BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16692
(1149 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 176 bits (447), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 131/409 (32%), Positives = 190/409 (46%), Gaps = 68/409 (16%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H+LALND G+V+ WG D+ GQLGL ++ + +P+ +K L+ + +VQ GY
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLVGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+HSLAL+ EVF WG + +GQLGL D K Q+ P+ +K L + +Q A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GTDCKKQTSPQLLKSLLGIPFMQVAA 197
Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
G +H VLT SG + + N S SQ + + HT
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
+L G ++T+G YGQ+G +NS + P++V L+ + IACG H+ S
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSG 314
Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSG 285
R+Y+FG+G QL + S K+P + G W DS VK+I+SG
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDS----EEYFCVKRIFSG 370
Query: 286 GDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLY 345
GD S + + DDFR NP QI VN E L Q L Y
Sbjct: 371 GDQSFSHYSSPQNCGPPDDFRCPNPTKQIWTVN-----------------EALIQKWLSY 413
Query: 346 ------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
++ F S GC+NGSFL V ND+H+ + +FS + ++
Sbjct: 414 PSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 156/291 (53%), Gaps = 47/291 (16%)
Query: 812 TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
NW+ ++ F +++ +FK+ +++LL+ + + FN L L+VL+ L+
Sbjct: 543 VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602
Query: 872 LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
+N + G+ + Y FY+ ++ + DIR DY W+ +
Sbjct: 603 VNEKM----------------------GQIIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640
Query: 932 GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
G + +C YPF+FDA+AKTTLL+ D +QM+ A++Q + F P
Sbjct: 641 GMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700
Query: 981 --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
++N L + V R+NIV D + L + D+KKPLKV F GE+A
Sbjct: 701 VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748
Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ LIG
Sbjct: 749 DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHLIG 799
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 59/278 (21%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
GL H++ + D G V+T G + GQLG E + KK P++V L + ++V G +H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+LALND G+V+ WG D+ GQLGL +++ +P+ +K L+ + +VQ
Sbjct: 96 ----------TLALNDKGQVYAWGLDSDGQLGLVGSEE-CIRVPRNIKSLSDIQIVQVAC 144
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
GY H L L+ + V C WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166
Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
GQ+G+ T PQ ++SL+ +P +A G HSFVL+ S ++ +G QL +
Sbjct: 167 GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225
Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
++ P L+ V + GED + ++ GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
PK G+ Y YE++R IWFS+ TFED ++ LIG +CGLAIYN TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNCTIVDLHFPLALYKK 823
Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
+L + L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 864
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
++ F S GC+NGSFL V ND+H+ ++ GVDM + + + + + + V+
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483
Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
+ +L+ L ++ PD EALR +LTLP + + +PF AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTAL 533
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 193/411 (46%), Gaps = 72/411 (17%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H+LALND G+V+ WG D+ GQLGL+ ++ + +P+ +K L+ + +VQ GY
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+HSLAL+ EVF WG + +GQLGL D + Q+ P+ +K L + +Q A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIDCQKQTSPQLIKSLLGIPFMQVAA 197
Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
G +H VLT SG + + N S SQ + + HT
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
+L G ++T+G YGQ+G +NS + P++V L+ + +ACG H+ S
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSG 314
Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIA--SPVAMTAGEDSLVSHSGGLVVKKIY 283
R+Y+FG+G QL + S K+P + G W + G + VK+I+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIGSEDY------FCVKRIF 368
Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLL 343
SGGD S + + DDFR +P+ QI VN E L Q L
Sbjct: 369 SGGDQSFSHYSSPQNCGPPDDFRCSDPSKQIWTVN-----------------EALIQKWL 411
Query: 344 LY------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
Y ++ F S GC+NGSFL + ND+H+ + +FS + ++
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAISNDDHYRTGT-RFSGVDMN 461
Score = 170 bits (430), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 167/344 (48%), Gaps = 88/344 (25%)
Query: 812 TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
NW+ ++ F +++ +FK+ +++LL+ + + FN L L+VL+ L+
Sbjct: 543 VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602
Query: 872 LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
+N +T G+ + Y FY+ ++ + DIR DY W+ +
Sbjct: 603 VNEKT----------------------GQLIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640
Query: 932 GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
G +C YPF+FDA+AKTTLL+ D +QM+ A++Q + F P
Sbjct: 641 GVDVSHGVTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700
Query: 981 --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
++N L + V R+NIV D + L + D+KKPLKV F GE+A
Sbjct: 701 VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748
Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L
Sbjct: 749 DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797
Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
IG +CGLAIYN+T+
Sbjct: 798 ------------------------------IGVICGLAIYNFTI 811
Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 129/278 (46%), Gaps = 59/278 (21%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
GL H++ + D G V+T G + GQLG E + KK P++V L + ++V G +H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVACGEAH-- 95
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+LALND G+V+ WG D+ GQLGL+ +++ +P+ +K L+ + +VQ
Sbjct: 96 ----------TLALNDKGQVYAWGLDSDGQLGLQGSEE-CIRVPRNIKSLSDIQIVQVAC 144
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
GY H L L+ + V C WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166
Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
GQ+G+ T PQ ++SL+ +P +A G HSFVL+ S ++ +G QL +
Sbjct: 167 GQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225
Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
++ P L+ V + GED + ++ GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
PK G+ Y YE++R IWFS+ TFED ++ LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823
Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
+L L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKRKPSLDDLKELMPAVGRSMQQLLDYPEDDIEETFCLNF 864
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
++ F S GC+NGSFL + ND+H+ ++ GVDM + + + + + + V+
Sbjct: 426 IDGTFSSSGCLNGSFLAISNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVA-- 483
Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
+ +L+ L ++ PD EALR +LTLP + + +PF AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDCNNFTTIAIPFGTAL 533
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 174 bits (440), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 192/411 (46%), Gaps = 72/411 (17%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H+LALND G+V+ WG D+ GQLGL+ ++ + +P+ +K L+ + +VQ GY
Sbjct: 92 GEAHTLALNDKGQVYAWGLDSDGQLGLQGSE-ECIRVPRNIKSLSDIQIVQVACGY---- 146
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+HSLAL+ EVF WG + +GQLGL + + Q+ P+ +K L + +Q A
Sbjct: 147 --------YHSLALSKASEVFCWGQNKYGQLGL-GIECQKQTSPQLIKSLLGIPFMQVAA 197
Query: 123 GYSHCLVLTSSGVV----------------TCTHKENGCGSDPSQGVQSNLVQDSHTTIT 166
G +H VLT SG + + N S SQ + + HT
Sbjct: 198 GGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT--A 255
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
+L G ++T+G YGQ+G +NS + P++V L+ + IACG H+ S
Sbjct: 256 ALTKEGGVFTFGAGGYGQLG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSG 314
Query: 227 RLYAFGIGSAVQLDS-PKSVHKTPQLIHGPWIA--SPVAMTAGEDSLVSHSGGLVVKKIY 283
R+Y+FG+G QL + S K+P + G W + G + VK+I+
Sbjct: 315 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIGSEDY------FCVKRIF 368
Query: 284 SGGDHSIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLL 343
SGGD S + DDFR +P+ QI VN E L Q L
Sbjct: 369 SGGDQSFSHYSSPQSCGPPDDFRRSDPSKQIWTVN-----------------EALIQKWL 411
Query: 344 LY------------LETVFLSPGCMNGSFLQVENDEHFSCNSKKFSFIKLS 382
Y ++ F S GC+NGSFL V ND+H+ + +FS + ++
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGT-RFSGVDMN 461
Score = 169 bits (429), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 166/344 (48%), Gaps = 88/344 (25%)
Query: 812 TFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNS 871
NW+ ++ F +++ +FK+ +++LL+ + + FN L L+VL+ L+
Sbjct: 543 VLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEILHR 602
Query: 872 LNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPN 931
+N T G+ + Y FY+ ++ + DIR DY W+ +
Sbjct: 603 VNERT----------------------GQLIQYDKFYIHEVQELIDIRNDYINWVQQQAY 640
Query: 932 GSTRDF-----------LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP 980
G +C YPF+FDA+AKTTLL+ D +QM+ A++Q + F P
Sbjct: 641 GVDVSHGITELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLP 700
Query: 981 --HTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAE 1038
++N L + V R+NIV D + L + D+KKPLKV F GE+A
Sbjct: 701 VIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKV------------IFVGEDAV 748
Query: 1039 DAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYI 1098
DAGGVR+EF +L+++E+LDPKYGMF+ YE++R IWFS+ TFED +++ L
Sbjct: 749 DAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHL----------- 797
Query: 1099 SKYSMFKEYEETRSIWFSEDTFEDQNMYFLIGTLCGLAIYNYTV 1142
IG +CGLAIYN+T+
Sbjct: 798 ------------------------------IGVICGLAIYNFTI 811
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 129/278 (46%), Gaps = 59/278 (21%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
GL H++ + D G V+T G + GQLG E + KK P++V L + ++V G +H
Sbjct: 42 GLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKK----PEQVVALDAQNIVAVSCGEAH-- 95
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+LALND G+V+ WG D+ GQLGL+ +++ +P+ +K L+ + +VQ
Sbjct: 96 ----------TLALNDKGQVYAWGLDSDGQLGLQGSEE-CIRVPRNIKSLSDIQIVQVAC 144
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
GY H L L+ + V C WG N+Y
Sbjct: 145 GYYHSLALSKASEVFC--------------------------------------WGQNKY 166
Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-S 241
GQ+G+ T PQ ++SL+ +P +A G HSFVL+ S ++ +G QL +
Sbjct: 167 GQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWGRNKFGQLGLN 225
Query: 242 PKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
++ P L+ V + GED + ++ GG+
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 713 PKNGINHYGITEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKK 772
PK G+ Y YE++R IWFS+ TFED ++ LIG +CGLAIYN+TI+++ FPLALYKK
Sbjct: 768 PKYGMFRY----YEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKK 823
Query: 773 ILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
+L L DLK+L P + +S+Q +LDY E D+E+ F + F
Sbjct: 824 LLKRKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNF 864
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
++ F S GC+NGSFL V ND+H+ ++ GVDM + + + + + + V+
Sbjct: 426 IDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHRLIQPDHPQISQQVA-- 483
Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
+ +L+ L ++ PD EALR +LTLP + + +PF AL
Sbjct: 484 --ASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDCNNFTTIAIPFGTAL 533
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 191/386 (49%), Gaps = 43/386 (11%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HSLAL+D G++F+WG + GQLGL + + S ++P+ ++ L +++Q
Sbjct: 95 HSLALSDRGQLFSWGAGSDGQLGLMTTE-DSVAVPRLIQKLNQQTILQV----------- 142
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+ G WH LAL G+ FTWG ++HGQLGL + SQ+ P+RV+ L + + Q AG +
Sbjct: 143 -SCGNWHCLALAADGQFFTWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAAGGA 200
Query: 126 HCLVLTSSGVV--------------TCTHKENGCGSD--PSQGVQSNLVQDSHTTITSLN 169
H L+ SG V +E+ C +Q V + HT + L
Sbjct: 201 HSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAV--LT 258
Query: 170 SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLY 229
G ++T+G GQ+G ++ N V P+RV L+ + IACG H+ S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 230 AFGIGSAVQLDSPKSVH-KTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDH 288
AFG G+ QL + + + K P + G W A ++A D H +VK+I+SGGD
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYH----IVKQIFSGGDQ 373
Query: 289 SIVTVTKSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDETLDQDLLLYLET 348
+ V +K + + DFR +N A +N E + +++ + + T++ +
Sbjct: 374 TFVLCSKYENYSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNANTING-----VVQ 428
Query: 349 VFLSPGCMNGSFLQVENDEHFSCNSK 374
+ S C NGSFL+ + DEHF + K
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPK 454
Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 149/285 (52%), Gaps = 48/285 (16%)
Query: 815 NWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQVLQKLNSLNN 874
NW+ + YF +L+ ++K ++YLL+ + FN ++ L++L+KL +N
Sbjct: 546 NWWSQVCPKYFMKLVNLYKGAVLYLLRGRKTFLIP---VLFNNYITAALKLLEKLYKVNL 602
Query: 875 ETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFRWISGRPNGST 934
+ + V Y FY+P+++ + DI+ DY W +
Sbjct: 603 KV-----------------------KHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKA 639
Query: 935 RD-------FLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNF--YLFLQTFNPH-TLN 984
R LC+YPFIFDA+AKT +L+ D +QM+ A+N N L T P +
Sbjct: 640 RPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARS 699
Query: 985 QYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVR 1044
+L + V R+N+V D +REL+ ++ D KKPLKV F GEEA DAGGV
Sbjct: 700 PFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKV------------IFDGEEAVDAGGVT 747
Query: 1045 REFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
+EF +LLLKE+L+P YGMF Y+++ +WFS+ F + N + LIG
Sbjct: 748 KEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIG 792
Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 131/275 (47%), Gaps = 59/275 (21%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS+ L + GEV+T G +T GQLG E K P+++ LA ++ G SH
Sbjct: 45 HSVFLLEDGEVYTCGLNTKGQLGHEREGNK----PEQIGALADQHIIHVACGESH----- 95
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
SLAL+D G++F+WG + GQLGL + + S ++P+ ++ L +++Q G
Sbjct: 96 -------SLALSDRGQLFSWGAGSDGQLGLMTTED-SVAVPRLIQKLNQQTILQVSCGNW 147
Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
HCL L + G + +TWG N +GQ+
Sbjct: 148 HCLALAADG--------------------------------------QFFTWGKNSHGQL 169
Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD-SPKS 244
G+ + PQRV SL +P+A +A G HSF LS S ++ +G+ +A QL S +
Sbjct: 170 GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS-GAVFGWGMNNAGQLGLSDEK 228
Query: 245 VHKTPQLIHGPWIASPVAMTAGED--SLVSHSGGL 277
++P + V ++ GE+ ++++ SGG+
Sbjct: 229 DRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263
Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 68/95 (71%), Gaps = 1/95 (1%)
Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ T Y+++ +WFS+ F + N LIG CGLAIYN T++++ FPLALYKK+L+
