVVTCTHKENGC----GSD------------PSQGVQSNLVQDSHTTIT 166
           G      LT+ G V    K  G     G++              + V+   V + H  + 
Sbjct: 663 GGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFH--VL 720

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
           +L     +Y WG N+YGQ+      T V +P    +L    I  +ACG   SF 
Sbjct: 721 ALTEDQLVYGWGRNDYGQID-PALGTIVPEPTLCPTLSGKNIIGLACGLTQSFA 773



 Score = 50.1 bits (118), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 53/215 (24%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+RV G +   V           ++ S +   H LAL     V++WG    G+LG    D
Sbjct: 486 PQRVYGFSEKPVT----------MIASHSDGTHYLALTQDSSVYSWGNGDGGRLG--HGD 533

Query: 100 KKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQ 159
           +     PK V+ L   ++     G ++  VL+S+G                         
Sbjct: 534 RVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNG------------------------- 568

Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                        ELYTWG   YG++G  NS+  +  P  V +L    +  +ACG+  S 
Sbjct: 569 -------------ELYTWGRGNYGRLGHGNSDNVLI-PTLVTALNGHMVVYVACGSGDSQ 614

Query: 220 VLSKSVSRL-YAFGIGSAVQLDSPK-SVHKTPQLI 252
            L  + S + +++G G+  +L        KTP+++
Sbjct: 615 TLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIV 649



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            TG  H +A  D GEVFTWG +  GQLG       +   P+ V  L    + +   G +H 
Sbjct: 4563 TGSLHCVACTDKGEVFTWGDNDEGQLG--DGTTSALQRPRLVHALQGKKITRVACGSAHT 4620

Query: 62   LVLTS 66
            L  ++
Sbjct: 4621 LAWST 4625


>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Canis lupus familiaris]
          Length = 529

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 98/231 (42%), Gaps = 56/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV   A    C 
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVVNIACGQMC- 216

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ + GEV+ WG + +GQLGL S+   +Q  P R+  L  + + +   
Sbjct: 217 ----------SMAVVNTGEVYVWGYNGNGQLGLGSSG--NQPTPCRIAALQGIRIQRVAC 264

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 265 GYAHTLVLTDE--------------------------------------GQVYAWGANSY 286

Query: 183 GQMGINN-SNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  + + AC + H+         +Y +G
Sbjct: 287 GQLGTGNKSNQSYPAPVVVEK--DRIVEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 47.4 bits (111), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 2/84 (2%)

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           GE++TWG+N Y Q+G   +N  +       +L N  +  +ACG+ HS VL+ S   ++A+
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLT-SDGEVFAW 176

Query: 232 GIGSAVQLDSPKSVHK-TPQLIHG 254
           G  ++ Q+ S  + ++  P+ + G
Sbjct: 177 GYNNSGQVGSGSTANQPIPRRVTG 200


>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 494

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 131/277 (47%), Gaps = 41/277 (14%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL   G V+ WG ++ GQLG  +       +P +V+GL+ V  V A +         
Sbjct: 7   HSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQVQGLSEVVAVDAGSS-------- 58

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 HSLA+   G V+ WG +  GQLG E+    S+S P +V GL+ V  V   AG S
Sbjct: 59  ------HSLAVRSDGTVWAWGSNASGQLGDET--TISRSTPVQVLGLSGVLFV--AAGSS 108

Query: 126 HCLVLTSSGVV----TCTHKENGCGSD-----PSQ-----GVQSNLVQDSHTTITSLNSP 171
           H L L   G V    + +  + G G+      P Q     GV +    D+H+   ++ S 
Sbjct: 109 HVLALRYDGTVWAWGSNSSGQRGDGTTNNRALPVQAQGLSGVMAVAAGDNHS--LAVRSD 166

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G  + WG+N  GQ+G     TT  +P+ V+      +  +A G+ HS  + +S   ++A+
Sbjct: 167 GSAWAWGSNASGQLG---EGTTSNRPEPVQVQGLSGVVAVAAGSAHSLAV-RSDGTVWAW 222

Query: 232 GIGSAVQLDSPKSVHK-TPQLIHGPWIASPVAMTAGE 267
           G  ++ QL    +  +  P  + G  ++  VA+ AG 
Sbjct: 223 GANASGQLGDGTTTDRLVPVQVQG--LSGVVAVAAGH 257



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 104/230 (45%), Gaps = 42/230 (18%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLA+   G V+ WG +  GQLG        + +P +V+GL+ V  V   AG+ H     
Sbjct: 209 HSLAVRSDGTVWAWGANASGQLG--DGTTTDRLVPVQVQGLSGV--VAVAAGHHH----- 259

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS--IPKRVKGLASVSVVQACAG 123
                  SLA+ + G V+ WG +   QLG     K S    +P +V+GL+  +VV   AG
Sbjct: 260 -------SLAVRNDGTVWGWGRNDSNQLG-----KGSMRLLVPAQVQGLS--AVVAVAAG 305

Query: 124 YSHCLVLTSSGVVTCTHKEN----GCGSDPSQ--------GVQSNLVQDSHTTITSLNSP 171
            +H L + S G V      N    G G+   +        GV S    D H+   ++ S 
Sbjct: 306 DTHSLAVGSDGTVWAVGSNNNGQLGDGTTTYRLVPVPVLSGVVSVAANDYHS--LAVRSD 363

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
           G ++ WG N  GQ+G + + TT   P +V  L    +  +  G  HS  +
Sbjct: 364 GTVWAWGYNSTGQLG-DGTTTTRLVPVQVSGLSE--VVSVVAGGYHSLAV 410



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 100/233 (42%), Gaps = 65/233 (27%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQS--IPKRVKGLASVSVVQACAGYSHCLV 63
           HSLA+ + G V+ WG +   QLG     K S    +P +V+GL++V  V   AG +H L 
Sbjct: 259 HSLAVRNDGTVWGWGRNDSNQLG-----KGSMRLLVPAQVQGLSAV--VAVAAGDTHSLA 311

Query: 64  LTSTTGLW------------------------------------HSLALNDCGEVFTWGG 87
           + S   +W                                    HSLA+   G V+ WG 
Sbjct: 312 VGSDGTVWAVGSNNNGQLGDGTTTYRLVPVPVLSGVVSVAANDYHSLAVRSDGTVWAWGY 371

Query: 88  DTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV----TCTHKEN 143
           ++ GQLG       ++ +P +V GL+ V  V   AG  H L + S G      +  + + 
Sbjct: 372 NSTGQLG--DGTTTTRLVPVQVSGLSEV--VSVVAGGYHSLAVRSDGSAWDWGSNAYGQL 427

Query: 144 GCGSD-----PSQ-----GVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG 186
           G GS      P +     GV +     SH+   +L S G ++TWG N +GQ+G
Sbjct: 428 GDGSTTYLPVPVRVQQLSGVGAVASGSSHSL--ALRSDGTVWTWGYNSFGQLG 478



 Score = 46.6 bits (109), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 16/94 (17%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           + G +HSLA+   G  + WG + +GQLG  S       +P RV+ L+ V  V   +G SH
Sbjct: 401 VAGGYHSLAVRSDGSAWDWGSNAYGQLGDGS--TTYLPVPVRVQQLSGVGAV--ASGSSH 456

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLG 94
                       SLAL   G V+TWG ++ GQLG
Sbjct: 457 ------------SLALRSDGTVWTWGYNSFGQLG 478


>gi|47212900|emb|CAF90790.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2131

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 134/286 (46%), Gaps = 45/286 (15%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  ++V+ A  G+    ++TS     HS
Sbjct: 1171 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 1219

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            +AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ   G +       +
Sbjct: 1220 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQVGRGRA-----AGA 1272

Query: 134  GVVTCTHK-----ENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGIN 188
            G+  C        +  CG               H+ + + +  G+L+T+GN +YG++G+ 
Sbjct: 1273 GLCRCRSHLHLRLQMSCGF-------------KHSAVVTAD--GKLFTFGNGDYGRLGLG 1317

Query: 189  NSNTTVTKPQRVESLVNLPI---ALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            N++     P+RV +L    I   A +ACG NH+ V+S     ++AFG G   +L    S 
Sbjct: 1318 NTSNK-KLPERVAALEGYQIGQVANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNST 1376

Query: 246  HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
             K+   +    + SP   T  ++  V    G+ +KK+  G   S+ 
Sbjct: 1377 AKSSPQVWAVILQSP---TLCQELKVDVLCGISIKKVACGTQFSVA 1419



 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 123/276 (44%), Gaps = 75/276 (27%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ------ACAGYS 59
            HS+AL + GEVF+WG   +G+LG  ++D+  Q  P++++ L    VVQ      A AG  
Sbjct: 1218 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQVGRGRAAGAGLC 1275

Query: 60   HC-----LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS 114
             C     L L  + G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L  
Sbjct: 1276 RCRSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNK--KLPERVAALEG 1333

Query: 115  VSVVQ----ACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNS 170
              + Q    AC G +H LV+++ G++                                  
Sbjct: 1334 YQIGQVANVAC-GLNHTLVVSADGMM---------------------------------- 1358

Query: 171  PGELYTWGNNEYGQMGINNSNTTVTKPQ---------------RVESLVNLPIALIACGA 215
               ++ +G+ +YG++G+ NS T  + PQ               +V+ L  + I  +ACG 
Sbjct: 1359 ---VWAFGDGDYGKLGLGNS-TAKSSPQVWAVILQSPTLCQELKVDVLCGISIKKVACGT 1414

Query: 216  NHSFVLSKSVSRLYAFGIGSAVQL-DSPKSVHKTPQ 250
              S  L+K   R++ FG    + L +S    H  PQ
Sbjct: 1415 QFSVALTKD-GRVFTFGQDRLIGLPESRARNHNRPQ 1449



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 115/275 (41%), Gaps = 48/275 (17%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS  +   G++FT+G   +G+LGL +   K   +P+RV  L          GY    
Sbjct: 1290 GFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKK--LPERVAALE---------GYQIGQ 1338

Query: 63   VLTSTTGLWHSLALNDCGE-VFTWGGDTHGQLGLESADKKSQSIPK-------------- 107
            V     GL H+L ++  G  V+ +G   +G+LGL ++  KS   P+              
Sbjct: 1339 VANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSS--PQVWAVILQSPTLCQE 1396

Query: 108  -RVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQG-------------- 152
             +V  L  +S+ +   G    + LT  G V    ++   G   S+               
Sbjct: 1397 LKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNHNRPQQLPALSG 1456

Query: 153  --VQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL 210
              VQ   V   HT   +L+S G++Y WG+N  GQ+G+ ++N  V +P  V  L    I  
Sbjct: 1457 VHVQDVAVGAEHTL--ALSSTGDVYAWGSNSEGQLGLGHTN-HVREPTVVTMLQGKHIHQ 1513

Query: 211  IACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
            ++ G  HS   +       A G    +QL  P +V
Sbjct: 1514 VSAGRCHSAAWTAPSLPPRAPGSSVPLQLGLPVAV 1548



 Score = 40.4 bits (93), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 77/184 (41%), Gaps = 30/184 (16%)

Query: 65   TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
            TS    WH   L    +VF WG   HGQL   +   ++  +P      +     Q   G 
Sbjct: 1110 TSRPEDWH---LGGKCDVFLWGAGRHGQL---AEAGRNILVPTTAPSFSQAQ--QVVCGQ 1161

Query: 125  SHCLVLTSSG-VVTCTHKENG-CGSDPS------------QG-VQSNLV----QDSHTTI 165
            +   V+  +G V+ C     G  G   S            QG V + LV     D H+  
Sbjct: 1162 NCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-- 1219

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   GE+++WG+ +YG++G  NS+    +P+++E+L    +  +  G      L +  
Sbjct: 1220 MALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQVGRGRAAGAGLCRCR 1278

Query: 226  SRLY 229
            S L+
Sbjct: 1279 SHLH 1282


>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
            HERC2-like [Bombus terrestris]
          Length = 5151

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 29/234 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   G ++TWG   +G+LG    D + Q  PK V+ L    V+    G     
Sbjct: 4439 GGHHSAAITSAGWLYTWGKGRYGRLG--HGDSEDQLTPKLVEALQDYKVIDVACG----- 4491

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L + D   V++WG   +G+LG   +D     IP +++ LA + V++   
Sbjct: 4492 -----SGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSD--GCKIPMKIESLAGLGVIKVEC 4544

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSL 168
            G    + LT SG +    K +    G G+D            QG +   +        + 
Sbjct: 4545 GSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVAC 4604

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               GE++TWG+N+ GQ+G + + + + +P+ V +L    I  +ACG+ H+   S
Sbjct: 4605 TDKGEVFTWGDNDEGQLG-DGTTSALQRPRLVHALQGKKITRVACGSAHTLAWS 4657



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 120/269 (44%), Gaps = 35/269 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+LAL   G++F+WG    G+LG    +  S   P+ ++ L S  +     G  H 
Sbjct: 3353 SGGKHALALTQDGKIFSWGEGEDGKLG--HGNSVSLDKPRLIESLKSKRIRDIACGSGHS 3410

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE++TWG   +G+LG    D  +Q  PK V+ L    V+Q  
Sbjct: 3411 AAITSS------------GELYTWGLGEYGRLG--HGDTATQMKPKLVQSLVGQRVIQVA 3456

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQDSHTTIT----------- 166
             G   +  + LT+ G V      +    G   S G  + L+ D    +            
Sbjct: 3457 CGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFS 3516

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   GE++TWG  +Y ++G  N +  V KP  VE L    +  +A GA H   ++ + 
Sbjct: 3517 LALTKYGEVWTWGKGDYFRLGHGNDH-HVRKPTLVEGLRGKKVVHVAVGALHCLAVTDT- 3574

Query: 226  SRLYAFGIGSAVQLDSPKS-VHKTPQLIH 253
             ++YA+G     Q  +  + V+K P L+H
Sbjct: 3575 GQVYAWGDNDHGQQGNGSTIVNKKPSLVH 3603



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 105/234 (44%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +Q  PK V+ L    V+Q   G     
Sbjct: 3406 GSGHSAAITSSGELYTWGLGEYGRLG--HGDTATQMKPKLVQSLVGQRVIQVACGSRDA- 3462

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      ++AL   G V++WG    G+LG   +D      P  +  L  + VVQ   
Sbjct: 3463 ---------QTMALTADGSVYSWGDGDFGKLGRGGSD--GCYTPLLIDRLNGLGVVQIEC 3511

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT  G V    K +    G G+D     P+  +G++   V   H  + +L+  
Sbjct: 3512 GAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKV--VHVAVGALHCL 3569

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N S     KP  V  L +  +  ++CG++HS  
Sbjct: 3570 AVTDTGQVYAWGDNDHGQQG-NGSTIVNKKPSLVHELDDARVNRVSCGSSHSIA 3622



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 98/234 (41%), Gaps = 56/234 (23%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSH 60
            +G  H LAL+  G V++WG    G+LG    ++     PK ++ L    +V  AC G+  
Sbjct: 4386 SGGKHCLALSSEGHVYSWGEGDDGKLG--HGNRLMYDRPKLIEELLGTEIVDIACGGH-- 4441

Query: 61   CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                       HS A+   G ++TWG   +G+LG    D + Q  PK V+ L    V+  
Sbjct: 4442 -----------HSAAITSAGWLYTWGKGRYGRLG--HGDSEDQLTPKLVEALQDYKVIDV 4488

Query: 121  CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
                                    CGS  +Q +              +     +++WG+ 
Sbjct: 4489 -----------------------ACGSGDAQTL-------------CVTDDDNVWSWGDG 4512

Query: 181  EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
            +YG++G   S+     P ++ESL  L +  + CG+  S  L++S   +Y +G G
Sbjct: 4513 DYGKLGRGGSDGCKI-PMKIESLAGLGVIKVECGSQFSVALTRS-GAIYTWGKG 4564



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 104/236 (44%), Gaps = 43/236 (18%)

Query: 7    SLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+ +  G ++ WG +  GQLG LE A  K   +P   + L+++  VQ   G    L +T
Sbjct: 4285 TLSWDGSGAIYGWGHNHRGQLGGLEGAKVK---LPVLCESLSALRPVQLTGGEQTLLAVT 4341

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV--VQACAG 123
            +             G+V+  G    G+LG+   D  S  +P  ++ +  V V  V   +G
Sbjct: 4342 AD------------GKVYATGYGAAGRLGIGGTD--SVMVPTLLESIQHVFVKKVAVNSG 4387

Query: 124  YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTI------------------ 165
              HCL L+S G V       G G D   G  + L+ D    I                  
Sbjct: 4388 GKHCLALSSEGHVYSW----GEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHS 4443

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
             ++ S G LYTWG   YG++G  +S   +T P+ VE+L +  +  +ACG+  +  L
Sbjct: 4444 AAITSAGWLYTWGKGRYGRLGHGDSEDQLT-PKLVEALQDYKVIDVACGSGDAQTL 4498



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 107/251 (42%), Gaps = 59/251 (23%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL     V++WG    G+LG    D+     PK V+ L   ++     G ++  VL+
Sbjct: 516 HYLALTQDSSVYSWGNGDGGRLG--HGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLS 573

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
           S             GE++TWG   +G+LG  ++D  +  IP  V  L    VV  AC +G
Sbjct: 574 SN------------GELYTWGRGNYGRLGHGNSD--NVLIPTLVTALNGHMVVHVACGSG 619

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
            S  L +T+SG+V                                      ++WG+  YG
Sbjct: 620 DSQTLCVTASGIV--------------------------------------FSWGDGNYG 641

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPK 243
           ++G    + + T P+ V+ L+++ +A + CG   S  L+ +   +Y +G G   +L    
Sbjct: 642 KLGRGGCDGSKT-PKIVDKLLDINVAKVYCGGQFSAALT-AYGEVYTWGKGEGYRLGHGN 699

Query: 244 SVH-KTPQLIH 253
             H + P++I 
Sbjct: 700 EEHIRYPKVIE 710



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 54/222 (24%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+++  G  T+G+LGL   D  +   PK +  L+   + +          +   +G  H+
Sbjct: 3311 GKLYACGEGTNGRLGL--GDDSNVCEPKLIPFLSQYMIKK----------MAVHSGGKHA 3358

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL   G++F+WG    G+LG    +  S   P+ ++ L S  +     G  H   +TSS
Sbjct: 3359 LALTQDGKIFSWGEGEDGKLG--HGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSS 3416

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            G                                      ELYTWG  EYG++G  ++ T 
Sbjct: 3417 G--------------------------------------ELYTWGLGEYGRLGHGDTATQ 3438

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSV-SRLYAFGIG 234
            + KP+ V+SLV   +  +ACG+  +  ++ +    +Y++G G
Sbjct: 3439 M-KPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDG 3479



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 97/234 (41%), Gaps = 33/234 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S  L+  GE++TWG   +G+LG  ++D  +  IP  V  L    VV    G     
Sbjct: 565 GSTYSAVLSSNGELYTWGRGNYGRLGHGNSD--NVLIPTLVTALNGHMVVHVACG----- 617

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +L +   G VF+WG   +G+LG    D      PK V  L  ++V +   
Sbjct: 618 -----SGDSQTLCVTASGIVFSWGDGNYGKLGRGGCD--GSKTPKIVDKLLDINVAKVYC 670

Query: 123 GYSHCLVLTSSGVVTCTHKENGC----GSDP------------SQGVQSNLVQDSHTTIT 166
           G      LT+ G V    K  G     G++             ++ V+   V + H  + 
Sbjct: 671 GGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFH--VL 728

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
           +L     +Y WG N+YGQ+      T V +P    +L    I  +ACG   SF 
Sbjct: 729 ALTEDQLVYGWGRNDYGQID-PALGTVVPEPTLCPTLSGKNIIGLACGLTQSFA 781



 Score = 49.7 bits (117), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 53/215 (24%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+RV G +   V           ++ S +   H LAL     V++WG    G+LG    D
Sbjct: 494 PQRVYGFSEKPVT----------MIASHSDGTHYLALTQDSSVYSWGNGDGGRLG--HGD 541

Query: 100 KKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQ 159
           +     PK V+ L   ++     G ++  VL+S+G                         
Sbjct: 542 RVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNG------------------------- 576

Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                        ELYTWG   YG++G  NS+  +  P  V +L    +  +ACG+  S 
Sbjct: 577 -------------ELYTWGRGNYGRLGHGNSDNVLI-PTLVTALNGHMVVHVACGSGDSQ 622

Query: 220 VLSKSVSRL-YAFGIGSAVQLDSPK-SVHKTPQLI 252
            L  + S + +++G G+  +L        KTP+++
Sbjct: 623 TLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIV 657



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            TG  H +A  D GEVFTWG +  GQLG       +   P+ V  L    + +   G +H 
Sbjct: 4596 TGSLHCVACTDKGEVFTWGDNDEGQLG--DGTTSALQRPRLVHALQGKKITRVACGSAHT 4653

Query: 62   LVLTS 66
            L  ++
Sbjct: 4654 LAWST 4658


>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
 gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
          Length = 3806

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 106/234 (45%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A++  GE++TWG   +G+LG    D  +Q  PK V  LA   VVQ   G     
Sbjct: 2788 GSSHSAAISSQGELYTWGLGEYGRLG--HGDNTTQLKPKLVTALAGRRVVQVACGSRDA- 2844

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL + G VF+WG    G+LG      +    P  ++ L+ + VVQ   
Sbjct: 2845 ---------QTLALTEDGAVFSWGDGDFGKLG--RGGSEGSDTPHEIERLSGIGVVQIEC 2893

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-------PSQGVQSNLVQDSHTTITSLN-- 169
            G    L LT +G V    K +    G G D       P  G++   V   H  + +L+  
Sbjct: 2894 GAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRV--IHVAVGALHCL 2951

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G  N+     KP  V  L  + +  +ACG++HS  
Sbjct: 2952 AVTDAGQVYAWGDNDHGQQGSGNTFVN-KKPALVIGLDAVFVNRVACGSSHSIA 3004



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 120/270 (44%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+LAL   G+VF+WG    G+LG    ++ +   P+ V+ L +  +     G S  
Sbjct: 2735 SGGKHALALTLDGKVFSWGEGEDGKLG--HGNRTTLDKPRLVEALRAKKIRDVACGSS-- 2790

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      HS A++  GE++TWG   +G+LG    D  +Q  PK V  LA   VVQ  
Sbjct: 2791 ----------HSAAISSQGELYTWGLGEYGRLG--HGDNTTQLKPKLVTALAGRRVVQVA 2838

Query: 122  AGY--SHCLVLTSSGVVTC--------THKENGCGSDPSQ------GVQSNLVQDSHTTI 165
             G   +  L LT  G V            +    GSD         G+    ++      
Sbjct: 2839 CGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFS 2898

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   GE++TWG  +Y ++G +  +  V KPQ +  L    +  +A GA H   ++ + 
Sbjct: 2899 LALTRAGEVWTWGKGDYYRLG-HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDA- 2956

Query: 226  SRLYAFGIGSAVQLDSPKS-VHKTPQLIHG 254
             ++YA+G     Q  S  + V+K P L+ G
Sbjct: 2957 GQVYAWGDNDHGQQGSGNTFVNKKPALVIG 2986



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 53/209 (25%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  +P ++  L    VV+  A +S         G  H+
Sbjct: 2693 GKVYACGEGTNGRLGL--GVTHNVPLPHQLPVLHQY-VVKKVAVHS---------GGKHA 2740

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL   G+VF+WG    G+LG    ++ +   P+ V+ L +  +     G SH   ++S 
Sbjct: 2741 LALTLDGKVFSWGEGEDGKLG--HGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQ 2798

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            G                                      ELYTWG  EYG++G +  NTT
Sbjct: 2799 G--------------------------------------ELYTWGLGEYGRLG-HGDNTT 2819

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLS 222
              KP+ V +L    +  +ACG+  +  L+
Sbjct: 2820 QLKPKLVTALAGRRVVQVACGSRDAQTLA 2848



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 108/238 (45%), Gaps = 31/238 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   G + TWG  T+ +LG  ++D +  S+P  V  L+   VV    G     
Sbjct: 330 GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDR--SLPTLVVALSDHMVVDVALG----- 382

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G  HSLAL   G VF WG   +G+LG  + +   Q  P  V+ L  V  V A +
Sbjct: 383 -----SGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQ--PILVESLPRVQRVFAGS 435

Query: 123 GYSHCLV----LTSSGVVTCTHKE------NGCGSDPS--QGVQSNLVQDSHTTIT---S 167
            +S  L     L + G  TC   +       GC S P     +Q   + D   ++    +
Sbjct: 436 QFSVALSSEGQLYTWGKATCLGHQLVERSVQGC-SVPRLVSSLQHKRIVDVAVSVAHCLA 494

Query: 168 LNSPGELYTWGNNEYGQM-GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
           L+S GE++ WG N+  Q+   + S+  + +   + SL   P + IAC +  S V ++S
Sbjct: 495 LSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSLPTFPASGIACTSAQSLVWTQS 552



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 96/229 (41%), Gaps = 60/229 (26%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LA++     ++WG     +LG    D  ++++P ++  L      Q C    +C    
Sbjct: 281 HFLAIDSNHNAYSWGTGEDHRLG--HGDTHARAVPTKIAALE-----QHCVQSVYC---- 329

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC--AG 123
              G  +S A+   G + TWG  T+ +LG  ++D +S  +P  V  L+   VV     +G
Sbjct: 330 ---GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRS--LPTLVVALSDHMVVDVALGSG 384

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
            +H L LTS G+V                                      + WG+ +YG
Sbjct: 385 DAHSLALTSEGLV--------------------------------------FAWGDGDYG 406

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           ++G  N N ++ +P  VESL    +  +  G+  S  LS S  +LY +G
Sbjct: 407 KLGNGNCNGSL-QPILVESLPR--VQRVFAGSQFSVALS-SEGQLYTWG 451


>gi|302756937|ref|XP_002961892.1| hypothetical protein SELMODRAFT_76253 [Selaginella moellendorffii]
 gi|300170551|gb|EFJ37152.1| hypothetical protein SELMODRAFT_76253 [Selaginella moellendorffii]
          Length = 414

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 72/138 (52%), Gaps = 17/138 (12%)

Query: 938  LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIV 997
             C YPF+FD  +K+ +L+MD   QM            L++        YL + V RD +V
Sbjct: 4    FCQYPFVFDPSSKSKILQMDSIFQMTEEFEDA----ILRSVFIGMTCPYLILRVRRDFLV 59

Query: 998  EDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILD 1057
             DTI ++ Q    D KKPLKV             F GEE  D GGV++EF  LL++E+ +
Sbjct: 60   RDTIVQI-QEQLGDLKKPLKV------------VFVGEEGIDEGGVQKEFFQLLVRELFN 106

Query: 1058 PKYGMFKEYEETRSIWFS 1075
            P+YGMF   +E R  WF+
Sbjct: 107  PQYGMFSYSDEARCFWFN 124



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 24/117 (20%)

Query: 719 HYGITEY-EETRSIWF----SEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKI 773
            YG+  Y +E R  WF    SE  F+ +    L+G L GLAIYN  I+++ FP  +YKK+
Sbjct: 108 QYGMFSYSDEARCFWFNATPSELNFDTEFE--LVGILLGLAIYNGHILDLHFPTVVYKKL 165

Query: 774 LDEPILLQDLK----------------DLSPTLAKSLQDILDYREPDLEDVFGITFR 814
           L +P+ L DL                  + P L K L+ +L +   D+E+ +  TF+
Sbjct: 166 LGKPLALDDLGQVWQLRPRKALKTMFLQVKPDLGKGLEHLLRF-TGDVEETYSRTFQ 221


>gi|241953259|ref|XP_002419351.1| E3 ubiquitin-protein ligase, putative [Candida dubliniensis CD36]
 gi|223642691|emb|CAX42945.1| E3 ubiquitin-protein ligase, putative [Candida dubliniensis CD36]
          Length = 894

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 86/154 (55%), Gaps = 18/154 (11%)

Query: 937  FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTL-NQYLEVEVSRDN 995
            ++C YPF+    AK ++LE + R QME    +     F+ + +   + + Y  + V RD+
Sbjct: 492  YICQYPFLISLGAKISVLEYEARRQMERKAEEA----FINSLDKRVIIDVYFRIRVRRDH 547

Query: 996  IVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEI 1055
            IV+D+++ + +  +++ KK L+V            +F  E   DAGG+++E+ +LL KEI
Sbjct: 548  IVQDSLQYI-KTNSDNLKKSLRV------------QFVNEPGVDAGGLKKEWFLLLTKEI 594

Query: 1056 LDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              P+ GMF   +++  +WF+    E+ +MY+L G
Sbjct: 595  FHPQSGMFHNVDDSNFLWFNIIPVENPDMYYLFG 628



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 15/110 (13%)

Query: 712 YPKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYK 771
           +P++G+ H      +++  +WF+    E+ +M +L G + GLAIYN TI+++ FP+ALYK
Sbjct: 596 HPQSGMFH----NVDDSNFLWFNIIPVENPDMYYLFGAILGLAIYNSTILDLQFPIALYK 651

Query: 772 KILDEPILLQDLKDLSPTLAKSL--------QDILDYR---EPDLEDVFG 810
            +L   +  +D + L P   K+L        ++ILD     E    D+FG
Sbjct: 652 ILLKRGLDREDYRKLYPVSFKNLINLKTMTNKEILDLDLTFEVSYSDMFG 701


>gi|453086468|gb|EMF14510.1| HECT-domain-containing protein [Mycosphaerella populorum SO2202]
          Length = 1281

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 24/202 (11%)

Query: 893  TPAPHGGR--KVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAK 950
            +PA    R  ++ +T+ +   L    D+  D+  W   R   +     C YP       K
Sbjct: 798  SPAAKAKRSGQLLHTSSFYNTLLDYLDMVEDFKEWEKKREKFT----FCQYPLFISIGTK 853

Query: 951  TTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYT-- 1008
              +LE D + QM  A+     Y F Q F     + +  + V RD IVED++R++++    
Sbjct: 854  IKILEFDAQRQM--ALKAREAY-FDQIFRSQRSDGHFHLRVRRDCIVEDSLRQISEAVGS 910

Query: 1009 -TNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYE 1067
               D KK ++V+            F GEE  DAGG R+E+ ++L+++I DP +GMF   +
Sbjct: 911  GQEDLKKGMRVH------------FAGEEGVDAGGPRKEWFLMLVRDIFDPNHGMFVYDD 958

Query: 1068 ETRSIWFSEDTFEDQNMYFLIG 1089
            ++ + +F+  +FE  + Y L+G
Sbjct: 959  DSNTCYFNPSSFETSDQYHLVG 980



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 24/119 (20%)

Query: 718  NHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            NH      +++ + +F+  +FE  +   L+G L GLAIYN TI+++  P   ++K+L   
Sbjct: 950  NHGMFVYDDDSNTCYFNPSSFETSDQYHLVGVLLGLAIYNSTILDVALPPFAFRKLLAAA 1009

Query: 778  -----------------------ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                                     LQDL +  P+LA  LQ +LDY + D+++ +   F
Sbjct: 1010 PASITGTSNHNVSSLTGTKGQMTYTLQDLAEFRPSLAAGLQQLLDY-DGDVQETYCRDF 1067


>gi|390336382|ref|XP_786362.2| PREDICTED: ubiquitin-protein ligase E3A-like [Strongylocentrotus
            purpuratus]
          Length = 906

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 25/207 (12%)

Query: 885  GRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFI 944
            G TV + R P       + ++ FY   L    ++  D+  +   +     R    NYPFI
Sbjct: 464  GLTVLDCRKPL------IPFSEFYNEPLNDQLEVDHDFTCY---KKESDGRFAFLNYPFI 514

Query: 945  FDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIREL 1004
                 K+T L  D R++M H    T     +Q      +N YL+++V RD++V+D++  L
Sbjct: 515  LTPATKSTGLYYDSRVRMFHERRLTLLNSLVQG---EEINPYLKLKVRRDHVVDDSLVRL 571

Query: 1005 AQYTTNDFKKPLKVNDTSPIYLAPQ--VKFRGEEAEDAGGVRREFLMLLLKEILDPKYGM 1062
                 ++           P+ L  Q  V+F GE+  D GGV +EF  L+++EI +P  GM
Sbjct: 572  EMIAVDN-----------PMDLKKQLYVEFEGEQGVDEGGVSKEFFQLVIQEIFNPDIGM 620

Query: 1063 FKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            F    + ++ WF+  +FE    Y LIG
Sbjct: 621  FTHNSDLQTYWFNPTSFETNRQYTLIG 647



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 1/96 (1%)

Query: 723 TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQD 782
           T   + ++ WF+  +FE      LIG L GLAIYN  I+++ FP+ +Y+K++    +  D
Sbjct: 622 THNSDLQTYWFNPTSFETNRQYTLIGILLGLAIYNNVILDVTFPMVVYRKLMGRRGVFAD 681

Query: 783 LKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYL 818
           L D  P L  SL+ +L++ E  +E+ F + F   Y+
Sbjct: 682 LHDAQPVLYNSLKALLEH-EDTVEETFLMNFMISYI 716


>gi|345325115|ref|XP_001514077.2| PREDICTED: RCC1 and BTB domain-containing protein 2
           [Ornithorhynchus anatinus]
          Length = 721

 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 98/245 (40%), Gaps = 56/245 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSL L   GEV+ WG +  GQ+G  S    +Q IP+RV       +    A    C 
Sbjct: 330 GSHHSLVLTSDGEVYAWGYNNSGQVG--SGSTANQPIPRRVTSCLQNKIATNIACGQMC- 386

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ + GEV+ WG + +GQLGL S+   +Q  P R+  L  + V +   
Sbjct: 387 ----------SMAVVESGEVYVWGYNGNGQLGLGSSG--NQPTPCRIAALQGIRVQRVTC 434

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT  G                                      +LY WG N Y
Sbjct: 435 GYAHTLVLTDEG--------------------------------------QLYAWGANSY 456

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G      +  
Sbjct: 457 GQLGTGNKSNQSYPIPVPVEK--DRIIEIAACHSAHTSAAKTQSGHVYMWGQCRGQSVTL 514

Query: 242 PKSVH 246
           P   H
Sbjct: 515 PHLTH 519



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 1/78 (1%)

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           + GE+YTWG+N Y Q+G   +N  +       +LVN  +  +ACG++HS VL+ S   +Y
Sbjct: 286 AEGEVYTWGHNAYSQLGNGTTNHGLIPCHVSTNLVNKKVVEVACGSHHSLVLT-SDGEVY 344

Query: 230 AFGIGSAVQLDSPKSVHK 247
           A+G  ++ Q+ S  + ++
Sbjct: 345 AWGYNNSGQVGSGSTANQ 362


>gi|154281391|ref|XP_001541508.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150411687|gb|EDN07075.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 806

 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 111/232 (47%), Gaps = 29/232 (12%)

Query: 863  LQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRK--VAYTAFYMPDLATVCDIRI 920
            + +L   NS+ +         GG  +S +       GR+  +  +AFY   L    D+  
Sbjct: 322  MALLFSANSVTHNRRCDGPRPGGEEISRL----DGQGRRHLIPISAFYN-TLLDYSDLIA 376

Query: 921  DYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
            D+  W  GR NG      C Y F     AK  +LE D R QME    +     F      
Sbjct: 377  DFEAW-EGR-NGQFS--FCQYSFFLSIWAKIRILEHDARRQMEEKAREA---FFDSILGR 429

Query: 981  HTLNQYLEVEVSRDNIVEDTIRELAQYT---TNDFKKPLKVNDTSPIYLAPQVKFRGEEA 1037
              ++QYL ++V R+ + ED++R +++       + KK L++            +F GEE 
Sbjct: 430  RGVSQYLVLKVRRECLAEDSLRSVSEVVGTGQGEIKKGLRI------------EFLGEEG 477

Query: 1038 EDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             DAGG+R+E+ +LL++EI DP +G+F   E+++  +F+   FE    +FL+G
Sbjct: 478  VDAGGLRKEWFLLLVREIFDPLHGLFVYDEQSQYCYFNPYCFESSEQFFLVG 529



 Score = 60.8 bits (146), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 21/124 (16%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL------DEPIL 779
           E+++  +F+   FE     FL+G L GLAIYN TI+++  P   ++K+L      + P L
Sbjct: 507 EQSQYCYFNPYCFESSEQFFLVGVLLGLAIYNSTILDIALPPFAFRKLLACAPPNNVPAL 566

Query: 780 ----------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFERLI 829
                     L DL +  P LAK L+D+L+Y E D+++ F + F    ++  + Y ERL+
Sbjct: 567 STPQQSFKCTLDDLAEYQPALAKGLRDLLNY-EGDVQETFCLDF----VVQIERYGERLV 621

Query: 830 LIFK 833
           +  +
Sbjct: 622 IPLR 625


>gi|449453906|ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
           sativus]
          Length = 481

 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 129/293 (44%), Gaps = 47/293 (16%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS  +   GE++ WG +++GQLGL     K+  +P +V  L  + + +A  G  H     
Sbjct: 192 HSCVVTADGELYMWGVNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDH----- 246

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLG-------LESADKKSQSIPKRVKGLASVSVV 118
                  S+A+ D GEVF+WG    G+LG       L      S+  P+ +K L  + V 
Sbjct: 247 -------SIAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVK 299

Query: 119 QACAGYSHCLVLTSSGVV---------TCTHKENGCGSDPSQGVQSNLVQ-------DSH 162
              AG  H   +  +G V           +  E    + PS  + S L+          H
Sbjct: 300 HVAAGMLHSACVDENGAVYIFGERATNRVSFGEANKATTPS--LISTLLDCEEVACGGYH 357

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTK-PQRVES-LVNLPIALIACGANHSFV 220
           T +  L   G+LY+WG+NE G +G  N +T+V+  P+RVE      P++ ++CG  H+  
Sbjct: 358 TCV--LTKGGDLYSWGSNENGCLG--NGSTSVSHLPERVEGPFSKSPVSKVSCGWKHTAA 413

Query: 221 LSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWI--ASPVAMTAGEDSLV 271
           +S     ++ +G G +    S        QL HG  +    P  +  GE+  V
Sbjct: 414 ISGGA--IFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTKIDLGENVKV 464



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 135/319 (42%), Gaps = 45/319 (14%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+L L + G V+  G +  GQLG+ S +K+  + P  V+       +   AGY+H  V+T
Sbjct: 141 HTLFLTESGRVYATGLNNFGQLGI-SDEKRFSTEPVEVR--IPKEAMHISAGYNHSCVVT 197

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           +             GE++ WG +++GQLGL     K+  +P +V  L  + + +A  G  
Sbjct: 198 AD------------GELYMWGVNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSD 245

Query: 126 HCLVLTSSGVV----TCTHKENGCGSDPS-------------------QGVQSNLVQDSH 162
           H + +   G V           G G + +                   +G++   V    
Sbjct: 246 HSIAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGM 305

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
                ++  G +Y +G     ++    +N   T P  + +L  L    +ACG  H+ VL+
Sbjct: 306 LHSACVDENGAVYIFGERATNRVSFGEANKATT-PSLISTL--LDCEEVACGGYHTCVLT 362

Query: 223 KSVSRLYAFGIGSAVQL-DSPKSVHKTPQLIHGPWIASPVA-MTAGEDSLVSHSGGLVVK 280
           K    LY++G      L +   SV   P+ + GP+  SPV+ ++ G     + SGG +  
Sbjct: 363 KG-GDLYSWGSNENGCLGNGSTSVSHLPERVEGPFSKSPVSKVSCGWKHTAAISGGAIFT 421

Query: 281 KIYSGGDHSIVTVTKSSDG 299
             + GG H   +V   S G
Sbjct: 422 WGW-GGSHGTFSVDGHSSG 439



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 95/232 (40%), Gaps = 59/232 (25%)

Query: 11  NDCGEVF--TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTT 68
           +D G+ F   WG    G+LGL + D +   +P              C+ +   ++     
Sbjct: 92  SDSGKRFGAVWGNGDFGRLGLGNLDSQWSPVP--------------CSSFDREMLKGIAC 137

Query: 69  GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 128
           G  H+L L + G V+  G +  GQLG+ S +K+  + P  V+       +   AGY+H  
Sbjct: 138 GGAHTLFLTESGRVYATGLNNFGQLGI-SDEKRFSTEPVEVR--IPKEAMHISAGYNHSC 194

Query: 129 VLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGIN 188
           V+T+                                       GELY WG N  GQ+G+ 
Sbjct: 195 VVTAD--------------------------------------GELYMWGVNSNGQLGLG 216

Query: 189 -NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
             S   V  P +V+SL  + I   A G++HS  ++     ++++G G + +L
Sbjct: 217 KKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVADG-GEVFSWGDGRSGRL 267



 Score = 45.4 bits (106), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 87/225 (38%), Gaps = 73/225 (32%)

Query: 77  NDCGEVF--TWGGDTHGQLGLESADKKSQSIP------KRVKGLASVSVVQACAGYSHCL 128
           +D G+ F   WG    G+LGL + D +   +P      + +KG+A       C G +H L
Sbjct: 92  SDSGKRFGAVWGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIA-------CGG-AHTL 143

Query: 129 VLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGIN 188
            LT SG V                                      Y  G N +GQ+GI+
Sbjct: 144 FLTESGRV--------------------------------------YATGLNNFGQLGIS 165

Query: 189 NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKT 248
           +     T+P  VE  +      I+ G NHS V++     LY +G+ S  QL   K   K+
Sbjct: 166 DEKRFSTEP--VEVRIPKEAMHISAGYNHSCVVTAD-GELYMWGVNSNGQLGLGK---KS 219

Query: 249 PQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTV 293
            + +H P             + V    G+V+K+   G DHSI   
Sbjct: 220 AKAVHLP-------------TKVDSLDGIVIKRAALGSDHSIAVA 251


>gi|7524150|gb|AAD34642.2|AF154109_1 E3 ubiquitin-protein ligase [Mya arenaria]
          Length = 876

 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 67/100 (67%), Gaps = 1/100 (1%)

Query: 720 YGITEYE-ETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           +G+  Y  +TR  WF+  +FE++    L G + GLAIYN TI+++ FP  +Y+K++ +  
Sbjct: 587 FGMFTYNPDTRQFWFNPMSFENEGQFTLCGIVLGLAIYNSTIVDVHFPSVVYRKLVGKLG 646

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYL 818
             QDLK + PTLA++LQD+LDY   D+EDVF  TF+  YL
Sbjct: 647 TFQDLKGVDPTLARTLQDLLDYEGTDMEDVFMQTFQISYL 686



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 106/248 (42%), Gaps = 43/248 (17%)

Query: 864  QVLQKLNSLNNETLTSSISAG----GRTVSNIRT--------------PAPHGGRKVAYT 905
            ++L+  + + NE L  + + G    G+ V  +R               P+P     V + 
Sbjct: 390  KILEAESEMQNEMLGGAGAMGVEREGKEVRPVRDDPLAKELDISHADCPSPL----VPFE 445

Query: 906  AFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHA 965
             F    L     + +DY   +          F  N+ F+ +  +K   L MD R+QM   
Sbjct: 446  DFINDTLNETVSMEMDYKYKLDSEETPMKFSFF-NHSFVLNMPSKQMGLYMDNRVQMYKE 504

Query: 966  MNQTNFYLFLQTF-NPHTLNQYLEVEVSRDNIVEDTIREL---AQYTTNDFKKPLKVNDT 1021
               +     +QT  +      YL + VSR+ I++D +  L   A    +D +K L V   
Sbjct: 505  RRSS----VIQTIVHGMPTMPYLRIRVSRNRIIDDALVALEMVAMENPSDLRKQLFV--- 557

Query: 1022 SPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFED 1081
                     +F GE+  D GGV +EF  L+++EI +  +GMF    +TR  WF+  +FE+
Sbjct: 558  ---------EFDGEQGVDEGGVSKEFFQLIVEEIFNVDFGMFTYNPDTRQFWFNPMSFEN 608

Query: 1082 QNMYFLIG 1089
            +  + L G
Sbjct: 609  EGQFTLCG 616


>gi|298713261|emb|CBJ26957.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 530

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 142/332 (42%), Gaps = 38/332 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H + + + GE+ T G +  GQLG      K  S+P+ V G A   V +    YSH +
Sbjct: 116 GSEHLVVVTEEGELQTCGRNNSGQLG-HGEVGKGYSLPRPVAGFAGYRVTKVACSYSHTV 174

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V+T     W            T+GG+ +GQLG    D  S+S P  +     + V+    
Sbjct: 175 VVTDDDRTW------------TFGGNGYGQLG--HGDHSSRSAPAALACFQGLGVLSVAC 220

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITS--------------L 168
           G  H +V  +SG +  +  +N  G    +G +S      H   TS              L
Sbjct: 221 GVYHTVVSVASGGLY-SFGKNDHGQLGLEGGESRFTPVQHRACTSVVEQLACGYYHTVAL 279

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
           +  GE+  +G N+YGQ+G+ +  +T    Q V  L  L I  +ACG+ H+  L     R+
Sbjct: 280 SRAGEVVAFGRNDYGQLGLGHRESTWQGGQ-VPDLAGLRIIQVACGSYHTISLDDE-GRV 337

Query: 229 YAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGD 287
           Y FG  +  QL +  +     P  + G   +    + AG    +  +G  + +K      
Sbjct: 338 YPFGRNNHGQLGTGTREDACRPCFVEGLSQSFVCQVAAGFYHTLCLTGPPLERKA----G 393

Query: 288 HSIVTVTKSSDGVLSDDFRVLNPATQILDVNF 319
           H    V + S  + SD +R+LN  +Q  DV F
Sbjct: 394 HGSAFVVRDSKSLSSDLYRLLNNPSQS-DVTF 424



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 113/249 (45%), Gaps = 30/249 (12%)

Query: 10  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC---AGYSHCLVLTS 66
           L + GEV++ G ++ GQ G+   D   +++P+ V  L  V++ +     AG     ++ S
Sbjct: 59  LTNTGEVYSCGYNSEGQCGIGEID---ETVPEMVPSLTKVTLREPSFRPAG--RVSLVHS 113

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
             G  H + + + GE+ T G +  GQLG      K  S+P+ V G A   V +    YSH
Sbjct: 114 GNGSEHLVVVTEEGELQTCGRNNSGQLG-HGEVGKGYSLPRPVAGFAGYRVTKVACSYSH 172

Query: 127 CLVLT---------SSGVVTCTHKENGCGSDPSQ-------GVQSNLVQDSHTTITSLNS 170
            +V+T          +G     H ++   S P+        GV S      HT ++   +
Sbjct: 173 TVVVTDDDRTWTFGGNGYGQLGHGDHSSRSAPAALACFQGLGVLSVACGVYHTVVSV--A 230

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
            G LY++G N++GQ+G+    +  T  Q         +  +ACG  H+  LS++   + A
Sbjct: 231 SGGLYSFGKNDHGQLGLEGGESRFTPVQ--HRACTSVVEQLACGYYHTVALSRA-GEVVA 287

Query: 231 FGIGSAVQL 239
           FG     QL
Sbjct: 288 FGRNDYGQL 296



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 88/225 (39%), Gaps = 43/225 (19%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
           E++ +G +  G+LGL   D   +  P   +      +V   AG     VLT+T       
Sbjct: 12  ELYGFGQNACGELGL--GDTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNT------- 62

Query: 75  ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG 134
                GEV++ G ++ GQ G+   D   +++P+ V  L  V++ +             +G
Sbjct: 63  -----GEVYSCGYNSEGQCGIGEID---ETVPEMVPSLTKVTLREPS--------FRPAG 106

Query: 135 VVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTV 194
            V+  H  NG                 H  +  +   GEL T G N  GQ+G        
Sbjct: 107 RVSLVHSGNG---------------SEHLVV--VTEEGELQTCGRNNSGQLGHGEVGKGY 149

Query: 195 TKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           + P+ V       +  +AC  +H+ V++    R + FG     QL
Sbjct: 150 SLPRPVAGFAGYRVTKVACSYSHTVVVTDD-DRTWTFGGNGYGQL 193


>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
          Length = 1319

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 903  AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 956

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 957  ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 1008

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 1009 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 1068

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 1069 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 1124



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 91/218 (41%), Gaps = 48/218 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 23  GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 79

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 80  ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 128

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G    L LT SGVV                                    ++Y WG+N++
Sbjct: 129 GAQFSLALTKSGVVWTW---------------------------------QVYAWGDNDH 155

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
           GQ G N + T   KP  V+ L    I  +ACG++HS  
Sbjct: 156 GQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 192



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 750  TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 806

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 807  ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 866

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 867  SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 924

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 925  YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 984

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 985  GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 1042

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 1043 RRPRQVQGLQGKKVIAIATG 1062



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 81/191 (42%), Gaps = 44/191 (23%)

Query: 69  GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 128
           G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q         
Sbjct: 23  GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA------- 73

Query: 129 VLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGIN 188
                           CGS  +Q +             +L   G +++WG+ ++G++G  
Sbjct: 74  ----------------CGSRDAQTL-------------ALTDEGLVFSWGDGDFGKLGRG 104

Query: 189 NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS----VSRLYAFGIGS-AVQLDSPK 243
            S      PQ +E L    +  I CGA  S  L+KS      ++YA+G      Q +   
Sbjct: 105 GSEG-CNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTT 163

Query: 244 SVHKTPQLIHG 254
           +V++ P L+ G
Sbjct: 164 TVNRKPTLVQG 174



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 11/132 (8%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   G    L LT
Sbjct: 80  QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 137

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            +  +W         +V+ WG + HGQ G  +        P  V+GL    + +   G S
Sbjct: 138 KSGVVW-------TWQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVACGSS 188

Query: 126 HCLVLTSSGVVT 137
           H +  T+  V T
Sbjct: 189 HSVAWTTVDVAT 200


>gi|432104195|gb|ELK31017.1| RCC1 and BTB domain-containing protein 2 [Myotis davidii]
          Length = 526

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 98/231 (42%), Gaps = 57/231 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV       VV   A    C 
Sbjct: 136 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTSSLQNKVVVNIACGQMC- 192

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ D GEV+ WG + +GQLGL S+   +QS P R+  L  V V +   
Sbjct: 193 ----------SMAVVDNGEVYVWGYNGNGQLGLGSSG--NQSTPCRL-ALQGVRVQRVAC 239

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 240 GYAHTLVLTDE--------------------------------------GQVYAWGANSY 261

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N SN +   P  VE   +  I + AC + H+         +Y +G
Sbjct: 262 GQLGTGNKSNQSYPTPVVVEK--DRIIEIAACHSAHTSAAKTQGGHVYMWG 310



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 42/172 (24%)

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           +ND  EVF  G +  G LGL   D +S   P+R+  L+   +  AC  Y           
Sbjct: 39  VND--EVFVLGTNCCGCLGL--GDVQSTIEPRRLDSLSGKKI--ACLSY----------- 81

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                     GS P               I    + GE++TWG+N Y Q+G   +N  + 
Sbjct: 82  ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNHGLV 117

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK 247
                 +L N  +  +ACG+ HS VL+ S   ++A+G  ++ Q+ S  + ++
Sbjct: 118 PCHISTNLSNKHVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTANQ 168


>gi|367054632|ref|XP_003657694.1| hypothetical protein THITE_2123607 [Thielavia terrestris NRRL 8126]
 gi|347004960|gb|AEO71358.1| hypothetical protein THITE_2123607 [Thielavia terrestris NRRL 8126]
          Length = 904

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 33/215 (15%)

Query: 858  KLSFCLQVLQKLNSLNN-----ETLTSSISAGGRTVSN-IRTPAPHGGRKVAYTAFYMPD 911
            ++    QVL  L + NN       LT+  +A G    + +R P    G+ +A + FYM  
Sbjct: 698  QIKAAAQVLGFLFAANNMGHARRGLTNRPNAAGNKDRDFVRAP----GQILATSDFYM-T 752

Query: 912  LATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF 971
            L    D+  D+  W      G  R   C +PF+    AK  +LE D R QMEH      F
Sbjct: 753  LLDESDLVADFETWE----RGQGRFSFCQHPFLLSIGAKIRILEHDARRQMEHKARDAFF 808

Query: 972  YLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTN---DFKKPLKVNDTSPIYLAP 1028
               +       + Q+L + + R+ +VED+++ +++   +   + KK LK+N         
Sbjct: 809  DSIMTN---RAVQQFLVLNIRRECLVEDSLKAVSEVIGSGGEEIKKGLKIN--------- 856

Query: 1029 QVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMF 1063
               F+GEE  DAGG+R+E+ +LL++E+ +P +G F
Sbjct: 857  ---FQGEEGVDAGGLRKEWFLLLVREVFNPDHGTF 888


>gi|297838741|ref|XP_002887252.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333093|gb|EFH63511.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1027

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 117/264 (44%), Gaps = 42/264 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+ A+   G++++WG  TH    L   ++ S  IPKRV G      V     Y  C 
Sbjct: 347 GDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGALQGLYVS----YVAC- 401

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G WH+  +   G++FT+G  + G LG    D++S S+P+ VK L+ + V +   
Sbjct: 402 ------GPWHTAVVASSGQLFTFGDGSFGALG--HGDRRSTSVPREVKILSGLIVTKVAC 453

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H   L     VT    E   GS                      S G+++TWG+ E 
Sbjct: 454 GVWHTAALVE---VTNEASEAEVGS----------------------SRGQVFTWGDGEK 488

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS-KSVSRLYAFGIGSAVQLDS 241
           GQ+G  +++  +  P+ V SL N  I  +ACG  HS  +S  S   +Y  G  +  QL +
Sbjct: 489 GQLGHGDNDAQLL-PECVISLSNENICQVACG--HSLTVSLTSTGHVYTMGSTAYGQLGN 545

Query: 242 PKSVHKTPQLIHGPWIASPVAMTA 265
           P +    P  + G  + + V   A
Sbjct: 546 PTAKGNFPARVEGDIVEASVEEIA 569



 Score = 86.7 bits (213), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 110/234 (47%), Gaps = 20/234 (8%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WH+  +   G++FT+G  + G LG    D++S S+P+ VK L+ + V +   G  H  
Sbjct: 402 GPWHTAVVASSGQLFTFGDGSFGALG--HGDRRSTSVPREVKILSGLIVTKVACGVWHTA 459

Query: 63  VLTSTTGLWHSLALNDC-GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
            L   T       +    G+VFTWG    GQLG    D  +Q +P+ V  L++ ++ Q  
Sbjct: 460 ALVEVTNEASEAEVGSSRGQVFTWGDGEKGQLG--HGDNDAQLLPECVISLSNENICQVA 517

Query: 122 AGYSHCLVLTSSG-VVTCTHKENGCGSDPSQG------VQSNLVQDSHTTITS------- 167
            G+S  + LTS+G V T      G   +P+        V+ ++V+ S   I         
Sbjct: 518 CGHSLTVSLTSTGHVYTMGSTAYGQLGNPTAKGNFPARVEGDIVEASVEEIACGSYHVAV 577

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
           L S  E+YTWG    GQ+G + +     +P  V  L    +  I CG+N + V+
Sbjct: 578 LTSKSEIYTWGKGLNGQLG-HGTIENKREPAVVGFLKEKQVKAITCGSNFTAVI 630


>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
          Length = 4725

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 3989 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEVLQGHRVVDIACG---- 4042

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 4043 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4094

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 4095 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4154

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 4155 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4210



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 111/250 (44%), Gaps = 51/250 (20%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL   GEV++WG    G+LG    D      PK       +S      G  H  V+ 
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLG--HGDTLPLEEPK------VISAFSGKQGGKH--VVH 556

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+       
Sbjct: 557 IACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV----- 609

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CGS            D+ T   + N  G++++WG+ +YG++
Sbjct: 610 ------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGKL 638

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
           G   S+   T P+ +E L +L +  + CG+  S  L+K   ++Y++G G   +L      
Sbjct: 639 GRGGSDGCKT-PKLIEKLQDLDVIKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTEE 696

Query: 246 H-KTPQLIHG 254
           H + P+L+ G
Sbjct: 697 HVRYPKLLEG 706



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   ++IP  V GL  + V+    G     
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 612

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + V++   
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVIKVRC 665

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFAWS 778



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 94/223 (42%), Gaps = 53/223 (23%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+ AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3112

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 3113 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQV- 3157

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
                                   CGS  +Q +             +L   G +++WG+ +
Sbjct: 3158 ----------------------ACGSRDAQTL-------------ALTDEGLVFSWGDGD 3182

Query: 182  YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
            +G++G   S      PQ +E L    +  I CGA  S  L+KS
Sbjct: 3183 FGKLGRGGSEG-CNIPQNIERLNGQGVCQIECGAQFSLALTKS 3224



 Score = 71.6 bits (174), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  +Q   G      +T
Sbjct: 3836 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPIQLIGGEQTLFAVT 3892

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 3893 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3952

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
            +WG    G+LG    ++     P+ ++ L  + VV   AG +H   +T++G + T     
Sbjct: 3953 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4010

Query: 143  NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
             G    SD    ++  LV+    H  +      G+           +++WG+ +YG++G 
Sbjct: 4011 YGRLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4070

Query: 188  NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
              S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L      H 
Sbjct: 4071 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4128

Query: 247  KTPQLIHGPWIASPVAMTAG 266
            + P+ + G      +A+  G
Sbjct: 4129 RRPRQVQGLQGKKVIAIATG 4148



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3011

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  IP+++  L+S  V  V   +G  H   LT 
Sbjct: 3012 -----GKVYACGEATNGRLGL-GLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3065

Query: 133  SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
             G V       G G D   G               +++  ++D     SH+   +L S G
Sbjct: 3066 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3119

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            ELYTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 3120 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 62/134 (46%), Gaps = 14/134 (10%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3164

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 3165 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3213

Query: 123  GYSHCLVLTSSGVV 136
            G    L LT SGVV
Sbjct: 3214 GAQFSLALTKSGVV 3227



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)

Query: 57   GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
            G S  L+     GL  +  +    +VF WG +   QLG     K    +P   + L++++
Sbjct: 2939 GSSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2994

Query: 117  VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
            VVQ   G      +T  G V  C    NG        G+ P         S  V+   V 
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 160  DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  T+L   G++++WG  + G++G + S     KP+ +E+L    I  IACG++HS 
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3113

Query: 220  VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
             L+ S   LY +G+G   +L          PK V     H+  Q+  G   A  +A+T  
Sbjct: 3114 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3170

Query: 267  EDSLVSHSGGLVVKKIYSGG 286
            ++ LV   G     K+  GG
Sbjct: 3171 DEGLVFSWGDGDFGKLGRGG 3190



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 49/216 (22%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+          + + +   H LAL   GEV++WG    G+LG    D
Sbjct: 485 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG--HGD 532

Query: 100 KKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQ 159
                 PK       +S      G  H + +              CGS            
Sbjct: 533 TLPLEEPK------VISAFSGKQGGKHVVHIA-------------CGS------------ 561

Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
              T   ++ + GELYTWG   YG++G  +S      P  V  L  L +  +ACG+  + 
Sbjct: 562 ---TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 220 VLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
            L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 653


>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
 gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
          Length = 4933

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 106/234 (45%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A++  GE++TWG   +G+LG    D  +Q  PK V  L    V+Q   G     
Sbjct: 3059 GSSHSAAISSQGELYTWGLGEYGRLG--HGDNATQLKPKLVTALCGSRVIQVACGSRDA- 3115

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL + G VF+WG    G+LG      +  + P  ++ L+ + VVQ   
Sbjct: 3116 ---------QTLALTEDGAVFSWGDGDFGKLG--RGGSEGSATPHEIERLSGIGVVQIEC 3164

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-------PSQGVQSNLVQDSHTTITSLN-- 169
            G    L LT +G V    K +    G G D       P  G++   V   H  + +L+  
Sbjct: 3165 GAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRV--IHVAVGALHCL 3222

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G  N+     KP  V  L  + +  +ACG++HS  
Sbjct: 3223 AVTDAGQVYAWGDNDHGQQGSGNTFVN-KKPALVIGLDAVFVNRVACGSSHSMA 3275



 Score = 86.7 bits (213), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 29/236 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   G V TWG   +G+LG    D + Q  PK V+ L     +    G     
Sbjct: 4217 GSAHSAAITASGHVLTWGKGRYGRLG--HGDSEDQLRPKLVEALLGYRAIDIACG----- 4269

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L + D   V++WG   +G+LG   +D     +P +++ LA + V++   
Sbjct: 4270 -----SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD--GCKLPYKIESLAGLGVIKVEC 4322

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGS-----DPS-----QGVQSNLVQDSHTTITSL 168
            G    + LT SG V    K +    G GS      P      QG +   +        + 
Sbjct: 4323 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVAC 4382

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
            +  GE+YTWG+N+ GQ+G + + T + +P+ V +L    I  + CG+ H+  LS S
Sbjct: 4383 SDAGEVYTWGDNDEGQLG-DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4437



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 109/254 (42%), Gaps = 55/254 (21%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+LAL   G+VF+WG    G+LG    ++ +   P+ V+ L +  +     G S  
Sbjct: 3006 SGGKHALALTLDGKVFSWGEGEDGKLG--HGNRTTLDKPRLVEALRAKKIRDIACGSS-- 3061

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      HS A++  GE++TWG   +G+LG    D  +Q  PK V  L    V+Q  
Sbjct: 3062 ----------HSAAISSQGELYTWGLGEYGRLG--HGDNATQLKPKLVTALCGSRVIQV- 3108

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
                                   CGS  +Q +             +L   G +++WG+ +
Sbjct: 3109 ----------------------ACGSRDAQTL-------------ALTEDGAVFSWGDGD 3133

Query: 182  YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
            +G++G   S  + T P  +E L  + +  I CGA  S  L+++   ++ +G G   +L  
Sbjct: 3134 FGKLGRGGSEGSAT-PHEIERLSGIGVVQIECGAQFSLALTRA-GEVWTWGKGDYYRLGH 3191

Query: 242  PKSVH-KTPQLIHG 254
                H + PQ I G
Sbjct: 3192 GGDQHVRKPQPIAG 3205



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 117/308 (37%), Gaps = 78/308 (25%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+      ++ WG +  GQL GLE +  K+   P   + L+ +  VQ   G      +T
Sbjct: 4063 ALSWGGASTIYGWGHNHRGQLGGLEGSRIKT---PTPCEALSLLRPVQLAGGEQSLFAVT 4119

Query: 66   S------------------------------------------TTGLWHSLALNDCGEVF 83
                                                        +G  H LAL   GEV+
Sbjct: 4120 PDGKLFATGYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVY 4179

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
             WG    G+LG    ++ S   PK ++ L  +SV     G +H   +T+SG V    K  
Sbjct: 4180 AWGEGEDGKLG--HGNRLSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGR 4237

Query: 144  ----GCGSDPSQGVQSNLVQ---------------DSHTTITSLNSPGELYTWGNNEYGQ 184
                G G    Q ++  LV+               D+ T   + +    +++WG+ +YG+
Sbjct: 4238 YGRLGHGDSEDQ-LRPKLVEALLGYRAIDIACGSGDAQTLCITDDD--NVWSWGDGDYGK 4294

Query: 185  MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS-------RLYAFGIGSAV 237
            +G   S+     P ++ESL  L +  + CG+  S  L+KS +         +  G GS  
Sbjct: 4295 LGRGGSD-GCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4353

Query: 238  QLDSPKSV 245
             +  PK V
Sbjct: 4354 HVRRPKKV 4361



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 53/209 (25%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+VF  G  T+G+LGL      +  +P ++  L    VV+  A +S         G  H+
Sbjct: 2964 GKVFACGEGTNGRLGL--GVTHNVPLPHQLPVLHQY-VVKKVAVHS---------GGKHA 3011

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL   G+VF+WG    G+LG    ++ +   P+ V+ L +  +                
Sbjct: 3012 LALTLDGKVFSWGEGEDGKLG--HGNRTTLDKPRLVEALRAKKI---------------- 3053

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                   ++  CGS             SH+   +++S GELYTWG  EYG++G +  N T
Sbjct: 3054 -------RDIACGS-------------SHSA--AISSQGELYTWGLGEYGRLG-HGDNAT 3090

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLS 222
              KP+ V +L    +  +ACG+  +  L+
Sbjct: 3091 QLKPKLVTALCGSRVIQVACGSRDAQTLA 3119



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 107/239 (44%), Gaps = 33/239 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   G ++TWG   +G+LG   +D   Q +P  V  L    VV    G     
Sbjct: 700 GCSYSAAITLRGNLYTWGRGNYGRLGHGISD--DQCLPTMVMALKDHQVVDVALG----- 752

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G  H+L L + G V+ WG   +G+LG  S +   Q  P  ++ L  V  V A +
Sbjct: 753 -----SGDAHTLCLTNEGLVYAWGDGDYGKLGNASCNSSLQ--PLLIECLPRVQRVFAGS 805

Query: 123 GYSHCLV----LTSSGVVTCTHKE------NGCGSDPS--QGVQSNLVQDSHTTIT---S 167
            +S  L     L S G  +C   +       GC S P     +Q   + D    +T   +
Sbjct: 806 QFSLALTGEGQLYSWGKASCLGHQLVERNVQGC-SVPRLITSLQHKRIVDVAVGVTHCLA 864

Query: 168 LNSPGELYTWGNNEYGQMGINN--SNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
           L+S GE++ WG N+  Q+   +  S   + +P  V +L  LP + +AC A  S + ++S
Sbjct: 865 LSSAGEIFGWGRNDNQQICPASVCSEPLLRQPILV-TLPTLPASGMACTAVQSLIWTQS 922



 Score = 47.4 bits (111), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 94/233 (40%), Gaps = 63/233 (27%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS-VSVVQACAGYSHCLVL 64
           H LA+++    ++WG   + +LG    D  S+ +P +++ L   V  V     YS  + L
Sbjct: 652 HFLAVDNNFNAYSWGTGDNRRLG--HGDCHSRELPTKIESLVRRVKSVYCGCSYSAAITL 709

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC--A 122
                          G ++TWG   +G+LG   +D   Q +P  V  L    VV     +
Sbjct: 710 R--------------GNLYTWGRGNYGRLGHGISD--DQCLPTMVMALKDHQVVDVALGS 753

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H L LT+ G+V                                      Y WG+ +Y
Sbjct: 754 GDAHTLCLTNEGLV--------------------------------------YAWGDGDY 775

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
           G++G  + N+++ +P  +E L    +  +  G+  S  L+    +LY++G  S
Sbjct: 776 GKLGNASCNSSL-QPLLIECLPR--VQRVFAGSQFSLALTGE-GQLYSWGKAS 824



 Score = 44.3 bits (103), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 6/68 (8%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYS 59
            TG  H +A +D GEV+TWG +  GQLG    D    +I  P+ V  L    +V+   G +
Sbjct: 4374 TGSLHCVACSDAGEVYTWGDNDEGQLG----DGTVTAIQRPRLVAALQGKHIVKVTCGSA 4429

Query: 60   HCLVLTST 67
            H L L+++
Sbjct: 4430 HTLALSTS 4437


>gi|425772929|gb|EKV11309.1| Ubiquitin-protein ligase (Hul4), putative [Penicillium digitatum
            PHI26]
 gi|425782111|gb|EKV20040.1| Ubiquitin-protein ligase (Hul4), putative [Penicillium digitatum Pd1]
          Length = 1190

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 109/229 (47%), Gaps = 23/229 (10%)

Query: 864  QVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYF 923
            +V+    + N  + T       R++   +   P  G  +  + FY   L    D+  D+ 
Sbjct: 704  RVMSLFFTANISSATRKSDGTPRSLEMSKNAGPPQGHMLPISIFYN-TLLDYSDLVTDFE 762

Query: 924  RWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTL 983
             W +      ++   C YPF+    AK  ++E D R QME          F    N   +
Sbjct: 763  TWEAK----VSKFSFCQYPFLLSIWAKIHIMEHDARRQMEVKARDA---FFTSVLNHTAV 815

Query: 984  NQYLEVEVSRDNIVEDTIR---ELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDA 1040
            +QYL ++V R+ ++ED+++   E+      + KK L++            +F GEE  DA
Sbjct: 816  SQYLVLKVRRECLIEDSLKGVSEVVGTGQEEIKKGLRI------------EFSGEEGIDA 863

Query: 1041 GGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            GG+R+E+ +LL++E+ DP +G+F   ++++  +F+   FE    +FL+G
Sbjct: 864  GGLRKEWFLLLVREVFDPLHGLFVYDDDSQYCYFNPYCFESSEQFFLVG 912



 Score = 47.8 bits (112), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 18/105 (17%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP-------- 777
           ++++  +F+   FE     FL+G L GLAIYN TI+++  P   +KK+L           
Sbjct: 890 DDSQYCYFNPYCFESSEQFFLVGVLLGLAIYNSTILDVDLPPFAFKKLLSAAPHANGPQT 949

Query: 778 ---------ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                      L+DL +  P LAK L+ +L++ E ++ + F   F
Sbjct: 950 ATSMRSTFKCTLEDLAEYRPALAKGLRGLLEF-EGNVAETFCYDF 993


>gi|19113326|ref|NP_596534.1| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe
            972h-]
 gi|74582837|sp|O94275.1|MUG30_SCHPO RecName: Full=Probable E3 ubiquitin-protein ligase mug30; AltName:
            Full=Meiotically up-regulated gene 30 protein
 gi|3810851|emb|CAA21812.1| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe]
          Length = 807

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 79/139 (56%), Gaps = 17/139 (12%)

Query: 938  LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIV 997
             C YPF+    AK ++L++D R +ME    +  F   L   N   +  YL + V RD ++
Sbjct: 387  FCQYPFLLSMGAKISILQLDARRKMEIKAREAFFSSILSKMN---VEPYLMIRVRRDRLL 443

Query: 998  EDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILD 1057
            ED++R++      DF+K LKV            +F GEE  DAGG++RE+L+LL +++  
Sbjct: 444  EDSLRQIND-RNKDFRKALKV------------EFLGEEGIDAGGLKREWLLLLTRKVFS 490

Query: 1058 PKYGMFKEYEETRS-IWFS 1075
            P++G+F   EE+ + +WF+
Sbjct: 491  PEFGLFVNCEESSNYLWFN 509



 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 52/89 (58%), Gaps = 2/89 (2%)

Query: 726 EETRSIWFS-EDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLK 784
           E +  +WF+     ++ +   + G L G+AI+N   +++  P A YKK+L  P+   DL 
Sbjct: 501 ESSNYLWFNYSHRSKEIDYYHMSGILMGIAIHNSINLDVQMPRAFYKKLLQLPLSFNDLD 560

Query: 785 DLSPTLAKSLQDILDYREPDLEDVFGITF 813
           D  P+L + L+++L + E D+++ +G+ F
Sbjct: 561 DFQPSLYRGLKELLLF-EGDVKNTYGLNF 588


>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
           trifallax]
          Length = 546

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 147/331 (44%), Gaps = 49/331 (14%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  H +AL + G+VF++G +  GQLG    D+ S + PK+V+ L+   V      Y H 
Sbjct: 73  NGCEHVIALTNNGKVFSFGFNVKGQLG--HGDQTSINSPKQVEALSRKFVTAVGCSYYHT 130

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           +            +  D  E+++ G + +GQLGL + D K+   P  ++ L    +V   
Sbjct: 131 I-----------FSCADEMEIYSCGRNDYGQLGLGNLDDKNS--PTLIEALNGKRIVSIG 177

Query: 122 AGYSHCLVLTSSG-VVTCTHKENG----CGSDPS-------QGVQSNLVQDSHTTITSLN 169
            G  H +V +  G + +    ++G     GSD +       + ++S  +   +    ++N
Sbjct: 178 CGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVKNLKSTQIACGYYHTVAIN 237

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           + G+LY+WG N+ GQ+GI   +     P  V  L +  I  +ACG  H+  L  +  +L+
Sbjct: 238 N-GQLYSWGKNDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTLALGYA-GQLF 295

Query: 230 AFGIGSAVQL-DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
           +FG  S  QL D   +    P LI G               L+       V +I +G  H
Sbjct: 296 SFGRNSHGQLGDGTTNNSCKPLLIQG---------------LIDKK----VCQIAAGFYH 336

Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNF 319
           SIV         L +DF+ L    ++ DV F
Sbjct: 337 SIVLANPVIRNPLVEDFKQLLNNQELSDVTF 367



 Score = 79.7 bits (195), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 122/260 (46%), Gaps = 37/260 (14%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  H+L L DCG+V++ G +  G    +  +  SQ+          + +V+   G  + 
Sbjct: 8   AGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEKLRG-KNI 66

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + + ++ G  H +AL + G+VF++G +  GQLG    D+ S + PK+V+ L+   V    
Sbjct: 67  VKIFASNGCEHVIALTNNGKVFSFGFNVKGQLG--HGDQTSINSPKQVEALSRKFVTAVG 124

Query: 122 AGYSHCLVLTSSGVVTCTHKEN--GCG-SDPSQGVQSNL-VQDSHTTITSLNSP------ 171
             Y H        + +C  +     CG +D  Q    NL  ++S T I +LN        
Sbjct: 125 CSYYHT-------IFSCADEMEIYSCGRNDYGQLGLGNLDDKNSPTLIEALNGKRIVSIG 177

Query: 172 ------------GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                       GE++++G N+ GQ+GI  S+  ++ P+ V+   NL    IACG  H+ 
Sbjct: 178 CGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVK---NLKSTQIACGYYHTV 234

Query: 220 VLSKSVSRLYAFGIGSAVQL 239
            ++    +LY++G   + QL
Sbjct: 235 AINN--GQLYSWGKNDSGQL 252


>gi|348683616|gb|EGZ23431.1| hypothetical protein PHYSODRAFT_258036 [Phytophthora sojae]
          Length = 1271

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 113/252 (44%), Gaps = 42/252 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS--- 59
           G  HSLA+ D GE++TWG    G+LG    D + +++P++V  L   SV  A  G     
Sbjct: 570 GAQHSLAITDAGELYTWGSGEDGRLG--HGDMRDRAVPRKVMSLLRESVASASCGLGDNK 627

Query: 60  -----HCLV-------LTSTTGLWH-SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP 106
                H +V       +++    W+ + AL+  G +FTWG    GQ GL   DK  Q +P
Sbjct: 628 WRDTPHQIVGFPQGTRISNVVCGWNFTAALDRQGNIFTWGKTGEGQCGLGYVDK-DQVVP 686

Query: 107 KRVKGLASVSV----VQACAGYSHCLVLTSSG-VVTCTHKENG------------CGSDP 149
           + V+ L  V+     V    GY+H +VLT+SG + +    E G            C  D 
Sbjct: 687 RCVEKLREVAAGSAAVDVACGYTHTVVLTASGELYSWGLGEYGQLARVQLPSDALCAPDQ 746

Query: 150 SQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIA 209
              V         TT   +     ++ WG N YG  G+ ++     KP+R++   +    
Sbjct: 747 LTRVYCGAFHSIATTEKRV-----MFAWGLNSYGACGLGHT-ANKDKPERIDCFSSQTEL 800

Query: 210 LIACGANHSFVL 221
           ++ACG  ++  L
Sbjct: 801 VVACGHKYTIAL 812



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 103/238 (43%), Gaps = 18/238 (7%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L L   G+V+++G +   +    +    + S         S  +    A +   + + 
Sbjct: 508 HLLYLTSTGDVYSYGDNEDKKAAAVTIATNANSADNDYTRSISKELALEKALHRTTIAMI 567

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           S  G  HSLA+ D GE++TWG    G+LG    D + +++P++V  L   SV  A  G  
Sbjct: 568 SC-GAQHSLAITDAGELYTWGSGEDGRLG--HGDMRDRAVPRKVMSLLRESVASASCG-- 622

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
               L  +      H+  G      QG + + V        +L+  G ++TWG    GQ 
Sbjct: 623 ----LGDNKWRDTPHQIVGF----PQGTRISNVVCGWNFTAALDRQGNIFTWGKTGEGQC 674

Query: 186 GINNSNTTVTKPQRVESLVNLPIAL----IACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           G+   +     P+ VE L  +        +ACG  H+ VL+ S   LY++G+G   QL
Sbjct: 675 GLGYVDKDQVVPRCVEKLREVAAGSAAVDVACGYTHTVVLTAS-GELYSWGLGEYGQL 731



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 28/136 (20%)

Query: 106 PKRVKGLASVSVVQACAGYSHCLVLTSSG--------------VVTCTHKENGCGSDPSQ 151
           PK+V  L    +VQ   G  H L LTS+G               VT     N   +D ++
Sbjct: 488 PKQVSLLNGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKAAAVTIATNANSADNDYTR 547

Query: 152 GVQSNLVQDS---HTTIT----------SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQ 198
            +   L  +     TTI           ++   GELYTWG+ E G++G  +       P+
Sbjct: 548 SISKELALEKALHRTTIAMISCGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAV-PR 606

Query: 199 RVESLVNLPIALIACG 214
           +V SL+   +A  +CG
Sbjct: 607 KVMSLLRESVASASCG 622


>gi|323450026|gb|EGB05910.1| hypothetical protein AURANDRAFT_66097 [Aureococcus anophagefferens]
          Length = 1340

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 114/248 (45%), Gaps = 39/248 (15%)

Query: 5   WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
           +H+LAL   GEV+++G    GQLG    D++S + P+RV  LA               V+
Sbjct: 139 FHTLALTASGEVYSFGHGGCGQLG--HGDQESSATPRRVDALAGA------------FVV 184

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
             + G  HSLAL D G  + +G    G+ GL   D++S+S+P+RV G+    V    AG 
Sbjct: 185 AVSCGQQHSLALTDRGAPYAFGSGFGGKTGL--GDQRSRSLPRRVAGIPE-PVAVLTAGA 241

Query: 125 SHCLVLTSSGVV----TCTH-----KENGCGSDPSQ--GVQSNLVQDSHTTITSL--NSP 171
            H L  T+SG V    +  H      E G    P +   +   +VQ S     SL  ++ 
Sbjct: 242 HHSLAATTSGAVYAFGSNVHLQLGLPERGDAYAPRRVDALDGRVVQLSGGEHHSLAVDAA 301

Query: 172 GELYTWGNNE--------YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
           G  Y+WG  E         G    + S     +P+RVE L  +     A GA HS VLS 
Sbjct: 302 GACYSWGAGEGRERTSVMVGGFLGHRSLDDAARPRRVEGLAGVRAVDCAAGALHSLVLS- 360

Query: 224 SVSRLYAF 231
           +   +Y+F
Sbjct: 361 AAGDVYSF 368



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 77/182 (42%), Gaps = 53/182 (29%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL D G  + +G    G+ GL   D++S+S+P+RV G+    V    AG  H L
Sbjct: 189 GQQHSLALTDRGAPYAFGSGFGGKTGL--GDQRSRSLPRRVAGIPE-PVAVLTAGAHHSL 245

Query: 63  VLTSTTGLW---------------------------------------HSLALNDCGEVF 83
             T++  ++                                       HSLA++  G  +
Sbjct: 246 AATTSGAVYAFGSNVHLQLGLPERGDAYAPRRVDALDGRVVQLSGGEHHSLAVDAAGACY 305

Query: 84  TWGGD---------THGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG 134
           +WG             G LG  S D  ++  P+RV+GLA V  V   AG  H LVL+++G
Sbjct: 306 SWGAGEGRERTSVMVGGFLGHRSLDDAAR--PRRVEGLAGVRAVDCAAGALHSLVLSAAG 363

Query: 135 VV 136
            V
Sbjct: 364 DV 365



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 20/185 (10%)

Query: 64  LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG 123
           ++  T  +H+LAL   GEV+++G    GQLG    D++S + P+RV  LA   VV    G
Sbjct: 132 ISVATHSFHTLALTASGEVYSFGHGGCGQLG--HGDQESSATPRRVDALAGAFVVAVSCG 189

Query: 124 YSHCLVLTSSGVV----TCTHKENGCGSDPSQGVQSN----------LVQDSHTTITSLN 169
             H L LT  G      +    + G G   S+ +             L   +H ++ +  
Sbjct: 190 QQHSLALTDRGAPYAFGSGFGGKTGLGDQRSRSLPRRVAGIPEPVAVLTAGAHHSLAATT 249

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           S G +Y +G+N + Q+G+         P+RV++L    + L   G  H  +   +    Y
Sbjct: 250 S-GAVYAFGSNVHLQLGLPERGDAYA-PRRVDALDGRVVQL--SGGEHHSLAVDAAGACY 305

Query: 230 AFGIG 234
           ++G G
Sbjct: 306 SWGAG 310



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 34/182 (18%)

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQ---------------------GVQSNLVQ 159
            AG SH +V+   G +        CG+DP++                     G++   V 
Sbjct: 82  AAGTSHTVVVAHDGTL------RACGTDPTRRGFLGQGPVFRVHRPARVPAGGLRFISVA 135

Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                  +L + GE+Y++G+   GQ+G  +  ++ T P+RV++L    +  ++CG  HS 
Sbjct: 136 THSFHTLALTASGEVYSFGHGGCGQLGHGDQESSAT-PRRVDALAGAFVVAVSCGQQHSL 194

Query: 220 VLS-KSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVA-MTAG-EDSLVSHSGG 276
            L+ +     +  G G    L   +S    P+ + G  I  PVA +TAG   SL + + G
Sbjct: 195 ALTDRGAPYAFGSGFGGKTGLGDQRS-RSLPRRVAG--IPEPVAVLTAGAHHSLAATTSG 251

Query: 277 LV 278
            V
Sbjct: 252 AV 253


>gi|301100760|ref|XP_002899469.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262103777|gb|EEY61829.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 995

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 123/280 (43%), Gaps = 66/280 (23%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H++AL   GE+F+WG + HG LG   A+  +Q    R   + ++S  QA A         
Sbjct: 195 HAMALAKAGELFSWGDNAHGALGF-PAENAAQVARNRATVVGALSNYQAVA--------- 244

Query: 66  STTGLWHSLALNDC-----GEVFTWGGDTHGQLGL------ESADKKSQSIP-------- 106
           +  G  HS+A+ D      G VF WG ++HGQLG+      + AD  ++  P        
Sbjct: 245 AAVGGHHSIAVCDHVAGHDGVVFCWGSNSHGQLGIIPSSFNKPADAPAKPSPTTFPRSAV 304

Query: 107 -KRVKGLASVSVVQACAGYSHCLVLTSSGVV---TCTHKEN-GCGSDPSQ---------- 151
             +V  L SVSV Q   G  H L LTS G V    C+     G G D  +          
Sbjct: 305 MHQVAALRSVSVRQVACGVLHSLALTSDGQVFSWGCSDGGRLGQGQDTKRSSDIREPALV 364

Query: 152 -GVQSNLV--------------QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT- 195
            G+ +NLV                  + +TS    G +YTWG   YGQ+G+  +      
Sbjct: 365 NGILANLVTLTIACGAWQSACIAAEASQVTS--GAGRVYTWGTGVYGQLGVGKAQVAYEP 422

Query: 196 KPQRV---ESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           +P RV   E    +    +ACG +H+ VL+   +R++ +G
Sbjct: 423 QPVRVPPRELDDEVFATRLACGTHHTAVLTVD-NRIFTWG 461



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 63/137 (45%), Gaps = 14/137 (10%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLAS--VSVVQACAGY 58
           G+ HSLAL   G+VF+WG    G+LG     K+S  I  P  V G+ +  V++  AC  +
Sbjct: 322 GVLHSLALTSDGQVFSWGCSDGGRLGQGQDTKRSSDIREPALVNGILANLVTLTIACGAW 381

Query: 59  -SHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLA---S 114
            S C+   +      S   +  G V+TWG   +GQLG+  A    +  P RV        
Sbjct: 382 QSACIAAEA------SQVTSGAGRVYTWGTGVYGQLGVGKAQVAYEPQPVRVPPRELDDE 435

Query: 115 VSVVQACAGYSHCLVLT 131
           V   +   G  H  VLT
Sbjct: 436 VFATRLACGTHHTAVLT 452


>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
 gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
          Length = 985

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 120/241 (49%), Gaps = 40/241 (16%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL D G V+ WG +  GQLG       S+ IP +V+GL+ + V  +C          
Sbjct: 286 HSLALKDDGTVWAWGDNESGQLG--DGTTNSKYIPSQVQGLSGI-VSISC---------- 332

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G ++S+AL + G V+ WG +T GQLG  +   ++ ++P  V GL  V +  AC G +
Sbjct: 333 ---GFYYSMALKNDGTVWVWGDNTSGQLGDGTTTDRNTAVP--VSGLDGV-IAIAC-GVN 385

Query: 126 HCLVLTSSGVVTC----THKENGCGSDPSQ----------GVQSNLVQDSHTTITSLNSP 171
           H + L + G V         + G G+  S+          G+ +     SH+   +L   
Sbjct: 386 HSMALRNDGTVWTWGFNAFGQLGDGTKVSKNTAVPISGLDGIIAITCGTSHS--MALKDD 443

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G ++ WG+N+YGQ+G N +  + T P +V +L    I  I CG + SF L K    ++A+
Sbjct: 444 GTVWAWGDNQYGQLG-NGTFISNTTPSQVSNLSG--IKSIFCGYSTSFAL-KPDGTVWAW 499

Query: 232 G 232
           G
Sbjct: 500 G 500



 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 44/292 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G ++S+AL + G V+ WG +T GQLG  +   ++ ++P  V GL  V +  AC       
Sbjct: 333 GFYYSMALKNDGTVWVWGDNTSGQLGDGTTTDRNTAVP--VSGLDGV-IAIAC------- 382

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G+ HS+AL + G V+TWG +  GQLG  +   K+ ++P  + GL  +  +    
Sbjct: 383 ------GVNHSMALRNDGTVWTWGFNAFGQLGDGTKVSKNTAVP--ISGLDGI--IAITC 432

Query: 123 GYSHCLVLTSSGVVTC----THKENGCGS-----DPSQ-----GVQSNLVQDSHTTITSL 168
           G SH + L   G V       + + G G+      PSQ     G++S      ++T  +L
Sbjct: 433 GTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTPSQVSNLSGIKSIFC--GYSTSFAL 490

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
              G ++ WGNNEYG++G     T V  P   E+L    I  I+ G++H   L K+   +
Sbjct: 491 KPDGTVWAWGNNEYGELG-KGFTTRVIYP--TETLNIGDIKAISIGSSHCLAL-KNDGTV 546

Query: 229 YAFGIGSAVQL-DSPKSVHKTPQLIHGPWIASPVAMTA-GEDSLVSHSGGLV 278
           +A+G     QL D   ++   P  + G  I+   A++A G  SL   S G V
Sbjct: 547 WAWGDNRYGQLGDGTTTIKSLPVQVSG--ISGITAISAGGSHSLALKSDGTV 596



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 40/244 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G ++S+AL   G V+TWG + +GQLG       ++  P +V+ L+ +  +          
Sbjct: 233 GKYYSMALKSDGTVWTWGENDYGQLG--DGTTATRLSPVQVQNLSGIIAI---------- 280

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
               ++G  HSLAL D G V+ WG +  GQLG       S+ IP +V+GL+   +V    
Sbjct: 281 ----SSGNSHSLALKDDGTVWAWGDNESGQLG--DGTTNSKYIPSQVQGLS--GIVSISC 332

Query: 123 GYSHCLVLTSSGVV------TCTHKENGCGSDPS--------QGVQSNLVQDSHTTITSL 168
           G+ + + L + G V      T     +G  +D +         GV +     +H+   +L
Sbjct: 333 GFYYSMALKNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGLDGVIAIACGVNHS--MAL 390

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
            + G ++TWG N +GQ+G     T V+K   V       I  I CG +HS  L K    +
Sbjct: 391 RNDGTVWTWGFNAFGQLG---DGTKVSKNTAVPISGLDGIIAITCGTSHSMAL-KDDGTV 446

Query: 229 YAFG 232
           +A+G
Sbjct: 447 WAWG 450



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 115/255 (45%), Gaps = 38/255 (14%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LAL   G V+  G + +GQLG  +    +  IP  V+GL  VS + A           
Sbjct: 186 HTLALESDGTVWACGENDYGQLGNNNTIDINSPIP--VEGLNKVSSISA----------- 232

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G ++S+AL   G V+TWG + +GQLG       ++  P +V+ L+   ++   +G S
Sbjct: 233 ---GKYYSMALKSDGTVWTWGENDYGQLG--DGTTATRLSPVQVQNLS--GIIAISSGNS 285

Query: 126 HCLVLTSSGVV-TCTHKENGCGSD--------PSQGVQ--SNLVQDSHTTITS--LNSPG 172
           H L L   G V      E+G   D        PSQ VQ  S +V  S     S  L + G
Sbjct: 286 HSLALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQ-VQGLSGIVSISCGFYYSMALKNDG 344

Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
            ++ WG+N  GQ+G     TT  +   V       +  IACG NHS  L ++   ++ +G
Sbjct: 345 TVWVWGDNTSGQLG---DGTTTDRNTAVPVSGLDGVIAIACGVNHSMAL-RNDGTVWTWG 400

Query: 233 IGSAVQLDSPKSVHK 247
             +  QL     V K
Sbjct: 401 FNAFGQLGDGTKVSK 415



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 51/232 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL   G V+ WG +  GQLG     K+ ++ P +V  L+ ++V+  C   S  L   
Sbjct: 586 HSLALKSDGTVWAWGQNNVGQLG--DGTKEDRNTPVQVSELSGITVISNCIYRSFALKND 643

Query: 66  STTGLW--------------------------------HSLALNDCGEVFTWGGDTHGQL 93
            T  +W                                H+LAL + G V+ WG +  GQ 
Sbjct: 644 GTVWVWGSDSYNLPLEKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNFGQF 703

Query: 94  GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV----------TCTHKEN 143
           G       + +IP +V GL+ V  +    G +  + L S G V          + +  E 
Sbjct: 704 G--DGTTTTTNIPVQVSGLSGVKAI--AVGGNRSIALKSDGTVWQWGRILVSVSPSTVET 759

Query: 144 GCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
              +    G+ S +V  S+    +L + G+++TWG N+YGQ+G   +   VT
Sbjct: 760 WTTARQVDGL-SEIVSISNNV--ALKNDGKVFTWGANDYGQLGDGTTTARVT 808



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 84/196 (42%), Gaps = 32/196 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL D G V+ WG + +GQLG  +    S + P +V  L+ +  +    GYS   
Sbjct: 433 GTSHSMALKDDGTVWAWGDNQYGQLG--NGTFISNTTPSQVSNLSGIKSI--FCGYST-- 486

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S AL   G V+ WG + +G+LG     +     P     +  +  +    
Sbjct: 487 ----------SFALKPDGTVWAWGNNEYGELGKGFTTR--VIYPTETLNIGDIKAI--SI 532

Query: 123 GYSHCLVLTSSGVV-TCTHKENGCGSDPSQGVQSNLVQDSH----TTITS-------LNS 170
           G SHCL L + G V        G   D +  ++S  VQ S     T I++       L S
Sbjct: 533 GSSHCLALKNDGTVWAWGDNRYGQLGDGTTTIKSLPVQVSGISGITAISAGGSHSLALKS 592

Query: 171 PGELYTWGNNEYGQMG 186
            G ++ WG N  GQ+G
Sbjct: 593 DGTVWAWGQNNVGQLG 608



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 37/172 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+LAL + G V+ WG +  GQ G       + +IP +V GL+ V  +      S  L
Sbjct: 679 GTYHNLALKNDGTVWAWGKNNFGQFG--DGTTTTTNIPVQVSGLSGVKAIAVGGNRSIAL 736

Query: 63  VLTSTTGLW-------------------------------HSLALNDCGEVFTWGGDTHG 91
               T   W                               +++AL + G+VFTWG + +G
Sbjct: 737 KSDGTVWQWGRILVSVSPSTVETWTTARQVDGLSEIVSISNNVALKNDGKVFTWGANDYG 796

Query: 92  QLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
           QLG  +   +    P  V GL  V+ V +    +  +VL + G +    K N
Sbjct: 797 QLGDGTTTARVTVAP--VSGLEGVAGVASSD--TTSMVLMNDGTIRAWGKNN 844


>gi|367035126|ref|XP_003666845.1| hypothetical protein MYCTH_2311917 [Myceliophthora thermophila ATCC
            42464]
 gi|347014118|gb|AEO61600.1| hypothetical protein MYCTH_2311917 [Myceliophthora thermophila ATCC
            42464]
          Length = 1220

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 104/202 (51%), Gaps = 27/202 (13%)

Query: 891  IRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAK 950
            +R+P    G+ +A + FY+  L    D+  D+  W         R   C +PF+    AK
Sbjct: 738  VRSP----GQILATSDFYV-TLLDDSDLVGDFEAW----ERKLERFSFCQHPFLLSIGAK 788

Query: 951  TTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTN 1010
              +LE + + QME   N+     F        + Q+L + + R+ +V+D+++ +++   +
Sbjct: 789  IQILEYEAKRQME---NKARDAFFDSILTNRVVQQFLVLNIRRECLVDDSLKAVSEVIGS 845

Query: 1011 ---DFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYE 1067
               D KK L++N            F+GEE  DAGG+R+E+ +LL++E+ +P +GMF   E
Sbjct: 846  GGEDIKKGLRIN------------FKGEEGVDAGGLRKEWFLLLVREVFNPDHGMFLYDE 893

Query: 1068 ETRSIWFSEDTFEDQNMYFLIG 1089
            ++   +F+ ++ E    +FL+G
Sbjct: 894  DSNYCYFNPNSLESSEQFFLVG 915



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 16/103 (15%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL----------- 774
           E++   +F+ ++ E     FL+G + GLAIYN TI+++  P   ++K+L           
Sbjct: 893 EDSNYCYFNPNSLESSEQFFLVGVVFGLAIYNSTILDVALPPFAFRKLLAAAPPPSVPTA 952

Query: 775 --DEPI--LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
              +P+   L DL +  P LA  L+ +L++ E D+E  FG+ F
Sbjct: 953 QPRQPMTYTLDDLAEYRPRLAHGLRQLLEF-EGDVESTFGLDF 994


>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
 gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
          Length = 1064

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 109/228 (47%), Gaps = 21/228 (9%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WHS      G++FT+G  T G LG    D++S + PK V+ L+    ++   G  H  
Sbjct: 390 GSWHSALTMSSGKLFTFGDGTFGSLG--HGDRESVAYPKEVEALSGFRAMKVACGVWHSA 447

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +   +G   + A++   ++FTWG     +LG    DK+++ +P  V+ L   +  Q   
Sbjct: 448 AIVEISGQASTNAMSR--KLFTWGDGDKNRLG--HGDKEAKLVPTCVQALVDHNFHQVAC 503

Query: 123 GYSHCLVLTSSG-VVTCTHKENG-CGSDPSQGVQSNLVQDS------------HTTITSL 168
           G+S  + L +SG V T     NG  G+  + G Q  +VQD                + +L
Sbjct: 504 GHSMTVALATSGHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAAL 563

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN 216
            S  E+YTWG    G++G + S     KP  V++L +  +  I+CG+N
Sbjct: 564 TSRSEVYTWGMGANGRLG-HGSVEDKKKPTLVDALKDRHVKSISCGSN 610



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 41/262 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+  +   G+++ WG  ++    L      S  +PKRV G   +  +Q         
Sbjct: 335 GEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSG--PLEGLQ--------- 383

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC 121
           VL+   G WHS      G++FT+G  T G LG    D++S + PK V+ L+    ++ AC
Sbjct: 384 VLSVACGSWHSALTMSSGKLFTFGDGTFGSLG--HGDRESVAYPKEVEALSGFRAMKVAC 441

Query: 122 AGYSHCLVLTSSGVVTCTH-----------KENGCGSDPSQG----------VQSNLVQD 160
             +    ++  SG  +               +N  G    +           V  N  Q 
Sbjct: 442 GVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQV 501

Query: 161 S--HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVE-SLVNLPIALIACGANH 217
           +  H+   +L + G ++T G++  GQ+G  N      +P  V+  L N  +  I+CG+NH
Sbjct: 502 ACGHSMTVALATSGHVFTMGSSNNGQLG--NPKADGKQPCMVQDKLGNELVEEISCGSNH 559

Query: 218 SFVLSKSVSRLYAFGIGSAVQL 239
              L+ S S +Y +G+G+  +L
Sbjct: 560 VAALT-SRSEVYTWGMGANGRL 580



 Score = 46.2 bits (108), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 5/87 (5%)

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           GE++TWG    G++G + ++T + +P+ VESL    +  IACG  H+ V++ S   LY +
Sbjct: 294 GEVFTWGEELGGRLG-HGTDTDICRPKLVESLAVSNVEYIACGEFHTCVVTAS-GDLYDW 351

Query: 232 GIGS--AVQLDSPKSV-HKTPQLIHGP 255
           G GS  A  L     V H  P+ + GP
Sbjct: 352 GDGSYNAGLLGHGTGVSHWLPKRVSGP 378


>gi|225563069|gb|EEH11348.1| ubiquitin-protein ligase E3 [Ajellomyces capsulatus G186AR]
          Length = 1207

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 110/234 (47%), Gaps = 33/234 (14%)

Query: 863  LQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRK----VAYTAFYMPDLATVCDI 918
            + +L   NS+ +         GG  +S       H G+     +  +AFY   L    D+
Sbjct: 723  MALLFSANSVTHNRRRDGPRPGGEEISR------HDGQGRRHLIPISAFYN-TLLDYSDL 775

Query: 919  RIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTF 978
              D+  W  GR NG      C Y F     AK  +LE D R QME    +     F    
Sbjct: 776  IADFEAW-EGR-NGQFS--FCQYSFFLSIWAKIRILEHDARRQMEEKAREA---FFDSIL 828

Query: 979  NPHTLNQYLEVEVSRDNIVEDTIRELAQYT---TNDFKKPLKVNDTSPIYLAPQVKFRGE 1035
                ++QYL ++V R+ + ED++R +++       + KK L++            +F GE
Sbjct: 829  GRRGVSQYLVLKVRRECLAEDSLRSVSEVVGTGQGEIKKGLRI------------EFLGE 876

Query: 1036 EAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            E  DAGG+R+E+ +LL++EI DP +G+F   E+++  +F+   FE    +FL+G
Sbjct: 877  EGVDAGGLRKEWFLLLVREIFDPLHGLFVYDEQSQYCYFNPYCFESSEQFFLVG 930



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 21/124 (16%)

Query: 726  EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL------DEPIL 779
            E+++  +F+   FE     FL+G L GLAIYN TI+++  P   ++K+L      + P L
Sbjct: 908  EQSQYCYFNPYCFESSEQFFLVGVLLGLAIYNSTILDIALPPFAFRKLLACAPPNNVPAL 967

Query: 780  ----------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFERLI 829
                      L DL +  P LAK L+D+L+Y E D+++ F + F    ++  + Y ERL+
Sbjct: 968  STPQQSFKCTLDDLAEYQPALAKGLRDLLNY-EGDVQETFCLDF----VVQIERYGERLV 1022

Query: 830  LIFK 833
            +  +
Sbjct: 1023 IPLR 1026


>gi|351711669|gb|EHB14588.1| Putative E3 ubiquitin-protein ligase HERC6 [Heterocephalus glaber]
          Length = 895

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/91 (52%), Positives = 64/91 (70%), Gaps = 4/91 (4%)

Query: 720 YGITEY-EETRSIWFSED-TFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
           YG+  Y EE   +WF  +  FE  N  FL G LCGL+++N  I+N+PFPLALYKK+LD+ 
Sbjct: 608 YGMFMYPEEGSYMWFPVNPKFE--NRYFLFGMLCGLSLFNSNIVNIPFPLALYKKLLDQK 665

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDV 808
             L+DLK+LSP L KSLQ+IL+    DLE++
Sbjct: 666 PSLEDLKELSPVLGKSLQEILNDEADDLEEL 696



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 18/151 (11%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVED 999
            ++PF+ + + K  LL+ D  I+M+ +  + N ++ ++       +  L + + R ++VED
Sbjct: 503  HFPFVCNLQCKIKLLQADSSIKMQRSAAKVNLHIMVEG---KVESPTLMLRIRRSHLVED 559

Query: 1000 TIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPK 1059
             + +L+Q    D  K L V            +F  E   ++GGV  EF   + +E+  PK
Sbjct: 560  ALHQLSQVEDTDLWKALVV------------EFIKEIRPESGGVTSEFFHCIFEEMTQPK 607

Query: 1060 YGMFKEYEETRSIWFSED-TFEDQNMYFLIG 1089
            YGMF   EE   +WF  +  FE  N YFL G
Sbjct: 608  YGMFMYPEEGSYMWFPVNPKFE--NRYFLFG 636



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 86/220 (39%), Gaps = 53/220 (24%)

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
           +AL+  G V++WGG+  GQLGL     K+   P  V+   +  V     G +H  +LT  
Sbjct: 1   MALSMSGNVYSWGGNDCGQLGL--GHTKNTDSPSLVEVPDNQKVECVACGGAHTALLTQD 58

Query: 134 GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
           G+                                      ++T+G  ++GQ+G +NS   
Sbjct: 59  GL--------------------------------------MFTFGAGKHGQLG-HNSTKN 79

Query: 194 VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIH 253
             +P  V  L    +  IACG  H+   +  +    +FG G   QL +           H
Sbjct: 80  ELRPCLVTELSGNRVTQIACGRWHTLAYASDLDVFSSFGFGEEGQLGNGGK--------H 131

Query: 254 GPWIASPVAMTAGEDSLVS--HSGGLVVKKIYSGGDHSIV 291
              I  P+   + ED      HSG  ++  I +GG+ SI+
Sbjct: 132 NQLIPLPMKSPSNEDLQFESHHSGKELI--IIAGGNQSIL 169



 Score = 50.1 bits (118), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 55/125 (44%), Gaps = 16/125 (12%)

Query: 8   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTST 67
           +AL+  G V++WGG+  GQLGL     K+   P  V+   +  V     G +H  +LT  
Sbjct: 1   MALSMSGNVYSWGGNDCGQLGL--GHTKNTDSPSLVEVPDNQKVECVACGGAHTALLTQD 58

Query: 68  TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 127
                       G +FT+G   HGQLG  S   K++  P  V  L+   V Q   G  H 
Sbjct: 59  ------------GLMFTFGAGKHGQLGHNST--KNELRPCLVTELSGNRVTQIACGRWHT 104

Query: 128 LVLTS 132
           L   S
Sbjct: 105 LAYAS 109



 Score = 43.1 bits (100), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 10/129 (7%)

Query: 401 CVCPTVLGDCVPKSWLYLETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYD 460
           C  P + G+        +  +F S  C+ GSFL     E  +  + +  VD+Q+ +D + 
Sbjct: 271 CRAPRLWGESSSPPPREIRDIFSSAACLTGSFLM----ERGTGETISIDVDLQMARDTFK 326

Query: 461 TIARIERESVRSLVSNLAILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEI 520
            +  +E E + S++    +    ++L+++L    P  EAL +FL LP      +      
Sbjct: 327 KL--MEEEWISSMI----VTCLESNLLRALPFLSPHQEALSIFLLLPECPAMHDSNNWRS 380

Query: 521 LHMPFAGAL 529
           L +PFA A+
Sbjct: 381 LVIPFAQAV 389



 Score = 39.7 bits (91), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 50/107 (46%), Gaps = 19/107 (17%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHCLVL 64
           H+  L   G +FT+G   HGQLG  S   K++  P  V  L+   V Q AC         
Sbjct: 51  HTALLTQDGLMFTFGAGKHGQLGHNST--KNELRPCLVTELSGNRVTQIAC--------- 99

Query: 65  TSTTGLWHSLALNDCGEVF-TWGGDTHGQLGLESADKKSQSIPKRVK 110
               G WH+LA     +VF ++G    GQLG  +  K +Q IP  +K
Sbjct: 100 ----GRWHTLAYASDLDVFSSFGFGEEGQLG--NGGKHNQLIPLPMK 140


>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 441

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 127/263 (48%), Gaps = 35/263 (13%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LA+   GEV +WG + +GQLGL + +     +P+ ++    +SV    AG        
Sbjct: 130 HCLAVTMAGEVLSWGRNQNGQLGLGTTE--DSLLPQTIQAFEGISVKMIAAGAE------ 181

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 H+ A+ + G+++ WG   +G LGL   D+  + +P++V  +    +V    G+ 
Sbjct: 182 ------HTAAVTEDGDIYGWGWGRYGNLGL--GDRNDRFVPEKVSSVEGDKMVLVACGWR 233

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV-------QDSHTTITS--------LNS 170
           H + ++SSG +  T+  +  G       + +LV       +DS T+  S        L S
Sbjct: 234 HTITVSSSGSLY-TYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTS 292

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
            G+LY WG N++GQ+G  + N     P +V       +A +ACG  H+   ++    ++A
Sbjct: 293 DGKLYGWGWNKFGQVGAGD-NADHCSPAQVNFPEEQKVAQVACGWRHTLAFTEK-KNVFA 350

Query: 231 FGIGSAVQLDSPKSVHK-TPQLI 252
           +G G++ QL   + V + TP +I
Sbjct: 351 WGRGTSGQLGHGEIVDRNTPVII 373



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 107/252 (42%), Gaps = 31/252 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS+AL     + TWG    GQLG    D + + +P  + G  +  +     G  H 
Sbjct: 21  AGASHSVALLAGNVLCTWGRGEDGQLG--HGDAEDRLVPTVISGFDAPGITSVICGADHT 78

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +            D  +V++WG    G+LG    +      P+ VK L  + + Q  
Sbjct: 79  TAYS-----------EDEHQVYSWGWGDFGRLG--HGNSTDVFTPQPVKALQGIKIKQLA 125

Query: 122 AGYSHCLVLTSSG-VVTCTHKEN---GCGSDPS----------QGVQSNLVQDSHTTITS 167
            G SHCL +T +G V++    +N   G G+             +G+   ++        +
Sbjct: 126 CGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAA 185

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           +   G++Y WG   YG +G+ + N     P++V S+    + L+ACG  H+  +S S S 
Sbjct: 186 VTEDGDIYGWGWGRYGNLGLGDRNDRFV-PEKVSSVEGDKMVLVACGWRHTITVSSSGS- 243

Query: 228 LYAFGIGSAVQL 239
           LY +G     QL
Sbjct: 244 LYTYGWSKYGQL 255


>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
 gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
          Length = 1935

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 131/277 (47%), Gaps = 53/277 (19%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV---KGLASVSVVQACAGYS 59
            G  H   + D GE++TWG +  GQLG      K+ S+PKRV   +G + + +V+ C G  
Sbjct: 1130 GWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVE-CGGE- 1187

Query: 60   HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ 119
                        H++A++    V++WG D  GQLG       +QS PK ++ L    +  
Sbjct: 1188 ------------HTIAVDSNYFVYSWGSDKFGQLG-HGTKAVNQSRPKVIEELTGQKIQA 1234

Query: 120  ACAGYSHCLVLTSSGVVTC----THKENGCGSDPSQGVQSNLVQDS-------------- 161
              AG++H +VL  SG +         + G GS  S+ + + +  ++              
Sbjct: 1235 IAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKIT 1294

Query: 162  -------HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACG 214
                   H+ I S N  GE+Y+WG  + GQ+G +     ++KP+ +E+L    +  I+CG
Sbjct: 1295 QIACGFGHSVICSEN--GEVYSWGLGKQGQLG-HKVFENISKPRLIETLRG--VTKISCG 1349

Query: 215  ANHSFVLSKSVSRLYAFGIGSAVQL----DSPKSVHK 247
              H+ V +  +  +Y++G G  ++L    D  +SV K
Sbjct: 1350 HFHT-VATTDLKNVYSWGSGEHMKLGHSSDKDESVPK 1385



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 100/244 (40%), Gaps = 65/244 (26%)

Query: 51   VVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV- 109
             ++   G+ H  V+T            D GE++TWG +  GQLG      K+ S+PKRV 
Sbjct: 1124 AIKVSCGWDHIAVIT------------DDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVD 1171

Query: 110  --KGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITS 167
              +G + + +V+                         CG + +  V SN           
Sbjct: 1172 FFRGKSPIFMVE-------------------------CGGEHTIAVDSNYF--------- 1197

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
                  +Y+WG++++GQ+G        ++P+ +E L    I  IA G  H+ VL KS   
Sbjct: 1198 ------VYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIVLKKS-GE 1250

Query: 228  LYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGD 287
            L++FG G   QL +           H   I + + + A    L  H GG +  +I  G  
Sbjct: 1251 LFSFGYGDFGQLGTGS--------FHSKNIPTRIEINAIMGGLQHHDGGKIT-QIACGFG 1301

Query: 288  HSIV 291
            HS++
Sbjct: 1302 HSVI 1305



 Score = 73.2 bits (178), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 131/279 (46%), Gaps = 51/279 (18%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS+  ++ GEV++WG    GQLG +  +  S+  P+ ++ L  V+ + +C       
Sbjct: 1299 GFGHSVICSENGEVYSWGLGKQGQLGHKVFENISK--PRLIETLRGVTKI-SC------- 1348

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                  G +H++A  D   V++WG   H +LG  S+D K +S+PK V      +V +   
Sbjct: 1349 ------GHFHTVATTDLKNVYSWGSGEHMKLG-HSSD-KDESVPKVVDFFIQKNVSKVVC 1400

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
            G +H + +T    +  +++++               +D        +SP  +Y WG+ E+
Sbjct: 1401 GQNHTMTITFPDDLNNSNQDD---------------EDEENMNGKSSSP--IYAWGSAEH 1443

Query: 183  GQMGINNSNTT----VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
            G++G+     +       P  ++ + +L +  I+CG++ S +++ S + +Y +G G   Q
Sbjct: 1444 GKLGLGGDLKSPFFDKPIPTAIKGVNSLNLIDISCGSDFSAMIT-SNNAIYVWGCGRFGQ 1502

Query: 239  LDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGL 277
            + + K+           W+ + +++    DS   + GGL
Sbjct: 1503 IGNGKN--------DDVWVPTRISLN---DSTKPNFGGL 1530


>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
          Length = 1038

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 109/228 (47%), Gaps = 21/228 (9%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WHS      G++FT+G  T G LG    D++S + PK V+ L+    ++   G  H  
Sbjct: 376 GSWHSALTMSSGKLFTFGDGTFGSLG--HGDRESVAYPKEVEALSGFRAMKVACGVWHSA 433

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +   +G   + A++   ++FTWG     +LG    DK+++ +P  V+ L   +  Q   
Sbjct: 434 AIVEISGQASTNAMSR--KLFTWGDGDKNRLG--HGDKEAKLVPTCVQALVDHNFHQVAC 489

Query: 123 GYSHCLVLTSSG-VVTCTHKENG-CGSDPSQGVQSNLVQDS------------HTTITSL 168
           G+S  + L +SG V T     NG  G+  + G Q  +VQD                + +L
Sbjct: 490 GHSMTVALATSGHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAAL 549

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN 216
            S  E+YTWG    G++G + S     KP  V++L +  +  I+CG+N
Sbjct: 550 TSRSEVYTWGMGANGRLG-HGSVEDKKKPTLVDALKDRHVKSISCGSN 596



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 41/262 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+  +   G+++ WG  ++    L      S  +PKRV G   +  +Q         
Sbjct: 321 GEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSG--PLEGLQ--------- 369

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC 121
           VL+   G WHS      G++FT+G  T G LG    D++S + PK V+ L+    ++ AC
Sbjct: 370 VLSVACGSWHSALTMSSGKLFTFGDGTFGSLG--HGDRESVAYPKEVEALSGFRAMKVAC 427

Query: 122 AGYSHCLVLTSSGVVTCTH-----------KENGCGSDPSQG----------VQSNLVQD 160
             +    ++  SG  +               +N  G    +           V  N  Q 
Sbjct: 428 GVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQV 487

Query: 161 S--HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVE-SLVNLPIALIACGANH 217
           +  H+   +L + G ++T G++  GQ+G  N      +P  V+  L N  +  I+CG+NH
Sbjct: 488 ACGHSMTVALATSGHVFTMGSSNNGQLG--NPKADGKQPCMVQDKLGNELVEEISCGSNH 545

Query: 218 SFVLSKSVSRLYAFGIGSAVQL 239
              L+ S S +Y +G+G+  +L
Sbjct: 546 VAALT-SRSEVYTWGMGANGRL 566



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 5/87 (5%)

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           GE++TWG    G++G + ++T + +P+ VESL    +  IACG  H+ V++ S   LY +
Sbjct: 280 GEVFTWGEELGGRLG-HGTDTDICRPKLVESLAVSNVEYIACGEFHTCVVTAS-GDLYDW 337

Query: 232 GIGS--AVQLDSPKSV-HKTPQLIHGP 255
           G GS  A  L     V H  P+ + GP
Sbjct: 338 GDGSYNAGLLGHGTGVSHWLPKRVSGP 364


>gi|321473328|gb|EFX84296.1| hypothetical protein DAPPUDRAFT_209652 [Daphnia pulex]
          Length = 882

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 33/230 (14%)

Query: 869  LNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISG 928
             ++  N+ L S +   G  V + R P       VA+  FY   L+ V ++  D+  + + 
Sbjct: 417  FDTRKNDPLMSEL---GVNVLDCRQPP------VAFADFYNEPLSDVVEMDRDFAYFAAA 467

Query: 929  RP------NGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHT 982
                    N + +    N+PFI    AK   L  D RI+M     Q+   +F    N   
Sbjct: 468  SEAPPSASNNALKISFMNFPFILTPAAKALGLYYDNRIRMYSERRQS---IFNSVMNGQP 524

Query: 983  LNQYLEVEVSRDNIVEDTIRELAQYTT---NDFKKPLKVNDTSPIYLAPQVKFRGEEAED 1039
             N YL++++ RD++++D +  L   T    +D KK L V            +F GE+  D
Sbjct: 525  SNPYLKLKIRRDHVIDDALIGLEMATMENPSDLKKQLVV------------EFEGEQGID 572

Query: 1040 AGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             GG+ +EF  L++ ++ +P Y MF    +TR+ WF+  +FE    + LIG
Sbjct: 573  EGGLSKEFFQLVIDQVFNPDYAMFAFNSDTRNFWFNPTSFESDAQFTLIG 622



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 57/91 (62%)

Query: 727 ETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDL 786
           +TR+ WF+  +FE      LIG + GLAIYN  I+++ FP+ +Y+K+L      +DL++L
Sbjct: 601 DTRNFWFNPTSFESDAQFTLIGIMLGLAIYNTIILDIHFPMVVYRKLLGRKGTFEDLQEL 660

Query: 787 SPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
            PTL K L ++L+Y + D+E+    TF   Y
Sbjct: 661 DPTLWKGLTELLEYPDSDIEETLMQTFSISY 691


>gi|91091506|ref|XP_969096.1| PREDICTED: similar to AGAP012366-PA [Tribolium castaneum]
 gi|270000934|gb|EEZ97381.1| hypothetical protein TcasGA2_TC011206 [Tribolium castaneum]
          Length = 880

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 90/191 (47%), Gaps = 23/191 (12%)

Query: 902  VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQ 961
            + ++ FY   L+   ++  D+  + S     S      NYPFI     K   L  D RI+
Sbjct: 450  LPFSEFYNEPLSDGVEMDRDFANYKSELGKFS----FMNYPFILTPATKMMGLYFDNRIR 505