Sbjct: 763 YGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKP 822
Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
L+DLK+LSPT +SLQ++LDY D+E+ F + F
Sbjct: 823 GLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNF 857
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
+ S C NGSFL+ + DEHF + K PG+D+ + ++ + S S++ +
Sbjct: 429 ILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMN----SQHSMILEQILN 484
Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
+ + L+ L ++PPD EA+R++L LP + + + + L +P A A+
Sbjct: 485 SFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAI 533
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 125/255 (49%), Gaps = 56/255 (21%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS+A+ G+VF WG + GQLG+ K+ +P ++K LA + ++Q G+
Sbjct: 82 GKEHSVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMPTKIKALAGIKIIQVSCGH---- 136
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+HSLAL++ G VF+WG ++ GQLGL + +SQ+IP++VK L + + Q A
Sbjct: 137 --------YHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQAIPQKVKSLEGIPLAQVAA 187
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
G +H L+ +G + WG+N
Sbjct: 188 GGTHSFALSLTGTS--------------------------------------FGWGSNRS 209
Query: 183 GQMGI--NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
GQ+ + N + KP + +L NL + I+CG H+ VL++ +++ FG S+ QL
Sbjct: 210 GQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEE-GQVFTFGGNSSGQLQ 268
Query: 241 -SPKSVHKTPQLIHG 254
SP+S + PQLI G
Sbjct: 269 PSPRSGQRGPQLIEG 283
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 39/258 (15%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +HSLAL++ G VF+WG ++ GQLGL + +SQ+IP++VK L + + Q AG +H
Sbjct: 135 GHYHSLALSEDGHVFSWGRNSEGQLGL-GKNSRSQAIPQKVKSLEGIPLAQVAAGGTH-- 191
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQA 120
S AL+ G F WG + GQL L S +K + I P + L ++SV+
Sbjct: 192 ----------SFALSLTGTSFGWGSNRSGQLAL-SGNKVKEQIYKPHSIGALKNLSVIYI 240
Query: 121 CAGYSHCLVLT-----------SSGVVTCTHKENGCGSDPSQGVQSNLVQ---DSHTTIT 166
GY H VLT SSG + + + G +G+ + Q S+ TI
Sbjct: 241 SCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIA 300
Query: 167 SLNSPGELYTWG-------NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
+ + G++ + G N + + NS+ T E LV++ + I GA+ +F
Sbjct: 301 YVYTTGQVVSLGRGPSHTSNPTHQEAPAENSDITCLLA--AEDLVDIEVKDIFAGAHANF 358
Query: 220 VLSKSVSRLYAFGIGSAV 237
V ++ VS + G+ +
Sbjct: 359 VTTRRVSHTRSTGVSMKI 376
Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 56/254 (22%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
+G HSL L V++ G ++ GQLG + D+ ++ P+ ++ L + V G H
Sbjct: 29 SGEHHSLLLFSNHRVYSCGDNSWGQLG-QRRDQSTER-PEPIQALNDLHVDLVSCGKEH- 85
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
S+A+ G+VF WG + GQLG+ K+ +P ++K LA + ++Q
Sbjct: 86 -----------SVAVCHKGKVFAWGAGSEGQLGI-GEFKEISFMPTKIKALAGIKIIQVS 133
Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
G+ H L L+ G V ++WG N
Sbjct: 134 CGHYHSLALSEDGHV--------------------------------------FSWGRNS 155
Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
GQ+G+ ++ + PQ+V+SL +P+A +A G HSF LS + + +FG GS
Sbjct: 156 EGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGT---SFGWGSNRSGQL 212
Query: 242 PKSVHKTPQLIHGP 255
S +K + I+ P
Sbjct: 213 ALSGNKVKEQIYKP 226
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 60/83 (72%)
Query: 726 EETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKD 785
E+ S+WF + +++ FL G LCGL+++N +IN+PFPLALYKK+L++ L+DLK+
Sbjct: 726 EKGSSMWFPVNPKFEKSSYFLFGILCGLSLHNLKVINLPFPLALYKKLLNQKPSLEDLKE 785
Query: 786 LSPTLAKSLQDILDYREPDLEDV 808
LS L ++LQ++L+ D+E++
Sbjct: 786 LSLPLGRNLQEVLNCEAGDIEEL 808
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 24/154 (15%)
Query: 936 DFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDN 995
DFL F+FD +K L++ D +++ M++ + + P YL ++V R +
Sbjct: 619 DFL----FVFDLPSKIKLMKCDSFVKL---MSEVMAFPEKMSSPP-----YLILKVRRSH 666
Query: 996 IVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEI 1055
+VEDT+R+L Q D +K L V F E +AGGV EF + +E+
Sbjct: 667 LVEDTLRQLRQVEDFDLRKQLSVG------------FINEIRPEAGGVSSEFFHCIFEEM 714
Query: 1056 LDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
DPKY MF E+ S+WF + +++ YFL G
Sbjct: 715 TDPKYEMFIYPEKGSSMWFPVNPKFEKSSYFLFG 748
Score = 38.1 bits (87), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Query: 421 VFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNLAIL 480
+F S C+ SFL+ + + + VD++L +D + + + +S+L
Sbjct: 410 IFSSSACLTASFLKKRD----AGENNLIDVDLKLARDVFKKL------TTEKWISSLITT 459
Query: 481 ASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
+L++ L + P EAL +FL LP +P+ + L FA A+
Sbjct: 460 CLEEYLLRDLPYSSPHQEALLVFLLLPECSIMQDPKNWKTLAFEFAKAI 508
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 172/385 (44%), Gaps = 69/385 (17%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HSLA+ G VF WG + GQLG+ K+ PK++ L + ++Q G+
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIMTLNDIKIIQVSCGH---- 137
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+HSLAL+ +VF+WG ++HGQLGL + SQ+ P+RV+ L + + Q A
Sbjct: 138 --------YHSLALSKDSQVFSWGKNSHGQLGL-GKEFPSQASPQRVRSLEGIPLAQVAA 188
Query: 123 GYSHC-------------------LVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHT 163
G +H L L+ V ++K G+ + GV D+HT
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHT 248
Query: 164 TITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
+ L G+++T+G+N GQ+G + + PQ VE + L ++ I CG+ H+
Sbjct: 249 AV--LTQDGKVFTFGDNRSGQLGYSPTPEK-RGPQLVERIDGL-VSQIDCGSYHTLAYVH 304
Query: 224 SVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGED--SLVSHSG--GLVV 279
+ ++ +FG G + D+ K H P A+T D L+S + V
Sbjct: 305 TTGQVVSFGHGPS---DTSKPTH-------------PEALTENFDISCLISAEDFVDVQV 348
Query: 280 KKIYSGGDHSIVTVTK--SSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLKSDET 337
K I++G + VT + SS ++ +Q + + +K E E KS+
Sbjct: 349 KHIFAGTYANFVTTHQDTSSTRAPGKTLPEISRISQSMAEKWIAVKRRSTEHEMAKSE-- 406
Query: 338 LDQDLLLYLETVFLSPGCMNGSFLQ 362
+ +F SP C+ SFL+
Sbjct: 407 --------IRMIFSSPACLTASFLK 423
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 54/238 (22%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
+G HSL L V + G ++ GQLG A + +P+ ++ L ++
Sbjct: 30 SGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGE--LPEPIQALETL------------ 75
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
+V + G HSLA+ G VF WG + GQLG+ K+ PK++ L + ++Q
Sbjct: 76 IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGI-GEFKEISFTPKKIMTLNDIKIIQVS 134
Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
G+ H L L+ +DS ++++WG N
Sbjct: 135 CGHYHSLALS---------------------------KDS-----------QVFSWGKNS 156
Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
+GQ+G+ + PQRV SL +P+A +A G HSF LS + + +G SA QL
Sbjct: 157 HGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTS-FGWGSNSAGQL 213
Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ Y E S +WF ++ FL G LCGL+++N + N+PFPLALYKK+LD+
Sbjct: 733 YGMFMYPEMGSCMWFPAKPKPEKKRYFLFGMLCGLSLFNLNVANLPFPLALYKKLLDQKP 792
Query: 779 LLQDLKDLSPTLAKSLQDIL 798
L+DLK+LSP L KSLQ++L
Sbjct: 793 SLEDLKELSPRLGKSLQEVL 812
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 19/155 (12%)
Query: 940 NYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLF-----LQTFNPHTLNQYLEVEVSRD 994
++PFIF++ +K LL+ D I+M+ M++ Y+ LQ + + + V R
Sbjct: 622 DFPFIFNSLSKIKLLQADSHIKMQ--MSEKKAYMLMHETILQKKDEFPPSPRFILRVRRS 679
Query: 995 NIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKE 1054
+V+D +R+L+Q DF K L V +F E ++GGV EF + +E
Sbjct: 680 RLVKDALRQLSQAEATDFCKVLVV------------EFINEICPESGGVSSEFFHCMFEE 727
Query: 1055 ILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
+ P+YGMF E +WF ++ YFL G
Sbjct: 728 MTKPEYGMFMYPEMGSCMWFPAKPKPEKKRYFLFG 762
Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Query: 418 LETVFLSPGCMNGSFLQVENDEHFSCNSKNPGVDMQLCQDCYDTIARIERESVRSLVSNL 477
+ +F SP C+ SFL+ + + + VD+++ +D + + + E +S++
Sbjct: 407 IRMIFSSPACLTASFLKKRG----TGETTSIDVDLEMARDTFKKLTKKE------WISSM 456
Query: 478 AILASHAHLVKSLWNTPPDAEALRMFLTLPLYHEFMNPRQHEILHMPFAGAL 529
L+++L P EAL +FL LP + + + L +PFA A+
Sbjct: 457 ITTCLEDDLLRALPCHSPHQEALSVFLLLPECPVMHDSKNWKNLVVPFAKAV 508
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 159/366 (43%), Gaps = 86/366 (23%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +HSLAL+ GE+F WG + HGQLG+ S + P+ V+ LA V + Q AG +
Sbjct: 146 GDYHSLALSKGGELFAWGQNLHGQLGV-GRKFPSTTTPQIVEHLAGVPLAQISAGEA--- 201
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
HS+AL+ G +++WG + GQLGL + K P ++GL + V
Sbjct: 202 ---------HSMALSMSGNIYSWGKNECGQLGLGHTESKDD--PSLIEGLDNQKVEFVAC 250
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
G SH +LT G+ L+T+G ++
Sbjct: 251 GGSHSALLTQDGL--------------------------------------LFTFGAGKH 272
Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSP 242
GQ+G +NS +P V LV + IACG H+ + ++++FG G QL +
Sbjct: 273 GQLG-HNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 331
Query: 243 KSVHKTPQLIHGPWIASPVAMTAGED-SLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGV- 300
+ + L PV +++ E+ L SH+ + I +GG+ SI+ K +
Sbjct: 332 GTRDQLMPL--------PVKVSSSEELKLESHTSEKELIMI-AGGNQSILLWIKKENSYV 382
Query: 301 -LSDDFRVLNPAT---QILDVNFERLKECEREVEQLKSDETLDQDLLLYLETVFLSPGCM 356
L LN T I DV +R + +RE+++ +F SP C+
Sbjct: 383 NLKRTIPTLNEGTVKRWIADVETKRWQSTKREIQE-----------------IFSSPACL 425
Query: 357 NGSFLQ 362
GSFL+
Sbjct: 426 TGSFLR 431
Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Query: 720 YGITEYEETRS-IWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ Y E S +WF ++ F G LCGL+++N + N+PFPLAL+KK+LD+
Sbjct: 742 YGMFMYPEGASCMWFPVKPKFEKKRYFFFGVLCGLSLFNCNVANLPFPLALFKKLLDQMP 801
Query: 779 LLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
L+DLK+LSP L K+LQ +LD + E+VF I F
Sbjct: 802 SLEDLKELSPDLGKNLQTLLDDEGDNFEEVFYIHF 836
Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 117/290 (40%), Gaps = 42/290 (14%)
Query: 805 LEDVFGITFRNWYLLMSDDYFERLILIFKQCLIYLLQQPGVVDSTNGDITFNRKLSFCLQ 864
+ D + ++ + + F +L+ +FK +I L NG++ L+
Sbjct: 519 MSDQSSLVLEEYWATLQESTFSKLVQMFKTAVICQLDYWDESAEENGNV------QALLE 572
Query: 865 VLQKLNSLNNETLTSSISAGGRTVSNIRTPAPHGGRKVAYTAFYMPDLATVCDIRIDYFR 924
+L+KL+ +N ++ P +V + VC R +
Sbjct: 573 MLKKLHRVNQ----------------VKCQLPESIFQVDELLHRLNFFVEVCR-RYLWKM 615
Query: 925 WISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLN 984
+ N ++PFIF+ +K LL D +++E ++ YL +
Sbjct: 616 TVDASENVQCCVIFSHFPFIFNNLSKIKLLHTDTLLKIESKKHKA--YLRSAAIEEERES 673
Query: 985 QY-----LEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAED 1039
++ ++ V R++++ED + +L+Q+ D +K L V F GE D
Sbjct: 674 EFALRPTFDLTVRRNHLIEDVLNQLSQFENEDLRKEL------------WVSFSGEIGYD 721
Query: 1040 AGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
GGV++EF L E++ P+YGMF E +WF ++ YF G
Sbjct: 722 LGGVKKEFFYCLFAEMIQPEYGMFMYPEGASCMWFPVKPKFEKKRYFFFG 771
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 42/238 (17%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
G HS A+ + GE++TWG G+LG D S++IP VK +++V V +C G SH
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLG--HGDSNSRNIPTLVKDISNVGEV-SC-GSSHT 573
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
+ L+ D V+++GG +G+LG D PK ++ L + + + C
Sbjct: 574 IALS-----------KDGRTVWSFGGGDNGKLG--HGDTNRVYKPKVIEALQGMFIRKVC 620
Query: 122 AGYSHCLVLTSSGVV------TCTHKENGCGSDPSQGVQSNLVQ-------------DSH 162
AG L LTS+G V C GCGS + ++ L++ DSH
Sbjct: 621 AGSQSSLALTSTGQVYAWGCGACL----GCGSSEATALRPKLIEELAATRIVDVSIGDSH 676
Query: 163 TTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
+L+ E+Y WGNN GQ G NS +TKP++V L + I I+ G +HS
Sbjct: 677 --CLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 75/290 (25%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS+AL + GEVF+WG +G+LG ++D+ Q P++++ L VVQ G+ H V+T
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
S G++FT+G +G+LGL + K +P+RV L + Q G +
Sbjct: 4151 SD------------GKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLN 4196
Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
H L +++ G + ++ +G+ +YG++
Sbjct: 4197 HTLAVSADGSM-------------------------------------VWAFGDGDYGKL 4219
Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSV 245
G+ NS T + PQ+++ L + I +ACG S L+K +Y FG + L ++
Sbjct: 4220 GLGNS-TAKSSPQKIDVLCGIGIKKVACGTQFSVALTKD-GHVYTFGQDRLIGLPEGRAR 4277
Query: 246 -HKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVT 294
H PQ I P +A G++++ + G +H++ +
Sbjct: 4278 NHNRPQQI--PVLA-----------------GVIIEDVAVGAEHTLALAS 4308
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 53/240 (22%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G V G ++G+LG ++D L ++V+ A G+ ++TS HS
Sbjct: 4046 GTVLACGEGSYGRLGQGNSDD-----------LHVLTVISALQGFVVTQLVTSCGSDGHS 4094
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
+AL + GEVF+WG +G+LG ++D+ Q P++++ L VVQ G+ H V+TS
Sbjct: 4095 MALTESGEVFSWGDGDYGKLGHGNSDR--QRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4152
Query: 134 GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
G+L+T+GN +YG++G+ N++
Sbjct: 4153 --------------------------------------GKLFTFGNGDYGRLGLGNTSNK 4174
Query: 194 VTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLI 252
P+RV +L I +ACG NH+ +S S ++AFG G +L S K +PQ I
Sbjct: 4175 -KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKI 4233
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 114/259 (44%), Gaps = 34/259 (13%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS + G++FT+G +G+LGL + K +P+RV L + Q G +H L
Sbjct: 4142 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTL 4199
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+++ D V+ +G +G+LGL ++ KS P+++ L + + +
Sbjct: 4200 AVSA-----------DGSMVWAFGDGDYGKLGLGNSTAKSS--PQKIDVLCGIGIKKVAC 4246
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSN-----------LVQD-----SHTTIT 166
G + LT G V ++ G + N +++D HT
Sbjct: 4247 GTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHT--L 4304
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
+L S G++Y WG+N GQ+G+ ++N V +P V L + I+ G HS +
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTN-HVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4363
Query: 227 RLYAFGIGSAVQLDSPKSV 245
A G+ +QL P +V
Sbjct: 4364 PPRAPGVSVPLQLGLPDTV 4382
Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 134/335 (40%), Gaps = 89/335 (26%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
G + + ++ G V G ++G+LGL D +QS K++ S+ +
Sbjct: 410 AGQYCTFVISTDGSVRACGKGSYGRLGL--GDSNNQSTLKKLTFEPHRSIKK-------- 459
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG-LASVSVVQA 120
V +S H+LA GEVF+WG +G+LG + +Q PK ++G L VV
Sbjct: 460 -VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG--HGNSSTQKYPKLIQGPLQGKVVVCV 516
Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
AGY H +T G ELYTWG
Sbjct: 517 SAGYRHSAAVTEDG--------------------------------------ELYTWGEG 538
Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLD 240
++G++G +SN+ P V+ + N + ++CG++H+ LSK +++FG G D
Sbjct: 539 DFGRLGHGDSNSR-NIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGG-----D 590
Query: 241 SPKSVHKTPQLIHGPWIASPVAMTAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSD-- 298
+ K H ++ P + + G+ ++K+ +G S+ +
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQ-------------GMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 299 -------GVLSDDFRVLNP-------ATQILDVNF 319
G S + L P AT+I+DV+
Sbjct: 638 WGCGACLGCGSSEATALRPKLIEELAATRIVDVSI 672
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
G SLAL G+V+ WG LG S++ + PK ++ LA+ +V G SHC
Sbjct: 621 AGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALR-PKLIEELAATRIVDVSIGDSHC 677
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
L AL+ EV+ WG ++ GQ G + + PK+V GL +++ Q
Sbjct: 678 L------------ALSHDNEVYAWGNNSMGQCG-QGNSTGPITKPKKVSGLDGIAIQQIS 724
Query: 122 AGYSHCLVLTS 132
AG SH L T+
Sbjct: 725 AGTSHSLAWTA 735
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 99/231 (42%), Gaps = 56/231 (24%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +HSL L GEVF WG + GQ+G S +Q IP+RV G VV + A C
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVMSIACGQMC- 216
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
S+A+ D GEV+ WG + +GQLGL S+ +Q P RV L + V +
Sbjct: 217 ----------SMAVVDTGEVYVWGYNGNGQLGLGSSG--NQPTPCRVAALQGIRVQRVAC 264
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
GY+H LVLT G++Y WG N Y
Sbjct: 265 GYAHTLVLTDE--------------------------------------GQIYAWGANSY 286
Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
GQ+G N SN + P VE + I + AC + H+ +Y +G
Sbjct: 287 GQLGTGNKSNQSYPTPVVVEK--DRIIEIAACHSAHTSAAKSQGGHVYMWG 335
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 115/275 (41%), Gaps = 60/275 (21%)
Query: 8 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHCLVLTS 66
LA D GEVFTWG + + QLG + +P + L++ V++ G H LVLTS
Sbjct: 113 LATTD-GEVFTWGHNAYSQLG--NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169
Query: 67 TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
GEVF WG + GQ+G S +Q IP+RV G VV + A
Sbjct: 170 D------------GEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVMSIA---- 211
Query: 127 CLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG 186
C + S VV GE+Y WG N GQ+G
Sbjct: 212 CGQMCSMAVV---------------------------------DTGEVYVWGYNGNGQLG 238
Query: 187 INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH 246
+ +S T P RV +L + + +ACG H+ VL+ ++YA+G S QL + +
Sbjct: 239 LGSSGNQPT-PCRVAALQGIRVQRVACGYAHTLVLTDE-GQIYAWGANSYGQLGTGNKSN 296
Query: 247 K---TPQLIHGPWIASPVAMTAGEDSLVSHSGGLV 278
+ TP ++ I A + S GG V
Sbjct: 297 QSYPTPVVVEKDRIIEIAACHSAHTSAAKSQGGHV 331
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 101/245 (41%), Gaps = 56/245 (22%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +HSL L GEVF WG + GQ+G S +Q IP+RV G VV A C
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVMNIACGQMC- 216
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
S+A+ D GEV+ WG + +GQLGL S+ +Q P RV L + V +
Sbjct: 217 ----------SMAVVDTGEVYVWGYNGNGQLGLGSSG--NQPTPCRVAALQGIRVQRVAC 264
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
GY+H LVLT G++Y WG N Y
Sbjct: 265 GYAHTLVLTDE--------------------------------------GQIYAWGANSY 286
Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
GQ+G N SN + P VE + I + AC + H+ +Y +G +
Sbjct: 287 GQLGTGNKSNQSYPTPVVVEK--DRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 344
Query: 242 PKSVH 246
P H
Sbjct: 345 PHHTH 349
Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 114/275 (41%), Gaps = 60/275 (21%)
Query: 8 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK-GLASVSVVQACAGYSHCLVLTS 66
LA D GEVFTWG + + QLG + +P + L++ V++ G H LVLTS
Sbjct: 113 LATTD-GEVFTWGHNAYSQLG--NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTS 169
Query: 67 TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
GEVF WG + GQ+G S +Q IP+RV G VV A
Sbjct: 170 D------------GEVFAWGYNNSGQVG--SGSTANQPIPRRVTGCLQNKVVMNIA---- 211
Query: 127 CLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMG 186
C + S VV GE+Y WG N GQ+G
Sbjct: 212 CGQMCSMAVV---------------------------------DTGEVYVWGYNGNGQLG 238
Query: 187 INNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH 246
+ +S T P RV +L + + +ACG H+ VL+ ++YA+G S QL + +
Sbjct: 239 LGSSGNQPT-PCRVAALQGIRVQRVACGYAHTLVLTDE-GQIYAWGANSYGQLGTGNKSN 296
Query: 247 K---TPQLIHGPWIASPVAMTAGEDSLVSHSGGLV 278
+ TP ++ I A + S GG V
Sbjct: 297 QSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHV 331
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS AL GE++TWG +G+LG D +Q PK VK L V+Q G
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3163
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+LAL D G VF+WG G+LG + +IP+ ++ L V Q
Sbjct: 3164 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3212
Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
G L LT SGVV K + G GSD P +G++ + H + +L+
Sbjct: 3213 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3270
Query: 170 ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
G++Y WG+N++GQ G N + T KP V+ L I +ACG++HS
Sbjct: 3271 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
G HS + G+++TWG +G+LG +D + Q PK V+ L VV G
Sbjct: 4098 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVVDIACG---- 4151
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
+G +L L D V++WG +G+LG +D +P ++ L + VV+
Sbjct: 4152 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4203
Query: 122 AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
G + LT SG V K + G GSD QG+Q V T
Sbjct: 4204 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
GE+YTWG+N+ GQ+G +N + +P+ V +L + +ACG+ H+ S S
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4319
Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
+G H+ AL G+VF+WG G+LG S + + P+ ++ L + + G SH
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3111
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
LTS+ GE++TWG +G+LG D +Q PK VK L V+Q
Sbjct: 3112 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3157
Query: 122 AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
G + L LT G+V + G G + N+ + + +
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217
Query: 167 -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
+L G ++TWG +Y ++G + S+ V KPQ VE L I +A GA H ++ S
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3275
Query: 226 SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
++YA+G Q + +V++ P L+ G
Sbjct: 3276 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3305
Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
H LAL GEV++WG G+LG ++P + K +++ S QA H
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 556
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
G +S A+ GE++TWG +G+LG S++ ++IP V GL + V+
Sbjct: 557 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 608
Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
CGS D+ T + N G++++WG+ +YG+
Sbjct: 609 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 636
Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
+G S+ T P+ +E L +L + + CG+ S L+K ++Y++G G +L
Sbjct: 637 LGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 694
Query: 245 VH-KTPQLIHG 254
H + P+L+ G
Sbjct: 695 EHVRYPKLLEG 705
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 34/259 (13%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G+V+ G T+G+LGL + IP+++ L+S VV+ A +S G H+
Sbjct: 3011 GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3059
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
AL G+VF+WG G+LG S + + P+ ++ L + + G SH LTSS
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3117
Query: 134 GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
G + + G G + +Q ++ +V+ H I +L G +++
Sbjct: 3118 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3176
Query: 177 WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
WG+ ++G++G S PQ +E L + I CGA S L+KS ++ +G G
Sbjct: 3177 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3234
Query: 237 VQLDSPKSVH-KTPQLIHG 254
+L VH + PQ++ G
Sbjct: 3235 FRLGHGSDVHVRKPQVVEG 3253
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 29/234 (12%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +S A+ GE++TWG +G+LG S++ ++IP V GL + V+ G
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 611
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+G +LA+ + G+V++WG +G+LG +D PK ++ L + VV+
Sbjct: 612 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVVKVRC 664
Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
G + LT G V K + G G++ +G+Q V D T +L
Sbjct: 665 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
E+++WG+N+ Q + T +P + L I IACG SF S
Sbjct: 725 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS 777
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 67/320 (20%)
Query: 7 SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
+L+ G ++ WG + GQL G+E A K +P + LA++ VQ G +T
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4001
Query: 66 STTGLW------------------------------------------HSLALNDCGEVF 83
+ L+ H LAL+ GEV+
Sbjct: 4002 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061
Query: 84 TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
+WG G+LG ++ P+ ++ L + VV AG +H +T++G + T
Sbjct: 4062 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4119
Query: 143 NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
G SD ++ LV+ H + G+ +++WG+ +YG++G
Sbjct: 4120 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4179
Query: 188 NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
S+ P +++SL L + + CG+ S L+KS + +Y +G G +L H
Sbjct: 4180 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4237
Query: 247 KTPQLIHGPWIASPVAMTAG 266
+ P+ + G +A+ G
Sbjct: 4238 RRPRQVQGLQGKKVIAIATG 4257
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 44/230 (19%)
Query: 15 EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
+VF WG + QLG K +P + L++++VVQ G +T
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3010
Query: 75 ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
G+V+ G T+G+LGL + IP+++ L+S V V +G H LT
Sbjct: 3011 -----GKVYACGEATNGRLGL-GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3064
Query: 133 SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
G V G G D G +++ ++D SH+ +L S G
Sbjct: 3065 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3118
Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
ELYTWG EYG++G + NTT KP+ V+ L+ + +ACG+ + L+
Sbjct: 3119 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 38/260 (14%)
Query: 57 GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
G S L+ GL + + +VF WG + QLG K +P + L++++
Sbjct: 2938 GNSGSLIRKKAAGLESAATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2993
Query: 117 VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
VVQ G +T G V C NG G+ P S V+ V
Sbjct: 2994 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053
Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
T+L G++++WG + G++G + S KP+ +E+L I IACG++HS
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3112
Query: 220 VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
L+ S LY +G+G +L PK V H+ Q+ G A +A+T
Sbjct: 3113 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3169
Query: 267 EDSLVSHSGGLVVKKIYSGG 286
++ LV G K+ GG
Sbjct: 3170 DEGLVFSWGDGDFGKLGRGG 3189
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G SLAL G V+TWG + +LG +D + P+ V+GL +V G HCL
Sbjct: 3213 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3270
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+T D G+V+ WG + HGQ G + P V+GL + +
Sbjct: 3271 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3316
Query: 123 GYSHCLVLTSSGVVT 137
G SH + T+ V T
Sbjct: 3317 GSSHSVAWTTVDVAT 3331
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)
Query: 40 PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
P+ V+GLAS ++V+ + + + H LAL GEV++WG G+LG
Sbjct: 484 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 528
Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
++P + K +++ S QA H CGS
Sbjct: 529 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 560
Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
T ++ + GELYTWG YG++G +S P V L L + +ACG+ +
Sbjct: 561 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 615
Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
L+ + + +++++G G +L S KTP+LI
Sbjct: 616 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 652
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 109/234 (46%), Gaps = 33/234 (14%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS AL GE++TWG +G+LG D +Q PK VK L V+Q G
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVACGSRDA- 3164
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+LAL D G VF+WG G+LG + +IP+ ++ L V Q
Sbjct: 3165 ---------QTLALTDEGLVFSWGDGDFGKLG--RGGSEGCNIPQNIERLNGQGVCQIEC 3213
Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSD-----PS--QGVQSNLVQDSHTTITSLN-- 169
G L LT SGVV K + G GSD P +G++ + H + +L+
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKI--VHVAVGALHCL 3271
Query: 170 ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
G++Y WG+N++GQ G N + T KP V+ L I +ACG++HS
Sbjct: 3272 AVTDSGQVYAWGDNDHGQQG-NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 29/237 (12%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
G HS + G+++TWG +G+LG +D + Q PK V+ L V+ G
Sbjct: 4100 AGGAHSACVTAAGDLYTWGKGRYGRLG--HSDSEDQLKPKLVEALQGHRVIDIACG---- 4153
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
+G +L L D V++WG +G+LG +D +P ++ L + VV+
Sbjct: 4154 ------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD--GCKVPMKIDSLTGLGVVKVE 4205
Query: 122 AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQDSHTT---ITS 167
G + LT SG V K + G GSD QG+Q V T
Sbjct: 4206 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
GE+YTWG+N+ GQ+G +N + +P+ V +L + +ACG+ H+ S S
Sbjct: 4266 CTEDGEVYTWGDNDEGQLGDGTTN-AIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4321
Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 35/270 (12%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
+G H+ AL G+VF+WG G+LG S + + P+ ++ L + + G SH
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHS 3112
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
LTS+ GE++TWG +G+LG D +Q PK VK L V+Q
Sbjct: 3113 AALTSS------------GELYTWGLGEYGRLG--HGDNTTQLKPKMVKVLLGHRVIQVA 3158
Query: 122 AGY--SHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTIT--------- 166
G + L LT G+V + G G + N+ + + +
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218
Query: 167 -SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
+L G ++TWG +Y ++G + S+ V KPQ VE L I +A GA H ++ S
Sbjct: 3219 LALTKSGVVWTWGKGDYFRLG-HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS- 3276
Query: 226 SRLYAFGIGS-AVQLDSPKSVHKTPQLIHG 254
++YA+G Q + +V++ P L+ G
Sbjct: 3277 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3306
Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 53/251 (21%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIP-KRVKGLASVSVVQACAGYSHCLVL 64
H LAL GEV++WG G+LG ++P + K +++ S QA H
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLG------HGDTVPLEEPKVISAFSGKQAGKHVVHI--- 557
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGY 124
G +S A+ GE++TWG +G+LG S++ ++IP V GL + V+
Sbjct: 558 --ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDV---- 609
Query: 125 SHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQ 184
CGS D+ T + N G++++WG+ +YG+
Sbjct: 610 -------------------ACGSG-----------DAQTLAVTEN--GQVWSWGDGDYGK 637
Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKS 244
+G S+ T P+ +E L +L + + CG+ S L+K ++Y++G G +L
Sbjct: 638 LGRGGSDGCKT-PKLIEKLQDLDVIKVRCGSQFSIALTKD-GQVYSWGKGDNQRLGHGTE 695
Query: 245 VH-KTPQLIHG 254
H + P+L+ G
Sbjct: 696 EHVRYPKLLEG 706
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 122/259 (47%), Gaps = 34/259 (13%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G+V++ G T+G+LGL + IP+++ L+S VV+ A +S G H+
Sbjct: 3012 GKVYSCGEATNGRLGL-GMSSGTVPIPRQITALSSY-VVKKVAVHS---------GGRHA 3060
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
AL G+VF+WG G+LG S + + P+ ++ L + + G SH LTSS