Query: 962  MEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTT---NDFKKPLKV 1018
            M      +     LQ+      N YL ++V RD+I++D + EL   +    ND KK L V
Sbjct: 506  MYSERRIS----ILQSVTGQPSNPYLRLKVRRDHIIDDALVELEMISMENPNDLKKQLVV 561

Query: 1019 NDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDT 1078
                        +F GE+  D GGV +EF  L+++EI +P Y MF    ET ++WF+  +
Sbjct: 562  ------------EFEGEQGIDEGGVSKEFFQLVIEEIFNPDYAMFTSQSETGTVWFNPTS 609

Query: 1079 FEDQNMYFLIG 1089
            FE    + LIG
Sbjct: 610  FESDAQFTLIG 620



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 61/95 (64%)

Query: 723 TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQD 782
           T   ET ++WF+  +FE      LIG + GLAIYN  I+ + FP+ LY+K+L +    +D
Sbjct: 595 TSQSETGTVWFNPTSFESDAQFTLIGIVLGLAIYNNVILAVNFPMVLYRKLLGKRGSFED 654

Query: 783 LKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
           L+D + TL  SL+ +L+Y EPD+E+VF  TFR  Y
Sbjct: 655 LQDWNLTLYNSLKQLLEYNEPDVEEVFMQTFRISY 689


>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
           carolinensis]
          Length = 526

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 101/233 (43%), Gaps = 60/233 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGL--ASVSVVQACAGYSH 60
           G  HS+ L   GEV+TWG +  GQ+G  S    +Q+IP+RV       ++V  AC     
Sbjct: 136 GSHHSMILTSDGEVYTWGYNNSGQVG--SGSTANQAIPRRVTSCLQNKIAVNIAC----- 188

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                   G   S+A+ + GEV+ WG + +GQLGL   +  +Q  P R+  L  + V + 
Sbjct: 189 --------GQMCSMAVVENGEVYVWGYNGNGQLGL--GNSGNQPTPCRIAALQGIRVQRV 238

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
             GY+H LVLT  G                                      ++Y WG N
Sbjct: 239 ACGYAHTLVLTDEG--------------------------------------QMYAWGAN 260

Query: 181 EYGQMGINN-SNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
            YGQ+G  N SN +   P  V+   +  I + AC + H+       S++Y +G
Sbjct: 261 SYGQLGTGNRSNQSYPVPITVDK--DRVIEIAACHSAHTSAAKTQGSQVYMWG 311



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 48/79 (60%), Gaps = 1/79 (1%)

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           + GE+YTWG+N Y Q+G   +N ++   Q   +LVN  +  +ACG++HS +L+ S   +Y
Sbjct: 92  AEGEVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILT-SDGEVY 150

Query: 230 AFGIGSAVQLDSPKSVHKT 248
            +G  ++ Q+ S  + ++ 
Sbjct: 151 TWGYNNSGQVGSGSTANQA 169



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 94/237 (39%), Gaps = 63/237 (26%)

Query: 8   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS---HCLVL 64
           L + +  EVF  G +  G LG+   D ++   P+R+  L    +   C  Y    H +V 
Sbjct: 35  LYVTENNEVFALGTNCSGCLGV--GDTQNSVEPRRLDTLCGKKIT--CLSYGSGPHVVVA 90

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAG 123
           T+             GEV+TWG + + QLG  +    +  +P ++   L +  V +   G
Sbjct: 91  TAE------------GEVYTWGHNAYSQLG--NGTTNNSLLPCQISTNLVNKKVTEVACG 136

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
             H ++LTS G                                      E+YTWG N  G
Sbjct: 137 SHHSMILTSDG--------------------------------------EVYTWGYNNSG 158

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIAL-IACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           Q+G + S      P+RV S +   IA+ IACG   S  + ++   +Y +G     QL
Sbjct: 159 QVG-SGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVEN-GEVYVWGYNGNGQL 213


>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
           [Brachypodium distachyon]
          Length = 1005

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 115/242 (47%), Gaps = 27/242 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WH+  ++  G++FT+G  T G LG    D  S + PK V+ L  + V     G  H  
Sbjct: 383 GQWHTAIISSSGQLFTYGDGTFGVLG--HGDTSSVARPKEVESLKGLRVKAVACGPWHTA 440

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +    G   S A +  G++FTWG    G+LG   +DK+S+ +P  VK L      Q   
Sbjct: 441 AIVEILGTVKSNAPS--GKLFTWGDADRGKLG--HSDKESKLVPTCVKALTDSDFAQVSC 496

Query: 123 GYSHCLVLTSSGVV-TCTHKENG------------C---GSDPSQGVQSNLVQDSHTTIT 166
             +  + LT +GVV T   KE+G            C   G   ++ V+      SH  + 
Sbjct: 497 AKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSICSVEGPLKTEFVREISSGSSHVAVL 556

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV--LSKS 224
           ++N  G+++TWG    GQ+G+ N     + P  VE+L +  +  IACG+N +    L +S
Sbjct: 557 TMN--GKVFTWGKGTEGQLGLGN-YVDRSSPTLVEALEDKQVDSIACGSNFTVAVCLHRS 613

Query: 225 VS 226
           +S
Sbjct: 614 IS 615



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 58/222 (26%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYSH 60
           G  H+  +   GEVF+WG +  G+LG     K S  +  PK ++ LA          ++H
Sbjct: 276 GEKHAAIVTKQGEVFSWGKEDGGRLG----HKVSVGVLHPKIIESLA----------FTH 321

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQ 119
              +    G  H+ AL   GE+F WG  TH     +   ++SQ  P ++ G L  VSVV+
Sbjct: 322 VKAI--AFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVK 379

Query: 120 ACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGN 179
              G  H  +++SS                                      G+L+T+G+
Sbjct: 380 MACGQWHTAIISSS--------------------------------------GQLFTYGD 401

Query: 180 NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
             +G +G +   ++V +P+ VESL  L +  +ACG  H+  +
Sbjct: 402 GTFGVLG-HGDTSSVARPKEVESLKGLRVKAVACGPWHTAAI 442



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 46/222 (20%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQ-ACAGYSH 60
           G  H+ AL   GE+F WG  TH     +   ++SQ  P ++ G L  VSVV+ AC     
Sbjct: 328 GAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMAC----- 382

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                   G WH+  ++  G++FT+G  T G LG    D  S + PK V+ L  + V   
Sbjct: 383 --------GQWHTAIISSSGQLFTYGDGTFGVLG--HGDTSSVARPKEVESLKGLRVKAV 432

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
             G  H   +     +  T K N     PS                     G+L+TWG+ 
Sbjct: 433 ACGPWHTAAIVE---ILGTVKSNA----PS---------------------GKLFTWGDA 464

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
           + G++G ++  + +  P  V++L +   A ++C    +  L+
Sbjct: 465 DRGKLGHSDKESKLV-PTCVKALTDSDFAQVSCAKALTVALT 505


>gi|327298475|ref|XP_003233931.1| hypothetical protein TERG_05800 [Trichophyton rubrum CBS 118892]
 gi|326464109|gb|EGD89562.1| hypothetical protein TERG_05800 [Trichophyton rubrum CBS 118892]
          Length = 1178

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 26/222 (11%)

Query: 874  NETLTSSISAGGRTVSNIRTPA-PHGGR--KVAYTAFYMPDLATVCDIRIDYFRWISGRP 930
            N T  S    GG +   + + + P+  R  K+  + FY   L    D+ +D+  W S   
Sbjct: 700  NGTGNSRRVEGGPSARELPSGSEPNSNRLNKIPISCFYNARL-DYADLILDFEAWESR-- 756

Query: 931  NGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVE 990
              S +   C Y F+    AK  ++E D R QME    +  F   L       ++QYL + 
Sbjct: 757  --SGKFSFCQYSFLLSIWAKIQIMEHDARRQMEAKAREAFFDTILGR---RGVSQYLVLN 811

Query: 991  VSRDNIVEDTIRELAQY---TTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREF 1047
            V RD + ED+++ ++        D KK L++            +F GEE  DAGG+R+E+
Sbjct: 812  VRRDCLAEDSLQSVSSVIGSAEEDIKKGLRI------------EFAGEEGIDAGGLRKEW 859

Query: 1048 LMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             +LL++E+ DP +G+F   E+++  +F+   FE    +FL+G
Sbjct: 860  FLLLVREVFDPLHGLFLYDEDSQYCYFNPYCFESSEQFFLVG 901



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 17/100 (17%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILD------EPIL 779
           E+++  +F+   FE     FL+G + GLAIYN TI+++  P   ++K+L        P L
Sbjct: 879 EDSQYCYFNPYCFESSEQFFLVGVVLGLAIYNSTILDIALPPFAFRKLLAYSPSNVAPTL 938

Query: 780 ----------LQDLKDLSPTLAKSLQDILDYREPDLEDVF 809
                     L DL +  P LAK L+ +L+Y + D+ + F
Sbjct: 939 SSPPQPFKPTLDDLAEFRPALAKGLRQLLEY-DGDVAETF 977


>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
 gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
          Length = 4908

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 106/234 (45%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A++  GE++TWG   +G+LG    D  +Q  PK V  LA   VVQ   G     
Sbjct: 3130 GSSHSAAISSQGELYTWGLGEYGRLG--HGDNVTQLKPKLVVALAGRRVVQVACGSRDA- 3186

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL + G VF+WG    G+LG      +    P  ++ L+ + VVQ   
Sbjct: 3187 ---------QTLALTEDGAVFSWGDGDFGKLG--RGGSEGSDTPHEIERLSGIGVVQIEC 3235

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-------PSQGVQSNLVQDSHTTITSLN-- 169
            G    L LT +G V    K +    G G D       P  G++   V   H  + +L+  
Sbjct: 3236 GAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRV--IHVAVGALHCL 3293

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G  N+     KP  V  L  + +  +ACG++HS  
Sbjct: 3294 AVTDAGQVYAWGDNDHGQQGSGNTFVN-KKPALVIGLDAVFVNRVACGSSHSIA 3346



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 29/236 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   G V TWG   +G+LG    D + Q  PK V+ L     +    G     
Sbjct: 4192 GSAHSAAITASGHVLTWGKGRYGRLG--HGDSEDQLRPKLVEALLGYRAIDIACG----- 4244

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L + D   V++WG   +G+LG   +D     +P +++ LA + VV+   
Sbjct: 4245 -----SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD--GCKLPYKIESLAGLGVVKVEC 4297

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGS-----DPS-----QGVQSNLVQDSHTTITSL 168
            G    + LT SG V    K +    G GS      P      QG +   +        + 
Sbjct: 4298 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVAC 4357

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
            +  GE+YTWG+N+ GQ+G + + T + +P+ V +L    I  + CG+ H+  LS S
Sbjct: 4358 SDSGEVYTWGDNDEGQLG-DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4412



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 120/270 (44%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+LAL   G+VF+WG    G+LG    ++ +   P+ V+ L +  +     G S  
Sbjct: 3077 SGGKHALALTLDGKVFSWGEGEDGKLG--HGNRTTLDKPRLVEALRAKKIRDVACGSS-- 3132

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      HS A++  GE++TWG   +G+LG    D  +Q  PK V  LA   VVQ  
Sbjct: 3133 ----------HSAAISSQGELYTWGLGEYGRLG--HGDNVTQLKPKLVVALAGRRVVQVA 3180

Query: 122  AGY--SHCLVLTSSGVVTC--------THKENGCGSDPSQ------GVQSNLVQDSHTTI 165
             G   +  L LT  G V            +    GSD         G+    ++      
Sbjct: 3181 CGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFS 3240

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   GE++TWG  +Y ++G +  +  V KPQ +  L    +  +A GA H   ++ + 
Sbjct: 3241 LALTRAGEVWTWGKGDYYRLG-HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDA- 3298

Query: 226  SRLYAFGIGSAVQLDSPKS-VHKTPQLIHG 254
             ++YA+G     Q  S  + V+K P L+ G
Sbjct: 3299 GQVYAWGDNDHGQQGSGNTFVNKKPALVIG 3328



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 114/290 (39%), Gaps = 72/290 (24%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+      ++ WG +  GQL GLE +  K+   P   + L+ +  VQ   G      +T
Sbjct: 4038 ALSWGGASTIYGWGHNHRGQLGGLEGSRIKT---PTPCEALSLLRPVQLAGGEQSLFAVT 4094

Query: 66   S------------------------------------------TTGLWHSLALNDCGEVF 83
                                                        +G  H LAL   GEV+
Sbjct: 4095 PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVY 4154

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
             WG    G+LG    ++ S   PK V+ L  +SV     G +H   +T+SG V    K  
Sbjct: 4155 AWGEGEDGKLG--HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGR 4212

Query: 144  ----GCGSDPSQGVQSNLVQ---------------DSHTTITSLNSPGELYTWGNNEYGQ 184
                G G    Q ++  LV+               D+ T   + +    +++WG+ +YG+
Sbjct: 4213 YGRLGHGDSEDQ-LRPKLVEALLGYRAIDIACGSGDAQTLCITDDD--NVWSWGDGDYGK 4269

Query: 185  MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
            +G   S+     P ++ESL  L +  + CG+  S  L+KS + +Y +G G
Sbjct: 4270 LGRGGSD-GCKLPYKIESLAGLGVVKVECGSQFSVALTKSGA-VYTWGKG 4317



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 108/238 (45%), Gaps = 31/238 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   G + TWG  T+ +LG  ++D +  S+P  V  L+   VV    G     
Sbjct: 673 GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDR--SLPTLVVALSDHMVVDVALG----- 725

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G  HSLAL   G VF WG   +G+LG  + +   Q  P  V+ L  V  V A +
Sbjct: 726 -----SGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQ--PILVESLPRVQRVFAGS 778

Query: 123 GYSHCLV----LTSSGVVTCTHKE------NGCGSDPS--QGVQSNLVQDSHTTIT---S 167
            +S  L     L S G  TC   +       GC S P     +Q   + D   ++    +
Sbjct: 779 QFSLALSSEGQLYSWGKATCLGHQLVERSVQGC-SVPRLVSSLQHKRIVDVAVSVAHCLA 837

Query: 168 LNSPGELYTWGNNEYGQM-GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
           L+S GE++ WG N+  Q+   + S+  + +   + SL   P + IAC +  S V ++S
Sbjct: 838 LSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSLPTFPASGIACTSAQSLVWTQS 895



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 53/209 (25%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  +P ++  L    VV+  A +S         G  H+
Sbjct: 3035 GKVYACGEGTNGRLGL--GVTHNVPLPHQLPVLHQY-VVKKVAVHS---------GGKHA 3082

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL   G+VF+WG    G+LG    ++ +   P+ V+ L +  +     G SH       
Sbjct: 3083 LALTLDGKVFSWGEGEDGKLG--HGNRTTLDKPRLVEALRAKKIRDVACGSSHS------ 3134

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                                             +++S GELYTWG  EYG++G +  N T
Sbjct: 3135 --------------------------------AAISSQGELYTWGLGEYGRLG-HGDNVT 3161

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLS 222
              KP+ V +L    +  +ACG+  +  L+
Sbjct: 3162 QLKPKLVVALAGRRVVQVACGSRDAQTLA 3190



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 60/229 (26%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LA++     ++WG     +LG    D  ++++P ++  L      Q C    +C    
Sbjct: 624 HFLAIDSNHNAYSWGTGEDHRLG--HGDTHARAVPTKIAALE-----QHCVQSVYC---- 672

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC--AG 123
              G  +S A+   G + TWG  T+ +LG  ++D +S  +P  V  L+   VV     +G
Sbjct: 673 ---GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRS--LPTLVVALSDHMVVDVALGSG 727

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
            +H L LTS G+V                                      + WG+ +YG
Sbjct: 728 DAHSLALTSEGLV--------------------------------------FAWGDGDYG 749

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           ++G  N N ++ +P  VESL    +  +  G+  S  LS S  +LY++G
Sbjct: 750 KLGNGNCNGSL-QPILVESLPR--VQRVFAGSQFSLALS-SEGQLYSWG 794



 Score = 43.9 bits (102), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 6/68 (8%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYS 59
            TG  H +A +D GEV+TWG +  GQLG    D    +I  P+ V  L    +V+   G +
Sbjct: 4349 TGSLHCVACSDSGEVYTWGDNDEGQLG----DGTVTAIQRPRLVAALQGKHIVKVTCGSA 4404

Query: 60   HCLVLTST 67
            H L L+++
Sbjct: 4405 HTLALSTS 4412


>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1457

 Score = 88.2 bits (217), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 120/253 (47%), Gaps = 40/253 (15%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            TG WHSLAL   G V+ WG +  GQLG       S++ P RV GL  V  + A  GY   
Sbjct: 1163 TGAWHSLALRSDGTVWAWGANGFGQLG--DGTTLSRTTPVRVAGLQKVVAIGA-GGY--- 1216

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      H+LA+   G V+ WG +  GQLG  +A+  S+ +P RV+GL++V+ V   
Sbjct: 1217 ----------HALAVRSDGSVWAWGYNAFGQLGDGTAE--SRLLPVRVEGLSNVTSV--A 1262

Query: 122  AGYSHCLVLTSSGVVTC----THKENGCGSDPSQ----------GVQSNLVQDSHTTITS 167
             G  H L L + G +         + G G+  ++          GV       +HT   +
Sbjct: 1263 GGDHHSLALLADGSLGAWGNNAAGQLGDGTGTTRYSRVWVKGVDGVVEVRAGAAHT--LA 1320

Query: 168  LNSPGELYTWGNNEYGQMGINNSNT-TVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            L   G ++TWG+N + Q+G  + +T T   P+ V  L    +  I  GA HSF +    +
Sbjct: 1321 LRGDGTVWTWGDNTHSQLGAGDDSTRTRIVPRPVPGLSG--VTAIGAGARHSFAVGPKGT 1378

Query: 227  RLYAFGIGSAVQL 239
             ++A+G  S  QL
Sbjct: 1379 -VWAWGRNSHGQL 1390



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 119/286 (41%), Gaps = 88/286 (30%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G +H+LA+   G V+ WG +  GQLG  +A+  S+ +P RV+GL++V+ V     +S  L
Sbjct: 1214 GGYHALAVRSDGSVWAWGYNAFGQLGDGTAE--SRLLPVRVEGLSNVTSVAGGDHHSLAL 1271

Query: 63   VLTSTTGLW------------------------------------HSLALNDCGEVFTWG 86
            +   + G W                                    H+LAL   G V+TWG
Sbjct: 1272 LADGSLGAWGNNAAGQLGDGTGTTRYSRVWVKGVDGVVEVRAGAAHTLALRGDGTVWTWG 1331

Query: 87   GDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCG 146
             +TH QLG      +++ +P+ V GL+ V+ +   AG  H   +   G V          
Sbjct: 1332 DNTHSQLGAGDDSTRTRIVPRPVPGLSGVTAI--GAGARHSFAVGPKGTV---------- 1379

Query: 147  SDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNL 206
                                        + WG N +GQ+G+ + N    +P RV+ L   
Sbjct: 1380 ----------------------------WAWGRNSHGQLGLGD-NANRAEPLRVKELAE- 1409

Query: 207  PIALIACGANHSFVLSKS------VSRLY-AFGIGSAVQLDSPKSV 245
             +++++ GA+ S  + +        S L+ A G+G+A Q  SP  V
Sbjct: 1410 -VSVVSGGADFSLAMQRDGTVSSWGSSLHGALGLGTAGQRSSPGQV 1454



 Score = 77.4 bits (189), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 101/234 (43%), Gaps = 62/234 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            H++AL   G V  WG + HGQLG  + ++++   P  V+GL  V  V             
Sbjct: 1117 HAVALMADGTVQAWGDNAHGQLGDGTTERRA--APVVVRGLTGVVAV------------- 1161

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
             +TG WHSLAL   G V+ WG +  GQLG       S++ P RV GL  V  + A  GY 
Sbjct: 1162 -STGAWHSLALRSDGTVWAWGANGFGQLG--DGTTLSRTTPVRVAGLQKVVAIGA-GGY- 1216

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
            H L                                      ++ S G ++ WG N +GQ+
Sbjct: 1217 HAL--------------------------------------AVRSDGSVWAWGYNAFGQL 1238

Query: 186  GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
            G   + + +  P RVE L N  +  +A G +HS  L    S L A+G  +A QL
Sbjct: 1239 GDGTAESRLL-PVRVEGLSN--VTSVAGGDHHSLALLADGS-LGAWGNNAAGQL 1288



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 112/267 (41%), Gaps = 46/267 (17%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQS-----IPKRVKGLASVSVVQACAGYSH 60
           HSL ++  G V+ WGG+T GQLG E+   +  +      P+ +     VSVV   A    
Sbjct: 60  HSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPSPRDI-----VSVVSGEA---- 110

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                      HSLAL++ G V+ WGG++ GQLG        +  P +V GL    VV  
Sbjct: 111 -----------HSLALDEAGTVWAWGGNSSGQLG--DGTTTDRVTPMQVAGL--TDVVAV 155

Query: 121 CAGYSHCLVLTSSGVVTC-----------THKENGCGSDPSQGVQSNLVQDSHTTIT-SL 168
            AG  H L L   G V              H E G   +P  G++  +   +    T ++
Sbjct: 156 AAGDFHSLALRGDGTVWAWGTNFHGQLGRGHTEPGLTPEPVPGLEGVVALAAGFDFTLAV 215

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
              G +  WG N  GQ+G + + T    P  V  +    I+ +  G  H+  L K    +
Sbjct: 216 MDDGTVRAWGANSSGQLG-DGTFTQRLAPVEVAHISG--ISAVTAGTYHAVALGKD-GGV 271

Query: 229 YAFGIGSAVQL-DSPKSVHKTPQLIHG 254
           + +G  S+ QL D   S    P  + G
Sbjct: 272 WTWGANSSGQLGDGAWSDRAVPARVPG 298



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 110/258 (42%), Gaps = 38/258 (14%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            SLA+   G  + WG +  GQLG       SQ +PK+V    SV  V+A +  +H      
Sbjct: 962  SLAVRQDGTAWAWGANPSGQLG--DGTNHSQRVPKQVT---SVKRVRAMSAGAH------ 1010

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
                 H +AL + G V+TWG +T GQLG +     +   P++V  L  V  V A   +S 
Sbjct: 1011 -----HVVALGEDGAVWTWGDNTLGQLG-DGTSAPTWMWPRQVPELRDVEAVAAGEQFS- 1063

Query: 127  CLVLTSSGVVTCTHKENGCGSDPSQG-----VQ-----SNLVQDSHTT------ITSLNS 170
              VL   G       E G   D   G     VQ     S L Q   T         +L +
Sbjct: 1064 VAVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMA 1123

Query: 171  PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
             G +  WG+N +GQ+G + +      P  V  L    +  ++ GA HS  L +S   ++A
Sbjct: 1124 DGTVQAWGDNAHGQLG-DGTTERRAAPVVVRGLTG--VVAVSTGAWHSLAL-RSDGTVWA 1179

Query: 231  FGIGSAVQLDSPKSVHKT 248
            +G     QL    ++ +T
Sbjct: 1180 WGANGFGQLGDGTTLSRT 1197



 Score = 66.6 bits (161), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 130/308 (42%), Gaps = 48/308 (15%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL++ G V+ WGG++ GQLG        +  P +V GL  V  V A           
Sbjct: 111 HSLALDEAGTVWAWGGNSSGQLG--DGTTTDRVTPMQVAGLTDVVAVAA----------- 157

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G +HSLAL   G V+ WG + HGQLG      +    P+ V GL    VV   AG+ 
Sbjct: 158 ---GDFHSLALRGDGTVWAWGTNFHGQLG--RGHTEPGLTPEPVPGLE--GVVALAAGFD 210

Query: 126 HCLVLTSSGVVTC----THKENGCGS-----DPSQ-----GVQSNLVQDSHTTITSLNSP 171
             L +   G V      +  + G G+      P +     G+ +      H    +L   
Sbjct: 211 FTLAVMDDGTVRAWGANSSGQLGDGTFTQRLAPVEVAHISGISAVTAGTYHA--VALGKD 268

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G ++TWG N  GQ+G + + +    P RV  L    +  +A     S  L ++ S L A+
Sbjct: 269 GGVWTWGANSSGQLG-DGAWSDRAVPARVPGLER--VKAVASMDASSLALLEAGSVL-AW 324

Query: 232 GIGSAVQL-DSPKSVHKTPQLIHGPWIASPVAMTA-------GEDSLVSHSGGLVVKKIY 283
           G   + QL DS      TP  + G    + V   A       G+ +L +  GGL  +  +
Sbjct: 325 GANGSGQLGDSGTDDRATPGEVPGLRSVAAVVGGAQHALALRGDGTLWAWGGGLAGQLGH 384

Query: 284 SGGDHSIV 291
            G +  +V
Sbjct: 385 GGSERHVV 392



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 105/282 (37%), Gaps = 89/282 (31%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           SLAL + G V  WG +  GQLG    D ++   P  V GL SV+ V    G  H L L  
Sbjct: 312 SLALLEAGSVLAWGANGSGQLGDSGTDDRA--TPGEVPGLRSVAAV--VGGAQHALALRG 367

Query: 67  TTGLW--------------------------------------HSLALNDCGEVFTWGGD 88
              LW                                      HSLA    G V++WG +
Sbjct: 368 DGTLWAWGGGLAGQLGHGGSERHVVPAPLLRLADVASMAAGSFHSLAALGDGTVWSWGRN 427

Query: 89  THGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSD 148
           T+GQLG  +  ++  ++  RV+GL+ +                  GV    H     G+D
Sbjct: 428 TYGQLGDGTTAERHAAV--RVEGLSGI-----------------RGVAASGHHSLAVGAD 468

Query: 149 PSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPI 208
                                  G ++ WG N  GQ+G + S     +P  V  L +  +
Sbjct: 469 -----------------------GTVWAWGRNAAGQLG-DGSTRDRARPVAVSGLTS--V 502

Query: 209 ALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TP 249
             +A G +H+  L +    ++A+G  +  QL    +V + TP
Sbjct: 503 VAVATGGSHTMAL-RGDGTVWAWGYNALGQLGDGTTVDRLTP 543



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 109/276 (39%), Gaps = 65/276 (23%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G+ HSLAL   G V+ WG +  GQLG       S+ IP RV GL     V A    S  
Sbjct: 807  SGVLHSLALACDGSVWAWGANGRGQLG--DGTTASRVIPARVDGLQGAVAVAAGGDASLA 864

Query: 62   LVLTSTTGLW------------------------------------HSLALNDCGEVFTW 85
            L+   T   W                                    H LA  + G ++ W
Sbjct: 865  LLADGTAWAWGANAHGQLGDGSTSDRAVPGQLKLPSNIMSVALGETHGLAAGEDGALWAW 924

Query: 86   GGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC----THK 141
            G +  GQLG E +   S + P RVKGL  V+ V   AG +  L +   G           
Sbjct: 925  GANGSGQLG-EGSTTPSPT-PVRVKGLEGVASV--SAGRAFSLAVRQDGTAWAWGANPSG 980

Query: 142  ENGCGSDPSQGVQSNLVQ---------DSHTTITSLNSPGELYTWGNNEYGQMGINNSNT 192
            + G G++ SQ V   +            +H  + +L   G ++TWG+N  GQ+G   S  
Sbjct: 981  QLGDGTNHSQRVPKQVTSVKRVRAMSAGAH-HVVALGEDGAVWTWGDNTLGQLGDGTSAP 1039

Query: 193  TVTKPQRVESLVNL---------PIALIACGANHSF 219
            T   P++V  L ++          +A++  G  H++
Sbjct: 1040 TWMWPRQVPELRDVEAVAAGEQFSVAVLVGGGAHAW 1075



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 126/304 (41%), Gaps = 63/304 (20%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           TG  H++AL   G V+ WG +  GQLG        +  P RV  L SV  V A   +S  
Sbjct: 507 TGGSHTMALRGDGTVWAWGYNALGQLG--DGTTVDRLTPVRVARLDSVVAVAAGTYFSMA 564

Query: 62  LVLTSTTGLW------------------------------------HSLALNDCGEVFTW 85
           L    T   W                                    H+LA+   G V+ W
Sbjct: 565 LRGDGTVWTWGEGFEGQVGDGGGVQRLFPVQVAGLTNVTRVAAGSAHALAVRGDGTVWAW 624

Query: 86  GGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC----THK 141
           G +  GQLG  +   + +  P +V GL  ++ V    G SH + L   G V       + 
Sbjct: 625 GDNGEGQLGDGTWSDRFR--PVQVPGLTGITAV--SGGRSHSMALHGDGSVRAWGYNGYG 680

Query: 142 ENGCGSDPSQ----------GVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
           + G G+  S+          G+Q+  +  SH  + +L++ G L  WG N +GQ+G+  + 
Sbjct: 681 QLGDGTFTSRVRPAVVPGLTGIQA--LHPSHLHVLALHADGTLRGWGYNRFGQLGLGAAG 738

Query: 192 TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKT-PQ 250
            + ++P +V  L    +  +A G  H+ ++ +    + A+G  ++ QL    + H+  P 
Sbjct: 739 WS-SRPVQVRGLGR--VDRLAVGRAHTLMV-RPDGAVLAWGENASGQLGDGTTTHRAGPV 794

Query: 251 LIHG 254
           L+ G
Sbjct: 795 LVRG 798



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 106/258 (41%), Gaps = 33/258 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+L +   G V  WG +  GQLG  +   ++   P  V+G+  V  V             
Sbjct: 761 HTLMVRPDGAVLAWGENASGQLGDGTTTHRAG--PVLVRGVPCVRSV------------- 805

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
             +G+ HSLAL   G V+ WG +  GQLG       S+ IP RV GL     V A    S
Sbjct: 806 -ASGVLHSLALACDGSVWAWGANGRGQLG--DGTTASRVIPARVDGLQGAVAVAAGGDAS 862

Query: 126 HCLVL--TSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSP--------GELY 175
             L+   T+       H + G GS   + V   L   S+    +L           G L+
Sbjct: 863 LALLADGTAWAWGANAHGQLGDGSTSDRAVPGQLKLPSNIMSVALGETHGLAAGEDGALW 922

Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
            WG N  GQ+G   S T    P RV+ L    +A ++ G   S  + +  +  +A+G   
Sbjct: 923 AWGANGSGQLG-EGSTTPSPTPVRVKGLEG--VASVSAGRAFSLAVRQDGT-AWAWGANP 978

Query: 236 AVQL-DSPKSVHKTPQLI 252
           + QL D      + P+ +
Sbjct: 979 SGQLGDGTNHSQRVPKQV 996


>gi|442319627|ref|YP_007359648.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441487269|gb|AGC43964.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1096

 Score = 88.2 bits (217), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 130/277 (46%), Gaps = 45/277 (16%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSL L   G V++WGG+ +GQLG  S   +   +P RV  L S++ + A           
Sbjct: 58  HSLVLKADGTVWSWGGNNYGQLGTGS--TRQNPMPARVWRLFSITAIGA----------- 104

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HSLAL   G V++WG +T+GQLG       S+S+P  V GL   +VV   AG+S
Sbjct: 105 ---GELHSLALKSDGTVWSWGANTNGQLG--DGTLISRSVPAPVPGL--TNVVAIAAGFS 157

Query: 126 HCLVLTSSGVVTC----THKENGCGS-----DPSQ-----GVQSNLVQDSHTTITSLNSP 171
           H +VL + G V         + G G+      P Q     GV+     + H+   +L + 
Sbjct: 158 HSMVLKADGTVWAWGLNAAGQLGDGTPTRRLTPVQVLGLTGVKDIAAGNVHS--LALTAD 215

Query: 172 GELYTWGNNEYGQMGINN--SNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           G L+TWG N  GQ+G  +    +T      +  +V L     + G +HS +L K    ++
Sbjct: 216 GRLWTWGGNVDGQLGTGDLVGRSTAAALPGMTGVVAL-----SGGGSHSLIL-KMDGSVW 269

Query: 230 AFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAG 266
           ++G   A QL    SV  TP     P +   VA+T G
Sbjct: 270 SWGKNDAGQL-GLGSVVSTPTPTQVPGLTEMVAVTGG 305



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 41/261 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL + G V+ WG +  G +G  +A  +SQ  P +V G                +
Sbjct: 456 GTYHSLALKEDGTVWGWGANYWGAIGDGTALNRSQ--PVKVSGT--------------LV 499

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T  +G +HSLAL+  G V+ WG ++ GQLG +     +++ P RV  L    VV   A
Sbjct: 500 AMTVASGNFHSLALSVDGSVWAWGDNSLGQLG-DGTVTPTRNAPFRVPNLE--GVVSLAA 556

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPS------------QGVQSNLVQDS---HTTITS 167
           G  H L L + G V    +++ C +DP             QG+   +   +   H+ +  
Sbjct: 557 GGEHSLALKADGTVWVWGRQDTC-ADPENVGRVLRVPEQVQGLTDAVAVRAGRCHSVV-- 613

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L + G L+ WG N  GQ+  + + T    P RV+ L    +   + G+  +  L K+   
Sbjct: 614 LRADGTLWAWGRNAEGQL-ADGTFTDRMTPARVDGLTG--VISFSVGSEQTLAL-KADGT 669

Query: 228 LYAFGIGSAVQLDSPKSVHKT 248
            +A+G  +  QL    SV +T
Sbjct: 670 AWAWGPNAQGQLGGGLSVPRT 690



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 92/227 (40%), Gaps = 62/227 (27%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL   G V +WG +  G+LG         ++ +R       +VV   AG     VL+
Sbjct: 809 HGLALKTDGRVLSWGANAEGELG------DGTTVARRAP-----AVVGPLAG-----VLS 852

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HSLAL   G V  WG +  GQLG       S+ +P RV+GL  V+ + A  G+S
Sbjct: 853 IAVGARHSLALLGDGSVQAWGSNIQGQLG--DGTTVSRVLPVRVQGLTGVAAIAAGDGFS 910

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                                                    +L   G ++ WG N  GQ+
Sbjct: 911 ----------------------------------------LALKHDGTVWAWGGNTLGQL 930

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           G N +  ++  P R ++L    +  +A G NHS  L K    L+A+G
Sbjct: 931 GDNTTLRSLV-PVRTQALTG--VTAVAAGRNHSLAL-KGDGTLWAWG 973



 Score = 60.5 bits (145), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 97/241 (40%), Gaps = 67/241 (27%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HSLAL   G V  WG +  GQLG       S+ +P RV+GL  V+ + A  G+S  L   
Sbjct: 859  HSLALLGDGSVQAWGSNIQGQLG--DGTTVSRVLPVRVQGLTGVAAIAAGDGFSLALKHD 916

Query: 66   STTGLW------------------------------------HSLALNDCGEVFTWGGDT 89
             T   W                                    HSLAL   G ++ WG +T
Sbjct: 917  GTVWAWGGNTLGQLGDNTTLRSLVPVRTQALTGVTAVAAGRNHSLALKGDGTLWAWGSNT 976

Query: 90   HGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDP 149
            +G+LG  +  +K    P +V  L  VS + A  G  H L +TS G      K  G G + 
Sbjct: 977  YGELGDGTQARKL--APVQVTSLTGVSALDA--GDHHSLAVTSGG------KVWGWGRNQ 1026

Query: 150  ----SQGVQSNL----VQ-DSHTTITSLNSPGE----------LYTWGNNEYGQMGINNS 190
                 +GV+SN      Q    T+  ++   GE          ++ WG+ + GQ+G   S
Sbjct: 1027 FGQVGKGVKSNWQLLPAQVPGLTSAVAVAGGGEHSLALLSDRSVWAWGHGDMGQLGTGMS 1086

Query: 191  N 191
            N
Sbjct: 1087 N 1087



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 110/300 (36%), Gaps = 67/300 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL   G ++TWGG+  GQLG  + D   +S    + G+    VV    G SH L+L 
Sbjct: 208 HSLALTADGRLWTWGGNVDGQLG--TGDLVGRSTAAALPGM--TGVVALSGGGSHSLILK 263

Query: 66  STTGLW--------------------------------------HSLALNDCGEVFTWGG 87
               +W                                      HS+AL   G V+ WG 
Sbjct: 264 MDGSVWSWGKNDAGQLGLGSVVSTPTPTQVPGLTEMVAVTGGGQHSVALRVDGTVWAWGS 323

Query: 88  DTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC--THKENGC 145
           +   QLG     +  +  P +V GL  V  V A  G  H + +  +G V    ++ E   
Sbjct: 324 NARAQLG--DGTQTQRLSPCQVTGLTQVKGVAAGGGL-HSVAVKGNGEVWAWGSNSEGQV 380

Query: 146 GSD-------PSQG---VQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
           G         P+     V+   V        +L   G  + WG N   Q+G     TT  
Sbjct: 381 GDGTYLMKLVPTTARVLVERADVSAGGGHTLALKPDGTAWGWGLNAQSQLG---DGTTTA 437

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSK-------SVSRLYAFGIGSAVQLDSPKSVHKT 248
           +P  V+ L    +A ++ G  HS  L +         +   A G G+A+    P  V  T
Sbjct: 438 RPLPVQVLNLTRVAAVSAGTYHSLALKEDGTVWGWGANYWGAIGDGTALNRSQPVKVSGT 497



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 136/320 (42%), Gaps = 68/320 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+  G V+ WG ++ GQLG +     +++ P RV  L    VV   AG        
Sbjct: 509 HSLALSVDGSVWAWGDNSLGQLG-DGTVTPTRNAPFRVPNLE--GVVSLAAGGE------ 559

Query: 66  STTGLWHSLALNDCGEVFTWG-GDTHGQLGLESADKKSQS----IPKRVKGLASVSVVQA 120
                 HSLAL   G V+ WG  DT        AD ++      +P++V+GL     V+ 
Sbjct: 560 ------HSLALKADGTVWVWGRQDT-------CADPENVGRVLRVPEQVQGLTDAVAVR- 605

Query: 121 CAGYSHCLVLTSSGVV--------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
            AG  H +VL + G +              T T +      D   GV S  V    T   
Sbjct: 606 -AGRCHSVVLRADGTLWAWGRNAEGQLADGTFTDRMTPARVDGLTGVISFSVGSEQT--L 662

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L + G  + WG N  GQ+G    +   T+P +V +L +  +  +A GA H+ VL   ++
Sbjct: 663 ALKADGTAWAWGPNAQGQLG-GGLSVPRTRPTQVPTLTD--VRTVAMGAVHALVLKDDLT 719

Query: 227 RLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
            L+A+G  +  Q+                W A+PV       S ++ S GL     YS G
Sbjct: 720 -LWAWGSNAEGQVGDGAL----------DWQAAPV------RSGLAASRGLAAATQYSLG 762

Query: 287 ---DHSIVTVTKSSDGVLSD 303
              D S+ +   ++ G L D
Sbjct: 763 IALDGSVQSTGANASGQLGD 782



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 98/239 (41%), Gaps = 35/239 (14%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+A+   GEV+ WG ++ GQ+G  +   K   +P   + L   + V A  G        
Sbjct: 359 HSVAVKGNGEVWAWGSNSEGQVGDGTYLMK--LVPTTARVLVERADVSAGGG-------- 408

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 H+LAL   G  + WG +   QLG    D  + + P  V+ L    V    AG  
Sbjct: 409 ------HTLALKPDGTAWGWGLNAQSQLG----DGTTTARPLPVQVLNLTRVAAVSAGTY 458

Query: 126 HCLVLTSSGVVTCTHKEN-GCGSDPSQGVQSNLVQDSHTTIT-----------SLNSPGE 173
           H L L   G V        G   D +   +S  V+ S T +            +L+  G 
Sbjct: 459 HSLALKEDGTVWGWGANYWGAIGDGTALNRSQPVKVSGTLVAMTVASGNFHSLALSVDGS 518

Query: 174 LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           ++ WG+N  GQ+G      T   P RV +L    +  +A G  HS  L K+   ++ +G
Sbjct: 519 VWAWGDNSLGQLGDGTVTPTRNAPFRVPNLEG--VVSLAAGGEHSLAL-KADGTVWVWG 574


>gi|336116892|ref|YP_004571659.1| hypothetical protein MLP_12420 [Microlunatus phosphovorus NM-1]
 gi|334684671|dbj|BAK34256.1| hypothetical protein MLP_12420 [Microlunatus phosphovorus NM-1]
          Length = 508

 Score = 88.2 bits (217), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 137/313 (43%), Gaps = 64/313 (20%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G W SLAL   G V++WG +   QLG       + +IP +V+GL+ V+ V          
Sbjct: 238 GGWTSLALLKDGTVWSWGANDWRQLGAGDTGFNAHTIPVKVEGLSGVTAVD--------- 288

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQAC 121
                 G WHSLAL + G V++WG    GQLG   ++D  + ++   V GL+ V  V   
Sbjct: 289 -----IGGWHSLALREDGTVWSWGHGHQGQLGDGTNSDHNAAAV---VPGLSGVKAV--S 338

Query: 122 AGYSHCLVLTSSGVVTC----THKENGCGSDPSQGV-----------------QSNLVQD 160
           AGY H L L   G V         + G G++ ++                    SN+  D
Sbjct: 339 AGYRHSLALLRDGTVWSWGYNAQGQLGDGTNTNRNTPVKVASLGGRVKAIAASSSNVFHD 398

Query: 161 SHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
              ++  L   G +++WG N++ Q+G + +NT+   P +V  L    +  IA G  HS  
Sbjct: 399 PSFSLALLED-GTVWSWGTNDWHQLG-DGTNTSRNTPVKVSDLSG--VKAIAPGGRHSLA 454

Query: 221 LSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVK 280
           L K    ++ +G     Q+ +      TP        A+PV +       +SH     VK
Sbjct: 455 LLKD-GTVWGWGANDHGQVGTGDG---TPDR-----YAAPVKIEG-----ISH-----VK 495

Query: 281 KIYSGGDHSIVTV 293
            I +GG HSI  +
Sbjct: 496 AIAAGGWHSIAAL 508



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 95/254 (37%), Gaps = 57/254 (22%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL------------ 62
           + + WG + HG+LG  +  ++    P        VS +     +S  L            
Sbjct: 146 QGWVWGQNDHGELGDGTNKRRFAPSPMPYLDQVGVSAIDGGGWFSLALLNDGSVWSWGRN 205

Query: 63  --------------------------VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLE 96
                                     V     G W SLAL   G V++WG +   QLG  
Sbjct: 206 DWAQLGDGTKETRHAPVDVMHLARFGVKAIAAGGWTSLALLKDGTVWSWGANDWRQLGAG 265

Query: 97  SADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV-TCTHKENGCGSDPSQ---- 151
                + +IP +V+GL+ V+ V    G+ H L L   G V +  H   G   D +     
Sbjct: 266 DTGFNAHTIPVKVEGLSGVTAVD-IGGW-HSLALREDGTVWSWGHGHQGQLGDGTNSDHN 323

Query: 152 ---------GVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVES 202
                    GV++  V   +    +L   G +++WG N  GQ+G + +NT    P +V S
Sbjct: 324 AAAVVPGLSGVKA--VSAGYRHSLALLRDGTVWSWGYNAQGQLG-DGTNTNRNTPVKVAS 380

Query: 203 LVNLPIALIACGAN 216
           L     A+ A  +N
Sbjct: 381 LGGRVKAIAASSSN 394


>gi|348528302|ref|XP_003451657.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Oreochromis
           niloticus]
          Length = 531

 Score = 88.2 bits (217), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL D GEV+ WG +  GQ+G  S    +Q  P+RV       V           
Sbjct: 136 GSHHSMALTDTGEVYAWGYNNCGQVG--SGSTANQPTPRRVSSCLQNKV----------- 182

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            ++   G   SLA+ D GEV+ WG + +GQLGL   +  +Q  P R+ GL  + V Q  +
Sbjct: 183 AVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGL--GNNGNQVTPCRLVGLQGLCVQQIVS 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H + LT  G+                                      LY WG N Y
Sbjct: 241 GYAHSMALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N +  ++ P ++ +     + + AC + H+        ++Y +G
Sbjct: 263 GQLGTGNKSNQLS-PVQILTEKERIVEIAACHSTHTSAAKTQSGQVYMWG 311



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 2/82 (2%)

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           GEL+ WG+N Y Q+G   +N  V       +L+N  +  +ACG++HS  L+ +   +YA+
Sbjct: 94  GELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDT-GEVYAW 152

Query: 232 GIGSAVQLDSPKSVHK-TPQLI 252
           G  +  Q+ S  + ++ TP+ +
Sbjct: 153 GYNNCGQVGSGSTANQPTPRRV 174


>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
          Length = 456

 Score = 88.2 bits (217), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 120/250 (48%), Gaps = 32/250 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+L L + G + ++G + +GQLG  +         + +  L++  +  AC       
Sbjct: 52  GGGHTLVLLEDGCLHSFGYNQYGQLGNGTKVDSPLDASRDISSLSNKLIAVAC------- 104

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G +HS AL+  G VFTWGG  +G+LG    D+++++IP R+  L     +    
Sbjct: 105 ------GRYHSAALDVNGTVFTWGGGKNGRLG--HNDEQTRTIPCRITHLPRAHKI--FC 154

Query: 123 GYSHCLVLTSSGVVT---CTHKENGCGS-DPSQGVQSNLVQDSHTTITSL---------- 168
           GY     +T  G+ T     H + G GS + S G +  +  D++  I+ L          
Sbjct: 155 GYHITAAITDDGLYTWGWGEHGQLGQGSLEDSYGPKKVIFDDANLAISQLACGDRHCLVR 214

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
              G++YTWG+NE+GQ+GI   N   + P  + SL  + +  +A G  HS  ++ + S L
Sbjct: 215 TESGDVYTWGSNEFGQLGIGRYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGS-L 273

Query: 229 YAFGIGSAVQ 238
           + +G G+  Q
Sbjct: 274 FTWGCGAEGQ 283



 Score = 42.0 bits (97), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)

Query: 174 LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG- 232
           LYTWG  +  ++G   +     +P+ ++   N  I  +ACG  H+ VL +    L++FG 
Sbjct: 12  LYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGC-LHSFGY 70

Query: 233 -----IGSAVQLDSP 242
                +G+  ++DSP
Sbjct: 71  NQYGQLGNGTKVDSP 85


>gi|426248720|ref|XP_004018107.1| PREDICTED: RCC1 domain-containing protein 1 [Ovis aries]
          Length = 307

 Score = 88.2 bits (217), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 43/234 (18%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+L L+  G+VF+WG   HGQLG  + + + +  P+ ++ L  + + +  AG     
Sbjct: 97  GAEHALLLDAAGQVFSWGAGRHGQLGHGTLEPEPE--PRLLEALQGLRMAEVAAGG---- 150

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   WHS+ L++ G+++ WG +  GQL L +            K LA     +  A
Sbjct: 151 --------WHSVCLSETGDIYIWGWNESGQLALPT------------KSLAEDG--KTTA 188

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGS------------DPSQGVQSNLVQDSHTTITSLNS 170
           G +  L    S V   +  E+G  +            D S G ++  V         L  
Sbjct: 189 GEASGLDEDGSEVKRVSAGEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRHTAVLTR 248

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVN--LPIALIACGANHSFVLS 222
            GELYTWG  +YGQ+G +   TT+ +P RVE  V+  L +  ++CG  +++V +
Sbjct: 249 TGELYTWGWGKYGQLG-HKDTTTLDRPCRVEYFVDKQLQVRTVSCGPWNTYVYA 301


>gi|222632434|gb|EEE64566.1| hypothetical protein OsJ_19418 [Oryza sativa Japonica Group]
          Length = 1002

 Score = 88.2 bits (217), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 109/228 (47%), Gaps = 21/228 (9%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WHS      G++FT+G  T G LG    D++S + PK V+ L+    ++   G  H  
Sbjct: 340 GSWHSALTMSSGKLFTFGDGTFGSLG--HGDRESVAYPKEVEALSGFRAMKVACGVWHSA 397

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +   +G   + A++   ++FTWG     +LG    DK+++ +P  V+ L   +  Q   
Sbjct: 398 AIVEISGQASTNAMSR--KLFTWGDGDKNRLG--HGDKEAKLVPTCVQALVDHNFHQVAC 453

Query: 123 GYSHCLVLTSSG-VVTCTHKENG-CGSDPSQGVQSNLVQDS------------HTTITSL 168
           G+S  + L +SG V T     NG  G+  + G Q  +VQD                + +L
Sbjct: 454 GHSMTVALATSGHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAAL 513

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN 216
            S  E+YTWG    G++G + S     KP  V++L +  +  I+CG+N
Sbjct: 514 TSRSEVYTWGMGANGRLG-HGSVEDKKKPTLVDALKDRHVKSISCGSN 560



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 41/262 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+  +   G+++ WG  ++    L      S  +PKRV G   +  +Q         
Sbjct: 285 GEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSG--PLEGLQ--------- 333

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC 121
           VL+   G WHS      G++FT+G  T G LG    D++S + PK V+ L+    ++ AC
Sbjct: 334 VLSVACGSWHSALTMSSGKLFTFGDGTFGSLG--HGDRESVAYPKEVEALSGFRAMKVAC 391

Query: 122 AGYSHCLVLTSSGVVTCTH-----------KENGCGSDPSQG----------VQSNLVQD 160
             +    ++  SG  +               +N  G    +           V  N  Q 
Sbjct: 392 GVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQV 451

Query: 161 S--HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVE-SLVNLPIALIACGANH 217
           +  H+   +L + G ++T G++  GQ+G  N      +P  V+  L N  +  I+CG+NH
Sbjct: 452 ACGHSMTVALATSGHVFTMGSSNNGQLG--NPKADGKQPCMVQDKLGNELVEEISCGSNH 509

Query: 218 SFVLSKSVSRLYAFGIGSAVQL 239
              L+ S S +Y +G+G+  +L
Sbjct: 510 VAALT-SRSEVYTWGMGANGRL 530



 Score = 46.6 bits (109), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 91/224 (40%), Gaps = 63/224 (28%)

Query: 80  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCT 139
           GEVFTWG +  G+LG  +     +  PK V+ LA  +V     G  H  V+T+SG     
Sbjct: 244 GEVFTWGEELGGRLGHGTDTDICR--PKLVESLAVSNVEYIACGEFHTCVVTASG----- 296

Query: 140 HKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTK--P 197
                                            +LY WG+  Y   G+    T V+   P
Sbjct: 297 ---------------------------------DLYDWGDGSY-NAGLLGHGTGVSHWLP 322

Query: 198 QRVES-LVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS--------PKSVH-- 246
           +RV   L  L +  +ACG+ HS  L+ S  +L+ FG G+   L          PK V   
Sbjct: 323 KRVSGPLEGLQVLSVACGSWHS-ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEAL 381

Query: 247 ---KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGD 287
              +  ++  G W ++ +   +G+ S  + S     +K+++ GD
Sbjct: 382 SGFRAMKVACGVWHSAAIVEISGQASTNAMS-----RKLFTWGD 420


>gi|340503706|gb|EGR30242.1| hypothetical protein IMG5_137170 [Ichthyophthirius multifiliis]
          Length = 274

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 14/151 (9%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQ-TFNPHTLNQYLEVEVSRDNIVE 998
            NYPF  D K K TLLE+D + Q + A        F Q  F   T   +L  EV RD ++E
Sbjct: 10   NYPFCTDVKYKYTLLEVDSKFQKKQAHESRIRDFFDQGQFLLSTSQLFLIFEVGRDTVLE 69

Query: 999  DTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDP 1058
            DT+ ++++   N F+ P KV            KF+GE+  D GG+R+E+  +++K++L+P
Sbjct: 70   DTMEQISRPNLN-FRLPFKV------------KFKGEQGIDEGGLRKEYYQIMIKKLLNP 116

Query: 1059 KYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             +GMF    + R +WF+  +++   +Y LIG
Sbjct: 117  DFGMFLPKNDDRFLWFNGHSYDMPILYELIG 147


>gi|320163936|gb|EFW40835.1| ubiquitin ligase E3A isoform 1 [Capsaspora owczarzaki ATCC 30864]
          Length = 764

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 94/187 (50%), Gaps = 28/187 (14%)

Query: 907  FYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLL-EMDQRIQMEHA 965
            FY   ++   ++R +   W  G   G T    C++PF+  A AK  LL E    IQ +  
Sbjct: 345  FYNDHISEGLELRGNLINWQRG--TGFT---FCHFPFVITATAKYNLLAEESYMIQSKRH 399

Query: 966  MNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIY 1025
             +     +F +  +P     YL V V RD+I+ED + +L+    +  K  L+V       
Sbjct: 400  TDAFFNSIFSEAQDP-----YLRVLVRRDHIIEDVLLQLSHKDPSQLKHRLRV------- 447

Query: 1026 LAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFS---EDTFEDQ 1082
                 +F  EE  D GGV++EF  L+ ++IL PK+GMF+  EETR++WF    +DT   Q
Sbjct: 448  -----RFVDEEGVDEGGVQKEFFQLIFRDILAPKFGMFEYEEETRNMWFRKAIDDTL--Q 500

Query: 1083 NMYFLIG 1089
              Y L+G
Sbjct: 501  GEYVLVG 507



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 67/102 (65%), Gaps = 7/102 (6%)

Query: 720 YGITEYEE-TRSIWFS---EDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILD 775
           +G+ EYEE TR++WF    +DT + + +  L+G L GLAIYN  ++++ FPL +YKK+L 
Sbjct: 477 FGMFEYEEETRNMWFRKAIDDTLQGEYV--LVGLLIGLAIYNRVMLDLHFPLVIYKKLLG 534

Query: 776 EPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
           +P+   DL+   P LA  LQ++L+Y + D+E  F  TF+  Y
Sbjct: 535 KPVTFADLQVAQPALAHGLQELLEY-DGDVEATFCRTFQLSY 575


>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
            anatinus]
          Length = 3053

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 29/237 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  HS  +   G++++WG   +G+LG    D + Q  PK V+ L    V+    G    
Sbjct: 2317 AGGAHSACITVAGDLYSWGKGRYGRLG--HGDSEDQLKPKLVEALQGYRVIDIACG---- 2370

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 2371 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 2422

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
             G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 2423 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 2482

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
                GE+YTWG+N+ GQ+G   +N  + +P+ V +L    I  +ACG+ H+   S S
Sbjct: 2483 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKINRVACGSAHTLAWSTS 2538



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 103/260 (39%), Gaps = 57/260 (21%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 1297 GSSHSAAITSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 1353

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL D G VF+WG    G+LG      +  ++P+ ++ L    V Q   
Sbjct: 1354 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNVPQNIERLNGQGVCQIEC 1402

Query: 123  GYSHCLVLTSSGVV-TCTHKENGCGSDPSQGVQSNLVQDSHTTIT-----------SLNS 170
            G    L LT SGVV T    + G     S  VQS  V D                  L S
Sbjct: 1403 GAQFSLALTKSGVVWTWGRGDFGELRPDSHIVQSGNVSDRMRVRNKGACLIPLPFFGLVS 1462

Query: 171  PGEL------------------------------YTWGNNEYGQMGINNSNTTVTKPQRV 200
            P E+                              Y WG+N++GQ G N + T   KP  V
Sbjct: 1463 PREMGWEIVGIERNSGISSFCGQQGERRERQLEVYAWGDNDHGQQG-NGTTTVNRKPTLV 1521

Query: 201  ESLVNLPIALIACGANHSFV 220
            + L    I  +ACG++HS  
Sbjct: 1522 QGLEGQKITRVACGSSHSVA 1541



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 119/263 (45%), Gaps = 53/263 (20%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   GEVF+WG    G+LG         ++P +  K ++++S  QA     H    
Sbjct: 211 HYLALAATGEVFSWGCGDGGRLG------HGDTVPLEEPKMISALSGKQAGKHVVHI--- 261

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  +S A+   GE++TWG   +G+LG  S++   Q+IP  V GL  + V+      
Sbjct: 262 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DQTIPMLVTGLKGLKVIDVS--- 314

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                               CGS            D+ T   + N  G++++WG+ +YG+
Sbjct: 315 --------------------CGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 341

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +G   S+   T P+ +E L +L I  + CG+  S  L+K   ++Y++G G   +L     
Sbjct: 342 LGRGGSDGCKT-PKLIEKLQDLDIVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 399

Query: 245 VH-KTPQLIHGPWIASPVAMTAG 266
            H + P+L+ G      V + AG
Sbjct: 400 EHVRYPKLLEGLQGKKVVDVAAG 422



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   GE++TWG   +G+LG  S++   Q+IP  V GL  + V+    G     
Sbjct: 264 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DQTIPMLVTGLKGLKVIDVSCG----- 316

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +LA+ + G+V++WG   +G+LG   +D      PK ++ L  + +V+   
Sbjct: 317 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDIVKVRC 369

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G    + LT  G V    K +    G G++         +G+Q   V D     T   +L
Sbjct: 370 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLAL 429

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
               E+++WG+N+  Q   +    T  +P  +  L    I  IACG   SF  S
Sbjct: 430 TEDSEVHSWGSNDQCQH-FDTLRITKPQPSALPGLDTKHIVGIACGPAQSFAWS 482



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 95/223 (42%), Gaps = 53/223 (23%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H++AL   G+VF+WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 1244 SGGRHAMALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 1301

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 1302 AAITSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 1347

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
                                   CGS  +Q +             +L   G +++WG+ +
Sbjct: 1348 -----------------------CGSRDAQTL-------------ALTDEGLVFSWGDGD 1371

Query: 182  YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
            +G++G   S      PQ +E L    +  I CGA  S  L+KS
Sbjct: 1372 FGKLGRGGSEG-CNVPQNIERLNGQGVCQIECGAQFSLALTKS 1413



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/323 (23%), Positives = 129/323 (39%), Gaps = 73/323 (22%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+    G ++ WG +  GQL G+E A  K   +P   + LA++  VQ   G      +T
Sbjct: 2164 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 2220

Query: 66   STTGLW------------------------------------------HSLALNDCGEVF 83
            +   L+                                          H LAL+  GEV+
Sbjct: 2221 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVY 2280

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
            +WG    G+LG    ++     P+ V+ L  + VV   AG +H   +T +G +    K  
Sbjct: 2281 SWGEAEDGKLG--HGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGR 2338

Query: 144  ----GCGSDPSQGVQSNLVQ---------------DSHTTITSLNSPGELYTWGNNEYGQ 184
                G G    Q ++  LV+               D+ T    L     +++WG+ +YG+
Sbjct: 2339 YGRLGHGDSEDQ-LKPKLVEALQGYRVIDIACGSGDAQTLC--LTDDDTVWSWGDGDYGK 2395

Query: 185  MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
            +G   S+     P +++SL  L +  + CG+  S  L+KS + +Y +G G   +L     
Sbjct: 2396 LGRGGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSD 2453

Query: 245  VH-KTPQLIHGPWIASPVAMTAG 266
             H + P+ + G      +A+  G
Sbjct: 2454 DHVRRPRQVQGLQGKKVIAIATG 2476



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 99/228 (43%), Gaps = 40/228 (17%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T         
Sbjct: 1150 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 1200

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
                 G+V+  G  T+G+LGL      +  +P+++  L++  V  V   +G  H + LT 
Sbjct: 1201 -----GKVYACGEATNGRLGL-GISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTV 1254

Query: 133  SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLN------------------SPGEL 174
             G V       G G D   G  S +  D    I +L                   S GEL
Sbjct: 1255 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 1310

Query: 175  YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            YTWG  EYG++G +  NTT  KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 1311 YTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 1357



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 51/217 (23%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+ V+GLAS ++V+  A           +   H LAL   GEVF+WG    G+LG     
Sbjct: 189 PQLVQGLASRNIVKVAA----------HSDGHHYLALAATGEVFSWGCGDGGRLG----- 233

Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
               ++P +  K ++++S  QA     H                  CGS           
Sbjct: 234 -HGDTVPLEEPKMISALSGKQAGKHVVHI----------------ACGS----------- 265

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
               T   ++ + GELYTWG   YG++G + S+   T P  V  L  L +  ++CG+  +
Sbjct: 266 ----TYSAAITAEGELYTWGRGNYGRLG-HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDA 320

Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
             L+ + + +++++G G   +L    S   KTP+LI 
Sbjct: 321 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 357



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 100/236 (42%), Gaps = 36/236 (15%)

Query: 81   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCT 139
            +VF WG +   QLG     K    +P   + L++++VVQ   G      +T  G V  C 
Sbjct: 1150 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 1207

Query: 140  HKENG-CGSDPSQG---------------VQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
               NG  G   S G               V+   V        +L   G++++WG  + G
Sbjct: 1208 EATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDG 1267

Query: 184  QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD--- 240
            ++G + S     KP+ +E+L    I  IACG++HS  ++ S   LY +G+G   +L    
Sbjct: 1268 KLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS-GELYTWGLGEYGRLGHGD 1325

Query: 241  -----SPKSV-----HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
                  PK V     H+  Q+  G   A  +A+T  ++ LV   G     K+  GG
Sbjct: 1326 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT--DEGLVFSWGDGDFGKLGRGG 1379


>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
 gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
          Length = 1152

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 59/285 (20%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LAL   G+V++WG   +G+LG    + ++Q IPK V+G     VV        C +  
Sbjct: 461 HTLALTLDGKVYSWGDGDYGKLG--HGNSQTQKIPKLVEGALGNKVV--------CCI-- 508

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS A+ + GE++TWG   +G+LG    D  S+++P +VK +A+V          
Sbjct: 509 -AAGYRHSAAVTEDGELYTWGEGDYGRLG--HGDNNSRNVPVQVKDVANV---------- 555

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                   G V C      C S           QD  T          ++++G+ + G++
Sbjct: 556 --------GQVACGSAHTVCVS-----------QDGQT----------VWSFGSGDNGKL 586

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
           G +++N  V KP+ +E+L  + I  + CG+  S  L+ S  ++Y +G G ++   S  + 
Sbjct: 587 GHSDTN-RVYKPKVIEALQGMVIRKVCCGSQCSLALT-STGQVYVWGCGPSLGTGSVDAT 644

Query: 246 HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSI 290
             TP+L+      S V ++ G+   V+ +       +Y+ G++S+
Sbjct: 645 SATPKLLLALQSHSVVDISVGDSHCVALTQD---NNVYAWGNNSM 686



 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 111/238 (46%), Gaps = 42/238 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS A+ + GE++TWG   +G+LG    D  S+++P +VK +A+V  V AC G +H 
Sbjct: 510 AGYRHSAAVTEDGELYTWGEGDYGRLG--HGDNNSRNVPVQVKDVANVGQV-AC-GSAHT 565

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + ++            D   V+++G   +G+LG   +D      PK ++ L  + + + C
Sbjct: 566 VCVS-----------QDGQTVWSFGSGDNGKLG--HSDTNRVYKPKVIEALQGMVIRKVC 612

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN----------LVQDSHTTI------ 165
            G    L LTS+G V       GCG  PS G  S           L   SH+ +      
Sbjct: 613 CGSQCSLALTSTGQVYVW----GCG--PSLGTGSVDATSATPKLLLALQSHSVVDISVGD 666

Query: 166 ---TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
               +L     +Y WGNN  GQ G  +  T +TKP++V  L  + +  I+ G +H+  
Sbjct: 667 SHCVALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHTVA 724



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 59/126 (46%), Gaps = 16/126 (12%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           SLAL   G+V+ WG      LG  S D  S + PK +  L S SVV    G SHC+ LT 
Sbjct: 618 SLALTSTGQVYVWGCGP--SLGTGSVDATS-ATPKLLLALQSHSVVDISVGDSHCVALTQ 674

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
                          V+ WG ++ GQ G +       + PK+V GL  V+V Q  AG SH
Sbjct: 675 DN------------NVYAWGNNSMGQCG-QGHCTTPITKPKKVLGLDGVAVHQISAGTSH 721

Query: 127 CLVLTS 132
            +  T+
Sbjct: 722 TVAWTA 727



 Score = 51.2 bits (121), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 30/199 (15%)

Query: 58  YSHCLVLTSTTG--LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASV 115
           Y+ C V +  TG   +H  +     EV+ WG ++  QL   S DK    +PK      S 
Sbjct: 340 YAKCTVKSGITGEVSFHGNSFASNEEVYVWGSNSSHQLAEGSMDKIL--VPKLATSFGSA 397

Query: 116 SVVQACAGYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDS---------- 161
             ++A  G     V+   G V    K +    G G   +Q     L  D+          
Sbjct: 398 QQIEA--GQYCTFVIFPDGFVHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSS 455

Query: 162 -----HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVE-SLVNLPIALIACGA 215
                HT   +L+  G++Y+WG+ +YG++G  NS T    P+ VE +L N  +  IA G 
Sbjct: 456 KGSDGHTLALTLD--GKVYSWGDGDYGKLGHGNSQTQKI-PKLVEGALGNKVVCCIAAGY 512

Query: 216 NHSFVLSKSVSRLYAFGIG 234
            HS  +++    LY +G G
Sbjct: 513 RHSAAVTED-GELYTWGEG 530


>gi|357165462|ref|XP_003580391.1| PREDICTED: uncharacterized protein LOC100842512 [Brachypodium
           distachyon]
          Length = 1023

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 115/235 (48%), Gaps = 25/235 (10%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WH+  +   G++FT+G  T G LG    DK+  + PK V+ L  + V     G  H  
Sbjct: 377 GEWHTAIITSSGQLFTYGDGTFGVLG--HGDKQGIARPKEVESLKGLRVKSVACGPWHTA 434

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +   T  ++  A +  G++FTWG    G+LG   ADKK + +P  V  L S   +Q   
Sbjct: 435 AVVEVTSSFNCNAPS--GKLFTWGDADRGKLG--HADKKIKLVPTCVDLLTSYDFLQVSC 490

Query: 123 GYSHCLVLTSSGVV--TCTHKENGCGSDPSQG---------VQSNLVQD-----SHTTIT 166
           G +  +VLTS+GVV    + K    G+  + G         +++  V++     SH  + 
Sbjct: 491 GAALTVVLTSTGVVFTIGSSKHGQLGNPHADGESICTVEGTLKNEFVREISSGSSHVAVL 550

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
           +L   G+++TWG    GQ+G+ + +   + P  VE+L    +  IACG+N S  +
Sbjct: 551 TLK--GQVFTWGKGADGQLGLGDYDNR-SSPTLVEALQGRHVQSIACGSNFSAAV 602



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 39/231 (16%)

Query: 10  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTG 69
           L+   +VF WG D  G + L+S D   +++P+ V     + V     G +H  ++T    
Sbjct: 226 LDSLNDVFLWG-DVLGSM-LDSEDI-PKALPRLVASTTMLDVQSIACGENHAAIVTKL-- 280

Query: 70  LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 129
                     GEVF+WG ++   LG +  D  S S PK V+ LASV V     G  H   
Sbjct: 281 ----------GEVFSWGNESSRTLGHQIND--SVSCPKLVEALASVHVKAVAFGSKHTCA 328

Query: 130 LTSS-------------GVVTCTHKENGC------GSDPSQGVQSNLVQDSHTTITSLNS 170
           +T S             G+++  ++ N        G   S  V      + HT I  + S
Sbjct: 329 VTVSGELLEWSEGAHRLGLLSNWYERNQWSPHKLFGPMDSISVSKIACGEWHTAI--ITS 386

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
            G+L+T+G+  +G +G +     + +P+ VESL  L +  +ACG  H+  +
Sbjct: 387 SGQLFTYGDGTFGVLG-HGDKQGIARPKEVESLKGLRVKSVACGPWHTAAV 436



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 108/284 (38%), Gaps = 79/284 (27%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH-C 61
           G  H+  +   GEVF+WG ++   LG +  D  S S PK V+ LASV V     G  H C
Sbjct: 270 GENHAAIVTKLGEVFSWGNESSRTLGHQIND--SVSCPKLVEALASVHVKAVAFGSKHTC 327

Query: 62  LVLTS------------------------------------------TTGLWHSLALNDC 79
            V  S                                            G WH+  +   
Sbjct: 328 AVTVSGELLEWSEGAHRLGLLSNWYERNQWSPHKLFGPMDSISVSKIACGEWHTAIITSS 387

Query: 80  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCT 139
           G++FT+G  T G LG    DK+  + PK V+ L  + V     G  H     ++ VV  T
Sbjct: 388 GQLFTYGDGTFGVLG--HGDKQGIARPKEVESLKGLRVKSVACGPWH-----TAAVVEVT 440

Query: 140 HKENGCGSDPSQGVQSNLVQDSHTTITSLNSP-GELYTWGNNEYGQMGINNSNTTVTKPQ 198
              N                         N+P G+L+TWG+ + G++G  +    +  P 
Sbjct: 441 SSFN------------------------CNAPSGKLFTWGDADRGKLGHADKKIKLV-PT 475

Query: 199 RVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
            V+ L +     ++CGA  + VL+ S   ++  G     QL +P
Sbjct: 476 CVDLLTSYDFLQVSCGAALTVVLT-STGVVFTIGSSKHGQLGNP 518


>gi|405345706|ref|ZP_11022499.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
 gi|397093755|gb|EJJ24452.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 747

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 131/266 (49%), Gaps = 43/266 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLA++  G VF WG +  GQLG  +   K  + P +V G+AS   V A   Y    
Sbjct: 58  GQYHSLAVHSEGTVFAWGFNRLGQLGDGTTQDK--AAPVQVAGVASAVSVAAGDQY---- 111

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     SLAL++ G+V+ WG +  GQLG  +   ++Q  P+RV GL     V   +
Sbjct: 112 ----------SLALDENGDVWAWGDNASGQLGDGTLTPRAQ--PRRVSGL--TQGVSLAS 157

Query: 123 GYSHCLVLTSSGVVTC--THKENGCGSD---------PSQGVQSNLVQ--DSHTTITSLN 169
           G++H + L + G V     ++ N  GS          P  G+ S++V      ++  +L 
Sbjct: 158 GFAHAVALRADGTVWAWGDNRSNQLGSATLTRSPVPIPVPGL-SDIVAVVAGGSSSLALR 216

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTK--PQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           + G ++ WG+N YGQ+G     TTV +  P RV +L    +  I+ GA H+  L ++   
Sbjct: 217 ADGTVWAWGDNRYGQLG---DGTTVRRAAPVRVANLD--AVTHISAGAYHALAL-RADGT 270

Query: 228 LYAFGIGSAVQLDSPKSVHKT-PQLI 252
            +A+G  +  QL    +V +T P LI
Sbjct: 271 AWAWGYNAFGQLGDGTTVQRTLPVLI 296



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 81/248 (32%), Positives = 115/248 (46%), Gaps = 44/248 (17%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           + G  HS+AL   G  ++WG +  GQLG  +   +    P +V GLA   + +A A    
Sbjct: 354 VAGFRHSVALGADGTAWSWGDNVFGQLGDTTFQPRM--APVQVTGLA---LGRADA---- 404

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                 T+G  H++ L   G ++ WG +  GQLG  +    S  +P  + G+ SVS    
Sbjct: 405 ------TSGQLHTVMLGANGRLWAWGDNNQGQLGNGTQQNSSLPLPVNLTGITSVS---- 454

Query: 121 CAGYSHCLVLTSSGVV----TCTHKENGCG-----SDPSQ-----GVQSNLVQDSHTTIT 166
            +G+ H   L   G V    T  + + G G     S P Q     GV S    D H+   
Sbjct: 455 -SGHRHTAALRLDGTVWSWGTNQYGQLGDGTRTDRSTPVQVPGLTGVTSIATGDYHS--L 511

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTV--TKPQRVESLVNLPIALIACGANHSFVLSKS 224
           +L S G ++ WG N YGQ+G     TTV  T+P +V  L N  I  IA G  HS  L +S
Sbjct: 512 ALRSNGTVWGWGFNRYGQLG---DGTTVDRTQPVQVSGLTN--IVSIAAGGGHSLAL-RS 565

Query: 225 VSRLYAFG 232
              ++AFG
Sbjct: 566 DGTVWAFG 573



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 105/423 (24%), Positives = 171/423 (40%), Gaps = 74/423 (17%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           + G +HSLA+   G V+ WG + + QLG  + +  S ++P        V++V   AG+ H
Sbjct: 305 VAGNYHSLAVRTDGAVWAWGDNRYRQLG--TGNLTSSAVPLHAGMTGGVTLV---AGFRH 359

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                       S+AL   G  ++WG +  GQLG  +   +    P +V GLA +    A
Sbjct: 360 ------------SVALGADGTAWSWGDNVFGQLGDTTFQPR--MAPVQVTGLA-LGRADA 404

Query: 121 CAGYSHCLVLTSSGVVTCTHKEN----GCGSDPSQ---------GVQSNLVQDSHTTITS 167
            +G  H ++L ++G +      N    G G+  +          G+ S  V   H    +
Sbjct: 405 TSGQLHTVMLGANGRLWAWGDNNQGQLGNGTQQNSSLPLPVNLTGITS--VSSGHRHTAA 462

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L   G +++WG N+YGQ+G + + T  + P +V  L    +  IA G  HS  L +S   
Sbjct: 463 LRLDGTVWSWGTNQYGQLG-DGTRTDRSTPVQVPGLTG--VTSIATGDYHSLAL-RSNGT 518

Query: 228 LYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGD 287
           ++ +G     QL    +V +T           PV ++ G  ++VS         I +GG 
Sbjct: 519 VWGWGFNRYGQLGDGTTVDRT----------QPVQVS-GLTNIVS---------IAAGGG 558

Query: 288 HSIVTVTKSS--------DGVLSDDFRVLN--PATQILDVNFERLKECEREVEQLKSDET 337
           HS+   +  +        DG L +  R     P   +   N   L   +     L++D T
Sbjct: 559 HSLALRSDGTVWAFGYNFDGQLGNGTRTWTILPVQAVGLGNVVSLAAGKMYSLALRADGT 618

Query: 338 LDQDLLLYLETVFLSPGCMNGSF--LQVENDEHF-SCNSKKFSFIKLSLINWFMKLHFSI 394
           +      Y  +  L  G   GS   LQV       S  +  +  + L    W     F+ 
Sbjct: 619 VWA--WGYNASGQLGVGTTQGSAVPLQVSGLSAITSITAGTYHSLALRSDGWVWAWGFNF 676

Query: 395 FGQ 397
            GQ
Sbjct: 677 EGQ 679



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 118/258 (45%), Gaps = 36/258 (13%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           TG +HSLAL   G V+ WG + +GQLG  +   ++Q  P +V GL ++  + A  G    
Sbjct: 505 TGDYHSLALRSNGTVWGWGFNRYGQLGDGTTVDRTQ--PVQVSGLTNIVSIAAGGG---- 558

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                     HSLAL   G V+ +G +  GQLG  +  +    +P +  GL   +VV   
Sbjct: 559 ----------HSLALRSDGTVWAFGYNFDGQLG--NGTRTWTILPVQAVGLG--NVVSLA 604

Query: 122 AGYSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQSNLVQDSHTTITS----------LN 169
           AG  + L L + G V    +  +G  G   +QG    L     + ITS          L 
Sbjct: 605 AGKMYSLALRADGTVWAWGYNASGQLGVGTTQGSAVPLQVSGLSAITSITAGTYHSLALR 664

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           S G ++ WG N  GQ+G   S+  +T P  V S+ N     I  G  HS  + ++   L+
Sbjct: 665 SDGWVWAWGFNFEGQLGNGTSDNRLT-PGLVVSMSN--ATAIFAGDLHSLAV-RADGTLW 720

Query: 230 AFGIGSAVQLDSPKSVHK 247
           A+G+ S  QL +  +V  
Sbjct: 721 AWGLNSHGQLGTGDTVEA 738



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 90/200 (45%), Gaps = 33/200 (16%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  H++AL   G V+ WG +   QLG  SA      +P  V GL+   +V   AG S  
Sbjct: 157 SGFAHAVALRADGTVWAWGDNRSNQLG--SATLTRSPVPIPVPGLS--DIVAVVAGGS-- 210

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      SLAL   G V+ WG + +GQLG  +  ++  + P RV  L +V+ +   
Sbjct: 211 ----------SSLALRADGTVWAWGDNRYGQLGDGTTVRR--AAPVRVANLDAVTHI--S 256

Query: 122 AGYSHCLVLTSSGVV-TCTHKENGCGSDPSQGVQSNL-----VQDSHTTIT------SLN 169
           AG  H L L + G      +   G   D +  VQ  L     + ++ T +       ++ 
Sbjct: 257 AGAYHALALRADGTAWAWGYNAFGQLGDGTT-VQRTLPVLIGLTETRTVVAGNYHSLAVR 315

Query: 170 SPGELYTWGNNEYGQMGINN 189
           + G ++ WG+N Y Q+G  N
Sbjct: 316 TDGAVWAWGDNRYRQLGTGN 335



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 44/145 (30%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +SLAL   G V+ WG +  GQLG+ +   +  ++P +V GL++++ +   AG  H L L 
Sbjct: 609 YSLALRADGTVWAWGYNASGQLGVGT--TQGSAVPLQVSGLSAITSI--TAGTYHSLALR 664

Query: 66  STTGLW--------------------------------------HSLALNDCGEVFTWGG 87
           S   +W                                      HSLA+   G ++ WG 
Sbjct: 665 SDGWVWAWGFNFEGQLGNGTSDNRLTPGLVVSMSNATAIFAGDLHSLAVRADGTLWAWGL 724

Query: 88  DTHGQLGLESADKKSQSIPKRVKGL 112
           ++HGQLG  + D      P +V+GL
Sbjct: 725 NSHGQLG--TGDTVEAWFPVQVQGL 747


>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 1859

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 103/238 (43%), Gaps = 59/238 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKS---QSIPKRVKGLASVSVVQACAGYS 59
           G ++S AL + G+V+ WG  +     L +    S   Q +P +V+ L+ V +V       
Sbjct: 632 GSYYSAALTENGDVYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESLSEVVLV------- 684

Query: 60  HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ 119
                  + G +HS AL   GE+ TWG    GQLG    D  +Q+IPK V+ + S  V Q
Sbjct: 685 -------SIGYYHSAALKSNGELLTWGCGEDGQLG--HGDVLNQTIPKVVQTMTSHWVTQ 735

Query: 120 ACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGN 179
              G  H + LT +G V                                      +TWG 
Sbjct: 736 VQCGEKHTICLTKNGKV--------------------------------------FTWGT 757

Query: 180 NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
           +EYGQ+G+ ++    T P  V SL    I  IACG+ H  VL+ +   +  FG G+A+
Sbjct: 758 SEYGQLGLGDTQKNCT-PMLVTSLEKYNIIQIACGSTHCAVLT-NAREVLVFGNGAAM 813



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 101/255 (39%), Gaps = 82/255 (32%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++ L   G+VFTWG   +GQLGL   D +    P  V  L   +++Q   G +HC 
Sbjct: 739 GEKHTICLTKNGKVFTWGTSEYGQLGL--GDTQKNCTPMLVTSLEKYNIIQIACGSTHCA 796

Query: 63  VLTS------------------------------------TTGLWHSLALNDCGEVFTWG 86
           VLT+                                    + G + + AL +CG+V+TWG
Sbjct: 797 VLTNAREVLVFGNGAAMGSANIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWG 856

Query: 87  GDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCG 146
               GQ  L     +S+  PK V GL S S+ Q   G  H   LT SG            
Sbjct: 857 S---GQ-ELGHGTNQSELHPKLVDGLRSQSIRQISCGGRHMAFLTDSG------------ 900

Query: 147 SDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNL 206
                                     ++YT G + +GQ+G  ++     KP++++SL+  
Sbjct: 901 --------------------------KIYTCGKDPFGQLG--HAQGDQNKPKKIDSLLKT 932

Query: 207 PIALIACGANHSFVL 221
               ++CG NH+  L
Sbjct: 933 TFISVSCGENHNASL 947


>gi|297673949|ref|XP_002815015.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Pongo
           abelii]
          Length = 886

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 1/96 (1%)

Query: 719 HYGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            YG+  Y E  S +WF      ++   FL G LCGL+++N  + N+PFPLALYKK+LD+ 
Sbjct: 598 EYGMFMYPEMGSCMWFPAKPKLEKKRYFLFGMLCGLSLFNLNVANLPFPLALYKKLLDQK 657

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
             L+DLK+LSP L KSLQ++L+    D+ D   I F
Sbjct: 658 PSLEDLKELSPRLGKSLQEVLNDDADDIGDALCIRF 693



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 25/216 (11%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSL L     V + G ++ GQLG   A +    +P+ ++ L ++            
Sbjct: 30  SGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRG--ELPEPIQALETL------------ 75

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           +V   + G  HSLA+   G VF WG  + GQLG+    K+    PK++  L  + ++Q  
Sbjct: 76  IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKITTLNGIKIIQVS 134

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G+ H L L+       ++K    G+  + GV        HT +  L   G+++T+G+N 
Sbjct: 135 CGHCHSLALSK----VQSNKPLSIGALKNLGVVYISCGAEHTAV--LTQDGKVFTFGDNR 188

Query: 182 YGQMGINNSNTTVTK-PQRVESLVNLPIALIACGAN 216
            GQ+G   S T   K PQ VE +  L ++ I CG N
Sbjct: 189 SGQLGY--SPTPEKKGPQLVERIDGL-VSQIDCGRN 221



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 19/155 (12%)

Query: 940  NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLF-----LQTFNPHTLNQYLEVEVSRD 994
            ++PFIF++ +K  LL+ D  I+M+  M++   Y+      LQ  +    +    + V R 
Sbjct: 488  DFPFIFNSLSKIKLLQADSCIKMQ--MSEEKAYMLMHETILQKKDEFPPSPRFILRVRRS 545

Query: 995  NIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKE 1054
             +V+D +R+L+Q    DF K L             V+F  E   ++GGV  EF   + +E
Sbjct: 546  RLVKDALRQLSQAEATDFCKVL------------VVEFINEIRPESGGVSSEFFHCMFEE 593

Query: 1055 ILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +  P+YGMF   E    +WF      ++  YFL G
Sbjct: 594  MTKPEYGMFMYPEMGSCMWFPAKPKLEKKRYFLFG 628



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 139/350 (39%), Gaps = 67/350 (19%)

Query: 17  FTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLAL 76
           F WG D+             +   +R  G  +  ++QA +G  H L+L +          
Sbjct: 3   FCWGADSR------------ELQRRRTAGSPAAELLQAASGERHSLLLLTN--------- 41

Query: 77  NDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV 136
                V + G ++ GQLG   A +    +P+ ++ L ++ V     G  H L +   G V
Sbjct: 42  ---HRVLSCGDNSRGQLGRRGAQRGE--LPEPIQALETLIVDLVSCGKEHSLAVCHKGRV 96

Query: 137 TCTHKENGCGSDPSQGV-QSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                  G GS+   G+ +   +  +   IT+LN    +     + +    +  S     
Sbjct: 97  FAW----GAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHCHS---LALSKVQSN 149

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKSVHKTPQLIHG 254
           KP  + +L NL +  I+CGA H+ VL++   +++ FG   + QL  SP    K PQL+  
Sbjct: 150 KPLSIGALKNLGVVYISCGAEHTAVLTQD-GKVFTFGDNRSGQLGYSPTPEKKGPQLVER 208

Query: 255 PWIASPVAMTAGEDSLVSH--SGGLVVKKIYSGGDHSIVTVTKSSDGVLSDDFRVLNPAT 312
                        D LVS    G  V+K ++   D S    T +    L +  R+    +
Sbjct: 209 I------------DGLVSQIDCGRNVLKLMFKLDDTS---STHAPGKTLPEISRI----S 249

Query: 313 QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSFLQ 362
           Q +   +  +K    E E  KS+          +  +F SP C+  SF +
Sbjct: 250 QSMAEKWIAVKRRSTEHEVAKSE----------IRMIFSSPACLTASFFK 289


>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
 gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
          Length = 5062

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 106/234 (45%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A++  GE++TWG   +G+LG    D  +Q  PK V  L    V+Q   G     
Sbjct: 3192 GSSHSAAISSQGELYTWGLGEYGRLG--HGDNATQLKPKLVTALHGRRVIQVACGSRDA- 3248

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +LAL + G VF+WG    G+LG      +  + P  ++ L+ + V+Q   
Sbjct: 3249 ---------QTLALTEDGAVFSWGDGDFGKLG--RGGSEGSATPHEIERLSGIGVIQIEC 3297

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-------PSQGVQSNLVQDSHTTITSLN-- 169
            G    L LT +G V    K +    G G D       P  G++   V   H  + +L+  
Sbjct: 3298 GAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRV--IHVAVGALHCL 3355

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G  N+     KP  V  L  + +  +ACG++HS  
Sbjct: 3356 AVTDAGQVYAWGDNDHGQQGSGNTFVN-KKPALVIGLDAVFVNRVACGSSHSMA 3408



 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 29/236 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   G V TWG   +G+LG    D + Q  PK V+ L     +    G     
Sbjct: 4346 GSAHSAAITASGHVLTWGKGRYGRLG--HGDSEDQLRPKLVEALLGYRAIDIACG----- 4398

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L + D   V++WG   +G+LG   +D     +P +++ LA + V++   
Sbjct: 4399 -----SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD--GCKLPYKIESLAGLGVIKVEC 4451

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGS-----DPS-----QGVQSNLVQDSHTTITSL 168
            G    + LT SG V    K +    G GS      P      QG +   +        + 
Sbjct: 4452 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVAC 4511

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
            +  GE+YTWG+N+ GQ+G + + T + +P+ V +L    I  + CG+ H+  LS S
Sbjct: 4512 SDAGEVYTWGDNDEGQLG-DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4566



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 109/254 (42%), Gaps = 55/254 (21%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+LAL   G+VF+WG    G+LG    ++ +   P+ V+ L +  +     G S  
Sbjct: 3139 SGGKHALALTLDGKVFSWGEGEDGKLG--HGNRSTLDKPRLVEALRAKKIRDIACGSS-- 3194

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      HS A++  GE++TWG   +G+LG    D  +Q  PK V  L    V+Q  
Sbjct: 3195 ----------HSAAISSQGELYTWGLGEYGRLG--HGDNATQLKPKLVTALHGRRVIQV- 3241

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
                                   CGS  +Q +             +L   G +++WG+ +
Sbjct: 3242 ----------------------ACGSRDAQTL-------------ALTEDGAVFSWGDGD 3266

Query: 182  YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
            +G++G   S  + T P  +E L  + +  I CGA  S  L+++   ++ +G G   +L  
Sbjct: 3267 FGKLGRGGSEGSAT-PHEIERLSGIGVIQIECGAQFSLALTRA-GEVWTWGKGDYYRLGH 3324

Query: 242  PKSVH-KTPQLIHG 254
                H + PQ I G
Sbjct: 3325 GGDQHVRKPQPIAG 3338



 Score = 60.8 bits (146), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 117/308 (37%), Gaps = 78/308 (25%)

Query: 7    SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+      ++ WG +  GQL GLE +  K+   P   + L+ +  +Q   G      +T
Sbjct: 4192 ALSWGGASTIYGWGHNHRGQLGGLEGSRIKT---PTPCEALSLLRPIQLAGGEQSLFAVT 4248

Query: 66   S------------------------------------------TTGLWHSLALNDCGEVF 83
                                                        +G  H LAL   GEV+
Sbjct: 4249 PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVY 4308

Query: 84   TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
             WG    G+LG    ++ S   PK ++ L  +SV     G +H   +T+SG V    K  
Sbjct: 4309 AWGEGEDGKLG--HGNRMSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGR 4366

Query: 144  ----GCGSDPSQGVQSNLVQ---------------DSHTTITSLNSPGELYTWGNNEYGQ 184
                G G    Q ++  LV+               D+ T   + +    +++WG+ +YG+
Sbjct: 4367 YGRLGHGDSEDQ-LRPKLVEALLGYRAIDIACGSGDAQTLCITDDD--NVWSWGDGDYGK 4423

Query: 185  MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS-------RLYAFGIGSAV 237
            +G   S+     P ++ESL  L +  + CG+  S  L+KS +         +  G GS  
Sbjct: 4424 LGRGGSD-GCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4482

Query: 238  QLDSPKSV 245
             +  PK V
Sbjct: 4483 HVRRPKKV 4490



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 53/209 (25%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+V+  G  T+G+LGL      +  +P ++  L    VV+  A +S         G  H+
Sbjct: 3097 GKVYACGEGTNGRLGL--GVTHNVPLPHQLPVLHQY-VVKKVAVHS---------GGKHA 3144

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL   G+VF+WG    G+LG    ++ +   P+ V+ L +  +                
Sbjct: 3145 LALTLDGKVFSWGEGEDGKLG--HGNRSTLDKPRLVEALRAKKI---------------- 3186

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                   ++  CGS             SH+   +++S GELYTWG  EYG++G +  N T
Sbjct: 3187 -------RDIACGS-------------SHSA--AISSQGELYTWGLGEYGRLG-HGDNAT 3223

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLS 222
              KP+ V +L    +  +ACG+  +  L+
Sbjct: 3224 QLKPKLVTALHGRRVIQVACGSRDAQTLA 3252



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 33/239 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S A+   G ++TWG  T+G+LG  ++D   Q +P  V  L    V+    G     
Sbjct: 676 GCSYSAAITLRGNLYTWGRGTYGRLGHGNSD--DQCMPAMVMALKDHQVLDVALG----- 728

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G  H+L L   G V+ WG   +G+LG  S +   Q  P  ++ L  V  V A +
Sbjct: 729 -----SGDAHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSLQ--PLLIECLPRVQRVFAGS 781

Query: 123 GYSHCLV----LTSSGVVTCTHKE------NGCGSDPSQGVQSNLVQDSHTTIT-----S 167
            +S  L     L S G  +C   +       GC S P         +  H  +      +
Sbjct: 782 QFSLALTCEGQLYSWGKASCLGHQLVERNVQGC-SVPRLITSLQHKRIVHVAVGVAHCLA 840

Query: 168 LNSPGELYTWGNNEYGQMGINN--SNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
           L+S GE++ WG N+  Q+   +  S   + +P +V +L  +P + +AC A  S + +++
Sbjct: 841 LSSNGEIFGWGRNDNQQICPASVCSEPLLRQPIQV-TLPTMPASGMACTAVQSLIWTQT 898



 Score = 44.3 bits (103), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 6/68 (8%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYS 59
            TG  H +A +D GEV+TWG +  GQLG    D    +I  P+ V  L    +V+   G +
Sbjct: 4503 TGSLHCVACSDAGEVYTWGDNDEGQLG----DGTVTAIQRPRLVAALQGKHIVKVTCGSA 4558

Query: 60   HCLVLTST 67
            H L L+++
Sbjct: 4559 HTLALSTS 4566


>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
           [Brachypodium distachyon]
          Length = 940

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 115/242 (47%), Gaps = 27/242 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WH+  ++  G++FT+G  T G LG    D  S + PK V+ L  + V     G  H  
Sbjct: 318 GQWHTAIISSSGQLFTYGDGTFGVLG--HGDTSSVARPKEVESLKGLRVKAVACGPWHTA 375

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +    G   S A +  G++FTWG    G+LG   +DK+S+ +P  VK L      Q   
Sbjct: 376 AIVEILGTVKSNAPS--GKLFTWGDADRGKLG--HSDKESKLVPTCVKALTDSDFAQVSC 431

Query: 123 GYSHCLVLTSSGVV-TCTHKENG------------C---GSDPSQGVQSNLVQDSHTTIT 166
             +  + LT +GVV T   KE+G            C   G   ++ V+      SH  + 
Sbjct: 432 AKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSICSVEGPLKTEFVREISSGSSHVAVL 491

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV--LSKS 224
           ++N  G+++TWG    GQ+G+ N     + P  VE+L +  +  IACG+N +    L +S
Sbjct: 492 TMN--GKVFTWGKGTEGQLGLGN-YVDRSSPTLVEALEDKQVDSIACGSNFTVAVCLHRS 548

Query: 225 VS 226
           +S
Sbjct: 549 IS 550



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 58/222 (26%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYSH 60
           G  H+  +   GEVF+WG +  G+LG     K S  +  PK ++ LA          ++H
Sbjct: 211 GEKHAAIVTKQGEVFSWGKEDGGRLG----HKVSVGVLHPKIIESLA----------FTH 256

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQ 119
              +    G  H+ AL   GE+F WG  TH     +   ++SQ  P ++ G L  VSVV+
Sbjct: 257 VKAI--AFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVK 314

Query: 120 ACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGN 179
              G  H  +++SS                                      G+L+T+G+
Sbjct: 315 MACGQWHTAIISSS--------------------------------------GQLFTYGD 336

Query: 180 NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
             +G +G +   ++V +P+ VESL  L +  +ACG  H+  +
Sbjct: 337 GTFGVLG-HGDTSSVARPKEVESLKGLRVKAVACGPWHTAAI 377



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 46/222 (20%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQ-ACAGYSH 60
           G  H+ AL   GE+F WG  TH     +   ++SQ  P ++ G L  VSVV+ AC     
Sbjct: 263 GAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMAC----- 317

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                   G WH+  ++  G++FT+G  T G LG    D  S + PK V+ L  + V   
Sbjct: 318 --------GQWHTAIISSSGQLFTYGDGTFGVLG--HGDTSSVARPKEVESLKGLRVKAV 367

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
             G  H   +     +  T K N     PS                     G+L+TWG+ 
Sbjct: 368 ACGPWHTAAIVE---ILGTVKSNA----PS---------------------GKLFTWGDA 399

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
           + G++G ++  + +  P  V++L +   A ++C    +  L+
Sbjct: 400 DRGKLGHSDKESKLV-PTCVKALTDSDFAQVSCAKALTVALT 440


>gi|408794586|ref|ZP_11206191.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
           meyeri serovar Hardjo str. Went 5]
 gi|408461821|gb|EKJ85551.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
           meyeri serovar Hardjo str. Went 5]
          Length = 364

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 81/277 (29%), Positives = 132/277 (47%), Gaps = 59/277 (21%)

Query: 14  GEVFTWGGDTHGQL--GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLW 71
           G ++TWG +  GQL  G  + D  + +I K    L++++ V +  G++            
Sbjct: 3   GSLYTWGRNNFGQLGSGTSTGDLTNPTITK----LSTIANVVSL-GFNQN---------- 47

Query: 72  HSLALNDCGEVFTWGGDTHGQLGL--------ESADKKSQSIPKRVKGLASVSVVQACAG 123
           +SLA+ + G V+TWG ++ GQLG+         + D   ++ P++V G+   + V    G
Sbjct: 48  NSLAITEDGSVWTWGANSSGQLGMGNTGDLQTAATDAGPRNPPRKVPGI--TNAVMGVYG 105

Query: 124 YSHCLVLTSSGVV------TCTHKENGCG------SDPSQ--GVQSNLVQ----DSHTTI 165
           Y H +VL S G V      +     NG G      S P    G+ ++++Q      H+  
Sbjct: 106 YDHAVVLKSDGTVVSFGLNSVGQLGNGAGGTGTYSSSPVAVIGLPNDVIQVIAGSEHS-- 163

Query: 166 TSLNSPGELYTWGNNEYGQMG---INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            +L   G++Y WG ++YG +G   I  S    + P++V SL    I  IA G +H   L 
Sbjct: 164 AALTKSGDVYVWGRDQYGNLGDGVIGTSTEVNSTPKKVPSLSG--IVHIANGRDHILAL- 220

Query: 223 KSVSRLYAFGIGSAVQL-----DSPKSVHKTPQLIHG 254
           K+   +YA+G+ S+ QL      SP  V  TP L+ G
Sbjct: 221 KTDGTVYAWGLASSGQLGIGGTGSPAPV-PTPTLVTG 256



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 75/299 (25%), Positives = 121/299 (40%), Gaps = 82/299 (27%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGL--------ESADKKSQSIPKRVKGLASVSVVQACAG 57
           +SLA+ + G V+TWG ++ GQLG+         + D   ++ P++V G+ +   V    G
Sbjct: 48  NSLAITEDGSVWTWGANSSGQLGMGNTGDLQTAATDAGPRNPPRKVPGITNA--VMGVYG 105

Query: 58  YSHCLVLTST--------------------TGLW----------------------HSLA 75
           Y H +VL S                     TG +                      HS A
Sbjct: 106 YDHAVVLKSDGTVVSFGLNSVGQLGNGAGGTGTYSSSPVAVIGLPNDVIQVIAGSEHSAA 165

Query: 76  LNDCGEVFTWGGDTHGQL--GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
           L   G+V+ WG D +G L  G+     +  S PK+V  L+   +V    G  H L L + 
Sbjct: 166 LTKSGDVYVWGRDQYGNLGDGVIGTSTEVNSTPKKVPSLS--GIVHIANGRDHILALKTD 223

Query: 134 GVV----TCTHKENGCG--SDPSQGVQSNLVQDSHTTIT---------SLNSPGELYTWG 178
           G V      +  + G G    P+      LV   +  ++         ++ S G +  WG
Sbjct: 224 GTVYAWGLASSGQLGIGGTGSPAPVPTPTLVTGLYNVVSVWANGTQSFAILSDGTVKGWG 283

Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIAL-----IACGANHSFVLSKSVSRLYAFG 232
            N  G +G     T +T P ++ +  ++ + +       CGA H+F + KS S LY +G
Sbjct: 284 ANSSGNLG-----TGLTTPAKLYTPGDIVVGVRDIQYFGCGALHNFAILKSGS-LYGWG 336


>gi|296475513|tpg|DAA17628.1| TPA: CG6678-like [Bos taurus]
          Length = 377

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 43/234 (18%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+L L+  G+VF+WG   HGQLG  + + + +  P+ ++ L  + + +  AG     
Sbjct: 167 GAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPE--PRLLEALQGLRMAEVAAGG---- 220

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   WHS+ L++ G+++ WG +  GQL L +            K LA     +  A
Sbjct: 221 --------WHSVCLSETGDIYIWGWNESGQLALPT------------KSLAEDG--KTTA 258

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGS------------DPSQGVQSNLVQDSHTTITSLNS 170
           G +  L    S V   +  E+G  +            D S G ++  V         L  
Sbjct: 259 GEASGLEEDGSEVKRGSAGEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRHTAVLTR 318

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVN--LPIALIACGANHSFVLS 222
            GELYTWG  +YGQ+G +   TT+ +P RVE  V+  L +  ++CG  +++V +
Sbjct: 319 TGELYTWGWGKYGQLG-HKDTTTLDRPCRVEYFVDKQLQVRTVSCGPWNTYVYA 371


>gi|329664574|ref|NP_001192921.1| RCC1 domain-containing protein 1 [Bos taurus]
          Length = 377

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 43/234 (18%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+L L+  G+VF+WG   HGQLG  + + + +  P+ ++ L  + + +  AG     
Sbjct: 167 GAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPE--PRLLEALQGLRMAEVAAGG---- 220

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   WHS+ L++ G+++ WG +  GQL L +            K LA     +  A
Sbjct: 221 --------WHSVCLSETGDIYIWGWNESGQLALPT------------KSLAEDG--KTTA 258

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGS------------DPSQGVQSNLVQDSHTTITSLNS 170
           G +  L    S V   +  E+G  +            D S G ++  V         L  
Sbjct: 259 GEASGLEEDGSEVKRGSAGEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRHTAVLTR 318

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVN--LPIALIACGANHSFVLS 222
            GELYTWG  +YGQ+G +   TT+ +P RVE  V+  L +  ++CG  +++V +
Sbjct: 319 TGELYTWGWGKYGQLG-HKDTTTLDRPCRVEYFVDKQLQVRTVSCGPWNTYVYA 371


>gi|403367220|gb|EJY83424.1| HECT E3 ubiquitin ligase, putative [Oxytricha trifallax]
          Length = 792

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 23/200 (11%)

Query: 900  RKVAYTAFYMPDLATVCDIRIDYFRWISGR-----PNGSTRDFLCNYPF---IFDAKAKT 951
            +++ +  FY   +    ++   Y  W+  +     PN S  +   N+ +   I D +AK+
Sbjct: 347  KQINFKEFYNEAINFNINLGEQYEEWLVQKSQYKDPNESFVNINSNFIYFQWILDTQAKS 406

Query: 952  TLLEMDQRIQMEHAMNQTNFY-LFLQTFNPHTLN-QYLEVEVSRDNIVEDTIRELAQYTT 1009
             +L +D R +M+  +N+     + +  FN    N  YL ++V R+ I+EDT+  L +   
Sbjct: 407  DILMIDSRCKMDQEINKELINNVVVNLFNQLDQNFAYLYLKVHREQIIEDTLNSLIREDV 466

Query: 1010 NDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEET 1069
            N F+ PL+V            KF  E   D GGV++EF  LL++++ D +Y MFK +E+T
Sbjct: 467  N-FRMPLRV------------KFIDELGVDEGGVQKEFFQLLIRQLFDQQYNMFKYHEDT 513

Query: 1070 RSIWFSEDTFEDQNMYFLIG 1089
            R  WF+ +TFE    + L+G
Sbjct: 514  RLFWFNGNTFESNVKFELMG 533



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 61/106 (57%), Gaps = 12/106 (11%)

Query: 719 HYGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            Y + +Y E+TR  WF+ +TFE      L+G L GLAIYN  I+++  P+A YKK+LD  
Sbjct: 503 QYNMFKYHEDTRLFWFNGNTFESNVKFELMGILMGLAIYNSNILDLHLPMACYKKLLDIQ 562

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLE-----------DVFGIT 812
             +QDL +L+P + +S+  IL   + DLE           DVFG T
Sbjct: 563 PTVQDLIELNPQVGQSIMHILKSEDQDLESKLYQNFTVELDVFGET 608


>gi|405976811|gb|EKC41295.1| Ubiquitin-protein ligase E3A [Crassostrea gigas]
          Length = 602

 Score = 87.8 bits (216), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/99 (45%), Positives = 63/99 (63%), Gaps = 1/99 (1%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           +G+  Y E TR  WF+  +FE+     LIG + GLAIYN TI+++ FP  +Y+K++ +  
Sbjct: 313 FGMFTYNEHTRQFWFNPTSFENDGQFTLIGIVLGLAIYNSTIVDIHFPSVVYRKLMGKKG 372

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
             +DLKDL PTL  SLQ +L+Y   DLEDVF   F+  Y
Sbjct: 373 RFEDLKDLDPTLYASLQQMLEYEGEDLEDVFMQPFKIGY 411



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 24/191 (12%)

Query: 902  VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQ 961
            V Y  F    L    DI  DY   +  + +        N+ FI    +K T + +D R++
Sbjct: 173  VPYDEFVNELLNEYVDIEADYKNKMENKFS------FMNHSFILTTASKHTCMYIDNRVR 226

Query: 962  MEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIREL---AQYTTNDFKKPLKV 1018
            M +    +     ++   P     +L + V RD++++D +  L   A     D KK L V
Sbjct: 227  MYNERRSSILNTLVRGLPPIP---FLRLRVRRDHLIDDALVNLEMTAMDNPQDLKKQLIV 283

Query: 1019 NDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDT 1078
                        +F GE A D GGV +EF  L+++EI +P +GMF   E TR  WF+  +
Sbjct: 284  ------------EFEGEHAMDEGGVSKEFFQLVVEEIFNPDFGMFTYNEHTRQFWFNPTS 331

Query: 1079 FEDQNMYFLIG 1089
            FE+   + LIG
Sbjct: 332  FENDGQFTLIG 342


>gi|310794596|gb|EFQ30057.1| HECT-domain-containing protein [Glomerella graminicola M1.001]
          Length = 1184

 Score = 87.8 bits (216), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 121/240 (50%), Gaps = 30/240 (12%)

Query: 858  KLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGG----RKVAYTAFYMPDLA 913
            ++    +VL  + + NN T    I    +T  N+ +    GG     ++  T+ +   + 
Sbjct: 689  QIRAAARVLSLVFAANNMT---HIRRPDQTSRNMSSSTHRGGIQAHGQIIPTSDFYNTMI 745

Query: 914  TVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYL 973
               D+  ++  W S R     R   C YPF+    AK+ +LE D R Q    M +     
Sbjct: 746  DYTDLVAEFEAWESKR----GRFSFCQYPFLLSIWAKSQILEHDARRQQ---MTKARDAF 798

Query: 974  FLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYT---TNDFKKPLKVNDTSPIYLAPQV 1030
            F       T+ Q+L ++V R+ +V+D+++ +++     + D KK L++            
Sbjct: 799  FDSIMTRRTITQFLVLDVRRECLVDDSLKAVSEVIGSGSEDIKKGLRI------------ 846

Query: 1031 KFRGEEAEDAGGVRREFLMLLLKEILDPKY-GMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             F+GEE  DAGG+++E+ +LL++E+ +P++ GMF   E+++  +F+ ++FE  + +FL+G
Sbjct: 847  VFKGEEGLDAGGLKKEWFLLLVREVFNPEHVGMFIYDEDSQFCYFNPNSFETSDQFFLVG 906



 Score = 53.9 bits (128), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 18/113 (15%)

Query: 718 NHYGITEYEETRSI-WFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL-- 774
            H G+  Y+E     +F+ ++FE  +  FL+G + GLAIYN TI+++  P   ++K+L  
Sbjct: 875 EHVGMFIYDEDSQFCYFNPNSFETSDQFFLVGVVLGLAIYNSTILDVALPPFAFRKLLAS 934

Query: 775 -----------DEPIL---LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                        P +   L+DL +  P LA  L+ +L+Y + ++E  F + F
Sbjct: 935 APTAWAGPSAHPRPTMNYTLEDLAEYRPRLAAGLRQLLEY-DGNVETTFQLDF 986


>gi|91203943|emb|CAJ71596.1| similar to regulator of chromosome condensation [Candidatus
           Kuenenia stuttgartiensis]
          Length = 387

 Score = 87.8 bits (216), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 111/242 (45%), Gaps = 36/242 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WHS+AL   G V+ WGG+  GQLG      KS +IP + K L+ + +  +C G     
Sbjct: 95  GAWHSIALKSDGTVWAWGGNWAGQLG--DGSYKSSNIPIKTKELSGI-IAISCGGQ---- 147

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    H+LAL   G V+ WG +  GQLG+   D K+Q IP R+ GL ++  + A  
Sbjct: 148 ---------HNLALKSDGTVWAWGINDKGQLGI--GDAKNQQIPIRIPGLNNIVAISA-G 195

Query: 123 GYSHCLVLTSSGVVTCTHKEN------GCGSDPSQGVQ-SNL-----VQDSHTTITSLNS 170
           GY H L + S G +      N      G  ++    V  SNL     V        +L S
Sbjct: 196 GY-HSLAIKSDGSLWAWGSNNMEQLGDGSATNRCSPVHVSNLRDIIAVNGGGDFSLALKS 254

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
            G +  WG+N   Q+G + + T    P  V  + +  I  IA   NHS  L+    +++ 
Sbjct: 255 DGTIMAWGSNGLSQLG-DGTTTNRNTPVNVSDVRD--IIEIAAKGNHSLALTIE-GKVWE 310

Query: 231 FG 232
           FG
Sbjct: 311 FG 312



 Score = 83.2 bits (204), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 120/261 (45%), Gaps = 37/261 (14%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G +H+LAL   G +++WG + +GQLG      K++  P +VK L+S+ V+         
Sbjct: 44  AGAFHTLALKPDGSLWSWGKNEYGQLG--DGTIKNKHSPVQVKHLSSIIVIDG------- 94

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  G WHS+AL   G V+ WGG+  GQLG      KS +IP + K L+ + +  +C
Sbjct: 95  -------GAWHSIALKSDGTVWAWGGNWAGQLG--DGSYKSSNIPIKTKELSGI-IAISC 144

Query: 122 AGYSHCLVLTSSGVVTC----THKENGCGSDPSQGVQ------SNLVQDSHTTITSL--N 169
            G  H L L S G V         + G G   +Q +       +N+V  S     SL   
Sbjct: 145 GG-QHNLALKSDGTVWAWGINDKGQLGIGDAKNQQIPIRIPGLNNIVAISAGGYHSLAIK 203

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           S G L+ WG+N   Q+G + S T    P  V +L +  I  +  G + S  L KS   + 
Sbjct: 204 SDGSLWAWGSNNMEQLG-DGSATNRCSPVHVSNLRD--IIAVNGGGDFSLAL-KSDGTIM 259

Query: 230 AFGIGSAVQL-DSPKSVHKTP 249
           A+G     QL D   +   TP
Sbjct: 260 AWGSNGLSQLGDGTTTNRNTP 280


>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 2154

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 52/241 (21%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            +  + + G V   G  ++G+LG  ++D            L S++ + +  G+    + TS
Sbjct: 1843 TFVVQNNGTVLACGEGSYGRLGQGNSDD-----------LHSLTAISSIQGFVVTQLATS 1891

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
                 H+LA+ + GEVF+WG   +G+LG  ++D+  Q  P++++ L    V+Q   G+ H
Sbjct: 1892 VGSDGHTLAVTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVIQLSCGFKH 1949

Query: 127  CLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG 186
              V+T+                                       G+L+T+GN +YG++G
Sbjct: 1950 SAVVTAD--------------------------------------GKLFTFGNGDYGRLG 1971

Query: 187  INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH 246
            +  + T    P RV +L +  I  +ACG NH+  +S   + ++AFG G   +L    +V 
Sbjct: 1972 L-GTTTNKKVPTRVVALESHQIGYVACGLNHTLCVSADGTNVWAFGDGDFGKLGQGNTVG 2030

Query: 247  K 247
            K
Sbjct: 2031 K 2031



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 121/265 (45%), Gaps = 37/265 (13%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            H+LA+ + GEVF+WG   +G+LG  ++D+  Q  P++++ L    V+Q   G+ H  V+T
Sbjct: 1897 HTLAVTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVIQLSCGFKHSAVVT 1954

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            +             G++FT+G   +G+LGL +   K   +P RV  L S  +     G +
Sbjct: 1955 AD------------GKLFTFGNGDYGRLGLGTTTNK--KVPTRVVALESHQIGYVACGLN 2000

Query: 126  HCLVLTSSGVVTCTHKENGCGS------------DPSQGVQSNLVQDSHTTI---TSLNS 170
            H L +++ G       +   G                + +Q ++++          +L+ 
Sbjct: 2001 HTLCVSADGTNVWAFGDGDFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSVALSK 2060

Query: 171  PGELYTWGNNEY-GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G+++TWG     GQ      +    +PQ V SL    I  + CGA H+ VL+ S   ++
Sbjct: 2061 YGKVFTWGQERLIGQPDTRGGSN--CQPQEVASLSGYFIEDVVCGAEHTLVLT-SDGDVW 2117

Query: 230  AFGIGSAVQ--LDSPKSVHKTPQLI 252
             +G  S  Q  L    S  + PQL+
Sbjct: 2118 GWGSNSEGQLGLGHTNSPVREPQLV 2142


>gi|390359472|ref|XP_782992.2| PREDICTED: probable E3 ubiquitin-protein ligase HECTD2-like
            [Strongylocentrotus purpuratus]
          Length = 784

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 108/253 (42%), Gaps = 63/253 (24%)

Query: 901  KVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDF-LCNYPFIFDAKAKTTLLEMDQR 959
            KV YT FY   L  + D+  +Y  W    P G+ + F  C YPF+   +AK  +++ D  
Sbjct: 340  KVPYTCFYNNTLDNI-DLMKEYHAW--QNPVGNQQIFTFCQYPFVLSLQAKRNIMQKDSE 396

Query: 960  IQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVN 1019
             QM     +T      Q   P+    +L ++V R ++V D++ E+A     D KK L+V 
Sbjct: 397  QQMIMTARRTLVAKVQQREMPNMNMLFLNLKVRRSHLVSDSLHEVAN-KKQDLKKKLRVT 455

Query: 1020 DTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTF 1079
                        F GE   D GG+ +E+ +LLL+++   +YGMF  +++T   WF+    
Sbjct: 456  ------------FAGEPGLDMGGLTKEWFLLLLRKVFREEYGMFTYFKKTHCFWFNP--- 500

Query: 1080 EDQNMYFLIGKEYVPCTYISKYSMFKEYEETRSIWFSEDTFEDQNMYF-LIGTLCGLAIY 1138
                           CT                         D N  F L+G L GLA+Y
Sbjct: 501  --------------ACT-------------------------DCNQEFNLVGVLMGLAVY 521

Query: 1139 N---YTVRFPART 1148
            N     +RFPA T
Sbjct: 522  NSIILDIRFPAIT 534



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 17/112 (15%)

Query: 719 HYGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            YG+ T +++T   WF+    +      L+G L GLA+YN  I+++ FP   YKK+L   
Sbjct: 483 EYGMFTYFKKTHCFWFNPACTDCNQEFNLVGVLMGLAVYNSIILDIRFPAITYKKLLSPA 542

Query: 778 IL---------------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
           ++               ++DL+ ++P L   L+++L Y + D+E+    TF+
Sbjct: 543 VVPYNKPQASVGRCKVTMEDLEQVNPDLCHGLKELLKY-DGDVEEDLCTTFQ 593


>gi|432889733|ref|XP_004075335.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Oryzias
           latipes]
          Length = 527

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 99/248 (39%), Gaps = 62/248 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++AL   GEVF WG +  GQ+G  S    +Q  P+RV       VV          
Sbjct: 136 GSHHTIALTADGEVFAWGYNNSGQVG--SGSTANQPTPRRVSSCLQSKVV---------- 183

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +    G   S+A+ D GE++ WG + +GQLGL   +  +Q  P R+  L  V+VVQ   
Sbjct: 184 -VNVGCGQLCSMAVLDNGEIYGWGYNCNGQLGL--GNNGNQQTPCRIAALQGVNVVQVAC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G V                                      Y WG N Y
Sbjct: 241 GYAHTLALTDEGFV--------------------------------------YAWGANSY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLP----IALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
           GQ+G  N +      Q + +L+N      + + AC  +H+        ++  +G      
Sbjct: 263 GQLGTGNKSN-----QALPTLINTDKERMVEVAACHTSHTSAAKTQSGQVLMWGQCRGQA 317

Query: 239 LDSPKSVH 246
           + SP   H
Sbjct: 318 VSSPHLTH 325



 Score = 46.2 bits (108), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 44/200 (22%)

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
           + +ND  EVF  G +  G LGL   D +S   P+R+                   VL   
Sbjct: 37  VTVND--EVFALGTNCSGCLGL--GDLQSTIEPRRID------------------VLCGK 74

Query: 134 GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            +V+ ++     G+ P            H  I +  + GE++ WG+N Y Q+G   +N  
Sbjct: 75  KIVSLSY-----GTGP------------HVVIAT--ADGEVFAWGHNGYSQLGNGTTNHG 115

Query: 194 VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
           +T      +L+   +  +ACG++H+  L+     ++A+G  ++ Q+ S  + ++ TP+ +
Sbjct: 116 LTPALVSTNLLGKRVTEVACGSHHTIALTAD-GEVFAWGYNNSGQVGSGSTANQPTPRRV 174

Query: 253 HGPWIASPVAMTAGEDSLVS 272
               + S V +  G   L S
Sbjct: 175 -SSCLQSKVVVNVGCGQLCS 193


>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
          Length = 4802

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 136/314 (43%), Gaps = 39/314 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+LAL   G+VF+WG    G+LG    +  S   PK ++ L S  +     G    
Sbjct: 3055 SGGKHALALTQDGKVFSWGEGEDGKLG--HGNNMSLDKPKLIETLKSKRIRDIACGSG-- 3110

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      HS A+   GE++TWG   +G+LG    D  +Q+ PK V+ L    VVQ  
Sbjct: 3111 ----------HSAAIASNGELYTWGLGEYGRLG--HGDTVTQARPKLVQTLVGHRVVQVA 3158