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLGHFS--RMNCDKPRLIEALKTKRIRDIACGSSHSAALTSS 3118
Query: 134 GVVTC----THKENGCGSDPSQGVQSNLVQD--SHTTIT-----------SLNSPGELYT 176
G + + G G + +Q ++ +V+ H I +L G +++
Sbjct: 3119 GELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFS 3177
Query: 177 WGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
WG+ ++G++G S PQ +E L + I CGA S L+KS ++ +G G
Sbjct: 3178 WGDGDFGKLGRGGSE-GCNIPQNIERLNGQGVCQIECGAQFSLALTKS-GVVWTWGKGDY 3235
Query: 237 VQLDSPKSVH-KTPQLIHG 254
+L VH + PQ++ G
Sbjct: 3236 FRLGHGSDVHVRKPQVVEG 3254
Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 29/234 (12%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +S A+ GE++TWG +G+LG S++ ++IP V GL + V+ G
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSE--DEAIPMLVAGLKGLKVIDVACG----- 612
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+G +LA+ + G+V++WG +G+LG +D PK ++ L + V++
Sbjct: 613 -----SGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD--GCKTPKLIEKLQDLDVIKVRC 665
Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSDPS-------QGVQSNLVQD---SHTTITSL 168
G + LT G V K + G G++ +G+Q V D T +L
Sbjct: 666 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
E+++WG+N+ Q + T +P + L + I IACG SF S
Sbjct: 726 TEDSEVHSWGSNDQCQH-FDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS 778
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 130/320 (40%), Gaps = 67/320 (20%)
Query: 7 SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
+L+ G ++ WG + GQL G+E A K +P + LA++ VQ G +T
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVK---VPTPCEALATLRPVQLIGGEQTLFAVT 4003
Query: 66 STTGLW------------------------------------------HSLALNDCGEVF 83
+ L+ H LAL+ GEV+
Sbjct: 4004 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4063
Query: 84 TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTHKE 142
+WG G+LG ++ P+ ++ L + VV AG +H +T++G + T
Sbjct: 4064 SWGEAEDGKLG--HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR 4121
Query: 143 NG--CGSDPSQGVQSNLVQ--DSHTTITSLNSPGE-----------LYTWGNNEYGQMGI 187
G SD ++ LV+ H I G+ +++WG+ +YG++G
Sbjct: 4122 YGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGR 4181
Query: 188 NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVH- 246
S+ P +++SL L + + CG+ S L+KS + +Y +G G +L H
Sbjct: 4182 GGSDGCKV-PMKIDSLTGLGVVKVECGSQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHV 4239
Query: 247 KTPQLIHGPWIASPVAMTAG 266
+ P+ + G +A+ G
Sbjct: 4240 RRPRQVQGLQGKKVIAIATG 4259
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 44/230 (19%)
Query: 15 EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
+VF WG + QLG K +P + L++++VVQ G +T
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVE------- 3011
Query: 75 ALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS--VSVVQACAGYSHCLVLTS 132
G+V++ G T+G+LGL + IP+++ L+S V V +G H LT
Sbjct: 3012 -----GKVYSCGEATNGRLGL-GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTV 3065
Query: 133 SGVVTCTHKENGCGSDPSQG---------------VQSNLVQD-----SHTTITSLNSPG 172
G V G G D G +++ ++D SH+ +L S G
Sbjct: 3066 DGKVFSW----GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA--ALTSSG 3119
Query: 173 ELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
ELYTWG EYG++G + NTT KP+ V+ L+ + +ACG+ + L+
Sbjct: 3120 ELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 112/260 (43%), Gaps = 38/260 (14%)
Query: 57 GYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS 116
G + L+ T GL + + +VF WG + QLG K +P + L++++
Sbjct: 2939 GSTGSLIRKKTPGLESTATIRT--KVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALN 2994
Query: 117 VVQACAGYSHCLVLTSSG-VVTCTHKENG-------CGSDP---------SQGVQSNLVQ 159
VVQ G +T G V +C NG G+ P S V+ V
Sbjct: 2995 VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3054
Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
T+L G++++WG + G++G + S KP+ +E+L I IACG++HS
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLG-HFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3113
Query: 220 VLSKSVSRLYAFGIGSAVQLD--------SPKSV-----HKTPQLIHGPWIASPVAMTAG 266
L+ S LY +G+G +L PK V H+ Q+ G A +A+T
Sbjct: 3114 ALTSS-GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALT-- 3170
Query: 267 EDSLVSHSGGLVVKKIYSGG 286
++ LV G K+ GG
Sbjct: 3171 DEGLVFSWGDGDFGKLGRGG 3190
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G SLAL G V+TWG + +LG +D + P+ V+GL +V G HCL
Sbjct: 3214 GAQFSLALTKSGVVWTWGKGDYFRLG-HGSDVHVRK-PQVVEGLRGKKIVHVAVGALHCL 3271
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+T D G+V+ WG + HGQ G + P V+GL + +
Sbjct: 3272 AVT------------DSGQVYAWGDNDHGQQG--NGTTTVNRKPTLVQGLEGQKITRVAC 3317
Query: 123 GYSHCLVLTSSGVVT 137
G SH + T+ V T
Sbjct: 3318 GSSHSVAWTTVDVAT 3332
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 51/217 (23%)
Query: 40 PKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD 99
P+ V+GLAS ++V+ + + + H LAL GEV++WG G+LG
Sbjct: 485 PQLVQGLASRNIVK----------IAAHSDGHHYLALAATGEVYSWGCGDGGRLG----- 529
Query: 100 KKSQSIP-KRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLV 158
++P + K +++ S QA H CGS
Sbjct: 530 -HGDTVPLEEPKVISAFSGKQAGKHVVHI----------------ACGS----------- 561
Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHS 218
T ++ + GELYTWG YG++G +S P V L L + +ACG+ +
Sbjct: 562 ----TYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDA 616
Query: 219 FVLSKSVS-RLYAFGIGSAVQLDSPKSVH-KTPQLIH 253
L+ + + +++++G G +L S KTP+LI
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE 653
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 97/231 (41%), Gaps = 56/231 (24%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +HSL L GEVF WG + GQ+G S +Q IP+RV G VV
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTVNQPIPRRVTGCLQNKVV---------- 207
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+T G +A+ D GEV+ WG + +GQLGL + +Q P RV L + V +
Sbjct: 208 -VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGL--GNSGNQPTPCRVAALQGIRVQRVAC 264
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
GY+H LVLT G ++Y WG N Y
Sbjct: 265 GYAHTLVLTDEG--------------------------------------QVYAWGANSY 286
Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
GQ+G N SN + P VE + I + AC + H+ +Y +G
Sbjct: 287 GQLGTGNKSNQSYPTPVTVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 43/180 (23%)
Query: 76 LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
+ND E+F G + G LGL D +S P+R+ L + AC Y
Sbjct: 63 VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGKKI--ACLSY----------- 105
Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
GS P I + GE++TWG+N Y Q+G +N +
Sbjct: 106 ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNHGLV 141
Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
+L N + +ACG+ HS VL+ S ++A+G ++ Q+ S +V++ P+ + G
Sbjct: 142 PCHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG 200
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 97/231 (41%), Gaps = 56/231 (24%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +HSL L GEVF WG + GQ+G S +Q IP+RV G VV
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG--SGSTVNQPIPRRVTGCLQNKVV---------- 207
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+T G +A+ D GEV+ WG + +GQLGL + +Q P RV L + V +
Sbjct: 208 -VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGL--GNSGNQPTPCRVAALQGIRVQRVAC 264
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
GY+H LVLT G ++Y WG N Y
Sbjct: 265 GYAHTLVLTDEG--------------------------------------QVYAWGANSY 286
Query: 183 GQMGI-NNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
GQ+G N SN + P VE + I + AC + H+ +Y +G
Sbjct: 287 GQLGTGNKSNQSYPTPVTVEK--DRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 43/180 (23%)
Query: 76 LNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGV 135
+ND E+F G + G LGL D +S P+R+ L + AC Y
Sbjct: 63 VND--EIFVLGTNCCGCLGL--GDVQSTIEPRRLDSLNGKKI--ACLSY----------- 105
Query: 136 VTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVT 195
GS P I + GE++TWG+N Y Q+G +N +
Sbjct: 106 ----------GSGPH--------------IVLATTEGEVFTWGHNAYSQLGNGTTNHGLV 141
Query: 196 KPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQLIHG 254
+L N + +ACG+ HS VL+ S ++A+G ++ Q+ S +V++ P+ + G
Sbjct: 142 PCHISTNLSNKQVIEVACGSYHSLVLT-SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTG 200
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 106/234 (45%), Gaps = 33/234 (14%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS A++ GE++TWG +G+LG D +Q PK V LA VVQ G
Sbjct: 3133 GSSHSAAISSQGELYTWGLGEYGRLG--HGDNTTQLKPKLVTALAGRRVVQVACGSRDA- 3189
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+LAL + G VF+WG G+LG + P ++ L+ + VVQ
Sbjct: 3190 ---------QTLALTEDGAVFSWGDGDFGKLG--RGGSEGSDTPHEIERLSGIGVVQIEC 3238
Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGSD-------PSQGVQSNLVQDSHTTITSLN-- 169
G L LT +G V K + G G D P G++ V H + +L+
Sbjct: 3239 GAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRV--IHVAVGALHCL 3296
Query: 170 ---SPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFV 220
G++Y WG+N++GQ G N+ KP V L + + +ACG++HS
Sbjct: 3297 AVTDAGQVYAWGDNDHGQQGSGNTFVN-KKPALVIGLDAVFVNRVACGSSHSIA 3349
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 29/236 (12%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS A+ G V TWG +G+LG D + Q PK V+ L + G
Sbjct: 4196 GSAHSAAITASGHVLTWGKGRYGRLG--HGDSEDQLRPKLVEALLGYRAIDIACG----- 4248
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+G +L + D V++WG +G+LG +D +P +++ LA + VV+
Sbjct: 4249 -----SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD--GCKLPYKIESLAGLGVVKVEC 4301
Query: 123 GYSHCLVLTSSGVVTCTHKEN----GCGS-----DPS-----QGVQSNLVQDSHTTITSL 168
G + LT SG V K + G GS P QG + + +
Sbjct: 4302 GSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVAC 4361
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
+ GE+YTWG+N+ GQ+G + + T + +P+ V +L I + CG+ H+ LS S
Sbjct: 4362 SDSGEVYTWGDNDEGQLG-DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4416
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 120/270 (44%), Gaps = 35/270 (12%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
+G H+LAL G+VF+WG G+LG ++ + P+ V+ L + + G S
Sbjct: 3080 SGGKHALALTLDGKVFSWGEGEDGKLG--HGNRTTLDKPRLVEALRAKKIRDVACGSS-- 3135
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
HS A++ GE++TWG +G+LG D +Q PK V LA VVQ
Sbjct: 3136 ----------HSAAISSQGELYTWGLGEYGRLG--HGDNTTQLKPKLVTALAGRRVVQVA 3183
Query: 122 AGY--SHCLVLTSSGVVTC--------THKENGCGSDPSQ------GVQSNLVQDSHTTI 165
G + L LT G V + GSD G+ ++
Sbjct: 3184 CGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFS 3243
Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
+L GE++TWG +Y ++G + + V KPQ + L + +A GA H ++ +
Sbjct: 3244 LALTRAGEVWTWGKGDYYRLG-HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDA- 3301
Query: 226 SRLYAFGIGSAVQLDSPKS-VHKTPQLIHG 254
++YA+G Q S + V+K P L+ G
Sbjct: 3302 GQVYAWGDNDHGQQGSGNTFVNKKPALVIG 3331
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 114/290 (39%), Gaps = 72/290 (24%)
Query: 7 SLALNDCGEVFTWGGDTHGQL-GLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
+L+ ++ WG + GQL GLE + K+ P + L+ + VQ G +T
Sbjct: 4042 ALSWGGASTIYGWGHNHRGQLGGLEGSRIKT---PTPCEALSLLRPVQLAGGEQSLFAVT 4098
Query: 66 S------------------------------------------TTGLWHSLALNDCGEVF 83
+G H LAL GEV+
Sbjct: 4099 PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVY 4158
Query: 84 TWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN 143
WG G+LG ++ S PK V+ L +SV G +H +T+SG V K
Sbjct: 4159 AWGEGEDGKLG--HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGR 4216
Query: 144 ----GCGSDPSQGVQSNLVQ---------------DSHTTITSLNSPGELYTWGNNEYGQ 184
G G Q ++ LV+ D+ T + + +++WG+ +YG+
Sbjct: 4217 YGRLGHGDSEDQ-LRPKLVEALLGYRAIDIACGSGDAQTLCITDDD--NVWSWGDGDYGK 4273
Query: 185 MGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
+G S+ P ++ESL L + + CG+ S L+KS + +Y +G G
Sbjct: 4274 LGRGGSD-GCKLPYKIESLAGLGVVKVECGSQFSVALTKSGA-VYTWGKG 4321
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 53/209 (25%)
Query: 14 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHS 73
G+V+ G T+G+LGL + +P ++ L VV+ A +S G H+
Sbjct: 3038 GKVYACGEGTNGRLGL--GVTHNVPLPHQLPVLRQY-VVKKVAVHS---------GGKHA 3085
Query: 74 LALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSS 133
LAL G+VF+WG G+LG ++ + P+ V+ L + + G SH
Sbjct: 3086 LALTLDGKVFSWGEGEDGKLG--HGNRTTLDKPRLVEALRAKKIRDVACGSSHS------ 3137
Query: 134 GVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTT 193
+++S GELYTWG EYG++G + NTT
Sbjct: 3138 --------------------------------AAISSQGELYTWGLGEYGRLG-HGDNTT 3164
Query: 194 VTKPQRVESLVNLPIALIACGANHSFVLS 222
KP+ V +L + +ACG+ + L+
Sbjct: 3165 QLKPKLVTALAGRRVVQVACGSRDAQTLA 3193
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 108/238 (45%), Gaps = 31/238 (13%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +S A+ G + TWG T+ +LG ++D + S+P V L+ VV G
Sbjct: 676 GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDR--SLPTLVVALSDHMVVDVALG----- 728
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+G HSLAL G VF WG +G+LG + + Q P V+ L V V A +
Sbjct: 729 -----SGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQ--PILVESLPRVQRVFAGS 781
Query: 123 GYSHCLV----LTSSGVVTCTHKE------NGCGSDPS--QGVQSNLVQDSHTTIT---S 167
+S L L + G TC + GC S P +Q + D ++ +
Sbjct: 782 QFSVALSSEGQLYTWGKATCLGHQLVERSVQGC-SVPRLVSSLQHKRIVDVAVSVAHCLA 840
Query: 168 LNSPGELYTWGNNEYGQM-GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
L+S GE++ WG N+ Q+ + S+ + + + SL P + IAC + S V ++S
Sbjct: 841 LSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSLPTFPASGIACTSAQSLVWTQS 898
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 96/229 (41%), Gaps = 60/229 (26%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H LA++ ++WG +LG D ++++P ++ L Q C +C
Sbjct: 627 HFLAIDSNHNAYSWGTGEDHRLG--HGDTHARAVPTKIAALE-----QHCVQSVYC---- 675
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC--AG 123
G +S A+ G + TWG T+ +LG ++D +S +P V L+ VV +G
Sbjct: 676 ---GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRS--LPTLVVALSDHMVVDVALGSG 730
Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
+H L LTS G+V + WG+ +YG
Sbjct: 731 DAHSLALTSEGLV--------------------------------------FAWGDGDYG 752
Query: 184 QMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
++G N N ++ +P VESL + + G+ S LS S +LY +G
Sbjct: 753 KLGNGNCNGSL-QPILVESLPR--VQRVFAGSQFSVALS-SEGQLYTWG 797
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI--PKRVKGLASVSVVQACAGYS 59
TG H +A +D GEV+TWG + GQLG D +I P+ V L +V+ G +
Sbjct: 4353 TGSLHCVACSDSGEVYTWGDNDEGQLG----DGTVTAIQRPRLVAALQGKHIVKVTCGSA 4408
Query: 60 HCLVLTST 67
H L L+++
Sbjct: 4409 HTLALSTS 4416
>sp|O94275|MUG30_SCHPO Probable E3 ubiquitin-protein ligase mug30 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug30 PE=1 SV=1
Length = 807
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 79/139 (56%), Gaps = 17/139 (12%)
Query: 938 LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIV 997
C YPF+ AK ++L++D R +ME + F L N + YL + V RD ++
Sbjct: 387 FCQYPFLLSMGAKISILQLDARRKMEIKAREAFFSSILSKMN---VEPYLMIRVRRDRLL 443
Query: 998 EDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILD 1057
ED++R++ DF+K LKV +F GEE DAGG++RE+L+LL +++
Sbjct: 444 EDSLRQIND-RNKDFRKALKV------------EFLGEEGIDAGGLKREWLLLLTRKVFS 490
Query: 1058 PKYGMFKEYEETRS-IWFS 1075
P++G+F EE+ + +WF+
Sbjct: 491 PEFGLFVNCEESSNYLWFN 509
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 726 EETRSIWFS-EDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLK 784
E + +WF+ ++ + + G L G+AI+N +++ P A YKK+L P+ DL
Sbjct: 501 ESSNYLWFNYSHRSKEIDYYHMSGILMGIAIHNSINLDVQMPRAFYKKLLQLPLSFNDLD 560
Query: 785 DLSPTLAKSLQDILDYREPDLEDVFGITF 813
D P+L + L+++L + E D+++ +G+ F
Sbjct: 561 DFQPSLYRGLKELLLF-EGDVKNTYGLNF 588
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 93/230 (40%), Gaps = 54/230 (23%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS+AL GEVF WG + GQ+G S +Q P++V + V A
Sbjct: 136 GSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA------ 187
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
G S+A+ D GEV+ WG + +GQLGL + +Q P RV L SV V Q
Sbjct: 188 -----CGQTSSMAVLDNGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHSVCVNQIVC 240
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
GY+H L LT G+ LY WG N Y
Sbjct: 241 GYAHTLALTDEGL--------------------------------------LYAWGANTY 262
Query: 183 GQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
GQ+G N N ++ P + + + AC + H+ +Y +G
Sbjct: 263 GQLGTGNKNNLLS-PAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 95/236 (40%), Gaps = 54/236 (22%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H L + G V+ WG + + QLG + ++ ++ VQ C V+
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQ-------------GIAPVQVCTNLLIKQVVE 132
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
G HS+AL GEVF WG + GQ+G S +Q P++V + V A
Sbjct: 133 VACGSHHSMALAADGEVFAWGYNNCGQVG--SGSTANQPTPRKVTNCLHIKRVVGIA--- 187
Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
CG S V N GE+Y WG N GQ+
Sbjct: 188 -------------------CGQTSSMAVLDN---------------GEVYGWGYNGNGQL 213
Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
G+ N+ +T P RV +L ++ + I CG H+ L+ LYA+G + QL +
Sbjct: 214 GLGNNGNQLT-PVRVAALHSVCVNQIVCGYAHTLALTDE-GLLYAWGANTYGQLGT 267
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 46/194 (23%)
Query: 61 CLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
C+ TS + +L + D EVF +G + LG + D +S +PK+++GL +
Sbjct: 25 CVFGTSAS---EALYVTDNDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEGLCGKKIKSL 79
Query: 121 CAGYS-HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGN 179
G H L+ T GVV Y WG+
Sbjct: 80 SYGSGPHVLLSTEDGVV--------------------------------------YAWGH 101
Query: 180 NEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
N Y Q+G +N + Q +L+ + +ACG++HS L+ ++A+G + Q+
Sbjct: 102 NGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAAD-GEVFAWGYNNCGQV 160
Query: 240 DSPKSVHK-TPQLI 252
S + ++ TP+ +
Sbjct: 161 GSGSTANQPTPRKV 174
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 84.0 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 64/239 (26%), Positives = 113/239 (47%), Gaps = 53/239 (22%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H+L L+ G+VF+WGG HGQLG + + + + P+ ++ L +++ + AG
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELE--PRLLEALQGLTMAEVAAGG---- 219
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD--KKSQSIPKRVKGLASVSVVQA 120
WHS+ +++ G+++ WG + GQL L + + + +++ + GL
Sbjct: 220 --------WHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNE------ 265
Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQ-----------SNLVQDS----HTTI 165
S V E+G + P VQ S+ V+ S HT +
Sbjct: 266 ----------DGSQVKRTGRVEDGAPA-PFIAVQPFPALLDLPLGSDAVKVSCGSRHTAV 314
Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVN--LPIALIACGANHSFVLS 222
+ GELYTWG +YGQ+G + T++ P+RVE V+ L + + CG +++V +
Sbjct: 315 VT--RTGELYTWGWGKYGQLG-HEDTTSLDWPRRVEYFVDKQLQVKAVTCGPWNTYVYA 370
Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 55/251 (21%), Positives = 98/251 (39%), Gaps = 93/251 (37%)
Query: 69 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 128
G H+L L+ G+VF+WGG HGQLG + + + + P+ ++ L +++ + AG H +
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELE--PRLLEALQGLTMAEVAAGGWHSV 223
Query: 129 VLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM--- 185
++ +G ++Y WG NE GQ+
Sbjct: 224 CVSETG--------------------------------------DIYIWGWNESGQLALP 245
Query: 186 ----------------GINNSNTTVTKPQRVE--------------SLVNLPIA----LI 211
G+N + V + RVE +L++LP+ +
Sbjct: 246 TRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKV 305
Query: 212 ACGANHSFVLSKSVSRLYAFGIGSAVQ--------LDSPKSVH-------KTPQLIHGPW 256
+CG+ H+ V++++ LY +G G Q LD P+ V + + GPW
Sbjct: 306 SCGSRHTAVVTRT-GELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVKAVTCGPW 364
Query: 257 IASPVAMTAGE 267
A+ G+
Sbjct: 365 NTYVYAVEKGK 375
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 123/262 (46%), Gaps = 33/262 (12%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H LA+ GEV +WG + +GQLGL D + +P++++ + + AG H +T
Sbjct: 131 HCLAVTMEGEVQSWGRNQNGQLGL--GDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVT 188
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
G+++ WG +G LGL D+ + +P+RV + G+
Sbjct: 189 ED------------GDLYGWGWGRYGNLGL--GDRTDRLVPERVTSTGGEKMSMVACGWR 234
Query: 126 HCLVLTSSGVV----TCTHKENGCGSDPSQGVQSNLVQDSHTTIT----------SLNSP 171
H + ++ SG + + + G G + L S++ I+ +L S
Sbjct: 235 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD 294
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAF 231
G+LY WG N++GQ+G+ N N P +V + + ++CG H+ +++ + ++A+
Sbjct: 295 GKLYGWGWNKFGQVGVGN-NLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTER-NNVFAW 352
Query: 232 GIGSAVQLDSPKSVHKT-PQLI 252
G G+ QL +SV + P++I
Sbjct: 353 GRGTNGQLGIGESVDRNFPKII 374
Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 107/252 (42%), Gaps = 31/252 (12%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
G HS+AL V +WG GQLG D + + P ++ L +V G H
Sbjct: 22 AGASHSVALLSGDIVCSWGRGEDGQLG--HGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
V S +G+ EV++WG G+LG ++ +P +K L + + Q
Sbjct: 80 -VAYSQSGM----------EVYSWGWGDFGRLGHGNSSDLFTPLP--IKALHGIRIKQIA 126
Query: 122 AGYSHCLVLTSSGVVTCTHKEN----GCGSDPS----------QGVQSNLVQDSHTTITS 167
G SHCL +T G V + G G +G++ +V +
Sbjct: 127 CGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAA 186
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
+ G+LY WG YG +G+ + + P+RV S ++++ACG H+ +S S +
Sbjct: 187 VTEDGDLYGWGWGRYGNLGLGDRTDRLV-PERVTSTGGEKMSMVACGWRHTISVSYSGA- 244
Query: 228 LYAFGIGSAVQL 239
LY +G QL
Sbjct: 245 LYTYGWSKYGQL 256
>sp|Q05086|UBE3A_HUMAN Ubiquitin-protein ligase E3A OS=Homo sapiens GN=UBE3A PE=1 SV=4
Length = 875
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 75/151 (49%), Gaps = 18/151 (11%)
Query: 942 PFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTI 1001
PFI +A K L D RI+M T Y +Q LN YL ++V RD+I++D +
Sbjct: 481 PFILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQG---QQLNPYLRLKVRRDHIIDDAL 537
Query: 1002 REL---AQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDP 1058
L A D KK L V+F GE+ D GGV +EF L+++EI +P
Sbjct: 538 VRLEMIAMENPADLKKQL------------YVEFEGEQGVDEGGVSKEFFQLVVEEIFNP 585
Query: 1059 KYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
GMF E T+ WF+ +FE + + LIG
Sbjct: 586 DIGMFTYDESTKLFWFNPSSFETEGQFTLIG 616
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Query: 721 GITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPIL 779
G+ Y+E T+ WF+ +FE + LIG + GLAIYN I+++ FP+ +Y+K++ +
Sbjct: 588 GMFTYDESTKLFWFNPSSFETEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGT 647
Query: 780 LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
+DL D P L +SL+D+L+Y E ++ED ITF+
Sbjct: 648 FRDLGDSHPVLYQSLKDLLEY-EGNVEDDMMITFQ 681
>sp|O08759|UBE3A_MOUSE Ubiquitin-protein ligase E3A OS=Mus musculus GN=Ube3a PE=2 SV=1
Length = 885
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 75/151 (49%), Gaps = 18/151 (11%)
Query: 942 PFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTI 1001
PFI +A K L D RI+M T Y +Q LN YL ++V RD+I++D +
Sbjct: 492 PFILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQG---QQLNPYLTLKVRRDHIIDDAL 548
Query: 1002 REL---AQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDP 1058
L A D KK L V+F GE+ D GGV +EF L+++EI +P
Sbjct: 549 VRLEMIAMENPADLKKQL------------YVEFEGEQGVDEGGVSKEFFQLVVEEIFNP 596
Query: 1059 KYGMFKEYEETRSIWFSEDTFEDQNMYFLIG 1089
GMF E T+ WF+ +FE + + LIG
Sbjct: 597 DIGMFTYDEATKLFWFNPSSFETEGQFTLIG 627
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 721 GITEYEE-TRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPIL 779
G+ Y+E T+ WF+ +FE + LIG L GLAIYN I+++ FP+ +Y+K++ +
Sbjct: 599 GMFTYDEATKLFWFNPSSFETEGQFTLIGIL-GLAIYNNCILDVHFPMVVYRKLMGKKGT 657
Query: 780 LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
+DL D P L +SL+D+L+Y E +ED ITF+
Sbjct: 658 FRDLGDSHPVLYQSLKDLLEY-EGSVEDDMMITFQ 691
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 63/239 (26%), Positives = 112/239 (46%), Gaps = 53/239 (22%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H+L L+ G+VF+WGG HGQLG + + + + P+ ++ L + + + AG
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELE--PRLLEALQGLVMAEVAAGG---- 219
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESAD--KKSQSIPKRVKGLASVSVVQA 120
WHS+ +++ G+++ WG + GQL L + + + +++ + L
Sbjct: 220 --------WHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNE------ 265
Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQ-----------SNLVQDS----HTTI 165
S V E+G + P VQ S+ V+ S HT +
Sbjct: 266 ----------DGSQVKRTGGAEDGAPA-PFIAVQPFPALLDLPMGSDAVKASCGSRHTAV 314
Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVN--LPIALIACGANHSFVLS 222
+ GELYTWG +YGQ+G + T++ +P+RVE V+ L + + CG +++V +
Sbjct: 315 VT--RTGELYTWGWGKYGQLG-HEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYVYA 370
Score = 41.2 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 168 LNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
L++ G++++WG +GQ+G + + +P+ +E+L L +A +A G HS +S++
Sbjct: 173 LDAAGQVFSWGGGRHGQLG-HGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSET-GD 230
Query: 228 LYAFGIGSAVQLDSP 242
+Y +G + QL P
Sbjct: 231 IYIWGWNESGQLALP 245
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 96/234 (41%), Gaps = 62/234 (26%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS+AL GE+F WG + GQ+G S +Q P++V ++CL
Sbjct: 136 GSHHSMALAADGELFAWGYNNCGQVG--SGSTANQPTPRKV---------------TNCL 178
Query: 63 ----VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVV 118
V+ G S+A+ D GEV+ WG + +GQLGL + +Q P RV L + V
Sbjct: 179 HTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGL--GNNGNQLTPVRVAALHGMCVN 236
Query: 119 QACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWG 178
Q GY+H L LT G+ LY WG
Sbjct: 237 QIVCGYAHTLALTDEGL--------------------------------------LYAWG 258
Query: 179 NNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFG 232
N YGQ+G + N ++ P ++ I + AC + H+ +Y +G
Sbjct: 259 ANTYGQLGTGSKNNLLS-PTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 43/182 (23%)
Query: 73 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS-HCLVLT 131
++ + D EVF +G + LG + D +S +PK+++ L + G H L+ T
Sbjct: 34 AIYVTDNDEVFVFGLNYSNCLG--TGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTT 91
Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSN 191
GVV Y WG+N Y Q+G +N
Sbjct: 92 EDGVV--------------------------------------YAWGHNGYSQLGNGTTN 113
Query: 192 TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHK-TPQ 250
+ Q +L+ + +ACG++HS L+ L+A+G + Q+ S + ++ TP+
Sbjct: 114 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAAD-GELFAWGYNNCGQVGSGSTANQPTPR 172
Query: 251 LI 252
+
Sbjct: 173 KV 174
>sp|Q5RD78|HECD2_PONAB Probable E3 ubiquitin-protein ligase HECTD2 OS=Pongo abelii GN=HECTD2
PE=2 SV=1
Length = 776
Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 16/188 (8%)
Query: 902 VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQ 961
+ YT FY L + D+ +Y W + S R C YPF+ AK +++ D Q
Sbjct: 335 IPYTDFYNSTLDHI-DLMEEYHTWQNF--GNSHRFSFCQYPFVISVAAKKIIIQRDSEQQ 391
Query: 962 MEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDT 1021
M + Q+ + P +L ++V R ++V D++ EL + D KK LKV
Sbjct: 392 MINIARQSLVDKVSRRQRPDMNMLFLNMKVRRTHLVSDSLDELTRKRA-DLKKKLKVT-- 448
Query: 1022 SPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFED 1081
F GE D GG+ +E+ +LL+++I P YGMF ++++ WFS ++
Sbjct: 449 ----------FVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSHCHWFSSFKCDN 498
Query: 1082 QNMYFLIG 1089
+ + L+G
Sbjct: 499 YSEFRLVG 506
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 16/110 (14%)
Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ T ++++ WFS ++ + L+G L GLA+YN +++ FP YKK+L PI
Sbjct: 477 YGMFTYHKDSHCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPI 536
Query: 779 L--------------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
+ + DL + P LA L ++L + E ++E+ F TF+
Sbjct: 537 IPSDQNIPVGICSVTVDDLCQIMPELAHGLSELLSH-EGNVEEDFYSTFQ 585
>sp|Q5U5R9|HECD2_HUMAN Probable E3 ubiquitin-protein ligase HECTD2 OS=Homo sapiens GN=HECTD2
PE=2 SV=2
Length = 776
Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 16/188 (8%)
Query: 902 VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQ 961
+ YT FY L + D+ +Y W + S R C YPF+ AK +++ D Q
Sbjct: 335 IPYTDFYNSTLDHI-DLMEEYHTWQNF--GNSHRFSFCQYPFVISVAAKKIIIQRDSEQQ 391
Query: 962 MEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDT 1021
M + Q+ + P +L ++V R ++V D++ EL + D KK LKV
Sbjct: 392 MINIARQSLVDKVSRRQRPDMNILFLNMKVRRTHLVSDSLDELTRKRA-DLKKKLKVT-- 448
Query: 1022 SPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFED 1081
F GE D GG+ +E+ +LL+++I P YGMF ++++ WFS ++
Sbjct: 449 ----------FVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSHCHWFSSFKCDN 498
Query: 1082 QNMYFLIG 1089
+ + L+G
Sbjct: 499 YSEFRLVG 506
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 16/110 (14%)
Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ T ++++ WFS ++ + L+G L GLA+YN +++ FP YKK+L PI
Sbjct: 477 YGMFTYHKDSHCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPI 536
Query: 779 L--------------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
+ + DL + P LA L ++L + E ++E+ F TF+
Sbjct: 537 IPSDQNIPVGICNVTVDDLCQIMPELAHGLSELLSH-EGNVEEDFYSTFQ 585
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 120/255 (47%), Gaps = 40/255 (15%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H+L + G+V+ GG+ GQLGL D + +S + S ++ + S+
Sbjct: 95 GRNHTLVSTEGGKVYAAGGNNEGQLGL--GDTEERSTFHLISFFTSQRKIKQLSAGSNT- 151
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
S AL + GE+F WG ++ GQ+GLE+ + +P++V +S + +C
Sbjct: 152 ----------SAALTEDGELFMWGDNSEGQIGLENV--TNVCVPQQVTVGKPISWI-SC- 197
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGS--------------DPSQGVQSNLVQ----DSHTT 164
GY H +T+ G + T E CG P G+ +VQ HT
Sbjct: 198 GYYHSAFVTTEGQL-YTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACGGGHTV 256
Query: 165 ITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKS 224
+ + + +YT+G ++GQ+G+ + P+ +E + + I+ IACG NH+ +++
Sbjct: 257 VLTEKA---VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALIT-D 312
Query: 225 VSRLYAFGIGSAVQL 239
+ +Y FG G +L
Sbjct: 313 MGLMYTFGDGRHGKL 327
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 160 DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSF 219
D HT + + N+ +LY +G+N +GQ+G+ S +TV+KP V++L + ACG NH+
Sbjct: 44 DEHTAVVTGNN--KLYMFGSNNWGQLGLG-SKSTVSKPTCVKALKPEKVKFAACGRNHTL 100
Query: 220 VLSKSVSRLYAFGIGSAVQL 239
V S ++YA G + QL
Sbjct: 101 V-STEGGKVYAAGGNNEGQL 119
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 77.8 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 55/239 (23%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H L L G+VF+WG HGQLG + + + + P+ ++ L + + + AG
Sbjct: 169 GAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELE--PRLLEALQGLRMAKVAAGG---- 222
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQL------GLESADKKSQSIPKRVKGLASVS 116