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQDSHTTIT----------- 166
             G   +  + LT+ G V      +    G   S G  + LV +    +            
Sbjct: 3159 CGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLGVVQVECGAQFS 3218

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   GE++TWG  +Y ++G  N +  V KP  VE L    I  +A GA H   ++ + 
Sbjct: 3219 LALTKYGEVWTWGKGDYFRLGHGNDH-HVRKPTLVEGLRGKKIVHVAVGALHCLAVTDT- 3276

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYS 284
             ++YA+G      Q +   SV++ P L+H    A    ++ G     SHS   V+    S
Sbjct: 3277 GQVYAWGDNDHGQQGNGTTSVNRKPSLVHELEDARVNRVSCGS----SHSIAWVLVDQPS 3332

Query: 285  GGDHSIVTVTKSSD 298
             G+   VT   + D
Sbjct: 3333 SGNQEPVTFPTARD 3346



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 29/236 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   G ++TWG   +G+LG    D   Q  PK V+ L    V+    G     
Sbjct: 4090 GGHHSAAITSAGWLYTWGKGRYGRLG--HGDSDDQLRPKVVEALQDYKVIDVACG----- 4142

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L + D   V++WG   +G+LG   +D     +P ++  LA + V++   
Sbjct: 4143 -----SGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSD--GCKVPLKIDSLAGLGVIKVEC 4195

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSL 168
            G    + LT SG V    K +    G G+D            QG +   +        + 
Sbjct: 4196 GSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVAC 4255

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
            +  GE++TWG+N+ GQ+G + + + + +P+ V +L    I  +ACG+ H+   S +
Sbjct: 4256 SDKGEVFTWGDNDEGQLG-DGTTSALHRPRLVHALQGKKITRVACGSAHTLAWSTA 4310



 Score = 80.5 bits (197), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 120/271 (44%), Gaps = 37/271 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSH 60
            +G  H LAL+  G V++WG    G+LG    +K S   PK ++ L  V ++  AC G+  
Sbjct: 4037 SGGKHCLALSSEGHVYSWGEGDDGKLG--HGNKMSYDRPKLIEDLLGVEIIDIACGGH-- 4092

Query: 61   CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ- 119
                       HS A+   G ++TWG   +G+LG    D   Q  PK V+ L    V+  
Sbjct: 4093 -----------HSAAITSAGWLYTWGKGRYGRLG--HGDSDDQLRPKVVEALQDYKVIDV 4139

Query: 120  AC-AGYSHCLVLT-SSGVVTCTHKENG-CGSDPSQGVQSNLVQDSHTTI----------- 165
            AC +G +  L +T    V +    + G  G   S G +  L  DS   +           
Sbjct: 4140 ACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQF 4199

Query: 166  -TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              +L   G +YTWG  +Y ++G + ++  V +P++V +L    I  IA G+ H    S  
Sbjct: 4200 SVALTRSGAVYTWGKGDYHRLG-HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDK 4258

Query: 225  VSRLYAFGIGSAVQL-DSPKSVHKTPQLIHG 254
               ++ +G     QL D   S    P+L+H 
Sbjct: 4259 -GEVFTWGDNDEGQLGDGTTSALHRPRLVHA 4288



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 117/251 (46%), Gaps = 34/251 (13%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL   G V++WG    G+LG    D  S   PK ++ L   ++V    G +      
Sbjct: 520 HHLALTQDGCVYSWGNGDGGRLG--HGDTVSYDEPKLIEALLEKNIVFIACGST------ 571

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
                 +S AL+  GE++TWG   +G+LG  + D     IP  V  L   +VV  AC +G
Sbjct: 572 ------YSAALSVSGELYTWGRGNYGRLGHGNFD--DVMIPTLVTTLKGHTVVHVACGSG 623

Query: 124 YSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQSNLVQDSHTTI------------TSLN 169
            S  L +T+SG+V +    + G  G   + G ++  + D    I             +L 
Sbjct: 624 DSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALT 683

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           + GE+YTWG  +  ++G + S   V  P+ +ESL +  I  ++ GA H  VL++    +Y
Sbjct: 684 AHGEVYTWGKGDTYRLG-HGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTED-QFVY 741

Query: 230 AFGIGSAVQLD 240
            +G     Q+D
Sbjct: 742 GWGRNDYGQID 752



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 116/261 (44%), Gaps = 39/261 (14%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+++  G  T+G+LGL   D  +   PK +  L+   V++  A +S         G  H+
Sbjct: 3013 GKLYACGEGTNGRLGL--GDDNNVCEPKPIPFLSQF-VIKKVAVHS---------GGKHA 3060

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL   G+VF+WG    G+LG    +  S   PK ++ L S  +     G  H   + S+
Sbjct: 3061 LALTQDGKVFSWGEGEDGKLG--HGNNMSLDKPKLIETLKSKRIRDIACGSGHSAAIASN 3118

Query: 134  GVVTC----THKENGCGSDPSQGVQSNLVQ---------------DSHTTITSLNSPGEL 174
            G +       +   G G   +Q  +  LVQ               D+ T   +L + G +
Sbjct: 3119 GELYTWGLGEYGRLGHGDTVTQ-ARPKLVQTLVGHRVVQVACGSRDAQT--MALTTDGCV 3175

Query: 175  YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
            Y+WG+ ++G++G   S+   T P  VE L  L +  + CGA  S  L+K    ++ +G G
Sbjct: 3176 YSWGDGDFGKLGRGGSDGCYT-PLVVERLNGLGVVQVECGAQFSLALTK-YGEVWTWGKG 3233

Query: 235  SAVQLDSPKSVH-KTPQLIHG 254
               +L      H + P L+ G
Sbjct: 3234 DYFRLGHGNDHHVRKPTLVEG 3254



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 103/236 (43%), Gaps = 43/236 (18%)

Query: 7    SLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+ +  G ++ WG +  GQLG LE    K   +P   + L+++  +Q   G      +T
Sbjct: 3936 TLSWDGSGAIYGWGHNHRGQLGGLEGPKVK---LPAPCESLSALRPIQLAGGEQTLFAVT 3992

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV--VQACAG 123
            +             G+V++ G    G+LG+   D  S  IP  ++ +  V +  V   +G
Sbjct: 3993 AD------------GKVYSTGYGAAGRLGIGGTD--SVMIPTLLESIQHVFIKKVAVSSG 4038

Query: 124  YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTI------------------ 165
              HCL L+S G V       G G D   G  + +  D    I                  
Sbjct: 4039 GKHCLALSSEGHVYSW----GEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHS 4094

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
             ++ S G LYTWG   YG++G  +S+  + +P+ VE+L +  +  +ACG+  +  L
Sbjct: 4095 AAITSAGWLYTWGKGRYGRLGHGDSDDQL-RPKVVEALQDYKVIDVACGSGDAQTL 4149



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 83/204 (40%), Gaps = 45/204 (22%)

Query: 53  QACAGYSHCLV--LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK 110
           Q   G+S  LV  + S +   H LAL   G V++WG    G+LG    D  S   PK ++
Sbjct: 499 QRVHGFSDKLVTMIASHSDGKHHLALTQDGCVYSWGNGDGGRLG--HGDTVSYDEPKLIE 556

Query: 111 GLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNS 170
            L   ++V    G ++   L+ SG                                    
Sbjct: 557 ALLEKNIVFIACGSTYSAALSVSG------------------------------------ 580

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL-Y 229
             ELYTWG   YG++G  N +  V  P  V +L    +  +ACG+  S  L  + S + +
Sbjct: 581 --ELYTWGRGNYGRLGHGNFD-DVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVF 637

Query: 230 AFGIGSAVQLDSPKS-VHKTPQLI 252
           ++G G   +L    +   KTP+++
Sbjct: 638 SWGDGDYGKLGRGGTDGSKTPKIV 661



 Score = 41.6 bits (96), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 6/68 (8%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYS 59
            TG  H +A +D GEVFTWG +  GQLG    D  + ++  P+ V  L    + +   G +
Sbjct: 4247 TGSLHCVACSDKGEVFTWGDNDEGQLG----DGTTSALHRPRLVHALQGKKITRVACGSA 4302

Query: 60   HCLVLTST 67
            H L  ++ 
Sbjct: 4303 HTLAWSTA 4310


>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
           guttata]
          Length = 526

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 103/244 (42%), Gaps = 54/244 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+ L   GEV+TWG +  GQ+G  S    +Q IP+RV      S +Q      + +
Sbjct: 136 GSHHSMVLTSDGEVYTWGYNNSGQVG--SGSTANQPIPRRV-----TSCLQ------NKI 182

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V+    G   S+A+ + GEV+ WG + +GQLGL S+   +Q  P R+  L  + V +   
Sbjct: 183 VVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSG--NQPTPCRIAALQGIRVQRVAC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 241 GYAHTLVLTDE--------------------------------------GQIYAWGANSY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G  N +   + P  V    +  I + AC + H+        ++Y +G      +  P
Sbjct: 263 GQLGTGNKSNQ-SYPTTVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVTFP 321

Query: 243 KSVH 246
              H
Sbjct: 322 HLTH 325



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 40/167 (23%)

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
           EVF  G +  G LG  + D +S   P+R+  L    +  AC  Y                
Sbjct: 42  EVFVLGMNCSGCLG--TGDMQSTIEPRRLDSLCGKKI--ACLSY---------------- 81

Query: 141 KENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRV 200
                GS P            H  + +    GE+YTWG+N Y Q+G   +N      Q  
Sbjct: 82  -----GSGP------------HVVLAT--EEGEVYTWGHNAYSQLGNGTTNHGFVPCQVS 122

Query: 201 ESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK 247
            +LVN  +  +ACG++HS VL+ S   +Y +G  ++ Q+ S  + ++
Sbjct: 123 TNLVNKKVIEVACGSHHSMVLT-SDGEVYTWGYNNSGQVGSGSTANQ 168



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 89/227 (39%), Gaps = 57/227 (25%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
           EVF  G +  G LG  + D +S   P+R+  L        C     CL   S     H +
Sbjct: 42  EVFVLGMNCSGCLG--TGDMQSTIEPRRLDSL--------CGKKIACLSYGSGP---HVV 88

Query: 75  ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHCLVLTSS 133
              + GEV+TWG + + QLG  +       +P +V   L +  V++   G  H +VLTS 
Sbjct: 89  LATEEGEVYTWGHNAYSQLG--NGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSD 146

Query: 134 GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
           G                                      E+YTWG N  GQ+G + S   
Sbjct: 147 G--------------------------------------EVYTWGYNNSGQVG-SGSTAN 167

Query: 194 VTKPQRVES-LVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
              P+RV S L N  +  IACG   S  + ++   +Y +G     QL
Sbjct: 168 QPIPRRVTSCLQNKIVVNIACGQMCSMAVVEN-GEVYVWGYNGNGQL 213


>gi|335307229|ref|XP_003360755.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like, partial
           [Sus scrofa]
          Length = 406

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/99 (44%), Positives = 67/99 (67%), Gaps = 4/99 (4%)

Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y E  S +WF  +    + M FL G LCGL++YN  ++N+PFPLAL+KK+LD+  
Sbjct: 121 YGLFIYPEDGSCMWFPVNG---KKMYFLFGILCGLSLYNLNVVNLPFPLALFKKLLDQKP 177

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
            L+DLK+LSP L KSLQ++L+    D+++  G+ F  ++
Sbjct: 178 SLEDLKELSPLLGKSLQEVLNDEADDIKEELGLCFSIYW 216



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 15/101 (14%)

Query: 989  VEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFL 1048
            ++V R ++VEDT+R+L+Q    D +K L             V+F  E      GV+ EF 
Sbjct: 62   LKVRRSHLVEDTLRQLSQADATDLRKVL------------VVEFIKEICSVGEGVKSEFF 109

Query: 1049 MLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              + +E++  +YG+F   E+   +WF  +    + MYFL G
Sbjct: 110  HCIFEEMIKKEYGLFIYPEDGSCMWFPVNG---KKMYFLFG 147


>gi|444912858|ref|ZP_21233017.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444716551|gb|ELW57397.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 394

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 120/275 (43%), Gaps = 59/275 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLA    G V+ WG +T GQLG        +S P ++  L+++  V   AG+ H L L 
Sbjct: 67  HSLARRSDGSVWAWGENTTGQLG--DGTTTLRSTPTKIATLSNMERV--AAGHGHSLALR 122

Query: 66  S------------------------------TTGLWHSLALNDCGEVFTWGGDTHGQLGL 95
           +                                G  HSLAL+  G+V++WG D  G    
Sbjct: 123 AGKVWAWGKPDSGAIKTAPVEVPGLSDVVAIAAGFSHSLALSQSGQVWSWGNDNAGH--- 179

Query: 96  ESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKE--NGCGSD-PSQG 152
                 + + P +V+GL  +  +   AG S+ L L + G V           GSD PS  
Sbjct: 180 ------ANNTPVQVEGLPGIKAI--AAGVSYSLALGTDGSVWAWGDNTLGQLGSDTPSSA 231

Query: 153 VQSNLVQ--------DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLV 204
               + +           T   +L++ G ++TWG N++GQ+G   ++T  ++PQ+V  L 
Sbjct: 232 TPVKVAELPMITFIAAGSTHALALDTAGGVWTWGANDHGQLGDGTTSTKRSQPQQVSGLA 291

Query: 205 NLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           N  I  +A G  HS  L  S + + A+G  SA QL
Sbjct: 292 N--IQALAGGNGHSLAL-NSANDVMAWGRDSAGQL 323



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 99/198 (50%), Gaps = 33/198 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G+ +SLAL   G V+ WG +T GQLG   +D  S + P +V  L  ++ + A        
Sbjct: 199 GVSYSLALGTDGSVWAWGDNTLGQLG---SDTPSSATPVKVAELPMITFIAA-------- 247

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G  H+LAL+  G V+TWG + HGQLG  +   K +S P++V GLA++  +    
Sbjct: 248 ------GSTHALALDTAGGVWTWGANDHGQLGDGTTSTK-RSQPQQVSGLANIQAL--AG 298

Query: 123 GYSHCLVLTSSGVVTCTHKENGC--GSDPSQGVQSNLVQDS-----------HTTITSLN 169
           G  H L L S+  V    +++    G D S   QS  V+ S           H+   ++ 
Sbjct: 299 GNGHSLALNSANDVMAWGRDSAGQLGDDLSLKDQSRPVKTSSLTNATAISAGHSHSLAVL 358

Query: 170 SPGELYTWGNNEYGQMGI 187
           S G L+ WG+NE G++G+
Sbjct: 359 SDGSLFAWGSNENGRLGV 376


>gi|158300198|ref|XP_551819.3| AGAP012366-PA [Anopheles gambiae str. PEST]
 gi|157013042|gb|EAL38675.3| AGAP012366-PA [Anopheles gambiae str. PEST]
          Length = 916

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 100/212 (47%), Gaps = 42/212 (19%)

Query: 902  VAYTAFYMPDLATVCDIRIDY--FRWISGRPNG---------STRDFLCNYPFIFDAKAK 950
            V Y  FY   L  V ++  DY  ++ I+   NG         ST      Y FI     K
Sbjct: 463  VPYEEFYNELLCDVVEMDHDYLEYKSIASAVNGALSLIGTDPSTIFSFMQYAFILTPTTK 522

Query: 951  TTLLEMDQRIQMEHAMNQTNFYLF----------LQTFNPHTLNQYLEVEVSRDNIVEDT 1000
            T  L  D RI+M ++  + +F             LQ  NP     YL +++ RD+I++D 
Sbjct: 523  TLALYYDSRIRM-YSERRLSFLQQQQQLRQNSSALQAVNP-----YLNLKIRRDHIIDDA 576

Query: 1001 IREL---AQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILD 1057
            + EL   A     D KK L             V+F GE+  D GGV +EF  L+++EI +
Sbjct: 577  LVELEIIAMSNPKDLKKQL------------VVEFTGEQGIDEGGVSKEFFQLIIEEIFN 624

Query: 1058 PKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            P YGMF   E++ ++WF+  +FE++  + LIG
Sbjct: 625  PDYGMFVTNEDSNTVWFNSISFENEAQFTLIG 656



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 61/92 (66%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKD 785
           E++ ++WF+  +FE++    LIG + GLAIYN  I+ + FP+ +Y+K++       DLKD
Sbjct: 634 EDSNTVWFNSISFENEAQFTLIGIVLGLAIYNNIILAVNFPMVVYRKLMGMKGSFLDLKD 693

Query: 786 LSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
           L+P L  SL+ +LDY E D+E+VF  TF+  Y
Sbjct: 694 LNPVLFNSLKSLLDYTENDMEEVFMQTFKIGY 725


>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 554

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 125/276 (45%), Gaps = 34/276 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL D G V  WG ++ GQLG  +   +S  +     GL + + + A A         
Sbjct: 101 HSLALTDTGVVLAWGSNSRGQLGDGTTTDRSTPV---TVGLPAGTTITALA--------- 148

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HSLAL D G V  WG +++GQLG       ++S P  V GL + + + A A  +
Sbjct: 149 --AGRRHSLALTDTGAVLAWGSNSNGQLG--DGTTTARSTPVTV-GLPAGTTITALAAST 203

Query: 126 HCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSP---------- 171
           + L LT +G      + +  + G G+   +     +   + TTIT+L +           
Sbjct: 204 YSLALTDTGAALAWGSNSRGQLGDGTTTDRSTPVTVSLPAGTTITALAASYDHSLALTDT 263

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G +  WG+N  GQ+G + + T  + P  V       I  +A G +H+ VL+ S   + A+
Sbjct: 264 GAVLAWGSNSNGQLG-DGTTTNRSTPVTVGLPAGTTITALAAGRSHTLVLT-SAGAVLAW 321

Query: 232 GIGSAVQL-DSPKSVHKTPQLIHGPWIASPVAMTAG 266
           G  S  QL D   +   TP  +  P   +  A+ AG
Sbjct: 322 GSNSNGQLGDGTTTDRSTPVTVGLPAGTTITALAAG 357



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 116/259 (44%), Gaps = 34/259 (13%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL D G V  WG +++GQLG       ++S P  V GL + + + A A  +      
Sbjct: 153 HSLALTDTGAVLAWGSNSNGQLG--DGTTTARSTPVTV-GLPAGTTITALAAST------ 203

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 +SLAL D G    WG ++ GQLG        +S P  V   A  ++    A Y 
Sbjct: 204 ------YSLALTDTGAALAWGSNSRGQLG--DGTTTDRSTPVTVSLPAGTTITALAASYD 255

Query: 126 HCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTITS----------LNSP 171
           H L LT +G V    + ++ + G G+  ++     +   + TTIT+          L S 
Sbjct: 256 HSLALTDTGAVLAWGSNSNGQLGDGTTTNRSTPVTVGLPAGTTITALAAGRSHTLVLTSA 315

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G +  WG+N  GQ+G + + T  + P  V       I  +A G  HS  L+ + + L A+
Sbjct: 316 GAVLAWGSNSNGQLG-DGTTTDRSTPVTVGLPAGTTITALAAGYYHSLALTDTGAVL-AW 373

Query: 232 GIGSAVQL-DSPKSVHKTP 249
           G  S  QL D   +   TP
Sbjct: 374 GGNSYGQLGDGTTTDRSTP 392



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 119/280 (42%), Gaps = 33/280 (11%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           V  WG +  GQLG       ++S P  V   A  ++    AG S            HSLA
Sbjct: 59  VLAWGDNFSGQLG--DGTTTARSTPVTVGLPAGTTITALAAGGS------------HSLA 104

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           L D G V  WG ++ GQLG        +S P  V   A  ++    AG  H L LT +G 
Sbjct: 105 LTDTGVVLAWGSNSRGQLG--DGTTTDRSTPVTVGLPAGTTITALAAGRRHSLALTDTGA 162

Query: 136 V----TCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSP---------GELYTWGNNEY 182
           V    + ++ + G G+  ++     +   + TTIT+L +          G    WG+N  
Sbjct: 163 VLAWGSNSNGQLGDGTTTARSTPVTVGLPAGTTITALAASTYSLALTDTGAALAWGSNSR 222

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL-DS 241
           GQ+G + + T  + P  V       I  +A   +HS  L+ + + L A+G  S  QL D 
Sbjct: 223 GQLG-DGTTTDRSTPVTVSLPAGTTITALAASYDHSLALTDTGAVL-AWGSNSNGQLGDG 280

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED-SLVSHSGGLVVK 280
             +   TP  +  P   +  A+ AG   +LV  S G V+ 
Sbjct: 281 TTTNRSTPVTVGLPAGTTITALAAGRSHTLVLTSAGAVLA 320



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 68/164 (41%), Gaps = 42/164 (25%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL D G V  WG +++GQLG       ++S P  V   A  ++    AG SH LVLT
Sbjct: 256 HSLALTDTGAVLAWGSNSNGQLG--DGTTTNRSTPVTVGLPAGTTITALAAGRSHTLVLT 313

Query: 66  ST----------------------------------------TGLWHSLALNDCGEVFTW 85
           S                                          G +HSLAL D G V  W
Sbjct: 314 SAGAVLAWGSNSNGQLGDGTTTDRSTPVTVGLPAGTTITALAAGYYHSLALTDTGAVLAW 373

Query: 86  GGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 129
           GG+++GQLG  +   +S  +   +    +++V+ +   +   LV
Sbjct: 374 GGNSYGQLGDGTTTDRSTPVTVGLPAGTTITVLVSMDNHGMALV 417


>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
           multifiliis]
          Length = 427

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 117/262 (44%), Gaps = 43/262 (16%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           S+AL+  G+V+TWG +  G LG       +   P+ V+ L ++ + Q             
Sbjct: 88  SMALSQDGKVYTWGKNKGGILGHYDITSFNMIQPELVEKLENIQIKQI------------ 135

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ----------------SIPKRVK 110
           + G +H  A++  GE++TWG   HG+LG E   K ++                 +P +V+
Sbjct: 136 SCGPFHMAAISQDGELYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQ 195

Query: 111 GLASVSVVQACAGYSHCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
            L  +   Q   G    +VLT +G V         + G  S+ +   Q   + D    I 
Sbjct: 196 SLNGIKCKQVSCGGQFTVVLTENGEVYSFGNSMKGQLGYQSEETGNFQPKKIPDLQNIIN 255

Query: 167 ---------SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANH 217
                    +++S G++YTWGNN++GQ+G NN +    +P +V       I  I+CG N 
Sbjct: 256 IDCGQQFSAAVSSSGKVYTWGNNDHGQLG-NNQSIYQARPNQVTGFGGNKIINISCGDNF 314

Query: 218 SFVLSKSVSRLYAFGIGSAVQL 239
              LS    +L+ +G G+  QL
Sbjct: 315 IAALSNE-GKLFTWGYGNDGQL 335



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 133/286 (46%), Gaps = 53/286 (18%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ----------------SIPKRVKGL 46
           G +H  A++  GE++TWG   HG+LG E   K ++                 +P +V+ L
Sbjct: 138 GPFHMAAISQDGELYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSL 197

Query: 47  ASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP 106
             +   Q   G    +VLT            + GEV+++G    GQLG +S ++     P
Sbjct: 198 NGIKCKQVSCGGQFTVVLT------------ENGEVYSFGNSMKGQLGYQS-EETGNFQP 244

Query: 107 KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENG-CGSD-------PSQ--GVQSN 156
           K++  L ++  +  C       V +S  V T  + ++G  G++       P+Q  G   N
Sbjct: 245 KKIPDLQNIINID-CGQQFSAAVSSSGKVYTWGNNDHGQLGNNQSIYQARPNQVTGFGGN 303

Query: 157 LVQD---SHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIAC 213
            + +       I +L++ G+L+TWG    GQ+G +N N  +  P+++E      I  + C
Sbjct: 304 KIINISCGDNFIAALSNEGKLFTWGYGNDGQLGHSNRN-DLYAPKQIE--FKEKIIKVDC 360

Query: 214 GANHSFVLSKSVSRLYAFGIGSAVQL------DSPKSVHKTPQLIH 253
           G  H+  L+++ ++LY FG G+  QL      +S  ++  TP+++ 
Sbjct: 361 GGTHTAFLTQN-NQLYLFGRGNEGQLGIGENIESEAAIRTTPKIVE 405



 Score = 47.8 bits (112), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 48/169 (28%)

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHK 141
           V+ WG    GQLGL  A++ +Q  P+ V+ L+  ++++  A  S  + L+          
Sbjct: 45  VYAWGYGNFGQLGL--ANENNQYSPQEVEKLSDRNIIKVKANKSVSMALS---------- 92

Query: 142 ENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG-INNSNTTVTKPQRV 200
                            QD           G++YTWG N+ G +G  + ++  + +P+ V
Sbjct: 93  -----------------QD-----------GKVYTWGKNKGGILGHYDITSFNMIQPELV 124

Query: 201 ESLVNLPIALIACGANHSFVLSKSVSRLYAFG------IGSAVQLDSPK 243
           E L N+ I  I+CG  H   +S+    LY +G      +G  +Q  S K
Sbjct: 125 EKLENIQIKQISCGPFHMAAISQD-GELYTWGNKDHGKLGHEIQQKSNK 172


>gi|297815950|ref|XP_002875858.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297321696|gb|EFH52117.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 962

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 109/241 (45%), Gaps = 44/241 (18%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WH+  +   G++FT+G  T G LG    D+ S +IP+ V+ L            + C 
Sbjct: 419 GPWHTAFVTSAGKLFTFGDGTFGALG--HGDRISTNIPREVEAL------------NGCR 464

Query: 63  VLTSTTGLWHSLAL-------NDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASV 115
            + +  G+WHS A+       +  G++FTWG    G+LG    D  S+ IP  V  L + 
Sbjct: 465 TIRTACGVWHSAAVVSVFGEASSSGKLFTWGDGDDGKLG--HGDIASRLIPLSVTELDTT 522

Query: 116 SVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQ------------GVQSNLVQD--- 160
           S  Q   G S  + L+ SG V          +DPSQ            G+  + VQ+   
Sbjct: 523 SFQQVACGQSITVALSMSGQVYAMGT-----ADPSQDDVVRAPSCIEGGLGKSFVQEVAC 577

Query: 161 SHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
            +  I  LNS  E+YTWG    GQ+G  ++      P  V++L    +  + CG+N++  
Sbjct: 578 GYHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRRM-PTLVKALKGKQVRKVVCGSNYTAT 636

Query: 221 L 221
           +
Sbjct: 637 I 637



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 105/254 (41%), Gaps = 54/254 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTH--GQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           G +H+ A+   G+++ WG   H  G LGL S    S   P R+  L  +  +        
Sbjct: 364 GEFHTCAVTTSGDLYAWGDGDHNAGLLGLGSG--ASHWKPVRI--LGQMEGIN------- 412

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
             V T + G WH+  +   G++FT+G  T G LG    D+ S +IP+ V+ L     ++ 
Sbjct: 413 --VRTISCGPWHTAFVTSAGKLFTFGDGTFGALG--HGDRISTNIPREVEALNGCRTIRT 468

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
             G  H     S+ VV                          +     +S G+L+TWG+ 
Sbjct: 469 ACGVWH-----SAAVV--------------------------SVFGEASSSGKLFTWGDG 497

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           + G++G  +  + +  P  V  L       +ACG + +  LS S  ++YA G     Q D
Sbjct: 498 DDGKLGHGDIASRLI-PLSVTELDTTSFQQVACGQSITVALSMS-GQVYAMGTADPSQDD 555

Query: 241 SPKSVHKTPQLIHG 254
               V + P  I G
Sbjct: 556 ----VVRAPSCIEG 565



 Score = 48.1 bits (113), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 68/182 (37%), Gaps = 54/182 (29%)

Query: 3   GLWHSLAL-------NDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 55
           G+WHS A+       +  G++FTWG    G+LG    D  S+ IP  V  L + S  Q  
Sbjct: 471 GVWHSAAVVSVFGEASSSGKLFTWGDGDDGKLG--HGDIASRLIPLSVTELDTTSFQQVA 528

Query: 56  AGYSHCLVLTST------------------------------------TGLWHSLALNDC 79
            G S  + L+ +                                     G  H   LN  
Sbjct: 529 CGQSITVALSMSGQVYAMGTADPSQDDVVRAPSCIEGGLGKSFVQEVACGYHHIAVLNSK 588

Query: 80  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCT 139
            EV+TWG  ++GQLG    D + + +P  VK L    V +   G ++   +       C 
Sbjct: 589 AEVYTWGKGSNGQLG--HGDTEYRRMPTLVKALKGKQVRKVVCGSNYTATI-------CL 639

Query: 140 HK 141
           HK
Sbjct: 640 HK 641


>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
 gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
          Length = 1996

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 132/295 (44%), Gaps = 42/295 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G +H+ A++  G++FTWG   H    L      S  IPKRV G   V  +Q         
Sbjct: 1262 GEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSG--PVEGLQ--------- 1310

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            VL+   G WHS      G++FT+G    G LG    D++S S PK VK L+ +  ++   
Sbjct: 1311 VLSVACGTWHSALATANGKLFTFGDGAFGVLG--HGDRESVSYPKEVKMLSGLKTLKVAC 1368

Query: 123  GYSHCL----VLTSSGVVTCTHK--------ENGCGSDPSQG------VQS------NLV 158
            G  H +    V+  +G  T + K        +N  G    +       V S      N +
Sbjct: 1369 GVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQI 1428

Query: 159  QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVES-LVNLPIALIACGANH 217
               HT   +L + G ++T G   +GQ+G +NS+  +  P  V+  LV   +  I+CG +H
Sbjct: 1429 ACGHTFTVALTTSGHVFTMGGTSHGQLGSSNSDGKL--PCLVQDRLVGEFVEEISCGDHH 1486

Query: 218  SFVLSKSVSRLYAFGIGSAVQLD-SPKSVHKTPQLIHGPWIASPVAMTAGEDSLV 271
              VL+ S S ++ +G GS  +L    K   KTP L+         +++ G D  V
Sbjct: 1487 VAVLT-SRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCGADQSV 1540


>gi|330801350|ref|XP_003288691.1| hypothetical protein DICPUDRAFT_152946 [Dictyostelium purpureum]
 gi|325081254|gb|EGC34776.1| hypothetical protein DICPUDRAFT_152946 [Dictyostelium purpureum]
          Length = 723

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 120/277 (43%), Gaps = 58/277 (20%)

Query: 805  LEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQ 864
            L+D        WY  +S +YF + I+ ++Q +   +    V    + D       S  LQ
Sbjct: 237  LQDPMKDVIIKWYNSLSKEYFIKTIINYEQFISVRIMSDEV--DLHKDPAIKGACS-ALQ 293

Query: 865  VLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFR 924
            +L K+N L                           R V +T FY   +    D+  D+  
Sbjct: 294  LLSKINDLK--------------------------RYVPFTDFYNDAINEDLDLFKDF-- 325

Query: 925  WISGRPNGSTRDF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTL 983
                  N +   F   N+P + +   K       Q +Q+EHA++Q N           + 
Sbjct: 326  ------NQANHSFTYANFPCVLNTITKG------QYLQIEHALSQNNHRTDFGRLGLTSA 373

Query: 984  NQYLEVEVSRDNIVEDTIRELAQ--YTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAG 1041
              +L  ++ R++I+ DT+  +A+  +  N+FKK LKV+            F GEE  D G
Sbjct: 374  LDFLIFKIRRESIITDTLDRIAELRHGKNEFKKELKVH------------FIGEEGIDEG 421

Query: 1042 GVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDT 1078
            GV+REF  L+++ I DP+YGMFK   ETR  WF+ D+
Sbjct: 422  GVKREFFQLIVRRIFDPEYGMFKYNNETRCFWFNPDS 458



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 54/80 (67%), Gaps = 2/80 (2%)

Query: 719 HYGITEYE-ETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            YG+ +Y  ETR  WF+ D+ ED     LIG L GLA+YN  I+++ FPL ++KK+L+ P
Sbjct: 439 EYGMFKYNNETRCFWFNPDS-EDLTEFQLIGILLGLALYNNIILDVHFPLVIFKKLLNLP 497

Query: 778 ILLQDLKDLSPTLAKSLQDI 797
           + L+D++ L PTL  SL ++
Sbjct: 498 LSLEDIESLDPTLFSSLMNV 517


>gi|345325025|ref|XP_001513851.2| PREDICTED: RCC1 and BTB domain-containing protein 1
           [Ornithorhynchus anatinus]
          Length = 531

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 100/244 (40%), Gaps = 54/244 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL D GEV+ WG +  GQ+G  S    +Q  P++V     +  V + A      
Sbjct: 136 GSHHSMALADDGEVYAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVSIA------ 187

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V+Q   
Sbjct: 188 -----CGQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPCRVAALHSVCVLQIVC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 241 GYAHTLALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G  N +  ++ P ++       + + AC + H+         +Y +G      +  P
Sbjct: 263 GQLGTGNKSNLLS-PAQIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLP 321

Query: 243 KSVH 246
              H
Sbjct: 322 HLTH 325



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 96/236 (40%), Gaps = 54/236 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L   + G V+ WG + + QLG  + ++              ++ +Q C       V  
Sbjct: 86  HVLLSTEDGIVYAWGHNGYSQLGNGTTNQ-------------GIAPIQICTNLMIKQVTE 132

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+AL D GEV+ WG +  GQ+G  S    +Q  P++V     +  V + A   
Sbjct: 133 VACGSHHSMALADDGEVYAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVSIA--- 187

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CG   S  V  N               GE+Y WG N  GQ+
Sbjct: 188 -------------------CGQTSSMAVLDN---------------GEVYGWGYNGNGQL 213

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           G+ N+   +T P RV +L ++ +  I CG  H+  L+     LYA+G  +  QL +
Sbjct: 214 GLGNNGNQLT-PCRVAALHSVCVLQIVCGYAHTLALTDE-GLLYAWGANTYGQLGT 267



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 2/82 (2%)

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G +Y WG+N Y Q+G   +N  +   Q   +L+   +  +ACG++HS  L+     +YA+
Sbjct: 94  GIVYAWGHNGYSQLGNGTTNQGIAPIQICTNLMIKQVTEVACGSHHSMALADD-GEVYAW 152

Query: 232 GIGSAVQLDSPKSVHK-TPQLI 252
           G  +  Q+ S  + ++ TP+ +
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKV 174


>gi|366166502|ref|ZP_09466257.1| regulator of chromosome condensation rcc1 [Acetivibrio
           cellulolyticus CD2]
          Length = 367

 Score = 87.4 bits (215), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 66/230 (28%), Positives = 100/230 (43%), Gaps = 59/230 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WH LAL D G+V+ WG +  GQ G      +  S P+++  L  +  + A        
Sbjct: 167 GGWHYLALLDNGDVYVWGTNPAGQFGNGKYSSEETSKPQKIDSLKDIVDIDA-------- 218

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
              ST    HS+AL+  G V+TWGG++  QLG  +  + S  I K+V GL+S+  V A  
Sbjct: 219 ---STE---HSIALDKSGNVYTWGGNSEDQLGYATQIEYSNEI-KKVSGLSSIKKVYAGP 271

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
             S+                                        +L+S G L+ WGNN  
Sbjct: 272 SNSY----------------------------------------ALDSDGTLWAWGNNIR 291

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+GI + ++ V  P +VE      +   +CG  H   + K  S ++A+G
Sbjct: 292 GQIGIGSESSEVKLPVKVEI---EEVKDFSCGFEHCIAVKKDGS-VWAWG 337


>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60467743|gb|EAL65761.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2083

 Score = 87.4 bits (215), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 129/263 (49%), Gaps = 50/263 (19%)

Query: 5    WHSLAL-NDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV---KGLASVSVVQACAGYSH 60
            W  +AL ++ GE+FTWG +  GQLG      K Q+ PKR+   +G + + +V+ C G   
Sbjct: 1227 WDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVE-CGGE-- 1283

Query: 61   CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                       HS+ ++    V++WG D  GQLG       SQ+ PK ++ ++   +   
Sbjct: 1284 -----------HSICVDSDYVVYSWGQDKFGQLG-HGTKSVSQNRPKIIEDISGQKIQAI 1331

Query: 121  CAGYSHCLVLTSSGVVTC----THKENGCGSDPSQGVQSNLVQDS--------------- 161
             AG++H +VL  SG +         + G GS  S+ + + +  ++               
Sbjct: 1332 AAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIA 1391

Query: 162  ----HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANH 217
                H+ I S N  GE+Y+WG  + GQ+G  N   ++ +P+ +E+L    +  I+CG  H
Sbjct: 1392 CGFGHSVICSDN--GEVYSWGLGKQGQLGHGNY-ESIARPRLIEALKG--VTKISCG--H 1444

Query: 218  SFVLSKS-VSRLYAFGIGSAVQL 239
             + ++ + +  +Y++G+G  ++L
Sbjct: 1445 FYTMATTDLKNVYSWGLGEHMKL 1467



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 58/226 (25%)

Query: 71   WHSLAL-NDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV---KGLASVSVVQACAGYSH 126
            W  +AL ++ GE+FTWG +  GQLG      K Q+ PKR+   +G + + +V+       
Sbjct: 1227 WDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVE------- 1279

Query: 127  CLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG 186
                              CG + S  V S+ V               +Y+WG +++GQ+G
Sbjct: 1280 ------------------CGGEHSICVDSDYV---------------VYSWGQDKFGQLG 1306

Query: 187  INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH 246
                + +  +P+ +E +    I  IA G  H+ VL KS   LY+FG G   QL       
Sbjct: 1307 HGTKSVSQNRPKIIEDISGQKIQAIAAGFAHTIVLKKS-GELYSFGYGDQGQLG------ 1359

Query: 247  KTPQLIHGPWIASPVAMTAGEDSLVS-HSGGLVVKKIYSGGDHSIV 291
                  HG +++  +      +++V    GG  + +I  G  HS++
Sbjct: 1360 ------HGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVI 1399



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 50/221 (22%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  H++ L   GE++++G    GQLG  S    S+SIP R++ L ++  +Q   G    
Sbjct: 1333 AGFAHTIVLKKSGELYSFGYGDQGQLGHGSF--VSKSIPTRIE-LNTIVGIQHGGGK--- 1386

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
             +     G  HS+  +D GEV++WG    GQLG    + +S + P+ ++ L  V+ +   
Sbjct: 1387 -ITQIACGFGHSVICSDNGEVYSWGLGKQGQLG--HGNYESIARPRLIEALKGVTKI--- 1440

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
                                   CG               H    +      +Y+WG  E
Sbjct: 1441 ----------------------SCG---------------HFYTMATTDLKNVYSWGLGE 1463

Query: 182  YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            + ++G + S+     P+ V+  +   ++ I CG NH+  L+
Sbjct: 1464 HMKLG-HGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLT 1503



 Score = 57.0 bits (136), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 18/132 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS+  +D GEV++WG    GQLG    + +S + P+ ++ L  V+ + +C       
Sbjct: 1393 GFGHSVICSDNGEVYSWGLGKQGQLG--HGNYESIARPRLIEALKGVTKI-SC------- 1442

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                  G ++++A  D   V++WG   H +LG      K+++ P+ V      +V +   
Sbjct: 1443 ------GHFYTMATTDLKNVYSWGLGEHMKLG--HGSDKNEATPRVVDFFIQKNVSKIVC 1494

Query: 123  GYSHCLVLTSSG 134
            G +H + LT  G
Sbjct: 1495 GLNHTITLTYPG 1506


>gi|156382044|ref|XP_001632365.1| predicted protein [Nematostella vectensis]
 gi|156219419|gb|EDO40302.1| predicted protein [Nematostella vectensis]
          Length = 697

 Score = 87.4 bits (215), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 36/210 (17%)

Query: 905  TAFYMPDLATVCDIRIDYFRWISGR-----PNGST-RDFLC--NYPFIFDAKAKTTLLEM 956
            + FY  +L+   D + +Y  W   R     P  ST +D LC  ++PF+ D  +K  ++ +
Sbjct: 242  SVFYCDELSKKLDFKKEYGNWQMARRLSKLPGYSTDKDSLCILDFPFLLDPASKVKVMHI 301

Query: 957  DQRIQME---------HAMNQTNFYLFLQTFNPHTLNQ--------YLEVEVSRDNIVED 999
            D   QM           A  Q    +F +T     LN         +L +EV RD+++ D
Sbjct: 302  DAVWQMRVEYQNAIVHQARVQQVQRIFEETEKSKKLNDGVKAAMCPFLVLEVRRDHLIRD 361

Query: 1000 TIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPK 1059
            T+ ++      D KKPLK+      Y+       GE   D GG+++EF  +++  I +P 
Sbjct: 362  TLSQI-HLKEYDLKKPLKIK-----YVGG-----GELGLDMGGLQKEFFHMIVDSIFEPG 410

Query: 1060 YGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            YGMF   EE+R++W + ++FE    + L+G
Sbjct: 411  YGMFTYIEESRTMWINGESFESLKEFELVG 440



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 62/96 (64%), Gaps = 2/96 (2%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y EE+R++W + ++FE      L+G + GLAIYN  I+++ FP  +YKK+  +  
Sbjct: 411 YGMFTYIEESRTMWINGESFESLKEFELVGIVLGLAIYNGIILDIHFPQVIYKKLQGQTP 470

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
            L+DL  + P+L  SL+ +L+Y E D+ED F  TF+
Sbjct: 471 SLEDLIGVQPSLGNSLKQLLEY-EGDVEDTFCYTFQ 505


>gi|402573744|ref|YP_006623087.1| cell wall binding protein [Desulfosporosinus meridiei DSM 13257]
 gi|402254941|gb|AFQ45216.1| putative cell wall binding protein [Desulfosporosinus meridiei DSM
           13257]
          Length = 955

 Score = 87.4 bits (215), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 119/244 (48%), Gaps = 30/244 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HS+AL   G+VFTWG +  G+LG  +   K   +P +V GL+ V  V A       
Sbjct: 78  SGTTHSVALQKDGDVFTWGSNFSGELG--NGTLKESFLPVQVTGLSDVKAVSA------- 128

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  G   ++AL + G V+ WG ++ G+LG  ++  KS   P ++ GL ++S V A 
Sbjct: 129 -------GTLFTVALKNDGTVWAWGDNSSGELG--NSTGKSSITPVQIPGLVNISAVSAQ 179

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQ-GVQSNLVQDS--HTTITSLNSPGELYTWG 178
              +H L LT  G V    K  G  S P +    SN+V  S  +   T+L + G ++ WG
Sbjct: 180 G--THTLALTDDGTV---WKWGGTISSPEKLESLSNIVAVSAGYDHFTALKADGTVWAWG 234

Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
            N  GQ+G + + T+ T P +V  L    +  I+ G  ++  L +    ++ +GI     
Sbjct: 235 ENGCGQLG-DGTITSRTSPIQVAGLTE--VKAISAGVRNTIALRQD-GTVWVWGIDFTKP 290

Query: 239 LDSP 242
           +D P
Sbjct: 291 MDQP 294



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 24/191 (12%)

Query: 46  LASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI 105
           L+S+   Q   G ++  +  S  G    LALN  G V+ WG + +GQ+G    D  + + 
Sbjct: 7   LSSLFAEQPVYGVTNNFIAASG-GSQSMLALNSDGTVWGWGINQNGQIG----DGTTNTK 61

Query: 106 PKRVK--GLASVSVVQACAGYSHCLVLTSSGVVTCTHKE------NGCGSDPSQGVQSNL 157
           P RVK  GLA V  +   +G +H + L   G V            NG   +    VQ   
Sbjct: 62  PYRVKVTGLADVKAI--ASGTTHSVALQKDGDVFTWGSNFSGELGNGTLKESFLPVQVTG 119

Query: 158 VQDSHTT------ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALI 211
           + D            +L + G ++ WG+N  G++G +   +++T P ++  LVN  I+ +
Sbjct: 120 LSDVKAVSAGTLFTVALKNDGTVWAWGDNSSGELGNSTGKSSIT-PVQIPGLVN--ISAV 176

Query: 212 ACGANHSFVLS 222
           +    H+  L+
Sbjct: 177 SAQGTHTLALT 187



 Score = 46.2 bits (108), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 5/77 (6%)

Query: 149 PSQGVQSNLVQDS--HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNL 206
           P  GV +N +  S    ++ +LNS G ++ WG N+ GQ+G     TT TKP RV+     
Sbjct: 15  PVYGVTNNFIAASGGSQSMLALNSDGTVWGWGINQNGQIG---DGTTNTKPYRVKVTGLA 71

Query: 207 PIALIACGANHSFVLSK 223
            +  IA G  HS  L K
Sbjct: 72  DVKAIASGTTHSVALQK 88


>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
          Length = 4853

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 29/236 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   G ++TWG   +G+LG    D   Q  PK V+ L    V+    G     
Sbjct: 4141 GGHHSAAITSAGWLYTWGKGRYGRLG--HGDSDDQLRPKVVEALQDYKVIDVACG----- 4193

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L + D   V++WG   +G+LG   +D     +P ++  LA + VV+   
Sbjct: 4194 -----SGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSD--GCKVPLKIDSLAGLGVVKVEC 4246

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSL 168
            G    + LT SG V    K +    G G+D            QG +   +        + 
Sbjct: 4247 GSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVAC 4306

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
            +  GE++TWG+N+ GQ+G + + + + +P+ V +L    I  +ACG+ H+   S +
Sbjct: 4307 SDKGEVFTWGDNDEGQLG-DGTTSALHRPRLVHALQGKKITRVACGSAHTLAWSTA 4361



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 134/308 (43%), Gaps = 39/308 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+LAL   G+VF+WG    G+LG    +  S   PK ++ L S  +     G    
Sbjct: 3106 SGGKHALALTQDGKVFSWGEGEDGKLG--HGNCISLDKPKLIEVLKSKRIRDIACGSG-- 3161

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      HS A+   GE++TWG   +G+LG    D  +Q+ PK V+ L    VVQ  
Sbjct: 3162 ----------HSAAIASNGELYTWGLGEYGRLG--HGDTITQTRPKLVQALIGHRVVQVA 3209

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQDSHTTIT----------- 166
             G   +  + LT+ G V      +    G   S G  + L+ D    +            
Sbjct: 3210 CGSRDAQTMALTTDGYVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQFS 3269

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   GE++TWG  +Y ++G  N +  V KP  VE L    I  +A GA H   ++ + 
Sbjct: 3270 LALTKYGEVWTWGKGDYFRLGHGNDH-HVRKPTLVEGLRGKKIIHVAVGALHCLAVTDT- 3327

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYS 284
             ++YA+G      Q +   SV++ P L+H    A    ++ G     SHS   V+    S
Sbjct: 3328 GQVYAWGDNDHGQQGNGTTSVNRKPSLVHDLEDARVNRVSCGS----SHSIAWVLVDQPS 3383

Query: 285  GGDHSIVT 292
             G+   VT
Sbjct: 3384 NGNQDPVT 3391



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 120/271 (44%), Gaps = 37/271 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSH 60
            +G  H +AL+  G V++WG    G+LG    +K S   PK ++ L  V +V  AC G+  
Sbjct: 4088 SGGKHCIALSSEGHVYSWGEGDDGKLG--HGNKVSYDRPKLIEDLLGVEIVDIACGGH-- 4143

Query: 61   CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ- 119
                       HS A+   G ++TWG   +G+LG    D   Q  PK V+ L    V+  
Sbjct: 4144 -----------HSAAITSAGWLYTWGKGRYGRLG--HGDSDDQLRPKVVEALQDYKVIDV 4190

Query: 120  AC-AGYSHCLVLT-SSGVVTCTHKENG-CGSDPSQGVQSNLVQDSHTTI----------- 165
            AC +G +  L +T    V +    + G  G   S G +  L  DS   +           
Sbjct: 4191 ACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQF 4250

Query: 166  -TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              +L   G +YTWG  +Y ++G + ++  V +P++V +L    I  IA G+ H    S  
Sbjct: 4251 SVALTRSGAVYTWGKGDYHRLG-HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDK 4309

Query: 225  VSRLYAFGIGSAVQL-DSPKSVHKTPQLIHG 254
               ++ +G     QL D   S    P+L+H 
Sbjct: 4310 -GEVFTWGDNDEGQLGDGTTSALHRPRLVHA 4339



 Score = 67.0 bits (162), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 121/271 (44%), Gaps = 44/271 (16%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL   G V++WG    G+LG    D  S   PK ++ L   +++    G +      
Sbjct: 579 HYLALTQDGCVYSWGNGDGGRLG--HGDTISYDEPKLIEALLEKNIIFIACGST------ 630

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
                 +S AL+  GE++TWG   +G+LG  + D      P  V  L   +VV  AC +G
Sbjct: 631 ------YSAALSANGELYTWGRGNYGRLGHGNFD--DVMTPTLVTTLKGHTVVHVACGSG 682

Query: 124 YSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQSNLVQDSHTTI------------TSLN 169
            S  L +T+SG+V +    + G  G   + G ++  + D    I             +L 
Sbjct: 683 DSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALT 742

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           + GE+YTWG  +  ++G + S   V  P+ +ESL +  +  ++ G  H   L++    +Y
Sbjct: 743 AHGEVYTWGKGDAYRLG-HGSEEHVRYPKVIESLRDRKVKDLSVGTTHILALTED-QFVY 800

Query: 230 AFGIGSAVQLDSPKSVHKTPQLIHGPWIASP 260
            +G     Q+D        P L  GP I+ P
Sbjct: 801 GWGRNDYGQID--------PTL--GPIISEP 821



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 54/222 (24%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+++  G  T+G+LGL   D  +   PK +  L+   V++  A +S         G  H+
Sbjct: 3064 GKLYACGEGTNGRLGL--GDDNNMCEPKAIPFLSQF-VIKKVAVHS---------GGKHA 3111

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL   G+VF+WG    G+LG    +  S   PK ++ L S  +                
Sbjct: 3112 LALTQDGKVFSWGEGEDGKLG--HGNCISLDKPKLIEVLKSKRI---------------- 3153

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                   ++  CGS  S  + SN               GELYTWG  EYG++G +    T
Sbjct: 3154 -------RDIACGSGHSAAIASN---------------GELYTWGLGEYGRLG-HGDTIT 3190

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSR-LYAFGIG 234
             T+P+ V++L+   +  +ACG+  +  ++ +    +Y++G G
Sbjct: 3191 QTRPKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDG 3232



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 43/236 (18%)

Query: 7    SLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+ +  G ++ WG +  GQLG LE    K   +P   + L+++  +Q   G      +T
Sbjct: 3987 TLSWDGSGAIYGWGHNHRGQLGGLEGPKVK---LPAPCESLSALRPIQLAGGEQTLFAVT 4043

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV--VQACAG 123
            +             G++++ G    G+LG+   D  S  IP  ++ +  V +  V   +G
Sbjct: 4044 AD------------GKIYSTGYGAAGRLGIGGTD--SVMIPTLLESIQHVFIKKVAVSSG 4089

Query: 124  YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTI------------------ 165
              HC+ L+S G V       G G D   G  + +  D    I                  
Sbjct: 4090 GKHCIALSSEGHVYSW----GEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHS 4145

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
             ++ S G LYTWG   YG++G  +S+  + +P+ VE+L +  +  +ACG+  +  L
Sbjct: 4146 AAITSAGWLYTWGKGRYGRLGHGDSDDQL-RPKVVEALQDYKVIDVACGSGDAQTL 4200



 Score = 61.2 bits (147), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 29/232 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S AL+  GE++TWG   +G+LG  + D      P  V  L   +VV    G     
Sbjct: 628 GSTYSAALSANGELYTWGRGNYGRLGHGNFD--DVMTPTLVTTLKGHTVVHVACG----- 680

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +L +   G VF+WG   +G+LG    D      PK V  L  ++VV+   
Sbjct: 681 -----SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTD--GSKTPKIVDKLLDINVVKVFC 733

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G      LT+ G V    K +    G GS+         + ++   V+D     T I +L
Sbjct: 734 GSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHILAL 793

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                +Y WG N+YGQ+        +++P    +L +  +  +A G   SF 
Sbjct: 794 TEDQFVYGWGRNDYGQID-PTLGPIISEPTLCPTLSSKTVIGLASGPTQSFA 844



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 22/179 (12%)

Query: 73   SLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
            +L+ +  G ++ WG +  GQLG LE    K   +P   + L+++  +Q   G      +T
Sbjct: 3987 TLSWDGSGAIYGWGHNHRGQLGGLEGPKVK---LPAPCESLSALRPIQLAGGEQTLFAVT 4043

Query: 132  SSGVVTCT----HKENGCGSDPSQGVQSNLVQDSHTTIT------------SLNSPGELY 175
            + G +  T        G G   S  + + L    H  I             +L+S G +Y
Sbjct: 4044 ADGKIYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVY 4103

Query: 176  TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
            +WG  + G++G  N   +  +P+ +E L+ + I  IACG +HS  ++ S   LY +G G
Sbjct: 4104 SWGEGDDGKLGHGN-KVSYDRPKLIEDLLGVEIVDIACGGHHSAAIT-SAGWLYTWGKG 4160



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 53/215 (24%)

Query: 40  PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
           P+RV G +   +           ++ S     H LAL   G V++WG    G+LG    D
Sbjct: 557 PQRVHGFSDKPIT----------MIASHADGKHYLALTQDGCVYSWGNGDGGRLG--HGD 604

Query: 100 KKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQ 159
             S   PK ++ L   +++                          CGS  S  + +N   
Sbjct: 605 TISYDEPKLIEALLEKNIIFIA-----------------------CGSTYSAALSAN--- 638

Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
                       GELYTWG   YG++G  N +  +T P  V +L    +  +ACG+  S 
Sbjct: 639 ------------GELYTWGRGNYGRLGHGNFDDVMT-PTLVTTLKGHTVVHVACGSGDSQ 685

Query: 220 VLSKSVSRL-YAFGIGSAVQLDSPKS-VHKTPQLI 252
            L  + S + +++G G   +L    +   KTP+++
Sbjct: 686 TLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIV 720



 Score = 41.6 bits (96), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 6/68 (8%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYS 59
            TG  H +A +D GEVFTWG +  GQLG    D  + ++  P+ V  L    + +   G +
Sbjct: 4298 TGSLHCVACSDKGEVFTWGDNDEGQLG----DGTTSALHRPRLVHALQGKKITRVACGSA 4353

Query: 60   HCLVLTST 67
            H L  ++ 
Sbjct: 4354 HTLAWSTA 4361


>gi|356539788|ref|XP_003538375.1| PREDICTED: uncharacterized protein LOC100794953 [Glycine max]
          Length = 1046

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 112/248 (45%), Gaps = 48/248 (19%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQ-ACAGYSH 60
           G +H+ AL D GEV+TWG D      L     +SQ IP+R+ G L  +S+   AC     
Sbjct: 364 GEYHTCALTDSGEVYTWGNDVCCADLLNEGRTRSQWIPQRLGGPLDGISISSVAC----- 418

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                   G WH+  ++ CG +FT+G  T G LG    D +S S PK V+ L  + V  A
Sbjct: 419 --------GEWHTAIVSSCGRLFTYGDGTFGVLG--HGDLRSYSSPKEVESLNGLRVRSA 468

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
             G  H                            + +V+         ++ G+L+TWG+ 
Sbjct: 469 ACGSWH---------------------------TAAIVEVMFDRFRYNSASGKLFTWGDG 501

Query: 181 EYGQMG-INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           + G++G ++N N  V  P RV  LV+     ++CG   +  L+ ++ +++A G     QL
Sbjct: 502 DEGRLGHVDNGNKIV--PTRVTQLVDYDFVQVSCGRMLTVALT-NMGKVFAMGSAKYGQL 558

Query: 240 DSPKSVHK 247
            +P +  K
Sbjct: 559 GNPHARDK 566



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 100/226 (44%), Gaps = 21/226 (9%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WH+  ++ CG +FT+G  T G LG    D +S S PK V+ L  + V  A  G  H  
Sbjct: 419 GEWHTAIVSSCGRLFTYGDGTFGVLG--HGDLRSYSSPKEVESLNGLRVRSAACGSWHTA 476

Query: 63  VLTSTTGLWHSLALNDC-GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
            +     ++     N   G++FTWG    G+LG    D  ++ +P RV  L     VQ  
Sbjct: 477 AIVEV--MFDRFRYNSASGKLFTWGDGDEGRLG--HVDNGNKIVPTRVTQLVDYDFVQVS 532

Query: 122 AGYSHCLVLTSSGVVTCTHKE------NGCGSDPSQGVQSNLVQDSHTTITS-------L 168
            G    + LT+ G V            N    D    V+  L Q+    I++       L
Sbjct: 533 CGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKVVIVEGQLKQEFVKVISTGSYHVAVL 592

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACG 214
            S G +YTWG  E GQ+G+ ++    T P  VE+L +  +  I CG
Sbjct: 593 TSAGSVYTWGRGEIGQLGLGDTEDRYT-PCFVEALRDRQVNTITCG 637



 Score = 43.5 bits (101), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 66/170 (38%), Gaps = 45/170 (26%)

Query: 69  GLWHSLALNDCGEVFTWGGDTHGQLGLE-SADKKSQSIPKRVKGLASVSVVQACAGYSHC 127
           G  H+  +   GEVF WG    G+LG +   D  S  I   + GL   +V  AC  Y  C
Sbjct: 312 GGKHAALVTKQGEVFCWGQGKWGRLGQKIDMDISSPKIVDSLNGLHVKTV--ACGEYHTC 369

Query: 128 LVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGI 187
                                                  +L   GE+YTWGN+      +
Sbjct: 370 ---------------------------------------ALTDSGEVYTWGNDVCCADLL 390

Query: 188 NNSNTTVT-KPQRVES-LVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
           N   T     PQR+   L  + I+ +ACG  H+ ++S S  RL+ +G G+
Sbjct: 391 NEGRTRSQWIPQRLGGPLDGISISSVACGEWHTAIVS-SCGRLFTYGDGT 439


>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1089

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 108/259 (41%), Gaps = 39/259 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+ AL   G+V  +G    GQLG+ + D  S S P+RV  L+   VV+  AG     
Sbjct: 52  GYEHTFALTSDGDVLGFGNGVKGQLGIGNTD--SHSNPQRVHLLSGKGVVKMAAG----- 104

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                  L HSLAL + G+++ +G +  GQLGL       +  P++V  L    + Q   
Sbjct: 105 -------LEHSLALTESGDLYAFGDNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLAC 157

Query: 123 GYSHCLVLTSSGVV------------TCTHKENG---CGSDPS--QGVQSNLVQD----- 160
           G  H  VLTSSG +               H   G     S P    G++   V       
Sbjct: 158 GQDHTAVLTSSGELFMFGNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGL 217

Query: 161 SHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
            HT   +L + G +Y WG N  GQ+G  ++    T     + L       +ACG  H+  
Sbjct: 218 QHT--VALTAAGGVYCWGENGRGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHTIA 275

Query: 221 LSKSVSRLYAFGIGSAVQL 239
           ++     +Y FG     QL
Sbjct: 276 VT-DCDDVYGFGSDRHGQL 293



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 102/242 (42%), Gaps = 39/242 (16%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            GL HSLAL + G+++ +G +  GQLGL       +  P++V  L    + Q   G  H 
Sbjct: 103 AGLEHSLALTESGDLYAFGDNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHT 162

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKS----QSIPKRVKGLASVSV 117
            VLTS+            GE+F +G +  G LG+     +      S P+ V GL    V
Sbjct: 163 AVLTSS------------GELFMFGNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHV 210

Query: 118 VQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQD----------------- 160
           VQ   G  H + LT++G V C   ENG G   +   Q+                      
Sbjct: 211 VQIGCGLQHTVALTAAGGVYC-WGENGRGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACG 269

Query: 161 -SHT-TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
             HT  +T  +   ++Y +G++ +GQ+G+      V  P R+  L    +     GA H+
Sbjct: 270 GQHTIAVTDCD---DVYGFGSDRHGQLGLGRRGVIVPVPTRIVRLGGRRVKNCVGGAWHT 326

Query: 219 FV 220
            +
Sbjct: 327 II 328



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 18/134 (13%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV-KGLASVSVVQ-ACAGYSH 60
           GL H++AL   G V+ WG +  GQLG  + D +++  P  V K L++   +  AC G   
Sbjct: 216 GLQHTVALTAAGGVYCWGENGRGQLG--TGDTQNRYTPSLVCKPLSAFKCIHVACGG--- 270

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                      H++A+ DC +V+ +G D HGQLGL         +P R+  L    V   
Sbjct: 271 ----------QHTIAVTDCDDVYGFGSDRHGQLGL-GRRGVIVPVPTRIVRLGGRRVKNC 319

Query: 121 CAGYSHCLVLTSSG 134
             G  H ++ T +G
Sbjct: 320 VGGAWHTIIGTVTG 333



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 90/199 (45%), Gaps = 30/199 (15%)

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVS-VVQACAGYSHCLVLTSSGVV--- 136
           V+  GG++ GQLG      +S  +P RV   LA    + +   GY H   LTS G V   
Sbjct: 10  VWAVGGNSKGQLG-NGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLGF 68

Query: 137 -TCTHKENGCG-----SDP-------SQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
                 + G G     S+P        +GV        H+   +L   G+LY +G+N  G
Sbjct: 69  GNGVKGQLGIGNTDSHSNPQRVHLLSGKGVVKMAAGLEHS--LALTESGDLYAFGDNLSG 126

Query: 184 QMGINNSNTTVTK-PQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG------IGSA 236
           Q+G+ ++ T   + PQ+V  L    I  +ACG +H+ VL+ S   L+ FG      +G A
Sbjct: 127 QLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSS-GELFMFGNNRDGALGVA 185

Query: 237 VQL-DSPKSVHKTPQLIHG 254
               + P  V   PQL+ G
Sbjct: 186 GHANEGPPIVASAPQLVTG 204


>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
           magnipapillata]
          Length = 725

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 126/256 (49%), Gaps = 40/256 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHC 61
           G  H++  ++ G++F++G +  GQLG    DK+++ +PK ++ +  + + Q AC      
Sbjct: 98  GRNHTIVYSESGKLFSFGCNEDGQLG--HVDKENELLPKEIESIPQMEIKQIAC------ 149

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  G +HS+ L++ G+V+ WG +  GQLGL   ++   S+PK++K      VV   
Sbjct: 150 -------GTYHSIILSEDGDVYVWGNNNEGQLGL--GEEVENSLPKKLK--FKKEVVSVS 198

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGS---DPSQGVQSNLVQ--------DSHTTIT---- 166
            GY H  ++T  G +  T  EN  G      SQ   + + Q        D + +++    
Sbjct: 199 CGYYHTALVTRDGFLY-TFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGAR 257

Query: 167 ---SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
              ++   G  Y WG+   GQ+G       V +P++++ L       ++CG +H+ V+++
Sbjct: 258 HTVAITKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAVVTE 317

Query: 224 SVSRLYAFGIGSAVQL 239
           S  +++ FG G   +L
Sbjct: 318 S-GKVFTFGDGRHGKL 332



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 39/255 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS  + + G ++ +G +  GQLGL     KS + P  VK L    V +   G +H +
Sbjct: 46  GDEHSAVVTESGRLYVFGSNDWGQLGL--GHTKSLNKPSFVKPLKPEKVRKVACGRNHTI 103

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V + +            G++F++G +  GQLG    DK+++ +PK ++ +  + + Q   
Sbjct: 104 VYSES------------GKLFSFGCNEDGQLG--HVDKENELLPKEIESIPQMEIKQIAC 149

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDS----------HTTITSL 168
           G  H ++L+  G V      N    G G +    +   L              HT + + 
Sbjct: 150 GTYHSIILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKKEVVSVSCGYYHTALVTR 209

Query: 169 NSPGELYTWGNNEYGQMGINN---SNTTVTKPQRVE-SLVNLPIALIACGANHSFVLSKS 224
           +  G LYT+G NE G++G+++   SNTTV  PQ V     N     ++CGA H+  ++K 
Sbjct: 210 D--GFLYTFGENELGKLGLSSSQLSNTTV--PQSVAMPADNDEYISVSCGARHTVAITKQ 265

Query: 225 VSRLYAFGIGSAVQL 239
               YA+G GS  QL
Sbjct: 266 -GHCYAWGDGSQGQL 279



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 44/178 (24%)

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V+    G  HS  + + G ++ +G +  GQLGL     KS + P  VK L    V +   
Sbjct: 40  VVEMACGDEHSAVVTESGRLYVFGSNDWGQLGL--GHTKSLNKPSFVKPLKPEKVRKVAC 97

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H +V + S                                      G+L+++G NE 
Sbjct: 98  GRNHTIVYSES--------------------------------------GKLFSFGCNED 119

Query: 183 GQMG-INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           GQ+G ++  N  +  P+ +ES+  + I  IACG  HS +LS+    +Y +G  +  QL
Sbjct: 120 GQLGHVDKENELL--PKEIESIPQMEIKQIACGTYHSIILSED-GDVYVWGNNNEGQL 174



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 12/100 (12%)

Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
           D H+ + +    G LY +G+N++GQ+G+ ++  ++ KP  V+ L    +  +ACG NH+ 
Sbjct: 47  DEHSAVVT--ESGRLYVFGSNDWGQLGLGHT-KSLNKPSFVKPLKPEKVRKVACGRNHTI 103

Query: 220 VLSKSVSRLYAFGIGSAVQLDS--------PKSVHKTPQL 251
           V S+S  +L++FG     QL          PK +   PQ+
Sbjct: 104 VYSES-GKLFSFGCNEDGQLGHVDKENELLPKEIESIPQM 142


>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
          Length = 531

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 100/230 (43%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+ L   GEV+TWG +  GQ+G  S    +Q IP+RV      S +Q      + +
Sbjct: 141 GSHHSMVLTSDGEVYTWGYNNSGQVG--SGSTANQPIPRRV-----TSCLQ------NKI 187

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V+    G   S+A+ + GEV+ WG + +GQLGL S+   +Q  P R+  L  + V +   
Sbjct: 188 VVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSG--NQPTPCRIAALQGIRVQRVAC 245

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT                                        G++Y WG N Y
Sbjct: 246 GYAHTLVLTDE--------------------------------------GQIYAWGANSY 267

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N +   + P  V    +  I + AC + H+        ++Y +G
Sbjct: 268 GQLGTGNKSNQ-SYPTTVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWG 316



 Score = 55.1 bits (131), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 40/167 (23%)

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
           EVF  G +  G LG  + D +S   P+R+  L    +  AC  Y                
Sbjct: 47  EVFVLGMNCSGCLG--TGDMQSTIEPRRLDSLCGKKI--ACLSY---------------- 86

Query: 141 KENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRV 200
                GS P            H  + +    GE+YTWG+N Y Q+G   +N      Q  
Sbjct: 87  -----GSGP------------HVVLAT--EEGEVYTWGHNAYSQLGNGTTNHGFVPCQVS 127

Query: 201 ESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK 247
            +LVN  +  +ACG++HS VL+ S   +Y +G  ++ Q+ S  + ++
Sbjct: 128 TNLVNKKVIEVACGSHHSMVLT-SDGEVYTWGYNNSGQVGSGSTANQ 173



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 89/227 (39%), Gaps = 57/227 (25%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
           EVF  G +  G LG  + D +S   P+R+  L        C     CL   S     H +
Sbjct: 47  EVFVLGMNCSGCLG--TGDMQSTIEPRRLDSL--------CGKKIACLSYGSGP---HVV 93

Query: 75  ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHCLVLTSS 133
              + GEV+TWG + + QLG  +       +P +V   L +  V++   G  H +VLTS 
Sbjct: 94  LATEEGEVYTWGHNAYSQLG--NGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSD 151

Query: 134 GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
           G                                      E+YTWG N  GQ+G + S   
Sbjct: 152 G--------------------------------------EVYTWGYNNSGQVG-SGSTAN 172

Query: 194 VTKPQRVES-LVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
              P+RV S L N  +  IACG   S  + ++   +Y +G     QL
Sbjct: 173 QPIPRRVTSCLQNKIVVNIACGQMCSMAVVEN-GEVYVWGYNGNGQL 218


>gi|357156536|ref|XP_003577490.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Brachypodium distachyon]
          Length = 422

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 116/267 (43%), Gaps = 33/267 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS A+   GE+F WG ++ GQLGL     K  S P++V  LA V V     G        
Sbjct: 133 HSCAVTADGELFVWGKNSSGQLGLGKGVGKVVSTPRKVDYLADVRVRMVALGSE------ 186

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLG-------LESADKKSQSIPKRVKGLASVSVV 118
                 HS+A+ + GE  +WG    G+LG       L      S+  P+ +K L  V + 
Sbjct: 187 ------HSIAVTEGGEALSWGAAGAGRLGHGHKSSILGFGMVSSEYTPRLIKNLDGVKIK 240

Query: 119 QACAGYSHCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTT------ITSL 168
           +  AG  H   +   G +      T K  G  +D  +      +Q S           +L
Sbjct: 241 RIAAGMLHSACIDEKGTLFIFGQKTEKVFGRSNDAPRPTVVEEIQFSEEVACGGYHTCAL 300

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVES-LVNLPIALIACGANHSFVLSKSVSR 227
              G+LY+WG+NE G +G+  +   V  P+ + S L  LP++ ++CG  H+ V+S     
Sbjct: 301 TDGGDLYSWGSNENGCLGLGVTG-MVRSPEVLRSTLFKLPVSKVSCGWKHTAVISG--ED 357

Query: 228 LYAFGIGSAVQLDSPKSVHKTPQLIHG 254
           +Y +G G A      +      QL HG
Sbjct: 358 IYTWGWGGANGTFFEEGQSSGGQLGHG 384



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 57/129 (44%), Gaps = 14/129 (10%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+L L   G VF  G +  GQLG+ S+       P  V G     VVQ  AG  H   +T
Sbjct: 81  HTLFLTQSGRVFATGLNDFGQLGIGSSTTHIVD-PIEVTGFGE-KVVQISAGNHHSCAVT 138

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           +             GE+F WG ++ GQLGL     K  S P++V  LA V V     G  
Sbjct: 139 AD------------GELFVWGKNSSGQLGLGKGVGKVVSTPRKVDYLADVRVRMVALGSE 186

Query: 126 HCLVLTSSG 134
           H + +T  G
Sbjct: 187 HSIAVTEGG 195


>gi|391347221|ref|XP_003747863.1| PREDICTED: probable E3 ubiquitin-protein ligase HECTD2-like
            [Metaseiulus occidentalis]
          Length = 793

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 93/201 (46%), Gaps = 21/201 (10%)

Query: 889  SNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAK 948
            +N  TP P     + Y  FY   L  + ++  +Y+RW +  P  S +   C YPFI    
Sbjct: 343  NNRNTPPP-----LEYAEFYNSALDHI-NLMAEYYRWQT--PGKSNKFSYCQYPFILSIV 394

Query: 949  AKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYT 1008
            AK  +L+ D   QM     ++     LQ   P     +L + V R ++V D++ E+A+  
Sbjct: 395  AKKFILQRDSEQQMILNARRSLLNRALQHQVPDLDVFFLNLNVRRQHLVSDSLNEIARKQ 454

Query: 1009 TNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEE 1068
              D KK LKV             F GE   D GG+ +E+ +LL+K+I    YGMF  + +
Sbjct: 455  A-DLKKKLKVT------------FVGEPGLDMGGLTKEWFLLLIKQIFSSDYGMFVYHNQ 501

Query: 1069 TRSIWFSEDTFEDQNMYFLIG 1089
             R  WFS     +   Y LIG
Sbjct: 502  ARCYWFSTAQIGNLREYNLIG 522



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 17/110 (15%)

Query: 720 YGITEYE-ETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y  + R  WFS     +     LIG L GLA+YN  I+++ FP A YKK+L  P+
Sbjct: 493 YGMFVYHNQARCYWFSTAQIGNLREYNLIGVLMGLAVYNSIILDLNFPTACYKKLLSPPV 552

Query: 779 L---------------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +               L+DL ++ P +   L+++L Y E ++E+ F + F
Sbjct: 553 VPSNMDTSNVGNCKFTLEDLSEVMPDVVVGLRELLSY-EGNVEEDFLMHF 601


>gi|196008365|ref|XP_002114048.1| hypothetical protein TRIADDRAFT_58118 [Trichoplax adhaerens]
 gi|190583067|gb|EDV23138.1| hypothetical protein TRIADDRAFT_58118 [Trichoplax adhaerens]
          Length = 429

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 130/270 (48%), Gaps = 54/270 (20%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESAD-KKSQSIPKRVKGLASVSVVQACAGYSHC 61
           G  H++AL   GE++TWG +    LG +++D  +++ +P  V GL +V ++Q  AG +  
Sbjct: 79  GGVHTVALTKAGEIYTWGCNDECALGRDTSDTSEAEYLPGLVDGLDNVKIIQVSAGDN-- 136

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGG--DTHGQLGLESADKKSQSIPKRVKGLASVSVVQ 119
                     H+ AL D G VF WG   D  G +GL  A K  Q  P  + G  +  V++
Sbjct: 137 ----------HTAALADDGRVFCWGNFWDNRGSIGLNLAGK--QPRPIVMLGDPNDPVIK 184

Query: 120 ACAGYSHCLVLTSSGVV---TCTHK-------ENGCGSDPSQGVQ-------SNLVQDSH 162
             +G +H   LT++G++    C  +       E  C  D  QG++       + + Q S 
Sbjct: 185 IGSGNNHVAALTANGLIFTWGCGEQGQLGRVAERFCSRDTRQGLKRFLQPAVARVTQRSK 244

Query: 163 TTIT------------SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIA- 209
             I             ++N+ GE++  G N YGQ+G N + T++    +++SL  L    
Sbjct: 245 KDIRFSDIFVGPYNLFAVNAAGEVFACGLNNYGQIG-NGNITSLYYLAKIDSLSALNDGN 303

Query: 210 -----LIACGANHSFVLSKSVSRLYAFGIG 234
                LIA G +H+ +L+++  R+Y+ G G
Sbjct: 304 DERQILIASGEHHTLILARN-GRVYSIGRG 332



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 88/198 (44%), Gaps = 32/198 (16%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHCLVLT 65
           SLA ++ G V   G    GQLGL   +   +S P  VK L  V  +Q AC G        
Sbjct: 30  SLASDEAGIVLVLGQGELGQLGL-GEEILERSRPTAVKKLLEVEFIQVACGGV------- 81

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD-KKSQSIPKRVKGLASVSVVQACAGY 124
                 H++AL   GE++TWG +    LG +++D  +++ +P  V GL +V ++Q  AG 
Sbjct: 82  ------HTVALTKAGEIYTWGCNDECALGRDTSDTSEAEYLPGLVDGLDNVKIIQVSAGD 135

Query: 125 SHCLVLTSSGVVTC---------THKENGCGSDPSQGVQSNLVQD-------SHTTITSL 168
           +H   L   G V C         +   N  G  P   V      D        +  + +L
Sbjct: 136 NHTAALADDGRVFCWGNFWDNRGSIGLNLAGKQPRPIVMLGDPNDPVIKIGSGNNHVAAL 195

Query: 169 NSPGELYTWGNNEYGQMG 186
            + G ++TWG  E GQ+G
Sbjct: 196 TANGLIFTWGCGEQGQLG 213



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 36/241 (14%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  H  AL   G +FTWG    GQLG  +    S+   + +K     +V +        
Sbjct: 187 SGNNHVAALTANGLIFTWGCGEQGQLGRVAERFCSRDTRQGLKRFLQPAVARVTQRSKKD 246

Query: 62  LVLTST-TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
           +  +    G ++  A+N  GEVF  G + +GQ+G  + +  S     ++  L++++    
Sbjct: 247 IRFSDIFVGPYNLFAVNAAGEVFACGLNNYGQIG--NGNITSLYYLAKIDSLSALN---- 300

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
             G     +L +SG                         + HT I + N  G +Y+ G  
Sbjct: 301 -DGNDERQILIASG-------------------------EHHTLILARN--GRVYSIGRG 332

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           +YG++G+       + P  +E+L N  I  + CG   SF +S S   +Y++G+G+ +QL 
Sbjct: 333 DYGRLGLGPDVKECSHPTEIETLANSDIKAVTCGLAVSFAVSNS-GDVYSWGMGTNLQLG 391

Query: 241 S 241
           S
Sbjct: 392 S 392



 Score = 44.3 bits (103), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 15/129 (11%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  H+L L   G V++ G   +G+LGL   D K  S P  ++ LA+ S ++A       
Sbjct: 312 SGEHHTLILARNGRVYSIGRGDYGRLGL-GPDVKECSHPTEIETLAN-SDIKAV------ 363

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                T GL  S A+++ G+V++WG  T+ QLG  + D      P  VK   S +   A 
Sbjct: 364 -----TCGLAVSFAVSNSGDVYSWGMGTNLQLGSSTDD--DILTPTLVKTKESYNFFAAS 416

Query: 122 AGYSHCLVL 130
           AG  H  +L
Sbjct: 417 AGGQHTAIL 425


>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
          Length = 4791

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 29/236 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   G ++TWG   +G+LG    D   Q  PK V+ L    V+    G     
Sbjct: 4079 GGHHSAAITSAGWLYTWGKGRYGRLG--HGDSDDQLRPKVVEALQDYKVIDVACG----- 4131

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L + D   V++WG   +G+LG   +D     +P ++  LA + V++   
Sbjct: 4132 -----SGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSD--GCKVPLKIDSLAGLGVIKVEC 4184

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSL 168
            G    + LT SG V    K +    G G+D            QG +   +        + 
Sbjct: 4185 GSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVAC 4244

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
            +  GE++TWG+N+ GQ+G + + + + +P+ V +L    I  +ACG+ H+   S +
Sbjct: 4245 SDKGEVFTWGDNDEGQLG-DGTTSALQRPRLVHALQGKKITRVACGSAHTLAWSTA 4299



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 121/269 (44%), Gaps = 35/269 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+LAL   G+VF+WG    G+LG    +  +   P+ ++ L S  +     G    
Sbjct: 3045 SGGKHALALTQDGKVFSWGEGEDGKLG--HGNCTTLDKPRLIESLKSKRIRDIACGSG-- 3100

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      HS A+   GE++TWG   +G+LG    D  +Q  PK V+ L+   VVQ  
Sbjct: 3101 ----------HSAAIASNGELYTWGLGEYGRLG--HGDTATQMKPKLVQALSGQRVVQVA 3148

Query: 122  AGY--SHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQSNLVQDSHTTIT----------- 166
             G   +  + LT+ G V T    + G  G   S G  + L+ D    +            
Sbjct: 3149 CGSRDAQTMSLTADGCVYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFS 3208

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   GE++TWG  +Y ++G  N +  V KP  VE L    I  +A GA H   ++ + 
Sbjct: 3209 LALTKYGEVWTWGKGDYFRLGHGNDH-HVRKPTLVEGLRGKKIVHVAVGALHCLAVTDT- 3266

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIH 253
             ++YA+G      Q +    V++ P L+H
Sbjct: 3267 GQVYAWGDNDHGQQGNGTTIVNRKPSLVH 3295



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 106/234 (45%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +Q  PK V+ L+   VVQ   G     
Sbjct: 3098 GSGHSAAIASNGELYTWGLGEYGRLG--HGDTATQMKPKLVQALSGQRVVQVACGSRDA- 3154

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +++L   G V+TWG    G+LG   +D      P  V  L  + VVQ   
Sbjct: 3155 ---------QTMSLTADGCVYTWGDGDFGKLGRGGSD--GCYTPLLVDRLNGLGVVQVEC 3203

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT  G V    K +    G G+D     P+  +G++   +   H  + +L+  
Sbjct: 3204 GAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKI--VHVAVGALHCL 3261

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N +     KP  V  L +  +  ++CG++HS  
Sbjct: 3262 AVTDTGQVYAWGDNDHGQQG-NGTTIVNRKPSLVHELDDTRMNRVSCGSSHSIA 3314



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 121/271 (44%), Gaps = 37/271 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSH 60
            +G  H LAL+  G V++WG    G+LG    ++ S   PK V+ L  + +V  AC G+  
Sbjct: 4026 SGGKHCLALSSEGHVYSWGEGDDGKLG--HGNRLSYDRPKLVEDLLGIEIVDIACGGH-- 4081

Query: 61   CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ- 119
                       HS A+   G ++TWG   +G+LG    D   Q  PK V+ L    V+  
Sbjct: 4082 -----------HSAAITSAGWLYTWGKGRYGRLG--HGDSDDQLRPKVVEALQDYKVIDV 4128

Query: 120  AC-AGYSHCLVLT-SSGVVTCTHKENG-CGSDPSQGVQSNLVQDSHTTI----------- 165
            AC +G +  L +T    V +    + G  G   S G +  L  DS   +           
Sbjct: 4129 ACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQF 4188

Query: 166  -TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              +L   G +YTWG  +Y ++G + ++  V +P++V +L    I  IA G+ H    S  
Sbjct: 4189 SVALTRSGAVYTWGKGDYHRLG-HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDK 4247

Query: 225  VSRLYAFGIGSAVQL-DSPKSVHKTPQLIHG 254
               ++ +G     QL D   S  + P+L+H 
Sbjct: 4248 -GEVFTWGDNDEGQLGDGTTSALQRPRLVHA 4277



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 110/251 (43%), Gaps = 59/251 (23%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL   G V++WG    G+LG    D  S   PK ++ L   +++    G +      
Sbjct: 520 HYLALTQDGCVYSWGNGDGGRLG--HGDNISHDEPKLIETLLEKNIIFIACGST------ 571

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
                 +S AL+  GE++TWG   +G+LG  S D    ++P  V  L    VV  AC +G
Sbjct: 572 ------YSAALSASGELYTWGRGNYGRLGHGSND--DVTVPTLVTTLKGHMVVHVACGSG 623

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
            S  L +T+SG+V                                      ++WG+ +YG
Sbjct: 624 DSQTLCVTASGIV--------------------------------------FSWGDGDYG 645

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPK 243
           ++G   S+ + T P+ V+ L+++ +  + CG   S  L+ +   +Y +G G A +L    
Sbjct: 646 KLGRGGSDGSKT-PKIVDKLLDINVVRVFCGGQFSAALT-ARGEVYTWGKGDAYRLGHGN 703

Query: 244 SVH-KTPQLIH 253
             H + P+LI 
Sbjct: 704 EEHVRYPKLIE 714



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 43/236 (18%)

Query: 7    SLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+ +  G ++ WG +  GQLG LE A  K   +P   + L+++  +Q   G      +T
Sbjct: 3925 TLSWDGSGAIYGWGHNHRGQLGGLEGAKIK---LPAPCESLSALRPIQLAGGEQTLFAVT 3981

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV--VQACAG 123
            +             G+V++ G    G+LG+   D  S  +P  ++ +  V +  V   +G
Sbjct: 3982 AD------------GKVYSTGYGAAGRLGIGGTD--SVMVPTLLESIQHVFIKKVAVNSG 4027

Query: 124  YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTI------------------ 165
              HCL L+S G V       G G D   G  + L  D    +                  
Sbjct: 4028 GKHCLALSSEGHVYSW----GEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHS 4083

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
             ++ S G LYTWG   YG++G  +S+  + +P+ VE+L +  +  +ACG+  +  L
Sbjct: 4084 AAITSAGWLYTWGKGRYGRLGHGDSDDQL-RPKVVEALQDYKVIDVACGSGDAQTL 4138



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 29/232 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S AL+  GE++TWG   +G+LG  S D    ++P  V  L    VV    G     
Sbjct: 569 GSTYSAALSASGELYTWGRGNYGRLGHGSND--DVTVPTLVTTLKGHMVVHVACG----- 621

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +L +   G VF+WG   +G+LG   +D      PK V  L  ++VV+   
Sbjct: 622 -----SGDSQTLCVTASGIVFSWGDGDYGKLGRGGSD--GSKTPKIVDKLLDINVVRVFC 674

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G      LT+ G V    K +    G G++         + ++   ++D     T I +L
Sbjct: 675 GGQFSAALTARGEVYTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILAL 734

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                +Y WG N+YGQ+        V++P    +L +  +  +A G   SF 
Sbjct: 735 TEDQFVYGWGRNDYGQID-PTLGPVVSEPSLCPTLSSKNVIGLASGPTQSFA 785



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 22/179 (12%)

Query: 73   SLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
            +L+ +  G ++ WG +  GQLG LE A  K   +P   + L+++  +Q   G      +T
Sbjct: 3925 TLSWDGSGAIYGWGHNHRGQLGGLEGAKIK---LPAPCESLSALRPIQLAGGEQTLFAVT 3981

Query: 132  SSGVVTCT----HKENGCGSDPSQGVQSNLVQDSHTTIT------------SLNSPGELY 175
            + G V  T        G G   S  V + L    H  I             +L+S G +Y
Sbjct: 3982 ADGKVYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVY 4041

Query: 176  TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
            +WG  + G++G  N   +  +P+ VE L+ + I  IACG +HS  ++ S   LY +G G
Sbjct: 4042 SWGEGDDGKLGHGN-RLSYDRPKLVEDLLGIEIVDIACGGHHSAAIT-SAGWLYTWGKG 4098



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 54/222 (24%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+++  G  T+G+LGL   D  +   PK +  L S  V++  A +S         G  H+
Sbjct: 3003 GKLYACGEGTNGRLGL--GDDYNMCEPKLIPFL-SQYVIKKVAVHS---------GGKHA 3050

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL   G+VF+WG    G+LG    +  +   P+ ++ L S  +                
Sbjct: 3051 LALTQDGKVFSWGEGEDGKLG--HGNCTTLDKPRLIESLKSKRI---------------- 3092

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                   ++  CGS  S  + SN               GELYTWG  EYG++G  ++ T 
Sbjct: 3093 -------RDIACGSGHSAAIASN---------------GELYTWGLGEYGRLGHGDTATQ 3130

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSR-LYAFGIG 234
            + KP+ V++L    +  +ACG+  +  +S +    +Y +G G
Sbjct: 3131 M-KPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVYTWGDG 3171



 Score = 42.0 bits (97), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            TG  H +A +D GEVFTWG +  GQLG       +   P+ V  L    + +   G +H 
Sbjct: 4236 TGSLHCVACSDKGEVFTWGDNDEGQLG--DGTTSALQRPRLVHALQGKKITRVACGSAHT 4293

Query: 62   LVLTST 67
            L  ++ 
Sbjct: 4294 LAWSTA 4299


>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
          Length = 1043

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 106/234 (45%), Gaps = 21/234 (8%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WH+  ++ CG +FT+G  T G LG    D +S S PK V+ L+ + V  A  G  H  
Sbjct: 419 GEWHTAIVSSCGRLFTYGDGTFGVLG--HGDLRSYSSPKEVESLSGLRVRSAACGSWHTA 476

Query: 63  VLTSTTGLWHSLALNDC-GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
            +     ++     N   G++FTWG    G+LG    D  S+ +P RV  L     VQ  
Sbjct: 477 AIVEV--MFDRFRYNSASGKLFTWGDGDEGRLG--HVDNGSKLVPTRVTQLVDYDFVQVS 532

Query: 122 AGYSHCLVLTSSGVVTCTHKE------NGCGSDPSQGVQSNLVQDSHTTITS-------L 168
            G    + LT+ G V            N    D +  V+  L Q+    I++       L
Sbjct: 533 CGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKAVMVEGQLKQEFVKVISTGSYHVAVL 592

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            S G +YTWG  E GQ+G+ ++    T P  VE+L +  +  I CG + +  +S
Sbjct: 593 TSGGSVYTWGRGENGQLGLGDTEDRYT-PCFVEALRDRQVNTITCGPSFTAAIS 645



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 112/249 (44%), Gaps = 48/249 (19%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQ-ACAGYSH 60
           G +H+ AL D GEV+TWG D      L     +SQ IP+++ G L  +S+   AC     
Sbjct: 364 GEYHTCALTDSGEVYTWGNDVCCADLLIEGRTRSQWIPQKLGGSLDGISISSVAC----- 418

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                   G WH+  ++ CG +FT+G  T G LG    D +S S PK V+ L+ + V  A
Sbjct: 419 --------GEWHTAIVSSCGRLFTYGDGTFGVLG--HGDLRSYSSPKEVESLSGLRVRSA 468

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
             G  H                              +V+         ++ G+L+TWG+ 
Sbjct: 469 ACGSWHTAA---------------------------IVEVMFDRFRYNSASGKLFTWGDG 501

Query: 181 EYGQMG-INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           + G++G ++N +  V  P RV  LV+     ++CG   +  L+ ++ +++A G     QL
Sbjct: 502 DEGRLGHVDNGSKLV--PTRVTQLVDYDFVQVSCGRMLTVALT-NMGKVFAMGSAKYGQL 558

Query: 240 DSPKSVHKT 248
            +P +  K 
Sbjct: 559 GNPHARDKA 567



 Score = 40.0 bits (92), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 37/61 (60%), Gaps = 2/61 (3%)

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           GE++ WG+ ++G++G    +  ++ P+ V+SL  L +  +ACG  H+  L+ S   +Y +
Sbjct: 323 GEVFCWGHGKWGRLG-QKIDMDISSPKIVDSLNGLHVKNVACGEYHTCALTDS-GEVYTW 380

Query: 232 G 232
           G
Sbjct: 381 G 381


>gi|410896622|ref|XP_003961798.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Takifugu
           rubripes]
          Length = 531

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 97/230 (42%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL D GEV+ WG +  GQ+G  S    +Q  P+RV       V           
Sbjct: 136 GSHHSMALTDSGEVYAWGYNNCGQVG--SGSTANQPTPRRVSSCLQNRV----------- 182

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            ++   G   SLA+ D GEV+ WG + +GQLGL   +  +Q  P R+  L  + V Q  +
Sbjct: 183 AVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGL--GNNGNQLTPCRLVALQGLCVQQVVS 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 241 GYAHSLALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N +  ++ P ++ +     + + AC + H+        ++Y +G
Sbjct: 263 GQLGTGNKSNQLS-PVQIMTEKERIVEIAACHSTHTSAAKTQSGQVYMWG 311



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 2/82 (2%)

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           GEL+ WG+N Y Q+G   +N  V       +L+N  +  +ACG++HS  L+ S   +YA+
Sbjct: 94  GELFAWGHNGYSQLGNGTTNQGVAPVLVSATLLNRKVTEVACGSHHSMALTDS-GEVYAW 152

Query: 232 GIGSAVQLDSPKSVHK-TPQLI 252
           G  +  Q+ S  + ++ TP+ +
Sbjct: 153 GYNNCGQVGSGSTANQPTPRRV 174



 Score = 40.0 bits (92), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 13/86 (15%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           ++G  HSLAL D G ++ WG +T+GQLG  + +K +Q  P ++       V  A    +H
Sbjct: 239 VSGYAHSLALTDEGLLYAWGANTYGQLG--TGNKSNQLSPVQIMTEKERIVEIAACHSTH 296

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWG 86
                       S A    G+V+ WG
Sbjct: 297 T-----------SAAKTQSGQVYMWG 311


>gi|327288514|ref|XP_003228971.1| PREDICTED: RCC1 domain-containing protein 1-like [Anolis
           carolinensis]
          Length = 266

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 37/222 (16%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L L++ G +F+WG   HGQLG    D + +  P+ V+ L  V++ +  AG        
Sbjct: 57  HMLLLDEAGTLFSWGSGRHGQLG--HGDLEDRPEPQAVEALQGVALKEVAAGG------- 107

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLES-ADKKSQSIPKRVKGLASVSVVQACAGY 124
                WHS  +++ G+++ WG +  GQLGL S A  +SQ   +   G    +  Q   G 
Sbjct: 108 -----WHSATVSEAGDLYLWGWNESGQLGLPSKAASESQGAARDTDGAGDRAQPQGPPGA 162

Query: 125 SHCLVLTSSGVVTCTHK----ENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
               +     ++         + GCGS              HT   ++   GELYTWG  
Sbjct: 163 DFISIQAFPALLHLPRGAEALKAGCGS-------------RHT--AAVTRTGELYTWGWG 207

Query: 181 EYGQMGINNSNTTVTKPQRVESLVN--LPIALIACGANHSFV 220
           +YGQ+G  ++ ++  +P+RV   V   L +  + CG   +FV
Sbjct: 208 QYGQLGHGDTASS-DRPRRVNHFVERGLSVVDVTCGLWATFV 248



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/136 (31%), Positives = 62/136 (45%), Gaps = 23/136 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLES-ADKKSQSIPKRVKGL-----------ASVS 50
           G WHS  +++ G+++ WG +  GQLGL S A  +SQ   +   G            A   
Sbjct: 106 GGWHSATVSEAGDLYLWGWNESGQLGLPSKAASESQGAARDTDGAGDRAQPQGPPGADFI 165

Query: 51  VVQACAGYSH----CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP 106
            +QA     H       L +  G  H+ A+   GE++TWG   +GQLG    D  S   P
Sbjct: 166 SIQAFPALLHLPRGAEALKAGCGSRHTAAVTRTGELYTWGWGQYGQLG--HGDTASSDRP 223

Query: 107 KRV-----KGLASVSV 117
           +RV     +GL+ V V
Sbjct: 224 RRVNHFVERGLSVVDV 239



 Score = 43.5 bits (101), Expect = 0.72,   Method: Composition-based stats.
 Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 2/89 (2%)

Query: 162 HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
           H  +  L+  G L++WG+  +GQ+G  +      +PQ VE+L  + +  +A G  HS  +
Sbjct: 55  HEHMLLLDEAGTLFSWGSGRHGQLGHGDLEDR-PEPQAVEALQGVALKEVAAGGWHSATV 113

Query: 222 SKSVSRLYAFGIGSAVQLDSPKSVHKTPQ 250
           S++   LY +G   + QL  P       Q
Sbjct: 114 SEA-GDLYLWGWNESGQLGLPSKAASESQ 141


>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 6906

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 115/250 (46%), Gaps = 30/250 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H +A+ D G  ++WG +  GQLG E+   K   +PK ++ +    +  A   Y H  
Sbjct: 444 GCEHLIAITDTGLAYSWGYNDRGQLGHENVGTK-LYLPKLIESIKEKKMKSAAVSYHHS- 501

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            L S +G  ++  +NDC           GQLGL+    + QS P+ VK L    V     
Sbjct: 502 ALVSVSGELYTFGMNDC-----------GQLGLDHT--QHQSTPQLVKALLGHHVSMVSC 548

Query: 123 GYSHCLVLTSSG-VVTC---THKENGCGSD-----PSQGVQSN----LVQDSHTTITSLN 169
           G  H ++ T SG V TC    H + G G +     P+Q V  N     V   +   T++ 
Sbjct: 549 GLYHMVLCTISGEVFTCGKNDHGQLGLGHNKQVKVPTQVVLPNELVCFVACGYYHATAIT 608

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           S G  Y++G N+YGQ+GI  S      P  +    N  +   ACG  H+ ++S S  +++
Sbjct: 609 STGLTYSFGRNDYGQLGI-GSKIHQNIPIALTISSNTRMVHAACGCYHTLLMSDS-GQVF 666

Query: 230 AFGIGSAVQL 239
            FG  +  QL
Sbjct: 667 VFGRNNKGQL 676



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 114/265 (43%), Gaps = 49/265 (18%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  H LA++  G V++WG +  GQLGL +   KS + P+ ++ L     +   A   H  
Sbjct: 3229 GCEHMLAISHDGAVYSWGYNDRGQLGLGTTVSKSHT-PRVIESLREKYFITFAAVSYH-- 3285

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     HS  +++ G++ T+G +  GQLGL+    + Q  P+ V+ L+S  V +   
Sbjct: 3286 ---------HSAVVSNNGDLLTFGMNDSGQLGLDHT--QHQHTPQLVETLSSQKVGRVAC 3334

Query: 123  GYSHCLVLTSSGVVTC-----------THKENG----------CGSDPSQGVQSNLVQ-- 159
            G  H + +   G V             +H +N               P     +  VQ  
Sbjct: 3335 GLYHTVAIVDDGDVYSFGKNEYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVY 3394

Query: 160  -DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLP----IALIACG 214
               + T+T L   G++ TWG N+YGQ+GI +      + + +   V LP    +   +CG
Sbjct: 3395 CGYYHTVTILEC-GKVVTWGRNDYGQLGIGSK-----EHKSIAQFVPLPLTSRVKRASCG 3448

Query: 215  ANHSFVLSKSVSRLYAFGIGSAVQL 239
              H+ +L  +  R   FG  +  QL
Sbjct: 3449 CYHTLLLLVN-GRPMVFGRNNKGQL 3472



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 123/277 (44%), Gaps = 41/277 (14%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
           G V T G +  GQ G  + D++   + + ++ L S  V            + ++ G  H 
Sbjct: 400 GVVLTCGLNKSGQCGHGNFDERVMLL-RPIQALRSHRVK----------YINASNGCEHL 448

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
           +A+ D G  ++WG +  GQLG E+   K   +PK ++ +    +  A   Y H  +++ S
Sbjct: 449 IAITDTGLAYSWGYNDRGQLGHENVGTK-LYLPKLIESIKEKKMKSAAVSYHHSALVSVS 507

Query: 134 GVVTCTHKENGCGS---DPSQGVQS-NLVQ---DSHTTITS--------LNSPGELYTWG 178
           G +  T   N CG    D +Q   +  LV+     H ++ S            GE++T G
Sbjct: 508 GELY-TFGMNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCG 566

Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
            N++GQ+G+ + N  V  P +V  L N  +  +ACG  H+  ++ S    Y+FG     Q
Sbjct: 567 KNDHGQLGLGH-NKQVKVPTQV-VLPNELVCFVACGYYHATAIT-STGLTYSFGRNDYGQ 623

Query: 239 LDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSG 275
           L     +H+            P+A+T   ++ + H+ 
Sbjct: 624 LGIGSKIHQN----------IPIALTISSNTRMVHAA 650



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 32/211 (15%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G VFT G +  GQ G+ + D++   +P  +  L+ + +    A          + G  H 
Sbjct: 3185 GAVFTCGLNKSGQCGIGNFDER-LIVPSPIPALSGIPITMVAA----------SNGCEHM 3233

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHCLVLTS 132
            LA++  G V++WG +  GQLGL +   KS + P+ ++ L     +  A   Y H  V+++
Sbjct: 3234 LAISHDGAVYSWGYNDRGQLGLGTTVSKSHT-PRVIESLREKYFITFAAVSYHHSAVVSN 3292

Query: 133  SG-VVTCTHKENG-CGSDPSQGVQSNLVQDSHTT------------ITSLNSPGELYTWG 178
            +G ++T    ++G  G D +Q   +  + ++ ++              ++   G++Y++G
Sbjct: 3293 NGDLLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFG 3352

Query: 179  NNEYGQMGINNSNTTVTKPQRVESLVNLPIA 209
             NEYGQ+G++++  T     +V  LV +P A
Sbjct: 3353 KNEYGQLGLSHTQNT-----KVPMLVKIPPA 3378



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 21/193 (10%)

Query: 80  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV-TC 138
           GE+++ G +++G+LGL    ++ Q     + G   +   Q  +G     +LTS GVV TC
Sbjct: 348 GELYSCGQNSYGELGLGDDIERHQLTSVPLCGWDHIR--QVVSGNEILAILTSDGVVLTC 405

Query: 139 THKENG-CGSD----------PSQGVQSNLVQDSHTT-----ITSLNSPGELYTWGNNEY 182
              ++G CG            P Q ++S+ V+  + +     + ++   G  Y+WG N+ 
Sbjct: 406 GLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDR 465

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G  N  T +  P+ +ES+    +   A   +HS ++S S   LY FG+    QL   
Sbjct: 466 GQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVS-GELYTFGMNDCGQLGLD 524

Query: 243 KSVHK-TPQLIHG 254
            + H+ TPQL+  
Sbjct: 525 HTQHQSTPQLVKA 537



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 100/240 (41%), Gaps = 54/240 (22%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
            E+F+ G + +G+L L   +  ++          S   +Q+ AG +  LV+          
Sbjct: 3134 EIFSCGQNNYGELCLGHCNPTNK---LERASFFSYKSIQSIAGGNEVLVV---------- 3180

Query: 75   ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG 134
             L   G VFT G +  GQ G+ + D++   +P  +  L+ + +    A            
Sbjct: 3181 -LMKDGAVFTCGLNKSGQCGIGNFDER-LIVPSPIPALSGIPITMVAAS----------- 3227

Query: 135  VVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTV 194
                    NGC          +++  SH         G +Y+WG N+ GQ+G+  + +  
Sbjct: 3228 --------NGC---------EHMLAISHD--------GAVYSWGYNDRGQLGLGTTVSKS 3262

Query: 195  TKPQRVESLV-NLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
              P+ +ESL     I   A   +HS V+S +   L  FG+  + QL    + H+ TPQL+
Sbjct: 3263 HTPRVIESLREKYFITFAAVSYHHSAVVSNN-GDLLTFGMNDSGQLGLDHTQHQHTPQLV 3321



 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 57/148 (38%), Gaps = 43/148 (29%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL+H +     GEVFT G + HGQLGL     K   +P +V     +    AC GY H  
Sbjct: 549 GLYHMVLCTISGEVFTCGKNDHGQLGL--GHNKQVKVPTQVVLPNELVCFVAC-GYYHAT 605

Query: 63  VLTST----------------------------------------TGLWHSLALNDCGEV 82
            +TST                                         G +H+L ++D G+V
Sbjct: 606 AITSTGLTYSFGRNDYGQLGIGSKIHQNIPIALTISSNTRMVHAACGCYHTLLMSDSGQV 665

Query: 83  FTWGGDTHGQLGLESADKKSQSIPKRVK 110
           F +G +  GQLG          +P +V+
Sbjct: 666 FVFGRNNKGQLGNRGNTDSLLPVPLKVR 693



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 18/97 (18%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKS--QSIPKRVKGLASVSVVQACAGYSH 60
            G +H++ + +CG+V TWG + +GQLG+ S + KS  Q +P     L   S V+       
Sbjct: 3396 GYYHTVTILECGKVVTWGRNDYGQLGIGSKEHKSIAQFVP-----LPLTSRVK------- 3443

Query: 61   CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLES 97
                 ++ G +H+L L   G    +G +  GQLG+ S
Sbjct: 3444 ----RASCGCYHTLLLLVNGRPMVFGRNNKGQLGVAS 3476


>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
            rotundata]
          Length = 4755

 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 29/234 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   G ++TWG   +G+LG    D + Q  PK V+ L    V+    G     
Sbjct: 4043 GGHHSAAITSAGWLYTWGKGRYGRLG--HGDSEDQLTPKLVEALQDYKVIDVACG----- 4095

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L + D   V++WG   +G+LG   +D     +P +++ LA + V++   
Sbjct: 4096 -----SGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSD--GCKVPMKIESLAGLGVIKVEC 4148

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSL 168
            G    + LT SG +    K +    G G+D            QG +   +        + 
Sbjct: 4149 GSQFSVALTRSGSIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVAC 4208

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            +  GE++TWG+N+ GQ+G + +   + +P+ V +L    I  +ACG+ H+   S
Sbjct: 4209 SDKGEVFTWGDNDEGQLG-DGTTCALQRPRLVHALQGKKITRVACGSAHTLAWS 4261



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 119/269 (44%), Gaps = 35/269 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+LAL   G VF+WG    G+LG    +  S   P+ ++ L S  +     G  H 
Sbjct: 3003 SGGKHALALTQDGRVFSWGEGEDGKLG--HGNCSSLDKPRLIESLKSKRIRDVACGSGHS 3060

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE++TWG   +G+LG    D  +Q  PK V+ L    V+Q  
Sbjct: 3061 AAITSS------------GELYTWGLGEYGRLG--HGDTNTQLKPKLVQSLVGQRVIQVA 3106

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQDSHTTIT----------- 166
             G   +  + LT+ G V      +    G   S G  + L+ D    +            
Sbjct: 3107 CGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFS 3166

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   GE++TWG  +Y ++G  N +  V KP  VE L    +  +A GA H   ++ + 
Sbjct: 3167 LALTKYGEVWTWGKGDYFRLGHGNDH-HVRKPTLVEGLRGKKVIHVAVGALHCLAVTDT- 3224

Query: 226  SRLYAFGIGSAVQLDSPKS-VHKTPQLIH 253
             ++YA+G     Q  +  + V+K P L+H
Sbjct: 3225 GQVYAWGDNDHGQQGNGSTIVNKKPSLVH 3253



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 105/234 (44%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +Q  PK V+ L    V+Q   G     
Sbjct: 3056 GSGHSAAITSSGELYTWGLGEYGRLG--HGDTNTQLKPKLVQSLVGQRVIQVACGSRDA- 3112

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      ++AL   G V++WG    G+LG   +D      P  V  L  + VVQ   
Sbjct: 3113 ---------QTMALTADGSVYSWGDGDFGKLGRGGSD--GCYTPLLVDRLNGLGVVQIEC 3161

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT  G V    K +    G G+D     P+  +G++   V   H  + +L+  
Sbjct: 3162 GAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKV--IHVAVGALHCL 3219

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N S     KP  V  L +  +  ++CG++HS  
Sbjct: 3220 AVTDTGQVYAWGDNDHGQQG-NGSTIVNKKPSLVHELDDARVNRVSCGSSHSIA 3272



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 56/234 (23%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSH 60
            +G  H LAL+  G V++WG    G+LG    ++ S   PK ++ L    +V  AC G+  
Sbjct: 3990 SGGKHCLALSSEGHVYSWGEGDDGKLG--HGNRLSYDRPKLIEELLGTEIVDVACGGH-- 4045

Query: 61   CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                       HS A+   G ++TWG   +G+LG    D + Q  PK V+ L    V+  
Sbjct: 4046 -----------HSAAITSAGWLYTWGKGRYGRLG--HGDSEDQLTPKLVEALQDYKVIDV 4092

Query: 121  CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
                                    CGS  +Q +    V D             +++WG+ 
Sbjct: 4093 -----------------------ACGSGDAQTL---CVTDDDN----------VWSWGDG 4116

Query: 181  EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
            +YG++G   S+     P ++ESL  L +  + CG+  S  L++S S +Y +G G
Sbjct: 4117 DYGKLGRGGSDGCKV-PMKIESLAGLGVIKVECGSQFSVALTRSGS-IYTWGKG 4168



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 54/222 (24%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+++  G  T+G+LGL   D  +   PK +  L S  V++  A +S         G  H+
Sbjct: 2961 GKLYACGEGTNGRLGL--GDDGNACEPKPIPFL-SQYVIKKVAVHS---------GGKHA 3008

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL   G VF+WG    G+LG    +  S   P+ ++ L S  +     G  H   +TSS
Sbjct: 3009 LALTQDGRVFSWGEGEDGKLG--HGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITSS 3066

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            G                                      ELYTWG  EYG++G  ++NT 
Sbjct: 3067 G--------------------------------------ELYTWGLGEYGRLGHGDTNTQ 3088

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSV-SRLYAFGIG 234
            + KP+ V+SLV   +  +ACG+  +  ++ +    +Y++G G
Sbjct: 3089 L-KPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDG 3129



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 108/252 (42%), Gaps = 59/252 (23%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL +   V++WG    G+LG    D+     PK ++ L   ++     G +      
Sbjct: 517 HYLALTEDSSVYSWGNGDGGRLG--HGDRTWYEEPKLIESLVDKNITFIACGST------ 568

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
                 +S AL+  GE++TWG   +G+LG  ++D     +P  V  L    +V  AC +G
Sbjct: 569 ------YSAALSSNGELYTWGRGNYGRLGHGNSD--DVMVPTLVSALNGHMIVYVACGSG 620

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
            S  L +T+SG+V                                      ++WG+ +YG
Sbjct: 621 DSQTLCVTASGIV--------------------------------------FSWGDGDYG 642

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPK 243
           ++G    N + T P+ V+ L+++ +A + CG   S  L+ +   +Y +G G A +L    
Sbjct: 643 KLGRGGCNGSKT-PKIVDKLLDINVAKVYCGGQFSAALT-AYGEVYTWGKGEAYRLGHGN 700

Query: 244 SVH-KTPQLIHG 254
             H + P+ I  
Sbjct: 701 EEHVRYPKAIEA 712



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 102/236 (43%), Gaps = 43/236 (18%)

Query: 7    SLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+ +  G ++ WG +  GQLG LE A  K   +P   + L+++  VQ   G      +T
Sbjct: 3889 TLSWDGSGAIYGWGHNHRGQLGGLEGAKVK---LPVLCESLSALRPVQLTGGEQTLFAVT 3945

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV--VQACAG 123
            +             G+V+  G    G+LG+   D  S  +P  ++ +  V V  V   +G
Sbjct: 3946 AD------------GKVYATGYGAVGRLGIGGTD--SVMMPTLLESIQHVFVKKVAVNSG 3991

Query: 124  YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTI------------------ 165
              HCL L+S G V       G G D   G  + L  D    I                  
Sbjct: 3992 GKHCLALSSEGHVYSW----GEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHS 4047

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
             ++ S G LYTWG   YG++G  +S   +T P+ VE+L +  +  +ACG+  +  L
Sbjct: 4048 AAITSAGWLYTWGKGRYGRLGHGDSEDQLT-PKLVEALQDYKVIDVACGSGDAQTL 4102



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 29/232 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S AL+  GE++TWG   +G+LG  ++D     +P  V  L    +V    G     
Sbjct: 566 GSTYSAALSSNGELYTWGRGNYGRLGHGNSD--DVMVPTLVSALNGHMIVYVACG----- 618

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +L +   G VF+WG   +G+LG    +      PK V  L  ++V +   
Sbjct: 619 -----SGDSQTLCVTASGIVFSWGDGDYGKLGRGGCN--GSKTPKIVDKLLDINVAKVYC 671

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G      LT+ G V    K      G G++         + +++  V++       + +L
Sbjct: 672 GGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLAL 731

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                +Y WG N+YGQ+      T V++P    +L    +  + CG   SF 
Sbjct: 732 TEDQLVYGWGRNDYGQID-PALGTIVSEPTLCPTLSGKNVIGLVCGPTQSFA 782



 Score = 40.4 bits (93), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            TG  H +A +D GEVFTWG +  GQLG       +   P+ V  L    + +   G +H 
Sbjct: 4200 TGSLHCVACSDKGEVFTWGDNDEGQLG--DGTTCALQRPRLVHALQGKKITRVACGSAHT 4257

Query: 62   LVLTS 66
            L  ++
Sbjct: 4258 LAWST 4262


>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
 gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
          Length = 443

 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 125/262 (47%), Gaps = 33/262 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LA+   G+V +WG + +GQLGL + +     +P++++    V V    AG  H   +T
Sbjct: 130 HCLAVTMAGQVQSWGRNQNGQLGLGTTEDSL--LPQKIQAFEGVCVKMIAAGAEHTAAVT 187

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                         G+++ WG   +G LGL   D+  + +P++V  +    +V    G+ 
Sbjct: 188 ED------------GDLYGWGWGRYGNLGL--GDRNDRLLPEKVSSVEGEKMVLVACGWR 233

Query: 126 HCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTIT----------SLNSP 171
           H + ++ SG +       + + G G      V   L     +TI+          +L S 
Sbjct: 234 HTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSTISQISGGWRHTMALTSE 293

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G+LY WG N++GQ+G+ N N     P +V    +  I+ +ACG  H+  LS+    ++++
Sbjct: 294 GKLYGWGWNKFGQVGVGN-NDDHCSPVQVHFPEDQKISQVACGWRHTLALSEK-KNVFSW 351

Query: 232 GIGSAVQLDSPKSVHK-TPQLI 252
           G G++ QL + + V + TP LI
Sbjct: 352 GRGTSGQLGNGEIVDRNTPVLI 373



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 104/252 (41%), Gaps = 31/252 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS+AL     + +WG    GQLG    D + + +P  + G  +  +     G  H 
Sbjct: 21  AGASHSVALLTGNVLCSWGRGEDGQLG--HGDAEDRLVPTVLSGFDAPGITSVICGADHT 78

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +            D  +V++WG    G+LG    +      P+ VK L  + + Q  
Sbjct: 79  TAYS-----------EDELQVYSWGWGDFGRLG--HGNSSDVFTPQPVKALQGLKIKQIA 125

Query: 122 AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITS 167
            G SHCL +T +G V    +      G G+             +GV   ++        +
Sbjct: 126 CGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTAA 185

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           +   G+LY WG   YG +G+ + N  +  P++V S+    + L+ACG  H+  +S S   
Sbjct: 186 VTEDGDLYGWGWGRYGNLGLGDRNDRLL-PEKVSSVEGEKMVLVACGWRHTITVSDS-GN 243

Query: 228 LYAFGIGSAVQL 239
           LY +G     QL
Sbjct: 244 LYTYGWSKYGQL 255



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 16/129 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++ ++D G ++T+G   +GQLG    D +   +P +++ L   ++ Q   G+ H +
Sbjct: 231 GWRHTITVSDSGNLYTYGWSKYGQLG--HGDFEDHLVPHKLEALKDSTISQISGGWRHTM 288

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            LTS             G+++ WG +  GQ+G+ + D      P +V       + Q   
Sbjct: 289 ALTSE------------GKLYGWGWNKFGQVGVGNNDDHCS--PVQVHFPEDQKISQVAC 334

Query: 123 GYSHCLVLT 131
           G+ H L L+
Sbjct: 335 GWRHTLALS 343


>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
          Length = 1699

 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 107/245 (43%), Gaps = 56/245 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H +AL D G  ++WG +  GQLG E+   K   +PK ++ L    +  A   Y H  
Sbjct: 424 GCEHMIALTDTGLAYSWGYNDRGQLGHENLATKIH-VPKLIESLKDKKLGFASVSYHHSA 482

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V+T            D GE++T+G +  GQLGL+    + QS P+ VK L +  V     
Sbjct: 483 VIT------------DAGELYTFGMNDCGQLGLDHT--QHQSTPQLVKSLEATEVSMVAC 528

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H ++ T++                                      GEL+T G N+Y
Sbjct: 529 GLYHTIICTAA--------------------------------------GELFTCGKNDY 550

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G+ + N  +  P  V +L N  ++ +ACG  HS V+S    R ++FG     QL   
Sbjct: 551 GQLGLAH-NRQIKLPTLV-ALPNEMVSFVACGYYHSVVVSTG-GRAFSFGRNDYGQLGIG 607

Query: 243 KSVHK 247
             VH+
Sbjct: 608 SKVHQ 612



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 33/200 (16%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV-VQACAGYSHCLVL 64
           HS  + D GE++T+G +  GQLGL+    + QS P+ VK L +  V + AC         
Sbjct: 480 HSAVITDAGELYTFGMNDCGQLGLDHT--QHQSTPQLVKSLEATEVSMVAC--------- 528

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               GL+H++     GE+FT G + +GQLGL  A  +   +P  V     +    AC GY
Sbjct: 529 ----GLYHTIICTAAGELFTCGKNDYGQLGL--AHNRQIKLPTLVALPNEMVSFVAC-GY 581

Query: 125 SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTITS----------LNS 170
            H +V+++ G      + +    G GS   Q V + +   S+T +            L+ 
Sbjct: 582 YHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSE 641

Query: 171 PGELYTWGNNEYGQMGINNS 190
            G++Y +G N  GQ+G   S
Sbjct: 642 QGQVYVFGRNNKGQLGNRGS 661



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 34/210 (16%)

Query: 80  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS------VVQACAGYSHCLVLTSS 133
           GE+++ G +++G+LG     ++ Q        L SVS      + Q  +G     VLT+ 
Sbjct: 328 GELYSCGQNSYGELGTGDDIERHQ--------LTSVSLCGWDDIRQVVSGNETLAVLTNE 379

Query: 134 GVV-TCTHKENG-CGSD----------PSQGVQSNLVQ-----DSHTTITSLNSPGELYT 176
           GVV TC   ++G CG            P Q ++S  V+     +    + +L   G  Y+
Sbjct: 380 GVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYS 439

Query: 177 WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
           WG N+ GQ+G  N  T +  P+ +ESL +  +   +   +HS V++ +   LY FG+   
Sbjct: 440 WGYNDRGQLGHENLATKIHVPKLIESLKDKKLGFASVSYHHSAVITDA-GELYTFGMNDC 498

Query: 237 VQLDSPKSVHK-TPQLIHGPWIASPVAMTA 265
            QL    + H+ TPQL+     A+ V+M A
Sbjct: 499 GQLGLDHTQHQSTPQLVKS-LEATEVSMVA 527



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 17/141 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL+H++     GE+FT G + +GQLGL  A  +   +P  V     +    AC       
Sbjct: 529 GLYHTIICTAAGELFTCGKNDYGQLGL--AHNRQIKLPTLVALPNEMVSFVAC------- 579

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G +HS+ ++  G  F++G + +GQLG+ S  K  Q++P  V   ++  +V+A  
Sbjct: 580 ------GYYHSVVVSTGGRAFSFGRNDYGQLGIGS--KVHQNVPNVVALSSNTRMVRATC 631

Query: 123 GYSHCLVLTSSGVVTCTHKEN 143
           G  H ++L+  G V    + N
Sbjct: 632 GCYHTVLLSEQGQVYVFGRNN 652



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 58/108 (53%), Gaps = 14/108 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HS+ ++  G  F++G + +GQLG+ S  K  Q++P  V   ++  +V+A        
Sbjct: 580 GYYHSVVVSTGGRAFSFGRNDYGQLGIGS--KVHQNVPNVVALSSNTRMVRA-------- 629

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK 110
               T G +H++ L++ G+V+ +G +  GQLG   +      +P +V+
Sbjct: 630 ----TCGCYHTVLLSEQGQVYVFGRNNKGQLGNRGSADALLPVPLKVR 673


>gi|7406983|gb|AAF61856.1|AF189221_1 HERC2 [Drosophila melanogaster]
          Length = 743

 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 106/236 (44%), Gaps = 29/236 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS A+   G V TWG   +G+LG    D + Q  PK V+ L     +    G     
Sbjct: 27  GSAHSAAITASGHVLTWGKGRYGRLG--HGDSEDQLRPKLVEALLGYRAIDIACG----- 79

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +L + D   V++WG   +G+LG   +D     +P +++ LA + VV+   
Sbjct: 80  -----SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD--GCKLPYKIESLAGLGVVKVEC 132

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGS-----DPS-----QGVQSNLVQDSHTTITSL 168
           G    + LT SG V    K +    G GS      P      QG +   +        + 
Sbjct: 133 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVAC 192

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
           +  GE+YTWG+N+ GQ+G + + T +  P+ V +L    I  + CG+ H+  LS S
Sbjct: 193 SDSGEVYTWGDNDEGQLG-DGTVTAIQWPRLVTALQGKHIVKVTCGSAHTLALSTS 247



 Score = 43.9 bits (102), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 6/68 (8%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYS 59
           TG  H +A +D GEV+TWG +  GQLG    D    +I  P+ V  L    +V+   G +
Sbjct: 184 TGSLHCVACSDSGEVYTWGDNDEGQLG----DGTVTAIQWPRLVTALQGKHIVKVTCGSA 239

Query: 60  HCLVLTST 67
           H L L+++
Sbjct: 240 HTLALSTS 247


>gi|47226892|emb|CAG05784.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 557

 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 97/230 (42%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL D GEV+ WG +  GQ+G  S    +Q  P+RV       V           
Sbjct: 151 GSHHSMALTDSGEVYAWGYNNCGQVG--SGSTANQPTPRRVSSCLQNRV----------- 197

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            ++   G   SLA+ D GEV+ WG + +GQLGL   +  +Q  P R+  L  + V Q  +
Sbjct: 198 AVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGL--GNNGNQLTPCRLVALQGLCVQQIVS 255

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 256 GYAHSLALTDEGL--------------------------------------LYAWGANTY 277

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N +  ++ P ++ +     + + AC + H+        ++Y +G
Sbjct: 278 GQLGTGNKSNQLS-PVQIMTEKERIVEIAACHSTHTSAAKTQSGQVYMWG 326



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 2/82 (2%)

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           GEL+ WG+N Y Q+G   +N  V       +L+N  +  +ACG++HS  L+ S   +YA+
Sbjct: 109 GELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDS-GEVYAW 167

Query: 232 GIGSAVQLDSPKSVHK-TPQLI 252
           G  +  Q+ S  + ++ TP+ +
Sbjct: 168 GYNNCGQVGSGSTANQPTPRRV 189



 Score = 40.0 bits (92), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 13/86 (15%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           ++G  HSLAL D G ++ WG +T+GQLG  + +K +Q  P ++       V  A    +H
Sbjct: 254 VSGYAHSLALTDEGLLYAWGANTYGQLG--TGNKSNQLSPVQIMTEKERIVEIAACHSTH 311

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWG 86
                       S A    G+V+ WG
Sbjct: 312 T-----------SAAKTQSGQVYMWG 326


>gi|261194928|ref|XP_002623868.1| ubiquitin-protein ligase [Ajellomyces dermatitidis SLH14081]
 gi|239587740|gb|EEQ70383.1| ubiquitin-protein ligase [Ajellomyces dermatitidis SLH14081]
 gi|239610765|gb|EEQ87752.1| ubiquitin-protein ligase [Ajellomyces dermatitidis ER-3]
 gi|327348791|gb|EGE77648.1| ubiquitin-protein ligase [Ajellomyces dermatitidis ATCC 18188]
          Length = 1212

 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 110/239 (46%), Gaps = 31/239 (12%)

Query: 857  RKLSFCLQVLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRK--VAYTAFYMPDLAT 914
            R  +  + +L   N+L +      I  GG  +  +       GR+  +   AFY   L  
Sbjct: 722  RAAAKVMALLFSANNLFHNRKRDGIRPGGEEILRLEG----QGRRHLIPINAFYN-TLLD 776

Query: 915  VCDIRIDYFRWISGRPNGSTRDF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYL 973
              D+  D+  W      G    F  C Y F     AK  +LE D R QME    +     
Sbjct: 777  YSDLIPDFEAW-----EGRIGQFSFCQYSFFLSIWAKIRILEHDARRQMEEKAREA---F 828

Query: 974  FLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYT---TNDFKKPLKVNDTSPIYLAPQV 1030
            F        ++QYL ++V R+ + ED++R +++       + KK L++            
Sbjct: 829  FDSILGRRGVSQYLVLKVRRECLAEDSLRSVSEVVGTGEGEIKKGLRI------------ 876

Query: 1031 KFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            +F GEE  DAGG+R+E+ +LL++EI DP +G+F   E+++  +F+   FE    +FL+G
Sbjct: 877  EFLGEEGVDAGGLRKEWFLLLVREIFDPLHGLFVYDEQSQYCYFNPYCFESSEQFFLVG 935



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 21/124 (16%)

Query: 726  EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL------DEPIL 779
            E+++  +F+   FE     FL+G L GLAIYN TI+++  P   ++K+L      + P L
Sbjct: 913  EQSQYCYFNPYCFESSEQFFLVGVLLGLAIYNSTILDIALPPFAFRKLLACAPPNNVPTL 972

Query: 780  ----------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYFERLI 829
                      L+DL +  PTLAK L+D+L Y + D+++ F + F    ++  + Y E+L+
Sbjct: 973  STPQQTFKCTLEDLAEYQPTLAKGLRDLLTY-DGDVQETFCLDF----VVQIERYGEKLV 1027

Query: 830  LIFK 833
            +  +
Sbjct: 1028 VPLR 1031


>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Oreochromis niloticus]
          Length = 536

 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 98/245 (40%), Gaps = 56/245 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++AL   GEV+ WG +  GQ+G  S    +Q  P+RV       VV   A    C 
Sbjct: 145 GSHHTIALTTDGEVYAWGYNNSGQVG--SGSTANQPTPRRVSSCLQNKVVVNIACGQLC- 201

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ D GE++ WG + +GQLGL   +  +Q  P R+  L  V++VQ   
Sbjct: 202 ----------SMAVLDNGEIYGWGYNCNGQLGL--GNNGNQQTPCRIAALQGVNIVQVAC 249

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G V                                      Y WG N Y
Sbjct: 250 GYAHTLALTDEGFV--------------------------------------YAWGANSY 271

Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           GQ+G  N SN  +  P   +    + +A  AC  +H+        ++  +G      + S
Sbjct: 272 GQLGTGNKSNQALPTPINTDKERIVEVA--ACHTSHTSAAKTQSGQVLMWGQCRGQAVAS 329

Query: 242 PKSVH 246
           P   H
Sbjct: 330 PHLTH 334



 Score = 50.1 bits (118), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 95/233 (40%), Gaps = 57/233 (24%)

Query: 8   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTST 67
           + +ND  EVF  G +  G LGL   D +S   P+R+  L    +V           L+  
Sbjct: 46  VTVND--EVFALGTNCSGCLGL--GDLQSTIEPRRIDVLCGKKIVS----------LSYG 91

Query: 68  TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 127
           TG    +A  D GEV+ WG + + QLG  + +           GL               
Sbjct: 92  TGPHVVIATAD-GEVYAWGHNGYSQLGNGTTNH----------GLTPA------------ 128

Query: 128 LVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGI 187
             L S+ +++    E  CGS              H TI +L + GE+Y WG N  GQ+G 
Sbjct: 129 --LVSTNLLSKRVTEVACGS--------------HHTI-ALTTDGEVYAWGYNNSGQVG- 170

Query: 188 NNSNTTVTKPQRVES-LVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           + S      P+RV S L N  +  IACG   S  +  +   +Y +G     QL
Sbjct: 171 SGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDN-GEIYGWGYNCNGQL 222



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 43/180 (23%)

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
           + +ND  EVF  G +  G LGL   D +S   P+R+                   VL   
Sbjct: 46  VTVND--EVFALGTNCSGCLGL--GDLQSTIEPRRID------------------VLCGK 83

Query: 134 GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            +V+ ++     G+ P            H  I +  + GE+Y WG+N Y Q+G   +N  
Sbjct: 84  KIVSLSY-----GTGP------------HVVIAT--ADGEVYAWGHNGYSQLGNGTTNHG 124

Query: 194 VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
           +T      +L++  +  +ACG++H+  L+     +YA+G  ++ Q+ S  + ++ TP+ +
Sbjct: 125 LTPALVSTNLLSKRVTEVACGSHHTIALTTD-GEVYAWGYNNSGQVGSGSTANQPTPRRV 183


>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
          Length = 658

 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 129/267 (48%), Gaps = 45/267 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G+  S AL + G+++TWG + +GQLG    D+ S +IP+ +  +    V     G +H +
Sbjct: 169 GVAFSAALMEGGQLYTWGCNRYGQLG--QGDRTSSAIPRMLPSMNHRHVHLMACGAAHIV 226

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           VLT++             +V+TWG +++GQLG     KK    PK V+ ++ + + Q  A
Sbjct: 227 VLTTSR------------DVYTWGNNSYGQLG-HGFRKKHCLQPKSVRVMSGLDIKQIVA 273

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGV-----------QSNLVQDSHTTITS 167
           G +H  V+TS G +    + +    G G   S+ +           Q++L+      I +
Sbjct: 274 GENHSCVMTSFGDIYTWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADFIMA 333

Query: 168 LNSPGELYTWGNNEYGQMG------INNSN---TTVTKPQRV------ESLVNLPIALIA 212
           +   G +Y+WG N +GQ+G       + SN   + V  P+ +      E    + ++ I+
Sbjct: 334 MTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSIS 393

Query: 213 CGANHSFVLSKSVSRLYAFGIGSAVQL 239
           CG++H   +++    L+A+G G   QL
Sbjct: 394 CGSHHVLAITEKKDTLFAWGRGEHGQL 420



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 100/235 (42%), Gaps = 57/235 (24%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHCLVL 64
           H LAL+  G++ +WG    GQLG   A     S P  +  LAS  V + AC         
Sbjct: 120 HVLALDASGKIRSWGRGESGQLG--HASFSHSSTPSIIDELASQRVKEVAC--------- 168

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G+  S AL + G+++TWG + +GQLG    D+ S +IP+ +  +    V     G 
Sbjct: 169 ----GVAFSAALMEGGQLYTWGCNRYGQLG--QGDRTSSAIPRMLPSMNHRHVHLMACGA 222

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
           +H +VLT+S                                       ++YTWGNN YGQ
Sbjct: 223 AHIVVLTTS--------------------------------------RDVYTWGNNSYGQ 244

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           +G         +P+ V  +  L I  I  G NHS V++ S   +Y +G G   QL
Sbjct: 245 LGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMT-SFGDIYTWGRGDFGQL 298



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 59/279 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H + L    +V+TWG +++GQLG     KK    PK V+ ++ + + Q  AG +H  
Sbjct: 221 GAAHIVVLTTSRDVYTWGNNSYGQLG-HGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSC 279

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLG---LESADKKSQSIPKRVKGLASVSVVQ 119
           V+TS             G+++TWG    GQLG   +ES D  +   P   K  AS+ V  
Sbjct: 280 VMTS------------FGDIYTWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIV-- 325

Query: 120 ACAGYSHCLVLTSSGVVTCTHK----ENGCGSD---------PSQGVQSNLVQ------- 159
             +G    + +T SG V    +    + G G D         PS  +   ++        
Sbjct: 326 --SGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEE 383

Query: 160 -----------DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTK-PQRVESLVNLP 207
                       SH  +        L+ WG  E+GQ+G++  +T+    PQ V+ +  + 
Sbjct: 384 HDAISLSSISCGSHHVLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMI 443

Query: 208 IALIACGANHSFVLS-------KSVSRLYAFGIGSAVQL 239
           +   AC  NHS V++       K   +++++G GS  QL
Sbjct: 444 VLAAACSENHSVVVATMPGSGPKGDMKVFSWGRGSFGQL 482



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 33/192 (17%)

Query: 8   LALNDCGEVFTWGGDTHGQLG--LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +A+   G V++WG +  GQLG  ++    KS   P  V     +S   A   +    + +
Sbjct: 332 MAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSS 391

Query: 66  STTGLWHSLALNDCGE-VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
            + G  H LA+ +  + +F WG   HGQLGL+  D   + IP+ VK +  + V+ A    
Sbjct: 392 ISCGSHHVLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSE 451

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
           +H +V+ +                P  G + ++               ++++WG   +GQ
Sbjct: 452 NHSVVVATM---------------PGSGPKGDM---------------KVFSWGRGSFGQ 481

Query: 185 MGINNSNTTVTK 196
           +G  +    V K
Sbjct: 482 LGYGSGKVPVMK 493



 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 5/97 (5%)

Query: 3   GLWHSLALNDCGE-VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           G  H LA+ +  + +F WG   HGQLGL+  D   + IP+ VK +  + V+ A    +H 
Sbjct: 395 GSHHVLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHS 454

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESA 98
           +V+ +  G   S    D  +VF+WG  + GQLG  S 
Sbjct: 455 VVVATMPG---SGPKGDM-KVFSWGRGSFGQLGYGSG 487



 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 16/148 (10%)

Query: 106 PKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC---------THKENGCGSDPS--QGVQ 154
           P+ V  LA +S+     G  H L L +SG +            H      S PS    + 
Sbjct: 100 PQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHASFSHSSTPSIIDELA 159

Query: 155 SNLVQDSHTTI---TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALI 211
           S  V++    +    +L   G+LYTWG N YGQ+G  +  T+   P+ + S+ +  + L+
Sbjct: 160 SQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGD-RTSSAIPRMLPSMNHRHVHLM 218

Query: 212 ACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           ACGA H  VL+ S   +Y +G  S  QL
Sbjct: 219 ACGAAHIVVLTTSRD-VYTWGNNSYGQL 245


>gi|440898467|gb|ELR49962.1| RCC1 and BTB domain-containing protein 1 [Bos grunniens mutus]
          Length = 531

 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 96/244 (39%), Gaps = 54/244 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A      
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA------ 187

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V Q   
Sbjct: 188 -----CGQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVNQIVC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 241 GYAHTLALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G  N N  ++ P  +       I + AC + H+         +Y +G      +  P
Sbjct: 263 GQLGTGNKNNLLS-PAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLP 321

Query: 243 KSVH 246
              H
Sbjct: 322 HLTH 325



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 74/182 (40%), Gaps = 43/182 (23%)

Query: 73  SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLT 131
           +L + D  EVF +G +    LG  + D  S  +PK+++ L    +     G   H L+ T
Sbjct: 34  ALYVTDSDEVFVFGLNYSSCLG--TGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91

Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
             GVV                                      Y WG+N Y Q+G   +N
Sbjct: 92  EDGVV--------------------------------------YAWGHNGYSQLGNGTTN 113

Query: 192 TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQ 250
             +   Q   +L+   +  +ACG++HS  L+     ++A+G  +  Q+ S  + ++ TP+
Sbjct: 114 QGLAPIQVCTNLLIKQVVEVACGSHHSMALAAD-GEVFAWGYNNCGQVGSGSTANQPTPR 172

Query: 251 LI 252
            +
Sbjct: 173 KV 174


>gi|269793976|ref|YP_003313431.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Sanguibacter keddieii DSM 10542]
 gi|269096161|gb|ACZ20597.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Sanguibacter keddieii DSM 10542]
          Length = 737

 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 152/333 (45%), Gaps = 65/333 (19%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+  G VF WG +  G+LG     +  +S P RV GL +   V+  +G  +  
Sbjct: 205 GARHSLALDSEGNVFAWGRNGFGELG--DGTRVDRSTPVRVGGLLAEQPVERISGGGN-- 260

Query: 63  VLTSTTGL-WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGL-ASVSVVQA 120
             T+  G+  +SLAL   G V+TWG    G+LG+ ++   S + P  V GL A   +V A
Sbjct: 261 --TTDAGIQGNSLALGANGRVYTWGAGERGRLGIGTS-PASIATPALVGGLIADQHIVDA 317

Query: 121 CAGYSHCLVLTSSGVV----TCTHKENGCGSDPS-------------QGVQSNLVQDSHT 163
             G ++ +VL+S G +      ++   G G+  +              GV  + V     
Sbjct: 318 SFGTNNAVVLSSDGRLFSWGDGSYGALGNGTTTTSASPVAVTMTGVLSGVSISQVDAGQL 377

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRV-----ESLVNLPIALIACGANHS 218
              + +  GEL+TWG N  GQ+G N + +  T P RV     E+L N P   I   A  +
Sbjct: 378 GSIARSVTGELFTWGWNNAGQIG-NGTTSNSTVPTRVDMGALEALGNRP---IQASAGPA 433

Query: 219 FVLS-KSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGL 277
           F ++  +  RL A+G+ ++ QL +  +V+ +           PVA+              
Sbjct: 434 FYMALGADGRLAAWGLNTSGQLGAGTNVNAS----------RPVAVR------------- 470

Query: 278 VVKKIYSGGDHSIVTVTKSSDG---VLSDDFRV 307
            V  +  G +  I+ VT SS G    L+DD RV
Sbjct: 471 -VDGVMVGAN--IIQVTNSSSGTTLALADDGRV 500



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 117/260 (45%), Gaps = 54/260 (20%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L L+  G+++ WG ++ GQLG  +    +  +P  + G+ + S + A A         
Sbjct: 153 HGLYLDSKGQIWAWGLNSSGQLGNGTRASSTTPVPVDMTGVMANSEMVAVA--------- 203

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HSLAL+  G VF WG +  G+LG     +  +S P RV GL +   V+      
Sbjct: 204 --AGARHSLALDSEGNVFAWGRNGFGELG--DGTRVDRSTPVRVGGLLAEQPVE------ 253

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                          + +G G+    G+Q N +        +L + G +YTWG  E G++
Sbjct: 254 ---------------RISGGGNTTDAGIQGNSL--------ALGANGRVYTWGAGERGRL 290

Query: 186 GINNSNTTVTKPQRVESLV-NLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           GI  S  ++  P  V  L+ +  I   + G N++ VLS S  RL+++G GS   L +  +
Sbjct: 291 GIGTSPASIATPALVGGLIADQHIVDASFGTNNAVVLS-SDGRLFSWGDGSYGALGNGTT 349

Query: 245 VHKTPQLIHGPWIASPVAMT 264
                        ASPVA+T
Sbjct: 350 TTS----------ASPVAVT 359


>gi|118345495|ref|XP_976578.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89287995|gb|EAR85983.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 722

 Score = 86.7 bits (213), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 87/202 (43%), Gaps = 56/202 (27%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HS A+ + G ++TWG D++GQLG   A  K+   PK V+ L +  +V    G  H L
Sbjct: 274 GSFHSAAITNNGRLYTWGRDSNGQLGHGQA--KADIFPKEVQALQNTYIVSVACGEGHTL 331

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            L+               E+F+WG ++ GQLG  S + KS S PK++      S+ Q   
Sbjct: 332 ALSKNN------------ELFSWGLNSSGQLGRASENLKS-SDPKKISFFEDKSIKQIAC 378

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H LVL   G V                                      Y+WG+N+Y
Sbjct: 379 GSKHSLVLLQDGTV--------------------------------------YSWGSNQY 400

Query: 183 GQMGIN---NSNTTVTKPQRVE 201
           GQ+G +   N+  T+   Q V+
Sbjct: 401 GQLGFDQDSNAQNTIASSQNVD 422



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 104/233 (44%), Gaps = 54/233 (23%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           ++A++  G +F+WG     +LG + A+  +Q  P +++ L+   ++Q             
Sbjct: 225 TIAIDKQGRIFSWGKGGFNRLGYK-AEIVNQKHPLQIESLSKQQIIQF------------ 271

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
           + G +HS A+ + G ++TWG D++GQLG   A  K+   PK V+ L +  +V    G  H
Sbjct: 272 SLGSFHSAAITNNGRLYTWGRDSNGQLGHGQA--KADIFPKEVQALQNTYIVSVACGEGH 329

Query: 127 CLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG 186
            L L+ +                                       EL++WG N  GQ+G
Sbjct: 330 TLALSKNN--------------------------------------ELFSWGLNSSGQLG 351

Query: 187 INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
             + N   + P+++    +  I  IACG+ HS VL +  + +Y++G     QL
Sbjct: 352 RASENLKSSDPKKISFFEDKSIKQIACGSKHSLVLLQDGT-VYSWGSNQYGQL 403



 Score = 48.5 bits (114), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 46/273 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGL--ESADKKSQS-IPKRVKGLASVSVVQACAGYS 59
           G  HS A++   EV+ WG +   +LGL  E  ++  Q+ IP+++K    V+ +      S
Sbjct: 36  GANHSYAIDTNFEVYAWGCNLGRKLGLSDEYYNQIFQADIPEQIKIPVKVTEL------S 89

Query: 60  HCLVLTSTTGLWHSLALN-DCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVV 118
           +  +   +TG  HS A + +  +V+ WG   +G+LG  + + K    P+   GL     +
Sbjct: 90  NKKINNISTGTNHSFAWSTELNQVYCWGIGEYGKLG--NKESKDLQYPEIFNGLKQPEGI 147

Query: 119 Q------ACAGYSHCLVLTSSGVVTCTHKEN-----GCGSDPSQGVQSNL---------- 157
           Q      +C G +H + +     V  +  +N     G  SD   G+ +            
Sbjct: 148 QWEISEISC-GENHTVAVIKQINVNNSQSQNKLYVWGSSSDWQLGIDTGKTDYVNQPLEM 206

Query: 158 -----------VQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNL 206
                      V+       +++  G +++WG   + ++G          P ++ESL   
Sbjct: 207 SPDYWEGNVESVKACSDFTIAIDKQGRIFSWGKGGFNRLGYKAEIVNQKHPLQIESLSKQ 266

Query: 207 PIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
            I   + G+ HS  ++ +  RLY +G  S  QL
Sbjct: 267 QIIQFSLGSFHSAAITNN-GRLYTWGRDSNGQL 298


>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
           DW4/3-1]
 gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
           DW4/3-1]
          Length = 860

 Score = 86.7 bits (213), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 133/281 (47%), Gaps = 43/281 (15%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           TG  HS+A+   G ++ WG +  GQLG+      ++ IP +  GLAS+S +   AG S  
Sbjct: 468 TGDGHSVAVGSDGGIWAWGDNRRGQLGI--GITATREIPVQATGLASISAL--AAGDS-- 521

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                     HSLAL   G V+TWG + +GQLG  +A  ++ +   +V GL  ++ +   
Sbjct: 522 ----------HSLALRGNGSVWTWGSNAYGQLGDGTAIDRATA--AQVPGLTDITAL--A 567

Query: 122 AGYSHCLVLTSSGVV--------------TCTHKENGCGSDPSQGVQSNLVQDSHTTITS 167
           AG  H L L + G V              T T ++          +++     +H+    
Sbjct: 568 AGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKTPVQVSGLSAMRAVEAGPAHSVAVH 627

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           LN  G ++ WGNN++GQ+G + + T+   P +V  L    +  +A G  HS  L ++   
Sbjct: 628 LN--GTVWVWGNNDFGQLG-DGTVTSRAMPVQVSGLTG--VTAVAVGVYHSLAL-RNDGT 681

Query: 228 LYAFGIGSAVQLDSPKS-VHKTPQLIHGPWIASPVAMTAGE 267
           L+A+G  +  QL +  S +  TP  +  P +   +A+ AG 
Sbjct: 682 LWAWGYNNVGQLGNGTSGIQSTPAQV--PGLTGVIALAAGN 720



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 139/347 (40%), Gaps = 83/347 (23%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LAL   G V+ WG +  GQLG  +A  +  + P +V GL SV  V A           
Sbjct: 155 HTLALRRDGTVWAWGFNGSGQLGNGTATDR--ATPVQVPGLTSVMAVAASEA-------- 204

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 HSLAL   G V+ WG + +GQLG     K  ++ P +V GLA V+ +   AG +
Sbjct: 205 ------HSLALRSDGTVWAWGDNGYGQLG--DGTKAQRTTPVQVLGLAGVTAL--AAGGN 254

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
              V  S                            +H+   +L S G ++ WG+N  GQ+
Sbjct: 255 GTTVAIS----------------------------AHS--LALRSDGTVWAWGDNSAGQL 284

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL-DSPKS 244
           G     TT  +   V+ L    +  +A GA HS  L +    ++A+G  S+ QL D   +
Sbjct: 285 G---DGTTTERATPVQVLGLTSVTALAAGAFHSLAL-RDDGTVWAWGNNSSGQLGDGTTT 340

Query: 245 VHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV---- 300
              TP  + G      VA   G+DSL               GDHS+      SDG     
Sbjct: 341 ARPTPVQVPGLTSVIAVAAGGGDDSLGMR------------GDHSLAL---KSDGTVWAW 385

Query: 301 ---LSDDFRVLNPATQILDVNFERLKECEREVEQ------LKSDETL 338
              LS  F    PAT+   V    L      V        LKSD T+
Sbjct: 386 GYNLSRQFGDGMPATRTTPVQVSELTGGTALVAGDLHAVVLKSDGTV 432



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 111/248 (44%), Gaps = 45/248 (18%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL   G V+ WG ++ GQLG  +  +++   P +V GL SV+ + A           
Sbjct: 263 HSLALRSDGTVWAWGDNSAGQLGDGTTTERA--TPVQVLGLTSVTALAA----------- 309

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG-- 123
              G +HSLAL D G V+ WG ++ GQLG       ++  P +V GL SV  V A  G  
Sbjct: 310 ---GAFHSLALRDDGTVWAWGNNSSGQLG--DGTTTARPTPVQVPGLTSVIAVAAGGGDD 364

Query: 124 -----YSHCLVLTSSGVVTC----THKENGCG-----SDPSQ-----GVQSNLVQDSHTT 164
                  H L L S G V        ++ G G     + P Q     G  + +  D H  
Sbjct: 365 SLGMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATRTTPVQVSELTGGTALVAGDLHAV 424

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
           +  L S G ++ WG+N  GQ+G         KP +V  L    I  +A G  HS  +  S
Sbjct: 425 V--LKSDGTVWAWGDNSSGQLG-EGVTPVRAKPMQVSGLA--AITALATGDGHSVAVG-S 478

Query: 225 VSRLYAFG 232
              ++A+G
Sbjct: 479 DGGIWAWG 486



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 123/257 (47%), Gaps = 40/257 (15%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL + G V+ WG +  GQLG       S+  P +V GL+++  V+A           
Sbjct: 572 HSLALRNDGTVWVWGSNDFGQLG--DGTVTSRKTPVQVSGLSAMRAVEA----------- 618

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+A++  G V+ WG +  GQLG       S+++P +V GL  V+ V    G  
Sbjct: 619 ---GPAHSVAVHLNGTVWVWGNNDFGQLG--DGTVTSRAMPVQVSGLTGVTAV--AVGVY 671

Query: 126 HCLVLTSSG---------VVTCTHKENGCGSDPSQ-----GVQSNLVQDSHTTITSLNSP 171
           H L L + G         V    +  +G  S P+Q     GV +    + H+   +L + 
Sbjct: 672 HSLALRNDGTLWAWGYNNVGQLGNGTSGIQSTPAQVPGLTGVIALAAGNGHS--LALRTD 729

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G ++ WG N +GQ+G + + T  + P +V  L N+ IAL A GA ++  L +S   ++ +
Sbjct: 730 GTVWGWGANSFGQLG-DGTTTPRSTPTQVPGLTNV-IALNA-GAFYTVAL-RSERSVWEW 785

Query: 232 GIGSAVQLDSPKSVHKT 248
           G  SA QL       KT
Sbjct: 786 GSKSAGQLGDGTVTQKT 802



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 116/260 (44%), Gaps = 33/260 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL D G V+ WG ++ GQLG       ++  P +V GL SV  V A  G     
Sbjct: 310 GAFHSLALRDDGTVWAWGNNSSGQLG--DGTTTARPTPVQVPGLTSVIAVAAGGGDDSLG 367

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           +        HSLAL   G V+ WG +   Q G       +++ P +V  L   + +   A
Sbjct: 368 MRGD-----HSLALKSDGTVWAWGYNLSRQFG--DGMPATRTTPVQVSELTGGTAL--VA 418

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----------SDPSQ-----GVQSNLVQDSHTTITS 167
           G  H +VL S G V     +N  G          + P Q      + +    D H+   +
Sbjct: 419 GDLHAVVLKSDGTV-WAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITALATGDGHS--VA 475

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           + S G ++ WG+N  GQ+GI     T T+   V++     I+ +A G +HS  L  + S 
Sbjct: 476 VGSDGGIWAWGDNRRGQLGI---GITATREIPVQATGLASISALAAGDSHSLALRGNGS- 531

Query: 228 LYAFGIGSAVQLDSPKSVHK 247
           ++ +G  +  QL    ++ +
Sbjct: 532 VWTWGSNAYGQLGDGTAIDR 551



 Score = 61.6 bits (148), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 89/195 (45%), Gaps = 30/195 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G++HSLAL + G ++ WG +  GQLG  +     QS P +V GL  V  + A  G     
Sbjct: 669 GVYHSLALRNDGTLWAWGYNNVGQLG--NGTSGIQSTPAQVPGLTGVIALAAGNG----- 721

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HSLAL   G V+ WG ++ GQLG        +S P +V GL +V  + A A
Sbjct: 722 ---------HSLALRTDGTVWGWGANSFGQLG--DGTTTPRSTPTQVPGLTNVIALNAGA 770

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSH-TTITSLNSPGE-------- 173
            Y+  L    S V     K  G   D +   ++  VQ S  T +T+L +           
Sbjct: 771 FYTVALRSERS-VWEWGSKSAGQLGDGTVTQKTTPVQVSGLTDVTALAAGNAHALALRTD 829

Query: 174 --LYTWGNNEYGQMG 186
             ++ WG N+ GQ+G
Sbjct: 830 RTVWAWGGNQRGQIG 844


>gi|348686412|gb|EGZ26227.1| hypothetical protein PHYSODRAFT_486876 [Phytophthora sojae]
          Length = 289

 Score = 86.7 bits (213), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 65/198 (32%), Positives = 94/198 (47%), Gaps = 34/198 (17%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL D G V  WG +   Q  + SA +    +P  V+    V +VQ  AG  H L L 
Sbjct: 89  HVLALTDSGRVVAWGWNASAQAAV-SAGEDVVRVPTVVEFPTPVQIVQVAAGGMHSLALD 147

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           S+ G+W             WG +  GQLG+ S + ++Q  P+RV   A + V    AG++
Sbjct: 148 SSGGVW------------AWGCNEFGQLGINS-EVETQHSPRRVALSAEIRVRDIAAGWA 194

Query: 126 HCLVLTSSGVVTC----THKENGCGS----------DPSQGVQSNLVQ----DSHTTITS 167
           H  ++++SG V       + + G GS          D  QGV S  VQ    + HT   +
Sbjct: 195 HSALVSTSGEVFTFGWGLYNQLGHGSTQNEVEPVVVDALQGVDSEAVQVACGNWHT--AA 252

Query: 168 LNSPGELYTWGNNEYGQM 185
           L + G+LYTWG  + GQ+
Sbjct: 253 LTASGDLYTWGWGKDGQL 270



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 74/254 (29%), Positives = 110/254 (43%), Gaps = 49/254 (19%)

Query: 12  DCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLW 71
           D GEV  WG   +G+L  +SA           KG+ ++ V + C+  +         G  
Sbjct: 46  DSGEVVGWGRAFYGELPADSAVG---------KGVVTLQVSERCSAVA--------CGSN 88

Query: 72  HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
           H LAL D G V  WG +   Q  + SA +    +P  V+    V +VQ  AG  H L L 
Sbjct: 89  HVLALTDSGRVVAWGWNASAQAAV-SAGEDVVRVPTVVEFPTPVQIVQVAAGGMHSLALD 147

Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNL----------------VQD-----SHTTITSLNS 170
           SSG V       GC      G+ S +                V+D     +H+ + S  +
Sbjct: 148 SSGGVWAW----GCNEFGQLGINSEVETQHSPRRVALSAEIRVRDIAAGWAHSALVS--T 201

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESL--VNLPIALIACGANHSFVLSKSVSRL 228
            GE++T+G   Y Q+G  ++   V +P  V++L  V+     +ACG  H+  L+ S   L
Sbjct: 202 SGEVFTFGWGLYNQLGHGSTQNEV-EPVVVDALQGVDSEAVQVACGNWHTAALTAS-GDL 259

Query: 229 YAFGIGSAVQLDSP 242
           Y +G G   QL  P
Sbjct: 260 YTWGWGKDGQLVRP 273



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 15/133 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+  G V+ WG +  GQLG+ S + ++Q  P+RV   A + V    AG++H  
Sbjct: 139 GGMHSLALDSSGGVWAWGCNEFGQLGINS-EVETQHSPRRVALSAEIRVRDIAAGWAHSA 197

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS-IPKRVKGLASVSVVQAC 121
           +++++            GEVFT+G   + QLG  S   + +  +   ++G+ S +V  AC
Sbjct: 198 LVSTS------------GEVFTFGWGLYNQLGHGSTQNEVEPVVVDALQGVDSEAVQVAC 245

Query: 122 AGYSHCLVLTSSG 134
             + H   LT+SG
Sbjct: 246 GNW-HTAALTASG 257


>gi|212721370|ref|NP_001132850.1| uncharacterized protein LOC100194342 [Zea mays]
 gi|194695574|gb|ACF81871.1| unknown [Zea mays]
 gi|413924971|gb|AFW64903.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 418

 Score = 86.7 bits (213), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 118/269 (43%), Gaps = 37/269 (13%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS A+   G++F WG ++ GQLGL     K  S P +V  L  + V     G  H     
Sbjct: 127 HSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEH----- 181

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLG-------LESADKKSQSIPKRVKGLASVSVV 118
                  S+A+ + GEV +WG    G+LG       L  +   ++  P+ +K    + + 
Sbjct: 182 -------SIAVTEEGEVLSWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIK 234

Query: 119 QACAGYSHCLVLTSSGV--VTCTHKENGCGSDPSQGVQSNLVQD-----------SHTTI 165
           +  AG  H   +   G   +     E G G  P++  + N+V++            HT +
Sbjct: 235 KIAAGMLHSACIDEKGTLFIFGQKTEKGFGR-PNEEFRPNIVEEIPFSEEVACGGYHTCV 293

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +   G+LY+WG+NE G +G+  ++   +      SL  LP++ ++CG  H+ V+S   
Sbjct: 294 --VTDSGDLYSWGSNENGCLGLGGTDMVRSPEILKSSLFKLPVSKVSCGWKHTAVVSG-- 349

Query: 226 SRLYAFGIGSAVQLDSPKSVHKTPQLIHG 254
             +Y +G G A      +      QL HG
Sbjct: 350 DDIYTWGWGGANGTFFEEGHSSGGQLGHG 378



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 56/131 (42%), Gaps = 14/131 (10%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+L L   G VF  G +  GQLG+ ++       P  + G              H  V+ 
Sbjct: 75  HTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLE-PVEISGF-------------HERVVE 120

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G  HS A+   G++F WG ++ GQLGL     K  S P +V  L  + V     G  
Sbjct: 121 VSAGNHHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSE 180

Query: 126 HCLVLTSSGVV 136
           H + +T  G V
Sbjct: 181 HSIAVTEEGEV 191


>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 859

 Score = 86.7 bits (213), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 133/281 (47%), Gaps = 43/281 (15%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           TG  HS+A+   G ++ WG +  GQLG+      ++ IP +  GLAS+S +   AG S  
Sbjct: 467 TGDGHSVAVGSDGGIWAWGDNRRGQLGI--GITATREIPVQATGLASISAL--AAGDS-- 520

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                     HSLAL   G V+TWG + +GQLG  +A  ++ +   +V GL  ++ +   
Sbjct: 521 ----------HSLALRGNGSVWTWGSNAYGQLGDGTAIDRATA--AQVPGLTDITAL--A 566

Query: 122 AGYSHCLVLTSSGVV--------------TCTHKENGCGSDPSQGVQSNLVQDSHTTITS 167
           AG  H L L + G V              T T ++          +++     +H+    
Sbjct: 567 AGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKTPVQVSGLSAMRAVEAGPAHSVAVH 626

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           LN  G ++ WGNN++GQ+G + + T+   P +V  L    +  +A G  HS  L ++   
Sbjct: 627 LN--GTVWVWGNNDFGQLG-DGTVTSRAMPVQVSGLTG--VTAVAVGVYHSLAL-RNDGT 680

Query: 228 LYAFGIGSAVQLDSPKS-VHKTPQLIHGPWIASPVAMTAGE 267
           L+A+G  +  QL +  S +  TP  +  P +   +A+ AG 
Sbjct: 681 LWAWGYNNVGQLGNGTSGIQSTPAQV--PGLTGVIALAAGN 719



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 139/347 (40%), Gaps = 83/347 (23%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LAL   G V+ WG +  GQLG  +A  +  + P +V GL SV  V A           
Sbjct: 154 HTLALRRDGTVWAWGFNGSGQLGNGTATDR--ATPVQVPGLTSVMAVAASEA-------- 203

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 HSLAL   G V+ WG + +GQLG     K  ++ P +V GLA V+ +   AG +
Sbjct: 204 ------HSLALRSDGTVWAWGDNGYGQLG--DGTKAQRTTPVQVLGLAGVTAL--AAGGN 253

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
              V  S                            +H+   +L S G ++ WG+N  GQ+
Sbjct: 254 GTTVAIS----------------------------AHS--LALRSDGTVWAWGDNSAGQL 283

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL-DSPKS 244
           G     TT  +   V+ L    +  +A GA HS  L +    ++A+G  S+ QL D   +
Sbjct: 284 G---DGTTTERATPVQVLGLTSVTALAAGAFHSLAL-RDDGTVWAWGNNSSGQLGDGTTT 339

Query: 245 VHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV---- 300
              TP  + G      VA   G+DSL               GDHS+      SDG     
Sbjct: 340 ARPTPVQVPGLTSVIAVAAGGGDDSLGMR------------GDHSLAL---KSDGTVWAW 384

Query: 301 ---LSDDFRVLNPATQILDVNFERLKECEREVEQ------LKSDETL 338
              LS  F    PAT+   V    L      V        LKSD T+
Sbjct: 385 GYNLSRQFGDGMPATRTTPVQVSELTGGTALVAGDLHAVVLKSDGTV 431



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 111/248 (44%), Gaps = 45/248 (18%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL   G V+ WG ++ GQLG  +  +++   P +V GL SV+ + A           
Sbjct: 262 HSLALRSDGTVWAWGDNSAGQLGDGTTTERA--TPVQVLGLTSVTALAA----------- 308

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG-- 123
              G +HSLAL D G V+ WG ++ GQLG       ++  P +V GL SV  V A  G  
Sbjct: 309 ---GAFHSLALRDDGTVWAWGNNSSGQLG--DGTTTARPTPVQVPGLTSVIAVAAGGGDD 363

Query: 124 -----YSHCLVLTSSGVVTC----THKENGCG-----SDPSQ-----GVQSNLVQDSHTT 164
                  H L L S G V        ++ G G     + P Q     G  + +  D H  
Sbjct: 364 SLGMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATRTTPVQVSELTGGTALVAGDLHAV 423

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
           +  L S G ++ WG+N  GQ+G         KP +V  L    I  +A G  HS  +  S
Sbjct: 424 V--LKSDGTVWAWGDNSSGQLG-EGVTPVRAKPMQVSGLA--AITALATGDGHSVAVG-S 477

Query: 225 VSRLYAFG 232
              ++A+G
Sbjct: 478 DGGIWAWG 485



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 123/257 (47%), Gaps = 40/257 (15%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL + G V+ WG +  GQLG       S+  P +V GL+++  V+A           
Sbjct: 571 HSLALRNDGTVWVWGSNDFGQLG--DGTVTSRKTPVQVSGLSAMRAVEA----------- 617

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+A++  G V+ WG +  GQLG       S+++P +V GL  V+ V    G  
Sbjct: 618 ---GPAHSVAVHLNGTVWVWGNNDFGQLG--DGTVTSRAMPVQVSGLTGVTAV--AVGVY 670

Query: 126 HCLVLTSSG---------VVTCTHKENGCGSDPSQ-----GVQSNLVQDSHTTITSLNSP 171
           H L L + G         V    +  +G  S P+Q     GV +    + H+   +L + 
Sbjct: 671 HSLALRNDGTLWAWGYNNVGQLGNGTSGIQSTPAQVPGLTGVIALAAGNGHS--LALRTD 728

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G ++ WG N +GQ+G + + T  + P +V  L N+ IAL A GA ++  L +S   ++ +
Sbjct: 729 GTVWGWGANSFGQLG-DGTTTPRSTPTQVPGLTNV-IALNA-GAFYTVAL-RSERSVWEW 784

Query: 232 GIGSAVQLDSPKSVHKT 248
           G  SA QL       KT
Sbjct: 785 GSKSAGQLGDGTVTQKT 801



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 116/260 (44%), Gaps = 33/260 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL D G V+ WG ++ GQLG       ++  P +V GL SV  V A  G     
Sbjct: 309 GAFHSLALRDDGTVWAWGNNSSGQLG--DGTTTARPTPVQVPGLTSVIAVAAGGGDDSLG 366

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           +        HSLAL   G V+ WG +   Q G       +++ P +V  L   + +   A
Sbjct: 367 MRGD-----HSLALKSDGTVWAWGYNLSRQFG--DGMPATRTTPVQVSELTGGTAL--VA 417

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG----------SDPSQ-----GVQSNLVQDSHTTITS 167
           G  H +VL S G V     +N  G          + P Q      + +    D H+   +
Sbjct: 418 GDLHAVVLKSDGTV-WAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITALATGDGHS--VA 474

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           + S G ++ WG+N  GQ+GI     T T+   V++     I+ +A G +HS  L  + S 
Sbjct: 475 VGSDGGIWAWGDNRRGQLGI---GITATREIPVQATGLASISALAAGDSHSLALRGNGS- 530

Query: 228 LYAFGIGSAVQLDSPKSVHK 247
           ++ +G  +  QL    ++ +
Sbjct: 531 VWTWGSNAYGQLGDGTAIDR 550



 Score = 61.6 bits (148), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 89/195 (45%), Gaps = 30/195 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G++HSLAL + G ++ WG +  GQLG  +     QS P +V GL  V  + A  G     
Sbjct: 668 GVYHSLALRNDGTLWAWGYNNVGQLG--NGTSGIQSTPAQVPGLTGVIALAAGNG----- 720

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HSLAL   G V+ WG ++ GQLG        +S P +V GL +V  + A A
Sbjct: 721 ---------HSLALRTDGTVWGWGANSFGQLG--DGTTTPRSTPTQVPGLTNVIALNAGA 769

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSH-TTITSLNSPGE-------- 173
            Y+  L    S V     K  G   D +   ++  VQ S  T +T+L +           
Sbjct: 770 FYTVALRSERS-VWEWGSKSAGQLGDGTVTQKTTPVQVSGLTDVTALAAGNAHALALRTD 828

Query: 174 --LYTWGNNEYGQMG 186
             ++ WG N+ GQ+G
Sbjct: 829 RTVWAWGGNQRGQIG 843


>gi|452844428|gb|EME46362.1| hypothetical protein DOTSEDRAFT_70384 [Dothistroma septosporum NZE10]
          Length = 1276

 Score = 86.7 bits (213), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 22/189 (11%)

Query: 904  YTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQME 963
            +T+ +   L    D+  D+  W S R     +   C YP       K  +LE D R QME
Sbjct: 808  HTSSFYNTLLDYQDMIKDFKVWESKR----DKFAFCQYPLFLSMGTKIKVLEYDARRQME 863

Query: 964  HAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYT---TNDFKKPLKVND 1020
                +     F Q      ++    + + R+ +V+D++R++++       + KK L+V+ 
Sbjct: 864  LKAREA---YFDQVIRQRAIDGNFHLRIRRECMVDDSLRQISEAVGAGQEELKKGLRVH- 919

Query: 1021 TSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFE 1080
                       F GEE  DAGG R+E+ ++++++I DP +GMF   E++ + +F+ ++FE
Sbjct: 920  -----------FTGEEGVDAGGPRKEWFLMIVRDIFDPNHGMFIYDEDSNTCYFNANSFE 968

Query: 1081 DQNMYFLIG 1089
              + Y+L+G
Sbjct: 969  TSDQYYLVG 977



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 22/117 (18%)

Query: 718  NHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
            NH      E++ + +F+ ++FE  +  +L+G L GLAIYN TI+++ FP   ++K+L   
Sbjct: 947  NHGMFIYDEDSNTCYFNANSFETSDQYYLVGALLGLAIYNSTILDVAFPPFAFRKLLAAA 1006

Query: 778  ---------------------ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                                   L DL +  P+LA  LQ +LD+ + D+E  +   F
Sbjct: 1007 PSSITNHSNVSSLTGTKGQMTYTLSDLAEFRPSLAAGLQQLLDF-DGDVEATYCRDF 1062


>gi|344281814|ref|XP_003412672.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Loxodonta
           africana]
          Length = 531

 Score = 86.7 bits (213), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 96/244 (39%), Gaps = 54/244 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A      
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKKVVGIA------ 187

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V Q   
Sbjct: 188 -----CGQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVNQIVC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 241 GYAHTLALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G  N N  ++ P  V       + + AC + H+         +Y +G      +  P
Sbjct: 263 GQLGTGNKNNLLS-PAHVLVEKERVVEIAACHSAHTSAAKTQSGNVYMWGQCRGQSVTLP 321

Query: 243 KSVH 246
              H
Sbjct: 322 HLTH 325



 Score = 72.4 bits (176), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 95/236 (40%), Gaps = 54/236 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L   + G V+ WG + + QLG  + ++              V+ +Q C       V+ 
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-------------GVAPIQVCTNLLIKQVVE 132

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A   
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKKVVGIA--- 187

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CG   S  V  N               GE+Y WG N  GQ+
Sbjct: 188 -------------------CGQTSSMAVLDN---------------GEVYGWGYNGNGQL 213

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           G+ N+   +T P RV +L ++ +  I CG  H+  L+     LYA+G  +  QL +
Sbjct: 214 GLGNNGNQLT-PVRVAALHSVCVNQIVCGYAHTLALTDE-GLLYAWGANTYGQLGT 267



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 43/182 (23%)

Query: 73  SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLT 131
           +L + D  EVF +G +    LG  + D +S  +PK+++ L    +     G + H L+ T
Sbjct: 34  ALYVTDNDEVFVFGMNYSNCLG--TGDNQSTLVPKKLEALCGKKIKSLSYGSAPHVLLST 91

Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
             GVV                                      Y WG+N Y Q+G   +N
Sbjct: 92  EDGVV--------------------------------------YAWGHNGYSQLGNGTTN 113

Query: 192 TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQ 250
             V   Q   +L+   +  +ACG++HS  L+     ++A+G  +  Q+ S  + ++ TP+
Sbjct: 114 QGVAPIQVCTNLLIKQVVEVACGSHHSMALAAD-GEVFAWGYNNCGQVGSGSTANQPTPR 172

Query: 251 LI 252
            +
Sbjct: 173 KV 174


>gi|320163592|gb|EFW40491.1| hypothetical protein CAOG_01016 [Capsaspora owczarzaki ATCC 30864]
          Length = 2245

 Score = 86.7 bits (213), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 123/287 (42%), Gaps = 62/287 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESAD------KKSQSIPKRVKGLA-----SVSV 51
           G  H++AL+  G V+ WG    GQLGL +AD      ++ Q  P+RV+  A     S++ 
Sbjct: 118 GRDHTVALSSSGRVYAWGDAQDGQLGLPAADVASNGSRRMQLRPRRVRFHACSADNSLNA 177

Query: 52  VQACAGYS------------------------------HCLVLTSTTGLWHSLALNDCGE 81
               AG +                                ++     G  H++A++D G 
Sbjct: 178 QDPFAGSAGGDPSFLDSEHDQQQMDERNRPIGQVGAEMDVVITRIACGNSHTVAVSDDGR 237

Query: 82  VFTWGGDTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
            F+WG  T  QLG   AD  ++   P++++    + VV    G+ H L +          
Sbjct: 238 CFSWG--TGSQLG-HGADAIARCDTPRQIEKFVGIQVVAIACGHRHTLAI---------- 284

Query: 141 KENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRV 200
              G    P +    + V +  T     +   E+Y+WG  E GQ+G ++  T +  P R+
Sbjct: 285 ---GKPQGPLRIANYSFVDEQSTPRAMYHRVTEVYSWGEGEAGQLG-HSQTTDLAVPTRI 340

Query: 201 ESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP--KSV 245
           ESL N  I  +A G  HS  LS +   +YA+G GS  QL  P  KSV
Sbjct: 341 ESLQNCGILRLAAGGAHSIALSNT-GEVYAWGNGSHGQLGLPDNKSV 386



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 68/243 (27%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQACAGYSHC 61
           G  H++A++D G  F+WG  T  QLG   AD  ++   P++++    + VV    G+ H 
Sbjct: 225 GNSHTVAVSDDGRCFSWG--TGSQLG-HGADAIARCDTPRQIEKFVGIQVVAIACGHRHT 281

Query: 62  LVLTSTTG------------------LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ 103
           L +    G                  ++H +      EV++WG    GQLG   +     
Sbjct: 282 LAIGKPQGPLRIANYSFVDEQSTPRAMYHRVT-----EVYSWGEGEAGQLG--HSQTTDL 334

Query: 104 SIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHT 163
           ++P R++ L +  +++  AG +H + L+++G                             
Sbjct: 335 AVPTRIESLQNCGILRLAAGGAHSIALSNTG----------------------------- 365

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
                    E+Y WGN  +GQ+G+ + N +V+ P  V +L    I  IA G+ H+ V  +
Sbjct: 366 ---------EVYAWGNGSHGQLGLPD-NKSVSFPMPVLALRGKNIFSIAAGSVHTLVAGE 415

Query: 224 SVS 226
             S
Sbjct: 416 RTS 418



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 116/284 (40%), Gaps = 61/284 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS  +   G +FT G + HGQLGL   D  +++ P  V+         A A  +  +
Sbjct: 57  GGEHSAFVTLDGTLFTMGSNKHGQLGL--GDTLTRTEPTLVR---FDDEQDAAAAGAPVV 111

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD------KKSQSIPKRVK------ 110
           ++    G  H++AL+  G V+ WG    GQLGL +AD      ++ Q  P+RV+      
Sbjct: 112 IVAVACGRDHTVALSSSGRVYAWGDAQDGQLGLPAADVASNGSRRMQLRPRRVRFHACSA 171

Query: 111 --GLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV------QDSH 162
              L +       AG     + +         +    G     G + ++V       +SH
Sbjct: 172 DNSLNAQDPFAGSAGGDPSFLDSEHDQQQMDERNRPIG---QVGAEMDVVITRIACGNSH 228

Query: 163 TTITSLNSPGELYTWGNNE---YGQMGINNSNTTVTKPQRVESLVNLPIALIACG----- 214
           T   S +  G  ++WG      +G   I   +T    P+++E  V + +  IACG     
Sbjct: 229 TVAVSDD--GRCFSWGTGSQLGHGADAIARCDT----PRQIEKFVGIQVVAIACGHRHTL 282

Query: 215 -----------ANHSFVLSKSVSR--------LYAFGIGSAVQL 239
                      AN+SFV  +S  R        +Y++G G A QL
Sbjct: 283 AIGKPQGPLRIANYSFVDEQSTPRAMYHRVTEVYSWGEGEAGQL 326



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 36/67 (53%), Gaps = 2/67 (2%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS+AL++ GEV+ WG  +HGQLGL   D KS S P  V  L   ++    AG  H 
Sbjct: 353 AGGAHSIALSNTGEVYAWGNGSHGQLGLP--DNKSVSFPMPVLALRGKNIFSIAAGSVHT 410

Query: 62  LVLTSTT 68
           LV    T
Sbjct: 411 LVAGERT 417



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 14/118 (11%)

Query: 137 TCTHKENGCGSDPSQG-VQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
             T + N  G+ P  G V+S  V   H+   +L+  G L+T G+N++GQ+G+ ++  T T
Sbjct: 34  AATVQANASGALPQTGAVKSVAVGGEHSAFVTLD--GTLFTMGSNKHGQLGLGDT-LTRT 90

Query: 196 KPQRVE-------SLVNLPIAL--IACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
           +P  V        +    P+ +  +ACG +H+  LS S  R+YA+G     QL  P +
Sbjct: 91  EPTLVRFDDEQDAAAAGAPVVIVAVACGRDHTVALSSS-GRVYAWGDAQDGQLGLPAA 147


>gi|449680906|ref|XP_002165118.2| PREDICTED: probable E3 ubiquitin-protein ligase HECTD2-like [Hydra
            magnipapillata]
          Length = 1011

 Score = 86.7 bits (213), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 119/258 (46%), Gaps = 39/258 (15%)

Query: 858  KLSFCLQVLQKLNSLNNETLTS-----SISAGGRTVSNIRTPAPHGG---RKVAYTAFYM 909
            K  F +Q  + +  L NE L S     S+SA  +T+  +       G    ++  ++FY 
Sbjct: 510  KFDFIIQGFKSV--LVNEILVSNVSKESLSALCQTLQLLYKANIFKGDHYSRIPKSSFYC 567

Query: 910  PDLATVCDIRIDYFRWISGRPNGSTRDF-LCNYPFIFDAKAKTTLLEMDQRIQME----- 963
            P+L +  D + +Y  WI+      +  F + ++PF+ +   K  ++ +D   QM      
Sbjct: 568  PELTSKLDFKYEYTSWIARHNCKESNLFSILDFPFLLEPIVKVQVIHIDAITQMREEYQD 627

Query: 964  ---HAMNQTNFYLFLQTFNPHT---------LNQYLEVEVSRDNIVEDTIRELAQYTTND 1011
               H             FN  +         +  YL +E+ R NIV+DT+++L     +D
Sbjct: 628  AIVHQARIQQVQKSWADFNDASALSRVVQSAMCPYLLLEIRRQNIVDDTLKQLRN-KFSD 686

Query: 1012 FKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRS 1071
            FKKPLK+  T            GE+  D GG+++EF  ++++ + DP YG+F   E++  
Sbjct: 687  FKKPLKIKYTEG----------GEQGLDMGGLQKEFFQVIIETMFDPNYGLFTISEDSNL 736

Query: 1072 IWFSEDTFEDQNMYFLIG 1089
            +WF+    E   M+ L+G
Sbjct: 737  MWFNALCLESVVMFNLVG 754



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 67/102 (65%), Gaps = 2/102 (1%)

Query: 719 HYGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP 777
           +YG+ T  E++  +WF+    E   M  L+G L GLAIYN  I+++ FPL +YKK+L   
Sbjct: 724 NYGLFTISEDSNLMWFNALCLESVVMFNLVGILLGLAIYNGIILDVHFPLLVYKKLLGYE 783

Query: 778 ILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLL 819
           + L+DL+++ PTL KSL ++L Y E D+E  FG+TF  ++ L
Sbjct: 784 VGLEDLREIQPTLCKSLDELLSY-EGDVEIDFGLTFEVFHNL 824


>gi|432108022|gb|ELK33009.1| Putative E3 ubiquitin-protein ligase HERC6 [Myotis davidii]
          Length = 1098

 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 53/132 (40%), Positives = 70/132 (53%), Gaps = 14/132 (10%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL++ G+ F+WG ++HGQLGL   D  SQ+ P+RV+ L  + + Q  AG +   
Sbjct: 73  GDHHSLALSEDGKAFSWGKNSHGQLGL-GKDFPSQASPQRVRSLEGIPLAQVAAGGA--- 128

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLASVSVVQAC 121
                    HS AL+  G  F WG ++ GQL L   D   QS  P  V  L S+ V+   
Sbjct: 129 ---------HSFALSLSGTSFGWGSNSAGQLALSGKDIPVQSYKPLSVGRLKSLDVIYIS 179

Query: 122 AGYSHCLVLTSS 133
            GY H  VLT S
Sbjct: 180 CGYEHTAVLTQS 191



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 102/436 (23%), Positives = 162/436 (37%), Gaps = 77/436 (17%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLASVSVVQACAGYSH 60
            G  HS AL+  G  F WG ++ GQL L   D   QS  P  V  L S+ V+    GY H
Sbjct: 125 AGGAHSFALSLSGTSFGWGSNSAGQLALSGKDIPVQSYKPLSVGRLKSLDVIYISCGYEH 184

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGG-----------------------------DTHG 91
             VLT +  L  +  +N C +     G                                G
Sbjct: 185 TAVLTQS--LLEAQCMNSCTDEVPRDGLRGLGPSLCPQPRNPAVAWCHPLTCSTILPVRG 242

Query: 92  QLGLESADKKSQSI-----PKRVKGLASVSVVQACAG-YSH--------CLVLTSSGVVT 137
            +G     + SQ +     P  +    SV      +G YSH          +L    +V 
Sbjct: 243 SIGARPPTQLSQHLGAGGGPAPLHWSPSVGQSAGESGPYSHPPWGLAPPTHLLHHPAMVP 302

Query: 138 CTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKP 197
            +    G  S  +     + + D+   +      G+++T+G+N +GQ+G ++     + P
Sbjct: 303 LSSGPIGASSTSTAARCQHHIADACHVLHHALVNGKVFTFGDNCFGQLG-HSPTAKKSGP 361

Query: 198 QRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWI 257
           Q VE +  L ++ I CG+ H+     +  R+ +FG GS+    SP    +T         
Sbjct: 362 QEVERIDGL-VSQIDCGSFHTLAYVYTARRVVSFGHGSSCTSSSPHPEAQTEN------- 413

Query: 258 ASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTK--SSDGVLSDDFRVLNPATQIL 315
            S ++     D LV    G+ VK I++G   + VT  +   S  V       ++   Q  
Sbjct: 414 -SDISCLISADDLV----GVQVKHIFAGTYANFVTTYQDTGSTNVSKKTLPEISRMNQSR 468

Query: 316 DVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCMNGSFLQVE-----NDEHFS 370
              +  +     E E  KS+          +  +F SP C+  SFL+       N     
Sbjct: 469 AEQWMAMTSGSNEREATKSE----------IRMIFSSPACLTASFLKKRESGKMNSIDVD 518

Query: 371 CNSKKFSFIKLSLINW 386
               K +F KL+   W
Sbjct: 519 LQMAKDTFEKLTQKQW 534



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 41/165 (24%)

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            L  + G  HSLAL++ G+ F+WG ++HGQLGL   D  SQ+ P+RV+ L  + + Q  A
Sbjct: 67  TLQVSCGDHHSLALSEDGKAFSWGKNSHGQLGL-GKDFPSQASPQRVRSLEGIPLAQVAA 125

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H   L+ SG                                        + WG+N  
Sbjct: 126 GGAHSFALSLSGTS--------------------------------------FGWGSNSA 147

Query: 183 GQMGINNSNTTVT--KPQRVESLVNLPIALIACGANHSFVLSKSV 225
           GQ+ ++  +  V   KP  V  L +L +  I+CG  H+ VL++S+
Sbjct: 148 GQLALSGKDIPVQSYKPLSVGRLKSLDVIYISCGYEHTAVLTQSL 192



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 49/73 (67%), Gaps = 4/73 (5%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y EE   +WF +    ++   FL G LCGL++Y+  + ++PFPLAL+KK+L++  
Sbjct: 800 YGMFMYPEEGSYMWFPKI---EKKRYFLFGRLCGLSLYHLNVADIPFPLALFKKLLEQKP 856

Query: 779 LLQDLKDLSPTLA 791
            L+DLK+LSP L 
Sbjct: 857 SLEDLKELSPLLG 869



 Score = 60.1 bits (144), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L+  G+ ++WG N +GQ+G+     +   PQRV SL  +P+A +A G  HSF LS S +
Sbjct: 79  ALSEDGKAFSWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGT 138

Query: 227 RLYAFGIGSAVQL 239
             + +G  SA QL
Sbjct: 139 S-FGWGSNSAGQL 150



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 27/150 (18%)

Query: 941  YPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDT 1000
            +PFIF+  +K  L + D   ++            L++   H  +    + V R ++V+D 
Sbjct: 705  FPFIFNLLSKIKLWQADSVKKI------------LESRITHMFSPGFLLRVRRSHLVDDA 752

Query: 1001 IRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKY 1060
            + +L Q    D +K L +   + IY             +  GV+ EF  ++ +E+   +Y
Sbjct: 753  LHQLNQAAVTDLRKELVIEFINEIY------------SEGYGVKSEFFYIIFEEMTKKEY 800

Query: 1061 GMFKEYEETRSIWFSEDTFEDQNMYFLIGK 1090
            GMF   EE   +WF +    ++  YFL G+
Sbjct: 801  GMFMYPEEGSYMWFPKI---EKKRYFLFGR 827



 Score = 48.9 bits (115), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 10/112 (8%)

Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
           +  +F SP C+  SFL+    E    NS +  VD+Q+ +D ++ + +      +  +S +
Sbjct: 489 IRMIFSSPACLTASFLK--KRESGKMNSID--VDLQMAKDTFEKLTQ------KQWISFM 538

Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
                  HL+ +L    P  EAL +FL LP      +PR  E L +PFA A+
Sbjct: 539 ITTCLRDHLLGALPCRSPHQEALSVFLLLPQCPVMHDPRNSESLVVPFAQAV 590


>gi|432856086|ref|XP_004068347.1| PREDICTED: ubiquitin-protein ligase E3A-like [Oryzias latipes]
          Length = 939

 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 97/209 (46%), Gaps = 28/209 (13%)

Query: 884  GGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPF 943
            G RTV +IR   P       +  F    L  V ++  D+  +   + +  T+    + PF
Sbjct: 497  GVRTVDSIRPLIP-------FEDFINESLNDVIEMDKDFTFF---KVDAETKFSFQSCPF 546

Query: 944  IFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRE 1003
            I  A  K   L  D RI M      T  Y  +Q   P   N YL+++V RD+I++D +  
Sbjct: 547  ILSAITKNQGLYYDNRISMYSERRLTALYSMVQGQQP---NPYLKLKVRRDHIIDDALVR 603

Query: 1004 LAQYTT---NDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKY 1060
            L   +    +D KK L V            +F GE+  D GGV +EF  L+L+EI +P  
Sbjct: 604  LEMISMENPSDLKKQLFV------------EFEGEQGVDEGGVSKEFFQLVLEEIFNPDI 651

Query: 1061 GMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            GMF   + T+  WF+  + E++  Y LIG
Sbjct: 652  GMFTYDDNTKLFWFNSSSLENEAQYTLIG 680



 Score = 61.6 bits (148), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 60/101 (59%), Gaps = 4/101 (3%)

Query: 721 GITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPIL 779
           G+  Y++ T+  WF+  + E++    LIG + GLAIYN  I+++ FP+ +Y+K++ +   
Sbjct: 652 GMFTYDDNTKLFWFNSSSLENEAQYTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGT 711

Query: 780 LQDLKDLSPTLAKSLQDILDYR---EPDLEDVFGITFRNWY 817
             DL D  P L +SL+++L+Y    E D+   F I+  + +
Sbjct: 712 FLDLSDSHPVLYQSLKELLEYTGNVEEDMMLTFQISHTDLF 752


>gi|348677972|gb|EGZ17789.1| hypothetical protein PHYSODRAFT_499543 [Phytophthora sojae]
          Length = 1008

 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 127/283 (44%), Gaps = 69/283 (24%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGL--ESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 63
           H++AL   GE+F+WG + HG LG   ESA + +++    V  LA+   V A  G  H + 
Sbjct: 209 HAMALAKAGELFSWGDNAHGALGFAAESAAQVARNRATVVGALANYQAVAAAVGGHHSIA 268

Query: 64  LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLE-------------SADKKSQSIPK--- 107
           +         +A +D G VF WG ++HGQLG+              SA ++  + P+   
Sbjct: 269 VCD------QVAGHD-GVVFCWGSNSHGQLGISPSSSSTIDKLTDGSAKREPTTFPRAAV 321

Query: 108 --RVKGLASVSVVQACAGYSHCLVLTSSGVV---TCTH----------KENGCGSDPS-- 150
             +V  L SVSV     G  H L LTS G V    C+           K +    +P+  
Sbjct: 322 IHQVATLRSVSVRLVACGVLHSLALTSDGKVYSWGCSDGGRLGHVKPLKRSSDVGEPALV 381

Query: 151 QGVQSNLV------QDSHTTITSLNS------PGELYTWGNNEYGQMGINNSNTTVTKPQ 198
            GV +NLV         H+   +  +       G ++TWG   YGQ+G+  +  T  +PQ
Sbjct: 382 SGVLTNLVVLRIACGAWHSACIAAEASQADSGAGRVFTWGTGVYGQLGVGKAQVTY-EPQ 440

Query: 199 RVESLVNLP---------IALIACGANHSFVLSKSVSRLYAFG 232
               +V LP            +ACG +H+  L+ + +R++ +G
Sbjct: 441 ----VVRLPPRELDDEVLATRLACGTHHTAALTVA-NRIFTWG 478



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 70/250 (28%)

Query: 72  HSLALNDCGEVFTWGGDTHGQLGL--ESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 129
           H++AL   GE+F+WG + HG LG   ESA + +++    V  LA+   V A  G  H + 
Sbjct: 209 HAMALAKAGELFSWGDNAHGALGFAAESAAQVARNRATVVGALANYQAVAAAVGGHHSIA 268

Query: 130 LTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGIN- 188
           +           +   G D                       G ++ WG+N +GQ+GI+ 
Sbjct: 269 VC----------DQVAGHD-----------------------GVVFCWGSNSHGQLGISP 295

Query: 189 NSNTTVTK-------------PQ-----RVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
           +S++T+ K             P+     +V +L ++ + L+ACG  HS  L+ S  ++Y+
Sbjct: 296 SSSSTIDKLTDGSAKREPTTFPRAAVIHQVATLRSVSVRLVACGVLHSLALT-SDGKVYS 354

Query: 231 FGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHS-GGLVVKKIYSGGDHS 289
           +G     +L   K + ++  +              GE +LVS     LVV +I  G  HS
Sbjct: 355 WGCSDGGRLGHVKPLKRSSDV--------------GEPALVSGVLTNLVVLRIACGAWHS 400

Query: 290 IVTVTKSSDG 299
                ++S  
Sbjct: 401 ACIAAEASQA 410



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 7/99 (7%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKG-LASVSVVQACAGYS 59
           G+ HSLAL   G+V++WG    G+LG     K+S  +  P  V G L ++ V++   G  
Sbjct: 339 GVLHSLALTSDGKVYSWGCSDGGRLGHVKPLKRSSDVGEPALVSGVLTNLVVLRIACGAW 398

Query: 60  HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESA 98
           H   + +      S A +  G VFTWG   +GQLG+  A
Sbjct: 399 HSACIAAEA----SQADSGAGRVFTWGTGVYGQLGVGKA 433


>gi|335296869|ref|XP_003357882.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sus scrofa]
          Length = 531

 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 97/244 (39%), Gaps = 54/244 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V + A      
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVSIA------ 187

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V Q   
Sbjct: 188 -----CGQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVNQIVC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 241 GYAHTLALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G  N N  ++ P  +       + + AC + H+         +Y +G      +  P
Sbjct: 263 GQLGTGNKNNLLS-PAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLP 321

Query: 243 KSVH 246
              H
Sbjct: 322 HLTH 325



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 96/236 (40%), Gaps = 54/236 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L   + G V+ WG + + QLG  + ++              ++ +Q C       V+ 
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-------------GIAPIQVCTNLLIKQVVE 132

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V + A   
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVSIA--- 187

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CG   S  V  N               GE+Y WG N  GQ+
Sbjct: 188 -------------------CGQTSSMAVLDN---------------GEVYGWGYNGNGQL 213

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           G+ N+   +T P RV +L ++ +  I CG  H+  L+     LYA+G  +  QL +
Sbjct: 214 GLGNNGNQLT-PVRVAALHSVCVNQIVCGYAHTLALTDE-GLLYAWGANTYGQLGT 267



 Score = 46.6 bits (109), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 43/182 (23%)

Query: 73  SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLT 131
           +L + D  EVF +G +    LG  + D +S  +PK+++ L    +     G   H L+ T
Sbjct: 34  ALYVTDNDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91

Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
             GVV                                      Y WG+N Y Q+G   +N
Sbjct: 92  EDGVV--------------------------------------YAWGHNGYSQLGNGTTN 113

Query: 192 TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQ 250
             +   Q   +L+   +  +ACG++HS  L+     ++A+G  +  Q+ S  + ++ TP+
Sbjct: 114 QGIAPIQVCTNLLIKQVVEVACGSHHSMALAAD-GEVFAWGYNNCGQVGSGSTANQPTPR 172

Query: 251 LI 252
            +
Sbjct: 173 KV 174


>gi|171689390|ref|XP_001909635.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944657|emb|CAP70768.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1226

 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 23/194 (11%)

Query: 899  GRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQ 958
            G+ V  + FY   L    D+  D+  W   +     R   C YPF+    AK  +LE D 
Sbjct: 770  GQIVPTSDFYT-TLLDDSDLVGDFEAWEKKQ----ARFAFCQYPFLLSIGAKIQILEHDA 824

Query: 959  RIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTT---NDFKKP 1015
            R QME   ++     F    +   + Q+L + + RD +VED+++ +++       D KK 
Sbjct: 825  RRQME---SRARDAFFDSILSHRVVRQFLTLNIRRDCLVEDSLKAVSEVIGGGGEDIKKG 881

Query: 1016 LKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFS 1075
            LK+             F+GEE  DAGG+R+E+ +LL++E+    +GMF   E++   +F+
Sbjct: 882  LKI------------VFKGEEGVDAGGLRKEWFLLLVREVFGRDHGMFLYDEDSGYCYFN 929

Query: 1076 EDTFEDQNMYFLIG 1089
             ++ E    +FL+G
Sbjct: 930  PNSLEPSEQFFLVG 943



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 18/116 (15%)

Query: 716  GINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL- 774
            G +H      E++   +F+ ++ E     FL+G + GLAIYN TI+++  P   ++K+L 
Sbjct: 911  GRDHGMFLYDEDSGYCYFNPNSLEPSEQFFLVGVVLGLAIYNSTILDVALPPFAFRKLLM 970

Query: 775  --DEPIL---------------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                P L               L+DL +  P LA+ L+ +L+Y + DLE+VF + F
Sbjct: 971  AAPPPPLAGQVAHQQRQTMNYTLEDLAEFRPRLARGLRQLLEYSDDDLEEVFCLDF 1026


>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
          Length = 2335

 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 109/243 (44%), Gaps = 29/243 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS A+   G ++TWG   +G+LG    +  +   PK V+ L+   VVQ   G     
Sbjct: 576 GSSHSAAIGSSGTLYTWGHGMYGRLG--HGNNHTLLKPKPVQALSGQQVVQVACGSRDA- 632

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +L L   G V++WG    G+LG   +D     +PK V+ L+   VV+   
Sbjct: 633 ---------QTLCLTQDGLVYSWGDGDFGKLGRGGSD--GCCVPKPVERLSGQDVVKIEC 681

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTTIT---SL 168
           G    L L+  G+V    K +    G GSD         +G++ + V D         ++
Sbjct: 682 GAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAV 741

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
              G+++ WG+N++GQ G N   T   KP +V+ L  + I  +ACG++HS   + +    
Sbjct: 742 TEGGQVFAWGDNDHGQQG-NGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAFADTSHEA 800

Query: 229 YAF 231
             F
Sbjct: 801 QTF 803



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 110/254 (43%), Gaps = 55/254 (21%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  H LAL++ GEV++WG    G+LG    ++ S   P+ ++ L    +V+   G SH 
Sbjct: 1501 AGGKHILALSNEGEVYSWGEGVDGKLG--HGNRSSLDHPRIIESLRGDLIVKVATGGSH- 1557

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                       S A+N  G ++TWG   +G+LG E  D + Q  PK V  L    VV   
Sbjct: 1558 -----------SAAINATGGLYTWGKGRYGRLGHE--DSEDQLKPKLVNALKDNLVVDVA 1604

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGE--LYTWGN 179
             G                   NG               D+ T   +  + G   +++WG+
Sbjct: 1605 CG-------------------NG---------------DAQTLCITEGTGGSSVVWSWGD 1630

Query: 180  NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
             +YG++G   S+     P  +++L+   I  +ACG+  S  LSK+   +Y +G G   +L
Sbjct: 1631 GDYGKLGRGGSDGCKV-PAIIDTLMGKHITHVACGSQFSLALSKA-GGVYTWGKGDYYRL 1688

Query: 240  DSPKSVH-KTPQLI 252
                  H + P+LI
Sbjct: 1689 GHGSDEHVRRPKLI 1702



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 100/235 (42%), Gaps = 25/235 (10%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            TG  HS A+N  G ++TWG   +G+LG E  D + Q  PK V  L    VV    G    
Sbjct: 1553 TGGSHSAAINATGGLYTWGKGRYGRLGHE--DSEDQLKPKLVNALKDNLVVDVACGNGDA 1610

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              L  T G   S        V++WG   +G+LG   +D     +P  +  L    +    
Sbjct: 1611 QTLCITEGTGGSSV------VWSWGDGDYGKLGRGGSD--GCKVPAIIDTLMGKHITHVA 1662

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITS 167
             G    L L+ +G V    K +    G GSD            +G++   V        +
Sbjct: 1663 CGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIA 1722

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
                G++YTWG+N+ GQ+G   +  T   P+ V +L    I+ ++CG+ H+   S
Sbjct: 1723 AVDNGDVYTWGDNDEGQIGDGTTQATQI-PRLVAALQGHHISHVSCGSAHTVAWS 1776



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 114/280 (40%), Gaps = 54/280 (19%)

Query: 12  DCG-EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGL 70
           DC  +VF WG +   QLG     K     P   K L  + V Q   G      +T     
Sbjct: 427 DCAAKVFVWGLNDKDQLGGLKGSK--HKTPVASKDLQRLKVTQVIGGSKSLFAVTMG--- 481

Query: 71  WHSLALNDCGEVFTWGGDTHGQLGLE----SADKKSQSI-PKRVKGLASVSVVQACAGYS 125
                    G+V+  G  T G+LGL     S  + +Q + P+ +K LA  S      G  
Sbjct: 482 ---------GKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHS------GGR 526

Query: 126 HCLVLTSSGVV----TCTHKENGCGSD------------PSQGVQSNLVQDSHTTITSLN 169
           H + LT  G V         + G GS             P + ++      SH+   ++ 
Sbjct: 527 HAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSA--AIG 584

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL- 228
           S G LYTWG+  YG++G  N N T+ KP+ V++L    +  +ACG+  +  L  +   L 
Sbjct: 585 SSGTLYTWGHGMYGRLGHGN-NHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLV 643

Query: 229 YAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGED 268
           Y++G G   +L    S         G  +  PV   +G+D
Sbjct: 644 YSWGDGDFGKLGRGGS--------DGCCVPKPVERLSGQD 675


>gi|300794911|ref|NP_001178141.1| RCC1 and BTB domain-containing protein 1 [Bos taurus]
 gi|296481892|tpg|DAA24007.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
           domain containing protein 1 [Bos taurus]
          Length = 531

 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 96/244 (39%), Gaps = 54/244 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A      
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA------ 187

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V Q   
Sbjct: 188 -----CGQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVNQIVC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 241 GYAHTLALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G  N N  ++ P  +       I + AC + H+         +Y +G      +  P
Sbjct: 263 GQLGTGNKNNLLS-PAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLP 321

Query: 243 KSVH 246
              H
Sbjct: 322 HLTH 325



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 74/182 (40%), Gaps = 43/182 (23%)

Query: 73  SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLT 131
           +L + D  EVF +G +    LG  + D  S  +PK+++ L    +     G   H L+ T
Sbjct: 34  ALYVTDSDEVFVFGLNYSSCLG--TGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91

Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
             GVV                                      Y WG+N Y Q+G   +N
Sbjct: 92  EDGVV--------------------------------------YAWGHNGYSQLGNGTTN 113

Query: 192 TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQ 250
             +   Q   +L+   +  +ACG++HS  L+     ++A+G  +  Q+ S  + ++ TP+
Sbjct: 114 QGLAPIQVCTNLLIKQVVEVACGSHHSMALAAD-GEVFAWGYNNCGQVGSGSTANQPTPR 172

Query: 251 LI 252
            +
Sbjct: 173 KV 174


>gi|426236339|ref|XP_004012127.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Ovis aries]
          Length = 531

 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 96/244 (39%), Gaps = 54/244 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A      
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA------ 187

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V Q   
Sbjct: 188 -----CGQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVNQIVC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 241 GYAHTLALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G  N N  ++ P  +       I + AC + H+         +Y +G      +  P
Sbjct: 263 GQLGTGNKNNLLS-PAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLP 321

Query: 243 KSVH 246
              H
Sbjct: 322 HLTH 325



 Score = 45.8 bits (107), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 74/182 (40%), Gaps = 43/182 (23%)

Query: 73  SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLT 131
           +L + D  EVF +G +    LG  + D +S  +PK++  L    +     G   H L+ T
Sbjct: 34  ALYVTDSDEVFVFGLNYSNCLG--TGDNQSTLVPKKLDALCGKKIKSLSYGSGPHVLLST 91

Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
             GVV                                      Y WG+N Y Q+G   +N
Sbjct: 92  EDGVV--------------------------------------YAWGHNGYSQLGNGTTN 113

Query: 192 TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQ 250
             +   Q   +L+   +  +ACG++HS  L+     ++A+G  +  Q+ S  + ++ TP+
Sbjct: 114 QGLAPIQVCTNLLIKQVVEVACGSHHSMALAAD-GEVFAWGYNNCGQVGSGSTANQPTPR 172

Query: 251 LI 252
            +
Sbjct: 173 KV 174


>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
          Length = 2334

 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 109/243 (44%), Gaps = 29/243 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS A+   G ++TWG   +G+LG    +  +   PK V+ L+   VVQ   G     
Sbjct: 575 GSSHSAAIGSSGTLYTWGHGMYGRLG--HGNNHTLLKPKPVQALSGQQVVQVACGSRDA- 631

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +L L   G V++WG    G+LG   +D     +PK V+ L+   VV+   
Sbjct: 632 ---------QTLCLTQDGLVYSWGDGDFGKLGRGGSD--GCCVPKPVERLSGQDVVKIEC 680

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTTIT---SL 168
           G    L L+  G+V    K +    G GSD         +G++ + V D         ++
Sbjct: 681 GAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAV 740

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
              G+++ WG+N++GQ G N   T   KP +V+ L  + I  +ACG++HS   + +    
Sbjct: 741 TEGGQVFAWGDNDHGQQG-NGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAFADTSHEA 799

Query: 229 YAF 231
             F
Sbjct: 800 QTF 802



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 110/254 (43%), Gaps = 55/254 (21%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
             G  H LAL++ GEV++WG    G+LG    ++ S   P+ ++ L    +V+   G SH 
Sbjct: 1500 AGGKHILALSNEGEVYSWGEGVDGKLG--HGNRSSLDHPRIIESLRGDLIVKVATGGSH- 1556

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                       S A+N  G ++TWG   +G+LG E  D + Q  PK V  L    VV   
Sbjct: 1557 -----------SAAINATGGLYTWGKGRYGRLGHE--DSEDQLKPKLVNALKDNLVVDVA 1603

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGE--LYTWGN 179
             G                   NG               D+ T   +  + G   +++WG+
Sbjct: 1604 CG-------------------NG---------------DAQTLCITEGTGGSSVVWSWGD 1629

Query: 180  NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
             +YG++G   S+     P  +++L+   I  +ACG+  S  LSK+   +Y +G G   +L
Sbjct: 1630 GDYGKLGRGGSDGCKV-PAIIDTLMGKHITHVACGSQFSLALSKA-GGVYTWGKGDYYRL 1687

Query: 240  DSPKSVH-KTPQLI 252
                  H + P+LI
Sbjct: 1688 GHGSDEHVRRPKLI 1701



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 100/235 (42%), Gaps = 25/235 (10%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            TG  HS A+N  G ++TWG   +G+LG E  D + Q  PK V  L    VV    G    
Sbjct: 1552 TGGSHSAAINATGGLYTWGKGRYGRLGHE--DSEDQLKPKLVNALKDNLVVDVACGNGDA 1609

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              L  T G   S        V++WG   +G+LG   +D     +P  +  L    +    
Sbjct: 1610 QTLCITEGTGGSSV------VWSWGDGDYGKLGRGGSD--GCKVPAIIDTLMGKHITHVA 1661

Query: 122  AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITS 167
             G    L L+ +G V    K +    G GSD            +G++   V        +
Sbjct: 1662 CGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIA 1721

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
                G++YTWG+N+ GQ+G   +  T   P+ V +L    I+ ++CG+ H+   S
Sbjct: 1722 AVDNGDVYTWGDNDEGQIGDGTTQATQI-PRLVAALQGHHISHVSCGSAHTVAWS 1775



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 114/280 (40%), Gaps = 54/280 (19%)

Query: 12  DCG-EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGL 70
           DC  +VF WG +   QLG     K     P   K L  + V Q   G      +T     
Sbjct: 426 DCAAKVFVWGLNDKDQLGGLKGSK--HKTPVASKDLQRLKVTQVIGGSKSLFAVTMG--- 480

Query: 71  WHSLALNDCGEVFTWGGDTHGQLGLE----SADKKSQSI-PKRVKGLASVSVVQACAGYS 125
                    G+V+  G  T G+LGL     S  + +Q + P+ +K LA  S      G  
Sbjct: 481 ---------GKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHS------GGR 525

Query: 126 HCLVLTSSGVV----TCTHKENGCGSD------------PSQGVQSNLVQDSHTTITSLN 169
           H + LT  G V         + G GS             P + ++      SH+   ++ 
Sbjct: 526 HAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSA--AIG 583

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL- 228
           S G LYTWG+  YG++G  N N T+ KP+ V++L    +  +ACG+  +  L  +   L 
Sbjct: 584 SSGTLYTWGHGMYGRLGHGN-NHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLV 642

Query: 229 YAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGED 268
           Y++G G   +L    S         G  +  PV   +G+D
Sbjct: 643 YSWGDGDFGKLGRGGS--------DGCCVPKPVERLSGQD 674


>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 393

 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 115/245 (46%), Gaps = 29/245 (11%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           VFTWG  T GQLG  S +K    I    + L S  +++   G +   +     G  HS A
Sbjct: 7   VFTWGTGTQGQLGHGSFEKTG--IRSSYEEL-SPRILETFEGKN---IAKLDFGATHSAA 60

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           ++  G+++TWG + + QLG  S+++  QSIP+ V  L  + +V    G  H   +   G 
Sbjct: 61  IDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGK 120

Query: 136 V------TCTHKENGC-----GSDPS----------QGVQSNLVQDSHTTITSLNSPGEL 174
           +        T K +G      G D S          QGV    V+       +L   GE+
Sbjct: 121 LFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEI 180

Query: 175 YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
           + WGN EYG++G N ++     P+ VE   +  IA I+ G + +F +++    +Y++GI 
Sbjct: 181 WAWGNGEYGRLG-NGASDNFEVPEPVEYFADENIASISAGRDFTFAITEH-GEVYSWGIN 238

Query: 235 SAVQL 239
           S  QL
Sbjct: 239 SHSQL 243



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 22/225 (9%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H++AL   GE++ WG   +G+LG  ++D  +  +P+ V+  A  ++    AG      +T
Sbjct: 170 HTVALTKDGEIWAWGNGEYGRLGNGASD--NFEVPEPVEYFADENIASISAGRDFTFAIT 227

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADK----KSQSIPKRVKGLASVSVVQAC 121
                       + GEV++WG ++H QLGL           ++IP  V+ L++V+V Q  
Sbjct: 228 ------------EHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVS 275

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNL---VQDSHTTITSLNSPGELYTWG 178
           AGY H   +T+ G +     +          ++      VQ       +L++ G L+T+G
Sbjct: 276 AGYDHAAAVTNDGKMFMWGAKLWLEPHEMTILKDETIISVQCGRYYTAALSASGNLFTFG 335

Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
                 +G     T + +P  VESL    +  + CG +H   L+K
Sbjct: 336 KGHSNCLGHGERKTQL-QPLLVESLNRYNVVSMTCGYSHMGALTK 379


>gi|340721971|ref|XP_003399386.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
           terrestris]
          Length = 539

 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 102/236 (43%), Gaps = 56/236 (23%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADK--KSQSIPKRVKGLASVSVVQACAGYSHCLV 63
           H LAL + G+V++WG + + +LG  S ++      IP  +     V +  AC G+     
Sbjct: 91  HVLALTEEGKVYSWGYNDYCELGNRSTNEGLTPTLIPSALNNEFVVDI--ACGGH----- 143

Query: 64  LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG 123
                   HSLAL + GEV+ WG +  GQ+G  +     Q IPK +              
Sbjct: 144 --------HSLALTNKGEVYAWGHNVSGQVGCGTILSTVQPIPKLLH------------- 182

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
               +VL    VV  +     CG   S  V  N               GE+Y+WG+N  G
Sbjct: 183 ----IVLNGKKVVHIS-----CGDSSSVAVTDN---------------GEVYSWGHNGVG 218

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           Q+GI N  T+  +PQ+V +   + I  + CG  H+  LS     LY +G  S  QL
Sbjct: 219 QLGIGNC-TSQAEPQKVATFAKIVIEKVVCGYMHTLALSDE-GDLYVWGANSYGQL 272



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 14/91 (15%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           S+A+ D GEV++WG +  GQLG+   +  SQ+ P++V   A + + +   GY        
Sbjct: 200 SVAVTDNGEVYSWGHNGVGQLGI--GNCTSQAEPQKVATFAKIVIEKVVCGY-------- 249

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLES 97
                H+LAL+D G+++ WG +++GQLGL +
Sbjct: 250 ----MHTLALSDEGDLYVWGANSYGQLGLNT 276



 Score = 47.0 bits (110), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 43/175 (24%)

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHK 141
           V+  G +T+G LG  + D  S   PK+++ L   SV                       K
Sbjct: 48  VYGIGNNTYGCLG--TGDTHSTIYPKKIEALCGKSV-----------------------K 82

Query: 142 ENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVE 201
               G  P               + +L   G++Y+WG N+Y ++G  ++N  +T      
Sbjct: 83  TFAYGKGPH--------------VLALTEEGKVYSWGYNDYCELGNRSTNEGLTPTLIPS 128

Query: 202 SLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP---KSVHKTPQLIH 253
           +L N  +  IACG +HS  L+     +YA+G   + Q+       +V   P+L+H
Sbjct: 129 ALNNEFVVDIACGGHHSLALTNK-GEVYAWGHNVSGQVGCGTILSTVQPIPKLLH 182



 Score = 42.4 bits (98), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 12/84 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+LAL+D G+++ WG +++GQLGL +    +  IP +++      ++     + H +
Sbjct: 248 GYMHTLALSDEGDLYVWGANSYGQLGLNT--DSNVWIPTKLQVPEMGRILDIATSHYHHI 305

Query: 63  VLTSTTGLWHSLALNDCGEVFTWG 86
                     SLA+++   +F WG
Sbjct: 306 ----------SLAMSEGNRIFMWG 319


>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
          Length = 1047

 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 111/252 (44%), Gaps = 38/252 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HS A+   G+++TWG  TH    L    + S  IPK+V G      V     Y  C 
Sbjct: 352 GEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVS----YVAC- 406

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G WH+  +   G++FT+G  T G LG    D  S SIP+ V+ L     ++   
Sbjct: 407 ------GPWHTAVVTSAGQLFTFGDGTFGALG--HGDHSSMSIPREVEALRGQRTMRVAC 458

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H     ++ VV                    ++  S    +  +S G+L+TWG+ + 
Sbjct: 459 GVWH-----TAAVVEL------------------MIASSSFESSGSSSSGKLFTWGDGDK 495

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           G++G  +    +  PQ V +L+N     +ACG N S  L+ S  R+Y  G     QL SP
Sbjct: 496 GRLGHGDKEPRLV-PQSVTALINESFCQVACGHNLSVALTTS-GRVYTMGSAVYGQLGSP 553

Query: 243 KSVHKTPQLIHG 254
            +  K P L+ G
Sbjct: 554 VADGKIPTLVEG 565



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 105/250 (42%), Gaps = 48/250 (19%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHC 61
           G WH+  +   G++FT+G  T G LG    D  S SIP+ V+ L     ++ AC      
Sbjct: 407 GPWHTAVVTSAGQLFTFGDGTFGALG--HGDHSSMSIPREVEALRGQRTMRVAC------ 458

Query: 62  LVLTSTTGLWHSLALND---------------CGEVFTWGGDTHGQLGLESADKKSQSIP 106
                  G+WH+ A+ +                G++FTWG    G+LG    DK+ + +P
Sbjct: 459 -------GVWHTAAVVELMIASSSFESSGSSSSGKLFTWGDGDKGRLG--HGDKEPRLVP 509

Query: 107 KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKE--NGCGSDPSQGVQSNLVQDSHTT 164
           + V  L + S  Q   G++  + LT+SG V           GS  + G    LV+     
Sbjct: 510 QSVTALINESFCQVACGHNLSVALTTSGRVYTMGSAVYGQLGSPVADGKIPTLVEGKIAN 569

Query: 165 ------------ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIA 212
                       +  L S  E+YTWG    GQ+G +  N     P  V+ L +  +  + 
Sbjct: 570 SFVEEVACGSYHVAVLTSKTEVYTWGKGTNGQLG-HGDNDHRNTPTLVDFLKDKQVKNVV 628

Query: 213 CGANHSFVLS 222
           CG N +  +S
Sbjct: 629 CGLNFTAAIS 638



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 61/135 (45%), Gaps = 20/135 (14%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ--ACAGYSHCLVL 64
           S+AL   G V+T G   +GQLG   AD K   IP  V+G  + S V+  AC  Y H  VL
Sbjct: 530 SVALTTSGRVYTMGSAVYGQLGSPVADGK---IPTLVEGKIANSFVEEVACGSY-HVAVL 585

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
           TS T            EV+TWG  T+GQLG    D   ++ P  V  L    V     G 
Sbjct: 586 TSKT------------EVYTWGKGTNGQLG--HGDNDHRNTPTLVDFLKDKQVKNVVCGL 631

Query: 125 SHCLVLTSSGVVTCT 139
           +    ++    V+C 
Sbjct: 632 NFTAAISLHKWVSCA 646



 Score = 40.8 bits (94), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 11/114 (9%)

Query: 151 QGVQSNLVQDSHTTITS------LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLV 204
           + ++S +V D H+          +   GE+++WG     ++G +     V+ P+ +++L 
Sbjct: 284 KALESTVVLDVHSIACGGKHAVLVTKKGEVFSWGEECGSRLG-HGVEVDVSHPKLIDALC 342

Query: 205 NLPIALIACGANHSFVLSKSVSRLYAFGIG---SAVQLDSPKSVHKTPQLIHGP 255
            + I L+ACG  HS  ++ S   LY +G G   S +     ++ H  P+ + GP
Sbjct: 343 GMNIELVACGEYHSCAVTLS-GDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGP 395


>gi|351542219|ref|NP_001084549.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Xenopus laevis]
          Length = 600

 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 107/246 (43%), Gaps = 59/246 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV-KGLASVSVVQACAGYSHC 61
           G  HS+AL   GEVF+WG +  GQ+G  S    +QS+P++V   L S  VV   AG +  
Sbjct: 206 GSHHSMALTSDGEVFSWGYNNSGQVG--SGTTANQSVPRKVSSSLQSKVVVSIAAGQT-- 261

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      S+A+ D G V+ WG +  GQLGL   +  +Q +P R+     V ++Q  
Sbjct: 262 ----------SSMAITDNGHVYGWGYNGTGQLGL--GNTGNQLMPCRLVFAQPVCIIQVV 309

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            GY+H L L+  GV                                      LY WG N 
Sbjct: 310 LGYAHSLALSDQGV--------------------------------------LYAWGANS 331

Query: 182 YGQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           +GQ+GI N SN TV  P +V +   + + + AC + +         ++Y +G+     L 
Sbjct: 332 HGQLGIGNKSNQTV--PVKVGTNERM-VEVAACHSTNISAAKSQSGQVYMWGLCRGQCLL 388

Query: 241 SPKSVH 246
           SP   H
Sbjct: 389 SPHLTH 394



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 1/80 (1%)

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
           N  GE+Y+WG+N Y Q+G  N+    T  Q    L++  +  +ACG++HS  L+ S   +
Sbjct: 161 NEDGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALT-SDGEV 219

Query: 229 YAFGIGSAVQLDSPKSVHKT 248
           +++G  ++ Q+ S  + +++
Sbjct: 220 FSWGYNNSGQVGSGTTANQS 239


>gi|312372193|gb|EFR20208.1| hypothetical protein AND_20485 [Anopheles darlingi]
          Length = 1097

 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 31/201 (15%)

Query: 902  VAYTAFYMPDLATVCDIRIDYFRWISGRP---NGSTRDFLCNYPFIFDAKAKTTLLEMDQ 958
            V Y+ FY   L    ++  DY  + S      NGS   F+  Y F+     KT  L  D 
Sbjct: 565  VPYSEFYNETLCDQIEMDHDYLVYKSMSSLATNGSGFCFMY-YSFVLTPATKTLALYYDS 623

Query: 959  RIQM--EHAMN-----QTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIREL---AQYT 1008
            RI+M  E  ++      T     +Q  NP     +L + + RD++V+D + EL   A   
Sbjct: 624  RIRMFSERRLSVLYNASTGNRTSMQGLNP-----FLNLRIRRDHVVDDALVELEIIAMSN 678

Query: 1009 TNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEE 1068
              D KK L V            +F GE+  D GGV +EF  L+++EI +P YGMF   E+
Sbjct: 679  PKDLKKQLVV------------EFTGEQGIDEGGVSKEFFQLIVEEIFNPDYGMFVTNED 726

Query: 1069 TRSIWFSEDTFEDQNMYFLIG 1089
            + ++WF+  +FE++  + LIG
Sbjct: 727  SSTVWFNPSSFENEAQFTLIG 747



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 60/92 (65%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKD 785
           E++ ++WF+  +FE++    LIG + GLAIYN  I+ + FP+ +Y+K++       DLKD
Sbjct: 725 EDSSTVWFNPSSFENEAQFTLIGIVLGLAIYNNIILAVEFPMVVYRKLMGMKGSFLDLKD 784

Query: 786 LSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
           L+P L  SL  +L+Y E D+E+VF  TF+  Y
Sbjct: 785 LNPVLFNSLNSLLEYTENDMEEVFMQTFKIGY 816


>gi|384251643|gb|EIE25120.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 567

 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 108/268 (40%), Gaps = 68/268 (25%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           TG WH LAL+  G V+ WGG+ +GQ  +E   +        V GL    V Q  AG  H 
Sbjct: 148 TGGWHCLALDSAGLVYAWGGNEYGQCNVEWNVRDVVQPTPCVPGL---RVKQVAAGGMHS 204

Query: 62  LVLTSTTGLW----------------------------------HSLALNDCGEVFTWGG 87
            VLT T  +W                                  H+LALN  GEV  WG 
Sbjct: 205 CVLTDTGEVWTWGEPWGDFSMKVDRHPKKVEGAIDIVKLACGAFHNLALNAAGEVLAWGI 264

Query: 88  DTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGS 147
           +  GQLG  +     ++ P +V GL  V V    AG  H L LT+ G             
Sbjct: 265 NDFGQLG--NGSTFYETSPTKVLGLEDVRVADIVAGGWHSLALTTEG------------- 309

Query: 148 DPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLP 207
                        +H  I    +   ++ WG  EYG++G+ + + + +K +        P
Sbjct: 310 ------------GAHPQIECAKAGKMVFVWGRGEYGRLGLGDRSGS-SKLRATGVAFKEP 356

Query: 208 IALIACGANHSFVLSKSVSRLYAFGIGS 235
            A  +CG  H+ VL+ S  R+Y +G GS
Sbjct: 357 DA--SCGGTHTMVLT-SEGRIYTWGRGS 381



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 32/227 (14%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           ++A++  G+V +WG +    LG   + ++ +  P+RV  L  + + Q             
Sbjct: 101 TVAIDADGQVLSWGWNDRATLG--HSHREHERKPRRVAALRGMEITQV------------ 146

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
           +TG WH LAL+  G V+ WGG+ +GQ  +E   +        V GL    V Q  AG  H
Sbjct: 147 STGGWHCLALDSAGLVYAWGGNEYGQCNVEWNVRDVVQPTPCVPGL---RVKQVAAGGMH 203

Query: 127 CLVLTSSGVVTCTHKENGCGSDPSQGVQSN--LVQDSHTTIT---------SLNSPGELY 175
             VLT +G V    +  G   D S  V  +   V+ +   +          +LN+ GE+ 
Sbjct: 204 SCVLTDTGEVWTWGEPWG---DFSMKVDRHPKKVEGAIDIVKLACGAFHNLALNAAGEVL 260

Query: 176 TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            WG N++GQ+G N S    T P +V  L ++ +A I  G  HS  L+
Sbjct: 261 AWGINDFGQLG-NGSTFYETSPTKVLGLEDVRVADIVAGGWHSLALT 306



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 125/297 (42%), Gaps = 52/297 (17%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           VF WG +  GQL L+ A+  +   PK ++ L      Q        LV  S      ++A
Sbjct: 51  VFGWGVNEDGQLALDEAE--NVMAPKVLEALLGTR-FQGRDFLKSPLVCGSRC----TVA 103

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           ++  G+V +WG +    LG   + ++ +  P+RV  L  + + Q   G  HCL L S+G+
Sbjct: 104 IDADGQVLSWGWNDRATLG--HSHREHERKPRRVAALRGMEITQVSTGGWHCLALDSAGL 161

Query: 136 V-TCTHKENG-CGSD-------------PSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
           V      E G C  +             P   V+       H+ +  L   GE++TWG  
Sbjct: 162 VYAWGGNEYGQCNVEWNVRDVVQPTPCVPGLRVKQVAAGGMHSCV--LTDTGEVWTWG-E 218

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
            +G      S      P++VE  ++  I  +ACGA H+  L+ +   + A+GI    QL 
Sbjct: 219 PWGDF----SMKVDRHPKKVEGAID--IVKLACGAFHNLALN-AAGEVLAWGINDFGQLG 271

Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSS 297
           +  + ++T          SP  +   ED        + V  I +GG HS+   T+  
Sbjct: 272 NGSTFYET----------SPTKVLGLED--------VRVADIVAGGWHSLALTTEGG 310



 Score = 43.9 bits (102), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 63/147 (42%), Gaps = 34/147 (23%)

Query: 1   MTGLWHSLALN---------DCGE----VFTWGGDTHGQLGLESADKKSQSIPKRVKGLA 47
           + G WHSLAL          +C +    VF WG   +G+LGL     +S S   R  G+A
Sbjct: 296 VAGGWHSLALTTEGGAHPQIECAKAGKMVFVWGRGEYGRLGL---GDRSGSSKLRATGVA 352

Query: 48  SVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPK 107
                 +C G +H +VLTS             G ++TWG  + G+LG  +  +K    P 
Sbjct: 353 FKEPDASCGG-THTMVLTSE------------GRIYTWGRGSFGRLG--TGTEKDYLSPV 397

Query: 108 RV---KGLASVSVVQACAGYSHCLVLT 131
            V    G     V+   +G  H LVL 
Sbjct: 398 EVFLPGGPERWRVICCASGGRHSLVLA 424


>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
          Length = 988

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 111/235 (47%), Gaps = 25/235 (10%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WH+  ++  G++FT+G  T G LG    D  + + PK+V+ L  V       G  H  
Sbjct: 330 GHWHTAIISSAGQIFTYGDGTFGVLG--HGDTLTVARPKQVESLKGVRAKAIACGPWHTA 387

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +    G   S A +  G++FTWG    G+LG   ADKK + +P  V+ L      Q   
Sbjct: 388 AIVERMGTVKSNAPS--GKLFTWGDADRGKLG--HADKKMKLVPTCVEPLNDFDFAQVSC 443

Query: 123 GYSHCLVLTSSGVV-TCTHKENGCGSDP-SQGVQSNLVQ--------------DSHTTIT 166
             +  +VLT +GVV T   KE+G   +P S+     L++               SH  + 
Sbjct: 444 AKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVL 503

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
           ++N  G+++TWG    GQ+G+ +     + P  VE+L +  +  IACG N +  +
Sbjct: 504 TMN--GKVFTWGKGTEGQLGLGDY-VDRSYPTLVEALEDKQVHSIACGFNFTMAI 555



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 43/279 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+  +   GEVF+WG D  G+LG + +   S S PK ++ LAS   V+A A      
Sbjct: 223 GEKHAAIVTKQGEVFSWGVDNGGRLGHKVS--VSVSDPKIIESLASTR-VKAIA------ 273

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD-KKSQSIPKRVKG-LASVSVVQA 120
                 G  H+ A++  GE++ WG  TH  LGL     ++SQ  P ++ G L  +S+++ 
Sbjct: 274 -----FGAKHTCAVSISGELYEWGEGTHC-LGLWGDQYQRSQWFPHKLFGPLDGISILKI 327

Query: 121 CAGYSHCLVLTSSGVV---------TCTHKENGCGSDPSQ-----GVQSNLVQ------- 159
             G+ H  +++S+G +            H +    + P Q     GV++  +        
Sbjct: 328 ACGHWHTAIISSAGQIFTYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTA 387

Query: 160 ---DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN 216
              +   T+ S    G+L+TWG+ + G++G  +    +  P  VE L +   A ++C   
Sbjct: 388 AIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLV-PTCVEPLNDFDFAQVSCAKA 446

Query: 217 HSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGP 255
            + VL+ +   ++  G     +L +P S   +  LI GP
Sbjct: 447 QTIVLTIT-GVVFTIGSKEHGRLGNPLSEDTSICLIEGP 484



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 93/224 (41%), Gaps = 32/224 (14%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
           ++F WG      L      K + S+P+ +     + V     G  H  ++T         
Sbjct: 181 DIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQ------- 233

Query: 75  ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG 134
                GEVF+WG D  G+LG + +   S S PK ++ LAS  V     G  H   ++ SG
Sbjct: 234 -----GEVFSWGVDNGGRLGHKVS--VSVSDPKIIESLASTRVKAIAFGAKHTCAVSISG 286

Query: 135 VV----TCTHKENGCGSD-------------PSQGVQSNLVQDSHTTITSLNSPGELYTW 177
            +      TH     G               P  G+    +   H     ++S G+++T+
Sbjct: 287 ELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQIFTY 346

Query: 178 GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
           G+  +G +G +    TV +P++VESL  +    IACG  H+  +
Sbjct: 347 GDGTFGVLG-HGDTLTVARPKQVESLKGVRAKAIACGPWHTAAI 389



 Score = 41.6 bits (96), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 95/253 (37%), Gaps = 39/253 (15%)

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           S+ GL  +       ++F WG      L      K + S+P+ +     + V     G  
Sbjct: 166 SSEGLHVAYGATSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEK 225

Query: 126 HCLVLTSSGVV---------TCTHKENGCGSDP-------SQGVQSNLVQDSHTTITSLN 169
           H  ++T  G V            HK +   SDP       S  V++      HT   S++
Sbjct: 226 HAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSIS 285

Query: 170 SPGELYTWGNNEY--GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
             GELY WG   +  G  G     +     +    L  + I  IACG  H+ ++S S  +
Sbjct: 286 --GELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIIS-SAGQ 342

Query: 228 LYAFGIGS--------AVQLDSPKSVH-----KTPQLIHGPWIASPVAMTAGEDSLVSHS 274
           ++ +G G+         + +  PK V      +   +  GPW  + +    G     + S
Sbjct: 343 IFTYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPS 402

Query: 275 GGLVVKKIYSGGD 287
           G     K+++ GD
Sbjct: 403 G-----KLFTWGD 410


>gi|322785446|gb|EFZ12117.1| hypothetical protein SINV_05294 [Solenopsis invicta]
          Length = 585

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 116/279 (41%), Gaps = 72/279 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHC 61
           G  HS+ALN+ GE++ WG +  GQ G  S+   +Q +P++V   LA   V Q   G    
Sbjct: 190 GSHHSVALNEDGEIYAWGQNNCGQAG--SSITTNQGVPRQVNSNLAGKKVAQIACGQ--- 244

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              TST      +AL + GEV+ WG +  GQLG+   +  +Q  P R+  L    +V+  
Sbjct: 245 ---TST------VALLENGEVYGWGYNGVGQLGI--GNYVNQMTPCRIGTLLGTVIVKVA 293

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            GY H L LT  G                                      +LY WG N 
Sbjct: 294 CGYVHTLALTDEG--------------------------------------QLYVWGGNS 315

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           YGQ+GI+N  T    P  V+  +     + A   NH+ V      R+Y +G      + +
Sbjct: 316 YGQLGISNK-TNACNPVLVKHEMGRVSDIAALHYNHTSVAVGEGGRVYMWGHCRGQSITT 374

Query: 242 PKS-----VHK------TPQLIHGPWIASPVAMTAGEDS 269
           P +     VH       +P ++H P I     + A EDS
Sbjct: 375 PTATPFSNVHDALACWGSPSVMHKPLI-----LYADEDS 408



 Score = 47.0 bits (110), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 81/193 (41%), Gaps = 30/193 (15%)

Query: 82  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLTSSGVVT--- 137
           V+  G +  G LG  + D  S   PK+V  L    +     G   H L LT  G V    
Sbjct: 91  VYALGSNIAGCLG--TGDAHSTLYPKKVDALCEKDIKMFAYGSGPHVLALTKEGEVRLYL 148

Query: 138 -----------CTHKENGC--GSDPSQ----GVQS--NLVQDSHTTITSLNSPGELYTWG 178
                      C      C  G  P+Q    G++   ++   SH ++ +LN  GE+Y WG
Sbjct: 149 RKVYSWGHNGYCELGNGTCNQGLYPTQVNSLGIKRIVDIACGSHHSV-ALNEDGEIYAWG 207

Query: 179 NNEYGQMGINNSNTTVTKPQRVES-LVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
            N  GQ G ++  T    P++V S L    +A IACG   +  L ++   +Y +G     
Sbjct: 208 QNNCGQAG-SSITTNQGVPRQVNSNLAGKKVAQIACGQTSTVALLEN-GEVYGWGYNGVG 265

Query: 238 QLDSPKSVHK-TP 249
           QL     V++ TP
Sbjct: 266 QLGIGNYVNQMTP 278


>gi|410208768|gb|JAA01603.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
 gi|410264078|gb|JAA20005.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
 gi|410293804|gb|JAA25502.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
 gi|410338541|gb|JAA38217.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
          Length = 527

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 93/230 (40%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A      
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA------ 187

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V Q   
Sbjct: 188 -----CGQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVNQIVC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 241 GYAHTLALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N N  ++ P  +       + + AC + H+         +Y +G
Sbjct: 263 GQLGTGNKNNLLS-PAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 95/236 (40%), Gaps = 54/236 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L   + G V+ WG + + QLG  + ++              ++ VQ C       V+ 
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-------------GIAPVQVCTNLLIKQVVE 132

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A   
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA--- 187

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CG   S  V  N               GE+Y WG N  GQ+
Sbjct: 188 -------------------CGQTSSMAVLDN---------------GEVYGWGYNGNGQL 213

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           G+ N+   +T P RV +L ++ +  I CG  H+  L+     LYA+G  +  QL +
Sbjct: 214 GLGNNGNQLT-PVRVAALHSVCVNQIVCGYAHTLALTDE-GLLYAWGANTYGQLGT 267



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 46/194 (23%)

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
           C+  TS +    +L + D  EVF +G +    LG  + D +S  +PK+++GL    +   
Sbjct: 25  CVFGTSAS---EALYVTDNDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEGLCGKKIKSL 79

Query: 121 CAGYS-HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGN 179
             G   H L+ T  GVV                                      Y WG+
Sbjct: 80  SYGSGPHVLLSTEDGVV--------------------------------------YAWGH 101

Query: 180 NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           N Y Q+G   +N  +   Q   +L+   +  +ACG++HS  L+     ++A+G  +  Q+
Sbjct: 102 NGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAAD-GEVFAWGYNNCGQV 160

Query: 240 DSPKSVHK-TPQLI 252
            S  + ++ TP+ +
Sbjct: 161 GSGSTANQPTPRKV 174


>gi|47221092|emb|CAG12786.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 527

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 100/248 (40%), Gaps = 62/248 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++AL   GEVF WG +  GQ+G  S    +Q  P+RV      S +Q  A      
Sbjct: 136 GSHHTIALTTDGEVFAWGYNNSGQVG--SGSTANQPTPRRVS-----SCLQNKA------ 182

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V+    G   S+A+ D GE++ WG + +GQLGL   +  +Q  P R+  L  VSV+Q   
Sbjct: 183 VVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGL--GNNGNQQTPCRIAALQGVSVIQVAC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G V                                      Y WG N Y
Sbjct: 241 GYAHTLALTDEGFV--------------------------------------YAWGANSY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLP----IALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
           GQ+G  N        Q + +L+N        + AC  +H+        ++  +G      
Sbjct: 263 GQLGTGNKCN-----QALPTLINTDKERMAEVAACHTSHTSAAKTQSGQVLMWGQCRGQA 317

Query: 239 LDSPKSVH 246
           + SP   H
Sbjct: 318 VASPHLTH 325



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 96/233 (41%), Gaps = 57/233 (24%)

Query: 8   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTST 67
           + +ND  EVF  G +  G LGL   D +S   P+R+  L    +V           L+  
Sbjct: 37  VTVND--EVFALGTNCSGCLGL--GDLQSTIEPRRIDALCGKKIVS----------LSYG 82

Query: 68  TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 127
           TG   ++A  D GEVF+WG + + QLG  + +           GL               
Sbjct: 83  TGPHVAIATAD-GEVFSWGHNGYSQLGNGTTNH----------GLTPA------------ 119

Query: 128 LVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGI 187
             L S+ ++     E  CGS              H TI +L + GE++ WG N  GQ+G 
Sbjct: 120 --LVSTNLLGKRVIEVACGS--------------HHTI-ALTTDGEVFAWGYNNSGQVG- 161

Query: 188 NNSNTTVTKPQRVES-LVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           + S      P+RV S L N  +  IACG   S  +  S   +Y +G     QL
Sbjct: 162 SGSTANQPTPRRVSSCLQNKAVVNIACGQLCSMAVLDS-GEIYGWGYNCNGQL 213



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 43/180 (23%)

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
           + +ND  EVF  G +  G LGL   D +S   P+R+  L    +V    G          
Sbjct: 37  VTVND--EVFALGTNCSGCLGL--GDLQSTIEPRRIDALCGKKIVSLSYG---------- 82

Query: 134 GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                        + P            H  I +  + GE+++WG+N Y Q+G   +N  
Sbjct: 83  -------------TGP------------HVAIAT--ADGEVFSWGHNGYSQLGNGTTNHG 115

Query: 194 VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
           +T      +L+   +  +ACG++H+  L+     ++A+G  ++ Q+ S  + ++ TP+ +
Sbjct: 116 LTPALVSTNLLGKRVIEVACGSHHTIALTTD-GEVFAWGYNNSGQVGSGSTANQPTPRRV 174


>gi|402894100|ref|XP_003910210.1| PREDICTED: uncharacterized protein LOC101008912 [Papio anubis]
          Length = 878

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 47/227 (20%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           + G  HS +L D GEV+ WG + HGQL  E+A      +P++++              +H
Sbjct: 645 LAGADHSASLTDAGEVYVWGSNKHGQLATEAA---FLPVPQKIE--------------AH 687

Query: 61  CLVLTSTTGLW----HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
           C      T +W    H +A  + G+VFTWG   +GQLG +    +   + K+   L    
Sbjct: 688 CFQNEKVTAVWSGWTHLVAQTETGKVFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSR 747

Query: 117 VVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYT 176
           ++ +     HCL   +         E  CGS+ +  V                  G  Y+
Sbjct: 748 LLNSMPSSLHCLTGAT---------EVSCGSEHNLAVIG----------------GVCYS 782

Query: 177 WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
           WG NE+G  G + + T +  P+ V++L++    L+ CGA HS  L +
Sbjct: 783 WGWNEHGMCG-DGTETNIWAPKPVQALLSSSGLLVGCGAGHSLALCQ 828



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 112/264 (42%), Gaps = 50/264 (18%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS  + D G++F  G +  GQLGL   +      P   K L    + Q   G+   +
Sbjct: 484 GGGHSAVVTDVGDLFVCGLNKDGQLGLGHTEDIPYFTP--CKSLFGCPIQQVACGWDFTI 541

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           +LT              G+V + G ++ GQLG+    ++   +P+ ++ L    VV   A
Sbjct: 542 ILTEN------------GQVLSCGSNSFGQLGVPHGPRRC-VVPQAIE-LHKEKVVCIAA 587