WHS+ L++ G+++ WG + GQL G E+ ++ ++ GL
Sbjct: 223 --------WHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEEL 274
Query: 117 VVQACAGYSHC-----------LVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTI 165
V +H L L S V+ CGS HT +
Sbjct: 275 AVADAGAPAHFIAIQPFPALLDLPLGSDAVMA------SCGS-------------RHTAV 315
Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLV--NLPIALIACGANHSFVLS 222
+ GELYTWG +YGQ+G +S T++ +P VE V L + + CG +++V +
Sbjct: 316 VT--RTGELYTWGWGKYGQLGHKDS-TSLDRPCCVEYFVERQLEVRAVTCGPWNTYVYA 371
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 95/208 (45%), Gaps = 46/208 (22%)
Query: 72 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
HSL + G++++WG + GQLG D K PK ++GL +V A G +H L LT
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLG--HGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALT 191
Query: 132 SSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSP-----------------GEL 174
+G V T EN G QG Q++ V S TI P G L
Sbjct: 192 ENGTVY-TFGENKLGQ-LGQGNQTDAVL-SPATIQYNGQPIVKVACGAEFSMIVDCKGNL 248
Query: 175 YTWGNNEYGQMGINNSNTTVTKPQRVE---SLVNLPIAL--------------------I 211
Y++G EYGQ+G N+ + + QR+E L+ +A+ +
Sbjct: 249 YSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDV 308
Query: 212 ACGANHSFVLSKSVSRLYAFGIGSAVQL 239
ACGANH+ VL S R++++G G +L
Sbjct: 309 ACGANHTLVLD-SQKRVFSWGFGGYGRL 335
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 110/275 (40%), Gaps = 44/275 (16%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HSL + G++++WG + GQLG D K PK ++GL +V A G +H L LT
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLG--HGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALT 191
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
G ++ N G++ G T L + Q I K G A S++ C G
Sbjct: 192 EN-GTVYTFGENKLGQLGQ-GNQTDAVLSPATIQYNGQPIVKVACG-AEFSMIVDCKGNL 248
Query: 126 HCLVLTSSG----------VVTCTHKENGCGSDPSQ--------------GVQSNLVQD- 160
+ G + E C P + V + + +D
Sbjct: 249 YSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDV 308
Query: 161 ----SHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLP---IALIAC 213
+HT + L+S +++WG YG++G + R+ L + P I C
Sbjct: 309 ACGANHTLV--LDSQKRVFSWGFGGYGRLGHAEQKDEMVP--RLVKLFDFPGRGATQIYC 364
Query: 214 GANHSFVLSKSVSRLYAFGIGSAVQLDS--PKSVH 246
G SF LS+ + L+ +G+ + + + PK+V
Sbjct: 365 GYQCSFALSE-MGGLFFWGVTNTSRESTMYPKAVQ 398
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 65/165 (39%), Gaps = 38/165 (23%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK--GLASVSVVQACAGYSH 60
G H+L L+ VF+WG +G+LG A++K + +P+ VK Q GY
Sbjct: 311 GANHTLVLDSQKRVFSWGFGGYGRLG--HAEQKDEMVPRLVKLFDFPGRGATQIYCGYQC 368
Query: 61 CLVLTSTTGLW-------------HSLALND----------CGE----------VFTWG- 86
L+ GL+ + A+ D CG+ +WG
Sbjct: 369 SFALSEMGGLFFWGVTNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAADDSTISWGP 428
Query: 87 GDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
T G+LG KS + + VK L V Q GYSH LV+
Sbjct: 429 SPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVIA 473
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 38/254 (14%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H+L D G V+ GG+ GQLGL D + + + V + ++ Q AG +
Sbjct: 95 GRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRD-TFHQIVFFTPADTIKQLSAGANT-- 151
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
S AL + G++F WG ++ GQ+GLE DK + IP V +S + +C
Sbjct: 152 ----------SAALTEDGKLFMWGDNSEGQIGLE--DKSNVCIPHEVTVGKPISWI-SC- 197
Query: 123 GYSHCLVLTSSG-VVTCTHKENGCGSDPSQ------------GVQSNLVQ----DSHTTI 165
GY H +T G + T ENG P++ G+ ++Q HT +
Sbjct: 198 GYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVV 257
Query: 166 TSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSV 225
+ +Y +G ++GQ+G+ ++P+ +E + + I I+CG NH+ ++++ +
Sbjct: 258 LTEKV---VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE-L 313
Query: 226 SRLYAFGIGSAVQL 239
LY FG G +L
Sbjct: 314 GLLYTFGDGRHGKL 327
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 115/254 (45%), Gaps = 39/254 (15%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H+ + +++ +G + GQLGL S K + P +K L V A G +H L
Sbjct: 43 GDEHTAIVTGNNKLYMFGSNNWGQLGLGS--KAAIIKPTCIKALKPEKVKLAACGRNHTL 100
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
V T T G V+ GG+ GQLGL D + + + V + ++ Q A
Sbjct: 101 VSTDTGG------------VYAAGGNNEGQLGLGDTDDRD-TFHQIVFFTPADTIKQLSA 147
Query: 123 GYSHCLVLT-----------SSGVVTCTHKENGC-GSDPSQGVQSNLVQDS--HTTITSL 168
G + LT S G + K N C + + G + + H+ ++
Sbjct: 148 GANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTM 207
Query: 169 NSPGELYTWGNNEYGQMGINNSNTTVTK-PQRVESLVNLP--IALIACGANHSFVLSKSV 225
+ GELYT+G E G++G+ N + PQRV + +P + +ACG H+ VL++ V
Sbjct: 208 D--GELYTFGEPENGKLGLPNELLMNHRSPQRV---LGIPERVIQVACGGGHTVVLTEKV 262
Query: 226 SRLYAFGIGSAVQL 239
+YAFG+G QL
Sbjct: 263 --VYAFGLGQFGQL 274
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 103/240 (42%), Gaps = 42/240 (17%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G S AL + G++F WG ++ GQ+GLE DK + IP V +S + +C
Sbjct: 148 GANTSAALTEDGKLFMWGDNSEGQIGLE--DKSNVCIPHEVTVGKPISWI-SC------- 197
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
G +HS + GE++T+G +G+LGL + + P+RV G+ V+Q
Sbjct: 198 ------GYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVAC 250
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITS--------------- 167
G H +VLT V G G G+ + L + S I
Sbjct: 251 GGGHTVVLTEKVVYAF-----GLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGEN 305
Query: 168 ----LNSPGELYTWGNNEYGQMGINNSN-TTVTKPQRVESLVNLPIALIACGANHSFVLS 222
+ G LYT+G+ +G++G+ N T P + + + LIACG H V +
Sbjct: 306 HTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFA 365
Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 64/170 (37%), Gaps = 41/170 (24%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +HS + GE++T+G +G+LGL + + P+RV G+ V+Q G H +
Sbjct: 198 GYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTV 256
Query: 63 VLTS----------------------------------------TTGLWHSLALNDCGEV 82
VLT + G H+ + + G +
Sbjct: 257 VLTEKVVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLL 316
Query: 83 FTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 132
+T+G HG+LGL + +Q P +V G H LV +
Sbjct: 317 YTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFAT 366
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 47/222 (21%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS +L D GEV+ WG + HGQL E+A +P++++ +HC
Sbjct: 223 HSASLTDAGEVYVWGSNKHGQLANEAA---FLPVPQKIE--------------AHCFQNE 265
Query: 66 STTGLW----HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
T +W H +A + G++FTWG +GQLG + + + K+ L +
Sbjct: 266 KVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSM 325
Query: 122 AGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNE 181
HC LT + V+C G + NL G Y+WG NE
Sbjct: 326 PSSPHC--LTGATEVSC-------------GSEHNLAIIG----------GVCYSWGWNE 360
Query: 182 YGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSK 223
+G G + + V P+ V++L++ L+ CGA HS L +
Sbjct: 361 HGMCG-DGTEANVWAPKPVQALLSSSGLLVGCGAGHSLALCQ 401
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 111/261 (42%), Gaps = 50/261 (19%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HS + D G++F G + GQLGL + P K L + Q G+ ++LT
Sbjct: 60 HSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTP--CKSLFGCPIQQVACGWDFTIMLT 117
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
G+V + G ++ GQLG+ ++ +P+ ++ L VV AG
Sbjct: 118 EN------------GQVLSCGSNSFGQLGVPHGPRRC-VVPQAIE-LHKEKVVCIAAGLR 163
Query: 126 HCLVLTSSGVV--------TCTHKENGC----------GSDPSQ--GVQSN-----LVQD 160
H + T+SG+V +C + C +PS+ G++++ L
Sbjct: 164 HAVAATASGIVFQWGTGLASCGRRL--CPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGS 221
Query: 161 SHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVES--LVNLPIALIACGANHS 218
H+ SL GE+Y WG+N++GQ+ N + PQ++E+ N + I G H
Sbjct: 222 DHS--ASLTDAGEVYVWGSNKHGQLA--NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTH- 276
Query: 219 FVLSKSVSRLYAFGIGSAVQL 239
V +++ +G QL
Sbjct: 277 LVAQTETGKMFTWGRADYGQL 297
Score = 34.7 bits (78), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 81/216 (37%), Gaps = 57/216 (26%)
Query: 22 DTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGE 81
+++GQLGL K+ +P+++ V+ G G HS + D G+
Sbjct: 23 NSYGQLGL--GHKEDVLLPQQLNDFCKPRSVRRITG-----------GGGHSAVVTDGGD 69
Query: 82 VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSG-VVTCTH 140
+F G + GQLGL + P K L + Q G+ ++LT +G V++C
Sbjct: 70 LFVCGLNKDGQLGLGHTEDIPYFTP--CKSLFGCPIQQVACGWDFTIMLTENGQVLSC-- 125
Query: 141 KENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRV 200
G+N +GQ+G+ + PQ +
Sbjct: 126 -------------------------------------GSNSFGQLGVPHGPRRCVVPQAI 148
Query: 201 ESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
E L + IA G H+ + S ++ +G G A
Sbjct: 149 E-LHKEKVVCIAAGLRHAVAATAS-GIVFQWGTGLA 182
>sp|Q757T0|HUL4_ASHGO Probable E3 ubiquitin-protein ligase HUL4 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=HUL4 PE=3 SV=1
Length = 839
Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 52/212 (24%)
Query: 938 LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFN-PHTLNQYLEVEVSRDNI 996
+C PF+F K ++LE + R ME++ Q FL+ + ++ YL++ V R+ +
Sbjct: 431 ICQCPFLFSLGMKISILEYETRRLMEYSAEQA----FLKALDRKQVVDVYLKIRVRREFV 486
Query: 997 VEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEIL 1056
D++R + Q D KK L++ +F E DAGG+R+E+ +LL +++
Sbjct: 487 TTDSLRSI-QNQQKDLKKSLRI------------EFVNEPGIDAGGLRKEWFLLLTRDLF 533
Query: 1057 DPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEYEETRSIWFS 1116
+P G+F E+R WFS E L G+
Sbjct: 534 NPNNGLFVYVPESRLCWFS--IMESIEHELLQGEG------------------------- 566
Query: 1117 EDTFEDQNMYFLIGTLCGLAIYNYTV---RFP 1145
+Y+L G + GLAIYN T+ +FP
Sbjct: 567 ----SSSELYYLFGVVLGLAIYNSTILDLKFP 594
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 14/111 (12%)
Query: 713 PKNGINHYGITEYEETRSIWFS-EDTFEDQ---------NMCFLIGTLCGLAIYNYTIIN 762
P NG+ Y E+R WFS ++ E + + +L G + GLAIYN TI++
Sbjct: 535 PNNGLFVY----VPESRLCWFSIMESIEHELLQGEGSSSELYYLFGVVLGLAIYNSTILD 590
Query: 763 MPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITF 813
+ FP A YKKI E + + D +L P ++ +L+Y D ED+F +TF
Sbjct: 591 LKFPRAFYKKICGEVLSVNDFLELYPETGTNMLKMLEYDGEDFEDIFALTF 641
>sp|Q8CDU6|HECD2_MOUSE Probable E3 ubiquitin-protein ligase HECTD2 OS=Mus musculus GN=Hectd2
PE=2 SV=2
Length = 774
Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 16/188 (8%)
Query: 902 VAYTAFYMPDLATVCDIRIDYFRWISGRPNGSTRDFLCNYPFIFDAKAKTTLLEMDQRIQ 961
V YT FY L + D+ +Y W S S R C YPF+ AK +++ D Q
Sbjct: 333 VPYTDFYNSTLDHI-DLMEEYHTWQSF--GNSHRFSFCQYPFVISIAAKKIIIQRDSEQQ 389
Query: 962 MEHAMNQTNFYLFLQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDT 1021
M Q+ + P +L ++V R ++V D++ EL + D KK LKV
Sbjct: 390 MISIARQSLVDKVSRRQRPDMNMLFLNMKVRRTHLVSDSLDELTRKRA-DLKKKLKVT-- 446
Query: 1022 SPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEILDPKYGMFKEYEETRSIWFSEDTFED 1081
F GE D GG+ +E+ +LL+++I P YGMF ++++ WFS ++
Sbjct: 447 ----------FVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSHCHWFSSFKCDN 496
Query: 1082 QNMYFLIG 1089
+ + L+G
Sbjct: 497 YSEFRLVG 504
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 16/110 (14%)
Query: 720 YGI-TEYEETRSIWFSEDTFEDQNMCFLIGTLCGLAIYNYTIINMPFPLALYKKILDEPI 778
YG+ T ++++ WFS ++ + L+G L GLA+YN +++ FP YKK+L P+
Sbjct: 475 YGMFTYHKDSHCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPV 534
Query: 779 L--------------LQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFR 814
+ + DL + P LA L+++L Y E ++E+ F TF+
Sbjct: 535 VPSDQSTPVGICSVTIDDLCQVMPELAHGLKELLSY-EGNVEEDFYSTFQ 583
>sp|P40985|HUL4_YEAST Probable E3 ubiquitin-protein ligase HUL4 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=HUL4 PE=1
SV=2
Length = 892
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 13/114 (11%)
Query: 713 PKNGINHYGITEYEETRSIWFSED--TFEDQN-------MCFLIGTLCGLAIYNYTIINM 763
P NG+ Y +E+ WF+ D F+ + +L G + GLAI+N TI+++
Sbjct: 579 PMNGLFIY----IKESSRSWFAIDPPNFDKSKGKNSQLELYYLFGVVMGLAIFNSTILDL 634
Query: 764 PFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILDYREPDLEDVFGITFRNWY 817
FP ALYKK+ EP+ +D +L P +++L +L+Y E + EDVF +TF Y
Sbjct: 635 QFPKALYKKLCSEPLSFEDYSELFPETSRNLIKMLNYTEDNFEDVFSLTFETTY 688
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 53/213 (24%)
Query: 938 LCNYPFIFDAKAKTTLLEMDQRIQMEHAMNQTNFYLFLQTFNP-HTLNQYLEVEVSRDNI 996
C YPFI K +++E + R MEH Q FL + + +++ Y +++V RD I
Sbjct: 475 FCKYPFILSLGIKISIMEYEIRRIMEHEAEQA----FLISLDKGKSVDVYFKIKVRRDVI 530
Query: 997 VEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRREFLMLLLKEIL 1056
D++R + ++ D K L++ +F E DAGG+R+E+ LL K +
Sbjct: 531 SHDSLRCIKEHQ-GDLLKSLRI------------EFVNEPGIDAGGLRKEWFFLLTKSLF 577
Query: 1057 DPKYGMFKEYEETRSIWFSEDTFEDQNMYFLIGKEYVPCTYISKYSMFKEYEETRSIWFS 1116
+P G+F +E+ WF+ D P + + E
Sbjct: 578 NPMNGLFIYIKESSRSWFAID----------------PPNFDKSKGKNSQLE-------- 613
Query: 1117 EDTFEDQNMYFLIGTLCGLAIYNYTV---RFPA 1146
+Y+L G + GLAI+N T+ +FP
Sbjct: 614 --------LYYLFGVVMGLAIFNSTILDLQFPK 638
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 113/257 (43%), Gaps = 78/257 (30%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HSL + G++++WG + GQLG D K P+ ++GL SH ++++
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLG--HGDTKRVEAPRLIEGL------------SHEVIVS 206
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+ G H+LAL + G VF +G + GQLGL ++ ++P S
Sbjct: 207 AACGRNHTLALTETGSVFAFGENKMGQLGL---GNQTDAVP------------------S 245
Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
++ + +T + CG++ S ++ D G LY++G EYGQ+
Sbjct: 246 PAQIMYNGQPIT----KMACGAEFS------MIMDCK---------GNLYSFGCPEYGQL 286
Query: 186 GINNSNTTVTKPQRVE-----------------------SLVNLPIALIACGANHSFVLS 222
G N+ + + QR+E + N+ + +ACGANH+ VL
Sbjct: 287 GHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLD 346
Query: 223 KSVSRLYAFGIGSAVQL 239
S R++++G G +L
Sbjct: 347 -SQKRVFSWGFGGYGRL 362
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 65/165 (39%), Gaps = 38/165 (23%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK--GLASVSVVQACAGYSH 60
G H+L L+ VF+WG +G+LG A++K + +P+ VK Q AGY+
Sbjct: 338 GANHTLVLDSQKRVFSWGFGGYGRLG--HAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 395
Query: 61 CLVLTSTTGLWHSLALND-----------------------CGE----------VFTWG- 86
++ GL+ A N CG+ +WG
Sbjct: 396 SFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGP 455
Query: 87 GDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
T G+LG KS + + VK L + Q GYSH LV+
Sbjct: 456 SPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIA 500
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 108/243 (44%), Gaps = 56/243 (23%)
Query: 15 EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS-VSVVQACAGYSHCLVLTSTTGLWHS 73
EV+ WGG +S P+++ + S S Q CAG +H V+T
Sbjct: 348 EVYVWGG--------------GKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEK----- 388
Query: 74 LALNDCGEVFTW-----GGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 128
E++TW G HGQLG DK S PK V+ L ++ Q G +
Sbjct: 389 -------ELYTWVNMQGGTKLHGQLG--HGDKASYRQPKHVEKLQGKAIHQVSCGDDFTV 439
Query: 129 VLTSSGVVTCTHKEN-GC-GSDPSQGVQ-----------SNLVQ-----DSHTTITSLNS 170
+T G + + GC G D G + SN V+ D+H + + N
Sbjct: 440 CVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK 499
Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
E+Y+WG EYG++G+++ T PQRV+ L I + CG + +F+L++S ++ A
Sbjct: 500 --EVYSWGCGEYGRLGLDSEEDYYT-PQRVDVPKALIIVAVQCGCDGTFLLTQS-GKVLA 555
Query: 231 FGI 233
G+
Sbjct: 556 CGL 558