Query: 123 GYSHCLVLTSSGVV--------TCTHKENGC----------GSDPSQ--GVQSN-----L 157
           G  H L  T+SG+V        +C  +   C            +PS+  G++++     L
Sbjct: 588 GLRHALAATASGIVFQWGTGLASCGRRL--CPGQTLPLFFTAKEPSRVTGLENSKAMCVL 645

Query: 158 VQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVES--LVNLPIALIACGA 215
               H+   SL   GE+Y WG+N++GQ+    +   V  PQ++E+    N  +  +  G 
Sbjct: 646 AGADHS--ASLTDAGEVYVWGSNKHGQLATEAAFLPV--PQKIEAHCFQNEKVTAVWSGW 701

Query: 216 NHSFVLSKSVSRLYAFGIGSAVQL 239
            H  V      +++ +G     QL
Sbjct: 702 TH-LVAQTETGKVFTWGRADYGQL 724



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/287 (21%), Positives = 118/287 (41%), Gaps = 67/287 (23%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           ++ L + G+V + G ++ GQLG+    ++   +P+ ++ L    VV   AG  H L  T+
Sbjct: 540 TIILTENGQVLSCGSNSFGQLGVPHGPRRC-VVPQAIE-LHKEKVVCIAAGLRHALAATA 597

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKK-----------SQSIPKRVKGLASV 115
           +            G VF WG       GL S  ++           +   P RV GL + 
Sbjct: 598 S------------GIVFQWG------TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENS 639

Query: 116 SVVQACAGYSHCLVLTSSGVVTC--THKENGCGSDPS-----QGVQSNLVQDSHTT---- 164
             +   AG  H   LT +G V    ++K     ++ +     Q ++++  Q+   T    
Sbjct: 640 KAMCVLAGADHSASLTDAGEVYVWGSNKHGQLATEAAFLPVPQKIEAHCFQNEKVTAVWS 699

Query: 165 ----ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVES-------LVNLPIAL--- 210
               + +    G+++TWG  +YGQ+G         K ++ +S       L ++P +L   
Sbjct: 700 GWTHLVAQTETGKVFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRLLNSMPSSLHCL 759

Query: 211 -----IACGANHSFVLSKSVSRLYAF------GIGSAVQLDSPKSVH 246
                ++CG+ H+  +   V   + +      G G+   + +PK V 
Sbjct: 760 TGATEVSCGSEHNLAVIGGVCYSWGWNEHGMCGDGTETNIWAPKPVQ 806



 Score = 48.1 bits (113), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 105/272 (38%), Gaps = 38/272 (13%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           M  L H L +    +    G +++GQLGL    K+   +P+++K       V+   G   
Sbjct: 431 MNELQHDLDV--VSDALAKGANSYGQLGL--GHKEDVLLPQQLKDFCKPRSVRRITG--- 483

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                   G  HS  + D G++F  G +  GQLGL   +      P   K L    + Q 
Sbjct: 484 --------GGGHSAVVTDVGDLFVCGLNKDGQLGLGHTEDIPYFTP--CKSLFGCPIQQV 533

Query: 121 CAGYSHCLVLTSSG-VVTC---THKENGCGSDPSQGVQSNLVQDSHTTITSL-------- 168
             G+   ++LT +G V++C   +  + G    P + V    ++     +  +        
Sbjct: 534 ACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAL 593

Query: 169 --NSPGELYTWGNN--EYGQMGINNSNT----TVTKPQRVESLVNLPIALIACGANHSFV 220
              + G ++ WG      G+            T  +P RV  L N     +  GA+HS  
Sbjct: 594 AATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGADHSAS 653

Query: 221 LSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLI 252
           L+ +   +Y +G     QL +  +    PQ I
Sbjct: 654 LTDA-GEVYVWGSNKHGQLATEAAFLPVPQKI 684


>gi|391326234|ref|XP_003737624.1| PREDICTED: ubiquitin-protein ligase E3A [Metaseiulus occidentalis]
          Length = 775

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 94/191 (49%), Gaps = 20/191 (10%)

Query: 902  VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQ 961
            +    FY   L+    I  DY  +  G P+       C  PFI    A+   L +D RI+
Sbjct: 343  IELDEFYNELLSDQLLIEHDYSNYREGNPSEKFSFLFC--PFILTPSARIQALNLDNRIK 400

Query: 962  MEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIREL---AQYTTNDFKKPLKV 1018
            M +  ++T  YL     +   LN  L++ V R++IVED +  L   A     D KK L V
Sbjct: 401  MSN--HRTRSYLS-SLMHGELLNPVLKLRVRREHIVEDALVNLEWVALENPTDLKKQLVV 457

Query: 1019 NDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDT 1078
                        +F GE+  D GGV +EF  L+++++ +  YGMF   EET+S WF++++
Sbjct: 458  ------------EFDGEQGVDEGGVSKEFFQLIVEQLFNIDYGMFTVDEETQSYWFNQNS 505

Query: 1079 FEDQNMYFLIG 1089
            FE+   + LIG
Sbjct: 506  FENDAQFSLIG 516



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/107 (42%), Positives = 68/107 (63%), Gaps = 1/107 (0%)

Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+ T  EET+S WF++++FE+     LIG + GLAIYN  I+++ FP+ +Y+K+     
Sbjct: 487 YGMFTVDEETQSYWFNQNSFENDAQFSLIGIILGLAIYNNVILDIRFPMVVYRKLFGVRG 546

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSDDYF 825
             +DL D  PTLA+ L  +L Y EPD+ DVF  TFR  Y+ +  +Y 
Sbjct: 547 TYRDLLDYRPTLARGLHQLLMYSEPDICDVFDQTFRVNYIDVFGNYL 593


>gi|348534587|ref|XP_003454783.1| PREDICTED: ubiquitin-protein ligase E3A-like [Oreochromis niloticus]
          Length = 885

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 76/151 (50%), Gaps = 18/151 (11%)

Query: 942  PFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTI 1001
            PFI +A  K   L  D RI+M      T  Y  +Q      LN YL ++V RD+I++D +
Sbjct: 491  PFILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQG---QQLNPYLRLKVRRDHIIDDAL 547

Query: 1002 REL---AQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDP 1058
              L   A     D KK L             V+F GE+  D GGV +EF  L+++EI +P
Sbjct: 548  VRLEMIAMENPADLKKQL------------YVEFEGEQGVDEGGVSKEFFQLVVEEIFNP 595

Query: 1059 KYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              GMF   E T+  WF+  +FE++  Y LIG
Sbjct: 596  DIGMFTYDEHTKLFWFNPSSFENEGQYTLIG 626



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 63/95 (66%), Gaps = 2/95 (2%)

Query: 721 GITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPIL 779
           G+  Y+E T+  WF+  +FE++    LIG + GLAIYN  I+++ FP+ +Y+K++ +   
Sbjct: 598 GMFTYDEHTKLFWFNPSSFENEGQYTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGT 657

Query: 780 LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
            +DL D +P L +SL+++L+Y E  +E+   ITF+
Sbjct: 658 FRDLADANPVLYQSLKELLEY-EGSVEEDMMITFQ 691


>gi|326490515|dbj|BAJ84921.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 419

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 117/267 (43%), Gaps = 33/267 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS A+   GE+F WG ++ GQLGL  +  K  S P++V  LA V V     G  H +V+T
Sbjct: 130 HSCAVTADGELFVWGKNSSGQLGLGKSAGKVVSTPRKVDYLADVRVKMTALGSEHSIVVT 189

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLG-------LESADKKSQSIPKRVKGLASVSVV 118
                         GE  +WG    G+LG       L  A   ++  P+ +K L  + + 
Sbjct: 190 ED------------GEALSWGAAGGGRLGHGHKSSFLGFAMTSNEYTPRLIKNLDGIKIK 237

Query: 119 QACAGYSHCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTT------ITSL 168
           +  AG  H   +   G V      T K  G  +D  +      +Q S           ++
Sbjct: 238 RIAAGMLHSACIDEKGTVFIFGQKTEKVLGRSNDAPRPSVVEEIQFSEEVACGGYHTCAV 297

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRV-ESLVNLPIALIACGANHSFVLSKSVSR 227
              G+LY+WG+NE G +G+  +   V  P+ V  SL  LP++ ++CG  H+ V+S     
Sbjct: 298 TDRGDLYSWGSNENGCLGLGGTG-MVRFPEVVSSSLFKLPVSKVSCGWKHTAVISG--ED 354

Query: 228 LYAFGIGSAVQLDSPKSVHKTPQLIHG 254
           +Y +G G A      +      QL HG
Sbjct: 355 IYTWGWGGANGTFFEEGHSSGGQLGHG 381



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 61/129 (47%), Gaps = 14/129 (10%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+L L + G VF  G +  GQLG+ S+   +   P  V G     VVQ  AG  H   +T
Sbjct: 78  HTLFLTEGGRVFATGLNDFGQLGIGSSMPHTLD-PVEVSGFHE-KVVQISAGNHHSCAVT 135

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           +             GE+F WG ++ GQLGL  +  K  S P++V  LA V V     G  
Sbjct: 136 AD------------GELFVWGKNSSGQLGLGKSAGKVVSTPRKVDYLADVRVKMTALGSE 183

Query: 126 HCLVLTSSG 134
           H +V+T  G
Sbjct: 184 HSIVVTEDG 192


>gi|432958634|ref|XP_004086081.1| PREDICTED: ubiquitin-protein ligase E3A-like [Oryzias latipes]
          Length = 1010

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 76/151 (50%), Gaps = 18/151 (11%)

Query: 942  PFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTI 1001
            PFI +A  K   L  D RI+M      T  Y  +Q      LN YL ++V RD+I++D +
Sbjct: 564  PFILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQG---QQLNPYLRLKVRRDHIIDDAL 620

Query: 1002 REL---AQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDP 1058
              L   A     D KK L             V+F GE+  D GGV +EF  L+++EI +P
Sbjct: 621  VRLEMIAMENPADLKKQL------------YVEFEGEQGVDEGGVSKEFFQLVVEEIFNP 668

Query: 1059 KYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              GMF   E T+  WF+  +FE++  Y LIG
Sbjct: 669  DIGMFTYDEYTKLFWFNPSSFENEGQYTLIG 699



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 63/95 (66%), Gaps = 2/95 (2%)

Query: 721 GITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPIL 779
           G+  Y+E T+  WF+  +FE++    LIG + GLAIYN  I+++ FP+ +Y+K++ +   
Sbjct: 671 GMFTYDEYTKLFWFNPSSFENEGQYTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGT 730

Query: 780 LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
            +DL D +P L +SL+++L+Y E  +E+   ITF+
Sbjct: 731 FRDLADANPVLNQSLKELLEY-EGSVEEDMMITFQ 764


>gi|242066354|ref|XP_002454466.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
 gi|241934297|gb|EES07442.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
          Length = 1003

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 112/234 (47%), Gaps = 25/234 (10%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WH+  ++  G+++T+G  T G LG    D  S   PK V+ L          G  H  
Sbjct: 347 GQWHTAIISSLGKLYTYGYGTFGVLG--HGDTHSVVHPKEVESLRGSRAKSVACGPWHTA 404

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +  T+G   S A    G++FTWG    G+LG    +KKS+ +P RV+ L      Q   
Sbjct: 405 AIVETSGTLKSSAPG--GKLFTWGDAGGGKLG--HTNKKSKLVPTRVESLIDCDFTQVSC 460

Query: 123 GYSHCLVLTSSGVV-TCTHKENG-CGSDPSQG---------VQSNLVQD-----SHTTIT 166
           G S   VLT +GVV T   KE+G  G+  S           +++  V+D     SH  + 
Sbjct: 461 GMSLTAVLTITGVVFTIGSKEHGQLGNSRSDNTSICMVEGPLKTEFVKDISCGSSHVAVL 520

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
           ++N  G+++TWG    GQ+G+ +     + P  VE+L +  +  IAC +N + V
Sbjct: 521 TMN--GKVFTWGKGTEGQLGLGDY-VDRSSPTLVEALEDKQVDSIACSSNFTAV 571



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 120/297 (40%), Gaps = 79/297 (26%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV----------- 51
           G  H+  +   G+VF+WG +  G+LG +++D  S S PK +  LAS  V           
Sbjct: 240 GEKHAAIVTKQGQVFSWGEENGGRLGHKTSD--SVSDPKIIDSLASTPVKTIAFGAKYTC 297

Query: 52  ------------------------VQACAGYSHCLVLTS--------TTGLWHSLALNDC 79
                                    Q    + H L+ TS          G WH+  ++  
Sbjct: 298 AVSVSGELYEWGEGIHSLGFGKNQCQRSPWFPHKLISTSDGISVLKIACGQWHTAIISSL 357

Query: 80  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGL-ASVSVVQACAGYSHCLVLTSSGVVTC 138
           G+++T+G  T G LG    D  S   PK V+ L  S +   AC  +    ++ +SG    
Sbjct: 358 GKLYTYGYGTFGVLG--HGDTHSVVHPKEVESLRGSRAKSVACGPWHTAAIVETSG---- 411

Query: 139 THKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQ 198
                                    T+ S    G+L+TWG+   G++G  N  + +  P 
Sbjct: 412 -------------------------TLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLV-PT 445

Query: 199 RVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGP 255
           RVESL++     ++CG + + VL+ +   ++  G     QL + +S + +  ++ GP
Sbjct: 446 RVESLIDCDFTQVSCGMSLTAVLTIT-GVVFTIGSKEHGQLGNSRSDNTSICMVEGP 501



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 71/191 (37%), Gaps = 63/191 (32%)

Query: 3   GLWHSLALNDC----------GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVV 52
           G WH+ A+ +           G++FTWG    G+LG    +KKS+ +P RV+ L      
Sbjct: 399 GPWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLG--HTNKKSKLVPTRVESLIDCDFT 456

Query: 53  QACAGYSHCLVLTST----------------------------------------TGLWH 72
           Q   G S   VLT T                                         G  H
Sbjct: 457 QVSCGMSLTAVLTITGVVFTIGSKEHGQLGNSRSDNTSICMVEGPLKTEFVKDISCGSSH 516

Query: 73  SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHCLVLT 131
              L   G+VFTWG  T GQLGL   D   +S P  V+ L    V   AC+        +
Sbjct: 517 VAVLTMNGKVFTWGKGTEGQLGL--GDYVDRSSPTLVEALEDKQVDSIACS--------S 566

Query: 132 SSGVVTCTHKE 142
           +   VTC H+E
Sbjct: 567 NFTAVTCVHRE 577



 Score = 43.9 bits (102), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 37/243 (15%)

Query: 75  ALNDCGEVFTWGGDTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
           A +   ++F WG D  G++        +  S+P+ +K    ++V     G  H  ++T  
Sbjct: 192 ATDSLKDIFVWG-DVLGRMSDHGHVPATNISLPRLLKSSQILNVQSIACGEKHAAIVTKQ 250

Query: 134 GVVTCTHKENG--CGSDPSQGVQSNLVQDSHTT------------ITSLNSPGELYTWGN 179
           G V    +ENG   G   S  V    + DS  +              +++  GELY WG 
Sbjct: 251 GQVFSWGEENGGRLGHKTSDSVSDPKIIDSLASTPVKTIAFGAKYTCAVSVSGELYEWGE 310

Query: 180 NEYG-QMGINNSNTTVTKPQRVESLVN-LPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
             +    G N    +   P ++ S  + + +  IACG  H+ ++S S+ +LY +G G+  
Sbjct: 311 GIHSLGFGKNQCQRSPWFPHKLISTSDGISVLKIACGQWHTAIIS-SLGKLYTYGYGTFG 369

Query: 238 QL---DSPKSVH----------KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYS 284
            L   D+   VH          +   +  GPW  + +  T+G  +L S + G    K+++
Sbjct: 370 VLGHGDTHSVVHPKEVESLRGSRAKSVACGPWHTAAIVETSG--TLKSSAPG---GKLFT 424

Query: 285 GGD 287
            GD
Sbjct: 425 WGD 427


>gi|386780927|ref|NP_001247543.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
 gi|402902026|ref|XP_003913930.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
           [Papio anubis]
 gi|355754700|gb|EHH58601.1| Regulator of chromosome condensation and BTB domain-containing
           protein 1 [Macaca fascicularis]
 gi|383419643|gb|AFH33035.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
 gi|383419645|gb|AFH33036.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
          Length = 531

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 93/230 (40%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A      
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA------ 187

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V Q   
Sbjct: 188 -----CGQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVNQIVC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 241 GYAHTLALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N N  ++ P  +       + + AC + H+         +Y +G
Sbjct: 263 GQLGTGNKNNLLS-PAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 95/236 (40%), Gaps = 54/236 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L   + G V+ WG + + QLG  + ++              ++ +Q C       V+ 
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-------------GIAPIQVCTNLLIKQVVE 132

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A   
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA--- 187

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CG   S  V  N               GE+Y WG N  GQ+
Sbjct: 188 -------------------CGQTSSMAVLDN---------------GEVYGWGYNGNGQL 213

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           G+ N+   +T P RV +L ++ +  I CG  H+  L+     LYA+G  +  QL +
Sbjct: 214 GLGNNGNQLT-PVRVAALHSVCVNQIVCGYAHTLALTDE-GLLYAWGANTYGQLGT 267



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 46/194 (23%)

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
           C+  TS +    +L + D  EVF +G +    LG  + D +S  +PK+++GL+   +   
Sbjct: 25  CVFGTSAS---EALYVTDDDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEGLSGKKIKSL 79

Query: 121 CAGYS-HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGN 179
             G   H L+ T  GVV                                      Y WG+
Sbjct: 80  SYGSGPHVLLSTEDGVV--------------------------------------YAWGH 101

Query: 180 NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           N Y Q+G   +N  +   Q   +L+   +  +ACG++HS  L+     ++A+G  +  Q+
Sbjct: 102 NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAAD-GEVFAWGYNNCGQV 160

Query: 240 DSPKSVHK-TPQLI 252
            S  + ++ TP+ +
Sbjct: 161 GSGSTANQPTPRKV 174


>gi|47226776|emb|CAG06618.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 865

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 76/151 (50%), Gaps = 18/151 (11%)

Query: 942  PFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTI 1001
            PFI +A  K   L  D RI+M      T  Y  +Q      LN YL ++V RD+I++D +
Sbjct: 471  PFILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQG---QQLNPYLRLKVRRDHIIDDAL 527

Query: 1002 REL---AQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDP 1058
              L   A     D KK L             V+F GE+  D GGV +EF  L+++EI +P
Sbjct: 528  VRLEMTAMENPADLKKQL------------YVEFEGEQGVDEGGVSKEFFQLVVEEIFNP 575

Query: 1059 KYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              GMF   E T+  WF+  +FE++  Y LIG
Sbjct: 576  DIGMFTYDERTKLFWFNPSSFENEGQYTLIG 606



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 59/89 (66%), Gaps = 1/89 (1%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKD 785
           E T+  WF+  +FE++    LIG + GLAIYN  I+++ FP+ +Y+K++ +    +DL D
Sbjct: 584 ERTKLFWFNPSSFENEGQYTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGTFRDLAD 643

Query: 786 LSPTLAKSLQDILDYREPDLEDVFGITFR 814
            +P L +SL+++L+Y E  +E+   ITF+
Sbjct: 644 ANPVLYQSLKELLEY-EGSVEEDMMITFQ 671


>gi|57242759|ref|NP_060661.3| RCC1 and BTB domain-containing protein 1 [Homo sapiens]
 gi|114649667|ref|XP_001155108.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 3 [Pan
           troglodytes]
 gi|397476979|ref|XP_003809865.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pan paniscus]
 gi|74751227|sp|Q8NDN9.1|RCBT1_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
           Full=Chronic lymphocytic leukemia deletion region gene 7
           protein; Short=CLL deletion region gene 7 protein;
           AltName: Full=Regulator of chromosome condensation and
           BTB domain-containing protein 1
 gi|21739270|emb|CAD38683.1| hypothetical protein [Homo sapiens]
 gi|117646918|emb|CAL37574.1| hypothetical protein [synthetic construct]
 gi|208965426|dbj|BAG72727.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [synthetic construct]
 gi|410208766|gb|JAA01602.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410264076|gb|JAA20004.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410293802|gb|JAA25501.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410338539|gb|JAA38216.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
          Length = 531

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 93/230 (40%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A      
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA------ 187

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V Q   
Sbjct: 188 -----CGQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVNQIVC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 241 GYAHTLALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N N  ++ P  +       + + AC + H+         +Y +G
Sbjct: 263 GQLGTGNKNNLLS-PAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 95/236 (40%), Gaps = 54/236 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L   + G V+ WG + + QLG  + ++              ++ VQ C       V+ 
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-------------GIAPVQVCTNLLIKQVVE 132

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A   
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA--- 187

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CG   S  V  N               GE+Y WG N  GQ+
Sbjct: 188 -------------------CGQTSSMAVLDN---------------GEVYGWGYNGNGQL 213

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           G+ N+   +T P RV +L ++ +  I CG  H+  L+     LYA+G  +  QL +
Sbjct: 214 GLGNNGNQLT-PVRVAALHSVCVNQIVCGYAHTLALTDE-GLLYAWGANTYGQLGT 267



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 46/194 (23%)

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
           C+  TS +    +L + D  EVF +G +    LG  + D +S  +PK+++GL    +   
Sbjct: 25  CVFGTSAS---EALYVTDNDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEGLCGKKIKSL 79

Query: 121 CAGYS-HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGN 179
             G   H L+ T  GVV                                      Y WG+
Sbjct: 80  SYGSGPHVLLSTEDGVV--------------------------------------YAWGH 101

Query: 180 NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           N Y Q+G   +N  +   Q   +L+   +  +ACG++HS  L+     ++A+G  +  Q+
Sbjct: 102 NGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAAD-GEVFAWGYNNCGQV 160

Query: 240 DSPKSVHK-TPQLI 252
            S  + ++ TP+ +
Sbjct: 161 GSGSTANQPTPRKV 174


>gi|119629205|gb|EAX08800.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Homo sapiens]
          Length = 310

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 85/200 (42%), Gaps = 54/200 (27%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSL L   GEVF WG +  GQ+G  S    +Q IP+RV G     VV          
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTVNQPIPRRVTGCLQNKVV---------- 207

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T   G    +A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L  + V +   
Sbjct: 208 -VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGL--GNSGNQPTPCRVAALQGIRVQRVAC 264

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H LVLT  G                                      ++Y WG N Y
Sbjct: 265 GYAHTLVLTDEG--------------------------------------QVYAWGANSY 286

Query: 183 GQMGINN-SNTTVTKPQRVE 201
           GQ+G  N SN +   P  VE
Sbjct: 287 GQLGTGNKSNQSYPTPVTVE 306



 Score = 48.1 bits (113), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 2/84 (2%)

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           GE++TWG+N Y Q+G   +N  +       +L N  +  +ACG+ HS VL+ S   ++A+
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAW 176

Query: 232 GIGSAVQLDSPKSVHK-TPQLIHG 254
           G  ++ Q+ S  +V++  P+ + G
Sbjct: 177 GYNNSGQVGSGSTVNQPIPRRVTG 200



 Score = 47.0 bits (110), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 83/209 (39%), Gaps = 62/209 (29%)

Query: 10  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTG 69
           +ND  E+F  G +  G LGL   D +S   P+R+  L    +     G    +VL +T G
Sbjct: 63  VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEG 118

Query: 70  LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHCL 128
                      EVFTWG + + QLG  +       +P  +   L++  V++   G  H L
Sbjct: 119 -----------EVFTWGHNAYSQLG--NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSL 165

Query: 129 VLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGIN 188
           VLTS G                                      E++ WG N  GQ+G  
Sbjct: 166 VLTSDG--------------------------------------EVFAWGYNNSGQVG-- 185

Query: 189 NSNTTVTK--PQRVES-LVNLPIALIACG 214
            S +TV +  P+RV   L N  +  IACG
Sbjct: 186 -SGSTVNQPIPRRVTGCLQNKVVVTIACG 213


>gi|297694075|ref|XP_002824322.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pongo abelii]
 gi|332241941|ref|XP_003270143.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Nomascus
           leucogenys]
          Length = 531

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 93/230 (40%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A      
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA------ 187

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V Q   
Sbjct: 188 -----CGQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVNQIVC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 241 GYAHTLALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N N  ++ P  +       + + AC + H+         +Y +G
Sbjct: 263 GQLGTGNKNNLLS-PAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 95/236 (40%), Gaps = 54/236 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L   + G V+ WG + + QLG  + ++              ++ +Q C       V+ 
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-------------GIAPIQVCTNLLIKQVVE 132

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A   
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA--- 187

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CG   S  V  N               GE+Y WG N  GQ+
Sbjct: 188 -------------------CGQTSSMAVLDN---------------GEVYGWGYNGNGQL 213

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           G+ N+   +T P RV +L ++ +  I CG  H+  L+     LYA+G  +  QL +
Sbjct: 214 GLGNNGNQLT-PVRVAALHSVCVNQIVCGYAHTLALTDE-GLLYAWGANTYGQLGT 267



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 46/194 (23%)

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
           C+  TS +    +L + D  EVF +G +    LG  + D +S  +PK+++GL    +   
Sbjct: 25  CVFGTSAS---EALYVTDNDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEGLCGKKIKSL 79

Query: 121 CAGYS-HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGN 179
             G   H L+ T  GVV                                      Y WG+
Sbjct: 80  SYGSGPHVLLSTEDGVV--------------------------------------YAWGH 101

Query: 180 NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           N Y Q+G   +N  +   Q   +L+   +  +ACG++HS  L+     ++A+G  +  Q+
Sbjct: 102 NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAAD-GEVFAWGYNNCGQV 160

Query: 240 DSPKSVHK-TPQLI 252
            S  + ++ TP+ +
Sbjct: 161 GSGSTANQPTPRKV 174


>gi|13699242|gb|AAK38372.1|AF334406_1 CLLL7 protein [Homo sapiens]
 gi|14275565|emb|CAC40027.1| guanine nucleotide exchange factor [Homo sapiens]
 gi|21756194|dbj|BAC04833.1| unnamed protein product [Homo sapiens]
 gi|119629234|gb|EAX08829.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Homo sapiens]
          Length = 531

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 93/230 (40%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A      
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA------ 187

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V Q   
Sbjct: 188 -----CGQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVNQIVC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 241 GYAHTLALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N N  ++ P  +       + + AC + H+         +Y +G
Sbjct: 263 GQLGTGNKNNLLS-PAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 95/236 (40%), Gaps = 54/236 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L   + G V+ WG + + QLG  + ++              ++ VQ C       V+ 
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-------------GIAPVQVCTNLLIKQVVE 132

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A   
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA--- 187

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CG   S  V  N               GE+Y WG N  GQ+
Sbjct: 188 -------------------CGQTSSMAVLDN---------------GEVYGWGYNGNGQL 213

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           G+ N+   +T P RV +L ++ +  I CG  H+  L+     LYA+G  +  QL +
Sbjct: 214 GLGNNGNQLT-PVRVAALHSVCVNQIVCGYAHTLALTDE-GLLYAWGANTYGQLGT 267



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 46/194 (23%)

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
           C+  TS +    +L + D  EVF +G +    LG  + D +S  +PK+++GL    +   
Sbjct: 25  CVFGTSAS---EALYVTDNDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEGLCGKKIKSL 79

Query: 121 CAGYS-HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGN 179
             G   H L+ T  GVV                                      Y WG+
Sbjct: 80  SYGSGPHVLLSTEDGVV--------------------------------------YAWGH 101

Query: 180 NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           N Y Q+G   +N  +   Q   +L+   +  +ACG++HS  L+     ++A+G  +  Q+
Sbjct: 102 NGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAAD-GEVFAWGYNNCGQV 160

Query: 240 DSPKSVHK-TPQLI 252
            S  + ++ TP+ +
Sbjct: 161 GSGSTANQPTPRKV 174


>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
 gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 107/228 (46%), Gaps = 19/228 (8%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WH+  ++  G++FT+G  T G LG    D+KS S+P+ V+ L  +  VQA  G  H  
Sbjct: 430 GPWHTAVVSSAGQLFTFGDGTFGVLG--HGDRKSISLPREVESLKGLRTVQAACGVWHTA 487

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +        S +    G++FTWG    G+LG    DK+++ +P  V  L   +  Q   
Sbjct: 488 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG--HGDKEAKLVPTCVSALVEPNFCQVAC 545

Query: 123 GYSHCLVLTSSG-VVTCTHKENG-CGSDPSQG-----VQSNLVQDSHTTITS-------L 168
           G+S  +  T+SG V T      G  G+  S G     V+  L + S   I         L
Sbjct: 546 GHSLTIARTTSGHVYTMGSPVYGQLGNPQSDGKLPARVEGKLSRSSVEEIACGAYHVAVL 605

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN 216
            S  E+YTWG    G++G  +++     P  VE+L +  +  IACG N
Sbjct: 606 TSKTEVYTWGKGANGRLGHGDTDDK-NLPSLVEALKDKQVKSIACGTN 652



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 120/266 (45%), Gaps = 47/266 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYSHC 61
           G +H+ A+   G+++TWG  T+    L   ++ S  +PKRV G L  + V          
Sbjct: 375 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS--------- 425

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              + + G WH+  ++  G++FT+G  T G LG    D+KS S+P+ V+ L  +  VQA 
Sbjct: 426 ---SISCGPWHTAVVSSAGQLFTFGDGTFGVLG--HGDRKSISLPREVESLKGLRTVQAA 480

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G  H   +    V                            + +S  S G+L+TWG+ +
Sbjct: 481 CGVWHTAAVVEVMV--------------------------GNSSSSNCSSGKLFTWGDGD 514

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV--QL 239
            G++G  +    +  P  V +LV      +ACG  HS  ++++ S  + + +GS V  QL
Sbjct: 515 KGRLGHGDKEAKLV-PTCVSALVEPNFCQVACG--HSLTIARTTSG-HVYTMGSPVYGQL 570

Query: 240 DSPKSVHKTPQLIHGPWIASPVAMTA 265
            +P+S  K P  + G    S V   A
Sbjct: 571 GNPQSDGKLPARVEGKLSRSSVEEIA 596



 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 61/137 (44%), Gaps = 27/137 (19%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ--ACAGYSHCLVL 64
           ++A    G V+T G   +GQLG   +D K   +P RV+G  S S V+  AC  Y H  VL
Sbjct: 550 TIARTTSGHVYTMGSPVYGQLGNPQSDGK---LPARVEGKLSRSSVEEIACGAY-HVAVL 605

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
           TS T            EV+TWG   +G+LG    D K  ++P  V+ L    V     G 
Sbjct: 606 TSKT------------EVYTWGKGANGRLGHGDTDDK--NLPSLVEALKDKQVKSIACG- 650

Query: 125 SHCLVLTSSGVVTCTHK 141
                 T+     C HK
Sbjct: 651 ------TNFTAAICLHK 661



 Score = 44.7 bits (104), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 17/111 (15%)

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS------V 225
           GE+++WG    G++G +  ++ V  PQ +E+L N  I  +ACG  H+  ++ S       
Sbjct: 334 GEIFSWGEESGGRLG-HGVDSDVLHPQLIEALSNTNIEFVACGEYHTCAVTLSGDLYTWG 392

Query: 226 SRLYAFGI---GSAVQLDSPKSVHKTPQLIH------GPWIASPVAMTAGE 267
              Y FG+   G+ V    PK V+   + IH      GPW  + V  +AG+
Sbjct: 393 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVSSAGQ 442



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 37/186 (19%)

Query: 80  GEVFTWG---------GDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 130
           G+VF WG         G TH ++G     K    +PK ++    + V     G  H  ++
Sbjct: 272 GDVFIWGEGTGDGVLGGGTH-RVGSFFGVKMDSLLPKALESAVVLDVQNIACGGQHAALV 330

Query: 131 TSSGVVTCTHKENGCGSDPSQGVQSNLVQ------------------DSHTTITSLNSPG 172
           T  G +    +E+  G     GV S+++                   + HT   +L+  G
Sbjct: 331 TKQGEIFSWGEES--GGRLGHGVDSDVLHPQLIEALSNTNIEFVACGEYHTCAVTLS--G 386

Query: 173 ELYTWGNNEY--GQMGINNSNTTVTKPQRVES-LVNLPIALIACGANHSFVLSKSVSRLY 229
           +LYTWG+  Y  G +G  N  +    P+RV   L  + ++ I+CG  H+ V+S S  +L+
Sbjct: 387 DLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVS-SAGQLF 444

Query: 230 AFGIGS 235
            FG G+
Sbjct: 445 TFGDGT 450


>gi|46250190|gb|AAH68656.1| MGC81035 protein [Xenopus laevis]
          Length = 530

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 107/246 (43%), Gaps = 59/246 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV-KGLASVSVVQACAGYSHC 61
           G  HS+AL   GEVF+WG +  GQ+G  S    +QS+P++V   L S  VV   AG +  
Sbjct: 136 GSHHSMALTSDGEVFSWGYNNSGQVG--SGTTANQSVPRKVSSSLQSKVVVSIAAGQT-- 191

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      S+A+ D G V+ WG +  GQLGL   +  +Q +P R+     V ++Q  
Sbjct: 192 ----------SSMAITDNGHVYGWGYNGTGQLGL--GNTGNQLMPCRLVFAQPVCIIQVV 239

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            GY+H L L+  GV                                      LY WG N 
Sbjct: 240 LGYAHSLALSDQGV--------------------------------------LYAWGANS 261

Query: 182 YGQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           +GQ+GI N SN TV  P +V +   + + + AC + +         ++Y +G+     L 
Sbjct: 262 HGQLGIGNKSNQTV--PVKVGTNERM-VEVAACHSTNISAAKSQSGQVYMWGLCRGQCLL 318

Query: 241 SPKSVH 246
           SP   H
Sbjct: 319 SPHLTH 324



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 1/80 (1%)

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
           N  GE+Y+WG+N Y Q+G  N+    T  Q    L++  +  +ACG++HS  L+ S   +
Sbjct: 91  NEDGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALT-SDGEV 149

Query: 229 YAFGIGSAVQLDSPKSVHKT 248
           +++G  ++ Q+ S  + +++
Sbjct: 150 FSWGYNNSGQVGSGTTANQS 169


>gi|351542221|ref|NP_001082438.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Xenopus laevis]
          Length = 600

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 108/248 (43%), Gaps = 59/248 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV-KGLASVSVVQACAGYSHC 61
           G  HS+AL   GEVF+WG +  GQ+G  S    +QS+P++V   L S  VV   AG +  
Sbjct: 206 GSHHSMALTSDGEVFSWGYNNCGQVG--SGTTANQSVPRKVASSLQSKVVVSISAGQT-- 261

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      S+AL D G V+ WG +  GQLGL   +  +Q +P R+     + ++Q  
Sbjct: 262 ----------SSMALTDNGHVYGWGYNGTGQLGL--GNTGNQLMPCRLVFAQPICIIQVV 309

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            GY+H L L+  GV                                      LY WG N 
Sbjct: 310 LGYAHTLALSDQGV--------------------------------------LYAWGANS 331

Query: 182 YGQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           +GQ+GI N SN TV  P +V +   + + + AC + +         ++Y +G+     L 
Sbjct: 332 HGQLGIGNKSNQTV--PVKVGTNERM-VEVTACHSTNISAAKSQSGQVYMWGLCRGQCLL 388

Query: 241 SPKSVHKT 248
           SP   H T
Sbjct: 389 SPHLTHFT 396



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 58/103 (56%), Gaps = 3/103 (2%)

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
           N  GE+Y+WG+N Y Q+G  N+    T  Q    L++  +  +ACG++HS  L+ S   +
Sbjct: 161 NEDGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALT-SDGEV 219

Query: 229 YAFGIGSAVQLDSPKSVHKT-PQLIHGPWIAS-PVAMTAGEDS 269
           +++G  +  Q+ S  + +++ P+ +     +   V+++AG+ S
Sbjct: 220 FSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVSISAGQTS 262


>gi|27923092|gb|AAO27483.1| HERC2 [Homo sapiens]
          Length = 409

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS  +   G+++TWG   +G+LG   +D + Q  PK V+ L    VV    G    
Sbjct: 2   AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 55

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                 +G   +L L D   V++WG   +G+LG   +D     +P ++  L  + VV+  
Sbjct: 56  ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 107

Query: 122 AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
            G    + LT SG V    K +    G GSD         QG+Q   V    T       
Sbjct: 108 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 167

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
               GE+YTWG+N+ GQ+G   +N  + +P+ V +L    +  +ACG+ H+   S S
Sbjct: 168 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 223


>gi|41053397|ref|NP_956285.1| RCC1 and BTB domain-containing protein 1 [Danio rerio]
 gi|28278439|gb|AAH45877.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Danio rerio]
 gi|182890896|gb|AAI65711.1| Rcbtb1 protein [Danio rerio]
          Length = 531

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 99/234 (42%), Gaps = 62/234 (26%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL   GEVF WG +  GQ+G  S    +Q  P++V               S+CL
Sbjct: 136 GSHHSLALTHEGEVFAWGYNNCGQVG--SGSTANQPTPRKV---------------SNCL 178

Query: 63  ----VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVV 118
               ++    G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P R+  L    V+
Sbjct: 179 QNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGL--GNNGNQLTPCRLIALQGFCVL 236

Query: 119 QACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWG 178
           Q  +GY+H L LT  G+                                      LY WG
Sbjct: 237 QIASGYAHSLALTDEGL--------------------------------------LYAWG 258

Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
            N YGQ+G  N +  ++ P +V +     + + AC + H+        ++Y +G
Sbjct: 259 ANTYGQLGTGNKSNQLS-PVQVMTEKERIVEIAACHSTHTSAAKTQSGQVYMWG 311



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 2/82 (2%)

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           GELY WG+N Y Q+G   +N  V+      +L    +  ++CG++HS  L+     ++A+
Sbjct: 94  GELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHE-GEVFAW 152

Query: 232 GIGSAVQLDSPKSVHK-TPQLI 252
           G  +  Q+ S  + ++ TP+ +
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKV 174



 Score = 40.4 bits (93), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 49/225 (21%), Positives = 79/225 (35%), Gaps = 53/225 (23%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
           EV+  G +    LG  + D +S   PK++  L+   ++    G              H L
Sbjct: 42  EVYVLGLNCSNCLG--TGDSQSTIAPKKLDCLSGKKLISLSYGSGP-----------HVL 88

Query: 75  ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG 134
            + + GE++ WG + + QLG  + ++    I      L    V +   G  H L LT  G
Sbjct: 89  LVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVSTN-LQGKRVTEVSCGSHHSLALTHEG 147

Query: 135 VVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTV 194
                                                 E++ WG N  GQ+G  ++    
Sbjct: 148 --------------------------------------EVFAWGYNNCGQVGSGSTANQP 169

Query: 195 TKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           T  +    L N  I  IACG   S  ++ +   +Y +G     QL
Sbjct: 170 TPRKVSNCLQNKVIVNIACGQTSSMAVTDN-GEVYGWGYNGNGQL 213



 Score = 40.0 bits (92), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 13/85 (15%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  HSLAL D G ++ WG +T+GQLG  + +K +Q  P +V       +V+  A +S  
Sbjct: 240 SGYAHSLALTDEGLLYAWGANTYGQLG--TGNKSNQLSPVQVM-TEKERIVEIAACHS-- 294

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWG 86
              T T     S A    G+V+ WG
Sbjct: 295 ---THT-----SAAKTQSGQVYMWG 311


>gi|444731984|gb|ELW72311.1| RCC1 and BTB domain-containing protein 1 [Tupaia chinensis]
          Length = 531

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 93/230 (40%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A      
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA------ 187

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V Q   
Sbjct: 188 -----CGQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVNQIVC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 241 GYAHTLALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N N  ++ P  +       + + AC + H+         +Y +G
Sbjct: 263 GQLGTGNKNNLLS-PAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 95/236 (40%), Gaps = 54/236 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L   + G V+ WG + + QLG  + ++              ++ +Q C       V+ 
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-------------GIAPIQVCTNLLIKQVVE 132

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A   
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA--- 187

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CG   S  V  N               GE+Y WG N  GQ+
Sbjct: 188 -------------------CGQTSSMAVLDN---------------GEVYGWGYNGNGQL 213

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           G+ N+   +T P RV +L ++ +  I CG  H+  L+     LYA+G  +  QL +
Sbjct: 214 GLGNNGNQLT-PVRVAALHSVCVNQIVCGYAHTLALTDE-GLLYAWGANTYGQLGT 267



 Score = 47.4 bits (111), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 43/182 (23%)

Query: 73  SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLT 131
           +L + D  EVF +G +    LG  + D +S  +PK+++ L    +     G   H L+ T
Sbjct: 34  ALYVTDSDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91

Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
             GVV                                      Y WG+N Y Q+G   +N
Sbjct: 92  EDGVV--------------------------------------YAWGHNGYSQLGNGTTN 113

Query: 192 TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQ 250
             +   Q   +L+   +  +ACG++HS  L+     ++A+G  +  Q+ S  + ++ TP+
Sbjct: 114 QGIAPIQVCTNLLIKQVVEVACGSHHSMALAAD-GEVFAWGYNNCGQVGSGSTANQPTPR 172

Query: 251 LI 252
            +
Sbjct: 173 KV 174


>gi|194221881|ref|XP_001489975.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Equus
           caballus]
          Length = 531

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 93/230 (40%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A      
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA------ 187

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V Q   
Sbjct: 188 -----CGQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVNQIVC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 241 GYAHTLALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N N  ++ P  +       + + AC + H+         +Y +G
Sbjct: 263 GQLGTGNKNNLLS-PAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 95/236 (40%), Gaps = 54/236 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L   + G V+ WG + + QLG  + ++              ++ +Q C       V+ 
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-------------GIAPIQVCTNLLIKQVVE 132

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A   
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA--- 187

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CG   S  V  N               GE+Y WG N  GQ+
Sbjct: 188 -------------------CGQTSSMAVLDN---------------GEVYGWGYNGNGQL 213

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           G+ N+   +T P RV +L ++ +  I CG  H+  L+     LYA+G  +  QL +
Sbjct: 214 GLGNNGNQLT-PVRVAALHSVCVNQIVCGYAHTLALTDE-GLLYAWGANTYGQLGT 267



 Score = 47.0 bits (110), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 43/182 (23%)

Query: 73  SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLT 131
           +L + D  EVF +G +    LG  + D +S  IPK+++ L    +     G   H L+ T
Sbjct: 34  ALYVTDNDEVFVFGLNYSNCLG--TGDNQSTLIPKKLEALCGKKIKSLSYGSGPHVLLST 91

Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
             GVV                                      Y WG+N Y Q+G   +N
Sbjct: 92  EDGVV--------------------------------------YAWGHNGYSQLGNGTTN 113

Query: 192 TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQ 250
             +   Q   +L+   +  +ACG++HS  L+     ++A+G  +  Q+ S  + ++ TP+
Sbjct: 114 QGIAPIQVCTNLLIKQVVEVACGSHHSMALAAD-GEVFAWGYNNCGQVGSGSTANQPTPR 172

Query: 251 LI 252
            +
Sbjct: 173 KV 174


>gi|410928508|ref|XP_003977642.1| PREDICTED: ubiquitin-protein ligase E3A-like [Takifugu rubripes]
          Length = 893

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 76/151 (50%), Gaps = 18/151 (11%)

Query: 942  PFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTI 1001
            PFI +A  K   L  D RI+M      T  Y  +Q      LN YL ++V RD+I++D +
Sbjct: 499  PFILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQG---QQLNPYLRLKVRRDHIIDDAL 555

Query: 1002 REL---AQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDP 1058
              L   A     D KK L             V+F GE+  D GGV +EF  L+++EI +P
Sbjct: 556  VRLEMIAMENPADLKKQL------------YVEFEGEQGVDEGGVSKEFFQLVVEEIFNP 603

Query: 1059 KYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              GMF   E T+  WF+  +FE++  Y LIG
Sbjct: 604  DIGMFTYDERTKLFWFNPSSFENEGQYTLIG 634



 Score = 70.5 bits (171), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 59/89 (66%), Gaps = 1/89 (1%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKD 785
           E T+  WF+  +FE++    LIG + GLAIYN  I+++ FP+ +Y+K++ +    +DL D
Sbjct: 612 ERTKLFWFNPSSFENEGQYTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGTFRDLAD 671

Query: 786 LSPTLAKSLQDILDYREPDLEDVFGITFR 814
            +P L +SL+++L+Y E  +E+   ITF+
Sbjct: 672 ANPVLYQSLKELLEY-EGSVEEDMMITFQ 699


>gi|410947356|ref|XP_003980415.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Felis catus]
          Length = 531

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 93/230 (40%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A      
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTTNQPTPRKVTNCLHIKRVVGIA------ 187

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V Q   
Sbjct: 188 -----CGQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVNQIVC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 241 GYAHTLALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N N  ++ P  +       + + AC + H+         +Y +G
Sbjct: 263 GQLGTGNKNNLLS-PAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 95/236 (40%), Gaps = 54/236 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L   + G V+ WG + + QLG  + ++              ++ +Q C       V+ 
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-------------GIAPIQVCTNLLIKQVVE 132

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A   
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVG--SGSTTNQPTPRKVTNCLHIKRVVGIA--- 187

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CG   S  V  N               GE+Y WG N  GQ+
Sbjct: 188 -------------------CGQTSSMAVLDN---------------GEVYGWGYNGNGQL 213

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           G+ N+   +T P RV +L ++ +  I CG  H+  L+     LYA+G  +  QL +
Sbjct: 214 GLGNNGNQLT-PVRVAALHSVCVNQIVCGYAHTLALTDE-GLLYAWGANTYGQLGT 267



 Score = 46.6 bits (109), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 43/182 (23%)

Query: 73  SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLT 131
           +L + D  EVF +G +    LG  + D +S  +PK+++ L    +     G   H L+ T
Sbjct: 34  ALYVTDNDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91

Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
             GVV                                      Y WG+N Y Q+G   +N
Sbjct: 92  EDGVV--------------------------------------YAWGHNGYSQLGNGTTN 113

Query: 192 TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQ 250
             +   Q   +L+   +  +ACG++HS  L+     ++A+G  +  Q+ S  + ++ TP+
Sbjct: 114 QGIAPIQVCTNLLIKQVVEVACGSHHSMALAAD-GEVFAWGYNNCGQVGSGSTTNQPTPR 172

Query: 251 LI 252
            +
Sbjct: 173 KV 174


>gi|28416625|gb|AAO42843.1| At3g02510 [Arabidopsis thaliana]
          Length = 182

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 22/143 (15%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           ++G  +SLA+ D G +FTWG +  G LG    + K+++IP RVK LA+V + QA      
Sbjct: 44  VSGSRNSLAICDDGTMFTWGWNQRGTLG-HQPETKTENIPSRVKALANVKITQA------ 96

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD-------KKSQSIPKRVKGLA 113
                   G WH LA++D G  + WGG+ +GQ G E          ++   IPKR     
Sbjct: 97  ------AIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCA--P 148

Query: 114 SVSVVQACAGYSHCLVLTSSGVV 136
            ++V Q  AG +H +VLT  G V
Sbjct: 149 KLTVRQVAAGGTHSVVLTREGHV 171



 Score = 83.2 bits (204), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 60/214 (28%), Positives = 91/214 (42%), Gaps = 59/214 (27%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           +  WG    GQLG+ + ++K  +            VV+A   YS   V +  +G  +SLA
Sbjct: 7   IIAWGSGEDGQLGIGTNEEKEWA-----------CVVEALEPYS---VRSVVSGSRNSLA 52

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
           + D G +FTWG +  G LG    + K+++IP RVK LA+V + QA  G  HCL       
Sbjct: 53  ICDDGTMFTWGWNQRGTLG-HQPETKTENIPSRVKALANVKITQAAIGGWHCL------- 104

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
                                          +++  G  Y WG NEYGQ G       + 
Sbjct: 105 -------------------------------AVDDQGRAYAWGGNEYGQCGEEPLKDEMG 133

Query: 196 KPQRVESLV------NLPIALIACGANHSFVLSK 223
           +P R + ++       L +  +A G  HS VL++
Sbjct: 134 RPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTR 167



 Score = 51.6 bits (122), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 21/91 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESAD-------KKSQSIPKRVKGLASVSVVQAC 55
           G WH LA++D G  + WGG+ +GQ G E          ++   IPKR      ++V Q  
Sbjct: 99  GGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCA--PKLTVRQVA 156

Query: 56  AGYSHCLVLTSTTGLWHSLALNDCGEVFTWG 86
           AG +H +VLT              G V+TWG
Sbjct: 157 AGGTHSVVLTRE------------GHVWTWG 175



 Score = 41.6 bits (96), Expect = 2.3,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 1/99 (1%)

Query: 134 GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
           G+ T   KE  C  +  +      V        ++   G ++TWG N+ G +G      T
Sbjct: 19  GIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKT 78

Query: 194 VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
              P RV++L N+ I   A G  H   +     R YA+G
Sbjct: 79  ENIPSRVKALANVKITQAAIGGWHCLAVDDQ-GRAYAWG 116


>gi|433547476|ref|ZP_20503684.1| hypothetical protein D478_27117 [Brevibacillus agri BAB-2500]
 gi|432181233|gb|ELK38926.1| hypothetical protein D478_27117 [Brevibacillus agri BAB-2500]
          Length = 286

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 70/235 (29%), Positives = 113/235 (48%), Gaps = 30/235 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSL L   G V++WG +  GQLG        Q++P +VKGL +V+ + A + +S   
Sbjct: 41  GSRHSLVLKGDGTVWSWGDNAAGQLG--DGTTIQQNVPVQVKGLTNVTRIAAGSSFS--- 95

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      +AL   G V++WG +  GQLG    + K+ +    V+ +    V++  A
Sbjct: 96  -----------VALKADGTVWSWGDNGFGQLG----NGKTSTSNTPVQAVGLTDVIEIAA 140

Query: 123 GYSHCLVLTSSGVVTCTHKE-NGCGSDPSQ--GVQ--SNLVQDSHTTITSLNSPGELYTW 177
           G +H L L   G V    K  N   + P Q  G+     +   S+  + ++   G ++ W
Sbjct: 141 GTNHGLALKKDGTVWLWGKLLNSSYNTPFQVGGIADVKEIAAGSNFNL-AVKKDGTVWAW 199

Query: 178 GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GNN +GQ+GINN   T + P ++ +L N  I  +A G    + L     ++YA+G
Sbjct: 200 GNNGFGQLGINNIYDTPS-PTKIGTLAN--IVSVAAGEFSGYALDVD-GKVYAWG 250


>gi|407002778|gb|EKE19448.1| hypothetical protein ACD_9C00014G0001, partial [uncultured
           bacterium]
          Length = 691

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 126/253 (49%), Gaps = 35/253 (13%)

Query: 2   TGLWHSLAL-NDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           TG +HSLA+  D G+V+ WG + + QLG  S+   + S+P RV G+    +  A A    
Sbjct: 336 TGQYHSLAVVGDNGDVYAWGYNINNQLGNNSS--TNSSVPVRV-GVEGAWLSGAAA---- 388

Query: 61  CLVLTSTTGL-WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ 119
                  TG+ + SLAL + G V++WG +  GQLGL S    +Q +P ++    +V  ++
Sbjct: 389 ------VTGMNYSSLALMNNGTVWSWGSNNVGQLGLGSVG--TQVVPAQISNFTNVKAIR 440

Query: 120 ACAGYSHCLVLTSSG-VVTCTHKENGCGSDPSQGVQSNLVQD-----------SHTTITS 167
           +  G SH + LT+ G V T  +   G   D +  V  N  QD            ++++ +
Sbjct: 441 S--GTSHVIALTNDGDVYTWGYNNVGQLGDNTT-VNKNTPQDINLGGIIGIAAGNSSLYA 497

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIAC---GANHSFVLSKS 224
           + + G+ + WG N YG++GI    T   K    ES +   I  +AC   G+  + V  KS
Sbjct: 498 MGADGKFWVWGYNYYGELGIGTQGTGTNKIVPFESNLMDRIIDVACNTSGSGGAAVALKS 557

Query: 225 VSRLYAFGIGSAV 237
              ++ +G GS++
Sbjct: 558 DGSVWTWGYGSSI 570



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 114/235 (48%), Gaps = 41/235 (17%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL   G+V+ WG + +GQLG+   D  ++ IP ++  L++V  +             
Sbjct: 290 HVLALKSNGDVYAWGLNGYGQLGV--GDTVTKEIPTKISTLSNVKAIG------------ 335

Query: 66  STTGLWHSLA-LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
             TG +HSLA + D G+V+ WG + + QLG  S+   S  +   V+G A +S   A  G 
Sbjct: 336 --TGQYHSLAVVGDNGDVYAWGYNINNQLGNNSSTNSSVPVRVGVEG-AWLSGAAAVTGM 392

Query: 125 SH-CLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNL--------VQDSHTTITSLNSP 171
           ++  L L ++G V      N    G GS  +Q V + +        ++   + + +L + 
Sbjct: 393 NYSSLALMNNGTVWSWGSNNVGQLGLGSVGTQVVPAQISNFTNVKAIRSGTSHVIALTND 452

Query: 172 GELYTWGNNEYGQMGINNSNTTVTK--PQRVESLVNLPIA-----LIACGANHSF 219
           G++YTWG N  GQ+G    NTTV K  PQ +     + IA     L A GA+  F
Sbjct: 453 GDVYTWGYNNVGQLG---DNTTVNKNTPQDINLGGIIGIAAGNSSLYAMGADGKF 504



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 52/205 (25%)

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           +T+G+  + AL   G+V+ WG  + G+LGL   +   + +P  +  L  V  + A +G  
Sbjct: 234 TTSGI-SAFALTKDGKVYAWG--SGGRLGLGVGEIAEKYVPVEIPNLTDVVSIAAGSG-G 289

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           H L L S+G                                      ++Y WG N YGQ+
Sbjct: 290 HVLALKSNG--------------------------------------DVYAWGLNGYGQL 311

Query: 186 GINNSNTTVTK--PQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPK 243
           G+ +   TVTK  P ++ +L N  +  I  G  HS  +      +YA+G     QL +  
Sbjct: 312 GVGD---TVTKEIPTKISTLSN--VKAIGTGQYHSLAVVGDNGDVYAWGYNINNQLGNNS 366

Query: 244 SVHKTPQL---IHGPWIASPVAMTA 265
           S + +  +   + G W++   A+T 
Sbjct: 367 STNSSVPVRVGVEGAWLSGAAAVTG 391



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 125/308 (40%), Gaps = 81/308 (26%)

Query: 1   MTGL-WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 59
           +TG+ + SLAL + G V++WG +  GQLGL S    +Q +P ++    +V  +++  G S
Sbjct: 389 VTGMNYSSLALMNNGTVWSWGSNNVGQLGLGSVG--TQVVPAQISNFTNVKAIRS--GTS 444

Query: 60  HCLVLTSTTGLWHSLALNDCGEV------------------------------------- 82
           H + LT+  G  ++   N+ G++                                     
Sbjct: 445 HVIALTND-GDVYTWGYNNVGQLGDNTTVNKNTPQDINLGGIIGIAAGNSSLYAMGADGK 503

Query: 83  -FTWGGDTHGQLGLESADKKSQSIP-------KRV---------KGLASVSVVQACA--- 122
            + WG + +G+LG+ +    +  I         R+          G A+V++    +   
Sbjct: 504 FWVWGYNYYGELGIGTQGTGTNKIVPFESNLMDRIIDVACNTSGSGGAAVALKSDGSVWT 563

Query: 123 -GYSHCLVLT---SSGVVTC-------THKENGCGSDPSQGVQSNLV-QDSHTTITSLNS 170
            GY   ++ T   SS VVT        +H  +  GS   Q   + L   DSH        
Sbjct: 564 WGYGSSIMGTNSYSSAVVTSPVQVKLWSHPADYFGSTEPQKTITKLAPSDSHMLAVR--- 620

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
            GELY+WG+N  GQ+G  + N     P     L N+     +  A HS VLS     +Y 
Sbjct: 621 NGELYSWGSNAQGQLGTGD-NIGRFTPMVANGLNNITDISSSPRAFHSLVLSG--GNVYT 677

Query: 231 FGIGSAVQ 238
           FG  ++ Q
Sbjct: 678 FGSNASRQ 685


>gi|73988984|ref|XP_542558.2| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
           [Canis lupus familiaris]
          Length = 531

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 93/230 (40%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A      
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTTNQPTPRKVTNCLHIKRVVGIA------ 187

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V Q   
Sbjct: 188 -----CGQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVNQIVC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 241 GYAHTLALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N N  ++ P  +       + + AC + H+         +Y +G
Sbjct: 263 GQLGTGNKNNLLS-PAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 95/236 (40%), Gaps = 54/236 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L   + G V+ WG + + QLG  + ++              ++ +Q C       V+ 
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-------------GIAPIQVCTNLLIKQVVE 132

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A   
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVG--SGSTTNQPTPRKVTNCLHIKRVVGIA--- 187

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CG   S  V  N               GE+Y WG N  GQ+
Sbjct: 188 -------------------CGQTSSMAVLDN---------------GEVYGWGYNGNGQL 213

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           G+ N+   +T P RV +L ++ +  I CG  H+  L+     LYA+G  +  QL +
Sbjct: 214 GLGNNGNQLT-PVRVAALHSVCVNQIVCGYAHTLALTDE-GLLYAWGANTYGQLGT 267



 Score = 46.6 bits (109), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 43/182 (23%)

Query: 73  SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLT 131
           +L + D  EVF +G +    LG  + D +S  +PK+++ L    +     G   H L+ T
Sbjct: 34  ALYVTDNDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91

Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
             GVV                                      Y WG+N Y Q+G   +N
Sbjct: 92  EDGVV--------------------------------------YAWGHNGYSQLGNGTTN 113

Query: 192 TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQ 250
             +   Q   +L+   +  +ACG++HS  L+     ++A+G  +  Q+ S  + ++ TP+
Sbjct: 114 QGIAPIQVCTNLLIKQVVEVACGSHHSMALAAD-GEVFAWGYNNCGQVGSGSTTNQPTPR 172

Query: 251 LI 252
            +
Sbjct: 173 KV 174


>gi|241121413|ref|XP_002403206.1| regulator of chromosome condensation, putative [Ixodes scapularis]
 gi|215493385|gb|EEC03026.1| regulator of chromosome condensation, putative [Ixodes scapularis]
          Length = 309

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 105/223 (47%), Gaps = 31/223 (13%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
           G  F++G + +GQLGL    K   + PK +KGL    VV    G +H LV T        
Sbjct: 25  GRAFSFGSNGYGQLGL--GHKNPVTRPKCIKGLKDHRVVLVACGRAHTLVAT-------- 74

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
               D  +V+ +G +T  QLGL+S + +  + P  ++ L  + + Q  AG  H + LT  
Sbjct: 75  ----DDLKVYGFGMNTEHQLGLDSQEFQ-HTEPALIRSLTGLQIKQLAAGAEHSIALTDK 129

Query: 134 GV--VTCTHKEN--GCGSDPSQGVQSNLVQD----------SHTTITSLNSPGELYTWGN 179
           GV  V    KE   G G+ PS      L  D           HT I S  + G++Y +G+
Sbjct: 130 GVAFVWGCGKEGQLGLGTRPSVPEPLELKVDIRIMSVSAGYYHTAIVS--AEGKVYAFGD 187

Query: 180 NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
              GQ+G+ N  T  +KPQ +     + IA + CG +H+  LS
Sbjct: 188 GRNGQLGLGNKTTQSSKPQPIPFPEGIKIARVVCGESHTAFLS 230



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 23/149 (15%)

Query: 150 SQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIA 209
           S GVQ   +       T   + G  +++G+N YGQ+G+ + N  VT+P+ ++ L +  + 
Sbjct: 3   SDGVQMASISGKVQQKTRQITEGRAFSFGSNGYGQLGLGHKN-PVTRPKCIKGLKDHRVV 61

Query: 210 LIACGANHSFVLSKSVSRLYAFGIGSAVQ--LDSPKSVHKTPQLIHGPWIASPVAMTAGE 267
           L+ACG  H+ V +  + ++Y FG+ +  Q  LDS +  H  P LI               
Sbjct: 62  LVACGRAHTLVATDDL-KVYGFGMNTEHQLGLDSQEFQHTEPALIR-------------- 106

Query: 268 DSLVSHSGGLVVKKIYSGGDHSIVTVTKS 296
            SL     GL +K++ +G +HSI    K 
Sbjct: 107 -SLT----GLQIKQLAAGAEHSIALTDKG 130


>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus laevis]
 gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
          Length = 526

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 102/244 (41%), Gaps = 54/244 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+ L   GEV+ WG +  GQ+G  S    +Q IP++V      S +Q      +  
Sbjct: 135 GSHHSMVLTCDGEVYAWGYNNSGQVG--SGSTANQPIPRKV-----TSCLQ------NKT 181

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V+    G   S+A+ D GEV+ WG + +GQLGL S+   +Q  P R+  L  + V Q   
Sbjct: 182 VIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSG--NQPTPCRIAALQGIRVEQVVC 239

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  GV                                      +Y WG N Y
Sbjct: 240 GYAHTLALTDEGV--------------------------------------MYAWGANSY 261

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G  N +   + P +V       + + AC ++H+        ++Y +G      + +P
Sbjct: 262 GQLGTGNKSNQ-SYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQCRGQSVITP 320

Query: 243 KSVH 246
              H
Sbjct: 321 HLTH 324



 Score = 55.1 bits (131), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 40/167 (23%)

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
           EVF  G ++ G LG  + D +S   P+R+                   +L+   +V+ ++
Sbjct: 41  EVFVMGTNSSGCLG--TGDAQSIIEPRRID------------------MLSGKRIVSLSY 80

Query: 141 KENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRV 200
                GS P            H  I +  S GE+Y+WG+N Y Q+G  ++N  ++  Q  
Sbjct: 81  -----GSGP------------HVVIVT--SDGEVYSWGHNAYSQLGNGSTNQALSPCQVS 121

Query: 201 ESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK 247
            +L+N     +ACG++HS VL+     +YA+G  ++ Q+ S  + ++
Sbjct: 122 TNLINKKAHSVACGSHHSMVLTCD-GEVYAWGYNNSGQVGSGSTANQ 167


>gi|417411454|gb|JAA52162.1| Putative alpha-tubulin suppressor, partial [Desmodus rotundus]
          Length = 534

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 93/230 (40%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A      
Sbjct: 143 GSHHSVALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA------ 194

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V Q   
Sbjct: 195 -----CGQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNVNQLTPVRVAALHSVCVNQIVC 247

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 248 GYAHTLALTDEGL--------------------------------------LYAWGANTY 269

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N N  ++ P  +       + + AC + H+         +Y +G
Sbjct: 270 GQLGTGNKNNLLS-PAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 318



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 95/236 (40%), Gaps = 54/236 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L   + G V+ WG + + QLG  + ++              ++ +Q C       V+ 
Sbjct: 93  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-------------GIAPIQVCTNLLIKQVVE 139

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A   
Sbjct: 140 VACGSHHSVALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA--- 194

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CG   S  V  N               GE+Y WG N  GQ+
Sbjct: 195 -------------------CGQTSSMAVLDN---------------GEVYGWGYNGNGQL 220

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           G+ N+   +T P RV +L ++ +  I CG  H+  L+     LYA+G  +  QL +
Sbjct: 221 GLGNNVNQLT-PVRVAALHSVCVNQIVCGYAHTLALTDE-GLLYAWGANTYGQLGT 274



 Score = 47.0 bits (110), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 43/182 (23%)

Query: 73  SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLT 131
           +L + D  EVF +G +    LG  + D +S  IPK+++ L    +     G   H L+ T
Sbjct: 41  ALYVTDNDEVFVFGLNYSNCLG--TGDNQSTLIPKKLEALCGKKIKSLSYGSGPHVLLST 98

Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
             GVV                                      Y WG+N Y Q+G   +N
Sbjct: 99  EDGVV--------------------------------------YAWGHNGYSQLGNGTTN 120

Query: 192 TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQ 250
             +   Q   +L+   +  +ACG++HS  L+     ++A+G  +  Q+ S  + ++ TP+
Sbjct: 121 QGIAPIQVCTNLLIKQVVEVACGSHHSVALAAD-GEVFAWGYNNCGQVGSGSTANQPTPR 179

Query: 251 LI 252
            +
Sbjct: 180 KV 181


>gi|242071255|ref|XP_002450904.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
 gi|241936747|gb|EES09892.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
          Length = 418

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 116/269 (43%), Gaps = 37/269 (13%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS A+   G++F WG ++ GQLGL     K  S P +V  L    +     G  H     
Sbjct: 129 HSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDFRIKMVALGSEH----- 183

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLG-------LESADKKSQSIPKRVKGLASVSVV 118
                  S+A+ + GEV +WG    G+LG       L  +   S+  P+ +K    + + 
Sbjct: 184 -------SIAVTEEGEVLSWGAAGSGRLGHGRQSSILGFSLTTSEYTPRLIKNFDGIKIK 236

Query: 119 QACAGYSHCLVLTSSGV--VTCTHKENGCGSDPSQGVQSNLVQD-----------SHTTI 165
           +  AG  H   +   G   +     E G G   ++  + N+V++            HT +
Sbjct: 237 KIAAGMLHSACIDEKGTLFIFGQKTEKGFGRS-NEAFRPNIVEEIPFSEEVACGGYHTCV 295

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +   G+LY+WG+NE G +G+  ++   +      SL  LP++ ++CG  H+ V+S   
Sbjct: 296 --VTDSGDLYSWGSNENGCLGLGGTDMVCSPEILKSSLFKLPVSKVSCGWKHTAVISG-- 351

Query: 226 SRLYAFGIGSAVQLDSPKSVHKTPQLIHG 254
             +Y +G G A      +      QL HG
Sbjct: 352 DDIYTWGWGGANGTFFEEGHSSGGQLGHG 380



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 101/253 (39%), Gaps = 49/253 (19%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+L L   G VF  G +  GQLG+ S+   +   P  V G              H  V+ 
Sbjct: 77  HTLFLTQSGRVFATGLNDFGQLGVGSSVTHTLE-PVEVSGF-------------HERVVE 122

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
            + G  HS A+   G++F WG ++ GQLGL     K  S P +V  L    +     G  
Sbjct: 123 VSAGNHHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDFRIKMVALGSE 182

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTT--------------------- 164
           H + +T  G V  +    G G     G QS+++  S TT                     
Sbjct: 183 HSIAVTEEGEVL-SWGAAGSGR-LGHGRQSSILGFSLTTSEYTPRLIKNFDGIKIKKIAA 240

Query: 165 ----ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIA-LIACGANHSF 219
                  ++  G L+ +G     + G   SN    +P  VE    +P +  +ACG  H+ 
Sbjct: 241 GMLHSACIDEKGTLFIFGQKT--EKGFGRSNEAF-RPNIVE---EIPFSEEVACGGYHTC 294

Query: 220 VLSKSVSRLYAFG 232
           V++ S   LY++G
Sbjct: 295 VVTDS-GDLYSWG 306


>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 754

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 112/242 (46%), Gaps = 40/242 (16%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL   G V++WG + +GQLG  + +     +P +V+GL  V  +             
Sbjct: 358 HSLALKKDGTVWSWGNNYYGQLG--NGNSIDSYVPVQVRGLKDVVAI------------- 402

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
             TG  HSLAL   G V+ WG +  GQLG  +   KS  +P +VKGL    VV   AG  
Sbjct: 403 -ATGNAHSLALKKDGTVWAWGNNEFGQLG--NGTNKSSFVPVQVKGLK--DVVAIAAGSD 457

Query: 126 HCLVLTSSGVV-TCTHKENGCGSDPSQG--------VQSNLVQDSHTTIT------SLNS 170
           H L     G V    + E G   + S G        VQ   ++D            +L  
Sbjct: 458 HSLAFKKDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQVKGLKDVVAVAAGSVHSLALKK 517

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
            G ++ WG+N +G +G +   + V  P +V+ L +  +  IA G+NHS VL K    ++A
Sbjct: 518 DGTIWAWGSNYHGLLGNDIERSFV--PVQVKGLKD--VVAIAAGSNHSLVLKKD-GTVWA 572

Query: 231 FG 232
           +G
Sbjct: 573 WG 574



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 120/298 (40%), Gaps = 68/298 (22%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           TG  HSLAL   G V+ WG +  GQLG  +   KS  +P +VKGL    VV   AG  H 
Sbjct: 404 TGNAHSLALKKDGTVWAWGNNEFGQLG--NGTNKSSFVPVQVKGLK--DVVAIAAGSDHS 459

Query: 62  LVLTSTTGLW-----------------------------------------HSLALNDCG 80
           L       +W                                         HSLAL   G
Sbjct: 460 LAFKKDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQVKGLKDVVAVAAGSVHSLALKKDG 519

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
            ++ WG + HG LG    D +   +P +VKGL    VV   AG +H LVL   G V    
Sbjct: 520 TIWAWGSNYHGLLG---NDIERSFVPVQVKGLK--DVVAIAAGSNHSLVLKKDGTVWAWG 574

Query: 141 K-------ENGCGSDPSQGVQSNLVQD-------SHTTITSLNSPGELYTWGNNEYGQMG 186
           +       EN      S  VQ   ++D        H ++  L   G ++ WG+N +GQ+G
Sbjct: 575 EVWFDLLNENSRLVYSSVPVQIKGLKDVVAIAAGEHHSL-GLKKDGTVWAWGDNFFGQLG 633

Query: 187 INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
            +        P +V+ L +  I  IA G  HS  + K    ++A+G  S  QL +  S
Sbjct: 634 NSPREKYSLVPVQVKGLKD--ILAIATGEWHSLAIKKD-GTVWAWGENSTGQLGNETS 688



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 132/305 (43%), Gaps = 51/305 (16%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G +HSLAL   G V+ WG +  GQ G E    +S  IP +VKGL  V  + A       
Sbjct: 53  AGNYHSLALKGDGTVWAWGWNHWGQCGTE----ESSIIPVKVKGLKDVVAIAA------- 101

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                  G +HSL L   G V+ WG +  GQLG   A + S  +P +VKGL  V  + A 
Sbjct: 102 -------GRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYS-IVPVQVKGLKDVVAIAAG 153

Query: 122 AGYSHCLVLTSSGVVTCTHKE------NGCGSDPSQGVQSNLVQDSHTTIT------SLN 169
            GYS  L L   G V C          +G   D S   Q   ++D            +L 
Sbjct: 154 DGYS--LGLKKDGTVWCWGLNESIQVIDGSNKDFSVPFQIKGLKDVVAIAAGKDYSLALK 211

Query: 170 SPGELYTW--GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
             G ++ W    N Y Q+    ++     P +VE L +  +  IA G  HS  L K    
Sbjct: 212 KDGTVWMWEYKYNYYEQL-RRGADEYSPVPVQVEGLKD--VVAIAAGRYHSLALKKD-GT 267

Query: 228 LYAFGIGSAVQLDSPKSVHK-TPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKK---IY 283
           ++A+G     QL + KS     P  +    +   VA+ AGE+    HS  L +KK   I+
Sbjct: 268 VWAWGNNYYGQLGNGKSEDSYDPVQVKN--LKDVVAIAAGEN----HS--LALKKDGTIW 319

Query: 284 SGGDH 288
           + GD+
Sbjct: 320 AWGDN 324



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 66/132 (50%), Gaps = 18/132 (13%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSL L   G V+ WG +  GQLG  S  +K   +P +VKGL  +              L 
Sbjct: 611 HSLGLKKDGTVWAWGDNFFGQLG-NSPREKYSLVPVQVKGLKDI--------------LA 655

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS-IPKRVKGLASVSVVQACAGY 124
             TG WHSLA+   G V+ WG ++ GQLG E++ K   S +P +VKG+  V  +   AG 
Sbjct: 656 IATGEWHSLAIKKDGTVWAWGENSTGQLGNETSGKDKYSYVPVQVKGIKDVLAI--SAGS 713

Query: 125 SHCLVLTSSGVV 136
            H L L   G V
Sbjct: 714 YHSLALKKDGTV 725



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 124/314 (39%), Gaps = 63/314 (20%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +SL L   G V+ WG   +  + +     K  S+P ++KGL  V  + A   YS  L   
Sbjct: 156 YSLGLKKDGTVWCWG--LNESIQVIDGSNKDFSVPFQIKGLKDVVAIAAGKDYSLALKKD 213

Query: 66  STTGLW--------------------------------------HSLALNDCGEVFTWGG 87
            T  +W                                      HSLAL   G V+ WG 
Sbjct: 214 GTVWMWEYKYNYYEQLRRGADEYSPVPVQVEGLKDVVAIAAGRYHSLALKKDGTVWAWGN 273

Query: 88  DTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC--THKENGC 145
           + +GQLG  +   +    P +VK L    VV   AG +H L L   G +     ++    
Sbjct: 274 NYYGQLG--NGKSEDSYDPVQVKNLK--DVVAIAAGENHSLALKKDGTIWAWGDNEWGQL 329

Query: 146 GSDPSQG----VQSNLVQDSHTTIT------SLNSPGELYTWGNNEYGQMGINNSNTTVT 195
           G+  S+     VQ   ++D            +L   G +++WGNN YGQ+G  NS  +  
Sbjct: 330 GNSISEKLCVPVQFKSLKDVVAIAAGCEHSLALKKDGTVWSWGNNYYGQLGNGNSIDSYV 389

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
            P +V  L +  +  IA G  HS  L K    ++A+G     QL +  +     P  + G
Sbjct: 390 -PVQVRGLKD--VVAIATGNAHSLALKKD-GTVWAWGNNEFGQLGNGTNKSSFVPVQVKG 445

Query: 255 PWIASPVAMTAGED 268
             +   VA+ AG D
Sbjct: 446 --LKDVVAIAAGSD 457



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 51/94 (54%), Gaps = 15/94 (15%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS-IPKRVKGLASVSVVQACAGYSH 60
           TG WHSLA+   G V+ WG ++ GQLG E++ K   S +P +VKG+              
Sbjct: 658 TGEWHSLAIKKDGTVWAWGENSTGQLGNETSGKDKYSYVPVQVKGIKD------------ 705

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLG 94
             VL  + G +HSLAL   G V+ WG +  GQLG
Sbjct: 706 --VLAISAGSYHSLALKKDGTVWGWGANARGQLG 737



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 84/207 (40%), Gaps = 50/207 (24%)

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           ++    G +HSLAL   G V+ WG +  GQ G E    +S  IP +VKGL    VV   A
Sbjct: 48  IIQIAAGNYHSLALKGDGTVWAWGWNHWGQCGTE----ESSIIPVKVKGLK--DVVAIAA 101

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H L L   G V                                      + WG+N+ 
Sbjct: 102 GRYHSLTLKKDGTV--------------------------------------WAWGSNKD 123

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQ-LDS 241
           GQ+G  ++      P +V+ L +  +  IA G  +S  L K    ++ +G+  ++Q +D 
Sbjct: 124 GQLGNRDAGEYSIVPVQVKGLKD--VVAIAAGDGYSLGLKKD-GTVWCWGLNESIQVIDG 180

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED 268
                  P  I G  +   VA+ AG+D
Sbjct: 181 SNKDFSVPFQIKG--LKDVVAIAAGKD 205


>gi|221121563|ref|XP_002161160.1| PREDICTED: ubiquitin-protein ligase E3A-like [Hydra magnipapillata]
          Length = 777

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 22/191 (11%)

Query: 902  VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQ 961
            + Y  F    L    ++ +DY    S   +G+ +    ++PF+     KT  L  D R++
Sbjct: 347  IPYDDFINDCLNDAIEMSVDY----SNFKHGNDKFSFLHFPFVLKTSTKTLGLFYDNRVR 402

Query: 962  MEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIREL---AQYTTNDFKKPLKV 1018
            M      T     LQ    H  + YL++ V RD++++D++  L   AQ    DFKK   V
Sbjct: 403  MYSERRITLLTGLLQG---HIPSPYLKLVVRRDHLIQDSLVGLEMVAQDEPEDFKKQFFV 459

Query: 1019 NDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDT 1078
                        +F GE+  D GGV +EF  L+++E+ +P +GMF   E TR+ WF   +
Sbjct: 460  ------------EFEGEQGIDEGGVSKEFFQLIIEELFNPDFGMFTLNETTRTYWFHPTS 507

Query: 1079 FEDQNMYFLIG 1089
            FE  + + LIG
Sbjct: 508  FEAASQFMLIG 518



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKD 785
           E TR+ WF   +FE  +   LIG L G+AIYN  I+++ FP  LY+K+L      +DL  
Sbjct: 496 ETTRTYWFHPTSFEAASQFMLIGVLFGIAIYNSIILDVRFPAVLYRKLLGYSGKFEDLSS 555

Query: 786 LSPTLAKSLQDILDYREPDLEDV---FGITFRNWY 817
             P +  SL  +L Y     ED+   F I++ + +
Sbjct: 556 SHPEIYFSLNQLLSYNGNVKEDIMASFQISYSDMF 590


>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
          Length = 1099

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 109/228 (47%), Gaps = 19/228 (8%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WH+  +   G++FT+G  T G LG    D+KS S+P+ ++ L  +  VQA  G  H  
Sbjct: 420 GPWHTAVVTSSGQLFTFGDGTFGVLG--HGDRKSVSLPREIESLKGLRTVQAACGVWHTA 477

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +        S +    G++FTWG    G+LG    DK+S+ +P RV  L   +  Q   
Sbjct: 478 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG--HGDKESKLVPTRVVTLDEPNFCQVAC 535

Query: 123 GYSHCLVLTSSGVV----TCTH------KENGCGSDPSQG-VQSNLVQD---SHTTITSL 168
           G+S  + L+  G V    +C +      + +G    P +G +  + V++       +  L
Sbjct: 536 GHSMTVALSRLGHVYTMGSCVYGHLGNTQADGKLPTPVEGKLSKSFVEEIACGAYHVAVL 595

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN 216
            S  E++TWG    G +G  ++N   T P  VE+L +  +  IACG N
Sbjct: 596 TSRTEVFTWGKGANGCLGHGDTNDRNT-PTLVEALKDKQVKSIACGTN 642



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 111/253 (43%), Gaps = 43/253 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYSHC 61
           G +H+ A+   G+++TWG  T+    L   ++ S  +PKRV G L  + V          
Sbjct: 365 GEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVS--------- 415

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              + + G WH+  +   G++FT+G  T G LG    D+KS S+P+ ++ L  +  VQA 
Sbjct: 416 ---SISCGPWHTAVVTSSGQLFTFGDGTFGVLG--HGDRKSVSLPREIESLKGLRTVQAA 470

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G  H   +    V                            + +S  S G+L+TWG+ +
Sbjct: 471 CGVWHTAAVVEVMV--------------------------GNSSSSNCSSGKLFTWGDGD 504

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
            G++G  +  + +  P RV +L       +ACG + +  LS+ +  +Y  G      L +
Sbjct: 505 KGRLGHGDKESKLV-PTRVVTLDEPNFCQVACGHSMTVALSR-LGHVYTMGSCVYGHLGN 562

Query: 242 PKSVHKTPQLIHG 254
            ++  K P  + G
Sbjct: 563 TQADGKLPTPVEG 575



 Score = 45.4 bits (106), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 5/87 (5%)

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           GE+++WG    G++G +  ++ V  P+ +ESL N  I L+ACG  H+  ++ S   LY +
Sbjct: 324 GEVFSWGGESGGRLG-HGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLS-GDLYTW 381

Query: 232 GIGS---AVQLDSPKSVHKTPQLIHGP 255
           G G+    +     +  H  P+ ++GP
Sbjct: 382 GDGTYNYGLLGHGNQVSHWVPKRVNGP 408


>gi|348583549|ref|XP_003477535.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Cavia
           porcellus]
          Length = 531

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 94/244 (38%), Gaps = 54/244 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     V  V   A      
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHVKRVVGIA------ 187

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L  V V Q   
Sbjct: 188 -----CGQTSSMAVLDSGEVYGWGYNGNGQLGL--GNNGNQLTPMRVAALHRVCVNQIVC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 241 GYAHTLALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G  N N  +  P+ +       + + AC + H          +Y +G      +  P
Sbjct: 263 GQLGTGNKN-NLLNPEHIMVEKERVVEIAACHSTHISAAKTQGGHVYMWGQCRGQSVTLP 321

Query: 243 KSVH 246
              H
Sbjct: 322 HLTH 325



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 96/236 (40%), Gaps = 54/236 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L   + G V+ WG + + QLG  + ++              ++ +Q C       V+ 
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-------------GIAPIQVCTNLLIKQVVE 132

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     V  V   A   
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHVKRVVGIA--- 187

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CG   S  V              L+S GE+Y WG N  GQ+
Sbjct: 188 -------------------CGQTSSMAV--------------LDS-GEVYGWGYNGNGQL 213

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           G+ N+   +T P RV +L  + +  I CG  H+  L+     LYA+G  +  QL +
Sbjct: 214 GLGNNGNQLT-PMRVAALHRVCVNQIVCGYAHTLALTDE-GLLYAWGANTYGQLGT 267



 Score = 46.6 bits (109), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 43/182 (23%)

Query: 73  SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLT 131
           +L + D  EVF +G +    LG  + D +S  +PK+++ L    +     G   H L+ T
Sbjct: 34  ALYVTDNDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91

Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
             GVV                                      Y WG+N Y Q+G   +N
Sbjct: 92  EDGVV--------------------------------------YAWGHNGYSQLGNGTTN 113

Query: 192 TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQ 250
             +   Q   +L+   +  +ACG++HS  L+     ++A+G  +  Q+ S  + ++ TP+
Sbjct: 114 QGIAPIQVCTNLLIKQVVEVACGSHHSMALAAD-GEVFAWGYNNCGQVGSGSTANQPTPR 172

Query: 251 LI 252
            +
Sbjct: 173 KV 174


>gi|76678806|ref|XP_586049.2| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
           [Bos taurus]
          Length = 425

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 96/244 (39%), Gaps = 54/244 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A      
Sbjct: 43  GSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA------ 94

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V Q   
Sbjct: 95  -----CGQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVNQIVC 147

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 148 GYAHTLALTDEGL--------------------------------------LYAWGANTY 169

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G  N N  ++ P  +       I + AC + H+         +Y +G      +  P
Sbjct: 170 GQLGTGNKNNLLS-PAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLP 228

Query: 243 KSVH 246
              H
Sbjct: 229 HLTH 232



 Score = 43.5 bits (101), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 2/82 (2%)

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G +Y WG+N Y Q+G   +N  +   Q   +L+   +  +ACG++HS  L+     ++A+
Sbjct: 1   GVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAAD-GEVFAW 59

Query: 232 GIGSAVQLDSPKSVHK-TPQLI 252
           G  +  Q+ S  + ++ TP+ +
Sbjct: 60  GYNNCGQVGSGSTANQPTPRKV 81


>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
           CCMP2712]
          Length = 413

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 131/253 (51%), Gaps = 36/253 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H L +   G+V++ G + HGQLGL S  K S S+   V+ L  V V+ A   Y H +
Sbjct: 144 GAEHVLVVTSAGQVYSCGCNNHGQLGLGST-KMSPSL-LLVESLKHVRVLSASCSYHHSV 201

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ--A 120
           V++S  G   S  LNDCG           QLG+    + +Q +P RV+ L S  +V+  A
Sbjct: 202 VVSSD-GSAFSFGLNDCG-----------QLGI--GTRPNQLLPHRVE-LPSPHLVRLAA 246

Query: 121 CAGYSHCLVLTSSGVV-TCTHKENG---CGSDPSQGVQ----------SNLVQDSHTTIT 166
           C  Y H + LT  G+V +C    NG    GS  S  V           ++++   ++   
Sbjct: 247 CGQY-HTIFLTEEGMVFSCGKNLNGQLGLGSRSSTNVPTLIAALQERPASMIACGYSHTC 305

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
            +   G+L+T+G N  GQ+G+ ++++ V+ P +VE+L N+ +  I+CG + + VLS+S  
Sbjct: 306 VVLEDGKLFTFGYNHQGQLGLGHTDS-VSSPMQVETLRNVKVVKISCGTHFTCVLSES-G 363

Query: 227 RLYAFGIGSAVQL 239
            L++FG     QL
Sbjct: 364 ELWSFGCNCHGQL 376


>gi|46249868|gb|AAH68834.1| LOC398469 protein [Xenopus laevis]
          Length = 530

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 108/248 (43%), Gaps = 59/248 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV-KGLASVSVVQACAGYSHC 61
           G  HS+AL   GEVF+WG +  GQ+G  S    +QS+P++V   L S  VV   AG +  
Sbjct: 136 GSHHSMALTSDGEVFSWGYNNCGQVG--SGTTANQSVPRKVASSLQSKVVVSISAGQT-- 191

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      S+AL D G V+ WG +  GQLGL   +  +Q +P R+     + ++Q  
Sbjct: 192 ----------SSMALTDNGHVYGWGYNGTGQLGL--GNTGNQLMPCRLVFAQPICIIQVV 239

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            GY+H L L+  GV                                      LY WG N 
Sbjct: 240 LGYAHTLALSDQGV--------------------------------------LYAWGANS 261

Query: 182 YGQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           +GQ+GI N SN TV  P +V +   + + + AC + +         ++Y +G+     L 
Sbjct: 262 HGQLGIGNKSNQTV--PVKVGTNERM-VEVTACHSTNISAAKSQSGQVYMWGLCRGQCLL 318

Query: 241 SPKSVHKT 248
           SP   H T
Sbjct: 319 SPHLTHFT 326



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 58/103 (56%), Gaps = 3/103 (2%)

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
           N  GE+Y+WG+N Y Q+G  N+    T  Q    L++  +  +ACG++HS  L+ S   +
Sbjct: 91  NEDGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALT-SDGEV 149

Query: 229 YAFGIGSAVQLDSPKSVHKT-PQLIHGPWIAS-PVAMTAGEDS 269
           +++G  +  Q+ S  + +++ P+ +     +   V+++AG+ S
Sbjct: 150 FSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVSISAGQTS 192


>gi|432106315|gb|ELK32196.1| RCC1 and BTB domain-containing protein 1 [Myotis davidii]
          Length = 531

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 93/230 (40%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A      
Sbjct: 136 GSHHSVALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA------ 187

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V Q   
Sbjct: 188 -----CGQTSSMAVLDTGEVYGWGYNGNGQLGL--GNNVNQLTPVRVAALHSVCVNQIVC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 241 GYAHTLALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N N  ++ P  +       + + AC + H+         +Y +G
Sbjct: 263 GQLGTGNKNNLLS-PTHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 45.1 bits (105), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 2/82 (2%)

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G +Y WG+N Y Q+G   +N  +   Q   +L+   +  +ACG++HS  L+     ++A+
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAAD-GEVFAW 152

Query: 232 GIGSAVQLDSPKSVHK-TPQLI 252
           G  +  Q+ S  + ++ TP+ +
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKV 174


>gi|395859036|ref|XP_003801852.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
           [Otolemur garnettii]
          Length = 531

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 93/230 (40%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A      
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA------ 187

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V Q   
Sbjct: 188 -----CGQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVNQIVC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 241 GYAHTLALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N N  ++ P  +       + + AC + H+         +Y +G
Sbjct: 263 GQLGTGNKNNLLS-PAHIMVEKERIVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 95/236 (40%), Gaps = 54/236 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L   + G V+ WG + + QLG  + ++              ++ +Q C       V+ 
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-------------GIAPIQVCTNLLIKQVVE 132

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A   
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA--- 187

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CG   S  V  N               GE+Y WG N  GQ+
Sbjct: 188 -------------------CGQTSSMAVLDN---------------GEVYGWGYNGNGQL 213

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           G+ N+   +T P RV +L ++ +  I CG  H+  L+     LYA+G  +  QL +
Sbjct: 214 GLGNNGNQLT-PVRVAALHSVCVNQIVCGYAHTLALTDE-GLLYAWGANTYGQLGT 267



 Score = 47.4 bits (111), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 46/194 (23%)

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
           C+  TS +    +L + D  EVF +G +    LG  + D +S  +PK+++ L    +   
Sbjct: 25  CVFGTSAS---EALYVTDSDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEALCGKKIKSL 79

Query: 121 CAGYS-HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGN 179
             G   H L+ T  GVV                                      Y WG+
Sbjct: 80  SYGSGPHVLLSTEDGVV--------------------------------------YAWGH 101

Query: 180 NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           N Y Q+G   +N  +   Q   +L+   +  +ACG++HS  L+     ++A+G  +  Q+
Sbjct: 102 NGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAAD-GEVFAWGYNNCGQV 160

Query: 240 DSPKSVHK-TPQLI 252
            S  + ++ TP+ +
Sbjct: 161 GSGSTANQPTPRKV 174


>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
          Length = 448

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 125/266 (46%), Gaps = 41/266 (15%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LA+   G V +WG + +GQLGL   + +   +P++++    V V    AG  H   +T
Sbjct: 140 HCLAVTVAGHVHSWGRNQNGQLGL--GNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVT 197

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                         G+++ WG   +G LGL   D+  + IP++V  +    +V    G+ 
Sbjct: 198 ED------------GDLYGWGWGRYGNLGL--GDRDDRLIPEKVSSVNGQKMVLVACGWR 243

Query: 126 HCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTIT----------SLNSP 171
           H + ++SSG +       + + G G      V   L     TTI+          +L + 
Sbjct: 244 HTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAAD 303

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLP----IALIACGANHSFVLSKSVSR 227
           G+LY WG N++GQ+G+ ++    +  Q     VN P    +  +ACG  H+  L+++   
Sbjct: 304 GKLYGWGWNKFGQVGVGDNEDHCSPVQ-----VNFPNEQKVVQVACGWRHTLALTEA-KN 357

Query: 228 LYAFGIGSAVQLDSPKSVHKT-PQLI 252
           ++++G G++ QL   + V +  P++I
Sbjct: 358 VFSWGRGTSGQLGHGEIVDRNIPKMI 383



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 113/253 (44%), Gaps = 29/253 (11%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS+AL   G V +WG    GQLG    D + + +P     + + +   A  G +  
Sbjct: 27  AGASHSVALLSGGVVCSWGRGEDGQLG--HGDAEDRPVPT----VLTAAFDDAPGGVASV 80

Query: 62  LVLTSTTGLWHSLALNDCG-EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
           ++  +     H+ A +D   ++++WG    G+LG    +      P+ ++ L  V + Q 
Sbjct: 81  VICGAD----HTTAYSDEELQLYSWGWGDFGRLG--HGNSSDVFNPQPIQALQGVRITQI 134

Query: 121 CAGYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTIT 166
             G SHCL +T +G V    +      G G+             +GV+  ++        
Sbjct: 135 ACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTA 194

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           ++   G+LY WG   YG +G+ + +  +  P++V S+    + L+ACG  H+  +S S S
Sbjct: 195 AVTEDGDLYGWGWGRYGNLGLGDRDDRLI-PEKVSSVNGQKMVLVACGWRHTITVSSSGS 253

Query: 227 RLYAFGIGSAVQL 239
            +Y +G     QL
Sbjct: 254 -IYTYGWSKYGQL 265



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 63/142 (44%), Gaps = 25/142 (17%)

Query: 1   MTGLW-HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 59
           ++G W H++AL   G+++ WG +  GQ+G+   D +    P +V       VVQ   G+ 
Sbjct: 290 ISGGWRHTMALAADGKLYGWGWNKFGQVGV--GDNEDHCSPVQVNFPNEQKVVQVACGWR 347

Query: 60  HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ 119
           H L LT                VF+WG  T GQLG    +   ++IPK +  L+S     
Sbjct: 348 HTLALTEAK------------NVFSWGRGTSGQLG--HGEIVDRNIPKMIDALSSDG--- 390

Query: 120 ACAGYSHCLVLTSSGVVTCTHK 141
                S C  L SS  V  + K
Sbjct: 391 -----SACKQLESSKAVPMSAK 407



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 21/143 (14%)

Query: 116 SVVQACAGYSHCLVLTSSGVV-TCTHKENG------------------CGSDPSQGVQSN 156
           SVV   AG SH + L S GVV +    E+G                     D   GV S 
Sbjct: 21  SVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASV 80

Query: 157 LVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN 216
           ++  +  T    +   +LY+WG  ++G++G  NS + V  PQ +++L  + I  IACG +
Sbjct: 81  VICGADHTTAYSDEELQLYSWGWGDFGRLGHGNS-SDVFNPQPIQALQGVRITQIACGDS 139

Query: 217 HSFVLSKSVSRLYAFGIGSAVQL 239
           H   ++ +   ++++G     QL
Sbjct: 140 HCLAVTVA-GHVHSWGRNQNGQL 161


>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
          Length = 306

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 73/252 (28%), Positives = 112/252 (44%), Gaps = 32/252 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+  L + GEVFT+G    GQLG  ++   + S P  V  L    V Q   G+    
Sbjct: 47  GNQHTAILMENGEVFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWH--- 103

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    H+ AL D G+++TWG   +G+LG    D+  Q+ PK V+ L    V    A
Sbjct: 104 ---------HTCALIDNGQLYTWGSGEYGRLG--HGDEVRQASPKLVESLQGKEVTFVAA 152

Query: 123 GYSHCLVLTSSGVV---------TCTHKENGCGSDPS--QGVQSNLVQD----SHTTITS 167
           G  H  V+   G +            H +      P   +GVQ  +  +    +H T+  
Sbjct: 153 GGFHSSVIIEGGNLLTWGGGYFGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLM- 211

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           L    E++TWG+ E+G++GI +      +P  + +L  + +  I+ G  HS  L+ S   
Sbjct: 212 LTQSQEVWTWGSGEFGKLGIGDEEKH-AEPIMITALQGVGVIHISTGGFHSAALT-SEGV 269

Query: 228 LYAFGIGSAVQL 239
           LY +G G   QL
Sbjct: 270 LYTWGGGDKGQL 281



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 68/241 (28%), Positives = 97/241 (40%), Gaps = 55/241 (22%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
           EV++WG    GQLG    D+K+Q  P+ V      +V Q   G  H  +L          
Sbjct: 7   EVYSWGQGVLGQLG--HGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMEN------- 57

Query: 75  ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG 134
                GEVFT+G    GQLG  ++   + S P  V  L    V Q   G+ H        
Sbjct: 58  -----GEVFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHH-------- 104

Query: 135 VVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTV 194
             TC   +N                            G+LYTWG+ EYG++G +      
Sbjct: 105 --TCALIDN----------------------------GQLYTWGSGEYGRLG-HGDEVRQ 133

Query: 195 TKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL-DSPKSVHKTPQLIH 253
             P+ VESL    +  +A G  HS V+ +    L  +G G   QL    ++  KTP+++ 
Sbjct: 134 ASPKLVESLQGKEVTFVAAGGFHSSVIIEG-GNLLTWGGGYFGQLGHGDETDRKTPKMVK 192

Query: 254 G 254
           G
Sbjct: 193 G 193



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 89/204 (43%), Gaps = 30/204 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+ AL D G+++TWG   +G+LG    D+  Q+ PK V+ L    V    AG     
Sbjct: 101 GWHHTCALIDNGQLYTWGSGEYGRLG--HGDEVRQASPKLVESLQGKEVTFVAAGG---- 154

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                   +HS  + + G + TWGG   GQLG    D+  +  PK VKG+      +   
Sbjct: 155 --------FHSSVIIEGGNLLTWGGGYFGQLG--HGDETDRKTPKMVKGVQQCIAHEVAC 204

Query: 123 GYSHCLVLTSSGVV----TCTHKENGCGSDPS----------QGVQSNLVQDSHTTITSL 168
           G  H L+LT S  V    +    + G G +            QGV    +        +L
Sbjct: 205 GTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHAEPIMITALQGVGVIHISTGGFHSAAL 264

Query: 169 NSPGELYTWGNNEYGQMGINNSNT 192
            S G LYTWG  + GQ+G  + N+
Sbjct: 265 TSEGVLYTWGGGDKGQLGHGDENS 288



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 16/104 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+L L    EV+TWG    G+LG+   D++  + P  +  L  V V+          
Sbjct: 205 GTHHTLMLTQSQEVWTWGSGEFGKLGI--GDEEKHAEPIMITALQGVGVIHI-------- 254

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP 106
               +TG +HS AL   G ++TWGG   GQLG    D+ SQ+IP
Sbjct: 255 ----STGGFHSAALTSEGVLYTWGGGDKGQLG--HGDENSQNIP 292


>gi|27695022|gb|AAH43960.1| LOC398469 protein, partial [Xenopus laevis]
          Length = 589

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 108/248 (43%), Gaps = 59/248 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV-KGLASVSVVQACAGYSHC 61
           G  HS+AL   GEVF+WG +  GQ+G  S    +QS+P++V   L S  VV   AG +  
Sbjct: 195 GSHHSMALTSDGEVFSWGYNNCGQVG--SGTTANQSVPRKVASSLQSKVVVSISAGQT-- 250

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      S+AL D G V+ WG +  GQLGL   +  +Q +P R+     + ++Q  
Sbjct: 251 ----------SSMALTDNGHVYGWGYNGTGQLGL--GNTGNQLMPCRLVFAQPICIIQVV 298

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            GY+H L L+  GV                                      LY WG N 
Sbjct: 299 LGYAHTLALSDQGV--------------------------------------LYAWGANS 320

Query: 182 YGQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           +GQ+GI N SN TV  P +V +   + + + AC + +         ++Y +G+     L 
Sbjct: 321 HGQLGIGNKSNQTV--PVKVGTNERM-VEVTACHSTNISAAKSQSEQVYMWGLCRGQCLL 377

Query: 241 SPKSVHKT 248
           SP   H T
Sbjct: 378 SPHLTHFT 385



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 58/103 (56%), Gaps = 3/103 (2%)

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
           N  GE+Y+WG+N Y Q+G  N+    T  Q    L++  +  +ACG++HS  L+ S   +
Sbjct: 150 NEDGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALT-SDGEV 208

Query: 229 YAFGIGSAVQLDSPKSVHKT-PQLIHGPWIAS-PVAMTAGEDS 269
           +++G  +  Q+ S  + +++ P+ +     +   V+++AG+ S
Sbjct: 209 FSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVVVSISAGQTS 251


>gi|432095946|gb|ELK26861.1| E3 ISG15--protein ligase HERC5, partial [Myotis davidii]
          Length = 664

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/99 (44%), Positives = 62/99 (62%), Gaps = 2/99 (2%)

Query: 720 YGITEY-EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
           YG+  Y +E   +WF      ++   F  G LCGL ++N  + N+PFPLAL+KK+LD+  
Sbjct: 382 YGMFMYPKEATYMWFPVKPKFEKKRYFFFGILCGLILFNGNVANIPFPLALFKKLLDQTP 441

Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR-NW 816
            L+DLK+LSP L +SLQ +LD    D E+VF + F  NW
Sbjct: 442 SLEDLKELSPVLGRSLQILLDDESADFEEVFYVHFNVNW 480



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 12/101 (11%)

Query: 989  VEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFL 1048
            + V R +++ED + +L+Q+   D +  L             V F  E   + GGVR EF 
Sbjct: 323  LRVRRSHLIEDVLSQLSQFENEDLRMEL------------MVSFSEETGYEPGGVRTEFF 370

Query: 1049 MLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              L + +  P+YGMF   +E   +WF      ++  YF  G
Sbjct: 371  YCLFEGMTRPEYGMFMYPKEATYMWFPVKPKFEKKRYFFFG 411


>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
 gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
          Length = 526

 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 102/244 (41%), Gaps = 54/244 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+ L   GEV+ WG +  GQ+G  S    +Q IP++V      S +Q      +  
Sbjct: 135 GSHHSMVLTCDGEVYAWGYNNSGQVG--SGSTANQPIPRKV-----TSCLQ------NKT 181

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V+    G   S+A+ D GEV+ WG + +GQLGL S+   +Q  P R+  L  + V Q   
Sbjct: 182 VIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSG--NQPTPCRIAALQGIRVEQVVC 239

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  GV                                      +Y WG N Y
Sbjct: 240 GYAHTLALTDEGV--------------------------------------MYAWGANSY 261

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G  N +   + P +V       + + AC ++H+        ++Y +G      + +P
Sbjct: 262 GQLGTGNKSNQ-SYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQCRGQSVITP 320

Query: 243 KSVH 246
              H
Sbjct: 321 HLTH 324



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 42/174 (24%)

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
           L  ND  EVF  G ++ G LG  + D +S   P+R+                   +L+  
Sbjct: 36  LTKND--EVFVMGTNSSGCLG--TGDAQSILEPRRID------------------MLSGK 73

Query: 134 GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            +V+ ++     GS P            H  I +  S GE+Y+WG+N Y Q+G  ++N  
Sbjct: 74  RIVSLSY-----GSGP------------HVVIVT--SDGEVYSWGHNAYSQLGNGSTNQA 114

Query: 194 VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK 247
           ++  Q   +L+N     +ACG++HS VL+     +YA+G  ++ Q+ S  + ++
Sbjct: 115 LSPCQVSTNLINKKAISVACGSHHSMVLTCD-GEVYAWGYNNSGQVGSGSTANQ 167


>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
          Length = 526

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 102/244 (41%), Gaps = 54/244 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+ L   GEV+ WG +  GQ+G  S    +Q IP++V      S +Q      +  
Sbjct: 135 GSHHSMVLTCDGEVYAWGYNNSGQVG--SGSTANQPIPRKV-----TSCLQ------NKT 181

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V+    G   S+A+ D GEV+ WG + +GQLGL S+   +Q  P R+  L  + V Q   
Sbjct: 182 VIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSG--NQPTPCRIAALQGIRVEQVVC 239

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  GV                                      +Y WG N Y
Sbjct: 240 GYAHTLALTDEGV--------------------------------------MYAWGANSY 261

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G  N +   + P +V       + + AC ++H+        ++Y +G      + +P
Sbjct: 262 GQLGTGNKSNQ-SYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQCRGQSVITP 320

Query: 243 KSVH 246
              H
Sbjct: 321 HLTH 324



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 42/174 (24%)

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
           L  ND  EVF  G ++ G LG  + D +S   P+R+                   +L+  
Sbjct: 36  LTKND--EVFVMGTNSSGCLG--TGDAQSIIEPRRID------------------MLSGK 73

Query: 134 GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            +V+ ++     GS P            H  I +  S GE+Y+WG+N Y Q+G  ++N  
Sbjct: 74  RIVSLSY-----GSGP------------HVVIVT--SDGEVYSWGHNAYSQLGNGSTNQA 114

Query: 194 VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK 247
           ++  Q   +L+N     +ACG++HS VL+     +YA+G  ++ Q+ S  + ++
Sbjct: 115 LSPCQVSTNLINKKAISVACGSHHSMVLTCD-GEVYAWGYNNSGQVGSGSTANQ 167


>gi|325185526|emb|CCA20008.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
 gi|325188743|emb|CCA23274.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 992

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 39/208 (18%)

Query: 5   WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
           +H++ALN  G+ FTWG    G+LGLE+     +  P  VK LA V +V+  AG +H    
Sbjct: 213 FHTVALNADGQCFTWGFGKGGRLGLETQCDHLE--PALVKKLAHVFLVKVAAGENH---- 266

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESA-DKKSQSIPKRVKGLASVSVVQACAG 123
                   +LAL+  G++++WG ++ GQLG  S    +S+  PKR+  L  + V +  A 
Sbjct: 267 --------TLALSQNGQLYSWGSNSFGQLGHSSKCTLESRLFPKRIDALRGLIVREIAAS 318

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
            SH   +              C S  S  +  +  QD+        +  EL+TWGNN+ G
Sbjct: 319 RSHSAAI--------------CESHKSANISDDNAQDN-------GNQRELFTWGNNKKG 357

Query: 184 QMGINNSNTTV---TKPQRVESLVNLPI 208
           Q+G + +  T    + P+RV   ++ P+
Sbjct: 358 QLGRSEAFATHHGDSIPKRVNLFLSHPV 385



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 122/292 (41%), Gaps = 66/292 (22%)

Query: 59  SHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVV 118
           S C +   +   +H++ALN  G+ FTWG    G+LGLE+     +  P  VK LA V +V
Sbjct: 201 SACPITKISASKFHTVALNADGQCFTWGFGKGGRLGLETQCDHLE--PALVKKLAHVFLV 258

Query: 119 QACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWG 178
           +  AG +H L L+ +G                                      +LY+WG
Sbjct: 259 KVAAGENHTLALSQNG--------------------------------------QLYSWG 280

Query: 179 NNEYGQMGINNSNTTVTK--PQRVESLVNLPIALIACGANHSFVLSKS------------ 224
           +N +GQ+G ++  T  ++  P+R+++L  L +  IA   +HS  + +S            
Sbjct: 281 SNSFGQLGHSSKCTLESRLFPKRIDALRGLIVREIAASRSHSAAICESHKSANISDDNAQ 340

Query: 225 ----VSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGE---DSLVSHSGGL 277
                  L+ +G     QL   ++        HG  I   V +         ++ HS  +
Sbjct: 341 DNGNQRELFTWGNNKKGQLGRSEAF----ATHHGDSIPKRVNLFLSHPVLSEMLEHSDSV 396

Query: 278 VVKKIYSGGDHSIVTVTKSSDGVLSDD-FRVLNPATQILDVNFERLKECERE 328
            V +I    DH++V +  + + V     +R  N    ++ VNFE+ KE  R+
Sbjct: 397 YVNQISMAEDHTLVLLNCTRNQVSQGQVWRCGNGYFHLVRVNFEKAKETPRK 448



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 98/239 (41%), Gaps = 37/239 (15%)

Query: 15  EVFTWGGDTHGQLGLESA--DKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS-TTGLW 71
           E+FTWG +  GQLG   A       SIPKRV    S  V+     +S  + +   +    
Sbjct: 347 ELFTWGNNKKGQLGRSEAFATHHGDSIPKRVNLFLSHPVLSEMLEHSDSVYVNQISMAED 406

Query: 72  HSLALNDC-------GEVFTWGGDTHGQLGLESAD-KKSQSIPKRVKGLA--SVSVVQAC 121
           H+L L +C       G+V+  G   +G   L   + +K++  P++   LA   VS+V+  
Sbjct: 407 HTLVLLNCTRNQVSQGQVWRCG---NGYFHLVRVNFEKAKETPRKSTFLAVPPVSIVRIS 463

Query: 122 AGYSHCLVLTSSG-VVTCTHKENGCGSD---------PSQGVQ-SNL--------VQDSH 162
              +H + L S G V      +  CG D         P    +  NL        +  SH
Sbjct: 464 CARNHSMALDSRGQVYVWGSNKTACGQDVDAPAIPSYPGAPCRVKNLCSFGLVVDISASH 523

Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
                +   G+L TWG    G +G  + NT    P+RV  +       +A G  H+ +L
Sbjct: 524 DRCAIVTENGDLVTWGYGPEGSLGHGSKNTYQPHPKRVSGVKK--AVQVAAGHQHTVIL 580



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 57/128 (44%), Gaps = 18/128 (14%)

Query: 6   HSLALNDCGEVFTWGGDTH--GQLGLESADKKSQSIPKRVKGLASVS-VVQACAGYSHCL 62
           HS+AL+  G+V+ WG +    GQ     A       P RVK L S   VV   A +  C 
Sbjct: 468 HSMALDSRGQVYVWGSNKTACGQDVDAPAIPSYPGAPCRVKNLCSFGLVVDISASHDRCA 527

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           ++T              G++ TWG    G LG  S +   Q  PKRV G+     VQ  A
Sbjct: 528 IVTEN------------GDLVTWGYGPEGSLGHGSKN-TYQPHPKRVSGVK--KAVQVAA 572

Query: 123 GYSHCLVL 130
           G+ H ++L
Sbjct: 573 GHQHTVIL 580


>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
           gallopavo]
          Length = 567

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 95/230 (41%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+ L   GEV+TWG +  GQ+G  S    +Q IP+RV       VV   A    C 
Sbjct: 177 GSHHSMVLTSDGEVYTWGYNNSGQVG--SGSTANQPIPRRVTSCLQNKVVVNIACGQMC- 233

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ + GEV+ WG + +GQLGL S+   +Q  P R+  L  + V +   
Sbjct: 234 ----------SMAVVENGEVYVWGYNGNGQLGLGSSG--NQPTPCRIAALQGIRVQRVAC 281

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H LVLT  G                                      ++Y WG N Y
Sbjct: 282 GCAHTLVLTDEG--------------------------------------QIYAWGANSY 303

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N +   + P  V    +  I + AC + H+        ++Y +G
Sbjct: 304 GQLGTGNKSNQ-SYPTTVTVDKDRVIEIAACHSAHTSAAKTQSGQVYMWG 352



 Score = 56.6 bits (135), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 40/167 (23%)

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
           EVF  G +  G LG  + D +S   PKR+  L    +  AC  Y                
Sbjct: 83  EVFVLGMNCSGCLG--TGDVQSTIEPKRLDSLCGKKI--ACLSY---------------- 122

Query: 141 KENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRV 200
                GS P            H  + +    GE+YTWG+N Y Q+G   +N  +   Q  
Sbjct: 123 -----GSGP------------HVVLAT--EEGEVYTWGHNAYSQLGNGTTNHGLVPCQVS 163

Query: 201 ESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK 247
            +LVN  +  +ACG++HS VL+ S   +Y +G  ++ Q+ S  + ++
Sbjct: 164 TNLVNKKVIEVACGSHHSMVLT-SDGEVYTWGYNNSGQVGSGSTANQ 209



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 91/227 (40%), Gaps = 57/227 (25%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
           EVF  G +  G LG  + D +S   PKR+  L    +  AC  Y         +G    L
Sbjct: 83  EVFVLGMNCSGCLG--TGDVQSTIEPKRLDSLCGKKI--ACLSYG--------SGPHVVL 130

Query: 75  ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHCLVLTSS 133
           A  + GEV+TWG + + QLG  +       +P +V   L +  V++   G  H +VLTS 
Sbjct: 131 ATEE-GEVYTWGHNAYSQLG--NGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSD 187

Query: 134 GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
           G                                      E+YTWG N  GQ+G + S   
Sbjct: 188 G--------------------------------------EVYTWGYNNSGQVG-SGSTAN 208

Query: 194 VTKPQRVES-LVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
              P+RV S L N  +  IACG   S  + ++   +Y +G     QL
Sbjct: 209 QPIPRRVTSCLQNKVVVNIACGQMCSMAVVEN-GEVYVWGYNGNGQL 254


>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
          Length = 527

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 100/250 (40%), Gaps = 62/250 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++AL   GEV+ WG +  GQ+G  S    +Q  P+RV       VV   A    C 
Sbjct: 136 GSHHTIALTTDGEVYAWGYNNSGQVG--SGSTANQPTPRRVSSCLQNKVVVNIACGQLC- 192

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ D GE + WG + +GQLGL   +  +Q  P R+  L  ++++Q   
Sbjct: 193 ----------SMAVLDNGETYGWGYNCNGQLGL--GNNGNQQTPCRIAALQGINIIQVAC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G V                                      Y+WG N Y
Sbjct: 241 GYAHTLALTDEGFV--------------------------------------YSWGANSY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLP----IALIACGANHSFVLSKSVSRLYAFGIGSAVQ 238
           GQ+G  N +      Q V +L+N+     + + AC  +H+        ++  +G      
Sbjct: 263 GQLGTGNKSN-----QAVPTLINMDKERMVEVAACHTSHTSAAKTQSGQVLMWGQCRGQA 317

Query: 239 LDSPKSVHKT 248
           +  P   H T
Sbjct: 318 VAYPHLTHFT 327



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 85/208 (40%), Gaps = 56/208 (26%)

Query: 8   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTST 67
           + +ND  EVF  G +  G LGL   D +S   P+R+  L    ++           L+  
Sbjct: 37  VTVND--EVFALGTNCSGCLGL--GDTQSTIEPRRIDILCGKKIIS----------LSYG 82

Query: 68  TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 127
           TG    +A  D GEV+ WG + + QLG  + +           GL               
Sbjct: 83  TGPHVVIATAD-GEVYAWGHNGYSQLGNGTTNH----------GLTPA------------ 119

Query: 128 LVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGI 187
             L S+ ++     E  CGS              H TI +L + GE+Y WG N  GQ+G 
Sbjct: 120 --LVSTNLIGKRVTEVSCGS--------------HHTI-ALTTDGEVYAWGYNNSGQVG- 161

Query: 188 NNSNTTVTKPQRVES-LVNLPIALIACG 214
           + S      P+RV S L N  +  IACG
Sbjct: 162 SGSTANQPTPRRVSSCLQNKVVVNIACG 189



 Score = 48.1 bits (113), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 43/180 (23%)

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
           + +ND  EVF  G +  G LGL   D +S   P+R+                   +L   
Sbjct: 37  VTVND--EVFALGTNCSGCLGL--GDTQSTIEPRRID------------------ILCGK 74

Query: 134 GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            +++ ++     G+ P            H  I +  + GE+Y WG+N Y Q+G   +N  
Sbjct: 75  KIISLSY-----GTGP------------HVVIAT--ADGEVYAWGHNGYSQLGNGTTNHG 115

Query: 194 VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
           +T      +L+   +  ++CG++H+  L+     +YA+G  ++ Q+ S  + ++ TP+ +
Sbjct: 116 LTPALVSTNLIGKRVTEVSCGSHHTIALTTD-GEVYAWGYNNSGQVGSGSTANQPTPRRV 174


>gi|324509125|gb|ADY43843.1| RCC1 and BTB domain-containing protein 1 [Ascaris suum]
          Length = 533

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 112/249 (44%), Gaps = 56/249 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL+  GEVF+WG +  GQLGL S             G+A   V    +G++   V+ 
Sbjct: 86  HVLALSQNGEVFSWGHNAFGQLGLGST----------TVGIAPSLVGDTLSGHN---VVQ 132

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+A+ D GE+F WG ++ GQ+G+ S    +Q +P++V G              
Sbjct: 133 IACGSHHSVAVTDRGEIFAWGRNSCGQVGIGS--NVNQDLPRQVTG-------------- 176

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           H L      VV        CG + +                +L   GE++ WG N  GQ+
Sbjct: 177 HLLNRFVRSVV--------CGQNSTM---------------ALTDGGEVFAWGFNGNGQL 213

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL--DSPK 243
           G  N +     P  V  L N+ I  IACG  HS  L+    +L+A+G  +  QL  + P+
Sbjct: 214 GAGNLSNQ-HSPALVIGLHNVVIEQIACGFAHSLALTDE-GQLFAWGSNTCGQLCANLPR 271

Query: 244 SVHKTPQLI 252
           S   +P L+
Sbjct: 272 SNQTSPVLV 280



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 59/233 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+A+ D GE+F WG ++ GQ+G+ S    +Q +P++V G              H L
Sbjct: 136 GSHHSVAVTDRGEIFAWGRNSCGQVGIGS--NVNQDLPRQVTG--------------HLL 179

Query: 63  ---VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ 119
              V +   G   ++AL D GEVF WG + +GQLG  + +  +Q  P  V GL +V + Q
Sbjct: 180 NRFVRSVVCGQNSTMALTDGGEVFAWGFNGNGQLG--AGNLSNQHSPALVIGLHNVVIEQ 237

Query: 120 ACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGN 179
              G++H L LT                                        G+L+ WG+
Sbjct: 238 IACGFAHSLALT--------------------------------------DEGQLFAWGS 259