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 117/253 (46%), Gaps = 36/253 (14%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H+L + G V+ GG+ GQLGL D + ++ + S ++ + S+
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGL--GDTEERNTFHVISFFTSEHKIKQLSAGSNT- 151
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
S AL + G +F WG ++ GQ+GL++ + +P++V VS + +C
Sbjct: 152 ----------SAALTEDGRLFMWGDNSEGQIGLKNV--SNVCVPQQVTIGKPVSWI-SCG 198
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQ------------GVQSNLVQ----DSHTTIT 166
Y V T + ENG P+Q + ++Q HT +
Sbjct: 199 YYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVL 258
Query: 167 SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVS 226
+ N+ +YT+G ++GQ+G+ ++P+ +E++ + I+ I+CG NH+ +++ +
Sbjct: 259 TENA---VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALIT-DIG 314
Query: 227 RLYAFGIGSAVQL 239
+Y FG G +L
Sbjct: 315 LMYTFGDGRHGKL 327
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 107/254 (42%), Gaps = 62/254 (24%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS + +++ +G + GQLGL S K + S P VK L V A G +H L
Sbjct: 43 GDEHSAVVTGNNKLYMFGSNNWGQLGLGS--KSAISKPTCVKALKPEKVKLAACGRNHTL 100
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
V ST G G V+ GG+ GQLGL ++++ +S +
Sbjct: 101 V--STEG----------GNVYATGGNNEGQLGLGDTEERNT--------FHVISFFTS-- 138
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
H + S+G T +L G L+ WG+N
Sbjct: 139 --EHKIKQLSAG---------------------------SNTSAALTEDGRLFMWGDNSE 169
Query: 183 GQMGINN-SNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAVQLDS 241
GQ+G+ N SN V PQ+V + P++ I+CG HS ++ + LY FG +L
Sbjct: 170 GQIGLKNVSNVCV--PQQV--TIGKPVSWISCGYYHSAFVT-TDGELYVFGEPENGKLGL 224
Query: 242 PKSV---HKTPQLI 252
P + H+TPQL+
Sbjct: 225 PNQLLGNHRTPQLV 238
Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 49/133 (36%), Gaps = 41/133 (30%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G +HS + GE++ +G +G+LGL + + P+ V + V+Q G H +
Sbjct: 198 GYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTV 256
Query: 63 VLTSTT----------------------------------------GLWHSLALNDCGEV 82
VLT G H+ + D G +
Sbjct: 257 VLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLM 316
Query: 83 FTWGGDTHGQLGL 95
+T+G HG+LGL
Sbjct: 317 YTFGDGRHGKLGL 329
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 108/243 (44%), Gaps = 56/243 (23%)
Query: 15 EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS-VSVVQACAGYSHCLVLTSTTGLWHS 73
EV+ WGG +S P+++ + S S Q CAG +H V+T
Sbjct: 348 EVYVWGG--------------GKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEK----- 388
Query: 74 LALNDCGEVFTW-----GGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 128
E++TW G HGQLG DK S PK V+ L ++ Q G +
Sbjct: 389 -------ELYTWVNMQGGTKLHGQLG--HGDKASYRQPKHVEKLQGKAIRQVSCGDDFTV 439
Query: 129 VLTSSGVVTCTHKEN-GC-GSDPSQGVQ-----------SNLVQ-----DSHTTITSLNS 170
+T G + + GC G D G + SN V+ D+H + + N
Sbjct: 440 CVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK 499
Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYA 230
E+Y+WG EYG++G+++ T PQ+V+ L I + CG + +F+L++S ++ A
Sbjct: 500 --EVYSWGCGEYGRLGLDSEEDYYT-PQKVDVPKALIIVAVQCGCDGTFLLTQS-GKVLA 555
Query: 231 FGI 233
G+
Sbjct: 556 CGL 558
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 95/260 (36%), Gaps = 54/260 (20%)
Query: 15 EVFTW-----GGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTG 69
E++TW G HGQLG DK S PK V+ L ++ Q G + +T
Sbjct: 389 ELYTWVNMQGGTKLHGQLG--HGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVT---- 442
Query: 70 LWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLV 129
D G+++ +G D +G +G++ P ++ S V Q G +H +V
Sbjct: 443 --------DEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVV 494
Query: 130 LTSSGVVTCTHKENGCGSDPSQGVQSN------------------LVQDSHTTITSLNSP 171
LT + V GCG G+ S VQ L
Sbjct: 495 LTRNKEVYSW----GCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQS 550
Query: 172 GELYTWGNNEYGQMGINNSNTTVTKPQR------------VESLVNLPIALIACGANHSF 219
G++ G NE+ ++G+N + + + + L I IA G H+
Sbjct: 551 GKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTA 610
Query: 220 VLSKSVSRLYAFGIGSAVQL 239
+ + RL FG QL
Sbjct: 611 AIDER-GRLLTFGCNKCGQL 629
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 110/257 (42%), Gaps = 78/257 (30%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
HSL + G++++WG + GQLG D K P+ ++ L+ ++V A G +H
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLG--HGDTKRVEAPRLIEALSHEAIVLAACGRNH----- 211
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYS 125
+LAL D G VF +G + GQLGL ++ ++P S
Sbjct: 212 -------TLALTDTGSVFAFGENKMGQLGL---GNQTDAVP------------------S 243
Query: 126 HCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
++ + +T + CG++ S ++ G LY++G EYGQ+
Sbjct: 244 PAQIMYNGQPIT----KMACGAEFS---------------MLMDCKGNLYSFGCPEYGQL 284
Query: 186 GINNSNTTVTKPQRVE-----------------------SLVNLPIALIACGANHSFVLS 222
G N+ + + QR+E + N+ + +ACGANH+ VL
Sbjct: 285 GHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLD 344
Query: 223 KSVSRLYAFGIGSAVQL 239
S R++++G G +L
Sbjct: 345 -SQKRVFSWGFGGYGRL 360
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 65/165 (39%), Gaps = 38/165 (23%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK--GLASVSVVQACAGYSH 60
G H+L L+ VF+WG +G+LG A++K + +P+ VK Q AGY+
Sbjct: 336 GANHTLVLDSQKRVFSWGFGGYGRLG--HAEQKDEMVPRLVKLFDFPGRGATQIYAGYTC 393
Query: 61 CLVLTSTTGLWHSLALND-----------------------CGE----------VFTWG- 86
++ GL+ A N CG+ +WG
Sbjct: 394 SFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGP 453
Query: 87 GDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
T G+LG KS + + VK L + Q GYSH LV+
Sbjct: 454 SPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIA 498
>sp|P21827|RCC1_YEAST Guanine nucleotide exchange factor SRM1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SRM1 PE=1 SV=1
Length = 482
Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 117/279 (41%), Gaps = 54/279 (19%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ---------------------SIPK 41
G H+LAL++ V++WG + G LG ++++ K Q S P
Sbjct: 92 GGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPA 151
Query: 42 RVKGLASVSVVQACAGYSHCLV-LTSTTGLWHSLALNDCGEVFTWGG--DTHGQLGLESA 98
++ + + + H +V L +T + S AL GEV+ WG G LG
Sbjct: 152 KIPRESFPPLAEG-----HKVVQLAATDNM--SCALFSNGEVYAWGTFRCNEGILGFYQD 204
Query: 99 DKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTC--THKENGCGS--------- 147
K Q P +V + ++VQ G H L L G+V ++N G
Sbjct: 205 KIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLK 264
Query: 148 --DPSQ-GVQS-NLVQDSHTTITSLNSPGELYTWGNNEYGQMGINNS---NTTVTKPQRV 200
DP G++ + +L +L +WG N++GQ G++ VTKP+R+
Sbjct: 265 TLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRL 324
Query: 201 ESLVNLPIALIACGANHSFVLSK-----SVSRLYAFGIG 234
N+ I IA G +HS +LS+ S RL F +G
Sbjct: 325 ALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVG 363
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 93/244 (38%), Gaps = 45/244 (18%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADK-KSQSIPKRVKGLASVSVVQACAGYSHCLVL 64
H L L++ G VF WG QLG + ++ + +++ R GL V + +G +HC L
Sbjct: 232 HILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYI--ASGENHCFAL 289
Query: 65 TSTTGLWHSLALNDCGEVFTWGGDTHGQLGL--ESADKKSQSIPKRVKGLASVSVVQACA 122
T L +WG + GQ G+ + D + PKR+ +V + A
Sbjct: 290 TKDNKL------------VSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAA 337
Query: 123 GYSHCLVLTSSG-VVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGEL------- 174
G H L+L+ G + +C + P + +D H ++ P +L
Sbjct: 338 GEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFK 397
Query: 175 ------------------YTWGNNEYGQMGINNSNTTVTKPQRVESLV--NLPIALIACG 214
Y+WG E +G+ P R+++ + I L+ CG
Sbjct: 398 SVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVPTRIKNTATQDHNIILVGCG 457
Query: 215 ANHS 218
S
Sbjct: 458 GQFS 461
Score = 40.8 bits (94), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 128/338 (37%), Gaps = 84/338 (24%)
Query: 15 EVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSL 74
++F WG + +LGL K + R+ + +++ G H+L
Sbjct: 47 DIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAK---------IISFAVGGMHTL 97
Query: 75 ALNDCGEVFTWGGDTHGQLGLESADKKSQ------------------------------S 104
AL++ V++WG + G LG ++++ K Q S
Sbjct: 98 ALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRES 157
Query: 105 IPKRVKGLASVSVVQ----ACAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQS----- 155
P +G V + +CA +S+ V + G C G D + ++
Sbjct: 158 FPPLAEGHKVVQLAATDNMSCALFSNGEVY-AWGTFRCNEGILGFYQDKIKIQKTPWKVP 216
Query: 156 -----NLVQ--DSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPI 208
N+VQ I L+ G ++ WGN + Q+G V + R+++L P
Sbjct: 217 TFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLG-----RKVMERFRLKTLDPRPF 271
Query: 209 AL-----IACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQLIHGPWIASPVAM 263
L IA G NH F L+K ++L ++G+ Q + V G + P +
Sbjct: 272 GLRHVKYIASGENHCFALTKD-NKLVSWGLNQFGQCGVSEDVED------GALVTKPKRL 324
Query: 264 TAGEDSLVSHSGGLVVKKIYSGGDHSIVTVTKSSDGVL 301
++ +V++ I +G HS++ S DG L
Sbjct: 325 ALPDN--------VVIRSIAAGEHHSLIL---SQDGDL 351
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 43/220 (19%)
Query: 72 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
HSL + G++++WG + GQLG D K +PK ++ L V A G +H L LT
Sbjct: 152 HSLLITVEGKLWSWGRNDKGQLG--HGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALT 209
Query: 132 SSGVVTCTHKENGCGS-----------DPSQ----GVQSNLVQDSHTTITSLNSPGELYT 176
+G V EN G P+Q G V ++ G LY+
Sbjct: 210 ENGSVYA-FGENKMGQLGLGNKTDAVPSPAQILYNGQPITKVACGAEFSMIMDCKGNLYS 268
Query: 177 WGNNEYGQMGINNSNTTVTKPQRVE---SLVNLPIAL--------------------IAC 213
+G EYGQ+G N+ + + QR+E L+ IA+ IAC
Sbjct: 269 FGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIAC 328
Query: 214 GANHSFVLSKSVSRLYAFGIGSAVQLD-SPKSVHKTPQLI 252
G NHS +L S R++++G G +L S + P+L+
Sbjct: 329 GINHSLILD-SQKRVFSWGFGGYGRLGHSEQRDEMVPRLV 367
Score = 37.0 bits (84), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 64/165 (38%), Gaps = 38/165 (23%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVK--GLASVSVVQACAGYSH 60
G+ HSL L+ VF+WG +G+LG ++++ + +P+ VK Q AG +
Sbjct: 329 GINHSLILDSQKRVFSWGFGGYGRLG--HSEQRDEMVPRLVKLFDFPGRGAAQIYAGATC 386
Query: 61 CLVLTSTTGLWHSLALND-----------------------CGE----------VFTWG- 86
++ GL+ A N CG+ +WG
Sbjct: 387 SFAVSEMGGLFFWGATNTSRDSTMYPKAVQDLCGWKVRSLACGKSSIIVAADESTISWGP 446
Query: 87 GDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 131
T G+LG KS + + VK L + Q G SH LV+
Sbjct: 447 SPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQVIMGNSHTLVVA 491
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 149/347 (42%), Gaps = 60/347 (17%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G H+LAL + G V+ +G + GQLGL + K+ ++P + L Y+
Sbjct: 201 GRNHTLALTENGSVYAFGENKMGQLGLGN---KTDAVPSPAQIL-----------YNGQP 246
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+ G S+ ++ G ++++G +GQLG S D K + +R++
Sbjct: 247 ITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNS-DGKYIARAQRIE------------ 293
Query: 123 GYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEY 182
Y L+ + K+ P+ V+ +H+ I L+S +++WG Y
Sbjct: 294 -YDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLI--LDSQKRVFSWGFGGY 350
Query: 183 GQMGINNSNTTVTKPQRVESLVNLP---IALIACGANHSFVLSKSVSRLYAFGIGSAVQL 239
G++G + + R+ L + P A I GA SF +S+ + L+ +G +
Sbjct: 351 GRLGHSEQRDEMVP--RLVKLFDFPGRGAAQIYAGATCSFAVSE-MGGLFFWGA-TNTSR 406
Query: 240 DS---PKSVHKTPQLIHGPWIASPVA------MTAGEDSLVSHSGGLVVKKIYSGGDHSI 290
DS PK+V Q + G W +A + A ++S +S ++ G + +
Sbjct: 407 DSTMYPKAV----QDLCG-WKVRSLACGKSSIIVAADESTISWGPSPTFGELGYGDNKAK 461
Query: 291 VTVT----KSSDGVLSDDFRVLNPATQILDVNFERLKECEREVEQLK 333
+ T K+ DG+ SD + N T ++ + E E++ E+LK
Sbjct: 462 SSTTAQEVKTLDGIYSDQVIMGNSHTLVVARD-----ETEQDKEKLK 503
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 122/281 (43%), Gaps = 52/281 (18%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G S + D G +FT+G HG+LGL QS PK V+ L ++ +G H L
Sbjct: 346 GTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSL 405
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLAS-------- 114
VLT+ G VF++G + GQLG+ + Q+IPK+++ +
Sbjct: 406 VLTNK------------GLVFSFGRNDQGQLGIGCFSNQ-QTIPKQIQWFQTSQQQQQQP 452
Query: 115 VSVVQACAGYSHCLVLTSS-----------GVVTCTHKENGCGSDPSQGVQSNLVQDS-- 161
+++++ AG H + ++ + GV+ + G + P +++V D+
Sbjct: 453 INIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVK 512
Query: 162 ---------HTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQR--VESLVNLPIAL 210
H S++ G LY+WG N ++G + +T P++ + S + P+ L
Sbjct: 513 FIDVSSGFQHNVAMSID--GSLYSWGCNAGQRLGFKSDENQLT-PKKCFINSKDSKPL-L 568
Query: 211 IACGANHSFVLSKSVSRLYAFGIGSAVQLDSPKSVHKTPQL 251
CG + ++ K R I + +QL S + +L
Sbjct: 569 FTCGEIITIIVEK---RFKEPIIKTELQLPSSTQSQQQTEL 606
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 120/305 (39%), Gaps = 78/305 (25%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQS-IPKRVK---------------- 44
G HSLAL CG+V++WGG+ QLGL + S +P+ +
Sbjct: 250 NGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNNNNS 309
Query: 45 ------------GLASVSVVQACAGYSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQ 92
+ + + ++ + G S + D G +FT+G HG+
Sbjct: 310 TNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGR 369
Query: 93 LGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSSGVVTCTHKEN------GCG 146
LGL QS PK V+ L ++ +G H LVLT+ G+V + + GC
Sbjct: 370 LGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCF 429
Query: 147 SD----PSQGVQS-----------NLVQDS----HTTITSLNSPGELYTWGNNEYGQMGI 187
S+ P Q N+++ S H+ S N+ + Y WG ++YG +G
Sbjct: 430 SNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNN--DTYAWGRSDYGVLGT 487
Query: 188 N-------------NSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
+ NSN+ V N+ ++ G H+ +S S LY++G
Sbjct: 488 SIDVQGDRNLPVLINSNSVVVD--------NVKFIDVSSGFQHNVAMSIDGS-LYSWGCN 538
Query: 235 SAVQL 239
+ +L
Sbjct: 539 AGQRL 543
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 111/242 (45%), Gaps = 16/242 (6%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
TG HS + D G ++T+G G+LG + +S S PK V+ + ++
Sbjct: 195 TGAIHSSFITDQGNLYTFGDGLLGKLG--HGNLESYSSPKLVEFFQTKPSLR-------- 244
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESA-DKKSQSIPKRVKGLASVSVVQA 120
V++ G HSLAL CG+V++WGG+ QLGL + S+P+ + S +
Sbjct: 245 -VVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNN 303
Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITS--LNSPGELYTWG 178
+ ++ + + + S + +V+ S T S + G L+T+G
Sbjct: 304 NNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFG 363
Query: 179 NNEYGQMGINNSNTTV-TKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
++G++G+ + + + P+ V+SL I ++ G HS VL+ +++FG
Sbjct: 364 RGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNK-GLVFSFGRNDQG 422
Query: 238 QL 239
QL
Sbjct: 423 QL 424
Score = 37.0 bits (84), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 58 YSHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLA---S 114
Y+ ++ +TG HS + D G ++T+G G+LG + +S S PK V+ S
Sbjct: 185 YNQQKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLG--HGNLESYSSPKLVEFFQTKPS 242
Query: 115 VSVVQACAGYSHCLVLTSSGVVTCTHKENGC 145
+ VV G H L LT G V + C
Sbjct: 243 LRVVSIANGGKHSLALTICGKVYSWGGNDSC 273
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 94/232 (40%), Gaps = 55/232 (23%)
Query: 15 EVFTWGGDTHGQLGLESADKKSQSIPKRVKGL-ASVSVVQACAGYSHCLVLTSTTGLWHS 73
EV+ WGG ++ P+++ Q CAG +H V+T
Sbjct: 330 EVYVWGG--------------GKTTPQKLDVFKGGWRARQVCAGDAHFAVVTVEK----- 370
Query: 74 LALNDCGEVFTW-----GGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 128
E++TW G HGQLG D+ S PK V+ L SV + G +
Sbjct: 371 -------ELYTWVNMQGGSKLHGQLG--HGDRASYRQPKHVEKLQGKSVQKVSCGSDFTV 421
Query: 129 VLTSSGVV--------TCTHKENGCGSDP----------SQGVQSNLVQDSHTTITSLNS 170
+T G + C GS+ ++ V DSH I +L
Sbjct: 422 CITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSH--IMALTR 479
Query: 171 PGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLS 222
+Y+WG EYG++G++ S V PQ+VE L I + CG++ SF+L+
Sbjct: 480 SKSVYSWGCGEYGRLGLD-SEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLT 530
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 87/210 (41%), Gaps = 41/210 (19%)
Query: 7 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
++ + D G+++++G D +G LG+ + P V + V Q G SH + LT
Sbjct: 420 TVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTR 479
Query: 67 TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
+ V++WG +G+LGL+S D P++V+ + +V C G
Sbjct: 480 SK------------SVYSWGCGEYGRLGLDSEDDVYS--PQKVEVQRGLCIVNVCCGSDG 525
Query: 127 CLVLTSSG-VVTC---THKENGCGSDPSQGVQSNLVQD---------------------- 160
+LT +G V+ C H + G + + Q+
Sbjct: 526 SFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSIS 585
Query: 161 -SHTTITSLNSPGELYTWGNNEYGQMGINN 189
T +++ G L T+G+N+ GQ+G+ +
Sbjct: 586 PGRTHTAAIDERGRLLTFGSNKCGQLGVGD 615
Score = 41.6 bits (96), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 93/256 (36%), Gaps = 55/256 (21%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLT 65
H +AL V++WG +G+LGL+S D P++V+ + +V C G +LT
Sbjct: 473 HIMALTRSKSVYSWGCGEYGRLGLDSEDDVYS--PQKVEVQRGLCIVNVCCGSDGSFLLT 530
Query: 66 STTGLWHSLALNDCGEVFTWGGDTHGQLGLES------ADKKSQSIP-----KRVKGLAS 114
T G+V G + H +LGL + Q +P K L+
Sbjct: 531 LT------------GKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSF 578
Query: 115 VSVVQACAGYSHCLVLTSSGVVTCTHKENGCG----------------SDPSQGVQSNLV 158
+ G +H + G + T N CG P G Q V
Sbjct: 579 YKIRSISPGRTHTAAIDERGRLL-TFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRV 637
Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLP---------IA 209
T+ + ++ WGN G++ + T +PQ + + P +
Sbjct: 638 SCGDEFTTAATADNHIFAWGNGGNGRLAM----TPNERPQGSDICTSWPRPIFGSLHHVT 693
Query: 210 LIACGANHSFVLSKSV 225
++C H+ ++ + V
Sbjct: 694 DLSCRGWHTILIVEKV 709
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 120/308 (38%), Gaps = 53/308 (17%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
TG H +AL G+V+TWG QLG +++ R++GL +
Sbjct: 233 TGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERR------RLQGLTPQPLALKN------ 280
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSI---PKRVKGLASVSVV 118
+++ G +HS A+++ G V+ WG + Q G+E D++ ++ P V L +V
Sbjct: 281 -IISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVK 339
Query: 119 QACAGYSHCLVLTSSGVVTCTHKEN----GCGSDPSQGVQSNLVQDSHTTITSLNSP--- 171
G H L L G V +++ G P + +V+D L++P
Sbjct: 340 SITGGEHHTLALLEDGRVLAWGRDDRHQLGI---PDNALPETVVKDEKGNNYYLSTPTII 396
Query: 172 ----------------------GELYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIA 209
G++Y+WG+ E ++G +++ V P V S +A
Sbjct: 397 PGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTLVRSKAIKEVA 456
Query: 210 LIACGANHSFVLSKSVSRL----YAFGIGSAVQLDSPKSVHKTPQLIHGPWI-ASPVAMT 264
+ GA F + + A GI S + + +T + P A P +
Sbjct: 457 IRVAGAGGQFSIIAGIPNASEEPVANGIKSEPENEKKLKTEETSKTDDSPVTDAKPDVTS 516
Query: 265 AGEDSLVS 272
GE S +
Sbjct: 517 NGEPSTAT 524
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 109/278 (39%), Gaps = 61/278 (21%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS AL+ G V+TWG + LG + D+K ++ K L + + SH
Sbjct: 116 GGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLR 175
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGG--DTHGQLGLESADKKSQSIPKRVKGLASVSVVQA 120
V + A+ D G FTWG + G LG + K++ P +++ + Q
Sbjct: 176 VTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAE-PTQMR---LPEICQL 231
Query: 121 CAGYSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNN 180
G H + LT++G V YTWGN
Sbjct: 232 ATGTDHIIALTTTGKV--------------------------------------YTWGNG 253
Query: 181 EYGQMGINNSNTTVTKPQRVESLVNLPIAL-----IACGANHSFVLSKSVSRLYAFGI-- 233
+ Q+G + + +R++ L P+AL + G+ HSF + R+YA+G+
Sbjct: 254 QQFQLG-----RRMLERRRLQGLTPQPLALKNIISVGAGSYHSFAIDNK-GRVYAWGLNI 307
Query: 234 ----GSAVQLDSPKSVHKTPQLIHGPWIASPVAMTAGE 267
G V+ + +V P L+ + ++T GE
Sbjct: 308 TRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGE 345
>sp|Q9V853|SMUF1_DROME E3 ubiquitin-protein ligase Smurf1 OS=Drosophila melanogaster GN=lack
PE=1 SV=3
Length = 1061
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 14/90 (15%)
Query: 975 LQTFNPHTLNQYLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRG 1034
LQT P + + +EVSR+ I E++ R + + D +K L VKF+G
Sbjct: 692 LQTMQPQS--GHCRLEVSRNEIFEESYRLIMKMRAKDMRKRL------------MVKFKG 737
Query: 1035 EEAEDAGGVRREFLMLLLKEILDPKYGMFK 1064
EE D GGV RE+L LL +E+L+P+YG+F+
Sbjct: 738 EEGLDYGGVAREWLHLLSREMLNPQYGLFQ 767
Score = 37.4 bits (85), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 33/54 (61%)
Query: 746 LIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILD 799
+G G+A+++ ++ F YK++L++PI L D++ + P L +SL +L+
Sbjct: 794 FVGRTLGIAVFHGHCLDGGFTTPFYKQLLNKPITLGDIEGVDPDLHRSLTWMLE 847
>sp|Q9PUN2|SMUF1_XENLA E3 ubiquitin-protein ligase SMURF1 OS=Xenopus laevis GN=smurf1 PE=2
SV=1
Length = 731
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 12/79 (15%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
+ VEVSR+ I E++ R++ + D KK L VKFRGEE D GGV R
Sbjct: 372 HCRVEVSREEIFEESYRQIMKMRPKDLKKRL------------MVKFRGEEGLDYGGVAR 419
Query: 1046 EFLMLLLKEILDPKYGMFK 1064
E+L LL E+L+P YG+F+
Sbjct: 420 EWLYLLCHEMLNPYYGLFQ 438
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 746 LIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILDYREPDL 805
+G + GLA+++ IN F + YK++L +PI L DL+ + P L KSL IL E D+
Sbjct: 465 FVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWIL---ENDI 521
Query: 806 EDVFGITF 813
V TF
Sbjct: 522 TSVLDHTF 529
>sp|Q9HCE7|SMUF1_HUMAN E3 ubiquitin-protein ligase SMURF1 OS=Homo sapiens GN=SMURF1 PE=1
SV=2
Length = 757
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 12/79 (15%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
+ +EVSR+ I E++ R++ + D KK L VKFRGEE D GGV R
Sbjct: 398 HCRIEVSREEIFEESYRQIMKMRPKDLKKRL------------MVKFRGEEGLDYGGVAR 445
Query: 1046 EFLMLLLKEILDPKYGMFK 1064
E+L LL E+L+P YG+F+
Sbjct: 446 EWLYLLCHEMLNPYYGLFQ 464
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 746 LIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILDYREPDL 805
+G + GLA+++ IN F + YK++L +PI L DL+ + P L KSL IL E D+
Sbjct: 491 FVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWIL---ENDI 547
Query: 806 EDVFGITF 813
V TF
Sbjct: 548 TPVLDHTF 555
>sp|Q9CUN6|SMUF1_MOUSE E3 ubiquitin-protein ligase SMURF1 OS=Mus musculus GN=Smurf1 PE=2
SV=2
Length = 731
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 12/79 (15%)
Query: 986 YLEVEVSRDNIVEDTIRELAQYTTNDFKKPLKVNDTSPIYLAPQVKFRGEEAEDAGGVRR 1045
+ +EVSR+ I E++ R++ + D KK L VKFRGEE D GGV R
Sbjct: 372 HCRIEVSREEIFEESYRQIMKMRPKDLKKRL------------MVKFRGEEGLDYGGVAR 419
Query: 1046 EFLMLLLKEILDPKYGMFK 1064
E+L LL E+L+P YG+F+
Sbjct: 420 EWLYLLCHEMLNPYYGLFQ 438
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 746 LIGTLCGLAIYNYTIINMPFPLALYKKILDEPILLQDLKDLSPTLAKSLQDILDYREPDL 805
+G + GLA+++ IN F + YK++L +PI L DL+ + P L KSL IL E D+
Sbjct: 465 FVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWIL---ENDI 521
Query: 806 EDVFGITF 813
V TF
Sbjct: 522 TPVLDHTF 529
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 45/222 (20%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG--LASVSVVQACAGYSHCLV 63
HS +L D GE++ WG + HGQL ++ +P+R++ V +G++H +
Sbjct: 223 HSASLTDTGELYVWGRNKHGQL---ASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVA 279
Query: 64 LTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAG 123
T T G+VFTWG +GQLG ++Q ++ LA +
Sbjct: 280 KTET------------GKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPS 327
Query: 124 YSHCLVLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYG 183
HCL + E CGS+ + V ++D + +WG NE+G
Sbjct: 328 PLHCLTGAT---------EISCGSEHNLAV----IRD------------KCCSWGWNEHG 362
Query: 184 QMGINNSNTTVTKPQRVESLVNLP--IALIACGANHSFVLSK 223
G + + + V P V++L P + L+ CGA HS + +
Sbjct: 363 MCG-DGTESNVWTPTPVQALPPSPSRLLLVGCGAGHSLAVCQ 403
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 41/222 (18%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQACAGYSHC 61
G HS + D G++F G + GQLGL ++ + +I K ++G + Q G+
Sbjct: 57 GGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRG---CPIRQVACGWDFT 113
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
++LT G+V + G + GQLG+ +K +P+ ++ L VV
Sbjct: 114 IMLTEK------------GQVLSCGSNAFGQLGVPHGPRKC-VVPQAIECLRE-KVVCVA 159
Query: 122 AGYSHCLVLTSSGVV---TCTHKENGCGSDPSQGVQSNLVQDSHTTIT------------ 166
AG H L T++G V +G P Q + L + +T
Sbjct: 160 AGLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVA 219
Query: 167 ------SLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVES 202
SL GELY WG N++GQ+ + + PQR+E+
Sbjct: 220 GSDHSASLTDTGELYVWGRNKHGQLA--SRAVFLPLPQRIEA 259
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 104/258 (40%), Gaps = 38/258 (14%)
Query: 16 VFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTSTTGLWHSLA 75
+F WG +++GQLGL K+ +P+++ +++ G G HS
Sbjct: 17 LFAWGANSYGQLGL--GHKEDVFLPQQLSDFCQAGCIKSVTG-----------GGGHSAV 63
Query: 76 LNDCGEVFTWGGDTHGQLGLESADKKSQ-SIPKRVKGLASVSVVQACAGYSHCLVLTSSG 134
+ D G++F G + GQLGL ++ + +I K ++G + Q G+ ++LT G
Sbjct: 64 VTDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRG---CPIRQVACGWDFTIMLTEKG 120
Query: 135 -VVTCTHK---ENGCGSDPSQGVQSNLVQDSHTTIT----------SLNSPGELYTWGNN 180
V++C + G P + V ++ + + + G ++ WG
Sbjct: 121 QVLSCGSNAFGQLGVPHGPRKCVVPQAIECLREKVVCVAAGLRHALATTATGSVFQWGTG 180
Query: 181 --EYGQMGINNSN----TTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIG 234
G+ N T +P RV L N G++HS L+ + LY +G
Sbjct: 181 LASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDT-GELYVWGRN 239
Query: 235 SAVQLDSPKSVHKTPQLI 252
QL S PQ I
Sbjct: 240 KHGQLASRAVFLPLPQRI 257
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 2 TGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHC 61
+G H +A + G+VFTWG +GQLG ++Q ++ LA + HC
Sbjct: 272 SGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHC 331
Query: 62 LVLTS--TTGLWHSLA-LNDCGEVFTWGGDTHGQLG 94
L + + G H+LA + D + +WG + HG G
Sbjct: 332 LTGATEISCGSEHNLAVIRD--KCCSWGWNEHGMCG 365
>sp|O74881|BTB1_SCHPO BTB/POZ domain-containing protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=btb1 PE=1 SV=1
Length = 1347
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 20/142 (14%)
Query: 6 HSLALNDCGEVFTWGGDTHGQLGLESADKKS----QSIPKRVKGLASVSVVQACAGYSHC 61
HSLAL G +++WG + G+LGL + + K Q P+R+ ++ AG S+
Sbjct: 258 HSLALTKFGSIYSWGKNGSGELGLSNDELKKDDPIQITPRRISAFKDYQIIGMAAGKSYS 317
Query: 62 LVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQAC 121
+ T T ++++WG + +GQLG+ S S P+RV GL S + C
Sbjct: 318 VAWTDT-------------DIYSWGLN-NGQLGI-SDHISVVSTPRRVAGLLSPVIHAVC 362
Query: 122 AGYSH-CLVLTSSGVVTCTHKE 142
+ CL+ +S + C + +
Sbjct: 363 TTRATICLLQNNSIIAFCNYNQ 384
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 39/215 (18%)
Query: 80 GEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVS-------------VVQACAGYSH 126
E++ +G + + LG+ A+ K S P+RV L + + ++ A H
Sbjct: 149 NELYGFGTNVNNTLGI--ANGKEPSSPERVFLLKNQTESPTSGQLFSRDKILDVQASKFH 206
Query: 127 CLVLT---SSGVVTC---THKENGCGSD------PSQGVQSNLVQDS--HTTITSLNSPG 172
+VLT S V C G +D P G+ ++Q S HT +L G
Sbjct: 207 SVVLTDEPSQNVYVCGIGAGGRIGFNTDVQYNFIPIPGIIHKVIQISVSHTHSLALTKFG 266
Query: 173 ELYTWGNNEYGQMGINN-----SNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSR 227
+Y+WG N G++G++N + P+R+ + + I +A G ++S + +
Sbjct: 267 SIYSWGKNGSGELGLSNDELKKDDPIQITPRRISAFKDYQIIGMAAGKSYSVAWTD--TD 324
Query: 228 LYAFGIGSA-VQLDSPKSVHKTPQLIHGPWIASPV 261
+Y++G+ + + + SV TP+ + G + SPV
Sbjct: 325 IYSWGLNNGQLGISDHISVVSTPRRVAG--LLSPV 357
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 103/251 (41%), Gaps = 46/251 (18%)
Query: 1 MTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKG--LASVSVVQACAGY 58
+ G HS +L D GE++ WG + HGQL ++A +P+R++ + + +G+
Sbjct: 218 LAGSDHSASLTDAGELYVWGSNKHGQLASQAAFLL---LPQRIEARCFQNEKIAAVWSGW 274
Query: 59 SHCLVLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVV 118
+H + T T G+VFTWG +GQLG ++ K+ L
Sbjct: 275 THLVAQTVT------------GKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQ 322
Query: 119 QACAGYSHCL-VLTSSGVVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTW 177
+ G CL LT + ++C G + NL G ++W
Sbjct: 323 K---GTPSCLPCLTGATEISC-------------GSEHNLAVIG----------GVCHSW 356
Query: 178 GNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSAV 237
G NE+G G + + V P+ V L + CGA HS L + + L A G +V
Sbjct: 357 GWNEHGMCG-DGTEADVWAPKPVPGLRFFLGLHVGCGAGHSLALCQ-LPALPALGQHPSV 414
Query: 238 QLDSPKSVHKT 248
SP + +
Sbjct: 415 TSPSPDATKEA 425
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 106/263 (40%), Gaps = 48/263 (18%)
Query: 3 GLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCL 62
G HS + D G +F G + GQLGL ++ P K L ++ Q G+ +
Sbjct: 57 GGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTP--CKSLLGCAIQQVACGWDFTI 114
Query: 63 VLTSTTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACA 122
+LT G+V + G ++ GQLG+ ++ IP+ ++ L VV A
Sbjct: 115 ILTEN------------GQVLSCGSNSFGQLGVPHGPRRC-VIPQAIE-LLREKVVSIAA 160
Query: 123 GYSHCLVLTSSGVV------------------------TCTHKENGCGSDPSQGVQSNLV 158
G H L T+SG V T G + SQ V L
Sbjct: 161 GLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAV-CVLA 219
Query: 159 QDSHTTITSLNSPGELYTWGNNEYGQMGINNSNTTVTKPQRVES--LVNLPIALIACGAN 216
H+ SL GELY WG+N++GQ+ + + PQR+E+ N IA + G
Sbjct: 220 GSDHS--ASLTDAGELYVWGSNKHGQLA--SQAAFLLLPQRIEARCFQNEKIAAVWSGWT 275
Query: 217 HSFVLSKSVSRLYAFGIGSAVQL 239
H V +++ +G QL
Sbjct: 276 H-LVAQTVTGKVFTWGRADYGQL 297
Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 90/231 (38%), Gaps = 57/231 (24%)
Query: 7 SLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSHCLVLTS 66
S A+ +F WG +++GQLGL + L++ + C S C+
Sbjct: 8 SEAVPTAAALFAWGANSYGQLGLGHKEDV----------LSAQQLSDFC--KSGCIKRI- 54
Query: 67 TTGLWHSLALNDCGEVFTWGGDTHGQLGLESADKKSQSIPKRVKGLASVSVVQACAGYSH 126
T G HS + D G +F G + GQLGL ++ P K L ++ Q G+
Sbjct: 55 TGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTP--CKSLLGCAIQQVACGWDF 112
Query: 127 CLVLTSSG-VVTCTHKENGCGSDPSQGVQSNLVQDSHTTITSLNSPGELYTWGNNEYGQM 185
++LT +G V++C G+N +GQ+
Sbjct: 113 TIILTENGQVLSC---------------------------------------GSNSFGQL 133
Query: 186 GINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGIGSA 236
G+ + PQ +E L+ + IA G H+ + S ++ +G G A
Sbjct: 134 GVPHGPRRCVIPQAIE-LLREKVVSIAAGLRHALAATAS-GTVFQWGTGLA 182
Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 174 LYTWGNNEYGQMGINNSNTTVTKPQRVESLVNLPIALIACGANHSFVLSKSVSRLYAFGI 233
L+ WG N YGQ+G+ + ++ Q + + I I G HS V++ S L+ G+
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGS-LFVCGL 75
Query: 234 GSAVQL 239
QL
Sbjct: 76 NKDGQL 81
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 430,323,635
Number of Sequences: 539616
Number of extensions: 18445891
Number of successful extensions: 42298
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 40896
Number of HSP's gapped (non-prelim): 658
length of query: 1149
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1020
effective length of database: 121,958,995
effective search space: 124398174900
effective search space used: 124398174900
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)