Query: 180 NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           N  GQ+  N   +  T P  V S +   I + A  A +  V      ++Y +G
Sbjct: 260 NTCGQLCANLPRSNQTSPVLVASALGRIIEVAAVHACNITVAVNQSGKVYMWG 312



 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 97/245 (39%), Gaps = 60/245 (24%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
           GE++  G ++   LG   +    +  P R+  L+  ++V    G              H 
Sbjct: 41  GELYAIGTNSCSCLGTNRSQGTLE--PSRIDTLSGRAIVSLAYGSGP-----------HV 87

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG--LASVSVVQACAGYSHCLVLT 131
           LAL+  GEVF+WG +  GQLGL S    +  I   + G  L+  +VVQ   G  H + +T
Sbjct: 88  LALSQNGEVFSWGHNAFGQLGLGS---TTVGIAPSLVGDTLSGHNVVQIACGSHHSVAVT 144

Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
             G                                      E++ WG N  GQ+GI  SN
Sbjct: 145 DRG--------------------------------------EIFAWGRNSCGQVGI-GSN 165

Query: 192 TTVTKPQRVES-LVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPK-SVHKTP 249
                P++V   L+N  +  + CG N +  L+     ++A+G     QL +   S   +P
Sbjct: 166 VNQDLPRQVTGHLLNRFVRSVVCGQNSTMALTDG-GEVFAWGFNGNGQLGAGNLSNQHSP 224

Query: 250 QLIHG 254
            L+ G
Sbjct: 225 ALVIG 229


>gi|334186523|ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332658030|gb|AEE83430.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 1106

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 144/323 (44%), Gaps = 46/323 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+ A++  G++FTWG   H    L      S  IPKRV G   V  +Q         
Sbjct: 330 GEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSG--PVEGLQ--------- 378

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           VL+   G WHS      G++FT+G    G LG    D++S S PK VK L+ +  ++   
Sbjct: 379 VLSVACGTWHSALATANGKLFTFGDGAFGVLG--HGDRESVSYPKEVKMLSGLKTLKVAC 436

Query: 123 GYSHCL----VLTSSGVVTCTHK--------ENGCGSDPSQG------VQS------NLV 158
           G  H +    V+  +G  T + K        +N  G    +       V S      N +
Sbjct: 437 GVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQI 496

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVES-LVNLPIALIACGANH 217
              HT   +L + G ++T G   +GQ+G +NS+  +  P  V+  LV   +  I+CG +H
Sbjct: 497 ACGHTFTVALTTSGHVFTMGGTSHGQLGSSNSDGKL--PCLVQDRLVGEFVEEISCGDHH 554

Query: 218 SFVLSKSVSRLYAFGIGSAVQLD-SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGG 276
             VL+ S S ++ +G GS  +L    K   KTP L+         +++ G +   S    
Sbjct: 555 VAVLT-SRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCGSNFTSS---- 609

Query: 277 LVVKKIYSGGDHSIVTVTKSSDG 299
           + + K  SG D S+ +  + + G
Sbjct: 610 ICIHKWVSGADQSVCSGCRQAFG 632


>gi|168024283|ref|XP_001764666.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684244|gb|EDQ70648.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 401

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 115/261 (44%), Gaps = 41/261 (15%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G +HS A+++ G V+ WG +T GQLGL    K      + V+ L     +QA A     
Sbjct: 103 AGDFHSAAISEDGRVYMWGRNTQGQLGLGKRGKGKVCAAQWVESLKDFR-IQALA----- 156

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD----------KKSQSIPKRVKG 111
                  G  HSLAL++ GEV +WG   +G+LG               K S+  P+ VKG
Sbjct: 157 ------LGAEHSLALSEEGEVLSWGTSLNGRLGHGEGHRSSSMFSIFRKSSEYTPRLVKG 210

Query: 112 LASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCG---------SDPSQ-----GVQSNL 157
              V V +  AG +H   L   G +    K   C          S+P +      V+   
Sbjct: 211 FRDVKVSKVAAGLTHSACLDEQGSLFTFGKGRECQLGLGGDRDISEPKRVPVIPPVEEIA 270

Query: 158 VQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTK-PQRVE-SLVNLPIALIACGA 215
               HT   S N  G+LY WG+NEYG +G    +   T  P  VE +L +L +  + CG 
Sbjct: 271 CGGYHTGAISRN--GQLYMWGSNEYGCLGFGYKHQNATSLPMLVEGALESLRVTQVQCGW 328

Query: 216 NHSFVLSKSVSRLYAFGIGSA 236
            H+  L+     ++A+G G +
Sbjct: 329 KHTMALTVD-GDVFAWGWGGS 348



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 107/253 (42%), Gaps = 42/253 (16%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+L L + G V+  G +  GQLGL  +   S    + V+GL         A ++H     
Sbjct: 53  HTLVLTEEGRVYASGLNDWGQLGLPLSTGHSMEFLE-VEGLPDE------AKFTHI---- 101

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G +HS A+++ G V+ WG +T GQLGL    K      + V+ L    +     G  
Sbjct: 102 -AAGDFHSAAISEDGRVYMWGRNTQGQLGLGKRGKGKVCAAQWVESLKDFRIQALALGAE 160

Query: 126 HCLVLTSSGVV----TCTHKENGCGSDPS----------------------QGVQSNLVQ 159
           H L L+  G V    T  +   G G                          + V+ + V 
Sbjct: 161 HSLALSEEGEVLSWGTSLNGRLGHGEGHRSSSMFSIFRKSSEYTPRLVKGFRDVKVSKVA 220

Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
              T    L+  G L+T+G     Q+G+   +  +++P+RV   V  P+  IACG  H+ 
Sbjct: 221 AGLTHSACLDEQGSLFTFGKGRECQLGLGG-DRDISEPKRVP--VIPPVEEIACGGYHTG 277

Query: 220 VLSKSVSRLYAFG 232
            +S++  +LY +G
Sbjct: 278 AISRN-GQLYMWG 289



 Score = 41.6 bits (96), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 79/209 (37%), Gaps = 53/209 (25%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           V  WG   +G+LG  S +   +  P   K +  +  +    G +H LVLT          
Sbjct: 11  VALWGNGDYGRLGQASGESFWE--PTVCKSMQHLQPIALACGGAHTLVLT---------- 58

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
             + G V+  G +  GQLGL  +   S    + V+GL   +                   
Sbjct: 59  --EEGRVYASGLNDWGQLGLPLSTGHSMEFLE-VEGLPDEAKF----------------- 98

Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINN-SNTTV 194
              TH   G               D H+   +++  G +Y WG N  GQ+G+       V
Sbjct: 99  ---THIAAG---------------DFHS--AAISEDGRVYMWGRNTQGQLGLGKRGKGKV 138

Query: 195 TKPQRVESLVNLPIALIACGANHSFVLSK 223
              Q VESL +  I  +A GA HS  LS+
Sbjct: 139 CAAQWVESLKDFRIQALALGAEHSLALSE 167


>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
           Group]
 gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 127/266 (47%), Gaps = 41/266 (15%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LA+   G V +WG + +GQLGL   + +   +P++++    V V    AG        
Sbjct: 145 HCLAVTVAGHVHSWGRNQNGQLGL--GNTEDSLLPQKIQAFEGVRVKMIAAGAE------ 196

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 H+ A+ + G+++ WG   +G LGL   D+  + IP++V  +    +V    G+ 
Sbjct: 197 ------HTAAVTEDGDLYGWGWGRYGNLGL--GDRDDRLIPEKVSSVNGQKMVLVACGWR 248

Query: 126 HCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTIT----------SLNSP 171
           H + ++SSG +       + + G G      V   L     TTI+          +L + 
Sbjct: 249 HTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAAD 308

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLP----IALIACGANHSFVLSKSVSR 227
           G+LY WG N++GQ+G+ ++    +  Q     VN P    +  +ACG  H+  L+++   
Sbjct: 309 GKLYGWGWNKFGQVGVGDNEDHCSPVQ-----VNFPNEQKVVQVACGWRHTLALTEA-KN 362

Query: 228 LYAFGIGSAVQLDSPKSVHKT-PQLI 252
           ++++G G++ QL   + V +  P++I
Sbjct: 363 VFSWGRGTSGQLGHGEIVDRNIPKMI 388



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 113/253 (44%), Gaps = 29/253 (11%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS+AL   G V +WG    GQLG    D + + +P     + + +   A  G +  
Sbjct: 32  AGASHSVALLSGGVVCSWGRGEDGQLG--HGDAEDRPVPT----VLTAAFDDAPGGVASV 85

Query: 62  LVLTSTTGLWHSLALNDCG-EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
           ++  +     H+ A +D   ++++WG    G+LG    +      P+ ++ L  V + Q 
Sbjct: 86  VICGAD----HTTAYSDEELQLYSWGWGDFGRLG--HGNSSDVFNPQPIQALQGVRITQI 139

Query: 121 CAGYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTIT 166
             G SHCL +T +G V    +      G G+             +GV+  ++        
Sbjct: 140 ACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTA 199

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           ++   G+LY WG   YG +G+ + +  +  P++V S+    + L+ACG  H+  +S S S
Sbjct: 200 AVTEDGDLYGWGWGRYGNLGLGDRDDRLI-PEKVSSVNGQKMVLVACGWRHTITVSSSGS 258

Query: 227 RLYAFGIGSAVQL 239
            +Y +G     QL
Sbjct: 259 -IYTYGWSKYGQL 270



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 63/142 (44%), Gaps = 25/142 (17%)

Query: 1   MTGLW-HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 59
           ++G W H++AL   G+++ WG +  GQ+G+   D +    P +V       VVQ   G+ 
Sbjct: 295 ISGGWRHTMALAADGKLYGWGWNKFGQVGV--GDNEDHCSPVQVNFPNEQKVVQVACGWR 352

Query: 60  HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ 119
           H L LT                VF+WG  T GQLG    +   ++IPK +  L+S     
Sbjct: 353 HTLALTEAK------------NVFSWGRGTSGQLG--HGEIVDRNIPKMIDALSSDG--- 395

Query: 120 ACAGYSHCLVLTSSGVVTCTHK 141
                S C  L SS  V  + K
Sbjct: 396 -----SACKQLESSKAVPMSAK 412



 Score = 46.2 bits (108), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 21/143 (14%)

Query: 116 SVVQACAGYSHCLVLTSSGVV-TCTHKENG------------------CGSDPSQGVQSN 156
           SVV   AG SH + L S GVV +    E+G                     D   GV S 
Sbjct: 26  SVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASV 85

Query: 157 LVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN 216
           ++  +  T    +   +LY+WG  ++G++G  NS + V  PQ +++L  + I  IACG +
Sbjct: 86  VICGADHTTAYSDEELQLYSWGWGDFGRLGHGNS-SDVFNPQPIQALQGVRITQIACGDS 144

Query: 217 HSFVLSKSVSRLYAFGIGSAVQL 239
           H   ++ +   ++++G     QL
Sbjct: 145 HCLAVTVA-GHVHSWGRNQNGQL 166


>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1095

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 122/265 (46%), Gaps = 43/265 (16%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LA+   G V+ WG + +GQLG  +   + Q +P R  GL ++S V A           
Sbjct: 59  HTLAVRSDGTVWAWGDNAYGQLG--NGSLQDQRVPVRAWGLWNISAVGA----------- 105

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HSLA+   G V+TWGG+  GQLG        +  P +V GL    VV+  AG+S
Sbjct: 106 ---GDLHSLAMKSDGTVWTWGGNNFGQLG--DGTTTGRQAPVQVPGLG--EVVRVAAGFS 158

Query: 126 HCLVLTSSGVVTCTHKENGCG--SDPS----------QG---VQSNLVQDSHTTITSLNS 170
           H L L + G V      NG G   D +          QG   +++    ++H+   +L+ 
Sbjct: 159 HSLALKTDGTV-WAWGSNGAGRLGDGTTTQRLMPVQVQGLPTIKAIAAGNAHS--LALDG 215

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
            G ++ WG+N  GQ+G   +   +  P  V  L N     ++ G+NHS V  ++    + 
Sbjct: 216 TGRVWAWGSNSNGQLGDTTAGYRML-PALVPGLTN--ATGLSAGSNHSLV-RQADGTTWV 271

Query: 231 FGIGSAVQL-DSPKSVHKTPQLIHG 254
           +G  +  QL D   +    PQ + G
Sbjct: 272 WGANTYGQLGDGTTTSRSAPQQVSG 296



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 128/276 (46%), Gaps = 41/276 (14%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLA+   G V+TWGG+  GQLG        +  P +V GL    VV+  AG+S      
Sbjct: 109 HSLAMKSDGTVWTWGGNNFGQLG--DGTTTGRQAPVQVPGLG--EVVRVAAGFS------ 158

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 HSLAL   G V+ WG +  G+LG  +  ++   +P +V+GL ++  +   AG +
Sbjct: 159 ------HSLALKTDGTVWAWGSNGAGRLGDGTTTQR--LMPVQVQGLPTIKAI--AAGNA 208

Query: 126 HCLVLTSSG-VVTCTHKENGCGSDPSQGVQ---------SNLVQDSHTTITSL--NSPGE 173
           H L L  +G V       NG   D + G +         +N    S  +  SL   + G 
Sbjct: 209 HSLALDGTGRVWAWGSNSNGQLGDTTAGYRMLPALVPGLTNATGLSAGSNHSLVRQADGT 268

Query: 174 LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN-HSFVLSKSVSRLYAFG 232
            + WG N YGQ+G + + T+ + PQ+V  L  +   L   GA  HS VL KS   ++ +G
Sbjct: 269 TWVWGANTYGQLG-DGTTTSRSAPQQVSGLAGVDGVL---GAELHSLVL-KSDGTVWTWG 323

Query: 233 IGSAVQL-DSPKSVHKTPQLIHGPWIASPVAMTAGE 267
                QL D  +     P  + G  ++  VA+ AG 
Sbjct: 324 SNQRGQLGDGTQEQRLVPVQVMG--LSGVVAVAAGS 357



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 125/278 (44%), Gaps = 47/278 (16%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+A+   GEV+TWG +  GQLG  S+     ++PKR                SH LV  
Sbjct: 360 HSVAVMANGEVWTWGHNVEGQLGEGSSSYS--AVPKR----------------SHALVER 401

Query: 66  ST--TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG 123
           ++   G +H LA    G V+ WG +  GQLG  +  ++   +P +V GL   ++V   AG
Sbjct: 402 TSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGTTAQR--LLPTQVPGL--TNMVAVAAG 457

Query: 124 YSHCLVLTSSGVVTCTHKENGCG----------SDPSQ-----GVQSNLVQDSHTTITSL 168
           +   L L + G V     +N  G          S+P+Q     GV S      H    ++
Sbjct: 458 HHSSLALKADGTV-WAWGDNANGQLGNGSTTDRSNPTQVPGLTGVVSIAAGPGH--ALAV 514

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
            + G L+TWG+N  GQ+G     TTV +P   +      +  +A G  HS V+ K    +
Sbjct: 515 KADGTLWTWGDNNTGQLG---DGTTVDRPIPTQVPGVTGVVSVAAGLYHSLVV-KVDGTV 570

Query: 229 YAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAG 266
           +A+G     QL    +  + P     P +   VA+TAG
Sbjct: 571 WAWGSNYEGQLGGGTTTIR-PVPSQTPNLTGVVAITAG 607



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 120/264 (45%), Gaps = 41/264 (15%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            H + +   G V+TWG +  GQLG  +  ++   +P +V GL    VV   AGY+H     
Sbjct: 809  HVVVVKMDGTVWTWGNNAKGQLGDGTTTRRL--VPTQVPGL--TGVVAVAAGYAH----- 859

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                   SLAL   G V+ WG + +GQLG  +  ++    P + +GL    V+   +G  
Sbjct: 860  -------SLALKADGTVWGWGENIYGQLGDGTTTQR--VAPTQAQGL--TVVLSMASGTY 908

Query: 126  HCLVLTSSGVVTC----THKENGCGSDPSQ----------GVQSNLVQDSHTTITSLNSP 171
            H L   + G +       H + G G+  ++          GV S  +  +H    +L   
Sbjct: 909  HGLARKADGTLWAWGYNAHGQLGIGTTTTRLAPTLVPSLSGVVS--LSATHQHSLALKPD 966

Query: 172  GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
            G ++ WG N  GQ+G + + TT   P +  SL +  +  ++ G  +S  + K+   ++++
Sbjct: 967  GTVWAWGYNSNGQLG-DGTTTTRHVPTQAPSLSS--VKAVSAGFEYSLAV-KADGTVWSW 1022

Query: 232  GIGSAVQLDSPKSVHK-TPQLIHG 254
            GI    QL S  +  + TP  + G
Sbjct: 1023 GINDRGQLGSGTATPRATPTQVAG 1046



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 109/244 (44%), Gaps = 40/244 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H LA    G V+ WG +  GQLG  +  ++   +P +V GL   ++V   AG+ H  
Sbjct: 407 GRYHGLASKPDGTVWAWGDNAKGQLGDGTTAQR--LLPTQVPGL--TNMVAVAAGH-HS- 460

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     SLAL   G V+ WG + +GQLG  S   +S   P +V GL    VV   A
Sbjct: 461 ----------SLALKADGTVWAWGDNANGQLGNGSTTDRSN--PTQVPGL--TGVVSIAA 506

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PSQ-----GVQSNLVQDSHTTITSL 168
           G  H L + + G +      N    G G+      P+Q     GV S      H+ +  +
Sbjct: 507 GPGHALAVKADGTLWTWGDNNTGQLGDGTTVDRPIPTQVPGVTGVVSVAAGLYHSLVVKV 566

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
           +  G ++ WG+N  GQ+G     TT  +P   ++     +  I  G  HS  L K+   +
Sbjct: 567 D--GTVWAWGSNYEGQLG---GGTTTIRPVPSQTPNLTGVVAITAGLYHSLAL-KTDGTV 620

Query: 229 YAFG 232
           +A+G
Sbjct: 621 WAWG 624



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 32/196 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           GL+HSL +   G V+ WG +  GQLG        + +P +   L  V  +          
Sbjct: 557 GLYHSLVVKVDGTVWAWGSNYEGQLG--GGTTTIRPVPSQTPNLTGVVAI---------- 604

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
               T GL+HSLAL   G V+ WG + HGQLG  + +  +Q +P +V G +    V   A
Sbjct: 605 ----TAGLYHSLALKTDGTVWAWGYNLHGQLG--NGNTTTQQVPTQVPGFS--GGVSLGA 656

Query: 123 GYSHCLVLTSSGVV-TCTHKENGCGSDPSQGVQSNLVQDSHTTITS-----------LNS 170
           G  H L + + G V T  +   G   D +   ++   Q +  T  S           L +
Sbjct: 657 GIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPTQVAGFTGVSFLAAGEFHSVALRT 716

Query: 171 PGELYTWGNNEYGQMG 186
            G  + WG+N+ GQ+G
Sbjct: 717 DGTAWAWGSNDKGQLG 732



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 108/259 (41%), Gaps = 37/259 (14%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LA+   G ++TWG +  GQLG        + IP +V G+  V  V A           
Sbjct: 510 HALAVKADGTLWTWGDNNTGQLG--DGTTVDRPIPTQVPGVTGVVSVAA----------- 556

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              GL+HSL +   G V+ WG +  GQLG        + +P +   L    VV   AG  
Sbjct: 557 ---GLYHSLVVKVDGTVWAWGSNYEGQLG--GGTTTIRPVPSQTPNL--TGVVAITAGLY 609

Query: 126 HCLVLTSSGVVTC----THKENGCGSDPSQGVQSNLVQDSHTT--------ITSLNSPGE 173
           H L L + G V       H + G G+  +Q V + +   S             ++ + G 
Sbjct: 610 HSLALKTDGTVWAWGYNLHGQLGNGNTTTQQVPTQVPGFSGGVSLGAGIYHSLAIKTDGS 669

Query: 174 LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
           ++TWG N  GQ+G   + +  T  Q V       ++ +A G  HS  L ++    +A+G 
Sbjct: 670 VWTWGYNYRGQLGDGTTTSRTTPTQ-VAGFTG--VSFLAAGEFHSVAL-RTDGTAWAWGS 725

Query: 234 GSAVQL-DSPKSVHKTPQL 251
               QL D     H  P L
Sbjct: 726 NDKGQLGDGSARWHYAPTL 744



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 33/210 (15%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HSLAL   G V+ WG + +GQLG  +  ++    P + +GL               +VL+
Sbjct: 859  HSLALKADGTVWGWGENIYGQLGDGTTTQRV--APTQAQGL--------------TVVLS 902

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              +G +H LA    G ++ WG + HGQLG+ +    ++  P  V  L+   VV   A + 
Sbjct: 903  MASGTYHGLARKADGTLWAWGYNAHGQLGIGT--TTTRLAPTLVPSLS--GVVSLSATHQ 958

Query: 126  HCLVLTSSGVV-TCTHKENGCGSD--------PSQGVQSNLVQDSHTTIT---SLNSPGE 173
            H L L   G V    +  NG   D        P+Q    + V+          ++ + G 
Sbjct: 959  HSLALKPDGTVWAWGYNSNGQLGDGTTTTRHVPTQAPSLSSVKAVSAGFEYSLAVKADGT 1018

Query: 174  LYTWGNNEYGQMGINNSNTTVTKPQRVESL 203
            +++WG N+ GQ+G   +    T P +V  L
Sbjct: 1019 VWSWGINDRGQLGSGTATPRAT-PTQVAGL 1047



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 34/202 (16%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKK-SQSIPKRVKGLASVSVVQACAGYSH 60
            +G +H LA    G ++ WG + HGQLG+ +   + + ++   + G+ S+S          
Sbjct: 905  SGTYHGLARKADGTLWAWGYNAHGQLGIGTTTTRLAPTLVPSLSGVVSLSATHQ------ 958

Query: 61   CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                       HSLAL   G V+ WG +++GQLG       ++ +P +   L+SV  V  
Sbjct: 959  -----------HSLALKPDGTVWAWGYNSNGQLG--DGTTTTRHVPTQAPSLSSVKAV-- 1003

Query: 121  CAGYSHCLVLTSSGVVTC----THKENGCG-----SDPSQGVQSNLVQDSHTTITS---L 168
             AG+ + L + + G V         + G G     + P+Q    N V            +
Sbjct: 1004 SAGFEYSLAVKADGTVWSWGINDRGQLGSGTATPRATPTQVAGLNSVTLLLAARAHALVV 1063

Query: 169  NSPGELYTWGNNEYGQMGINNS 190
            ++ G +  +G+NE GQ+G  ++
Sbjct: 1064 SADGTMRGFGDNEAGQLGAGDT 1085


>gi|255074379|ref|XP_002500864.1| predicted protein [Micromonas sp. RCC299]
 gi|226516127|gb|ACO62122.1| predicted protein [Micromonas sp. RCC299]
          Length = 265

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 69/240 (28%), Positives = 103/240 (42%), Gaps = 58/240 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+  G VF WG +  GQLGL   D     +P    G   V +V   AG  H +
Sbjct: 40  GERHSLALSAKGTVFAWGDNHTGQLGLGGEDPLPMDVPTTSLG-RDVVIVGVAAGARHSV 98

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           ++++T            G+VFT G   +GQLG E  D +    P+RV+ LA ++VV   A
Sbjct: 99  MVSAT------------GDVFTVGWGLYGQLGHE--DAEDLFAPRRVEHLAGITVVSVAA 144

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H   +T  G                                       LY WG+N  
Sbjct: 145 GSAHTACVTRDGA--------------------------------------LYAWGSNRK 166

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS---RLYAFGIGSAVQL 239
           G++G    + T  +    +   +L +A +ACG++H+  L++  S    L+ FG  +  QL
Sbjct: 167 GELGTATGDVTKARESN-DGAGSLAVA-VACGSSHTVALARLESGEAGLFGFGWNNMGQL 224


>gi|301117542|ref|XP_002906499.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262107848|gb|EEY65900.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 1711

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 30/250 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H +AL D G  ++WG +  GQLG E+   K   +PK ++ L    +  A   Y H  
Sbjct: 417 GCEHMIALTDSGLAYSWGYNDRGQLGHENLTTKVH-VPKLIESLKDKKLRYASVSYHHSA 475

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V+T            D GE++ +G +  GQLGL+    + QS P+ VKG     +     
Sbjct: 476 VIT------------DSGELYAFGMNDCGQLGLDHT--QHQSTPQLVKGFEGTEISMVAC 521

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQS---------NLVQDSHTTITSLN 169
           G  H ++ T++G +    K +    G G +    V S         + V   +     + 
Sbjct: 522 GLYHTIICTATGGLFACGKNDYGQLGLGHNRQIKVASLVSLPNEMVSYVASGYYHSVVVT 581

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           + G  +++G N+YGQ+GI N       P  V    N  +    CG  H+ +LS+   +++
Sbjct: 582 NSGRTFSFGRNDYGQLGIGN-KVHQNVPNVVALSANTRMVRATCGCYHTVLLSEQ-GQVF 639

Query: 230 AFGIGSAVQL 239
            FG  +  QL
Sbjct: 640 VFGRNNKGQL 649



 Score = 73.6 bits (179), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 117/258 (45%), Gaps = 41/258 (15%)

Query: 10  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTG 69
           L + G V T G +  GQ G    D++   + + V+ L S  V            + ++ G
Sbjct: 369 LTNDGVVLTCGLNKSGQCGQGHFDERVMML-RPVQALRSQRVK----------FIAASNG 417

Query: 70  LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 129
             H +AL D G  ++WG +  GQLG E+   K   +PK ++ L    +  A   Y H  V
Sbjct: 418 CEHMIALTDSGLAYSWGYNDRGQLGHENLTTKVH-VPKLIESLKDKKLRYASVSYHHSAV 476

Query: 130 LTSSGVVTCTHKENGCG----------SDPS-----QGVQSNLVQDS--HTTITSLNSPG 172
           +T SG +      N CG          S P      +G + ++V     HT I +  + G
Sbjct: 477 ITDSGELYA-FGMNDCGQLGLDHTQHQSTPQLVKGFEGTEISMVACGLYHTIICT--ATG 533

Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLP---IALIACGANHSFVLSKSVSRLY 229
            L+  G N+YGQ+G+ ++        +V SLV+LP   ++ +A G  HS V++ S  R +
Sbjct: 534 GLFACGKNDYGQLGLGHNRQI-----KVASLVSLPNEMVSYVASGYYHSVVVTNS-GRTF 587

Query: 230 AFGIGSAVQLDSPKSVHK 247
           +FG     QL     VH+
Sbjct: 588 SFGRNDYGQLGIGNKVHQ 605



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 21/193 (10%)

Query: 80  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV-TC 138
           GE+++ G +++G+LG     ++ Q     + G   +   Q  +G     VLT+ GVV TC
Sbjct: 321 GELYSCGQNSYGELGTGDDIERHQLTSISLCGWDDIR--QVASGNETLAVLTNDGVVLTC 378

Query: 139 THKENG-CGSD----------PSQGVQSNLVQ-----DSHTTITSLNSPGELYTWGNNEY 182
              ++G CG            P Q ++S  V+     +    + +L   G  Y+WG N+ 
Sbjct: 379 GLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDSGLAYSWGYNDR 438

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G  N  T V  P+ +ESL +  +   +   +HS V++ S   LYAFG+    QL   
Sbjct: 439 GQLGHENLTTKVHVPKLIESLKDKKLRYASVSYHHSAVITDS-GELYAFGMNDCGQLGLD 497

Query: 243 KSVHK-TPQLIHG 254
            + H+ TPQL+ G
Sbjct: 498 HTQHQSTPQLVKG 510



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 31/199 (15%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS  + D GE++ +G +  GQLGL+    + QS P+ VKG     +     G  H ++ T
Sbjct: 473 HSAVITDSGELYAFGMNDCGQLGLDHT--QHQSTPQLVKGFEGTEISMVACGLYHTIICT 530

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           +T GL            F  G + +GQLGL       Q     +  L +  V    +GY 
Sbjct: 531 ATGGL------------FACGKNDYGQLGL---GHNRQIKVASLVSLPNEMVSYVASGYY 575

Query: 126 HCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTITS----------LNSP 171
           H +V+T+SG      + +    G G+   Q V + +   ++T +            L+  
Sbjct: 576 HSVVVTNSGRTFSFGRNDYGQLGIGNKVHQNVPNVVALSANTRMVRATCGCYHTVLLSEQ 635

Query: 172 GELYTWGNNEYGQMGINNS 190
           G+++ +G N  GQ+G   S
Sbjct: 636 GQVFVFGRNNKGQLGNRGS 654



 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 14/109 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G +HS+ + + G  F++G + +GQLG+   +K  Q++P  V   A+  +V+A       
Sbjct: 572 SGYYHSVVVTNSGRTFSFGRNDYGQLGI--GNKVHQNVPNVVALSANTRMVRA------- 622

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK 110
                T G +H++ L++ G+VF +G +  GQLG   +      +P +V+
Sbjct: 623 -----TCGCYHTVLLSEQGQVFVFGRNNKGQLGNRGSADALLPVPLKVR 666


>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
            vitripennis]
          Length = 4752

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 106/234 (45%), Gaps = 33/234 (14%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A+   GE++TWG   +G+LG    D  +   PK V  L    V+Q   G     
Sbjct: 3069 GSGHSAAIASNGELYTWGLGEYGRLG--HGDTTTHLKPKLVDALVGQRVIQVACGSRDA- 3125

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                      ++AL + G V++WG    G+LG   +D     +P  V  L  + VVQ   
Sbjct: 3126 ---------QTMALTEDGSVYSWGDGDFGKLGRGGSDGCYSPLP--VDRLNGLGVVQVEC 3174

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
            G    L LT  G V    K +    G G+D     P+  +G++   V   H  + +L+  
Sbjct: 3175 GAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRRPTLVEGLRGKKV--VHVAVGALHCL 3232

Query: 170  ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                 G++Y WG+N++GQ G N S     KP  V +L +  +  +ACG++HS  
Sbjct: 3233 AVTDAGQVYAWGDNDHGQQG-NGSTMVNRKPSLVHNLEDAKVNRVACGSSHSIA 3285



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 29/236 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS A++  G ++TWG   +G+LG    D   Q  P  V  L    V+    G     
Sbjct: 4041 GGHHSAAISSAGWLYTWGKGRYGRLG--HGDSDDQLKPTVVTALQGYKVIDVACG----- 4093

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 +G   +L + D   V++WG   +G+LG   +D     +P +++ LA + VV+   
Sbjct: 4094 -----SGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSD--GCKVPMKIESLAGLGVVKVEC 4146

Query: 123  GYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSL 168
            G    + LT SG V    K +    G G+D            QG +   +        + 
Sbjct: 4147 GSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVSALQGKKIVSIATGSLHCVAC 4206

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
            +  GE+YTWG+N+ GQ+G + +      P+ V +L    I  +ACG+ H+   S +
Sbjct: 4207 SDKGEVYTWGDNDEGQLG-DGTTHAQQSPRLVHALQGKNITRVACGSAHTLAWSTT 4261



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 116/269 (43%), Gaps = 35/269 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+LAL   G+VF+WG    G+LG    ++ S   P+ ++ L S  +     G    
Sbjct: 3016 SGGKHALALTQDGKVFSWGEGEDGKLG--HGNRVSLDKPRLIEALKSKRIRDIACGSG-- 3071

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      HS A+   GE++TWG   +G+LG    D  +   PK V  L    V+Q  
Sbjct: 3072 ----------HSAAIASNGELYTWGLGEYGRLG--HGDTTTHLKPKLVDALVGQRVIQVA 3119

Query: 122  AGY--SHCLVLTSSGVVTC----------THKENGCGS----DPSQGVQSNLVQDSHTTI 165
             G   +  + LT  G V                +GC S    D   G+    V+      
Sbjct: 3120 CGSRDAQTMALTEDGSVYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFS 3179

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   GE++TWG  +Y ++G  N +  V +P  VE L    +  +A GA H   ++ + 
Sbjct: 3180 LALTKYGEVWTWGKGDYFRLGHGNDH-HVRRPTLVEGLRGKKVVHVAVGALHCLAVTDA- 3237

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIH 253
             ++YA+G      Q +    V++ P L+H
Sbjct: 3238 GQVYAWGDNDHGQQGNGSTMVNRKPSLVH 3266



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 56/234 (23%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSH 60
            +G  H LAL+  G V++WG    G+LG    ++ +   PK ++ L    +V  AC G+  
Sbjct: 3988 SGGKHCLALSSEGHVYSWGEGDDGKLG--HGNRITYDRPKLIEALLGTEIVDIACGGH-- 4043

Query: 61   CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                       HS A++  G ++TWG   +G+LG    D   Q  P         +VV A
Sbjct: 4044 -----------HSAAISSAGWLYTWGKGRYGRLG--HGDSDDQLKP---------TVVTA 4081

Query: 121  CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
              GY    V               CGS  +Q +              +     +++WG+ 
Sbjct: 4082 LQGYKVIDV--------------ACGSGDAQTL-------------CVTDDDNVWSWGDG 4114

Query: 181  EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
            +YG++G   S+     P ++ESL  L +  + CG+  S  L++S   +Y +G G
Sbjct: 4115 DYGKLGRGGSDGCKV-PMKIESLAGLGVVKVECGSQFSVALTRS-GAVYTWGKG 4166



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 56/223 (25%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+++  G  T+G+LGL   D  +   PK +  L S  +++  A +S         G  H+
Sbjct: 2974 GKLYACGEGTNGRLGL--GDNNNVGEPKPIPFL-SQYIIKKVAVHS---------GGKHA 3021

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL   G+VF+WG    G+LG    ++ S   P+ ++ L S  +                
Sbjct: 3022 LALTQDGKVFSWGEGEDGKLG--HGNRVSLDKPRLIEALKSKRI---------------- 3063

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                   ++  CGS  S  + SN               GELYTWG  EYG++G +   TT
Sbjct: 3064 -------RDIACGSGHSAAIASN---------------GELYTWGLGEYGRLG-HGDTTT 3100

Query: 194  VTKPQRVESLVNLPIALIACGAN--HSFVLSKSVSRLYAFGIG 234
              KP+ V++LV   +  +ACG+    +  L++  S +Y++G G
Sbjct: 3101 HLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGS-VYSWGDG 3142



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 114/251 (45%), Gaps = 34/251 (13%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL   G V++WG    G+LG    D  S   P+ ++ L+  +V     G ++   ++
Sbjct: 512 HYLALTTKGIVYSWGNGDGGRLG--HGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAIS 569

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
           ST            GE+ TWG  ++G+LG    D    SIP  V  L   +V   AC +G
Sbjct: 570 ST------------GELLTWGRGSYGRLGHGICD--DISIPTVVTALNGHTVTHVACGSG 615

Query: 124 YSHCLVLTSSGVVTC-----THKENGCGSDPSQ--GVQSNLVQDSHTTI-------TSLN 169
            S  L +T+SG+V         K    GSD S+   +   L+  +   +        +L 
Sbjct: 616 DSQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALT 675

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           + GE+YTWG  ++ ++G  N    V  P+ VE L N  +  ++ G  H   +++    +Y
Sbjct: 676 AHGEVYTWGKGDHYRLGHGNEE-HVRFPKLVEGLRNKKVRDLSVGNLHILAITED-QLVY 733

Query: 230 AFGIGSAVQLD 240
            +G   A Q+D
Sbjct: 734 GWGRNDACQID 744



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 22/179 (12%)

Query: 73   SLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
            +L+ +  G ++ WG +  GQLG LE A  K   +P   + L+++  +Q   G      +T
Sbjct: 3887 TLSWDGSGAIYGWGHNHRGQLGGLEGAKVK---LPLPCESLSALRPIQLAGGEQTLFAVT 3943

Query: 132  SSGVVTCTH----KENGCGSDPSQGVQSNLVQDSHTTIT------------SLNSPGELY 175
            + G V  T        G G   S  V + L    H  I             +L+S G +Y
Sbjct: 3944 ADGKVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVY 4003

Query: 176  TWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
            +WG  + G++G  N   T  +P+ +E+L+   I  IACG +HS  +S S   LY +G G
Sbjct: 4004 SWGEGDDGKLGHGN-RITYDRPKLIEALLGTEIVDIACGGHHSAAIS-SAGWLYTWGKG 4060



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 100/236 (42%), Gaps = 43/236 (18%)

Query: 7    SLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            +L+ +  G ++ WG +  GQLG LE A  K   +P   + L+++  +Q   G      +T
Sbjct: 3887 TLSWDGSGAIYGWGHNHRGQLGGLEGAKVK---LPLPCESLSALRPIQLAGGEQTLFAVT 3943

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV--VQACAG 123
            +             G+V+  G    G+LG    D  S  +P  ++ +  V +  V   +G
Sbjct: 3944 AD------------GKVYATGYGALGRLGTGGVD--SVMVPTLLESIQHVFIKKVAVNSG 3989

Query: 124  YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSL--------------- 168
              HCL L+S G V       G G D   G  + +  D    I +L               
Sbjct: 3990 GKHCLALSSEGHVYSW----GEGDDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHS 4045

Query: 169  ---NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
               +S G LYTWG   YG++G  +S+  + KP  V +L    +  +ACG+  +  L
Sbjct: 4046 AAISSAGWLYTWGKGRYGRLGHGDSDDQL-KPTVVTALQGYKVIDVACGSGDAQTL 4100



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 18/153 (11%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA-CAGYSH 60
           +G   +L + + G VF+WG   +G+LG   +D     +PK V  L   +VV+  C G   
Sbjct: 614 SGDSQTLCVTNSGIVFSWGDGDYGKLGRGGSD--GSKLPKIVDKLLDQNVVKVFCGGQ-- 669

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                       S AL   GEV+TWG   H +LG    +++    PK V+GL +  V   
Sbjct: 670 -----------FSAALTAHGEVYTWGKGDHYRLG--HGNEEHVRFPKLVEGLRNKKVRDL 716

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGV 153
             G  H L +T   +V    + + C  DPS G 
Sbjct: 717 SVGNLHILAITEDQLVYGWGRNDACQIDPSLGA 749



 Score = 48.5 bits (114), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 17/160 (10%)

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
           EV  WG    G          S S+P     +A + V Q C      L+L+ SG V   +
Sbjct: 434 EVLAWGNVHFG----------SGSMPFYCDAIAEIGVKQLCCTERALLILSLSGKVYMMY 483

Query: 141 KENGCGSDPS-QGVQSNLVQ-DSHTT---ITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
             +      S  G   ++VQ  SH       +L + G +Y+WGN + G++G  +S  +  
Sbjct: 484 YGSETQYPQSVYGFADDVVQIASHPDGKHYLALTTKGIVYSWGNGDGGRLGHGDS-FSCD 542

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
           +PQ +E L +  +  IACG+ +S  +S S   L  +G GS
Sbjct: 543 EPQVIEVLSDRTVTYIACGSTYSAAIS-STGELLTWGRGS 581



 Score = 47.0 bits (110), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 3/73 (4%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            TG  H +A +D GEV+TWG +  GQLG       +Q  P+ V  L   ++ +   G +H 
Sbjct: 4198 TGSLHCVACSDKGEVYTWGDNDEGQLG--DGTTHAQQSPRLVHALQGKNITRVACGSAHT 4255

Query: 62   LVLTSTTGLWHSL 74
            L   STT   HSL
Sbjct: 4256 LAW-STTKATHSL 4267


>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
          Length = 4502

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 118/270 (43%), Gaps = 35/270 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+LAL   G VF+WG    G+LG    D  S   P+ ++ L    V    AG +H 
Sbjct: 2792 SGGRHALALTADGRVFSWGEGDDGKLG--HGDVTSLDTPRCIEALNGFRVRDVAAGSNHS 2849

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              +TS+            GE++TWG   +G+LG    D  +Q  PKRV+ L    VVQ  
Sbjct: 2850 AAVTSS------------GELYTWGLGEYGRLG--HGDNLTQLTPKRVESLVGQRVVQVS 2895

Query: 122  AGY--SHCLVLTSSGVVTC----------THKENGCGS----DPSQGVQSNLVQDSHTTI 165
             G   +  L L   G+V                 GC S    D   G+    V+      
Sbjct: 2896 CGSRDAQTLALVEGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFS 2955

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G +YTWG  +Y ++G + S+  V  P  VE L    +  ++ GA H   ++ + 
Sbjct: 2956 VALTCNGHVYTWGKGDYFRLG-HGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTDA- 3013

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
             +++A+G      Q +   +V++ P L+ G
Sbjct: 3014 GQVFAWGDNDHGQQGNGSITVNRRPTLVQG 3043



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 112/236 (47%), Gaps = 31/236 (13%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AGYSH 60
            G  HS A+   GE++TWG   +G+LG    D   Q  PK V+ L    V+  AC +G + 
Sbjct: 3761 GGAHSAAITALGELYTWGKGRYGRLG--HGDSDDQLKPKLVEALLGYRVMDVACGSGDAQ 3818

Query: 61   CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
               +T   G          G V++WG   +G+LG   +D     IP +++ L+ + +++ 
Sbjct: 3819 TCAITDEEG----------GTVWSWGDGDYGKLGRGGSD--GCKIPTKIESLSGLGIIKV 3866

Query: 121  CAGYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTITSLNS------ 170
              G    + L+++G V    K +    G G D        ++      + S+++      
Sbjct: 3867 ECGSQFSVALSNNGSVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQGKKVISISTGALHCV 3926

Query: 171  ----PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
                 GE+YTWG+N+ GQ+G + + T + KP+ V +L N  I  ++CG+ H+   S
Sbjct: 3927 VCTDQGEVYTWGDNDEGQLG-DGTTTGIQKPRLVAALQNKKINRVSCGSAHTVAWS 3981



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 29/227 (12%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS A+   GE++TWG   +G+LG    D  +Q  PKRV+ L    VVQ   G        
Sbjct: 2848 HSAAVTSSGELYTWGLGEYGRLG--HGDNLTQLTPKRVESLVGQRVVQVSCGSRDA---- 2901

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                   +LAL + G V++WG    G+LG   ++  S   P  V  L+ + V     G  
Sbjct: 2902 ------QTLALVEGGLVYSWGDGDFGKLGRGGSEGCSS--PCLVDKLSGLGVCHVECGAQ 2953

Query: 126  HCLVLTSSGVVTCTHKEN----GCGSD-----PS-----QGVQSNLVQDSHTTITSLNSP 171
              + LT +G V    K +    G GSD     P+     +G +   V        ++   
Sbjct: 2954 FSVALTCNGHVYTWGKGDYFRLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTDA 3013

Query: 172  GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
            G+++ WG+N++GQ G N S T   +P  V+ +  + I  +ACG++HS
Sbjct: 3014 GQVFAWGDNDHGQQG-NGSITVNRRPTLVQGIDGIKITRVACGSSHS 3059



 Score = 77.4 bits (189), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 99/234 (42%), Gaps = 54/234 (23%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSH 60
            +G  H LAL+  GEV++WG    G+LG    +K     P+ ++ L    VV  AC G   
Sbjct: 3708 SGGKHCLALSSEGEVYSWGEGEDGKLG--HGNKLPCDRPRIIESLRGKDVVDVACGGA-- 3763

Query: 61   CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                       HS A+   GE++TWG   +G+LG    D   Q  PK V+ L    V+  
Sbjct: 3764 -----------HSAAITALGELYTWGKGRYGRLG--HGDSDDQLKPKLVEALLGYRVMDV 3810

Query: 121  CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
                                    CGS            D+ T   +    G +++WG+ 
Sbjct: 3811 -----------------------ACGSG-----------DAQTCAITDEEGGTVWSWGDG 3836

Query: 181  EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
            +YG++G   S+     P ++ESL  L I  + CG+  S  LS + S +Y +G G
Sbjct: 3837 DYGKLGRGGSDGCKI-PTKIESLSGLGIIKVECGSQFSVALSNNGS-VYTWGKG 3888



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 96/222 (43%), Gaps = 54/222 (24%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+ +  G  ++G+LGL     ++ + P ++  L S  VV+  A +S         G  H+
Sbjct: 2750 GKAYACGEGSNGRLGL--GHSRNVNSPHQITAL-SQHVVRKVAVHS---------GGRHA 2797

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL   G VF+WG    G+LG    D  S   P+ ++ L    V    AG +H   +TSS
Sbjct: 2798 LALTADGRVFSWGEGDDGKLG--HGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSS 2855

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            G                                      ELYTWG  EYG++G +  N T
Sbjct: 2856 G--------------------------------------ELYTWGLGEYGRLG-HGDNLT 2876

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL-YAFGIG 234
               P+RVESLV   +  ++CG+  +  L+     L Y++G G
Sbjct: 2877 QLTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDG 2918



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 43/226 (19%)

Query: 14   GEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWH 72
            G+++ WG +  GQLG +E A  K   +P   + L+++  +Q   G      +TS      
Sbjct: 3614 GQIYGWGHNHRGQLGGVEGAKVK---VPTVCEALSALRPIQLAGGEQTLFAITSD----- 3665

Query: 73   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV--VQACAGYSHCLVL 130
                   G V+  G    G+LG+  A+  S ++P  ++ L  V V  V   +G  HCL L
Sbjct: 3666 -------GRVYATGYGAGGRLGIGGAE--SVTVPSLLESLQHVFVKKVAVNSGGKHCLAL 3716

Query: 131  TSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSP------------------G 172
            +S G V       G G D   G  + L  D    I SL                     G
Sbjct: 3717 SSEGEVYSW----GEGEDGKLGHGNKLPCDRPRIIESLRGKDVVDVACGGAHSAAITALG 3772

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
            ELYTWG   YG++G  +S+  + KP+ VE+L+   +  +ACG+  +
Sbjct: 3773 ELYTWGKGRYGRLGHGDSDDQL-KPKLVEALLGYRVMDVACGSGDA 3817



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 16/130 (12%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   S+AL   G V+TWG   + +LG   +D+  +  P  V+GL    V+    G  HCL
Sbjct: 2951 GAQFSVALTCNGHVYTWGKGDYFRLG-HGSDQHVR-WPTLVEGLRGKKVIGVSVGALHCL 3008

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
             +T            D G+VF WG + HGQ G  S     +  P  V+G+  + + +   
Sbjct: 3009 AVT------------DAGQVFAWGDNDHGQQGNGSITVNRR--PTLVQGIDGIKITRVAC 3054

Query: 123  GYSHCLVLTS 132
            G SH +  T+
Sbjct: 3055 GSSHSVAWTA 3064


>gi|55925524|ref|NP_001007319.1| ubiquitin-protein ligase E3A [Danio rerio]
 gi|55250378|gb|AAH85646.1| Ubiquitin protein ligase E3A [Danio rerio]
          Length = 857

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 76/151 (50%), Gaps = 18/151 (11%)

Query: 942  PFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTI 1001
            PFI +A  K   L  D RI+M      T  Y  +Q      LN YL ++V RD+I++D +
Sbjct: 463  PFILNAVTKNLGLYYDNRIRMYSERRITALYSLVQG---QQLNPYLRLKVRRDHIIDDAL 519

Query: 1002 REL---AQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDP 1058
              L   A     D KK L             V+F GE+  D GGV +EF  L+++EI +P
Sbjct: 520  VRLEMIAMENPADLKKQL------------YVEFEGEQGVDEGGVSKEFFQLVVEEIFNP 567

Query: 1059 KYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              GMF   E T+  WF+  +FE++  + LIG
Sbjct: 568  DIGMFTYDESTKLFWFNPSSFENEGQFTLIG 598



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 63/95 (66%), Gaps = 2/95 (2%)

Query: 721 GITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPIL 779
           G+  Y+E T+  WF+  +FE++    LIG + GLAIYN  I+++ FP+ +Y+K++ +   
Sbjct: 570 GMFTYDESTKLFWFNPSSFENEGQFTLIGIVLGLAIYNNCILDVHFPMVIYRKLMGKKGT 629

Query: 780 LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
            +DL D  P L +SL+D+++Y E ++E+   ITF+
Sbjct: 630 FRDLADSHPVLFQSLKDLMEY-EGNVEEDMMITFQ 663


>gi|222616116|gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
          Length = 425

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 116/269 (43%), Gaps = 37/269 (13%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS A+   G++F WG ++ GQLGL     K  S P++V  LA   V     G        
Sbjct: 136 HSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSE------ 189

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLG-------LESADKKSQSIPKRVKGLASVSVV 118
                 HS+A  + GEV +WG    G+LG       L  +   S+  P+ +K L  V + 
Sbjct: 190 ------HSIATTEEGEVLSWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIK 243

Query: 119 QACAGYSHCLVLTSSGV--VTCTHKENGCGSDPSQGVQSNLVQDS-----------HTTI 165
           +  AG  H   +   G   +     E G G    + ++  +V++            HT +
Sbjct: 244 RIAAGMLHSACIDEKGTLFIFGQKTEKGFGRSGDE-LRPTVVEEVPFSEEVACGGYHTCV 302

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +   G+LY+WG+NE G +G+  ++   +      SL   P++ ++CG  H+ V+S   
Sbjct: 303 --VTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVISG-- 358

Query: 226 SRLYAFGIGSAVQLDSPKSVHKTPQLIHG 254
             +Y +G G A      +      QL HG
Sbjct: 359 GDIYTWGWGGANGTFFEEGHSSGGQLGHG 387



 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 58/131 (44%), Gaps = 14/131 (10%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+L L + G VF  G +  GQLG+ S+   S   P  V G     VV+  AG  H   +T
Sbjct: 84  HTLFLTESGRVFAAGLNDFGQLGIGSSVTHSLE-PIEVSGFDE-KVVEVSAGNHHSCAVT 141

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           +             G++F WG ++ GQLGL     K  S P++V  LA   V     G  
Sbjct: 142 AD------------GKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSE 189

Query: 126 HCLVLTSSGVV 136
           H +  T  G V
Sbjct: 190 HSIATTEEGEV 200


>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 2305

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 105/240 (43%), Gaps = 63/240 (26%)

Query: 3   GLWHSLALNDCGEVFTWGGDTH-----GQLGLESADKKSQSIPKRVKGLASVSVVQACAG 57
           G ++S AL + G+V+ WG  +        LG  + D   Q +P++V+ L  + V+     
Sbjct: 585 GSYYSAALTENGDVYMWGRGSVKNPPIATLGNGTFD--DQLLPQKVESLQEIVVI----- 637

Query: 58  YSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV 117
                    + G +HS A+   GE+ TWG    GQLG    D  +Q IPK V+ + S  V
Sbjct: 638 ---------SIGFYHSAAVKSNGELLTWGCGEDGQLG--HGDVFNQPIPKVVQSITSHWV 686

Query: 118 VQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTW 177
            Q   G  H + LT +                                      G+++TW
Sbjct: 687 TQVQCGEKHTICLTKN--------------------------------------GKVFTW 708

Query: 178 GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
           G +EYGQ+G+ ++    T P  V SL    I  IACGA H+ VL+ +   +  FG G+A+
Sbjct: 709 GTSEYGQLGLGDTQKNCT-PMLVTSLDKYHIIQIACGATHNAVLTNN-REVLVFGNGAAM 766



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 97/255 (38%), Gaps = 82/255 (32%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++ L   G+VFTWG   +GQLGL   D +    P  V  L    ++Q   G +H  
Sbjct: 692 GEKHTICLTKNGKVFTWGTSEYGQLGL--GDTQKNCTPMLVTSLDKYHIIQIACGATHNA 749

Query: 63  VLTS------------------------------------TTGLWHSLALNDCGEVFTWG 86
           VLT+                                    + G + + AL +CG+V+TWG
Sbjct: 750 VLTNNREVLVFGNGAAMGSANIISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWG 809

Query: 87  GDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCG 146
                   L      S++ PK V+ L + S+ Q   G  H   LT S             
Sbjct: 810 SGQE----LGHGHGTSEAHPKLVETLRNQSIRQISCGGRHMAFLTDS------------- 852

Query: 147 SDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNL 206
                                    G++YT G + +GQ+G  ++     +P++++SL+  
Sbjct: 853 -------------------------GKIYTSGKDPFGQLG--HAAGDQNRPKKIDSLLKT 885

Query: 207 PIALIACGANHSFVL 221
               I+CG NH+  L
Sbjct: 886 TFMSISCGENHNAAL 900



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 26/208 (12%)

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           S+  +  +  L+    + TWG  ++ +LG +S +K SQ  P+R+       +     G  
Sbjct: 528 SSLSMRSATQLDTSRGLMTWGSGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSY 587

Query: 126 HCLVLTSSGVVTCTHKEN---------GCGSDPSQGVQSNLVQDSHTTITSL-------- 168
           +   LT +G V    + +         G G+   Q +   +       + S+        
Sbjct: 588 YSAALTENGDVYMWGRGSVKNPPIATLGNGTFDDQLLPQKVESLQEIVVISIGFYHSAAV 647

Query: 169 NSPGELYTWGNNEYGQMGINNS-NTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
            S GEL TWG  E GQ+G  +  N  +  P+ V+S+ +  +  + CG  H+  L+K+  +
Sbjct: 648 KSNGELLTWGCGEDGQLGHGDVFNQPI--PKVVQSITSHWVTQVQCGEKHTICLTKN-GK 704

Query: 228 LYAFGIGSAVQL---DSPKSVHKTPQLI 252
           ++ +G     QL   D+ K+   TP L+
Sbjct: 705 VFTWGTSEYGQLGLGDTQKNC--TPMLV 730


>gi|427794191|gb|JAA62547.1| Putative ubiquitin-protein ligase ubiquitin-protein ligase, partial
           [Rhipicephalus pulchellus]
          Length = 998

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 60/91 (65%)

Query: 727 ETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDL 786
           ET++ WF+  +FE      LIG + GLAIYN  I+++ FP+ +Y+K+L       DL+D 
Sbjct: 718 ETQTYWFNPTSFESDAQFKLIGIILGLAIYNNVILDVHFPMVVYRKLLGRRGTFHDLQDW 777

Query: 787 SPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
           +P+LAK LQ +LDY+  D+E+VF  +FR  Y
Sbjct: 778 NPSLAKGLQQLLDYKGDDMEEVFVQSFRITY 808



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 16/151 (10%)

Query: 941  YPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDT 1000
            + F+     K   L  D RI+M    ++ +  +          N YL + V RD++++D 
Sbjct: 603  HAFVLTPAVKALGLYYDNRIRM---YSERHLSVIQMLVGGAPANPYLRLNVRRDHLIDDA 659

Query: 1001 IRELAQYTTNDFKKPLKVNDTSPIYLAPQ--VKFRGEEAEDAGGVRREFLMLLLKEILDP 1058
            +  L                 SP  L  Q  V+F GE+  D GGV +EF  L+++EI +P
Sbjct: 660  LHRLELVAME-----------SPSSLKKQLVVEFEGEQGIDEGGVSKEFFQLVVEEIFNP 708

Query: 1059 KYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
               MF    ET++ WF+  +FE    + LIG
Sbjct: 709  DIAMFTLNSETQTYWFNPTSFESDAQFKLIG 739


>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1100

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 104/228 (45%), Gaps = 19/228 (8%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WH+  +   G++FT+G  T G LG    D+KS SIP+ V+ L  +  V+A  G  H  
Sbjct: 419 GPWHTAVVTSSGQLFTFGDGTFGVLG--HGDRKSVSIPREVESLKGLRTVRAACGVWHTA 476

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +        S +    G++FTWG    G+LG    DK+++ +P  V  L   +  Q   
Sbjct: 477 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG--HGDKEAKLVPTCVAALVEPNFCQVAC 534

Query: 123 GYSHCLVLTSSGVVTCTHKE--NGCGSDPSQGVQSNLVQDSHTT------------ITSL 168
           G+S  + LT+SG V           G+  + G   N V+   +             +  L
Sbjct: 535 GHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGRLSKSFVEEIACGAYHVAVL 594

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN 216
            S  E+YTWG    G++G  +++     P  VE+L +  +  IACG N
Sbjct: 595 TSKTEVYTWGKGANGRLGHGDTDDR-NFPSLVEALKDKQVKSIACGTN 641



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 118/265 (44%), Gaps = 45/265 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYSHC 61
           G +H+ A+   G+++TWG  T+    L   ++ S  +PKRV G L  + V          
Sbjct: 364 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS--------- 414

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              + + G WH+  +   G++FT+G  T G LG    D+KS SIP+ V+ L  +  V+A 
Sbjct: 415 ---SISCGPWHTAVVTSSGQLFTFGDGTFGVLG--HGDRKSVSIPREVESLKGLRTVRAA 469

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCG-----SDPSQG-------------------VQSNL 157
            G  H   +    V   +      G      D  +G                   V+ N 
Sbjct: 470 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 529

Query: 158 VQDS--HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLP-IALIACG 214
            Q +  H+   +L + G +YT G+  YGQ+G  N       P RVE  ++   +  IACG
Sbjct: 530 CQVACGHSLTVALTTSGHVYTMGSPVYGQLG--NPQADGKLPNRVEGRLSKSFVEEIACG 587

Query: 215 ANHSFVLSKSVSRLYAFGIGSAVQL 239
           A H  VL+ S + +Y +G G+  +L
Sbjct: 588 AYHVAVLT-SKTEVYTWGKGANGRL 611



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 62/140 (44%), Gaps = 29/140 (20%)

Query: 6   HSL--ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ--ACAGYSHC 61
           HSL  AL   G V+T G   +GQLG   AD K   +P RV+G  S S V+  AC  Y H 
Sbjct: 536 HSLTVALTTSGHVYTMGSPVYGQLGNPQADGK---LPNRVEGRLSKSFVEEIACGAY-HV 591

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
            VLTS T            EV+TWG   +G+LG    D   ++ P  V+ L    V    
Sbjct: 592 AVLTSKT------------EVYTWGKGANGRLG--HGDTDDRNFPSLVEALKDKQVKSIA 637

Query: 122 AGYSHCLVLTSSGVVTCTHK 141
            G +    +       C HK
Sbjct: 638 CGTNFTAAI-------CLHK 650



 Score = 44.3 bits (103), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 5/87 (5%)

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           GE+++WG    G++G +  ++ V  P+ ++SL N+ I L+ACG  H+  ++ S   LY +
Sbjct: 323 GEVFSWGEESGGRLG-HGVDSDVLHPKLIDSLSNINIELVACGEYHTCAVTLS-GDLYTW 380

Query: 232 GIGS---AVQLDSPKSVHKTPQLIHGP 255
           G G+    +     +  H  P+ ++GP
Sbjct: 381 GDGTYNFGLLGHGNEVSHWVPKRVNGP 407



 Score = 43.1 bits (100), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 91/234 (38%), Gaps = 67/234 (28%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQS--------IPKRVKGLASVSVVQACAGYSHCLVLT 65
           G+VF WG  T   +    A +            +PK ++    + V     G  H  ++T
Sbjct: 261 GDVFIWGEGTGDGVLGGGAHRAGSGFGVKLDSLLPKALESTVVLDVQNIACGGRHAALVT 320

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV-VQACAGY 124
                         GEVF+WG ++ G+LG    D      PK +  L+++++ + AC  Y
Sbjct: 321 KQ------------GEVFSWGEESGGRLG-HGVDSDVLH-PKLIDSLSNINIELVACGEY 366

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY-- 182
             C V  S                                       G+LYTWG+  Y  
Sbjct: 367 HTCAVTLS---------------------------------------GDLYTWGDGTYNF 387

Query: 183 GQMGINNSNTTVTKPQRVES-LVNLPIALIACGANHSFVLSKSVSRLYAFGIGS 235
           G +G  N  +    P+RV   L  + ++ I+CG  H+ V++ S  +L+ FG G+
Sbjct: 388 GLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSS-GQLFTFGDGT 439


>gi|432118046|gb|ELK37983.1| Ubiquitin-protein ligase E3A [Myotis davidii]
          Length = 1318

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 75/151 (49%), Gaps = 18/151 (11%)

Query: 942  PFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTI 1001
            PFI +A  K   L  D RI+M      T  Y  +Q      LN YL ++V RD+I++D +
Sbjct: 924  PFILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQG---QQLNPYLRLKVRRDHIIDDAL 980

Query: 1002 REL---AQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDP 1058
              L   A     D KK L             V+F GE+  D GGV +EF  L+++EI +P
Sbjct: 981  VRLEMIAMENPADLKKQL------------YVEFEGEQGVDEGGVSKEFFQLVVEEIFNP 1028

Query: 1059 KYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              GMF   E T+  WF+  +FE +  + LIG
Sbjct: 1029 DIGMFTYDENTKLFWFNPSSFETEGQFTLIG 1059



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 61/95 (64%), Gaps = 2/95 (2%)

Query: 721  GITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPIL 779
            G+  Y+E T+  WF+  +FE +    LIG + GLAIYN  I+++ FP+ +Y+K++ +   
Sbjct: 1031 GMFTYDENTKLFWFNPSSFETEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGT 1090

Query: 780  LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
             +DL D  P L +SL+D+L+Y E  +ED   ITF+
Sbjct: 1091 FRDLGDSHPVLFQSLKDLLEY-EGSVEDDMMITFQ 1124


>gi|241651044|ref|XP_002411264.1| RCC1 and BTB domain-containing protein, putative [Ixodes
           scapularis]
 gi|215503894|gb|EEC13388.1| RCC1 and BTB domain-containing protein, putative [Ixodes
           scapularis]
          Length = 533

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 102/240 (42%), Gaps = 57/240 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL   GEV+ WG +  GQ+G  S    +Q  P++V          +  G   C+
Sbjct: 134 GSHHSLALTCAGEVYAWGQNNCGQVG--SGSTTNQPTPRKVT---------SGIGGRRCI 182

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +    G   S+A+ + GEVF WG + +GQLGL   +  +Q+ P RV  L  V VV    
Sbjct: 183 GIA--CGQTSSMAVMENGEVFGWGYNGNGQLGL--GNNVNQTSPCRVTNLQGVVVV---C 235

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H + L+  GV                                      LYTWG N Y
Sbjct: 236 GYAHTMALSDEGV--------------------------------------LYTWGANSY 257

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G  N    V+ P R+ + +   + + A   NH    +   S++Y +G      + SP
Sbjct: 258 GQLGTGNKANQVS-PFRMPTEIGRVVEIAASHYNHISAAATQTSKVYMWGQCRGQSVTSP 316



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 4/103 (3%)

Query: 151 QGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL 210
           +G+Q  L   S   + ++   G+L +WG+N Y Q+G NN NT    P  +   ++  +A 
Sbjct: 73  KGIQG-LAYGSGPHVLAVTQSGDLLSWGHNGYCQLG-NNCNTQGLVPSSIVVTMHHQVAH 130

Query: 211 IACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
           +ACG++HS  L+     +YA+G  +  Q+ S  + ++ TP+ +
Sbjct: 131 VACGSHHSLALT-CAGEVYAWGQNNCGQVGSGSTTNQPTPRKV 172


>gi|218779101|ref|YP_002430419.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760485|gb|ACL02951.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 671

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 126/271 (46%), Gaps = 78/271 (28%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           SL L   G V++WG +T+  LGL   D+  ++ P++V+ L+  + V   AG  H L LT 
Sbjct: 139 SLGLKTDGTVWSWGCNTYATLGL--GDRVDRNTPQKVEALS--NAVALAAGDDHTLALTR 194

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKS-QSIPKRVKGLASVSVVQACAGYS 125
                        G V++WG + +GQLGL S  + + +S PK+V+ +++V+ + A     
Sbjct: 195 D------------GSVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAISNVTAIAA----- 237

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                                            Q  HT   +L   G +++WG+N++GQ+
Sbjct: 238 ---------------------------------QTYHT--QALTRDGNVWSWGSNDFGQL 262

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL------ 239
           G+ + N     PQ+VE+L N  +  I  G NHS  +++   +++A+G  S  QL      
Sbjct: 263 GMGDQNDR-DAPQKVEALSN--VVAINAGGNHSLAVTRD-GQVWAWGENSEGQLGLGDLW 318

Query: 240 --DSPKSVHKTPQLIHGPWIASPVAMTAGED 268
             D+P+ V           +++ VA+ AG D
Sbjct: 319 DRDAPQKVEA---------LSNVVAINAGGD 340



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 104/210 (49%), Gaps = 35/210 (16%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKS-QSIPKRVKGLASVSVVQACAGYSHCLVL 64
           H+LAL   G V++WG + +GQLGL S  + + +S PK+V+ +++V+ + A          
Sbjct: 188 HTLALTRDGSVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAISNVTAIAAQ--------- 238

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
                 +H+ AL   G V++WG +  GQLG+   D+  +  P++V+ L++V  + A  G 
Sbjct: 239 -----TYHTQALTRDGNVWSWGSNDFGQLGM--GDQNDRDAPQKVEALSNVVAINA--GG 289

Query: 125 SHCLVLTSSGVVTC----THKENGCGS----DPSQGVQ--SNLVQ----DSHTTITSLNS 170
           +H L +T  G V      +  + G G     D  Q V+  SN+V       HT   +L  
Sbjct: 290 NHSLAVTRDGQVWAWGENSEGQLGLGDLWDRDAPQKVEALSNVVAINAGGDHTL--ALTR 347

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRV 200
            G ++ WG N  GQ+G     +   +P  V
Sbjct: 348 DGSVWAWGKNGRGQIGTGEGQSLYNEPVHV 377



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 20/132 (15%)

Query: 5   WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
           +H+ AL   G V++WG +  GQLG+   D+  +  P++V+ L++V  + A          
Sbjct: 240 YHTQALTRDGNVWSWGSNDFGQLGM--GDQNDRDAPQKVEALSNVVAINA---------- 287

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
               G  HSLA+   G+V+ WG ++ GQLGL   D   +  P++V+ L++V  +   AG 
Sbjct: 288 ----GGNHSLAVTRDGQVWAWGENSEGQLGL--GDLWDRDAPQKVEALSNVVAIN--AGG 339

Query: 125 SHCLVLTSSGVV 136
            H L LT  G V
Sbjct: 340 DHTLALTRDGSV 351



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 54/255 (21%)

Query: 8   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTST 67
           +A+   G ++TWGG+  G+LG+ +     Q++P ++  L++V              ++  
Sbjct: 1   MAVTQGGALWTWGGNDDGRLGIGA--TGDQNLPVQLSYLSNV--------------VSLA 44

Query: 68  TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV-------------KGLAS 114
            G  HSLA++  G V++WG ++ GQLG+ES    S   P                 G  +
Sbjct: 45  GGEKHSLAVSGDGSVWSWGSNSAGQLGVESLTPASVLAPVHALYSGDDFHLFYDTDGDGT 104

Query: 115 VSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDP--SQGVQSNLVQDSHTTITSLNSPG 172
             +   C    +    T+ G+  C +        P  + G Q +L          L + G
Sbjct: 105 GDICDDC---PYDPFKTAPGLSGCGNAV------PMLAAGTQFSL---------GLKTDG 146

Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
            +++WG N Y  +G+ +       PQ+VE+L N  +AL A G +H+  L++  S ++++G
Sbjct: 147 TVWSWGCNTYATLGLGDR-VDRNTPQKVEALSN-AVALAA-GDDHTLALTRDGS-VWSWG 202

Query: 233 IGSAVQLDSPKSVHK 247
                QL    S+H+
Sbjct: 203 WNYNGQL-GLGSIHE 216


>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1044

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 112/241 (46%), Gaps = 47/241 (19%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHC 61
           G WHS      G+++T+G  T G LG    D+++ + PK V+ L+    ++ AC      
Sbjct: 371 GSWHSALTTSSGKLYTFGDGTFGVLG--HGDRETLAYPKEVEALSGFKTIKVAC------ 422

Query: 62  LVLTSTTGLWHSLAL----NDCG------EVFTWGGDTHGQLGLESADKKSQSIPKRVKG 111
                  G+WHS A+    N  G      +++TWG     +LG    DK+ + +PK V+ 
Sbjct: 423 -------GIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLG--HGDKEPRLVPKCVQA 473

Query: 112 LASVSVVQACAGYSHCLVLTSSG-VVTCTHKENG-CGSDPSQGVQSNLVQD--------- 160
           L   +  Q   G++  + L +SG V T     NG  G+  S G Q  LVQD         
Sbjct: 474 LLEYNFHQLACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEE 533

Query: 161 -----SHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGA 215
                SH T+  L S  E+YTWG    G++G  +      KP  VE+L +  +  I+CG+
Sbjct: 534 ISCGASHVTV--LTSRSEVYTWGMGANGRLGHGDLKDR-KKPCLVEALKDRHVKSISCGS 590

Query: 216 N 216
           N
Sbjct: 591 N 591



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 129/294 (43%), Gaps = 61/294 (20%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+ A+   G++F WG  ++    L    + S  +PK+V G   +  +Q         
Sbjct: 316 GEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSG--PLEGLQ--------- 364

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           VL+   G WHS      G+++T+G  T G LG    D+++ + PK V+ L+    ++   
Sbjct: 365 VLSVACGSWHSALTTSSGKLYTFGDGTFGVLG--HGDRETLAYPKEVEALSGFKTIKVAC 422

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H     S+ +V  T++             +N++              +LYTWG+ + 
Sbjct: 423 GIWH-----SAAIVEVTNQ-----------TGANVMSK------------KLYTWGDGDK 454

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
            ++G  +    +  P+ V++L+      +ACG N +  L+ S  R++  G  S  QL +P
Sbjct: 455 NRLGHGDKEPRLV-PKCVQALLEYNFHQLACGHNMTVALATS-GRVFTMGSSSNGQLGNP 512

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKS 296
           KS  K P L+              +D L S     +V++I  G  H  V  ++S
Sbjct: 513 KSDGKQPCLV--------------QDRLASE----LVEEISCGASHVTVLTSRS 548



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 18/126 (14%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           ++AL   G VFT G  ++GQLG   +D K   + +    LAS  V +   G SH  VLTS
Sbjct: 489 TVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQ--DRLASELVEEISCGASHVTVLTS 546

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGY 124
            +            EV+TWG   +G+LG    D K +  P  V+ L    V  +   + +
Sbjct: 547 RS------------EVYTWGMGANGRLG--HGDLKDRKKPCLVEALKDRHVKSISCGSNF 592

Query: 125 SHCLVL 130
           + C+ +
Sbjct: 593 TTCICI 598



 Score = 41.2 bits (95), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 4/74 (5%)

Query: 162 HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
           H  +T+    GE++TWG    G++G + ++  +++P+ VESL    + LI+CG  H+  +
Sbjct: 267 HVALTTRQ--GEVFTWGEEFGGRLG-HGTDADISRPKLVESLSLTVVDLISCGEFHTCAV 323

Query: 222 SKSVSRLYAFGIGS 235
           + S   L+ +G GS
Sbjct: 324 TTS-GDLFNWGDGS 336


>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 124/262 (47%), Gaps = 33/262 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L +   G+V +WG + +GQLGL   + +   +P+++K    V V    AG  H     
Sbjct: 137 HCLTVTFNGQVHSWGRNQNGQLGL--GNNQDSLLPQKIKAFEGVCVKMIAAGAEH----- 189

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  + A+ + G+++ WG   +G LGL  +D+  +S+P++V  +    +V    G+ 
Sbjct: 190 -------TTAITEGGDLYGWGWGRYGNLGL--SDRDDRSVPEKVSSVEGEKMVLVACGWR 240

Query: 126 HCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNS----------P 171
           H + ++SSG +       + + G G      V   L       I+ ++            
Sbjct: 241 HSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAED 300

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G+LY WG N++GQ+G+ + N     P  V       I  +ACG  H+  L+++   ++++
Sbjct: 301 GKLYGWGWNKFGQVGVED-NVDHCSPVEVNFPDEQKIVQVACGWRHTLALTEN-KNIFSW 358

Query: 232 GIGSAVQLDSPKSVHK-TPQLI 252
           G G++ QL   + + + TP++I
Sbjct: 359 GRGASGQLGHGEIIDRNTPKMI 380



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 97/235 (41%), Gaps = 57/235 (24%)

Query: 6   HSLALNDCG-EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
           H++A +D   ++++WG    G+LG    +      P+ +  L  + + Q   G SHCL +
Sbjct: 84  HTIAYSDDEMQLYSWGWGDFGRLG--HGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTV 141

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
           T              G+V +WG + +GQLGL   + +   +P+++K    V V    AG 
Sbjct: 142 TFN------------GQVHSWGRNQNGQLGL--GNNQDSLLPQKIKAFEGVCVKMIAAGA 187

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
            H   +T  G                                      +LY WG   YG 
Sbjct: 188 EHTTAITEGG--------------------------------------DLYGWGWGRYGN 209

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           +G+++ +   + P++V S+    + L+ACG  HS  +S S   LY +G     QL
Sbjct: 210 LGLSDRDDR-SVPEKVSSVEGEKMVLVACGWRHSVSVSSS-GALYTYGWSKYGQL 262



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/229 (21%), Positives = 92/229 (40%), Gaps = 55/229 (24%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS AL     V +WG    GQLG    D + + +P  +       V     G  H +  +
Sbjct: 32  HSAALLSGQMVCSWGRGEDGQLG--HGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYS 89

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                      +D  ++++WG    G+LG    +      P+ +  L  + + Q   G S
Sbjct: 90  -----------DDEMQLYSWGWGDFGRLG--HGNSSDVFNPQPIVALQGMKIKQIACGDS 136

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL +T +G                                      ++++WG N+ GQ+
Sbjct: 137 HCLTVTFNG--------------------------------------QVHSWGRNQNGQL 158

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
           G+ N+  ++  PQ++++   + + +IA GA H+  +++    LY +G G
Sbjct: 159 GLGNNQDSLL-PQKIKAFEGVCVKMIAAGAEHTTAITEG-GDLYGWGWG 205


>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 370

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 125/262 (47%), Gaps = 33/262 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LA+   GEV +WG + +GQLGL   D +   +P++++    + +    AG  H     
Sbjct: 120 HCLAVTMEGEVQSWGRNQNGQLGL--GDTEDSLVPQKIQAFEGIRIKMVAAGAEH----- 172

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  + A+ + G+++ WG   +G LGL   D+  + +P+RV       +     G+ 
Sbjct: 173 -------TAAVTEDGDLYGWGWGRYGNLGL--GDRTDRLVPERVTSTGGEKMSMVACGWR 223

Query: 126 HCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTIT----------SLNSP 171
           H + ++ SG +       + + G G      +   L   S++ I+          +L S 
Sbjct: 224 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGFRHTMALTSD 283

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G+LY WG N++GQ+G+ N N     P +V    +  +  ++CG  H+  +++  + ++A+
Sbjct: 284 GKLYGWGWNKFGQVGVGN-NLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTER-NNVFAW 341

Query: 232 GIGSAVQLDSPKSVHKT-PQLI 252
           G G+  QL   +SV +  P++I
Sbjct: 342 GRGTNGQLGIGESVDRNFPKII 363



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 31/248 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+AL     V +WG    GQLG    D + +  P ++  L    +V    G  H  V  
Sbjct: 15  HSVALLSGDIVCSWGRGEDGQLG--HGDAEDRPSPTQLSALDGHQIVSVTCGADHT-VAY 71

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           S +G+          EV++WG    G+LG  ++      +P  +K L  + + Q   G S
Sbjct: 72  SQSGM----------EVYSWGWGDFGRLGHGNSSDLFTPLP--IKALHGIRIKQIACGDS 119

Query: 126 HCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSLNSP 171
           HCL +T  G V    +      G G              +G++  +V        ++   
Sbjct: 120 HCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED 179

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G+LY WG   YG +G+ +    +  P+RV S     ++++ACG  H+  +S S + LY +
Sbjct: 180 GDLYGWGWGRYGNLGLGDRTDRLV-PERVTSTGGEKMSMVACGWRHTISVSYSGA-LYTY 237

Query: 232 GIGSAVQL 239
           G     QL
Sbjct: 238 GWSKYGQL 245



 Score = 47.4 bits (111), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 18/112 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++AL   G+++ WG +  GQ+G+   +   Q  P +V+      VVQ   G+ H L
Sbjct: 273 GFRHTMALTSDGKLYGWGWNKFGQVGV--GNNLDQCSPVQVRFPDDQKVVQVSCGWRHTL 330

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKGLA 113
            +T                VF WG  T+GQLG+ ES D+   + PK ++ L+
Sbjct: 331 AVTERN------------NVFAWGRGTNGQLGIGESVDR---NFPKIIEALS 367


>gi|448089864|ref|XP_004196922.1| Piso0_004152 [Millerozyma farinosa CBS 7064]
 gi|448094217|ref|XP_004197953.1| Piso0_004152 [Millerozyma farinosa CBS 7064]
 gi|359378344|emb|CCE84603.1| Piso0_004152 [Millerozyma farinosa CBS 7064]
 gi|359379375|emb|CCE83572.1| Piso0_004152 [Millerozyma farinosa CBS 7064]
          Length = 924

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 18/154 (11%)

Query: 937  FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPH-TLNQYLEVEVSRDN 995
            F C +PF+     K ++LE + R QME    +     F+ + +    ++ Y  V+V R+ 
Sbjct: 522  FFCQFPFLVSLGGKISILEYEARRQMERKAEEA----FINSLDKRIAIDVYFRVKVRREF 577

Query: 996  IVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEI 1055
            IV+D++R +   T N  KK L+V            +F  E   DAGG+++E+ +LL + +
Sbjct: 578  IVQDSLRCIKLNTPN-LKKSLRV------------QFVNELGIDAGGLKKEWFLLLTRSL 624

Query: 1056 LDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              P+ GMF   E++  +WFS    E+  MYFL G
Sbjct: 625  FSPEAGMFVNVEDSNYLWFSISPAENNEMYFLFG 658



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 3/95 (3%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKD 785
           E++  +WFS    E+  M FL G + GLAIYN TI+N+ FP ALYK +L+ P+ L D + 
Sbjct: 636 EDSNYLWFSISPAENNEMYFLFGAILGLAIYNSTILNLKFPTALYKLLLNIPVGLDDYRQ 695

Query: 786 LSPTLAKSLQDILDYREPDLEDV---FGITFRNWY 817
           L P+ AK+L  + +Y    LED+   F I+F++ +
Sbjct: 696 LYPSTAKNLVTLKNYDSDVLEDLDLNFEISFKDVF 730


>gi|302507804|ref|XP_003015863.1| ubiquitin-protein ligase (Hul4), putative [Arthroderma benhamiae CBS
            112371]
 gi|291179431|gb|EFE35218.1| ubiquitin-protein ligase (Hul4), putative [Arthroderma benhamiae CBS
            112371]
          Length = 1084

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 108/228 (47%), Gaps = 32/228 (14%)

Query: 874  NETLTSSISAGG---RTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRP 930
            N T  S    GG   R  S++  P  +   K+  + FY   L    D+ +D+  W S   
Sbjct: 638  NGTGNSRKVEGGPSAREPSSVSEPNSNRLNKIPISYFYNARL-DYADLILDFEAWESR-- 694

Query: 931  NGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVE 990
              S +   C Y F+    AK  ++E D R QME    +  F   L       ++QYL ++
Sbjct: 695  --SGKFSFCQYSFLLSIWAKIQIMEHDARRQMEAKAREAFFDTILGR---RGVSQYLVLK 749

Query: 991  VSRDNIVEDTIRELAQY---TTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREF 1047
            V RD + ED+++ ++        D KK L++            +F GEE  DAGG+R+E+
Sbjct: 750  VRRDCLAEDSLQSVSSVIGSAEEDIKKGLRI------------EFAGEEGIDAGGLRKEW 797

Query: 1048 LMLLLKEILDPKY------GMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             +LL++E+ DP +      G+F   E+++  +F+   FE    +FL+G
Sbjct: 798  FLLLVREVFDPLHANDHLAGLFLYDEDSQYCYFNPYCFESSEQFFLVG 845



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 17/104 (16%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILD------EPIL 779
           E+++  +F+   FE     FL+G + GLAIYN TI+++  P   ++K+L        P L
Sbjct: 823 EDSQYCYFNPYCFESSEQFFLVGVVLGLAIYNSTILDIALPPFAFRKLLAYSPSNVTPTL 882

Query: 780 ----------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                     L DL +  P LAK L+ +L+Y + D+ + F   F
Sbjct: 883 SSPPQPFKPTLDDLAEFRPALAKGLRQLLEY-DGDVAETFCQDF 925


>gi|431913810|gb|ELK15239.1| RCC1 and BTB domain-containing protein 1 [Pteropus alecto]
          Length = 531

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 92/230 (40%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A      
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKKVVGIA------ 187

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V Q   
Sbjct: 188 -----CGQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVNQIVC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 241 GYAHTLALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N N  +  P  +       + + AC + H+         +Y +G
Sbjct: 263 GQLGTGNKNNLLN-PVHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 95/236 (40%), Gaps = 54/236 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L   + G V+ WG + + QLG  + ++              ++ +Q C       V+ 
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-------------GIAPIQVCTNLLIKQVVE 132

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V     +  V   A   
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKKVVGIA--- 187

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CG   S  V  N               GE+Y WG N  GQ+
Sbjct: 188 -------------------CGQTSSMAVLDN---------------GEVYGWGYNGNGQL 213

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           G+ N+   +T P RV +L ++ +  I CG  H+  L+     LYA+G  +  QL +
Sbjct: 214 GLGNNGNQLT-PVRVAALHSVCVNQIVCGYAHTLALTDE-GLLYAWGANTYGQLGT 267



 Score = 47.0 bits (110), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 43/182 (23%)

Query: 73  SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLT 131
           +L + D  EVF +G +    LG  + D +S  +PK+++ L    +     G   H L+ T
Sbjct: 34  ALYVTDNDEVFVFGMNYSNCLG--TGDSQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91

Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
             GVV                                      Y WG+N Y Q+G   +N
Sbjct: 92  EDGVV--------------------------------------YAWGHNGYSQLGNGTTN 113

Query: 192 TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQ 250
             +   Q   +L+   +  +ACG++HS  L+     ++A+G  +  Q+ S  + ++ TP+
Sbjct: 114 QGIAPIQVCTNLLIKQVVEVACGSHHSMALAAD-GEVFAWGYNNCGQVGSGSTANQPTPR 172

Query: 251 LI 252
            +
Sbjct: 173 KV 174


>gi|427795769|gb|JAA63336.1| Putative e3 ubiquitin-protein ligase herc2, partial [Rhipicephalus
           pulchellus]
          Length = 561

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 99/230 (43%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL   G+V+ WG +  GQ+G  S    +Q  P++V          +  G   C+
Sbjct: 166 GSHHSLALTTNGDVYAWGQNNCGQVG--SGSTTNQPTPRKVS---------SGIGGRRCI 214

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +    G   S+A+ + GEVF WG + +GQLGL   +  +Q+ P RV  L  V + +   
Sbjct: 215 GVA--CGQTSSMAVMENGEVFGWGYNGNGQLGL--GNNVNQTSPCRVTNLQGVVIHKVVC 270

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H + L+  GV                                      LYTWG N Y
Sbjct: 271 GYAHTMALSDEGV--------------------------------------LYTWGANSY 292

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N    V+ P ++ + +   + + A   NH   +    SR+Y +G
Sbjct: 293 GQLGTGNKANQVS-PFKMPTDIGRIVEIAASHYNHISAVMTQTSRVYMWG 341


>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
          Length = 328

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 70/230 (30%), Positives = 96/230 (41%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS AL   GE++TWG   +G+LG    D  +Q  PK VK L    V+Q   G     
Sbjct: 145 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 201

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     +LAL D G VF+WG    G+LG      +  +IP+ ++ L    V Q   
Sbjct: 202 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 250

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G    L LT SGVV                                      +TWG  +Y
Sbjct: 251 GAQFSLALTKSGVV--------------------------------------WTWGKGDY 272

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
            ++G + S+  V KPQ VE L    I  +A GA H   ++ S  ++YA+G
Sbjct: 273 FRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS-GQVYAWG 320



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 55/254 (21%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           +G  H+ AL   G+VF WG    G+LG  S  + +   P+ ++ L +  +     G SH 
Sbjct: 92  SGGRHATALTVDGKVFWWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 149

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
             LTS+            GE++TWG   +G+LG    D  +Q  PK VK L    V+Q  
Sbjct: 150 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQV- 194

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
                                  CGS  +Q +             +L   G +++WG+ +
Sbjct: 195 ----------------------ACGSRDAQTL-------------ALTDEGLVFSWGDGD 219

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           +G++G   S      PQ +E L    +  I CGA  S  L+KS   ++ +G G   +L  
Sbjct: 220 FGKLGRGGSEG-CNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDYFRLGH 277

Query: 242 PKSVH-KTPQLIHG 254
              VH + PQ++ G
Sbjct: 278 GSDVHVRKPQVVEG 291



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 52/209 (24%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
           G+V+  G  T+G+LGL      +  IP+++  L+S  VV+  A +S         G  H+
Sbjct: 49  GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 97

Query: 74  LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            AL   G+VF WG    G+LG  S  + +   P+ ++ L +  +     G SH   LTSS
Sbjct: 98  TALTVDGKVFWWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 155

Query: 134 GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
           G                                      ELYTWG  EYG++G +  NTT
Sbjct: 156 G--------------------------------------ELYTWGLGEYGRLG-HGDNTT 176

Query: 194 VTKPQRVESLVNLPIALIACGANHSFVLS 222
             KP+ V+ L+   +  +ACG+  +  L+
Sbjct: 177 QLKPKMVKVLLGHRVIQVACGSRDAQTLA 205



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 64/232 (27%), Positives = 98/232 (42%), Gaps = 36/232 (15%)

Query: 85  WGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKEN 143
           WG +   QLG     K    +P   + L++++VVQ   G      +T  G V  C    N
Sbjct: 2   WGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATN 59

Query: 144 G-------CGSDP---------SQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGI 187
           G        G+ P         S  V+   V       T+L   G+++ WG  + G++G 
Sbjct: 60  GRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLG- 118

Query: 188 NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD------- 240
           + S     KP+ +E+L    I  IACG++HS  L+ S   LY +G+G   +L        
Sbjct: 119 HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS-GELYTWGLGEYGRLGHGDNTTQ 177

Query: 241 -SPKSV-----HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGG 286
             PK V     H+  Q+  G   A  +A+T  ++ LV   G     K+  GG
Sbjct: 178 LKPKMVKVLLGHRVIQVACGSRDAQTLALT--DEGLVFSWGDGDFGKLGRGG 227



 Score = 51.6 bits (122), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 14/92 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G   SLAL   G V+TWG   + +LG   +D   +  P+ V+GL    +V    G  HCL
Sbjct: 251 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 308

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLG 94
            +T            D G+V+ WG + HGQ G
Sbjct: 309 AVT------------DSGQVYAWGDNDHGQQG 328


>gi|302876126|ref|YP_003844759.1| chromosome condensation regulator RCC1 [Clostridium cellulovorans
           743B]
 gi|302578983|gb|ADL52995.1| regulator of chromosome condensation RCC1 [Clostridium
           cellulovorans 743B]
          Length = 852

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 36/246 (14%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LAL   G +++WG + +GQLG  + +  + +IP +V G   ++ + +  G        
Sbjct: 146 HTLALKADGTLWSWGQNQYGQLG--TGNTTNSNIPLQVPGQIGITSISSGGG-------- 195

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 HSL + + G V++WG +  GQLG  +    +   P ++ GL    ++   AG  
Sbjct: 196 ------HSLVIKNDGTVWSWGCNNFGQLG--NGTNSNNPTPHQISGLN--GIINVSAGVI 245

Query: 126 HCLVLTSSGVV---TCTHK---ENGCGSDPSQGVQSN------LVQDSHTTITSLNSPGE 173
           H   L S G V    C  +    NG   D    VQ+N       +       +++ S G 
Sbjct: 246 HSTALKSDGTVWNWGCNFRGELANGNKIDSYIPVQANGLNGIIAITAGWEFSSAIKSDGT 305

Query: 174 LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
            + WG N+YGQ+G N S + VT P +V SL    I  I  GA ++  L K+   ++AFG 
Sbjct: 306 FWVWGVNDYGQLG-NGSKSDVTSPMQVSSLSG--ITAIDTGATYTVAL-KTDGNIFAFGE 361

Query: 234 GSAVQL 239
            +  QL
Sbjct: 362 NTYGQL 367



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 109/249 (43%), Gaps = 63/249 (25%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           ++AL + G V++WG + +G LG +     S S P +VKGL  ++ +   AG++H +    
Sbjct: 47  TIALKNDGTVWSWGFNQNGHLG-DGTTSNSNS-PVQVKGLNGITAI--SAGWAHFV---- 98

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
                   AL   G V+TWG    G+LG        ++ P  + GL  ++ +   AG++H
Sbjct: 99  --------ALKSDGTVWTWGVGYSGELG--DGTNSLRTTPAPINGLTGITAI--SAGWNH 146

Query: 127 CLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG 186
            L                                      +L + G L++WG N+YGQ+G
Sbjct: 147 TL--------------------------------------ALKADGTLWSWGQNQYGQLG 168

Query: 187 INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL-DSPKSV 245
             N+ T    P +V   +   I  I+ G  HS V+ K+   ++++G  +  QL +   S 
Sbjct: 169 TGNT-TNSNIPLQVPGQIG--ITSISSGGGHSLVI-KNDGTVWSWGCNNFGQLGNGTNSN 224

Query: 246 HKTPQLIHG 254
           + TP  I G
Sbjct: 225 NPTPHQISG 233


>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
 gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
          Length = 1229

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 44/260 (16%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  H+ AL + G V+ WG   +GQLGL   D      P+ +  LA+ +V+          
Sbjct: 885  GKNHTTALTNNG-VYAWGCSKYGQLGL--GDVYESPYPRLITSLANENVI---------- 931

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
              T + G +H+LAL + G+VF WG   HGQLGL + D   Q +P  V  L    +    A
Sbjct: 932  --TLSCGQFHTLALTEKGQVFAWGWGVHGQLGLGNID--DQRLPVCVNHLKDQVIKDIAA 987

Query: 123  GYSHCLVLTSSGVV----TCTHKENGCGSDPS-------QGVQSNLVQDS---------- 161
            G+ H LVL+  G +    +    + G G+          QG+   ++  +          
Sbjct: 988  GHGHSLVLSDKGQIFSFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIATGYFHSISCG 1047

Query: 162  --HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
              H+ +  L   G +YTWG +  GQ+G N  +  VT P ++          I+CG   + 
Sbjct: 1048 CHHSAL--LTVSGGVYTWGRSLDGQLG-NGGHKEVTAPTQINENT-FKADCISCGCEFTA 1103

Query: 220  VLSKSVSRLYAFGIGSAVQL 239
               K   +++ +G  S  Q+
Sbjct: 1104 AQEKQTGKIFCWGSNSVGQV 1123



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 150/358 (41%), Gaps = 56/358 (15%)

Query: 9    ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTT 68
            AL   G ++TWG    G LG +       S+P  +  L    +           VL    
Sbjct: 836  ALIRNGTIYTWGQTVKGCLG-QGPTMSRHSLPSPISLLNCFKLE----------VLYVAC 884

Query: 69   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 128
            G  H+ AL + G V+ WG   +GQLGL   D      P+ +  LA+ +V+    G  H L
Sbjct: 885  GKNHTTALTNNG-VYAWGCSKYGQLGL--GDVYESPYPRLITSLANENVITLSCGQFHTL 941

Query: 129  VLTSSGVVTC----THKENGCGSDPSQ-------GVQSNLVQD---SHTTITSLNSPGEL 174
             LT  G V       H + G G+   Q        ++  +++D    H     L+  G++
Sbjct: 942  ALTEKGQVFAWGWGVHGQLGLGNIDDQRLPVCVNHLKDQVIKDIAAGHGHSLVLSDKGQI 1001

Query: 175  YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL-------IACGANHSFVLSKSVSR 227
            +++G+  +GQ+G  N+ T  + P  ++ +    I +       I+CG +HS +L+ S   
Sbjct: 1002 FSFGSGVFGQLGTGNT-TKSSVPVLIQGISEKIILIATGYFHSISCGCHHSALLTVS-GG 1059

Query: 228  LYAFGIGSAVQLDSP--KSVHKTPQLIHGPWIASPVA----MTAGEDSLVSHSGGLVVKK 281
            +Y +G     QL +   K V    Q+    + A  ++     TA ++            K
Sbjct: 1060 VYTWGRSLDGQLGNGGHKEVTAPTQINENTFKADCISCGCEFTAAQEKQTG--------K 1111

Query: 282  IYSGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLD 339
            I+  G +S+  V  ++  +      V   AT+ LD     LK C+R V  L  + +L+
Sbjct: 1112 IFCWGSNSVGQVRVTNLAI-----PVKESATKSLDGKLVMLKSCKRIVRLLDRNTSLN 1164


>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
          Length = 566

 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 95/230 (41%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+ L   GEV+TWG +  GQ+G  S    +Q IP+RV       VV   A    C 
Sbjct: 176 GSHHSMVLTSDGEVYTWGYNNSGQVG--SGSTANQPIPRRVTSCLQNKVVVNIACGQMC- 232

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     S+A+ + GEV+ WG + +GQLGL S+   +Q  P R+  L  + V +   
Sbjct: 233 ----------SMAVVENGEVYVWGYNGNGQLGLGSSG--NQPTPCRIAALQGIRVQRVAC 280

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H LVLT  G                                      ++Y WG N Y
Sbjct: 281 GCAHTLVLTDEG--------------------------------------QIYAWGANSY 302

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N +   + P  V    +  + + AC + H+        ++Y +G
Sbjct: 303 GQLGTGNKSNQ-SYPTTVTVDKDRVVEIAACHSAHTSAAKTQSGQVYMWG 351



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 40/167 (23%)

Query: 81  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
           EVF  G +  G LG  + D +S   PKR+  L    +  AC  Y                
Sbjct: 82  EVFVLGMNCSGCLG--TGDIQSTIEPKRLDSLCGKKI--ACLSY---------------- 121

Query: 141 KENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRV 200
                GS P            H  + +    GE+YTWG+N Y Q+G   +N  +   Q  
Sbjct: 122 -----GSGP------------HVVLAT--EEGEVYTWGHNAYSQLGNGTTNHGLVPCQVS 162

Query: 201 ESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK 247
            +LVN  +  +ACG++HS VL+ S   +Y +G  ++ Q+ S  + ++
Sbjct: 163 TNLVNKKVIEVACGSHHSMVLT-SDGEVYTWGYNNSGQVGSGSTANQ 208



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 91/227 (40%), Gaps = 57/227 (25%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
           EVF  G +  G LG  + D +S   PKR+  L    +  AC  Y         +G    L
Sbjct: 82  EVFVLGMNCSGCLG--TGDIQSTIEPKRLDSLCGKKI--ACLSYG--------SGPHVVL 129

Query: 75  ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHCLVLTSS 133
           A  + GEV+TWG + + QLG  +       +P +V   L +  V++   G  H +VLTS 
Sbjct: 130 ATEE-GEVYTWGHNAYSQLG--NGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSD 186

Query: 134 GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
           G                                      E+YTWG N  GQ+G + S   
Sbjct: 187 G--------------------------------------EVYTWGYNNSGQVG-SGSTAN 207

Query: 194 VTKPQRVES-LVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
              P+RV S L N  +  IACG   S  + ++   +Y +G     QL
Sbjct: 208 QPIPRRVTSCLQNKVVVNIACGQMCSMAVVEN-GEVYVWGYNGNGQL 253


>gi|313236433|emb|CBY11750.1| unnamed protein product [Oikopleura dioica]
          Length = 2239

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 107/262 (40%), Gaps = 84/262 (32%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKG---------------------------- 45
             + + WGG  HGQLGL     +  ++P+R++                             
Sbjct: 1383 AKAYVWGGVRHGQLGLNMNVGRHCALPRRLEAFDNMQTIELGLNCTFLCSASGAVTSTGE 1442

Query: 46   -------------LASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQ 92
                         L+  S+V A  G+    + +S     H+LA+ + GE+FTWG   +G+
Sbjct: 1443 GSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSSVGSDGHTLAITESGELFTWGDGDYGK 1502

Query: 93   LGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQG 152
            LG  ++++  Q  P+ V+ L   +VV  C GY H  V+T++G                  
Sbjct: 1503 LGHGNSER--QRRPRLVETLVGETVVDGCCGYKHTAVVTATGY----------------- 1543

Query: 153  VQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIA 212
                                 LYT+G  +YG++G  N+ +  T P  V    N  IA ++
Sbjct: 1544 ---------------------LYTFGYGDYGRLGHGNTTSKKT-PTLVHDCQN--IASVS 1579

Query: 213  CGANHSFVLSKSVSRLYAFGIG 234
            CG NH+  LS+    ++AFG G
Sbjct: 1580 CGLNHTLALSRDGMTVWAFGDG 1601



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 58/218 (26%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            H+LA+ + GE+FTWG   +G+LG  ++++  Q  P+ V+ L   +VV  C GY H  V+T
Sbjct: 1482 HTLAITESGELFTWGDGDYGKLGHGNSER--QRRPRLVETLVGETVVDGCCGYKHTAVVT 1539

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKGLASVSVVQACAGY 124
            +T            G ++T+G   +G+LG   +  KK+ ++    + +ASVS      G 
Sbjct: 1540 AT------------GYLYTFGYGDYGRLGHGNTTSKKTPTLVHDCQNIASVS-----CGL 1582

Query: 125  SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
            +H L L+  G+                                      ++ +G+ ++G+
Sbjct: 1583 NHTLALSRDGMT-------------------------------------VWAFGDGDFGK 1605

Query: 185  MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            +G+ N+   V  P ++ +L N+ I  + CG   S  L+
Sbjct: 1606 LGLGNT-LAVQSPNKIAALENVGIKSVHCGHQWSVFLA 1642


>gi|386724712|ref|YP_006191038.1| hypothetical protein B2K_21665 [Paenibacillus mucilaginosus K02]
 gi|384091837|gb|AFH63273.1| hypothetical protein B2K_21665 [Paenibacillus mucilaginosus K02]
          Length = 338

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 73/233 (31%), Positives = 103/233 (44%), Gaps = 38/233 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA+   G V+ WG +T+GQLG  + D  S+S P +V+GL SV  V A +G     
Sbjct: 88  GSSHSLAVKADGSVWAWGWNTYGQLGDGTTD--SRSTPVQVEGLDSVVAVAAGSG----- 140

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HSLA+   G V+ WG +  GQLG         ++P +V GL   SVV   A
Sbjct: 141 ---------HSLAVKADGSVWAWGANWSGQLG--DGTYTESTVPVQVTGLG--SVVSVSA 187

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTT--------------ITSL 168
           G +    L S G V      N  G   S+   SN       T                +L
Sbjct: 188 GNTFSSALKSDGTV-WAWGANDSGQLGSETAASNSPSPVQVTGMASAAAISSGSDYSLAL 246

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
            + G ++ WG N  GQ+G N + T+ + P +V  L +  +  +A G  H   +
Sbjct: 247 KNDGTVWAWGYNSSGQLG-NGTTTSSSAPVQVTRLGS--VVSVAAGPLHGLAV 296



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 80/285 (28%), Positives = 130/285 (45%), Gaps = 37/285 (12%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           S A+   G  + WG +  GQLG        +  P +V+GL SV  ++A            
Sbjct: 42  SFAVRSDGTAWAWGSNLFGQLG--DGTTYDRLTPVQVQGLHSVVALEA------------ 87

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
             G  HSLA+   G V+ WG +T+GQLG  + D  S+S P +V+GL   SVV   AG  H
Sbjct: 88  --GSSHSLAVKADGSVWAWGWNTYGQLGDGTTD--SRSTPVQVEGLD--SVVAVAAGSGH 141

Query: 127 CLVLTSSGVVTCTHKE------NGCGSDPSQGVQSN------LVQDSHTTITSLNSPGEL 174
            L + + G V            +G  ++ +  VQ         V   +T  ++L S G +
Sbjct: 142 SLAVKADGSVWAWGANWSGQLGDGTYTESTVPVQVTGLGSVVSVSAGNTFSSALKSDGTV 201

Query: 175 YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
           + WG N+ GQ+G   + +    P +V  + +      + G+++S  L K+   ++A+G  
Sbjct: 202 WAWGANDSGQLGSETAASNSPSPVQVTGMASAAAI--SSGSDYSLAL-KNDGTVWAWGYN 258

Query: 235 SAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGE-DSLVSHSGGLV 278
           S+ QL +  +   +   +    + S V++ AG    L   SGG V
Sbjct: 259 SSGQLGNGTTTSSSAP-VQVTRLGSVVSVAAGPLHGLAVQSGGTV 302



 Score = 51.6 bits (122), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 16/88 (18%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +SLAL + G V+ WG ++ GQLG  +    S S P +V  L SV  V A           
Sbjct: 242 YSLALKNDGTVWAWGYNSSGQLG--NGTTTSSSAPVQVTRLGSVVSVAA----------- 288

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQL 93
              G  H LA+   G V+ WG +T+GQL
Sbjct: 289 ---GPLHGLAVQSGGTVWDWGNNTYGQL 313


>gi|307686853|ref|ZP_07629299.1| regulator of chromosome condensation RCC1 [Clostridium
           cellulovorans 743B]
          Length = 671

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 36/246 (14%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LAL   G +++WG + +GQLG  + +  + +IP +V G   ++ + +  G        
Sbjct: 146 HTLALKADGTLWSWGQNQYGQLG--TGNTTNSNIPLQVPGQIGITSISSGGG-------- 195

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 HSL + + G V++WG +  GQLG  +    +   P ++ GL    ++   AG  
Sbjct: 196 ------HSLVIKNDGTVWSWGCNNFGQLG--NGTNSNNPTPHQISGLN--GIINVSAGVI 245

Query: 126 HCLVLTSSGVV---TCTHK---ENGCGSDPSQGVQSN------LVQDSHTTITSLNSPGE 173
           H   L S G V    C  +    NG   D    VQ+N       +       +++ S G 
Sbjct: 246 HSTALKSDGTVWNWGCNFRGELANGNKIDSYIPVQANGLNGIIAITAGWEFSSAIKSDGT 305

Query: 174 LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
            + WG N+YGQ+G N S + VT P +V SL    I  I  GA ++  L K+   ++AFG 
Sbjct: 306 FWVWGVNDYGQLG-NGSKSDVTSPMQVSSLSG--ITAIDTGATYTVAL-KTDGNIFAFGE 361

Query: 234 GSAVQL 239
            +  QL
Sbjct: 362 NTYGQL 367



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 109/249 (43%), Gaps = 63/249 (25%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           ++AL + G V++WG + +G LG +     S S P +VKGL  ++ +   AG++H +    
Sbjct: 47  TIALKNDGTVWSWGFNQNGHLG-DGTTSNSNS-PVQVKGLNGITAI--SAGWAHFV---- 98

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
                   AL   G V+TWG    G+LG        ++ P  + GL  ++ +   AG++H
Sbjct: 99  --------ALKSDGTVWTWGVGYSGELG--DGTNSLRTTPAPINGLTGITAI--SAGWNH 146

Query: 127 CLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG 186
            L                                      +L + G L++WG N+YGQ+G
Sbjct: 147 TL--------------------------------------ALKADGTLWSWGQNQYGQLG 168

Query: 187 INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL-DSPKSV 245
             N+ T    P +V   +   I  I+ G  HS V+ K+   ++++G  +  QL +   S 
Sbjct: 169 TGNT-TNSNIPLQVPGQIG--ITSISSGGGHSLVI-KNDGTVWSWGCNNFGQLGNGTNSN 224

Query: 246 HKTPQLIHG 254
           + TP  I G
Sbjct: 225 NPTPHQISG 233


>gi|390368352|ref|XP_782647.3| PREDICTED: probable E3 ubiquitin-protein ligase HECTD2-like
           [Strongylocentrotus purpuratus]
          Length = 216

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 68/98 (69%), Gaps = 3/98 (3%)

Query: 727 ETRSIWF--SEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLK 784
           E R+IW   SE + +  +   L+GTL GLAIYN  I+++ FP+A+YKK+ ++P+ L+DL 
Sbjct: 29  ENRTIWINGSEGSTDSDDEFELVGTLLGLAIYNGIILDVNFPMAIYKKLHEDPMTLEDLI 88

Query: 785 DLSPTLAKSLQDILDYREPDLEDVFGITFRNWYLLMSD 822
            + P+L + ++++L+Y E D+EDVF  TF+  YL M D
Sbjct: 89  GVQPSLGRGIREMLEY-EGDVEDVFCQTFQVSYLSMGD 125



 Score = 42.7 bits (99), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 42/108 (38%)

Query: 1041 GGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISK 1100
            GG+++EF  L+ + + +P YGMF    E R+IW                           
Sbjct: 2    GGLQKEFFQLISEAVFNPSYGMFVSSSENRTIW--------------------------- 34

Query: 1101 YSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYN---YTVRFP 1145
                        I  SE + +  + + L+GTL GLAIYN     V FP
Sbjct: 35   ------------INGSEGSTDSDDEFELVGTLLGLAIYNGIILDVNFP 70


>gi|328712024|ref|XP_001948029.2| PREDICTED: hypothetical protein LOC100158844 [Acyrthosiphon pisum]
          Length = 1626

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 106/230 (46%), Gaps = 58/230 (25%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G  HS+AL   G V++WG + +GQLG  +  +     P  V  L            S+ L
Sbjct: 857  GRNHSIALTTNG-VYSWGSNHYGQLG--TGRRGQAPYPMLVDSL------------SNEL 901

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +++ + G +HSLA++  G+++TWG   +GQLG  + D   +  PK +K L + +++ A  
Sbjct: 902  IVSVSAGQYHSLAISASGQLWTWGWGVYGQLGHGAIDDCEK--PKLLKSLENENIISAYG 959

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
            GYSH ++LTS+G V                                      +T+G+  +
Sbjct: 960  GYSHSIILTSNGKV--------------------------------------FTFGSGSF 981

Query: 183  GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
            GQ+G N S T +T P  V  L   PI  I     H+  LS  V RLY +G
Sbjct: 982  GQLG-NGSTTKITSPVPVYGLPE-PIKCIYTAYFHNLALS-DVGRLYTWG 1028



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 104/248 (41%), Gaps = 66/248 (26%)

Query: 15   EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLA--SVSVVQACAGYSHCLVLTSTTGLWH 72
            +++TWG  ++G LG+     K+ + P  V       V V+Q   G +H + LT T G   
Sbjct: 814  KLYTWGHSSYGCLGVGPHMTKT-ATPNPVSWFVYIRVEVIQVACGRNHSIALT-TNG--- 868

Query: 73   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 132
                     V++WG + +GQLG  +  +     P  V  L++  +V   AG  H L +++
Sbjct: 869  ---------VYSWGSNHYGQLG--TGRRGQAPYPMLVDSLSNELIVSVSAGQYHSLAISA 917

Query: 133  SGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNT 192
            SG                                      +L+TWG   YGQ+G + +  
Sbjct: 918  SG--------------------------------------QLWTWGWGVYGQLG-HGAID 938

Query: 193  TVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL--------DSPKS 244
               KP+ ++SL N  I     G +HS +L+ S  +++ FG GS  QL         SP  
Sbjct: 939  DCEKPKLLKSLENENIISAYGGYSHSIILT-SNGKVFTFGSGSFGQLGNGSTTKITSPVP 997

Query: 245  VHKTPQLI 252
            V+  P+ I
Sbjct: 998  VYGLPEPI 1005



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 108/266 (40%), Gaps = 63/266 (23%)

Query: 2    TGLWHSLALNDCGEVFTWGGD-------------THGQLGLESADKKSQSIPKRV---KG 45
            T  +H+LAL+D G ++TWG                  QL L   D+   +    +    G
Sbjct: 1010 TAYFHNLALSDVGRLYTWGSSPQVLRFHAQSQKRARNQLVLNEGDQADDAEIDALTADDG 1069

Query: 46   LASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI 105
            L  +S       +    +     G  HS  ++  G+++TWG +  GQLG+          
Sbjct: 1070 LLHLSPTLVDTSHISGDIFQMCCGCHHSAVISTTGQLYTWGLNLDGQLGVSGI------- 1122

Query: 106  PKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTI 165
              R + + +V++V   +     +++ SS       KE  CG+D +               
Sbjct: 1123 --RERLVPTVTLVGPPS-----VIVDSSSTSGSLIKEVRCGADFT--------------- 1160

Query: 166  TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L++  +L+ WG+N  GQ+G       + +    ++L++  + +I           KS 
Sbjct: 1161 LALDAANKLWGWGSNHEGQLG------KIPEEDLAKTLLDGKMVMI-----------KST 1203

Query: 226  SRLYAFGIGSAVQLDSPKSVHKTPQL 251
            +++     G+  +LDSP  +   PQL
Sbjct: 1204 NKVIKIQHGTVNKLDSPIEI-LLPQL 1228


>gi|357613967|gb|EHJ68816.1| putative X-linked retinitis pigmentosa GTPase regulator [Danaus
           plexippus]
          Length = 733

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 122/264 (46%), Gaps = 49/264 (18%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS  + + G VF +G +  GQLGL   D+ ++  P  VK L          G +H +
Sbjct: 63  GDEHSAVICEKGRVFVFGANAWGQLGLGHKDEVTR--PSCVKFLKPHRATFVACGRAHTV 120

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T T  ++ S+  ND            GQLG  S D +  S+P+ V     V+V Q  A
Sbjct: 121 FVTDTNAIY-SVGCND-----------EGQLG--SGDLEHHSVPQYVD--LEVTVKQVSA 164

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITS--------------- 167
           G +H  +LT  G V        CGS+ S+G Q  L +D  + ++                
Sbjct: 165 GSNHTALLTEDGRVFV------CGSN-SEG-QLGLGEDRRSALSFTELKFMESIAFVECG 216

Query: 168 ------LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
                 + + G ++  G+NE  ++GI N+++ +  PQ +   +++ I    CGANH+F+L
Sbjct: 217 YYHTVFITAKGAVFVTGDNENQKLGIQNTSSILYVPQVLP--LDVHIKSACCGANHTFLL 274

Query: 222 SKSVSRLYAFGIGSAVQLDSPKSV 245
           S   S++ AFG     QL  PK V
Sbjct: 275 SMDESKILAFGSNEKGQLGMPKEV 298



 Score = 73.2 bits (178), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 146/332 (43%), Gaps = 63/332 (18%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H++ + D   +++ G +  GQLG  S D +  S+P+ V     V+V Q  AG +H  
Sbjct: 115 GRAHTVFVTDTNAIYSVGCNDEGQLG--SGDLEHHSVPQYVD--LEVTVKQVSAGSNHTA 170

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           +LT              G VF  G ++ GQLGL   D++S      +K + S++ V+   
Sbjct: 171 LLTED------------GRVFVCGSNSEGQLGL-GEDRRSALSFTELKFMESIAFVEC-- 215

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQ-------------------SNLVQDSHT 163
           GY H + +T+ G V  T    G   +   G+Q                   S     +HT
Sbjct: 216 GYYHTVFITAKGAVFVT----GDNENQKLGIQNTSSILYVPQVLPLDVHIKSACCGANHT 271

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVES---LVNLPIALIACGANH-SF 219
            + S++   ++  +G+NE GQ+G+      VT P  ++         + L+ACGA H +F
Sbjct: 272 FLLSMDE-SKILAFGSNEKGQLGMPKEVVNVTLPTEIDMEKMFDGYQLKLVACGAMHTAF 330

Query: 220 VLSKSVSRLYAFGIG--SAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGL 277
           V    +  LY  G    + + L+       +  L   P   +P+ +TA          G 
Sbjct: 331 VTDNGL--LYTCGEARHNKLCLEETDDNTNSNDL---PNQYTPMRVTA--------MNGF 377

Query: 278 VVKKIYSGGDHSIVTVTKSSD-GVLSDDFRVL 308
           V+  +  GG H+++T TK S+    ++DF ++
Sbjct: 378 VIDNVACGGCHTLLTATKGSNVDFTNNDFSII 409


>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 124/262 (47%), Gaps = 33/262 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L +   G+V +WG + +GQLGL   + +   +P+++K    V V    AG  H     
Sbjct: 137 HCLTVTFNGQVHSWGRNQNGQLGL--GNNQDSLLPQKIKAFEGVCVKMIAAGAEH----- 189

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  + A+ + G+++ WG   +G LGL  +D+  +S+P++V  +    +V    G+ 
Sbjct: 190 -------TTAITEGGDLYGWGWGRYGNLGL--SDRDDRSVPEKVSSVEGEKMVLVACGWR 240

Query: 126 HCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNS----------P 171
           H + ++SSG +       + + G G      V   L       I+ ++            
Sbjct: 241 HSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAED 300

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G+LY WG N++GQ+G+ + N     P  V       I  +ACG  H+  L+++   ++++
Sbjct: 301 GKLYGWGWNKFGQVGVED-NVDHCSPVEVNFPDEQKIVQVACGWRHTLALTEN-KNIFSW 358

Query: 232 GIGSAVQLDSPKSVHK-TPQLI 252
           G G++ QL   + + + TP++I
Sbjct: 359 GRGASGQLGHGEIIDRNTPKMI 380



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 97/235 (41%), Gaps = 57/235 (24%)

Query: 6   HSLALNDCG-EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
           H++A +D   ++++WG    G+LG    +      P+ +  L  + + Q   G SHCL +
Sbjct: 84  HTIAYSDDEMQLYSWGWGDFGRLG--HGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTV 141

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
           T              G+V +WG + +GQLGL   + +   +P+++K    V V    AG 
Sbjct: 142 TFN------------GQVHSWGRNQNGQLGL--GNNQDSLLPQKIKAFEGVCVKMIAAGA 187

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
            H   +T  G                                      +LY WG   YG 
Sbjct: 188 EHTTAITEGG--------------------------------------DLYGWGWGRYGN 209

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           +G+++ +   + P++V S+    + L+ACG  HS  +S S   LY +G     QL
Sbjct: 210 LGLSDRDDR-SVPEKVSSVEGEKMVLVACGWRHSVSVSSS-GALYTYGWSKYGQL 262



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/229 (21%), Positives = 92/229 (40%), Gaps = 55/229 (24%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS AL     V +WG    GQLG    D + + +P  +       V     G  H +  +
Sbjct: 32  HSAALLSGQMVCSWGRGEDGQLG--HGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYS 89

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                      +D  ++++WG    G+LG    +      P+ +  L  + + Q   G S
Sbjct: 90  -----------DDEMQLYSWGWGDFGRLG--HGNSSDVFNPQPIVALQGMKIKQIACGDS 136

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
           HCL +T +G                                      ++++WG N+ GQ+
Sbjct: 137 HCLTVTFNG--------------------------------------QVHSWGRNQNGQL 158

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
           G+ N+  ++  PQ++++   + + +IA GA H+  +++    LY +G G
Sbjct: 159 GLGNNQDSLL-PQKIKAFEGVCVKMIAAGAEHTTAITEG-GDLYGWGWG 205


>gi|15218867|ref|NP_176767.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|6227017|gb|AAF06053.1|AC009513_9 Contains PF|00169 Pleckstrin homology domain, 6 PF|00415 Regulator
           of chromosome condensation (RCC1) domains and a PF|01363
           FYVE Zinc finger domain [Arabidopsis thaliana]
 gi|332196320|gb|AEE34441.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1006

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 100/232 (43%), Gaps = 27/232 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLG---LESADKKSQSIPKRVKGLASVSVVQACAGYS 59
           G WH+  +   G++FT+G  T G LG   LES  K     PK V+ L  + V+    G  
Sbjct: 403 GAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTK-----PKEVESLRRMKVISVSCGPW 457

Query: 60  HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ 119
           H   +  T           CG++FTWG    G+LG   AD K + +P  V  L     ++
Sbjct: 458 HTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLG--HADSKRKLVPTCVTELIDHDFIK 515

Query: 120 ACAGYSHCLVLTSSGVV----TCTHKENGCGSDPSQGVQ-----------SNLVQDSHTT 164
              G++  + L+ SG V    +  H + GC     + V             ++   SH  
Sbjct: 516 VSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSH-H 574

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN 216
           +  L S G +YTWG    GQ+G+ +       P  VE L +  +  IACG N
Sbjct: 575 VAVLTSFGNVYTWGKGMNGQLGLGDVRDR-NSPVLVEPLGDRLVESIACGLN 625



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 115/294 (39%), Gaps = 77/294 (26%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHC 61
           G  H+  +   GEVF WG    G+LGL+         PKRV+ L  V+V   AC+ +  C
Sbjct: 300 GAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDH--PKRVESLEDVAVRSVACSDHQTC 357

Query: 62  LV--------------------------------------LTSTTGLWHSLALNDCGEVF 83
            V                                      L+   G WH+  +   G++F
Sbjct: 358 AVTESGELYLWGIDGGTIEQSGSQFLTRKISDVLGGSLTVLSVACGAWHTAIVTSSGQLF 417

Query: 84  TWGGDTHGQLG---LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
           T+G  T G LG   LES  K     PK V+ L  + V+    G  H    T++ V T   
Sbjct: 418 TYGSGTFGVLGHGSLESVTK-----PKEVESLRRMKVISVSCGPWH----TAAIVETAND 468

Query: 141 KENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRV 200
           ++                        +  S G+L+TWG+ + G++G  +S   +  P  V
Sbjct: 469 RK----------------------FYNAKSCGKLFTWGDGDKGRLGHADSKRKLV-PTCV 505

Query: 201 ESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHG 254
             L++     ++CG   +  LS S + +Y  G     QL  P++  K+  ++ G
Sbjct: 506 TELIDHDFIKVSCGWTLTVALSISGT-VYTMGSSIHGQLGCPRAKDKSVNVVLG 558


>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
 gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 123/262 (46%), Gaps = 33/262 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LA+   GEV +WG + +GQLGL   D +   +P++++    + +    AG  H   +T
Sbjct: 131 HCLAVTMEGEVQSWGRNQNGQLGL--GDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVT 188

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                         G+++ WG   +G LGL   D+  + +P+RV       +     G+ 
Sbjct: 189 ED------------GDLYGWGWGRYGNLGL--GDRNDRLVPERVTSAGGEKMSMVACGWR 234

Query: 126 HCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTIT----------SLNSP 171
           H + ++ SG +       + + G G      +   L   S++ I+          +L S 
Sbjct: 235 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD 294

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G+LY WG N++GQ+G+ N N     P +V    +  +  ++CG  H+  +++  + ++A+
Sbjct: 295 GKLYGWGWNKFGQVGVGN-NLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTER-NNVFAW 352

Query: 232 GIGSAVQLDSPKSVHKT-PQLI 252
           G G+  QL   +SV +  P++I
Sbjct: 353 GRGTNGQLGIGESVDRNFPKII 374



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 108/252 (42%), Gaps = 31/252 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS+AL     V +WG    GQLG    D + +  P ++  L    +V    G  H 
Sbjct: 22  AGASHSVALLSGDIVCSWGRGEDGQLG--HGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
            V  S +G+          EV++WG    G+LG  ++      +P  +K L  + + Q  
Sbjct: 80  -VAYSQSGM----------EVYSWGWGDFGRLGHGNSSDLFTPLP--IKALHGIRIKQIA 126

Query: 122 AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITS 167
            G SHCL +T  G V    +      G G              +G++  +V        +
Sbjct: 127 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAA 186

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           +   G+LY WG   YG +G+ + N  +  P+RV S     ++++ACG  H+  +S S + 
Sbjct: 187 VTEDGDLYGWGWGRYGNLGLGDRNDRLV-PERVTSAGGEKMSMVACGWRHTISVSYSGA- 244

Query: 228 LYAFGIGSAVQL 239
           LY +G     QL
Sbjct: 245 LYTYGWSKYGQL 256


>gi|218185898|gb|EEC68325.1| hypothetical protein OsI_36421 [Oryza sativa Indica Group]
          Length = 425

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 116/269 (43%), Gaps = 37/269 (13%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS A+   G++F WG ++ GQLGL     K  S P++V  LA   V     G  H     
Sbjct: 136 HSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADSRVKMVALGSEH----- 190

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLG-------LESADKKSQSIPKRVKGLASVSVV 118
                  S+A  + GEV +WG    G+LG       L  +   S+  P+ +K L  V + 
Sbjct: 191 -------SIATTEEGEVLSWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIK 243

Query: 119 QACAGYSHCLVLTSSGV--VTCTHKENGCGSDPSQGVQSNLVQDS-----------HTTI 165
           +  AG  H   +   G   +     E G G    + ++  +V++            HT +
Sbjct: 244 RIAAGMLHSACIDEKGTLFIFGQKTEKGFGRSGDE-LRPTVVEEVPFSEEVACGGYHTCV 302

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +   G+LY+WG+NE G +G+  ++   +      SL   P++ ++CG  H+ V+S   
Sbjct: 303 --VTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVISG-- 358

Query: 226 SRLYAFGIGSAVQLDSPKSVHKTPQLIHG 254
             +Y +G G A      +      QL HG
Sbjct: 359 GDIYTWGWGGANGTFFEEGHSSGGQLGHG 387



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 58/131 (44%), Gaps = 14/131 (10%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+L L + G VF  G +  GQLG+ S+   S   P  V G     VV+  AG  H   +T
Sbjct: 84  HTLFLTESGRVFAAGLNDFGQLGIGSSVTHSLE-PIEVSGFDE-KVVEVSAGNHHSCAVT 141

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           +             G++F WG ++ GQLGL     K  S P++V  LA   V     G  
Sbjct: 142 AD------------GKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADSRVKMVALGSE 189

Query: 126 HCLVLTSSGVV 136
           H +  T  G V
Sbjct: 190 HSIATTEEGEV 200


>gi|354500509|ref|XP_003512342.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Cricetulus
           griseus]
 gi|344258048|gb|EGW14152.1| RCC1 and BTB domain-containing protein 1 [Cricetulus griseus]
          Length = 531

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 98/235 (41%), Gaps = 64/235 (27%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V               + CL
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKV---------------TSCL 178

Query: 63  ----VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVV 118
               V++   G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V 
Sbjct: 179 HTKRVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALQSVCVN 236

Query: 119 QACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWG 178
           Q   GY+H L LT  G+                                      LY WG
Sbjct: 237 QIVCGYAHTLALTDEGL--------------------------------------LYAWG 258

Query: 179 NNEYGQMGINNSNTTVT-KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
            N YGQ+G  + N  ++  P  VE    + IA  AC + H+         +Y +G
Sbjct: 259 ANTYGQLGTGSKNNLLSPTPIMVEKERVVEIA--ACHSTHTSAAKTQGGHVYMWG 311



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 109/276 (39%), Gaps = 57/276 (20%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L   + G V+ WG + + QLG  + ++              ++ VQ C       V+ 
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-------------GIAPVQVCTNLLIKQVVE 132

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V        V + A   
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTSCLHTKRVVSIA--- 187

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CG   S  V              L+S GE+Y WG N  GQ+
Sbjct: 188 -------------------CGQTSSMAV--------------LDS-GEVYGWGYNGNGQL 213

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS- 244
           G+ N+   +T P RV +L ++ +  I CG  H+  L+     LYA+G  +  QL +    
Sbjct: 214 GLGNNGNQLT-PVRVAALQSVCVNQIVCGYAHTLALTDE-GLLYAWGANTYGQLGTGSKN 271

Query: 245 --VHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLV 278
             +  TP ++    +    A  +   S     GG V
Sbjct: 272 NLLSPTPIMVEKERVVEIAACHSTHTSAAKTQGGHV 307



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 43/182 (23%)

Query: 73  SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLT 131
           ++ + D  EVF +G +    LG  + D +S  +PK+++ L    +     G   H L+ T
Sbjct: 34  AIYVTDNDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91

Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
             GVV                                      Y WG+N Y Q+G   +N
Sbjct: 92  EDGVV--------------------------------------YAWGHNGYSQLGNGTTN 113

Query: 192 TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQ 250
             +   Q   +L+   +  +ACG++HS  L+     ++A+G  +  Q+ S  + ++ TP+
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAAD-GEVFAWGYNNCGQVGSGSTANQPTPR 172

Query: 251 LI 252
            +
Sbjct: 173 KV 174


>gi|399056402|ref|ZP_10743734.1| Regulator of chromosome condensation (RCC1) repeat containing
           protein [Brevibacillus sp. CF112]
 gi|398046143|gb|EJL38781.1| Regulator of chromosome condensation (RCC1) repeat containing
           protein [Brevibacillus sp. CF112]
          Length = 326

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 71/251 (28%), Positives = 116/251 (46%), Gaps = 32/251 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSL L   G V++WG +++GQLG        Q++P +VKGL +V+ + A + +    
Sbjct: 41  GSRHSLVLKGDGTVWSWGDNSYGQLG--DGTTIQQNVPVQVKGLTNVTRIAAGSDF---- 94

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     SLAL   G V++WG +++GQLG    D K+ +    V+ +    V++  A
Sbjct: 95  ----------SLALKADGTVWSWGNNSYGQLG----DGKTSASYTPVQAVGLTDVIEIAA 140

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTIT------SLNSPGELYT 176
           G +H L L   G V      N   S  S+  Q   + D            ++   G ++ 
Sbjct: 141 GTNHGLALKKDGTVWLWG--NFLNSSYSKPFQVGGIADVKEIAAGSGFNLAVKKDGTVWA 198

Query: 177 WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
           WG N+ GQ+G NN+    + P ++ +L N  I  +A G    + L     ++YA+G    
Sbjct: 199 WGYNDSGQLG-NNNTNNTSSPTKIGTLAN--IVSVATGYESGYALDVD-GKVYAWGYNGY 254

Query: 237 VQLDSPKSVHK 247
            QL    S ++
Sbjct: 255 GQLGDGTSTNR 265



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 45/160 (28%)

Query: 64  LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG 123
           ++S  G  HSL L   G V++WG +++GQLG        Q++P +VKGL +V+ + A   
Sbjct: 36  VSSAAGSRHSLVLKGDGTVWSWGDNSYGQLG--DGTTIQQNVPVQVKGLTNVTRIAA--- 90

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
                                 GSD S                +L + G +++WGNN YG
Sbjct: 91  ----------------------GSDFS---------------LALKADGTVWSWGNNSYG 113

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
           Q+G   ++ + T  Q V  L +  +  IA G NH   L K
Sbjct: 114 QLGDGKTSASYTPVQAV-GLTD--VIEIAAGTNHGLALKK 150



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 57/240 (23%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           SLAL   G V++WG +++GQLG    D K+ +    V+ +    V++  AG +H L L  
Sbjct: 95  SLALKADGTVWSWGNNSYGQLG----DGKTSASYTPVQAVGLTDVIEIAAGTNHGLALKK 150

Query: 67  TTGLW------------------------------HSLALNDCGEVFTWGGDTHGQLGLE 96
              +W                               +LA+   G V+ WG +  GQLG  
Sbjct: 151 DGTVWLWGNFLNSSYSKPFQVGGIADVKEIAAGSGFNLAVKKDGTVWAWGYNDSGQLG-- 208

Query: 97  SADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN 156
           + +  + S P ++  LA++  V    GY     L   G V      NG G     G  +N
Sbjct: 209 NNNTNNTSSPTKIGTLANI--VSVATGYESGYALDVDGKVY-AWGYNGYGQ-LGDGTSTN 264

Query: 157 LVQDSHTT----------------ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRV 200
            +Q    T                + +    G +Y WG   YGQ+G N + +  ++P ++
Sbjct: 265 RLQPVQVTDLTDIEEISSGSYAYHVLARKKDGTIYAWGRGNYGQVG-NGTTSNSSRPVKI 323



 Score = 42.0 bits (97), Expect = 2.2,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 14/104 (13%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           TG     AL+  G+V+ WG + +GQLG  ++  + Q  P +V  L  +  +         
Sbjct: 232 TGYESGYALDVDGKVYAWGYNGYGQLGDGTSTNRLQ--PVQVTDLTDIEEI--------- 280

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI 105
              +S +  +H LA    G ++ WG   +GQ+G  +    S+ +
Sbjct: 281 ---SSGSYAYHVLARKKDGTIYAWGRGNYGQVGNGTTSNSSRPV 321


>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
          Length = 954

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 112/241 (46%), Gaps = 47/241 (19%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHC 61
           G WHS      G+++T+G  T G LG    D+++ + PK V+ L+    ++ AC      
Sbjct: 371 GSWHSALTTSSGKLYTFGDGTFGVLG--HGDRETLAYPKEVEALSGFKTIKVAC------ 422

Query: 62  LVLTSTTGLWHSLAL----NDCG------EVFTWGGDTHGQLGLESADKKSQSIPKRVKG 111
                  G+WHS A+    N  G      +++TWG     +LG    DK+ + +PK V+ 
Sbjct: 423 -------GIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLG--HGDKEPRLVPKCVQA 473

Query: 112 LASVSVVQACAGYSHCLVLTSSG-VVTCTHKENG-CGSDPSQGVQSNLVQD--------- 160
           L   +  Q   G++  + L +SG V T     NG  G+  S G Q  LVQD         
Sbjct: 474 LLEYNFHQLACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEE 533

Query: 161 -----SHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGA 215
                SH T+  L S  E+YTWG    G++G  +      KP  VE+L +  +  I+CG+
Sbjct: 534 ISCGASHVTV--LTSRSEVYTWGMGANGRLGHGDLKDR-KKPCLVEALKDRHVKSISCGS 590

Query: 216 N 216
           N
Sbjct: 591 N 591



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 129/294 (43%), Gaps = 61/294 (20%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+ A+   G++F WG  ++    L    + S  +PK+V G   +  +Q         
Sbjct: 316 GEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSG--PLEGLQ--------- 364

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           VL+   G WHS      G+++T+G  T G LG    D+++ + PK V+ L+    ++   
Sbjct: 365 VLSVACGSWHSALTTSSGKLYTFGDGTFGVLG--HGDRETLAYPKEVEALSGFKTIKVAC 422

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H     S+ +V  T++             +N++              +LYTWG+ + 
Sbjct: 423 GIWH-----SAAIVEVTNQ-----------TGANVMSK------------KLYTWGDGDK 454

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
            ++G  +    +  P+ V++L+      +ACG N +  L+ S  R++  G  S  QL +P
Sbjct: 455 NRLGHGDKEPRLV-PKCVQALLEYNFHQLACGHNMTVALATS-GRVFTMGSSSNGQLGNP 512

Query: 243 KSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKS 296
           KS  K P L+              +D L S     +V++I  G  H  V  ++S
Sbjct: 513 KSDGKQPCLV--------------QDRLASE----LVEEISCGASHVTVLTSRS 548



 Score = 45.8 bits (107), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 18/126 (14%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           ++AL   G VFT G  ++GQLG   +D K   + +    LAS  V +   G SH  VLTS
Sbjct: 489 TVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQ--DRLASELVEEISCGASHVTVLTS 546

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGY 124
            +            EV+TWG   +G+LG    D K +  P  V+ L    V  +   + +
Sbjct: 547 RS------------EVYTWGMGANGRLG--HGDLKDRKKPCLVEALKDRHVKSISCGSNF 592

Query: 125 SHCLVL 130
           + C+ +
Sbjct: 593 TTCICI 598



 Score = 41.2 bits (95), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 4/74 (5%)

Query: 162 HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
           H  +T+    GE++TWG    G++G + ++  +++P+ VESL    + LI+CG  H+  +
Sbjct: 267 HVALTTRQ--GEVFTWGEEFGGRLG-HGTDADISRPKLVESLSLTVVDLISCGEFHTCAV 323

Query: 222 SKSVSRLYAFGIGS 235
           + S   L+ +G GS
Sbjct: 324 TTS-GDLFNWGDGS 336


>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
 gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
          Length = 794

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 120/255 (47%), Gaps = 41/255 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV-VQACAGYSHC 61
           G +H+LA+ D  +++++G  + G LG    D+   ++P  ++ L    V + AC GY   
Sbjct: 95  GRFHTLAVTDSNKLYSFGQGSEGALG--HGDETDLNMPTSIESLEDKDVNIIACGGY--- 149

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                     HS A+   GE++ WG ++ GQLGL     K+ +I          SV+   
Sbjct: 150 ----------HSAAITKNGELYIWGSNSEGQLGL-----KNDTISYPTMLDLGKSVISVA 194

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCG-----------SDPS--QGVQSNLVQ----DSHTT 164
            GY H  V+T+ G +    +  G             + P   +G+   +V+     +HT 
Sbjct: 195 CGYYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVKVACGGNHTV 254

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
             +L + G++YT+G+ + GQ+G+ +       P+ VE+L    I  IACG +H+ V+S  
Sbjct: 255 --ALTASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVS-D 311

Query: 225 VSRLYAFGIGSAVQL 239
              L+ FG G   +L
Sbjct: 312 KGELFTFGDGRHGKL 326



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 4/80 (5%)

Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
           D HT + + N  G L+T+GNNE+GQ+GI  SN T  KP  V++L    I  +A G  H+ 
Sbjct: 44  DEHTVVVTEN--GRLFTFGNNEWGQLGI-GSNKTRNKPTTVKALKPEKITHVAAGRFHTL 100

Query: 220 VLSKSVSRLYAFGIGSAVQL 239
            ++ S ++LY+FG GS   L
Sbjct: 101 AVTDS-NKLYSFGQGSEGAL 119


>gi|160773749|gb|AAI55157.1| Ube3a protein [Danio rerio]
          Length = 766

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 76/151 (50%), Gaps = 18/151 (11%)

Query: 942  PFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTI 1001
            PFI +A  K   L  D RI+M      T  Y  +Q      LN YL ++V RD+I++D +
Sbjct: 372  PFILNAVTKNLGLYYDNRIRMYSERRITALYSLVQG---QQLNPYLRLKVRRDHIIDDAL 428

Query: 1002 REL---AQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDP 1058
              L   A     D KK L             V+F GE+  D GGV +EF  L+++EI +P
Sbjct: 429  VRLEMIAMENPADLKKQL------------YVEFEGEQGVDEGGVSKEFFQLVVEEIFNP 476

Query: 1059 KYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              GMF   E T+  WF+  +FE++  + LIG
Sbjct: 477  DIGMFTYDESTKLFWFNPSSFENEGQFTLIG 507



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 63/95 (66%), Gaps = 2/95 (2%)

Query: 721 GITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPIL 779
           G+  Y+E T+  WF+  +FE++    LIG + GLAIYN  I+++ FP+ +Y+K++ +   
Sbjct: 479 GMFTYDESTKLFWFNPSSFENEGQFTLIGIVLGLAIYNNCILDVHFPMVIYRKLMGKKGT 538

Query: 780 LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
            +DL D  P L +SL+D+++Y E ++E+   ITF+
Sbjct: 539 FRDLADSHPVLFQSLKDLMEY-EGNVEEDMMITFQ 572


>gi|340370446|ref|XP_003383757.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like
           [Amphimedon queenslandica]
          Length = 529

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 128/287 (44%), Gaps = 67/287 (23%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQ-ACAGYSHCLV 63
           H LAL + G ++ WG + +GQLG  S    S ++PK V   L  V V + AC G+     
Sbjct: 86  HVLALTEDGTIYAWGANGYGQLGRGSTSVHS-NLPKPVNHALGGVIVSKVACGGF----- 139

Query: 64  LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG 123
                   HSLAL++ G+V++WG +  GQLG    D  S+  P RV GL           
Sbjct: 140 --------HSLALSNKGDVYSWGFNNCGQLGC--GDTTSRYNPNRVTGLLDGK------- 182

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
                        TC H                 V  +HT+  +L   GE+ +WG N  G
Sbjct: 183 -------------TCIH-----------------VTCNHTSSFALTGEGEILSWGQNGSG 212

Query: 184 QMGINNSNTTVTKPQRVESLVNLP-IALIACGANHSFVLSKSVSRLYAFGIGSAVQL-DS 241
           Q+GI    +T+ + Q V   +N   I  I  G +H+  LS+  S +YA+G  +  QL ++
Sbjct: 213 QLGI---GSTLQQLQPVNVQINDAFIDQIVTGYSHALALSECGS-IYAWGANTHGQLGNA 268

Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSH-SGGLVVKKIYSGGD 287
            K    +P +I+    AS VA        +SH S   +  K+Y  G+
Sbjct: 269 SKQCVSSPTIINNIGRASEVAAIH-----LSHISAATISGKVYIWGE 310



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 87/189 (46%), Gaps = 29/189 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL++ G+V++WG +  GQLG    D  S+  P RV GL              C+
Sbjct: 137 GGFHSLALSNKGDVYSWGFNNCGQLGC--GDTTSRYNPNRVTGLLDGKT---------CI 185

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +T       S AL   GE+ +WG +  GQLG+ S  ++ Q +  ++       + Q   
Sbjct: 186 HVTCNHT--SSFALTGEGEILSWGQNGSGQLGIGSTLQQLQPVNVQIN---DAFIDQIVT 240

Query: 123 GYSHCLVLTSSGVVTC----THKENG-----CGSDPS----QGVQSNLVQDSHTTITSLN 169
           GYSH L L+  G +      TH + G     C S P+     G  S +     + I++  
Sbjct: 241 GYSHALALSECGSIYAWGANTHGQLGNASKQCVSSPTIINNIGRASEVAAIHLSHISAAT 300

Query: 170 SPGELYTWG 178
             G++Y WG
Sbjct: 301 ISGKVYIWG 309



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 15/90 (16%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           +TG  H+LAL++CG ++ WG +THGQLG  +A K+  S P  +  +   S V A      
Sbjct: 239 VTGYSHALALSECGSIYAWGANTHGQLG--NASKQCVSSPTIINNIGRASEVAA------ 290

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTH 90
                    L H  A    G+V+ WG   H
Sbjct: 291 -------IHLSHISAATISGKVYIWGECCH 313


>gi|337746644|ref|YP_004640806.1| BNR repeat-containing protein [Paenibacillus mucilaginosus KNP414]
 gi|336297833|gb|AEI40936.1| BNR repeat domain protein [Paenibacillus mucilaginosus KNP414]
          Length = 691

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 130/283 (45%), Gaps = 32/283 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL   G V+ WG + +G LG +      +  P +V+GL+  SVV   A +S      
Sbjct: 97  HSLALKSDGTVWAWGQNEYGVLGEDPYKTSWRLTPVQVQGLS--SVVAISANFS------ 148

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAG 123
                 H+LAL   G V+ WG +  GQLG  +      S   P +V+GL SV  V A  G
Sbjct: 149 ------HNLALKSDGTVWAWGMNNAGQLGNGTTSDMYTSFYTPSQVQGLDSVIAVAAGPG 202

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPS-------QGVQSNLVQDSHTTITSLNSPGELYT 176
            S  L L S G +       G G+  S       QG+ S +  D+  +   + S G ++ 
Sbjct: 203 TS--LALKSDGTLWAWGGLVGDGTTESRSTPVQAQGLSSVVSFDAGDSRFVVKSDGTVWA 260

Query: 177 WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
           WG N YGQ+G + + TT   P  ++ L +  +A  A    HS  L KS   ++ +G  S 
Sbjct: 261 WGWNGYGQLG-DGTTTTRYTPVPLQELSS--VAAFAADEWHSLAL-KSDGTVWEWGCNSK 316

Query: 237 VQLDSPKSVHKTPQLIHGPWIASPVAMTAG-EDSLVSHSGGLV 278
            ++     +  TP  +    ++S V + AG E SL   S G V
Sbjct: 317 GEMCYESDIRTTPVQVQD--LSSAVDIAAGFEHSLAVKSDGTV 357



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 118/297 (39%), Gaps = 74/297 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL + G V+ WG D+ G     +    S + P +VK L  V  V A        
Sbjct: 47  GRFHSLALKEDGTVWAWGKDSLG-----NGTPYSSATPVQVKDLEEVVTVAAGGN----- 96

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HSLAL   G V+ WG + +G LG +      +  P +V+GL+  SVV   A
Sbjct: 97  ---------HSLALKSDGTVWAWGQNEYGVLGEDPYKTSWRLTPVQVQGLS--SVVAISA 145

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
            +SH L L S G V                                      + WG N  
Sbjct: 146 NFSHNLALKSDGTV--------------------------------------WAWGMNNA 167

Query: 183 GQMGINNSN---TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           GQ+G   ++   T+   P +V+ L +  +  +A G   S  L KS   L+A+G    +  
Sbjct: 168 GQLGNGTTSDMYTSFYTPSQVQGLDS--VIAVAAGPGTSLAL-KSDGTLWAWG---GLVG 221

Query: 240 DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG----GDHSIVT 292
           D       TP    G  ++S V+  AG+   V  S G V    ++G    GD +  T
Sbjct: 222 DGTTESRSTPVQAQG--LSSVVSFDAGDSRFVVKSDGTVWAWGWNGYGQLGDGTTTT 276



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 91/229 (39%), Gaps = 56/229 (24%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYSHCLV 63
           H+LAL   G V+ WG +  GQLG  +      S   P +V+GL SV  V A  G S  L 
Sbjct: 149 HNLALKSDGTVWAWGMNNAGQLGNGTTSDMYTSFYTPSQVQGLDSVIAVAAGPGTSLALK 208

Query: 64  LTSTTGLWHSLA-------------------------------LNDCGEVFTWGGDTHGQ 92
              T   W  L                                +   G V+ WG + +GQ
Sbjct: 209 SDGTLWAWGGLVGDGTTESRSTPVQAQGLSSVVSFDAGDSRFVVKSDGTVWAWGWNGYGQ 268

Query: 93  LGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQG 152
           LG  +   +   +P  ++ L+SV+     A   H L L S G V     E GC S     
Sbjct: 269 LGDGTTTTRYTPVP--LQELSSVAAF--AADEWHSLALKSDGTVW----EWGCNSKGEMC 320

Query: 153 VQSNL------VQDSHTTIT---------SLNSPGELYTWGNNEYGQMG 186
            +S++      VQD  + +          ++ S G ++ WGNN YGQMG
Sbjct: 321 YESDIRTTPVQVQDLSSAVDIAAGFEHSLAVKSDGTVWAWGNNGYGQMG 369



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 19/112 (16%)

Query: 5   WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
           WHSLAL   G V+ WG ++ G++  ES     ++ P +V+ L+  S V   AG+      
Sbjct: 297 WHSLALKSDGTVWEWGCNSKGEMCYES---DIRTTPVQVQDLS--SAVDIAAGFE----- 346

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
                  HSLA+   G V+ WG + +GQ+G   A +   S P +V GL   S
Sbjct: 347 -------HSLAVKSDGTVWAWGNNGYGQMG--DAARTYHSTPIQVLGLGEPS 389



 Score = 45.1 bits (105), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 22/166 (13%)

Query: 117 VVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTIT---------S 167
           V    AG  H L L   G V    K++     P        V+D    +T         +
Sbjct: 41  VTMVAAGRFHSLALKEDGTVWAWGKDSLGNGTPYSSATPVQVKDLEEVVTVAAGGNHSLA 100

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVT-KPQRVESLVNLPIALIACGANHSFVLS-KSV 225
           L S G ++ WG NEYG +G +   T+    P +V+ L     +++A  AN S  L+ KS 
Sbjct: 101 LKSDGTVWAWGQNEYGVLGEDPYKTSWRLTPVQVQGLS----SVVAISANFSHNLALKSD 156

Query: 226 SRLYAFGIGSAVQLDSPKSVHK-----TPQLIHGPWIASPVAMTAG 266
             ++A+G+ +A QL +  +        TP  + G  + S +A+ AG
Sbjct: 157 GTVWAWGMNNAGQLGNGTTSDMYTSFYTPSQVQG--LDSVIAVAAG 200


>gi|428164909|gb|EKX33919.1| hypothetical protein GUITHDRAFT_166344 [Guillardia theta CCMP2712]
          Length = 784

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 118/239 (49%), Gaps = 37/239 (15%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G +H +ALND GEV++WG +  GQLG+    ++SQ  P +V  +  ++ V+  AG    
Sbjct: 224 AGDFHVIALNDLGEVWSWGNNVEGQLGVGDLSQRSQ--PAKVVYMDGLNTVKVAAGS--- 278

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-A 120
                    +HSL L D G+V++ G + +GQLGL   D  S+  P  +K LA+ ++   A
Sbjct: 279 ---------YHSLVLTDFGQVYSMGLNANGQLGL--GDYSSRKAPTLIKYLATKNISSIA 327

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCG----------SDPS-------QGVQSNLVQDSHT 163
           C  Y+    ++ +G V     +N  G          ++PS        G     V     
Sbjct: 328 CGDYAS-YAISDAGEVF-AWGDNSFGQLGQSAAVTYNEPSLIPSLKNDGANVYKVFGGQR 385

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
           TI +++  G +Y +GNN+YG +G+ +  TT   P ++ S V   + +IA GA H+   +
Sbjct: 386 TIFAIDESGIVYAFGNNDYGMLGLGD-KTTRKFPTKISSFVGANVYVIASGAYHTIAAT 443



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 17/153 (11%)

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
             G +H +ALND GEV++WG +  GQLG+    ++SQ  P +V  +  ++ V+  AG  H
Sbjct: 223 AAGDFHVIALNDLGEVWSWGNNVEGQLGVGDLSQRSQ--PAKVVYMDGLNTVKVAAGSYH 280

Query: 127 CLVLTSSGVVTC----THKENGCGSDPSQGVQSNLVQDSHTTITS----------LNSPG 172
            LVLT  G V       + + G G   S+   + +   +   I+S          ++  G
Sbjct: 281 SLVLTDFGQVYSMGLNANGQLGLGDYSSRKAPTLIKYLATKNISSIACGDYASYAISDAG 340

Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVN 205
           E++ WG+N +GQ+G  ++  T  +P  + SL N
Sbjct: 341 EVFAWGDNSFGQLG-QSAAVTYNEPSLIPSLKN 372



 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 117/272 (43%), Gaps = 45/272 (16%)

Query: 2   TGLWHSLALNDC----GEVFTWGGDTHGQLG-------LESADKKSQSIPKRVKGLASVS 50
            GL+HS+AL D     G V+TWG ++ GQLG       L     + ++ P+    + + S
Sbjct: 68  AGLYHSVALGDTSSTQGLVYTWGRNSKGQLGLGPIWTSLSPQAVQWKACPEPNSWVCNPS 127

Query: 51  VVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK 110
           + +     S C    S    W  L ++                  +++D +       V 
Sbjct: 128 LCKPVCDASKCTSYGSANSYWKVLGVD------------------KASDMQCMKPQDVVW 169

Query: 111 GLASV-SVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTT----- 164
           G AS   +VQ  A      VLT   ++    + +G     S  +  N +QD H       
Sbjct: 170 GSASQPQIVQTVASVDSTFVLTKQEMLA---RPDG-KYFRSVPMLINSIQDLHFLELAAG 225

Query: 165 ---ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
              + +LN  GE+++WGNN  GQ+G+ +  +  ++P +V  +  L    +A G+ HS VL
Sbjct: 226 DFHVIALNDLGEVWSWGNNVEGQLGVGDL-SQRSQPAKVVYMDGLNTVKVAAGSYHSLVL 284

Query: 222 SKSVSRLYAFGIGSAVQLD-SPKSVHKTPQLI 252
           +    ++Y+ G+ +  QL     S  K P LI
Sbjct: 285 TD-FGQVYSMGLNANGQLGLGDYSSRKAPTLI 315


>gi|114598774|ref|XP_001175007.1| PREDICTED: E3 ISG15--protein ligase HERC5-like, partial [Pan
           troglodytes]
          Length = 207

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 41/177 (23%)

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           ++  T G +HSLAL+  GE+F WG + HGQLG+      S + P+ V+ LA V + Q  A
Sbjct: 44  IIQITCGDYHSLALSKGGELFAWGQNLHGQLGV-GRKFPSTTTPQIVEHLAGVPLAQISA 102

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G +H + L+ S                                      G +Y+WG NE+
Sbjct: 103 GEAHSMALSMS--------------------------------------GNIYSWGKNEF 124

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           GQ+G+ ++ +    P  +E L N  +  +ACG +HS +L++    L+ FG G   QL
Sbjct: 125 GQLGLGHTESK-DYPSLIEGLDNQKVEFVACGGSHSALLTQD-GLLFTFGAGKHGQL 179



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 95/212 (44%), Gaps = 54/212 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL+  GE+F WG + HGQLG+      S + P+ V+ LA V + Q  AG +   
Sbjct: 50  GDYHSLALSKGGELFAWGQNLHGQLGV-GRKFPSTTTPQIVEHLAGVPLAQISAGEA--- 105

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HS+AL+  G +++WG +  GQLGL     +S+  P  ++GL +  V     
Sbjct: 106 ---------HSMALSMSGNIYSWGKNEFGQLGL--GHTESKDYPSLIEGLDNQKVEFVAC 154

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH  +LT  G+                                      L+T+G  ++
Sbjct: 155 GGSHSALLTQDGL--------------------------------------LFTFGAGKH 176

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACG 214
           GQ+G +NS     +P  V  LV   +  IACG
Sbjct: 177 GQLG-HNSTQNELRPCLVAELVEYRVTQIACG 207



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 2/89 (2%)

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
           +L+  GEL+ WG N +GQ+G+     + T PQ VE L  +P+A I+ G  HS  LS S  
Sbjct: 56  ALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMS-G 114

Query: 227 RLYAFGIGSAVQLDSPKSVHKT-PQLIHG 254
            +Y++G     QL    +  K  P LI G
Sbjct: 115 NIYSWGKNEFGQLGLGHTESKDYPSLIEG 143


>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
          Length = 1287

 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 120/273 (43%), Gaps = 52/273 (19%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HS  + + G ++TWG   +GQLG    D   Q+ PKRV+           AG    +
Sbjct: 743 GRFHSACVTEEGALYTWGRGANGQLG--HGDMTDQATPKRVE-----------AGIKDKI 789

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL----------ESADKKSQSIPKRVKGL 112
           ++    G  HS A++  G ++T GGD  GQLG           E       S  +R+   
Sbjct: 790 MVKVACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWICATHGEGCTGSGWSCQERIPTF 849

Query: 113 ASVSVVQ-------ACAGYSHCLVLTSSGVVTCTHKENGCGSDPS------------QGV 153
            S+  V+       AC G+  C  +T+ G++    K    G  PS             GV
Sbjct: 850 LSILSVRHVQFVDIAC-GHGFCAAITNRGLLYTWGKGTALGLGPSGDVSEPTHLSSIDGV 908

Query: 154 QSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTK-PQRVESLVNLPIAL-- 210
            S    D H    +L   G+LY WG++E G++G   S   VT+ P+ V +  ++  A   
Sbjct: 909 VSVACGDIHA--AALTDKGQLYMWGSSEAGRLGDGRSTEGVTRTPKLVPAFADIHQARCL 966

Query: 211 -IACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
            ++ G  H+  +S + S L    IG+A  LDSP
Sbjct: 967 GVSIGPRHALAISSTSSSLPKT-IGAA--LDSP 996



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 111/270 (41%), Gaps = 60/270 (22%)

Query: 14  GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
           G + +WG ++ G LG     +  Q  P  ++ L+SV V    AG             +HS
Sbjct: 567 GLILSWGANSDGVLGHTGGIE--QLWPLAIESLSSVQVKMVAAGE------------FHS 612

Query: 74  LALNDCGEVFTWGGDTHGQLG------LESADKKSQSIPKRV---KGLASVSVVQACAGY 124
           L L + GEV ++G +  GQ G       ES+D  + + P+ +     L   +VV   AG 
Sbjct: 613 LCLTENGEVTSFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGG 672

Query: 125 SHCLVLTSSGVVTCTHK--ENGCGSDP--------------SQGVQSNLVQDSHTTITSL 168
            H  ++T+ G +    +  E   G D               S   Q++  Q   T +++L
Sbjct: 673 YHSALVTADGELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLSAL 732

Query: 169 NS------------------PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL 210
           N                    G LYTWG    GQ+G  +     T P+RVE+ +   I +
Sbjct: 733 NGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQAT-PKRVEAGIKDKIMV 791

Query: 211 -IACGANHSFVLSKSVSRLYAFGIGSAVQL 239
            +ACG NHS  +  S   +Y  G   + QL
Sbjct: 792 KVACGENHSAAVD-SAGVIYTTGGDESGQL 820


>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
          Length = 3628

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 133/308 (43%), Gaps = 39/308 (12%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H+LAL   G+VF+WG    G+LG    +  S   PK ++ L S  +     G    
Sbjct: 2683 SGGKHALALTQDGKVFSWGEGEDGKLG--HGNCISLDKPKLIEILKSKRIRDIACGSG-- 2738

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      HS A+   GE++TWG   +G+LG    D  +Q+ PK V+ L    VVQ  
Sbjct: 2739 ----------HSAAIASNGELYTWGLGEYGRLG--HGDTITQTRPKLVQALVGQRVVQVA 2786

Query: 122  AGY--SHCLVLTSSGVVTCTHKEN--GCGSDPSQGVQSNLVQDSHTTIT----------- 166
             G   +  + LT+ G V      +    G   S G  + L  D    +            
Sbjct: 2787 CGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGAQFS 2846

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   GE++TWG  +Y ++G  N +  V KP  VE L    I  +A GA H   ++ + 
Sbjct: 2847 LALTKYGEVWTWGKGDYFRLGHGNDH-HVRKPTLVEGLRGKKIIHVAVGALHCLAVTDT- 2904

Query: 226  SRLYAFGIGS-AVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYS 284
             ++YA+G      Q +   SV++ P L+H    A    ++ G     SHS   V+    S
Sbjct: 2905 GQVYAWGDNDHGQQGNGATSVNRKPSLVHDLEDARVNRVSCGS----SHSIAWVLVDQPS 2960

Query: 285  GGDHSIVT 292
             G+   VT
Sbjct: 2961 NGNQDPVT 2968



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 121/271 (44%), Gaps = 44/271 (16%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LAL   G V++WG    G+LG    D  S   PK ++ L   ++V    G +      
Sbjct: 158 HYLALTQDGCVYSWGNGDGGRLG--HGDTVSYDEPKLIESLLDKNIVFIACGST------ 209

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-AC-AG 123
                 +S AL+  GE++TWG   +G+LG  + D      P  V  L   +VV  AC +G
Sbjct: 210 ------YSAALSASGELYTWGRGNYGRLGHGNFD--DVLTPTLVTTLKGHTVVHVACGSG 261

Query: 124 YSHCLVLTSSGVV-TCTHKENG-CGSDPSQGVQSNLVQDSHTTI------------TSLN 169
            S  L +T+SG+V +    + G  G   + G ++  + D    I             +L 
Sbjct: 262 DSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALT 321

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
           + GE+YTWG  +  ++G + S   V  P+ +ESL +  I  ++ G  H   L++    +Y
Sbjct: 322 AHGEVYTWGKGDAYRLG-HGSEEHVRYPKVIESLRDKKIKDLSVGTTHILALTED-QFVY 379

Query: 230 AFGIGSAVQLDSPKSVHKTPQLIHGPWIASP 260
            +G     Q+D        P L  GP ++ P
Sbjct: 380 GWGRNDYGQID--------PTL--GPVVSEP 400



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 54/222 (24%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G+++  G  T+G+LGL   D  +   PK +  L+   V++  A +S         G  H+
Sbjct: 2641 GKLYACGEGTNGRLGL--GDDNNVCEPKAIPFLSQF-VIKKVAVHS---------GGKHA 2688

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL   G+VF+WG    G+LG    +  S   PK ++ L S  +                
Sbjct: 2689 LALTQDGKVFSWGEGEDGKLG--HGNCISLDKPKLIEILKSKRI---------------- 2730

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
                   ++  CGS  S  + SN               GELYTWG  EYG++G +    T
Sbjct: 2731 -------RDIACGSGHSAAIASN---------------GELYTWGLGEYGRLG-HGDTIT 2767

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSR-LYAFGIG 234
             T+P+ V++LV   +  +ACG+  +  ++ +    +Y++G G
Sbjct: 2768 QTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWGDG 2809



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 29/232 (12%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  +S AL+  GE++TWG   +G+LG  + D      P  V  L   +VV    G     
Sbjct: 207 GSTYSAALSASGELYTWGRGNYGRLGHGNFD--DVLTPTLVTTLKGHTVVHVACG----- 259

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                +G   +L +   G VF+WG   +G+LG    D      PK V  L  ++VV+   
Sbjct: 260 -----SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTD--GSKTPKIVDKLLDINVVKVFC 312

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
           G      LT+ G V    K +    G GS+         + ++   ++D     T I +L
Sbjct: 313 GGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILAL 372

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                +Y WG N+YGQ+        V++P    +L +  +  +A G   SF 
Sbjct: 373 TEDQFVYGWGRNDYGQID-PTLGPVVSEPTLCPTLSSKTVIGLASGPTQSFA 423


>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
            magnipapillata]
          Length = 2284

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 123/267 (46%), Gaps = 35/267 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G  H LAL+  GEVF+WG    G+LG    ++++ S PKR++      +   CAG S  
Sbjct: 1536 SGGRHCLALSSDGEVFSWGEGEDGKLG--HGNRQTSSQPKRIEFFCGKIITNICAGGS-- 1591

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-A 120
                      HS A+   GE++TWG   +G+LG    D   Q  PK+V+ L    V+  A
Sbjct: 1592 ----------HSAAIGLNGELYTWGKGRYGRLG--HGDSDDQLKPKQVEALQFFFVLDVA 1639

Query: 121  C-AGYSHCLVLTS-SGVVTCTHKENG-CGSDPSQGVQSNLVQD--SHTTIT--------- 166
            C +G +  L +T+   V +    + G  G   S G +  ++ +  S   I          
Sbjct: 1640 CGSGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFS 1699

Query: 167  -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +L   G LYTWG  +Y ++G + +   V +P  V +L N  +  I+CG+ H  V +   
Sbjct: 1700 MALTKYGVLYTWGKGDYYRLG-HGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDE- 1757

Query: 226  SRLYAFGIGSAVQL-DSPKSVHKTPQL 251
              +Y +G     QL D      +TP L
Sbjct: 1758 GEVYCWGDNDEGQLGDGTIIARQTPTL 1784



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 29/233 (12%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HS A+   GE++TWG   +G+LG    D   Q  PK+V+ L    V+    G        
Sbjct: 1592 HSAAIGLNGELYTWGKGRYGRLG--HGDSDDQLKPKQVEALQFFFVLDVACG-------- 1641

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              +G   +L + +   V++WG   +G+LG   +D     +P  ++ L+   +V+   G  
Sbjct: 1642 --SGDAQTLCITNDDNVWSWGDGDYGKLGRGGSD--GCKVPMIIEDLSGKGIVKVECGSQ 1697

Query: 126  HCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTITSLN----------SP 171
              + LT  GV+    K +    G G++        +    +  +TS++            
Sbjct: 1698 FSMALTKYGVLYTWGKGDYYRLGHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDE 1757

Query: 172  GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
            GE+Y WG+N+ GQ+G + +      P     L+N  I  I+CG+ H+   S S
Sbjct: 1758 GEVYCWGDNDEGQLG-DGTIIARQTPTLNTFLLNKKIDRISCGSAHTIAWSTS 1809



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 57/212 (26%)

Query: 12   DCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV--VQACAGYSHCLVLTSTTG 69
            D   VF  G   +GQLGL  ++  + + P+ ++ +  +++  +   +G  HCL L+S   
Sbjct: 1492 DGALVFATGYGNNGQLGLGYSE--TVTSPRLLESIKHINIKKISVHSGGRHCLALSSD-- 1547

Query: 70   LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 129
                      GEVF+WG    G+LG    ++++ S PKR++      +   CAG      
Sbjct: 1548 ----------GEVFSWGEGEDGKLG--HGNRQTSSQPKRIEFFCGKIITNICAG------ 1589

Query: 130  LTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINN 189
                                           SH+    LN  GELYTWG   YG++G  +
Sbjct: 1590 ------------------------------GSHSAAIGLN--GELYTWGKGRYGRLGHGD 1617

Query: 190  SNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
            S+  + KP++VE+L    +  +ACG+  +  L
Sbjct: 1618 SDDQL-KPKQVEALQFFFVLDVACGSGDAQTL 1648



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 113/256 (44%), Gaps = 37/256 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS A+ +   ++TWG    G+LG    D+++   PK V      +VVQ   G     
Sbjct: 706 GSAHSAAIVENKYLYTWGLGDFGRLG--HGDEETILQPKFVTHFLGYNVVQVSCGSRDA- 762

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                     ++ + D  +V++WG    G+LG   +++    IP  V+ L  + + +   
Sbjct: 763 ---------QTVCITDDDKVWSWGDGDFGKLGRGGSER--CLIPVEVEQLRGLQICKILC 811

Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQD---SHTTITSL 168
           G    + LT +G V    K +    G G+D     P   +G++   V D         ++
Sbjct: 812 GAQFTVALTKTGTVWTWGKGDFYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGALHCLAV 871

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
              GE+++WG+N++GQ+G   ++     P  +  L N  I  +ACG++HS   ++  +  
Sbjct: 872 TQDGEVFSWGDNDHGQLGTGETDVKKV-PNLITGLHNHRIKYVACGSSHSIAWTEITT-- 928

Query: 229 YAFGIGSAVQLDSPKS 244
                 SA  +D P S
Sbjct: 929 ------SACIIDKPLS 938



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 100/250 (40%), Gaps = 55/250 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H +AL   G  F+WG   +GQLG    +  S S P  ++      V     G +      
Sbjct: 657 HVMALTSDGLAFSWGDGENGQLG--HGNLMSCSKPHLIEAFVGKIVTDISCGSA------ 708

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                 HS A+ +   ++TWG    G+LG    D+++   PK V      +VVQ      
Sbjct: 709 ------HSAAIVENKYLYTWGLGDFGRLG--HGDEETILQPKFVTHFLGYNVVQV----- 755

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CGS  +Q V              +    ++++WG+ ++G++
Sbjct: 756 ------------------SCGSRDAQTV-------------CITDDDKVWSWGDGDFGKL 784

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
           G   S   +  P  VE L  L I  I CGA  +  L+K+   ++ +G G   +L     +
Sbjct: 785 GRGGSERCLI-PVEVEQLRGLQICKILCGAQFTVALTKT-GTVWTWGKGDFYRLGHGTDI 842

Query: 246 H-KTPQLIHG 254
           H + P+L+ G
Sbjct: 843 HVRQPKLVEG 852



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 59/138 (42%), Gaps = 16/138 (11%)

Query: 1   MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
           + G   ++AL   G V+TWG     +LG  +     Q  PK V+GL    V+    G  H
Sbjct: 810 LCGAQFTVALTKTGTVWTWGKGDFYRLGHGTDIHVRQ--PKLVEGLRGKHVIDIAVGALH 867

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
           CL +T              GEVF+WG + HGQLG    D K   +P  + GL +  +   
Sbjct: 868 CLAVTQD------------GEVFSWGDNDHGQLGTGETDVK--KVPNLITGLHNHRIKYV 913

Query: 121 CAGYSHCLVLTSSGVVTC 138
             G SH +  T      C
Sbjct: 914 ACGSSHSIAWTEITTSAC 931



 Score = 50.8 bits (120), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 95/234 (40%), Gaps = 60/234 (25%)

Query: 4   LWHSLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           LW + + N   +VF WG +   QLG L+ +  KS   P     L+S+       G     
Sbjct: 549 LWEN-STNKQVDVFMWGLNDKDQLGGLKGSKVKS---PTLCDHLSSLQCKFIAGGSKSTF 604

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQA 120
            +T+             G++++ G  + G+LG+        S P+ V GL    V+ V  
Sbjct: 605 FITNK------------GKLYSCGESSFGKLGIGDITGNVTS-PRLVTGLNQLIVTKVSV 651

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
            +G +H + LTS G+                                       ++WG+ 
Sbjct: 652 HSGGNHVMALTSDGLA--------------------------------------FSWGDG 673

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
           E GQ+G  N   + +KP  +E+ V   +  I+CG+ HS  + ++   LY +G+G
Sbjct: 674 ENGQLGHGNL-MSCSKPHLIEAFVGKIVTDISCGSAHSAAIVEN-KYLYTWGLG 725


>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
          Length = 440

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 122/262 (46%), Gaps = 33/262 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LA+   GEV +WG + +GQLGL   D +   +P++++    + +    AG  H   +T
Sbjct: 131 HCLAVTMEGEVQSWGRNQNGQLGL--GDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVT 188

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                         G+++ WG   +G LGL   D+  + +P+RV       +     G+ 
Sbjct: 189 ED------------GDLYGWGWGRYGNLGL--GDRNDRLVPERVTSAGGEKMSMVACGWR 234

Query: 126 HCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTIT----------SLNSP 171
           H + ++ SG +       + + G G      V   L    ++ I+          +L S 
Sbjct: 235 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLVPHKLEALGNSVISQISGGWRHTMALTSD 294

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G+LY WG N++GQ+G+ N N     P +V    +  +  ++CG  H+  +++  + ++A+
Sbjct: 295 GKLYGWGWNKFGQVGVGN-NLDQCSPVQVRIPDDQKVVQVSCGWRHTLAVTER-NNVFAW 352

Query: 232 GIGSAVQLDSPKSVHKT-PQLI 252
           G G+  QL   +S+ +  P++I
Sbjct: 353 GRGTNGQLGIGESLDRNFPKII 374



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 128/318 (40%), Gaps = 60/318 (18%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS+AL     V +WG    GQLG    D + +  P ++  L    +V    G  H 
Sbjct: 22  AGASHSVALLSGDIVCSWGRGEDGQLG--HGDAEDRLSPTQLSALDDHQIVSVTCGADHT 79

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           +  + +             EV++WG    G+LG  ++      +P  +K L  + + Q  
Sbjct: 80  VAYSESR-----------MEVYSWGWGDFGRLGHGNSSDLFTPLP--IKALHGIRIKQIA 126

Query: 122 AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITS 167
            G SHCL +T  G V    +      G G              +G++  +V        +
Sbjct: 127 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAA 186

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           +   G+LY WG   YG +G+ + N  +  P+RV S     ++++ACG  H+  +S S + 
Sbjct: 187 VTEDGDLYGWGWGRYGNLGLGDRNDRLV-PERVTSAGGEKMSMVACGWRHTISVSYSGA- 244

Query: 228 LYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHS----GGLVVKKIY 283
           LY +G              K  QL HG            ED LV H     G  V+ +I 
Sbjct: 245 LYTYGW------------SKYGQLGHGDL----------EDHLVPHKLEALGNSVISQIS 282

Query: 284 SGGDHSIVTVTKSSDGVL 301
            G  H   T+  +SDG L
Sbjct: 283 GGWRH---TMALTSDGKL 297


>gi|159040146|ref|YP_001539399.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918981|gb|ABW00409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 555

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 111/248 (44%), Gaps = 32/248 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           +S AL   G V  WG +T G+LG        ++ P  VK L + + V A A         
Sbjct: 98  NSFALTSTGAVLAWGNNTGGELG--DGTNTDRTTPVAVK-LPTGTTVTAIA--------- 145

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G +H+LAL   G +  WGG+  G+LG  +   +++ +P  V   A  ++     G  
Sbjct: 146 --VGTFHTLALTSTGALLAWGGNGFGELGDGTTTARNEPVPVNVP--AGTTITAIAGGRG 201

Query: 126 HCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT----------SLNSP 171
           H L LTS+G V    K N    G G++ +     ++     TT+T          +L S 
Sbjct: 202 HSLALTSTGTVLAWGKNNEGQLGDGTNANSTTPVDVDLPPGTTVTAIAGGGSNSFALTSA 261

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G +  WG N  GQ+G + + T  + P  V+      +  IA G  HS  L+ S   + A+
Sbjct: 262 GTVLAWGLNSSGQVG-DGTTTDRSTPVDVDLPPGTTVTAIAGGEGHSVALT-SAGTVLAW 319

Query: 232 GIGSAVQL 239
           G+ S+ QL
Sbjct: 320 GLNSSGQL 327



 Score = 69.7 bits (169), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 125/288 (43%), Gaps = 46/288 (15%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+LAL   G +  WGG+  G+LG  +   +++ +P  V    + + + A AG     
Sbjct: 147 GTFHTLALTSTGALLAWGGNGFGELGDGTTTARNEPVPVNVP---AGTTITAIAG----- 198

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G  HSLAL   G V  WG +  GQLG       + + P  V      +V     
Sbjct: 199 ------GRGHSLALTSTGTVLAWGKNNEGQLG--DGTNANSTTPVDVDLPPGTTVTAIAG 250

Query: 123 GYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT---------- 166
           G S+   LTS+G V      +     +G  +D S  V  +L     TT+T          
Sbjct: 251 GGSNSFALTSAGTVLAWGLNSSGQVGDGTTTDRSTPVDVDLPPG--TTVTAIAGGEGHSV 308

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLP-----IALIACGANHSFVL 221
           +L S G +  WG N  GQ+G   +  + T    V+  VNLP      A+ A   +HS  L
Sbjct: 309 ALTSAGTVLAWGLNSSGQLGDGTTTDSTTP---VD--VNLPPDTTITAITAHDGSHSLAL 363

Query: 222 SKSVSRLYAFGIGSAVQL-DSPKSVHKTPQLIHGPWIASPVAMTAGED 268
           + S   + A+G+ S+ +L D   +   TP  ++ P   +  A+  G+D
Sbjct: 364 T-STGTILAWGLNSSGELGDGTTTNRSTPVDVNLPPGTTVTAIDNGDD 410


>gi|168058364|ref|XP_001781179.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667416|gb|EDQ54047.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 466

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 118/249 (47%), Gaps = 19/249 (7%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQACAGYSH 60
            G +HS+A+   GE++ WG +  GQLG    + + +   P+RV+GL SV VV A      
Sbjct: 87  AGHYHSMAVAQTGELWAWGRNLEGQLGERDGNTREKWHQPQRVRGLESVEVVSA------ 140

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                  +G+  S+A+   G ++TWG    GQLGL +    +Q+ PKRV+ L    VVQ 
Sbjct: 141 -----RGSGV-VSMAIARDGSLWTWGKSKRGQLGLGTKIMYAQT-PKRVEALVGQQVVQV 193

Query: 121 CAGYSHCLVLTSSG-VVTCTHKENGCGS---DPSQGVQSNLVQDSHTTITSLNSPGELYT 176
             G+ H L  T+ G V +  +  NG        S+  ++++ + S T I  +++      
Sbjct: 194 ALGWGHALARTAEGHVYSWGYAANGRLGFQLSDSESAETSVKKTSPTAIARVDNESIEEA 253

Query: 177 WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
                   M    S     +P R+ SL +  +  I+CG +HS  L++    L +FG  S 
Sbjct: 254 AYRQVLEDMEKEKSPVLAWEPVRINSLCSQHVTEISCGMDHSLTLNEK-GELCSFGDNSL 312

Query: 237 VQLDSPKSV 245
            QL    ++
Sbjct: 313 GQLGRSTAI 321



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 91/218 (41%), Gaps = 53/218 (24%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
           V ++G  +HG LG           P+ + GL    VV   AG+            +HS+A
Sbjct: 48  VLSFGDGSHGALGHTDCFGGDAYEPREINGLPE-DVVSVGAGH------------YHSMA 94

Query: 76  LNDCGEVFTWGGDTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQACAGYSHCLVLTSSG 134
           +   GE++ WG +  GQLG    + + +   P+RV+GL SV VV A            SG
Sbjct: 95  VAQTGELWAWGRNLEGQLGERDGNTREKWHQPQRVRGLESVEVVSA----------RGSG 144

Query: 135 VVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTV 194
           VV+                             ++   G L+TWG ++ GQ+G+       
Sbjct: 145 VVS----------------------------MAIARDGSLWTWGKSKRGQLGLGTKIMYA 176

Query: 195 TKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
             P+RVE+LV   +  +A G  H+   +     +Y++G
Sbjct: 177 QTPKRVEALVGQQVVQVALGWGHALARTAE-GHVYSWG 213



 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 99/224 (44%), Gaps = 56/224 (25%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G+ HSL LN+ GE+ ++G ++ GQLG  +A    QS         S+  V+    +   L
Sbjct: 291 GMDHSLTLNEKGELCSFGDNSLGQLGRSTAISAVQS---------SIFAVENSEDHVQGL 341

Query: 63  -----VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV 117
                VL    GL HSLA+   G +++WG +   QLG +  +++  S+P  V+ +    V
Sbjct: 342 IRGEKVLHVGAGLGHSLAVTAQGSIYSWGWNAGHQLGRD--ERQDSSLPACVEDVEG-DV 398

Query: 118 VQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTW 177
           V    G +H L LTS G                                      +L+ W
Sbjct: 399 VALVGGRAHSLALTSQG--------------------------------------QLWVW 420

Query: 178 GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
           G+ + G++G+  S      P  +ESL N  IA +ACG +HS +L
Sbjct: 421 GSGKNGRLGLG-SPADEPSPLLLESLENHCIAEVACGFDHSLIL 463



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 19/130 (14%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            GL HSLA+   G +++WG +   QLG +  +++  S+P             AC      
Sbjct: 352 AGLGHSLAVTAQGSIYSWGWNAGHQLGRD--ERQDSSLP-------------ACVEDVEG 396

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLES-ADKKSQSIPKRVKGLASVSVVQA 120
            V+    G  HSLAL   G+++ WG   +G+LGL S AD+ S   P  ++ L +  + + 
Sbjct: 397 DVVALVGGRAHSLALTSQGQLWVWGSGKNGRLGLGSPADEPS---PLLLESLENHCIAEV 453

Query: 121 CAGYSHCLVL 130
             G+ H L+L
Sbjct: 454 ACGFDHSLIL 463


>gi|395521017|ref|XP_003764618.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sarcophilus
           harrisii]
          Length = 531

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 96/230 (41%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEV+ WG +  GQ+G  S    +Q  P++V     +  V + A      
Sbjct: 136 GSHHSMALAADGEVYAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVSIA------ 187

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V+Q   
Sbjct: 188 -----CGQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPCRVAALHSVCVLQIVC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 241 GYAHTLALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N +  ++ P ++       + + AC + H+         +Y +G
Sbjct: 263 GQLGTGNKSNLLS-PAQIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 96/236 (40%), Gaps = 54/236 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L   + G V+ WG + + QLG  + ++              ++ +Q C       V+ 
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-------------GIAPIQVCTNLLIKQVIE 132

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+AL   GEV+ WG +  GQ+G  S    +Q  P++V     +  V + A   
Sbjct: 133 VACGSHHSMALAADGEVYAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVSIA--- 187

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CG   S  V  N               GE+Y WG N  GQ+
Sbjct: 188 -------------------CGQTSSMAVLDN---------------GEVYGWGYNGNGQL 213

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           G+ N+   +T P RV +L ++ +  I CG  H+  L+     LYA+G  +  QL +
Sbjct: 214 GLGNNGNQLT-PCRVAALHSVCVLQIVCGYAHTLALTDE-GLLYAWGANTYGQLGT 267



 Score = 46.2 bits (108), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 2/82 (2%)

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G +Y WG+N Y Q+G   +N  +   Q   +L+   +  +ACG++HS  L+     +YA+
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAAD-GEVYAW 152

Query: 232 GIGSAVQLDSPKSVHK-TPQLI 252
           G  +  Q+ S  + ++ TP+ +
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKV 174


>gi|342321406|gb|EGU13340.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]
          Length = 1195

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 23/211 (10%)

Query: 881  ISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCD--IRIDYFRWISGRPNGSTRDFL 938
            + AG R V+++   A    + +  +AFY+  + ++ +  +  D+  W     N  +R  L
Sbjct: 329  VRAGAR-VASLLFAANLNAQLLPLSAFYVTLIDSLGESILITDFQAW----ENRISRFSL 383

Query: 939  CNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVE 998
            C YPF+     K  LL  D   QM   + +T         +    N  L + V RD +V+
Sbjct: 384  CQYPFLLSLGVKMMLLAFDGERQM---IERTREAYRNNLSSEEAENPLLVLRVRRDRLVD 440

Query: 999  DTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDP 1058
            D++R+++ + T D KKPL++             + GEE  DAGG+R+E+ +LL +++ DP
Sbjct: 441  DSLRQISLHRT-DLKKPLRIT------------WEGEEGIDAGGLRKEWFLLLCRQLFDP 487

Query: 1059 KYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            ++GMF    ++   WF+      ++ ++++G
Sbjct: 488  QFGMFLHDPDSNLCWFNPAAIGMEDDFWMVG 518



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 50/78 (64%)

Query: 732 WFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPTLA 791
           WF+      ++  +++G + GLA+YN   +++P PLA YKK+  E + L+DL  + P+LA
Sbjct: 502 WFNPAAIGMEDDFWMVGVIVGLAVYNEATLDVPLPLATYKKLASESLTLRDLAQVQPSLA 561

Query: 792 KSLQDILDYREPDLEDVF 809
           + LQ +LDY + D+E  F
Sbjct: 562 RGLQQLLDYDKGDVEGTF 579


>gi|145334779|ref|NP_001078735.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|8978337|dbj|BAA98190.1| regulator of chromosome condensation (cell cycle regulatory
           protein) like [Arabidopsis thaliana]
 gi|332008270|gb|AED95653.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 454

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 118/231 (51%), Gaps = 30/231 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLG---LESADKKSQSIPKRVKGLASVSVVQACAGY 58
            G +HSLA+   GE++ WG +  GQLG   ++S D +S+  PKRV+GL +V+V  A   +
Sbjct: 89  AGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSRDSRSE--PKRVEGLENVNVQAA---F 143

Query: 59  SHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVV 118
           +  +V         S A+ D G ++ WG    GQLGL +   +++ +P RV+ LA+  VV
Sbjct: 144 ASGVV---------SAAIGDDGSLWVWGRSKRGQLGLGNGIIEAR-VPSRVENLAAEHVV 193

Query: 119 QACAGYSHCLVLTSSG-VVTCTHKENGCGSDPSQGVQSNLVQD-SHTTITSLNSPGELYT 176
           +   G+ H L LT  G V    +  +G   +    ++++L+   +  ++   ++ G+L  
Sbjct: 194 KVSLGWGHALALTVDGKVFGWGYVADGRVGNVGLPLEASLLDSITDGSMKGHHAAGDL-- 251

Query: 177 WGNNEYGQ------MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
             N E  +      M   N      +P  VE   N  +A IACG++HS +L
Sbjct: 252 --NLEAAEKKVVEAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLIL 300



 Score = 67.0 bits (162), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 43/159 (27%)

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLG---LESADKKSQSIPKRVKGLASVSVVQACAG 123
           + G +HSLA+   GE++ WG +  GQLG   ++S D +S+  PKRV+GL +V+V  A A 
Sbjct: 88  SAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSRDSRSE--PKRVEGLENVNVQAAFA- 144

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
                    SGVV+                             ++   G L+ WG ++ G
Sbjct: 145 ---------SGVVS----------------------------AAIGDDGSLWVWGRSKRG 167

Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
           Q+G+ N       P RVE+L    +  ++ G  H+  L+
Sbjct: 168 QLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALT 206



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 117/284 (41%), Gaps = 63/284 (22%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           S A+ D G ++ WG    GQLGL +   +++ +P RV+ LA+  VV+   G+ H L LT 
Sbjct: 149 SAAIGDDGSLWVWGRSKRGQLGLGNGIIEAR-VPSRVENLAAEHVVKVSLGWGHALALTV 207

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLG----------LESADKKSQSIPKRVKGL---- 112
                        G+VF WG    G++G          L+S    S         L    
Sbjct: 208 D------------GKVFGWGYVADGRVGNVGLPLEASLLDSITDGSMKGHHAAGDLNLEA 255

Query: 113 ASVSVVQACA-------GYSHCLVLTSSGVVTCTHK--ENGCGSDPSQGVQSNLVQDSHT 163
           A   VV+A +        +  CLV       TC  K  +  CGSD             H+
Sbjct: 256 AEKKVVEAMSKENDMPIAWEPCLVEE-----TCNEKVADIACGSD-------------HS 297

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            I  L   G L + G+N YGQ+G +  +  +      ES    PI+ IA G  HS  +  
Sbjct: 298 LI--LCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDITES----PIS-IAAGLGHSLAICN 350

Query: 224 SVSR-LYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAG 266
              R + ++G   + QL   K     P+ + G    SP +++AG
Sbjct: 351 RGERNILSWGWNRSRQLGRGKP-ENLPREVEGFDGESPASVSAG 393



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 23/134 (17%)

Query: 2   TGLWHSLALNDCGE--VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 59
            GL HSLA+ + GE  + +WG +   QLG      K +++P+ V+G    S     AG  
Sbjct: 340 AGLGHSLAICNRGERNILSWGWNRSRQLGR----GKPENLPREVEGFDGESPASVSAGRV 395

Query: 60  HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKGLASVSVV 118
           H L +T              GE + WG   +G+LGL  S+D+    + + V+G     V+
Sbjct: 396 HSLCVTEK------------GEAWVWGCGKNGRLGLGSSSDEPEPMLLEDVEGC----VL 439

Query: 119 QACAGYSHCLVLTS 132
           QA AG+ H L+L +
Sbjct: 440 QAVAGFDHSLILVA 453



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 28/153 (18%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSL L   G + + G + +GQLG    D           G+  V + ++         ++
Sbjct: 296 HSLILCHDGTLLSAGSNIYGQLGRSKQDL----------GMKPVDITES--------PIS 337

Query: 66  STTGLWHSLALNDCGE--VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG 123
              GL HSLA+ + GE  + +WG +   QLG      K +++P+ V+G    S     AG
Sbjct: 338 IAAGLGHSLAICNRGERNILSWGWNRSRQLGR----GKPENLPREVEGFDGESPASVSAG 393

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN 156
             H L +T  G         GCG +   G+ S+
Sbjct: 394 RVHSLCVTEKGEAWVW----GCGKNGRLGLGSS 422


>gi|47218906|emb|CAG05672.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 844

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 18/151 (11%)

Query: 942  PFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTI 1001
            PFI     K+  L  D RI M     ++ FY   Q   P   N +L+++V RD+I++D +
Sbjct: 416  PFILTVFNKSRGLYYDNRISMYSERRRSAFYSMTQDTEP---NPFLKLKVRRDHIIDDAL 472

Query: 1002 RELAQYTT---NDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDP 1058
             +L   +T   +D KK L +            +F GE+  D GG+ +EF  L+L+EI +P
Sbjct: 473  VQLELISTEKPSDLKKQLFI------------EFEGEQGFDEGGLSKEFFQLVLEEIFNP 520

Query: 1059 KYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              GMF   ++TR  WF+  + E++  Y LIG
Sbjct: 521  DIGMFTYDDDTRVFWFNSSSLENEAQYTLIG 551



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 3/95 (3%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKD 785
           ++TR  WF+  + E++    LIG + GLAIYN  I+++ FP+ +YKK++ +     DL D
Sbjct: 529 DDTRVFWFNSSSLENEAQYTLIGLVLGLAIYNNCILDLHFPMIVYKKLMGKKGTFSDLSD 588

Query: 786 LSPTLAKSLQDILDYR---EPDLEDVFGITFRNWY 817
             P L++SL+ +L+Y    E D+   F I+  + +
Sbjct: 589 SHPVLSRSLKSLLEYPGNVEEDMSLSFQISHTDMF 623


>gi|301112376|ref|XP_002905267.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262095597|gb|EEY53649.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 233

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 64/198 (32%), Positives = 95/198 (47%), Gaps = 35/198 (17%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+L L D G V  WG ++ GQ+   +A K+    P  V+   +V +V   AG        
Sbjct: 50  HALVLTDSGRVVAWGWNSSGQVA--AASKEMVQTPTIVEFPKAVEIVAVAAG-------- 99

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G+ HSLA++ CG V+ WG +T+GQLG+     K  + P  V   A V   +  AG++
Sbjct: 100 ---GM-HSLAVDSCGRVWAWGCNTYGQLGIGCEMDKLHT-PSLVALPADVHAQRIAAGWA 154

Query: 126 HCLVLTSSGVV-------------TCTHKE-NGCGSDPSQGVQSNLVQ----DSHTTITS 167
           H  V+ +SG +             + T  E      D  QG+ SN+VQ    + HT   +
Sbjct: 155 HSAVILTSGEIFTFGWGLYNQLGHSTTQSELQPVIVDALQGLDSNIVQVACGNWHT--AA 212

Query: 168 LNSPGELYTWGNNEYGQM 185
           L   G+LYTWG  + GQ+
Sbjct: 213 LTESGDLYTWGWGKDGQL 230



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 15/133 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLA++ CG V+ WG +T+GQLG+     K  + P  V   A V   +  AG++H  
Sbjct: 99  GGMHSLAVDSCGRVWAWGCNTYGQLGIGCEMDKLHT-PSLVALPADVHAQRIAAGWAHSA 157

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS-IPKRVKGLASVSVVQAC 121
           V+ ++            GE+FT+G   + QLG  +   + Q  I   ++GL S ++VQ  
Sbjct: 158 VILTS------------GEIFTFGWGLYNQLGHSTTQSELQPVIVDALQGLDS-NIVQVA 204

Query: 122 AGYSHCLVLTSSG 134
            G  H   LT SG
Sbjct: 205 CGNWHTAALTESG 217



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 51/183 (27%), Positives = 71/183 (38%), Gaps = 54/183 (29%)

Query: 72  HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
           H+L L D G V  WG ++ GQ+   +A K+    P  V+   +V +V   AG  H L   
Sbjct: 50  HALVLTDSGRVVAWGWNSSGQVA--AASKEMVQTPTIVEFPKAVEIVAVAAGGMHSL--- 104

Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
                                              +++S G ++ WG N YGQ+GI    
Sbjct: 105 -----------------------------------AVDSCGRVWAWGCNTYGQLGIGCEM 129

Query: 192 TTVTKPQRVESLVNLPIAL----IACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK 247
             +  P    SLV LP  +    IA G  HS V+  S   ++ FG G   QL      H 
Sbjct: 130 DKLHTP----SLVALPADVHAQRIAAGWAHSAVILTS-GEIFTFGWGLYNQLG-----HS 179

Query: 248 TPQ 250
           T Q
Sbjct: 180 TTQ 182


>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
 gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
          Length = 374

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 125/262 (47%), Gaps = 33/262 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LA+   GEV +WG + +GQLGL   D +   +P++++    + +    AG  H     
Sbjct: 120 HCLAVTMEGEVQSWGRNQNGQLGL--GDTEDSLVPQKIQAFEGIRIKMVAAGAEH----- 172

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  + A+ + G+++ WG   +G LGL   D+  + +P+RV       +     G+ 
Sbjct: 173 -------TAAVTEDGDLYGWGWGRYGNLGL--GDRTDRLVPERVTSTGGEKMSMVACGWR 223

Query: 126 HCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTIT----------SLNSP 171
           H + ++ SG +       + + G G      +   L   S++ I+          +L S 
Sbjct: 224 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD 283

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G+LY WG N++GQ+G+ N N     P +V    +  +  ++CG  H+  +++  + ++A+
Sbjct: 284 GKLYGWGWNKFGQVGVGN-NLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTER-NNVFAW 341

Query: 232 GIGSAVQLDSPKSVHKT-PQLI 252
           G G+  QL   +SV +  P++I
Sbjct: 342 GRGTNGQLGIGESVDRNFPKII 363



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 31/248 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+AL     V +WG    GQLG    D + +  P ++  L    +V    G  H  V  
Sbjct: 15  HSVALLSGDIVCSWGRGEDGQLG--HGDAEDRPSPTQLSALDGHQIVSVTCGADHT-VAY 71

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           S +G+          EV++WG    G+LG  ++      +P  +K L  + + Q   G S
Sbjct: 72  SQSGM----------EVYSWGWGDFGRLGHGNSSDLFTPLP--IKALHGIRIKQIACGDS 119

Query: 126 HCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSLNSP 171
           HCL +T  G V    +      G G              +G++  +V        ++   
Sbjct: 120 HCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED 179

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G+LY WG   YG +G+ +    +  P+RV S     ++++ACG  H+  +S S + LY +
Sbjct: 180 GDLYGWGWGRYGNLGLGDRTDRLV-PERVTSTGGEKMSMVACGWRHTISVSYSGA-LYTY 237

Query: 232 GIGSAVQL 239
           G     QL
Sbjct: 238 GWSKYGQL 245


>gi|67617767|ref|XP_667559.1| hect domain and RLD 2 [Cryptosporidium hominis TU502]
 gi|54658712|gb|EAL37335.1| hect domain and RLD 2 [Cryptosporidium hominis]
          Length = 1878

 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 110/260 (42%), Gaps = 58/260 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+D G VF WG   +G LG    +                S V+  AG +   
Sbjct: 174 GANHSLALSDSGLVFAWGIGQYGCLGTGELND-------------VYSPVKIEAGPTDKK 220

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           VL    G  HSL  N+ G+VF WG +++G+LG        +++P ++K L+   +    A
Sbjct: 221 VLHIAAGARHSLCCNEDGQVFAWGSNSNGRLG-TGGSYGMKTVPTQIKSLSQYHITLVAA 279

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH                +GC                      ++S G +YTWGN   
Sbjct: 280 GESH----------------SGC----------------------IDSFGYIYTWGNGGS 301

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           G++G + + +    P+R+E + +LP   +  GA +S  LS+S   +Y +G      +  P
Sbjct: 302 GKLG-HGTQSDCNIPRRIEGISSLPFVQLTLGAFNSMALSQS-GEVYIWGAKQHEIISLP 359

Query: 243 KSVHKTPQLI----HGPWIA 258
             +      I     GP+I+
Sbjct: 360 TKIDAFDSHICHINSGPYIS 379



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 140/318 (44%), Gaps = 36/318 (11%)

Query: 10  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL----T 65
           L + G+++ WG +T+  LGL   +    + P +V   +++ V Q   GYSH  VL    +
Sbjct: 55  LKNKGQLYAWGVNTNNVLGL-GIENGEFNFPMKVNFFSALEVFQVSCGYSHTAVLVKGIS 113

Query: 66  STTGLWHSLALNDCGEV-FTWGGDTHGQLGLESADKKSQS------IPKRVKGLASVSVV 118
             +G  +++ L D G + +T G   H + G E  DK   +      IP  V    +  + 
Sbjct: 114 EASGRVYTMGLGDRGRLGYTRG---HTEFGNEH-DKNDLNESWYTPIPCIVNFPFNAKIS 169

Query: 119 QACAGYSHCLVLTSSGVV-TCTHKENGC-GSDPSQGVQSNLVQDSHTTITSL-------- 168
           +   G +H L L+ SG+V      + GC G+     V S +  ++  T   +        
Sbjct: 170 RISCGANHSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGAR 229

Query: 169 -----NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
                N  G+++ WG+N  G++G   S    T P +++SL    I L+A G +HS  +  
Sbjct: 230 HSLCCNEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIKSLSQYHITLVAAGESHSGCID- 288

Query: 224 SVSRLYAFGIGSAVQL-DSPKSVHKTPQLIHGPWIASPVAMTAGE-DSLVSHSGGLVVKK 281
           S   +Y +G G + +L    +S    P+ I G      V +T G  +S+     G V   
Sbjct: 289 SFGYIYTWGNGGSGKLGHGTQSDCNIPRRIEGISSLPFVQLTLGAFNSMALSQSGEVY-- 346

Query: 282 IYSGGDHSIVTVTKSSDG 299
           I+    H I+++    D 
Sbjct: 347 IWGAKQHEIISLPTKIDA 364



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 114/257 (44%), Gaps = 42/257 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+L L   G +F WG + +GQLG+++  +KSQ   K    L   + ++         
Sbjct: 496 GTSHTLLLVYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPTEIKFSEP----- 550

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           +     G WHSL  +  G  F+WG    GQLG  +   ++   P  +  L +V  V    
Sbjct: 551 IRRVACGSWHSLCCDIKGNCFSWGRGDRGQLG--TGAIRNLYEPAGIVTLKNVIEVAGGE 608

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
            YS C+V      +T  +K+                      + ++NS G+L+ WG+ + 
Sbjct: 609 LYSACIV----ACITTGNKD----------------------LDTINS-GDLWIWGDGDL 641

Query: 183 GQMGINNS--NTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL- 239
           G++G+ +    + +  P+ +   +  PI  +A G++H+  L+ S   L  +G G   +L 
Sbjct: 642 GKLGLGDHVLKSCIAAPRHLN--LGTPIIKVALGSSHTLALTAS-GELITWGAGYYGRLG 698

Query: 240 -DSPKSVHKTPQLIHGP 255
            +S KS H  P  I  P
Sbjct: 699 TNSTKS-HSNPIKIRFP 714



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 15/135 (11%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HSL  N+ G+VF WG +++G+LG        +++P ++K L+   +    AG S  
Sbjct: 226 AGARHSLCCNEDGQVFAWGSNSNGRLG-TGGSYGMKTVPTQIKSLSQYHITLVAAGES-- 282

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                     HS  ++  G ++TWG    G+LG     +   +IP+R++G++S+  VQ  
Sbjct: 283 ----------HSGCIDSFGYIYTWGNGGSGKLG--HGTQSDCNIPRRIEGISSLPFVQLT 330

Query: 122 AGYSHCLVLTSSGVV 136
            G  + + L+ SG V
Sbjct: 331 LGAFNSMALSQSGEV 345



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 42/256 (16%)

Query: 54  ACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLA 113
           +  G+S     +S    +    L + G+++ WG +T+  LGL   +    + P +V   +
Sbjct: 33  SLGGHSFTRAASSLNHYFIVAKLKNKGQLYAWGVNTNNVLGL-GIENGEFNFPMKVNFFS 91

Query: 114 SVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGE 173
           ++ V Q   GYSH  VL   G+   + +    G                     L   G 
Sbjct: 92  ALEVFQVSCGYSHTAVLV-KGISEASGRVYTMG---------------------LGDRGR 129

Query: 174 L-YTWGNNEYG-QMGINNSNTTVTKPQRVESLVNLP----IALIACGANHSFVLSKSVSR 227
           L YT G+ E+G +   N+ N +   P  +  +VN P    I+ I+CGANHS  LS S   
Sbjct: 130 LGYTRGHTEFGNEHDKNDLNESWYTP--IPCIVNFPFNAKISRISCGANHSLALSDS-GL 186

Query: 228 LYAFGIGSAVQLDSPK--SVHKTPQLIHGPWIASPVAMTAG--------EDSLVSHSGGL 277
           ++A+GIG    L + +   V+   ++  GP     + + AG        ED  V   G  
Sbjct: 187 VFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHSLCCNEDGQVFAWGSN 246

Query: 278 VVKKIYSGGDHSIVTV 293
              ++ +GG + + TV
Sbjct: 247 SNGRLGTGGSYGMKTV 262



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 96/249 (38%), Gaps = 50/249 (20%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G ++S+AL+  GEV+ WG   H  + L +   K  +    +  + S   +       H +
Sbjct: 332 GAFNSMALSQSGEVYIWGAKQHEIISLPT---KIDAFDSHICHINSGPYISFAMDVRHNI 388

Query: 63  VLTSTTGLWHSL---ALNDCGEVF------------------TWGGDTHGQLGLESADKK 101
            L +   L +S    ALN   E                     +  D    +G    D K
Sbjct: 389 YLWNNRLLVNSKKSEALNANEEQLYKRMNSKNPVLLPFFQSKAFVDDCIFYMGFNLVDYK 448

Query: 102 SQSI---PKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
              +   PK   GL SV+ +    G S    L  S + + + ++  CG+           
Sbjct: 449 GNKVSYEPKSEGGLFSVNRIYKSNGSSEIGSLVGSQIPSWSVRQIACGT----------- 497

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVN--------LPIAL 210
             SHT +  L   G ++ WG+N+YGQ+GI+          + ES +N         PI  
Sbjct: 498 --SHTLL--LVYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPTEIKFSEPIRR 553

Query: 211 IACGANHSF 219
           +ACG+ HS 
Sbjct: 554 VACGSWHSL 562



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 46/209 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKR--VKGLASVSVVQACAGYSH 60
           G  H+LAL   GE+ TWG   +G+LG  S    S  I  R  +KG+  V +         
Sbjct: 673 GSSHTLALTASGELITWGAGYYGRLGTNSTKSHSNPIKIRFPIKGVQIVDI--------- 723

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK---GLASVSV 117
                   G +HS+A++  G+++ WG     +  L   D  +  I  +++   G+  +  
Sbjct: 724 ------AVGSYHSMAVSSLGDLWVWG---KAENVLSEKDVLTPYIFAKLESPSGIPRIYS 774

Query: 118 VQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITS---------- 167
           + A    S+   +T SGV+     EN   ++  QG+++++   SHT              
Sbjct: 775 IHAFGDVSYA--ITQSGVLWIWGPEN-SETENIQGLETSIKIKSHTGRAEMIVLPGNAIG 831

Query: 168 ----------LNSPGELYTWGNNEYGQMG 186
                     L + GE+ +WG+   G++G
Sbjct: 832 VSGSTTHHVCLLASGEVVSWGDPSRGKLG 860


>gi|115485835|ref|NP_001068061.1| Os11g0545800 [Oryza sativa Japonica Group]
 gi|113645283|dbj|BAF28424.1| Os11g0545800, partial [Oryza sativa Japonica Group]
          Length = 400

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 116/269 (43%), Gaps = 37/269 (13%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS A+   G++F WG ++ GQLGL     K  S P++V  LA   V     G        
Sbjct: 111 HSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSE------ 164

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLG-------LESADKKSQSIPKRVKGLASVSVV 118
                 HS+A  + GEV +WG    G+LG       L  +   S+  P+ +K L  V + 
Sbjct: 165 ------HSIATTEEGEVLSWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIK 218

Query: 119 QACAGYSHCLVLTSSGV--VTCTHKENGCGSDPSQGVQSNLVQDS-----------HTTI 165
           +  AG  H   +   G   +     E G G    + ++  +V++            HT +
Sbjct: 219 RIAAGMLHSACIDEKGTLFIFGQKTEKGFGRSGDE-LRPTVVEEVPFSEEVACGGYHTCV 277

Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
             +   G+LY+WG+NE G +G+  ++   +      SL   P++ ++CG  H+ V+S   
Sbjct: 278 --VTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVISG-- 333

Query: 226 SRLYAFGIGSAVQLDSPKSVHKTPQLIHG 254
             +Y +G G A      +      QL HG
Sbjct: 334 GDIYTWGWGGANGTFFEEGHSSGGQLGHG 362



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 55/127 (43%), Gaps = 14/127 (11%)

Query: 10  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTG 69
           L + G VF  G +  GQLG+ S+   S   P  V G     VV+  AG  H   +T+   
Sbjct: 63  LTESGRVFAAGLNDFGQLGIGSSVTHSLE-PIEVSGFDE-KVVEVSAGNHHSCAVTAD-- 118

Query: 70  LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 129
                     G++F WG ++ GQLGL     K  S P++V  LA   V     G  H + 
Sbjct: 119 ----------GKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIA 168

Query: 130 LTSSGVV 136
            T  G V
Sbjct: 169 TTEEGEV 175


>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
 gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
          Length = 4253

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 56/232 (24%)

Query: 2    TGL-WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
            TGL  HSLAL + GEVF+WG   +G+LG  ++++  Q  P++++ L    V+    G+ H
Sbjct: 3498 TGLEGHSLALTETGEVFSWGDGDYGKLGHGNSER--QRRPRQIEALRGEDVLHVACGHKH 3555

Query: 61   CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
              ++T              G++FT+G    G+LGL +   K   +P +V  L  + V   
Sbjct: 3556 SAIVTVD------------GKLFTFGASDLGRLGLGNTSNK--KLPAQVTALQPIMVELI 3601

Query: 121  CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
              G +H +V+T       T +E+                              ++T+G  
Sbjct: 3602 ACGANHTVVVT-------TDRES------------------------------VWTFGEG 3624

Query: 181  EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
            EYGQ+G+  +   +T PQ V++   L I  I CGA  +  L+K   ++Y+ G
Sbjct: 3625 EYGQLGLGRTTAKMT-PQYVDAFSKLNIKKICCGARFTLALTKE-GKVYSCG 3674



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 113/240 (47%), Gaps = 53/240 (22%)

Query: 14   GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
            G V   G  ++G+LG  ++D            L  +  + A  G+    + TST    HS
Sbjct: 3456 GTVLACGEGSYGRLGQGNSDD-----------LPRLRPITALQGFVVTELATSTGLEGHS 3504

Query: 74   LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
            LAL + GEVF+WG   +G+LG  ++++  Q  P++++ L    V+               
Sbjct: 3505 LALTETGEVFSWGDGDYGKLGHGNSER--QRRPRQIEALRGEDVLH-------------- 3548

Query: 134  GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
              V C HK                    H+ I +++  G+L+T+G ++ G++G+ N++  
Sbjct: 3549 --VACGHK--------------------HSAIVTVD--GKLFTFGASDLGRLGLGNTSNK 3584

Query: 194  VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
               P +V +L  + + LIACGANH+ V++     ++ FG G   QL   ++  K TPQ +
Sbjct: 3585 -KLPAQVTALQPIMVELIACGANHTVVVTTDRESVWTFGEGEYGQLGLGRTTAKMTPQYV 3643



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 102/239 (42%), Gaps = 46/239 (19%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS A+   G ++TWG   +G+LG    D  S+SIP  VK +  V  V +C G S  +
Sbjct: 530 GYRHSAAITSEGLLYTWGDGDYGRLG--HGDNHSRSIPTLVKDITGVGSV-SC-GSSFTV 585

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           V++            D   V+++G   +G+LG    D      PK +  L  + + + C 
Sbjct: 586 VIS-----------QDATTVWSFGAGDNGKLG--HGDTSRVYRPKVISNLQGLLIRKVCC 632

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQG---------VQSNL------------VQDS 161
                L LTS G V         GS P  G         V   L            V D+
Sbjct: 633 ASQSSLALTSIGQVFV------WGSGPCLGYGQADATFLVPKRLDEFQDLQIIDIAVGDN 686

Query: 162 HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
           H    +L    ++Y+WGNN  GQ G+ N+N+ V  P++V    N  I  I+ G +HS  
Sbjct: 687 HCL--ALTCDNDVYSWGNNASGQCGLGNNNSPVLLPRKVTGFDNHVIYQISVGTSHSIA 743



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 112/247 (45%), Gaps = 33/247 (13%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVV-QACAGYSHCLVL 64
           H+LA+   G +++WG   +G+LG    +  +Q  PK + G     VV Q   GY H   +
Sbjct: 480 HTLAIASDGRIYSWGDGDYGKLG--HGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAI 537

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
           TS             G ++TWG   +G+LG    D  S+SIP  VK +  V  V   + +
Sbjct: 538 TSE------------GLLYTWGDGDYGRLG--HGDNHSRSIPTLVKDITGVGSVSCGSSF 583

Query: 125 SHCLVLTSSGVVTCTHKENG--CGSDPS-----------QGVQSNLVQDSHTTITSLNSP 171
           +  +   ++ V +    +NG     D S           QG+    V  +  +  +L S 
Sbjct: 584 TVVISQDATTVWSFGAGDNGKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLALTSI 643

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G+++ WG+     +G   ++ T   P+R++   +L I  IA G NH   L+   + +Y++
Sbjct: 644 GQVFVWGSGPC--LGYGQADATFLVPKRLDEFQDLQIIDIAVGDNHCLALTCD-NDVYSW 700

Query: 232 GIGSAVQ 238
           G  ++ Q
Sbjct: 701 GNNASGQ 707



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/269 (21%), Positives = 112/269 (41%), Gaps = 73/269 (27%)

Query: 24  HGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVF 83
           +G+LGL   D  +Q+ PK ++      +           +++S     H+LA+   G ++
Sbjct: 443 YGRLGL--GDSSNQNRPKLIRFEHECKIKN---------LVSSKGSDGHTLAIASDGRIY 491

Query: 84  TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVV-QACAGYSHCLVLTSSGVVTCTHKE 142
           +WG   +G+LG    +  +Q  PK + G     VV Q   GY H   +TS G+       
Sbjct: 492 SWGDGDYGKLG--HGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGL------- 542

Query: 143 NGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVES 202
                                          LYTWG+ +YG++G +  N + + P  V+ 
Sbjct: 543 -------------------------------LYTWGDGDYGRLG-HGDNHSRSIPTLVKD 570

Query: 203 LVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVA 262
           +    +  ++CG++ + V+S+  + +++FG G     D+ K  H     ++ P       
Sbjct: 571 ITG--VGSVSCGSSFTVVISQDATTVWSFGAG-----DNGKLGHGDTSRVYRP------- 616

Query: 263 MTAGEDSLVSHSGGLVVKKIYSGGDHSIV 291
                  ++S+  GL+++K+      S+ 
Sbjct: 617 ------KVISNLQGLLIRKVCCASQSSLA 639



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 16/126 (12%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           SLAL   G+VF WG      LG   AD  +  +PKR+     + ++    G +HCL LT 
Sbjct: 637 SLALTSIGQVFVWGSGPC--LGYGQADA-TFLVPKRLDEFQDLQIIDIAVGDNHCLALTC 693

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
                         +V++WG +  GQ GL + +     +P++V G  +  + Q   G SH
Sbjct: 694 DN------------DVYSWGNNASGQCGLGN-NNSPVLLPRKVTGFDNHVIYQISVGTSH 740

Query: 127 CLVLTS 132
            +  T+
Sbjct: 741 SIAWTA 746



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 23/133 (17%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G   +LAL   G+V++ G +    +  E   + +   P++V  L+   +    AGY H L
Sbjct: 3657 GARFTLALTKEGKVYSCGHNRCNGI-FEVDTQHADYYPQQVMALSEQFIEDIAAGYEHAL 3715

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKR----VKGLASVSVV 118
             LT              G+V++WG DT GQLGL       Q++P+R    +  L    + 
Sbjct: 3716 ALTKE------------GDVWSWGNDTDGQLGL------GQTLPQREPCLISSLQGKGIR 3757

Query: 119  QACAGYSHCLVLT 131
            Q  AG++H    T
Sbjct: 3758 QISAGHNHSAAWT 3770


>gi|66358878|ref|XP_626617.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
 gi|46228329|gb|EAK89228.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
          Length = 1878

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 110/260 (42%), Gaps = 58/260 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+D G VF WG   +G LG    +                S V+  AG +   
Sbjct: 174 GANHSLALSDSGLVFAWGIGQYGCLGTGELND-------------VYSPVKIEAGPTDKK 220

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           VL    G  HSL  N+ G+VF WG +++G+LG        +++P ++K L+   +    A
Sbjct: 221 VLHIAAGARHSLCCNEDGQVFAWGSNSNGRLG-TGGSYGMKTVPTQIKSLSQYHITLVAA 279

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G SH                +GC                      ++S G +YTWGN   
Sbjct: 280 GESH----------------SGC----------------------IDSFGYIYTWGNGGS 301

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           G++G + + +    P+R+E + +LP   +  GA +S  LS+S   +Y +G      +  P
Sbjct: 302 GKLG-HGTQSDCNIPRRIEGISSLPFVQLTLGAFNSMALSQS-GEVYIWGAKQHEIISLP 359

Query: 243 KSVHKTPQLI----HGPWIA 258
             +      I     GP+I+
Sbjct: 360 TKIDAFDSHICHINSGPYIS 379



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 42/257 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  H+L L   G +F WG + +GQLG+++  +KSQ+  K    L   + ++         
Sbjct: 496 GTSHTLLLVYGGTIFAWGDNKYGQLGVDTRRRKSQNGDKNESFLNEPTEIKFSEP----- 550

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
           +     G WHSL  +  G  F+WG    GQLG  +   ++   P  +  L +V  V    
Sbjct: 551 IRRVACGSWHSLCCDIKGNCFSWGRGDRGQLG--TGAIRNLYEPAGIVTLKNVIEVAGGE 608

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
            YS C+V      +T  +K+                      + ++NS G+L+ WG+ + 
Sbjct: 609 LYSACIV----ACITTGNKD----------------------LDTINS-GDLWIWGDGDL 641

Query: 183 GQMGINNS--NTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL- 239
           G++G+ +    + +  P+ +   +  PI  +A G++H+ VL+ S   L  +G G   +L 
Sbjct: 642 GKLGLGDHVLKSCIAAPRHLN--LGTPIIKVALGSSHTLVLTAS-GELITWGAGYYGRLG 698

Query: 240 -DSPKSVHKTPQLIHGP 255
            +S KS H  P  I  P
Sbjct: 699 TNSTKS-HSNPIKIRFP 714



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 138/316 (43%), Gaps = 32/316 (10%)

Query: 10  LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL----T 65
           L + G+++ WG +T+  LGL   +    + P +V   +++ V Q   GYSH  VL    +
Sbjct: 55  LKNKGQLYAWGVNTNNVLGL-GIENGEFNFPMKVNFFSALEVFQVSCGYSHTAVLVKGIS 113

Query: 66  STTGLWHSLALNDCGEV-----FTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
             +G  +++ L D G +     +T  G+ H +  L   +     +P  V    +  + + 
Sbjct: 114 EASGRVYTMGLGDRGRLGYTRGYTEFGNEHDKNDLN--ESWYTPVPCIVNFPFNAKISRI 171

Query: 121 CAGYSHCLVLTSSGVV-TCTHKENGC-GSDPSQGVQSNLVQDSHTTITSL---------- 168
             G +H L L+ SG+V      + GC G+     V S +  ++  T   +          
Sbjct: 172 SCGANHSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHS 231

Query: 169 ---NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
              N  G+++ WG+N  G++G   S    T P +++SL    I L+A G +HS  +  S 
Sbjct: 232 LCCNEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIKSLSQYHITLVAAGESHSGCID-SF 290

Query: 226 SRLYAFGIGSAVQL-DSPKSVHKTPQLIHGPWIASPVAMTAGE-DSLVSHSGGLVVKKIY 283
             +Y +G G + +L    +S    P+ I G      V +T G  +S+     G V   I+
Sbjct: 291 GYIYTWGNGGSGKLGHGTQSDCNIPRRIEGISSLPFVQLTLGAFNSMALSQSGEVY--IW 348

Query: 284 SGGDHSIVTVTKSSDG 299
               H I+++    D 
Sbjct: 349 GAKQHEIISLPTKIDA 364



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 15/135 (11%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HSL  N+ G+VF WG +++G+LG        +++P ++K L+   +    AG S  
Sbjct: 226 AGARHSLCCNEDGQVFAWGSNSNGRLG-TGGSYGMKTVPTQIKSLSQYHITLVAAGES-- 282

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                     HS  ++  G ++TWG    G+LG     +   +IP+R++G++S+  VQ  
Sbjct: 283 ----------HSGCIDSFGYIYTWGNGGSGKLG--HGTQSDCNIPRRIEGISSLPFVQLT 330

Query: 122 AGYSHCLVLTSSGVV 136
            G  + + L+ SG V
Sbjct: 331 LGAFNSMALSQSGEV 345



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 42/256 (16%)

Query: 54  ACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLA 113
           +  G+S     +S    +    L + G+++ WG +T+  LGL   +    + P +V   +
Sbjct: 33  SLGGHSFTRAASSLNHYFIVAKLKNKGQLYAWGVNTNNVLGL-GIENGEFNFPMKVNFFS 91

Query: 114 SVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGE 173
           ++ V Q   GYSH  VL   G+   + +    G                     L   G 
Sbjct: 92  ALEVFQVSCGYSHTAVLV-KGISEASGRVYTMG---------------------LGDRGR 129

Query: 174 L-YTWGNNEYG-QMGINNSNTTVTKPQRVESLVNLP----IALIACGANHSFVLSKSVSR 227
           L YT G  E+G +   N+ N +   P  V  +VN P    I+ I+CGANHS  LS S   
Sbjct: 130 LGYTRGYTEFGNEHDKNDLNESWYTP--VPCIVNFPFNAKISRISCGANHSLALSDS-GL 186

Query: 228 LYAFGIGSAVQLDSPK--SVHKTPQLIHGPWIASPVAMTAG--------EDSLVSHSGGL 277
           ++A+GIG    L + +   V+   ++  GP     + + AG        ED  V   G  
Sbjct: 187 VFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHSLCCNEDGQVFAWGSN 246

Query: 278 VVKKIYSGGDHSIVTV 293
              ++ +GG + + TV
Sbjct: 247 SNGRLGTGGSYGMKTV 262



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 96/249 (38%), Gaps = 50/249 (20%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G ++S+AL+  GEV+ WG   H  + L +   K  +    +  + S   +       H +
Sbjct: 332 GAFNSMALSQSGEVYIWGAKQHEIISLPT---KIDAFDSHICHINSGPYISFAMDVRHNI 388

Query: 63  VLTSTTGLWHSL---ALNDCGEVF------------------TWGGDTHGQLGLESADKK 101
            L +   L +S    ALN   E                     +  D    +G    D K
Sbjct: 389 YLWNNRLLVNSKKSEALNASEEQLYKRMNSKNPVLLPFFQSKAFVDDCIFYMGFNLVDYK 448

Query: 102 SQSI---PKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
              +   PK   GL SV+ +    G S    L  S + + + ++  CG+           
Sbjct: 449 GNKVSYEPKSEGGLFSVNRIYKSNGSSEIGSLVGSQIPSWSVRQIACGT----------- 497

Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVN--------LPIAL 210
             SHT +  L   G ++ WG+N+YGQ+G++          + ES +N         PI  
Sbjct: 498 --SHTLL--LVYGGTIFAWGDNKYGQLGVDTRRRKSQNGDKNESFLNEPTEIKFSEPIRR 553

Query: 211 IACGANHSF 219
           +ACG+ HS 
Sbjct: 554 VACGSWHSL 562



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 46/209 (22%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKR--VKGLASVSVVQACAGYSH 60
           G  H+L L   GE+ TWG   +G+LG  S    S  I  R  +KG+  V +         
Sbjct: 673 GSSHTLVLTASGELITWGAGYYGRLGTNSTKSHSNPIKIRFPIKGVQIVDI--------- 723

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK---GLASVSV 117
                   G +HS+A++  G+++ WG     +  L   D  +  I  +++   G+  +  
Sbjct: 724 ------AVGSYHSMAVSSLGDLWVWG---KAENVLSEKDVLTPYIFAKLESPSGVPRIYS 774

Query: 118 VQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITS---------- 167
           + A    S+   +T SGV+     EN   ++  QG++S++   SHT              
Sbjct: 775 IHAFGDVSYA--ITQSGVLWIWGPEN-SETENIQGLESSIKIKSHTGRAEMILLPGNAIG 831

Query: 168 ----------LNSPGELYTWGNNEYGQMG 186
                     L + GE+ +WG+   G++G
Sbjct: 832 VSGSTTHHVCLLASGEVVSWGDPSRGKLG 860


>gi|427797227|gb|JAA64065.1| Putative alpha-tubulin suppressor, partial [Rhipicephalus
           pulchellus]
          Length = 606

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 99/230 (43%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL   G+V+ WG +  GQ+G  S    +Q  P++V          +  G   C+
Sbjct: 211 GSHHSLALTTNGDVYAWGQNNCGQVG--SGSTTNQPTPRKVS---------SGIGGRRCI 259

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +    G   S+A+ + GEVF WG + +GQLGL   +  +Q+ P RV  L  V + +   
Sbjct: 260 GVA--CGQTSSMAVMENGEVFGWGYNGNGQLGL--GNNVNQTSPCRVTNLQGVVIHKVVC 315

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H + L+  GV                                      LYTWG N Y
Sbjct: 316 GYAHTMALSDEGV--------------------------------------LYTWGANSY 337

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N    V+ P ++ + +   + + A   NH   +    SR+Y +G
Sbjct: 338 GQLGTGNKANQVS-PFKMPTDIGRIVEIAASHYNHISAVMTQTSRVYMWG 386



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 53/89 (59%), Gaps = 3/89 (3%)

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
           + ++   GEL +WG+N Y Q+G NN NT    P  + + ++  +A +ACG++HS  L+ +
Sbjct: 163 VLAVTESGELLSWGHNGYCQLG-NNCNTQGLVPSSISAGLSHRVAQVACGSHHSLALTTN 221

Query: 225 VSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
              +YA+G  +  Q+ S  + ++ TP+ +
Sbjct: 222 -GDVYAWGQNNCGQVGSGSTTNQPTPRKV 249


>gi|300797458|ref|NP_001178766.1| ubiquitin-protein ligase E3A [Rattus norvegicus]
          Length = 868

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 75/151 (49%), Gaps = 18/151 (11%)

Query: 942  PFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTI 1001
            PFI +A  K   L  D RI+M      T  Y  +Q      LN YL ++V RD+I++D +
Sbjct: 474  PFILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQG---QQLNPYLRLKVRRDHIIDDAL 530

Query: 1002 REL---AQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDP 1058
              L   A     D KK L             V+F GE+  D GGV +EF  L+++EI +P
Sbjct: 531  VRLEMIAMENPADLKKQL------------YVEFEGEQGVDEGGVSKEFFQLVVEEIFNP 578

Query: 1059 KYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              GMF   E TR  WF+  +FE +  + LIG
Sbjct: 579  DIGMFTYDEATRLFWFNPSSFETEGQFTLIG 609



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 61/95 (64%), Gaps = 2/95 (2%)

Query: 721 GITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPIL 779
           G+  Y+E TR  WF+  +FE +    LIG + GLAIYN  I+++ FP+ +Y+K++ +   
Sbjct: 581 GMFTYDEATRLFWFNPSSFETEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGT 640

Query: 780 LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
             DL D  P L +SL+D+L+Y E ++ED   ITF+
Sbjct: 641 FCDLGDSHPILYQSLKDLLEY-EGNVEDDMMITFQ 674


>gi|326427655|gb|EGD73225.1| ubiquitin protein ligase E3A [Salpingoeca sp. ATCC 50818]
          Length = 996

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 73/152 (48%), Gaps = 23/152 (15%)

Query: 937  FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNI 996
            F  + P++    AK  L   +  +    A            F      Q L + V RD +
Sbjct: 602  FSRSAPYVLSVDAKAQLFSQETTMLQNRAARAI--------FGAGMFRQSLNISVHRDTL 653

Query: 997  VEDTIRELAQYTTND---FKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLK 1053
            V DTI +L+    +D    K+PL++            KFRGE+  D GG+++EF  LL++
Sbjct: 654  VRDTITQLSSLQISDPDALKRPLRI------------KFRGEQGLDEGGLKKEFFQLLIR 701

Query: 1054 EILDPKYGMFKEYEETRSIWFSEDTFEDQNMY 1085
            E+ DPKYGMF  +EETR  +FS  + E  + Y
Sbjct: 702  ELFDPKYGMFVYHEETRFFYFSTSSLEAPDEY 733



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 4/101 (3%)

Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
           PK G+  Y    +EETR  +FS  + E  +   L+G L GLA+YN  I+++ FP  +YKK
Sbjct: 706 PKYGMFVY----HEETRFFYFSTSSLEAPDEYRLLGMLLGLAMYNRVILDVHFPFVVYKK 761

Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +  E + L+DL + +P LA+ L+ +LDY   D+EDVF  TF
Sbjct: 762 LRGEAVGLEDLAEFNPELARGLKQLLDYPGDDVEDVFCRTF 802


>gi|408681156|ref|YP_006880983.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
           10712]
 gi|328885485|emb|CCA58724.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
           10712]
          Length = 408

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 125/263 (47%), Gaps = 46/263 (17%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LAL+  G+V++WG +++GQLG  +    S+++P RV+G+  V  + A   +       
Sbjct: 143 HALALDTSGQVYSWGDNSYGQLG-NNRTGDSRTVPDRVQGMPKVKQISAGCDF------- 194

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL + G+V+ WG   HGQLG  + ++ + S+P++V+GL   ++V+  AG  
Sbjct: 195 -------SLALLENGKVYAWGRGIHGQLG--TGNRATSSVPRQVQGLE--NIVEIDAGCY 243

Query: 126 HCLVLTSSGVVTC----THKENGCGSDPS----------QGVQSNLVQDSHTTITSLNSP 171
           H L LT+   V       + + G  S  S          +GV        H  + + +S 
Sbjct: 244 HALALTADDTVKSWGYNLYGQLGNSSTKSSTLPVDVDWIEGVSDIEAGAFHNYVKTSDS- 302

Query: 172 GELYTWGNNEYGQM-------GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
             ++ WGNN+YGQ+         N S T  T P  +  L    +  +A GA H   +  +
Sbjct: 303 -HVWGWGNNQYGQLLESDEAFDANVSRTNRTAPVEIPRLEG--VQHLAAGARHGVAV--T 357

Query: 225 VSRLYAFGIGSAVQLDSPKSVHK 247
              ++ +G     QL +  +V +
Sbjct: 358 ADDVFTWGHNGEGQLGNGTTVAR 380



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 117/243 (48%), Gaps = 59/243 (24%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           SLAL + G+V+ WG   HGQLG  + ++ + S+P++V+GL ++  + A            
Sbjct: 195 SLALLENGKVYAWGRGIHGQLG--TGNRATSSVPRQVQGLENIVEIDA------------ 240

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
             G +H+LAL     V +WG + +GQLG  S   KS ++P  V  +  VS ++A  G  H
Sbjct: 241 --GCYHALALTADDTVKSWGYNLYGQLGNSST--KSSTLPVDVDWIEGVSDIEA--GAFH 294

Query: 127 CLVLTSSGVVTCTHKENGCGSDP-SQGVQSNLVQDSHTTITSLNSPGEL----------- 174
             V TS   V       G G++   Q ++S+   D++ + T+  +P E+           
Sbjct: 295 NYVKTSDSHVW------GWGNNQYGQLLESDEAFDANVSRTNRTAPVEIPRLEGVQHLAA 348

Query: 175 -------------YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIAL----IACGANH 217
                        +TWG+N  GQ+G   + TTV + + V+ ++N   A+    ++ G N 
Sbjct: 349 GARHGVAVTADDVFTWGHNGEGQLG---NGTTVARYESVK-ILNEGSAIKNVAVSLGGNT 404

Query: 218 SFV 220
           ++ 
Sbjct: 405 TYA 407



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 60/242 (24%)

Query: 16  VFTWGGDTHGQLGLES-ADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
           V +WG    GQLG  + +D  S   P  V  L    V Q  AG +             S 
Sbjct: 47  VLSWGAGRTGQLGNGTLSDSLS---PSSVTSLFRGDVDQMSAGGTSSA---------DSF 94

Query: 75  ALNDCGE-VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
           AL    + V +WG ++ GQLG  +    +Q++P  V  L  +  V   AG  H L L +S
Sbjct: 95  ALARTDKTVKSWGHNSSGQLG--NGGNTNQTVPTTVPRLTDIKDV--AAGGKHALALDTS 150

Query: 134 GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
           G                                      ++Y+WG+N YGQ+G N +  +
Sbjct: 151 G--------------------------------------QVYSWGDNSYGQLGNNRTGDS 172

Query: 194 VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP-KSVHKTPQLI 252
            T P RV+ +    +  I+ G + S  L ++  ++YA+G G   QL +  ++    P+ +
Sbjct: 173 RTVPDRVQGMP--KVKQISAGCDFSLALLEN-GKVYAWGRGIHGQLGTGNRATSSVPRQV 229

Query: 253 HG 254
            G
Sbjct: 230 QG 231



 Score = 44.3 bits (103), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 26/149 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+LAL     V +WG + +GQLG  S   KS ++P  V  +  VS ++  AG  H  
Sbjct: 241 GCYHALALTADDTVKSWGYNLYGQLGNSST--KSSTLPVDVDWIEGVSDIE--AGAFHNY 296

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD-------KKSQSIPKRVKGLASV 115
           V TS + +W             WG + +GQL LES +       + +++ P  +  L  V
Sbjct: 297 VKTSDSHVW------------GWGNNQYGQL-LESDEAFDANVSRTNRTAPVEIPRLEGV 343

Query: 116 SVVQACAGYSHCLVLTSSGVVTCTHKENG 144
             +   AG  H + +T+  V T  H   G
Sbjct: 344 QHL--AAGARHGVAVTADDVFTWGHNGEG 370


>gi|403303318|ref|XP_003942281.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Saimiri
           boliviensis boliviensis]
          Length = 531

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 95/234 (40%), Gaps = 62/234 (26%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V               ++CL
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKV---------------TNCL 178

Query: 63  ----VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVV 118
               V+    G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V 
Sbjct: 179 HFKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVN 236

Query: 119 QACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWG 178
           Q   GY+H L LT  G+                                      LY WG
Sbjct: 237 QIVCGYAHTLALTDEGL--------------------------------------LYAWG 258

Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
            N YGQ+G  N N  +  P  +       + + AC + H+         +Y +G
Sbjct: 259 ANTYGQLGTGNKNNLLN-PAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 94/236 (39%), Gaps = 54/236 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L   + G V+ WG + + QLG  + ++              V+ +Q C       V+ 
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-------------GVAPIQVCTNLLIKKVVE 132

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+AL   GEVF WG +  GQ+G  S    +Q  P++V        V   A   
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHFKRVVGIA--- 187

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CG   S  V  N               GE+Y WG N  GQ+
Sbjct: 188 -------------------CGQTSSMAVLDN---------------GEVYGWGYNGNGQL 213

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           G+ N+   +T P RV +L ++ +  I CG  H+  L+     LYA+G  +  QL +
Sbjct: 214 GLGNNGNQLT-PVRVAALHSVCVNQIVCGYAHTLALTDE-GLLYAWGANTYGQLGT 267



 Score = 49.3 bits (116), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 43/182 (23%)

Query: 73  SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLT 131
           +L + D  EVF +G +    LG  + D +S  +PK+++GL    +     G   H L+ T
Sbjct: 34  ALYVTDDDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLST 91

Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
             GVV                                      Y WG+N Y Q+G   +N
Sbjct: 92  EDGVV--------------------------------------YAWGHNGYSQLGNGTTN 113

Query: 192 TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQ 250
             V   Q   +L+   +  +ACG++HS  L+     ++A+G  +  Q+ S  + ++ TP+
Sbjct: 114 QGVAPIQVCTNLLIKKVVEVACGSHHSMALAAD-GEVFAWGYNNCGQVGSGSTANQPTPR 172

Query: 251 LI 252
            +
Sbjct: 173 KV 174


>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
 gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
            436)]
          Length = 1473

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 111/237 (46%), Gaps = 45/237 (18%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            TG WHSLAL   G V+ WG +  GQLG       ++++P  V+GL  V V  A  GY   
Sbjct: 1179 TGAWHSLALRLDGTVWAWGANGFGQLG--DGTTTARAVPVPVQGLRDV-VAIAAGGY--- 1232

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      HS+A+   G V+TWG +T GQLG      +S+++P +V  L  V  V   
Sbjct: 1233 ----------HSVAVRSDGTVWTWGYNTFGQLG--DGTSESRALPVQVHKLEGVQAV--T 1278

Query: 122  AGYSHCLVLTSSGVVTC-THKENGCGSDPSQ-------------GVQSNLVQDSHTTITS 167
             G  H L L + G V+   H  +G   D S+             G+       +HT   +
Sbjct: 1279 GGDHHSLALHADGTVSGWGHNASGQLGDGSRTDRYTPVRLKDVDGLTEVRAGAAHT--VA 1336

Query: 168  LNSPGELYTWGNNEYGQMGINNSNTTVTKPQ-RV--ESLVNLPIA-LIACGANHSFV 220
            L   G ++TWG+N +GQ+G       VT P+ R+  + +  LP A  I  GA HSF 
Sbjct: 1337 LGKDGTVWTWGDNAHGQLGDG-----VTGPRMRLVPKPVSGLPAATAIGAGAWHSFA 1388



 Score = 83.2 bits (204), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 117/248 (47%), Gaps = 39/248 (15%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLAS-VSVVQACAGYSHCLV 63
           HSL L   G V+ WGG++ GQLG   AD   Q + P R+  L   VSVV   A       
Sbjct: 77  HSLFLTPTGAVWAWGGNSAGQLG--GADTSFQRLSPARLPVLEDIVSVVSGDA------- 127

Query: 64  LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG 123
                   HSLAL   G V+TWG ++ GQLG  +   +++  P+RV+G     VV   AG
Sbjct: 128 --------HSLALGADGTVWTWGSNSSGQLGDGTTTDRAE--PQRVEGF--TDVVAVAAG 175

Query: 124 YSHCLVLTSSGVVTC-----------THKENGCGSDPSQGVQSNLVQDSHTTIT-SLNSP 171
             H LVL S G V              H + G    P  G++  +   +    T ++++ 
Sbjct: 176 DFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLEGVVALAAGFDFTLAVHAD 235

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G + +WG N +GQ+G+  + T    P+R+ +L    I  +A G  H+  L K    ++ +
Sbjct: 236 GAVSSWGANSFGQLGL-GTFTQRLSPERIPTLSG--ITSVAAGTYHAVALGKD-GTVWTW 291

Query: 232 GIGSAVQL 239
           G  S+ QL
Sbjct: 292 GSNSSGQL 299



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 122/263 (46%), Gaps = 39/263 (14%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LAL   G ++ WGG   GQLG   +++    +P  V GL +V+ +             
Sbjct: 378 HALALRKDGTLWAWGGGLAGQLGHGGSER--HVVPATVMGLTNVTSM------------- 422

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
             TG +HSLA  + G V+ WG +++GQLG  +  ++   +P RV GL SV  V A AG+ 
Sbjct: 423 -ATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTER--HVPVRVPGLPSVRAV-AAAGH- 477

Query: 126 HCLVLTSSGVVTCTHKENGCG--SDPS----------QGVQSNL-VQDSHTTITSLNSPG 172
           H + +   G V  T   N  G   D +           G+ S L +    + + +L S G
Sbjct: 478 HSIAVAMDGTV-WTWGRNAAGQLGDGTTRDRARPVAVSGLTSVLAIAAGGSHVLALRSDG 536

Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           +++ WG N  GQ+G   S   +T P RV  L   PI  +A G   S  L+     ++ +G
Sbjct: 537 DVWAWGYNALGQLGDGTSGDKLT-PVRVPGLA--PIQSVAAGTYFSMALAND-GTVWTWG 592

Query: 233 IGSAVQLDSPKSVHK-TPQLIHG 254
            G   QL     V + +P  + G
Sbjct: 593 EGFEGQLGDGGGVQRLSPVAVKG 615



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 41/237 (17%)

Query: 3    GLW--HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 60
            G W  H++AL   G +  WG +  GQLG  +  ++S   P  ++G+  V+ V        
Sbjct: 1128 GAWGQHAVALMADGTLQAWGDNATGQLGDGTTTRRSS--PGEIRGVTRVTAV-------- 1177

Query: 61   CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                  +TG WHSLAL   G V+ WG +  GQLG       ++++P  V+GL  V V  A
Sbjct: 1178 ------STGAWHSLALRLDGTVWAWGANGFGQLG--DGTTTARAVPVPVQGLRDV-VAIA 1228

Query: 121  CAGYSHCLVLTSSGVVTC----THKENGCGSDPS----------QGVQSNLVQDSHTTIT 166
              GY H + + S G V      T  + G G+  S          +GVQ+    D H+   
Sbjct: 1229 AGGY-HSVAVRSDGTVWTWGYNTFGQLGDGTSESRALPVQVHKLEGVQAVTGGDHHS--L 1285

Query: 167  SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            +L++ G +  WG+N  GQ+G + S T    P R++ +  L    +  GA H+  L K
Sbjct: 1286 ALHADGTVSGWGHNASGQLG-DGSRTDRYTPVRLKDVDGL--TEVRAGAAHTVALGK 1339



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 112/254 (44%), Gaps = 40/254 (15%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            HSL L   G V+TWG +  GQLG       ++  P RV+GL  +  V A  G +      
Sbjct: 828  HSLVLACDGTVWTWGENQRGQLG--DGTTSARVAPGRVEGLEGIVAV-AGGGDT------ 878

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                   SLAL   G V+ WG +  GQ+G  + + +    P+R++ L+ V V+    G S
Sbjct: 879  -------SLALRSDGTVWAWGANASGQVGDGTVEDR--LTPRRIEALSDVMVI--ALGES 927

Query: 126  HCLVLTSSGVV-----TCTHKENGCGSDPS---------QGVQSNLVQDSHTTITSLNSP 171
            H L +   G V       + +    G  PS         +GV S  V        ++   
Sbjct: 928  HALAVGEDGTVWAWGANASGQLGDGGETPSLLPARVKGLEGVGS--VAAGRAFSLAVRDD 985

Query: 172  GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
            G  + WG NE GQ+G + SN +   P RV S+  L    ++ GA+H+  L +    ++A+
Sbjct: 986  GTAWAWGANESGQLG-DGSNQSRRVPHRVASVKGLRA--VSAGAHHAMALGED-GAVWAW 1041

Query: 232  GIGSAVQLDSPKSV 245
            G  +  QL    S 
Sbjct: 1042 GDNTLGQLGDGTSA 1055



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 88/220 (40%), Gaps = 66/220 (30%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            H+LA+ + G V+ WG +  GQLG     +    +P RVKGL  V  V A   +S      
Sbjct: 928  HALAVGEDGTVWAWGANASGQLG--DGGETPSLLPARVKGLEGVGSVAAGRAFS------ 979

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV---KGLASVSVVQACA 122
                    LA+ D G  + WG +  GQLG  S   +S+ +P RV   KGL +VS     A
Sbjct: 980  --------LAVRDDGTAWAWGANESGQLGDGS--NQSRRVPHRVASVKGLRAVS-----A 1024

Query: 123  GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
            G  H + L   G V                                      + WG+N  
Sbjct: 1025 GAHHAMALGEDGAV--------------------------------------WAWGDNTL 1046

Query: 183  GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
            GQ+G   S  TV  PQRV  L +  +  +A G   S  ++
Sbjct: 1047 GQLGDGTSAFTVMWPQRVAELSD--VESVAAGEQFSVAVA 1084



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 129/300 (43%), Gaps = 63/300 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL   G V+TWG ++ GQLG  +   +++  P+RV+G     VV   AG  H LVL 
Sbjct: 128 HSLALGADGTVWTWGSNSSGQLGDGTTTDRAE--PQRVEGF--TDVVAVAAGDFHSLVLK 183

Query: 66  S--------------------TTGLW------------------HSLALNDCGEVFTWGG 87
           S                     TGLW                   +LA++  G V +WG 
Sbjct: 184 SDGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLEGVVALAAGFDFTLAVHADGAVSSWGA 243

Query: 88  DTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVV----TCTHKEN 143
           ++ GQLGL +  ++    P+R+  L+ ++ V   AG  H + L   G V    + +  + 
Sbjct: 244 NSFGQLGLGTFTQRLS--PERIPTLSGITSV--AAGTYHAVALGKDGTVWTWGSNSSGQL 299

Query: 144 GCGSDPSQGVQSNLVQ-DSHTTITSLNS-------PGELYTWGNNEYGQMGINNSNTTVT 195
           G G+   + V + L        + SL++        G++  WG N  GQ+G  ++    T
Sbjct: 300 GDGTWNDRAVPAPLPGVGGARAVASLDAGSLALLEGGDVLAWGANNSGQLGDGDTADRST 359

Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS-VHKTPQLIHG 254
            P  V  L    +  +  GA H+  L K    L+A+G G A QL    S  H  P  + G
Sbjct: 360 -PSLVPELS--AVTAVVGGAQHALALRKD-GTLWAWGGGLAGQLGHGGSERHVVPATVMG 415



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 18/131 (13%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            H++AL   G V+TWG + HGQLG      + + +PK V GL + + + A           
Sbjct: 1333 HTVALGKDGTVWTWGDNAHGQLGDGVTGPRMRLVPKPVSGLPAATAIGA----------- 1381

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
               G WHS A       FTWG ++HGQLG+   D   ++ P+R+K L+ + V+    G  
Sbjct: 1382 ---GAWHSFASGPEEGAFTWGRNSHGQLGV--GDNAPRAEPQRMKLLSGLKVI--AGGAD 1434

Query: 126  HCLVLTSSGVV 136
              L +T  GV+
Sbjct: 1435 TSLAMTQEGVL 1445



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 116/269 (43%), Gaps = 55/269 (20%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL+  G V  WG + +GQLG       S+ +P  + GL+ +  +             
Sbjct: 678 HSLALHADGTVRAWGSNGYGQLG--DGTLTSRVLPSVIPGLSGIQALH------------ 723

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  H LAL+    +  WG +  GQLGL +A   ++  P +V+G+  V   +  AG +
Sbjct: 724 --PGHLHVLALHADKTLRGWGYNRFGQLGLGAAGWSAR--PVQVRGIGRVE--RLAAGRA 777

Query: 126 HCLVLTSSGVVTC--------------THKENG-------CGSDPSQGVQSNLVQDSHTT 164
           H L++ + G V                TH           C    + G Q +LV      
Sbjct: 778 HALLVRADGSVVAWGANASGQLGDGGTTHGARAVTVRGVSCARSVASGGQHSLV------ 831

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
              L   G ++TWG N+ GQ+G   ++  V  P RVE L    I  +A G + S  L +S
Sbjct: 832 ---LACDGTVWTWGENQRGQLGDGTTSARVA-PGRVEGLEG--IVAVAGGGDTSLAL-RS 884

Query: 225 VSRLYAFGIGSAVQL-DSPKSVHKTPQLI 252
              ++A+G  ++ Q+ D       TP+ I
Sbjct: 885 DGTVWAWGANASGQVGDGTVEDRLTPRRI 913



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 132/319 (41%), Gaps = 68/319 (21%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLG-LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
           H LAL   G+V+ WG +  GQLG   S DK +   P RV GLA +  V A   +S  L  
Sbjct: 528 HVLALRSDGDVWAWGYNALGQLGDGTSGDKLT---PVRVPGLAPIQSVAAGTYFSMALAN 584

Query: 65  TSTTGLW------------------------------------HSLALNDCGEVFTWGGD 88
             T   W                                    H+LA+   G V+ WG +
Sbjct: 585 DGTVWTWGEGFEGQLGDGGGVQRLSPVAVKGLSDIRNISVGSAHALAVRGDGTVWAWGDN 644

Query: 89  THGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCG-- 146
             GQLG  S     +  P +V+ L  ++ V    G SH L L + G V      NG G  
Sbjct: 645 NEGQLGDGS--WMDRFAPVQVRNLTGITAV--SGGRSHSLALHADGTVRA-WGSNGYGQL 699

Query: 147 SD--------PS-----QGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
            D        PS      G+Q+  +   H  + +L++   L  WG N +GQ+G+  +  +
Sbjct: 700 GDGTLTSRVLPSVIPGLSGIQA--LHPGHLHVLALHADKTLRGWGYNRFGQLGLGAAGWS 757

Query: 194 VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQL-I 252
             +P +V  +    +  +A G  H+ ++ ++   + A+G  ++ QL    + H    + +
Sbjct: 758 A-RPVQVRGIGR--VERLAAGRAHALLV-RADGSVVAWGANASGQLGDGGTTHGARAVTV 813

Query: 253 HGPWIASPVAMTAGEDSLV 271
            G   A  VA + G+ SLV
Sbjct: 814 RGVSCARSVA-SGGQHSLV 831



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 108/274 (39%), Gaps = 58/274 (21%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            H++AL + G V+ WG +T GQLG +     +   P+RV  L+ V  V A   +       
Sbjct: 1028 HAMALGEDGAVWAWGDNTLGQLG-DGTSAFTVMWPQRVAELSDVESVAAGEQF------- 1079

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                   S+A+   G  F+WG + +GQLG      +      ++ G  + +VV   A   
Sbjct: 1080 -------SVAVAHDGTAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQ 1132

Query: 126  HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGEL----------- 174
            H + L + G +     +N  G            Q    T T  +SPGE+           
Sbjct: 1133 HAVALMADGTLQA-WGDNATG------------QLGDGTTTRRSSPGEIRGVTRVTAVST 1179

Query: 175  --------------YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
                          + WG N +GQ+G + + T    P  V+ L +  +  IA G  HS  
Sbjct: 1180 GAWHSLALRLDGTVWAWGANGFGQLG-DGTTTARAVPVPVQGLRD--VVAIAAGGYHSVA 1236

Query: 221  LSKSVSRLYAFGIGSAVQL-DSPKSVHKTPQLIH 253
            + +S   ++ +G  +  QL D        P  +H
Sbjct: 1237 V-RSDGTVWTWGYNTFGQLGDGTSESRALPVQVH 1269



 Score = 49.3 bits (116), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 18/107 (16%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G WHS A       FTWG ++HGQLG+   D   ++ P+R+K L+ + V+   A  S   
Sbjct: 1382 GAWHSFASGPEEGAFTWGRNSHGQLGV--GDNAPRAEPQRMKLLSGLKVIAGGADTS--- 1436

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV 109
                       LA+   G + +WG   HG LGL    +++   P RV
Sbjct: 1437 -----------LAMTQEGVLMSWGSSLHGTLGLGVLGQRAS--PGRV 1470


>gi|198477465|ref|XP_002136602.1| GA29094 [Drosophila pseudoobscura pseudoobscura]
 gi|198142893|gb|EDY71606.1| GA29094 [Drosophila pseudoobscura pseudoobscura]
          Length = 243

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 54/235 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLES-ADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
           HSLAL  CGE+++WG + +GQLG++S  D    + P ++  +   S+     G +H  ++
Sbjct: 55  HSLALTSCGELYSWGYNIYGQLGVQSPKDLPHFNAPVQLTTILGTSLATIACGGNHSFLI 114

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
           + ++             VF WG +T GQLGL   D++S++ P ++K + ++ V     G 
Sbjct: 115 SKSS------------AVFGWGKNTCGQLGLN--DEQSRAYPSQLKTMRTLGVRFVPCGD 160

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
            + + LT+ G V                                      +T G   YGQ
Sbjct: 161 EYSVFLTNEGGV--------------------------------------FTCGAGNYGQ 182

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           +G   S   +  P+ V  L+   I  +ACG  H+  L +S  R+Y+FG+G++ QL
Sbjct: 183 LGHGVSYNEMI-PRMVMELMGSTITQVACGNRHTLALVRSGGRVYSFGLGASGQL 236


>gi|386723136|ref|YP_006189462.1| BNR repeat-containing protein [Paenibacillus mucilaginosus K02]
 gi|384090261|gb|AFH61697.1| BNR repeat domain-containing protein [Paenibacillus mucilaginosus
           K02]
          Length = 686

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 130/283 (45%), Gaps = 32/283 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL   G V+ WG + +G LG +      +  P +V+GL+  SVV   A +S      
Sbjct: 92  HSLALKSDGTVWAWGQNEYGVLGEDPYKTSWRLTPVQVQGLS--SVVAISANFS------ 143

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS--IPKRVKGLASVSVVQACAG 123
                 H+LAL   G V+ WG +  GQLG  +      S   P +V+GL SV  V A  G
Sbjct: 144 ------HNLALKSDGTVWAWGMNNAGQLGNGTTSDMYTSFYTPSQVQGLDSVIAVAAGPG 197

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPS-------QGVQSNLVQDSHTTITSLNSPGELYT 176
            S  L L S G +       G G+  S       QG+ S +  D+  +   + S G ++ 
Sbjct: 198 TS--LALKSDGTLWAWGGLVGDGTTESRSTPVQAQGLSSVVSFDAGDSRFVVKSDGTVWA 255

Query: 177 WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
           WG N YGQ+G + + TT   P  ++ L +  +A  A    HS  L KS   ++ +G  S 
Sbjct: 256 WGWNGYGQLG-DGTTTTRYTPVPLQELSS--VAAFAADEWHSLAL-KSDGTVWEWGCNSK 311

Query: 237 VQLDSPKSVHKTPQLIHGPWIASPVAMTAG-EDSLVSHSGGLV 278
            ++     +  TP  +    ++S V + AG E SL   S G V
Sbjct: 312 GEMCYESDIRTTPVQVQD--LSSAVDIAAGFEHSLAVKSDGTV 352



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 118/297 (39%), Gaps = 74/297 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL + G V+ WG D+ G     +    S + P +VK L  V  V A        
Sbjct: 42  GRFHSLALKEDGTVWAWGKDSLG-----NGTPYSSATPVQVKDLEEVVTVAAGGN----- 91

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HSLAL   G V+ WG + +G LG +      +  P +V+GL+  SVV   A
Sbjct: 92  ---------HSLALKSDGTVWAWGQNEYGVLGEDPYKTSWRLTPVQVQGLS--SVVAISA 140

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
            +SH L L S G V                                      + WG N  
Sbjct: 141 NFSHNLALKSDGTV--------------------------------------WAWGMNNA 162

Query: 183 GQMGINNSN---TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           GQ+G   ++   T+   P +V+ L +  +  +A G   S  L KS   L+A+G    +  
Sbjct: 163 GQLGNGTTSDMYTSFYTPSQVQGLDS--VIAVAAGPGTSLAL-KSDGTLWAWG---GLVG 216

Query: 240 DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG----GDHSIVT 292
           D       TP    G  ++S V+  AG+   V  S G V    ++G    GD +  T
Sbjct: 217 DGTTESRSTPVQAQG--LSSVVSFDAGDSRFVVKSDGTVWAWGWNGYGQLGDGTTTT 271



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 91/229 (39%), Gaps = 56/229 (24%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYSHCLV 63
           H+LAL   G V+ WG +  GQLG  +      S   P +V+GL SV  V A  G S  L 
Sbjct: 144 HNLALKSDGTVWAWGMNNAGQLGNGTTSDMYTSFYTPSQVQGLDSVIAVAAGPGTSLALK 203

Query: 64  LTSTTGLWHSLA-------------------------------LNDCGEVFTWGGDTHGQ 92
              T   W  L                                +   G V+ WG + +GQ
Sbjct: 204 SDGTLWAWGGLVGDGTTESRSTPVQAQGLSSVVSFDAGDSRFVVKSDGTVWAWGWNGYGQ 263

Query: 93  LGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQG 152
           LG  +   +   +P  ++ L+SV+     A   H L L S G V     E GC S     
Sbjct: 264 LGDGTTTTRYTPVP--LQELSSVAAF--AADEWHSLALKSDGTV----WEWGCNSKGEMC 315

Query: 153 VQSNL------VQDSHTTIT---------SLNSPGELYTWGNNEYGQMG 186
            +S++      VQD  + +          ++ S G ++ WGNN YGQMG
Sbjct: 316 YESDIRTTPVQVQDLSSAVDIAAGFEHSLAVKSDGTVWAWGNNGYGQMG 364



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 19/112 (16%)

Query: 5   WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
           WHSLAL   G V+ WG ++ G++  ES     ++ P +V+ L+  S V   AG+      
Sbjct: 292 WHSLALKSDGTVWEWGCNSKGEMCYES---DIRTTPVQVQDLS--SAVDIAAGFE----- 341

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
                  HSLA+   G V+ WG + +GQ+G   A +   S P +V GL   S
Sbjct: 342 -------HSLAVKSDGTVWAWGNNGYGQMG--DAARTYHSTPIQVLGLGEPS 384



 Score = 44.7 bits (104), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 22/166 (13%)

Query: 117 VVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTIT---------S 167
           V    AG  H L L   G V    K++     P        V+D    +T         +
Sbjct: 36  VTMVAAGRFHSLALKEDGTVWAWGKDSLGNGTPYSSATPVQVKDLEEVVTVAAGGNHSLA 95

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVT-KPQRVESLVNLPIALIACGANHSFVLS-KSV 225
           L S G ++ WG NEYG +G +   T+    P +V+ L     +++A  AN S  L+ KS 
Sbjct: 96  LKSDGTVWAWGQNEYGVLGEDPYKTSWRLTPVQVQGLS----SVVAISANFSHNLALKSD 151

Query: 226 SRLYAFGIGSAVQLDSPKSVHK-----TPQLIHGPWIASPVAMTAG 266
             ++A+G+ +A QL +  +        TP  + G  + S +A+ AG
Sbjct: 152 GTVWAWGMNNAGQLGNGTTSDMYTSFYTPSQVQG--LDSVIAVAAG 195


>gi|334330728|ref|XP_001378629.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Monodelphis
           domestica]
          Length = 531

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 96/230 (41%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL   GEV+ WG +  GQ+G  S    +Q  P++V     +  V + A      
Sbjct: 136 GSHHSMALAADGEVYAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVSIA------ 187

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V+Q   
Sbjct: 188 -----CGQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPCRVAALHSVCVLQIVC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 241 GYAHTLALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N +  ++ P ++       + + AC + H+         +Y +G
Sbjct: 263 GQLGTGNKSNLLS-PAQIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 96/236 (40%), Gaps = 54/236 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H L   + G V+ WG + + QLG  + ++              ++ +Q C       V+ 
Sbjct: 86  HVLLSTEDGMVYAWGHNGYSQLGNGTTNQ-------------GIAPIQVCTNLLIKQVIE 132

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HS+AL   GEV+ WG +  GQ+G  S    +Q  P++V     +  V + A   
Sbjct: 133 VACGSHHSMALAADGEVYAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVSIA--- 187

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CG   S  V  N               GE+Y WG N  GQ+
Sbjct: 188 -------------------CGQTSSMAVLDN---------------GEVYGWGYNGNGQL 213

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
           G+ N+   +T P RV +L ++ +  I CG  H+  L+     LYA+G  +  QL +
Sbjct: 214 GLGNNGNQLT-PCRVAALHSVCVLQIVCGYAHTLALTDE-GLLYAWGANTYGQLGT 267



 Score = 46.6 bits (109), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 2/82 (2%)

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G +Y WG+N Y Q+G   +N  +   Q   +L+   +  +ACG++HS  L+     +YA+
Sbjct: 94  GMVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAAD-GEVYAW 152

Query: 232 GIGSAVQLDSPKSVHK-TPQLI 252
           G  +  Q+ S  + ++ TP+ +
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKV 174


>gi|321466075|gb|EFX77073.1| hypothetical protein DAPPUDRAFT_321780 [Daphnia pulex]
          Length = 634

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 86/192 (44%), Gaps = 16/192 (8%)

Query: 898  GGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMD 957
             G  V+YT FY   L  + D+  +Y  W S  P+   +   C YPFI    AK  +L  D
Sbjct: 188  SGPLVSYTEFYNSTLDHI-DLMKEYLTWQS--PDRPGQFSYCQYPFILSIAAKRFILTKD 244

Query: 958  QRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLK 1017
               QM     ++      +   P     +L + V R + V D++ E++     D KK L+
Sbjct: 245  SEQQMILTARRSLVSKMSRNQPPRLELFFLNIHVRRSHFVLDSLNEIS-IKQRDLKKKLR 303

Query: 1018 VNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSED 1077
            V+            F GE   D GG+ +E+  LL++EI  P YGMF  Y   R  WFS  
Sbjct: 304  VS------------FVGEPGLDMGGLTKEWFQLLIREIFQPDYGMFIYYPNARCYWFSTS 351

Query: 1078 TFEDQNMYFLIG 1089
            T  +   Y LIG
Sbjct: 352  TETNLKEYNLIG 363



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 16/105 (15%)

Query: 725 YEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPIL----- 779
           Y   R  WFS  T  +     LIG L GLA+YN  I+++ FP   Y+K+L  P++     
Sbjct: 340 YPNARCYWFSTSTETNLKEYNLIGVLMGLAVYNSIILDLHFPSICYRKLLSPPVVPANNS 399

Query: 780 ----------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
                     L DL    P +   L+++L Y E ++E+   +TF+
Sbjct: 400 ARVGVVRNFNLDDLAQFMPEVVFGLKELLAY-EGNVEEDMALTFQ 443


>gi|291408963|ref|XP_002720777.1| PREDICTED: regulator of chromosome condensation (RCC1) and BTB
           (POZ) domain containing protein 1 [Oryctolagus
           cuniculus]
          Length = 531

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 92/230 (40%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+ L   GEV+ WG +  GQ+G  S    +Q  P++V     +  V   A      
Sbjct: 136 GSHHSMVLAADGEVYAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA------ 187

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L SV V Q   
Sbjct: 188 -----CGQTSSMAVLDNGEVYAWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVNQIVC 240

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      LY WG N Y
Sbjct: 241 GYAHTLALTDEGL--------------------------------------LYAWGANTY 262

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N N  ++ P  V       + + AC + H+         +Y +G
Sbjct: 263 GQLGTGNKNNLLS-PAHVMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 43/182 (23%)

Query: 73  SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLT 131
           +L + D  EVF +G +    LG  + D +S  +PK+++ L    +     G   H L+ T
Sbjct: 34  ALYVTDSDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLST 91

Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
             GVV                                      Y WG+N Y Q+G   +N
Sbjct: 92  EDGVV--------------------------------------YAWGHNGYSQLGNGTTN 113

Query: 192 TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQ 250
             +   Q   +L+   +  +ACG++HS VL+     +YA+G  +  Q+ S  + ++ TP+
Sbjct: 114 QGIAPIQVCTNLLIKQVVEVACGSHHSMVLAAD-GEVYAWGYNNCGQVGSGSTANQPTPR 172

Query: 251 LI 252
            +
Sbjct: 173 KV 174


>gi|395770833|ref|ZP_10451348.1| hypothetical protein Saci8_13710 [Streptomyces acidiscabies 84-104]
          Length = 393

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 126/262 (48%), Gaps = 44/262 (16%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+LAL+  G+V++WG +++GQLG  +    S+++P RV+G+     + A   +       
Sbjct: 128 HALALDTSGQVYSWGDNSYGQLG-NNRTGDSRTVPDRVQGMPKAKQISAGCDF------- 179

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                  SLAL + G+V+ WG   HGQLG  + ++ + S+P++V GL    +V+  AG  
Sbjct: 180 -------SLALLENGKVYAWGRGIHGQLG--TGNRATSSVPRQVTGLE--DIVKIDAGCY 228

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQ---DSHTTIT----------SLNSPG 172
           H L +T+   V  +   N  G   +   +S+ V    D  T ++          ++ S  
Sbjct: 229 HALAITADNTVK-SWGYNLYGQLGNSATKSSTVPVDVDWLTDVSDIEAGAWHNYAMTSDS 287

Query: 173 ELYTWGNNEYGQM-------GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
            +Y WGNN+YGQ+       G N S T  T P  +  L    +  +A GA H   +  + 
Sbjct: 288 HVYGWGNNQYGQLLEGDQADGDNISRTNRTAPVEIPRLEG--VQHLAAGARHGVAV--TA 343

Query: 226 SRLYAFGIGSAVQLDSPKSVHK 247
             ++ +G  S  QL +  +V +
Sbjct: 344 DDVFTWGNNSEGQLGNGTTVSR 365



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 100/242 (41%), Gaps = 60/242 (24%)

Query: 16  VFTWGGDTHGQLGLES-ADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
           V +WG    GQLG  + +D  S   P  V  L    V Q  AG +             +L
Sbjct: 32  VLSWGAGRTGQLGNGTLSDSLS---PASVTSLFRGDVDQMSAGGTSSADS-------FTL 81

Query: 75  ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG 134
           A  D   V  WG ++ GQLG  +    +Q++P  V  L +V  +   AG  H L L +SG
Sbjct: 82  ARTDK-TVKAWGHNSAGQLG--NGGNTNQAVPTTVPRLTNVKDI--AAGGKHALALDTSG 136

Query: 135 VVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTV 194
                                                 ++Y+WG+N YGQ+G N +  + 
Sbjct: 137 --------------------------------------QVYSWGDNSYGQLGNNRTGDSR 158

Query: 195 TKPQRVESLVNLPIA-LIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP-KSVHKTPQLI 252
           T P RV+    +P A  I+ G + S  L ++  ++YA+G G   QL +  ++    P+ +
Sbjct: 159 TVPDRVQG---MPKAKQISAGCDFSLALLEN-GKVYAWGRGIHGQLGTGNRATSSVPRQV 214

Query: 253 HG 254
            G
Sbjct: 215 TG 216



 Score = 47.8 bits (112), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 80/201 (39%), Gaps = 54/201 (26%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +H+LA+     V +WG + +GQLG  ++  KS ++P  V  L  VS ++A        
Sbjct: 226 GCYHALAITADNTVKSWGYNLYGQLG--NSATKSSTVPVDVDWLTDVSDIEA-------- 275

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G WH+ A+     V+ WG + +GQL LE       +I  R    A V + +   
Sbjct: 276 ------GAWHNYAMTSDSHVYGWGNNQYGQL-LEGDQADGDNI-SRTNRTAPVEIPR-LE 326

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           G  H       GV                                     +++TWGNN  
Sbjct: 327 GVQHLAAGARHGVAVTAD--------------------------------DVFTWGNNSE 354

Query: 183 GQMGINNSNTTVTKPQRVESL 203
           GQ+G   + TTV++   V+ L
Sbjct: 355 GQLG---NGTTVSRFDSVKIL 372



 Score = 40.4 bits (93), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 9/121 (7%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WH+ A+     V+ WG + +GQL LE       +I  R    A V + +   G  H  
Sbjct: 276 GAWHNYAMTSDSHVYGWGNNQYGQL-LEGDQADGDNI-SRTNRTAPVEIPR-LEGVQHLA 332

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G  H +A+    +VFTWG ++ GQLG  +   +  S+    +G A  +V  +  
Sbjct: 333 A-----GARHGVAVT-ADDVFTWGNNSEGQLGNGTTVSRFDSVKILQEGSAIKNVTASLG 386

Query: 123 G 123
           G
Sbjct: 387 G 387


>gi|221482673|gb|EEE21011.1| ubiquitin-transferase domain-containing protein, putative [Toxoplasma
            gondii GT1]
          Length = 905

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 82/160 (51%), Gaps = 18/160 (11%)

Query: 936  DF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFN-PHTL--NQYLEVEV 991
            DF L  +PF+ DA  K + L+    +Q  H   +         F    TL  N +L++ V
Sbjct: 499  DFALLQHPFVLDAANKASALKRQAAVQQFHQARRVEMDAIFSLFTGQETLDRNPFLDIVV 558

Query: 992  SRDNIVEDTIRELAQYTT--NDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLM 1049
             R++IV+DT+ E+ + +   N  KK L+V            +F GEE  D GGV++EF  
Sbjct: 559  RREHIVQDTLFEIDRRSRVPNALKKALRV------------RFSGEEGVDEGGVKKEFFQ 606

Query: 1050 LLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            LL++E+  P Y MF   EE+R  WF+  + E+   + LIG
Sbjct: 607  LLVQELFSPGYDMFSHCEESRLCWFNPVSTEEMGNFRLIG 646



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 2/89 (2%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP-ILLQDLK 784
           EE+R  WF+  + E+     LIG + GLAIYN  ++ + FP  +++K+L  P   L DL 
Sbjct: 624 EESRLCWFNPVSTEEMGNFRLIGAIFGLAIYNGVLLGVNFPSVIFRKLLGWPSASLGDLA 683

Query: 785 DLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L P +A+SL+ +L   E D+    G+TF
Sbjct: 684 ELQPAVARSLRALLSASEEDVA-AMGLTF 711


>gi|237841819|ref|XP_002370207.1| E3 ubiquitin-protein ligase, putative [Toxoplasma gondii ME49]
 gi|211967871|gb|EEB03067.1| E3 ubiquitin-protein ligase, putative [Toxoplasma gondii ME49]
 gi|221503133|gb|EEE28839.1| ubiquitin-transferase domain-containing protein, putative [Toxoplasma
            gondii VEG]
          Length = 902

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 82/160 (51%), Gaps = 18/160 (11%)

Query: 936  DF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFN-PHTL--NQYLEVEV 991
            DF L  +PF+ DA  K + L+    +Q  H   +         F    TL  N +L++ V
Sbjct: 496  DFALLQHPFVLDAANKASALKRQAAVQQFHQARRVEMDAIFSLFTGQETLDRNPFLDIVV 555

Query: 992  SRDNIVEDTIRELAQYTT--NDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLM 1049
             R++IV+DT+ E+ + +   N  KK L+V            +F GEE  D GGV++EF  
Sbjct: 556  RREHIVQDTLFEIDRRSRVPNALKKALRV------------RFSGEEGVDEGGVKKEFFQ 603

Query: 1050 LLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            LL++E+  P Y MF   EE+R  WF+  + E+   + LIG
Sbjct: 604  LLVQELFSPGYDMFSHCEESRLCWFNPVSTEEMGNFRLIG 643



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 2/89 (2%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP-ILLQDLK 784
           EE+R  WF+  + E+     LIG + GLAIYN  ++ + FP  +++K+L  P   L DL 
Sbjct: 621 EESRLCWFNPVSTEEMGNFRLIGAIFGLAIYNGVLLGVNFPSVIFRKLLGWPSASLGDLA 680

Query: 785 DLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L P +A+SL+ +L   E D+    G+TF
Sbjct: 681 ELQPAVARSLRALLSASEEDVA-AMGLTF 708


>gi|344298018|ref|XP_003420691.1| PREDICTED: ubiquitin-protein ligase E3A [Loxodonta africana]
          Length = 878

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 75/151 (49%), Gaps = 18/151 (11%)

Query: 942  PFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTI 1001
            PFI +A  K   L  D RI+M      T  Y  +Q      LN YL ++V RD+I++D +
Sbjct: 484  PFILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQG---QQLNPYLRLKVRRDHIIDDAL 540

Query: 1002 REL---AQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDP 1058
              L   A     D KK L             V+F GE+  D GGV +EF  L+++EI +P
Sbjct: 541  VRLEMIAMENPADLKKQL------------YVEFEGEQGVDEGGVSKEFFQLVVEEIFNP 588

Query: 1059 KYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              GMF   E T+  WF+  +FE +  + LIG
Sbjct: 589  DIGMFTYDESTKVFWFNPSSFETEGQFTLIG 619



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 62/95 (65%), Gaps = 2/95 (2%)

Query: 721 GITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPIL 779
           G+  Y+E T+  WF+  +FE +    LIG + GLAIYN  I+++ FP+ +Y+K++ +   
Sbjct: 591 GMFTYDESTKVFWFNPSSFETEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGT 650

Query: 780 LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
            +DL D  P L +SL+D+L+Y E ++ED   ITF+
Sbjct: 651 FRDLGDSHPVLYQSLKDLLEY-EGNVEDDMMITFQ 684


>gi|344300782|gb|EGW31103.1| hypothetical protein SPAPADRAFT_72958 [Spathaspora passalidarum NRRL
            Y-27907]
          Length = 845

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 81/154 (52%), Gaps = 18/154 (11%)

Query: 937  FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHT-LNQYLEVEVSRDN 995
            + C YPF+     K ++LE + R QM     +     F+ + +  T ++ Y +V+V R+ 
Sbjct: 444  YFCQYPFLISLGGKISVLEYEARRQMGRKAEEA----FINSLDKRTTIDIYFKVKVRRER 499

Query: 996  IVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEI 1055
            IV+D++ E  +  +N+ KK LKV+            F  E   DAGG+R+E+ +LL + I
Sbjct: 500  IVQDSL-ECIKLNSNNLKKSLKVH------------FINEPGVDAGGLRKEWFLLLTRAI 546

Query: 1056 LDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
              P+ GM    E++  +WF+    E+  MY+L G
Sbjct: 547  FHPQTGMLHNVEDSNYLWFNIVPVENFEMYYLFG 580



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 4/86 (4%)

Query: 712 YPKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYK 771
           +P+ G+ H      E++  +WF+    E+  M +L G + GLAIYN TI+++ FPLALYK
Sbjct: 548 HPQTGMLH----NVEDSNYLWFNIVPVENFEMYYLFGAVLGLAIYNSTILDLQFPLALYK 603

Query: 772 KILDEPILLQDLKDLSPTLAKSLQDI 797
            ++ + +   D K + P   K+L  +
Sbjct: 604 ILMGKSLDHNDYKTIFPVSYKNLMSL 629


>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 4048

 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 115/256 (44%), Gaps = 37/256 (14%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGL-ASVSVVQACAGYSHC 61
           G  H LA+   G VF+WG +  GQLGL S   KS + P+ +  L     +  A   Y H 
Sbjct: 560 GCEHMLAVASDGAVFSWGYNDRGQLGLGSTISKSHT-PRMIDSLREKYHITTAAVSYHHS 618

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
            V++S             GE+ T+G +  GQLGL+    + Q  P+ V  L+S  V +A 
Sbjct: 619 AVVSSN------------GELLTFGMNDCGQLGLDHT--QHQHTPQVVDALSSQVVTKAA 664

Query: 122 AGYSHCLVLTSSGVVTCTHKEN----GCG-----SDPSQGVQSNLVQDSHTTIT------ 166
            G  H +  TS G V    K +    G G       P+  V+++L +     +       
Sbjct: 665 CGLYHTVAATSDGEVYSFGKNDYGQLGLGHARNIKTPAL-VKTSLGESDEKIVAVSCGYY 723

Query: 167 ---SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
              +++  G+L TWG N+YGQ+GI  S       Q V   ++  I   +CG  HS +L  
Sbjct: 724 HTVTISEKGKLITWGRNDYGQLGI-GSKEHKNSAQFVPLPMSSKIKNASCGCYHSLIL-M 781

Query: 224 SVSRLYAFGIGSAVQL 239
           S  R+  FG  +  QL
Sbjct: 782 SNGRVMVFGRNNKGQL 797



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 117/260 (45%), Gaps = 35/260 (13%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQACAGYSHCLVLT 65
           ++ +ND G VFT G +  GQ G  + +++   + P R     ++S+V A  G  H L + 
Sbjct: 510 AVVMNDGG-VFTCGLNKSGQCGNGTFEERVIIATPVRALSGIAISMVAAANGCEHMLAVA 568

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGL-ASVSVVQACAGY 124
           S             G VF+WG +  GQLGL S   KS + P+ +  L     +  A   Y
Sbjct: 569 SD------------GAVFSWGYNDRGQLGLGSTISKSHT-PRMIDSLREKYHITTAAVSY 615

Query: 125 SHCLVLTSSGVVTCTHKENGCGS---DPSQGVQSNLVQDSHTT------------ITSLN 169
            H  V++S+G +  T   N CG    D +Q   +  V D+ ++              +  
Sbjct: 616 HHSAVVSSNGEL-LTFGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAAT 674

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESL--VNLPIALIACGANHSFVLSKSVSR 227
           S GE+Y++G N+YGQ+G+ ++    T      SL   +  I  ++CG  H+  +S+   +
Sbjct: 675 SDGEVYSFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEK-GK 733

Query: 228 LYAFGIGSAVQLDSPKSVHK 247
           L  +G     QL      HK
Sbjct: 734 LITWGRNDYGQLGIGSKEHK 753



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 24/135 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS----IPKRVKGLASVSVVQACAGY 58
           G +H++ +++ G++ TWG + +GQLG+ S + K+ +    +P   K              
Sbjct: 721 GYYHTVTISEKGKLITWGRNDYGQLGIGSKEHKNSAQFVPLPMSSK-------------- 766

Query: 59  SHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRV--KGLASVS 116
               +  ++ G +HSL L   G V  +G +  GQLG  +    S  +P  V    LA+  
Sbjct: 767 ----IKNASCGCYHSLILMSNGRVMVFGRNNKGQLGAGARTLSSADLPLPVPSNSLANDE 822

Query: 117 VVQACAGYSHCLVLT 131
           VV+  AG+    +LT
Sbjct: 823 VVRIAAGFYSSYILT 837



 Score = 45.4 bits (106), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 28/194 (14%)

Query: 81  EVFTWGGDTHGQL--GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL--VLTSSGVV 136
           E+F+ G + +G+L  G  ++  K + +P       S   ++  AG +  L  V+   GV 
Sbjct: 465 ELFSCGQNNYGELCLGHCNSTSKLEHVP-----FFSAKGIRDVAGGNEVLAVVMNDGGVF 519

Query: 137 TCTHKENG-CGSDPSQ-------------GVQSNLVQDSH--TTITSLNSPGELYTWGNN 180
           TC   ++G CG+   +             G+  ++V  ++    + ++ S G +++WG N
Sbjct: 520 TCGLNKSGQCGNGTFEERVIIATPVRALSGIAISMVAAANGCEHMLAVASDGAVFSWGYN 579

Query: 181 EYGQMGINNSNTTVTKPQRVESLV-NLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           + GQ+G+ ++ +    P+ ++SL     I   A   +HS V+S S   L  FG+    QL
Sbjct: 580 DRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVS-SNGELLTFGMNDCGQL 638

Query: 240 DSPKSVHK-TPQLI 252
               + H+ TPQ++
Sbjct: 639 GLDHTQHQHTPQVV 652


>gi|327261091|ref|XP_003215365.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Anolis
           carolinensis]
          Length = 530

 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 54/230 (23%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL+  G+V+ WG +  GQ+G  S    +Q  P++V       +V + A      
Sbjct: 135 GSHHSLALSSDGDVYAWGYNNCGQVG--SGSTANQPTPRKVSNCLQTKIVVSIA------ 186

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G   S+A+ D GEV+ WG + +GQLGL   +  +Q  P RV  L  V ++Q   
Sbjct: 187 -----CGQTSSVAIVDNGEVYGWGYNGNGQLGL--GNNGNQLTPCRVAALQGVCIMQIAC 239

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G+                                      +Y+WG N Y
Sbjct: 240 GYAHTLALTDEGL--------------------------------------MYSWGANTY 261

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
           GQ+G  N +  ++ P ++       + + AC + H+         +Y +G
Sbjct: 262 GQLGTGNKSNQLS-PGQILMEKERVVEIAACHSAHTSAAKTQSGLVYMWG 310



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 104/249 (41%), Gaps = 57/249 (22%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H +   + GEV+ WG + + QLG  + ++              V+ +Q C       V+ 
Sbjct: 85  HVVLSTEDGEVYAWGHNGYSQLGNGTTNQ-------------GVTPIQVCTNLLIKKVIE 131

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G  HSLAL+  G+V+ WG +  GQ+G  S    +Q  P++V       +V + A   
Sbjct: 132 VACGSHHSLALSSDGDVYAWGYNNCGQVG--SGSTANQPTPRKVSNCLQTKIVVSIA--- 186

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                              CG   S  +  N               GE+Y WG N  GQ+
Sbjct: 187 -------------------CGQTSSVAIVDN---------------GEVYGWGYNGNGQL 212

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
           G+ N+   +T P RV +L  + I  IACG  H+  L+     +Y++G  +  QL +    
Sbjct: 213 GLGNNGNQLT-PCRVAALQGVCIMQIACGYAHTLALTDE-GLMYSWGANTYGQLGTG--- 267

Query: 246 HKTPQLIHG 254
           +K+ QL  G
Sbjct: 268 NKSNQLSPG 276


>gi|297800804|ref|XP_002868286.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297314122|gb|EFH44545.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1867

 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 125/278 (44%), Gaps = 42/278 (15%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
            G +H+ A++  G++FTWG   H    L      S  IPKRV G   V  +Q         
Sbjct: 1141 GEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSG--PVEGLQ--------- 1189

Query: 63   VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            VL+   G WHS      G++FT+G    G LG    D++S S PK VK L+ +  ++   
Sbjct: 1190 VLSVACGTWHSALATANGKLFTFGDGAFGVLG--HGDRESVSYPKEVKMLSGLKTMKVAC 1247

Query: 123  GYSHCL----VLTSSGVVTCTHK--------ENGCGSDPSQG----------VQSNLVQD 160
            G  H +    V+  +G    + K        +N  G    +           +  N  Q 
Sbjct: 1248 GVWHTVAIVEVMNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFQQI 1307

Query: 161  S--HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVES-LVNLPIALIACGANH 217
            +  HT   +L + G ++T G   +GQ+G +NS+  +  P  V+  LV   +  I+CG +H
Sbjct: 1308 ACGHTLTVALTTSGHVFTMGGTSHGQLGSSNSDGKL--PCLVQDRLVGEFVEEISCGDHH 1365

Query: 218  SFVLSKSVSRLYAFGIGSAVQL-DSPKSVHKTPQLIHG 254
              VL+ S S ++ +G GS  +L    K   KTP L+  
Sbjct: 1366 VAVLT-SRSEVFTWGKGSNGRLGHGDKEDRKTPTLVEA 1402



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 138/323 (42%), Gaps = 64/323 (19%)

Query: 3    GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV-VQACAGYSHC 61
            G+ H   +   GEVFTWG +  G+LG     +   S PK V+ LA  ++   AC  Y  C
Sbjct: 1089 GVRHIALVTRQGEVFTWGEEAGGRLG--HGIQVDVSRPKLVEFLALTNIDFVACGEYHTC 1146

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
             V TS             G++FTWG   H    L      S  IPKRV G +  + V+  
Sbjct: 1147 AVSTS-------------GDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSV 1193

Query: 121  CAGYSHCLVLTSSGVV---------TCTHKENGCGSDPSQ-----GVQS----------- 155
              G  H  + T++G +            H +    S P +     G+++           
Sbjct: 1194 ACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTMKVACGVWHTV 1253

Query: 156  NLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGA 215
             +V+  + T TS++S  +L+TWG+ +  ++G  N  T +  P  V SL++     IACG 
Sbjct: 1254 AIVEVMNQTGTSMSSK-KLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFQQIACGH 1311

Query: 216  NHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSG 275
              +  L+ S   ++  G  S  QL S  S  K P L+              +D LV    
Sbjct: 1312 TLTVALTTS-GHVFTMGGTSHGQLGSSNSDGKLPCLV--------------QDRLV---- 1352

Query: 276  GLVVKKIYSGGDHSIVTVTKSSD 298
            G  V++I S GDH +  +T  S+
Sbjct: 1353 GEFVEEI-SCGDHHVAVLTSRSE 1374



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 60/123 (48%), Gaps = 19/123 (15%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYSHCLVLT 65
            ++AL   G VFT GG +HGQLG  ++D K   +P  V+  L    V +   G  H  VLT
Sbjct: 1314 TVALTTSGHVFTMGGTSHGQLGSSNSDGK---LPCLVQDRLVGEFVEEISCGDHHVAVLT 1370

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGY 124
            S +            EVFTWG  ++G+LG    DK+ +  P  V+ L    V   +CA  
Sbjct: 1371 SRS------------EVFTWGKGSNGRLG--HGDKEDRKTPTLVEALKERHVKSISCADQ 1416

Query: 125  SHC 127
            S C
Sbjct: 1417 SVC 1419


>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
          Length = 1466

 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 127/263 (48%), Gaps = 36/263 (13%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G WHSLAL   G V+ WG +  GQLG  ++  +++  P +V GL  V V     GY   
Sbjct: 1172 SGAWHSLALLSDGTVWAWGANGFGQLGDGTSTPRTR--PVQVAGLGDV-VAIGSGGY--- 1225

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                      H+LA+   G V+TWG +  GQLG  +A+  S+S+P RV+GL    VV   
Sbjct: 1226 ----------HALAVCSDGSVWTWGYNAFGQLGDGTAE--SRSLPTRVEGLE--GVVAVA 1271

Query: 122  AGYSHCLVLTSSGVVTC-THKENGCGSDPSQGVQSNLV-----------QDSHTTITSLN 169
             G  + L L S G ++   +  +G   D +   + + V           +   T   +L 
Sbjct: 1272 GGDHYSLALHSDGTLSAWGNNASGQLGDGTGTTRYSRVAVKGVDGVVDVRAGATHTVALR 1331

Query: 170  SPGELYTWGNNEYGQMGINNSNTTVT-KPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
              G ++TWG+N +GQ+G   S T +   P+ V +L +  ++ +  GA H+F ++     +
Sbjct: 1332 GDGTVWTWGDNAFGQLGDGASGTRMRLVPRPVPNLSS--VSAVGAGARHTFAVALK-GTV 1388

Query: 229  YAFGIGSAVQLDSPKSVHKTPQL 251
            + +G  S  QL    + ++T  L
Sbjct: 1389 WTWGRNSHGQLGLGDNTNRTEPL 1411



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 118/287 (41%), Gaps = 88/287 (30%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G +H+LA+   G V+TWG +  GQLG  +A+  S+S+P RV+GL  V  V     YS  
Sbjct: 1222 SGGYHALAVCSDGSVWTWGYNAFGQLGDGTAE--SRSLPTRVEGLEGVVAVAGGDHYSLA 1279

Query: 62   LVLTSTTGLW------------------------------------HSLALNDCGEVFTW 85
            L    T   W                                    H++AL   G V+TW
Sbjct: 1280 LHSDGTLSAWGNNASGQLGDGTGTTRYSRVAVKGVDGVVDVRAGATHTVALRGDGTVWTW 1339

Query: 86   GGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGC 145
            G +  GQLG  ++  + + +P+ V  L+SVS V A A ++  + L               
Sbjct: 1340 GDNAFGQLGDGASGTRMRLVPRPVPNLSSVSAVGAGARHTFAVALK-------------- 1385

Query: 146  GSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVN 205
                                      G ++TWG N +GQ+G+ + NT  T+P RV  L +
Sbjct: 1386 --------------------------GTVWTWGRNSHGQLGLGD-NTNRTEPLRVRELSD 1418

Query: 206  LPIALIACGANHSF-------VLSKSVSRLYAFGIGSAVQLDSPKSV 245
              + +++ GA+ S        VLS   S   + G+G+     SP  V
Sbjct: 1419 --VTVVSGGADFSLAMKRDGTVLSWGSSLYGSLGLGATGHRSSPGQV 1463



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 117/251 (46%), Gaps = 38/251 (15%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           TG +HSLA    G V+ WG +T+GQLG  S  ++  ++  RV+GL  V  V + A   H 
Sbjct: 416 TGSFHSLAALGDGSVWAWGRNTYGQLGDGSTAERHAAV--RVEGLGGVRSVASAA---H- 469

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                     HSLA+   G V+ WG +  GQLG  +   +++  P  V GL SV+ V   
Sbjct: 470 ----------HSLAVGMDGTVWAWGRNAAGQLGDGTTLDRAR--PVAVPGLTSVTAV--A 515

Query: 122 AGYSHCLVLTSSGVVTCTH----KENGCGSDPSQ---------GVQSNLVQDSHTTITSL 168
           AG SH L L S G V         + G G+   +         G    +   S+ ++ +L
Sbjct: 516 AGGSHVLALRSDGSVWAWGYNALGQLGDGTTVDRLTPVRVSGLGAVVAVAAGSYFSM-AL 574

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRL 228
            S G ++TWG    GQ+G +        P RVE L N  I  +A G+ H+  + +    +
Sbjct: 575 QSDGTVWTWGEGFEGQLG-DGGGVQRLSPVRVEGLAN--ITRVAAGSAHALAV-RGDGTV 630

Query: 229 YAFGIGSAVQL 239
           +A+G     QL
Sbjct: 631 WAWGDNGEGQL 641



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 120/271 (44%), Gaps = 55/271 (20%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL   G V+TWGG++ GQLG        ++ P RV GL SV  V A           
Sbjct: 120 HSLALGADGSVWTWGGNSSGQLG--DGTTTDRATPMRVAGLDSVVAVAA----------- 166

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
              G +HSLAL + G V+ WG + HGQLG      +    P++V GL    VV   AG+ 
Sbjct: 167 ---GDFHSLALREDGTVWAWGTNFHGQLG--RGHTQPGLTPEQVPGLN--GVVALAAGFD 219

Query: 126 HCLVLTSSGVVTCTHKENGCG--SDPSQGVQSNLVQDSH-TTIT----------SLNSPG 172
             L +   G V      NG G   D +   + + V+ S  + IT          +L   G
Sbjct: 220 FTLAVLEDGTVRA-WGSNGSGQLGDGTSTQRLSPVKVSELSGITEVRAGTYHALALGKDG 278

Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQ-----RVESLVNL---PIALIACGANHSFVLSKS 224
            ++TWG+N  GQ+G    N      Q     RV+++ ++    +AL+  GA         
Sbjct: 279 GVWTWGSNASGQLGDGTWNDRAVPMQVPGLERVKAVASMDSDSLALLDTGA--------- 329

Query: 225 VSRLYAFGIGSAVQL-DSPKSVHKTPQLIHG 254
              ++A+G   + QL D   +   TP  + G
Sbjct: 330 ---VFAWGANGSGQLGDGDTTDRATPGPVPG 357



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 148/356 (41%), Gaps = 81/356 (22%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           SLAL D G VF WG +  GQLG    D   ++ P  V GL +V+ V    G  H LVL  
Sbjct: 321 SLALLDTGAVFAWGANGSGQLG--DGDTTDRATPGPVPGLNAVASV--VGGAQHALVLRK 376

Query: 67  TTGLW--------------------------------------HSLALNDCGEVFTWGGD 88
              LW                                      HSLA    G V+ WG +
Sbjct: 377 DGTLWAWGGGLSGQLGHGGSERHVVPAPVMRLAGVTSMATGSFHSLAALGDGSVWAWGRN 436

Query: 89  THGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKE------ 142
           T+GQLG  S  ++  ++  RV+GL  V  V + A   H L +   G V    +       
Sbjct: 437 TYGQLGDGSTAERHAAV--RVEGLGGVRSVASAA--HHSLAVGMDGTVWAWGRNAAGQLG 492

Query: 143 NGCGSDPSQ-----GVQS-NLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTK 196
           +G   D ++     G+ S   V    + + +L S G ++ WG N  GQ+G     TTV +
Sbjct: 493 DGTTLDRARPVAVPGLTSVTAVAAGGSHVLALRSDGSVWAWGYNALGQLG---DGTTVDR 549

Query: 197 --PQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIH 253
             P RV  L    +  +A G+  S  L +S   ++ +G G   QL     V + +P  + 
Sbjct: 550 LTPVRVSGLG--AVVAVAAGSYFSMAL-QSDGTVWTWGEGFEGQLGDGGGVQRLSPVRVE 606

Query: 254 GPWIASPVAMTAGEDSLVSHSGGLVVKK---IYSGGDHSIVTVTKSSDGVLSDDFR 306
           G  +A+   + AG     +H+  L V+    +++ GD+      +  DG  +D FR
Sbjct: 607 G--LANITRVAAGS----AHA--LAVRGDGTVWAWGDNG---EGQLGDGSWADRFR 651



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 120/257 (46%), Gaps = 42/257 (16%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           S+AL   G V+TWG    GQLG     ++    P RV+GLA+++ V A +          
Sbjct: 571 SMALQSDGTVWTWGEGFEGQLGDGGGVQRLS--PVRVEGLANITRVAAGSA--------- 619

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLES-ADKKSQSIPKRVKGLASVSVVQACAGYS 125
                H+LA+   G V+ WG +  GQLG  S AD+     P +V GL  ++ V    G S
Sbjct: 620 -----HALAVRGDGTVWAWGDNGEGQLGDGSWADRFR---PVQVPGLQGITAV--SGGRS 669

Query: 126 HCLVLTSSGVVTC----THKENGCGSDPSQ----------GVQSNLVQDSHTTITSLNSP 171
           H + L   G V       + + G G+  S+          G+Q+  +  SH  + +L++ 
Sbjct: 670 HSMALQGDGTVRAWGYNGYGQLGDGTLTSRVRPALIPGLTGIQA--LHPSHLHVLALHAD 727

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G L  WG N +GQ+G+  +  +   P +V  +    +  ++ G  H+ ++ ++   + A+
Sbjct: 728 GTLRGWGYNRFGQLGLGAAGWSAV-PVQVRGIGR--VDRLSVGRAHTLMV-RADGTVMAW 783

Query: 232 GIGSAVQLDSPKSVHKT 248
           G   + QL    S H+T
Sbjct: 784 GENGSGQLGDGTSTHRT 800



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 104/229 (45%), Gaps = 37/229 (16%)

Query: 6    HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
            H++     G V TWG +T GQLG  +  +++  +P  V GLASV  V             
Sbjct: 1126 HAVVQMSDGTVQTWGDNTFGQLGDGTTTRRA--VPLTVYGLASVVAV------------- 1170

Query: 66   STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
             ++G WHSLAL   G V+ WG +  GQLG  ++  +++  P +V GL  V V     GY 
Sbjct: 1171 -SSGAWHSLALLSDGTVWAWGANGFGQLGDGTSTPRTR--PVQVAGLGDV-VAIGSGGY- 1225

Query: 126  HCLVLTSSGVVTC----THKENGCGSDPSQGVQSN---------LVQDSHTTITSLNSPG 172
            H L + S G V         + G G+  S+ + +          +    H ++ +L+S G
Sbjct: 1226 HALAVCSDGSVWTWGYNAFGQLGDGTAESRSLPTRVEGLEGVVAVAGGDHYSL-ALHSDG 1284

Query: 173  ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
             L  WGNN  GQ+G     T  T+  RV       +  +  GA H+  L
Sbjct: 1285 TLSAWGNNASGQLG---DGTGTTRYSRVAVKGVDGVVDVRAGATHTVAL 1330



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 120/274 (43%), Gaps = 46/274 (16%)

Query: 7    SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
            S+AL   G V++WGG+  GQLG        +++P  V+ L++   V              
Sbjct: 871  SVALRADGSVWSWGGNASGQLG--DGTLTDRALPAHVEHLSNAVAV-------------- 914

Query: 67   TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
              G  H+LA+ + G ++ WG +  GQLG           P RVKGL  V+ V A   +S 
Sbjct: 915  AVGETHALAVGEDGALWAWGANGSGQLG--DGGTAPSLTPVRVKGLERVASVAAGRAFSV 972

Query: 127  CLVLTSSGVVTCTHKENGCG-------SDPSQ-----GVQSNLVQDSHTTITSLNSPGEL 174
             +    +     T+     G       S P+Q     G+++      H  + +L++ G +
Sbjct: 973  AVRDDGTAWAWGTNPSGQLGDGTNHARSVPNQVTSLKGIRAMSAGAHH--VVALSADGTV 1030

Query: 175  YTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF-VLSKSVSRLYAFGI 233
            +TWG+N  GQ+G  +S+ T   P++V  L    +  +A G   +  VL    +R  A+G 
Sbjct: 1031 WTWGDNTLGQLGDGSSSPTGMWPRQVPELRG--VEAVAAGEQFTVAVLLDGTAR--AWGS 1086

Query: 234  GSAVQLDSPKSVHKTPQL------IHGPWIASPV 261
                QL   K+    PQL      I GP I  PV
Sbjct: 1087 NEYGQLGDGKT---GPQLTPMAVKIEGPKIRPPV 1117



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 98/235 (41%), Gaps = 37/235 (15%)

Query: 2    TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            +G+ HSLAL   G V+ WG +  GQLG        +  P  V+GL  V V  A  G +  
Sbjct: 816  SGIQHSLALACDGTVWAWGANARGQLG--DGTTTPRVTPGLVEGLRGV-VALAAGGDA-- 870

Query: 62   LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
                       S+AL   G V++WGG+  GQLG        +++P  V+ L+  + V   
Sbjct: 871  -----------SVALRADGSVWSWGGNASGQLG--DGTLTDRALPAHVEHLS--NAVAVA 915

Query: 122  AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNL-------------VQDSHTTITSL 168
             G +H L +   G +      NG G     G   +L             V        ++
Sbjct: 916  VGETHALAVGEDGAL-WAWGANGSGQLGDGGTAPSLTPVRVKGLERVASVAAGRAFSVAV 974

Query: 169  NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
               G  + WG N  GQ+G + +N   + P +V SL    I  ++ GA+H   LS 
Sbjct: 975  RDDGTAWAWGTNPSGQLG-DGTNHARSVPNQVTSLKG--IRAMSAGAHHVVALSA 1026



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 109/250 (43%), Gaps = 43/250 (17%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI-PKRVKGLAS-VSVVQACAGYSHCLV 63
           HSL L+  G+V+ W    +G   L  A+   Q + P R+  L + VSVV   A       
Sbjct: 69  HSLYLSPGGDVWAW--GGNGSGQLGGAETSLQGLAPVRLAALENIVSVVSGDA------- 119

Query: 64  LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG 123
                   HSLAL   G V+TWGG++ GQLG        ++ P RV GL   SVV   AG
Sbjct: 120 --------HSLALGADGSVWTWGGNSSGQLG--DGTTTDRATPMRVAGLD--SVVAVAAG 167

Query: 124 YSHCLVLTSSGVV----TCTHKENGCGS-----DPSQ-----GVQSNLVQDSHTTITSLN 169
             H L L   G V    T  H + G G       P Q     GV + L      T+  L 
Sbjct: 168 DFHSLALREDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGLNGVVA-LAAGFDFTLAVLE 226

Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
             G +  WG+N  GQ+G + ++T    P +V  L    I  +  G  H+  L K    ++
Sbjct: 227 D-GTVRAWGSNGSGQLG-DGTSTQRLSPVKVSELSG--ITEVRAGTYHALALGKD-GGVW 281

Query: 230 AFGIGSAVQL 239
            +G  ++ QL
Sbjct: 282 TWGSNASGQL 291



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 96/250 (38%), Gaps = 63/250 (25%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H+L +   G V  WG +  GQLG  ++  ++   P  V G+  V  V             
Sbjct: 770 HTLMVRADGTVMAWGENGSGQLGDGTSTHRTG--PVSVPGVPCVRSV------------- 814

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
             +G+ HSLAL   G V+ WG +  GQLG        +  P  V+GL  V  + A     
Sbjct: 815 -ASGIQHSLALACDGTVWAWGANARGQLG--DGTTTPRVTPGLVEGLRGVVALAA----- 866

Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
                               G D S                +L + G +++WG N  GQ+
Sbjct: 867 --------------------GGDAS---------------VALRADGSVWSWGGNASGQL 891

Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL-DSPKS 244
           G + + T    P  VE L N     +A G  H+  + +    L+A+G   + QL D   +
Sbjct: 892 G-DGTLTDRALPAHVEHLSN--AVAVAVGETHALAVGED-GALWAWGANGSGQLGDGGTA 947

Query: 245 VHKTPQLIHG 254
              TP  + G
Sbjct: 948 PSLTPVRVKG 957


>gi|95007153|emb|CAJ20374.1| ubiquitin-protein ligase 1, putative [Toxoplasma gondii RH]
          Length = 1021

 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 82/160 (51%), Gaps = 18/160 (11%)

Query: 936  DF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFN-PHTL--NQYLEVEV 991
            DF L  +PF+ DA  K + L+    +Q  H   +         F    TL  N +L++ V
Sbjct: 615  DFALLQHPFVLDAANKASALKRQAAVQQFHQARRVEMDAIFSLFTGQETLDRNPFLDIVV 674

Query: 992  SRDNIVEDTIRELAQYTT--NDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLM 1049
             R++IV+DT+ E+ + +   N  KK L+V            +F GEE  D GGV++EF  
Sbjct: 675  RREHIVQDTLFEIDRRSRVPNALKKALRV------------RFSGEEGVDEGGVKKEFFQ 722

Query: 1050 LLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
            LL++E+  P Y MF   EE+R  WF+  + E+   + LIG
Sbjct: 723  LLVQELFSPGYDMFSHCEESRLCWFNPVSTEEMGNFRLIG 762



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 2/89 (2%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEP-ILLQDLK 784
           EE+R  WF+  + E+     LIG + GLAIYN  ++ + FP  +++K+L  P   L DL 
Sbjct: 740 EESRLCWFNPVSTEEMGNFRLIGAIFGLAIYNGVLLGVNFPSVIFRKLLGWPSASLGDLA 799

Query: 785 DLSPTLAKSLQDILDYREPDLEDVFGITF 813
           +L P +A+SL+ +L   E D+    G+TF
Sbjct: 800 ELQPAVARSLRALLSASEEDVA-AMGLTF 827


>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
 gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
 gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
          Length = 440

 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 123/262 (46%), Gaps = 33/262 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LA+   GEV +WG + +GQLGL   D +   +P++++    + +    AG  H   +T
Sbjct: 131 HCLAVTMEGEVQSWGRNQNGQLGL--GDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVT 188

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                         G+++ WG   +G LGL   D+  + +P+RV       +     G+ 
Sbjct: 189 ED------------GDLYGWGWGRYGNLGL--GDRTDRLVPERVTSTGGEKMSMVACGWR 234

Query: 126 HCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTIT----------SLNSP 171
           H + ++ SG +       + + G G      +   L   S++ I+          +L S 
Sbjct: 235 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD 294

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G+LY WG N++GQ+G+ N N     P +V    +  +  ++CG  H+  +++  + ++A+
Sbjct: 295 GKLYGWGWNKFGQVGVGN-NLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTER-NNVFAW 352

Query: 232 GIGSAVQLDSPKSVHKT-PQLI 252
           G G+  QL   +SV +  P++I
Sbjct: 353 GRGTNGQLGIGESVDRNFPKII 374



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 107/252 (42%), Gaps = 31/252 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS+AL     V +WG    GQLG    D + +  P ++  L    +V    G  H 
Sbjct: 22  AGASHSVALLSGDIVCSWGRGEDGQLG--HGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
            V  S +G+          EV++WG    G+LG  ++      +P  +K L  + + Q  
Sbjct: 80  -VAYSQSGM----------EVYSWGWGDFGRLGHGNSSDLFTPLP--IKALHGIRIKQIA 126

Query: 122 AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITS 167
            G SHCL +T  G V    +      G G              +G++  +V        +
Sbjct: 127 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAA 186

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           +   G+LY WG   YG +G+ +    +  P+RV S     ++++ACG  H+  +S S + 
Sbjct: 187 VTEDGDLYGWGWGRYGNLGLGDRTDRLV-PERVTSTGGEKMSMVACGWRHTISVSYSGA- 244

Query: 228 LYAFGIGSAVQL 239
           LY +G     QL
Sbjct: 245 LYTYGWSKYGQL 256


>gi|30695429|ref|NP_199644.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|26450138|dbj|BAC42188.1| regulator of chromosome condensation like [Arabidopsis thaliana]
 gi|28973207|gb|AAO63928.1| putative regulator of chromosome condensation (cell cycle
           regulatory protein) [Arabidopsis thaliana]
 gi|332008269|gb|AED95652.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 455

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 117/230 (50%), Gaps = 27/230 (11%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLG--LESADKKSQSIPKRVKGLASVSVVQACAGYS 59
            G +HSLA+   GE++ WG +  GQLG  +  + + S+S PKRV+GL +V+V  A   ++
Sbjct: 89  AGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAA---FA 145

Query: 60  HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ 119
             +V         S A+ D G ++ WG    GQLGL +   +++ +P RV+ LA+  VV+
Sbjct: 146 SGVV---------SAAIGDDGSLWVWGRSKRGQLGLGNGIIEAR-VPSRVENLAAEHVVK 195

Query: 120 ACAGYSHCLVLTSSG-VVTCTHKENGCGSDPSQGVQSNLVQD-SHTTITSLNSPGELYTW 177
              G+ H L LT  G V    +  +G   +    ++++L+   +  ++   ++ G+L   
Sbjct: 196 VSLGWGHALALTVDGKVFGWGYVADGRVGNVGLPLEASLLDSITDGSMKGHHAAGDL--- 252

Query: 178 GNNEYGQ------MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
            N E  +      M   N      +P  VE   N  +A IACG++HS +L
Sbjct: 253 -NLEAAEKKVVEAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLIL 301



 Score = 66.6 bits (161), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 40/158 (25%)

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLG--LESADKKSQSIPKRVKGLASVSVVQACAGY 124
           + G +HSLA+   GE++ WG +  GQLG  +  + + S+S PKRV+GL +V+V  A A  
Sbjct: 88  SAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFA-- 145

Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
                   SGVV+                             ++   G L+ WG ++ GQ
Sbjct: 146 --------SGVVS----------------------------AAIGDDGSLWVWGRSKRGQ 169

Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
           +G+ N       P RVE+L    +  ++ G  H+  L+
Sbjct: 170 LGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALALT 207



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 117/284 (41%), Gaps = 63/284 (22%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           S A+ D G ++ WG    GQLGL +   +++ +P RV+ LA+  VV+   G+ H L LT 
Sbjct: 150 SAAIGDDGSLWVWGRSKRGQLGLGNGIIEAR-VPSRVENLAAEHVVKVSLGWGHALALTV 208

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLG----------LESADKKSQSIPKRVKGL---- 112
                        G+VF WG    G++G          L+S    S         L    
Sbjct: 209 D------------GKVFGWGYVADGRVGNVGLPLEASLLDSITDGSMKGHHAAGDLNLEA 256

Query: 113 ASVSVVQACA-------GYSHCLVLTSSGVVTCTHK--ENGCGSDPSQGVQSNLVQDSHT 163
           A   VV+A +        +  CLV       TC  K  +  CGSD             H+
Sbjct: 257 AEKKVVEAMSKENDMPIAWEPCLVEE-----TCNEKVADIACGSD-------------HS 298

Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
            I  L   G L + G+N YGQ+G +  +  +      ES    PI+ IA G  HS  +  
Sbjct: 299 LI--LCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDITES----PIS-IAAGLGHSLAICN 351

Query: 224 SVSR-LYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAG 266
              R + ++G   + QL   K     P+ + G    SP +++AG
Sbjct: 352 RGERNILSWGWNRSRQLGRGKP-ENLPREVEGFDGESPASVSAG 394



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 23/134 (17%)

Query: 2   TGLWHSLALNDCGE--VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 59
            GL HSLA+ + GE  + +WG +   QLG      K +++P+ V+G    S     AG  
Sbjct: 341 AGLGHSLAICNRGERNILSWGWNRSRQLGR----GKPENLPREVEGFDGESPASVSAGRV 396

Query: 60  HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKGLASVSVV 118
           H L +T              GE + WG   +G+LGL  S+D+    + + V+G     V+
Sbjct: 397 HSLCVTEK------------GEAWVWGCGKNGRLGLGSSSDEPEPMLLEDVEGC----VL 440

Query: 119 QACAGYSHCLVLTS 132
           QA AG+ H L+L +
Sbjct: 441 QAVAGFDHSLILVA 454



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 28/153 (18%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSL L   G + + G + +GQLG    D           G+  V + ++         ++
Sbjct: 297 HSLILCHDGTLLSAGSNIYGQLGRSKQDL----------GMKPVDITES--------PIS 338

Query: 66  STTGLWHSLALNDCGE--VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG 123
              GL HSLA+ + GE  + +WG +   QLG      K +++P+ V+G    S     AG
Sbjct: 339 IAAGLGHSLAICNRGERNILSWGWNRSRQLGR----GKPENLPREVEGFDGESPASVSAG 394

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN 156
             H L +T  G         GCG +   G+ S+
Sbjct: 395 RVHSLCVTEKGEAWVW----GCGKNGRLGLGSS 423


>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
 gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
          Length = 406

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 123/262 (46%), Gaps = 33/262 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LA+   GEV +WG + +GQLGL   D +   +P++++    + +    AG  H   +T
Sbjct: 132 HCLAVTMEGEVQSWGRNQNGQLGL--GDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVT 189

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                         G+++ WG   +G LGL   D+  + +P+RV       +     G+ 
Sbjct: 190 ED------------GDLYGWGWGRYGNLGL--GDRTDRLVPERVTSTGGEKMSMVACGWR 235

Query: 126 HCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTIT----------SLNSP 171
           H + ++ SG +       + + G G      +   L   S++ I+          +L S 
Sbjct: 236 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD 295

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G+LY WG N++GQ+G+ N N     P +V    +  +  ++CG  H+  +++  + ++A+
Sbjct: 296 GKLYGWGWNKFGQVGVGN-NLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTER-NNVFAW 353

Query: 232 GIGSAVQLDSPKSVHKT-PQLI 252
           G G+  QL   +SV +  P++I
Sbjct: 354 GRGTNGQLGIGESVDRNFPKII 375



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 31/248 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HS+AL     V +WG    GQLG    D + +  P ++  L    +V    G  H  V  
Sbjct: 27  HSVALLSGDIVCSWGRGEDGQLG--HGDAEDRPSPTQLSALDGHQIVSVTCGADHT-VAY 83

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
           S +G+          EV++WG    G+LG  ++      +P  +K L  + + Q   G S
Sbjct: 84  SQSGM----------EVYSWGWGDFGRLGHGNSSDLFTPLP--IKALHGIRIKQIACGDS 131

Query: 126 HCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITSLNSP 171
           HCL +T  G V    +      G G              +G++  +V        ++   
Sbjct: 132 HCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED 191

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G+LY WG   YG +G+ +    +  P+RV S     ++++ACG  H+  +S S + LY +
Sbjct: 192 GDLYGWGWGRYGNLGLGDRTDRLV-PERVTSTGGEKMSMVACGWRHTISVSYSGA-LYTY 249

Query: 232 GIGSAVQL 239
           G     QL
Sbjct: 250 GWSKYGQL 257


>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
           PN500]
          Length = 1626

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 116/273 (42%), Gaps = 33/273 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  H   ++  G++FTWG   +G+LG    D++S S PK+V  LA++ +     G    
Sbjct: 136 AGAAHIAMISQSGKLFTWGEGQYGRLG--HGDEESISTPKQVVALANIPMKYVFCGGRST 193

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
           + L+ T G            ++TWG +  GQLG          +P+ V    +  +V   
Sbjct: 194 IALSHTAG----------SGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKRLVALD 243

Query: 122 AGYSHCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQD--SHTTIT--------- 166
           AG S   V+ SSG +       H   G G D     Q  LV     H  +          
Sbjct: 244 AGASRAAVIDSSGALFTWGRGDHGRLGHG-DTENRYQPTLVSSLYGHVVVAVALGGGHSL 302

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLP-IALIACGANHSFVLSKSV 225
           +L   GEL++WG  E GQ+G  +  +    P++++  V++P I  I+ G  HS V     
Sbjct: 303 ALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHS-VAQLDD 361

Query: 226 SRLYAFGIGSAVQL---DSPKSVHKTPQLIHGP 255
             +YA+G+     L   DS       PQ I  P
Sbjct: 362 GSVYAWGMSDYGILGTGDSDDGAINIPQRILMP 394



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 36/279 (12%)

Query: 58  YSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSV 117
           Y    ++    G  H   ++  G++FTWG   +G+LG    D++S S PK+V  LA++ +
Sbjct: 126 YPEERIILVNAGAAHIAMISQSGKLFTWGEGQYGRLG--HGDEESISTPKQVVALANIPM 183

Query: 118 VQACAGYSHCLVLT---SSGVVTCTHKENG------CGSD----PSQ----GVQSNLVQD 160
                G    + L+    SG+ T  + E G      CG D    P      G +  +  D
Sbjct: 184 KYVFCGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKRLVALD 243

Query: 161 SHTTITS-LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
           +  +  + ++S G L+TWG  ++G++G  ++     +P  V SL    +  +A G  HS 
Sbjct: 244 AGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRY-QPTLVSSLYGHVVVAVALGGGHSL 302

Query: 220 VLSKSVSRLYAFGIGSAVQL--DSPKSVHKTPQ----LIHGPWIASPVAMTAGEDSLVSH 273
            L+K+   L+++G G   QL   S +S    P+     +  P I   + ++AG    V+ 
Sbjct: 303 ALTKA-GELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKI---IGISAGGYHSVAQ 358

Query: 274 SGGLVVKKIYSGG--DHSIVTVTKSSDGVLSDDFRVLNP 310
              L    +Y+ G  D+ I+    S DG ++   R+L P
Sbjct: 359 ---LDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMP 394



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 16/144 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HSLAL   GE+F+WG   +GQLG  S  +  Q  PK+++    +  +   +      
Sbjct: 297 GGGHSLALTKAGELFSWGRGENGQLGHGSY-QSQQLAPKQLQFFVDMPKIIGISA----- 350

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                 G +HS+A  D G V+ WG   +G LG   +D  + +IP+R+     +       
Sbjct: 351 ------GGYHSVAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIRFKTISC 404

Query: 123 GYSHCLVLTSSGVVTCTHKENGCG 146
           G+ H + LTS   +       GCG
Sbjct: 405 GFQHTVALTSDNTIYSW----GCG 424



 Score = 47.8 bits (112), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 21/144 (14%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G +HS+A  D G V+ WG   +G LG   +D  + +IP+R+     +       G+ H 
Sbjct: 350 AGGYHSVAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIRFKTISCGFQHT 409

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ------SIPKRVKGLASV 115
           + LTS               +++WG    G+LG  + ++K+Q      +IP     + S 
Sbjct: 410 VALTSDN------------TIYSWGCGLGGRLG--TFNEKNQCAPIACNIPNYQPVVFSA 455

Query: 116 SVVQACA-GYSHCLVLTSSGVVTC 138
             +     G  + +V TSSG+ + 
Sbjct: 456 GEISTIVIGKKNTVVATSSGLTST 479


>gi|70949528|ref|XP_744165.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56524006|emb|CAH74665.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
          Length = 426

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 141/307 (45%), Gaps = 46/307 (14%)

Query: 14  GEVFTWGGDTHGQLG--LESADKKSQSI---PKRVK-GLASVSVVQACAGYSHCLVLTST 67
           G+++T+G +  GQLG  L +   K   I   P+ ++    S+     C GY H L +   
Sbjct: 89  GKIYTYGLNDKGQLGRTLSNEGGKESKISLTPEEIELDDKSIKFKDVCCGYKHTLAVDEN 148

Query: 68  TGLWHSLALNDCGEVFTWGGDT-HGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGY 124
             L+           + WGG+   G  GL   +K +   PK+++   +     +  C G 
Sbjct: 149 NDLYS----------WGWGGNFFKGASGLGQGNKNNLMKPKKIEAFNNDNSEFINICCGE 198

Query: 125 SHCLVLTSSG-VVTCTHKENGCGSDPSQG-----------VQSNLV-QD---SHTTITSL 168
            H L LT SG V  C   E G     + G           V +N++ +D    ++   +L
Sbjct: 199 QHSLALTKSGKVYGCGKGEFGRLGKGNHGDQLFFEEIDYFVNNNIIIKDIACGNSFSAAL 258

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTK----PQRVE--SLVNLPIALIACGANHSFVLS 222
           ++ GE+Y WG N+YGQ+GI NS   +      P +V+   + N+ I LIACG NH    S
Sbjct: 259 SNNGEVYVWGRNDYGQLGIENSIGDLYSHEVYPNKVKYFEIENIKIKLIACGDNHMIACS 318

Query: 223 KSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKI 282
           +S + +Y +G  + ++   PK++   P+  +     +   + AG +S   +S  L   K+
Sbjct: 319 ES-NIIYFWGSRAWLE---PKAITLNPKYQNSLIKKNIDKVQAGGNSYY-YSMLLSDNKL 373

Query: 283 YSGGDHS 289
           YS G ++
Sbjct: 374 YSWGKYN 380



 Score = 44.3 bits (103), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 52/186 (27%)

Query: 3   GLWHSLALNDCGEVFTWGGDTH---GQLGLESADKKSQSIPKRVKGLA--SVSVVQACAG 57
           G  H+LA+++  ++++WG   +   G  GL   +K +   PK+++     +   +  C G
Sbjct: 138 GYKHTLAVDENNDLYSWGWGGNFFKGASGLGQGNKNNLMKPKKIEAFNNDNSEFINICCG 197

Query: 58  YSHCLVLTSTTGLWH------------------------------------------SLA 75
             H L LT +  ++                                           S A
Sbjct: 198 EQHSLALTKSGKVYGCGKGEFGRLGKGNHGDQLFFEEIDYFVNNNIIIKDIACGNSFSAA 257

Query: 76  LNDCGEVFTWGGDTHGQLGLESA--DKKSQSI-PKRVK--GLASVSVVQACAGYSHCLVL 130
           L++ GEV+ WG + +GQLG+E++  D  S  + P +VK   + ++ +     G +H +  
Sbjct: 258 LSNNGEVYVWGRNDYGQLGIENSIGDLYSHEVYPNKVKYFEIENIKIKLIACGDNHMIAC 317

Query: 131 TSSGVV 136
           + S ++
Sbjct: 318 SESNII 323


>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
 gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
          Length = 1020

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 106/242 (43%), Gaps = 49/242 (20%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHC 61
           G WHS      G+VFT+G  T G LG     +++   PK V+ L+    ++ AC      
Sbjct: 370 GSWHSALTTSSGKVFTFGDGTFGALG--HGKRETVGYPKEVEALSGFRTMKVAC------ 421

Query: 62  LVLTSTTGLWHSLALNDCG----------EVFTWGGDTHGQLGLESADKKSQSIPKRVKG 111
                  GLWHS A+ +            +++TWG     QLG    DK S+ +P  V+ 
Sbjct: 422 -------GLWHSAAIVESSNHVSINVISRKLYTWGAGDKNQLG--HGDKDSRLVPTCVQS 472

Query: 112 LASVSVVQACAGYSHCLVLTSSG-VVTCTHKENG-CGSDPSQGVQSNLVQDSHTT----- 164
           L   S  Q   G+S  + L++SG V T     NG  G+  S G Q   VQD  +      
Sbjct: 473 LIDYSFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGNPKSDGKQPIPVQDRLSGELVEE 532

Query: 165 -------ITSLNSPGELYTWG---NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACG 214
                  +  L S  E+YTWG   N   G  G+ +      KP  VE+L +  +  IACG
Sbjct: 533 ISCGSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKK----KPTLVEALKDRHVKSIACG 588

Query: 215 AN 216
           +N
Sbjct: 589 SN 590



 Score = 77.8 bits (190), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 45/248 (18%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
           G +H+ A+   G+++TWG D +  +GL  +    S  +PKRV G   +  VQ        
Sbjct: 315 GEFHTCAVTASGDLYTWG-DGYYNVGLLGNGAGASHWLPKRVSG--PLEGVQ-------- 363

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
            VL+ + G WHS      G+VFT+G  T G LG     +++   PK V+ L+    ++  
Sbjct: 364 -VLSVSCGSWHSALTTSSGKVFTFGDGTFGALG--HGKRETVGYPKEVEALSGFRTMKVA 420

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
            G  H   +  S                           +H +I  ++   +LYTWG  +
Sbjct: 421 CGLWHSAAIVES--------------------------SNHVSINVISR--KLYTWGAGD 452

Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
             Q+G  + ++ +  P  V+SL++     +ACG + +  LS S   ++  G  S  QL +
Sbjct: 453 KNQLGHGDKDSRLV-PTCVQSLIDYSFHQVACGHSMTIALSTS-GHVFTMGSSSNGQLGN 510

Query: 242 PKSVHKTP 249
           PKS  K P
Sbjct: 511 PKSDGKQP 518



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 18/126 (14%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           ++AL+  G VFT G  ++GQLG   +D K Q IP + + L+   V +   G  H  VLTS
Sbjct: 488 TIALSTSGHVFTMGSSSNGQLGNPKSDGK-QPIPVQDR-LSGELVEEISCGSCHVAVLTS 545

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG--Y 124
            +            EV+TWG   +G+LG    + K +  P  V+ L    V     G  +
Sbjct: 546 RS------------EVYTWGMGANGRLGHGGVEDKKK--PTLVEALKDRHVKSIACGSNF 591

Query: 125 SHCLVL 130
           + C+ +
Sbjct: 592 TTCICI 597


>gi|297792001|ref|XP_002863885.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297309720|gb|EFH40144.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 454

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 113/231 (48%), Gaps = 30/231 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESAD--KKSQSIPKRVKGLASVSVVQACAGYS 59
            G +HSLA+   GE++ WG +  GQLG  + D  + S+S PKRV+GL +V+V  A   ++
Sbjct: 89  AGHYHSLAVTFGGEIWAWGRNDEGQLGRIAVDSGRDSRSEPKRVEGLDNVNVRAA---FA 145

Query: 60  HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ 119
             +V         S A+ D G ++ WG    GQLGL     +++ +P RV+ LA+  VV+
Sbjct: 146 SGVV---------SAAIGDDGSLWVWGRSKRGQLGLGKGIIEAR-VPSRVETLAAEHVVK 195

Query: 120 ACAGYSHCLVLTSSG-VVTCTHKENGCGSDPSQGVQSNL--------VQDSHTTITSLNS 170
              G+ H L LT  G V    +  +G   +    ++++L        ++D H    +L +
Sbjct: 196 VSLGWGHALALTVDGKVFGWGYVADGRVGNVGLPLEASLLDSITDGSMKDQHAADLNLEA 255

Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
             +           M   N      +P  VE   N+ +A IACG++HS +L
Sbjct: 256 AEKKVV------EAMSKENDMPIAWEPCLVEETRNVKVADIACGSDHSLIL 300



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 90/214 (42%), Gaps = 59/214 (27%)

Query: 16  VFTWGGDTHGQLGLESADKKSQSI----PKRVKGLAS-VSVVQACAGYSHCLVLTSTTGL 70
           V ++G   HG LGL S+      +    P  V  L S +S + A              G 
Sbjct: 46  VMSFGDGNHGALGLSSSSIPGMGMDAYEPTVVSNLPSDISFISA--------------GH 91

Query: 71  WHSLALNDCGEVFTWGGDTHGQLGLESAD--KKSQSIPKRVKGLASVSVVQACAGYSHCL 128
           +HSLA+   GE++ WG +  GQLG  + D  + S+S PKRV+GL +V+V  A A      
Sbjct: 92  YHSLAVTFGGEIWAWGRNDEGQLGRIAVDSGRDSRSEPKRVEGLDNVNVRAAFA------ 145

Query: 129 VLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGIN 188
               SGVV+                             ++   G L+ WG ++ GQ+G+ 
Sbjct: 146 ----SGVVSA----------------------------AIGDDGSLWVWGRSKRGQLGLG 173

Query: 189 NSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
                   P RVE+L    +  ++ G  H+  L+
Sbjct: 174 KGIIEARVPSRVETLAAEHVVKVSLGWGHALALT 207



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 117/281 (41%), Gaps = 58/281 (20%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           S A+ D G ++ WG    GQLGL     +++ +P RV+ LA+  VV+   G+ H L LT 
Sbjct: 150 SAAIGDDGSLWVWGRSKRGQLGLGKGIIEAR-VPSRVETLAAEHVVKVSLGWGHALALTV 208

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLG-------------LESADKKSQSIPKRVKGLA 113
                        G+VF WG    G++G             +     K Q         A
Sbjct: 209 D------------GKVFGWGYVADGRVGNVGLPLEASLLDSITDGSMKDQHAADLNLEAA 256

Query: 114 SVSVVQACA-------GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
              VV+A +        +  CLV  +  V      +  CGSD             H+ I 
Sbjct: 257 EKKVVEAMSKENDMPIAWEPCLVEETRNVKVA---DIACGSD-------------HSLI- 299

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL-SKSV 225
            L   G L + G+N YGQ+G +  +  +T     ES    PI+ IA G  HS  + ++  
Sbjct: 300 -LCHDGTLLSSGSNIYGQLGRSKQDLGMTPVDITES----PIS-IAAGLGHSLAICNRDE 353

Query: 226 SRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAG 266
            ++ ++G   + QL   K  H  P+ + G    SP +++AG
Sbjct: 354 RKILSWGWNRSRQLGRGKPEH-LPREVEGFDGESPASVSAG 393



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 23/134 (17%)

Query: 2   TGLWHSLAL--NDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 59
            GL HSLA+   D  ++ +WG +   QLG      K + +P+ V+G    S     AG  
Sbjct: 340 AGLGHSLAICNRDERKILSWGWNRSRQLGR----GKPEHLPREVEGFDGESPASVSAGRV 395

Query: 60  HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGL-ESADKKSQSIPKRVKGLASVSVV 118
           H L +T              GE + WG   +G+LGL  S+D+    + + ++G     V+
Sbjct: 396 HSLCVTEK------------GEAWVWGCGKNGRLGLGSSSDEPEPMLLEDIEGC----VL 439

Query: 119 QACAGYSHCLVLTS 132
           Q  AG+ H L+L +
Sbjct: 440 QTVAGFDHSLILVA 453



 Score = 40.0 bits (92), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 28/153 (18%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSL L   G + + G + +GQLG    D           G+  V + ++         ++
Sbjct: 296 HSLILCHDGTLLSSGSNIYGQLGRSKQDL----------GMTPVDITES--------PIS 337

Query: 66  STTGLWHSLAL--NDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG 123
              GL HSLA+   D  ++ +WG +   QLG      K + +P+ V+G    S     AG
Sbjct: 338 IAAGLGHSLAICNRDERKILSWGWNRSRQLGR----GKPEHLPREVEGFDGESPASVSAG 393

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN 156
             H L +T  G         GCG +   G+ S+
Sbjct: 394 RVHSLCVTEKGEAWVW----GCGKNGRLGLGSS 422


>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
          Length = 1106

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 109/230 (47%), Gaps = 24/230 (10%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WH+  +   G++FT+G  T G LG    D+KS S+P+ ++ L  +  VQA  G  H  
Sbjct: 427 GPWHTAVVTSSGQLFTFGDGTFGALG--HGDRKSVSLPREIESLKGLRTVQAACGVWHTA 484

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +        S +    G++FTWG    G+LG    DK+S+ +P  V  L   +   AC 
Sbjct: 485 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG--HGDKESKLVPTCVVTLVEPNCQVAC- 541

Query: 123 GYSHCLVLTSSGVV----TCTHKENGCGSDPSQG-----VQSNLVQD-------SHTTIT 166
           G+S  + L+ SG V    +C + +   G+  + G     V+  L +            + 
Sbjct: 542 GHSMTVALSRSGHVYTMGSCVYGQ--LGNTQADGKLPIRVEGKLSKSFVEEIACGAYHVA 599

Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN 216
            L S  E++TWG    G++G  ++N   T P  VE+L +  +  IACG N
Sbjct: 600 VLTSRTEVFTWGKGANGRLGHGDTNDRNT-PTLVEALKDKQVKSIACGTN 648



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 124/278 (44%), Gaps = 45/278 (16%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQACAGYSHC 61
           G +H+ A+   G+++TWG  T+    L   ++ S  +PKRV G L  + V          
Sbjct: 372 GEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVS--------- 422

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
              + + G WH+  +   G++FT+G  T G LG    D+KS S+P+ ++ L  +  VQA 
Sbjct: 423 ---SISCGPWHTAVVTSSGQLFTFGDGTFGALG--HGDRKSVSLPREIESLKGLRTVQAA 477

Query: 122 AGYSHCLVLTSSGVVTCTHKENGCG-----SDPSQG------VQSNLVQD---------- 160
            G  H   +    V   +      G      D  +G       +S LV            
Sbjct: 478 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTLVEPNC 537

Query: 161 ----SHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLP-IALIACGA 215
                H+   +L+  G +YT G+  YGQ+G  N+      P RVE  ++   +  IACGA
Sbjct: 538 QVACGHSMTVALSRSGHVYTMGSCVYGQLG--NTQADGKLPIRVEGKLSKSFVEEIACGA 595

Query: 216 NHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
            H  VL+ S + ++ +G G+  +L    +  + TP L+
Sbjct: 596 YHVAVLT-SRTEVFTWGKGANGRLGHGDTNDRNTPTLV 632



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 5/87 (5%)

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           GE+++WG    G++G +  ++ V  P+ +ESL N  I L+ACG  H+  ++ S   LY +
Sbjct: 331 GEVFSWGEESGGRLG-HGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLS-GDLYTW 388

Query: 232 GIGS---AVQLDSPKSVHKTPQLIHGP 255
           G G+    +     +  H  P+ ++GP
Sbjct: 389 GDGTYNYGLLGHGNQVSHWVPKRVNGP 415



 Score = 41.2 bits (95), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 35/185 (18%)

Query: 80  GEVFTWGGDTHG--------QLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
           G+VF WG             Q+G     K    +PK ++    + V     G  H  ++T
Sbjct: 269 GDVFIWGEGMGDGVLGGGVHQVGSNFGVKMDSLLPKALESAVVLDVQNIACGGKHAALVT 328

Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQ------------------DSHTTITSLNSPGE 173
             G V    +E+  G     GV S++                    + HT   +L+  G+
Sbjct: 329 KQGEVFSWGEES--GGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLS--GD 384

Query: 174 LYTWGNN--EYGQMGINNSNTTVTKPQRVES-LVNLPIALIACGANHSFVLSKSVSRLYA 230
           LYTWG+    YG +G  N  +    P+RV   L  + ++ I+CG  H+ V++ S  +L+ 
Sbjct: 385 LYTWGDGTYNYGLLGHGNQVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSS-GQLFT 442

Query: 231 FGIGS 235
           FG G+
Sbjct: 443 FGDGT 447


>gi|379720536|ref|YP_005312667.1| BNR repeat-containing protein [Paenibacillus mucilaginosus 3016]
 gi|378569208|gb|AFC29518.1| BNR repeat domain-containing protein [Paenibacillus mucilaginosus
           3016]
          Length = 686

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 130/283 (45%), Gaps = 32/283 (11%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           HSLAL   G V+ WG + +G LG +      +  P +V+GL+  SVV   A +S      
Sbjct: 92  HSLALKSDGTVWAWGQNEYGVLGEDPYKTSWRLTPVQVQGLS--SVVAISANFS------ 143

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS--IPKRVKGLASVSVVQACAG 123
                 H+LAL   G V+ WG +  GQLG  +      S   P +V+GL SV  V A  G
Sbjct: 144 ------HNLALKSDGTVWAWGMNNAGQLGNGTTSDMYTSFYTPSQVQGLDSVIAVAAGPG 197

Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPS-------QGVQSNLVQDSHTTITSLNSPGELYT 176
            S  L L S G +       G G+  S       QG+ S +  D+  +   + S G ++ 
Sbjct: 198 TS--LALKSDGTLWAWGGLVGDGTTESRSTPVQAQGLSSVVSFDAGDSRFVVKSDGTVWA 255

Query: 177 WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
           WG N YGQ+G + + TT   P  ++ L +  +A  A    HS  L KS   ++ +G  S 
Sbjct: 256 WGWNGYGQLG-DGTTTTRYTPVPLQELSS--VAAFAADEWHSLAL-KSDGTVWEWGCNSK 311

Query: 237 VQLDSPKSVHKTPQLIHGPWIASPVAMTAG-EDSLVSHSGGLV 278
            ++     +  TP  +    ++S V + AG E SL   S G V
Sbjct: 312 GEMCYESDIRTTPVQVQD--LSSAVDIAAGFEHSLAVKSDGTV 352



 Score = 70.5 bits (171), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 118/297 (39%), Gaps = 74/297 (24%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G +HSLAL + G V+ WG D+     L +    S + P +VK L  V  V A        
Sbjct: 42  GRFHSLALKEDGTVWAWGKDS-----LGNGTPYSSATPVQVKDLEEVVTVAAGGN----- 91

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
                    HSLAL   G V+ WG + +G LG +      +  P +V+GL+  SVV   A
Sbjct: 92  ---------HSLALKSDGTVWAWGQNEYGVLGEDPYKTSWRLTPVQVQGLS--SVVAISA 140

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
            +SH L L S G V                                      + WG N  
Sbjct: 141 NFSHNLALKSDGTV--------------------------------------WAWGMNNA 162

Query: 183 GQMGINNSN---TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
           GQ+G   ++   T+   P +V+ L +  +  +A G   S  L KS   L+A+G    +  
Sbjct: 163 GQLGNGTTSDMYTSFYTPSQVQGLDS--VIAVAAGPGTSLAL-KSDGTLWAWG---GLVG 216

Query: 240 DSPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG----GDHSIVT 292
           D       TP    G  ++S V+  AG+   V  S G V    ++G    GD +  T
Sbjct: 217 DGTTESRSTPVQAQG--LSSVVSFDAGDSRFVVKSDGTVWAWGWNGYGQLGDGTTTT 271



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 91/229 (39%), Gaps = 56/229 (24%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQS--IPKRVKGLASVSVVQACAGYSHCLV 63
           H+LAL   G V+ WG +  GQLG  +      S   P +V+GL SV  V A  G S  L 
Sbjct: 144 HNLALKSDGTVWAWGMNNAGQLGNGTTSDMYTSFYTPSQVQGLDSVIAVAAGPGTSLALK 203

Query: 64  LTSTTGLWHSLA-------------------------------LNDCGEVFTWGGDTHGQ 92
              T   W  L                                +   G V+ WG + +GQ
Sbjct: 204 SDGTLWAWGGLVGDGTTESRSTPVQAQGLSSVVSFDAGDSRFVVKSDGTVWAWGWNGYGQ 263

Query: 93  LGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQG 152
           LG  +   +   +P  ++ L+SV+     A   H L L S G V     E GC S     
Sbjct: 264 LGDGTTTTRYTPVP--LQELSSVAAF--AADEWHSLALKSDGTV----WEWGCNSKGEMC 315

Query: 153 VQSNL------VQDSHTTIT---------SLNSPGELYTWGNNEYGQMG 186
            +S++      VQD  + +          ++ S G ++ WGNN YGQMG
Sbjct: 316 YESDIRTTPVQVQDLSSAVDIAAGFEHSLAVKSDGTVWAWGNNGYGQMG 364



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 19/112 (16%)

Query: 5   WHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
           WHSLAL   G V+ WG ++ G++  ES     ++ P +V+ L+  S V   AG+      
Sbjct: 292 WHSLALKSDGTVWEWGCNSKGEMCYES---DIRTTPVQVQDLS--SAVDIAAGFE----- 341

Query: 65  TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
                  HSLA+   G V+ WG + +GQ+G   A +   S P +V GL   S
Sbjct: 342 -------HSLAVKSDGTVWAWGNNGYGQMG--DAARTYHSTPIQVLGLGEPS 384



 Score = 44.3 bits (103), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 22/166 (13%)

Query: 117 VVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTIT---------S 167
           V    AG  H L L   G V    K++     P        V+D    +T         +
Sbjct: 36  VTMVAAGRFHSLALKEDGTVWAWGKDSLGNGTPYSSATPVQVKDLEEVVTVAAGGNHSLA 95

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVT-KPQRVESLVNLPIALIACGANHSFVLS-KSV 225
           L S G ++ WG NEYG +G +   T+    P +V+ L     +++A  AN S  L+ KS 
Sbjct: 96  LKSDGTVWAWGQNEYGVLGEDPYKTSWRLTPVQVQGLS----SVVAISANFSHNLALKSD 151

Query: 226 SRLYAFGIGSAVQLDSPKSVHK-----TPQLIHGPWIASPVAMTAG 266
             ++A+G+ +A QL +  +        TP  + G  + S +A+ AG
Sbjct: 152 GTVWAWGMNNAGQLGNGTTSDMYTSFYTPSQVQG--LDSVIAVAAG 195


>gi|443697240|gb|ELT97775.1| hypothetical protein CAPTEDRAFT_180059 [Capitella teleta]
          Length = 453

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 113/278 (40%), Gaps = 60/278 (21%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G  HS+AL+  GE+F WG +  GQ+G  S    +Q  P++V          AC G   C+
Sbjct: 138 GSHHSMALSSEGEIFAWGQNNCGQVG--SGTTSNQPTPRKVT---------ACIGSKKCI 186

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +    G   S+A  D GEVF WG + +GQLGL   +  +Q  P R+  L +V + Q   
Sbjct: 187 SIA--CGQTSSIAAFDTGEVFGWGYNGNGQLGL--GNNINQPNPCRLVVLNNVFITQIAC 242

Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
           GY+H L LT  G                                       LY WG N Y
Sbjct: 243 GYAHTLGLTDEG--------------------------------------SLYAWGANSY 264

Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
           GQ+G  N    ++ P R+   +   + + A   NH         +++ +G      + SP
Sbjct: 265 GQLGTGNKANMIS-PVRIAVDLGRFVEIAATHYNHLSAALTQAGKVFMWGQCRGQSVTSP 323

Query: 243 -----KSVHKTPQLIHGPWIA-SPVAMTAGEDSLVSHS 274
                 S+H T      P +   P+ +   E+S V+ S
Sbjct: 324 LETKFGSMHDTFAYFGSPPVTYKPLEVGNMENSCVTES 361



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 14/122 (11%)

Query: 144 GCGSDPSQGVQSNLVQD------------SHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
           G GSD   G++   V+             S   + +  + GE+Y+WG+N Y Q+G  ++N
Sbjct: 56  GLGSDAMSGLEPRKVEQLCKKNIVSFAYGSGPHVLATTNAGEVYSWGHNGYCQLGNGSTN 115

Query: 192 TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQ 250
              T      SL+   I  IACG++HS  LS S   ++A+G  +  Q+ S  + ++ TP+
Sbjct: 116 QGPTPTPVTSSLLGKRITAIACGSHHSMALS-SEGEIFAWGQNNCGQVGSGTTSNQPTPR 174

Query: 251 LI 252
            +
Sbjct: 175 KV 176



 Score = 48.9 bits (115), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 90/233 (38%), Gaps = 68/233 (29%)

Query: 15  EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
           EV++ G +  G LGL S D  S   P++V+ L   ++V    G              H L
Sbjct: 43  EVYSLGSNCSGCLGLGS-DAMSGLEPRKVEQLCKKNIVSFAYGSGP-----------HVL 90

Query: 75  ALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-------KRVKGLASVSVVQACAGYSHC 127
           A  + GEV++WG + + QLG  S ++     P       KR+  +A              
Sbjct: 91  ATTNAGEVYSWGHNGYCQLGNGSTNQGPTPTPVTSSLLGKRITAIA-------------- 136

Query: 128 LVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGI 187
                            CGS  S                +L+S GE++ WG N  GQ+G 
Sbjct: 137 -----------------CGSHHSM---------------ALSSEGEIFAWGQNNCGQVGS 164

Query: 188 NNSNTTVTKPQRVESLVNLPIAL-IACGANHSFVLSKSVSRLYAFGIGSAVQL 239
             ++   T P++V + +     + IACG   S + +     ++ +G     QL
Sbjct: 165 GTTSNQPT-PRKVTACIGSKKCISIACGQTSS-IAAFDTGEVFGWGYNGNGQL 215


>gi|302824131|ref|XP_002993711.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
 gi|300138435|gb|EFJ05203.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
          Length = 991

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 106/233 (45%), Gaps = 19/233 (8%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
           G WH+  ++  G++FT+G  T G LG    DK++ +IPK V+ L  +  V+A  G  H  
Sbjct: 404 GAWHTALVSSAGQLFTFGDGTFGVLG--HGDKRNLAIPKEVESLKGLKTVRAACGIWHTA 461

Query: 63  VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
            +      + S      G++FTWG     +LG    DK+ + +P  V  L   +  Q   
Sbjct: 462 AVVEVIVGYSSATSCSSGKLFTWGDGDKYRLG--HGDKEQKLVPTCVAALVDYNFRQVAC 519

Query: 123 GYSHCLVLTSSGVVTCTHKE--NGCGSDPSQGVQSNLVQDSHTT------------ITSL 168
           G+S  + LT+SG V           G+  + G    +V                  + +L
Sbjct: 520 GHSLTVALTTSGRVFTMGSTIYGQLGNPKADGKVPGMVDGELARTFVEEIGCGAHHVAAL 579

Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVL 221
           +S  E+YTWG    G++G  +     T P  VE+L +  +  +ACG++ + V+
Sbjct: 580 SSKTEIYTWGKGANGRLGHGDVEDR-TAPTLVEALRDKQVKTVACGSSFTAVI 631



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 115/254 (45%), Gaps = 45/254 (17%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQ-ACAGYSH 60
           G +H+ A+   GE++TWG D      +  ++  S  +PKR+   L  V +   AC     
Sbjct: 349 GDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRISSIAC----- 403

Query: 61  CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
                   G WH+  ++  G++FT+G  T G LG    DK++ +IPK V+ L  +  V+A
Sbjct: 404 --------GAWHTALVSSAGQLFTFGDGTFGVLG--HGDKRNLAIPKEVESLKGLKTVRA 453

Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
             G  H   +                           V   +++ TS +S G+L+TWG+ 
Sbjct: 454 ACGIWHTAAVVE-------------------------VIVGYSSATSCSS-GKLFTWGDG 487

Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
           +  ++G  +    +  P  V +LV+     +ACG + +  L+ S  R++  G     QL 
Sbjct: 488 DKYRLGHGDKEQKLV-PTCVAALVDYNFRQVACGHSLTVALTTS-GRVFTMGSTIYGQLG 545

Query: 241 SPKSVHKTPQLIHG 254
           +PK+  K P ++ G
Sbjct: 546 NPKADGKVPGMVDG 559



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 95/215 (44%), Gaps = 39/215 (18%)

Query: 105 IPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCG---------SDPS----- 150
           +PK ++    + V     G  H  ++T  G V C  +E G           S+P      
Sbjct: 279 VPKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQAL 338

Query: 151 QGVQSNLVQ--DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT-KPQRVES-LVNL 206
            GV + LV   D HT   +L+  GELYTWG +      + +SN      P+R+ S L  +
Sbjct: 339 AGVNAELVACGDFHTCAVTLS--GELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGV 396

Query: 207 PIALIACGANHSFVLSKSVSRLYAFGIGS--------AVQLDSPKSVH-----KTPQLIH 253
            I+ IACGA H+ ++S S  +L+ FG G+           L  PK V      KT +   
Sbjct: 397 RISSIACGAWHTALVS-SAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAAC 455

Query: 254 GPW-IASPVAMTAGEDSLVSHSGGLVVKKIYSGGD 287
           G W  A+ V +  G  S  S S G    K+++ GD
Sbjct: 456 GIWHTAAVVEVIVGYSSATSCSSG----KLFTWGD 486


>gi|297841169|ref|XP_002888466.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334307|gb|EFH64725.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1005

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 100/232 (43%), Gaps = 27/232 (11%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLG---LESADKKSQSIPKRVKGLASVSVVQACAGYS 59
           G WH+  +   G++FT+G  T G LG   LES  K     PK V+ L  + V+    G  
Sbjct: 402 GAWHTAMVTSSGQLFTYGSRTFGVLGHGSLESVTK-----PKEVESLRRMKVISVSCGPW 456

Query: 60  HCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ 119
           H   +  T           CG++FTWG    G+LG   AD K + +P  V  L     ++
Sbjct: 457 HTAAIVETAIDRKFYNAKSCGKLFTWGDGDKGRLG--HADNKRKLVPTCVTELIDHDFIK 514

Query: 120 ACAGYSHCLVLTSSGVV----TCTHKENGCGSDPSQGVQ-----------SNLVQDSHTT 164
              G++  + L+ SG V    +  H + GC     + +             ++   SH  
Sbjct: 515 VSCGWTLTVALSVSGTVYTMGSSIHGQLGCPRAKDKSINVVLGNLTRQFVKDIASGSH-H 573

Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGAN 216
           +  L S G +YTWG    GQ+G+ +       P  VE L +  +  IACG N
Sbjct: 574 VAVLTSFGNVYTWGKGTNGQLGLGDVRDR-NSPVLVEPLGDRLVESIACGLN 624



 Score = 67.0 bits (162), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 109/294 (37%), Gaps = 77/294 (26%)

Query: 3   GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQ-ACAGYSHC 61
           G  H+  +   GEVF WG    G+LGL+         PKRV+ L  V+V   AC+ +  C
Sbjct: 299 GAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDH--PKRVESLEDVAVRSVACSDHQTC 356

Query: 62  LVLTS--------------------------------------TTGLWHSLALNDCGEVF 83
            V  S                                        G WH+  +   G++F
Sbjct: 357 AVTESGELYLWGIDGGTIEQSGSQFLTRKISDVLGGSLSIFSVACGAWHTAMVTSSGQLF 416

Query: 84  TWGGDTHGQLG---LESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTH 140
           T+G  T G LG   LES  K     PK V+ L  + V+    G  H   +  + +    +
Sbjct: 417 TYGSRTFGVLGHGSLESVTK-----PKEVESLRRMKVISVSCGPWHTAAIVETAIDRKFY 471

Query: 141 KENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRV 200
               C                          G+L+TWG+ + G++G +  N     P  V
Sbjct: 472 NAKSC--------------------------GKLFTWGDGDKGRLG-HADNKRKLVPTCV 504

Query: 201 ESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHG 254
             L++     ++CG   +  LS S + +Y  G     QL  P++  K+  ++ G
Sbjct: 505 TELIDHDFIKVSCGWTLTVALSVSGT-VYTMGSSIHGQLGCPRAKDKSINVVLG 557



 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 62/136 (45%), Gaps = 23/136 (16%)

Query: 7   SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
           ++AL+  G V+T G   HGQLG   A  KS ++   V G  +   V+  A  SH      
Sbjct: 522 TVALSVSGTVYTMGSSIHGQLGCPRAKDKSINV---VLGNLTRQFVKDIASGSH------ 572

Query: 67  TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
                H   L   G V+TWG  T+GQLGL   D + ++ P  V+ L    V     G   
Sbjct: 573 -----HVAVLTSFGNVYTWGKGTNGQLGL--GDVRDRNSPVLVEPLGDRLVESIACG--- 622

Query: 127 CLVLTSSGVVTCTHKE 142
            L LT++    C HKE
Sbjct: 623 -LNLTAA---ICLHKE 634


>gi|260826277|ref|XP_002608092.1| hypothetical protein BRAFLDRAFT_91430 [Branchiostoma floridae]
 gi|229293442|gb|EEN64102.1| hypothetical protein BRAFLDRAFT_91430 [Branchiostoma floridae]
          Length = 467

 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 16/189 (8%)

Query: 901  KVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRI 960
            K+ ++ FY   L  + D+  +Y  W +  P        C YP+I    AK  +L+ D   
Sbjct: 282  KIPHSHFYNSALDHI-DLMAEYMAWQN--PATHPGFSFCQYPYILSIAAKRKILQRDSEH 338

Query: 961  QMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVND 1020
            QM     ++      +   P     +L + V R  +V D++ E+ Q    D KK LKVN 
Sbjct: 339  QMIMNARRSLVQKVQRRQMPDMGMLFLNLNVRRSQLVSDSVNEIMQ-KRGDLKKKLKVN- 396

Query: 1021 TSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFE 1080
                       F GE   D GG+ +E+ +LLLK+I  P+YGMF   ++    WFS    +
Sbjct: 397  -----------FVGEPGLDMGGLTKEWFLLLLKQIFQPEYGMFTYDDKAHCYWFSSIKVD 445

Query: 1081 DQNMYFLIG 1089
            + + + L+G
Sbjct: 446  NYSEFHLVG 454


>gi|260941103|ref|XP_002614718.1| hypothetical protein CLUG_05496 [Clavispora lusitaniae ATCC 42720]
 gi|238851904|gb|EEQ41368.1| hypothetical protein CLUG_05496 [Clavispora lusitaniae ATCC 42720]
          Length = 1005

 Score = 83.6 bits (205), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 23/182 (12%)

Query: 910  PDLATVCDIRIDYFRWISGRPNGSTRDF-LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQ 968
            P L TV    +DY         GS   F LC YPF+     K ++LE + R QME    +
Sbjct: 579  PALQTV----LDYINGTDTMQQGSAYGFYLCQYPFLLTLGGKISILEYEARRQMERKAEE 634

Query: 969  TNFYLFLQTFNPH-TLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLA 1027
                 F+ + +    L+ Y  V + R+ IV+D++R + Q    + KK LKV         
Sbjct: 635  A----FITSLDRRVALDVYFRVRIRREYIVQDSLRCI-QLNPGNLKKSLKV--------- 680

Query: 1028 PQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFL 1087
               +F  E   DAGG+++E+ +LL + +  P  GM    +++  +WF+    E+  MY+L
Sbjct: 681  ---QFVNEPGVDAGGLKKEWFLLLTRALFSPSAGMLGNVDDSNFLWFNVIPVENAEMYYL 737

Query: 1088 IG 1089
             G
Sbjct: 738  FG 739



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 59/95 (62%), Gaps = 3/95 (3%)

Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKD 785
           +++  +WF+    E+  M +L G + GLAIYN TI+++ FP+ALYK +L  P+ L D KD
Sbjct: 717 DDSNFLWFNVIPVENAEMYYLFGAVLGLAIYNSTILDLKFPVALYKLLLGMPLGLADYKD 776

Query: 786 LSPTLAKSLQDILDYREPDLEDV---FGITFRNWY 817
           + P  A++L  + D+   DLE +   F +TF + +
Sbjct: 777 IFPVAAENLFKLRDFSPEDLEMLELTFEVTFHDAF 811


>gi|119189797|ref|XP_001245505.1| hypothetical protein CIMG_04946 [Coccidioides immitis RS]
          Length = 1673

 Score = 83.6 bits (205), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 21/214 (9%)

Query: 882  SAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRD---FL 938
            S+  R   N  +  P  G+   +   +M  ++T  +  +DY   I+      +R      
Sbjct: 1198 SSHRRRSPNSASYPPLNGQHEVHDHLHMIPISTFYNTLLDYSDLITDFEAWESRTGKFTF 1257

Query: 939  CNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVE 998
            C Y F     AK  +LE D R QME    +     F         +QYL ++V R+ +VE
Sbjct: 1258 CQYSFFLSIWAKIRILEHDARRQMEAKAREA---FFDNILGRRGTSQYLVLKVRRECLVE 1314

Query: 999  DTIR---ELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEI 1055
            D++R   E+      + KK L++            +F GEE  DAGG+R+E+ +LL++E+
Sbjct: 1315 DSLRGVSEVVGSGQEEIKKGLRI------------EFVGEEGVDAGGLRKEWFLLLVREV 1362

Query: 1056 LDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             DP  G F    ++R  +F+   FE    +FL+G
Sbjct: 1363 FDPLNGSFLYDNDSRYCYFNPYCFESSEQFFLVG 1396



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 17/99 (17%)

Query: 727  ETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL------DEPIL- 779
            ++R  +F+   FE     FL+G + GLAIYN TI+++ FP   ++K+L      + P L 
Sbjct: 1375 DSRYCYFNPYCFESSEQFFLVGVVLGLAIYNSTILDVAFPPFAFRKLLASARPNNVPTLS 1434

Query: 780  ---------LQDLKDLSPTLAKSLQDILDYREPDLEDVF 809
                     L DL +  P LAK L+ +L+Y + D+E+ F
Sbjct: 1435 TPYQPFRCTLDDLAEYRPALAKGLRQLLEY-DGDVEETF 1472


>gi|392868401|gb|EAS34185.2| ubiquitin-protein ligase [Coccidioides immitis RS]
          Length = 1239

 Score = 83.6 bits (205), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 21/214 (9%)

Query: 882  SAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRD---FL 938
            S+  R   N  +  P  G+   +   +M  ++T  +  +DY   I+      +R      
Sbjct: 764  SSHRRRSPNSASYPPLNGQHEVHDHLHMIPISTFYNTLLDYSDLITDFEAWESRTGKFTF 823

Query: 939  CNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVE 998
            C Y F     AK  +LE D R QME    +     F         +QYL ++V R+ +VE
Sbjct: 824  CQYSFFLSIWAKIRILEHDARRQMEAKAREA---FFDNILGRRGTSQYLVLKVRRECLVE 880

Query: 999  DTIR---ELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEI 1055
            D++R   E+      + KK L++            +F GEE  DAGG+R+E+ +LL++E+
Sbjct: 881  DSLRGVSEVVGSGQEEIKKGLRI------------EFVGEEGVDAGGLRKEWFLLLVREV 928

Query: 1056 LDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
             DP  G F    ++R  +F+   FE    +FL+G
Sbjct: 929  FDPLNGSFLYDNDSRYCYFNPYCFESSEQFFLVG 962



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 17/103 (16%)

Query: 727  ETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKIL------DEPIL- 779
            ++R  +F+   FE     FL+G + GLAIYN TI+++ FP   ++K+L      + P L 
Sbjct: 941  DSRYCYFNPYCFESSEQFFLVGVVLGLAIYNSTILDVAFPPFAFRKLLASARPNNVPTLS 1000

Query: 780  ---------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
                     L DL +  P LAK L+ +L+Y + D+E+ F   F
Sbjct: 1001 TPYQPFRCTLDDLAEYRPALAKGLRQLLEY-DGDVEETFCQDF 1042


>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
          Length = 440

 Score = 83.6 bits (205), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 123/262 (46%), Gaps = 33/262 (12%)

Query: 6   HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
           H LA+   GEV +WG + +GQLGL   D +   +P++++    + +    AG  H   +T
Sbjct: 131 HCLAVTMEGEVQSWGRNQNGQLGL--GDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVT 188

Query: 66  STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
                         G+++ WG   +G LGL   D+  + +P+RV       +     G+ 
Sbjct: 189 ED------------GDLYGWGWGRYGNLGL--GDRTDRLVPERVTSTGGEKMSMVACGWR 234

Query: 126 HCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTIT----------SLNSP 171
           H + ++ SG +       + + G G      +   L   S++ I+          +L S 
Sbjct: 235 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD 294

Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
           G+LY WG N++GQ+G+ N N     P +V    +  +  ++CG  H+  +++  + ++A+
Sbjct: 295 GKLYGWGWNKFGQVGVGN-NLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTER-NNVFAW 352

Query: 232 GIGSAVQLDSPKSVHKT-PQLI 252
           G G+  QL   +SV +  P++I
Sbjct: 353 GRGTNGQLGIGESVDRNFPKII 374



 Score = 73.2 bits (178), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 31/252 (12%)

Query: 2   TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
            G  HS+AL     V +WG    GQLG    D + +  P ++  L    +V    G  H 
Sbjct: 22  AGASHSVALLSGDIVCSWGRGEDGQLG--HGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79

Query: 62  LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
            V  S +G+          EV++WG    G+LG  ++      +P  +K L  + + Q  
Sbjct: 80  -VAYSQSGM----------EVYSWGWGDFGRLGHGNSSDLFTPLP--IKALHGIRIKQIA 126

Query: 122 AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITS 167
            G SHCL +T  G V    +      G G              +G+   +V        +
Sbjct: 127 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAA 186

Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
           +   G+LY WG   YG +G+ +    +  P+RV S     ++++ACG  H+  +S S   
Sbjct: 187 VTEDGDLYGWGWGRYGNLGLGDRTDRLV-PERVTSTGGEKMSMVACGWRHTISVSYS-GA 244

Query: 228 LYAFGIGSAVQL 239
           LY +G     QL
Sbjct: 245 LYTYGWSKYGQL 256


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.322    0.138    0.425 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,280,304,907
Number of Sequences: 23463169
Number of extensions: 780820054
Number of successful extensions: 1831404
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2070
Number of HSP's successfully gapped in prelim test: 4993
Number of HSP's that attempted gapping in prelim test: 1751307
Number of HSP's gapped (non-prelim): 35985
length of query: 1149
length of database: 8,064,228,071
effective HSP length: 154
effective length of query: 995
effective length of database: 8,745,867,341
effective search space: 8702138004295
effective search space used: 8702138004295
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 83 (36.6 bits)